BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254781031|ref|YP_003065444.1| exsB protein [Candidatus
Liberibacter asiaticus str. psy62]
         (240 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done



>gi|254781031|ref|YP_003065444.1| exsB protein [Candidatus Liberibacter asiaticus str. psy62]
 gi|254040708|gb|ACT57504.1| exsB protein [Candidatus Liberibacter asiaticus str. psy62]
          Length = 240

 Score =  227 bits (577), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 240/240 (100%), Positives = 240/240 (100%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI
Sbjct: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA
Sbjct: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET
Sbjct: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
           WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD
Sbjct: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240


>gi|315122371|ref|YP_004062860.1| exsB protein [Candidatus Liberibacter solanacearum CLso-ZC1]
 gi|313495773|gb|ADR52372.1| exsB protein [Candidatus Liberibacter solanacearum CLso-ZC1]
          Length = 243

 Score =  214 bits (544), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 195/239 (81%), Positives = 219/239 (91%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN+  +K  SALLLFSGGQDSSTCLSWALD+FD+VETLSFDYGQRNKVELECRL +R+KI
Sbjct: 1   MNNNREKTSSALLLFSGGQDSSTCLSWALDKFDKVETLSFDYGQRNKVELECRLRLREKI 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           V+L PKWKDSLG DHILPLA LGDISHSSLTKN+ +KIQ+NNLPNTFVPGRNIIFLVFAA
Sbjct: 61  VQLTPKWKDSLGADHILPLATLGDISHSSLTKNIEIKIQENNLPNTFVPGRNIIFLVFAA 120

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            LAYR GITNI+ G+CE DYSGYPDCR++TI+A+E  +NLGMES+ T+HTPLM LKK+ET
Sbjct: 121 ALAYRRGITNIIAGMCEMDYSGYPDCRNETIKALEMTLNLGMESNFTIHTPLMHLKKHET 180

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           WKL QDIGGQ+LV+LILEESHTCYLG RDKRYEWGYGCNSCP+C LRQKGW+EFKEKYQ
Sbjct: 181 WKLVQDIGGQNLVDLILEESHTCYLGTRDKRYEWGYGCNSCPSCNLRQKGWVEFKEKYQ 239


>gi|48428738|gb|AAT42387.1| putative PP-loop superfamily ATPase [Collimonas fungivorans Ter331]
          Length = 236

 Score =  209 bits (531), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 125/231 (54%), Positives = 179/231 (77%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +     A++LFSGGQDS+TCL+WAL R++RVET+ FDYGQR+ VEL  R  + +KI    
Sbjct: 1   MTTPNGAIVLFSGGQDSTTCLAWALSRYERVETIGFDYGQRHAVELTVRPVLLQKIRAQF 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
           P+W   LGEDH++ L+++  IS +++T++V + +Q+N LPNTFVPGRN++F+  AAT+AY
Sbjct: 61  PQWAGKLGEDHLIDLSLISKISSTAMTEDVEIVMQENGLPNTFVPGRNLLFMTVAATVAY 120

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           R G+  +V G+CETD+SGYPDCR DT++A++ A+NLGM + + + TPLMW+ K ETWKLA
Sbjct: 121 RRGLNVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMATQIKLETPLMWIDKSETWKLA 180

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           QD+GG  LV+LI  ++HTCYLG+R   ++WGYGC +CPAC LR +G+ +F+
Sbjct: 181 QDLGGDALVDLIRADTHTCYLGQRGALHDWGYGCGTCPACALRARGYQQFR 231


>gi|158425299|ref|YP_001526591.1| ExsB protein [Azorhizobium caulinodans ORS 571]
 gi|189038893|sp|A8IMX7|QUEC_AZOC5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|158332188|dbj|BAF89673.1| ExsB protein [Azorhizobium caulinodans ORS 571]
          Length = 241

 Score =  208 bits (528), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 133/224 (59%), Positives = 179/224 (79%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS+T L+WALDRF+RVETL FDYGQR+++EL+CR+ VR  +  L P W   
Sbjct: 11  ALVLFSGGQDSTTTLAWALDRFERVETLGFDYGQRHRIELDCRVKVRAAMAALNPAWAAK 70

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LGEDH L L  LG +S ++LT++VA+++ +  LPNTFVPGRNI+FL FAA LAYR G+ +
Sbjct: 71  LGEDHTLALDALGAVSDTALTRDVAIEMTEGGLPNTFVPGRNIVFLTFAAALAYRRGLKH 130

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G+CETD+SGYPDCR DTI+A++ A+NLGM+    + TPLMW+ K ETW+LA+ +GG+
Sbjct: 131 IVGGMCETDFSGYPDCRDDTIKALQVALNLGMDRRFVLETPLMWIDKAETWRLAERLGGR 190

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            LV+LI+E++HTCYLG+R  R+ WG+GC +CPAC LR +G+  +
Sbjct: 191 ALVDLIVEDTHTCYLGERGPRHPWGHGCGTCPACQLRAEGFARY 234


>gi|237749231|ref|ZP_04579711.1| queuosine biosynthesis protein queC [Oxalobacter formigenes OXCC13]
 gi|229380593|gb|EEO30684.1| queuosine biosynthesis protein queC [Oxalobacter formigenes OXCC13]
          Length = 246

 Score =  207 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 122/233 (52%), Positives = 174/233 (74%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           N  I+    AL+LFSGGQDS+TCL+WAL+ +D+VET+ F YGQR+ VEL  R  + +KI 
Sbjct: 7   NHSIESTKKALVLFSGGQDSTTCLAWALNHYDKVETIGFSYGQRHAVELTVRPGILQKIR 66

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
               +W   LGEDH+  L+++  +S +++T +V +++ +N LPNTFVPGRN++FL+ AA 
Sbjct: 67  NFSEEWNKKLGEDHVCDLSLISSLSETAMTSDVEIRMMENGLPNTFVPGRNLMFLMVAAM 126

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           LAYR  +  +V G+CETD+SGYPDCR D I+A++ A+N+GM++ + + TPLMW  K ETW
Sbjct: 127 LAYRRDLNVLVGGMCETDFSGYPDCRDDAIKAMQLALNIGMDARLNLVTPLMWKNKKETW 186

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           +LA ++GGQ LV+LI+ E+HTCY+G+ DK   WG+GC  CPAC LR+KG+ EF
Sbjct: 187 QLAAELGGQGLVDLIVNETHTCYVGEHDKLNTWGFGCGECPACLLRKKGFEEF 239


>gi|295688230|ref|YP_003591923.1| ExsB protein [Caulobacter segnis ATCC 21756]
 gi|295430133|gb|ADG09305.1| exsB protein [Caulobacter segnis ATCC 21756]
          Length = 243

 Score =  205 bits (520), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 126/233 (54%), Positives = 174/233 (74%), Gaps = 3/233 (1%)

Query: 5   IKKAPS---ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           +        AL+LFSGGQDSS CL+WAL+R+ RVET+ FDYGQR+ VE+E R  VR+++ 
Sbjct: 1   MSPPERTDAALVLFSGGQDSSVCLAWALERYGRVETVGFDYGQRHVVEMEARQAVRREVA 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
              P W D LGEDH+L +   G ++ S+LT + A+++ +  LP+TFVPGRN++FL++AA 
Sbjct: 61  ARFPHWADRLGEDHVLDIRSFGAVAQSALTADRAIEMTERGLPSTFVPGRNLVFLIYAAA 120

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           LA R G+  +V G+CETD+SGYPDCR DT+ A+++A+NLGM+ +  V TPLMWL K ETW
Sbjct: 121 LADRRGVDALVGGMCETDFSGYPDCRRDTLDAMQSALNLGMDRNFRVETPLMWLTKAETW 180

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            L++ +GG+DLV LI+EESHTCY G+R   + WG+GC  CPAC LR+KG+ E+
Sbjct: 181 ALSKALGGEDLVKLIVEESHTCYQGERGVLHAWGHGCGVCPACELREKGYAEW 233


>gi|237747077|ref|ZP_04577557.1| queuosine biosynthesis protein queC [Oxalobacter formigenes HOxBLS]
 gi|229378428|gb|EEO28519.1| queuosine biosynthesis protein queC [Oxalobacter formigenes HOxBLS]
          Length = 246

 Score =  204 bits (519), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 116/233 (49%), Positives = 176/233 (75%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +  +AL+LFSGGQDS+TCL+WAL  ++ VET+ F YGQR+ VELE R  + +K+ +   K
Sbjct: 12  RDKNALVLFSGGQDSTTCLAWALTHYNHVETVGFSYGQRHAVELEGRPRILEKLRQFSEK 71

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           W   LG DHI+ L+++  +S +++T  + +++ +N LPNTFVPGRN++FL  AA LAYR 
Sbjct: 72  WNRRLGADHIVDLSLISHLSETAMTTEMEIRVMENGLPNTFVPGRNLMFLTAAAMLAYRR 131

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +  +V G+CETD+SGYPDCR D ++A++ A+N+GM++ + + TPLMW  K ETW++A D
Sbjct: 132 DLNTLVGGMCETDFSGYPDCRDDAVKALQVALNIGMDTRLALLTPLMWKNKKETWQMAFD 191

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           +GGQ L+ LI+ E+HTCY+G+ ++ +EWGYGC  CPAC LR++G+ME++ + +
Sbjct: 192 LGGQKLIELIVSETHTCYIGEHNRLHEWGYGCGKCPACLLRKRGFMEYQSEKK 244


>gi|167645046|ref|YP_001682709.1| exsB protein [Caulobacter sp. K31]
 gi|189038904|sp|B0SX50|QUEC_CAUSK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|167347476|gb|ABZ70211.1| exsB protein [Caulobacter sp. K31]
          Length = 250

 Score =  204 bits (519), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 125/229 (54%), Positives = 176/229 (76%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
            +A +AL+LFSGGQDSS CL+WAL+R+ RVET+ FDYGQR+ +E+E R+ VR ++ E  P
Sbjct: 12  SRADAALVLFSGGQDSSVCLAWALERYARVETVGFDYGQRHHIEMEARVAVRHQVAERFP 71

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            W   LGEDH+L L   G ++HS+LT +VA+++ +  LP+TFVPGRN++FL++AA LA R
Sbjct: 72  HWARRLGEDHVLDLTGFGAVAHSALTADVAIEMTERGLPSTFVPGRNLVFLIYAAALADR 131

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G+  +V G+CETD+SGYPDCR DT+ A+++A+NLGM+    + TPLM L K +TW LA+
Sbjct: 132 RGLGALVGGMCETDFSGYPDCRRDTLDAMQSALNLGMDRDFVIETPLMKLTKAQTWALAK 191

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            +GG+DLV+LI+ ESHTCY G+R   + WG+GC  CPAC LR++G+ E+
Sbjct: 192 SLGGEDLVDLIVVESHTCYQGERGDLHPWGHGCGECPACELRRRGYEEW 240


>gi|114321844|ref|YP_743527.1| exsB protein [Alkalilimnicola ehrlichii MLHE-1]
 gi|122310729|sp|Q0A550|QUEC_ALHEH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|114228238|gb|ABI58037.1| preQ(0) biosynthesis protein QueC [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 238

 Score =  204 bits (518), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 134/233 (57%), Positives = 178/233 (76%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M++      +A++LFSGGQDS+TCL+WAL R+ RV T++FDYGQR++VEL CR  VR+ I
Sbjct: 1   MSETADTNQTAVVLFSGGQDSTTCLAWALARYHRVHTVAFDYGQRHRVELACRQRVREAI 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +    W   LGEDH+L L  LG+IS +SLT+  A++I+D+ LP+TFVPGRN++FL +AA
Sbjct: 61  GQHFAGWGARLGEDHLLDLTSLGEISDTSLTRERAIEIRDSGLPDTFVPGRNLLFLTYAA 120

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            LA+RL   +++ GVCETDYSGYPDCR DTI+A++ A+NLGM+SH  +HTPLMW  K +T
Sbjct: 121 ALAWRLQARHLITGVCETDYSGYPDCRDDTIKALQVALNLGMDSHFVLHTPLMWRDKAQT 180

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
           W LA+ +GG DLV LI E +HTCYLG R +R++WGYGC  CPAC LR +GW  
Sbjct: 181 WALAETLGGADLVELIAEHTHTCYLGDRTQRHDWGYGCGECPACRLRAQGWRR 233


>gi|118574282|sp|Q146Z6|QUEC_BURXL RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
          Length = 243

 Score =  203 bits (517), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 125/233 (53%), Positives = 178/233 (76%), Gaps = 2/233 (0%)

Query: 4   IIKKAPS--ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           +I+K     AL+LFSGGQDS+TCL+WAL+R++ VETL FDYGQR++VELECR   R  +V
Sbjct: 1   MIRKDAKRSALVLFSGGQDSATCLAWALERYETVETLGFDYGQRHRVELECREGFRNAVV 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
              P W D LGEDH++ L++LG IS +++T+ + ++   N LPNTFVPGRN++F+  AA 
Sbjct: 61  RAFPAWADRLGEDHMIDLSVLGAISDTAMTREIEIEATANGLPNTFVPGRNLMFMTIAAA 120

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           +AYR G+  +V G+CETD+SGYPDCR DT++A++ A+NLGM++   + TPLMWL K +TW
Sbjct: 121 IAYRRGLQVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRFLLETPLMWLDKADTW 180

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           +LA ++GG +LV L+  E+HTCYLG+R + + WG+GC  CPAC LR++G+  +
Sbjct: 181 RLAHELGGAELVELVRVETHTCYLGERAELHAWGFGCGECPACRLRKRGYEAY 233


>gi|254418985|ref|ZP_05032709.1| exsB protein [Brevundimonas sp. BAL3]
 gi|196185162|gb|EDX80138.1| exsB protein [Brevundimonas sp. BAL3]
          Length = 256

 Score =  203 bits (517), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 129/235 (54%), Positives = 177/235 (75%), Gaps = 1/235 (0%)

Query: 1   MNDIIKKAPS-ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           M+ I++K+P+ AL+LFSGGQDS+TCL+WAL+RF+RVET+ FDYGQR++VE+E R  VR  
Sbjct: 14  MSVILEKSPTSALVLFSGGQDSATCLAWALERFERVETVGFDYGQRHRVEMEARQAVRAG 73

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +   +P++ D LG+DH++ L   G I+ S+LT +  +++    LP TFVPGRN+IFLV A
Sbjct: 74  MGAALPQYADRLGDDHVVDLTGYGRIAESALTADRKIEMDARGLPTTFVPGRNLIFLVAA 133

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           A LA R G+  +V G+CETDYSGYPDCRH+T+ A+  A++LG++  V + TPLMWL K +
Sbjct: 134 AALADRRGLEVLVGGMCETDYSGYPDCRHETMEAMARALSLGLDKPVVIDTPLMWLTKGQ 193

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           TW LA+ IGG+ LV LI+E+SHTCY G R  R+ WGYGC  CPAC LR  G+ ++
Sbjct: 194 TWALAERIGGEALVELIIEDSHTCYQGDRTHRHAWGYGCGECPACELRAAGYEDW 248


>gi|16127390|ref|NP_421954.1| exsB protein [Caulobacter crescentus CB15]
 gi|221236198|ref|YP_002518635.1| queuosine biosynthesis protein QueC [Caulobacter crescentus NA1000]
 gi|81534466|sp|Q9A3P2|QUEC_CAUCR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764317|sp|B8H3X3|QUEC_CAUCN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|13424830|gb|AAK25122.1| exsB protein [Caulobacter crescentus CB15]
 gi|220965371|gb|ACL96727.1| queuosine biosynthesis protein QueC [Caulobacter crescentus NA1000]
          Length = 242

 Score =  203 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 122/232 (52%), Positives = 177/232 (76%), Gaps = 2/232 (0%)

Query: 5   IKKAPS--ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +       AL+LFSGGQDSS CL+WAL+R+DRVET+ FDYGQR+ +E++ R  VR+++  
Sbjct: 1   MSPRERQAALVLFSGGQDSSVCLAWALERYDRVETVGFDYGQRHAIEMQARQAVRREVAA 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
             P+W + LGEDH+L +   G ++ S+LT + A+++ +  LP+TFVPGRN++FL +AA L
Sbjct: 61  RFPQWAERLGEDHVLDIRSFGAVAQSALTADRAIEMTERGLPSTFVPGRNLVFLTYAAAL 120

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A R GI  +V G+CETD+SGYPDCR DT+ A++ A+NLGM+ +  + TPLMWL K +TW 
Sbjct: 121 ADRRGIDALVGGMCETDFSGYPDCRRDTLDAMQAALNLGMDRNFRIETPLMWLTKAQTWG 180

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           L++ +GG+ LV+LI+EESHTCY G+R + + WG+GC +CPAC LR+KG++E+
Sbjct: 181 LSKQLGGEALVSLIVEESHTCYQGERGQLHAWGHGCGTCPACELREKGYVEW 232


>gi|296161370|ref|ZP_06844177.1| exsB protein [Burkholderia sp. Ch1-1]
 gi|295888356|gb|EFG68167.1| exsB protein [Burkholderia sp. Ch1-1]
          Length = 243

 Score =  203 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 123/233 (52%), Positives = 177/233 (75%), Gaps = 2/233 (0%)

Query: 4   IIKKAPS--ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           +I+K     AL+LFSGGQDS+TCL+WAL+R++ VETL FDYGQR++VELECR   R  + 
Sbjct: 1   MIRKDAKRSALVLFSGGQDSATCLAWALERYETVETLGFDYGQRHRVELECREGFRNAVA 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
              P W + LGEDH++ L++LG IS +++T+ + ++   N LPNTFVPGRN++F+  AA 
Sbjct: 61  RAFPAWAERLGEDHMIDLSVLGAISDTAMTREIEIEATANGLPNTFVPGRNLMFMTIAAA 120

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           +AYR G+  +V G+CETD+SGYPDCR DT++A++ A+NLGM++   + TPLMWL K +TW
Sbjct: 121 IAYRRGLQVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRFLLETPLMWLDKADTW 180

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           +LA ++GG +LV L+  E+HTCYLG+R + + WG+GC  CPAC LR++G+  +
Sbjct: 181 RLAHELGGAELVELVRVETHTCYLGERAELHAWGFGCGECPACRLRKRGYEAY 233


>gi|83719597|ref|YP_440695.1| exsB protein [Burkholderia thailandensis E264]
 gi|167579366|ref|ZP_02372240.1| exsB protein [Burkholderia thailandensis TXDOH]
 gi|167617467|ref|ZP_02386098.1| exsB protein [Burkholderia thailandensis Bt4]
 gi|257140657|ref|ZP_05588919.1| exsB protein [Burkholderia thailandensis E264]
 gi|110816219|sp|Q2T2A4|QUEC_BURTA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|83653422|gb|ABC37485.1| exsB protein [Burkholderia thailandensis E264]
          Length = 244

 Score =  203 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 119/226 (52%), Positives = 173/226 (76%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS+TC++WAL+R+  VETL FDYGQR++VELECR  VR  +    P+W   
Sbjct: 10  ALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVRDALKRRFPQWSHK 69

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG+DH++ L++LG IS +++T+ + ++   N LPNTFVPGRN++F+   A +AYR G+  
Sbjct: 70  LGDDHMIDLSVLGAISDTAMTRAIEIETASNGLPNTFVPGRNLLFMTIGAAIAYRRGLRA 129

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G+CETD+SGYPDCR DT++A++ A+NLGM++   + TPLMWL K +TW+LA+ +GG+
Sbjct: 130 LVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRFVLETPLMWLDKADTWRLAEQLGGK 189

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            LV LI  E+HTCY+G+R + ++WG+GC  CPAC LR++G+  +  
Sbjct: 190 PLVELIRVETHTCYVGERSELHDWGFGCGECPACKLRKRGFEAYLR 235


>gi|167834986|ref|ZP_02461869.1| exsB protein [Burkholderia thailandensis MSMB43]
          Length = 244

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 119/226 (52%), Positives = 172/226 (76%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS+TC++WAL+R+  VETL FDYGQR++VELECR  VR  +    P+W   
Sbjct: 10  ALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVRDALKRRFPQWSHK 69

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG+DH++ L++LG IS +++T+ + ++   N LPNTFVPGRN++F+   A +AYR G+  
Sbjct: 70  LGDDHMVDLSVLGAISDTAMTRAIEIETASNGLPNTFVPGRNLLFMTIGAAIAYRRGLRV 129

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G+CETD+SGYPDCR DT++A++  +NLGM+S   + TPLMWL K +TW+LA+ +GG+
Sbjct: 130 LVGGMCETDFSGYPDCRDDTMKALQVTLNLGMDSRFVLETPLMWLDKADTWRLAEQLGGK 189

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            LV LI  E+HTCY+G+R + ++WG+GC  CPAC LR++G+  +  
Sbjct: 190 PLVELIRVETHTCYVGERSELHDWGFGCGECPACKLRKRGFEAYLR 235


>gi|295675133|ref|YP_003603657.1| exsB protein [Burkholderia sp. CCGE1002]
 gi|295434976|gb|ADG14146.1| exsB protein [Burkholderia sp. CCGE1002]
          Length = 270

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 124/227 (54%), Positives = 174/227 (76%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             SAL+LFSGGQDS+TCL+WALDR+D VET+ FDYGQR++VELECR   R+ +V   P W
Sbjct: 34  KRSALVLFSGGQDSATCLAWALDRYDTVETIGFDYGQRHRVELECREGFRQAVVRAFPAW 93

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D LG+DH + L++LG IS +++T+ + ++   N LPNTFVPGRN++F+  AA +AYR G
Sbjct: 94  ADRLGDDHTIDLSLLGAISDTAMTREIEIEATANGLPNTFVPGRNLMFMTIAAAIAYRRG 153

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +V G+CETD+SGYPDCR DT++A++ A+NLGM++   + TPLMWL K +TW+LA ++
Sbjct: 154 LQVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRFALETPLMWLDKADTWRLAHEL 213

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           GG  LV L+  E+HTCYLG+R + + WG+GC  CPAC LR++G+  +
Sbjct: 214 GGDALVELVRVETHTCYLGERAELHSWGFGCGECPACRLRKRGYEAY 260


>gi|149926202|ref|ZP_01914464.1| exsB protein [Limnobacter sp. MED105]
 gi|149825020|gb|EDM84232.1| exsB protein [Limnobacter sp. MED105]
          Length = 234

 Score =  202 bits (513), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 114/228 (50%), Positives = 168/228 (73%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               AL+LFSGGQDS+ CL+WAL +F+ VET+ FDYGQR+++ELECRL V  ++ E  P+
Sbjct: 1   MNKKALVLFSGGQDSTVCLAWALSKFEHVETIGFDYGQRHRIELECRLTVLDRVREQFPE 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           W   LGED ++ L+ LG IS  +LT+   +++ +N LPNTFVPGRN++F + ++ +AYR 
Sbjct: 61  WAYKLGEDRVIDLSWLGQISDCALTEEREIELNENGLPNTFVPGRNLVFFLISSAVAYRR 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G++ +V G+C+TD+SGYPDCR DT++A++ A NLGM S     TPLMW+ K ET++L + 
Sbjct: 121 GLSTLVGGMCQTDFSGYPDCREDTLKALQVATNLGMASTFRFETPLMWIDKMETFQLGEQ 180

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           +GG+ L+ +I+ ++HTCY G R   ++WG+GC  CPAC LR++GW  +
Sbjct: 181 LGGKKLLEIIVRDTHTCYTGDRSHEHDWGFGCGECPACDLRKRGWKNY 228


>gi|152981295|ref|YP_001354876.1| ExsB protein [Janthinobacterium sp. Marseille]
 gi|167016430|sp|A6T2X9|QUEC_JANMA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|151281372|gb|ABR89782.1| ExsB protein [Janthinobacterium sp. Marseille]
          Length = 235

 Score =  202 bits (512), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 122/228 (53%), Positives = 178/228 (78%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +  A  AL+LFSGGQDS+TC++WAL R+ +VET+ FDYGQR+ VELE R  V + + ++ 
Sbjct: 1   MSSADGALVLFSGGQDSTTCVAWALKRYAKVETIGFDYGQRHAVELEVRPDVLRSLRDIN 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
           P+W   LGEDH++ L+++  IS++++T++V + + +N LPNTFVPGRN++F+  AAT+AY
Sbjct: 61  PEWNKKLGEDHMIDLSLISKISNTAMTQDVEITMMENGLPNTFVPGRNLLFMTVAATVAY 120

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           R G+  +V G+CETD+SGYPDCR DT++A++ A+NLGM + + + TPLMW+ K ETWK+A
Sbjct: 121 RRGLDVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMATRLKLETPLMWIDKAETWKMA 180

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
           QD+GG+ LV+LI   +HTCYLG+R   ++WGYGC +CPAC LR +G+ 
Sbjct: 181 QDLGGKPLVDLIRAGTHTCYLGERGALHDWGYGCGTCPACELRARGYA 228


>gi|220926504|ref|YP_002501806.1| exsB protein [Methylobacterium nodulans ORS 2060]
 gi|219951111|gb|ACL61503.1| exsB protein [Methylobacterium nodulans ORS 2060]
          Length = 233

 Score =  202 bits (512), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 136/232 (58%), Positives = 181/232 (78%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           ++ +  AL+LFSGGQDS+TCL+WAL+RF RVETL FDYGQR++VEL+CR  +R  +  L 
Sbjct: 1   METSEGALVLFSGGQDSTTCLAWALERFGRVETLGFDYGQRHRVELDCRDRLRAGLAALD 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
           P W   LG DH LPL +LG+IS ++LT++ A+ + +  LPNTFVPGRN++FL FAA LAY
Sbjct: 61  PAWAARLGPDHTLPLGVLGEISETALTRDSAIALAETGLPNTFVPGRNLVFLTFAAALAY 120

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           R G+ +IV G+CETDYSGYPDCR DTI+A++ A+NLGME    +HTPLMW+ K  TW+LA
Sbjct: 121 RRGLRHIVGGMCETDYSGYPDCRDDTIKALQVALNLGMERRFVLHTPLMWIDKAATWRLA 180

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           + +GG+ LV+LI+E+SHTCY G+R +R+ WGYGC +CPAC LR  G+  F+ 
Sbjct: 181 EALGGEALVDLIVEDSHTCYRGERGERHAWGYGCGTCPACELRAAGYARFRA 232


>gi|209515826|ref|ZP_03264688.1| exsB protein [Burkholderia sp. H160]
 gi|209503674|gb|EEA03668.1| exsB protein [Burkholderia sp. H160]
          Length = 243

 Score =  202 bits (512), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 123/233 (52%), Positives = 176/233 (75%), Gaps = 2/233 (0%)

Query: 4   IIKKAPS--ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           +I+K     AL+LFSGGQDS+TCL+WALDR+D VET+ FDYGQR++VELECR   R+ +V
Sbjct: 1   MIRKDAKRSALVLFSGGQDSATCLAWALDRYDTVETIGFDYGQRHRVELECREGFRQAVV 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
              P W D LG+DH++ L++LG IS +++T+ + ++   N LPNTFVPGRN++F+  AA 
Sbjct: 61  RAFPAWADRLGDDHMIDLSLLGAISDTAMTREIEIEATANGLPNTFVPGRNLMFMTIAAA 120

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           +AYR G+  +V G+CETD+SGYPDCR DT++A++  +NLGM+    + TPLMWL K +TW
Sbjct: 121 IAYRRGLQVLVGGMCETDFSGYPDCRDDTMKALQVTLNLGMDKRFALETPLMWLDKADTW 180

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           +LA ++GG  LV L+  E+HTCY+G+R + + WG+GC  CPAC LR++G+  +
Sbjct: 181 RLAHELGGDALVELVRVETHTCYVGERAELHSWGFGCGECPACRLRKRGYEAY 233


>gi|302383450|ref|YP_003819273.1| exsB protein [Brevundimonas subvibrioides ATCC 15264]
 gi|302194078|gb|ADL01650.1| exsB protein [Brevundimonas subvibrioides ATCC 15264]
          Length = 238

 Score =  201 bits (511), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 126/231 (54%), Positives = 166/231 (71%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M +      SAL+LFSGGQDS+TCL+WAL+RFDRVET+ FDYGQR+ VE++ RL VR  +
Sbjct: 1   MTETQPAPSSALVLFSGGQDSATCLAWALERFDRVETVGFDYGQRHAVEMDARLRVRAGM 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             ++P+  D LG DH++ L   G I  +++T + A+++    LP TFVPGRN+IFL  AA
Sbjct: 61  PRVLPRLADRLGPDHVVDLTGFGAIGETAMTTDRAIEVGARGLPTTFVPGRNLIFLTAAA 120

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            LA R G+  +V G+CETD+SGYPDCR +T+ A+E A++LG++  V + TPLMWL K  T
Sbjct: 121 ALADRRGLEVLVGGMCETDFSGYPDCRRETMDAMERALSLGLDRPVPIQTPLMWLTKART 180

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
           W LA  IGG  LV+LI+E+SHTCY G R  R+ WGYGC +CPAC LR  GW
Sbjct: 181 WALADAIGGAALVDLIVEDSHTCYRGDRTHRHAWGYGCGACPACELRAAGW 231


>gi|167561071|ref|ZP_02353987.1| exsB protein [Burkholderia oklahomensis EO147]
 gi|167568300|ref|ZP_02361174.1| exsB protein [Burkholderia oklahomensis C6786]
          Length = 244

 Score =  201 bits (511), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 118/226 (52%), Positives = 176/226 (77%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS+TC++WAL+R+  VETL FDYGQR++VELECR  VR  + +  P+W++ 
Sbjct: 10  ALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECRDGVRDALKQRFPQWENK 69

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG+DH++ L++LG IS +++T+ + ++   N LPNTFVPGRN++F+   A +AYR G+  
Sbjct: 70  LGDDHMIDLSVLGAISDTAMTRAIEIETASNGLPNTFVPGRNLLFMTIGAAIAYRRGLRV 129

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G+CETD+SGYPDCR DT++A++  +NLGM++   + TPLMWL K +TW+LA+ +GG+
Sbjct: 130 LVGGMCETDFSGYPDCRDDTMKALQVTLNLGMDTRFVLETPLMWLDKADTWRLAEQLGGK 189

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            LV LI  E+HTCY+G+R + ++WG+GC  CPAC LR++G+  ++ 
Sbjct: 190 PLVELIRVETHTCYVGERSELHDWGFGCGECPACKLRKRGYEAYQR 235


>gi|187922324|ref|YP_001893966.1| exsB protein [Burkholderia phytofirmans PsJN]
 gi|254764316|sp|B2T1L3|QUEC_BURPP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|187713518|gb|ACD14742.1| exsB protein [Burkholderia phytofirmans PsJN]
          Length = 244

 Score =  201 bits (511), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 122/233 (52%), Positives = 177/233 (75%), Gaps = 2/233 (0%)

Query: 4   IIKKAPS--ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           +I+K     AL+LFSGGQDS+TCL+WAL+R++ VETL FDYGQR++VELECR   R  + 
Sbjct: 1   MIRKDAKRSALVLFSGGQDSATCLAWALERYETVETLGFDYGQRHRVELECREGFRNAVA 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
              P W + LG+DH++ L++LG IS +++T+ + ++   N LPNTFVPGRN++F+  AA 
Sbjct: 61  RAFPAWAERLGDDHMIDLSVLGAISDTAMTREIEIEATANGLPNTFVPGRNLMFMTIAAA 120

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           +AYR G+  +V G+CETD+SGYPDCR DT++A++ A+NLGM++ V + TPLMWL K +TW
Sbjct: 121 IAYRRGLQVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRVLLETPLMWLDKGDTW 180

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           +LA  +GG +LV L+  E+HTCY+G+R + + WG+GC  CPAC LR++G+  +
Sbjct: 181 RLAHQLGGDELVELVRVETHTCYVGERAELHAWGFGCGECPACRLRKRGYEAY 233


>gi|239814070|ref|YP_002942980.1| exsB protein [Variovorax paradoxus S110]
 gi|239800647|gb|ACS17714.1| exsB protein [Variovorax paradoxus S110]
          Length = 237

 Score =  201 bits (510), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 128/233 (54%), Positives = 171/233 (73%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +    +AL+LFSGGQDS+TCL+ AL ++ RVETL FDYGQR++VEL+ R  +  ++ E  
Sbjct: 1   MPLHTTALVLFSGGQDSTTCLAEALSKYQRVETLGFDYGQRHRVELDVRGTILARMRERF 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
           P W   LGEDH+L LA L  +  SSLT+ VA ++Q + LPNTFVPGRN++FL  A  LAY
Sbjct: 61  PDWAPRLGEDHVLTLAALAQLGGSSLTEEVAFEMQADGLPNTFVPGRNLLFLTLAGALAY 120

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           R G+  IV GVCETD+SGYPDCR DT++A++ A++LG+E  + + TPLMW+ K ETW++A
Sbjct: 121 RRGLQVIVTGVCETDFSGYPDCRDDTVKAMQLALSLGLERRLVIETPLMWIDKAETWQMA 180

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
             +GG+ LV LI+EE+HTCYLG R+ R  WGYGC  CPAC LR+ GW  +  +
Sbjct: 181 HRLGGEPLVELIVEETHTCYLGDREHRQAWGYGCGECPACELRKNGWERYASR 233


>gi|300313463|ref|YP_003777555.1| PP-loop superfamily ATPase [Herbaspirillum seropedicae SmR1]
 gi|300076248|gb|ADJ65647.1| PP-loop superfamily ATPase protein [Herbaspirillum seropedicae
           SmR1]
          Length = 263

 Score =  201 bits (510), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 123/231 (53%), Positives = 175/231 (75%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              SAL+LFSGGQDS+TCL+WAL R+ RVET+ FDYGQR+ +EL  R  + +++    P 
Sbjct: 29  NTQSALVLFSGGQDSTTCLAWALSRYQRVETIGFDYGQRHAIELAVRPALLERMRAFSPD 88

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           W+  LGEDH++ L+++G IS ++LT++V + +QDN LPNTFVPGRN++F+  AATLAYR 
Sbjct: 89  WQTRLGEDHMIDLSLIGKISDTALTRDVEIAMQDNGLPNTFVPGRNLLFMTVAATLAYRR 148

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G+  +V G+CETD+SGYPDCR DT++A++ A+NLGM + + V TPLMW+ K  TW LA+ 
Sbjct: 149 GLNVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMATQLKVETPLMWIDKAGTWALAEL 208

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +GG  LV+LI  ++HTCYLG+R   ++WG+GC  CPAC LR +G+ ++  +
Sbjct: 209 LGGAPLVDLIRTDTHTCYLGERGALHDWGHGCGKCPACELRARGYQQYAAR 259


>gi|323524431|ref|YP_004226584.1| exsB protein [Burkholderia sp. CCGE1001]
 gi|323381433|gb|ADX53524.1| exsB protein [Burkholderia sp. CCGE1001]
          Length = 243

 Score =  201 bits (510), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 122/233 (52%), Positives = 177/233 (75%), Gaps = 2/233 (0%)

Query: 4   IIKKAPS--ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           +I+K     AL+LFSGGQDS+TCL+WAL+R++ VETL FDYGQR++VELECR   R  + 
Sbjct: 1   MIRKDAKRSALVLFSGGQDSATCLAWALERYETVETLGFDYGQRHRVELECREGFRNAVA 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
              P W + LG+DH++ L++LG IS +++T+ + ++   N LPNTFVPGRN++F+  AA 
Sbjct: 61  RTFPAWGERLGDDHMVDLSVLGAISETAMTREIEIEATANGLPNTFVPGRNLMFMTIAAA 120

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           +AYR G+  +V G+CETD+SGYPDCR DT++A++ A+NLGM+S   + TPLMWL K +TW
Sbjct: 121 IAYRRGLQVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDSRFVLETPLMWLDKADTW 180

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           +LA ++GG +LV L+  E+HTCY+G+R + + WG+GC  CPAC LR++G+  +
Sbjct: 181 RLAHELGGDELVELVRVETHTCYVGERAELHAWGFGCGECPACRLRKRGYEAW 233


>gi|170744632|ref|YP_001773287.1| exsB protein [Methylobacterium sp. 4-46]
 gi|168198906|gb|ACA20853.1| exsB protein [Methylobacterium sp. 4-46]
          Length = 233

 Score =  200 bits (509), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 139/232 (59%), Positives = 184/232 (79%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +     AL+LFSGGQDS+TCL+WALDRF RVETL FDYGQR++VEL+CR  +R  +  L 
Sbjct: 1   MTVDEGALVLFSGGQDSTTCLAWALDRFARVETLGFDYGQRHRVELDCRDRLRAGLAALK 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
           P+W   LGEDH LPL +LGDIS ++LT++ A+ + ++ LPNTFVPGRN++FL FAA LAY
Sbjct: 61  PEWARRLGEDHTLPLGVLGDISETALTRDGAIALAESGLPNTFVPGRNLVFLTFAAALAY 120

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           R G+ +++ G+CETDYSGYPDCR DTI+A++ A+NLGME    +HTPLMW+ K ETW+LA
Sbjct: 121 RRGLRHLIGGMCETDYSGYPDCRDDTIKALQVALNLGMERRFVLHTPLMWIDKAETWRLA 180

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           +D+GG+ LV+LI+E+SHTCYLG+R  R+ WG GC +CPAC LR+ G+  F+ 
Sbjct: 181 RDLGGEALVDLIVEDSHTCYLGERGARHAWGRGCGTCPACRLREAGYARFRA 232


>gi|315499627|ref|YP_004088430.1| exsb protein [Asticcacaulis excentricus CB 48]
 gi|315417639|gb|ADU14279.1| exsB protein [Asticcacaulis excentricus CB 48]
          Length = 241

 Score =  200 bits (508), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 115/235 (48%), Positives = 171/235 (72%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +    SAL+LFSGGQDS+ CL+WAL  F+RVET+ FDYGQR+ +E+  R  V ++  E
Sbjct: 7   ETVPAECSALVLFSGGQDSTACLAWALTHFERVETIGFDYGQRHAIEMTTRARVLERFPE 66

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +    +  LG+DH++ L   G ++ SSLT+   +++ +  LPN+FVPGRN++F V+AA +
Sbjct: 67  VFELARTRLGDDHVVDLKGFGRVAESSLTREQEIRMGERGLPNSFVPGRNLVFFVYAAAV 126

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A R GI ++V G+CETD+SGYPDCR DT+ A++T +NLG+E    +  PLM+L K ETW 
Sbjct: 127 ADRRGIDHLVGGMCETDFSGYPDCRKDTLEAMQTVLNLGIERPYRIDAPLMFLTKAETWA 186

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           L   +GG  LV+L+LE++HTCY+G+R +R+EWGYGC +CPAC LR +G+ +++ +
Sbjct: 187 LTHQLGGDALVDLVLEDTHTCYMGERGQRHEWGYGCGTCPACELRARGFEQWRNR 241


>gi|39935877|ref|NP_948153.1| ExsB family transcriptional regulator [Rhodopseudomonas palustris
           CGA009]
 gi|81562458|sp|Q6N608|QUEC_RHOPA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|39649731|emb|CAE28252.1| possible exsB protein [Rhodopseudomonas palustris CGA009]
          Length = 237

 Score =  200 bits (508), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 137/229 (59%), Positives = 177/229 (77%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               +AL+LFSGGQDS+TCL+WAL RF RVET+ FDYGQR+ +ELECR  +      +  
Sbjct: 5   SSDKTALVLFSGGQDSATCLAWALARFARVETIGFDYGQRHLIELECRARLLDGFRAISD 64

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            W   LG++H L +  L +IS ++LT++VA+ +  + LPNTFVPGRN+IFL FAA LAYR
Sbjct: 65  DWAAKLGDNHTLTIPTLAEISDTALTRDVAIAMGADGLPNTFVPGRNLIFLNFAAALAYR 124

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            GIT+IV G+CETDYSGYPDCR+DTI+A++TA++LGM   +T+HTPLMW  K  TW+LAQ
Sbjct: 125 RGITDIVGGMCETDYSGYPDCRNDTIQALQTALSLGMARDITLHTPLMWRDKAATWQLAQ 184

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           D+GG  LV+LI E+SHTCYLG+R  R++WGYGC  CPAC LR KGW+E+
Sbjct: 185 DLGGDALVDLIREDSHTCYLGERGARHDWGYGCGECPACRLRAKGWIEY 233


>gi|53717819|ref|YP_106805.1| hypothetical protein BPSL0177 [Burkholderia pseudomallei K96243]
 gi|53724958|ref|YP_101991.1| exsB protein [Burkholderia mallei ATCC 23344]
 gi|76810042|ref|YP_331770.1| exsB protein [Burkholderia pseudomallei 1710b]
 gi|121599254|ref|YP_994091.1| exsB protein [Burkholderia mallei SAVP1]
 gi|124386328|ref|YP_001028246.1| exsB protein [Burkholderia mallei NCTC 10229]
 gi|126440314|ref|YP_001057214.1| ExsB protein [Burkholderia pseudomallei 668]
 gi|126449865|ref|YP_001081889.1| exsB protein [Burkholderia mallei NCTC 10247]
 gi|126455276|ref|YP_001064454.1| exsB protein [Burkholderia pseudomallei 1106a]
 gi|134284079|ref|ZP_01770773.1| exsB protein [Burkholderia pseudomallei 305]
 gi|167003283|ref|ZP_02269072.1| exsB protein [Burkholderia mallei PRL-20]
 gi|217425012|ref|ZP_03456508.1| protein ExsB [Burkholderia pseudomallei 576]
 gi|226194594|ref|ZP_03790189.1| exsB protein [Burkholderia pseudomallei Pakistan 9]
 gi|237810349|ref|YP_002894800.1| ExsB protein [Burkholderia pseudomallei MSHR346]
 gi|238561921|ref|ZP_00441217.2| ExsB protein [Burkholderia mallei GB8 horse 4]
 gi|242316798|ref|ZP_04815814.1| exsB protein [Burkholderia pseudomallei 1106b]
 gi|254177086|ref|ZP_04883743.1| exsB protein [Burkholderia mallei ATCC 10399]
 gi|254182244|ref|ZP_04888841.1| exsB protein [Burkholderia pseudomallei 1655]
 gi|254188168|ref|ZP_04894680.1| exsB protein [Burkholderia pseudomallei Pasteur 52237]
 gi|254196853|ref|ZP_04903277.1| exsB protein [Burkholderia pseudomallei S13]
 gi|254203671|ref|ZP_04910031.1| exsB protein [Burkholderia mallei FMH]
 gi|254208647|ref|ZP_04914995.1| exsB protein [Burkholderia mallei JHU]
 gi|254258405|ref|ZP_04949459.1| exsB protein [Burkholderia pseudomallei 1710a]
 gi|254360299|ref|ZP_04976569.1| exsB protein [Burkholderia mallei 2002721280]
 gi|81380692|sp|Q63YL0|QUEC_BURPS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|81605690|sp|Q62MS6|QUEC_BURMA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|110816217|sp|Q3JXD3|QUEC_BURP1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|167016413|sp|A3MNQ3|QUEC_BURM7 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|167016414|sp|A2S8H7|QUEC_BURM9 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|167016415|sp|A1V788|QUEC_BURMS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|167016416|sp|A3NQ33|QUEC_BURP0 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|167016417|sp|A3N4E3|QUEC_BURP6 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|52208233|emb|CAH34164.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
 gi|52428381|gb|AAU48974.1| exsB protein [Burkholderia mallei ATCC 23344]
 gi|76579495|gb|ABA48970.1| exsB protein [Burkholderia pseudomallei 1710b]
 gi|121228064|gb|ABM50582.1| exsB protein [Burkholderia mallei SAVP1]
 gi|124294348|gb|ABN03617.1| protein ExsB [Burkholderia mallei NCTC 10229]
 gi|126219807|gb|ABN83313.1| protein ExsB [Burkholderia pseudomallei 668]
 gi|126228918|gb|ABN92458.1| exsB protein [Burkholderia pseudomallei 1106a]
 gi|126242735|gb|ABO05828.1| protein ExsB [Burkholderia mallei NCTC 10247]
 gi|134244531|gb|EBA44635.1| exsB protein [Burkholderia pseudomallei 305]
 gi|147745183|gb|EDK52263.1| exsB protein [Burkholderia mallei FMH]
 gi|147750523|gb|EDK57592.1| exsB protein [Burkholderia mallei JHU]
 gi|148029539|gb|EDK87444.1| exsB protein [Burkholderia mallei 2002721280]
 gi|157935848|gb|EDO91518.1| exsB protein [Burkholderia pseudomallei Pasteur 52237]
 gi|160698127|gb|EDP88097.1| exsB protein [Burkholderia mallei ATCC 10399]
 gi|169653596|gb|EDS86289.1| exsB protein [Burkholderia pseudomallei S13]
 gi|184212782|gb|EDU09825.1| exsB protein [Burkholderia pseudomallei 1655]
 gi|217392032|gb|EEC32058.1| protein ExsB [Burkholderia pseudomallei 576]
 gi|225933295|gb|EEH29287.1| exsB protein [Burkholderia pseudomallei Pakistan 9]
 gi|237506493|gb|ACQ98811.1| ExsB protein [Burkholderia pseudomallei MSHR346]
 gi|238523619|gb|EEP87056.1| ExsB protein [Burkholderia mallei GB8 horse 4]
 gi|242140037|gb|EES26439.1| exsB protein [Burkholderia pseudomallei 1106b]
 gi|243061140|gb|EES43326.1| exsB protein [Burkholderia mallei PRL-20]
 gi|254217094|gb|EET06478.1| exsB protein [Burkholderia pseudomallei 1710a]
          Length = 244

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 120/226 (53%), Positives = 173/226 (76%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS+TC++WAL+R+  VETL FDYGQR++VELECR  VR  +    P+W   
Sbjct: 10  ALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVRDALKRRFPQWSHK 69

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG+DH++ L++LG IS +++T+ + ++   N LPNTFVPGRN++F+  AA +AYR G+  
Sbjct: 70  LGDDHLIDLSVLGSISDTAMTRAIEIETASNGLPNTFVPGRNLLFMTIAAAIAYRRGLRA 129

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G+CETD+SGYPDCR DT++A++ A+NLGM++   + TPLMWL K +TW+LA+ +GG 
Sbjct: 130 LVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRFVLETPLMWLDKADTWRLAEQLGGA 189

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            LV LI  E+HTCY+G+R + ++WG+GC  CPAC LR++G+  +  
Sbjct: 190 PLVELIRVETHTCYVGERSELHDWGFGCGECPACKLRKRGYDAYLR 235


>gi|307728150|ref|YP_003905374.1| exsB protein [Burkholderia sp. CCGE1003]
 gi|307582685|gb|ADN56083.1| exsB protein [Burkholderia sp. CCGE1003]
          Length = 243

 Score =  200 bits (507), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 122/233 (52%), Positives = 177/233 (75%), Gaps = 2/233 (0%)

Query: 4   IIKKAPS--ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           +I+K     AL+LFSGGQDS+TCL+WAL+R++ VETL FDYGQR++VELECR   R  + 
Sbjct: 1   MIRKDAKRSALVLFSGGQDSATCLAWALERYETVETLGFDYGQRHRVELECREGFRSAVA 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
              P W + LG+DH++ L++LG IS +++T+ + ++   N LPNTFVPGRN++F+  AA 
Sbjct: 61  RTFPAWGERLGDDHMIDLSVLGAISDTAMTREIEIEATANGLPNTFVPGRNLMFMTIAAA 120

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           +AYR G+  +V G+CETD+SGYPDCR DT++A++ A+NLGM+S   + TPLMWL K +TW
Sbjct: 121 IAYRRGLQVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDSRFLLETPLMWLDKADTW 180

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           +LA ++GG +LV L+  E+HTCY+G+R + + WG+GC  CPAC LR++G+  +
Sbjct: 181 RLAHELGGDELVELVRVETHTCYVGERAELHAWGFGCGECPACRLRKRGYEAY 233


>gi|161526285|ref|YP_001581297.1| exsB protein [Burkholderia multivorans ATCC 17616]
 gi|189349001|ref|YP_001944629.1| ExsB protein [Burkholderia multivorans ATCC 17616]
 gi|221214676|ref|ZP_03587646.1| exsB protein [Burkholderia multivorans CGD1]
 gi|254764314|sp|A9AC62|QUEC_BURM1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|160343714|gb|ABX16800.1| exsB protein [Burkholderia multivorans ATCC 17616]
 gi|189333023|dbj|BAG42093.1| ExsB protein [Burkholderia multivorans ATCC 17616]
 gi|221165566|gb|EED98042.1| exsB protein [Burkholderia multivorans CGD1]
          Length = 244

 Score =  200 bits (507), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 122/224 (54%), Positives = 176/224 (78%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS+TC++WAL+R+  VETL FDYGQR++VELECR  VR+ +    P W D 
Sbjct: 10  ALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVREALKRQFPAWADR 69

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG+DH++ L++LG IS +++T+ + ++   N LPNTFVPGRN++F+  AA +AYR G+  
Sbjct: 70  LGDDHMIDLSVLGAISDTAMTRAIEIETAANGLPNTFVPGRNLLFMTIAAAIAYRRGLRV 129

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G+CETD+SGYPDCR DT++A++ A+NLGM++ + + TPLMWL K +TW+LA+ +GGQ
Sbjct: 130 LVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRIVLETPLMWLDKAQTWQLAEQLGGQ 189

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            LV LI  E+HTCY+G+R + ++WG+GC  CPAC LR++G+  +
Sbjct: 190 ALVELIRVETHTCYVGERAELHDWGFGCGECPACKLRKRGYEAY 233


>gi|325518104|gb|EGC97894.1| ExsB family protein [Burkholderia sp. TJI49]
          Length = 244

 Score =  200 bits (507), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 121/224 (54%), Positives = 177/224 (79%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS+TC++WAL+R+  VETL FDYGQR++VELECR  VR+ +    P+W D 
Sbjct: 10  ALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVREALKRQFPQWSDR 69

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG+DH++ L++LG IS +++T+ + ++   N LPNTFVPGRN++F+  AA +AYR G+  
Sbjct: 70  LGDDHMIDLSVLGAISDTAMTRTIEIETAANGLPNTFVPGRNLLFMTIAAAIAYRRGLRV 129

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G+CETD+SGYPDCR DT++A++ A+NLGM++ + + TPLMWL K +TW+LA+ +GG+
Sbjct: 130 LVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRIVLETPLMWLDKAQTWQLAEQLGGE 189

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            LV LI  E+HTCY+G+R + ++WG+GC  CPAC LR++G+  +
Sbjct: 190 ALVELIRVETHTCYVGERAELHDWGFGCGECPACKLRKRGYEAY 233


>gi|110816215|sp|Q89LP8|QUEC_BRAJA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
          Length = 237

 Score =  199 bits (506), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 139/234 (59%), Positives = 176/234 (75%), Gaps = 1/234 (0%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D    + +AL+LFSGGQDS+TCL+WAL RF RVETL FDYGQR+ VEL CR  +   +
Sbjct: 1   MSDAFS-SETALVLFSGGQDSTTCLAWALSRFARVETLGFDYGQRHAVELACRDRLFDGL 59

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             L   W D LGE H L +  L  IS ++LT++VA+ +  + LPNTFVPGRN++FL FAA
Sbjct: 60  KGLRADWADKLGESHTLSIPTLAAISDTALTRDVAIAMGADGLPNTFVPGRNLVFLTFAA 119

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            LAYR GIT+IV G+CETDYSGYPDCR +T+RA++ A++LGM     +HTPLMW+ K  T
Sbjct: 120 ALAYRRGITHIVGGMCETDYSGYPDCRDETVRAMQAALSLGMARKFELHTPLMWIDKAAT 179

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           WKLA D+GG+ LV+LI E+SHTCYLG+R  ++EWGYGC  CPAC LR KGW E+
Sbjct: 180 WKLAHDLGGEGLVDLIREQSHTCYLGERGAQHEWGYGCGECPACSLRAKGWNEY 233


>gi|170694007|ref|ZP_02885163.1| exsB protein [Burkholderia graminis C4D1M]
 gi|170141079|gb|EDT09251.1| exsB protein [Burkholderia graminis C4D1M]
          Length = 243

 Score =  199 bits (506), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 122/233 (52%), Positives = 177/233 (75%), Gaps = 2/233 (0%)

Query: 4   IIKKAPS--ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           +I+K     AL+LFSGGQDS+TCL+WAL+R+D VETL FDYGQR++VELECR   R  + 
Sbjct: 1   MIRKDAKRSALVLFSGGQDSATCLAWALERYDTVETLGFDYGQRHRVELECREGFRNAVA 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
              P W + LG+DH++ L++LG IS +++T+ + ++   + LPNTFVPGRN++F+  AA 
Sbjct: 61  RTFPAWGERLGDDHMIDLSVLGAISETAMTREIEIEATASGLPNTFVPGRNLMFMTIAAA 120

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           +AYR G+  +V G+CETD+SGYPDCR DT++A++ A+NLGM+S   + TPLMWL K +TW
Sbjct: 121 IAYRRGLEVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDSRFALETPLMWLDKADTW 180

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           +LA ++GG +LV L+  E+HTCY+G+R + + WG+GC  CPAC LR++G+  +
Sbjct: 181 RLAHELGGDELVELVRVETHTCYVGERAELHAWGFGCGECPACRLRKRGYEAY 233


>gi|27379606|ref|NP_771135.1| hypothetical protein blr4495 [Bradyrhizobium japonicum USDA 110]
 gi|27352758|dbj|BAC49760.1| blr4495 [Bradyrhizobium japonicum USDA 110]
          Length = 243

 Score =  199 bits (506), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 139/234 (59%), Positives = 176/234 (75%), Gaps = 1/234 (0%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D    + +AL+LFSGGQDS+TCL+WAL RF RVETL FDYGQR+ VEL CR  +   +
Sbjct: 7   MSDAFS-SETALVLFSGGQDSTTCLAWALSRFARVETLGFDYGQRHAVELACRDRLFDGL 65

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             L   W D LGE H L +  L  IS ++LT++VA+ +  + LPNTFVPGRN++FL FAA
Sbjct: 66  KGLRADWADKLGESHTLSIPTLAAISDTALTRDVAIAMGADGLPNTFVPGRNLVFLTFAA 125

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            LAYR GIT+IV G+CETDYSGYPDCR +T+RA++ A++LGM     +HTPLMW+ K  T
Sbjct: 126 ALAYRRGITHIVGGMCETDYSGYPDCRDETVRAMQAALSLGMARKFELHTPLMWIDKAAT 185

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           WKLA D+GG+ LV+LI E+SHTCYLG+R  ++EWGYGC  CPAC LR KGW E+
Sbjct: 186 WKLAHDLGGEGLVDLIREQSHTCYLGERGAQHEWGYGCGECPACSLRAKGWNEY 239


>gi|319791822|ref|YP_004153462.1| exsb protein [Variovorax paradoxus EPS]
 gi|315594285|gb|ADU35351.1| exsB protein [Variovorax paradoxus EPS]
          Length = 237

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 129/230 (56%), Positives = 169/230 (73%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +    +AL+LFSGGQDS+TCL+ AL ++ RVETL FDYGQR++VEL+ R  +  ++ E  
Sbjct: 1   MPLHTTALVLFSGGQDSTTCLADALSKYQRVETLGFDYGQRHRVELDVRGTILAQMRERF 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
           P W   LGEDH+L LA L  +  SSLT+ VA  +Q + LPNTFVPGRN++FL  A  LAY
Sbjct: 61  PDWAPRLGEDHVLTLAALAQLGGSSLTEEVAFAMQADGLPNTFVPGRNLLFLTLAGALAY 120

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           R G+  IV GVCETD+SGYPDCR DT++A++ A++LG+E  + + TPLMW+ K ETW++A
Sbjct: 121 RRGLQVIVTGVCETDFSGYPDCRDDTMKAMQLALSLGLERRLVIETPLMWIDKAETWQMA 180

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
             +GG+ LV LI+EE+HTCYLG R  R  WGYGC  CPAC LR+KGW  +
Sbjct: 181 HRLGGEPLVELIVEETHTCYLGDRVHRQAWGYGCGECPACDLRKKGWERY 230


>gi|221201866|ref|ZP_03574903.1| exsB protein [Burkholderia multivorans CGD2M]
 gi|221207628|ref|ZP_03580636.1| exsB protein [Burkholderia multivorans CGD2]
 gi|221172474|gb|EEE04913.1| exsB protein [Burkholderia multivorans CGD2]
 gi|221178286|gb|EEE10696.1| exsB protein [Burkholderia multivorans CGD2M]
          Length = 244

 Score =  199 bits (505), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 122/224 (54%), Positives = 176/224 (78%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS+TC++WAL+R+  VETL FDYGQR++VELECR  VR+ +    P W D 
Sbjct: 10  ALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVREALKRQFPAWVDR 69

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG+DH++ L++LG IS +++T+ + ++   N LPNTFVPGRN++F+  AA +AYR G+  
Sbjct: 70  LGDDHMIDLSVLGAISDTAMTRAIEIETAANGLPNTFVPGRNLLFMTIAAAIAYRRGLRV 129

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G+CETD+SGYPDCR DT++A++ A+NLGM++ + + TPLMWL K +TW+LA+ +GGQ
Sbjct: 130 LVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRIVLETPLMWLDKAQTWQLAEQLGGQ 189

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            LV LI  E+HTCY+G+R + ++WG+GC  CPAC LR++G+  +
Sbjct: 190 ALVELIRVETHTCYVGERAELHDWGFGCGECPACKLRKRGYEAY 233


>gi|186474814|ref|YP_001856284.1| exsB protein [Burkholderia phymatum STM815]
 gi|254764315|sp|B2JJV1|QUEC_BURP8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|184191273|gb|ACC69238.1| exsB protein [Burkholderia phymatum STM815]
          Length = 243

 Score =  199 bits (505), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 123/227 (54%), Positives = 174/227 (76%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             SAL+LFSGGQDS+TCL+WALDR++ VETL FDYGQR++VELECR   R  +    P+W
Sbjct: 7   KSSALVLFSGGQDSATCLAWALDRYETVETLGFDYGQRHRVELECREGFRSAVARTFPEW 66

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            + LG+DH++ L++LG IS +++T+ + +    N LPNTFVPGRN++F+  AA +AYR G
Sbjct: 67  GERLGDDHMIDLSVLGSISETAMTREIEIHAASNGLPNTFVPGRNLMFMTIAAAIAYRRG 126

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +V G+CETD+SGYPDCR DT++A++ A+NLGM+S   + TPLMW+ K +TW+LA ++
Sbjct: 127 LRVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDSRFVLETPLMWIDKADTWRLAHEL 186

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           GG +LV LI  E+HTCYLG+R + + WG+GC  CPAC LR++G+  +
Sbjct: 187 GGDELVELIRVETHTCYLGERAELHAWGFGCGECPACRLRKRGYEAY 233


>gi|238028937|ref|YP_002913168.1| exsB protein [Burkholderia glumae BGR1]
 gi|237878131|gb|ACR30464.1| ExsB protein [Burkholderia glumae BGR1]
          Length = 244

 Score =  199 bits (505), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 120/225 (53%), Positives = 178/225 (79%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS+TC++WAL+R+  VETL FDYGQR++VELECR  VR+ +    P+W   
Sbjct: 10  ALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVREALRTRFPQWAGR 69

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG+DH++ L++LG IS +++T+++ ++   N LPNTFVPGRN++F+  AA +AYR G+  
Sbjct: 70  LGDDHMIDLSVLGAISDTAMTRSIEIETAANGLPNTFVPGRNLLFMTIAAAVAYRRGLKV 129

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G+CETD+SGYPDCR DT++A++ A+NLGM++ V + TPLMWL K +TW+LA+ +GG 
Sbjct: 130 LVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRVVLETPLMWLDKADTWRLAEQLGGA 189

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            LV L+  E+HTCY+G+R + ++WG+GC +CPAC LR++G+  ++
Sbjct: 190 ALVELVRVETHTCYVGERAELHDWGFGCGACPACKLRRRGYEAYR 234


>gi|258542251|ref|YP_003187684.1| queuosine biosynthesis protein QueC/ExsB [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256633329|dbj|BAH99304.1| queuosine biosynthesis protein QueC/ExsB [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256636388|dbj|BAI02357.1| queuosine biosynthesis protein QueC/ExsB [Acetobacter pasteurianus
           IFO 3283-03]
 gi|256639441|dbj|BAI05403.1| queuosine biosynthesis protein QueC/ExsB [Acetobacter pasteurianus
           IFO 3283-07]
 gi|256642497|dbj|BAI08452.1| queuosine biosynthesis protein QueC/ExsB [Acetobacter pasteurianus
           IFO 3283-22]
 gi|256645552|dbj|BAI11500.1| queuosine biosynthesis protein QueC/ExsB [Acetobacter pasteurianus
           IFO 3283-26]
 gi|256648605|dbj|BAI14546.1| queuosine biosynthesis protein QueC/ExsB [Acetobacter pasteurianus
           IFO 3283-32]
 gi|256651658|dbj|BAI17592.1| queuosine biosynthesis protein QueC/ExsB [Acetobacter pasteurianus
           IFO 3283-01-42C]
 gi|256654649|dbj|BAI20576.1| queuosine biosynthesis protein QueC/ExsB [Acetobacter pasteurianus
           IFO 3283-12]
          Length = 246

 Score =  199 bits (505), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 144/228 (63%), Positives = 181/228 (79%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL+LFSGGQDS+TCL+WAL+R+ RVETL FDYGQR+ VELECR  +R+ +V   P 
Sbjct: 8   KQESALVLFSGGQDSATCLAWALERYGRVETLGFDYGQRHAVELECRASIRQGLVHQNPV 67

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           W + LGEDH LPL  LG++S +SLT++  + + +N LPNTFVPGRN+IFL FAA LA R 
Sbjct: 68  WAERLGEDHTLPLHALGEVSETSLTRDAEISMAENGLPNTFVPGRNLIFLTFAAALAARR 127

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI +IV GVCETDYSGYPDCR DTI+A++ A+NLGMES   +HTPLMWL K ETW+LA++
Sbjct: 128 GIKHIVTGVCETDYSGYPDCRDDTIKALQVALNLGMESRYVLHTPLMWLDKAETWELAEE 187

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           +GGQ LV LI +ESHTCYLG+R   + WG+GC +CPAC LR+ GW ++
Sbjct: 188 LGGQPLVELINKESHTCYLGERGTLHAWGHGCGTCPACQLRKSGWDDY 235


>gi|192291524|ref|YP_001992129.1| exsB protein [Rhodopseudomonas palustris TIE-1]
 gi|254764373|sp|B3QKK5|QUEC_RHOPT RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|192285273|gb|ACF01654.1| exsB protein [Rhodopseudomonas palustris TIE-1]
          Length = 237

 Score =  199 bits (505), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 137/229 (59%), Positives = 177/229 (77%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               +AL+LFSGGQDS+TCL+WAL RF RVET+ FDYGQR+ +ELECR  +      +  
Sbjct: 5   SSDKTALVLFSGGQDSATCLAWALARFARVETIGFDYGQRHLIELECRARLLDGFRAISD 64

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            W   LG++H L +  L +IS ++LT++VA+ +  + LPNTFVPGRN+IFL FAA LAYR
Sbjct: 65  DWAAKLGDNHTLTIPTLAEISDTALTRDVAIAMGADGLPNTFVPGRNLIFLNFAAALAYR 124

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            GIT+IV G+CETDYSGYPDCR+DTI+A++TA++LGM   +T+HTPLMW  K  TW+LAQ
Sbjct: 125 RGITDIVGGMCETDYSGYPDCRNDTIQALQTALSLGMARDITLHTPLMWRDKAATWQLAQ 184

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           D+GG  LV+LI E+SHTCYLG+R  R++WGYGC  CPAC LR KGW+E+
Sbjct: 185 DLGGDALVDLIREDSHTCYLGERGARHDWGYGCGECPACRLRSKGWIEY 233


>gi|254295715|ref|ZP_04963172.1| exsB protein [Burkholderia pseudomallei 406e]
 gi|157806285|gb|EDO83455.1| exsB protein [Burkholderia pseudomallei 406e]
          Length = 244

 Score =  198 bits (504), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 120/226 (53%), Positives = 173/226 (76%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS+TC++WAL+R+  VETL FDYGQR++VELECR  VR  +    P+W   
Sbjct: 10  ALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVRDALKRRFPQWSHK 69

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG+DH++ L++LG IS +++T+ + ++   N LPNTFVPGRN++F+  AA +AYR G+  
Sbjct: 70  LGDDHLIDLSVLGSISDTAMTRAIEIETALNGLPNTFVPGRNLLFMTIAAAIAYRRGLRA 129

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G+CETD+SGYPDCR DT++A++ A+NLGM++   + TPLMWL K +TW+LA+ +GG 
Sbjct: 130 LVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRFVLETPLMWLDKADTWRLAEQLGGA 189

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            LV LI  E+HTCY+G+R + ++WG+GC  CPAC LR++G+  +  
Sbjct: 190 PLVELIRVETHTCYVGERSELHDWGFGCGECPACKLRKRGYDAYLR 235


>gi|264680395|ref|YP_003280305.1| exsB protein [Comamonas testosteroni CNB-2]
 gi|262210911|gb|ACY35009.1| exsB protein [Comamonas testosteroni CNB-2]
          Length = 253

 Score =  198 bits (504), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 135/229 (58%), Positives = 170/229 (74%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              AL+LFSGGQDS+TCL+ AL  F+RVETL FDYGQR+ VE++ R  VR+++ E  P W
Sbjct: 21  HKGALVLFSGGQDSTTCLAQALAMFERVETLGFDYGQRHSVEMQVRAGVREQLAERFPLW 80

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              LGEDH+L L +L  I  SSLT++VA  +Q + LPNTFVPGRN++FL  A  LAYR G
Sbjct: 81  APRLGEDHVLSLDVLKQIGGSSLTEDVAFAMQADGLPNTFVPGRNLLFLTLAGALAYRRG 140

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +T IV GVCETDYSGYPDCR DT++A + A+NLG+E  + + TPLMWL K +TW+LAQD+
Sbjct: 141 LTVIVTGVCETDYSGYPDCRDDTMKAQQLALNLGLERRLRIDTPLMWLDKAQTWQLAQDL 200

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           GG +LV LI  E+HTCY G RD  +EWGYGC +CPAC LR  GW  ++ 
Sbjct: 201 GGSELVELIRTETHTCYQGTRDALHEWGYGCGNCPACELRASGWHNWRA 249


>gi|78067939|ref|YP_370708.1| ExsB family protein [Burkholderia sp. 383]
 gi|110816218|sp|Q39BV2|QUEC_BURS3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|77968684|gb|ABB10064.1| preQ(0) biosynthesis protein QueC [Burkholderia sp. 383]
          Length = 244

 Score =  198 bits (504), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 122/224 (54%), Positives = 176/224 (78%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS+TC++WAL+R+  VETL FDYGQR++VELECR  VR+ +    P W D 
Sbjct: 10  ALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVREALKRDFPAWSDR 69

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG+DH++ L++LG IS +++T+ + ++   N LPNTFVPGRN++F+  AA +AYR G+  
Sbjct: 70  LGDDHMIDLSVLGAISDTAMTRTIEIETAANGLPNTFVPGRNLMFMTIAAAIAYRRGLRV 129

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G+CETD+SGYPDCR DT++A++ A+NLGM++ V + TPLMWL K +TW+LA+ +GG+
Sbjct: 130 LVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRVVLETPLMWLDKAQTWQLAEQLGGE 189

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            LV LI  E+HTCY+G+R + ++WG+GC  CPAC LR++G+  +
Sbjct: 190 ALVELIRVETHTCYVGERAELHDWGFGCGECPACKLRKRGYEAY 233


>gi|299532639|ref|ZP_07046027.1| exsB protein [Comamonas testosteroni S44]
 gi|298719274|gb|EFI60243.1| exsB protein [Comamonas testosteroni S44]
          Length = 253

 Score =  198 bits (503), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 136/229 (59%), Positives = 170/229 (74%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              AL+LFSGGQDS+TCL+ AL  F+RVETL FDYGQR+ VE++ R  VR+++ E  P W
Sbjct: 21  HKGALVLFSGGQDSTTCLAQALAMFERVETLGFDYGQRHSVEMQVRAGVREQLAERFPLW 80

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              LGEDH+L L +L  I  SSLT++VA  +Q + LPNTFVPGRN++FL  A  LAYR G
Sbjct: 81  APRLGEDHVLSLDVLKQIGGSSLTEDVAFAMQADGLPNTFVPGRNLLFLTLAGALAYRRG 140

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +T IV GVCETDYSGYPDCR DT++A + A+NLG+E  + + TPLMWL K +TW+LAQD+
Sbjct: 141 LTVIVTGVCETDYSGYPDCRDDTMKAQQLALNLGLERRLRIDTPLMWLDKAQTWQLAQDL 200

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           GG +LV LI  E+HTCY G RD  +EWGYGC SCPAC LR  GW  ++ 
Sbjct: 201 GGSELVELIRTETHTCYQGTRDALHEWGYGCGSCPACELRASGWHNWRA 249


>gi|115524890|ref|YP_781801.1| ExsB family transcriptional regulator [Rhodopseudomonas palustris
           BisA53]
 gi|122295935|sp|Q07ML3|QUEC_RHOP5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|115518837|gb|ABJ06821.1| exsB protein [Rhodopseudomonas palustris BisA53]
          Length = 242

 Score =  198 bits (502), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 138/237 (58%), Positives = 174/237 (73%), Gaps = 1/237 (0%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+ I+    +AL+LFSGGQDS+TCL+WALDRF RVET+ FDYGQR+ VEL+ R  +   +
Sbjct: 1   MSQILH-PDAALVLFSGGQDSATCLAWALDRFARVETIGFDYGQRHLVELDSRAKLLDGL 59

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             L P+W   LGE H L +  L  +S ++LT++VA+ +  + LPNTFVPGRN+IFL FAA
Sbjct: 60  KTLKPEWVAKLGETHTLAIPTLAQVSDTALTRDVAIAMGADGLPNTFVPGRNLIFLTFAA 119

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            LAYR GI  I+ G+CETDYSGYPDCR  TI+A+  AINLGM +   +HTPLMWL K  T
Sbjct: 120 ALAYRRGIGAIIGGMCETDYSGYPDCRDATIKALGEAINLGMATQFELHTPLMWLDKAAT 179

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           W LAQ +GG+ LV+LI E SHTCYLG+R  R++WG+GC  CPAC LR KGW EF  +
Sbjct: 180 WGLAQTLGGERLVDLIREHSHTCYLGERGARHDWGFGCGECPACQLRAKGWREFSAQ 236


>gi|107024050|ref|YP_622377.1| ExsB [Burkholderia cenocepacia AU 1054]
 gi|116691137|ref|YP_836760.1| exsB protein [Burkholderia cenocepacia HI2424]
 gi|170734468|ref|YP_001766415.1| exsB protein [Burkholderia cenocepacia MC0-3]
 gi|118574281|sp|Q1BSK1|QUEC_BURCA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|167016412|sp|A0KBJ0|QUEC_BURCH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764312|sp|B1K0I8|QUEC_BURCC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|105894239|gb|ABF77404.1| preQ(0) biosynthesis protein QueC [Burkholderia cenocepacia AU
           1054]
 gi|116649226|gb|ABK09867.1| preQ(0) biosynthesis protein QueC [Burkholderia cenocepacia HI2424]
 gi|169817710|gb|ACA92293.1| exsB protein [Burkholderia cenocepacia MC0-3]
          Length = 244

 Score =  198 bits (502), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 121/224 (54%), Positives = 176/224 (78%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS+TC++WAL+R+  VETL FDYGQR++VELECR  VR+ +    P W D 
Sbjct: 10  ALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVREALKHRFPAWSDR 69

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG+DH++ L++LG IS +++T+ + ++   N LPNTFVPGRN++F+  AA +AYR G+  
Sbjct: 70  LGDDHMIDLSVLGAISDTAMTRTIEIETTANGLPNTFVPGRNLMFMTIAAAIAYRRGLRV 129

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G+CETD+SGYPDCR DT++A++ A+NLGM++ + + TPLMWL K +TW+LA+ +GG+
Sbjct: 130 LVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRMVLETPLMWLDKAQTWQLAEQLGGE 189

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            LV LI  E+HTCY+G+R + ++WG+GC  CPAC LR++G+  +
Sbjct: 190 ALVELIRVETHTCYVGERAELHDWGFGCGECPACKLRKRGYEAY 233


>gi|197106205|ref|YP_002131582.1| exsB protein [Phenylobacterium zucineum HLK1]
 gi|196479625|gb|ACG79153.1| exsB protein [Phenylobacterium zucineum HLK1]
          Length = 241

 Score =  198 bits (502), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 124/231 (53%), Positives = 163/231 (70%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +     +AL+LFSGGQDSS CL+WALDR+DRVET+ FDYGQR+ VEL+ R  VR ++   
Sbjct: 1   MGPMTDAALVLFSGGQDSSVCLAWALDRYDRVETVGFDYGQRHAVELQARQAVRSRLAAG 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
            P+W   LGEDH + +   G I  +++T+  A +I +  LP+T+VPGRN+ FL +AA LA
Sbjct: 61  FPRWAGRLGEDHFIEMRGFGAIGGTAMTQERAFEITEKGLPSTYVPGRNLAFLTYAAALA 120

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            R GI  +V G+CETDYSGYPDCR D I A+E A+NLGM     + TPLM L K +TW L
Sbjct: 121 DRRGIPVLVGGMCETDYSGYPDCRRDAIDAMERALNLGMAQDFRIETPLMRLTKAQTWGL 180

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           A  +GG+ LV+LI+ ESHTCY G+R + + WG+GC  CPAC LR +GW E+
Sbjct: 181 ASRLGGEPLVDLIVRESHTCYRGERGELHAWGHGCGDCPACELRARGWEEW 231


>gi|326314995|ref|YP_004232667.1| exsB protein [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323371831|gb|ADX44100.1| exsB protein [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 236

 Score =  197 bits (501), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 121/224 (54%), Positives = 171/224 (76%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS+TCL+WAL+RF+RVET+ FDYGQR+ VELE R  V   + E  P+W++ 
Sbjct: 6   ALVLFSGGQDSTTCLAWALERFERVETIGFDYGQRHHVELEARTAVLAALRERFPRWRER 65

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LGEDH++ LA+LG IS ++LT++ A+++ +  LPNTFVPGRN++F   AA + YR G+  
Sbjct: 66  LGEDHMVDLAVLGQISDTALTRDTAIQMTEAGLPNTFVPGRNLLFFQLAAAVGYRRGLHT 125

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G+CETD+SGYPDCR DT++A++ A++LGM    T+ TPLMW+ K  TW++A+ +GG 
Sbjct: 126 LVGGMCETDFSGYPDCRDDTLKALQVALSLGMGQRFTIETPLMWIDKAATWEMARQLGGD 185

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           +LV LI+E++HTCY G R   + WG+GC  CPAC LR+ G+  +
Sbjct: 186 ELVRLIVEDTHTCYHGVRGALHAWGHGCGECPACALRRAGYERW 229


>gi|134297294|ref|YP_001121029.1| exsB protein [Burkholderia vietnamiensis G4]
 gi|167016418|sp|A4JIU1|QUEC_BURVG RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|134140451|gb|ABO56194.1| preQ(0) biosynthesis protein QueC [Burkholderia vietnamiensis G4]
          Length = 244

 Score =  197 bits (501), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 121/224 (54%), Positives = 173/224 (77%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS+TC++WAL+R+  VETL FDYGQR++VELECR  VR  +    P W   
Sbjct: 10  ALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVRDALKHRFPAWAGR 69

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG+DH++ L++LG IS +++T+ + ++   N LPNTFVPGRN++F+  AA +AYR G+  
Sbjct: 70  LGDDHMIDLSVLGAISDTAMTRTIEIETAANGLPNTFVPGRNLLFMTIAAAIAYRRGLRV 129

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G+CETD+SGYPDCR DT++A++ A+NLGM++ V + TPLMWL K +TW+LA+ +GG 
Sbjct: 130 LVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRVVLETPLMWLDKAQTWQLAEQLGGA 189

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            LV LI  E+HTCY+G+R + ++WG+GC  CPAC LR++G+  +
Sbjct: 190 ALVELIRVETHTCYVGERAELHDWGFGCGECPACKLRKRGYEAY 233


>gi|91781439|ref|YP_556645.1| ExsB [Burkholderia xenovorans LB400]
 gi|91685393|gb|ABE28593.1| preQ(0) biosynthesis protein QueC [Burkholderia xenovorans LB400]
          Length = 232

 Score =  197 bits (501), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 121/222 (54%), Positives = 172/222 (77%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +LFSGGQDS+TCL+WAL+R++ VETL FDYGQR++VELECR   R  +V   P W D LG
Sbjct: 1   MLFSGGQDSATCLAWALERYETVETLGFDYGQRHRVELECREGFRNAVVRAFPAWADRLG 60

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           EDH++ L++LG IS +++T+ + ++   N LPNTFVPGRN++F+  AA +AYR G+  +V
Sbjct: 61  EDHMIDLSVLGAISDTAMTREIEIEATANGLPNTFVPGRNLMFMTIAAAIAYRRGLQVLV 120

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
            G+CETD+SGYPDCR DT++A++ A+NLGM++   + TPLMWL K +TW+LA ++GG +L
Sbjct: 121 GGMCETDFSGYPDCRDDTMKALQVALNLGMDTRFLLETPLMWLDKADTWRLAHELGGAEL 180

Query: 193 VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           V L+  E+HTCYLG+R + + WG+GC  CPAC LR++G+  +
Sbjct: 181 VELVRVETHTCYLGERAELHAWGFGCGECPACRLRKRGYEAY 222


>gi|206558875|ref|YP_002229635.1| putative putative transcriptional regulator [Burkholderia
           cenocepacia J2315]
 gi|254764313|sp|B4E7W5|QUEC_BURCJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|198034912|emb|CAR50784.1| putative putative transcriptional regulator [Burkholderia
           cenocepacia J2315]
          Length = 244

 Score =  197 bits (501), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 121/224 (54%), Positives = 175/224 (78%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS+TC++WAL+R+  VETL FDYGQR++VELECR  VR+ +    P W D 
Sbjct: 10  ALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVREALKHRFPAWSDR 69

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG+DH++ L++LG IS +++T+ + ++   N LPNTFVPGRN++F+  AA +AYR G+  
Sbjct: 70  LGDDHMIDLSVLGAISDTAMTRTIEIETTANGLPNTFVPGRNLMFMTIAAAIAYRRGLRV 129

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G+CETD+SGYPDCR DT++A++ A+NLGM++ + + TPLMWL K +TW+LA+ +GG 
Sbjct: 130 LVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRMVLETPLMWLDKAQTWQLAEQLGGD 189

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            LV LI  E+HTCY+G+R + ++WG+GC  CPAC LR++G+  +
Sbjct: 190 ALVELIRVETHTCYVGERAELHDWGFGCGECPACKLRKRGYEAY 233


>gi|160896707|ref|YP_001562289.1| exsB protein [Delftia acidovorans SPH-1]
 gi|160362291|gb|ABX33904.1| exsB protein [Delftia acidovorans SPH-1]
          Length = 252

 Score =  197 bits (501), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 125/229 (54%), Positives = 174/229 (75%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS+TCL+ AL  ++RVETL FDYGQR+ VE++ R  VR+++    P+W   
Sbjct: 21  ALVLFSGGQDSTTCLAQALSLYERVETLGFDYGQRHSVEMQVRQQVRERLSRDFPQWAPR 80

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG+DH+L L +L  I  SSLT++VA  +Q + LPNTFVPGRN++FL  A  LAYR G++ 
Sbjct: 81  LGDDHVLSLDVLQQIGGSSLTEDVAFAMQADGLPNTFVPGRNLLFLTLAGALAYRRGLSV 140

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV GVCETDYSGYPDCR DT++A++ A+NLG+E  + + TPLMW+ K +TW++A D+GG 
Sbjct: 141 IVTGVCETDYSGYPDCRDDTMKAMQLALNLGLERRLRIETPLMWIDKAQTWQMAHDLGGD 200

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
            LV+LI  ++HTCY G R+  ++WGYGC +CPAC LR +GW +++ + +
Sbjct: 201 TLVDLIQRDTHTCYQGTRETLHDWGYGCGTCPACDLRARGWHQWQAQRE 249


>gi|171319448|ref|ZP_02908553.1| exsB protein [Burkholderia ambifaria MEX-5]
 gi|171095340|gb|EDT40321.1| exsB protein [Burkholderia ambifaria MEX-5]
          Length = 244

 Score =  197 bits (500), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 121/224 (54%), Positives = 173/224 (77%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS+TC++WAL+R+  VETL FDYGQR++VELECR  VR  +    P W   
Sbjct: 10  ALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVRDALKHQFPAWAGR 69

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG+DH++ L++LG IS +++T+ + ++   N LPNTFVPGRN++F+  AA +AYR G+  
Sbjct: 70  LGDDHMIDLSVLGAISDTAMTRTIEIETTANGLPNTFVPGRNLLFMTIAAAIAYRRGLRV 129

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G+CETD+SGYPDCR DT++A++ A+NLGM++ + + TPLMWL K +TW+LA+ +GG 
Sbjct: 130 LVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRIVLETPLMWLDKAQTWQLAEQLGGD 189

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            LV LI  E+HTCY+G+R + +EWG+GC  CPAC LR++G+  +
Sbjct: 190 ALVELIRVETHTCYVGERAELHEWGFGCGECPACKLRKRGYEAY 233


>gi|33595128|ref|NP_882771.1| hypothetical protein BPP0419 [Bordetella parapertussis 12822]
 gi|81429782|sp|Q7WCA8|QUEC_BORPA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|33565205|emb|CAE36003.1| Conserved hypothetical protein [Bordetella parapertussis]
          Length = 244

 Score =  197 bits (500), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 123/239 (51%), Positives = 171/239 (71%), Gaps = 2/239 (0%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      AL+LFSGGQDS+TCL+WAL+R+  VETL FDYGQR++VEL+ R  V +++   
Sbjct: 6   MQNHQRRALVLFSGGQDSTTCLAWALERYAHVETLGFDYGQRHRVELDARQVVLRELRAN 65

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
            P W   LG+DH+L L IL  +  +++T +  +++Q N LPNTFVPGRN++FL  AA L 
Sbjct: 66  FPDWAQRLGDDHLLDLGILAQVGDTAMTSDREIEMQANGLPNTFVPGRNLLFLTLAAALG 125

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           YR  +  +V G+CETD+SGYPDCR DTI++ +  + LG+ + VT+ TPLMWL K +TW+L
Sbjct: 126 YRRQLDVLVGGMCETDFSGYPDCRDDTIKSQQVTLGLGLGTRVTIETPLMWLDKAQTWEL 185

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF--KEKYQD 240
           A  +GGQ LV++++E SHTCYLG+R +R++WGYGC  CPAC LR+ GW  +     Y D
Sbjct: 186 ADRLGGQALVDMVIEHSHTCYLGERGQRHDWGYGCGHCPACALRKNGWERWVAGAAYAD 244


>gi|163858842|ref|YP_001633140.1| putative exsB protein [Bordetella petrii DSM 12804]
 gi|163262570|emb|CAP44873.1| putative exsB protein [Bordetella petrii]
          Length = 238

 Score =  197 bits (500), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 127/237 (53%), Positives = 178/237 (75%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +   +  AL+LFSGGQDS+TCL+WALDR+  VET++FDYGQR+++EL+ RL V +++   
Sbjct: 1   MQNHSRRALVLFSGGQDSTTCLAWALDRYAHVETVAFDYGQRHRIELDARLNVLRELRAQ 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
            P+W   LGEDH+L L +LG +  +++T   A+++Q N LPNTFVPGRN++FL  AA L 
Sbjct: 61  FPQWAGRLGEDHLLDLRVLGQVGDTAMTSERAIEMQANGLPNTFVPGRNLLFLALAAALG 120

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           YR  +  +V G+CETD+SGYPDCR DTI+A + A+ LG+ + VT+ TPLMW+ K +TW L
Sbjct: 121 YRRQLDVLVGGMCETDFSGYPDCRDDTIKAQQVALGLGLGTRVTIETPLMWIDKADTWAL 180

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
           A+ +GGQ LV LI+E SHTCYLG+R  R++WGYGC +CPAC LR+ GW  ++++  D
Sbjct: 181 ARQLGGQALVALIVEHSHTCYLGERGARHDWGYGCGTCPACALRKAGWQRWRDQAGD 237


>gi|317401137|gb|EFV81788.1| queuosine biosynthesis protein queC [Achromobacter xylosoxidans
           C54]
          Length = 237

 Score =  197 bits (500), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 128/234 (54%), Positives = 174/234 (74%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           ++     AL+LFSGGQDS+TCL+WALDR+  VET++FDYGQR+++EL+ RL V + I   
Sbjct: 1   MLNHQRRALVLFSGGQDSTTCLAWALDRYAHVETVAFDYGQRHRIELDARLNVLRDIRAR 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
            P+W   LGEDH+L L +LG +  +++T + A+++Q N LPNTFVPGRN++FL  AA L 
Sbjct: 61  FPQWAPRLGEDHLLDLKVLGQVGDTAMTSDRAIEMQANGLPNTFVPGRNLLFLTLAAALG 120

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           YR  +  +V G+CETD+SGYPDCR DTI+A + A+ LG+ S VT+ TPLMW+ K ETW L
Sbjct: 121 YRRQLDVLVGGMCETDFSGYPDCRDDTIKAQQVALGLGLGSRVTIETPLMWIDKSETWAL 180

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           A+ +GG  LV  I+EESHTCYLG+R  R+ WGYGC  CPAC LR+ GW +++ +
Sbjct: 181 ARSLGGDALVETIVEESHTCYLGERGARHAWGYGCGECPACKLRRAGWDKWQAQ 234


>gi|115353225|ref|YP_775064.1| exsB protein [Burkholderia ambifaria AMMD]
 gi|172062097|ref|YP_001809749.1| exsB protein [Burkholderia ambifaria MC40-6]
 gi|122321936|sp|Q0BAU3|QUEC_BURCM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764311|sp|B1YPW9|QUEC_BURA4 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|115283213|gb|ABI88730.1| preQ(0) biosynthesis protein QueC [Burkholderia ambifaria AMMD]
 gi|171994614|gb|ACB65533.1| exsB protein [Burkholderia ambifaria MC40-6]
          Length = 244

 Score =  197 bits (500), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 120/224 (53%), Positives = 173/224 (77%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS+TC++WAL+R+  VETL FDYGQR++VELECR  VR  +    P W   
Sbjct: 10  ALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVRDALKHRFPAWAGR 69

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG+DH++ L++LG IS +++T+ + ++   N LPNTFVPGRN++F+  AA +AYR G+  
Sbjct: 70  LGDDHMIDLSVLGAISDTAMTRTIEIETTANGLPNTFVPGRNLLFMTIAAAIAYRRGLRV 129

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G+CETD+SGYPDCR DT++A++ A+NLGM++ + + TPLMWL K +TW+LA+ +GG 
Sbjct: 130 LVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRIVLETPLMWLDKAQTWQLAEQLGGD 189

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            LV LI  E+HTCY+G+R + ++WG+GC  CPAC LR++G+  +
Sbjct: 190 ALVELIRVETHTCYVGERAELHDWGFGCGECPACKLRKRGYEAY 233


>gi|154245818|ref|YP_001416776.1| exsB protein [Xanthobacter autotrophicus Py2]
 gi|154159903|gb|ABS67119.1| exsB protein [Xanthobacter autotrophicus Py2]
          Length = 249

 Score =  197 bits (499), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 131/226 (57%), Positives = 174/226 (76%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS+TCL++AL+RF RVETL F YGQR+ VELE R  +R     L P W   
Sbjct: 12  ALVLFSGGQDSATCLAYALERFGRVETLGFHYGQRHAVELERRPVLRDAFATLKPAWASR 71

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG DH+L + +LG IS ++LT++VA+++ +  LPNTFVPGRN++FL FAA LAYR G+ +
Sbjct: 72  LGADHMLDMPVLGQISETALTRDVAVEMAEGGLPNTFVPGRNLVFLTFAAALAYRRGLRH 131

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           I+ G+CETD+SGYPDCR DT++A++ A+NLGME    +HTPLMW+ K ETW LA+ +GG 
Sbjct: 132 IIGGMCETDFSGYPDCRDDTVKAMQVALNLGMEKRFVLHTPLMWIDKAETWGLAERLGGT 191

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            LV+LI+E++HTCYLG+R KR+ WGYGC  CPAC LR  G+  ++ 
Sbjct: 192 ALVDLIVEDAHTCYLGERGKRHAWGYGCGECPACKLRADGFARYRA 237


>gi|86749826|ref|YP_486322.1| ExsB [Rhodopseudomonas palustris HaA2]
 gi|110816203|sp|Q2IWJ9|QUEC1_RHOP2 RecName: Full=7-cyano-7-deazaguanine synthase 1; AltName:
           Full=7-cyano-7-carbaguanine synthase 1; AltName:
           Full=PreQ(0) synthase 1; AltName: Full=Queuosine
           biosynthesis protein queC 1
 gi|86572854|gb|ABD07411.1| ExsB [Rhodopseudomonas palustris HaA2]
          Length = 238

 Score =  197 bits (499), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 132/237 (55%), Positives = 172/237 (72%), Gaps = 1/237 (0%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M + +    +AL+LFSGGQDS+TCL+WAL RF RVE + FDYGQR+ VEL+CR  +    
Sbjct: 1   MTEPVS-DQTALVLFSGGQDSATCLAWALSRFARVEMIGFDYGQRHAVELDCRAKLLDGF 59

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  +W   LG+ H L +  L  IS ++LT++V + +  + LPNTFVPGRN+IFL FAA
Sbjct: 60  RAISSEWASKLGDSHTLAIPTLSAISDTALTRDVEIAMGADGLPNTFVPGRNLIFLTFAA 119

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            LAYR GI +IV G+CETDYSGYPDCR DTI+A++ AI+LGM     +HTPLMW  K  T
Sbjct: 120 ALAYRRGIADIVGGMCETDYSGYPDCRDDTIKALQGAISLGMARDFELHTPLMWRDKAAT 179

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           W+LA D+GG  LV+LI E SHTCYLG+R +R++WGYGC  CPAC LR +GW E++ +
Sbjct: 180 WQLAHDLGGAALVDLIREHSHTCYLGERGERHDWGYGCGECPACALRARGWREYRTR 236


>gi|316934031|ref|YP_004109013.1| ExsB protein [Rhodopseudomonas palustris DX-1]
 gi|315601745|gb|ADU44280.1| exsB protein [Rhodopseudomonas palustris DX-1]
          Length = 237

 Score =  197 bits (499), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 135/232 (58%), Positives = 176/232 (75%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               +AL+LFSGGQDS+TCL+WALDRF RVET+ FDYGQR+ +EL CR  +   +  +  
Sbjct: 5   SSDKTALVLFSGGQDSATCLAWALDRFARVETIGFDYGQRHLIELACRSRLLDGVRGINA 64

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            W   LG+ H L +  L +IS ++LT++VA+ +  + LPNTFVPGRN+IFL FAA LAYR
Sbjct: 65  DWAAKLGDSHTLTIPTLAEISDTALTRDVAIAMGADGLPNTFVPGRNLIFLTFAAALAYR 124

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            GIT+IV G+CETDYSGYPDCR+DTI+A+++A++LGM   +T+HTPLMW  K  TW+LA+
Sbjct: 125 RGITDIVGGMCETDYSGYPDCRNDTIQALQSALSLGMARDLTLHTPLMWRDKAATWQLAK 184

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           D+GG  LV+LI E+SHTCYLG+R  R+ WGYGC  CPAC LR KGW E+  +
Sbjct: 185 DLGGDALVDLIREDSHTCYLGERGARHAWGYGCGECPACRLRAKGWNEYAAR 236


>gi|221064992|ref|ZP_03541097.1| exsB protein [Comamonas testosteroni KF-1]
 gi|220710015|gb|EED65383.1| exsB protein [Comamonas testosteroni KF-1]
          Length = 253

 Score =  197 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 134/229 (58%), Positives = 170/229 (74%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              AL+LFSGGQDS+TCL+ AL  F+RVETL FDYGQR+ VE++ R  VR+++ +  P+W
Sbjct: 21  HKGALVLFSGGQDSTTCLAQALAMFERVETLGFDYGQRHSVEMQVRAGVREQLAQRFPQW 80

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              LGEDH+L L +L  I  SSLT++VA  +Q + LPNTFVPGRN++FL  A  LAYR G
Sbjct: 81  APRLGEDHVLSLDVLKQIGGSSLTEDVAFAMQADGLPNTFVPGRNLLFLTLAGALAYRRG 140

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +T IV GVCETDYSGYPDCR DT++A + A+NLG+E  + + TPLMWL K +TW+LA D+
Sbjct: 141 LTVIVTGVCETDYSGYPDCRDDTMKAQQLALNLGLERRLRIDTPLMWLDKAQTWQLAHDL 200

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           GG DLV LI  E+HTCY G RD  ++WGYGC SCPAC LR  GW  ++ 
Sbjct: 201 GGSDLVELIRTETHTCYQGTRDVLHDWGYGCGSCPACELRASGWHNWRA 249


>gi|332530017|ref|ZP_08405967.1| ExsB [Hylemonella gracilis ATCC 19624]
 gi|332040490|gb|EGI76866.1| ExsB [Hylemonella gracilis ATCC 19624]
          Length = 234

 Score =  196 bits (498), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 126/230 (54%), Positives = 173/230 (75%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              SAL+LFSGGQDS+TCL+ AL R++RVET++FDY QR+ VEL+ RL V  ++    P 
Sbjct: 1   MHTSALVLFSGGQDSTTCLAHALSRYERVETIAFDYRQRHVVELDARLRVLDELRRAYPH 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           W   LG+DH+L +A+LG +S +SLT+    ++Q N LPNTFVPGRN++FL  AA +AYR 
Sbjct: 61  WASRLGQDHLLDVAVLGAVSETSLTRETEFQMQANGLPNTFVPGRNLLFLTLAAAVAYRR 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +  +V GVCETD+SGYPDCR DT++A++ A++LGM+  + + TPLMW+ K ETW+LA+ 
Sbjct: 121 DLQVLVTGVCETDFSGYPDCRDDTMKAMQLALSLGMDKRLLIETPLMWIDKAETWRLAET 180

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           +GG+ LV LI+E +HTCYLG+RD R+ WGYGC  CPAC LR +GW  ++ 
Sbjct: 181 LGGKRLVELIVEHTHTCYLGERDHRHAWGYGCGHCPACELRARGWERYQA 230


>gi|91977221|ref|YP_569880.1| ExsB [Rhodopseudomonas palustris BisB5]
 gi|123749011|sp|Q136L0|QUEC_RHOPS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|91683677|gb|ABE39979.1| ExsB [Rhodopseudomonas palustris BisB5]
          Length = 238

 Score =  196 bits (497), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 138/237 (58%), Positives = 173/237 (72%), Gaps = 1/237 (0%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M +      +AL+LFSGGQDS+TCL+WAL RF RVE + FDYGQR+ VEL+CR  +    
Sbjct: 1   MTEASSDH-TALVLFSGGQDSATCLAWALSRFARVEMIGFDYGQRHAVELDCRAKLLDGF 59

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             + P+W   LG+ H L +  L  IS ++LT++V + +  + LPNTFVPGRN+IFL FAA
Sbjct: 60  RAISPEWAAKLGDSHTLAIPTLSAISDTALTRDVEIAMGADGLPNTFVPGRNLIFLTFAA 119

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            LAYR GI +IV G+CETDYSGYPDCR DTIRA++ AI+LGM   V +HTPLMW  K  T
Sbjct: 120 ALAYRRGIADIVGGMCETDYSGYPDCRDDTIRALQNAISLGMARDVKLHTPLMWRDKAAT 179

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           W+LAQD+GG  LV+LI+E SHTCYLG+R  R++WGYGC  CPAC LR KGW E+  K
Sbjct: 180 WQLAQDLGGSALVDLIVEHSHTCYLGERGARHDWGYGCGECPACALRAKGWREYSAK 236


>gi|329113418|ref|ZP_08242199.1| 7-cyano-7-deazaguanine synthase [Acetobacter pomorum DM001]
 gi|326697243|gb|EGE48903.1| 7-cyano-7-deazaguanine synthase [Acetobacter pomorum DM001]
          Length = 262

 Score =  195 bits (496), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 142/228 (62%), Positives = 179/228 (78%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL+LFSGGQDS+TCL+WAL+R+ RVETL FDYGQR+ VELECR  +R+ +V   P 
Sbjct: 24  KQESALVLFSGGQDSATCLAWALERYGRVETLGFDYGQRHAVELECRASIRQGLVNQNPT 83

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           W   LG+DH LPL  LG++S +SLT++  + + +N LPNTFVPGRN+IFL FAA LA R 
Sbjct: 84  WASRLGDDHTLPLHALGEVSETSLTRDAEISMAENGLPNTFVPGRNLIFLTFAAALAARR 143

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI +IV GVCETDYSGYPDCR DTI+A++ A+NLGMES   +HTPLMWL K ETW+LA++
Sbjct: 144 GIKHIVTGVCETDYSGYPDCRDDTIKALQVALNLGMESRYVLHTPLMWLDKAETWELAEE 203

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           +GG  LV LI +ESHTCYLG+R   + WG+GC +CPAC LR+ GW ++
Sbjct: 204 LGGHPLVELINKESHTCYLGERGILHAWGHGCGTCPACQLRKSGWDDY 251


>gi|330818677|ref|YP_004362382.1| ExsB protein [Burkholderia gladioli BSR3]
 gi|327371070|gb|AEA62426.1| ExsB protein [Burkholderia gladioli BSR3]
          Length = 244

 Score =  195 bits (496), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 119/225 (52%), Positives = 178/225 (79%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS+TC++WAL+ +  VETL FDYGQR++VELECR  VR+ +    P+W + 
Sbjct: 10  ALVLFSGGQDSATCVAWALEHYSTVETLGFDYGQRHRVELECREGVREALRTRFPQWTNR 69

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG+DH++ L++LG IS +++T+ + ++   N LPNTFVPGRN++F+  AA LAYR G+  
Sbjct: 70  LGDDHMIDLSVLGAISDTAMTRAIEIETSANGLPNTFVPGRNLLFMTIAAALAYRRGLKV 129

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G+CETD+SGYPDCR DT++A++ A+NLGM++ + + TPLMWL K +TW+LA+ +GG 
Sbjct: 130 LVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRMVLETPLMWLDKADTWRLAEQLGGA 189

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           +LV L+  E+HTCY+G+R + ++WG+GC +CPAC LR++G+  ++
Sbjct: 190 ELVELVRVETHTCYVGERAELHDWGFGCGACPACKLRKRGYEAYR 234


>gi|170703436|ref|ZP_02894208.1| exsB protein [Burkholderia ambifaria IOP40-10]
 gi|170131651|gb|EDT00207.1| exsB protein [Burkholderia ambifaria IOP40-10]
          Length = 244

 Score =  195 bits (496), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 119/224 (53%), Positives = 172/224 (76%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS+TC++WAL+R+  VETL FDYGQR++VELECR  VR  +      W   
Sbjct: 10  ALVLFSGGQDSATCVAWALERYQTVETLGFDYGQRHRVELECREGVRDALKHRFTAWAGR 69

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG+DH++ L++LG IS +++T+ + ++   N LPNTFVPGRN++F+  AA +AYR G+  
Sbjct: 70  LGDDHMIDLSVLGAISDTAMTRTIEIETTANGLPNTFVPGRNLLFMTIAAAIAYRRGLRV 129

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G+CETD+SGYPDCR DT++A++ A+NLGM++ + + TPLMWL K +TW+LA+ +GG 
Sbjct: 130 LVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRIVLETPLMWLDKAQTWQLAEQLGGD 189

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            LV LI  E+HTCY+G+R + ++WG+GC  CPAC LR++G+  +
Sbjct: 190 ALVELIRVETHTCYVGERAELHDWGFGCGECPACKLRKRGYEAY 233


>gi|182677257|ref|YP_001831403.1| exsB protein [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182633140|gb|ACB93914.1| exsB protein [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 241

 Score =  195 bits (496), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 125/228 (54%), Positives = 170/228 (74%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              AL+LFSGGQDS+TCL+WALDRF  VET+ F YGQR+ +EL  R  VR  I    P W
Sbjct: 10  NNKALVLFSGGQDSTTCLAWALDRFAFVETIGFSYGQRHVIELTQRQVVRASIARQFPAW 69

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            + LG+DH++ +  L +IS ++LT+++A+++    LPNTFVPGRN++FL FA  L YR G
Sbjct: 70  AERLGDDHLVTIEALAEISQTALTRDMAIEMDAQGLPNTFVPGRNLLFLTFAGALGYRRG 129

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           + +IV G+CETD+SGYPDCR DT++A++ A+NLGM+    + TPLMWL K ETW+LA+ +
Sbjct: 130 LKHIVGGMCETDFSGYPDCRDDTVKAMQVALNLGMDRRFVLETPLMWLDKAETWRLAEAL 189

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           GGQ LV+LI+EE+HTCYLG+R   + WG+GC  CPAC LR KG+  ++
Sbjct: 190 GGQALVDLIIEETHTCYLGERGALHAWGHGCGQCPACVLRAKGYAAYR 237


>gi|307728085|ref|YP_003905309.1| exsB protein [Burkholderia sp. CCGE1003]
 gi|307582620|gb|ADN56018.1| exsB protein [Burkholderia sp. CCGE1003]
          Length = 234

 Score =  195 bits (496), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 125/228 (54%), Positives = 170/228 (74%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               AL+LFSGGQDS+TCL+WALDR+  VET+ FDYGQR+ +ELECR  V   + +  P+
Sbjct: 1   MKTHALVLFSGGQDSTTCLAWALDRYQHVETIGFDYGQRHAIELECRQTVLASLRKQFPE 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           W   LG+DH+L L+ILG IS ++LT   A+++Q N LPNTFVPGRN++F   AA +AYR 
Sbjct: 61  WTCKLGDDHMLDLSILGQISDTALTAGKAIEMQKNGLPNTFVPGRNLLFFTLAAAVAYRR 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G+  +V G+CETDYSGYPDCR  T++A++ AI LGM+  V +  PLMW+ K +TW++A  
Sbjct: 121 GLQVLVGGMCETDYSGYPDCRDSTLKALQVAIALGMDQPVVIEAPLMWIDKAQTWQMASQ 180

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           +GG  LV+LIL+E+HTCY+G    +++WGYGC +CPAC LRQ+G+  F
Sbjct: 181 LGGAKLVDLILDETHTCYVGDHTTQHQWGYGCGTCPACELRQRGYEAF 228


>gi|33591458|ref|NP_879102.1| hypothetical protein BP0214 [Bordetella pertussis Tohama I]
 gi|33571100|emb|CAE40594.1| Conserved hypothetical protein [Bordetella pertussis Tohama I]
 gi|332380859|gb|AEE65706.1| hypothetical protein BPTD_0212 [Bordetella pertussis CS]
          Length = 239

 Score =  195 bits (496), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 121/231 (52%), Positives = 169/231 (73%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      AL+LFSGGQDS+TCL+WAL+R+  VETL FDYGQR++VEL+ R  V +++   
Sbjct: 1   MQNHQRRALVLFSGGQDSTTCLAWALERYAHVETLGFDYGQRHRVELDARQVVLRELRAN 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
            P W   LG+DH+L L IL  +  +++T +  +++Q N LPNTFVPGRN++FL  AA L 
Sbjct: 61  FPDWAQRLGDDHLLDLGILAQVGDTAMTSDREIEMQANGLPNTFVPGRNLLFLTLAAALG 120

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           YR  +  +V G+CETD+SGYPDCR DTI++ +  + LG+ + VT+ TPLMWL K +TW+L
Sbjct: 121 YRRQLDVLVGGMCETDFSGYPDCRDDTIKSQQVTLGLGLGTRVTIETPLMWLDKAQTWEL 180

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           A  +GGQ LV++++E SHTCYLG+R +R++WGYGC  CPAC LR+ GW  +
Sbjct: 181 ADRLGGQALVDMVIEHSHTCYLGERGQRHDWGYGCGHCPACALRKNGWERW 231


>gi|323136676|ref|ZP_08071757.1| exsB protein [Methylocystis sp. ATCC 49242]
 gi|322397993|gb|EFY00514.1| exsB protein [Methylocystis sp. ATCC 49242]
          Length = 240

 Score =  195 bits (495), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 134/227 (59%), Positives = 172/227 (75%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           + SAL+LFSGGQDS+TCL+WAL RF RVETL FDYGQR++VELE R  +R+ I  + P W
Sbjct: 10  SDSALVLFSGGQDSTTCLAWALTRFSRVETLGFDYGQRHRVELERRAALREGIARISPAW 69

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           ++ LGEDH + +  LG IS ++LT+   + +  + LPNTFVPGRN++FL FAA LAYR  
Sbjct: 70  RERLGEDHTISIEALGAISDTALTREAEIAMNVDGLPNTFVPGRNLLFLTFAAALAYRRS 129

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I ++V G+CETDYSGYPDCR  TIRA+  A++LGM+    +HTPLMW+ K  TW+LAQ++
Sbjct: 130 ILDLVGGMCETDYSGYPDCRDGTIRAMAQALSLGMDRAFVIHTPLMWIDKAATWRLAQEL 189

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           GG  LV LI+EESHTCYLG+R + ++WGYGC  CPAC LR  GW  F
Sbjct: 190 GGDALVQLIVEESHTCYLGERGRPFDWGYGCGECPACQLRAAGWERF 236


>gi|312113884|ref|YP_004011480.1| exsB protein [Rhodomicrobium vannielii ATCC 17100]
 gi|311219013|gb|ADP70381.1| exsB protein [Rhodomicrobium vannielii ATCC 17100]
          Length = 242

 Score =  195 bits (495), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 121/235 (51%), Positives = 163/235 (69%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M    + A  +L+L SGGQDS+ CL+WAL  + +VETL F YGQR+ VELECR  +R+ +
Sbjct: 1   MTGTPESATKSLVLLSGGQDSAVCLAWALTNYAQVETLGFSYGQRHSVELECRPKLREAL 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             L P+W   LG DH+L L+ILG +S ++LT +  +    N LPNTFVPGRN++F   AA
Sbjct: 61  AALSPEWAARLGPDHVLDLSILGAVSDTALTSDAEIAFGANGLPNTFVPGRNLLFFTLAA 120

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            L YR GI ++V G+C+TDYSGYPDCR +T++ + +AINLG +    + TPLMW  K ET
Sbjct: 121 ALGYRRGIRDLVGGMCQTDYSGYPDCRDETLQTLASAINLGTDEQFRIVTPLMWRTKAET 180

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           W +   +GG  LV+++ E SHTCY G RD R+EWGYGC +CPAC LR KG+  ++
Sbjct: 181 WAMTHALGGNPLVDIVAEHSHTCYKGVRDHRHEWGYGCGACPACDLRAKGYKAWR 235


>gi|189039058|sp|A5EJ03|QUEC_BRASB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
          Length = 239

 Score =  195 bits (495), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 134/234 (57%), Positives = 182/234 (77%), Gaps = 2/234 (0%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D      +AL+LFSGGQDS+TCL+WALDRF R+ET+ FDYGQR+ +EL+CR  +   +
Sbjct: 1   MSDTHDM--TALVLFSGGQDSTTCLAWALDRFARIETIGFDYGQRHAIELDCRARLLDGL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +L P+W   LG+ H L +  L  IS ++LT++VA+++  + LPNTFVPGRN++FL FAA
Sbjct: 59  AQLRPEWAGKLGDGHTLEIPTLSAISETALTRDVAIEMGADGLPNTFVPGRNLVFLTFAA 118

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            LAYR GI++IV G+CETDYSGYPDCR +TI+A++ A++LGM     +HTPLMWL K  T
Sbjct: 119 ALAYRRGISHIVGGMCETDYSGYPDCRDETIKALQGALSLGMARPFELHTPLMWLSKAAT 178

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           W+LA D+GG+DLV+LI ++SHTCYLG+R  R++WGYGC +CPAC LR +GW E+
Sbjct: 179 WQLAYDLGGRDLVDLIRDQSHTCYLGERGARHDWGYGCGACPACDLRARGWHEY 232


>gi|90424248|ref|YP_532618.1| ExsB [Rhodopseudomonas palustris BisB18]
 gi|110816254|sp|Q213Y7|QUEC_RHOPB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|90106262|gb|ABD88299.1| ExsB [Rhodopseudomonas palustris BisB18]
          Length = 240

 Score =  195 bits (494), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 136/236 (57%), Positives = 176/236 (74%), Gaps = 1/236 (0%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+ I+ +  +AL+LFSGGQDS+TCL+W L RF RVETL FDYGQR+ VEL+CR  +   +
Sbjct: 1   MSQIL-QHDAALVLFSGGQDSATCLAWTLSRFARVETLGFDYGQRHAVELDCRDRLIDGL 59

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++ P W + LG+ H L +  L  IS ++LT++VA+ +  + LPNTFVPGRN++FL FAA
Sbjct: 60  KQIHPDWANKLGDAHTLSIPTLATISDTALTRDVAIAMGADGLPNTFVPGRNLLFLTFAA 119

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            LAYR GI  +V G+CETDYSGYPDCR  T++A+ TA+NLGM +   +HTPLMW  K  T
Sbjct: 120 ALAYRRGIGGLVGGMCETDYSGYPDCRDATLKALTTALNLGMATDFELHTPLMWRDKAAT 179

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           W LAQD+GG  LV+LI E SHTCYLG+R  R++WGYGC  CPAC LR KGW E++E
Sbjct: 180 WALAQDLGGDALVDLIREHSHTCYLGERGARHDWGYGCGECPACQLRAKGWREYRE 235


>gi|148255468|ref|YP_001240053.1| hypothetical protein BBta_4081 [Bradyrhizobium sp. BTAi1]
 gi|146407641|gb|ABQ36147.1| preQ(0) biosynthesis protein QueC [Bradyrhizobium sp. BTAi1]
          Length = 241

 Score =  195 bits (494), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 134/234 (57%), Positives = 182/234 (77%), Gaps = 2/234 (0%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D      +AL+LFSGGQDS+TCL+WALDRF R+ET+ FDYGQR+ +EL+CR  +   +
Sbjct: 3   MSDTHDM--TALVLFSGGQDSTTCLAWALDRFARIETIGFDYGQRHAIELDCRARLLDGL 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +L P+W   LG+ H L +  L  IS ++LT++VA+++  + LPNTFVPGRN++FL FAA
Sbjct: 61  AQLRPEWAGKLGDGHTLEIPTLSAISETALTRDVAIEMGADGLPNTFVPGRNLVFLTFAA 120

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            LAYR GI++IV G+CETDYSGYPDCR +TI+A++ A++LGM     +HTPLMWL K  T
Sbjct: 121 ALAYRRGISHIVGGMCETDYSGYPDCRDETIKALQGALSLGMARPFELHTPLMWLSKAAT 180

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           W+LA D+GG+DLV+LI ++SHTCYLG+R  R++WGYGC +CPAC LR +GW E+
Sbjct: 181 WQLAYDLGGRDLVDLIRDQSHTCYLGERGARHDWGYGCGACPACDLRARGWHEY 234


>gi|91786636|ref|YP_547588.1| ExsB [Polaromonas sp. JS666]
 gi|118574292|sp|Q12FK2|QUEC_POLSJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|91695861|gb|ABE42690.1| preQ(0) biosynthesis protein QueC [Polaromonas sp. JS666]
          Length = 235

 Score =  195 bits (494), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 131/228 (57%), Positives = 176/228 (77%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              SAL+LFSGGQDS+TCL+ AL +++RVET++FDYGQR+KVEL+ RL V ++I    P 
Sbjct: 1   MHTSALVLFSGGQDSTTCLAQALSKYERVETVAFDYGQRHKVELDARLNVLREIKSRFPH 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           W   LGEDH+L LA+LG +S +SLT++VA K++++ LPNTFVPGRN++FL  AA LAYR 
Sbjct: 61  WAPKLGEDHLLDLAVLGQVSDTSLTRDVAFKMENSGLPNTFVPGRNLLFLTLAAALAYRR 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +  +V GVCETD+SGYPDCR DTI+A++ A++LGM+    + TPLMW+ K +TW+LA  
Sbjct: 121 DLQVLVTGVCETDFSGYPDCRDDTIKAMQLALSLGMDKRFLIETPLMWIDKADTWRLAHA 180

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           +GGQ LV+LI+E +HTCYLG R  R  WGYGC +CPAC LR +G+  +
Sbjct: 181 LGGQALVDLIIEHTHTCYLGDRTHRQAWGYGCGACPACELRARGYERY 228


>gi|92117391|ref|YP_577120.1| ExsB [Nitrobacter hamburgensis X14]
 gi|119367948|sp|Q1QM87|QUEC_NITHX RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|91800285|gb|ABE62660.1| preQ(0) biosynthesis protein QueC [Nitrobacter hamburgensis X14]
          Length = 238

 Score =  195 bits (494), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 137/227 (60%), Positives = 175/227 (77%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           + +AL+LFSGGQDS+TCL+WAL RF  VETL FDYGQR+ +EL+CR  +   +  L P W
Sbjct: 7   SRTALVLFSGGQDSATCLAWALQRFAHVETLGFDYGQRHAIELDCRDALLAGMTSLRPDW 66

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            + LGE H L +  L +IS ++LT+NVA+++ +  LPNTFVPGRN++FL FAA LAYR G
Sbjct: 67  AEKLGEGHTLAIPTLAEISDTALTRNVAIEMGEGGLPNTFVPGRNLVFLTFAAALAYRRG 126

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +T+IV G+CETDYSGYPDCR DTI+A++TA+NLGM+    +HTPLMWL K  TW LA ++
Sbjct: 127 MTDIVGGMCETDYSGYPDCRDDTIKALQTALNLGMDKQFELHTPLMWLDKAATWALAHEL 186

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           GG  LV+LI E SHTCYLG+R  R++WGYGC  CPAC LR KGW E+
Sbjct: 187 GGAGLVDLIREHSHTCYLGERGARHDWGYGCGECPACRLRAKGWCEY 233


>gi|83859605|ref|ZP_00953125.1| hypothetical protein OA2633_06389 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83851964|gb|EAP89818.1| hypothetical protein OA2633_06389 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 239

 Score =  194 bits (493), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 122/226 (53%), Positives = 172/226 (76%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS+TCL+WAL RF+RVET+ FDYGQR++VEL+ R  VR ++++  P W + 
Sbjct: 10  ALVLFSGGQDSATCLAWALSRFERVETIGFDYGQRHEVELKARQRVRDEMLKAFPAWAER 69

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LGED ++ L+  G ++ S+LT ++ + + +  LP+TFVPGRN++FL  AA LAYR GI  
Sbjct: 70  LGEDRLVDLSGYGALAESALTADMEIVMTEQGLPSTFVPGRNLVFLTVAAALAYRRGIDV 129

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G+C+TDYSGYPDCR DTI+    A+ LG++    + TPLM L K +TW LA ++GG+
Sbjct: 130 LVGGMCQTDYSGYPDCREDTIQTQARALGLGLDRPTVIETPLMHLDKAQTWLLAHELGGE 189

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            LV+LI+E SHTCY G+R +R++WGYGC+ CPAC LR+ GW +++E
Sbjct: 190 ALVDLIVEHSHTCYRGERGQRHDWGYGCDDCPACDLRKAGWNKWRE 235


>gi|33599410|ref|NP_886970.1| hypothetical protein BB0421 [Bordetella bronchiseptica RB50]
 gi|81432318|sp|Q7WQB2|QUEC_BORBR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|110816214|sp|Q7W0D1|QUEC_BORPE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|33567006|emb|CAE30919.1| Conserved hypothetical protein [Bordetella bronchiseptica RB50]
          Length = 244

 Score =  194 bits (492), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 121/231 (52%), Positives = 169/231 (73%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      AL+LFSGGQDS+TCL+WAL+R+  VETL FDYGQR++VEL+ R  V +++   
Sbjct: 6   MQNHQRRALVLFSGGQDSTTCLAWALERYAHVETLGFDYGQRHRVELDARQVVLRELRAN 65

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
            P W   LG+DH+L L IL  +  +++T +  +++Q N LPNTFVPGRN++FL  AA L 
Sbjct: 66  FPDWAQRLGDDHLLDLGILAQVGDTAMTSDREIEMQANGLPNTFVPGRNLLFLTLAAALG 125

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           YR  +  +V G+CETD+SGYPDCR DTI++ +  + LG+ + VT+ TPLMWL K +TW+L
Sbjct: 126 YRRQLDVLVGGMCETDFSGYPDCRDDTIKSQQVTLGLGLGTRVTIETPLMWLDKAQTWEL 185

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           A  +GGQ LV++++E SHTCYLG+R +R++WGYGC  CPAC LR+ GW  +
Sbjct: 186 ADRLGGQALVDMVIEHSHTCYLGERGQRHDWGYGCGHCPACALRKNGWERW 236


>gi|312797587|ref|YP_004030509.1| Queuosine biosynthesis protein QueC [Burkholderia rhizoxinica HKI
           454]
 gi|312169362|emb|CBW76365.1| Queuosine biosynthesis protein QueC [Burkholderia rhizoxinica HKI
           454]
          Length = 244

 Score =  194 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 124/225 (55%), Positives = 176/225 (78%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS+TC++WAL R++RVETL FDYGQR++VELECR   R  ++   P+WK +
Sbjct: 10  ALVLFSGGQDSATCVAWALSRYERVETLGFDYGQRHRVELECRDGFRDALIRAFPQWKQT 69

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG+DH + L++LG IS +++T+ + ++ Q N LPNTFVPGRN++F+  AA +AYR G+  
Sbjct: 70  LGDDHRVDLSVLGAISDTAMTREIQIETQANGLPNTFVPGRNLMFMTIAAAVAYRRGLGV 129

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G+CETD+SGYPDCR DT++A++ A+NLGM+    + TPLMWL K +TW+LA  IGG+
Sbjct: 130 LVGGMCETDFSGYPDCRDDTMKALQVALNLGMDQRFVLETPLMWLDKADTWRLAASIGGE 189

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            LV LI  E+HTCY+G+R + ++WG+GC +CPAC LR +G+  F+
Sbjct: 190 ALVELIRVETHTCYVGERAELHDWGFGCGACPACRLRARGYHAFR 234


>gi|120608847|ref|YP_968525.1| exsB protein [Acidovorax citrulli AAC00-1]
 gi|189038886|sp|A1TIG3|QUEC_ACIAC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|120587311|gb|ABM30751.1| preQ(0) biosynthesis protein QueC [Acidovorax citrulli AAC00-1]
          Length = 235

 Score =  193 bits (491), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 120/224 (53%), Positives = 167/224 (74%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS+TCL+WAL+RF+RVET+ FDYGQR+ VELE R  V   +    P W   
Sbjct: 6   ALVLFSGGQDSTTCLAWALERFERVETIGFDYGQRHHVELEARTAVLAALRGRFPAWSAR 65

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG+DH++ LA+LG IS ++LT++ A+++ +  LPNTFVPGRN++F   AA + YR G+  
Sbjct: 66  LGDDHMVDLAVLGQISDTALTRDTAIQMTEAGLPNTFVPGRNLLFFQLAAAVGYRRGLHT 125

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G+CETD+SGYPDCR DT++A++ A++LGM    T+ TPLMW+ K ETW++A+ +GG 
Sbjct: 126 LVGGMCETDFSGYPDCRDDTLKALQVALSLGMGQRFTIETPLMWIDKAETWEMARQLGGD 185

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           +LV LI+E++HTCY G R   + WG+GC  CPAC LR+ G   +
Sbjct: 186 ELVQLIVEDTHTCYHGVRGALHAWGHGCGECPACALRRAGHERW 229


>gi|299133865|ref|ZP_07027059.1| exsB protein [Afipia sp. 1NLS2]
 gi|298591701|gb|EFI51902.1| exsB protein [Afipia sp. 1NLS2]
          Length = 235

 Score =  193 bits (491), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 129/226 (57%), Positives = 172/226 (76%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS+TCL+WAL RF RVETL FDYGQR+ +ELECR  + +    L P+WK  
Sbjct: 9   ALVLFSGGQDSATCLAWALSRFARVETLGFDYGQRHAIELECRATLIEGFKRLKPEWKTK 68

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LGE H+L +  L +IS ++LT+++A+++++  LPNTFVPGRN++FL FAA L YR GI +
Sbjct: 69  LGEAHMLAIPTLAEISDTALTRDIAIEMEEGGLPNTFVPGRNLLFLTFAAALGYRRGIRH 128

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G+CETDYSGYPDCR +TI+++  A+N GM     +HTPLMW  K +TW LA ++GG+
Sbjct: 129 IVGGMCETDYSGYPDCRDETIKSLNVALNQGMGRDFELHTPLMWRDKAQTWALAHELGGE 188

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            LV+LI++ SHTCYLG+R   ++WGYGC  CPAC LR  GW ++K 
Sbjct: 189 ALVDLIVQHSHTCYLGERGALHDWGYGCGECPACRLRAAGWEKYKA 234


>gi|300023283|ref|YP_003755894.1| exsB protein [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525104|gb|ADJ23573.1| exsB protein [Hyphomicrobium denitrificans ATCC 51888]
          Length = 232

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 121/228 (53%), Positives = 166/228 (72%), Gaps = 2/228 (0%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           SAL+LFSGGQDS+ CL+WALDR++RVET+ F YGQR+ VEL  R  +R K+  L      
Sbjct: 5   SALVLFSGGQDSTVCLAWALDRYERVETVGFTYGQRHAVELAQRPVIRSKLANLSG--GS 62

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG+D +L L  L  IS ++LT+   +      LP TFVPGRN++FL +AA LAYR GI 
Sbjct: 63  KLGDDAVLDLPALQSISDTALTRETEITFAATGLPTTFVPGRNLLFLTYAAALAYRRGIG 122

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G+CETD+SGYPDCR+ T++A+  A++LG+++H+ + TPLM++ K  TW LA  +GG
Sbjct: 123 TLVGGMCETDFSGYPDCRNATVQALAQALSLGLDTHLEIETPLMFIDKAATWDLADKLGG 182

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           + LV+LI+E++HTCYLG R  R+ WGYGC +CPAC LR KGW E++ +
Sbjct: 183 KALVDLIVEDTHTCYLGDRSHRHAWGYGCGTCPACELRAKGWNEWQAR 230


>gi|212702261|ref|ZP_03310389.1| hypothetical protein DESPIG_00272 [Desulfovibrio piger ATCC 29098]
 gi|212674324|gb|EEB34807.1| hypothetical protein DESPIG_00272 [Desulfovibrio piger ATCC 29098]
          Length = 242

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 125/229 (54%), Positives = 171/229 (74%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL++FSGGQDS+TCL+WAL RF RV TL FDYGQR+ VELECR  VR  I  L P+W+D 
Sbjct: 12  ALVIFSGGQDSATCLAWALSRFARVCTLGFDYGQRHSVELECRGKVRSAIAALKPEWQDR 71

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG D +L +++   ++ ++LT ++ ++ +   +PNTFVPGRN++F++ AA  AY   I +
Sbjct: 72  LGPDTLLDISLFRQLADTALTSDMPIEQEGEGIPNTFVPGRNLLFIMHAAAWAYGKDIRH 131

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V+GVCE+D SGYPDCR D+I+A++ A+N GM+SH  +HTPLMWL K +TW+LA+D+GG 
Sbjct: 132 LVLGVCESDSSGYPDCRDDSIKAMQVALNTGMDSHFVLHTPLMWLDKADTWRLAEDLGGM 191

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
            LV+ ILE+SHTCY G R +RY WGYGC  CPAC LR  G+  +  +Y 
Sbjct: 192 PLVDCILEQSHTCYEGTRGERYPWGYGCGRCPACKLRAHGYEVYLSRYH 240


>gi|329889513|ref|ZP_08267856.1| queuosine biosynthesis protein queC [Brevundimonas diminuta ATCC
           11568]
 gi|328844814|gb|EGF94378.1| queuosine biosynthesis protein queC [Brevundimonas diminuta ATCC
           11568]
          Length = 234

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 126/224 (56%), Positives = 168/224 (75%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +     +AL+LFSGGQDS+TCL+WAL+RFDRVET+ FDYGQR+ VE++ R  VR+++V+ 
Sbjct: 1   MQHSEKTALVLFSGGQDSATCLAWALERFDRVETVGFDYGQRHAVEMQARQSVREELVKA 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +P+W D LG+DH++ L   G I  +++T   A++     LPNTFVPGRN+IFLV AA LA
Sbjct: 61  LPQWADRLGDDHVVDLTGFGAIGETAMTTERAIEADARGLPNTFVPGRNLIFLVAAAALA 120

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            R G+  ++ G+CETDYSGYPDCR+DTI+A   A++LG++  V V TPLM+L K +TW+L
Sbjct: 121 DRRGLEVLIGGMCETDYSGYPDCRNDTIQATARALSLGLDKSVPVETPLMFLTKAQTWEL 180

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLR 227
           A  IGG+ LV  I+E SHTCYLG R  R+ WGYGC +CPAC LR
Sbjct: 181 ADQIGGRVLVKAIIEFSHTCYLGDRTHRHVWGYGCGACPACELR 224


>gi|217976466|ref|YP_002360613.1| exsB protein [Methylocella silvestris BL2]
 gi|217501842|gb|ACK49251.1| exsB protein [Methylocella silvestris BL2]
          Length = 236

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 128/225 (56%), Positives = 174/225 (77%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL LFSGGQDS+TCL++ALDR+D VET+ FDY QR+++EL+ R  +R  ++   P WKD 
Sbjct: 10  ALTLFSGGQDSTTCLAYALDRYDHVETIGFDYDQRHRIELDQRGKIRDALLRDFPAWKDK 69

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LGEDH++ +  L +I+ +++T +V +    N LPNTFVPGRN++FL FA  LAYR G+T 
Sbjct: 70  LGEDHLVRIGALAEIATTAMTHDVEIAFDANGLPNTFVPGRNLLFLTFAGALAYRRGLTQ 129

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           I+ G+CETD+SGYPDCR DT++A++ A+NLGM++   V TPLMWL K  TW+LA+ +GG+
Sbjct: 130 IIGGMCETDFSGYPDCRDDTVKAMQIALNLGMDTRFNVETPLMWLDKAATWRLAERLGGK 189

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            L+ +ILEE+HTCYLG+R KR+ WGYGC  CPAC LR KGW E++
Sbjct: 190 ALIAIILEETHTCYLGERGKRHNWGYGCGECPACQLRAKGWREYR 234


>gi|134096097|ref|YP_001101172.1| regulatory protein [Herminiimonas arsenicoxydans]
 gi|167016429|sp|A4G964|QUEC_HERAR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|133740000|emb|CAL63051.1| Queuosine biosynthesis protein QueC [Herminiimonas arsenicoxydans]
          Length = 233

 Score =  193 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 122/230 (53%), Positives = 175/230 (76%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +  A SAL+LFSGGQDS+TCL+WAL  + RVET+ FDYGQR+ +EL  R  + +K+  + 
Sbjct: 1   MNSANSALVLFSGGQDSTTCLAWALTHYARVETIGFDYGQRHAIELAVRPFLLEKMRLIS 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
           P+W   LG DH++ L+++  IS+++LT NV + + +N LPNTFVPGRN++F+  AAT+AY
Sbjct: 61  PEWDGRLGADHMIDLSLIAKISNTALTSNVEIAMLENGLPNTFVPGRNLLFMTVAATVAY 120

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           R G+  +V G+CETD+SGYPDCR DT++A++  +NLGM + + V TPLMW+ K  TWK+A
Sbjct: 121 RRGLDVLVGGMCETDFSGYPDCRDDTMKALQVTLNLGMATKLKVETPLMWIDKAATWKMA 180

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           QD+GG  L+NL+   +HTCYLG+R + ++WGYGC +CPAC LR +G+ +F
Sbjct: 181 QDLGGTPLLNLVRTGTHTCYLGERGELHDWGYGCGNCPACKLRARGYADF 230


>gi|171060676|ref|YP_001793025.1| exsB protein [Leptothrix cholodnii SP-6]
 gi|254764357|sp|B1Y8J4|QUEC_LEPCP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|170778121|gb|ACB36260.1| exsB protein [Leptothrix cholodnii SP-6]
          Length = 235

 Score =  193 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 126/231 (54%), Positives = 175/231 (75%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + + +AL+LFSGGQDS+TCL+WAL RF  VETL+FDYGQR+++EL+CRL V  ++ E 
Sbjct: 1   MNRDSRTALVLFSGGQDSTTCLAWALTRFAHVETLAFDYGQRHRIELDCRLTVLAQLREQ 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
            P W + LG DH+L L++L  IS ++LT    +++Q N LPNTFVPGRN++FL  AATLA
Sbjct: 61  FPDWAERLGADHLLDLSLLAQISDTALTTEREIELQANGLPNTFVPGRNLLFLGMAATLA 120

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           YR   + +V G+CETDYSGYPDCR +T++A++ A++LG+ + +T+ TPLM+L K +TW L
Sbjct: 121 YRRSASVLVGGMCETDYSGYPDCRDNTLKALQVALSLGLAAPMTIETPLMFLTKAQTWTL 180

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           A+D+GG  LV LI E +HTCYLG+R +R+ WG+GC  CPAC LR  G   +
Sbjct: 181 AEDLGGAPLVELITEHTHTCYLGERGQRHAWGHGCGHCPACELRHAGHAAW 231


>gi|146340791|ref|YP_001205839.1| putative ExsB [Bradyrhizobium sp. ORS278]
 gi|146193597|emb|CAL77614.1| conserved hypothetical protein; putative ExsB [Bradyrhizobium sp.
           ORS278]
          Length = 248

 Score =  193 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 132/231 (57%), Positives = 176/231 (76%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + ++  +AL+LFSGGQDS+TCL+WALDRF RVET+ F YGQR+ +EL+CR  +R  I +L
Sbjct: 13  MSEQDATALVLFSGGQDSTTCLAWALDRFARVETIGFSYGQRHGIELDCRARLRDGIAQL 72

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              W D LG +H L +  L  IS ++LT++VA+++  + LPNTFVPGRN++FL FAA LA
Sbjct: 73  RADWADKLGCEHTLDIPTLAAISETALTRDVAIEMGADGLPNTFVPGRNLVFLTFAAALA 132

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           YR GI +IV G+CETDYSGYPDCR +TI+A++ A++LGM     +HTPLMWL K  TW+L
Sbjct: 133 YRRGIRHIVGGMCETDYSGYPDCRDETIKALQVALSLGMARPFELHTPLMWLTKAATWQL 192

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           A D+GG+ LV+LI +ESHTCYLG+R  R++WG+GC  CPAC LR  GW  +
Sbjct: 193 AHDLGGRGLVDLIRDESHTCYLGERGARHDWGHGCGRCPACELRAHGWRAY 243


>gi|241764890|ref|ZP_04762892.1| exsB protein [Acidovorax delafieldii 2AN]
 gi|241365549|gb|EER60291.1| exsB protein [Acidovorax delafieldii 2AN]
          Length = 234

 Score =  193 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 119/230 (51%), Positives = 167/230 (72%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   AL+LFSGGQDS+TCL+WAL  F+ VET+ FDYGQR++VEL+ R  V   +    P+
Sbjct: 2   RPGHALVLFSGGQDSTTCLAWALAHFEHVETIGFDYGQRHQVELQARQQVLTALRTAFPQ 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           W++ LG+DH++ LA+LG IS ++LT+   + +    LPNTFVPGRN++F   AA + YR 
Sbjct: 62  WRERLGDDHMIDLAVLGQISDTALTRETEIVMDAAGLPNTFVPGRNLLFFQLAAAVGYRR 121

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G+  +V G+CETD+SGYPDCR DT++A++ A++LGM    T  TPLMWL K  TW++A  
Sbjct: 122 GLHTLVGGMCETDFSGYPDCRDDTLKALQVAVSLGMGQRFTFETPLMWLDKAATWEMAHT 181

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           +GG  LV++ILE+SHTCY G R+ R+ WGYGC +CPAC LR+ G+  ++ 
Sbjct: 182 LGGPALVDIILEQSHTCYHGVREVRHAWGYGCGTCPACALRKAGYERWQA 231


>gi|187476833|ref|YP_784857.1| hypothetical protein BAV0319 [Bordetella avium 197N]
 gi|110816213|sp|Q2KZT1|QUEC_BORA1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|115421419|emb|CAJ47924.1| conserved hypothetical protein [Bordetella avium 197N]
          Length = 244

 Score =  193 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 126/234 (53%), Positives = 175/234 (74%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      AL+LFSGGQDS+TCL+WALDR+  VET++FDYGQR+++EL+ RL V ++I   
Sbjct: 8   MQNHQRRALVLFSGGQDSTTCLAWALDRYAHVETVAFDYGQRHRIELDARLNVLREIRGR 67

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
            P W   LG+DH+L L +LG +  +++T + A+++Q N LPNTFVPGRN++FL  AA L 
Sbjct: 68  FPAWAARLGQDHLLDLKVLGQVGDTAMTSDRAIEMQANGLPNTFVPGRNLLFLTLAAALG 127

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           YR  +  +V G+CETD+SGYPDCR DT++A + A++LG+ S VT+ TPLMWL K +TW L
Sbjct: 128 YRRQLDVLVGGMCETDFSGYPDCRDDTMKAQQVALSLGLGSRVTIETPLMWLDKADTWAL 187

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           A  +GG+ LV  I+EESHTCY+G+R +R++WGYGC  CPAC LR+ GW  + E+
Sbjct: 188 ADSLGGESLVQTIVEESHTCYVGERGQRHDWGYGCGECPACVLRKAGWSRWAER 241


>gi|189039059|sp|A4YUN8|QUEC_BRASO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
          Length = 236

 Score =  193 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 132/231 (57%), Positives = 176/231 (76%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + ++  +AL+LFSGGQDS+TCL+WALDRF RVET+ F YGQR+ +EL+CR  +R  I +L
Sbjct: 1   MSEQDATALVLFSGGQDSTTCLAWALDRFARVETIGFSYGQRHGIELDCRARLRDGIAQL 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              W D LG +H L +  L  IS ++LT++VA+++  + LPNTFVPGRN++FL FAA LA
Sbjct: 61  RADWADKLGCEHTLDIPTLAAISETALTRDVAIEMGADGLPNTFVPGRNLVFLTFAAALA 120

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           YR GI +IV G+CETDYSGYPDCR +TI+A++ A++LGM     +HTPLMWL K  TW+L
Sbjct: 121 YRRGIRHIVGGMCETDYSGYPDCRDETIKALQVALSLGMARPFELHTPLMWLTKAATWQL 180

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           A D+GG+ LV+LI +ESHTCYLG+R  R++WG+GC  CPAC LR  GW  +
Sbjct: 181 AHDLGGRGLVDLIRDESHTCYLGERGARHDWGHGCGRCPACELRAHGWRAY 231


>gi|170748385|ref|YP_001754645.1| exsB protein [Methylobacterium radiotolerans JCM 2831]
 gi|170654907|gb|ACB23962.1| exsB protein [Methylobacterium radiotolerans JCM 2831]
          Length = 239

 Score =  193 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 136/224 (60%), Positives = 174/224 (77%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS+TCL+WALDRFD VETL FDYGQR++VEL+ R  +R     L P W   
Sbjct: 13  ALVLFSGGQDSATCLAWALDRFDHVETLGFDYGQRHRVELDRRAALRAGTTALDPAWAAR 72

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG+DH L L  LG +S ++LT+  A+  + + LPNTFVPGRN++FL FAA LAYR G+ +
Sbjct: 73  LGDDHTLALDALGQVSETALTREAAIGYEASGLPNTFVPGRNLVFLTFAAALAYRRGLRH 132

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G+CETDYSGYPDCR DTI+A++ A+NLGME    +HTPLMWL K +TW+LA+ +GG+
Sbjct: 133 VVGGMCETDYSGYPDCRDDTIKALQVALNLGMERRFVLHTPLMWLDKAQTWELAESLGGR 192

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            LV+LI+EESHTCYLG+R +R+ WGYGC +CPAC LR  G+  F
Sbjct: 193 ALVDLIVEESHTCYLGERGQRHPWGYGCGTCPACRLRADGYARF 236


>gi|114799592|ref|YP_759261.1| exsB protein [Hyphomonas neptunium ATCC 15444]
 gi|123028353|sp|Q0C4T2|QUEC_HYPNA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|114739766|gb|ABI77891.1| exsB protein [Hyphomonas neptunium ATCC 15444]
          Length = 239

 Score =  192 bits (488), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 124/232 (53%), Positives = 167/232 (71%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +   SAL+LFSGGQDS+TCL+WALDRFDRVET+ FDYGQR+ +EL CR  VR  I ++
Sbjct: 1   MTQPISSALVLFSGGQDSATCLAWALDRFDRVETIGFDYGQRHAIELACRPKVRAAIRQM 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
            P W + LGEDH++   +L  +  +++T  V + +    LPNTFVPGRN++F   A  LA
Sbjct: 61  SPVWAEKLGEDHMIDAGVLKSLGATAMTHEVEISMTAAGLPNTFVPGRNLLFFTLAGALA 120

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            R GI  +V G+CETDYSGYPDCR DT++A E  + LG+++ + +  PLM+L K  TW+L
Sbjct: 121 VRRGIGVLVGGMCETDYSGYPDCRADTLKAQEQTLRLGLDADIRIDAPLMYLDKAATWQL 180

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           AQ++GG  LV LI EE+HTCYLG+R  R++WGYGC +CPAC LR  GW  ++
Sbjct: 181 AQELGGDALVALIGEETHTCYLGERGARHDWGYGCGTCPACELRSNGWQRWQ 232


>gi|329912653|ref|ZP_08275781.1| Queuosine Biosynthesis QueC ATPase [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327545570|gb|EGF30744.1| Queuosine Biosynthesis QueC ATPase [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 235

 Score =  192 bits (486), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 120/233 (51%), Positives = 171/233 (73%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +     AL+LFSGGQDS+TC++WAL R+ RVET+ FDYGQR+ +E+  R  V   +    
Sbjct: 1   MTLPNGALVLFSGGQDSTTCVAWALQRYARVETIGFDYGQRHAIEMTVRPDVLASLRTQS 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
           P W   LGEDH++ L+++G IS ++LT NV + + +N LPNTFVPGRN++F++ AATLAY
Sbjct: 61  PDWDHRLGEDHVIDLSLIGKISDTALTSNVEIAMLENGLPNTFVPGRNLLFMMVAATLAY 120

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           R G+  +V G+CETD+SGYPDCR DT++A++  +NLGM + + + TPLMW+ K  TW LA
Sbjct: 121 RRGLDVLVGGMCETDFSGYPDCRDDTMKALQVTLNLGMATRLKLETPLMWIDKAATWALA 180

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           + +GG  LV+LI   +HTCYLG+R   ++WGYGC +CPAC LR KG+  ++++
Sbjct: 181 ESLGGDTLVDLIRTGTHTCYLGERGALHDWGYGCGTCPACALRAKGYAGYRQR 233


>gi|189039056|sp|A1VJX7|QUEC_POLNA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
          Length = 239

 Score =  191 bits (485), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 129/229 (56%), Positives = 175/229 (76%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +   SAL+LFSGGQDS+TCL+ AL +++RVET++FDYGQR+KVEL+ RL V +++    P
Sbjct: 7   RAHTSALVLFSGGQDSTTCLAQALAKYERVETIAFDYGQRHKVELQARLNVLRELKSQFP 66

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +W   LGEDH+L LA+LG +S  SLT++VA K++ + LPNTFVPGRN++FL  AA LAYR
Sbjct: 67  QWAAKLGEDHLLDLAVLGQVSDCSLTRDVAFKMESSGLPNTFVPGRNLLFLTLAAALAYR 126

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
             +  +V GVCETD+SGYPDCR DT++A++ A++LGM+    + TPLMW+ K +TW LA+
Sbjct: 127 RDLQVLVTGVCETDFSGYPDCRDDTMKAMQLALSLGMDKRFLIETPLMWIDKADTWALAE 186

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            +GGQ LV LI+E +HTCYLG R  R+ WGYGC  CPAC LR +G+  +
Sbjct: 187 SLGGQPLVELIIEHTHTCYLGDRIHRHAWGYGCGQCPACELRARGYARY 235


>gi|209885226|ref|YP_002289083.1| ExsB protein [Oligotropha carboxidovorans OM5]
 gi|209873422|gb|ACI93218.1| ExsB protein [Oligotropha carboxidovorans OM5]
          Length = 239

 Score =  191 bits (485), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 130/238 (54%), Positives = 173/238 (72%), Gaps = 2/238 (0%)

Query: 1   MNDIIKKA--PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           MN+ + K    +AL+LFSGGQDS+TCL+W L RF RVET+ FDYGQR+ +ELECR  + +
Sbjct: 1   MNNPLDKPLDDAALVLFSGGQDSATCLAWVLSRFARVETVGFDYGQRHAIELECRSTLIE 60

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
           +   + P+WK  LGE H L +  L +IS ++LT+++A+++    LPNTFVPGRN++FL  
Sbjct: 61  RFKAIKPEWKARLGEAHTLAIPTLAEISDTALTRDIAIEMDKGGLPNTFVPGRNLLFLTL 120

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
           AA L YR GI +IV G+CETDYSGYPDCR +TI+++  AIN GM     +HTPLMW  K 
Sbjct: 121 AAALGYRRGIRHIVGGMCETDYSGYPDCRDETIKSLNVAINQGMGRDFELHTPLMWRDKG 180

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           ETW LA ++GG  LV+LI++ SHTCYLG+R   ++WGYGC  CPAC LR  GW ++K 
Sbjct: 181 ETWALAHELGGDALVDLIVQHSHTCYLGERGALHDWGYGCGECPACRLRAAGWAKYKT 238


>gi|103488120|ref|YP_617681.1| ExsB [Sphingopyxis alaskensis RB2256]
 gi|118574279|sp|Q1GPS4|QUEC2_SPHAL RecName: Full=7-cyano-7-deazaguanine synthase 2; AltName:
           Full=7-cyano-7-carbaguanine synthase 2; AltName:
           Full=PreQ(0) synthase 2; AltName: Full=Queuosine
           biosynthesis protein queC 2
 gi|98978197|gb|ABF54348.1| ExsB [Sphingopyxis alaskensis RB2256]
          Length = 236

 Score =  191 bits (485), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 128/223 (57%), Positives = 169/223 (75%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS+TCL+WALDRF+ VET+ FDYGQR++VELECR   R +IVEL P W   
Sbjct: 7   ALVLFSGGQDSATCLAWALDRFETVETVGFDYGQRHRVELECRDDFRARIVELNPAWAAR 66

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG DH L L++LG +S ++LT++  + ++ + LPNTFVPGRN++F   AA LA R  + +
Sbjct: 67  LGPDHKLDLSVLGQVSETALTRDAEIALRADGLPNTFVPGRNLLFFTLAAALASRRELRH 126

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G+CETDYSGYPDCR DT+++++  +NLG+ S   VHTPLMWL K +TW LA+ +GG+
Sbjct: 127 LVGGMCETDYSGYPDCRDDTLKSLQVTLNLGIGSRSVVHTPLMWLDKAQTWGLAKILGGE 186

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
            LV+LI   +HTCY G  D+  +WGYGC +CPAC LR KGW E
Sbjct: 187 KLVDLIRTGTHTCYRGDHDRLQDWGYGCGTCPACELRMKGWQE 229


>gi|121603547|ref|YP_980876.1| exsB protein [Polaromonas naphthalenivorans CJ2]
 gi|120592516|gb|ABM35955.1| preQ(0) biosynthesis protein QueC [Polaromonas naphthalenivorans
           CJ2]
          Length = 241

 Score =  191 bits (485), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 129/229 (56%), Positives = 175/229 (76%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +   SAL+LFSGGQDS+TCL+ AL +++RVET++FDYGQR+KVEL+ RL V +++    P
Sbjct: 9   RAHTSALVLFSGGQDSTTCLAQALAKYERVETIAFDYGQRHKVELQARLNVLRELKSQFP 68

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +W   LGEDH+L LA+LG +S  SLT++VA K++ + LPNTFVPGRN++FL  AA LAYR
Sbjct: 69  QWAAKLGEDHLLDLAVLGQVSDCSLTRDVAFKMESSGLPNTFVPGRNLLFLTLAAALAYR 128

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
             +  +V GVCETD+SGYPDCR DT++A++ A++LGM+    + TPLMW+ K +TW LA+
Sbjct: 129 RDLQVLVTGVCETDFSGYPDCRDDTMKAMQLALSLGMDKRFLIETPLMWIDKADTWALAE 188

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            +GGQ LV LI+E +HTCYLG R  R+ WGYGC  CPAC LR +G+  +
Sbjct: 189 SLGGQPLVELIIEHTHTCYLGDRIHRHAWGYGCGQCPACELRARGYARY 237


>gi|311109100|ref|YP_003981953.1| queuosine biosynthesis protein QueC [Achromobacter xylosoxidans A8]
 gi|310763789|gb|ADP19238.1| queuosine biosynthesis protein QueC [Achromobacter xylosoxidans A8]
          Length = 239

 Score =  191 bits (485), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 127/231 (54%), Positives = 168/231 (72%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      AL+LFSGGQDS+TCL+WAL+R+  VET++FDYGQR+ +EL  RL V + I   
Sbjct: 1   MQNHQRRALVLFSGGQDSTTCLAWALERYAHVETVAFDYGQRHHIELSARLNVLRDIRNN 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
            P W   LGEDH+L L +LG +  +++T + A+++Q N LPNTFVPGRN++FL  AA L 
Sbjct: 61  FPDWAPRLGEDHLLDLKVLGQVGDTAMTSDRAIEMQANGLPNTFVPGRNLLFLTLAAALG 120

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           YR  +  +V G+CETD+SGYPDCR DTI+A + A+ LG+ S VT+ TPLMW+ K ETW L
Sbjct: 121 YRRQLDVLVGGMCETDFSGYPDCRDDTIKAQQVALGLGLGSRVTIETPLMWIDKSETWAL 180

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           A  +GG  LV  I+EESHTCYLG+R  R++WGYGC  CPAC LR+ GW ++
Sbjct: 181 AHQLGGDALVETIVEESHTCYLGERGARHDWGYGCGECPACKLRKIGWEKW 231


>gi|56551919|ref|YP_162758.1| exsB protein [Zymomonas mobilis subsp. mobilis ZM4]
 gi|81355074|sp|Q5NNR3|QUEC_ZYMMO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|56543493|gb|AAV89647.1| exsB protein [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 254

 Score =  191 bits (485), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 127/226 (56%), Positives = 179/226 (79%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L+L+SGGQDS+TCL+WAL+ FDRVET+ FDYGQR+KVELECR  +++K+++  P W   
Sbjct: 26  CLVLYSGGQDSATCLAWALEHFDRVETIGFDYGQRHKVELECRENLKQKLIQNFPDWAAH 85

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LGEDH+L LA+L  +S  +LT+   +   ++ +PN+FVPGRN++F  FAAT+AYR G+ +
Sbjct: 86  LGEDHMLDLAVLHQVSDCALTRETEIAFGEDGIPNSFVPGRNLLFFTFAATIAYRRGLRH 145

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G+CETDYSGYPDCR DTI+A++ AINLG+E  + +HTPLMWL K  TW++A+++GG+
Sbjct: 146 IVGGMCETDYSGYPDCRDDTIKALQVAINLGLERRLVLHTPLMWLDKASTWQMAEEVGGK 205

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           +LV +I +ESH+CYLG+R+  ++WGYGC  CPAC LR  GW  +++
Sbjct: 206 ELVEIIRQESHSCYLGEREILHDWGYGCGHCPACELRAAGWESYQK 251


>gi|75675645|ref|YP_318066.1| ExsB [Nitrobacter winogradskyi Nb-255]
 gi|110816237|sp|Q3SSM7|QUEC_NITWN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|74420515|gb|ABA04714.1| preQ(0) biosynthesis protein QueC [Nitrobacter winogradskyi Nb-255]
          Length = 238

 Score =  191 bits (485), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 136/230 (59%), Positives = 172/230 (74%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           + +AL+LFSGGQDS+TCL+WAL RF RVETL FDYGQR+ +EL+CR  +   +  L P W
Sbjct: 7   SRTALVLFSGGQDSATCLAWALQRFARVETLGFDYGQRHAIELDCRDSLLAGMASLRPDW 66

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              LGE H L +  L +IS ++LT+NVA+++ ++ LPNTFVPGRN++FL FAA LAYR G
Sbjct: 67  AKKLGETHTLAIPTLAEISDTALTRNVAIEVSESGLPNTFVPGRNLVFLTFAAALAYRRG 126

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +T+IV G+CETDYSGYPDCR +TIRA+  A+NLGM     +HTPLM L K  TW LA ++
Sbjct: 127 VTDIVGGMCETDYSGYPDCRDETIRALRIALNLGMVRQFELHTPLMRLDKGATWSLAHEL 186

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           GG  LV+LI E SHTCYLG+R  R+ WGYGC  CPAC LR KGW E+  +
Sbjct: 187 GGTGLVDLIREHSHTCYLGERGARHAWGYGCGECPACGLRAKGWREYLAR 236


>gi|293602126|ref|ZP_06684578.1| transcription regulator ExsB [Achromobacter piechaudii ATCC 43553]
 gi|292819462|gb|EFF78491.1| transcription regulator ExsB [Achromobacter piechaudii ATCC 43553]
          Length = 239

 Score =  191 bits (484), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 128/231 (55%), Positives = 168/231 (72%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      AL+LFSGGQDS+TCL+WALDR+  VET++FDYGQR+ +EL  RL V + I   
Sbjct: 1   MQNHQRRALVLFSGGQDSTTCLAWALDRYAHVETVAFDYGQRHHIELSARLNVLRDIRAN 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
            P W   LGEDH+L L +LG +  +++T + A+++Q N LPNTFVPGRN++FL  AA L 
Sbjct: 61  FPDWAPRLGEDHLLDLKVLGQVGDTAMTSDRAIEMQANGLPNTFVPGRNLLFLTLAAALG 120

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           YR  +  +V G+CETD+SGYPDCR DTI+A + A+ LG+ S VT+ TPLMW+ K ETW L
Sbjct: 121 YRRQLDVLVGGMCETDFSGYPDCRDDTIKAQQVALGLGLGSRVTIETPLMWIDKSETWAL 180

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           A  +GG  LV  I+EESHTCYLG+R  R++WGYGC  CPAC LR+ GW ++
Sbjct: 181 AYQLGGDALVETIVEESHTCYLGERGARHDWGYGCGECPACKLRKIGWEKW 231


>gi|241761765|ref|ZP_04759851.1| exsB protein [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|260752525|ref|YP_003225418.1| exsB protein [Zymomonas mobilis subsp. mobilis NCIMB 11163]
 gi|241373679|gb|EER63239.1| exsB protein [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|258551888|gb|ACV74834.1| exsB protein [Zymomonas mobilis subsp. mobilis NCIMB 11163]
          Length = 254

 Score =  191 bits (484), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 126/226 (55%), Positives = 179/226 (79%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L+L+SGGQDS+TCL+WAL+ FDRVET+ FDYGQR+K+ELECR  +++K+++  P W   
Sbjct: 26  CLVLYSGGQDSATCLAWALEHFDRVETIGFDYGQRHKIELECRENLKQKLIQNFPDWAAH 85

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LGEDH+L LA+L  +S  +LT+   +   ++ +PN+FVPGRN++F  FAAT+AYR G+ +
Sbjct: 86  LGEDHMLDLAVLHQVSDCALTRETEIAFGEDGIPNSFVPGRNLLFFTFAATIAYRRGLRH 145

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G+CETDYSGYPDCR DTI+A++ AINLG+E  + +HTPLMWL K  TW++A+++GG+
Sbjct: 146 IVGGMCETDYSGYPDCRDDTIKALQVAINLGLERRLVLHTPLMWLDKASTWQMAEEVGGK 205

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           +LV +I +ESH+CYLG+R+  ++WGYGC  CPAC LR  GW  +++
Sbjct: 206 ELVEIIRQESHSCYLGEREILHDWGYGCGHCPACELRAAGWESYQK 251


>gi|296536223|ref|ZP_06898341.1| transcription regulator ExsB [Roseomonas cervicalis ATCC 49957]
 gi|296263445|gb|EFH09952.1| transcription regulator ExsB [Roseomonas cervicalis ATCC 49957]
          Length = 248

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 132/227 (58%), Positives = 175/227 (77%), Gaps = 3/227 (1%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS+TCL+WAL RF RVETL FDYGQR+++ELECR   R  + E    W+  
Sbjct: 24  ALVLFSGGQDSATCLAWALTRFARVETLGFDYGQRHRIELECRAGFRDGLPE---DWQAR 80

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG DH L L  LG++S ++LT+   + +Q + LPNTFVPGRN++FL FAA LAYR G+ +
Sbjct: 81  LGPDHTLRLDALGELSDTALTRETEIAMQADGLPNTFVPGRNLLFLTFAAALAYRRGLRH 140

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G+CETD+SGYPDCR DT++A++ A+NLGME    +HTPLMWL K ETW+LA+ +GGQ
Sbjct: 141 IVGGMCETDFSGYPDCRDDTLKALQVALNLGMERRFVLHTPLMWLDKGETWELAERLGGQ 200

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            LV  I+E++HTCY G+R +R+ WG+GC +CPAC LR +GW E++ +
Sbjct: 201 KLVCDIVEKTHTCYRGERGERHPWGHGCAACPACELRARGWAEYRSR 247


>gi|296447515|ref|ZP_06889438.1| exsB protein [Methylosinus trichosporium OB3b]
 gi|296254982|gb|EFH02086.1| exsB protein [Methylosinus trichosporium OB3b]
          Length = 238

 Score =  190 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 136/227 (59%), Positives = 176/227 (77%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           SAL+LFSGGQDS+TCL++AL RF RVET+ FDYGQR++VEL+ R  +R  +  L P W +
Sbjct: 11  SALVLFSGGQDSATCLAFALSRFARVETIGFDYGQRHRVELDQRAVLRAGMASLSPLWAE 70

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LGEDH + +  LG +S ++LT+  A+      LPNTFVPGRNI+FL FAA LAYR GI 
Sbjct: 71  RLGEDHTVSIEALGALSETALTREAAIAFDSTGLPNTFVPGRNILFLTFAAALAYRRGIG 130

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
           ++V G+CETDYSGYPDCR  TIRA+ETA+ LGM+  +T+HTPLMW+ K  TW+LA+++GG
Sbjct: 131 DLVGGMCETDYSGYPDCRDATIRAVETALRLGMDRPLTIHTPLMWIDKAATWRLARELGG 190

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           + LV+LI+EESHTCYLG+R KR++WG+GC  CPAC LR  GW  F+ 
Sbjct: 191 EALVSLIVEESHTCYLGERGKRFDWGHGCGECPACRLRAAGWENFRA 237


>gi|58039976|ref|YP_191940.1| putative aluminum resistance protein [Gluconobacter oxydans 621H]
 gi|81351795|sp|Q5FQR2|QUEC_GLUOX RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|58002390|gb|AAW61284.1| Putative aluminum resistance protein [Gluconobacter oxydans 621H]
          Length = 242

 Score =  190 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 130/233 (55%), Positives = 173/233 (74%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +   + +AL+LFSGGQDS+TCL+WAL RFDRVET+ + YGQR+ +ELECR  +R ++   
Sbjct: 1   MTISSNTALVLFSGGQDSATCLAWALSRFDRVETVGYAYGQRHAIELECRETLRNEMAAF 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
            P WK  LGEDH + LA LG +S ++LT+   + + +N LPNTFVPGRNIIFL FAA LA
Sbjct: 61  SPDWKARLGEDHTIDLASLGALSETALTREAEIGLSENGLPNTFVPGRNIIFLTFAAALA 120

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            R    +IV GVCETDYSGYPDCR DTI+A++  +NLGM+    +HTPLMW+ K +TW L
Sbjct: 121 ARRNARHIVTGVCETDYSGYPDCRDDTIKALQVTLNLGMDQRFVLHTPLMWIDKAQTWDL 180

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            +++GGQ LVNLI  +SH+CY+G R  +++WGYGC +CPAC LR  GW  +++
Sbjct: 181 TEELGGQKLVNLINRDSHSCYMGDRTHQHDWGYGCGTCPACNLRADGWRRYQQ 233


>gi|220904355|ref|YP_002479667.1| exsB protein [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
 gi|219868654|gb|ACL48989.1| exsB protein [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
          Length = 258

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 119/228 (52%), Positives = 170/228 (74%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           +AL++FSGGQDS+TCL+WALDRF RV TL FDYGQR+ VEL CR  +R+K+  L P+W  
Sbjct: 18  TALVIFSGGQDSATCLAWALDRFARVRTLGFDYGQRHAVELACRQNLREKLATLNPQWAA 77

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            L  D +L + +   +++++LT    ++ +   LPNTFVPGRN+IF++ AA  AY L I 
Sbjct: 78  RLDADCLLDIGLFRQLANTALTSTSPIEDKPEGLPNTFVPGRNLIFILHAAAWAYGLDIR 137

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
           ++V+GVC++D SGYPDCR D+I+A++ A+N+GM+++  +HTPLMW  K + W LA+ +GG
Sbjct: 138 HMVLGVCQSDSSGYPDCRDDSIKAMQVALNVGMDANFVLHTPLMWRSKKDAWTLAEVLGG 197

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            +LV+LI+EESHTCY G+R +R+ WGYGC  CPAC LR  G+ E+  +
Sbjct: 198 ANLVDLIVEESHTCYEGQRGQRHPWGYGCGQCPACRLRAAGYTEYLTE 245


>gi|307294877|ref|ZP_07574719.1| exsB protein [Sphingobium chlorophenolicum L-1]
 gi|306879351|gb|EFN10569.1| exsB protein [Sphingobium chlorophenolicum L-1]
          Length = 237

 Score =  190 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 130/229 (56%), Positives = 174/229 (75%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +     SAL++FSGGQDS+TCL+WAL+RFDRVET+ F YGQR+++EL  R  +R+ I + 
Sbjct: 1   MSNADASALVVFSGGQDSATCLAWALNRFDRVETIGFRYGQRHEIELAVRNPLREGIADA 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
            P W   LG D I+ LA+LG++S S+LT ++ + ++D+ LP TFVPGRN+IFL FAA  A
Sbjct: 61  FPNWAPRLGPDRIIDLAVLGEVSESALTSDIDIGMRDDGLPTTFVPGRNLIFLTFAAITA 120

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           Y+ G+ ++V GVCETDYSGYPDCR DTI+A++ A+NLGM SH+ + TPLMW+ K  TW+L
Sbjct: 121 YQRGLKHVVTGVCETDYSGYPDCRDDTIKALQAALNLGMGSHLVLDTPLMWIDKAATWRL 180

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
           A ++GG  LV++I E SH+CYLG R  R++WGYGC SCPAC LR  GW 
Sbjct: 181 AAELGGSALVDIIREHSHSCYLGDRAHRHDWGYGCGSCPACDLRANGWR 229


>gi|162148727|ref|YP_001603188.1| succinoglycan protein [Gluconacetobacter diazotrophicus PAl 5]
 gi|189038916|sp|A9HRF6|QUEC_GLUDA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|161787304|emb|CAP56898.1| Succinoglycan protein [Gluconacetobacter diazotrophicus PAl 5]
          Length = 245

 Score =  190 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 132/224 (58%), Positives = 169/224 (75%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           A++LFSGGQDS+TCL+WAL RF RVET+ FDYGQR+ VEL CR  +R  +  L P W   
Sbjct: 15  AIVLFSGGQDSATCLAWALSRFGRVETVGFDYGQRHAVELACRARLRDGMAALDPDWATR 74

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG+DH L L  LG +S ++LT++ A+ + +N LP+TFVPGRN+IFL FAA LA R G  +
Sbjct: 75  LGQDHTLALDALGTVSDTALTRDAAITMNENGLPSTFVPGRNLIFLTFAAALAARRGARH 134

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G+CETDYSGYPDCR DTI+A++ A+NLGM S   +HTPLMW+ K ETW++A+ +GG 
Sbjct: 135 IVGGMCETDYSGYPDCRDDTIKAMQVALNLGMASRYVLHTPLMWIDKAETWRMAEGLGGA 194

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           DLV LI  ESH+CYLG RD  + WG+GC +CPAC LR+ GW  +
Sbjct: 195 DLVELINRESHSCYLGVRDVMHPWGHGCGTCPACMLRRAGWERY 238


>gi|261419197|ref|YP_003252879.1| exsB protein [Geobacillus sp. Y412MC61]
 gi|261375654|gb|ACX78397.1| exsB protein [Geobacillus sp. Y412MC61]
          Length = 224

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 95/236 (40%), Positives = 146/236 (61%), Gaps = 21/236 (8%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           ++K     A+++FSGGQDS+TCL WA ++F  VE ++FDYGQR++ E++    +  ++  
Sbjct: 1   MMKMNEEKAVVVFSGGQDSTTCLFWAKEQFGEVEAVTFDYGQRHRREIDVAQAIADELG- 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                        +L L++LG ++ ++LT +++A++ ++  LP TFV GRN++FL FAA 
Sbjct: 60  ---------VRHTVLDLSLLGQLAPNALTRRDIAIEQKEGELPTTFVDGRNLLFLSFAAV 110

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            A + G  +IV GVCETD+SGYPDCR   I+++   +NL M+    +HTPLMWL K ETW
Sbjct: 111 FAKQRGARHIVTGVCETDFSGYPDCRDVFIKSLNVTLNLAMDYEFVIHTPLMWLTKAETW 170

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           KLA ++G    +  I  ++ TCY G          GC  CPAC LR++G  E+  +
Sbjct: 171 KLADELGA---LEFIRTKTLTCYNGI------IADGCGECPACVLRKRGLDEYLRE 217


>gi|319942229|ref|ZP_08016545.1| queuosine biosynthesis protein queC [Sutterella wadsworthensis
           3_1_45B]
 gi|319804282|gb|EFW01174.1| queuosine biosynthesis protein queC [Sutterella wadsworthensis
           3_1_45B]
          Length = 252

 Score =  189 bits (479), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 118/224 (52%), Positives = 165/224 (73%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS+TCL WAL+RF RVET+  DYGQR++ ELECR+ VR+K+ +L P+W + 
Sbjct: 16  ALVLFSGGQDSTTCLGWALERFGRVETIGVDYGQRHQAELECRVRVREKMAQLKPQWGER 75

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG+DH+L L +LG+I+  +LT    +  + + LPNTFVPGRN++F   AA+LAYR G+  
Sbjct: 76  LGDDHLLKLPVLGEIADCALTDERRIAFEASGLPNTFVPGRNLLFFTLAASLAYRRGLRV 135

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G+CETDYSGYPDCR +T+++++  ++LG++    + TPLM L K ETW LA+ +GG 
Sbjct: 136 LVGGMCETDYSGYPDCRDNTLKSLQVTLDLGLDMPFIIETPLMRLSKAETWALAEHVGGD 195

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
             V L+  ++HTCY+G    R+ WGYGC  CPAC LR +GW  +
Sbjct: 196 PFVELVRNDTHTCYMGDHQHRHVWGYGCGECPACKLRAQGWASW 239


>gi|114569268|ref|YP_755948.1| exsB protein [Maricaulis maris MCS10]
 gi|122316597|sp|Q0ARS7|QUEC_MARMM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|114339730|gb|ABI65010.1| preQ(0) biosynthesis protein QueC [Maricaulis maris MCS10]
          Length = 243

 Score =  189 bits (479), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 125/230 (54%), Positives = 162/230 (70%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               +AL+LFSGGQDS+TCL+WAL R+ RVET+ FDYGQR+ VE+  R  VR  +    P
Sbjct: 9   HANRTALVLFSGGQDSATCLAWALQRYARVETVGFDYGQRHHVEMTARERVRSGLAASFP 68

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            W D LGED ++ LA  G I+ S+LT + A+++Q N LP+TFVPGRN++FL  A+ LAYR
Sbjct: 69  HWGDRLGEDFVIDLAGYGAIADSALTADRAIEMQANGLPSTFVPGRNLVFLTVASALAYR 128

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G   +V G+CETD+SGYPDCR +TI A++TA+ LG+E  V + TPLM L K  TW LA 
Sbjct: 129 RGHGVLVGGMCETDFSGYPDCRRNTIDAMQTALGLGLEMAVEIATPLMHLDKAATWALAH 188

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            +GG  L+ LI E+SHTCY G+R KR+ WGYGC  CPAC LR  G   ++
Sbjct: 189 QLGGDALIGLIEEDSHTCYRGERGKRHAWGYGCGDCPACELRANGHAAWQ 238


>gi|209545506|ref|YP_002277735.1| exsB protein [Gluconacetobacter diazotrophicus PAl 5]
 gi|209533183|gb|ACI53120.1| exsB protein [Gluconacetobacter diazotrophicus PAl 5]
          Length = 245

 Score =  188 bits (478), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 132/224 (58%), Positives = 169/224 (75%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           A++LFSGGQDS+TCL+WAL RF RVET+ FDYGQR+ VEL CR  +R  +  L P W   
Sbjct: 15  AIVLFSGGQDSATCLAWALSRFGRVETVGFDYGQRHAVELACRARLRDGMAALDPDWATR 74

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG+DH L L  LG +S ++LT++ A+ + +N LP+TFVPGRN+IFL FAA LA R G  +
Sbjct: 75  LGQDHTLALDALGAVSDTALTRDAAITMNENGLPSTFVPGRNLIFLTFAAALAARRGARH 134

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G+CETDYSGYPDCR DTI+A++ A+NLGM S   +HTPLMW+ K ETW++A+ +GG 
Sbjct: 135 IVGGMCETDYSGYPDCRDDTIKAMQVALNLGMASRYVLHTPLMWIDKAETWRMAEGVGGA 194

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           DLV LI  ESH+CYLG RD  + WG+GC +CPAC LR+ GW  +
Sbjct: 195 DLVELINRESHSCYLGVRDVMHPWGHGCGTCPACMLRRAGWERY 238


>gi|85715521|ref|ZP_01046502.1| ExsB [Nitrobacter sp. Nb-311A]
 gi|85697716|gb|EAQ35592.1| ExsB [Nitrobacter sp. Nb-311A]
          Length = 250

 Score =  188 bits (478), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 136/227 (59%), Positives = 172/227 (75%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           + +AL+LFSGGQDS+TCL+WAL RF RVETL FDYGQR+ +EL CR  +   +  L P W
Sbjct: 19  SRTALVLFSGGQDSATCLAWALQRFARVETLGFDYGQRHAIELNCRDKLLAGMASLRPDW 78

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              LGE H L +  L +IS ++LT+NVA+++ +  LPNTFVPGRN++FL FAA LAYR G
Sbjct: 79  AKKLGETHTLAVPTLAEISDTALTRNVAIEMGEGGLPNTFVPGRNLVFLTFAAALAYRRG 138

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +T+IV G+CETDYSGYPDCR +TIRA+ TA+NLGM +   +HTPLM L K  TW LA ++
Sbjct: 139 VTDIVGGMCETDYSGYPDCRDETIRALRTALNLGMATRFELHTPLMRLDKGATWSLAHEL 198

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           GG  LV+LI E SHTCYLG+R  R+ WGYGC +CPAC LR KGW ++
Sbjct: 199 GGAGLVDLIREHSHTCYLGERGARHAWGYGCATCPACELRAKGWRKY 245


>gi|188580425|ref|YP_001923870.1| exsB protein [Methylobacterium populi BJ001]
 gi|179343923|gb|ACB79335.1| exsB protein [Methylobacterium populi BJ001]
          Length = 239

 Score =  188 bits (476), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 137/229 (59%), Positives = 177/229 (77%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           L+LFSGGQDS+TCL+WALDRF  VETL FDYGQR++VEL+ R  +R+ +  L P W+  L
Sbjct: 11  LVLFSGGQDSATCLAWALDRFPHVETLGFDYGQRHRVELDRREALRRGVTALDPGWRRRL 70

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           GEDH L LA LG IS ++LT++ A+    + LPNTFVPGRN+ FL FAA LAYR G+ +I
Sbjct: 71  GEDHTLSLAALGAISDTALTRDSAIAFARDGLPNTFVPGRNLAFLTFAAALAYRRGLRHI 130

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V G+CETD+SGYPDCR DTI+A++ A+NLGME    +HTPLMW+ K +TW LA+ +GG+ 
Sbjct: 131 VGGMCETDFSGYPDCRDDTIKALQVALNLGMERRFVLHTPLMWIDKAQTWALAEALGGRP 190

Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
           LV+LI+EESHTCYLG+R +R++WGYGC +CPAC LR KG+  +     D
Sbjct: 191 LVDLIVEESHTCYLGERGERHDWGYGCGTCPACDLRAKGFARYLAARAD 239


>gi|297530834|ref|YP_003672109.1| exsB protein [Geobacillus sp. C56-T3]
 gi|297254086|gb|ADI27532.1| exsB protein [Geobacillus sp. C56-T3]
          Length = 223

 Score =  188 bits (476), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 95/232 (40%), Positives = 143/232 (61%), Gaps = 21/232 (9%)

Query: 5   IKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +K     A+++FSGGQDS+TCL WA  +F  VE ++FDYGQR++ E++    +  ++   
Sbjct: 1   MKMNEEKAVVVFSGGQDSTTCLFWAKKQFGEVEAVTFDYGQRHRREIDVAQAIADELG-- 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                       +L L++LG ++ ++LT +++A++ ++  LP TFV GRN++FL FAA  
Sbjct: 59  --------VRHTVLDLSLLGQLAPNALTRRDIAIEQKEGELPTTFVDGRNLLFLSFAAVF 110

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A + G  +IV GVCETD+SGYPDCR   I+++   +NL M+    +HTPLMWL K ETWK
Sbjct: 111 AKQRGARHIVTGVCETDFSGYPDCRDVFIKSLNVTLNLAMDYEFVIHTPLMWLTKAETWK 170

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           LA ++G    +  I  ++ TCY G          GC  CPAC LR++G  E+
Sbjct: 171 LADELGA---LEFIRTKTLTCYNGI------IADGCGECPACVLRKRGLDEY 213


>gi|319766013|ref|YP_004131514.1| exsB protein [Geobacillus sp. Y412MC52]
 gi|317110879|gb|ADU93371.1| exsB protein [Geobacillus sp. Y412MC52]
          Length = 223

 Score =  187 bits (475), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 95/235 (40%), Positives = 145/235 (61%), Gaps = 21/235 (8%)

Query: 5   IKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +K     A+++FSGGQDS+TCL WA ++F  VE ++FDYGQR++ E++    +  ++   
Sbjct: 1   MKMNEEKAVVVFSGGQDSTTCLFWAKEQFGEVEAVTFDYGQRHRREIDVAQAIADELG-- 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                       +L L++LG ++ ++LT +++A++ ++  LP TFV GRN++FL FAA  
Sbjct: 59  --------VRHTVLDLSLLGQLAPNALTRRDIAIEQKEGELPTTFVDGRNLLFLSFAAVF 110

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A + G  +IV GVCETD+SGYPDCR   I+++   +NL M+    +HTPLMWL K ETWK
Sbjct: 111 AKQRGARHIVTGVCETDFSGYPDCRDVFIKSLNVTLNLAMDYEFVIHTPLMWLTKAETWK 170

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           LA ++G    +  I  ++ TCY G          GC  CPAC LR++G  E+  +
Sbjct: 171 LADELGA---LEFIRTKTLTCYNGI------IADGCGECPACVLRKRGLDEYLRE 216


>gi|163850656|ref|YP_001638699.1| exsB protein [Methylobacterium extorquens PA1]
 gi|259551542|sp|A9W222|QUEC_METEP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|163662261|gb|ABY29628.1| exsB protein [Methylobacterium extorquens PA1]
          Length = 243

 Score =  187 bits (475), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 137/224 (61%), Positives = 175/224 (78%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS+TCL+WALDRF  VETL FDYGQR++VEL+ R  +R+ +  L P W   
Sbjct: 14  ALVLFSGGQDSATCLAWALDRFPHVETLGFDYGQRHRVELDRRAALRQGLTALDPAWGRR 73

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG DH L LA LG+IS ++LT++ A+    + LPNTFVPGRN+ FL FAA LAYR G+ +
Sbjct: 74  LGPDHTLALAALGEISDTALTRDSAIAFARDGLPNTFVPGRNLAFLTFAAALAYRRGLRH 133

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G+CETDYSGYPDCR DTI+A++ A+NLGME    +HTPLMW+ K +TW LA+ +GG+
Sbjct: 134 IVGGMCETDYSGYPDCRDDTIKALQVALNLGMERRFVLHTPLMWIDKAQTWALAETLGGR 193

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            LV+L++EESHTCYLG+R  R+EWGYGC +CPAC LR KG+  +
Sbjct: 194 ALVDLVVEESHTCYLGERGARHEWGYGCGTCPACDLRAKGFSRY 237


>gi|46581063|ref|YP_011871.1| exsB protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|120601646|ref|YP_966046.1| exsB protein [Desulfovibrio vulgaris DP4]
 gi|81404359|sp|Q728E4|QUEC_DESVH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|167016424|sp|A1VB03|QUEC_DESVV RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|46450484|gb|AAS97131.1| exsB protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|120561875|gb|ABM27619.1| preQ(0) biosynthesis protein QueC [Desulfovibrio vulgaris DP4]
 gi|311234740|gb|ADP87594.1| exsB protein [Desulfovibrio vulgaris RCH1]
          Length = 242

 Score =  187 bits (475), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 125/231 (54%), Positives = 169/231 (73%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +     +AL++FSGGQDS+TCL WAL+RF  V T+ F YGQR+ VE++CR  V   I ++
Sbjct: 1   MPSCDGNALVIFSGGQDSTTCLGWALNRFRTVATIGFHYGQRHDVEMQCRQDVLAAIGDV 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
            P WK  LG D ++ + +  ++  ++LT +VA+++  N LP+TFVPGRN++FL  AA  A
Sbjct: 61  RPGWKAHLGTDTVVEMGLFRELGETALTHDVAIEMGRNGLPSTFVPGRNLMFLTAAAACA 120

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           YR GI ++V+GVCETD+SGYPDCR D ++A++ A+NLGMES   VHTPLMWL K +TW +
Sbjct: 121 YRQGIRHLVLGVCETDFSGYPDCRDDAMKAMQVALNLGMESRFVVHTPLMWLTKAQTWDM 180

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           A+D GGQD V L+LE SHTCY G RD R+ WGYGC +CPAC LR+ GW  +
Sbjct: 181 ARDEGGQDFVELVLERSHTCYKGVRDVRHPWGYGCGTCPACELRRAGWDAY 231


>gi|218886226|ref|YP_002435547.1| exsB protein [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218757180|gb|ACL08079.1| exsB protein [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 239

 Score =  187 bits (474), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 122/232 (52%), Positives = 167/232 (71%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +    +AL++ SGGQDS+TCL WAL+RF RV T+ F YGQR+ VE++CRL +  ++  L 
Sbjct: 1   MHSKETALVVLSGGQDSATCLGWALERFGRVSTIGFHYGQRHTVEMDCRLRLMDEVRRLS 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             W + LG+D  + LA+  ++  ++LT +VA+++  N LP TFVPGRN++FL  AA  AY
Sbjct: 61  AGWNERLGDDTTVELALFRELGSTALTHDVAIEMGRNGLPTTFVPGRNLVFLTAAAAHAY 120

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           R GI +I+IGVCETDYSGYPDCR DTI+A++ A+NLGME+   +HTPLMWL K  TW+LA
Sbjct: 121 RQGIRHIIIGVCETDYSGYPDCRDDTIKAMQVALNLGMETRFVLHTPLMWLTKGATWELA 180

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           + +GG   V ++LE +HTCY G R  R+ WGYGC  CPAC LR+ GW ++  
Sbjct: 181 RQVGGDAFVEVVLEHTHTCYKGVRATRHPWGYGCGDCPACDLRRHGWADYLR 232


>gi|56419510|ref|YP_146828.1| aluminum resistance protein [Geobacillus kaustophilus HTA426]
 gi|56379352|dbj|BAD75260.1| aluminum resistance protein [Geobacillus kaustophilus HTA426]
          Length = 224

 Score =  187 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 95/236 (40%), Positives = 144/236 (61%), Gaps = 21/236 (8%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           ++K     A+++FSGGQDS+TCL WA  +F  VE ++FDYGQR++ E++    +  ++  
Sbjct: 1   MMKMNEEKAVVVFSGGQDSTTCLFWAKKQFGEVEAVTFDYGQRHRREIDVAQAIADELG- 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                        +L L++LG ++ ++LT +++A++ +   LP TFV GRN++FL FAA 
Sbjct: 60  ---------VRHTVLDLSLLGQLAPNALTRRDIAIEQKKGELPTTFVDGRNLLFLSFAAV 110

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            A + G  +IV GVCETD+SGYPDCR   I+++   +NL M+    +HTPLMWL K ETW
Sbjct: 111 FAKQRGARHIVTGVCETDFSGYPDCRDVFIKSLNVTLNLAMDYEFVIHTPLMWLTKAETW 170

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           KLA ++G    +  I  ++ TCY G          GC  CPAC LR++G  E+  +
Sbjct: 171 KLADELGA---LEFIRTKTLTCYNGI------IADGCGECPACALRKRGLDEYLRE 217


>gi|124265463|ref|YP_001019467.1| hypothetical protein Mpe_A0270 [Methylibium petroleiphilum PM1]
 gi|189038926|sp|A2SCE3|QUEC_METPP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|124258238|gb|ABM93232.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
          Length = 235

 Score =  187 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 127/231 (54%), Positives = 170/231 (73%), Gaps = 1/231 (0%)

Query: 5   IKKAPS-ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +   P  AL+LFSGGQDS+ CL+WAL+    VET+ FDYGQR+ VELECR+ VR+ I   
Sbjct: 1   MSLDPRGALVLFSGGQDSTACLAWALEHHAHVETIGFDYGQRHVVELECRVQVREAIARS 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
            P W   L  DH+L L +LG IS ++LT   A+++Q N LP+TFVPGRN++FL FAAT+A
Sbjct: 61  FPLWAGRLANDHVLDLGLLGQISDTALTSARAIEMQANGLPSTFVPGRNLLFLGFAATVA 120

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           YR  ++ +V G+CETDYSGYPDCR +T++A++ A++LGM + +T+ TPLMWL K  TW L
Sbjct: 121 YRRNLSVLVGGMCETDYSGYPDCRDNTLKALQVALSLGMATPMTIETPLMWLDKARTWAL 180

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              +GG+ L  LILE +H+CYLG R  R+ WGYGCN+CPAC LR+KG+  +
Sbjct: 181 TDRLGGRALNELILEHTHSCYLGDRSVRHAWGYGCNACPACELRRKGYEAW 231


>gi|89899546|ref|YP_522017.1| ExsB [Rhodoferax ferrireducens T118]
 gi|110816253|sp|Q220R7|QUEC_RHOFD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|89344283|gb|ABD68486.1| ExsB [Rhodoferax ferrireducens T118]
          Length = 243

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 127/236 (53%), Positives = 172/236 (72%), Gaps = 8/236 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +AL+LFSGGQDS+TCL+ AL ++ RVET++FDY QR+ VEL+ RL V  +I    P+
Sbjct: 1   MHTTALVLFSGGQDSTTCLALALSKYQRVETIAFDYRQRHLVELDARLIVLNEIRARFPQ 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           W   LGEDH+L LA+LG++S +SLT++ A K++ + LPNTFVPGRN++FL  AA +AYR 
Sbjct: 61  WASKLGEDHLLDLAVLGEVSDTSLTRDTAFKMEQSGLPNTFVPGRNLLFLTLAAAVAYRR 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +  +V GVCETD+SGYPDCR DTI+A++ A++LGM+    + TPLMW+ K  TW LA +
Sbjct: 121 DLQVMVTGVCETDFSGYPDCRDDTIKAMQLALSLGMDKRFLIETPLMWIDKAATWALAYE 180

Query: 187 I--------GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           +        GGQ LV+LI+E +HTCYLG R  R+ WGYGC SCPAC LR +G+  +
Sbjct: 181 LGEKSGTPGGGQALVDLIIEHTHTCYLGDRQHRHAWGYGCGSCPACELRARGYERY 236


>gi|138894533|ref|YP_001124986.1| aluminum resistance protein [Geobacillus thermodenitrificans
           NG80-2]
 gi|134266046|gb|ABO66241.1| Aluminum resistance protein [Geobacillus thermodenitrificans
           NG80-2]
          Length = 223

 Score =  186 bits (471), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 95/235 (40%), Positives = 145/235 (61%), Gaps = 21/235 (8%)

Query: 5   IKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +K     A+++FSGGQDS+TCL WA  +F  VE ++FDYGQR++ E+E    +  ++   
Sbjct: 1   MKMNEEKAVVVFSGGQDSTTCLFWAKKQFAEVEAVTFDYGQRHRREIEVAASIADELG-- 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                       +L +++LG ++ ++LT+  +A++ ++  LP TFV GRN++FL FAA L
Sbjct: 59  --------VRHTVLDMSLLGQLAPNALTRGEIAIEQKEGELPTTFVDGRNLLFLSFAAVL 110

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A + G  +IV GVCETD+SGYPDCR   I+++   +NL M+    +HTPLMWL K ETWK
Sbjct: 111 AKQRGARHIVTGVCETDFSGYPDCRDIFIKSLNVTLNLAMDYPFVIHTPLMWLTKAETWK 170

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           LA ++G    +  +  ++ TCY G          GC  CPAC LR++G  E+ ++
Sbjct: 171 LADELGA---LEFVRTKTLTCYNG------VIADGCGECPACVLRKRGLEEYLQE 216


>gi|95929965|ref|ZP_01312705.1| ExsB [Desulfuromonas acetoxidans DSM 684]
 gi|95133934|gb|EAT15593.1| ExsB [Desulfuromonas acetoxidans DSM 684]
          Length = 227

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 75/236 (31%), Positives = 114/236 (48%), Gaps = 24/236 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +  A++L+SGG DS+TCL+WA  +      LSF YGQR+ +ELE       ++      
Sbjct: 1   MSKKAIVLYSGGLDSTTCLAWAKAQGMTPYALSFRYGQRHSIELEKAESFAPQMGAEQHL 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D       + L  +G  + ++  +    +  D  +P T+VP RN IFL +    A  L
Sbjct: 61  IVD-------IDLRKIGGSALTADIEVPKDRQIDEAIPVTYVPARNTIFLSYGLAWAEAL 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLKKYET 180
           G  +IVIGV   DYSGYPDCR + I A +   NL  ++ V       +HTPL+ L K + 
Sbjct: 114 GAFDIVIGVNALDYSGYPDCRPEFIEAYQNMANLATKAAVEGSGQYQIHTPLLHLSKADI 173

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            ++  D+G      +    +H+CY          G  C  C +C LR  G+ +  +
Sbjct: 174 IRMGTDLG------VDYALTHSCYDP-----APDGRACGRCDSCVLRLNGFAQAGQ 218


>gi|196247862|ref|ZP_03146564.1| exsB protein [Geobacillus sp. G11MC16]
 gi|196212646|gb|EDY07403.1| exsB protein [Geobacillus sp. G11MC16]
          Length = 223

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 94/235 (40%), Positives = 145/235 (61%), Gaps = 21/235 (8%)

Query: 5   IKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +K     A+++FSGGQDS+TCL WA  +F  VE ++FDYGQR++ E+E    +  ++   
Sbjct: 1   MKMNEEKAVVVFSGGQDSTTCLFWAKKQFAEVEAVTFDYGQRHRREIEVAASIADELG-- 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                       +L +++LG ++ ++LT+  +A++ ++  LP TFV GRN++FL FAA L
Sbjct: 59  --------VRHTVLDMSLLGQLAPNALTRGEIAIEQKEGELPTTFVDGRNLLFLSFAAVL 110

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A + G  +IV GVCETD+SGYPDCR   I+++   +NL M+    ++TPLMWL K ETWK
Sbjct: 111 AKQRGARHIVTGVCETDFSGYPDCRDIFIKSLNVTLNLAMDYPFVIYTPLMWLTKAETWK 170

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           LA ++G    +  +  ++ TCY G          GC  CPAC LR++G  E+ ++
Sbjct: 171 LADELGA---LEFVRTKTLTCYNG------VIADGCGECPACVLRKRGLEEYLQE 216


>gi|121998595|ref|YP_001003382.1| exsB protein [Halorhodospira halophila SL1]
 gi|189038918|sp|A1WY18|QUEC_HALHL RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|121590000|gb|ABM62580.1| preQ(0) biosynthesis protein QueC [Halorhodospira halophila SL1]
          Length = 247

 Score =  185 bits (469), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 121/229 (52%), Positives = 162/229 (70%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +  SAL+LFSGGQDS+ CL+WAL+ F RVET+ F YGQR+ VEL  R  V   +  L P 
Sbjct: 13  EQESALVLFSGGQDSTACLAWALEYFSRVETVGFAYGQRHDVELSAREEVLDGLRALRPD 72

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           W   LG D +L   +LG+IS ++LT++  +      LP TFVPGRN++F   AA +A+R 
Sbjct: 73  WAARLGSDRVLDAGVLGEISDTALTQDAEIAYDARGLPTTFVPGRNLLFFTLAAAVAHRR 132

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI ++V GVCETD+SGYPDCR DT+++++  +NLGM   + +HTPLMWL K +TW LA+ 
Sbjct: 133 GIRHLVAGVCETDFSGYPDCRDDTVKSLQVTLNLGMAERLVLHTPLMWLDKAQTWMLAEQ 192

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           +GG  LV+L +E SHTCY G R++R+EWGYGC  CPAC LR +GW  F+
Sbjct: 193 LGGSALVDLTVEASHTCYYGMREQRHEWGYGCGECPACRLRAEGWHRFR 241


>gi|88705615|ref|ZP_01103325.1| secreted protein [Congregibacter litoralis KT71]
 gi|88700128|gb|EAQ97237.1| secreted protein [Congregibacter litoralis KT71]
          Length = 226

 Score =  185 bits (469), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 76/243 (31%), Positives = 113/243 (46%), Gaps = 28/243 (11%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +  +  A++L SGG DS+T L+ A ++     +LSFDYGQR++ EL     V K + ++ 
Sbjct: 1   MNSSKKAVVLVSGGLDSTTVLALAREQGYECYSLSFDYGQRHRAELFAAERVSKTLGDVE 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            K          L L  +G  + +     V  +  +      +VP RN +FL  A   A 
Sbjct: 61  HKVV-------RLNLDSIGGSALTDENIAVPEEASEGIPVT-YVPARNTVFLSIALGWAE 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYE 179
            LG  +I IGV   DYSGYPDCR   I A +   N+  +  V      +HTPLM L K +
Sbjct: 113 VLGAQDIFIGVNAVDYSGYPDCRPAFIDAFQQLANVATQVGVEGGRYEIHTPLMDLGKDD 172

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK---- 235
             KL   +G      +   ++ +CY    D     G  C  C AC LR++G++       
Sbjct: 173 IVKLGARLG------VDYSQTVSCYQATDD-----GLACGVCDACRLRREGFVNAGLEDV 221

Query: 236 EKY 238
            +Y
Sbjct: 222 TRY 224


>gi|295401299|ref|ZP_06811271.1| exsB protein [Geobacillus thermoglucosidasius C56-YS93]
 gi|312111881|ref|YP_003990197.1| exsB protein [Geobacillus sp. Y4.1MC1]
 gi|294976706|gb|EFG52312.1| exsB protein [Geobacillus thermoglucosidasius C56-YS93]
 gi|311216982|gb|ADP75586.1| exsB protein [Geobacillus sp. Y4.1MC1]
          Length = 222

 Score =  185 bits (469), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 97/231 (41%), Positives = 148/231 (64%), Gaps = 20/231 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K   A+++FSGGQDS+TCL WAL +FD VE ++FDYGQR+++E+E    + K++    
Sbjct: 1   MGKKEKAVVVFSGGQDSTTCLFWALKQFDEVEAVTFDYGQRHRLEIEVAASIAKELG--- 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      +L +++L  ++ ++LT+ ++A++ +D  LP+TFV GRN++FL FAA LA
Sbjct: 58  -------ISHTVLDMSLLNQLAPNALTRSDIAIEQKDGQLPSTFVDGRNLLFLSFAAVLA 110

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            + G  ++V GVCETD+SGYPDCR   I+++   +NL M+    +HTPLMWL K +TWKL
Sbjct: 111 KQKGARHLVTGVCETDFSGYPDCRDIFIKSLNVTLNLAMDYQFVIHTPLMWLTKAQTWKL 170

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           A ++G  + V     ++ TCY G          GC  CPAC LR++G  E+
Sbjct: 171 ADELGAFEFVR---TKTLTCYNGI------IADGCGECPACVLRRRGLEEY 212


>gi|154253587|ref|YP_001414411.1| exsB protein [Parvibaculum lavamentivorans DS-1]
 gi|189038931|sp|A7HXX1|QUEC_PARL1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|154157537|gb|ABS64754.1| exsB protein [Parvibaculum lavamentivorans DS-1]
          Length = 236

 Score =  185 bits (468), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 122/228 (53%), Positives = 162/228 (71%), Gaps = 1/228 (0%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   AL+LFSGGQDS+ CL+  L R+D VET+ FDYGQ + VEL CR  +R  +    P 
Sbjct: 5   EKTKALVLFSGGQDSTVCLASVLARYDEVETVGFDYGQAHAVELGCRAKLRDAL-TRFPG 63

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           W   LG DH++ L  LG IS ++LT++V +++ +N LP TFVPGRN++F  +AA L YR 
Sbjct: 64  WGAKLGPDHMIALPELGRISETALTRDVEIEMGENGLPTTFVPGRNLLFFTYAAALGYRR 123

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G + IV G+CETDYSGYPDCR DTI A+E AI LGM+   T+ TPLM + K  TW LA +
Sbjct: 124 GASVIVGGMCETDYSGYPDCRADTIAALERAICLGMDRAFTLETPLMRIDKAATWALAHE 183

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           +GG  LV+LI+EE+H+CY G R KR++WGYGC +CPAC LR +G+  +
Sbjct: 184 LGGDALVDLIIEETHSCYRGDRSKRHDWGYGCGTCPACELRARGYTAY 231


>gi|319762211|ref|YP_004126148.1| exsb protein [Alicycliphilus denitrificans BC]
 gi|317116772|gb|ADU99260.1| exsB protein [Alicycliphilus denitrificans BC]
          Length = 239

 Score =  185 bits (468), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 119/230 (51%), Positives = 166/230 (72%), Gaps = 2/230 (0%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              AL+L SGGQDS+TCL+WAL R+  VET+ FDYGQR++ EL+CR  +R  +  +   W
Sbjct: 6   RRRALVLLSGGQDSATCLAWALARYAHVETIGFDYGQRHRAELDCRQRLRAGLQAMP--W 63

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              LG DH+L + +L  +  S++T+ VA+ +Q + LPNTFVPGRN++F   AA LAYR G
Sbjct: 64  SGRLGPDHLLTVDVLAQLGGSAMTEEVAIAMQQDGLPNTFVPGRNLLFFTLAAALAYRRG 123

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +V G+ ETDYSGYPDCR +T++A++ A++LG++  +T+ TPLMW+ K  TW LA  +
Sbjct: 124 LQVLVGGMSETDYSGYPDCRDNTLKALQVALSLGLDRPLTLETPLMWIDKAGTWALAHQL 183

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           GG  LV LI  +SHTCYLG+RD+ ++WGYGC  CPAC LR +GW ++ EK
Sbjct: 184 GGDALVELIRRDSHTCYLGQRDRLHDWGYGCGRCPACELRAQGWAQWAEK 233


>gi|228957712|ref|ZP_04119456.1| hypothetical protein bthur0005_12280 [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228801955|gb|EEM48828.1| hypothetical protein bthur0005_12280 [Bacillus thuringiensis
           serovar pakistani str. T13001]
          Length = 223

 Score =  185 bits (468), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 94/240 (39%), Positives = 153/240 (63%), Gaps = 22/240 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+++  K   A+++FSGGQDS+TCL WA+++F  VE ++F+Y QR+K+E++C   + K++
Sbjct: 1   MSEM--KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAEIAKEL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                       +  +L +++L  ++ ++LT  ++ +  ++  LP+TFV GRN++FL FA
Sbjct: 59  G----------IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFA 108

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           A LA ++G  +IV GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K E
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAE 168

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           TWKLA ++G  + V    E++ TCY G        G GC  CPAC LR+ G   + ++ +
Sbjct: 169 TWKLADELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 219


>gi|121611883|ref|YP_999690.1| exsB protein [Verminephrobacter eiseniae EF01-2]
 gi|189029332|sp|A1WSR5|QUEC_VEREI RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|121556523|gb|ABM60672.1| exsB protein [Verminephrobacter eiseniae EF01-2]
          Length = 237

 Score =  184 bits (467), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 117/227 (51%), Positives = 165/227 (72%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS+TCL+WAL +F  VET+ FDYGQR+ VEL+ R  V   I     +W++ 
Sbjct: 6   ALVLFSGGQDSTTCLAWALTQFAHVETIGFDYGQRHHVELQARQTVLAAIRSRFAQWRER 65

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG DH++ L++LG IS ++LT++ A+++    LPNTFVPGRN++F   AA + YR G+  
Sbjct: 66  LGADHMIDLSVLGRISDTALTRDSAIQLSAAGLPNTFVPGRNLLFFNLAAAVGYRRGLHT 125

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G+CETD+SGYPDCR D+++A++ A++LG+    T  TPLMWL K  TW+LA+ +GGQ
Sbjct: 126 LVGGMCETDFSGYPDCRDDSLKALQVAVSLGLGQRFTFETPLMWLDKAATWELARSLGGQ 185

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            LV LI+ +SHTCY G R   + WG+GC +CPAC LRQ G+  ++ +
Sbjct: 186 ALVELIVRDSHTCYHGVRGVLHAWGHGCGTCPACVLRQTGYDRWQAR 232


>gi|114328780|ref|YP_745938.1| queuosine biosynthesis protein QueC [Granulibacter bethesdensis
           CGDNIH1]
 gi|122326267|sp|Q0BQ87|QUEC_GRABC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|114316954|gb|ABI63014.1| queuosine biosynthesis protein QueC [Granulibacter bethesdensis
           CGDNIH1]
          Length = 252

 Score =  184 bits (467), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 127/237 (53%), Positives = 165/237 (69%), Gaps = 5/237 (2%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + +   AL+LFSGGQDS+TCL+WAL+RF  VET+ F YGQR+ VE+ECR  VR+ +  + 
Sbjct: 12  LPRHDHALVLFSGGQDSTTCLAWALERFAHVETIGFTYGQRHSVEMECRGRVRQVLAHMS 71

Query: 65  ----PKWKDSLGEDHILPLAI-LGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                 W   LG+DH+L L   L  +  S+LT    ++I    LP +FVPGRN+IFL +A
Sbjct: 72  GRSGADWGSRLGDDHVLDLGNALHHVGQSALTGRSPIEIGQGGLPTSFVPGRNLIFLTYA 131

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           A L +R G+  +V G+CETDYSGYPDCR DTI+A++ A+N GME+H  + TPLMWL K E
Sbjct: 132 AALGWRRGLRRMVGGMCETDYSGYPDCRDDTIKAMQLALNTGMEAHFVLETPLMWLTKAE 191

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           TW LA  +GG  LV LI EE+HTCYLG R +R+ WGYGC  CPAC LR +GW E++ 
Sbjct: 192 TWALADSLGGPALVALIEEETHTCYLGDRSQRHPWGYGCGECPACSLRAEGWREWQT 248


>gi|240137710|ref|YP_002962181.1| putative regulator, ATP-binding [Methylobacterium extorquens AM1]
 gi|254560280|ref|YP_003067375.1| regulator, ATP-binding [Methylobacterium extorquens DM4]
 gi|240007678|gb|ACS38904.1| Putative regulator, ATP-binding [Methylobacterium extorquens AM1]
 gi|254267558|emb|CAX23400.1| Putative regulator, ATP-binding [Methylobacterium extorquens DM4]
          Length = 243

 Score =  184 bits (467), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 136/223 (60%), Positives = 174/223 (78%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           L+LFSGGQDS+TCL+WALDRF  VETL FDYGQR++VEL+ R  +R+ +  L P W   L
Sbjct: 15  LVLFSGGQDSATCLAWALDRFPHVETLGFDYGQRHRVELDRRAALRQGLTALDPAWGRRL 74

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G DH L LA LG+IS ++LT++ A+    + LPNTFVPGRN+ FL FAA LAYR G+ +I
Sbjct: 75  GPDHTLALAALGEISDTALTRDSAIAFARDGLPNTFVPGRNLAFLTFAAALAYRRGLRHI 134

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V G+CETDYSGYPDCR DTI+A++ A+NLGME    +HTPLMW+ K +TW LA+ +GG+ 
Sbjct: 135 VGGMCETDYSGYPDCRDDTIKALQVALNLGMERRFVLHTPLMWIDKAQTWALAETLGGRA 194

Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           LV+L++EESHTCYLG+R  R+EWGYGC +CPAC LR KG+  +
Sbjct: 195 LVDLVVEESHTCYLGERGARHEWGYGCGTCPACDLRAKGFSRY 237


>gi|189039054|sp|A4ILN7|QUEC_GEOTN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
          Length = 221

 Score =  184 bits (467), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 96/238 (40%), Positives = 146/238 (61%), Gaps = 25/238 (10%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN+       A+++FSGGQDS+TCL WA  +F  VE ++FDYGQR++ E+E    +  ++
Sbjct: 1   MNE-----EKAVVVFSGGQDSTTCLFWAKKQFAEVEAVTFDYGQRHRREIEVAASIADEL 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                          +L +++LG ++ ++LT+  +A++ ++  LP TFV GRN++FL FA
Sbjct: 56  G----------VRHTVLDMSLLGQLAPNALTRGEIAIEQKEGELPTTFVDGRNLLFLSFA 105

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           A LA + G  +IV GVCETD+SGYPDCR   I+++   +NL M+    +HTPLMWL K E
Sbjct: 106 AVLAKQRGARHIVTGVCETDFSGYPDCRDIFIKSLNVTLNLAMDYPFVIHTPLMWLTKAE 165

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           TWKLA ++G    +  +  ++ TCY G          GC  CPAC LR++G  E+ ++
Sbjct: 166 TWKLADELGA---LEFVRTKTLTCYNG------VIADGCGECPACVLRKRGLEEYLQE 214


>gi|229138126|ref|ZP_04266724.1| hypothetical protein bcere0013_12500 [Bacillus cereus BDRD-ST26]
 gi|229195636|ref|ZP_04322402.1| hypothetical protein bcere0001_12030 [Bacillus cereus m1293]
 gi|228587885|gb|EEK45937.1| hypothetical protein bcere0001_12030 [Bacillus cereus m1293]
 gi|228645471|gb|EEL01705.1| hypothetical protein bcere0013_12500 [Bacillus cereus BDRD-ST26]
          Length = 223

 Score =  184 bits (467), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 93/240 (38%), Positives = 153/240 (63%), Gaps = 22/240 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+++  K   A+++FSGGQDS+TCL WA+++F  VE ++F+Y QR+K+E++C   + K++
Sbjct: 1   MSEM--KKEKAVVVFSGGQDSTTCLFWAMEQFAEVEAVTFNYNQRHKLEIDCAAEIAKEL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                       +  +L +++L  ++ ++LT  ++ +  ++  LP+TFV GRN++FL FA
Sbjct: 59  G----------IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFA 108

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           A LA ++G  +IV GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K E
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAE 168

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           TWKL+ ++G  + V    E++ TCY G        G GC  CPAC LR+ G   + ++ +
Sbjct: 169 TWKLSDELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 219


>gi|229172079|ref|ZP_04299644.1| hypothetical protein bcere0006_11930 [Bacillus cereus MM3]
 gi|228611422|gb|EEK68679.1| hypothetical protein bcere0006_11930 [Bacillus cereus MM3]
          Length = 223

 Score =  184 bits (466), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 93/240 (38%), Positives = 152/240 (63%), Gaps = 22/240 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+++  K   A+++FSGGQDS+TCL WA+ +F  VE ++F+Y QR+K+E++C   + K++
Sbjct: 1   MSEM--KKEKAVVVFSGGQDSTTCLFWAIKQFAEVEAVTFNYNQRHKLEIDCAAEIAKEL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                       +  +L +++L  ++ ++LT  ++ +  ++  LP+TFV GRN++FL FA
Sbjct: 59  G----------IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFA 108

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           A LA ++G  +IV GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K E
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAE 168

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           TWKL+ ++G  + V    E++ TCY G        G GC  CPAC LR+ G   + ++ +
Sbjct: 169 TWKLSDELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 219


>gi|15614807|ref|NP_243110.1| aluminum resistance protein [Bacillus halodurans C-125]
 gi|81786626|sp|Q9KAP3|QUEC_BACHD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|10174863|dbj|BAB05963.1| aluminum resistance protein [Bacillus halodurans C-125]
          Length = 223

 Score =  184 bits (466), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 99/238 (41%), Positives = 143/238 (60%), Gaps = 21/238 (8%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  K   A+++FSGGQDS+TCL WAL  FD V T++FDYGQR+  E+EC   + +++   
Sbjct: 1   MENKKKKAVVVFSGGQDSTTCLFWALKTFDEVATVTFDYGQRHAEEIECAKEIAEQLG-- 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL--PNTFVPGRNIIFLVFAAT 121
                       +L + +L  ++ S+LT+         N   P+TFVPGRN +FL FAA 
Sbjct: 59  --------VSFRVLDMTLLNQLTESALTREEIAVKDGENGELPSTFVPGRNQLFLSFAAV 110

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            A ++G  ++V GVCETDYSGYPDCR   I+++   +NL M+    +HTPLMWL K ETW
Sbjct: 111 YAKQIGARHLVTGVCETDYSGYPDCRDVFIKSLNVTLNLAMDDQFVIHTPLMWLDKAETW 170

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           KLA ++G    ++ + E++ TCY G R      G GC  CPAC LR++G   +  + +
Sbjct: 171 KLADELGA---LDFVREKTLTCYHGIR------GDGCGECPACMLRRRGLELYLAEKE 219


>gi|218529380|ref|YP_002420196.1| exsB protein [Methylobacterium chloromethanicum CM4]
 gi|259551539|sp|B7KR63|QUEC_METC4 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|218521683|gb|ACK82268.1| exsB protein [Methylobacterium chloromethanicum CM4]
          Length = 243

 Score =  184 bits (466), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 137/229 (59%), Positives = 173/229 (75%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           L+LFSGGQDS+TCL+WALDRF  VETL FDYGQR+ VEL+ R  +R+ +  L P W   L
Sbjct: 15  LVLFSGGQDSATCLAWALDRFPHVETLGFDYGQRHWVELDRRAALRQGLTALDPAWGRRL 74

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G DH L LA LG+IS ++LT++ A+    + LPNTFVPGRN+ FL FAA LAYR G+ +I
Sbjct: 75  GPDHTLALAALGEISDTALTRDSAIAFARDGLPNTFVPGRNLAFLTFAAALAYRRGLRHI 134

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V G+CETDYSGYPDCR DTI+A++ A+NLGME    +HTPLMW+ K +TW LA+ +GG+ 
Sbjct: 135 VGGMCETDYSGYPDCRDDTIKALQVALNLGMERRFVLHTPLMWIDKAQTWALAETLGGRA 194

Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
           LV L++EESHTCYLG+R  R+EWGYGC +CPAC LR KG+  +     D
Sbjct: 195 LVELVVEESHTCYLGERGARHEWGYGCGTCPACDLRAKGFSRYLAARAD 243


>gi|330994294|ref|ZP_08318222.1| 7-cyano-7-deazaguanine synthase [Gluconacetobacter sp. SXCC-1]
 gi|329758761|gb|EGG75277.1| 7-cyano-7-deazaguanine synthase [Gluconacetobacter sp. SXCC-1]
          Length = 245

 Score =  184 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 133/227 (58%), Positives = 168/227 (74%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS+TCL+WAL RF RVETL FDYGQR+ VELECR  +R+ +    P+W   
Sbjct: 15  ALVLFSGGQDSATCLAWALARFGRVETLGFDYGQRHAVELECRATLREGMATENPQWAAR 74

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG DH L LA+LG +S ++LT+   + + +N LPNTFVPGRN++FL FAA LA R  I +
Sbjct: 75  LGADHTLDLAVLGTLSDTALTREAEITLNENGLPNTFVPGRNLLFLTFAAALAARRNIRH 134

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           I+ GVCETDYSGYPDCR DTI++++  +NLGM SH  +HTPLMWL K  TW+LA+ +GG 
Sbjct: 135 IITGVCETDYSGYPDCRDDTIKSLQVTLNLGMASHYVLHTPLMWLDKARTWELARTLGGD 194

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            LV LI  ESH+CYLG R   + WG+GC +CPAC LR+ GW  F  +
Sbjct: 195 ALVGLINRESHSCYLGTRGTLHPWGHGCGTCPACQLRKAGWERFLAE 241


>gi|229029111|ref|ZP_04185209.1| hypothetical protein bcere0028_12130 [Bacillus cereus AH1271]
 gi|228732209|gb|EEL83093.1| hypothetical protein bcere0028_12130 [Bacillus cereus AH1271]
          Length = 223

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 93/240 (38%), Positives = 153/240 (63%), Gaps = 22/240 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+++  K   A+++FSGGQDS+TCL WA+++F  VE ++F+Y QR+K+E++C   + K++
Sbjct: 1   MSEM--KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAEIAKEL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                       +  +L +++L  ++ ++LT  ++ +  ++  LP+TFV GRN++FL FA
Sbjct: 59  G----------IKHTVLDMSLLNQLAPNALTRTDLEITHEEGELPSTFVDGRNLLFLSFA 108

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           A LA ++G  +IV GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K E
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAE 168

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           TWKL+ ++G  + V    E++ TCY G        G GC  CPAC LR+ G   + ++ +
Sbjct: 169 TWKLSDELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 219


>gi|228900021|ref|ZP_04064257.1| hypothetical protein bthur0014_12300 [Bacillus thuringiensis IBL
           4222]
 gi|228907072|ref|ZP_04070936.1| hypothetical protein bthur0013_12450 [Bacillus thuringiensis IBL
           200]
 gi|228964403|ref|ZP_04125517.1| hypothetical protein bthur0004_12520 [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228795260|gb|EEM42752.1| hypothetical protein bthur0004_12520 [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228852576|gb|EEM97366.1| hypothetical protein bthur0013_12450 [Bacillus thuringiensis IBL
           200]
 gi|228859635|gb|EEN04059.1| hypothetical protein bthur0014_12300 [Bacillus thuringiensis IBL
           4222]
          Length = 223

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 93/240 (38%), Positives = 153/240 (63%), Gaps = 22/240 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+++  K   A+++FSGGQDS+TCL WA+++F  VE ++F+Y QR+K+E++C   + K++
Sbjct: 1   MSEM--KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAKIAKEL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                       +  +L +++L  ++ ++LT  ++ +  ++  LP+TFV GRN++FL FA
Sbjct: 59  G----------IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFA 108

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           A LA ++G  +IV GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K E
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAE 168

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           TWKL+ ++G  + V    E++ TCY G        G GC  CPAC LR+ G   + ++ +
Sbjct: 169 TWKLSDELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 219


>gi|228920152|ref|ZP_04083501.1| hypothetical protein bthur0011_11690 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228938555|ref|ZP_04101163.1| hypothetical protein bthur0008_12200 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228951821|ref|ZP_04113919.1| hypothetical protein bthur0006_12350 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228971434|ref|ZP_04132060.1| hypothetical protein bthur0003_12140 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228978047|ref|ZP_04138426.1| hypothetical protein bthur0002_12510 [Bacillus thuringiensis Bt407]
 gi|229016689|ref|ZP_04173622.1| hypothetical protein bcere0030_12600 [Bacillus cereus AH1273]
 gi|229022901|ref|ZP_04179421.1| hypothetical protein bcere0029_12470 [Bacillus cereus AH1272]
 gi|229043182|ref|ZP_04190905.1| hypothetical protein bcere0027_12360 [Bacillus cereus AH676]
 gi|229068991|ref|ZP_04202284.1| hypothetical protein bcere0025_11990 [Bacillus cereus F65185]
 gi|229078625|ref|ZP_04211182.1| hypothetical protein bcere0023_12900 [Bacillus cereus Rock4-2]
 gi|229108896|ref|ZP_04238500.1| hypothetical protein bcere0018_11720 [Bacillus cereus Rock1-15]
 gi|229126757|ref|ZP_04255769.1| hypothetical protein bcere0015_12140 [Bacillus cereus BDRD-Cer4]
 gi|229144044|ref|ZP_04272460.1| hypothetical protein bcere0012_12070 [Bacillus cereus BDRD-ST24]
 gi|229177847|ref|ZP_04305220.1| hypothetical protein bcere0005_12110 [Bacillus cereus 172560W]
 gi|228605638|gb|EEK63086.1| hypothetical protein bcere0005_12110 [Bacillus cereus 172560W]
 gi|228639441|gb|EEK95855.1| hypothetical protein bcere0012_12070 [Bacillus cereus BDRD-ST24]
 gi|228656697|gb|EEL12523.1| hypothetical protein bcere0015_12140 [Bacillus cereus BDRD-Cer4]
 gi|228674552|gb|EEL29792.1| hypothetical protein bcere0018_11720 [Bacillus cereus Rock1-15]
 gi|228704695|gb|EEL57124.1| hypothetical protein bcere0023_12900 [Bacillus cereus Rock4-2]
 gi|228714103|gb|EEL65985.1| hypothetical protein bcere0025_11990 [Bacillus cereus F65185]
 gi|228726144|gb|EEL77378.1| hypothetical protein bcere0027_12360 [Bacillus cereus AH676]
 gi|228738436|gb|EEL88912.1| hypothetical protein bcere0029_12470 [Bacillus cereus AH1272]
 gi|228744597|gb|EEL94666.1| hypothetical protein bcere0030_12600 [Bacillus cereus AH1273]
 gi|228781708|gb|EEM29907.1| hypothetical protein bthur0002_12510 [Bacillus thuringiensis Bt407]
 gi|228788301|gb|EEM36254.1| hypothetical protein bthur0003_12140 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228807744|gb|EEM54265.1| hypothetical protein bthur0006_12350 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228821153|gb|EEM67170.1| hypothetical protein bthur0008_12200 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228839608|gb|EEM84900.1| hypothetical protein bthur0011_11690 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 223

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 93/240 (38%), Positives = 153/240 (63%), Gaps = 22/240 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+++  K   A+++FSGGQDS+TCL WA+++F  VE ++F+Y QR+K+E++C   + K++
Sbjct: 1   MSEM--KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAEIAKEL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                       +  +L +++L  ++ ++LT  ++ +  ++  LP+TFV GRN++FL FA
Sbjct: 59  G----------IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFA 108

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           A LA ++G  +IV GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K E
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAE 168

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           TWKL+ ++G  + V    E++ TCY G        G GC  CPAC LR+ G   + ++ +
Sbjct: 169 TWKLSDELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 219


>gi|239826405|ref|YP_002949029.1| exsB protein [Geobacillus sp. WCH70]
 gi|259551536|sp|C5D7Y2|QUEC_GEOSW RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|239806698|gb|ACS23763.1| exsB protein [Geobacillus sp. WCH70]
          Length = 221

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 97/229 (42%), Positives = 146/229 (63%), Gaps = 20/229 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WAL +FD VE ++FDYGQR+++E+E    + K++      
Sbjct: 2   KKEKAIVVFSGGQDSTTCLFWALKQFDEVEAVTFDYGQRHRLEIEVAASIAKELG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    +L +++L  ++ ++LT+ ++A++  +  LP+TFV GRN++FL FAA LA +
Sbjct: 57  -----VPHTVLDMSLLNQLAPNALTRSDIAIEQNEGQLPSTFVDGRNLLFLSFAAVLAKQ 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G  ++V GVCETD+SGYPDCR   I+++   +NL M+    +HTPLMWL K +TWKLA 
Sbjct: 112 KGARHLVTGVCETDFSGYPDCRDIFIKSLNVTLNLAMDYQFVIHTPLMWLTKAKTWKLAD 171

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           ++G  D V     ++ TCY G          GC  CPAC LR++G  E+
Sbjct: 172 ELGAFDFVR---TKTLTCYNGI------IADGCGECPACVLRRRGLEEY 211


>gi|330825968|ref|YP_004389271.1| exsB protein [Alicycliphilus denitrificans K601]
 gi|329311340|gb|AEB85755.1| exsB protein [Alicycliphilus denitrificans K601]
          Length = 239

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 118/230 (51%), Positives = 165/230 (71%), Gaps = 2/230 (0%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              AL+L SGGQDS+TCL+WAL R+  VET+ FDYGQR++ EL+CR  +R  +  +   W
Sbjct: 6   RRRALVLLSGGQDSATCLAWALARYAHVETIGFDYGQRHRAELDCRQRLRAGLQAMP--W 63

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              LG DH+L + +L  +  S++T+ VA+ +Q + LPNTFVPGRN++F   AA LAYR G
Sbjct: 64  SGRLGPDHLLTVDVLAQLGGSAMTEEVAIAMQQDGLPNTFVPGRNLLFFTLAAALAYRRG 123

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +V G+ ETDYSGYPDCR +T++A++ A++LG++  +T+ TPLMW+ K  TW LA  +
Sbjct: 124 LQVLVGGMSETDYSGYPDCRDNTLKALQVALSLGLDRPLTLETPLMWIDKAGTWALAHQL 183

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           GG  L  LI  +SHTCYLG+RD+ ++WGYGC  CPAC LR +GW ++ EK
Sbjct: 184 GGDALAELIRRDSHTCYLGQRDRLHDWGYGCGRCPACELRAQGWAQWAEK 233


>gi|218781986|ref|YP_002433304.1| exsB protein [Desulfatibacillum alkenivorans AK-01]
 gi|254764330|sp|B8FMW6|QUEC_DESAA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|218763370|gb|ACL05836.1| exsB protein [Desulfatibacillum alkenivorans AK-01]
          Length = 233

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 77/251 (30%), Positives = 114/251 (45%), Gaps = 33/251 (13%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN I  +   A++L SGG DS+T ++ A D   +V  LSF YGQR+  ELE    V K +
Sbjct: 1   MNAI--QKEKAVVLLSGGLDSATAMAIAKDMGFQVYALSFSYGQRHTTELEAAKRVAKTL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT---FVPGRNIIFLV 117
             +  +  +       + L   G  + ++       +  ++        +VP RN IFL 
Sbjct: 59  GAVEHQVAN-------IDLTCFGGSALTADLDVPKGRAPEDMEKEIPVTYVPARNTIFLS 111

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM------ESHVTVHTP 171
           FA   A  L  ++I IGV   DYSGYPDCR + I+A     NL         + + +HTP
Sbjct: 112 FALAWAEVLETSHIFIGVNAVDYSGYPDCRPEYIQAFTAMANLATKAGVEGRTKIEIHTP 171

Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
           L+ L K +  +    +G      +    +H+CY          G  C  C +C LR+KG+
Sbjct: 172 LIDLTKAQIIQKGIALG------VDYGLTHSCYDP-----SPEGLACGQCDSCLLRKKGF 220

Query: 232 MEFK----EKY 238
            E       KY
Sbjct: 221 AEAGIPDPTKY 231


>gi|228984515|ref|ZP_04144692.1| hypothetical protein bthur0001_12200 [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|229155007|ref|ZP_04283121.1| hypothetical protein bcere0010_12010 [Bacillus cereus ATCC 4342]
 gi|228628565|gb|EEK85278.1| hypothetical protein bcere0010_12010 [Bacillus cereus ATCC 4342]
 gi|228775218|gb|EEM23607.1| hypothetical protein bthur0001_12200 [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 223

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 93/240 (38%), Positives = 153/240 (63%), Gaps = 22/240 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+++  K   A+++FSGGQDS+TCL WA+++F  VE ++F+Y QR+K+E++C   + K++
Sbjct: 1   MSEM--KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCATEIAKEL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                       +  +L +++L  ++ ++LT  ++ +  ++  LP+TFV GRN++FL FA
Sbjct: 59  G----------IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFA 108

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           A LA ++G  +IV GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K E
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAE 168

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           TWKL+ ++G  + V    E++ TCY G        G GC  CPAC LR+ G   + ++ +
Sbjct: 169 TWKLSDELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 219


>gi|94987242|ref|YP_595175.1| hypothetical protein LI0800 [Lawsonia intracellularis PHE/MN1-00]
 gi|118574286|sp|Q1MQ73|QUEC_LAWIP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|94731491|emb|CAJ54854.1| Conserved hypothetical protein [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 238

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 115/236 (48%), Positives = 156/236 (66%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      ALLLFSGGQDS TCL WAL  F  + T+ F YGQR+ VE++CR  +R KI +L
Sbjct: 1   MYHLNQKALLLFSGGQDSGTCLGWALSNFSHIITIGFSYGQRHSVEMQCRTNIRNKISKL 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              W+  LGED+I  L I   +  +++T  + +      LPNTFVPGRNI FL  AA  A
Sbjct: 61  SKIWEQRLGEDYIFSLDIFSQLGETAITSELEIVFDKQGLPNTFVPGRNIFFLTIAAAFA 120

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           +R  I +++IG CETD+SGYPDC+ ++I+A + A++LG+   +T+HTPLMWL K +TW+L
Sbjct: 121 WRNSIRHLIIGTCETDFSGYPDCQDNSIKATQLALSLGLGEDITIHTPLMWLTKAQTWEL 180

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           A  +GG   V+LI  E+H+CYL      +EWGYGC +CPAC LR+ GW  F  K +
Sbjct: 181 ALHLGGSKFVDLIRNETHSCYLNDHTTSHEWGYGCGTCPACKLRKNGWETFLMKKR 236


>gi|228914011|ref|ZP_04077633.1| hypothetical protein bthur0012_12480 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228845616|gb|EEM90645.1| hypothetical protein bthur0012_12480 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 223

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 93/240 (38%), Positives = 154/240 (64%), Gaps = 22/240 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+++  K   A+++FSGGQDS+TCL WA+++F  VE ++F+Y QR+K+E++C + + K++
Sbjct: 1   MSEM--KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAVKIAKEL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                       +  +L +++L  ++ ++LT  ++ +  ++  LP+TFV GRN++FL FA
Sbjct: 59  G----------IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFA 108

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           A LA ++G  +IV GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K E
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAE 168

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           TWKL+ ++G  + V    E++ TCY G        G GC  CPAC LR+ G   + ++ +
Sbjct: 169 TWKLSDELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 219


>gi|118476910|ref|YP_894061.1| aluminum resistance protein [Bacillus thuringiensis str. Al Hakam]
 gi|229090393|ref|ZP_04221636.1| hypothetical protein bcere0021_12220 [Bacillus cereus Rock3-42]
 gi|118416135|gb|ABK84554.1| preQ(0) biosynthesis protein QueC [Bacillus thuringiensis str. Al
           Hakam]
 gi|228692976|gb|EEL46694.1| hypothetical protein bcere0021_12220 [Bacillus cereus Rock3-42]
          Length = 223

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 93/240 (38%), Positives = 153/240 (63%), Gaps = 22/240 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+++  K   A+++FSGGQDS+TCL WA+++F  VE ++F+Y QR+K+E++C   + K++
Sbjct: 1   MSEM--KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAEIAKEL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                       +  +L +++L  ++ ++LT  ++ +  ++  LP+TFV GRN++FL FA
Sbjct: 59  G----------IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFA 108

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           A LA ++G  +IV GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K E
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAE 168

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           TWKL+ ++G  + V    E++ TCY G        G GC  CPAC LR+ G   + ++ +
Sbjct: 169 TWKLSDELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 219


>gi|110816227|sp|Q5L1C0|QUEC_GEOKA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
          Length = 221

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 96/238 (40%), Positives = 144/238 (60%), Gaps = 25/238 (10%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN+       A+++FSGGQDS+TCL WA  +F  VE ++FDYGQR++ E++    +  ++
Sbjct: 1   MNE-----EKAVVVFSGGQDSTTCLFWAKKQFGEVEAVTFDYGQRHRREIDVAQAIADEL 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                          +L L++LG ++ ++LT +++A++ +   LP TFV GRN++FL FA
Sbjct: 56  G----------VRHTVLDLSLLGQLAPNALTRRDIAIEQKKGELPTTFVDGRNLLFLSFA 105

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           A  A + G  +IV GVCETD+SGYPDCR   I+++   +NL M+    +HTPLMWL K E
Sbjct: 106 AVFAKQRGARHIVTGVCETDFSGYPDCRDVFIKSLNVTLNLAMDYEFVIHTPLMWLTKAE 165

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           TWKLA ++G    +  I  ++ TCY G          GC  CPAC LR++G  E+  +
Sbjct: 166 TWKLADELGA---LEFIRTKTLTCYNGI------IADGCGECPACALRKRGLDEYLRE 214


>gi|65318709|ref|ZP_00391668.1| COG0603: Predicted PP-loop superfamily ATPase [Bacillus anthracis
           str. A2012]
 gi|228926470|ref|ZP_04089542.1| hypothetical protein bthur0010_11890 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228932722|ref|ZP_04095594.1| hypothetical protein bthur0009_11980 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228945038|ref|ZP_04107399.1| hypothetical protein bthur0007_12040 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|229120979|ref|ZP_04250221.1| hypothetical protein bcere0016_12880 [Bacillus cereus 95/8201]
 gi|229183633|ref|ZP_04310856.1| hypothetical protein bcere0004_12050 [Bacillus cereus BGSC 6E1]
 gi|228599876|gb|EEK57473.1| hypothetical protein bcere0004_12050 [Bacillus cereus BGSC 6E1]
 gi|228662639|gb|EEL18237.1| hypothetical protein bcere0016_12880 [Bacillus cereus 95/8201]
 gi|228814707|gb|EEM60967.1| hypothetical protein bthur0007_12040 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228826927|gb|EEM72689.1| hypothetical protein bthur0009_11980 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228833294|gb|EEM78859.1| hypothetical protein bthur0010_11890 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
          Length = 223

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 93/240 (38%), Positives = 154/240 (64%), Gaps = 22/240 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+++  K   A+++FSGGQDS+TCL WA+++F  VE ++F+Y QR+K+E++C + + K++
Sbjct: 1   MSEM--KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAVEIAKEL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                       +  +L +++L  ++ ++LT  ++ +  ++  LP+TFV GRN++FL FA
Sbjct: 59  G----------IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFA 108

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           A LA ++G  +IV GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K E
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAE 168

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           TWKL+ ++G  + V    E++ TCY G        G GC  CPAC LR+ G   + ++ +
Sbjct: 169 TWKLSDELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 219


>gi|229057066|ref|ZP_04196458.1| hypothetical protein bcere0026_11820 [Bacillus cereus AH603]
 gi|229132237|ref|ZP_04261093.1| hypothetical protein bcere0014_11750 [Bacillus cereus BDRD-ST196]
 gi|229166274|ref|ZP_04294033.1| hypothetical protein bcere0007_12480 [Bacillus cereus AH621]
 gi|228617219|gb|EEK74285.1| hypothetical protein bcere0007_12480 [Bacillus cereus AH621]
 gi|228651175|gb|EEL07154.1| hypothetical protein bcere0014_11750 [Bacillus cereus BDRD-ST196]
 gi|228720207|gb|EEL71786.1| hypothetical protein bcere0026_11820 [Bacillus cereus AH603]
          Length = 223

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 94/240 (39%), Positives = 153/240 (63%), Gaps = 22/240 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+++  K   A+++FSGGQDS+TCL WA+ +F+ VE ++F+Y QR+K+E++C   + K++
Sbjct: 1   MSEM--KKEKAVVVFSGGQDSTTCLFWAIQQFEEVEAVTFNYNQRHKLEIDCAAEIAKEL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                       +  IL +++L  ++ ++LT  ++ +  ++  LP+TFV GRN++FL FA
Sbjct: 59  G----------IKHTILDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFA 108

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           A LA ++G  +IV GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K E
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAE 168

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           TWKL+ ++G  + V    E++ TCY G        G GC  CPAC LR+ G   + ++ +
Sbjct: 169 TWKLSDELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 219


>gi|254516699|ref|ZP_05128758.1| exsB protein [gamma proteobacterium NOR5-3]
 gi|219675122|gb|EED31489.1| exsB protein [gamma proteobacterium NOR5-3]
          Length = 232

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 78/249 (31%), Positives = 116/249 (46%), Gaps = 30/249 (12%)

Query: 1   MND--IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           M++   +  +  A++L SGG DS+T L+ A ++  R  +LSFDYGQR++ EL     V K
Sbjct: 1   MSEPPSMNSSKKAVILVSGGLDSTTVLALAKEQGYRCYSLSFDYGQRHRAELFAAERVSK 60

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
            + ++  K          L L  +G  + +  +  V  +  +      +VP RN +FL  
Sbjct: 61  TLGDVEHKVV-------RLNLDSIGGSALTDDSIAVPEEASEGIPVT-YVPARNTVFLSI 112

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLM 173
           A   A  LG  +I IGV   DYSGYPDCR   I A +   N+     V      +HTPLM
Sbjct: 113 ALGWAEVLGAQDIFIGVNAVDYSGYPDCRPAFIDAFQQLANVATRVGVEGGSYQIHTPLM 172

Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
            L K E  KL   +      ++   ++ +CY    D     G  C  C AC LR+ G++ 
Sbjct: 173 DLGKDEIVKLGARL------DVDYSQTVSCYQATDD-----GLACGVCDACRLRRDGFVN 221

Query: 234 FK----EKY 238
                  +Y
Sbjct: 222 AGLEDVTRY 230


>gi|228990440|ref|ZP_04150405.1| hypothetical protein bpmyx0001_12020 [Bacillus pseudomycoides DSM
           12442]
 gi|228996541|ref|ZP_04156180.1| hypothetical protein bmyco0003_11280 [Bacillus mycoides Rock3-17]
 gi|229004191|ref|ZP_04161992.1| hypothetical protein bmyco0002_11560 [Bacillus mycoides Rock1-4]
 gi|228757052|gb|EEM06296.1| hypothetical protein bmyco0002_11560 [Bacillus mycoides Rock1-4]
 gi|228763173|gb|EEM12081.1| hypothetical protein bmyco0003_11280 [Bacillus mycoides Rock3-17]
 gi|228768966|gb|EEM17564.1| hypothetical protein bpmyx0001_12020 [Bacillus pseudomycoides DSM
           12442]
          Length = 223

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 93/240 (38%), Positives = 152/240 (63%), Gaps = 22/240 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+++  K   A+++FSGGQDS+TCL WA+ +F  VE ++F+Y QR+K+E++C   + K++
Sbjct: 1   MSEM--KKEKAVVVFSGGQDSTTCLFWAMQQFAEVEAVTFNYNQRHKLEIDCAADIAKEL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                       +  +L +++L  ++ ++LT  ++ +  ++  LP+TFV GRN++FL FA
Sbjct: 59  G----------IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFA 108

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           A LA ++G  +IV GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K E
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAE 168

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           TWKL+ ++G  + V    E++ TCY G        G GC  CPAC LR+ G   + ++ +
Sbjct: 169 TWKLSDELGAFEFVR---EKTLTCYNGI------IGDGCGECPACKLRKAGLDTYLQERE 219


>gi|229010736|ref|ZP_04167933.1| hypothetical protein bmyco0001_11910 [Bacillus mycoides DSM 2048]
 gi|228750410|gb|EEM00239.1| hypothetical protein bmyco0001_11910 [Bacillus mycoides DSM 2048]
          Length = 223

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 94/240 (39%), Positives = 154/240 (64%), Gaps = 22/240 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+++  K   A+++FSGGQDS+TCL WA+ +F+ VE ++F+Y QR+K+E++C + + K++
Sbjct: 1   MSEM--KKEKAVVVFSGGQDSTTCLFWAIQQFEEVEAVTFNYNQRHKLEIDCAVEIAKEL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                       +  IL +++L  ++ ++LT  ++ +  ++  LP+TFV GRN++FL FA
Sbjct: 59  G----------IKHTILDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFA 108

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           A LA ++G  +IV GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K E
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFIIHTPLMWIDKAE 168

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           TWKL+ ++G  + V    E++ TCY G        G GC  CPAC LR+ G   + ++ +
Sbjct: 169 TWKLSDELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 219


>gi|311030028|ref|ZP_07708118.1| aluminum resistance protein [Bacillus sp. m3-13]
 gi|311032348|ref|ZP_07710438.1| aluminum resistance protein [Bacillus sp. m3-13]
          Length = 223

 Score =  183 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 95/234 (40%), Positives = 151/234 (64%), Gaps = 20/234 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +K+   A+++FSGGQDS+TCL WA+  FD VE ++F YGQR+++E++C   + K++    
Sbjct: 1   MKQKEKAMVVFSGGQDSTTCLIWAMKEFDEVEAVTFHYGQRHELEIDCATSIAKELG--- 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                   +  IL +++LG ++ ++LT++ + ++ ++  LP+TFV GRN++FL FAA  A
Sbjct: 58  -------VKHRILDMSLLGQLTPNALTRDNIEIEEKEGELPSTFVDGRNLLFLSFAAVAA 110

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            ++G  +IV GVCETD+SGYPDCR   I+++   +NL M+    +HTPLMWL K ETW+L
Sbjct: 111 KQIGARHIVTGVCETDFSGYPDCRDVFIKSMNVTLNLSMDYPFVIHTPLMWLNKEETWEL 170

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           A D+   D ++ +  ++ TCY G          GC  CPAC LR++G  ++  K
Sbjct: 171 ADDL---DALDFVRTKTLTCYNG------VIADGCGECPACKLRKRGLDDYLVK 215


>gi|229149641|ref|ZP_04277872.1| hypothetical protein bcere0011_12000 [Bacillus cereus m1550]
 gi|228633851|gb|EEK90449.1| hypothetical protein bcere0011_12000 [Bacillus cereus m1550]
          Length = 223

 Score =  183 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 93/240 (38%), Positives = 153/240 (63%), Gaps = 22/240 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+++  K   A+++FSGGQDS+TCL WA+++F  VE ++F+Y QR+K+E++C   + K++
Sbjct: 1   MSEM--KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAEIAKEL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                       +  +L +++L  ++ ++LT  ++ +  ++  LP+TFV GRN++FL FA
Sbjct: 59  G----------IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFA 108

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           A LA ++G  +IV GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K E
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAE 168

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           TWKL+ ++G  + V    E++ TCY G        G GC  CPAC LR+ G   + ++ +
Sbjct: 169 TWKLSDELGAFEFVR---EKTLTCYKGI------IGDGCGECPACQLRKAGLDTYLQERE 219


>gi|229189522|ref|ZP_04316538.1| hypothetical protein bcere0002_12010 [Bacillus cereus ATCC 10876]
 gi|228593967|gb|EEK51770.1| hypothetical protein bcere0002_12010 [Bacillus cereus ATCC 10876]
          Length = 223

 Score =  183 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 93/240 (38%), Positives = 153/240 (63%), Gaps = 22/240 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+++  K   A+++FSGGQDS+TCL WA+++F  VE ++F+Y QR+K+E++C + + K++
Sbjct: 1   MSEM--KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAVEIAKEL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                       +  +L +++L  ++ ++LT  ++ +  ++  LP+TFV GRN++FL FA
Sbjct: 59  G----------IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFA 108

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           A LA ++G  +IV GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K E
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAE 168

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           TWKL+  +G  + V    E++ TCY G        G GC  CPAC LR+ G   + ++ +
Sbjct: 169 TWKLSDKLGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 219


>gi|301063542|ref|ZP_07204068.1| protein ExsB [delta proteobacterium NaphS2]
 gi|300442351|gb|EFK06590.1| protein ExsB [delta proteobacterium NaphS2]
          Length = 228

 Score =  183 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 74/243 (30%), Positives = 109/243 (44%), Gaps = 27/243 (11%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      A++L SGG DS+T  + A      V  L+F YGQR+ VEL+    V   +   
Sbjct: 1   MTAFKEKAVVLLSGGLDSTTVAAIACSEGYDVFALTFRYGQRHAVELKAAEKVAHNLGLT 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKI---QDNNLPNTFVPGRNIIFLVFAA 120
                D       L L  +G  + +        +     +  +P T+VP RN IFL +A 
Sbjct: 61  EHLIVD-------LDLRKIGGSALTDHIDVPKRRGAELSEEEIPVTYVPARNTIFLSYAL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMW 174
             A  LG  NI IGV   DYSGYPDCR + I+A E   NL  ++ V       + TP+++
Sbjct: 114 AWAEVLGAWNIFIGVNAVDYSGYPDCRAEFIKAFEEMANLATKAGVTLTRRLKIRTPVIY 173

Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           + K +  K    +G      +    +H+CY          G  C  C +C LR+KG+ E 
Sbjct: 174 MSKGDIIKTGLKLG------VDYTLTHSCYDP-----SPDGKACGLCDSCLLRKKGFEEA 222

Query: 235 KEK 237
             +
Sbjct: 223 GVE 225


>gi|237800230|ref|ZP_04588691.1| exsB protein [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|237806418|ref|ZP_04593122.1| exsB protein [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331023087|gb|EGI03144.1| exsB protein [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331027531|gb|EGI07586.1| exsB protein [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 229

 Score =  183 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 71/247 (28%), Positives = 107/247 (43%), Gaps = 28/247 (11%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN++      A++L SGG DS+T ++ AL       T+SFDYGQR++ EL+    V + +
Sbjct: 1   MNELTNTGKRAVILLSGGLDSATVVAMALAEGYACYTMSFDYGQRHRAELDAAARVARDL 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  K          L L  +G  + +  +  V     +      +VP RN +FL  A 
Sbjct: 61  GAVEHKVIG-------LNLNGIGGSALTDSSIAVPESPSEGIPVT-YVPARNTVFLSLAL 112

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWL 175
             A  LG  +I IGV   DYSGYPDCR + + + E   NL  +        T+  PL  L
Sbjct: 113 GWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQNL 172

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K +  K    +G      +    + +CY          G  C  C +C LR +G+    
Sbjct: 173 SKSDIVKAGSALG------VDYSLTVSCYQADD-----QGRACGKCDSCRLRAEGFSAAG 221

Query: 236 ----EKY 238
                +Y
Sbjct: 222 MTDPTRY 228


>gi|229160392|ref|ZP_04288390.1| hypothetical protein bcere0009_11860 [Bacillus cereus R309803]
 gi|228623116|gb|EEK79944.1| hypothetical protein bcere0009_11860 [Bacillus cereus R309803]
          Length = 223

 Score =  183 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 94/240 (39%), Positives = 153/240 (63%), Gaps = 22/240 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+++  K   A+++FSGGQDS+TCL WA+++F  VE ++F+Y QR+K+E++C   + K++
Sbjct: 1   MSEM--KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAADIAKEL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                       +  +L +++L  ++ ++LT  ++ +  Q+  LP+TFV GRN++FL FA
Sbjct: 59  G----------IKHTVLDMSLLNQLAPNALTRTDMEITHQEGELPSTFVDGRNLLFLSFA 108

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           A LA ++G  +IV GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K E
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAE 168

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           TWKL+ ++G  + V    E++ TCY G        G GC  CPAC LR+ G   + ++ +
Sbjct: 169 TWKLSDELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 219


>gi|187251576|ref|YP_001876058.1| exsB protein [Elusimicrobium minutum Pei191]
 gi|186971736|gb|ACC98721.1| ExsB protein [Elusimicrobium minutum Pei191]
          Length = 484

 Score =  182 bits (462), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 70/232 (30%), Positives = 109/232 (46%), Gaps = 20/232 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A++LFSGG DS+ CL WAL        LS  YGQ++  E+E    + K+        
Sbjct: 268 KKKAVVLFSGGLDSTVCLYWALKEGYECYALSVAYGQKHLKEIEVAQRLAKQAGVTHKHI 327

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           + +L       LA    +   +      M+    ++P+T+VP RN+IF+   A+ A  +G
Sbjct: 328 EINLP-----WLAEATSLVGGAEIPATPMEQIGKSIPSTYVPARNLIFVSLGASWADSIG 382

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME--SHVTVHTPLMWLKKYETWKLAQ 185
              +V+G    DYSGYPDC     + +  A+ +G        + TP++ L K E  KL +
Sbjct: 383 AEAVVLGPNAVDYSGYPDCTPQFYKPLSEAVRVGTRLGKKFEILTPIIKLNKAEIVKLGR 442

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            +G        LE++ TCY G           C  C +C LR+KG+ +  E+
Sbjct: 443 KLGA------PLEQTWTCYNGGEKP-------CGVCESCKLRRKGFEDAGER 481


>gi|296115260|ref|ZP_06833900.1| exsB protein [Gluconacetobacter hansenii ATCC 23769]
 gi|295978163|gb|EFG84901.1| exsB protein [Gluconacetobacter hansenii ATCC 23769]
          Length = 248

 Score =  182 bits (462), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 132/231 (57%), Positives = 164/231 (70%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            SAL++FSGGQDS+TCL+WAL RF  VETL FDYGQR+ VEL CR  +R  +  L P W 
Sbjct: 14  DSALVVFSGGQDSATCLAWALSRFAHVETLGFDYGQRHSVELSCRAALRDGMARLDPAWA 73

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             LG DH L L  LG +S ++LT+   + + +N LP TFVPGRNIIFL FAA LA R   
Sbjct: 74  ARLGPDHTLSLDALGAVSDTALTREAEITLGENGLPTTFVPGRNIIFLTFAAALAARRNA 133

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
            +IV GVCETDYSGYPDCR DTI+A++  +NLGM S + +HTPLMW+ K +TW +AQ++G
Sbjct: 134 RHIVTGVCETDYSGYPDCRDDTIKALQVTLNLGMASRLVLHTPLMWIDKAQTWLMAQELG 193

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           G  LV LI  ESH+CYLG R   + WG+GC +CPAC LR+ GW  F+   Q
Sbjct: 194 GDALVGLINRESHSCYLGTRGVMHPWGHGCGTCPACQLRRAGWERFRAMTQ 244


>gi|121595065|ref|YP_986961.1| exsB protein [Acidovorax sp. JS42]
 gi|222111408|ref|YP_002553672.1| exsb protein [Acidovorax ebreus TPSY]
 gi|189038887|sp|A1W9G0|QUEC_ACISJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764333|sp|B9MBJ3|QUEC_ACIET RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|120607145|gb|ABM42885.1| preQ(0) biosynthesis protein QueC [Acidovorax sp. JS42]
 gi|221730852|gb|ACM33672.1| exsB protein [Acidovorax ebreus TPSY]
          Length = 239

 Score =  182 bits (462), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 120/234 (51%), Positives = 166/234 (70%), Gaps = 4/234 (1%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+ + ++   AL+L SGGQDS+TCL+WAL R+  VETL FDYGQR++VEL+CR  +   +
Sbjct: 1   MSRLPQR--RALVLLSGGQDSATCLAWALARYGHVETLGFDYGQRHRVELDCRQRLIDGV 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             L   W   LG DH+L + +L  +  S++T +VA+ +Q + LPNTFVPGRN++F   AA
Sbjct: 59  RALP--WPGQLGPDHMLTVDVLAQLGGSAMTDDVAIAMQADGLPNTFVPGRNLLFFTLAA 116

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            LAYR G+  +V G+ ETDYSGYPDCR  T++A++ A++LG++  +T+ TPLMW  K +T
Sbjct: 117 ALAYRRGLDVLVGGMSETDYSGYPDCRDSTLKALQVALSLGVDRPLTLETPLMWRSKADT 176

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           W LAQ +GG  LV LI  ESHTCYLG+R   + WG+GC  CPAC LR +GW ++
Sbjct: 177 WALAQRLGGDALVELIRCESHTCYLGQRGDLHAWGHGCGGCPACELRAQGWEQW 230


>gi|253576605|ref|ZP_04853933.1| exsB protein [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251844019|gb|EES72039.1| exsB protein [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 222

 Score =  182 bits (462), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 100/237 (42%), Positives = 151/237 (63%), Gaps = 20/237 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K   A+++FSGGQDS+TCL WA+ +F  VE ++FDYGQR+K+E+EC   +  ++    
Sbjct: 1   MLKKEKAVVVFSGGQDSTTCLFWAIQQFGEVEAVTFDYGQRHKLEIECAKSITAELG--- 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                   +  +L +++LG ++ ++LT+ ++A++ Q+  LP+TFV GRN +FL FAA LA
Sbjct: 58  -------IKHTVLDMSLLGQLTANALTRSDIAIEHQEGELPSTFVDGRNHLFLSFAAVLA 110

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +G  +IV GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K ETWKL
Sbjct: 111 KGVGAKHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYEFVIHTPLMWIDKAETWKL 170

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
           A ++G  D V    E + TCY G        G GC  CPAC LR+ G  ++  + Q+
Sbjct: 171 ADELGAFDFVR---ERTLTCYNGI------IGDGCGECPACKLRKAGLDKYLLERQE 218


>gi|13474943|ref|NP_106513.1| hypothetical protein mll5936 [Mesorhizobium loti MAFF303099]
 gi|81777876|sp|Q98AM3|QUEC2_RHILO RecName: Full=7-cyano-7-deazaguanine synthase 2; AltName:
           Full=7-cyano-7-carbaguanine synthase 2; AltName:
           Full=PreQ(0) synthase 2; AltName: Full=Queuosine
           biosynthesis protein queC 2
 gi|14025699|dbj|BAB52299.1| mll5936 [Mesorhizobium loti MAFF303099]
          Length = 245

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 123/232 (53%), Positives = 167/232 (71%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +   +AL+LFSGGQDS+TCL+WAL+ F+RVET+ FDYGQR+++EL+ R  + ++I   
Sbjct: 1   MQRDPGTALVLFSGGQDSTTCLAWALENFERVETIGFDYGQRHRIELDVRPYLLERIRTD 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
            P W+  LG DH++ +A+LG IS ++LT+ V + +  N LPNTFVPGRN++FL FAA LA
Sbjct: 61  FPAWRGRLGGDHMIDMAVLGQISDTALTRGVEVALNANGLPNTFVPGRNLLFLGFAAALA 120

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           YRL   ++VIGV ETD   YPDCR D ++AI+ A+NLGME    +HTPLM   K +TW L
Sbjct: 121 YRLSAKHLVIGVAETDRFSYPDCRDDAVKAIQLALNLGMEKRFIIHTPLMHRDKAQTWAL 180

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           A  +GG+ LV LI E SHTCY G R+ R+ WG+GC +C  C LR  GW +F+
Sbjct: 181 ADWLGGEALVKLICEGSHTCYSGDREHRHSWGFGCGTCIECNLRAAGWEQFR 232


>gi|300704847|ref|YP_003746450.1| queuosine biosynthesis protein [Ralstonia solanacearum CFBP2957]
 gi|299072511|emb|CBJ43861.1| queuosine biosynthesis protein [Ralstonia solanacearum CFBP2957]
          Length = 224

 Score =  182 bits (461), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 65/242 (26%), Positives = 102/242 (42%), Gaps = 27/242 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T L+ A  +      LS  YGQR+  ELE    V   +  +  +
Sbjct: 1   MKKRAIVLLSGGLDSATVLAMANAQGFETYALSMRYGQRHSSELEAAKKVAAALGAVRHE 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D       L L   G  + +    +V        +P T+VP RN I L  A   A  +
Sbjct: 61  IVD-------LDLRRFGGSALTDDALDVPTAGVKEGIPITYVPARNTIMLSLALGWAEAV 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETW 181
           G  ++  G    DYSGYPDCR + + A ET  NL  +       + V+ P++ + K E  
Sbjct: 114 GARDLFFGANAVDYSGYPDCRPEFVAAYETLANLATKAGVEGERIRVNAPIIAMTKAEII 173

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EK 237
           +    +G      +    + +CY    +     G  C  C +C +R+ G+         +
Sbjct: 174 QAGARLG------VDYSLTVSCYQADDE-----GRACGVCDSCRIRRAGFEAAGVPDPTR 222

Query: 238 YQ 239
           Y+
Sbjct: 223 YR 224


>gi|207728192|ref|YP_002256586.1| hypothetical protein RSMK04567 [Ralstonia solanacearum MolK2]
 gi|206591437|emb|CAQ57049.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
          Length = 224

 Score =  182 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 65/242 (26%), Positives = 101/242 (41%), Gaps = 27/242 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T L+ A  +      LS  YGQR+  ELE    V   +  +  +
Sbjct: 1   MKKRAIVLLSGGLDSATVLAMANAQGFETYALSMRYGQRHSSELEAAKKVAAALGAVRHE 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D       L L   G  + +    +V        +P T+VP RN I L  A   A  +
Sbjct: 61  IVD-------LDLRRFGGSALTDDALDVPTTGVQEGIPITYVPARNTIMLSLALGWAEAV 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETW 181
           G  ++  G    DYSGYPDCR + + A ET  NL  +       + V+ P++ + K E  
Sbjct: 114 GARDLFFGANAVDYSGYPDCRPEFVAAYETLANLATKAGVEGDRIRVNAPIIAMTKAEII 173

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EK 237
           +    +G      +    + +CY          G  C  C +C +R+ G+         +
Sbjct: 174 QAGARLG------VDYSLTVSCYQADDA-----GRACGVCDSCRIRRAGFEAAGVPDPTR 222

Query: 238 YQ 239
           Y+
Sbjct: 223 YR 224


>gi|330950597|gb|EGH50857.1| ExsB [Pseudomonas syringae Cit 7]
          Length = 229

 Score =  182 bits (460), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 70/247 (28%), Positives = 106/247 (42%), Gaps = 28/247 (11%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+++ K    A++L SGG DS+T ++ A        T+SFDYGQR++ EL+    V   +
Sbjct: 1   MSELTKTEKRAVILLSGGLDSATVVAMARAEGYTCYTMSFDYGQRHRAELDAAARVAGDL 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  K          L L  +G  + +  +  V     +      +VP RN +FL  A 
Sbjct: 61  GAVEHKVIG-------LNLNGIGGSALTDSSIAVPESPSEGIPVT-YVPARNTVFLSLAL 112

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWL 175
             A  LG  +I IGV   DYSGYPDCR + + + E   NL  +        T+  PL  L
Sbjct: 113 GWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQNL 172

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K +  K    +G      +    + +CY          G  C  C +C LR +G+    
Sbjct: 173 SKSDIVKAGTALG------VDYSLTVSCYQADD-----QGRACGKCDSCRLRAEGFTAAG 221

Query: 236 ----EKY 238
                +Y
Sbjct: 222 IADPTRY 228


>gi|299067716|emb|CBJ38925.1| queuosine biosynthesis protein [Ralstonia solanacearum CMR15]
          Length = 224

 Score =  182 bits (460), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 66/242 (27%), Positives = 102/242 (42%), Gaps = 27/242 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T L+ A  +      LS  YGQR+  ELE    V   +  +  +
Sbjct: 1   MKKRAIVLLSGGLDSATVLAMANAQGFETYALSMRYGQRHSSELEAAKKVAAALGAVRHE 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D       L L   G  + +    +V        +P T+VP RN I L  A   A  +
Sbjct: 61  IVD-------LDLRRFGGSALTDDALDVPTTGVQEGIPITYVPARNTIMLSLALGWAEAV 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETW 181
           G  ++  G    DYSGYPDCR + + A ET  NL  +      H+ V+ P++ + K E  
Sbjct: 114 GARDLFFGANAVDYSGYPDCRPEFVAAYETLANLATKAGVEGDHIRVNAPIIAMTKAEII 173

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EK 237
           +    +G      +    + +CY          G  C  C +C +R+ G+         +
Sbjct: 174 QAGARLG------VDYSLTVSCYQADDA-----GRACGVCDSCRIRRAGFEAAGVPDPTR 222

Query: 238 YQ 239
           Y+
Sbjct: 223 YR 224


>gi|330872643|gb|EGH06792.1| exsB protein [Pseudomonas syringae pv. morsprunorum str. M302280PT]
          Length = 229

 Score =  182 bits (460), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 69/247 (27%), Positives = 107/247 (43%), Gaps = 28/247 (11%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+++      A++L SGG DS+T ++ A        T+SFDYGQR++ EL+    V + +
Sbjct: 1   MSELTNTEKRAVILLSGGLDSATVVAMARAEGYACYTMSFDYGQRHRAELDAAARVARDL 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  K          L L  +G  + +  +  V     +      +VP RN +FL  A 
Sbjct: 61  GAVEHKVIG-------LNLNGIGGSALTDSSIAVPESPSEGIPVT-YVPARNTVFLSLAL 112

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWL 175
             A  LG  +I IGV   DYSGYPDCR + + + E   NL  +        T+  PL  L
Sbjct: 113 GWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQNL 172

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K +  K    +G      +    + +CY    +     G  C  C +C LR +G+    
Sbjct: 173 SKSDIVKAGTALG------VDYALTVSCYQADDE-----GRACGRCDSCRLRAEGFTAAG 221

Query: 236 ----EKY 238
                +Y
Sbjct: 222 MADPTRY 228


>gi|187934812|ref|YP_001886173.1| ExsB protein [Clostridium botulinum B str. Eklund 17B]
 gi|187722965|gb|ACD24186.1| ExsB protein [Clostridium botulinum B str. Eklund 17B]
          Length = 233

 Score =  182 bits (460), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 100/234 (42%), Positives = 142/234 (60%), Gaps = 22/234 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+++FSGGQDS+TCL WA  RF  V  +SFDY Q++K+ELEC   + KK        
Sbjct: 15  KEKAIVVFSGGQDSTTCLFWAKKRFREVIAVSFDYNQKHKLELECARDICKK-------- 66

Query: 68  KDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                E HIL L +L  ++ +SLT+    V   +    +PN+FV GRN++FL F A  A 
Sbjct: 67  --YDVEHHILDLNLLNQLAPNSLTRQDISVDKDVPKEGVPNSFVDGRNMLFLTFVAVFAK 124

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           + G+  I+ GV ++D+SGYPDCR   I+++   +NL M+    + TPLMW+ K ETWK+A
Sbjct: 125 QRGVNTIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYQFEILTPLMWINKTETWKMA 184

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
            D+G  ++V    EE+ TCY G        G GC  CPAC LR+ G++EFK++Y
Sbjct: 185 NDLGVLNIVK---EETLTCYNG------VIGNGCGKCPACNLRKNGYLEFKKEY 229


>gi|13541927|ref|NP_111615.1| ATPase [Thermoplasma volcanium GSS1]
 gi|74575424|sp|Q979P0|QUEC_THEVO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|14325358|dbj|BAB60262.1| hypothetical protein [Thermoplasma volcanium GSS1]
          Length = 241

 Score =  182 bits (460), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 76/235 (32%), Positives = 114/235 (48%), Gaps = 27/235 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DSST L++AL++   V  +SFDYGQR+  E++    + K        
Sbjct: 1   MPKKAVVLLSGGLDSSTVLAYALNKGFEVYAISFDYGQRHLKEMKSSEAISKFYNVDRKI 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ--DNNLPNTFVPGRNIIFLVFAATLAY 124
            K        + L  +G  + +   +  +  I   +  +P T+VP RN IFL  AA  A 
Sbjct: 61  VK--------VDLRSIGKSALTDNIEVPSRDISTIEEEIPVTYVPARNTIFLSIAAAYAE 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM----ESHVTVHTPLMWLKKYET 180
            LG   + IG    DYSGYPDCR +   A+E A++LG     +    ++ PL +L K + 
Sbjct: 113 SLGTNEVFIGANAIDYSGYPDCRPEYFNAMENALSLGTKIGLKEKFHINVPLQYLSKADI 172

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            KL   +      N+  E + +CY G+ +        C  C +C LR KG+ME  
Sbjct: 173 VKLGVKL------NVPYELTWSCYKGEEE-------ACGECDSCQLRLKGFMEAG 214


>gi|330964834|gb|EGH65094.1| exsB protein [Pseudomonas syringae pv. actinidiae str. M302091]
          Length = 229

 Score =  182 bits (460), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 69/247 (27%), Positives = 106/247 (42%), Gaps = 28/247 (11%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+++      A++L SGG DS+T ++ A        T+SFDYGQR++ EL+    V + +
Sbjct: 1   MSELTNTEKRAVILLSGGLDSATVVAMARAEGYACYTMSFDYGQRHRAELDAAARVARDL 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  K          L L  +G  + +  +  V     +      +VP RN +FL  A 
Sbjct: 61  GAVEHKVIG-------LNLNGIGGSALTDSSIAVPESPSEGIPVT-YVPARNTVFLSLAL 112

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWL 175
             A  LG  +I IGV   DYSGYPDCR + + + E   NL  +        T+  PL  L
Sbjct: 113 GWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQNL 172

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K +  K    +G      +    + +CY          G  C  C +C LR +G+    
Sbjct: 173 SKSDIVKAGTALG------VDYALTVSCYQADD-----QGRACGKCDSCRLRAEGFTAAG 221

Query: 236 ----EKY 238
                +Y
Sbjct: 222 MADPTRY 228


>gi|304320028|ref|YP_003853671.1| hypothetical protein PB2503_02262 [Parvularcula bermudensis
           HTCC2503]
 gi|303298931|gb|ADM08530.1| hypothetical protein PB2503_02262 [Parvularcula bermudensis
           HTCC2503]
          Length = 243

 Score =  181 bits (459), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 117/226 (51%), Positives = 163/226 (72%), Gaps = 2/226 (0%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+L SGGQDS+TCL+WAL R+  VETL FDYGQR++VEL+ R  VR    +       +
Sbjct: 18  ALVLLSGGQDSATCLAWALGRYRVVETLGFDYGQRHRVELDARERVRAWWAD--RPEGGA 75

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG DH LP+   G+I  +++T  V +++  N LP TFVPGRN+ FLVFA  LA R G++ 
Sbjct: 76  LGADHRLPVPAFGEIGDTAMTAEVEIEMAANGLPTTFVPGRNLAFLVFAGALALRRGLSV 135

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G+C+TD +GYPDCR +TI+A   A++LG++  ++V TPLM+  K ETW LAQ++GG 
Sbjct: 136 VVGGMCQTDAAGYPDCRWETIKAQADALSLGIDPSLSVATPLMFRSKAETWALAQELGGD 195

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           DLV++I+E++HTCY G R+ R+ WGYGC  CPAC+ R +GW  ++E
Sbjct: 196 DLVSMIVEDTHTCYRGDREHRHPWGYGCGDCPACHERARGWATWQE 241


>gi|66044667|ref|YP_234508.1| ExsB [Pseudomonas syringae pv. syringae B728a]
 gi|302187147|ref|ZP_07263820.1| ExsB [Pseudomonas syringae pv. syringae 642]
 gi|75502945|sp|Q4ZWK2|QUEC_PSEU2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|63255374|gb|AAY36470.1| ExsB [Pseudomonas syringae pv. syringae B728a]
 gi|330968881|gb|EGH68947.1| ExsB [Pseudomonas syringae pv. aceris str. M302273PT]
 gi|330975317|gb|EGH75383.1| ExsB [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 229

 Score =  181 bits (459), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 70/247 (28%), Positives = 106/247 (42%), Gaps = 28/247 (11%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+++ K    A++L SGG DS+T ++ A        T+SFDYGQR++ EL+    V   +
Sbjct: 1   MSELTKTEKRAVILLSGGLDSATVVAMARAEGYVCYTMSFDYGQRHRAELDAAARVAGDL 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  K          L L  +G  + +  +  V     +      +VP RN +FL  A 
Sbjct: 61  GAVEHKVIG-------LNLNGIGGSALTDSSIAVPESPSEGIPVT-YVPARNTVFLSLAL 112

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWL 175
             A  LG  +I IGV   DYSGYPDCR + + + E   NL  +        T+  PL  L
Sbjct: 113 GWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQNL 172

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K +  K    +G      +    + +CY          G  C  C +C LR +G+    
Sbjct: 173 SKSDIVKAGTALG------VDYSLTVSCYQADD-----QGRACGKCDSCRLRAEGFTAAG 221

Query: 236 ----EKY 238
                +Y
Sbjct: 222 IADPTRY 228


>gi|303247445|ref|ZP_07333717.1| exsB protein [Desulfovibrio fructosovorans JJ]
 gi|302491141|gb|EFL51033.1| exsB protein [Desulfovibrio fructosovorans JJ]
          Length = 233

 Score =  181 bits (459), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 78/242 (32%), Positives = 113/242 (46%), Gaps = 27/242 (11%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      A++LFSGG DS+TCL+ A +       LSF YGQR++VEL+    V   +   
Sbjct: 1   MTTPEKKAVVLFSGGLDSTTCLAVAREEGFAPCALSFAYGQRHEVELQAAKRVAAAMNVA 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSL---TKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                        LPL  +G  + ++     K+  +   +  +P T+VP RN IFL  A 
Sbjct: 61  AHLVLP-------LPLGAIGGSALTADIAVPKDRDVAAMEAEIPVTYVPARNTIFLSMAL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM------ESHVTVHTPLMW 174
             A  LG  +I IGV   DYSGYPDCR   + A E   NL +         +++HTPL+ 
Sbjct: 114 GWAEVLGAQDIYIGVNALDYSGYPDCRPQFVAAFEAMANLAVKEAVEGHLRISIHTPLLH 173

Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           L K +  +L   +G      +    +H+CY          G  C  C +C LR+KG+ E 
Sbjct: 174 LTKADIVRLGTRLG------VDYGLTHSCYDPD-----PSGLACGRCDSCLLRKKGFAEA 222

Query: 235 KE 236
             
Sbjct: 223 GI 224


>gi|257487000|ref|ZP_05641041.1| exsB protein [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|289626506|ref|ZP_06459460.1| exsB protein [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|289650952|ref|ZP_06482295.1| exsB protein [Pseudomonas syringae pv. aesculi str. 2250]
 gi|298488199|ref|ZP_07006235.1| Queuosine Biosynthesis QueC ATPase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298157257|gb|EFH98341.1| Queuosine Biosynthesis QueC ATPase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|320323042|gb|EFW79131.1| exsB protein [Pseudomonas syringae pv. glycinea str. B076]
 gi|320329686|gb|EFW85675.1| exsB protein [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330868622|gb|EGH03331.1| exsB protein [Pseudomonas syringae pv. aesculi str. 0893_23]
 gi|330892250|gb|EGH24911.1| exsB protein [Pseudomonas syringae pv. mori str. 301020]
 gi|330988979|gb|EGH87082.1| exsB protein [Pseudomonas syringae pv. lachrymans str. M301315]
 gi|331009358|gb|EGH89414.1| exsB protein [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 229

 Score =  181 bits (459), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 69/247 (27%), Positives = 106/247 (42%), Gaps = 28/247 (11%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+++      A++L SGG DS+T ++ A        T+SFDYGQR++ EL+    V + +
Sbjct: 1   MSELTNTEKRAVILLSGGLDSATVVAMARAEGYACYTMSFDYGQRHRAELDAAARVARDL 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  K          L L  +G  + +  +  V     +      +VP RN +FL  A 
Sbjct: 61  GAVEHKVIG-------LNLNGIGGSALTDSSIAVPESPSEGIPIT-YVPARNTVFLSLAL 112

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWL 175
             A  LG  +I IGV   DYSGYPDCR + + + E   NL  +        T+  PL  L
Sbjct: 113 GWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQNL 172

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K +  K    +G      +    + +CY          G  C  C +C LR +G+    
Sbjct: 173 SKSDIVKAGAALG------VDYSLTVSCYQADD-----QGRACGKCDSCRLRAEGFTAAG 221

Query: 236 ----EKY 238
                +Y
Sbjct: 222 MADPTRY 228


>gi|163815378|ref|ZP_02206753.1| hypothetical protein COPEUT_01543 [Coprococcus eutactus ATCC 27759]
 gi|158449352|gb|EDP26347.1| hypothetical protein COPEUT_01543 [Coprococcus eutactus ATCC 27759]
          Length = 230

 Score =  181 bits (459), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 99/241 (41%), Positives = 151/241 (62%), Gaps = 25/241 (10%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +K    A+++FSGGQDS+TCL WAL ++ +V  +SFDYGQR+ +ELEC   +  K     
Sbjct: 9   LKNKDEAVVVFSGGQDSTTCLLWALKKYKKVYAVSFDYGQRHALELECAREIADKFG--- 65

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLT---KNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                   E HIL +++L  ++ +SLT     V     D   PN+FV GRN++FL F A 
Sbjct: 66  -------VEHHILDMSLLNQLAPNSLTRTDMKVDENAPDEGTPNSFVDGRNMVFLTFVAI 118

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            A + GI++I+ GV ++D+SGYPDCR   I+++ T +NL M+    + TPLMW+ K ETW
Sbjct: 119 FAKQRGISDIITGVSQSDFSGYPDCRDIFIKSLNTTLNLAMDYEFDIITPLMWIDKMETW 178

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG---WMEFKEKY 238
           K+A ++GG   +++I + + TCY G +      G GC  CP+C LR+KG   +M++KE++
Sbjct: 179 KMADELGG---LDVIRDMTLTCYNGIK------GEGCGHCPSCKLRKKGYDLYMKYKEEH 229

Query: 239 Q 239
           +
Sbjct: 230 K 230


>gi|167747131|ref|ZP_02419258.1| hypothetical protein ANACAC_01844 [Anaerostipes caccae DSM 14662]
 gi|167654091|gb|EDR98220.1| hypothetical protein ANACAC_01844 [Anaerostipes caccae DSM 14662]
          Length = 219

 Score =  181 bits (459), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 99/238 (41%), Positives = 141/238 (59%), Gaps = 22/238 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K   A+++FSGGQDS+TCL WA  +++ V  LSFDYGQ++  EL C   + KK     
Sbjct: 1   MSKPTKAVVVFSGGQDSTTCLFWAKKKYEEVIALSFDYGQKHSDELICAKEICKKYG--- 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLT---KNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                   E HIL +A+L  ++ +SLT     V  +  +   PN+FV GRN++FL FAA 
Sbjct: 58  -------VEHHILDMALLNQLAPNSLTRADIEVDKEAPETGTPNSFVDGRNMLFLTFAAV 110

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            A +  I  +V GV ++D+SGYPDCRH  I ++ET + L M+    V TPLMW+ K ETW
Sbjct: 111 FAKQRDIHVLVTGVSQSDFSGYPDCRHVFITSLETTLTLAMDYEFEVITPLMWIDKKETW 170

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           K+A D+G     ++I +E+ TCY G R      G GC  CPAC LR++G   +  + +
Sbjct: 171 KMADDLGVF---DVIRQETLTCYNGVR------GDGCGDCPACRLRRRGMEAYLSERK 219


>gi|229114878|ref|ZP_04244291.1| hypothetical protein bcere0017_11750 [Bacillus cereus Rock1-3]
 gi|228668570|gb|EEL23999.1| hypothetical protein bcere0017_11750 [Bacillus cereus Rock1-3]
          Length = 223

 Score =  181 bits (459), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 91/240 (37%), Positives = 153/240 (63%), Gaps = 22/240 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+++  K   A+++FSGGQDS+TCL WA+++F  VE ++F+Y QR+K+E++C + + K++
Sbjct: 1   MSEM--KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAVEIAKEL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                       +  +L +++L  ++ ++LT  ++ +  ++  LP+TFV GRN++FL FA
Sbjct: 59  G----------IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFA 108

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           A LA ++   +IV GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K +
Sbjct: 109 AVLAKQVEARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAD 168

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           TWKL+ ++G  + V    E++ TCY G        G GC  CPAC LR+ G   + ++ +
Sbjct: 169 TWKLSDELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 219


>gi|330896139|gb|EGH28360.1| ExsB [Pseudomonas syringae pv. japonica str. M301072PT]
          Length = 229

 Score =  181 bits (459), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 70/247 (28%), Positives = 106/247 (42%), Gaps = 28/247 (11%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+++ K    A++L SGG DS+T ++ A        T+SFDYGQR++ EL+    V   +
Sbjct: 1   MSELTKTEKRAVILLSGGLDSATVVAMARAEGYVCYTMSFDYGQRHRAELDAAARVAGDL 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  K          L L  +G  + +  +  V     +      +VP RN +FL  A 
Sbjct: 61  GAVEHKVIG-------LNLNGIGGSALTDSSIAVPESPSEGIPVT-YVPARNTVFLSLAL 112

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWL 175
             A  LG  +I IGV   DYSGYPDCR + + + E   NL  +        T+  PL  L
Sbjct: 113 GWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQNL 172

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K +  K    +G      +    + +CY          G  C  C +C LR +G+    
Sbjct: 173 SKSDIVKAGAALG------VDYSLTVSCYQADD-----QGRACGKCDSCRLRAEGFTAAG 221

Query: 236 ----EKY 238
                +Y
Sbjct: 222 IADPTRY 228


>gi|149179803|ref|ZP_01858308.1| possible aluminum resistance protein [Bacillus sp. SG-1]
 gi|148851995|gb|EDL66140.1| possible aluminum resistance protein [Bacillus sp. SG-1]
          Length = 220

 Score =  181 bits (459), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 94/228 (41%), Positives = 140/228 (61%), Gaps = 19/228 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   AL++FSGGQDS+TCL WA   F  VE ++F+YGQR+  EL+C   + +++      
Sbjct: 2   KNEKALVVFSGGQDSTTCLIWAKKEFKEVEAVTFNYGQRHSFELDCAREIAEELN----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   H+L +++L  +S S+LT++  +  ++  LP+TFVPGRN++F  FA  LA  +
Sbjct: 57  -----VRHHVLDMSLLNQLSPSALTRDEEITEKEGELPSTFVPGRNLLFFSFAGVLAKNI 111

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G  +IV G+CETD+SGYPDCR    ++    +NL ++    +HTPLMW+ K  TWK A D
Sbjct: 112 GAKHIVTGICETDFSGYPDCRDIFAKSFNVTLNLALDEGYVLHTPLMWMDKEATWKWADD 171

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           +G   ++  I E++ TCY G R      G GC +CP+C LR KG  ++
Sbjct: 172 MG---VLQYIREKTLTCYNGIR------GDGCGTCPSCKLRSKGLSDY 210


>gi|251798293|ref|YP_003013024.1| exsB protein [Paenibacillus sp. JDR-2]
 gi|247545919|gb|ACT02938.1| exsB protein [Paenibacillus sp. JDR-2]
          Length = 221

 Score =  181 bits (459), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 95/229 (41%), Positives = 142/229 (62%), Gaps = 20/229 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WAL+R++ VE ++F+YGQR+ +ELEC   + +++      
Sbjct: 2   KKGKAVVVFSGGQDSTTCLFWALERYEEVEAVTFNYGQRHALELECAAQIAEELG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                   H+L +++L  ++ ++LT+ ++ ++ Q+  LP TFV GRN++FL FAA LA +
Sbjct: 57  -----VRHHVLDMSLLNQLAPNALTRPDIEIEQQEGGLPTTFVDGRNLLFLSFAAVLAKQ 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G   IV GVCETD+SGYPDCR   I+++   +NL M+    + TPLMWL K ETW LA 
Sbjct: 112 IGARAIVTGVCETDFSGYPDCRDIFIKSLNVTLNLSMDYPFVIETPLMWLDKAETWGLAD 171

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            +G  + V     ++ TCY G          GC  CPAC LR +G   +
Sbjct: 172 QLGAFEYVR---TKTLTCYNG------VIADGCGECPACKLRSQGLNRY 211


>gi|330936707|gb|EGH40895.1| ExsB [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 229

 Score =  181 bits (458), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 70/247 (28%), Positives = 106/247 (42%), Gaps = 28/247 (11%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+++ K    A++L SGG DS+T ++ A        T+SFDYGQR++ EL+    V   +
Sbjct: 1   MSELTKTEKRAVILLSGGLDSATVVAMARAEGYVCYTMSFDYGQRHRAELDAAARVAGDL 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  K          L L  +G  + +  +  V     +      +VP RN +FL  A 
Sbjct: 61  GAVEHKVIG-------LNLNGIGGSALTDSSIAVPESPSEGIPVT-YVPARNTVFLSLAL 112

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWL 175
             A  LG  +I IGV   DYSGYPDCR + + + E   NL  +        T+  PL  L
Sbjct: 113 GWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQNL 172

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K +  K    +G      +    + +CY          G  C  C +C LR +G+    
Sbjct: 173 SKSDIVKAGTALG------VDYSLTVSCYQAD-----NQGRACGKCDSCRLRAEGFTAAG 221

Query: 236 ----EKY 238
                +Y
Sbjct: 222 IADPTRY 228


>gi|255525615|ref|ZP_05392549.1| exsB protein [Clostridium carboxidivorans P7]
 gi|296185502|ref|ZP_06853912.1| ExsB protein [Clostridium carboxidivorans P7]
 gi|255510705|gb|EET87011.1| exsB protein [Clostridium carboxidivorans P7]
 gi|296050336|gb|EFG89760.1| ExsB protein [Clostridium carboxidivorans P7]
          Length = 222

 Score =  181 bits (458), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 101/235 (42%), Positives = 142/235 (60%), Gaps = 22/235 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A+++FSGGQDS+TCL WA  +F  V  +SFDY Q++K+ELEC   + KK       
Sbjct: 2   NKEKAVVVFSGGQDSTTCLFWAKKKFKEVIAVSFDYNQKHKLELECAKSICKK------- 54

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                 E HIL L +L  ++ +SLT+    V  ++    LPN+FV GRN++FL F A  A
Sbjct: 55  ---YNVEHHILDLNLLNQLAPNSLTRQDIKVDKEVPSGGLPNSFVDGRNMLFLTFVAVFA 111

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            +  I NI+ GV ++D+SGYPDCR   I+++   +NL M+    ++TPLMW+ K ETWK+
Sbjct: 112 KQRDINNIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYQFDIYTPLMWINKAETWKM 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
           A D+   D+V     E+ TCY G +      G GC  CPAC LR+ G++EFK KY
Sbjct: 172 AYDLSVLDIVK---NETLTCYNGIK------GNGCGECPACRLRKNGYLEFKNKY 217


>gi|254166659|ref|ZP_04873513.1| exsB protein [Aciduliprofundum boonei T469]
 gi|254167513|ref|ZP_04874365.1| exsB protein [Aciduliprofundum boonei T469]
 gi|289596334|ref|YP_003483030.1| exsB protein [Aciduliprofundum boonei T469]
 gi|197623776|gb|EDY36339.1| exsB protein [Aciduliprofundum boonei T469]
 gi|197624269|gb|EDY36830.1| exsB protein [Aciduliprofundum boonei T469]
 gi|289534121|gb|ADD08468.1| exsB protein [Aciduliprofundum boonei T469]
          Length = 237

 Score =  181 bits (458), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 74/238 (31%), Positives = 110/238 (46%), Gaps = 30/238 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DSST L+ AL+    V  LSFDYGQR+  ELE    + +         K 
Sbjct: 2   KAVVLLSGGLDSSTVLAIALEMGYDVHALSFDYGQRHSRELESAKKIARYFNVPHKIIK- 60

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQ--DNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                  + L  +G  + +   +    +++  +  +P T+VP RN I L  A   A  + 
Sbjct: 61  -------IDLRQIGGSALTDNIEVPERQVEDIEKEIPITYVPARNTILLSLALGYAEVID 113

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWK 182
              I  G    DYSGYPDCR + + A E   NLG +  V      +  P++ + K E  K
Sbjct: 114 ADAIFYGANAIDYSGYPDCRPEYVEAFERVANLGTKRGVEGKPIKIIAPIIHMTKAEIIK 173

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
              ++G      +  E + +CY G++         C  C +C LR KG+ME    Y+D
Sbjct: 174 KGMELG------VPYELTWSCYRGEKK-------ACGKCDSCLLRLKGFMEAG--YED 216


>gi|291612994|ref|YP_003523151.1| exsB protein [Sideroxydans lithotrophicus ES-1]
 gi|291583106|gb|ADE10764.1| exsB protein [Sideroxydans lithotrophicus ES-1]
          Length = 225

 Score =  181 bits (458), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 68/242 (28%), Positives = 104/242 (42%), Gaps = 28/242 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T L+ A  +      LS DYGQR+  EL     V + +     +
Sbjct: 1   MTKRAVVLLSGGLDSATVLAMARTQGFECYALSVDYGQRHHAELAAAQRVAQSLGAREQR 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +       + L   G  + +     V  +   + +P T+VP RN I L  A   A  L
Sbjct: 61  VVN-------IDLTGFGGSALTDANIAVPEQ-AGSGIPITYVPARNTIMLSLALAWAEVL 112

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETW 181
              +I  GV   DYSGYPDCR + + A E   NL  ++ V      +H PL+ L K E  
Sbjct: 113 KAQDIFFGVNAVDYSGYPDCRPEYVAAFERMANLATQAAVEGKPLTLHAPLLHLSKAEII 172

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EK 237
           +    +G      +    + +CY    +     G  C  C +C LR++G+         +
Sbjct: 173 RQGVRLG------VDYGLTVSCYQADDE-----GRACGRCDSCRLRREGFAAAGVPDSTR 221

Query: 238 YQ 239
           Y+
Sbjct: 222 YR 223


>gi|206977560|ref|ZP_03238454.1| exsB protein [Bacillus cereus H3081.97]
 gi|217958916|ref|YP_002337464.1| exsB protein [Bacillus cereus AH187]
 gi|222095073|ref|YP_002529133.1| aluminum resistance protein [Bacillus cereus Q1]
 gi|254764306|sp|B7HK63|QUEC_BACC7 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764307|sp|B9IUT0|QUEC_BACCQ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|206744278|gb|EDZ55691.1| exsB protein [Bacillus cereus H3081.97]
 gi|217065877|gb|ACJ80127.1| exsB protein [Bacillus cereus AH187]
 gi|221239131|gb|ACM11841.1| possible aluminum resistance protein [Bacillus cereus Q1]
          Length = 220

 Score =  181 bits (458), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 92/234 (39%), Positives = 149/234 (63%), Gaps = 20/234 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WA+++F  VE ++F+Y QR+K+E++C   + K++      
Sbjct: 2   KKEKAVVVFSGGQDSTTCLFWAMEQFAEVEAVTFNYNQRHKLEIDCAAEIAKELG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 +  +L +++L  ++ ++LT  ++ +  ++  LP+TFV GRN++FL FAA LA +
Sbjct: 57  -----IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAKQ 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G  +IV GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K ETWKL+ 
Sbjct: 112 VGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLSD 171

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           ++G  + V    E++ TCY G        G GC  CPAC LR+ G   + ++ +
Sbjct: 172 ELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 216


>gi|229102039|ref|ZP_04232752.1| hypothetical protein bcere0019_12040 [Bacillus cereus Rock3-28]
 gi|228681426|gb|EEL35590.1| hypothetical protein bcere0019_12040 [Bacillus cereus Rock3-28]
          Length = 223

 Score =  181 bits (458), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 91/240 (37%), Positives = 153/240 (63%), Gaps = 22/240 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+++  K   A+++FSGGQDS+TCL WA+++F  VE ++F+Y QR+K+E++C + + K++
Sbjct: 1   MSEM--KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAVEIAKEL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                       +  +L +++L  ++ ++LT  ++ +  ++  LP+TFV GRN++FL FA
Sbjct: 59  G----------IKHTVLDMSLLNQLAPNALTRTDMEIIHEEGELPSTFVDGRNLLFLSFA 108

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           A LA ++   +IV GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K +
Sbjct: 109 AVLAKQVEARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAD 168

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           TWKL+ ++G  + V    E++ TCY G        G GC  CPAC LR+ G   + ++ +
Sbjct: 169 TWKLSDELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 219


>gi|20804095|emb|CAD31298.1| CONSERVED HYPOTHETICAL PROTEIN [Mesorhizobium loti R7A]
          Length = 245

 Score =  181 bits (458), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 122/232 (52%), Positives = 171/232 (73%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +   +AL+LFSGGQDS+TCL+WAL+ F+RVET+ FDYGQR+++EL+ R  +  +I   
Sbjct: 1   MQRDPGTALVLFSGGQDSTTCLAWALENFERVETIGFDYGQRHRIELDVRPYLLGRIRTD 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
            P W+  LGEDH++ +A+LG IS ++LT++V + +  N L NTFVPGRN++FL FAA +A
Sbjct: 61  FPAWRGRLGEDHMIDMAVLGQISDTALTRDVEVALNANGLTNTFVPGRNLLFLGFAAAIA 120

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           YR+G  ++VIGV ETD   YPDCR D ++A++ A+NLGME+H+ +HTPLM   K +TW L
Sbjct: 121 YRMGAKHLVIGVSETDRFSYPDCRDDAVKAMQLALNLGMETHLVIHTPLMRRDKAQTWAL 180

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           A  +GG+ LV LI E SHTCY G R+ R+ WG+GC +C  C LR  GW +F+
Sbjct: 181 AGWLGGEVLVKLICEGSHTCYSGDREHRHSWGFGCGTCIECNLRAAGWEQFR 232


>gi|83746168|ref|ZP_00943222.1| Queuosine biosynthesis protein QueC [Ralstonia solanacearum UW551]
 gi|207744073|ref|YP_002260465.1| hypothetical protein RSIPO_02259 [Ralstonia solanacearum IPO1609]
 gi|83727134|gb|EAP74258.1| Queuosine biosynthesis protein QueC [Ralstonia solanacearum UW551]
 gi|206595477|emb|CAQ62404.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
          Length = 224

 Score =  181 bits (458), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 65/242 (26%), Positives = 101/242 (41%), Gaps = 27/242 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T L+ A  +      LS  YGQR+  ELE    V   +  +  +
Sbjct: 1   MKKRAIVLLSGGLDSATVLAMANTQGFETYALSMRYGQRHSSELEAAKKVAAALGAVRHE 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D       L L   G  + +    +V        +P T+VP RN I L  A   A  +
Sbjct: 61  IVD-------LDLRRFGGSALTDDALDVPTTGVKEGIPITYVPARNTIMLSLALGWAEAV 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETW 181
           G  ++  G    DYSGYPDCR + + A ET  NL  +       + V+ P++ + K E  
Sbjct: 114 GARDLFFGANAVDYSGYPDCRPEFVAAYETLANLATKAGVEGDRIRVNAPIIAMTKAEII 173

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EK 237
           +    +G      +    + +CY          G  C  C +C +R+ G+         +
Sbjct: 174 QAGARLG------VDYSLTVSCYQADDA-----GRACGVCDSCRIRRAGFEAAGVPDPTR 222

Query: 238 YQ 239
           Y+
Sbjct: 223 YR 224


>gi|289674881|ref|ZP_06495771.1| ExsB [Pseudomonas syringae pv. syringae FF5]
          Length = 229

 Score =  181 bits (458), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 70/247 (28%), Positives = 106/247 (42%), Gaps = 28/247 (11%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+++ K    A++L SGG DS+T ++ A        T+SFDYGQR++ EL+    V   +
Sbjct: 1   MSELTKTEKRAVILLSGGLDSATVVAMARAEGYVCYTMSFDYGQRHRAELDAAARVAGDL 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  K          L L  +G  + +  +  V     +      +VP RN +FL  A 
Sbjct: 61  GAVEHKVIG-------LNLNGIGGSALTDSSIAVPESPSEGIPVT-YVPARNTVFLSLAL 112

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWL 175
             A  LG  +I IGV   DYSGYPDCR + + + E   NL  +        T+  PL  L
Sbjct: 113 GWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQNL 172

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K +  K    +G      +    + +CY          G  C  C +C LR +G+    
Sbjct: 173 SKSDIVKAGTALG------VDYSLTVSCYQADDH-----GRACGKCDSCRLRAEGFTAAG 221

Query: 236 ----EKY 238
                +Y
Sbjct: 222 IADPTRY 228


>gi|322805870|emb|CBZ03435.1| queuosine Biosynthesis QueC ATPase [Clostridium botulinum H04402
           065]
          Length = 219

 Score =  181 bits (458), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 98/235 (41%), Positives = 142/235 (60%), Gaps = 22/235 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A+++FSGGQDS+TCL WA  ++  V  +SFDY Q++K+EL+C   + KK       
Sbjct: 2   NKEKAIVVFSGGQDSTTCLFWAKKKYKEVIAVSFDYNQKHKLELDCAKDICKK------- 54

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                 E HIL L +L  ++ +SLT+    V        +PN+FV GRN++FL F A  A
Sbjct: 55  ---YNIEHHILDLNLLNQLAPNSLTRQDITVDKSAPKEGVPNSFVDGRNLLFLSFVAVFA 111

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            + GI  I+ GV ++D+SGYPDCR   I+++   +NL M+    + TPLMW+ K ETWK+
Sbjct: 112 KQKGINTIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYEFEIITPLMWINKAETWKM 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
           A D+G  D+V    EE+ TCY G +        GC  CPAC LR+KG++EF+++Y
Sbjct: 172 AYDLGVLDIVK---EETLTCYNGIK------ADGCGECPACKLRKKGYLEFEKEY 217


>gi|218896373|ref|YP_002444784.1| exsB protein [Bacillus cereus G9842]
 gi|254764303|sp|B7IN35|QUEC_BACC2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|218543833|gb|ACK96227.1| exsB protein [Bacillus cereus G9842]
          Length = 220

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 92/234 (39%), Positives = 149/234 (63%), Gaps = 20/234 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WA+++F  VE ++F+Y QR+K+E++C   + K++      
Sbjct: 2   KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAKIAKELG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 +  +L +++L  ++ ++LT  ++ +  ++  LP+TFV GRN++FL FAA LA +
Sbjct: 57  -----IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAKQ 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G  +IV GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K ETWKL+ 
Sbjct: 112 VGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLSD 171

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           ++G  + V    E++ TCY G        G GC  CPAC LR+ G   + ++ +
Sbjct: 172 ELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 216


>gi|300692234|ref|YP_003753229.1| queuosine biosynthesis protein [Ralstonia solanacearum PSI07]
 gi|299079294|emb|CBJ51966.1| queuosine biosynthesis protein [Ralstonia solanacearum PSI07]
          Length = 224

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 65/242 (26%), Positives = 101/242 (41%), Gaps = 27/242 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T L+ A  +      LS  YGQR+  ELE    V   +  +  +
Sbjct: 1   MKKRAIVLLSGGLDSATVLAMANAQGFETYALSMRYGQRHSSELEAAKKVAAALGAVRHE 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D       L L   G  + +     V        +P T+VP RN I L  A   A  +
Sbjct: 61  IVD-------LDLRRFGGSALTDDALEVPTTGVKEGIPITYVPARNTIMLSLALGWAEAV 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETW 181
           G  ++  G    DYSGYPDCR + + A ET  NL  +       + V+ P++ + K E  
Sbjct: 114 GARDLFFGANAVDYSGYPDCRPEFVAAYETLANLATKAGVEGDRIRVNAPIIAMTKAEII 173

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EK 237
           +    +G      +    + +CY    +     G  C  C +C +R+ G+         +
Sbjct: 174 QAGARLG------VDYSLTVSCYQADDE-----GRACGVCDSCRIRRAGFETAGVADPTR 222

Query: 238 YQ 239
           Y+
Sbjct: 223 YR 224


>gi|30019491|ref|NP_831122.1| aluminum resistance protein [Bacillus cereus ATCC 14579]
 gi|206967667|ref|ZP_03228623.1| exsB protein [Bacillus cereus AH1134]
 gi|296502021|ref|YP_003663721.1| aluminum resistance protein [Bacillus thuringiensis BMB171]
 gi|81435436|sp|Q81G69|QUEC_BACCR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|29895035|gb|AAP08323.1| Aluminum resistance protein [Bacillus cereus ATCC 14579]
 gi|206736587|gb|EDZ53734.1| exsB protein [Bacillus cereus AH1134]
 gi|296323073|gb|ADH06001.1| aluminum resistance protein [Bacillus thuringiensis BMB171]
 gi|326939064|gb|AEA14960.1| aluminum resistance protein [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 220

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 92/234 (39%), Positives = 149/234 (63%), Gaps = 20/234 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WA+++F  VE ++F+Y QR+K+E++C   + K++      
Sbjct: 2   KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAEIAKELG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 +  +L +++L  ++ ++LT  ++ +  ++  LP+TFV GRN++FL FAA LA +
Sbjct: 57  -----IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAKQ 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G  +IV GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K ETWKL+ 
Sbjct: 112 VGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLSD 171

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           ++G  + V    E++ TCY G        G GC  CPAC LR+ G   + ++ +
Sbjct: 172 ELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 216


>gi|73540502|ref|YP_295022.1| ExsB [Ralstonia eutropha JMP134]
 gi|110816249|sp|Q474K5|QUEC_RALEJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|72117915|gb|AAZ60178.1| ExsB [Ralstonia eutropha JMP134]
          Length = 226

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 67/243 (27%), Positives = 103/243 (42%), Gaps = 27/243 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T L+ A  +      LS  YGQR+  EL+    V   +  +  +
Sbjct: 1   MTKRAIVLLSGGLDSATVLAMAKAQGFETYALSMRYGQRHSSELDAAKQVASALGAVRHE 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D       L L   G  + +    +V      + +P T+VP RN I L  A   A  +
Sbjct: 61  IVD-------LDLRRFGGSALTDDKLDVPTGGASSGIPITYVPARNTIMLSLALGWAEAV 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETW 181
           G  ++  G    DYSGYPDCR + + A ET  NL  +         VH P++ + K E  
Sbjct: 114 GGRDLFFGANAVDYSGYPDCRPEYVAAYETLANLATKAGVEGDRFHVHAPIIDMTKAEII 173

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EK 237
           +    +G      +    + +CY    D     G  C  C +C +R+ G+         +
Sbjct: 174 RAGIRLG------VDYSMTVSCYKADDD-----GRACGVCDSCRIRRAGFEAAGVPDPTR 222

Query: 238 YQD 240
           YQ+
Sbjct: 223 YQN 225


>gi|303327392|ref|ZP_07357833.1| ExsB protein [Desulfovibrio sp. 3_1_syn3]
 gi|302862332|gb|EFL85265.1| ExsB protein [Desulfovibrio sp. 3_1_syn3]
          Length = 252

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 119/235 (50%), Positives = 164/235 (69%), Gaps = 1/235 (0%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   AL++FSGGQDS+TCL+W L RF+RV TL FDYGQR+ VEL CR  +R  + EL P 
Sbjct: 10  QQEQALVIFSGGQDSATCLAWTLSRFERVRTLGFDYGQRHNVELACRQRLRAALAELDPL 69

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD-NNLPNTFVPGRNIIFLVFAATLAYR 125
           W   LG D +L + I   ++ ++LT    +       LP TFVPGRN++F++ AA  AY 
Sbjct: 70  WASRLGPDTLLNVDIFRQLADTALTSEAPIAADGPGGLPTTFVPGRNLLFILHAAVWAYA 129

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
             I ++++GVC++D SGYPDCR D+I+A++ A+N GM+S   +HTPLMWL K   W+LA+
Sbjct: 130 KNIRHLILGVCQSDSSGYPDCRDDSIKAMQVALNCGMDSRFVLHTPLMWLSKRGAWELAE 189

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
            +GG  LV+LILEESHTCY G+R +RY+WGYGC  CPAC LR  G+  ++E  ++
Sbjct: 190 SLGGTALVDLILEESHTCYAGERGRRYDWGYGCGVCPACRLRASGYAAYREARKN 244


>gi|317486303|ref|ZP_07945135.1| ExsB protein [Bilophila wadsworthia 3_1_6]
 gi|316922473|gb|EFV43727.1| ExsB protein [Bilophila wadsworthia 3_1_6]
          Length = 239

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 120/228 (52%), Positives = 160/228 (70%), Gaps = 3/228 (1%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI---VELMPK 66
           SAL++FSGGQDS+TCL WAL+RFDRV T+ FDYGQR+ VE+ECR  V   +     L   
Sbjct: 8   SALVIFSGGQDSATCLGWALNRFDRVFTVGFDYGQRHHVEMECRRNVLNAVRSDASLPAS 67

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           W   LGED +L L +   I  +++T ++ +   +  +PNTFVPGRN++FL  AA LA+R 
Sbjct: 68  WAARLGEDTLLSLGLFNQIGETAMTSDMEIAFNEQGIPNTFVPGRNLVFLTAAAALAWRK 127

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI ++V+GVCETD+SGYPDCR DT++A++ A+NLGM++   VHTPLMWL K  TW LA+ 
Sbjct: 128 GIRHLVMGVCETDFSGYPDCRDDTVKAMQVALNLGMDARFVVHTPLMWLDKARTWTLAEQ 187

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            GG   V  +   +HTCY+G R + + WGYGC  CPAC LR+ GW E+
Sbjct: 188 EGGAPFVECVRTVTHTCYIGDRGELHPWGYGCGQCPACKLREHGWKEY 235


>gi|229002866|ref|ZP_04160742.1| hypothetical protein bmyco0003_57960 [Bacillus mycoides Rock3-17]
 gi|229008540|ref|ZP_04165967.1| hypothetical protein bmyco0002_53200 [Bacillus mycoides Rock1-4]
 gi|228752735|gb|EEM02336.1| hypothetical protein bmyco0002_53200 [Bacillus mycoides Rock1-4]
 gi|228758391|gb|EEM07562.1| hypothetical protein bmyco0003_57960 [Bacillus mycoides Rock3-17]
          Length = 221

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 90/236 (38%), Positives = 147/236 (62%), Gaps = 20/236 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +     A+++FSGGQDS+TCL WA+ +F  VE ++F+Y QR+K+E++C   +  ++    
Sbjct: 1   MYSNDKAIVVFSGGQDSTTCLFWAMQQFAEVEAVTFNYNQRHKLEIDCAAEIANELG--- 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                   +  +L +++L  ++ ++LT  ++ +  ++  LP+TFV GRN++FL FAA LA
Sbjct: 58  -------IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLA 110

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            ++G  +IV GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K ETWK+
Sbjct: 111 KQVGAHHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKI 170

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           A ++G  + V    E++ TCY G        G GC  CPAC LR+ G   + ++ +
Sbjct: 171 ADELGAFEFVR---EKTLTCYNGI------IGNGCGECPACQLRKAGLDTYLQERE 217


>gi|42780532|ref|NP_977779.1| exsB protein [Bacillus cereus ATCC 10987]
 gi|47566228|ref|ZP_00237256.1| exsB protein [Bacillus cereus G9241]
 gi|49479999|ref|YP_035565.1| aluminum resistance protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|52143996|ref|YP_082831.1| aluminum resistance protein [Bacillus cereus E33L]
 gi|196040637|ref|ZP_03107936.1| protein ExsB [Bacillus cereus NVH0597-99]
 gi|196046480|ref|ZP_03113705.1| exsB protein [Bacillus cereus 03BB108]
 gi|225863303|ref|YP_002748681.1| exsB protein [Bacillus cereus 03BB102]
 gi|301052979|ref|YP_003791190.1| putative aluminum resistance protein [Bacillus anthracis CI]
 gi|81396767|sp|Q6HLK6|QUEC_BACHK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|81569836|sp|Q73BG0|QUEC_BACC1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|81688847|sp|Q63E31|QUEC_BACCZ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|189039061|sp|A0RBG1|QUEC_BACAH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764304|sp|C1EM49|QUEC_BACC3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|42736452|gb|AAS40387.1| exsB protein [Bacillus cereus ATCC 10987]
 gi|47556781|gb|EAL15112.1| exsB protein [Bacillus cereus G9241]
 gi|49331555|gb|AAT62201.1| possible aluminum resistance protein [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|51977465|gb|AAU19015.1| possible aluminum resistance protein [Bacillus cereus E33L]
 gi|196022664|gb|EDX61346.1| exsB protein [Bacillus cereus 03BB108]
 gi|196028427|gb|EDX67035.1| protein ExsB [Bacillus cereus NVH0597-99]
 gi|225785866|gb|ACO26083.1| protein ExsB [Bacillus cereus 03BB102]
 gi|300375148|gb|ADK04052.1| possible aluminum resistance protein [Bacillus cereus biovar
           anthracis str. CI]
 gi|324325457|gb|ADY20717.1| aluminum resistance protein [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 220

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 92/234 (39%), Positives = 149/234 (63%), Gaps = 20/234 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WA+++F  VE ++F+Y QR+K+E++C   + K++      
Sbjct: 2   KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAEIAKELG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 +  +L +++L  ++ ++LT  ++ +  ++  LP+TFV GRN++FL FAA LA +
Sbjct: 57  -----IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAKQ 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G  +IV GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K ETWKL+ 
Sbjct: 112 VGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLSD 171

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           ++G  + V    E++ TCY G        G GC  CPAC LR+ G   + ++ +
Sbjct: 172 ELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 216


>gi|152974868|ref|YP_001374385.1| exsB protein [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|189038895|sp|A7GMN2|QUEC_BACCN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|152023620|gb|ABS21390.1| exsB protein [Bacillus cytotoxicus NVH 391-98]
          Length = 220

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 93/234 (39%), Positives = 148/234 (63%), Gaps = 20/234 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WA+ +F  VE ++F+Y QR+K+E+EC   + K++      
Sbjct: 2   KKEKAVVVFSGGQDSTTCLFWAMQQFAEVEAVTFNYNQRHKLEIECAANIAKELG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 +  +L +++L  ++ ++LT  ++ +  ++  LP+TFV GRN++FL FAA LA +
Sbjct: 57  -----IKHTVLDMSLLNQLAPNALTRTDIDITHEEGELPSTFVEGRNLLFLSFAAVLAKQ 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G  +IV GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K +TWKL+ 
Sbjct: 112 VGARHIVTGVCETDFSGYPDCRDAFVKSLNVTLNLSMDYPFVIHTPLMWIDKADTWKLSD 171

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           ++G  D V    E++ TCY G        G GC  CPAC LR+ G   + ++ +
Sbjct: 172 ELGAFDFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 216


>gi|113868782|ref|YP_727271.1| PP-loop superfamily ATPase [Ralstonia eutropha H16]
 gi|123032775|sp|Q0K7W8|QUEC_RALEH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|113527558|emb|CAJ93903.1| Predicted PP-loop superfamily ATPase [Ralstonia eutropha H16]
          Length = 227

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 68/242 (28%), Positives = 100/242 (41%), Gaps = 27/242 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T L+ A  +      LS  YGQR+  ELE    V   +     +
Sbjct: 1   MTKRAIVLLSGGLDSATVLAMARAQGFETYALSMRYGQRHSSELEAARRVAAALGATRHE 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D       L L   G  + +     V      + +P T+VP RN I L  A   A  +
Sbjct: 61  IID-------LDLRRFGGSALTDDALAVPTDGASDGIPVTYVPARNTIMLSLALGWAEAV 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETW 181
           G  ++  G    DYSGYPDCR + + A ET  NL  +         VH P++ + K E  
Sbjct: 114 GGRDLFFGANAVDYSGYPDCRPEYVAAYETLANLATKAGVEGDRFRVHAPIIDMTKGEII 173

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EK 237
           +    +G      +    + +CY    D     G  C  C +C +R+ G+         +
Sbjct: 174 RAGIALG------VDYSLTVSCYQADDD-----GRACGVCDSCRIRRAGFEAAGVPDPTR 222

Query: 238 YQ 239
           YQ
Sbjct: 223 YQ 224


>gi|30261440|ref|NP_843817.1| exsB protein [Bacillus anthracis str. Ames]
 gi|47526629|ref|YP_017978.1| ExsB family transcriptional regulator [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49184274|ref|YP_027526.1| exsB protein [Bacillus anthracis str. Sterne]
 gi|165870370|ref|ZP_02215025.1| exsB protein [Bacillus anthracis str. A0488]
 gi|167634318|ref|ZP_02392639.1| exsB protein [Bacillus anthracis str. A0442]
 gi|167639318|ref|ZP_02397590.1| exsB protein [Bacillus anthracis str. A0193]
 gi|170686660|ref|ZP_02877880.1| exsB protein [Bacillus anthracis str. A0465]
 gi|170706321|ref|ZP_02896782.1| exsB protein [Bacillus anthracis str. A0389]
 gi|177651440|ref|ZP_02934229.1| exsB protein [Bacillus anthracis str. A0174]
 gi|190568037|ref|ZP_03020947.1| exsB protein [Bacillus anthracis Tsiankovskii-I]
 gi|196035303|ref|ZP_03102708.1| exsB protein [Bacillus cereus W]
 gi|218902547|ref|YP_002450381.1| exsB protein [Bacillus cereus AH820]
 gi|227815813|ref|YP_002815822.1| exsB protein [Bacillus anthracis str. CDC 684]
 gi|229603244|ref|YP_002865853.1| exsB protein [Bacillus anthracis str. A0248]
 gi|254682497|ref|ZP_05146358.1| exsB protein [Bacillus anthracis str. CNEVA-9066]
 gi|254726160|ref|ZP_05187942.1| exsB protein [Bacillus anthracis str. A1055]
 gi|254733913|ref|ZP_05191627.1| exsB protein [Bacillus anthracis str. Western North America
           USA6153]
 gi|254740397|ref|ZP_05198088.1| exsB protein [Bacillus anthracis str. Kruger B]
 gi|254753787|ref|ZP_05205822.1| exsB protein [Bacillus anthracis str. Vollum]
 gi|254758884|ref|ZP_05210911.1| exsB protein [Bacillus anthracis str. Australia 94]
 gi|81582971|sp|Q81TC7|QUEC_BACAN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764300|sp|C3P4F6|QUEC_BACAA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764301|sp|C3LAL0|QUEC_BACAC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764302|sp|B7JFS4|QUEC_BACC0 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|30255294|gb|AAP25303.1| protein ExsB [Bacillus anthracis str. Ames]
 gi|47501777|gb|AAT30453.1| exsB protein [Bacillus anthracis str. 'Ames Ancestor']
 gi|49178201|gb|AAT53577.1| exsB protein [Bacillus anthracis str. Sterne]
 gi|164713865|gb|EDR19387.1| exsB protein [Bacillus anthracis str. A0488]
 gi|167512757|gb|EDR88131.1| exsB protein [Bacillus anthracis str. A0193]
 gi|167530206|gb|EDR92932.1| exsB protein [Bacillus anthracis str. A0442]
 gi|170128855|gb|EDS97721.1| exsB protein [Bacillus anthracis str. A0389]
 gi|170669183|gb|EDT19926.1| exsB protein [Bacillus anthracis str. A0465]
 gi|172082718|gb|EDT67781.1| exsB protein [Bacillus anthracis str. A0174]
 gi|190560771|gb|EDV14746.1| exsB protein [Bacillus anthracis Tsiankovskii-I]
 gi|195991980|gb|EDX55943.1| exsB protein [Bacillus cereus W]
 gi|218536698|gb|ACK89096.1| exsB protein [Bacillus cereus AH820]
 gi|227003186|gb|ACP12929.1| protein ExsB [Bacillus anthracis str. CDC 684]
 gi|229267652|gb|ACQ49289.1| exsB protein [Bacillus anthracis str. A0248]
          Length = 220

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 92/234 (39%), Positives = 150/234 (64%), Gaps = 20/234 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WA+++F  VE ++F+Y QR+K+E++C + + K++      
Sbjct: 2   KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAVEIAKELG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 +  +L +++L  ++ ++LT  ++ +  ++  LP+TFV GRN++FL FAA LA +
Sbjct: 57  -----IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAKQ 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G  +IV GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K ETWKL+ 
Sbjct: 112 VGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLSD 171

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           ++G  + V    E++ TCY G        G GC  CPAC LR+ G   + ++ +
Sbjct: 172 ELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 216


>gi|229084430|ref|ZP_04216710.1| hypothetical protein bcere0022_10700 [Bacillus cereus Rock3-44]
 gi|228698970|gb|EEL51675.1| hypothetical protein bcere0022_10700 [Bacillus cereus Rock3-44]
          Length = 220

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 93/234 (39%), Positives = 148/234 (63%), Gaps = 20/234 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WA+ +F  VE ++F+Y QR+K+E++C   + K++      
Sbjct: 2   KKEKAVVVFSGGQDSTTCLFWAMQQFAEVEAVTFNYNQRHKLEIDCAADIAKELG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 +  +L +++L  ++ ++LT  ++ +  ++  LP+TFV GRN++FL FAA LA +
Sbjct: 57  -----IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVEGRNLLFLSFAAVLAKQ 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G  +IV GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K ETWKL+ 
Sbjct: 112 VGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLSD 171

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           ++G  D V    E++ TCY G        G GC  CPAC LR+ G   + ++ +
Sbjct: 172 ELGAFDFVR---EKTLTCYNGI------IGDGCGECPACKLRKAGLDTYLQERE 216


>gi|163939247|ref|YP_001644131.1| exsB protein [Bacillus weihenstephanensis KBAB4]
 gi|254764308|sp|A9VKR8|QUEC_BACWK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|163861444|gb|ABY42503.1| exsB protein [Bacillus weihenstephanensis KBAB4]
          Length = 220

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 93/234 (39%), Positives = 150/234 (64%), Gaps = 20/234 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WA+ +F+ VE ++F+Y QR+K+E++C + + K++      
Sbjct: 2   KKEKAVVVFSGGQDSTTCLFWAIQQFEEVEAVTFNYNQRHKLEIDCAVEIAKELG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 +  IL +++L  ++ ++LT  ++ +  ++  LP+TFV GRN++FL FAA LA +
Sbjct: 57  -----IKHTILDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAKQ 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G  +IV GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K ETWKL+ 
Sbjct: 112 VGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLSD 171

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           ++G  + V    E++ TCY G        G GC  CPAC LR+ G   + ++ +
Sbjct: 172 ELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 216


>gi|15896861|ref|NP_350210.1| PP-loop superfamily ATPase [Clostridium acetobutylicum ATCC 824]
 gi|81529172|sp|Q97D53|QUEC_CLOAB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|15026727|gb|AAK81550.1|AE007858_11 PP-loop superfamily ATPase, confers aluminum resistance
           [Clostridium acetobutylicum ATCC 824]
 gi|325511035|gb|ADZ22671.1| PP-loop superfamily ATPase, confers aluminum resistance
           [Clostridium acetobutylicum EA 2018]
          Length = 222

 Score =  180 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 105/240 (43%), Positives = 143/240 (59%), Gaps = 22/240 (9%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +I      AL++FSGGQDS+TCL WA  R+  V  +SFDY Q++K+ELEC   + KK   
Sbjct: 2   EISINKEKALVVFSGGQDSTTCLFWAKKRYKEVVAVSFDYNQKHKLELECAKDICKK--- 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLT---KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                     E HIL + +L  ++ +SLT     V      +  PNTFV GRN++FL FA
Sbjct: 59  -------HGVEHHILDMKLLNQLAPNSLTRADMKVDEDAPKDGPPNTFVDGRNLLFLSFA 111

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           A  A + GI NI+ GV ++D+SGYPDCR   I+++   +NL M+    + TPLMW+ K E
Sbjct: 112 AVFAKQRGINNIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYQFVLITPLMWIDKAE 171

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           TWKLA D+G  D+V     E+ TCY G +      G GC  CPAC LR+ G++EFK  Y+
Sbjct: 172 TWKLADDLGVLDIVK---NETLTCYNGIK------GNGCGECPACKLRKNGYVEFKRLYK 222


>gi|295093083|emb|CBK82174.1| preQ(0) biosynthesis protein QueC [Coprococcus sp. ART55/1]
          Length = 225

 Score =  180 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 98/239 (41%), Positives = 147/239 (61%), Gaps = 23/239 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +K    A+++FSGGQDS+TCL WAL ++ +V  +SFDYGQR+ +ELEC   +  K     
Sbjct: 4   LKNKDEAVVVFSGGQDSTTCLLWALKKYKKVYAVSFDYGQRHALELECAKEIADKFG--- 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLT---KNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                   E HIL + +L  ++ +SLT     V     D   PN+FV GRN++FL F A 
Sbjct: 61  -------VEHHILDMGLLNQLAPNSLTRTDMKVDENAPDEGTPNSFVDGRNMVFLTFVAI 113

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            A + GI++I+ GV ++D+SGYPDCR   I+++ T +NL M+    + TPLMW+ K ETW
Sbjct: 114 FAKQRGISDIITGVSQSDFSGYPDCRDIFIKSLNTTLNLAMDYEFDIITPLMWIDKMETW 173

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
           K+A ++GG   +++I + + TCY G +      G GC  CP+C LR+KG+  +  KY++
Sbjct: 174 KMADELGG---LDVIRDMTLTCYNGIK------GEGCGHCPSCKLRKKGYDLY-MKYKE 222


>gi|218234594|ref|YP_002366123.1| exsB protein [Bacillus cereus B4264]
 gi|254764305|sp|B7HH96|QUEC_BACC4 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|218162551|gb|ACK62543.1| protein ExsB [Bacillus cereus B4264]
          Length = 220

 Score =  180 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 92/234 (39%), Positives = 149/234 (63%), Gaps = 20/234 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WA+++F  VE ++F+Y QR+K+E++C   + K++      
Sbjct: 2   KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAEIAKELG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 +  +L +++L  ++ ++LT  ++ +  ++  LP+TFV GRN++FL FAA LA +
Sbjct: 57  -----IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAKQ 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G  +IV GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K ETWKL+ 
Sbjct: 112 VGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWINKAETWKLSD 171

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           ++G  + V    E++ TCY G        G GC  CPAC LR+ G   + ++ +
Sbjct: 172 ELGAFEFVR---EKTLTCYNGI------IGDGCGECPACQLRKAGLDTYLQERE 216


>gi|71735695|ref|YP_275903.1| exsB protein [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|110816243|sp|Q48FD4|QUEC_PSE14 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|71556248|gb|AAZ35459.1| exsB protein [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 229

 Score =  180 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 69/247 (27%), Positives = 106/247 (42%), Gaps = 28/247 (11%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+++      A++L SGG DS+T ++ A        T+SFDYGQR++ EL+    V + +
Sbjct: 1   MSELTNTEKRAVILLSGGLDSATVVAMARAEGYACYTMSFDYGQRHRAELDAAARVARDL 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  K          L L  +G  + +  +  V     +      +VP RN +FL  A 
Sbjct: 61  GAVEHKVIG-------LNLNGIGGSALTDSSIAVPESPSEGIPIT-YVPARNTVFLSLAL 112

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWL 175
             A  LG  +I IGV   DYSGYPDCR + + + E   NL  +        T+  PL  L
Sbjct: 113 GWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQNL 172

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K +  K    +G      +    + +CY          G  C  C +C LR +G+    
Sbjct: 173 SKSDIVKAGAALG------VDYSLTVSCYQADD-----QGRACGKCDSCRLRTEGFTAAG 221

Query: 236 ----EKY 238
                +Y
Sbjct: 222 MADPTRY 228


>gi|194290404|ref|YP_002006311.1| queuosine biosynthesis protein quec homolog [Cupriavidus
           taiwanensis LMG 19424]
 gi|254764327|sp|B3R5T4|QUEC_CUPTR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|193224239|emb|CAQ70248.1| queuosine biosynthesis protein QueC putative homolog [Cupriavidus
           taiwanensis LMG 19424]
          Length = 227

 Score =  180 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 68/242 (28%), Positives = 100/242 (41%), Gaps = 27/242 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T L+ A  +      LS  YGQR+  ELE    V   +  +  +
Sbjct: 1   MTQRAIVLLSGGLDSATVLAMARAQGFETYALSMRYGQRHSSELEAAKRVAAALGAVRHE 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D       L L   G  + +     V        +P T+VP RN I L  A   A  +
Sbjct: 61  IVD-------LDLRRFGGSALTDDALEVPTDGASGGIPVTYVPARNTIMLSLALGWAEAV 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETW 181
           G  ++  G    DYSGYPDCR + + A ET  NL  +         VH P++ + K E  
Sbjct: 114 GGRDLFFGANAVDYSGYPDCRPEYVAAYETLANLATKAGVEGDRFRVHAPIIDMTKGEII 173

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EK 237
           +    +G      +    + +CY    D     G  C  C +C +R+ G+         +
Sbjct: 174 RAGIALG------VDYSLTVSCYQADDD-----GRACGVCDSCRIRRAGFEAAGVPDPTR 222

Query: 238 YQ 239
           YQ
Sbjct: 223 YQ 224


>gi|187927783|ref|YP_001898270.1| exsB protein [Ralstonia pickettii 12J]
 gi|254764370|sp|B2U7H6|QUEC_RALPJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|187724673|gb|ACD25838.1| exsB protein [Ralstonia pickettii 12J]
          Length = 224

 Score =  180 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 65/241 (26%), Positives = 100/241 (41%), Gaps = 27/241 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T L+ A         LS  YGQR+  ELE    V   +  +  +
Sbjct: 1   MKKRAIVLLSGGLDSATVLAMANADGFETYALSMRYGQRHSSELEAAKKVAAALGAVRHE 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D       L L   G  + +    +V      + +P T+VP RN I L  A   A  +
Sbjct: 61  IVD-------LDLRKFGGSALTDDALDVPTDGVQSGIPITYVPARNTIMLSLALGWAEAV 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETW 181
           G  ++  G    DYSGYPDCR + + A ET  NL  +       + V+ P++ + K E  
Sbjct: 114 GARDLFFGANAVDYSGYPDCRPEYVAAYETLANLATKAGVEGERIRVNAPIINMTKAEII 173

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EK 237
           +    +G      +    + +CY          G  C  C +C +R+ G+         +
Sbjct: 174 QAGVRLG------VDYGLTVSCYKADDA-----GRACGVCDSCRIRKAGFEAAGVPDPTR 222

Query: 238 Y 238
           Y
Sbjct: 223 Y 223


>gi|17545457|ref|NP_518859.1| signal peptide protein [Ralstonia solanacearum GMI1000]
 gi|81506162|sp|Q8Y1F2|QUEC_RALSO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|17427749|emb|CAD14268.1| hypothetical signal peptide protein [Ralstonia solanacearum
           GMI1000]
          Length = 224

 Score =  180 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 66/242 (27%), Positives = 102/242 (42%), Gaps = 27/242 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T L+ A  +      LS  YGQR+  ELE    V   +  +  +
Sbjct: 1   MKKRAIVLLSGGLDSATVLAMANAQGFETYALSMRYGQRHSSELEAAKKVAAALGAVRHE 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D       L L   G  + +     V        +P T+VP RN I L  A   A  +
Sbjct: 61  IVD-------LDLRRFGGSALTDDALEVPTTGVQEGIPITYVPARNTIMLSLALGWAEAV 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETW 181
           G  ++  G    DYSGYPDCR + + A ET  NL  +      H+ V+ P++ + K E  
Sbjct: 114 GARDLFFGANAVDYSGYPDCRPEYVAAYETLANLATKAGVEGDHIRVNAPIIAMTKAEII 173

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF----KEK 237
           +    +G      +    + +CY    +     G  C  C +C +R+ G+         +
Sbjct: 174 QAGARLG------VDYSLTVSCYQADDE-----GRACGVCDSCRIRRAGFEAAAVPDPTR 222

Query: 238 YQ 239
           Y+
Sbjct: 223 YR 224


>gi|168182490|ref|ZP_02617154.1| protein ExsB [Clostridium botulinum Bf]
 gi|237794900|ref|YP_002862452.1| exsB protein [Clostridium botulinum Ba4 str. 657]
 gi|259551497|sp|C3KVW4|QUEC_CLOB6 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|182674375|gb|EDT86336.1| protein ExsB [Clostridium botulinum Bf]
 gi|229261676|gb|ACQ52709.1| exsB protein [Clostridium botulinum Ba4 str. 657]
          Length = 219

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 98/235 (41%), Positives = 141/235 (60%), Gaps = 22/235 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A+++FSGGQDS+TCL WA  ++  V  +SFDY Q++K+ELEC   + KK       
Sbjct: 2   NKEKAIVVFSGGQDSTTCLFWAKKKYKEVIAVSFDYNQKHKLELECAKDICKK------- 54

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                 E  IL L +L  ++ +SLT+    V        +PN+FV GRN++FL F A  A
Sbjct: 55  ---YNIEHKILDLNLLNQLAPNSLTRQDITVDKSAPKEGVPNSFVDGRNLLFLSFVAVFA 111

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            + GI  I+ GV ++D+SGYPDCR   I+++   +NL M+    + TPLMW+ K ETWK+
Sbjct: 112 KQRGINAIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYEFEILTPLMWINKAETWKM 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
           A D+G  D+V    EE+ TCY G +        GC  CPAC LR+KG++EF+++Y
Sbjct: 172 AYDLGVLDIVK---EETLTCYNGIK------ADGCGECPACKLRKKGYLEFEKEY 217


>gi|241662344|ref|YP_002980704.1| exsB protein [Ralstonia pickettii 12D]
 gi|309780843|ref|ZP_07675584.1| ExsB protein [Ralstonia sp. 5_7_47FAA]
 gi|240864371|gb|ACS62032.1| exsB protein [Ralstonia pickettii 12D]
 gi|308920525|gb|EFP66181.1| ExsB protein [Ralstonia sp. 5_7_47FAA]
          Length = 224

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 65/241 (26%), Positives = 99/241 (41%), Gaps = 27/241 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T L+ A         LS  YGQR+  ELE    V   +  +  +
Sbjct: 1   MKKRAIVLLSGGLDSATVLAMANADGFETYALSMRYGQRHSSELEAAKKVAAALGAVRHE 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D       L L   G  + +    +V        +P T+VP RN I L  A   A  +
Sbjct: 61  IVD-------LDLRKFGGSALTDDALDVPTDGAQTGIPITYVPARNTIMLSLALGWAEAV 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETW 181
           G  ++  G    DYSGYPDCR + + A ET  NL  +       + V+ P++ + K E  
Sbjct: 114 GARDLFFGANAVDYSGYPDCRPEYVAAYETLANLATKAGVEGERIRVNAPIIDMTKAEII 173

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EK 237
           +    +G      +    + +CY          G  C  C +C +R+ G+         +
Sbjct: 174 QAGVRLG------VDYGLTVSCYKADDA-----GRACGVCDSCRIRKAGFEAAGVPDPTR 222

Query: 238 Y 238
           Y
Sbjct: 223 Y 223


>gi|315645293|ref|ZP_07898418.1| possible aluminum resistance protein [Paenibacillus vortex V453]
 gi|315279335|gb|EFU42641.1| possible aluminum resistance protein [Paenibacillus vortex V453]
          Length = 223

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 94/229 (41%), Positives = 144/229 (62%), Gaps = 20/229 (8%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + KK   A+++FSGGQDS+TCL WA+ +FD VE ++F+YGQR+ +E+EC   +  ++   
Sbjct: 1   MDKKNKKAVVVFSGGQDSTTCLFWAMKQFDEVEAVTFNYGQRHALEIECANQIADELG-- 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                    +  +L +++LG ++ ++LT  +V +   D   P+TFV GRN +FL FAA  
Sbjct: 59  --------VKWTLLDMSLLGQLTQNALTRDDVEIVHNDGEFPSTFVEGRNHLFLSFAAVF 110

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A  +G  +IV GVCETD+SGYPDCR D ++++   +NL M+ +  +HTPLMW+ K ETW+
Sbjct: 111 AKGVGARHIVTGVCETDFSGYPDCRDDFVKSLNVTLNLAMDHNFIIHTPLMWINKAETWE 170

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
           +A  +G  + V    +++ TCY G        G GC +CPAC LR+ G 
Sbjct: 171 MADQLGAFEFVR---KKTLTCYNG------VIGDGCGNCPACQLRKAGL 210


>gi|327481487|gb|AEA84797.1| ExsB protein [Pseudomonas stutzeri DSM 4166]
          Length = 224

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 73/247 (29%), Positives = 108/247 (43%), Gaps = 33/247 (13%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN+       A++L SGG DS+T ++ A D      T+SFDYGQR++ EL+    V K++
Sbjct: 1   MNE-----KKAVILLSGGLDSATVVAMARDEGYACYTMSFDYGQRHRAELQAAERVAKQL 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  K          L L  +G  + +  + +V     +      +VP RN +FL  A 
Sbjct: 56  AVVEHKVIG-------LNLNGIGGSALTDTSIDVPEAPSEGIPVT-YVPARNTVFLSLAL 107

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWL 175
             A  LG  +I IGV   DYSGYPDCR + + A E   NL  +         +  PL  L
Sbjct: 108 GWAEVLGARDIFIGVNAVDYSGYPDCRPEFVAAFERMANLATKAGVEGQGFRIQAPLQNL 167

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K +  +    +G      +    + +CY    D     G  C  C +C LR  G+ E  
Sbjct: 168 SKAQIVREGSRLG------VDYAMTVSCYQADDD-----GRACGKCDSCRLRSAGFAEAG 216

Query: 236 ----EKY 238
                +Y
Sbjct: 217 LADPTRY 223


>gi|213969195|ref|ZP_03397334.1| exsB protein [Pseudomonas syringae pv. tomato T1]
 gi|301384810|ref|ZP_07233228.1| exsB protein [Pseudomonas syringae pv. tomato Max13]
 gi|302130600|ref|ZP_07256590.1| exsB protein [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213926193|gb|EEB59749.1| exsB protein [Pseudomonas syringae pv. tomato T1]
          Length = 229

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 70/247 (28%), Positives = 107/247 (43%), Gaps = 28/247 (11%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+++      A++L SGG DS+T ++ A        T+SFDYGQR++ EL+    V + +
Sbjct: 1   MSELTNTEKRAVILLSGGLDSATVVAMARAEGYACYTMSFDYGQRHRAELDAAARVARDL 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  K          L L  +G  + +  +  V     +      +VP RN +FL  A 
Sbjct: 61  GAVEHKVIG-------LNLNGIGGSALTDSSIAVPESPSEGIPVT-YVPARNTVFLSLAL 112

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWL 175
             A  LG  +I IGV   DYSGYPDCR + + + E   NL  +        T+  PL  L
Sbjct: 113 GWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQNL 172

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW---- 231
            K +  K    +G      +    + +CY          G  C  C +C LR +G+    
Sbjct: 173 SKSDIVKAGTALG------VDYALTVSCYQADD-----QGRACGKCDSCRLRAEGFTASG 221

Query: 232 MEFKEKY 238
           M    +Y
Sbjct: 222 MADPTRY 228


>gi|78224267|ref|YP_386014.1| ExsB [Geobacter metallireducens GS-15]
 gi|110816228|sp|Q39R35|QUEC_GEOMG RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|78195522|gb|ABB33289.1| preQ(0) biosynthesis protein QueC [Geobacter metallireducens GS-15]
          Length = 237

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 76/237 (32%), Positives = 109/237 (45%), Gaps = 29/237 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L+SGG DS+TCL+ A         +SF YGQR+ VELE      + +  +   
Sbjct: 1   MHKKAVVLYSGGLDSTTCLAIARAEGYEPYAMSFSYGQRHSVELEQAKRNARPMGAV--- 57

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT--FVPGRNIIFLVFAATLAY 124
                  DH++       +  S+LT ++A+  +         +VP RN +FL FA   A 
Sbjct: 58  -------DHLVVEFDYRQVGGSALTSDIAVPKEGVGSDIPVTYVPARNTVFLSFALGWAE 110

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES------HVTVHTPLMWLKKY 178
            LG  +I IGV   DYSGYPDCR + I A E   NL  ++         +HTPL+ L K 
Sbjct: 111 VLGAFDIFIGVNALDYSGYPDCRPEYIAAFEAMANLATKAGVEGKGRFRIHTPLIHLTKA 170

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           E  +    +G      +    +H+CY          G  C  C +C LR KG+ E  
Sbjct: 171 EIIRKGLSLG------VDYGRTHSCYDP-----TPEGLACGLCDSCRLRLKGFAEAG 216


>gi|228995353|ref|ZP_04155038.1| hypothetical protein bpmyx0001_59560 [Bacillus pseudomycoides DSM
           12442]
 gi|228764395|gb|EEM13258.1| hypothetical protein bpmyx0001_59560 [Bacillus pseudomycoides DSM
           12442]
          Length = 221

 Score =  179 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 90/236 (38%), Positives = 147/236 (62%), Gaps = 20/236 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +     A+++FSGGQDS+TCL WA+ +F  VE ++F+Y QR+K+E++C   +  ++    
Sbjct: 1   MYSNDKAIVVFSGGQDSTTCLFWAMQQFAEVEAVTFNYNQRHKLEIDCAAEIANELG--- 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                   +  +L +++L  ++ ++LT  ++ +  ++  LP+TFV GRN++FL FAA LA
Sbjct: 58  -------IKHTVLDMSLLNQLAPNALTRTDMEITHEECELPSTFVDGRNLLFLSFAAVLA 110

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            ++G  +IV GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K ETWK+
Sbjct: 111 KQVGAHHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKI 170

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           A ++G  + V    E++ TCY G        G GC  CPAC LR+ G   + ++ +
Sbjct: 171 ADELGAFEFVR---EKTLTCYNGI------IGNGCGECPACQLRKAGLDTYLQERE 217


>gi|320546948|ref|ZP_08041249.1| transcription regulator ExsB [Streptococcus equinus ATCC 9812]
 gi|320448350|gb|EFW89092.1| transcription regulator ExsB [Streptococcus equinus ATCC 9812]
          Length = 217

 Score =  179 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 103/235 (43%), Positives = 154/235 (65%), Gaps = 20/235 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WAL  ++ VET++F+YGQR+ +E+E    +          
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWALKHYEHVETVTFNYGQRHSLEIEVAKQIA--------- 52

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +   ++H+L +++LG ++ ++LT+++ ++  D+++PNTFV GRN +FL FAA LA RL
Sbjct: 53  -AEQGVKNHLLDMSLLGQLTENALTRDIEIENPDDDVPNTFVDGRNHLFLSFAAVLAKRL 111

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GIT+I+ GVCETD+SGYPDCR   ++++   +NL M+ +  + TPLMWL K ETW+LA  
Sbjct: 112 GITDIITGVCETDFSGYPDCRDAFVKSLNVTLNLAMDYNFVIQTPLMWLDKSETWELADK 171

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY-QD 240
           +G  D V    E + TCY G +      G GC  CP+C LRQ G  ++  +  QD
Sbjct: 172 LGKFDYVR---ENTLTCYNGIK------GSGCGECPSCKLRQAGLEKYLARRGQD 217


>gi|189039055|sp|A4VN94|QUEC_PSEU5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
          Length = 224

 Score =  179 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 73/247 (29%), Positives = 108/247 (43%), Gaps = 33/247 (13%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN+       A++L SGG DS+T ++ A D      T+SFDYGQR++ EL+    V K++
Sbjct: 1   MNE-----KKAVILLSGGLDSATVVAMARDEGYACYTMSFDYGQRHRAELQAAERVAKQL 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  K          L L  +G  + +  + +V     +      +VP RN +FL  A 
Sbjct: 56  AVVEHKVIG-------LNLNGIGGSALTDTSIDVPEAPSEGIPVT-YVPARNTVFLSLAL 107

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWL 175
             A  LG  +I IGV   DYSGYPDCR + + A E   NL  +         +  PL  L
Sbjct: 108 GWAEVLGARDIFIGVNAVDYSGYPDCRPEFVAAFERMANLATKAGVEGQGFRIQAPLQNL 167

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K +  +    +G      +    + +CY    D     G  C  C +C LR  G+ E  
Sbjct: 168 SKAQIVRKGSRLG------VDYAMTVSCYQADDD-----GRACGKCDSCRLRSAGFAEAG 216

Query: 236 ----EKY 238
                +Y
Sbjct: 217 LADPTRY 223


>gi|90022170|ref|YP_527997.1| ExsB protein [Saccharophagus degradans 2-40]
 gi|110816257|sp|Q21HP4|QUEC_SACD2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|89951770|gb|ABD81785.1| ExsB [Saccharophagus degradans 2-40]
          Length = 225

 Score =  179 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 75/240 (31%), Positives = 105/240 (43%), Gaps = 28/240 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A++L SGG DS+T L+ A        TLSFDYGQR++VELE    V  K+     K 
Sbjct: 3   NKKAVILVSGGLDSTTALAIAQSEGYECYTLSFDYGQRHRVELEAAQRVSDKMHVAQHKV 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    L L  +G  + +     V     +      +VP RN +FL  A   A  L 
Sbjct: 63  VQ-------LDLKSIGGSALTDDDIAVPEDGPEGIPVT-YVPARNTVFLSIALGWAEVLN 114

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWK 182
              I IGV   DYSGYPDCR + I A +    L  +  V      + TPL+ + K E  +
Sbjct: 115 AEAIFIGVNAVDYSGYPDCRPEYIAAFQKLAMLATKVGVEGKPLQIKTPLIDMTKAEIVQ 174

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKY 238
           L   +G      +    + +CY    D     G  C  C +C LR+KG+ + +     +Y
Sbjct: 175 LGMRLG------VDYSATVSCYQANVD-----GEACGRCDSCRLRRKGFEDAQMEDPTRY 223


>gi|94311604|ref|YP_584814.1| ExsB [Cupriavidus metallidurans CH34]
 gi|110816250|sp|Q1LJY1|QUEC_RALME RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|93355456|gb|ABF09545.1| Queuosine biosynthesis protein queC [Cupriavidus metallidurans
           CH34]
          Length = 227

 Score =  179 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 68/242 (28%), Positives = 99/242 (40%), Gaps = 27/242 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T L+ A         LS  YGQR+  ELE    V  ++     +
Sbjct: 1   MTKRAIVLLSGGLDSATVLAMANAAGFETYALSMRYGQRHSSELEAAKRVAAELGAKRHE 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D       L L   G  + +    +V        +P T+VP RN I L  A   A  +
Sbjct: 61  IID-------LDLRRFGGSALTDDALDVPTDGAAGGIPITYVPARNTIMLSLALGWAEAI 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETW 181
           G  ++  G    DYSGYPDCR + + A ET  NL  +         VH P++ + K E  
Sbjct: 114 GGRDLFFGANAVDYSGYPDCRPEYVAAYETLANLATKAGVEGDRFHVHAPIIDMTKAEII 173

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EK 237
                +G      +    + +CY    D     G  C  C +C +R+ G+         +
Sbjct: 174 LAGVKLG------VDYGLTVSCYKADDD-----GRACGVCDSCRIRRAGFEAAGVPDPTR 222

Query: 238 YQ 239
           YQ
Sbjct: 223 YQ 224


>gi|293376552|ref|ZP_06622780.1| protein ExsB [Turicibacter sanguinis PC909]
 gi|325839386|ref|ZP_08166825.1| protein ExsB [Turicibacter sp. HGF1]
 gi|292644778|gb|EFF62860.1| protein ExsB [Turicibacter sanguinis PC909]
 gi|325490506|gb|EGC92822.1| protein ExsB [Turicibacter sp. HGF1]
          Length = 219

 Score =  179 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 97/232 (41%), Positives = 142/232 (61%), Gaps = 21/232 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+L+FSGGQDS+TCL WAL+ F  V  ++FDYGQR+ +ELEC   + +++      
Sbjct: 2   KQDKAVLVFSGGQDSTTCLYWALETFKEVIAVTFDYGQRHHLELECAKAICQELG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKI--QDNNLPNTFVPGRNIIFLVFAATLAY 124
                 E H+L +++L  ++ ++LT++       ++  LP+TFVPGRN++FL FA  LA 
Sbjct: 57  -----VEHHVLDMSLLNQLAPNALTRDEIKIELGEEGQLPSTFVPGRNLLFLSFAGVLAK 111

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G  +I+ GVCETD+SGYPDCR   I+++   +NL M+    +HTPLMWL K +TW+LA
Sbjct: 112 VKGAKHIITGVCETDFSGYPDCRDVFIKSLNVTLNLSMDDDFVIHTPLMWLNKAQTWELA 171

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
             +G  +    I E++ TCY G        G GC  CPAC LR++G   +  
Sbjct: 172 DKLGKFE---YIREKTLTCYNGI------IGDGCGECPACVLRRRGLESYLT 214


>gi|310639675|ref|YP_003944433.1| atpase, confers aluminum resistance [Paenibacillus polymyxa SC2]
 gi|309244625|gb|ADO54192.1| Putative ATPase, confers aluminum resistance [Paenibacillus
           polymyxa SC2]
          Length = 219

 Score =  179 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 97/233 (41%), Positives = 145/233 (62%), Gaps = 21/233 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               AL++FSGGQDS+TCL WAL  +D V+T+SF YGQR+K+ELEC   + K++      
Sbjct: 1   MNKKALVVFSGGQDSTTCLLWALKEYDEVQTVSFQYGQRHKLELECASEIAKELN----- 55

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 + H+L L +L  ++ ++LT+         +  LPNTFV GRN++FL FAA LA 
Sbjct: 56  -----VKHHVLDLNLLNQLAPNALTREDIEIEAGSEGALPNTFVDGRNMLFLSFAAILAK 110

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           +LG  +I+ GVC+TD+SGYPDCR   ++++   +NL M+ +  +HTPLMWL K +TW+LA
Sbjct: 111 QLGYYHIITGVCQTDFSGYPDCRDVFVKSLNVTLNLSMDYNFVIHTPLMWLNKKQTWELA 170

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
             +G    ++ +  ++ TCY G        G GC  CPAC LR+ G  ++ ++
Sbjct: 171 DQLGH---LDFVRTKTLTCYNGI------IGDGCGECPACLLRRAGLEQYLQE 214


>gi|331016449|gb|EGH96505.1| exsB protein [Pseudomonas syringae pv. lachrymans str. M302278PT]
          Length = 229

 Score =  179 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 70/247 (28%), Positives = 107/247 (43%), Gaps = 28/247 (11%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+++      A++L SGG DS+T ++ A        T+SFDYGQR++ EL+    V + +
Sbjct: 1   MSELTNTEKRAVILLSGGLDSATVVAMARAEGYACYTMSFDYGQRHRAELDAAARVARDL 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  K          L L  +G  + +  +  V     +      +VP RN +FL  A 
Sbjct: 61  GAVEHKVIG-------LNLNGIGGSALTDSSIAVPESPSEGIPVT-YVPARNTVFLSLAL 112

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWL 175
             A  LG  +I IGV   DYSGYPDCR + + + E   NL  +        T+  PL  L
Sbjct: 113 GWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQNL 172

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW---- 231
            K +  K    +G      +    + +CY          G  C  C +C LR +G+    
Sbjct: 173 SKSDIVKAGIALG------VDYALTVSCYQADD-----QGRACGKCDSCRLRAEGFTASG 221

Query: 232 MEFKEKY 238
           M    +Y
Sbjct: 222 MADPTRY 228


>gi|167768060|ref|ZP_02440113.1| hypothetical protein CLOSS21_02604 [Clostridium sp. SS2/1]
 gi|167710389|gb|EDS20968.1| hypothetical protein CLOSS21_02604 [Clostridium sp. SS2/1]
          Length = 221

 Score =  179 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 99/239 (41%), Positives = 139/239 (58%), Gaps = 23/239 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K   A+++FSGGQDS+TCL WA  ++D V  LSF+YGQR+  ELEC   + K      
Sbjct: 1   MAKPNKAVVVFSGGQDSTTCLFWAKKKYDEVIALSFNYGQRHSKELECAKKICK------ 54

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLT---KNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
               +   E HIL + +L  ++ +SLT     V  +  +   PN+FV GRN++FL FAA 
Sbjct: 55  ----EHGVEHHILDMGLLNQLAPNSLTRVDMEVDHEAPEEGTPNSFVDGRNMLFLTFAAV 110

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            A +  I  +V GV ++D+SGYPDCRH  I ++ET + L M+    V TPLMW+ K +TW
Sbjct: 111 FAKQRDIHVLVTGVSQSDFSGYPDCRHVFISSLETTLTLAMDYEFEVITPLMWIDKKQTW 170

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
           ++A  +G  D+V     E+ TCY G        G GC  CPAC LR+ G  E+  K +D
Sbjct: 171 EMADKLGVFDIVK---NETLTCYNG------VMGDGCGECPACKLRRHGLEEY-LKVRD 219


>gi|256823061|ref|YP_003147024.1| exsB protein [Kangiella koreensis DSM 16069]
 gi|256796600|gb|ACV27256.1| exsB protein [Kangiella koreensis DSM 16069]
          Length = 224

 Score =  179 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 68/241 (28%), Positives = 110/241 (45%), Gaps = 27/241 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T L+ A  +      +SF+YGQR+  EL     + + +      
Sbjct: 1   MQKRAVVLLSGGLDSTTALAMAKSQGYDCYAMSFNYGQRSLAELNAAKKIAQSLDAKEHI 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +       L ++ +G  + +  + +V  +  +  +P T+VP RN +FL  A   A  L
Sbjct: 61  VVN-------LDMSQIGGSALTDHSIDVPTEGLEEGIPVTYVPARNTVFLSIALGWAEVL 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETW 181
              +I IGV   DYSGYPDCR + I+A ET  NL  ++ V      +  PL+ L K +  
Sbjct: 114 KADHIFIGVNAVDYSGYPDCRPEFIKAFETMANLATKAGVEGQKLTIEAPLINLTKAQII 173

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM----EFKEK 237
                +G      +   ++ +CY    D     G  C  C +C LR++G+         +
Sbjct: 174 AEGMTLG------VDYSQTVSCYKATDD-----GKACGVCDSCRLRKQGFESQGFADPTR 222

Query: 238 Y 238
           Y
Sbjct: 223 Y 223


>gi|317498352|ref|ZP_07956648.1| exsB protein [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316894357|gb|EFV16543.1| exsB protein [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 221

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 99/239 (41%), Positives = 139/239 (58%), Gaps = 23/239 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K   A+++FSGGQDS+TCL WA  ++D V  LSF+YGQR+  ELEC   + K      
Sbjct: 1   MAKPNKAVVVFSGGQDSTTCLFWAKKKYDEVIALSFNYGQRHSKELECAKKICK------ 54

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLT---KNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
               +   E HIL + +L  ++ +SLT     V  +  +   PN+FV GRN++FL FAA 
Sbjct: 55  ----EHGVEHHILDMGLLNQLAPNSLTRVDMEVDHEAPEEGTPNSFVDGRNMLFLTFAAV 110

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            A +  I  +V GV ++D+SGYPDCRH  I ++ET + L M+    V TPLMW+ K +TW
Sbjct: 111 FAKQRDIHVLVTGVSQSDFSGYPDCRHVFISSLETTLTLAMDYEFEVITPLMWIDKKQTW 170

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
           ++A  +G  D+V     E+ TCY G        G GC  CPAC LR+ G  E+  K +D
Sbjct: 171 EMADKLGVFDIVR---NETLTCYNG------VMGDGCGECPACKLRRHGLEEY-LKVRD 219


>gi|187779779|ref|ZP_02996252.1| hypothetical protein CLOSPO_03375 [Clostridium sporogenes ATCC
           15579]
 gi|187773404|gb|EDU37206.1| hypothetical protein CLOSPO_03375 [Clostridium sporogenes ATCC
           15579]
          Length = 219

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 97/235 (41%), Positives = 140/235 (59%), Gaps = 22/235 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A+++FSGGQDS+TCL WA  ++  V  +SFDY Q++K+ELE    + KK       
Sbjct: 2   NKEKAIVVFSGGQDSTTCLFWAKKKYKEVIAVSFDYNQKHKLELEFAKDICKK------- 54

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                 E  IL L +L  ++ +SLT+    V        +PN+FV GRN++FL F A  A
Sbjct: 55  ---HNIEHKILDLNLLNQLAPNSLTRQDITVDKSAPKEGVPNSFVDGRNLLFLSFVAVFA 111

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            + GI  I+ GV ++D+SGYPDCR   I+++   +NL M+    + TPLMW+ K ETWK+
Sbjct: 112 KQRGINAIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYEFEILTPLMWINKAETWKM 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
           A D+G  D+V    EE+ TCY G +        GC  CPAC LR+KG++EF+++Y
Sbjct: 172 AYDLGVLDIVK---EETLTCYNGIK------ADGCGECPACKLRKKGYLEFEKEY 217


>gi|148379524|ref|YP_001254065.1| hypothetical protein CBO1557 [Clostridium botulinum A str. ATCC
           3502]
 gi|153933891|ref|YP_001383901.1| exsB protein [Clostridium botulinum A str. ATCC 19397]
 gi|153936103|ref|YP_001387449.1| exsB protein [Clostridium botulinum A str. Hall]
 gi|189038905|sp|A7FU68|QUEC_CLOB1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|189038907|sp|A5I232|QUEC_CLOBH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|148289008|emb|CAL83097.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
           3502]
 gi|152929935|gb|ABS35435.1| exsB protein [Clostridium botulinum A str. ATCC 19397]
 gi|152932017|gb|ABS37516.1| exsB protein [Clostridium botulinum A str. Hall]
          Length = 219

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 98/235 (41%), Positives = 141/235 (60%), Gaps = 22/235 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A+++FSGGQDS+TCL WA  ++  V  +SFDY Q++K+EL+C   + KK       
Sbjct: 2   NKEKAIVVFSGGQDSTTCLFWAKKKYKEVIAVSFDYNQKHKLELDCAKDICKK------- 54

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                 E HIL L +L  ++ +SLT+    V        +PN+FV GRN++FL F A  A
Sbjct: 55  ---YNIEHHILDLNLLNQLAPNSLTRQDITVDKSAPKEGVPNSFVDGRNLLFLSFVAVFA 111

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            + GI  I+ GV ++D+SGYPDCR   I+++   +NL M+    + TPLMW+ K ETWK+
Sbjct: 112 KQKGINTIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYEFEIITPLMWINKAETWKM 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
           A D+G  D+V    EE+ TCY G +        GC  CPAC LR+KG+ EF+++Y
Sbjct: 172 AYDLGVLDIVK---EETLTCYNGIK------ADGCGECPACKLRKKGYWEFEKEY 217


>gi|291561059|emb|CBL39859.1| preQ(0) biosynthesis protein QueC [butyrate-producing bacterium
           SSC/2]
          Length = 221

 Score =  178 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 97/233 (41%), Positives = 136/233 (58%), Gaps = 22/233 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K   A+++FSGGQDS+TCL WA  ++D V  LSF+YGQR+  ELEC   + K      
Sbjct: 1   MAKPNKAVVVFSGGQDSTTCLFWAKKKYDEVIALSFNYGQRHSKELECAKKICK------ 54

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLT---KNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
               +   E HIL + +L  ++ +SLT     V  +  +   PN+FV GRN++FL FAA 
Sbjct: 55  ----EHGVEHHILDMGLLNQLAPNSLTRVDMEVDHEAPEEGTPNSFVDGRNMLFLTFAAV 110

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            A +  I  +V GV ++D+SGYPDCRH  I ++ET + L M+    V TPLMW+ K +TW
Sbjct: 111 FAKQRDIHVLVTGVSQSDFSGYPDCRHVFISSLETTLTLAMDYEFEVITPLMWIDKKQTW 170

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           ++A  +G  D+V     E+ TCY G        G GC  CPAC LR+ G  E+
Sbjct: 171 EMADKLGVFDIVK---NETLTCYNG------VMGDGCGECPACKLRRHGLEEY 214


>gi|16081996|ref|NP_394411.1| transcription regulator (exsB) related protein [Thermoplasma
           acidophilum DSM 1728]
 gi|74543780|sp|Q9HJL6|QUEC_THEAC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|10640266|emb|CAC12080.1| transcription regulator (exsB) related protein [Thermoplasma
           acidophilum]
          Length = 238

 Score =  178 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 72/237 (30%), Positives = 112/237 (47%), Gaps = 27/237 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   A++L SGG DSST L++A+     V  +SFDYGQR+  E+     + K        
Sbjct: 2   ERKKAVVLLSGGLDSSTVLAYAISLGYEVHAISFDYGQRHSREMNSSEELAKYYGVDRKI 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAY 124
                     + L  +G  + +   +  +  ++     +P T+VP RN IFL  AA  A 
Sbjct: 62  VH--------VDLRSIGKSALTDDIEVPSRDLESIPEEIPVTYVPARNTIFLSIAAAYAE 113

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM----ESHVTVHTPLMWLKKYET 180
            +G T+I IG    DYSGYPDCR +   A+E A+ LG        + ++ PL +L K + 
Sbjct: 114 SIGSTDIFIGANAIDYSGYPDCRPEYFNAMEKALTLGTEIGLRKGMHINVPLQYLTKADI 173

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            ++   +G      +  E++ +CY G           C  C +C LR KG+ME   +
Sbjct: 174 IRMGLKLG------VPYEKTWSCYKGGEK-------ACGECDSCLLRLKGFMEAGSE 217


>gi|153939170|ref|YP_001390902.1| ExsB protein [Clostridium botulinum F str. Langeland]
 gi|189038908|sp|A7GDP2|QUEC_CLOBL RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|152935066|gb|ABS40564.1| ExsB protein [Clostridium botulinum F str. Langeland]
 gi|295318964|gb|ADF99341.1| ExsB protein [Clostridium botulinum F str. 230613]
          Length = 219

 Score =  178 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 100/235 (42%), Positives = 141/235 (60%), Gaps = 23/235 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A+++FSGGQDS+TCL WA  ++  V  +SFDY Q++K+EL+C   + KK       
Sbjct: 2   NKEKAIVVFSGGQDSTTCLFWAKKKYKEVIAVSFDYNQKHKLELDCAKDICKK------- 54

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                 E HIL L +L  ++ +SLT+    V        +PN+FV GRN++FL F A  A
Sbjct: 55  ---YNIEHHILDLNLLNQLAPNSLTRQDITVDKSAPKEGVPNSFVDGRNLLFLSFVAVFA 111

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            + GI  I+ GV ++D+SGYPDCR   I+++   +NL M+    + TPLMW+ K ETWK+
Sbjct: 112 KQKGINTIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYEFEIITPLMWINKAETWKM 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
           A D+G  D+V    EE+ TCY G +        GC  CPAC LR+KG++EF EKY
Sbjct: 172 AYDLGVLDIVK---EETLTCYNGIK------ADGCGECPACKLRKKGYLEF-EKY 216


>gi|302392166|ref|YP_003827986.1| preQ(0) biosynthesis protein QueC [Acetohalobium arabaticum DSM
           5501]
 gi|302204243|gb|ADL12921.1| preQ(0) biosynthesis protein QueC [Acetohalobium arabaticum DSM
           5501]
          Length = 223

 Score =  178 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 77/242 (31%), Positives = 114/242 (47%), Gaps = 35/242 (14%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++LFSGG DS+T L  A  +  +V  LSF YGQ +  ELE    +  ++        
Sbjct: 2   KKAVVLFSGGLDSTTALYLAKSKGYQVYALSFKYGQSHSRELEAAKRIADQVG------- 54

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                +H++    L     S+LT         + +   +P T+VP RN+IFL +AA+ A 
Sbjct: 55  ---VAEHVVVETSLSAWGGSALTDQEMDIPQGEKEREEIPTTYVPARNMIFLSYAASYAE 111

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES------HVTVHTPLMWLKKY 178
            +G  +I IGV E DYSGY DCR + I A+E AIN G          + +  P + L K 
Sbjct: 112 AVGAHDIFIGVSEVDYSGYVDCRQEFIDAMEEAINQGTVCGAEEDNPIKIQAPFINLTKA 171

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
           E  +L  ++G      +    + +CY G+          C +C +C LR K + E    Y
Sbjct: 172 EEIELGMELG------VDYSLTWSCYRGEE-------LACGNCDSCMLRLKAFEEAG--Y 216

Query: 239 QD 240
            D
Sbjct: 217 DD 218


>gi|206889348|ref|YP_002248069.1| ExsB protein [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206741286|gb|ACI20343.1| ExsB protein [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 224

 Score =  178 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 80/235 (34%), Positives = 111/235 (47%), Gaps = 25/235 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DSST L  A         LSFDYGQR+K+E+E    V K I        
Sbjct: 2   KKAVILLSGGIDSSTTLIIAKSEGFECYALSFDYGQRHKIEIEAAKKVAKHIG------- 54

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQD-NNLPNTFVPGRNIIFLVFAATLAYRLG 127
               ++H++    L  I  S+LT  + +  ++   +P T+VP RN IFL F    A  L 
Sbjct: 55  ---VKEHLIVSFDLRKIGGSALTSKMEIPKEEIEGIPITYVPARNTIFLSFGLAWAEVLQ 111

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPLMWLKKYETW 181
             NI IG    DYSGYPDCR + ++A E   NL  +  V       ++ PL++L K E  
Sbjct: 112 CPNIFIGANIVDYSGYPDCRPEYLQAFERMANLATKISVEGTLKFKINAPLLYLTKSEII 171

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           K   ++G      L    + +CY  + D        C  CP+C  R KG+ E   
Sbjct: 172 KKGIELG------LDYSLTWSCYDPQGDPENPS--PCLKCPSCIYRLKGFKEAGI 218


>gi|226314168|ref|YP_002774064.1| queuosine biosynthesis protein [Brevibacillus brevis NBRC 100599]
 gi|226097118|dbj|BAH45560.1| queuosine biosynthesis protein [Brevibacillus brevis NBRC 100599]
          Length = 223

 Score =  178 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 95/231 (41%), Positives = 145/231 (62%), Gaps = 20/231 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K   A+++FSGGQDS+TCL WA ++F  VETL+FDYGQR+K+E+EC   +  ++    
Sbjct: 1   MMKKEKAVVVFSGGQDSTTCLFWAKEQFGEVETLTFDYGQRHKLEIECAQQIAAELG--- 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                   ++ +L +++L  ++ ++LT  ++ +  ++  LP+TFV GRN++FL FA   A
Sbjct: 58  -------VKNSVLDMSLLNQLAPNALTRTDIDITQEEGQLPSTFVDGRNLLFLSFAGVFA 110

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            + G  +++ GVCETD+SGYPDCR   I+++   +NL M+    +HTPLMWL K +TWKL
Sbjct: 111 KQRGARHLITGVCETDFSGYPDCRDAFIKSLNVTLNLSMDYPFVIHTPLMWLNKAQTWKL 170

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           A D+G       I E + TCY G +      G GC  CPAC+LR+ G   +
Sbjct: 171 ADDLGAFT---YIRENTLTCYNGIK------GDGCGECPACHLRKAGLDTY 212


>gi|119896704|ref|YP_931917.1| ExsB protein [Azoarcus sp. BH72]
 gi|189038894|sp|A1K2H5|QUEC_AZOSB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|119669117|emb|CAL93030.1| conserved hypothetical ExsB protein [Azoarcus sp. BH72]
          Length = 228

 Score =  178 bits (451), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 74/244 (30%), Positives = 105/244 (43%), Gaps = 27/244 (11%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +   P A++L SGG DS+TCL+ A D       LS  YGQR+  EL     V   +    
Sbjct: 1   MTDLPRAVVLLSGGLDSATCLAIARDMGLETYALSVAYGQRHAAELTASRRVAHALGARE 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            +          + L   G  + +     V        +P T+VP RN + L  A   A 
Sbjct: 61  HRVA-------SVSLGEFGGSALTDPAIAVPEDAAPGGIPVTYVPARNTVMLSMALAWAE 113

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYE 179
            LG  +I +GV   DYSGYPDCR   I+A ET  NL  ++ V      +H PL+ L K +
Sbjct: 114 VLGARHIFVGVNAVDYSGYPDCRPAFIQAFETMANLATKAGVEGHPTTIHAPLIDLSKAD 173

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK---- 235
             +    +G      +    + +CY    D     G  C  C AC LR++G+        
Sbjct: 174 IIRRGVALG------VDYGLTVSCYQADDD-----GRACGRCDACRLRREGFAAAGIADP 222

Query: 236 EKYQ 239
            +YQ
Sbjct: 223 TRYQ 226


>gi|146283134|ref|YP_001173287.1| ExsB protein [Pseudomonas stutzeri A1501]
 gi|145571339|gb|ABP80445.1| ExsB protein [Pseudomonas stutzeri A1501]
          Length = 241

 Score =  178 bits (451), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 73/247 (29%), Positives = 108/247 (43%), Gaps = 33/247 (13%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN+       A++L SGG DS+T ++ A D      T+SFDYGQR++ EL+    V K++
Sbjct: 18  MNE-----KKAVILLSGGLDSATVVAMARDEGYACYTMSFDYGQRHRAELQAAERVAKQL 72

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  K          L L  +G  + +  + +V     +      +VP RN +FL  A 
Sbjct: 73  AVVEHKVIG-------LNLNGIGGSALTDTSIDVPEAPSEGIPVT-YVPARNTVFLSLAL 124

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWL 175
             A  LG  +I IGV   DYSGYPDCR + + A E   NL  +         +  PL  L
Sbjct: 125 GWAEVLGARDIFIGVNAVDYSGYPDCRPEFVAAFERMANLATKAGVEGQGFRIQAPLQNL 184

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K +  +    +G      +    + +CY    D     G  C  C +C LR  G+ E  
Sbjct: 185 SKAQIVRKGSRLG------VDYAMTVSCYQADDD-----GRACGKCDSCRLRSAGFAEAG 233

Query: 236 ----EKY 238
                +Y
Sbjct: 234 LADPTRY 240


>gi|71909651|ref|YP_287238.1| ExsB [Dechloromonas aromatica RCB]
 gi|110816224|sp|Q478G3|QUEC_DECAR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|71849272|gb|AAZ48768.1| preQ(0) biosynthesis protein QueC [Dechloromonas aromatica RCB]
          Length = 225

 Score =  178 bits (450), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 73/234 (31%), Positives = 103/234 (44%), Gaps = 23/234 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+TCL+ A  +      LSF+YGQR+  EL     V K +     +
Sbjct: 1   MMKKAVVLLSGGLDSATCLAIARSQGFESYCLSFNYGQRHCAELVAADRVVKALGAAEHR 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +         LA  G  + +     V  +     +P T+VP RN I L  A   A  L
Sbjct: 61  VLNFG-------LAQFGGSALTDTNIAVPTEGVQPGIPVTYVPARNTIMLSLALAWAEVL 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETW 181
           G  +I +GV   DYSGYPDCR + I A ET  NL  ++ V      +H PL+ L K E  
Sbjct: 114 GSRDIFVGVNAVDYSGYPDCRPEYIAAFETMANLATKAGVEGHKLSIHAPLIDLSKAEII 173

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           +    +G      +    + +CY          G  C  C +C LR +G+    
Sbjct: 174 RTGAALG------VDYSLTVSCYQADE-----QGRACGVCDSCRLRAEGFAAAG 216


>gi|182416846|ref|ZP_02948232.1| ExsB protein [Clostridium butyricum 5521]
 gi|237669043|ref|ZP_04529027.1| ExsB protein [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182379308|gb|EDT76807.1| ExsB protein [Clostridium butyricum 5521]
 gi|237657391|gb|EEP54947.1| ExsB protein [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 218

 Score =  178 bits (450), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 96/232 (41%), Positives = 140/232 (60%), Gaps = 21/232 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A+++FSGGQDS+TCL WAL++FD V  ++F+Y Q++K+E+EC   + K++      
Sbjct: 1   MNKKAVVVFSGGQDSTTCLFWALEQFDEVIAVTFNYNQKHKLEIECAKSIAKELG----- 55

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN--LPNTFVPGRNIIFLVFAATLAY 124
                 E HIL + +L  ++ ++LT++        N   P+TFV GRN++FL FA  LA 
Sbjct: 56  -----VEHHILDMGLLNQLAPNALTRDDIEIKMGENGEPPSTFVEGRNMLFLTFAGVLAK 110

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G  +IV GVCETD+SGYPDCR   ++++   +NL M+    VHTPLMW+ K ETWK+A
Sbjct: 111 VKGAKHIVTGVCETDFSGYPDCRDVFVKSLNVTMNLAMDYEFVVHTPLMWIDKAETWKMA 170

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            D G    +  + E++ TCY G        G GC  CPAC LR++G   + E
Sbjct: 171 DDFG---KLEYVREKTLTCYNGI------IGDGCGKCPACILRKRGLDNYLE 213


>gi|197120054|ref|YP_002140481.1| 7-cyano-7-deazaguanine synthase [Geobacter bemidjiensis Bem]
 gi|254764348|sp|B5EDQ7|QUEC_GEOBB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|197089414|gb|ACH40685.1| 7-cyano-7-deazaguanine synthase [Geobacter bemidjiensis Bem]
          Length = 225

 Score =  178 bits (450), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 85/244 (34%), Positives = 120/244 (49%), Gaps = 32/244 (13%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L+SGG DS+TCL+ A ++      LSF YGQR++ ELE      + +  +   
Sbjct: 1   MQKKAVILYSGGLDSTTCLAIAKEQGFAPYALSFSYGQRHQQELEVAKLNARPMGAV--- 57

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ--DNNLPNTFVPGRNIIFLVFAATLAY 124
                  DH+L    L  +  S+LT ++ +  +     +P T+VP RN IFL FA   A 
Sbjct: 58  -------DHLLVEFDLRKMGGSALTSDIEVPKEGVGEEIPVTYVPARNTIFLSFALGWAE 110

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYE 179
            L   +I IGV   DYSGYPDCR + I A ET  NL  ++ V      +HTPL+ L K E
Sbjct: 111 TLDCFDIFIGVNALDYSGYPDCRPEFISAYETMANLATKAGVEGKRLKIHTPLISLTKAE 170

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK---- 235
             +    +G      +   ++H+CY    D     G  C  C +C LR KG+ E      
Sbjct: 171 IIQKGLSLG------VDYSKTHSCYDPAED-----GAACGRCDSCRLRLKGFAEAGVTDP 219

Query: 236 EKYQ 239
            KYQ
Sbjct: 220 VKYQ 223


>gi|253702376|ref|YP_003023565.1| exsB protein [Geobacter sp. M21]
 gi|259551532|sp|C6E7E7|QUEC_GEOSM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|251777226|gb|ACT19807.1| exsB protein [Geobacter sp. M21]
          Length = 225

 Score =  178 bits (450), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 84/244 (34%), Positives = 119/244 (48%), Gaps = 32/244 (13%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L+SGG DS+TCL+ A  +      LSF YGQR++ ELE      + +  +   
Sbjct: 1   MQKKAVILYSGGLDSTTCLAIAKKQGFAPYALSFSYGQRHQQELEVAKLNARPMGAV--- 57

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ--DNNLPNTFVPGRNIIFLVFAATLAY 124
                  DH+L    L  +  S+LT ++ +  +     +P T+VP RN IFL FA   A 
Sbjct: 58  -------DHLLVEFDLRKMGGSALTSDIEVPKEGVGEEIPVTYVPARNTIFLSFALGWAE 110

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYE 179
            L   +I IGV   DYSGYPDCR + I A ET  NL  ++ V      +HTPL+ L K E
Sbjct: 111 TLDCFDIFIGVNALDYSGYPDCRPEFISAYETMANLATKAGVEGKRLQIHTPLISLTKAE 170

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK---- 235
             +    +G      +   ++H+CY    D     G  C  C +C LR KG+ E      
Sbjct: 171 IIQKGISLG------VDYSKTHSCYDPAED-----GAACGRCDSCRLRLKGFAEAGVTDP 219

Query: 236 EKYQ 239
            +YQ
Sbjct: 220 VRYQ 223


>gi|170754738|ref|YP_001781193.1| ExsB protein [Clostridium botulinum B1 str. Okra]
 gi|254764324|sp|B1IL95|QUEC_CLOBK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|169119950|gb|ACA43786.1| ExsB protein [Clostridium botulinum B1 str. Okra]
          Length = 219

 Score =  178 bits (450), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 100/235 (42%), Positives = 141/235 (60%), Gaps = 23/235 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A+++FSGGQDS+TCL WA  ++  V  +SFDY Q++K+EL+C   + KK       
Sbjct: 2   NKEKAIVVFSGGQDSTTCLFWAKKKYKEVIAVSFDYNQKHKLELDCAKDICKK------- 54

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                 E HIL L +L  ++ +SLT+    V        +PN+FV GRN++FL F A  A
Sbjct: 55  ---YNIEHHILDLNLLNQLAPNSLTRQDITVDKSAPKEGVPNSFVDGRNLLFLSFVAVFA 111

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            + GI  I+ GV ++D+SGYPDCR   I+++   +NL M+    + TPLMW+ K ETWK+
Sbjct: 112 KQKGINTIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYEFEIITPLMWINKAETWKM 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
           A D+G  D+V    EE+ TCY G +        GC  CPAC LR+KG++EF EKY
Sbjct: 172 AYDLGVLDIVK---EETLTCYNGIK------ADGCGECPACNLRKKGYLEF-EKY 216


>gi|306831583|ref|ZP_07464741.1| transcription regulator ExsB [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304426368|gb|EFM29482.1| transcription regulator ExsB [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 242

 Score =  178 bits (450), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 107/235 (45%), Positives = 156/235 (66%), Gaps = 20/235 (8%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D +K+  SAL++FSGGQDS+TCL WAL  +D VET++F+YGQR+ +E+E    +      
Sbjct: 26  DKMKRQ-SALVVFSGGQDSTTCLFWALKHYDHVETVTFNYGQRHSLEIEVAKHIA----- 79

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                 +   ++H+L +++LG ++ ++LT+++A++  D++LPNTFV GRN +FL FAA L
Sbjct: 80  -----AEQGVKNHLLDMSLLGQLTENALTRDIAIENPDDDLPNTFVDGRNHLFLSFAAVL 134

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A RLGIT+I+ GVCETD+SGYPDCR   ++++   +NL M+ +  + TPLMWL K ETW+
Sbjct: 135 AKRLGITDIITGVCETDFSGYPDCRDAFVKSLNVTLNLAMDYNFVIQTPLMWLDKSETWE 194

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           LA  +G  D V    E + TCY G +      G GC  CPAC LRQ G  ++  K
Sbjct: 195 LADQLGKFDYVR---ENTLTCYNGIK------GSGCGECPACKLRQAGLEKYLAK 240


>gi|70732079|ref|YP_261835.1| exsB protein [Pseudomonas fluorescens Pf-5]
 gi|110816202|sp|Q4K7E8|QUEC1_PSEF5 RecName: Full=7-cyano-7-deazaguanine synthase 1; AltName:
           Full=7-cyano-7-carbaguanine synthase 1; AltName:
           Full=PreQ(0) synthase 1; AltName: Full=Queuosine
           biosynthesis protein queC 1
 gi|68346378|gb|AAY93984.1| exsB protein [Pseudomonas fluorescens Pf-5]
          Length = 233

 Score =  178 bits (450), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 70/236 (29%), Positives = 101/236 (42%), Gaps = 24/236 (10%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                A++L SGG DS+T ++ A     R  T+SFDYGQR++ EL     V + +  +  
Sbjct: 10  SSEKRAVILLSGGLDSATVVAMARAEGYRCYTMSFDYGQRHRAELHAAERVARDLGVVEH 69

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           K          L L  +G  + +  T  V        +P T+VP RN +FL  A   A  
Sbjct: 70  KVIG-------LNLNGIGGSALTDSTIEVPEA-PGEGIPVTYVPARNTVFLSLALGWAEV 121

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYET 180
           L   +I IGV   DYSGYPDCR + + A E   NL  +         +  PL  L K E 
Sbjct: 122 LHARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAPLQNLSKAEI 181

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            +    +G      +    + +CY          G+ C  C +C LR +G+     
Sbjct: 182 IQAGVRLG------VDYGLTVSCYQADDS-----GHACGKCDSCRLRAEGFKAAGI 226


>gi|229543595|ref|ZP_04432655.1| exsB protein [Bacillus coagulans 36D1]
 gi|229328015|gb|EEN93690.1| exsB protein [Bacillus coagulans 36D1]
          Length = 221

 Score =  178 bits (450), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 98/230 (42%), Positives = 141/230 (61%), Gaps = 21/230 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WA  +F  VE ++FDYGQR+++E+EC   + +++      
Sbjct: 2   KKEKAVVVFSGGQDSTTCLFWAKKKFQEVEAVTFDYGQRHRLEIECAKNIAEELG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKI--QDNNLPNTFVPGRNIIFLVFAATLAY 124
                 + HIL + +L  ++ ++LT+         D  LPNTFVPGRN++FL FA  LA 
Sbjct: 57  -----VKQHILDMQLLNQLAPNALTRESITVKAGADGELPNTFVPGRNLLFLSFAGVLAS 111

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++G  +IV GVCETD+SGYPDCR   I+++   +NL M+    +HTPLMW  K ETW LA
Sbjct: 112 QIGARHIVTGVCETDFSGYPDCRDIFIKSLNVTLNLSMDQQFVIHTPLMWRNKAETWALA 171

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            ++G  D V    E++ TCY G          GC  CPAC LR++G  ++
Sbjct: 172 DELGAFDFVR---EKTLTCYNGI------IADGCGECPACKLRKRGLEQY 212


>gi|77920572|ref|YP_358387.1| putative transcriptional regulator [Pelobacter carbinolicus DSM
           2380]
 gi|110816239|sp|Q3A090|QUEC_PELCD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|77546655|gb|ABA90217.1| preQ(0) biosynthesis protein QueC [Pelobacter carbinolicus DSM
           2380]
          Length = 230

 Score =  178 bits (450), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 80/236 (33%), Positives = 110/236 (46%), Gaps = 24/236 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +  A++L+SGG DS+TCL+ A         LSF YGQR+ VELE       ++      
Sbjct: 1   MSKKAVVLYSGGLDSTTCLAEARAAGFTPYALSFHYGQRHTVELEKARLYAPQVGAADHM 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D         L  +G  + +S  +    +  D+ +P T+VP RN IFL FA   A  L
Sbjct: 61  VID-------FDLRRIGGSALTSDEEVPKGREIDDAIPVTYVPARNTIFLSFALGWAEVL 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLKKYET 180
           G  +I IGV   DYSGYPDCR + I A E   NL  ++ V       VH PL+ L K + 
Sbjct: 114 GSFDIFIGVNALDYSGYPDCRPEFISAFEQLANLATKAGVEGQGQYRVHAPLLHLTKAQI 173

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            K   ++G      +    +H+CY          G  C  C +C LR KG+ E   
Sbjct: 174 IKRGLELG------VDYSLTHSCYDP-----TPEGLACGLCDSCQLRLKGFAEAGI 218


>gi|222053803|ref|YP_002536165.1| exsB protein [Geobacter sp. FRC-32]
 gi|254764349|sp|B9M0M7|QUEC_GEOSF RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|221563092|gb|ACM19064.1| exsB protein [Geobacter sp. FRC-32]
          Length = 229

 Score =  178 bits (450), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 77/237 (32%), Positives = 111/237 (46%), Gaps = 29/237 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L+SGG DS+TC++ A +       +SFDYGQR+ VEL       K +      
Sbjct: 1   MKKKAVILYSGGLDSTTCMAIAREEGFEPYAMSFDYGQRHSVELATAKANAKTMGA---- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ--DNNLPNTFVPGRNIIFLVFAATLAY 124
                  +H++    L  +  S+LT ++ +  +     +P T+VP RN IFL FA   A 
Sbjct: 57  ------SEHLVVSFDLRKVGGSALTADLDVPKEGIGAGIPVTYVPARNTIFLSFALGWAE 110

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPLMWLKKY 178
            LG  +I IGV   DYSGYPDCR + I A E   NL   + V       +H PL+ + K 
Sbjct: 111 VLGAFDIFIGVNALDYSGYPDCRPEYIAAFEATANLATRAGVEGTGRFVIHAPLIAMTKA 170

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           E  +    +G      +    +H+CY          G  C  C +C LR KG+ E  
Sbjct: 171 EIIRKGLALG------VDYGRTHSCYDP-----TPEGLACGLCDSCRLRLKGFAEAG 216


>gi|322373084|ref|ZP_08047620.1| ExsB protein [Streptococcus sp. C150]
 gi|321278126|gb|EFX55195.1| ExsB protein [Streptococcus sp. C150]
          Length = 217

 Score =  177 bits (449), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 100/231 (43%), Positives = 145/231 (62%), Gaps = 19/231 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              SAL++FSGGQDS+TCL WAL  ++ VE ++F YGQR+ +E+E    + K+       
Sbjct: 2   NRQSALVVFSGGQDSTTCLFWALKHYETVELVTFAYGQRHSLEIEVAKEIAKEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H+L +++LG I+ ++LT ++ ++ ++  +PNTFV GRN +FL FAA LA + 
Sbjct: 57  -----LKHHVLDMSLLGQITENALTSDIEIESEEGEVPNTFVDGRNHLFLSFAAVLAKQR 111

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GIT+IV GVCETD+SGYPDCR   ++++   +NL M     + TPLMWL K ETW LA  
Sbjct: 112 GITDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMAYDFVIQTPLMWLDKAETWALADQ 171

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +G  D V    E++ TCY G        G GC  CPAC+LRQ+G  ++  +
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGTGCGECPACHLRQRGLEKYLAE 213


>gi|89097394|ref|ZP_01170283.1| aluminum resistance protein [Bacillus sp. NRRL B-14911]
 gi|89087690|gb|EAR66802.1| aluminum resistance protein [Bacillus sp. NRRL B-14911]
          Length = 218

 Score =  177 bits (449), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 95/234 (40%), Positives = 146/234 (62%), Gaps = 20/234 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WA   F  VE ++FDYGQR+  ELEC   +   +      
Sbjct: 2   KNEKAIVVFSGGQDSTTCLFWAKKNFKEVEAVTFDYGQRHIAELECARRIAADLA----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 + H+L +++L  ++ ++LT K++ ++ ++  LP+TFVPGRN++FL FA  LA +
Sbjct: 57  -----IQHHVLDMSLLNQLAPNALTRKDIKVEEKEGELPSTFVPGRNLLFLSFAGVLASQ 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +   +I+ GVCETD+SGYPDCR   ++++   +NL M+S   +HTPLMWL K ETWKLA 
Sbjct: 112 VAAKHIITGVCETDFSGYPDCRDQFVKSLNVTLNLSMDSQFVIHTPLMWLNKAETWKLAD 171

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           ++G    +  + +++ TCY G          GC  CPAC LR++G  ++  + Q
Sbjct: 172 ELGA---LEYVRKQTLTCYEG------VIADGCGECPACRLRKRGLEDYLAERQ 216


>gi|228477584|ref|ZP_04062217.1| ExsB protein [Streptococcus salivarius SK126]
 gi|228250728|gb|EEK09926.1| ExsB protein [Streptococcus salivarius SK126]
          Length = 217

 Score =  177 bits (449), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 101/231 (43%), Positives = 146/231 (63%), Gaps = 19/231 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WAL  ++ VE ++F YGQR+ +E+E    + ++       
Sbjct: 2   KRRSALVVFSGGQDSTTCLFWALKHYETVELVTFAYGQRHSLEIEVAKEIAQEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H+L +++LG I+ ++LT ++ ++ ++  +PNTFV GRN +FL FAA LA + 
Sbjct: 57  -----LKHHVLDMSLLGQITENALTSDIEIEAEEGEVPNTFVDGRNHLFLSFAAVLAKQR 111

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GIT+IV GVCETD+SGYPDCR   ++++   +NL M     + TPLMWL K ETW LA  
Sbjct: 112 GITDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMAYDFVIQTPLMWLDKAETWALADQ 171

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +G  D V    E++ TCY G        G GC  CPAC+LRQKG  ++  +
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGTGCGECPACHLRQKGLEKYLAE 213


>gi|306833728|ref|ZP_07466854.1| transcription regulator ExsB [Streptococcus bovis ATCC 700338]
 gi|304424065|gb|EFM27205.1| transcription regulator ExsB [Streptococcus bovis ATCC 700338]
          Length = 244

 Score =  177 bits (449), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 106/235 (45%), Positives = 155/235 (65%), Gaps = 20/235 (8%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D +K+  SAL++FSGGQDS+TCL WAL  +D VET++F+YGQR+ +E+E    +      
Sbjct: 26  DKMKRQ-SALVVFSGGQDSTTCLFWALKHYDHVETVTFNYGQRHSLEIEVAKHIA----- 79

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                 +   ++H+L +++LG ++ ++LT+++ ++  D++LPNTFV GRN +FL FAA L
Sbjct: 80  -----AEQGVKNHLLDMSLLGQLTENALTRDIVIENPDDDLPNTFVDGRNHLFLSFAAVL 134

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A RLGIT+I+ GVCETD+SGYPDCR   ++++   +NL M+ +  + TPLMWL K ETW+
Sbjct: 135 AKRLGITDIITGVCETDFSGYPDCRDAFVKSLNVTLNLAMDYNFVIQTPLMWLDKSETWE 194

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           LA  +G  D V    E + TCY G +      G GC  CPAC LRQ G  ++  K
Sbjct: 195 LADQLGKFDYVR---ENTLTCYNGIK------GSGCGECPACKLRQAGLEKYLAK 240


>gi|88800188|ref|ZP_01115756.1| exsB protein [Reinekea sp. MED297]
 gi|88777034|gb|EAR08241.1| exsB protein [Reinekea sp. MED297]
          Length = 227

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 77/244 (31%), Positives = 111/244 (45%), Gaps = 29/244 (11%)

Query: 5   IKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +    A++L SGG DS+T L+ A      V  LSFDYGQR+  EL+    +       
Sbjct: 1   MSENKSKAVVLLSGGLDSTTVLAKAKADGCEVYALSFDYGQRHDSELDAARKIAANAQVA 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
             K          + L  +G  + +    +V  + +   +P T+VP RN +FL  A   A
Sbjct: 61  EHKIVP-------MNLRSIGGSALTDDAIDVPEQ-ESEGIPATYVPARNTVFLSIALGWA 112

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKY 178
             +    I IGV   DYSGYPDCR + I A ET  NL  +       V + TPL+ L K 
Sbjct: 113 EVIDADAIYIGVSAVDYSGYPDCRPEYIEAYETLANLATKRGVEGRRVEIRTPLINLTKA 172

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK--- 235
           +T KL Q +G      +   E+ +CY          G  C  C +C LR+KG+ +     
Sbjct: 173 DTVKLGQSLG------VDYAETVSCYQA-----NANGEACGVCDSCRLRKKGFADAGMTD 221

Query: 236 -EKY 238
             +Y
Sbjct: 222 PTRY 225


>gi|254414877|ref|ZP_05028641.1| exsB protein [Microcoleus chthonoplastes PCC 7420]
 gi|196178366|gb|EDX73366.1| exsB protein [Microcoleus chthonoplastes PCC 7420]
          Length = 232

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 73/240 (30%), Positives = 108/240 (45%), Gaps = 29/240 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A++L SGG DSST L  A         +SFDY QR++ ELE  + + K       +
Sbjct: 5   KMSKAVVLLSGGLDSSTVLYQAKAEGYECYAISFDYQQRHQRELESAIAIAKGAGVKYHQ 64

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATL 122
                       L+  G  + +  T ++      +    ++P T+VP RN IFL F  + 
Sbjct: 65  VV-------RFDLSQWGGSALTDDTLDLPQTRSLQQMSQSIPITYVPARNTIFLSFGLSY 117

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKK 177
           A  +G T + +GV   DYSGYPDCR D I+A++    LG +       + + TPL+ LKK
Sbjct: 118 AEAIGATALYLGVNALDYSGYPDCRPDYIQAMQEVFRLGTKQGREGEPIQIITPLIQLKK 177

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            E  +L   +G      +   E+ +CY G           C  C +C LR   + E    
Sbjct: 178 TEIIELGNKLG------VPWHETWSCYAGDE-------VACGVCDSCRLRLAAFAELGLN 224


>gi|171778271|ref|ZP_02919477.1| hypothetical protein STRINF_00319 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282971|gb|EDT48395.1| hypothetical protein STRINF_00319 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 216

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 104/231 (45%), Positives = 153/231 (66%), Gaps = 19/231 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WAL+ ++ VET++F+YGQR+ +E+E    +          
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWALEHYEHVETVTFNYGQRHSLEIEVAKHIA--------- 52

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +   ++H+L +++LG ++ ++LT+++ ++  D++LPNTFV GRN +FL FAA LA RL
Sbjct: 53  -AEQGVKNHLLDMSLLGQLTENALTRDIEIENPDDDLPNTFVDGRNHLFLSFAAVLAKRL 111

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GIT+I+ GVCETD+SGYPDCR   ++++   +NL M  +  +HTPLMWL K ETW+LA  
Sbjct: 112 GITDIITGVCETDFSGYPDCRDAFVKSLNVTLNLAMNYNFVIHTPLMWLDKSETWELADQ 171

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +G  D V    E + TCY G +      G GC  CPAC LRQ G  ++  +
Sbjct: 172 LGKFDYVR---ENTFTCYNGIK------GSGCGECPACKLRQAGLEKYLAR 213


>gi|254787331|ref|YP_003074760.1| ExsB protein [Teredinibacter turnerae T7901]
 gi|237683716|gb|ACR10980.1| ExsB protein [Teredinibacter turnerae T7901]
          Length = 224

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 71/236 (30%), Positives = 113/236 (47%), Gaps = 24/236 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +  A++L SGG DS+T L+ A D+     TLSFDYGQR++ EL+    V + +     K
Sbjct: 1   MSKKAVVLVSGGLDSATVLAMAKDQGYECFTLSFDYGQRHRAELQAAERVAQAMGAAQHK 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     L L  +G  + +  + +V    + + +P T+VP RN +FL  A   A  +
Sbjct: 61  VV-------SLDLRTIGGSALTDDSISVPEG-ETSGIPVTYVPARNTVFLSIALGWAEVV 112

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETW 181
           G   I IGV   DYSGYPDCR + I+A +   +L  +       V + TPL+ L K +  
Sbjct: 113 GAQAIFIGVNAVDYSGYPDCRPEYIKAYQAMADLATKAGVEGRGVAIKTPLIELSKADII 172

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                +      ++    + +CY    D     G  C  C +C LR++G+++   +
Sbjct: 173 CHGHAL------HVDYALTVSCYQADDD-----GRACGKCDSCRLRRRGFLDAGVE 217


>gi|55820874|ref|YP_139316.1| hypothetical protein stu0825 [Streptococcus thermophilus LMG 18311]
 gi|55822790|ref|YP_141231.1| hypothetical protein str0825 [Streptococcus thermophilus CNRZ1066]
 gi|81559500|sp|Q5M064|QUEC_STRT1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|81560693|sp|Q5M4S5|QUEC_STRT2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|55736859|gb|AAV60501.1| conserved hypothetical protein [Streptococcus thermophilus LMG
           18311]
 gi|55738775|gb|AAV62416.1| conserved hypothetical protein [Streptococcus thermophilus
           CNRZ1066]
          Length = 217

 Score =  177 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 101/234 (43%), Positives = 145/234 (61%), Gaps = 19/234 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WAL  ++ VE ++F YGQR+ +E+E    + ++       
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWALKHYETVELVTFAYGQRHSLEIEVAKEIAQEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H+L +++LG I+ ++LT ++ ++ +   +PNTFV GRN +FL FAA LA + 
Sbjct: 57  -----LKHHVLDMSLLGQITENALTSDIEIEAEKGEVPNTFVDGRNHLFLSFAAVLAKQR 111

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI +IV GVCETD+SGYPDCR   ++++   +NL M     + TPLMWL K ETW LA  
Sbjct: 112 GIIDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMAYDFVIQTPLMWLDKAETWALADQ 171

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
           +G  D V    E++ TCY G        G GC  CPAC+LRQKG  ++  +  D
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGTGCGDCPACHLRQKGLEKYLAEKGD 216


>gi|228475297|ref|ZP_04060021.1| ExsB protein [Staphylococcus hominis SK119]
 gi|314936989|ref|ZP_07844336.1| ExsB protein [Staphylococcus hominis subsp. hominis C80]
 gi|228270673|gb|EEK12087.1| ExsB protein [Staphylococcus hominis SK119]
 gi|313655608|gb|EFS19353.1| ExsB protein [Staphylococcus hominis subsp. hominis C80]
          Length = 225

 Score =  177 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 93/241 (38%), Positives = 149/241 (61%), Gaps = 20/241 (8%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M + +  +  A+++FSGGQDS+TCL +A   F  VE ++F+YGQR+  E+E    + K  
Sbjct: 1   MPNSVLNSEKAIVVFSGGQDSTTCLFYAKRHFKEVELVTFNYGQRHNTEIEVASKIAK-- 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                   D   + HIL +++L  ++ ++LT  ++ ++  ++ +PNTFVP RN++FL FA
Sbjct: 59  --------DQGLKHHILDMSLLSQLTPNALTKHDMTIETGEDGIPNTFVPARNLLFLSFA 110

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
             LAY++   +I+ GVCETD+SGYPDCR   I+++   ++L M+    +HTPLMWL K +
Sbjct: 111 GALAYQVNAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLSMDRDFVIHTPLMWLDKAQ 170

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           TW+L+ ++G   ++N +   + TCY G        G GC  CPAC LRQ+G  ++ E+  
Sbjct: 171 TWELSDELG---VLNYVRHNTLTCYNGI------IGDGCGKCPACKLRQRGLHQYLEQKG 221

Query: 240 D 240
           D
Sbjct: 222 D 222


>gi|164506981|gb|ABY59726.1| aluminum resistance protein [Anoxybacillus gonensis]
          Length = 221

 Score =  177 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 91/229 (39%), Positives = 143/229 (62%), Gaps = 20/229 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WA   F  VE ++FDY QR+++E++    + K++      
Sbjct: 2   KKEKAVVVFSGGQDSTTCLFWAKKHFAEVEAVTFDYNQRHRLEIDVAASIAKELN----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    +L +++L  ++ ++LT+ ++A++ ++  LP+TFV GRN++FL FAA LA +
Sbjct: 57  -----VPHTVLDMSLLNQLAPNALTRSDIAIEQKEGQLPSTFVDGRNLLFLSFAAVLAKQ 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G  ++V GVCETD+SGYPDCR   I+++   +NL M+    +HTPLMWL K ETWKLA 
Sbjct: 112 KGARHLVTGVCETDFSGYPDCRDVFIKSLNVTLNLAMDYQFVIHTPLMWLNKAETWKLAD 171

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           ++G    +  +  ++ TCY G          GC  CPAC LR++G  ++
Sbjct: 172 ELGA---LEFVRNKTLTCYNGI------IADGCGECPACVLRKRGLDQY 211


>gi|90417120|ref|ZP_01225048.1| exsB protein [marine gamma proteobacterium HTCC2207]
 gi|90331136|gb|EAS46392.1| exsB protein [marine gamma proteobacterium HTCC2207]
          Length = 226

 Score =  177 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 74/242 (30%), Positives = 113/242 (46%), Gaps = 28/242 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            A  A++L SGG DS+T ++ A  +     TLSFDYGQR++ EL     + + +     K
Sbjct: 1   MAKKAVILVSGGLDSTTVVAMAKSQGYDCYTLSFDYGQRHRSELVAAQKISELMTVHAHK 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     L L  +G  + +  +  V    +   +P T+VP RN +FL  A   A  L
Sbjct: 61  VVK-------LDLGSIGGSALTDSSIEVPET-ETTGIPVTYVPARNTVFLSIALGWAEVL 112

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETW 181
           G  +I +GV   DYSGYPDCR + I+A ET  NL  ++ V      +H PL+ L K +  
Sbjct: 113 GANDIFLGVNAVDYSGYPDCRPEYIKAFETMANLATKAAVEGQKLTIHAPLIDLTKGQIV 172

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EK 237
           +    +G      +    + +CY          G  C  C +C LR++G+ +       +
Sbjct: 173 EAGMALG------VDYSNTVSCYQA-----NLEGEACGKCESCRLRRQGFEQAGIKDPTR 221

Query: 238 YQ 239
           YQ
Sbjct: 222 YQ 223


>gi|310640610|ref|YP_003945368.1| atpase, confers aluminum resistance [Paenibacillus polymyxa SC2]
 gi|309245560|gb|ADO55127.1| Putative ATPase, confers aluminum resistance [Paenibacillus
           polymyxa SC2]
          Length = 227

 Score =  177 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 91/231 (39%), Positives = 138/231 (59%), Gaps = 20/231 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +     A+++FSGGQDS+TCL WA   F  VET++FDYGQR+K E+E    +  ++    
Sbjct: 1   MFTNEKAVVVFSGGQDSTTCLFWAKKHFAEVETVTFDYGQRHKQEIEVAAGIASELG--- 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      +L +++L  ++ ++LT  ++ +  ++  LP+TFV GRN++FL FAA LA
Sbjct: 58  -------VPQTVLDMSLLNQLAPNALTRTDIDITQEEGELPSTFVDGRNLLFLSFAAVLA 110

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            + G  +I+ GVCETD+SGYPDCR   I+++   +NL M+    +HTPLMWL K ETW++
Sbjct: 111 KQKGARHIITGVCETDFSGYPDCRDSFIKSLNVTLNLSMDYPFVIHTPLMWLNKAETWQM 170

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           A ++   + V      + TCY G        G GC  CPAC LR+ G  ++
Sbjct: 171 ADELKAFEFVR---TRTLTCYNGI------IGDGCGECPACNLRRAGLEQY 212


>gi|160893111|ref|ZP_02073899.1| hypothetical protein CLOL250_00657 [Clostridium sp. L2-50]
 gi|156865194|gb|EDO58625.1| hypothetical protein CLOL250_00657 [Clostridium sp. L2-50]
          Length = 226

 Score =  177 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 97/239 (40%), Positives = 146/239 (61%), Gaps = 25/239 (10%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +K    A+++FSGGQDS+TCL WAL ++ +V  +SFDYGQ++  ELEC   + +K     
Sbjct: 4   LKNRDEAVVVFSGGQDSTTCLLWALKKYKKVYAVSFDYGQKHIKELECAKKIAEKFG--- 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLT---KNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                   E HIL +++L  ++ +SLT     V     +   PNTFV GRN++FL F A 
Sbjct: 61  -------VEHHILDMSLLNQLAPNSLTRSEMKVDENAPEVGTPNTFVDGRNMVFLTFVAI 113

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            A + G+++I+ GV ++D+SGYPDCR   I+++ T +NL M+    + TPLMW+ K ETW
Sbjct: 114 YAKQKGVSDIITGVSQSDFSGYPDCRDIFIKSLNTTLNLAMDYEFDIITPLMWIDKMETW 173

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG---WMEFKEK 237
           KLA ++   D +++I + + TCY G        G GC  CP+C LR+KG   +ME+K+ 
Sbjct: 174 KLADEL---DGLDVIRDMTLTCYNGIP------GEGCGHCPSCKLRKKGYDLYMEYKKN 223


>gi|118442853|ref|YP_878459.1| exsB protein [Clostridium novyi NT]
 gi|189038910|sp|A0Q1F7|QUEC_CLONN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|118133309|gb|ABK60353.1| exsB protein [Clostridium novyi NT]
          Length = 221

 Score =  177 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 99/238 (41%), Positives = 145/238 (60%), Gaps = 22/238 (9%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      A+++FSGGQDS+TCL W   RF  V  +SFDY Q++K+ELEC   +  K    
Sbjct: 1   MSINNEKAIVVFSGGQDSTTCLFWTKKRFKEVIAVSFDYNQKHKLELECAKEICSK---- 56

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLT---KNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                    E HIL L +L  ++ +SLT     V     ++ +PN+FV GRN++FL F A
Sbjct: 57  ------YNIEHHILDLGLLNQLAPNSLTRTDIKVDKNAPEDGVPNSFVDGRNMLFLTFVA 110

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
             A + GI++I+ GV ++D+SGYPDCR   I+++   +NL M+    +HTPLMW+ K ET
Sbjct: 111 VFAKQRGISHIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYEFVLHTPLMWIDKAET 170

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
           WK+A D G   ++++I  E+ TCY G +      G GC  CP+C LR+KG+++FKE Y
Sbjct: 171 WKMAYDFG---VLDIIKNETLTCYNGIK------GNGCGECPSCKLRKKGYLKFKELY 219


>gi|150017399|ref|YP_001309653.1| exsB protein [Clostridium beijerinckii NCIMB 8052]
 gi|189038906|sp|A6LWG7|QUEC_CLOB8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|149903864|gb|ABR34697.1| exsB protein [Clostridium beijerinckii NCIMB 8052]
          Length = 217

 Score =  177 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 99/232 (42%), Positives = 140/232 (60%), Gaps = 21/232 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +  A+++FSGGQDS+TCL WAL  FD V  ++FDY Q+++ E+EC   + K++      
Sbjct: 1   MSNKAVVVFSGGQDSTTCLFWALKEFDEVIAVTFDYNQKHRKEIECATSIAKELG----- 55

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL--PNTFVPGRNIIFLVFAATLAY 124
                 E HIL + +L  ++ ++LT+N        N   P+TFV GRN++FL FA  LA 
Sbjct: 56  -----IEHHILDMGLLNQLAPNALTRNDIEIKAGENGSLPSTFVEGRNMLFLTFAGVLAK 110

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G  +IV GVCETD+SGYPDCR   I+++   +NL M+ +  VHTPLMW+ K ETWK+A
Sbjct: 111 VKGAKHIVTGVCETDFSGYPDCRDIFIKSLNVTLNLAMDYNFVVHTPLMWIDKAETWKMA 170

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            D G    ++ I E++ TCY G        G GC  CPAC LR+ G  ++ E
Sbjct: 171 DDFG---KLDYIREKTLTCYKGIV------GDGCGECPACKLRKNGLDKYLE 213


>gi|258423361|ref|ZP_05686252.1| exsB protein [Staphylococcus aureus A9635]
 gi|257846422|gb|EEV70445.1| exsB protein [Staphylococcus aureus A9635]
          Length = 222

 Score =  177 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 91/235 (38%), Positives = 148/235 (62%), Gaps = 20/235 (8%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +     A+++FSGGQDS+TCL +A  +F  VE ++F+YGQR+  E+E    + +    
Sbjct: 2   ESVLNNEKAIVVFSGGQDSTTCLFYAKKQFKEVELVTFNYGQRHDTEIEVAKQIAQ---- 57

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                 D   + H+L +++L  ++ ++LT  ++ +   ++ +PNTFVP RN++FL FA  
Sbjct: 58  ------DQGMKHHVLDMSLLSQLTPNALTQHDMEITNNEDGIPNTFVPARNLLFLSFAGA 111

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           LAY++G  +I+ GVCETD+SGYPDCR   I+++   ++L M+    +HTPLMWL K ETW
Sbjct: 112 LAYQIGAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLAMDKDFVIHTPLMWLNKAETW 171

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           KL+ ++   ++++ I  ++ TCY G        G GC  CPAC+LRQ+G  ++ E
Sbjct: 172 KLSDEL---EVLDYIRTKTLTCYNGI------IGDGCGECPACHLRQRGLNQYLE 217


>gi|330811383|ref|YP_004355845.1| transcription factor, ExsB family [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327379491|gb|AEA70841.1| Putative transcription factor, ExsB family [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 230

 Score =  177 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 69/240 (28%), Positives = 102/240 (42%), Gaps = 28/240 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A++L SGG DS+T ++ A     R  T+SFDYGQR++ EL     V + +  +  K 
Sbjct: 9   EKRAVILLSGGLDSATVVAMARAEGYRCYTMSFDYGQRHRAELHAAERVARDLGVVEHKV 68

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    L L  +G  + +  + +V     +      +VP RN +FL  A   A  LG
Sbjct: 69  IG-------LNLNGIGGSALTDSSIDVPEAPSEGIPVT-YVPARNTVFLSLALGWAEVLG 120

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWK 182
             +I IGV   DYSGYPDCR + + A E   NL  +         +  PL  L K +  K
Sbjct: 121 ARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRILAPLQNLSKADIVK 180

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKY 238
               +G      +    + +CY          G  C  C +C LR +G+         +Y
Sbjct: 181 AGVKLG------VDYGLTVSCYQADD-----QGRACGKCDSCRLRAEGFAAAGVSDPTRY 229


>gi|217969209|ref|YP_002354443.1| exsB protein [Thauera sp. MZ1T]
 gi|217506536|gb|ACK53547.1| exsB protein [Thauera sp. MZ1T]
          Length = 233

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 73/244 (29%), Positives = 101/244 (41%), Gaps = 27/244 (11%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +   P A++L SGG DS+TCL+ A D       LS  YGQR+  EL     V + +    
Sbjct: 4   LHTPPRAVVLLSGGLDSATCLAIARDMGFETYALSVAYGQRHAAELAASKRVAQALGARE 63

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            +          + L   G  + +     V +   +  +P T+VP RN + L  A   A 
Sbjct: 64  HRTA-------SVELGQFGGSALTDPGIAVPLDQDNTGIPVTYVPARNTVMLSIALAWAE 116

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYE 179
            LG  +I +GV   DYSGYPDCR   I A E    L  +  V      +H PL+ L K +
Sbjct: 117 VLGANDIFVGVNAVDYSGYPDCRPVFIEAFEHMARLATKVGVEGAQLHIHAPLIELSKAD 176

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK---- 235
             +    +G      +    + TCY    D     G  C  C AC LR  G+        
Sbjct: 177 IIRRGTALG------VDYGLTVTCYQADDD-----GLACGRCEACRLRAAGFKAAGVPDP 225

Query: 236 EKYQ 239
             YQ
Sbjct: 226 TPYQ 229


>gi|261405279|ref|YP_003241520.1| exsB protein [Paenibacillus sp. Y412MC10]
 gi|261281742|gb|ACX63713.1| exsB protein [Paenibacillus sp. Y412MC10]
          Length = 225

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 95/233 (40%), Positives = 146/233 (62%), Gaps = 19/233 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K   A+++FSGGQDS+TCL WA +RF  VET++FDYGQR+K+E+EC   + K+     
Sbjct: 1   MLKNEKAVVVFSGGQDSTTCLFWAKERFAEVETVTFDYGQRHKLEIECAAQIAKEQG--- 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                   +  +L +++L  ++ ++LT++     + + LP TFV GRN++FL FAA LA 
Sbjct: 58  -------VKQTVLDMSLLNQLAPNALTRSDIEIAEGDGLPTTFVDGRNLLFLSFAAVLAK 110

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            +G  +++ GVCETD+SGYPDCR   I+++   +NL M+    +HTPLMWL K ETW+LA
Sbjct: 111 GVGAKHLITGVCETDFSGYPDCRDSFIKSLNVTLNLAMDYPFVIHTPLMWLDKSETWELA 170

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
             +   + +  I + + TCY G +      G GC  CPAC LR+ G  ++ ++
Sbjct: 171 DQM---NALEYIRDHTLTCYNGIK------GDGCGECPACQLRKAGLDKYMQR 214


>gi|325978489|ref|YP_004288205.1| queuosine biosynthesis protein queC [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
 gi|325178417|emb|CBZ48461.1| queuosine biosynthesis protein queC [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
          Length = 215

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 105/231 (45%), Positives = 152/231 (65%), Gaps = 19/231 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WAL  +D VET++F+YGQR+ +E+E    +          
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWALKHYDHVETVTFNYGQRHSLEIEVAKHIA--------- 52

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +   ++H+L +++LG ++ ++LT+++ ++  D++LPNTFV GRN +FL FAA LA RL
Sbjct: 53  -AEQGVKNHLLDMSLLGQLTENALTRDIVIENPDDDLPNTFVDGRNHLFLSFAAVLAKRL 111

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GIT+I+ GVCETD+SGYPDCR   ++++   +NL M+ +  + TPLMWL K ETW+LA  
Sbjct: 112 GITDIITGVCETDFSGYPDCRDAFVKSLNVTLNLAMDYNFVIQTPLMWLDKSETWELADQ 171

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +G  D V    E + TCY G +      G GC  CPAC LRQ G  ++  K
Sbjct: 172 LGKFDYVR---ENTLTCYNGIK------GSGCGECPACKLRQAGLEKYLAK 213


>gi|322516973|ref|ZP_08069863.1| transcription regulator ExsB [Streptococcus vestibularis ATCC
           49124]
 gi|322124456|gb|EFX95951.1| transcription regulator ExsB [Streptococcus vestibularis ATCC
           49124]
          Length = 217

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 100/231 (43%), Positives = 146/231 (63%), Gaps = 19/231 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WAL  ++ VE ++F YGQR+ +E+E    + ++       
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWALKHYETVELVTFAYGQRHSLEIEVAKEIAQEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H+L +++LG I+ ++LT ++ ++ ++  +PNTFV GRN +FL FAA LA + 
Sbjct: 57  -----LKHHVLDMSLLGQITENALTSDLEIEAEEGEVPNTFVDGRNHLFLSFAAVLAKQR 111

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GIT+I+ GVCETD+SGYPDCR   ++++   +NL M     + TPLMWL K ETW LA  
Sbjct: 112 GITDIITGVCETDFSGYPDCRDVFVKSLNVTLNLAMAYDFVIQTPLMWLDKAETWALADQ 171

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +G  D V    E++ TCY G        G GC  CPAC+LRQKG  ++  +
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGTGCGECPACHLRQKGLEKYLAE 213


>gi|85860086|ref|YP_462288.1| queuosine biosynthesis protein [Syntrophus aciditrophicus SB]
 gi|110816269|sp|Q2LVL3|QUEC_SYNAS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|85723177|gb|ABC78120.1| queuosine biosynthesis protein [Syntrophus aciditrophicus SB]
          Length = 231

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 69/240 (28%), Positives = 107/240 (44%), Gaps = 27/240 (11%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +     A++L SGG DS+T ++ A      +  L+F YGQR+ VELE    +   +    
Sbjct: 1   MSPKKKAVVLLSGGLDSATTMAIAKAENYELYALTFQYGQRHAVELEAARRIAAALGAKE 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT---FVPGRNIIFLVFAAT 121
             +         + L I+G  + +   +    +  +         +VP RN IFL +A  
Sbjct: 61  HLF-------ISIDLRIIGGSALTGPFEVPKKQEGEETSAEIPVTYVPARNTIFLSYALA 113

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME------SHVTVHTPLMWL 175
            A  L I+ I IGV   DYSGYPDCR + I A E   NL ++        V + TPL+ L
Sbjct: 114 WAEVLQISEIFIGVNAVDYSGYPDCRPEYITAFEAMANLAIKAAVEGTMRVKIRTPLIDL 173

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K +  +    +      ++    +H+CY          G  C  C +C+LR+KG+ E  
Sbjct: 174 SKADIIRKGMAL------SVDYGLTHSCYDP-----LPDGKPCGQCDSCHLRRKGFREAG 222


>gi|146306313|ref|YP_001186778.1| exsB protein [Pseudomonas mendocina ymp]
 gi|189038935|sp|A4XRT0|QUEC_PSEMY RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|145574514|gb|ABP84046.1| preQ(0) biosynthesis protein QueC [Pseudomonas mendocina ymp]
          Length = 224

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 71/247 (28%), Positives = 107/247 (43%), Gaps = 33/247 (13%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D       A++L SGG DS+T ++ A        ++SFDYGQR++ EL+    V +++
Sbjct: 1   MSD-----KKAVILLSGGLDSATVVAMARAEGYACYSMSFDYGQRHRAELQAAERVARQL 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  K          L L  +G  + +  +  V        +P T+VP RN +FL  A 
Sbjct: 56  GVVEHKVVG-------LNLNGIGGSALTDSSIAVPET-PGEGIPVTYVPARNTVFLSLAL 107

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWL 175
             A  LG  +I IGV   DYSGYPDCR + + A E   NL  +         +  PL  +
Sbjct: 108 GWAEVLGARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFAIRAPLQQM 167

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K E  +    +G      +    + +CY    D     G  C  C +C LR  G+    
Sbjct: 168 SKGEIIQAGMRLG------VDYALTVSCYQADDD-----GRACGKCDSCRLRAAGFAAAG 216

Query: 236 ----EKY 238
                +Y
Sbjct: 217 VPDATRY 223


>gi|226948888|ref|YP_002803979.1| ExsB protein [Clostridium botulinum A2 str. Kyoto]
 gi|254764323|sp|C1FN27|QUEC_CLOBJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|226843177|gb|ACO85843.1| ExsB protein [Clostridium botulinum A2 str. Kyoto]
          Length = 219

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 100/235 (42%), Positives = 140/235 (59%), Gaps = 23/235 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A+++FSGGQDS+TCL WA  ++  V  +SFDY Q++K+EL+C   + KK       
Sbjct: 2   NKEKAIVVFSGGQDSTTCLFWAKKKYKEVIAVSFDYNQKHKLELDCAKDICKK------- 54

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                 E HIL L +L  ++ +SLT+    V        +PN+FV GRN++FL F A  A
Sbjct: 55  ---YNIEHHILDLNLLNQLAPNSLTRQDITVDKSAPKEGVPNSFVDGRNLLFLSFVAVFA 111

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            + GI  I+ GV ++D+SGYPDCR   I+++   +NL M+    + TPLMW+ K ETWK+
Sbjct: 112 KQKGINTIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYEFEIITPLMWINKAETWKM 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
           A D+G  D+V    EE+ TCY G +        GC  CPAC LR+KG+ EF EKY
Sbjct: 172 AYDLGVLDIVK---EETLTCYNGIK------ADGCGECPACKLRKKGYWEF-EKY 216


>gi|288905499|ref|YP_003430721.1| ExsB like protein [Streptococcus gallolyticus UCN34]
 gi|288732225|emb|CBI13790.1| ExsB like protein [Streptococcus gallolyticus UCN34]
          Length = 217

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 105/231 (45%), Positives = 152/231 (65%), Gaps = 19/231 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WAL  +D VET++F+YGQR+ +E+E    +          
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWALKHYDHVETVTFNYGQRHSLEIEVAKHIA--------- 52

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +   ++H+L +++LG ++ ++LT+++ ++  D++LPNTFV GRN +FL FAA LA RL
Sbjct: 53  -AEQGVKNHLLDMSLLGQLTENALTRDIVIENPDDDLPNTFVDGRNHLFLSFAAVLAKRL 111

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GIT+I+ GVCETD+SGYPDCR   ++++   +NL M+ +  + TPLMWL K ETW+LA  
Sbjct: 112 GITDIITGVCETDFSGYPDCRDAFVKSLNVTLNLAMDYNFVIQTPLMWLDKSETWELANQ 171

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +G  D V    E + TCY G +      G GC  CPAC LRQ G  ++  K
Sbjct: 172 LGKFDYVR---ENTLTCYNGIK------GSGCGECPACKLRQAGLEKYLAK 213


>gi|329925236|ref|ZP_08280179.1| protein ExsB [Paenibacillus sp. HGF5]
 gi|328940069|gb|EGG36402.1| protein ExsB [Paenibacillus sp. HGF5]
          Length = 225

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 94/233 (40%), Positives = 146/233 (62%), Gaps = 19/233 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K   A+++FSGGQDS+TCL WA +RF  VET++FDYGQR+K+E+EC   + K+     
Sbjct: 1   MLKNEKAVVVFSGGQDSTTCLFWAKERFAEVETVTFDYGQRHKLEIECAAQIAKEQG--- 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                   +  +L +++L  ++ ++LT++     + + LP TFV GRN++FL FAA LA 
Sbjct: 58  -------VKQTVLDMSLLNQLAPNALTRSDIEIAEGDGLPTTFVDGRNLLFLSFAAVLAK 110

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            +G  +++ GVCETD+SGYPDCR   I+++   +NL M+    +HTPLMWL K ETW+LA
Sbjct: 111 GVGAKHLITGVCETDFSGYPDCRDSFIKSLNVTLNLAMDYPFVIHTPLMWLDKSETWELA 170

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
             +   + +  + + + TCY G +      G GC  CPAC LR+ G  ++ ++
Sbjct: 171 DQM---NALEYVRDHTLTCYNGIK------GDGCGECPACKLRKAGLDKYMQR 214


>gi|255008270|ref|ZP_05280396.1| putative aluminum resistance protein [Bacteroides fragilis 3_1_12]
 gi|313145991|ref|ZP_07808184.1| queuosine biosynthesis protein queC [Bacteroides fragilis 3_1_12]
 gi|313134758|gb|EFR52118.1| queuosine biosynthesis protein queC [Bacteroides fragilis 3_1_12]
          Length = 220

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 94/233 (40%), Positives = 130/233 (55%), Gaps = 16/233 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K  SA++LFSGGQDS+TCL WA   F +V  LSF YGQ++  E+E    + ++     
Sbjct: 1   MMKNDSAVVLFSGGQDSTTCLFWAKKHFSKVYALSFLYGQKHAHEVELARGIAERAGVEF 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                S        +  LG  S +  + ++     +++ PNTFVPGRN+ FL  AA  A 
Sbjct: 61  HVMDTSF-------IGSLGSNSLTDTSISMDEDKPEDSFPNTFVPGRNLFFLSIAAVFAR 113

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G  ++V GV +TDYSGYPDCR   I+++   +NL M+    +HTPLMW+ K ETW LA
Sbjct: 114 EQGAFHLVTGVSQTDYSGYPDCRDSFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWALA 173

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            ++G  DLV     E+ TCY G          GC  CPAC LR++G  E+  K
Sbjct: 174 DELGVFDLVR---NETLTCYNGIP------ADGCGHCPACKLRKQGLEEYLSK 217


>gi|16078436|ref|NP_389255.1| pre-queuosine 0 synthase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221309236|ref|ZP_03591083.1| hypothetical protein Bsubs1_07596 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221313564|ref|ZP_03595369.1| hypothetical protein BsubsN3_07537 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221318486|ref|ZP_03599780.1| hypothetical protein BsubsJ_07471 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221322759|ref|ZP_03604053.1| hypothetical protein BsubsS_07577 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|81341924|sp|O31675|QUEC_BACSU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|189339604|pdb|3BL5|A Chain A, Crystal Structure Of Quec From Bacillus Subtilis: An
           Enzyme Involved In Preq1 Biosynthesis
 gi|189339605|pdb|3BL5|B Chain B, Crystal Structure Of Quec From Bacillus Subtilis: An
           Enzyme Involved In Preq1 Biosynthesis
 gi|189339606|pdb|3BL5|C Chain C, Crystal Structure Of Quec From Bacillus Subtilis: An
           Enzyme Involved In Preq1 Biosynthesis
 gi|189339607|pdb|3BL5|D Chain D, Crystal Structure Of Quec From Bacillus Subtilis: An
           Enzyme Involved In Preq1 Biosynthesis
 gi|189339608|pdb|3BL5|E Chain E, Crystal Structure Of Quec From Bacillus Subtilis: An
           Enzyme Involved In Preq1 Biosynthesis
 gi|189339609|pdb|3BL5|F Chain F, Crystal Structure Of Quec From Bacillus Subtilis: An
           Enzyme Involved In Preq1 Biosynthesis
 gi|2633743|emb|CAB13245.1| pre-queuosine 0 synthase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 219

 Score =  176 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 99/229 (43%), Positives = 149/229 (65%), Gaps = 20/229 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WAL  F+ VET++F Y QR+  E+E    + +K+      
Sbjct: 2   KKEKAIVVFSGGQDSTTCLLWALKEFEEVETVTFHYNQRHSQEVEVAKSIAEKLG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 ++H+L +++L  ++ ++LT+ ++ ++++D  LP+TFVPGRN++FL FA+ LAY+
Sbjct: 57  -----VKNHLLDMSLLNQLAPNALTRNDIEIEVKDGELPSTFVPGRNLVFLSFASILAYQ 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G  +I+ GVCETD+SGYPDCR + +++    +NL ME    +HTPLMWL K ETWKLA 
Sbjct: 112 IGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIHTPLMWLNKAETWKLAD 171

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           ++G  D V      + TCY G          GC  CPAC+LR KG+ E+
Sbjct: 172 ELGALDFVK---NNTLTCYNGI------IADGCGECPACHLRSKGYEEY 211


>gi|312863345|ref|ZP_07723583.1| protein ExsB [Streptococcus vestibularis F0396]
 gi|311100881|gb|EFQ59086.1| protein ExsB [Streptococcus vestibularis F0396]
          Length = 217

 Score =  176 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 100/231 (43%), Positives = 146/231 (63%), Gaps = 19/231 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WAL  ++ VE ++F YGQR+ +E+E    + ++       
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWALKHYETVELVTFAYGQRHSLEIEVAKEIAQEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H+L +++LG I+ ++LT ++ ++ ++  +PNTFV GRN +FL FAA LA + 
Sbjct: 57  -----LKHHVLDMSLLGQITENALTSDIEIEAEEGEVPNTFVDGRNHLFLSFAAVLAKQR 111

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GIT+I+ GVCETD+SGYPDCR   ++++   +NL M     + TPLMWL K ETW LA  
Sbjct: 112 GITDIITGVCETDFSGYPDCRDVFVKSLNVTLNLAMAYDFVIQTPLMWLDKAETWALADQ 171

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +G  D V    E++ TCY G        G GC  CPAC+LRQKG  ++  +
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGTGCGDCPACHLRQKGLEKYLAE 213


>gi|312278213|gb|ADQ62870.1| Putative ATPase, confers aluminum resistance [Streptococcus
           thermophilus ND03]
          Length = 217

 Score =  176 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 102/234 (43%), Positives = 147/234 (62%), Gaps = 19/234 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WAL  ++ VE ++F YGQR+ +E+E    + ++       
Sbjct: 2   KRQSALIVFSGGQDSTTCLFWALKHYEIVELVTFAYGQRHSLEIEVAKEIAQEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H+L +++LG I+ ++LT ++ ++ ++  +PNTFV GRN +FL FAA LA + 
Sbjct: 57  -----LKHHVLDMSLLGQITENALTSDIDIEAEEGEVPNTFVDGRNHLFLSFAAVLAKQR 111

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GIT+IV GVCETD+SGYPDCR   ++++   +NL M     + TPLMWL K ETW LA  
Sbjct: 112 GITDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMAYDFVIQTPLMWLDKAETWALADQ 171

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
           +G  D V    E++ TCY G        G GC  CPAC+LRQKG  ++  +  D
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGTGCGDCPACHLRQKGLEKYLAEKGD 216


>gi|328911421|gb|AEB63017.1| 7-cyano-7-deazaguanine synthase [Bacillus amyloliquefaciens LL3]
          Length = 227

 Score =  176 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 99/234 (42%), Positives = 149/234 (63%), Gaps = 22/234 (9%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           N++  K   A+++FSGGQDS+TCL WAL  F+ VET++F Y QR++ E++    + +K+ 
Sbjct: 7   NEM--KKEKAVVVFSGGQDSTTCLLWALQNFEEVETVTFHYNQRHQEEIDVAKSIAEKLG 64

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                      ++H+L +++L  ++ ++LT  ++ ++ +D  LP TFVPGRN++FL FA+
Sbjct: 65  ----------VKNHLLDMSLLNQLAPNALTRDDIEIEAKDGELPTTFVPGRNLVFLSFAS 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            LAY++G  +I+ GVCETD+SGYPDCR + +++    +NL ME    +HTPLMWL K ET
Sbjct: 115 ILAYQIGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIHTPLMWLNKAET 174

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           WKLA ++G  D V      + TCY G          GC  CPAC LR KG+ E+
Sbjct: 175 WKLADELGALDFVK---NNTLTCYNGI------IADGCGECPACLLRNKGYDEY 219


>gi|254490174|ref|ZP_05103365.1| exsB protein [Methylophaga thiooxidans DMS010]
 gi|224464660|gb|EEF80918.1| exsB protein [Methylophaga thiooxydans DMS010]
          Length = 223

 Score =  176 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 67/234 (28%), Positives = 107/234 (45%), Gaps = 24/234 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+T L+ A  +     T+SFDYGQR++ ELE    + K +     K  
Sbjct: 2   KRAVILLSGGLDSATVLAIAKSQGYDCYTISFDYGQRHRAELEASARLSKSLGATEHKVI 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +       + L  +G  + +  + +V  + ++      +VP RN +F+  A   A  L  
Sbjct: 62  N-------IDLTAIGGSALTDSSIDVPSQHEEGIPIT-YVPARNTVFMSIALGWAEVLNA 113

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
             I +GV   DYSGYPDCR D I A E   NL  ++ V      + TPL+ L K    + 
Sbjct: 114 QAIFVGVNAVDYSGYPDCRPDYIAAFEKMANLATKTGVEGLKLTIETPLIDLTKQAIIEK 173

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
              +G      +   ++ +CY          G  C  C +C  R++G+ +   +
Sbjct: 174 GIALG------VDYGQTVSCYQAD-----NQGRACGQCDSCRFRKQGFEKAGIE 216


>gi|310780052|ref|YP_003968384.1| preQ(0) biosynthesis protein QueC [Ilyobacter polytropus DSM 2926]
 gi|309749375|gb|ADO84036.1| preQ(0) biosynthesis protein QueC [Ilyobacter polytropus DSM 2926]
          Length = 222

 Score =  176 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 103/242 (42%), Positives = 148/242 (61%), Gaps = 23/242 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M +II K    +L+FSGGQDSST L WA  +F  V  LSF+YGQ++ +EL+C   + KK 
Sbjct: 1   MQNIIDK-DRCVLVFSGGQDSSTLLFWAKKKFKEVIALSFNYGQKHDLELQCAKDICKK- 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT---KNVAMKIQDNNLPNTFVPGRNIIFLV 117
                       E HIL + +L  ++ ++LT     V  +  +  LPNTFV GRN+IFL 
Sbjct: 59  ---------YDVEHHILDMGLLSQLAPNALTRTDIKVDKEAPEGGLPNTFVDGRNMIFLT 109

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
           FA+  A +  I +++ GV ++D+SGYPDCR   I++I T ++L M+    + TPLMWL K
Sbjct: 110 FASIFAKQRNINHVITGVSQSDFSGYPDCRDIFIKSISTTLSLAMDYQFVIDTPLMWLDK 169

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            ETWK+A D+G   ++++I  E+ TCY G        G GC  CPAC LR+ G++EFK K
Sbjct: 170 AETWKMADDLG---VLDIIKNETLTCYNGI------IGNGCGECPACKLRKNGYVEFKRK 220

Query: 238 YQ 239
           ++
Sbjct: 221 FK 222


>gi|262165605|ref|ZP_06033342.1| queuosine Biosynthesis QueC ATPase [Vibrio mimicus VM223]
 gi|262025321|gb|EEY43989.1| queuosine Biosynthesis QueC ATPase [Vibrio mimicus VM223]
          Length = 231

 Score =  176 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 97/226 (42%), Positives = 139/226 (61%), Gaps = 15/226 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  FD V  ++FDYGQR+K+E+E    + K++     K  
Sbjct: 2   KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQKLAKQLGVAAHKVM 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D      +  L  L   S +     V+ ++Q N LPN+FVPGRNI+FL  A   AY++G 
Sbjct: 62  D------VGLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQIGA 115

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++ GVCETD+SGYPDCR+D ++A+  A+  GM+  +T+ TPLMWL K ETW LA  +G
Sbjct: 116 ATVITGVCETDFSGYPDCRNDFVQAMNQALTKGMDMSLTIRTPLMWLNKAETWALADQLG 175

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
               ++L+  ++ TCY G        G GC  CPAC+LR+ G  ++
Sbjct: 176 A---LDLVRHQTLTCYNG------LIGDGCGECPACHLRKAGLNDY 212


>gi|170760165|ref|YP_001786978.1| exsB protein [Clostridium botulinum A3 str. Loch Maree]
 gi|254764325|sp|B1L1S2|QUEC_CLOBM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|169407154|gb|ACA55565.1| exsB protein [Clostridium botulinum A3 str. Loch Maree]
          Length = 219

 Score =  176 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 95/235 (40%), Positives = 143/235 (60%), Gaps = 22/235 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A+++FSGGQDS+TCL WA  +++ V  +SFDY Q++K+EL+C   + KK       
Sbjct: 2   NKEKAIVVFSGGQDSTTCLFWAKKKYEEVIAVSFDYNQKHKLELDCAKDICKK------- 54

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                 E HIL L +L  ++ +SLT+    V        +PN+FV GRN++FL F A  A
Sbjct: 55  ---YNVEHHILDLNLLNQLAPNSLTRQDITVDKSAPKEGVPNSFVDGRNLLFLSFVAVFA 111

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            + G+  I+ GV ++D+SGYPDCR   I+++   ++L M+    + TPLMW+ K ETWK+
Sbjct: 112 KQKGVNTIITGVSQSDFSGYPDCRAVFIKSLNVTLDLAMDYEFEIITPLMWINKAETWKM 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
           A D+G  D+V    EE+ TCY G +        GC  CPAC LR+KG++EF++++
Sbjct: 172 AYDLGVLDIVK---EETLTCYNGIK------ADGCGECPACKLRKKGYLEFEKQF 217


>gi|254482558|ref|ZP_05095797.1| exsB protein [marine gamma proteobacterium HTCC2148]
 gi|214037249|gb|EEB77917.1| exsB protein [marine gamma proteobacterium HTCC2148]
          Length = 224

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 78/242 (32%), Positives = 112/242 (46%), Gaps = 29/242 (11%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN+       A++L SGG DS+T L+ A  +     TLSFDYGQR++ EL     V   +
Sbjct: 1   MNE-----KRAVILVSGGLDSTTVLAMAKAQGYACYTLSFDYGQRHRAELFAAERVSVTL 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++  K          L L  +G  + +     V  + +   +P T+VP RN +FL  A 
Sbjct: 56  GDVEHKVV-------TLNLDSIGGSALTDSGIPVPEE-ETEGIPVTYVPARNTVFLSIAL 107

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWL 175
             A  LG  +I IGV   DYSGYPDCR D I A E   NL   + V      +HTPLM +
Sbjct: 108 GWAEVLGAQDIFIGVNAVDYSGYPDCRPDYISAFEVMANLATRAGVEGNRLGIHTPLMEM 167

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K +  +    +G      +    + +CY    +     G  C  C AC LR +G+ +  
Sbjct: 168 SKGDIIEAGLALG------VDYALTVSCYQATDE-----GLACGKCDACRLRSQGFRDAG 216

Query: 236 EK 237
            +
Sbjct: 217 VE 218


>gi|168180210|ref|ZP_02614874.1| ExsB protein [Clostridium botulinum NCTC 2916]
 gi|182669149|gb|EDT81125.1| ExsB protein [Clostridium botulinum NCTC 2916]
          Length = 216

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 97/231 (41%), Positives = 137/231 (59%), Gaps = 22/231 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A+++FSGGQDS+TCL WA  ++  V  +SFDY Q++K+EL+C   + KK       
Sbjct: 2   NKEKAIVVFSGGQDSTTCLFWAKKKYKEVIAVSFDYNQKHKLELDCAKDICKK------- 54

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                 E HIL L +L  ++ +SLT+    V        +PN+FV GRN++FL F A  A
Sbjct: 55  ---YNIEHHILDLNLLNQLAPNSLTRQDITVDKSAPKEGVPNSFVDGRNLLFLSFVAVFA 111

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            + GI  I+ GV ++D+SGYPDCR   I+++   +NL M+    + TPLMW+ K ETWK+
Sbjct: 112 KQKGINTIITGVSQSDFSGYPDCRDVFIKSLNVTLNLAMDYEFEIITPLMWINKAETWKM 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           A D+G  D+V    EE+ TCY G +        GC  CPAC LR+KG+ EF
Sbjct: 172 AYDLGVLDIVK---EETLTCYNGIK------ADGCGECPACKLRKKGYWEF 213


>gi|262171604|ref|ZP_06039282.1| queuosine Biosynthesis QueC ATPase [Vibrio mimicus MB-451]
 gi|261892680|gb|EEY38666.1| queuosine Biosynthesis QueC ATPase [Vibrio mimicus MB-451]
          Length = 231

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 97/226 (42%), Positives = 138/226 (61%), Gaps = 15/226 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  FD V  ++FDYGQR+K+E+E    + K++     K  
Sbjct: 2   KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQKLAKQLGVAAHKVM 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D      +  L  L   S +     V+  +Q N LPN+FVPGRNI+FL  A   AY++G 
Sbjct: 62  D------VGLLNELAISSLTRDDIPVSHDLQANGLPNSFVPGRNILFLTLAGIYAYQIGA 115

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++ GVCETD+SGYPDCR+D ++A+  A+  GM+  +T+ TPLMWL K ETW LA  +G
Sbjct: 116 ATVITGVCETDFSGYPDCRNDFVQAMNQALTKGMDMSLTIRTPLMWLNKAETWALADQLG 175

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
               ++L+  ++ TCY G        G GC  CPAC+LR+ G  ++
Sbjct: 176 A---LDLVRHQTLTCYNG------LIGDGCGECPACHLRKAGLNDY 212


>gi|116627683|ref|YP_820302.1| PP-loop superfamily ATPase [Streptococcus thermophilus LMD-9]
 gi|122267720|sp|Q03L16|QUEC_STRTD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|116100960|gb|ABJ66106.1| Predicted PP-loop superfamily ATPase [Streptococcus thermophilus
           LMD-9]
          Length = 217

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 101/234 (43%), Positives = 146/234 (62%), Gaps = 19/234 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WAL  ++ VE ++F YGQR+ +E+E    + ++       
Sbjct: 2   KRQSALIVFSGGQDSTTCLFWALKHYEIVELVTFAYGQRHSLEIEVAKEIAQEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H+L +++LG I+ ++LT ++ ++ ++  +PNTFV GRN +FL FAA LA + 
Sbjct: 57  -----LKHHVLDMSLLGQITENALTSDIDIEAEEGEVPNTFVDGRNHLFLSFAAVLAKQR 111

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI +IV GVCETD+SGYPDCR   ++++   +NL M     + TPLMWL K ETW LA  
Sbjct: 112 GIIDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMAYDFVIQTPLMWLDKAETWALADQ 171

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
           +G  D V    E++ TCY G        G GC  CPAC+LRQKG  ++  +  D
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGTGCGDCPACHLRQKGLEKYLAEKGD 216


>gi|282926575|ref|ZP_06334205.1| exsB protein [Staphylococcus aureus A10102]
 gi|282591468|gb|EFB96540.1| exsB protein [Staphylococcus aureus A10102]
          Length = 222

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 91/235 (38%), Positives = 147/235 (62%), Gaps = 20/235 (8%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +     A+++FSGGQDS+TCL +A   F  VE ++F+YGQR+  E+E    + +    
Sbjct: 2   ESVLNNEKAIVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDTEIEVAKQIAQ---- 57

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                 D   + H+L +++L  ++ ++LT  ++ +   ++ +PNTFVP RN++FL FA  
Sbjct: 58  ------DQGMKHHVLDMSLLSQLTPNALTQHDIEITNNEDGIPNTFVPARNLLFLSFAGA 111

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           LAY++G  +I+ GVCETD+SGYPDCR   I+++   ++L M+    +HTPLMWL K ETW
Sbjct: 112 LAYQIGAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLAMDKDFVIHTPLMWLNKAETW 171

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           KL+ ++   ++++ I  ++ TCY G        G GC  CPAC+LRQ+G  ++ E
Sbjct: 172 KLSDEL---EVLDYIRTKTLTCYNGI------IGDGCGECPACHLRQRGLNQYLE 217


>gi|224038929|gb|ACN38358.1| transcription regulator related protein [Micromonospora inyonensis]
          Length = 236

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 81/245 (33%), Positives = 114/245 (46%), Gaps = 29/245 (11%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M  +      A++L SGG DS+T L+ A+        LSF YGQR+ VELE    V K +
Sbjct: 1   MWRVPTGKRKAVVLLSGGLDSATVLAMAVHEGYEAHALSFRYGQRHTVELEAAARVAKAL 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK----IQDNNLPNTFVPGRNIIFL 116
                   D       + L + G  + +  T  V          + +P T+VP RN IFL
Sbjct: 61  GATRHVVAD-------IDLRVFGGSALTDDTLVVPHHASADEMGDEIPVTYVPARNTIFL 113

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHT 170
            FA   A  L  ++I IGV   DYSGYPDCR + + A ET  NL  ++ V       +HT
Sbjct: 114 SFALAWAETLDASDIFIGVSALDYSGYPDCRPEYVAAYETMANLATKAGVEGRQRLRIHT 173

Query: 171 PLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
           PL+ L K ET +   ++G      +    +H+CY          G  C +C +C LR +G
Sbjct: 174 PLIQLTKAETIRRGLEMG------VDYAWTHSCYDPVD------GRACGTCDSCLLRGRG 221

Query: 231 WMEFK 235
           + E  
Sbjct: 222 FAELG 226


>gi|321315127|ref|YP_004207414.1| pre-queuosine 0 synthase [Bacillus subtilis BSn5]
 gi|320021401|gb|ADV96387.1| pre-queuosine 0 synthase [Bacillus subtilis BSn5]
          Length = 219

 Score =  175 bits (444), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 99/229 (43%), Positives = 149/229 (65%), Gaps = 20/229 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WAL  F+ VET++F Y QR+  E+E    + +K+      
Sbjct: 2   KKEKAIVVFSGGQDSTTCLLWALKEFEEVETVTFHYNQRHSQEIEVAKSIAEKLG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 ++H+L +++L  ++ ++LT+ ++ ++++D  LP+TFVPGRN++FL FA+ LAY+
Sbjct: 57  -----VKNHLLDMSLLNQLAPNALTRNDIEIEVKDGELPSTFVPGRNLVFLSFASILAYQ 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G  +I+ GVCETD+SGYPDCR + +++    +NL ME    +HTPLMWL K ETWKLA 
Sbjct: 112 IGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIHTPLMWLNKAETWKLAD 171

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           ++G  D V      + TCY G          GC  CPAC+LR KG+ E+
Sbjct: 172 ELGALDFVK---NNTLTCYNGI------IADGCGECPACHLRSKGYEEY 211


>gi|288556799|ref|YP_003428734.1| Queuosine biosynthesis protein QueC [Bacillus pseudofirmus OF4]
 gi|288547959|gb|ADC51842.1| Queuosine biosynthesis protein QueC [Bacillus pseudofirmus OF4]
          Length = 222

 Score =  175 bits (444), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 96/230 (41%), Positives = 139/230 (60%), Gaps = 21/230 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WAL  F  V T++FDYGQR+  E+EC   +  ++      
Sbjct: 2   KQDKAVVVFSGGQDSTTCLFWALKEFKEVATVTFDYGQRHSKEIECARKIADELG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKI--QDNNLPNTFVPGRNIIFLVFAATLAY 124
                   H+L + +L  +S ++LT+         D  LP+TFV GRN++FL FAA    
Sbjct: 57  -----VSFHVLDMGLLNQLSPNALTRADIEVEAGDDGELPSTFVEGRNLLFLSFAAIYGK 111

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++G  +I+ GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMWL K +TWKLA
Sbjct: 112 QIGAKHIITGVCETDFSGYPDCRDIFVKSLNVTLNLSMDDQFVIHTPLMWLNKEQTWKLA 171

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            D+G    ++ + E++ TCY G        G GC  CPAC LR+KG  ++
Sbjct: 172 DDLGA---LSFVREKTLTCYNGI------IGDGCGECPACVLRKKGLDDY 212


>gi|91776687|ref|YP_546443.1| ExsB [Methylobacillus flagellatus KT]
 gi|118574290|sp|Q1GYT5|QUEC_METFK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|91710674|gb|ABE50602.1| preQ(0) biosynthesis protein QueC [Methylobacillus flagellatus KT]
          Length = 229

 Score =  175 bits (444), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 28/241 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +  A++L SGG DS+T L+ A  +   V  LS DY QR++ EL+    V K +  +M +
Sbjct: 1   MSKKAVVLLSGGLDSATVLAIARHQGYDVYCLSLDYQQRHRAELQAADRVTKALGAVMHR 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     L L++ G  + +  +  V     +      +VP RN I L  A   A  L
Sbjct: 61  TVK-------LDLSVFGGSALTDASIAVPEVPSEGIPVT-YVPARNTIMLSLALAWAEVL 112

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETW 181
              +I IGV   DYSGYPDCR + + A +   NL  +       + +H PL+ + K +  
Sbjct: 113 EARDIFIGVNALDYSGYPDCRGEYVHAFQAMANLATKSAVEGRTIAIHAPLIDMTKADIV 172

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EK 237
                +G      +    + +CY    +     G  C  C +C LR++G++        +
Sbjct: 173 TQGTSLG------VDYSLTVSCYQADDE-----GRACGVCDSCRLRRQGFVAAGLADPTR 221

Query: 238 Y 238
           Y
Sbjct: 222 Y 222


>gi|85813930|emb|CAF31559.1| putative fortimicin production protein; unknown ATP/GTP-binding
           protein [Micromonospora olivasterospora]
          Length = 233

 Score =  175 bits (444), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 78/242 (32%), Positives = 113/242 (46%), Gaps = 29/242 (11%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  +   A++L SGG DS+T L+ A+        LSF YGQR+ VEL+    V K +   
Sbjct: 1   MPTEKRKAVVLLSGGLDSATVLAMAVHEGYEAHALSFRYGQRHTVELKAAARVAKALGAT 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN----LPNTFVPGRNIIFLVFA 119
                D       + L + G  + +  +  V      +     +P T+VP RN IFL FA
Sbjct: 61  RHVVAD-------IDLRVFGGSALTDDSLAVPHHASADELGGDIPVTYVPARNTIFLSFA 113

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLM 173
              A  L  ++I IGV   DYSGYPDCR + I A E   NL  ++ V       +HTPL+
Sbjct: 114 LAWAETLDASDIFIGVSALDYSGYPDCRPEYIAAYEAMANLATKAGVEGRQRLRIHTPLI 173

Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
            L K ET +   ++G      +    +H+CY          G  C +C +C LR +G+ E
Sbjct: 174 QLTKAETIRRGLELG------VDYAWTHSCYDPVD------GRACGTCDSCLLRGRGFAE 221

Query: 234 FK 235
             
Sbjct: 222 LG 223


>gi|289551433|ref|YP_003472337.1| Queuosine Biosynthesis QueC ATPase [Staphylococcus lugdunensis
           HKU09-01]
 gi|315658942|ref|ZP_07911809.1| transcription regulator ExsB [Staphylococcus lugdunensis M23590]
 gi|289180964|gb|ADC88209.1| Queuosine Biosynthesis QueC ATPase [Staphylococcus lugdunensis
           HKU09-01]
 gi|315496066|gb|EFU84394.1| transcription regulator ExsB [Staphylococcus lugdunensis M23590]
          Length = 223

 Score =  175 bits (444), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 91/235 (38%), Positives = 144/235 (61%), Gaps = 20/235 (8%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M +       A+++FSGGQDS+TCL +A   FD VE ++F+YGQR+  E+E    +  + 
Sbjct: 1   MTETTLNNNKAIVVFSGGQDSTTCLFYAKKHFDEVELVTFNYGQRHNTEIEVAKSIAHEQ 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                         HIL +++L  ++ ++LT  ++ ++  D+ +PNTFVP RN++FL FA
Sbjct: 61  G----------LAHHILDMSLLSQLTPNALTQHDMKIETNDDGMPNTFVPARNLLFLSFA 110

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
             LAY+L   +I+ GVCETD+SGYPDCR + I+++   ++L M+    +HTPLMWL K +
Sbjct: 111 GALAYQLNAKHIITGVCETDFSGYPDCRDNFIKSMNVTLSLAMDKDFVIHTPLMWLNKAQ 170

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           TW L+ ++G   +++ I  ++ TCY G        G GC  CPAC+LR +G  ++
Sbjct: 171 TWALSDELG---VLDYIRHQTLTCYNGI------IGDGCGECPACHLRARGLQQY 216


>gi|56476932|ref|YP_158521.1| ExsB protein [Aromatoleum aromaticum EbN1]
 gi|81357766|sp|Q5P4Z2|QUEC_AZOSE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|56312975|emb|CAI07620.1| similar to queC gene product; involved in queuosine biosynthesis
           [Aromatoleum aromaticum EbN1]
          Length = 226

 Score =  175 bits (444), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 68/237 (28%), Positives = 104/237 (43%), Gaps = 23/237 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + +   A++L SGG DS+TCL+ A +       LS  YGQR+  EL     V + +    
Sbjct: 1   MTEPKRAIVLLSGGLDSATCLAIARNAGFDCYALSIAYGQRHTAELAAARRVAQSLDARE 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            +          + L   G  + +  +  V ++     +P T+VP RN + L  A   A 
Sbjct: 61  HRLAH-------VSLGEFGGSALTDSSIPVPIEGAVGGIPVTYVPARNTVMLSIALAWAE 113

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYE 179
            LG  +I +GV   DYSGYPDCR + I A E   NL  +     + +T+H PL+ L K  
Sbjct: 114 VLGAHDIYVGVNAVDYSGYPDCRPEFIAAFEAMANLATKAGIEGARITIHAPLIRLSKAG 173

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
             +    +G      +   ++ +CY          G  C  C AC LR+ G+     
Sbjct: 174 IIQRGTALG------VDYAQTVSCYQADEA-----GRACGVCDACRLRKAGFEAAGI 219


>gi|262404008|ref|ZP_06080563.1| queuosine Biosynthesis QueC ATPase [Vibrio sp. RC586]
 gi|262349040|gb|EEY98178.1| queuosine Biosynthesis QueC ATPase [Vibrio sp. RC586]
          Length = 231

 Score =  175 bits (444), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 97/229 (42%), Positives = 139/229 (60%), Gaps = 15/229 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  FD V  ++FDYGQR+K+E+E    + K++     K  
Sbjct: 2   KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEIAQKLAKQLGVTAHKVM 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D      +  L  L   S +     V+ ++Q N LPN+FVPGRNI+FL  A   AY++G 
Sbjct: 62  D------VNLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQIGA 115

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++ GVCETD+SGYPDCR+D ++++  A+  GM+  + + TPLMWL K +TW LA  +G
Sbjct: 116 DTVITGVCETDFSGYPDCRNDFVQSMNQALAKGMDMSLNIRTPLMWLNKAQTWALADQLG 175

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
               + L+ +++ TCY G        G GC  CPAC+LRQ G  E+ E 
Sbjct: 176 A---LELVRKQTLTCYNG------LIGDGCGECPACHLRQAGLNEYLEN 215


>gi|89094846|ref|ZP_01167779.1| ExsB [Oceanospirillum sp. MED92]
 gi|89080901|gb|EAR60140.1| ExsB [Oceanospirillum sp. MED92]
          Length = 227

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 75/248 (30%), Positives = 108/248 (43%), Gaps = 30/248 (12%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN        A++L SGG DS+T L+ A DR      LSFDYGQR+  EL     + K++
Sbjct: 1   MN--TSAGKKAVVLLSGGLDSATALAMAADRGYDCYVLSFDYGQRSLTELNAAKEIAKQL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                +          L L   G  + +  + +V  +  D+     +VP RN +FL  A 
Sbjct: 59  NAREHRV-------IRLHLEDFGGSALTDHSIDVPEEETDDIPVT-YVPARNTVFLSLAL 110

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWL 175
             A  L   +I IGV   DYSGYPDCR + I A ET  NL  +       + + TPL+ L
Sbjct: 111 GWAEVLEADSIFIGVNAVDYSGYPDCRPEYIAAFETMANLATKRGVNGDPIKIETPLIDL 170

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K    +    +G      +    + +CY          G  C +C +C LR  G+ +  
Sbjct: 171 TKEAIIQEGTRLG------VDYGLTVSCYQADDS-----GRACGNCDSCRLRALGFTDAG 219

Query: 236 ----EKYQ 239
                +YQ
Sbjct: 220 LEDPTRYQ 227


>gi|295703391|ref|YP_003596466.1| queuosine biosynthesis protein QueC [Bacillus megaterium DSM 319]
 gi|294801050|gb|ADF38116.1| queuosine biosynthesis protein QueC [Bacillus megaterium DSM 319]
          Length = 221

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 91/231 (39%), Positives = 139/231 (60%), Gaps = 20/231 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K   A+++FSGGQDS+TCL WAL  F  VET++F YGQR+  E+E    +   +    
Sbjct: 1   MMKNEKAIVVFSGGQDSTTCLFWALKNFKEVETVTFQYGQRHSQEIEVAKAIAADLG--- 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                   +  +L +++L  ++ ++LT  ++ ++ ++  LP TFV GRN++FL FAA LA
Sbjct: 58  -------VKHTVLDMSLLNQLAPNALTRDDIEIEQKEGELPTTFVDGRNLLFLSFAAVLA 110

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              G  +IV GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K ETW L
Sbjct: 111 KNSGGRHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDFEFVIHTPLMWIDKAETWAL 170

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           A ++G    +  + E++ TCY G          GC  CPAC LR++G  ++
Sbjct: 171 ADELGA---LEYVREKTLTCYNGIV------ADGCGECPACQLRKRGLDQY 212


>gi|302558409|ref|ZP_07310751.1| exsB protein [Streptomyces griseoflavus Tu4000]
 gi|302476027|gb|EFL39120.1| exsB protein [Streptomyces griseoflavus Tu4000]
          Length = 231

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 75/247 (30%), Positives = 111/247 (44%), Gaps = 32/247 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T L+ A D+      LSF YGQR+ +ELE    V +        
Sbjct: 1   MDRPAIVLLSGGLDSTTVLAIAKDQGFTPYALSFRYGQRHSIELEAAKRVAEVQGVARHV 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVA----MKIQDNNLPNTFVPGRNIIFLVFAATL 122
             D       + L + G  + ++  +         ++D  +P T+VP RN IFL FA   
Sbjct: 61  IAD-------IDLRVFGGSALTADIEVPKHESLDDVEDGGVPITYVPARNTIFLSFALAF 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME------SHVTVHTPLMWLK 176
           A  +G ++I  GV   DYSGYPDCR + + A  T  NL         S +T+H+PL+ + 
Sbjct: 114 AETVGASDIFTGVTAVDYSGYPDCRPEYMDAFATMANLATRAGVEGISRMTLHSPLIAMS 173

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK- 235
           K +  +    +G      +    + +CY          G  C  C  C LR KG+ E   
Sbjct: 174 KADIVREGLRLG------VDYSLTSSCYNPDD-----QGQACGKCDTCLLRLKGFAEAGV 222

Query: 236 ---EKYQ 239
               +YQ
Sbjct: 223 TDPVRYQ 229


>gi|308173343|ref|YP_003920048.1| QueC [Bacillus amyloliquefaciens DSM 7]
 gi|189039060|sp|A7Z3Y6|QUEC_BACA2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|307606207|emb|CBI42578.1| QueC [Bacillus amyloliquefaciens DSM 7]
 gi|328553730|gb|AEB24222.1| QueC [Bacillus amyloliquefaciens TA208]
          Length = 219

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 98/229 (42%), Positives = 146/229 (63%), Gaps = 20/229 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WAL  F+ VET++F Y QR++ E++    + +K+      
Sbjct: 2   KKEKAVVVFSGGQDSTTCLLWALQNFEEVETVTFHYNQRHQEEIDVAKSIAEKLG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 ++H+L +++L  ++ ++LT  ++ ++ +D  LP TFVPGRN++FL FA+ LAY+
Sbjct: 57  -----VKNHLLDMSLLNQLAPNALTRDDIEIEAKDGELPTTFVPGRNLVFLSFASILAYQ 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G  +I+ GVCETD+SGYPDCR + +++    +NL ME    +HTPLMWL K ETWKLA 
Sbjct: 112 IGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIHTPLMWLNKAETWKLAD 171

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           ++G  D V      + TCY G          GC  CPAC LR KG+ E+
Sbjct: 172 ELGALDFVK---NNTLTCYNGI------IADGCGECPACLLRNKGYDEY 211


>gi|53712758|ref|YP_098750.1| putative aluminum resistance protein [Bacteroides fragilis YCH46]
 gi|52215623|dbj|BAD48216.1| putative aluminum resistance protein [Bacteroides fragilis YCH46]
          Length = 220

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 94/233 (40%), Positives = 129/233 (55%), Gaps = 16/233 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K  SA++LFSGGQDS+TCL WA   F +V  LSF YGQ++  E+E    + ++     
Sbjct: 1   MMKNDSAVVLFSGGQDSTTCLFWAKKHFKKVYALSFLYGQKHAHEVELARGIAERAGVEF 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                S        +  LG  S +  + ++      ++ PNTFVPGRN+ FL  AA  A 
Sbjct: 61  HVMDTSF-------IGSLGSNSLTDTSISMDEDKPKDSFPNTFVPGRNLFFLSIAAVFAR 113

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G  ++V GV +TDYSGYPDCR   I+++   +NL M+    +HTPLMW+ K ETW LA
Sbjct: 114 EQGAFHLVTGVSQTDYSGYPDCRDSFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWALA 173

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            ++G  DLV     E+ TCY G          GC  CPAC LR++G  E+  K
Sbjct: 174 DELGVFDLVR---NETLTCYNGIP------ADGCGHCPACKLRKQGLEEYLSK 217


>gi|296329698|ref|ZP_06872183.1| pre-queuosine 0 synthase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305674095|ref|YP_003865767.1| pre-queuosine 0 synthase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296153196|gb|EFG94060.1| pre-queuosine 0 synthase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305412339|gb|ADM37458.1| pre-queuosine 0 synthase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 219

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 99/229 (43%), Positives = 149/229 (65%), Gaps = 20/229 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WAL  F+ VET++F Y QR+  E+E    + +K+      
Sbjct: 2   KKEKAIVVFSGGQDSTTCLLWALKEFEEVETVTFHYNQRHSQEIEVAKSIAEKLG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 ++H+L +++L  ++ ++LT+ ++ ++++D  LP+TFVPGRN++FL FA+ LAY+
Sbjct: 57  -----VKNHLLDMSLLNQLAPNALTRNDIDIEVKDGELPSTFVPGRNLVFLSFASILAYQ 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G  +I+ GVCETD+SGYPDCR + +++    +NL ME    +HTPLMWL K ETWKLA 
Sbjct: 112 IGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIHTPLMWLNKAETWKLAD 171

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           ++G  D V      + TCY G          GC  CPAC+LR KG+ E+
Sbjct: 172 ELGALDFVK---NNTLTCYNGI------IADGCGECPACHLRSKGYEEY 211


>gi|331007034|ref|ZP_08330268.1| Queuosine Biosynthesis QueC ATPase [gamma proteobacterium IMCC1989]
 gi|330419161|gb|EGG93593.1| Queuosine Biosynthesis QueC ATPase [gamma proteobacterium IMCC1989]
          Length = 243

 Score =  175 bits (443), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 77/233 (33%), Positives = 109/233 (46%), Gaps = 24/233 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DS+T L+ A  +     TLSFDYGQR++ EL     +  K+     K   
Sbjct: 24  RAVILVSGGLDSTTVLAIAQSQGYDCYTLSFDYGQRHRAELVAAERLSLKMGAKEHKTV- 82

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 IL L  +G  + +    +V     +      +VP RN +FL  A   A  LG  
Sbjct: 83  ------ILDLRTIGGSALTDDAIDVPESASEGIPVT-YVPARNTVFLSIALGWAEVLGAN 135

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKLA 184
           +I IGV   DYSGYPDCR D I+A E   NL  ++ V      + TPL+ L K E  +  
Sbjct: 136 DIFIGVNAVDYSGYPDCRLDYIKAYEQMANLATKACVEGRPLRIQTPLIDLSKAEIIRQG 195

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            ++G      +   E+ +CY          G  C  C +C LRQ+G+ E   +
Sbjct: 196 VELG------IDYAETISCYQA-----NADGDACGKCDSCRLRQQGFAEAGTE 237


>gi|323488451|ref|ZP_08093698.1| aluminum resistance protein [Planococcus donghaensis MPA1U2]
 gi|323397958|gb|EGA90757.1| aluminum resistance protein [Planococcus donghaensis MPA1U2]
          Length = 221

 Score =  175 bits (443), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 89/232 (38%), Positives = 139/232 (59%), Gaps = 20/232 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WA+  F  V T++FDYGQR+  E+EC   +  ++  L   
Sbjct: 2   KNEKAVVVFSGGQDSTTCLFWAIKNFKEVATVTFDYGQRHSAEIECARKIADELGVLF-- 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    +L + ++  +S ++LT  ++ +  ++  LP+TFVPGRN++FL FAA  A  
Sbjct: 60  --------KVLDMTLINQLSANALTRDDIEVTAEEGELPSTFVPGRNLLFLSFAAVYADA 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G  +++ GV +TD+SGYPDCR   IR++   +NL M+    +HTPLMWL K + W+L+ 
Sbjct: 112 IGSRHLITGVSQTDFSGYPDCRDTFIRSLNVTLNLSMDKQFIIHTPLMWLDKADVWELSD 171

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            +G    ++ + E++ TCY G          GC  CPAC LR +G   ++ K
Sbjct: 172 TLGA---LDFVQEKTLTCYNGIPS------TGCGECPACQLRNEGLARYQAK 214


>gi|118579716|ref|YP_900966.1| exsB protein [Pelobacter propionicus DSM 2379]
 gi|171704444|sp|A1ANI8|QUEC_PELPD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|118502426|gb|ABK98908.1| preQ(0) biosynthesis protein QueC [Pelobacter propionicus DSM 2379]
          Length = 226

 Score =  175 bits (443), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 74/237 (31%), Positives = 110/237 (46%), Gaps = 29/237 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L+SGG DS+TCL+ A         +SF YGQR+  ELE      + +  +   
Sbjct: 1   MEKRAVVLYSGGLDSTTCLAMAKADGFAPYAMSFSYGQRHGFELEVAKANARPLGAV--- 57

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT--FVPGRNIIFLVFAATLAY 124
                  +H++    L  +  S+LT ++++  +         +VP RN IFL FA   A 
Sbjct: 58  -------EHLVVDFDLRRMGGSALTDDISVPKEGVGSDIPVTYVPARNTIFLSFALGWAE 110

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM------ESHVTVHTPLMWLKKY 178
            LG  +I IGV   DYSGYPDCR + + A E   NL        + H ++ TPL+ + K 
Sbjct: 111 VLGAFDIYIGVNSLDYSGYPDCRPEFVSAFEALANLATKSGVEGQGHFSIRTPLINMTKA 170

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           E  K    +G      +    +H+CY  +       G  C  C +C LR KG+ E  
Sbjct: 171 EIIKAGVALG------VDYSWTHSCYDPE-----SDGTSCGRCDSCRLRLKGFAEAG 216


>gi|258621537|ref|ZP_05716570.1| ExsB protein [Vibrio mimicus VM573]
 gi|258586155|gb|EEW10871.1| ExsB protein [Vibrio mimicus VM573]
          Length = 231

 Score =  175 bits (443), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 97/226 (42%), Positives = 138/226 (61%), Gaps = 15/226 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  FD V  ++FDYGQR+K+E+E    + K++     K  
Sbjct: 2   KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQKLAKQLGVAAHKVM 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D      +  L  L   S +     V+  +Q N LPN+FVPGRNI+FL  A   AY++G 
Sbjct: 62  D------VGLLNELAISSLTRDDIPVSHDLQANGLPNSFVPGRNILFLTLAGIYAYQIGA 115

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++ GVCETD+SGYPDCR+D ++A+  A+  GM+  +T+ TPLMWL K ETW LA  +G
Sbjct: 116 ATVITGVCETDFSGYPDCRNDFVQAMNQALTKGMDMSLTIRTPLMWLNKAETWALADQLG 175

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
               ++L+  ++ TCY G        G GC  CPAC+LR+ G  ++
Sbjct: 176 A---LDLVRHQTLTCYNG------LIGDGCGECPACHLRKSGLNDY 212


>gi|148266057|ref|YP_001232763.1| exsB protein [Geobacter uraniireducens Rf4]
 gi|189038915|sp|A5G8S2|QUEC_GEOUR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|146399557|gb|ABQ28190.1| preQ(0) biosynthesis protein QueC [Geobacter uraniireducens Rf4]
          Length = 228

 Score =  175 bits (443), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 79/235 (33%), Positives = 113/235 (48%), Gaps = 25/235 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L+SGG DS+TC++ A         +SF YGQR+K ELE      K +  +   
Sbjct: 1   MPKKAVILYSGGLDSTTCMAIAKAEGFEPYAMSFAYGQRHKAELELAKGNAKPMGAVEHM 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +         L  +G  + ++   +V  +   N++P T+VP RN IFL FA   A  L
Sbjct: 61  VVE-------FDLRKMGGSALTA-EIDVPKEGVGNDIPVTYVPARNTIFLSFALGWAETL 112

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES------HVTVHTPLMWLKKYET 180
           G  +I IGV   DYSGYPDCR + I A ET  NL  ++        T+HTPL+ L K E 
Sbjct: 113 GAFDIFIGVNALDYSGYPDCRPEYIAAFETMANLATKAGVEGAGRFTIHTPLIHLTKAEI 172

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            +    +G      +    +H+CY    D+       C  C +C LR KG+ E  
Sbjct: 173 IRKGLSLG------VDYGRTHSCYDPTADE-----LACGRCDSCRLRLKGFAEAG 216


>gi|75759341|ref|ZP_00739438.1| Queuosine biosynthesis protein QueC [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74493173|gb|EAO56292.1| Queuosine biosynthesis protein QueC [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 224

 Score =  175 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 92/241 (38%), Positives = 152/241 (63%), Gaps = 23/241 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+++  K   A+++FSGGQDS+TCL WA+++F  VE ++F+Y QR+K+E++C   + K++
Sbjct: 1   MSEM--KKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAKIAKEL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                       +  +L +++L  ++ ++LT  ++ +  ++  LP+TFV GRN++FL FA
Sbjct: 59  G----------IKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFA 108

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIE-TAINLGMESHVTVHTPLMWLKKY 178
           A LA ++G  +IV GVCETD+SGYPDCR   ++++  T  N+ M+    +HTPLMW+ K 
Sbjct: 109 AVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTFXNISMDYPFVIHTPLMWIDKA 168

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
           ETWKL+ ++G  + V    E++  CY G        G GC  CPAC LR+ G   + ++ 
Sbjct: 169 ETWKLSDELGAFEFVR---EKTLACYNGI------IGDGCGECPACQLRKAGLDTYLQER 219

Query: 239 Q 239
           +
Sbjct: 220 E 220


>gi|225025884|ref|ZP_03715076.1| hypothetical protein EUBHAL_00112 [Eubacterium hallii DSM 3353]
 gi|224956781|gb|EEG37990.1| hypothetical protein EUBHAL_00112 [Eubacterium hallii DSM 3353]
          Length = 221

 Score =  175 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 96/237 (40%), Positives = 141/237 (59%), Gaps = 23/237 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M ++ K   +A+++FSGGQDS+TCL WAL R+ +V  LSFDY Q++  ELEC   + +  
Sbjct: 1   MQEL-KNKDAAVVVFSGGQDSTTCLFWALKRYKKVIALSFDYHQKHVKELECAKKICR-- 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT---KNVAMKIQDNNLPNTFVPGRNIIFLV 117
                   D   E HI+ +++L  ++ +SLT     V     +   PN+FV GRN++FL 
Sbjct: 58  --------DHEVEHHIMDMSLLNQLAPNSLTRVDIKVDESAPEEGTPNSFVDGRNLLFLS 109

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
           +AA  A + GIT+I+ GV ++D+SGYPDCR   I+++ T + L M+    + TPLMWL K
Sbjct: 110 YAAVFAKQRGITDIITGVSQSDFSGYPDCRDMFIKSLNTTLCLAMDYQFDIITPLMWLDK 169

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            ETW LA ++G     ++I  E+ TCY G        G GC  CP+C LR+KG   +
Sbjct: 170 KETWALADELGAF---DIIRNETLTCYNGI------IGDGCGHCPSCKLRKKGLDAY 217


>gi|153876460|ref|ZP_02003770.1| ExsB family protein [Beggiatoa sp. PS]
 gi|152067076|gb|EDN66230.1| ExsB family protein [Beggiatoa sp. PS]
          Length = 225

 Score =  175 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 72/240 (30%), Positives = 107/240 (44%), Gaps = 27/240 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+T L+ A  +      LSFDYGQR+++EL+    V + +  +  K+ 
Sbjct: 2   KKAVILVSGGLDSTTTLAIAKSQGYACYALSFDYGQRHRIELQAARQVAEHLGVVEHKFI 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   + L  +G  + +    NV  +   + +P T+VP RN +FL  A   A  L  
Sbjct: 62  H-------INLDSIGGSALTDTQINVPTQGLSDQIPITYVPARNTVFLALALGWAEVLSA 114

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKL 183
            +I IGV   DYSGYPDCR   + A E   N   +         +HTPL+ L K +  + 
Sbjct: 115 YHIFIGVNAVDYSGYPDCRPKFVEAFEQLANFATKAGVEGHSFKIHTPLIHLTKAQIIQE 174

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME----FKEKYQ 239
              +G      +    + +CY          GY C  C AC LR  G+         +Y 
Sbjct: 175 GLRLG------VDYNLTISCYQP-----NPNGYACGMCDACRLRADGFSRLDVPDPTQYH 223


>gi|220935393|ref|YP_002514292.1| ExsB ATPase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996703|gb|ACL73305.1| ExsB ATPase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 229

 Score =  175 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 72/245 (29%), Positives = 109/245 (44%), Gaps = 28/245 (11%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +     +A++L SGG DS+T L+ A ++      LSF YGQR++ EL+    V K    +
Sbjct: 1   MSSAQRNAVVLLSGGMDSATVLAIAREQGYVCHALSFRYGQRHRAELDAAARVAKSQGAV 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
             +  D       L L++ G  + +    ++     +      +VP RN +FL  A   A
Sbjct: 61  RHQVVD-------LDLSLFGGSALTDSRIDLPETPSEGIPVT-YVPARNTVFLSVALAWA 112

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKY 178
             L   +I IGV   DYSGYPDCR   I A E   NL   + V      +H PL +L K 
Sbjct: 113 EVLPARDIFIGVNAVDYSGYPDCRPAFIEAFERLANLATRAGVEGRQLSIHAPLQYLSKA 172

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK--- 235
           +  +   ++G      +   E+ TCY          G  C  C AC LR +G+ +     
Sbjct: 173 DIIRRGTELG------VDFAETVTCYGADAK-----GLACGVCDACRLRAQGFADAGLPD 221

Query: 236 -EKYQ 239
             +Y+
Sbjct: 222 VTRYR 226


>gi|212639795|ref|YP_002316315.1| putative PP-loop superfamily ATPase [Anoxybacillus flavithermus
           WK1]
 gi|254764299|sp|B7GLA4|QUEC_ANOFW RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|212561275|gb|ACJ34330.1| Predicted PP-loop superfamily ATPase [Anoxybacillus flavithermus
           WK1]
          Length = 221

 Score =  175 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 91/229 (39%), Positives = 143/229 (62%), Gaps = 20/229 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WA   F  VE ++FDY QR+++E++    + K++      
Sbjct: 2   KKEKAVVVFSGGQDSTTCLFWAKKHFAEVEAVTFDYNQRHRLEIDVAASIAKELN----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    +L +++L  ++ ++LT+ ++A++ ++  LP+TFV GRN++FL FAA LA +
Sbjct: 57  -----VSHTVLDMSLLHQLAPNALTRSDIAIEQKEGQLPSTFVDGRNLLFLSFAAVLAKQ 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G  ++V GVCETD+SGYPDCR   I+++   +NL M+    +HTPLMWL K ETWKLA 
Sbjct: 112 KGARHLVTGVCETDFSGYPDCRDVFIKSLNVTLNLAMDYQFVIHTPLMWLNKAETWKLAD 171

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           ++G    +  +  ++ TCY G          GC  CPAC LR++G  ++
Sbjct: 172 ELGA---LEFVRNKTLTCYNGI------IADGCGECPACVLRKRGLDQY 211


>gi|41019306|gb|AAR98564.1| GntR [Micromonospora echinospora]
 gi|85814031|emb|CAF31447.1| putative gentamicin production protein [Micromonospora echinospora]
          Length = 245

 Score =  175 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 81/244 (33%), Positives = 114/244 (46%), Gaps = 29/244 (11%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
             +  +   A++L SGG DS+T L+ A+        LSF YGQR+ VELE    V K + 
Sbjct: 11  RRVPTEKRRAVVLLSGGLDSATVLAMAVHEGYEAHALSFRYGQRHTVELEAAARVAKALG 70

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ----DNNLPNTFVPGRNIIFLV 117
                  D       + L + G  + +  T  V          + +P T+VP RN IFL 
Sbjct: 71  ATRHVVAD-------IDLRVFGGSALTDDTLAVPHHDSADELGDEIPVTYVPARNTIFLS 123

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTP 171
           FA   A  L  ++I IGV   DYSGYPDCR + + A ET  NL  ++ V       +HTP
Sbjct: 124 FALAWAETLDASDIFIGVSALDYSGYPDCRPEYVAAYETMANLATKAGVEGRQRLRIHTP 183

Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
           L+ L K ET +   ++G      +    +H+CY          G  C SC +C LR +G+
Sbjct: 184 LIQLTKAETIRRGLELG------VDYAWTHSCYDPVD------GRACGSCDSCLLRGRGF 231

Query: 232 MEFK 235
            E  
Sbjct: 232 AELG 235


>gi|311067886|ref|YP_003972809.1| YkvJ protein [Bacillus atrophaeus 1942]
 gi|310868403|gb|ADP31878.1| YkvJ [Bacillus atrophaeus 1942]
          Length = 219

 Score =  175 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 97/229 (42%), Positives = 147/229 (64%), Gaps = 20/229 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WAL  F+ VET++F Y QR++ E++    + +++      
Sbjct: 2   KKEKAIVVFSGGQDSTTCLLWALKEFEEVETVTFHYNQRHQQEIDVAKAIAEELG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 ++H+L +++L  ++ ++LT  ++ ++ +D  LP+TFVPGRN++FL FA+ LAY+
Sbjct: 57  -----VKNHLLDMSLLNQLAPNALTRDDIKIEAKDGELPSTFVPGRNLVFLSFASILAYQ 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G  +I+ GVCETD+SGYPDCR + +++    +NL ME    +HTPLMWL K ETWKLA 
Sbjct: 112 IGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIHTPLMWLNKAETWKLAD 171

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           ++G  D V      + TCY G          GC  CPAC LR KG+ E+
Sbjct: 172 ELGALDFVK---NNTLTCYNGI------IADGCGECPACLLRNKGYEEY 211


>gi|258627552|ref|ZP_05722329.1| ExsB protein [Vibrio mimicus VM603]
 gi|258580134|gb|EEW05106.1| ExsB protein [Vibrio mimicus VM603]
          Length = 231

 Score =  175 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 97/226 (42%), Positives = 139/226 (61%), Gaps = 15/226 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  FD V  ++FDYGQR+K+E+E    + K++     K  
Sbjct: 2   KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQKLAKQLGVAAHKVM 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D      +  L  L   S +     V+ ++Q N LPN+FVPGRNI+FL  A   AY++G 
Sbjct: 62  D------VGLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQIGA 115

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++ GVCETD+SGYPDCR+D ++A+  A+  GM+  +T+ TPLMWL K ETW LA  +G
Sbjct: 116 ATVITGVCETDFSGYPDCRNDFVQAMNQALTKGMDMSLTIRTPLMWLNKAETWALADQLG 175

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
               ++L+  ++ TCY G        G GC  CPAC+LR+ G  ++
Sbjct: 176 A---LDLVRHQTLTCYNG------LIGDGCGECPACHLRKSGLNDY 212


>gi|149175149|ref|ZP_01853772.1| ExsB [Planctomyces maris DSM 8797]
 gi|148846127|gb|EDL60467.1| ExsB [Planctomyces maris DSM 8797]
          Length = 233

 Score =  175 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 76/241 (31%), Positives = 111/241 (46%), Gaps = 27/241 (11%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  + P A++L SGG DS+T L+ A D    +  LSFDYGQR++ ELE    V +     
Sbjct: 1   MTTEVPKAVVLVSGGLDSATTLAIAADAGFELYALSFDYGQRHRHELEAAKKVCQAFDVK 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                        L L + G  + ++      + +    +  +P T+VP RN +FL  A 
Sbjct: 61  KFVIFP-------LDLRVFGGSALTADIDVPKDRSEHDLETGIPITYVPARNTVFLSLAL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG------MESHVTVHTPLMW 174
             A  L   ++ IGV   DYSGYPDCR + I A +T  +L          H  +HTPL+ 
Sbjct: 114 AWAETLNAYDLFIGVNAVDYSGYPDCRPEFISAFQTVASLATKTGVEHSGHWKIHTPLIS 173

Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           LKK +  K   ++G      +    +H+CY          G  C  C +C LR KG+ E 
Sbjct: 174 LKKADIIKTGMELG------VDYGLTHSCYDP-----LPDGTPCGHCDSCQLRAKGFAEA 222

Query: 235 K 235
            
Sbjct: 223 G 223


>gi|15923702|ref|NP_371236.1| aluminum resistance protein [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15926389|ref|NP_373922.1| hypothetical protein SA0667 [Staphylococcus aureus subsp. aureus
           N315]
 gi|21282403|ref|NP_645491.1| hypothetical protein MW0674 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49482968|ref|YP_040192.1| hypothetical protein SAR0765 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49485584|ref|YP_042805.1| hypothetical protein SAS0677 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57651551|ref|YP_185649.1| exsB protein [Staphylococcus aureus subsp. aureus COL]
 gi|87160495|ref|YP_493400.1| exsB protein [Staphylococcus aureus subsp. aureus USA300_FPR3757]
 gi|88194486|ref|YP_499280.1| hypothetical protein SAOUHSC_00721 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148267172|ref|YP_001246115.1| exsB protein [Staphylococcus aureus subsp. aureus JH9]
 gi|150393220|ref|YP_001315895.1| exsB protein [Staphylococcus aureus subsp. aureus JH1]
 gi|151220893|ref|YP_001331715.1| hypothetical protein NWMN_0681 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156979040|ref|YP_001441299.1| hypothetical protein SAHV_0709 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|161508976|ref|YP_001574635.1| ExsB family post-transcriptional regulator [Staphylococcus aureus
           subsp. aureus USA300_TCH1516]
 gi|221140928|ref|ZP_03565421.1| ExsB family post-transcriptional regulator [Staphylococcus aureus
           subsp. aureus str. JKD6009]
 gi|253315351|ref|ZP_04838564.1| exsB protein [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253731335|ref|ZP_04865500.1| ExsB family post-transcriptional regulator [Staphylococcus aureus
           subsp. aureus USA300_TCH959]
 gi|253732844|ref|ZP_04867009.1| ExsB family post-transcriptional regulator [Staphylococcus aureus
           subsp. aureus TCH130]
 gi|255005504|ref|ZP_05144105.2| exsB protein [Staphylococcus aureus subsp. aureus Mu50-omega]
 gi|257424831|ref|ZP_05601258.1| exsB protein [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257427499|ref|ZP_05603898.1| exsB protein [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257430130|ref|ZP_05606514.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257432832|ref|ZP_05609192.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
           aureus E1410]
 gi|257435736|ref|ZP_05611784.1| exsB protein [Staphylococcus aureus subsp. aureus M876]
 gi|257794967|ref|ZP_05643946.1| exsB protein [Staphylococcus aureus A9781]
 gi|258418284|ref|ZP_05682549.1| queuosine biosynthesis protein queC [Staphylococcus aureus A9763]
 gi|258421581|ref|ZP_05684506.1| exsB protein [Staphylococcus aureus A9719]
 gi|258430774|ref|ZP_05688486.1| queuosine biosynthesis protein queC [Staphylococcus aureus A9299]
 gi|258441733|ref|ZP_05691005.1| queuosine biosynthesis protein queC [Staphylococcus aureus A8115]
 gi|258445825|ref|ZP_05694002.1| queuosine biosynthesis protein queC [Staphylococcus aureus A6300]
 gi|258449636|ref|ZP_05697738.1| queuosine biosynthesis protein queC [Staphylococcus aureus A6224]
 gi|258452920|ref|ZP_05700914.1| queuosine biosynthesis protein queC [Staphylococcus aureus A5948]
 gi|258454037|ref|ZP_05702009.1| queuosine biosynthesis protein queC [Staphylococcus aureus A5937]
 gi|262048447|ref|ZP_06021332.1| hypothetical protein SAD30_2174 [Staphylococcus aureus D30]
 gi|262052794|ref|ZP_06024982.1| hypothetical protein SA930_0351 [Staphylococcus aureus 930918-3]
 gi|269202332|ref|YP_003281601.1| exsB protein [Staphylococcus aureus subsp. aureus ED98]
 gi|282894477|ref|ZP_06302706.1| exsB protein [Staphylococcus aureus A8117]
 gi|282903339|ref|ZP_06311230.1| ExsB protein [Staphylococcus aureus subsp. aureus C160]
 gi|282905119|ref|ZP_06312977.1| exsB protein [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282908096|ref|ZP_06315927.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|282910356|ref|ZP_06318160.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282913549|ref|ZP_06321338.1| ExsB protein [Staphylococcus aureus subsp. aureus M899]
 gi|282916050|ref|ZP_06323813.1| exsB protein [Staphylococcus aureus subsp. aureus D139]
 gi|282918502|ref|ZP_06326239.1| exsB protein [Staphylococcus aureus subsp. aureus C427]
 gi|282922004|ref|ZP_06329701.1| exsB protein [Staphylococcus aureus A9765]
 gi|282923467|ref|ZP_06331147.1| exsB protein [Staphylococcus aureus subsp. aureus C101]
 gi|283769874|ref|ZP_06342766.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
           aureus H19]
 gi|283957541|ref|ZP_06374994.1| ExsB protein [Staphylococcus aureus subsp. aureus A017934/97]
 gi|284023734|ref|ZP_06378132.1| exsB protein [Staphylococcus aureus subsp. aureus 132]
 gi|293500596|ref|ZP_06666447.1| exsB protein [Staphylococcus aureus subsp. aureus 58-424]
 gi|293509542|ref|ZP_06668253.1| exsB protein [Staphylococcus aureus subsp. aureus M809]
 gi|293524128|ref|ZP_06670815.1| ExsB protein [Staphylococcus aureus subsp. aureus M1015]
 gi|294849381|ref|ZP_06790124.1| exsB protein [Staphylococcus aureus A9754]
 gi|295406430|ref|ZP_06816236.1| exsB protein [Staphylococcus aureus A8819]
 gi|295427288|ref|ZP_06819923.1| exsB protein [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|296274776|ref|ZP_06857283.1| exsB protein [Staphylococcus aureus subsp. aureus MR1]
 gi|297208564|ref|ZP_06924993.1| transcription regulator ExsB [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|297245157|ref|ZP_06929031.1| exsB protein [Staphylococcus aureus A8796]
 gi|297590361|ref|ZP_06949000.1| transcription regulator ExsB [Staphylococcus aureus subsp. aureus
           MN8]
 gi|300912656|ref|ZP_07130099.1| transcription regulator ExsB [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|304381673|ref|ZP_07364322.1| transcription regulator ExsB [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|81649771|sp|Q6GBB8|QUEC_STAAS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|81651556|sp|Q6GIT0|QUEC_STAAR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|81695012|sp|Q5HHV8|QUEC_STAAC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|81704614|sp|Q7A1I5|QUEC_STAAW RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|81706049|sp|Q7A6U7|QUEC_STAAN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|81781962|sp|Q99VR1|QUEC_STAAM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|110816263|sp|Q2FIS8|QUEC_STAA3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|110816264|sp|Q2G1X6|QUEC_STAA8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|189029535|sp|A7WZJ4|QUEC_STAA1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|189029536|sp|A6TZJ0|QUEC_STAA2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|189029537|sp|A5IQR6|QUEC_STAA9 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|189029538|sp|A6QF21|QUEC_STAAE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|189029539|sp|A8YZY3|QUEC_STAAT RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|13700603|dbj|BAB41900.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           N315]
 gi|14246481|dbj|BAB56874.1| similar to aluminum resistance protein [Staphylococcus aureus
           subsp. aureus Mu50]
 gi|21203840|dbj|BAB94539.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49241097|emb|CAG39775.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49244027|emb|CAG42453.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57285737|gb|AAW37831.1| exsB protein [Staphylococcus aureus subsp. aureus COL]
 gi|87126469|gb|ABD20983.1| exsB protein [Staphylococcus aureus subsp. aureus USA300_FPR3757]
 gi|87202044|gb|ABD29854.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147740241|gb|ABQ48539.1| exsB protein [Staphylococcus aureus subsp. aureus JH9]
 gi|149945672|gb|ABR51608.1| exsB protein [Staphylococcus aureus subsp. aureus JH1]
 gi|150373693|dbj|BAF66953.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156721175|dbj|BAF77592.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|160367785|gb|ABX28756.1| ExsB family post-transcriptional regulator [Staphylococcus aureus
           subsp. aureus USA300_TCH1516]
 gi|253725076|gb|EES93805.1| ExsB family post-transcriptional regulator [Staphylococcus aureus
           subsp. aureus USA300_TCH959]
 gi|253729209|gb|EES97938.1| ExsB family post-transcriptional regulator [Staphylococcus aureus
           subsp. aureus TCH130]
 gi|257272401|gb|EEV04524.1| exsB protein [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257275692|gb|EEV07165.1| exsB protein [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257279327|gb|EEV09928.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257282247|gb|EEV12382.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
           aureus E1410]
 gi|257284927|gb|EEV15046.1| exsB protein [Staphylococcus aureus subsp. aureus M876]
 gi|257788939|gb|EEV27279.1| exsB protein [Staphylococcus aureus A9781]
 gi|257839077|gb|EEV63556.1| queuosine biosynthesis protein queC [Staphylococcus aureus A9763]
 gi|257842507|gb|EEV66931.1| exsB protein [Staphylococcus aureus A9719]
 gi|257849446|gb|EEV73416.1| queuosine biosynthesis protein queC [Staphylococcus aureus A9299]
 gi|257852202|gb|EEV76129.1| queuosine biosynthesis protein queC [Staphylococcus aureus A8115]
 gi|257855401|gb|EEV78339.1| queuosine biosynthesis protein queC [Staphylococcus aureus A6300]
 gi|257857144|gb|EEV80043.1| queuosine biosynthesis protein queC [Staphylococcus aureus A6224]
 gi|257859431|gb|EEV82285.1| queuosine biosynthesis protein queC [Staphylococcus aureus A5948]
 gi|257863902|gb|EEV86658.1| queuosine biosynthesis protein queC [Staphylococcus aureus A5937]
 gi|259159335|gb|EEW44391.1| hypothetical protein SA930_0351 [Staphylococcus aureus 930918-3]
 gi|259163535|gb|EEW48092.1| hypothetical protein SAD30_2174 [Staphylococcus aureus D30]
 gi|262074622|gb|ACY10595.1| exsB protein [Staphylococcus aureus subsp. aureus ED98]
 gi|269940289|emb|CBI48666.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           TW20]
 gi|282314335|gb|EFB44725.1| exsB protein [Staphylococcus aureus subsp. aureus C101]
 gi|282317636|gb|EFB48008.1| exsB protein [Staphylococcus aureus subsp. aureus C427]
 gi|282319998|gb|EFB50345.1| exsB protein [Staphylococcus aureus subsp. aureus D139]
 gi|282322581|gb|EFB52903.1| ExsB protein [Staphylococcus aureus subsp. aureus M899]
 gi|282325748|gb|EFB56056.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282327761|gb|EFB58043.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|282331944|gb|EFB61455.1| exsB protein [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282593662|gb|EFB98654.1| exsB protein [Staphylococcus aureus A9765]
 gi|282596294|gb|EFC01255.1| ExsB protein [Staphylococcus aureus subsp. aureus C160]
 gi|282763190|gb|EFC03321.1| exsB protein [Staphylococcus aureus A8117]
 gi|283460021|gb|EFC07111.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
           aureus H19]
 gi|283470006|emb|CAQ49217.1| ExsB protein [Staphylococcus aureus subsp. aureus ST398]
 gi|283790992|gb|EFC29807.1| ExsB protein [Staphylococcus aureus subsp. aureus A017934/97]
 gi|285816413|gb|ADC36900.1| Queuosine Biosynthesis QueC ATPase [Staphylococcus aureus 04-02981]
 gi|290921091|gb|EFD98152.1| ExsB protein [Staphylococcus aureus subsp. aureus M1015]
 gi|291095601|gb|EFE25862.1| exsB protein [Staphylococcus aureus subsp. aureus 58-424]
 gi|291467639|gb|EFF10154.1| exsB protein [Staphylococcus aureus subsp. aureus M809]
 gi|294823913|gb|EFG40339.1| exsB protein [Staphylococcus aureus A9754]
 gi|294968575|gb|EFG44598.1| exsB protein [Staphylococcus aureus A8819]
 gi|295128676|gb|EFG58307.1| exsB protein [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|296886819|gb|EFH25723.1| transcription regulator ExsB [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|297177828|gb|EFH37077.1| exsB protein [Staphylococcus aureus A8796]
 gi|297576660|gb|EFH95375.1| transcription regulator ExsB [Staphylococcus aureus subsp. aureus
           MN8]
 gi|298694041|gb|ADI97263.1| aluminum resistance protein [Staphylococcus aureus subsp. aureus
           ED133]
 gi|300886902|gb|EFK82104.1| transcription regulator ExsB [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|302750610|gb|ADL64787.1| queuosine biosynthesis protein QueC [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|304339776|gb|EFM05721.1| transcription regulator ExsB [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|312438866|gb|ADQ77937.1| transcription regulator ExsB [Staphylococcus aureus subsp. aureus
           TCH60]
 gi|312829205|emb|CBX34047.1| queuosine biosynthesis protein queC [Staphylococcus aureus subsp.
           aureus ECT-R 2]
 gi|315129387|gb|EFT85380.1| ExsB family post-transcriptional regulator [Staphylococcus aureus
           subsp. aureus CGS03]
 gi|315194328|gb|EFU24720.1| ExsB family post-transcriptional regulator [Staphylococcus aureus
           subsp. aureus CGS00]
 gi|315197688|gb|EFU28023.1| ExsB family post-transcriptional regulator [Staphylococcus aureus
           subsp. aureus CGS01]
 gi|320139956|gb|EFW31817.1| ExsB protein [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320141954|gb|EFW33782.1| ExsB protein [Staphylococcus aureus subsp. aureus MRSA177]
 gi|323438939|gb|EGA96674.1| aluminum resistance protein [Staphylococcus aureus O11]
 gi|323441588|gb|EGA99237.1| aluminum resistance protein [Staphylococcus aureus O46]
 gi|329313434|gb|AEB87847.1| 7-cyano-7-deazaguanine synthase [Staphylococcus aureus subsp.
           aureus T0131]
 gi|329724593|gb|EGG61100.1| queuosine biosynthesis protein QueC [Staphylococcus aureus subsp.
           aureus 21172]
 gi|329728517|gb|EGG64950.1| protein ExsB [Staphylococcus aureus subsp. aureus 21189]
 gi|329729639|gb|EGG66040.1| protein ExsB [Staphylococcus aureus subsp. aureus 21193]
          Length = 222

 Score =  175 bits (442), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 91/235 (38%), Positives = 147/235 (62%), Gaps = 20/235 (8%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +     A+++FSGGQDS+TCL +A   F  VE ++F+YGQR+  E+E    + +    
Sbjct: 2   ESVLNNEKAIVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDTEIEVAKQIAQ---- 57

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                 D   + H+L +++L  ++ ++LT  ++ +   ++ +PNTFVP RN++FL FA  
Sbjct: 58  ------DQGMKHHVLDMSLLSQLTPNALTQHDMEITNNEDGIPNTFVPARNLLFLSFAGA 111

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           LAY++G  +I+ GVCETD+SGYPDCR   I+++   ++L M+    +HTPLMWL K ETW
Sbjct: 112 LAYQIGAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLAMDKDFVIHTPLMWLNKAETW 171

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           KL+ ++   ++++ I  ++ TCY G        G GC  CPAC+LRQ+G  ++ E
Sbjct: 172 KLSDEL---EVLDYIRTKTLTCYNGI------IGDGCGECPACHLRQRGLNQYLE 217


>gi|325111074|ref|YP_004272142.1| preQ(0) biosynthesis protein QueC [Planctomyces brasiliensis DSM
           5305]
 gi|324971342|gb|ADY62120.1| preQ(0) biosynthesis protein QueC [Planctomyces brasiliensis DSM
           5305]
          Length = 230

 Score =  175 bits (442), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 71/243 (29%), Positives = 112/243 (46%), Gaps = 33/243 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +     A++L SGG DSST L+ A ++   +  +SFDYGQ+++ EL+    + +      
Sbjct: 1   MNAPRKAVVLLSGGLDSSTTLAIAREQGFELWAISFDYGQKHRFELDAARRLAQAFD--- 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMK------IQDNNLPNTFVPGRNIIFLVF 118
                   + H++    LG    S+LT ++ +         +  +P T+VP RN +FL  
Sbjct: 58  -------VKKHVIVKIDLGAFGGSALTSDIEVPKDRSTDQMEAAIPITYVPARNTVFLST 110

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPL 172
           A   A  L  +++ IGV   DYSGYPDCR + + A     NL  ++ V       VH PL
Sbjct: 111 ALGWAETLDCSDLFIGVNAVDYSGYPDCRPEFVEAFTRLANLATKTGVEGTADWKVHAPL 170

Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
           + L K +  +    +G      +    +HTCY          G  C  C AC LR +G+ 
Sbjct: 171 IDLTKADIIRKGTALG------VDYAMTHTCYDPNEA-----GLACGHCDACQLRLQGFE 219

Query: 233 EFK 235
           +  
Sbjct: 220 QAG 222


>gi|28871113|ref|NP_793732.1| exsB protein [Pseudomonas syringae pv. tomato str. DC3000]
 gi|81730072|sp|Q87Y44|QUEC_PSESM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|28854363|gb|AAO57427.1| exsB protein [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 226

 Score =  175 bits (442), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 69/244 (28%), Positives = 105/244 (43%), Gaps = 28/244 (11%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      A++L SGG DS+T ++ A        T+SFDYGQR++ EL+    V + +  +
Sbjct: 1   MTNTEKRAVILLSGGLDSATVVAMARAEGYACYTMSFDYGQRHRAELDAAARVARDLGAV 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
             K          L L+ +G  + +  +  V     +      +VP RN +FL  A   A
Sbjct: 61  EHKVIG-------LNLSGIGGSALTDSSIAVPESPSEGIPVT-YVPARNTVFLSLALGWA 112

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKY 178
             LG  +I IGV   DYSGYPDCR + + + E   NL  +        T+  PL  L K 
Sbjct: 113 EVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQNLSKS 172

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW----MEF 234
           +  K    +G      +    + +CY          G  C  C +C LR +G+    M  
Sbjct: 173 DIVKAGIALG------VDYALTVSCYQADD-----QGRACGKCDSCRLRAEGFTASGMSD 221

Query: 235 KEKY 238
             +Y
Sbjct: 222 PTRY 225


>gi|325298550|ref|YP_004258467.1| exsB protein [Bacteroides salanitronis DSM 18170]
 gi|324318103|gb|ADY35994.1| exsB protein [Bacteroides salanitronis DSM 18170]
          Length = 222

 Score =  174 bits (441), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 92/232 (39%), Positives = 129/232 (55%), Gaps = 16/232 (6%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              AL++FSGGQDS+TCL WA   F  V  L+F YGQ++  E++    + +K        
Sbjct: 3   KNKALVVFSGGQDSTTCLFWAKKHFKEVYALTFLYGQKHVKEVDLAREIARKAEVHFDVM 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             S           LG  S + L+  +  +  + N PNTFVPGRN+ FL  AA  A   G
Sbjct: 63  DVSFIGH-------LGKNSLTDLSIPMDEEKPEGNYPNTFVPGRNLFFLSIAAVYARERG 115

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I+++V GV +TD+SGYPDCR   I+++   +NL M+    +HTPLMW+ K ETW LA ++
Sbjct: 116 ISHLVTGVSQTDFSGYPDCRDSFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWALADEL 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           G  D+V     ++ TCY G        G GC  CPAC LR++G  ++ E  Q
Sbjct: 176 GAFDIVR---NDTLTCYNGIP------GDGCGHCPACKLRREGLEKYLENKQ 218


>gi|302332422|gb|ADL22615.1| queuosine biosynthesis protein QueC [Staphylococcus aureus subsp.
           aureus JKD6159]
          Length = 222

 Score =  174 bits (441), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 91/235 (38%), Positives = 147/235 (62%), Gaps = 20/235 (8%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +     A+++FSGGQDS+TCL +A   F  VE ++F+YGQR+  E+E    + +    
Sbjct: 2   ESVLNNEKAIVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDTEIEIAKQIAQ---- 57

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                 D   + H+L +++L  ++ ++LT  ++ +   ++ +PNTFVP RN++FL FA  
Sbjct: 58  ------DQGMKHHVLDMSLLSQLTPNALTQHDMEITNNEDGIPNTFVPARNLLFLSFAGA 111

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           LAY++G  +I+ GVCETD+SGYPDCR   I+++   ++L M+    +HTPLMWL K ETW
Sbjct: 112 LAYQIGAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLAMDKDFVIHTPLMWLNKAETW 171

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           KL+ ++   ++++ I  ++ TCY G        G GC  CPAC+LRQ+G  ++ E
Sbjct: 172 KLSDEL---EVLDYIRTKTLTCYNGI------IGDGCGECPACHLRQRGLNQYLE 217


>gi|125975583|ref|YP_001039493.1| exsB protein [Clostridium thermocellum ATCC 27405]
 gi|256005912|ref|ZP_05430857.1| exsB protein [Clostridium thermocellum DSM 2360]
 gi|281416595|ref|ZP_06247615.1| exsB protein [Clostridium thermocellum JW20]
 gi|189038911|sp|A3DK21|QUEC_CLOTH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|125715808|gb|ABN54300.1| preQ(0) biosynthesis protein QueC [Clostridium thermocellum ATCC
           27405]
 gi|255990116|gb|EEU00253.1| exsB protein [Clostridium thermocellum DSM 2360]
 gi|281407997|gb|EFB38255.1| exsB protein [Clostridium thermocellum JW20]
 gi|316939702|gb|ADU73736.1| exsB protein [Clostridium thermocellum DSM 1313]
          Length = 222

 Score =  174 bits (441), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 89/232 (38%), Positives = 113/232 (48%), Gaps = 27/232 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DS+TCLS AL     V  LSFDYGQRN+ ELE    V K           
Sbjct: 3   RAVVLLSGGLDSTTCLSVALAEGYEVYPLSFDYGQRNRKELESAKQVVKYF--------- 53

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            L E  I+ +  +G  + + +  +V        +P T+VP RNIIFL +A   A  +   
Sbjct: 54  KLKEHKIVKIGNVGGSALTDMNIDVPDYKGLPTIPVTYVPARNIIFLSYAVGYAEVVDAE 113

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKLA 184
            I IGV   DYSGYPDCR + I A + AINLG +       V + TPL+ L K E  KLA
Sbjct: 114 AIFIGVNAVDYSGYPDCRPEFIEAFQKAINLGTKSGVNGKPVKIITPLINLSKAEIIKLA 173

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            +       N  L  + TCY G           C  C +C LR KG+ E   
Sbjct: 174 CE------NNAPLHLTTTCYRGGEK-------ACGVCDSCVLRLKGFKEAGI 212


>gi|297584922|ref|YP_003700702.1| exsB protein [Bacillus selenitireducens MLS10]
 gi|297143379|gb|ADI00137.1| exsB protein [Bacillus selenitireducens MLS10]
          Length = 219

 Score =  174 bits (441), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 97/231 (41%), Positives = 145/231 (62%), Gaps = 20/231 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +     AL++FSGGQDS+TCL WAL+RF  VET++FDY QR+  E+E    + K++    
Sbjct: 1   MLNEEKALVVFSGGQDSTTCLFWALERFKEVETVTFDYHQRHSQEIEVAEGIAKELG--- 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                   ++ +L L++L  +S ++LT+ ++A++ +D  LP+TFVPGRN +FL FA  +A
Sbjct: 58  -------VKNTVLDLSLLNQLSANALTRSDIAIEQKDRELPSTFVPGRNHLFLSFAGVMA 110

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +G  +IV GVCETD+SGYPDCR   I+++   +NL M+    + TPLMWL K ETW L
Sbjct: 111 KSMGAKHIVTGVCETDFSGYPDCRDVFIKSLNVTLNLAMDDTFVIDTPLMWLNKKETWAL 170

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           A ++G    ++ + E++ TCY G          GC  CPAC LR+ G  ++
Sbjct: 171 ADELGA---LDFVREKTLTCYNGI------LADGCGECPACELRKNGLDDY 212


>gi|198282217|ref|YP_002218538.1| exsB protein [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218665551|ref|YP_002424582.1| exsB protein [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198246738|gb|ACH82331.1| exsB protein [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218517764|gb|ACK78350.1| exsB protein [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 229

 Score =  174 bits (441), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 72/246 (29%), Positives = 108/246 (43%), Gaps = 27/246 (10%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +   A  A++L SGG DS+T L+        V  LSFDYGQR+K EL     + + +   
Sbjct: 1   MPTPATPAIVLLSGGLDSATVLALMRRDGFAVHALSFDYGQRHKEELRYAALLAQSMGAA 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
             +          + LA  G  + +    ++        +P T+VP RN +FL  A  LA
Sbjct: 61  SHRV-------LRIDLAAFGGSALTDPQLSIPETGLAPGIPITYVPARNTVFLSLALALA 113

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKY 178
             LG  +I +GV   DYSGYPDCR + ++A E    +            +H PL +L K 
Sbjct: 114 EVLGARDIFLGVNSQDYSGYPDCRAEFVQAFEALAQVATRLGDEARGPRIHAPLQFLNKS 173

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK--- 235
           E  +L   +G      +    + +CY          G  C  C +C LR++G+ +     
Sbjct: 174 EIIRLGSRLG------VDYGMTRSCYQ-----LDAEGRSCGRCDSCRLRREGFRQAGIAD 222

Query: 236 -EKYQD 240
              YQD
Sbjct: 223 PTPYQD 228


>gi|330502229|ref|YP_004379098.1| ExsB protein [Pseudomonas mendocina NK-01]
 gi|328916515|gb|AEB57346.1| ExsB protein [Pseudomonas mendocina NK-01]
          Length = 224

 Score =  174 bits (441), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 71/247 (28%), Positives = 110/247 (44%), Gaps = 33/247 (13%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MND       A++L SGG DS+T ++ A        ++SFDYGQR++ EL+    V +++
Sbjct: 1   MND-----KKAVILLSGGLDSATVVAMARAEGYACYSMSFDYGQRHRAELQAAERVARQL 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  K          L L  +G  + +  +  V     +  +P+T+VP RN +FL  A 
Sbjct: 56  GVVEHKVIG-------LNLNGIGGSALTDSSIAVPEAPTE-GIPSTYVPARNTVFLALAL 107

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG-----MESHVTVHTPLMWL 175
             A  L   +I IGV   DYSGYPDCR + + A E   NL           ++  PL  +
Sbjct: 108 GWAEVLEARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVQGQSFSIRAPLQQM 167

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K E  ++   +G      +    + +CY    D     G  C  C +C LR  G++   
Sbjct: 168 SKAEIIQVGMSLG------VDYALTVSCYQADDD-----GRACGKCDSCRLRAAGFVAAG 216

Query: 236 ----EKY 238
                +Y
Sbjct: 217 VPDATRY 223


>gi|239636675|ref|ZP_04677677.1| ExsB protein [Staphylococcus warneri L37603]
 gi|239598030|gb|EEQ80525.1| ExsB protein [Staphylococcus warneri L37603]
          Length = 223

 Score =  174 bits (441), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 93/231 (40%), Positives = 142/231 (61%), Gaps = 20/231 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+++FSGGQDS+TCL +A   F  V  ++F+YGQR+  E+E    + +         
Sbjct: 8   QNKAIVVFSGGQDSTTCLFYAKKHFKDVTLVTFNYGQRHDTEIEVAKKIAQ--------- 58

Query: 68  KDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +   E HIL +++L  ++ ++LT  ++ ++  ++ +PNTFVP RN++FL FA  LAY++
Sbjct: 59  -EQNVEHHILDMSLLSQLTPNALTQHDLKIEDTEDGIPNTFVPARNLLFLSFAGALAYQI 117

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
              +I+ GVCETD+SGYPDCR   I+++   +NL M+    +HTPLMWL K +TW+LA D
Sbjct: 118 KAKHIITGVCETDFSGYPDCRDSFIKSMNVTLNLSMDRDFVIHTPLMWLDKAQTWELADD 177

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +G   ++N I E + TCY G        G GC  CPAC LR +G  ++  K
Sbjct: 178 LG---VLNYIRENTLTCYNGI------IGDGCGECPACQLRSRGLEKYLAK 219


>gi|296122193|ref|YP_003629971.1| exsB protein [Planctomyces limnophilus DSM 3776]
 gi|296014533|gb|ADG67772.1| exsB protein [Planctomyces limnophilus DSM 3776]
          Length = 244

 Score =  174 bits (441), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 70/247 (28%), Positives = 110/247 (44%), Gaps = 30/247 (12%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K +P  ++L SGG DS+T L+ A  +      +SFDYGQR++ ELE    V +       
Sbjct: 16  KISPPCVVLVSGGLDSATILAMAKAQGFSPFAISFDYGQRHRFELEAAEKVCQAQGVARH 75

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN---NLPNTFVPGRNIIFLVFAATL 122
                      L +  +G  + ++       + +      +P T+VP RN +FL  A   
Sbjct: 76  VVIP-------LDMRSIGGSALTANIDVPKDRSEAELTSGIPITYVPARNTVFLSIALGW 128

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKK 177
           A  +G  ++ +GV   DYSGYPDCR + + A E   NL  +         +H PL+ L K
Sbjct: 129 AEVIGAQDLFVGVNAVDYSGYPDCRPEFVAAFEKLANLATQTGVEGQPWKIHAPLIHLTK 188

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF--- 234
            E  +    +G      +    +H+CY          G  C  C +C +R+KG++E    
Sbjct: 189 AEIIRQGVALG------VDYSLTHSCYDP-----TPTGLSCGHCDSCLIRKKGFLEAHIP 237

Query: 235 -KEKYQD 240
              +Y D
Sbjct: 238 DPTRYAD 244


>gi|261855157|ref|YP_003262440.1| exsB protein [Halothiobacillus neapolitanus c2]
 gi|261835626|gb|ACX95393.1| exsB protein [Halothiobacillus neapolitanus c2]
          Length = 235

 Score =  174 bits (441), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 74/244 (30%), Positives = 106/244 (43%), Gaps = 26/244 (10%)

Query: 1   MN-DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           M+ D     P A++L SGG DS+T  + A     +V  +SFDYGQR+KVEL+    V  +
Sbjct: 1   MSLDTENTQPKAVVLLSGGLDSATVAAIAKSDGYQVHAVSFDYGQRHKVELKAAYRVALQ 60

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK--IQDNNLPNTFVPGRNIIFLV 117
           +     K          + L  +G  + +     V         ++P T+VP RN+ FL 
Sbjct: 61  LGIQHHK-------MISINLNDVGGSALTDSALAVPDYDAQSAEHIPITYVPARNLTFLS 113

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG-----MESHVTVHTPL 172
            A   A  LG   I IGV   DYSGYPDCR + I+  E   NL            +  PL
Sbjct: 114 LALGWAEILGARRIYIGVNAVDYSGYPDCRPEFIKQFEVTANLATAAGLTGEPFKIIAPL 173

Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
             L K E  +     G      +   ++ +CY          G  C  C AC+ R++G+M
Sbjct: 174 QTLTKAEIIQWGTRFG------VDYAQTISCYNPDE-----QGRACGRCDACHYRKQGFM 222

Query: 233 EFKE 236
           +   
Sbjct: 223 DAGI 226


>gi|189424272|ref|YP_001951449.1| exsB protein [Geobacter lovleyi SZ]
 gi|189420531|gb|ACD94929.1| exsB protein [Geobacter lovleyi SZ]
          Length = 223

 Score =  174 bits (441), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 80/236 (33%), Positives = 120/236 (50%), Gaps = 29/236 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L+S G DS+TCL+ A D+      +SFDYGQR++ EL+      +K+  +      
Sbjct: 3   KAVILYSSGLDSTTCLAIARDQGFAPYAISFDYGQRHRHELDLARANARKLGAV------ 56

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYRLG 127
               +H++    L  +  S+LT  + +  +   +++P T+VP RN IFL FA   A  LG
Sbjct: 57  ----EHLVVAFDLRQVGGSALTSEIDVPKEGVADDIPVTYVPARNTIFLSFALGWAEVLG 112

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES------HVTVHTPLMWLKKYETW 181
             +I IGV   DYSGYPDCR + I A +   NL  ++      H T+HTPL+ L K E  
Sbjct: 113 AYDIFIGVNALDYSGYPDCRPEYIDAYQRMANLATKAGVEGTGHFTIHTPLINLTKAEII 172

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           K    +G      +   ++H+CY          G  C  C +C LR KG+ E   +
Sbjct: 173 KQGTALG------VDYSQTHSCYDP-----TPDGLSCGQCDSCRLRLKGFSEAGLR 217


>gi|117923750|ref|YP_864367.1| exsB protein [Magnetococcus sp. MC-1]
 gi|189038921|sp|A0L4R8|QUEC_MAGSM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|117607506|gb|ABK42961.1| preQ(0) biosynthesis protein QueC [Magnetococcus sp. MC-1]
          Length = 228

 Score =  174 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 76/240 (31%), Positives = 113/240 (47%), Gaps = 27/240 (11%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M  I+     A++L SGG DS+T L  A     R+  LSF YGQR+ +ELE        +
Sbjct: 1   MPTIMS----AVVLLSGGLDSATVLRMAHATGQRIHALSFRYGQRHTMELEMARKQALSL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  +  D       L L++ G  + ++        + +N +P T+VP RN++FL  A 
Sbjct: 57  PGVAHRIMD-------LQLSLFGGSALTADIPVPKGGVDENTIPVTYVPARNMVFLSLAL 109

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWL 175
             A  LG  ++ IGV   DYSGYPDCR + I++ +   NL  +        TVHTPL+ L
Sbjct: 110 AWAESLGAQHLYIGVNAVDYSGYPDCRPEFIQSFQQTANLATKAGVEGHPFTVHTPLINL 169

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K +  +    +G      +    + +CY          G GC  C AC LR +G+ E  
Sbjct: 170 TKAQIIQQGLALG------VDYGLTRSCYDPD-----AQGAGCGLCDACRLRLQGFAEAG 218


>gi|154685782|ref|YP_001420943.1| YkvJ [Bacillus amyloliquefaciens FZB42]
 gi|154351633|gb|ABS73712.1| YkvJ [Bacillus amyloliquefaciens FZB42]
          Length = 248

 Score =  174 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 98/229 (42%), Positives = 146/229 (63%), Gaps = 20/229 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WAL  F+ VET++F Y QR++ E++    + +K+      
Sbjct: 31  KKEKAVVVFSGGQDSTTCLLWALQNFEEVETVTFHYNQRHQEEIDVAKSIAEKLG----- 85

Query: 67  WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 ++H+L +++L  ++ ++LT  ++ ++ +D  LP TFVPGRN++FL FA+ LAY+
Sbjct: 86  -----VKNHLLDMSLLNQLAPNALTRDDIEIEAKDGELPTTFVPGRNLVFLSFASILAYQ 140

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G  +I+ GVCETD+SGYPDCR + +++    +NL ME    +HTPLMWL K ETWKLA 
Sbjct: 141 IGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIHTPLMWLNKAETWKLAD 200

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           ++G  D V      + TCY G          GC  CPAC LR KG+ E+
Sbjct: 201 ELGALDFVK---NNTLTCYNGI------IADGCGECPACLLRNKGYDEY 240


>gi|28898412|ref|NP_798017.1| queuosine biosynthesis protein QueC [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260365145|ref|ZP_05777716.1| protein ExsB [Vibrio parahaemolyticus K5030]
 gi|260876574|ref|ZP_05888929.1| protein ExsB [Vibrio parahaemolyticus AN-5034]
 gi|260895067|ref|ZP_05903563.1| protein ExsB [Vibrio parahaemolyticus Peru-466]
 gi|260900923|ref|ZP_05909318.1| protein ExsB [Vibrio parahaemolyticus AQ4037]
 gi|81727639|sp|Q87P80|QUEC_VIBPA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|28806629|dbj|BAC59901.1| exsB protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|308086022|gb|EFO35717.1| protein ExsB [Vibrio parahaemolyticus Peru-466]
 gi|308093579|gb|EFO43274.1| protein ExsB [Vibrio parahaemolyticus AN-5034]
 gi|308110776|gb|EFO48316.1| protein ExsB [Vibrio parahaemolyticus AQ4037]
 gi|308111509|gb|EFO49049.1| protein ExsB [Vibrio parahaemolyticus K5030]
          Length = 232

 Score =  174 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 97/226 (42%), Positives = 136/226 (60%), Gaps = 15/226 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  FD V  ++FDYGQR+K+E+E    + K +     K  
Sbjct: 2   KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQKIAKDLGVKAHKVM 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D      +  L  L   S +     V+ ++Q+N LPN+FVPGRNI+FL  A   AY++G 
Sbjct: 62  D------VGLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIGA 115

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++ GVCETD+SGYPDCR D ++++ TA+  GM+  +T+ TPLMWL K ETW LA    
Sbjct: 116 DTVITGVCETDFSGYPDCRDDFVKSMNTALVKGMDRALTIKTPLMWLNKAETWALADQ-- 173

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
             + + L+ E + TCY G        G GC  CP+C LR+ G  E+
Sbjct: 174 -YNALQLVRENTLTCYNGI------IGDGCGDCPSCDLRKAGLDEY 212


>gi|308067861|ref|YP_003869466.1| hypothetical protein PPE_01080 [Paenibacillus polymyxa E681]
 gi|305857140|gb|ADM68928.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
          Length = 227

 Score =  174 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 90/231 (38%), Positives = 137/231 (59%), Gaps = 20/231 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +     A+++FSGGQDS+TCL WA   F  VET++FDYGQR+K E+E    + +++    
Sbjct: 1   MFANEKAVVVFSGGQDSTTCLFWAKKHFAEVETVTFDYGQRHKQEIEVAAGIARELG--- 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      +L +++L  ++ ++LT  ++ +  Q+  LP+TFV GRN++FL FA  LA
Sbjct: 58  -------VPQTVLDMSLLNQLAPNALTRTDIDITQQEGELPSTFVDGRNLLFLSFAGVLA 110

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            + G  +++ GVCETD+SGYPDCR   I+++   +NL M+    +HTPLMWL K ETW +
Sbjct: 111 KQKGARHLITGVCETDFSGYPDCRDSFIKSLNVTLNLSMDYPFVIHTPLMWLNKAETWHM 170

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           A ++   + V      + TCY G        G GC  CPAC LR+ G  ++
Sbjct: 171 ADELKAFEFVR---TRTLTCYNG------VIGDGCGECPACKLRRAGLEQY 212


>gi|239906319|ref|YP_002953060.1| putative aluminum resistance protein [Desulfovibrio magneticus
           RS-1]
 gi|259551518|sp|C4XPJ3|QUEC_DESMR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|239796185|dbj|BAH75174.1| putative aluminum resistance protein [Desulfovibrio magneticus
           RS-1]
          Length = 235

 Score =  174 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 83/245 (33%), Positives = 117/245 (47%), Gaps = 31/245 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A++LFSGG DS+TCL+ A         LSF+YGQR+KVELE    V K +       
Sbjct: 6   PQKAVVLFSGGLDSTTCLAVARRDGFLPCALSFEYGQRHKVELEAARRVAKAMAVTTHLI 65

Query: 68  KDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                    LPL  +G  + ++      +  +   + ++P T+VP RN IFL  A   A 
Sbjct: 66  LP-------LPLGSIGGSALTADIDVPKDRDIGEMEADIPVTYVPARNTIFLSMALGWAE 118

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLKKY 178
            LG ++I IGV   DYSGYPDCR + I A E   NL ++  V       +HTPL+ L K 
Sbjct: 119 VLGASDIYIGVNALDYSGYPDCRPEFIAAFEAMANLAVKEAVEGRLAIRIHTPLLHLSKA 178

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK--- 235
              +L   +G      +    +H+CY          G  C  C +C LR+KG+ E     
Sbjct: 179 GIVELGTSLG------VDYGLTHSCYDP-----APDGLACGRCDSCLLRRKGFEEAGVAD 227

Query: 236 -EKYQ 239
             +Y+
Sbjct: 228 PTRYR 232


>gi|198276947|ref|ZP_03209478.1| hypothetical protein BACPLE_03152 [Bacteroides plebeius DSM 17135]
 gi|198270472|gb|EDY94742.1| hypothetical protein BACPLE_03152 [Bacteroides plebeius DSM 17135]
          Length = 221

 Score =  174 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 91/236 (38%), Positives = 134/236 (56%), Gaps = 16/236 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +     AL++FSGGQDS+TCL WA   F++V  LSF YGQ+++ E+E    + +K     
Sbjct: 1   MVNNKEALVVFSGGQDSTTCLFWAKKHFEKVYALSFLYGQKHEKEVELAREIARKAGVEF 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                S           LG  S +  + ++  +   ++ PNTFVPGRN+ FL  AA  A 
Sbjct: 61  EVMDVSFIGH-------LGKNSLTDTSIHMDEEKPKDSFPNTFVPGRNLFFLSIAAVYAR 113

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             GI ++V GV +TD+SGYPDCR   I+++   +NL ME    +HTPLMW+ K +TW LA
Sbjct: 114 EKGIHHMVTGVSQTDFSGYPDCRDSFIKSLNVTLNLAMEEQFVIHTPLMWIDKAQTWALA 173

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
            ++G   +++L+  E+ TCY G        G GC  CPAC LR++G  ++    Q+
Sbjct: 174 DELG---VLDLVRNETLTCYNGIP------GDGCGHCPACKLRREGLEKYLASKQN 220


>gi|289207755|ref|YP_003459821.1| exsB protein [Thioalkalivibrio sp. K90mix]
 gi|288943386|gb|ADC71085.1| exsB protein [Thioalkalivibrio sp. K90mix]
          Length = 227

 Score =  174 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 62/236 (26%), Positives = 96/236 (40%), Gaps = 24/236 (10%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + +   A++L SGG DS+TCL+ A         LS DYGQR++ EL+    V        
Sbjct: 1   MSQPEKAVVLLSGGLDSATCLAMARADGLDCHALSIDYGQRHRTELDAARRVAASQGVQD 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            +          + L  +G  + +     V  +  +      +VP RN +FL  A  LA 
Sbjct: 61  HRVV-------RVDLTAIGGSALTDDAIAVPTEASEGIPVT-YVPARNTVFLSLALGLAE 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKKYE 179
            L    + +G    DYSGYPDCR   I A      +   +        V  PLM + K E
Sbjct: 113 TLDARLLYVGANAVDYSGYPDCRPAFIDAFRDLAQVATRAGVEGVRWEVRAPLMHMSKAE 172

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
             +    +G      +   ++ +CY    D     G  C  C +C +R++G+    
Sbjct: 173 IIRAGASLG------VDYAQTVSCYQADPD-----GRACGRCDSCRIRREGFAAAG 217


>gi|269468715|gb|EEZ80340.1| PP-loop superfamily ATPase [uncultured SUP05 cluster bacterium]
          Length = 228

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 79/248 (31%), Positives = 112/248 (45%), Gaps = 29/248 (11%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M++  +    A++L SGG DS+T L+ A  +      LSFDYGQ+ K EL     + K+ 
Sbjct: 1   MSN--QNPEKAIVLLSGGLDSTTALAIAKSQGFECYALSFDYGQKQKSELNSAKKIAKQF 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                +          + L+  G  + +     V    Q + +P T+VP RN IFL +A 
Sbjct: 59  DATEHRIM-------SISLSDFGGSALTDKNIAVPDFKQSDEIPITYVPARNTIFLSYAL 111

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWL 175
             A  L   +I IGV  TDYSGYPDCR + I A E   NL  +       +TVHTPL+ L
Sbjct: 112 AWAEVLESQSIFIGVNSTDYSGYPDCRQEYITAFEIMANLATKQGIEGQKITVHTPLINL 171

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K +       +G      +    + TCY          G  C +C AC  R++G+    
Sbjct: 172 DKSQIITQGLSLG------IDYSLTTTCYQAD-----NEGKACGTCDACEYRKQGFKSAG 220

Query: 236 ----EKYQ 239
                KYQ
Sbjct: 221 ISDPTKYQ 228


>gi|261210909|ref|ZP_05925199.1| queuosine Biosynthesis QueC ATPase [Vibrio sp. RC341]
 gi|260839884|gb|EEX66484.1| queuosine Biosynthesis QueC ATPase [Vibrio sp. RC341]
          Length = 231

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 95/235 (40%), Positives = 150/235 (63%), Gaps = 21/235 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  FD V  ++FDYGQR+K+E+E    + K++        
Sbjct: 2   NKAVVVFSGGQDSTTCLVQALQEFDEVHAITFDYGQRHKLEIEVAQQLAKQLG------- 54

Query: 69  DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +    ++ +++L +++ SSLT++   V+ ++Q N LPN+FVPGRNI+FL  A   AY+
Sbjct: 55  --VTAHKVMDVSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQ 112

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G   ++ GVCETD+SGYPDCR++ ++++  ++  GM+  +T+ TPLMWL K ETW LA 
Sbjct: 113 IGAKTVITGVCETDFSGYPDCRNEFVQSMNQSLAKGMDMPLTIRTPLMWLNKAETWALAD 172

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
            +G    + L+ +++ TCY G        G GC  CPAC+LR+ G  ++ +   D
Sbjct: 173 QLGA---LELVRQQTLTCYNG------LIGDGCGECPACHLRKAGLNDYLDNRSD 218


>gi|329893689|ref|ZP_08269823.1| Queuosine Biosynthesis QueC ATPase [gamma proteobacterium IMCC3088]
 gi|328923616|gb|EGG30928.1| Queuosine Biosynthesis QueC ATPase [gamma proteobacterium IMCC3088]
          Length = 231

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 72/248 (29%), Positives = 106/248 (42%), Gaps = 28/248 (11%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN      P A++L SGG DS+T L+ A  +     TLSFDYGQR++ EL     +    
Sbjct: 1   MNQDANALPKAVILVSGGLDSATVLAMAHAQGFECYTLSFDYGQRHRAELIAAERISAGY 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++  K          L L  +G  + +     V     +      +VP RN IFL  A 
Sbjct: 61  PDVTHKVV-------TLNLDSIGGSALTDTAIAVPESPTEGIPIT-YVPARNTIFLSIAL 112

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM-----WL 175
             A  LG  +I IGV   DYSGYPDCR + I A E+  N+  ++ V  +   +      L
Sbjct: 113 GWAEVLGALDIFIGVNAVDYSGYPDCRPEFISAYESLANVATKAGVEGNHLRIQAPLSNL 172

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K E  +    +G      +    + +CY          G  C  C +C LR++G+    
Sbjct: 173 SKAEIIQQGSQLG------VDYSATVSCYQAD-----NQGRACGLCDSCRLRKEGFESAG 221

Query: 236 ----EKYQ 239
                +Y+
Sbjct: 222 VADPTRYK 229


>gi|29346976|ref|NP_810479.1| putative aluminum resistance protein [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29338874|gb|AAO76673.1| putative aluminum resistance protein [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 220

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 95/236 (40%), Positives = 141/236 (59%), Gaps = 22/236 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +    +AL++FSGGQDS+TCL WA   F +V  LSF YGQ+++ E+E    + +K     
Sbjct: 1   MMNRETALVVFSGGQDSTTCLFWAKRNFKKVYALSFLYGQKHQKEVELAREIARKAE--- 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN---LPNTFVPGRNIIFLVFAAT 121
                   E  ++ ++ +G + H+SLT    +  Q+     +PNTFVPGRN+ FL  AA 
Sbjct: 58  -------VEFDVMDVSFIGTLGHNSLTDTTMVMDQEKPAGSVPNTFVPGRNLFFLSIAAV 110

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            A   GI ++V GV +TD+SGYPDCR   I+++   +NL M+    +HTPLMW+ K ETW
Sbjct: 111 YARERGINHLVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETW 170

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            LA ++G   +++LI  E+ TCY G +      G GC  CPAC LR++G  ++ +K
Sbjct: 171 ALADELG---VLDLIRNETLTCYNGIQ------GDGCGHCPACTLRREGLEKYLKK 217


>gi|302343484|ref|YP_003808013.1| exsB protein [Desulfarculus baarsii DSM 2075]
 gi|301640097|gb|ADK85419.1| exsB protein [Desulfarculus baarsii DSM 2075]
          Length = 234

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 76/239 (31%), Positives = 110/239 (46%), Gaps = 27/239 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           + P A++L SGG DS+TCL+ A D+      LSF YGQR+ VEL     V + +      
Sbjct: 6   QKPPAVVLLSGGLDSATCLAMANDQGFEPHALSFRYGQRHAVELLAAQRVAQALGARRHL 65

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMK---IQDNNLPNTFVPGRNIIFLVFAATLA 123
             D       + L  +G  + ++       +      + +P T+VP RN +FL  A   A
Sbjct: 66  ILD-------VDLRGVGGSALTADMAVPKGRSLAEMTDGVPVTYVPARNTLFLSLALAWA 118

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES------HVTVHTPLMWLKK 177
             L   +I IGV   DYSGYPDCR + I A E   NL  +       ++ VH PL+ + K
Sbjct: 119 ETLDCADIFIGVNALDYSGYPDCRPEFILAFENLANLATKMSTEQGRYIRVHAPLIRMTK 178

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            +  +    +G      +    +H+CY    D     G  C  C +C LR KG+ E K 
Sbjct: 179 AQIIRAGLALG------VDYGLTHSCYDPDAD-----GKPCGQCDSCLLRAKGFAEAKT 226


>gi|86742063|ref|YP_482463.1| ExsB [Frankia sp. CcI3]
 gi|110816226|sp|Q2J7K8|QUEC_FRASC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|86568925|gb|ABD12734.1| preQ(0) biosynthesis protein QueC [Frankia sp. CcI3]
          Length = 236

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 77/235 (32%), Positives = 111/235 (47%), Gaps = 24/235 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             P+A++L SGG DS+T L+ A  +      LSF YGQR++VEL     V   +  +   
Sbjct: 13  PRPAAVVLLSGGLDSATVLAIANQQGFACHALSFRYGQRHEVELAAARRVASALGVVRHV 72

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D       + L + G  + +  T  V        +P T+VP RN IFL F   LA   
Sbjct: 73  VVD-------IDLGVFGGSALTDPTIAVPAAGTAEEIPVTYVPARNTIFLSFGLALAETA 125

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLKKYET 180
           G  ++ IG    DYSGYPDCR + + A +   NL  ++ V      +VH PLM L K +T
Sbjct: 126 GAWDVFIGASSVDYSGYPDCRPEYLAAYQAMANLATKATVSGERTLSVHAPLMHLSKADT 185

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            +L   +G      +    +H+CY    D     G  C  C +C LR++G+ E  
Sbjct: 186 IRLGLSLG------VDYGLTHSCYDPGPD-----GRPCGRCDSCSLRERGFTEVG 229


>gi|254228267|ref|ZP_04921696.1| ExsB protein [Vibrio sp. Ex25]
 gi|262394170|ref|YP_003286024.1| queuosine Biosynthesis QueC ATPase [Vibrio sp. Ex25]
 gi|151939340|gb|EDN58169.1| ExsB protein [Vibrio sp. Ex25]
 gi|262337764|gb|ACY51559.1| queuosine Biosynthesis QueC ATPase [Vibrio sp. Ex25]
          Length = 231

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 98/231 (42%), Positives = 138/231 (59%), Gaps = 15/231 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  FD V  ++FDYGQR+K+E+E    + K +     K  
Sbjct: 2   KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQNIAKDLGVKAHKVM 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D      +  L  L   S +     V+ ++Q+N LPN+FVPGRNI+FL  A   AY++G 
Sbjct: 62  D------VGLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIGA 115

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++ GVCETD+SGYPDCR D ++A+ TA+  GM+ ++T+ TPLMWL K ETW LA    
Sbjct: 116 ETVITGVCETDFSGYPDCRDDFVKAMNTALVKGMDRNLTIKTPLMWLNKAETWALADQ-- 173

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
             D + L+ E + TCY G        G GC  CP+C LR+ G  ++    +
Sbjct: 174 -YDALQLVRENTLTCYNG------VIGDGCGDCPSCDLRKAGLDDYLNNKE 217


>gi|291483907|dbj|BAI84982.1| hypothetical protein BSNT_02306 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 219

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 96/229 (41%), Positives = 148/229 (64%), Gaps = 20/229 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WAL  F+ VET++F Y QR+  E+E    + +K+      
Sbjct: 2   KKEKAIVVFSGGQDSTTCLLWALKEFEEVETVTFHYNQRHSQEIEVAKSIAEKLG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 ++H+L +++L  ++ ++LT+ ++ ++++D  LP+TFVPGRN++FL FA+ LA++
Sbjct: 57  -----VKNHLLDMSLLNQLAPNALTRNDIEIEVKDGELPSTFVPGRNLVFLSFASILAFQ 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G  +I+ GVCETD+SGYPDCR + +++    +NL ME    +HTPLMWL K ETWKL  
Sbjct: 112 IGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIHTPLMWLNKAETWKLVD 171

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           ++G  + V      + TCY G          GC  CPAC+LR KG+ E+
Sbjct: 172 ELGALEFVK---NNTLTCYNGI------IADGCGECPACHLRSKGYEEY 211


>gi|153833106|ref|ZP_01985773.1| ExsB protein [Vibrio harveyi HY01]
 gi|156974666|ref|YP_001445573.1| queuosine biosynthesis protein QueC [Vibrio harveyi ATCC BAA-1116]
 gi|167016455|sp|A7MW43|QUEC_VIBHB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|148870674|gb|EDL69581.1| ExsB protein [Vibrio harveyi HY01]
 gi|156526260|gb|ABU71346.1| hypothetical protein VIBHAR_02384 [Vibrio harveyi ATCC BAA-1116]
          Length = 232

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 97/226 (42%), Positives = 134/226 (59%), Gaps = 15/226 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  FD V  ++FDYGQR+K+E+E    V K +     K  
Sbjct: 2   KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAEKVAKDLGVAAHKVM 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D      +  L  L   S +     V+ ++Q+N LPN+FVPGRNI+FL  A   AY++G 
Sbjct: 62  D------VGLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIGA 115

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++ GVCETD+SGYPDCR D ++A+ +A+  GM+    + TPLMWL K ETW LA    
Sbjct: 116 ETVITGVCETDFSGYPDCRDDFVKAMNSALVKGMDRQFEIKTPLMWLNKAETWALADQ-- 173

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
             D + L+ E + TCY G        G GC  CP+C LR+ G  ++
Sbjct: 174 -YDALQLVRESTLTCYNGI------IGDGCGDCPSCDLRKAGLDDY 212


>gi|315180244|gb|ADT87158.1| queuosine biosynthesis protein QueC [Vibrio furnissii NCTC 11218]
          Length = 229

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 98/231 (42%), Positives = 141/231 (61%), Gaps = 15/231 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  FD V  ++FDYGQR+K+E+E    + KK+     K  
Sbjct: 2   KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQTLAKKLGVKAHKVM 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D      +  L  L   S +     V+ ++Q+N LPN+FVPGRNI+FL  A   AY++G 
Sbjct: 62  D------VGLLNELAISSLTRDDIPVSNELQENGLPNSFVPGRNILFLTLAGIYAYQIGA 115

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++ GVCETD+SGYPDCR+D ++A+ +A+ LGM+  + + TPLMWL K ETW +A   G
Sbjct: 116 QTVITGVCETDFSGYPDCRNDFVKAMNSALVLGMDRELEIRTPLMWLNKAETWAMADQNG 175

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
               + L+  E+ TCY G        G GC  CP+C+LR+ G  ++ E  +
Sbjct: 176 A---LELVRHETLTCYNGI------MGDGCGDCPSCHLRKVGLNDYLEHRE 217


>gi|319652976|ref|ZP_08007081.1| aluminum resistance protein [Bacillus sp. 2_A_57_CT2]
 gi|317395325|gb|EFV76058.1| aluminum resistance protein [Bacillus sp. 2_A_57_CT2]
          Length = 219

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 95/226 (42%), Positives = 144/226 (63%), Gaps = 21/226 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   AL++FSGGQDS+TCL WA +RF+ VE ++F+Y QR+K+E+EC   + K++      
Sbjct: 2   KNDKALVVFSGGQDSTTCLFWAKERFEEVEAVTFNYNQRHKLEIECAQQIAKELG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKI--QDNNLPNTFVPGRNIIFLVFAATLAY 124
                   HIL +++L  ++ ++LT++       ++  LP+TFVPGRN++FL FA  LA 
Sbjct: 57  -----IRHHILDMSLLNQLAPNALTRDEIKVKDGEEGGLPSTFVPGRNLLFLSFAGVLAS 111

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++   +I+ GVCETD+SGYPDCR   I+++   +NL M+    +HTPLMWL K ETWKLA
Sbjct: 112 QINAKHIITGVCETDFSGYPDCRDIFIKSLNVTLNLSMDEQFVIHTPLMWLNKAETWKLA 171

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
            ++   + ++ + E++ TCY G          GC  CPAC+LR+ G
Sbjct: 172 DEL---NALDYVREKTLTCYNGIP------ADGCGECPACHLRKNG 208


>gi|153836122|ref|ZP_01988789.1| ExsB protein [Vibrio parahaemolyticus AQ3810]
 gi|149750397|gb|EDM61142.1| ExsB protein [Vibrio parahaemolyticus AQ3810]
          Length = 232

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 97/226 (42%), Positives = 136/226 (60%), Gaps = 15/226 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  FD V  ++FDYGQR+K+E+E    + K +     K  
Sbjct: 2   KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEIAQKIAKDLGVKAHKVM 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D      +  L  L   S +     V+ ++Q+N LPN+FVPGRNI+FL  A   AY++G 
Sbjct: 62  D------VGLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIGA 115

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++ GVCETD+SGYPDCR D ++++ TA+  GM+  +T+ TPLMWL K ETW LA    
Sbjct: 116 DTVITGVCETDFSGYPDCRDDFVKSMNTALAKGMDRALTIKTPLMWLNKAETWALADQ-- 173

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
             + + L+ E + TCY G        G GC  CP+C LR+ G  E+
Sbjct: 174 -YNALQLVRENTLTCYNGI------IGDGCGDCPSCDLRKAGLDEY 212


>gi|281358519|ref|ZP_06244999.1| exsB protein [Victivallis vadensis ATCC BAA-548]
 gi|281315001|gb|EFA99034.1| exsB protein [Victivallis vadensis ATCC BAA-548]
          Length = 225

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 72/242 (29%), Positives = 104/242 (42%), Gaps = 27/242 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T L+ A        T+SFDYGQR++ ELE    +   +  +   
Sbjct: 1   MNKRAVILLSGGLDSATVLAIAGSEGFDCYTMSFDYGQRHRCELEAAGRIAAALGAVKHN 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     + L   G  + +     V      + +P T+VP RN+IFL FA   A  L
Sbjct: 61  TVK-------IDLRQWGGSALTDDALAVPDAEDSHGIPITYVPARNLIFLSFATAWAEVL 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKKYETW 181
           G  +I IGV   DYSGYPDCR   I + +    LG  +     H +++ PL  L K E  
Sbjct: 114 GARDIFIGVNSVDYSGYPDCRPKFIESFQETARLGTCAVDEGWHYSINAPLQNLSKAEII 173

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EK 237
           +    +G      +    + +CY          G  C  C +C LR  G+ E       +
Sbjct: 174 RRGVALG------VDYGLTTSCYNPD-----SEGRSCGKCASCSLRIAGFREAGVPDPTR 222

Query: 238 YQ 239
           Y 
Sbjct: 223 YH 224


>gi|314933023|ref|ZP_07840389.1| ExsB protein [Staphylococcus caprae C87]
 gi|313654342|gb|EFS18098.1| ExsB protein [Staphylococcus caprae C87]
          Length = 223

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 89/237 (37%), Positives = 141/237 (59%), Gaps = 20/237 (8%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M         A+++FSGGQDS+TCL +A   F  VE ++F+YGQR+  E+E    +    
Sbjct: 1   MTKSTLDKDKAIVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDTEIEVARKIA--- 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                   +   + HIL +++L  ++ ++LT  ++ ++  ++ +PNTFVP RN++FL FA
Sbjct: 58  -------NEQNLKHHILDMSLLSQLTPNALTQHDLEIEENEDGIPNTFVPARNLLFLSFA 110

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
             LAY++   +I+ GVCETD+SGYPDCR   I+++   ++L M+    +HTPLMWL K +
Sbjct: 111 GALAYQVNAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLSMDKDFVIHTPLMWLDKAQ 170

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           TW+L+ ++G   +++ I   + TCY G        G GC  CPAC LR +G   + E
Sbjct: 171 TWELSDELG---VLDYIRHHTLTCYNGI------IGDGCGECPACKLRARGLHHYLE 218


>gi|48478380|ref|YP_024086.1| hypothetical protein PTO1308 [Picrophilus torridus DSM 9790]
 gi|74567352|sp|Q6KZF9|QUEC_PICTO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|48431028|gb|AAT43893.1| hypothetical protein PTO1308 [Picrophilus torridus DSM 9790]
          Length = 239

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 77/241 (31%), Positives = 114/241 (47%), Gaps = 31/241 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+ L SGG DS T L++AL     V  LSFDYGQR+K ELE    +       +   K 
Sbjct: 3   RAVCLLSGGLDSPTVLAYALSNGYEVFPLSFDYGQRHKKELESSKKICDYYHLNLKIIK- 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQ--DNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                  + L  +G  + +         ++   N++P T+VP RN IFL  AA  A  L 
Sbjct: 62  -------IDLRAIGHSALTDNIDVPENDLKSIGNDIPVTYVPARNTIFLSIAAAYAETLN 114

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM----ESHVTVHTPLMWLKKYETWKL 183
              I IG    DYSGYPDCR +    +E A++LG      + + ++ PL +L K +  KL
Sbjct: 115 ANEIFIGANAIDYSGYPDCRPEYFNKMEEALSLGTSIGLRNGIKINVPLQYLTKSDIVKL 174

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQ 239
            + +       +  + + +CY G++         C  C +C LR KG+ME       +Y+
Sbjct: 175 GRKL------KVPYKLTWSCYNGRKK-------ACGKCDSCLLRLKGFMEAGDFDDIEYE 221

Query: 240 D 240
           D
Sbjct: 222 D 222


>gi|218130072|ref|ZP_03458876.1| hypothetical protein BACEGG_01658 [Bacteroides eggerthii DSM 20697]
 gi|317476564|ref|ZP_07935811.1| exsB protein [Bacteroides eggerthii 1_2_48FAA]
 gi|217987792|gb|EEC54119.1| hypothetical protein BACEGG_01658 [Bacteroides eggerthii DSM 20697]
 gi|316907307|gb|EFV29014.1| exsB protein [Bacteroides eggerthii 1_2_48FAA]
          Length = 231

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 94/235 (40%), Positives = 133/235 (56%), Gaps = 18/235 (7%)

Query: 2   NDIIKKAPS--ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           N +I +     AL++FSGGQDS+TCL WA   F +V  LSF YGQ+++ E++    + +K
Sbjct: 8   NKLISRVNKEAALVVFSGGQDSTTCLFWAKREFKKVYALSFLYGQKHRKEVDLAREIARK 67

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                     SL       +  LG  S +     +  +   ++ PNTFVPGRN+ FL  A
Sbjct: 68  AGVEFEVMDVSL-------IGKLGRNSLTDTGMAMDEEKPADSFPNTFVPGRNLFFLSIA 120

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           A  A   GI +IV GV +TD+SGYPDCR   I+++   +NL M+     HTPLMW+ K E
Sbjct: 121 AVYAREKGINHIVTGVSQTDFSGYPDCRDTFIKSLNVTLNLAMDGQFVFHTPLMWIDKAE 180

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           TW LA ++G   +++LI  E+ TCY G        G GC  CPAC LR++G  ++
Sbjct: 181 TWALADELG---VLDLIRHETLTCYNGIP------GDGCGHCPACKLRREGLEKY 226


>gi|169828574|ref|YP_001698732.1| queuosine biosynthesis protein [Lysinibacillus sphaericus C3-41]
 gi|254764358|sp|B1HPF6|QUEC_LYSSC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|168993062|gb|ACA40602.1| Queuosine biosynthesis protein [Lysinibacillus sphaericus C3-41]
          Length = 219

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 95/230 (41%), Positives = 142/230 (61%), Gaps = 21/230 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WA +RF  +E ++F+YGQR+++E+EC   + +++      
Sbjct: 2   KQEKAIVVFSGGQDSTTCLFWAKERFAEIEAVTFNYGQRHRLEIECAEQIAEELG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVA--MKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 + HIL + +L  ++ ++LT+        Q+  LP+TFVPGRN++FL FA  LA 
Sbjct: 57  -----IKHHILDMTLLNQLAPNALTRQDIKVEDGQNGELPSTFVPGRNLLFLSFAGVLAS 111

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++G  +IV GVCETD+SGYPDCR   I+++   +NL M++   + TPLMWL K +TW+LA
Sbjct: 112 QIGAKHIVTGVCETDFSGYPDCRDVFIKSLNVTLNLSMDNSFVIDTPLMWLNKAQTWELA 171

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    +  + E + TCY G          GC  CPAC LR+KG  E+
Sbjct: 172 DQFGA---LEFVRERTLTCYNG------VIADGCGECPACKLRKKGLDEY 212


>gi|153953061|ref|YP_001393826.1| transcriptional regulator [Clostridium kluyveri DSM 555]
 gi|219853712|ref|YP_002470834.1| hypothetical protein CKR_0369 [Clostridium kluyveri NBRC 12016]
 gi|189038909|sp|A5N597|QUEC_CLOK5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764326|sp|B9DYU5|QUEC_CLOK1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|146345942|gb|EDK32478.1| Predicted transcriptional regulator [Clostridium kluyveri DSM 555]
 gi|219567436|dbj|BAH05420.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 226

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 77/239 (32%), Positives = 118/239 (49%), Gaps = 29/239 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+T L  A  +   V  +SFDYGQR+K E++C   V            
Sbjct: 2   KKAVVLLSGGLDSTTVLYLAKSQGYEVYAMSFDYGQRHKKEIQCARDVASGTGAADFVLV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQD-NNLPNTFVPGRNIIFLVFAATLAYRLG 127
                     +   G  + +  +  V    ++   +P T+VP RN+IFL +AA+ A  +G
Sbjct: 62  -------TTNMNAWGGSALTDNSIKVPEFNEESEKIPVTYVPARNMIFLSYAASYAETIG 114

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG------MESHVTVHTPLMWLKKYETW 181
             +I IGV E DYSGY DCRH+ I ++E  INLG       + ++ +H P ++  K E  
Sbjct: 115 AYDIFIGVSEVDYSGYVDCRHEFIDSMEKTINLGTVCAVEHKKYIKIHAPFLYKTKSEEI 174

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
           K+  D+G      +  E++ TCY G+        + C  C +C LR + + E    Y+D
Sbjct: 175 KIGMDLG------VKYEKTWTCYNGEE-------FACGICDSCRLRLEAFKEAG--YKD 218


>gi|163800818|ref|ZP_02194718.1| exsB protein [Vibrio sp. AND4]
 gi|159175167|gb|EDP59964.1| exsB protein [Vibrio sp. AND4]
          Length = 232

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 96/226 (42%), Positives = 133/226 (58%), Gaps = 15/226 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  FD V  ++FDYGQR+K+E+E    V + +     K  
Sbjct: 2   KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAEKVAQDLGVTAHKVM 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D      +  L  L   S +     V+  +Q+N LPN+FVPGRNI+FL  A   AY++G 
Sbjct: 62  D------VGLLNELAISSLTRDDIPVSHDLQENGLPNSFVPGRNILFLTLAGIYAYQIGA 115

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++ GVCETD+SGYPDCR D ++A+ +A+  GM+    + TPLMWL K ETW LA    
Sbjct: 116 ETVITGVCETDFSGYPDCRDDFVKAMNSALVKGMDRQFEIKTPLMWLNKAETWALADQ-- 173

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
             D + L+ E + TCY G        G GC  CP+C LR+ G  ++
Sbjct: 174 -YDALQLVRENTLTCYNGI------IGDGCGDCPSCDLRKAGLDDY 212


>gi|50085674|ref|YP_047184.1| hypothetical protein ACIAD2601 [Acinetobacter sp. ADP1]
 gi|81392613|sp|Q6F9A3|QUEC_ACIAD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|49531650|emb|CAG69362.1| Queuosine biosynthesis protein queC [Acinetobacter sp. ADP1]
          Length = 229

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 77/247 (31%), Positives = 111/247 (44%), Gaps = 30/247 (12%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN      P A++L SGG DS+TCL+WA  R      LSF YGQR+  EL+    + +  
Sbjct: 1   MNGEFGMRPRAIVLLSGGLDSTTCLAWAQAR-YECMALSFMYGQRSTTELDAAKAIAQNA 59

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                           + LA LG  + +    +V  ++Q+      +VP RN IFL +A 
Sbjct: 60  GVEHRVIN--------IDLANLGGSALTDHNIDVPEQLQEGIPVT-YVPARNTIFLSYAL 110

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWL 175
             A   G   IVIGV   DYSGYPDCR + I+A      L  ++ V        TPL+ L
Sbjct: 111 AAAEVFGAEAIVIGVNAVDYSGYPDCRPEYIQAFTNMARLATKAGVEGKPLTFETPLLHL 170

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K    +L  + G      +   ++ +CY          G  C  C +C LR++G++E  
Sbjct: 171 SKANIIRLGIEHG------VDYSQTVSCYQAD-----AQGRACGKCDSCRLRKQGFIEAG 219

Query: 236 ----EKY 238
                +Y
Sbjct: 220 VTDPTRY 226


>gi|260768532|ref|ZP_05877466.1| queuosine Biosynthesis QueC ATPase [Vibrio furnissii CIP 102972]
 gi|260616562|gb|EEX41747.1| queuosine Biosynthesis QueC ATPase [Vibrio furnissii CIP 102972]
          Length = 229

 Score =  173 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 98/231 (42%), Positives = 141/231 (61%), Gaps = 15/231 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  FD V  ++FDYGQR+K+E+E    + KK+     K  
Sbjct: 2   KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQTLAKKLGVKAHKVM 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D      +  L  L   S +     V+ ++Q+N LPN+FVPGRNI+FL  A   AY++G 
Sbjct: 62  D------VGLLNELAISSLTRDDIPVSNELQENGLPNSFVPGRNILFLTLAGIYAYQIGA 115

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++ GVCETD+SGYPDCR+D ++A+ +A+ LGM+  + + TPLMWL K ETW +A   G
Sbjct: 116 QTVITGVCETDFSGYPDCRNDFVKAMNSALVLGMDRELEICTPLMWLNKAETWAMADQNG 175

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
               + L+  E+ TCY G        G GC  CP+C+LR+ G  ++ E  +
Sbjct: 176 A---LELVRHETLTCYNGI------MGDGCGDCPSCHLRKVGLNDYLEHRE 217


>gi|60680908|ref|YP_211052.1| putative ExsB family protein [Bacteroides fragilis NCTC 9343]
 gi|253563256|ref|ZP_04840713.1| queuosine biosynthesis protein queC [Bacteroides sp. 3_2_5]
 gi|265762860|ref|ZP_06091428.1| queuosine biosynthesis protein queC [Bacteroides sp. 2_1_16]
 gi|81316024|sp|Q5LFI6|QUEC_BACFN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|110816210|sp|Q64WB0|QUEC_BACFR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|60492342|emb|CAH07108.1| putative ExsB family protein [Bacteroides fragilis NCTC 9343]
 gi|251947032|gb|EES87314.1| queuosine biosynthesis protein queC [Bacteroides sp. 3_2_5]
 gi|263255468|gb|EEZ26814.1| queuosine biosynthesis protein queC [Bacteroides sp. 2_1_16]
 gi|301162471|emb|CBW22017.1| putative ExsB family protein [Bacteroides fragilis 638R]
          Length = 219

 Score =  173 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 94/231 (40%), Positives = 128/231 (55%), Gaps = 16/231 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SA++LFSGGQDS+TCL WA   F +V  LSF YGQ++  E+E    + ++       
Sbjct: 2   KNDSAVVLFSGGQDSTTCLFWAKKHFKKVYALSFLYGQKHAHEVELARGIAERAGVEFHV 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              S        +  LG  S +  + ++      ++ PNTFVPGRN+ FL  AA  A   
Sbjct: 62  MDTSF-------IGSLGSNSLTDTSISMDEDKPKDSFPNTFVPGRNLFFLSIAAVFAREQ 114

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G  ++V GV +TDYSGYPDCR   I+++   +NL M+    +HTPLMW+ K ETW LA +
Sbjct: 115 GAFHLVTGVSQTDYSGYPDCRDSFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWALADE 174

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +G  DLV     E+ TCY G          GC  CPAC LR++G  E+  K
Sbjct: 175 LGVFDLVR---NETLTCYNGIP------ADGCGHCPACKLRKQGLEEYLSK 216


>gi|82750414|ref|YP_416155.1| aluminum resistance protein [Staphylococcus aureus RF122]
 gi|110816265|sp|Q2YSL9|QUEC_STAAB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|82655945|emb|CAI80349.1| probable aluminum resistance protein [Staphylococcus aureus RF122]
          Length = 222

 Score =  173 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 91/235 (38%), Positives = 147/235 (62%), Gaps = 20/235 (8%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +     A+++FSGGQDS+TCL +A   F  VE ++F+YGQR+  E+E    + +    
Sbjct: 2   ESVLNNEKAIVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDTEIEVAKQIAQ---- 57

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                 D   + H+L +++L  ++ ++LT  ++ +   ++ +PNTFVP RN++FL FA  
Sbjct: 58  ------DQGMKHHVLDMSLLSQLTPNALTQHDMEITNNEDGIPNTFVPARNLLFLSFAGA 111

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           LAY++G  +I+ GVCETD+SGYPDCR   I+++   ++L M+    +HTPLMWL K ETW
Sbjct: 112 LAYQIGAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLAMDKDCVIHTPLMWLNKAETW 171

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           KL+ ++   ++++ I  ++ TCY G        G GC  CPAC+LRQ+G  ++ E
Sbjct: 172 KLSDEL---EVLDYIRTKTLTCYNGI------IGDGCGECPACHLRQRGLNQYLE 217


>gi|294498041|ref|YP_003561741.1| queuosine biosynthesis protein QueC [Bacillus megaterium QM B1551]
 gi|294347978|gb|ADE68307.1| queuosine biosynthesis protein QueC [Bacillus megaterium QM B1551]
          Length = 220

 Score =  173 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 91/229 (39%), Positives = 138/229 (60%), Gaps = 20/229 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WAL  F  VET++F YGQR+  E+E    +   +      
Sbjct: 2   KNEKAIVVFSGGQDSTTCLFWALKNFKEVETVTFQYGQRHSQEIEVAKAIAADLG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 +  +L +++L  ++ ++LT  ++ ++ ++  LP TFV GRN++FL FAA LA  
Sbjct: 57  -----VKHTVLDMSLLNQLAPNALTRDDIEIEQKEGELPTTFVDGRNLLFLSFAAVLAKN 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G  +IV GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K ETW LA 
Sbjct: 112 SGGRHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDFEFVIHTPLMWIDKAETWALAD 171

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           ++G    +  + E++ TCY G          GC  CPAC LR++G  ++
Sbjct: 172 ELGA---LEYVREKTLTCYNGIV------ADGCGECPACQLRKRGLDQY 211


>gi|298504610|gb|ADI83333.1| 7-cyano-7-deazaguanine synthase [Geobacter sulfurreducens KN400]
          Length = 237

 Score =  173 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 80/237 (33%), Positives = 112/237 (47%), Gaps = 29/237 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L+SGG DS+TCL+ A         +SF YGQR+ VELE      +    +   
Sbjct: 1   MTRKAVVLYSGGLDSTTCLAIARAEGFEPHAMSFSYGQRHSVELELAKRNARPAGAV--- 57

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ--DNNLPNTFVPGRNIIFLVFAATLAY 124
                  +H++    L  +  S+LT ++A+  +   +++P T+VP RN IFL FA   A 
Sbjct: 58  -------EHMVVEFDLRKVGGSALTADIAVPKEGVGDDIPVTYVPARNTIFLSFALGWAE 110

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME------SHVTVHTPLMWLKKY 178
            LG  +I IGV   DYSGYPDCR + I A ET  NL             +H PLM L K 
Sbjct: 111 VLGAFDIFIGVNALDYSGYPDCRPEYISAFETMANLATRLGVEGTGRFRIHAPLMRLTKA 170

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           E  +    +G      +    +H+CY          G  C  C +C LR KG+ E  
Sbjct: 171 EIIRKGLALG------VDYGLTHSCYDP-----SPAGVACGLCDSCRLRLKGFAEVG 216


>gi|167461682|ref|ZP_02326771.1| Aluminum resistance protein [Paenibacillus larvae subsp. larvae
           BRL-230010]
 gi|322383446|ref|ZP_08057226.1| pre-queuosine 0 synthase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321152247|gb|EFX45073.1| pre-queuosine 0 synthase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 223

 Score =  173 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 94/232 (40%), Positives = 148/232 (63%), Gaps = 20/232 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WAL +F  VET++FDYGQR+ +E++    + +++      
Sbjct: 2   KQEKAIVVFSGGQDSTTCLFWALRQFGEVETVTFDYGQRHSLEMKVAKSIAEELG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 +  +L +++L  ++ S+LT K++A++ ++   P+TFV GRN++FL FAA +A +
Sbjct: 57  -----LKHTVLDMSLLNQLAPSALTRKDMAIEEKEGEPPSTFVDGRNMLFLTFAAVMAKQ 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G  ++V GVCETD+SGYPDCR   I+++   +NL M+    +HTPLMWL K +TW+LA 
Sbjct: 112 AGARHLVTGVCETDFSGYPDCRDAFIKSLNVTLNLAMDYPFVIHTPLMWLNKAQTWELAD 171

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            +G  + V    E++ TCY G        G GC  CPAC LR  G  +++++
Sbjct: 172 QLGAYEFVK---EKTLTCYNG------VMGSGCGECPACKLRNAGLKQYEQQ 214


>gi|326203400|ref|ZP_08193264.1| exsB protein [Clostridium papyrosolvens DSM 2782]
 gi|325986220|gb|EGD47052.1| exsB protein [Clostridium papyrosolvens DSM 2782]
          Length = 226

 Score =  173 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 81/241 (33%), Positives = 118/241 (48%), Gaps = 33/241 (13%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T L  A  +   +  +SF+YGQR+  ELEC   + +K       
Sbjct: 1   MLKKAVVLLSGGMDSTTALYIAKSQGYEIYAISFNYGQRHFKELECAKIISEKAG----- 55

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                 ++HI+    +     S+LT +        I +  +P T+VP RN+IFL FAA+ 
Sbjct: 56  -----VKEHIIVNTNMDAWGGSALTDSSISVPDSNIHNGKIPITYVPARNMIFLSFAASY 110

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES------HVTVHTPLMWLK 176
           A  +G  +I IGV E DYSGY DCR + I A+E AIN G          + +H PL+ + 
Sbjct: 111 AEVIGAQDIFIGVSEVDYSGYVDCRQEFIDAMENAINFGTVCAVEEGKKIKIHAPLVCMT 170

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           K +  KL   +G      +    + TCY G+          C +C +C LR K + E  E
Sbjct: 171 KSDEIKLGIKLG------VDYSLTWTCYRGEE-------LACGTCDSCSLRLKAFKEAGE 217

Query: 237 K 237
           K
Sbjct: 218 K 218


>gi|328468976|gb|EGF39936.1| queuosine biosynthesis protein QueC [Vibrio parahaemolyticus 10329]
          Length = 232

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 97/226 (42%), Positives = 136/226 (60%), Gaps = 15/226 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  FD V  ++FDYGQR+K+E+E    + K +     K  
Sbjct: 2   KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQKIAKDLGVKAHKVM 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D      +  L  L   S +     V+ ++Q+N LPN+FVPGRNI+FL  A   AY++G 
Sbjct: 62  D------VGLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIGA 115

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++ GVCETD+SGYPDCR D ++++ TA+  GME  +T+ TPLMWL K ETW LA    
Sbjct: 116 DTVITGVCETDFSGYPDCRDDFVKSMNTALVKGMERALTIKTPLMWLNKAETWALADQ-- 173

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
             + + L+ E + TCY G        G GC  CP+C LR+ G  ++
Sbjct: 174 -YNALQLVRENTLTCYNGI------IGDGCGDCPSCDLRKAGLDDY 212


>gi|313202055|ref|YP_004040713.1| exsb protein [Methylovorus sp. MP688]
 gi|312441371|gb|ADQ85477.1| exsB protein [Methylovorus sp. MP688]
          Length = 225

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 69/242 (28%), Positives = 104/242 (42%), Gaps = 28/242 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +  A++L SGG DS+T L+ A  +      LS DY QR+  EL     V + +     K
Sbjct: 1   MSKKAVVLLSGGLDSATVLAIARSQGYECYCLSLDYHQRHSAELLAAQRVAECLGAAEHK 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     L L++ G  + +    +V     +      +VP RN I L  A   A  L
Sbjct: 61  TVQ-------LDLSLFGGSALTDNRIDVPQSPTEGIPVT-YVPARNTIMLSLALAWAEVL 112

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETW 181
              +I IGV   DYSGYPDCR + +RA ++  NL  +       +TVH PL+ L K +  
Sbjct: 113 KSRDIFIGVNALDYSGYPDCRAEYVRAFQSMANLATKAAVEGDTITVHAPLIDLSKADIV 172

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EK 237
           K    +G           + +CY    +     G  C  C +C  R++G++        +
Sbjct: 173 KRGSALG------FDYGMTVSCYQADEE-----GRACGKCDSCRFRREGFLAAGLADPTR 221

Query: 238 YQ 239
           YQ
Sbjct: 222 YQ 223


>gi|229592291|ref|YP_002874410.1| putative transcriptional regulator [Pseudomonas fluorescens SBW25]
 gi|259551561|sp|C3JYR8|QUEC_PSEFS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|229364157|emb|CAY51802.1| putative transcriptional regulatory protein [Pseudomonas
           fluorescens SBW25]
          Length = 224

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 66/234 (28%), Positives = 100/234 (42%), Gaps = 24/234 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A++L SGG DS+T ++ A  +     T+SFDYGQR++ EL     V + +  +  K 
Sbjct: 3   QKRAVILLSGGLDSATVVAMAQAQGYSCYTMSFDYGQRHRAELNAAARVARDMGVVEHKV 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    L L  +G  + +  + +V     +      +VP RN +FL  A   A  L 
Sbjct: 63  IG-------LNLNGIGGSALTDSSIDVPEAPSEGIPVT-YVPARNTVFLSLALGWAEVLN 114

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWK 182
             +I IGV   DYSGYPDCR + + + E   NL  +         +  PL  L K +  K
Sbjct: 115 ARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFRILAPLQNLSKADIVK 174

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
               +G      +    + +CY    D     G  C  C +C LR +G+     
Sbjct: 175 AGVGLG------VDYSLTVSCYQADDD-----GRACGKCDSCRLRAEGFQAAGI 217


>gi|119511109|ref|ZP_01630227.1| hypothetical protein N9414_16856 [Nodularia spumigena CCY9414]
 gi|119464204|gb|EAW45123.1| hypothetical protein N9414_16856 [Nodularia spumigena CCY9414]
          Length = 234

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 73/237 (30%), Positives = 106/237 (44%), Gaps = 29/237 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DSST L  A         +SFDY QR++ EL     V + +  +  +  +
Sbjct: 11  KAVILLSGGLDSSTVLYQAKADGYECHPISFDYQQRHRRELHSAFLVAQTLGVVKHQVVN 70

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKI----QDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    L + G  + +  T N+  +        N+P T+VP RN IFL FA   A  
Sbjct: 71  -------FDLRLWGGSALTDETINLPQERSLDEMSQNIPVTYVPARNTIFLSFALGYAEA 123

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKKYET 180
           +    + IGV   DYSGYPDCR D I+A++    LG +       + +  PL+ LKK E 
Sbjct: 124 IAAQRVYIGVNALDYSGYPDCRPDYIQAMQKVFQLGTKQGREGNPIKIVAPLIDLKKTEI 183

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            +L   +G      +  E + +CY G           C  C +C LR   + E   K
Sbjct: 184 IQLGNQLG------VPWELTWSCYAGSD-------VACGVCDSCRLRLAAFAELGLK 227


>gi|118574287|sp|Q5ZRJ5|QUEC_LEGPH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
          Length = 228

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 70/240 (29%), Positives = 108/240 (45%), Gaps = 27/240 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+TCL+ A  +      LSF YGQR+  EL     + K +     K  
Sbjct: 2   KKAVVLLSGGLDSTTCLALAKSQGFACYALSFSYGQRHSAELCAATRIAKHMGAADHKIV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L +A+ G  + +  +  V    +   +P T+VP RN IFL  A   A  +G 
Sbjct: 62  -------TLDIALFGGSALTDASIEVPEFKESPEIPVTYVPARNTIFLAMALGYAESIGA 114

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKL 183
            +I IG    DYS YPDCR + I + ++  NL  +        T++ PL +L K +T +L
Sbjct: 115 RDIFIGASSVDYSHYPDCRPEFIESFQSLANLATKAGIEGDRFTINAPLQYLSKVQTIQL 174

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQ 239
             ++G      +    + +CY          G  C  C +C  R++G+         +YQ
Sbjct: 175 GTELG------VDYGLTVSCYQANEA-----GEACGQCDSCTFRKRGFKSAGVDDPTRYQ 223


>gi|54295711|ref|YP_128126.1| hypothetical protein lpl2799 [Legionella pneumophila str. Lens]
 gi|81367596|sp|Q5WSS7|QUEC_LEGPL RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|53755543|emb|CAH17042.1| hypothetical protein lpl2799 [Legionella pneumophila str. Lens]
          Length = 228

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 70/240 (29%), Positives = 108/240 (45%), Gaps = 27/240 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+TCL+ A  +      LSF YGQR+  EL     + K +     K  
Sbjct: 2   KKAVVLLSGGLDSTTCLALAKSQGFACYALSFSYGQRHSAELCAATRIAKHMGAADHKIV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L +A+ G  + +  +  V    +   +P T+VP RN IFL  A   A  +G 
Sbjct: 62  -------TLDIALFGGSALTDASIEVPEFKESPEIPVTYVPARNTIFLAMALGYAESIGA 114

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKL 183
            +I IG    DYS YPDCR + I + ++  NL  +        T++ PL +L K +T +L
Sbjct: 115 RDIFIGASSVDYSHYPDCRPEFIESFQSLANLATKAGIEGDRFTINAPLQYLSKVQTIQL 174

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQ 239
             ++G      +    + +CY          G  C  C +C  R++G+         +YQ
Sbjct: 175 GAELG------VDYGLTVSCYQANEA-----GEACGQCDSCTFRKRGFKSAGVDDPTRYQ 223


>gi|116619444|ref|YP_821600.1| exsB protein [Candidatus Solibacter usitatus Ellin6076]
 gi|116222606|gb|ABJ81315.1| exsB protein [Candidatus Solibacter usitatus Ellin6076]
          Length = 223

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 81/238 (34%), Positives = 112/238 (47%), Gaps = 27/238 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           P+A+ L SGG DS+TCL+ A         LSFDYGQR+KVEL+    V + +        
Sbjct: 2   PNAVCLLSGGLDSATCLALARREGYSCYALSFDYGQRHKVELDAAARVAQALGAERHLVV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDN---NLPNTFVPGRNIIFLVFAATLAYR 125
                   + L + G  + ++       +        +P T+VP RN IFL FA   A  
Sbjct: 62  K-------IGLDVFGGSALTAAIDVPKGRSTGEMGAGIPITYVPARNTIFLSFALAWAEV 114

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME------SHVTVHTPLMWLKKYE 179
           LG ++I IGV   DYSGYPDCR + I A E   NL         + + +HTPL+ L K  
Sbjct: 115 LGSSDIFIGVNALDYSGYPDCRPEYIEAYERLANLATRAGVEGTTRMKIHTPLLHLSKAG 174

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
             KL +++G      L    + +CY          G  C  C AC LR+KG+ E   +
Sbjct: 175 IVKLGRELG------LDFGLTFSCYDPG-----PGGLACGQCDACLLRRKGFDEAGIE 221


>gi|153808596|ref|ZP_01961264.1| hypothetical protein BACCAC_02894 [Bacteroides caccae ATCC 43185]
 gi|149128918|gb|EDM20135.1| hypothetical protein BACCAC_02894 [Bacteroides caccae ATCC 43185]
          Length = 221

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 93/234 (39%), Positives = 139/234 (59%), Gaps = 23/234 (9%)

Query: 5   IKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +     SAL++FSGGQDS+TCL WA   F +V  LSF YGQ+++ E+E    + +K    
Sbjct: 1   MNMNKESALVVFSGGQDSTTCLFWAKRNFKKVYALSFLYGQKHEKEVELAREIARKAE-- 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAA 120
                    E  ++ ++ +G + H+SLT    +  Q+   ++ PNTFVPGRN+ FL  AA
Sbjct: 59  --------VEFDVMDVSFIGSLGHNSLTDTSMVMDQEKPADSFPNTFVPGRNLFFLSIAA 110

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
             A   GI +++ GV +TD+SGYPDCR   I+++   +NL M+    +HTPLMW+ K ET
Sbjct: 111 VYARERGINHLITGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVIHTPLMWIDKAET 170

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           W LA ++G   ++++I  E+ TCY G        G GC  CPAC LR++G  ++
Sbjct: 171 WALADELG---VLDVIRHETLTCYNGIP------GDGCGHCPACTLRREGLEKY 215


>gi|312884428|ref|ZP_07744132.1| queuosine biosynthesis protein QueC [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367740|gb|EFP95288.1| queuosine biosynthesis protein QueC [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 231

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 94/226 (41%), Positives = 141/226 (62%), Gaps = 15/226 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  A+ ++D V T++FDYGQR+++E+E    +  ++     K  
Sbjct: 2   KKAVVVFSGGQDSTTCLMQAIKQYDEVHTITFDYGQRHRLEIEVARSIADELGVKAHKVM 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D      +  L  L   S +     V+  +Q+N LPN+FVPGRNI+FL  A   AY++G 
Sbjct: 62  D------VTLLNDLAASSLTRDNIAVSNDVQENGLPNSFVPGRNILFLTLAGIYAYQVGA 115

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
            +++ GVCETD+SGYPDCR+D ++A+  A+  GM+  + + TPLMWL K ETW LA  +G
Sbjct: 116 HDLITGVCETDFSGYPDCRNDFVQAMGKALEQGMDRQLNIITPLMWLNKAETWALADSLG 175

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
               ++LI +++ TCY G        G GC  CP+C+LR KG  ++
Sbjct: 176 A---LDLIKDKTLTCYNGI------IGEGCGDCPSCHLRTKGLDDY 212


>gi|237807722|ref|YP_002892162.1| exsB protein [Tolumonas auensis DSM 9187]
 gi|237499983|gb|ACQ92576.1| exsB protein [Tolumonas auensis DSM 9187]
          Length = 232

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 98/236 (41%), Positives = 147/236 (62%), Gaps = 21/236 (8%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +    A+++FSGGQDS+TCL +A+ ++D V  ++FDYGQR+  E+E    +   +   
Sbjct: 1   MSQTKRKAVVVFSGGQDSTTCLLYAVQQYDEVHAITFDYGQRHVQEIEVARQIAADLG-- 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                  L    +L + +L +++ S+LT++   V+  +Q+N LPNTFVPGRNI+FL  AA
Sbjct: 59  -------LAAHKVLDVGLLNELAVSALTRDAIPVSNDLQENGLPNTFVPGRNILFLTLAA 111

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
             AY++G   ++ GVCETD+SGYPDCR + ++A+  A+ LGME  V   TPLMWL K ET
Sbjct: 112 IYAYQVGADTVITGVCETDFSGYPDCRDEFVKALNHAVKLGMERDVKFETPLMWLNKAET 171

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           W LA  IG    ++ + +++ TCY G        G GC  CPAC LR KG  ++++
Sbjct: 172 WALADKIG---RLDYVRQQTLTCYNG------VIGDGCGECPACKLRAKGLHDYQQ 218


>gi|254000096|ref|YP_003052159.1| exsB protein [Methylovorus sp. SIP3-4]
 gi|253986775|gb|ACT51632.1| exsB protein [Methylovorus sp. SIP3-4]
          Length = 225

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 69/242 (28%), Positives = 104/242 (42%), Gaps = 28/242 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +  A++L SGG DS+T L+ A  +      LS DY QR+  EL     V + +     K
Sbjct: 1   MSKKAVVLLSGGLDSATVLAIARSQGYECYCLSLDYHQRHSAELLAAQRVAECLGAAEHK 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     L L++ G  + +    +V     +      +VP RN I L  A   A  L
Sbjct: 61  TVQ-------LDLSLFGGSALTDNRIDVPQSPTEGIPVT-YVPARNTIMLSLALAWAEVL 112

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETW 181
              +I IGV   DYSGYPDCR + +RA ++  NL  +       +TVH PL+ L K +  
Sbjct: 113 KSRDIFIGVNALDYSGYPDCRAEYVRAFQSMANLATKAAVEGDTITVHAPLIDLSKADIV 172

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EK 237
           K    +G           + +CY    +     G  C  C +C  R++G++        +
Sbjct: 173 KRGSALG------FDYGMTVSCYQADEE-----GRACGKCDSCRFRREGFLAAGLADPTR 221

Query: 238 YQ 239
           YQ
Sbjct: 222 YQ 223


>gi|157692044|ref|YP_001486506.1| transcriptional regulator [Bacillus pumilus SAFR-032]
 gi|189038896|sp|A8FCH9|QUEC_BACP2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|157680802|gb|ABV61946.1| possible transcriptional regulator [Bacillus pumilus SAFR-032]
          Length = 218

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 94/229 (41%), Positives = 149/229 (65%), Gaps = 20/229 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WAL +F+ VET++F Y QR++ E++    +  K+      
Sbjct: 2   KNEKAVVVFSGGQDSTTCLLWALQQFEEVETVTFHYNQRHQEEIDVAKRIADKLG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 ++H+L +++L  ++ ++LT  ++ ++ ++  LP+TFVPGRN++FL FA+ LAY+
Sbjct: 57  -----VKNHLLDMSLLNQLAPNALTRDDIDIEEKEGELPSTFVPGRNLVFLSFASILAYQ 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G  +I+ GVCETD+SGYPDCR + +++    +NL ME    +HTPLMWL K ETWKLA 
Sbjct: 112 IGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIHTPLMWLNKAETWKLAD 171

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           ++   + ++ +  E+ TCY G          GC  CPAC LR+KG+  +
Sbjct: 172 EL---NALDFVKNETLTCYNGI------ISDGCGECPACKLRKKGYDTY 211


>gi|223043070|ref|ZP_03613118.1| ExsB protein [Staphylococcus capitis SK14]
 gi|222443924|gb|EEE50021.1| ExsB protein [Staphylococcus capitis SK14]
          Length = 223

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 90/237 (37%), Positives = 141/237 (59%), Gaps = 20/237 (8%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M         A+++FSGGQDS+TCL +A   F  VE ++F+YGQR+  E+E    +    
Sbjct: 1   MTKSTLDKDKAIVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDTEIEVAKKIA--- 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                   +   + HIL +++L  ++ ++LT  ++ ++  D+ +PNTFVP RN++FL FA
Sbjct: 58  -------NEQNLKHHILDMSLLSQLTPNALTQHDLEIEENDDGIPNTFVPARNLLFLSFA 110

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
             LAY+L   +I+ GVCETD+SGYPDCR   I+++   ++L M+    +HTPLMWL K +
Sbjct: 111 GALAYQLNAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLSMDKDFVIHTPLMWLDKAQ 170

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           TW+L+ ++G   +++ +   + TCY G        G GC  CPAC LR +G   + E
Sbjct: 171 TWELSDELG---VLDYVRHNTLTCYNG------VIGDGCGECPACKLRARGLHHYLE 218


>gi|39995591|ref|NP_951542.1| exsB protein [Geobacter sulfurreducens PCA]
 gi|81703348|sp|Q74FW9|QUEC_GEOSL RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|39982354|gb|AAR33815.1| exsB protein [Geobacter sulfurreducens PCA]
          Length = 237

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 80/237 (33%), Positives = 112/237 (47%), Gaps = 29/237 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L+SGG DS+TCL+ A         +SF YGQR+ VELE      +    +   
Sbjct: 1   MTRKAVVLYSGGLDSTTCLAIARAEGFEPHAMSFSYGQRHSVELELAKRNARPAGAV--- 57

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ--DNNLPNTFVPGRNIIFLVFAATLAY 124
                  +H++    L  +  S+LT ++A+  +   +++P T+VP RN IFL FA   A 
Sbjct: 58  -------EHMVVEFDLRKVGGSALTADIAVPKEGVGDDIPVTYVPARNTIFLSFALGWAE 110

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES------HVTVHTPLMWLKKY 178
            LG  +I IGV   DYSGYPDCR + I A ET  NL             +H PLM L K 
Sbjct: 111 VLGAFDIFIGVNALDYSGYPDCRPEYISAFETMANLATRVGVEGTGRFRIHAPLMRLTKA 170

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           E  +    +G      +    +H+CY          G  C  C +C LR KG+ E  
Sbjct: 171 EIIRKGLALG------VDYGLTHSCYDP-----SPAGVACGLCDSCRLRLKGFAEVG 216


>gi|53804444|ref|YP_113697.1| exsB protein [Methylococcus capsulatus str. Bath]
 gi|81682290|sp|Q609K0|QUEC_METCA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|53758205|gb|AAU92496.1| exsB protein [Methylococcus capsulatus str. Bath]
          Length = 223

 Score =  172 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 74/240 (30%), Positives = 111/240 (46%), Gaps = 28/240 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+T L+ A         +SFDYGQR+  EL+    + + +  +  K  
Sbjct: 2   KPAVVLLSGGLDSATTLAIARREGFACHAMSFDYGQRHGAELKAARRLAQSLGAIEHKTV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   + L  +G  + + L   V      N +P T+VP RN +FL FA   A  LG 
Sbjct: 62  H-------IGLDAIGGSALTDLRIAVPD-HPQNGIPVTYVPARNTVFLSFALGWAEVLGA 113

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKKYETWKL 183
            +I IGV   DYSGYPDCR + IRA E   NL  +         +HTPL+ L K +  + 
Sbjct: 114 LDIFIGVNAVDYSGYPDCRPEFIRAFEQLANLATKVGVEGGRFRIHTPLIDLSKADIIRT 173

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQ 239
              +G      +    + +CY    +     G  C  C +C LR++G+ +       +Y+
Sbjct: 174 GTALG------IDYAMTVSCYAADAE-----GLACGVCDSCRLRRQGFEQAGIADPTRYR 222


>gi|330684948|gb|EGG96627.1| queuosine biosynthesis protein QueC [Staphylococcus epidermidis
           VCU121]
          Length = 223

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 92/231 (39%), Positives = 142/231 (61%), Gaps = 20/231 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+++FSGGQDS+TCL +A   F  V  ++F+YGQR+  E+E    + +         
Sbjct: 8   QNKAIVVFSGGQDSTTCLFYAKKHFKDVILITFNYGQRHDAEIEVAKKIAQ--------- 58

Query: 68  KDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +   E HIL +++L  ++ ++LT  ++ ++  ++ +PNTFVP RN++FL FA  LAY++
Sbjct: 59  -EQNVEHHILDMSLLSQLTPNALTQHDLKIEDTEDGIPNTFVPARNLLFLSFAGALAYQI 117

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
              +I+ GVCETD+SGYPDCR   I+++   +NL M+    +HTPLMWL K +TW+LA +
Sbjct: 118 KAKHIITGVCETDFSGYPDCRDSFIKSMNVTLNLSMDRDFVIHTPLMWLDKAQTWELADN 177

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +G   ++N I E + TCY G        G GC  CPAC LR +G  ++  K
Sbjct: 178 LG---VLNYIRENTLTCYNGI------IGDGCGECPACQLRSRGLDQYLAK 219


>gi|292490345|ref|YP_003525784.1| exsB protein [Nitrosococcus halophilus Nc4]
 gi|291578940|gb|ADE13397.1| exsB protein [Nitrosococcus halophilus Nc4]
          Length = 224

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 70/241 (29%), Positives = 107/241 (44%), Gaps = 28/241 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +P A++L SGG DS+T L+ A ++     T+SFDYGQR++VEL+    + + +  +  K 
Sbjct: 3   SPKAVVLVSGGLDSATVLAIAREQEFACYTMSFDYGQRHRVELQAAAEISRLLGAVEHKL 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    + L  +G  + +  +  V     +      +VP RN +FL FA   A  LG
Sbjct: 63  -------ITIDLGGMGGSALTDSSIAVPEAPTEAIPVT-YVPARNTVFLAFALGWAEVLG 114

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWK 182
             +I IGV   DYSGYPDCR   + A E   NL            +  PL+ L K E  +
Sbjct: 115 AQDIFIGVNAVDYSGYPDCRPAFVEAFEHLANLATRAGLEGQRFRIQAPLIHLSKAEIIR 174

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKY 238
               +G      +    + +CY          G  C  C +C  R++G+ E       +Y
Sbjct: 175 EGIRLG------IDYSRTVSCYQADET-----GRACGVCDSCRFRKQGFQEAGVPDPTRY 223

Query: 239 Q 239
            
Sbjct: 224 H 224


>gi|82703823|ref|YP_413389.1| ExsB [Nitrosospira multiformis ATCC 25196]
 gi|110816235|sp|Q2Y5H4|QUEC_NITMU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|82411888|gb|ABB75997.1| preQ(0) biosynthesis protein QueC [Nitrosospira multiformis ATCC
           25196]
          Length = 232

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 69/230 (30%), Positives = 100/230 (43%), Gaps = 23/230 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DS+T L+ A  +      LS  YGQR+  EL     + + +     K   
Sbjct: 3   KAVVLLSGGLDSATVLAIARQQGYECYALSVSYGQRHGAELAAAKNLARSLGATAHKIIQ 62

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                  + L+  G  +     + +        +P+T+VP RN I L  A   A  LG  
Sbjct: 63  -------VDLSTFGGSALIDKEREIPTDGVTPGIPSTYVPARNTIMLSIALAWAEVLGSG 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKLA 184
           +I IGV   DYSGYPDCR + I A ET  N+  ++ +      +H PLM L K E  K  
Sbjct: 116 DIFIGVNAIDYSGYPDCRPEYIEAFETMANVATKAGIEGTRLAIHAPLMNLSKAEIIKRG 175

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
             +G      +    + +CY          G  C  C +C LR+ G+   
Sbjct: 176 GVLG------VDYSMTVSCYQADDA-----GLACGVCDSCRLRRAGFESA 214


>gi|307611759|emb|CBX01467.1| hypothetical protein LPW_31551 [Legionella pneumophila 130b]
          Length = 228

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 70/240 (29%), Positives = 108/240 (45%), Gaps = 27/240 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+TCL+ A  +      LSF YGQR+  EL     + K +     K  
Sbjct: 2   KKAVVLLSGGLDSTTCLALAKSQGFACYALSFSYGQRHSAELCAATRIAKHMGASDHKIV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L +A+ G  + +  +  V    +   +P T+VP RN IFL  A   A  +G 
Sbjct: 62  -------TLDIALFGGSALTDASIEVPEFKESPEIPVTYVPARNTIFLAMALGYAESIGA 114

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKL 183
            +I IG    DYS YPDCR + I + ++  NL  +        T++ PL +L K +T +L
Sbjct: 115 RDIFIGASSVDYSHYPDCRPEFIESFQSLANLATKAGIEGDRFTINAPLQYLSKVQTIQL 174

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQ 239
             ++G      +    + +CY          G  C  C +C  R++G+         +YQ
Sbjct: 175 GTELG------VDYGLTVSCYQANEA-----GEACGQCDSCTFRKRGFKSAGVDDPTRYQ 223


>gi|168702722|ref|ZP_02734999.1| exsB protein [Gemmata obscuriglobus UQM 2246]
          Length = 230

 Score =  172 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 73/235 (31%), Positives = 110/235 (46%), Gaps = 27/235 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DS+T L+ A  +      LS DYGQR++VELE    V K +  +  +   
Sbjct: 3   KAVVLLSGGLDSTTALAVARGQGFECYALSVDYGQRHRVELERAAVVAKALGVIEHRTVK 62

Query: 70  SLGEDHILPLAILGDISHS---SLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                  L L  +G  + +   ++ K+ +     + +P T+VP RN I L  A   A  +
Sbjct: 63  -------LDLREIGGSALTSDLAVPKDRSDGEMGHGVPVTYVPARNTILLGVALGFAEVV 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES------HVTVHTPLMWLKKYET 180
           G  +I IG    DYSGYPDCR + + A E   NL  ++         VH+PL+ L K E 
Sbjct: 116 GAFDIFIGANVLDYSGYPDCRPEFLSAFEALANLATKAGTEGAGRFRVHSPLLKLTKAEI 175

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            +    +G      +   ++ +CY          G  C  C +C LR+KG+ E  
Sbjct: 176 IREGVKLG------VDYAQTLSCYDPD-----AAGRACGRCDSCLLRKKGFAEAG 219


>gi|322421610|ref|YP_004200833.1| exsB protein [Geobacter sp. M18]
 gi|320127997|gb|ADW15557.1| exsB protein [Geobacter sp. M18]
          Length = 229

 Score =  172 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 24/234 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L+SGG DS+TCL+ A  +      LSF YGQR++ EL       + +  +   
Sbjct: 1   MKKKAVILYSGGLDSTTCLAIARHQGFEPYALSFSYGQRHQHELAVAKLNARPMGAVDHL 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D         L  +G  + +S  +     + ++     +VP RN IFL FA   A  L
Sbjct: 61  LVD-------FDLRKMGGSALTSDIEVPKAGVGEDIPVT-YVPARNTIFLSFALGWAETL 112

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETW 181
           G  +I IGV   DYSGYPDCR + I A E   NL  +       +T+HTPL+ L K E  
Sbjct: 113 GCFDIFIGVNALDYSGYPDCRPEFIAAYEAMANLATKAGVEGKRMTIHTPLISLSKAEII 172

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           K    +G      +   ++H+CY    D     G  C  C +C LR KG+ E  
Sbjct: 173 KTGLTLG------VDYGKTHSCYDPSED-----GAACGLCDSCRLRLKGFAELG 215


>gi|284028808|ref|YP_003378739.1| exsB protein [Kribbella flavida DSM 17836]
 gi|283808101|gb|ADB29940.1| exsB protein [Kribbella flavida DSM 17836]
          Length = 235

 Score =  172 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 79/245 (32%), Positives = 111/245 (45%), Gaps = 26/245 (10%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M    K    A++L SGG DS+T L+ A         LSF YGQR+ VEL     V +  
Sbjct: 1   MEVEEKMDRPAVVLLSGGLDSTTVLAIARSEGFTPYALSFRYGQRHVVELAAATRVAEAQ 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNV---AMKIQDNNLPNTFVPGRNIIFLV 117
                   D       + L + G  + +S         +   D ++P T+VP RN IFL 
Sbjct: 61  GVARHVIAD-------IDLRVFGGSALTSDIDVPKHDDVSDVDESIPLTYVPARNTIFLS 113

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPL 172
           FA   A  +G  ++ IGV   DYSGYPDCR + I A E   NL   + V      +HTPL
Sbjct: 114 FALAYAETVGAIDVFIGVSALDYSGYPDCRPEYIEAYEAMANLATRAGVDGHRLKIHTPL 173

Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
           + + K +T +L   +G      +    + +CY    D     G  C  C +C LR+KG+ 
Sbjct: 174 IEMTKGQTVELGLKLG------VDYALTSSCYDPDLD-----GRPCGHCDSCLLRRKGFA 222

Query: 233 EFKEK 237
           E   +
Sbjct: 223 EAGSE 227


>gi|52079921|ref|YP_078712.1| queuosine (Q) synthesis protein QueC [Bacillus licheniformis ATCC
           14580]
 gi|52785292|ref|YP_091121.1| YkvJ [Bacillus licheniformis ATCC 14580]
 gi|319646262|ref|ZP_08000492.1| queuosine biosynthesis protein queC [Bacillus sp. BT1B_CT2]
 gi|81385781|sp|Q65KI6|QUEC_BACLD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|52003132|gb|AAU23074.1| Queuosine (Q) synthesis protein QueC [Bacillus licheniformis ATCC
           14580]
 gi|52347794|gb|AAU40428.1| YkvJ [Bacillus licheniformis ATCC 14580]
 gi|317392012|gb|EFV72809.1| queuosine biosynthesis protein queC [Bacillus sp. BT1B_CT2]
          Length = 219

 Score =  172 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 95/229 (41%), Positives = 144/229 (62%), Gaps = 20/229 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WAL +F  VE ++F Y QR+K E+E    +  K+      
Sbjct: 2   KQEKAIVVFSGGQDSTTCLLWALRQFQEVEAVTFQYNQRHKQEIEVAKKIAAKLG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 + H+L + +L  ++ ++LT  ++ ++ ++  LP+TFVPGRN++FL FA+ LAY+
Sbjct: 57  -----VKHHLLDMELLNQLAPNALTRDDIEIEAKEGELPSTFVPGRNLVFLSFASILAYQ 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G  +I+ GVCETD+SGYPDCR + +++    +NL ME    +HTPLMWL K ETW+LA 
Sbjct: 112 VGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMERPFVIHTPLMWLNKAETWELAD 171

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           ++   D ++ +  E+ TCY G          GC  CPAC LR  G+ E+
Sbjct: 172 EL---DALDFVKNETLTCYNGI------IADGCGECPACKLRANGYNEY 211


>gi|70727185|ref|YP_254101.1| hypothetical protein SH2186 [Staphylococcus haemolyticus JCSC1435]
 gi|110816266|sp|Q4L4D0|QUEC_STAHJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|68447911|dbj|BAE05495.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 223

 Score =  172 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 91/237 (38%), Positives = 143/237 (60%), Gaps = 20/237 (8%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M +       A+++FSGGQDS+TCL +A   F  VE ++F+YGQR+  E+E    + K  
Sbjct: 1   MTNQNLNKDKAIVVFSGGQDSTTCLFYAKKHFKDVELVTFNYGQRHDAEIEVATRIAK-- 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                   +   + HIL +++L  ++ ++LT  ++ ++  ++ +PNTFVP RN++FL FA
Sbjct: 59  --------EQNLKHHILDMSLLSQLTPNALTQHDMDIETGEDGIPNTFVPARNLLFLSFA 110

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
             LAY+    +I+ GVCETD+SGYPDCR   I+++   ++L M+    +HTPLMWL K +
Sbjct: 111 GALAYQRNAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLSMDKDFVIHTPLMWLDKAQ 170

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           TW+L+ ++G   +++ I   + TCY G        G GC  CPAC LRQ+G   + E
Sbjct: 171 TWELSDELG---VLDYIRHNTLTCYNG------VIGDGCGECPACQLRQRGLQHYLE 218


>gi|307823681|ref|ZP_07653909.1| exsB protein [Methylobacter tundripaludum SV96]
 gi|307734975|gb|EFO05824.1| exsB protein [Methylobacter tundripaludum SV96]
          Length = 225

 Score =  172 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 82/244 (33%), Positives = 112/244 (45%), Gaps = 32/244 (13%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS T L+ A  +  +   LSFDYGQR+  EL     +          
Sbjct: 1   MQKKAIVLLSGGLDSITVLALAKKQGFKCYALSFDYGQRHNAELVAAAQIA--------- 51

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             D   EDH +    L  I  S+LT           + +P T+VP RN IFL FA   A 
Sbjct: 52  -ADYQVEDHKIIKLGLSSIGGSALTDEHIAVPHSPQDGIPVTYVPARNTIFLSFALGWAE 110

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYE 179
            L +++I IGV   DYSGYPDCR + I+A +   NL  +      H  +HTPL+ L K E
Sbjct: 111 VLKLSDIFIGVNAVDYSGYPDCRPEFIKAFQQLANLATKAGVEGEHFVIHTPLIALSKAE 170

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK---- 235
             K   ++G      +  + + +CY          G  C  C AC LR+ G+ E      
Sbjct: 171 IIKQGVELG------VDYQRTVSCYSADE-----QGRACQVCDACRLRKIGFTEAGIKDP 219

Query: 236 EKYQ 239
            +YQ
Sbjct: 220 TRYQ 223


>gi|77460619|ref|YP_350126.1| ExsB [Pseudomonas fluorescens Pf0-1]
 gi|110816245|sp|Q3K7W9|QUEC_PSEPF RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|77384622|gb|ABA76135.1| preQ(0) biosynthesis protein QueC [Pseudomonas fluorescens Pf0-1]
          Length = 230

 Score =  172 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 69/242 (28%), Positives = 108/242 (44%), Gaps = 25/242 (10%)

Query: 1   MNDIIKKA-PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           M + +  +   A++L SGG DS+T ++ A        T+SFDYGQR+  EL     V + 
Sbjct: 1   MTEQLNTSQKRAVILLSGGLDSATVVAMARAEGYACYTMSFDYGQRSHAELHAAARVARD 60

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +  +  K          L L  +G  + +  + ++  ++    +P T+VP RN +FL  A
Sbjct: 61  LGVVEHKVIG-------LNLNGMGGSALTDTSIDIPEEL-GEGIPVTYVPARNTVFLSLA 112

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMW 174
              A  LG  +I IGV   DYSGYPDCR + I + E   NL  +     +   +  PL  
Sbjct: 113 LGWAEVLGARDIFIGVNAVDYSGYPDCRPEFIESFERMANLATKAGVEGNGFRIQAPLQN 172

Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           L K +  +    +G      +    + +CY    D     G  C  C +C LR +G+   
Sbjct: 173 LSKAQIVQAGVKLG------VDYGLTVSCYQADDD-----GRACGKCDSCRLRAEGFAAA 221

Query: 235 KE 236
             
Sbjct: 222 GI 223


>gi|145554190|gb|ABP68893.1| unknown [Bacillus sp. PL-12]
          Length = 218

 Score =  172 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 92/232 (39%), Positives = 140/232 (60%), Gaps = 21/232 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WA+  F  VE ++FDY QR + E++C   +   +      
Sbjct: 2   KNEKAVVVFSGGQDSTTCLFWAMKEFKEVEAVTFDYNQRXRTEIQCAKDIASGLG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKI--QDNNLPNTFVPGRNIIFLVFAATLAY 124
                 + H+L +++L  ++ ++LT++       ++  LP+TFVPGRN++FL FA  LA 
Sbjct: 57  -----VKHHVLDMSLLNQLAPNALTRSDIEVKDGEEGELPSTFVPGRNLLFLSFAGVLAS 111

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++   +IV GVCETD+SGYPDCR   I+++   +NL ++ +  +HTPLMWL K +TWKLA
Sbjct: 112 QVNAKHIVTGVCETDFSGYPDCRDVFIKSLNVTLNLSIDQNFVIHTPLMWLNKAQTWKLA 171

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            ++   + V    + + TCY G          GC  CPAC LR+KG  E+ E
Sbjct: 172 DELDAFEFVR---KRTLTCYNGI------IADGCGICPACKLRKKGLDEYLE 214


>gi|315645651|ref|ZP_07898775.1| exsB protein [Paenibacillus vortex V453]
 gi|315279129|gb|EFU42439.1| exsB protein [Paenibacillus vortex V453]
          Length = 225

 Score =  172 bits (434), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 93/230 (40%), Positives = 141/230 (61%), Gaps = 19/230 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K   A+++FSGGQDS+TCL W  +RF  VET++FDYGQR+K+E+EC   + K+     
Sbjct: 1   MLKNEKAVVVFSGGQDSTTCLFWTKERFAEVETVTFDYGQRHKLEIECAAQIAKEQG--- 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                   +  +L +++L  ++ ++LT++     + + LP TFV GRN++FL FAA LA 
Sbjct: 58  -------VKQTVLDMSLLNQLAPNALTRSDIEIAEGDGLPTTFVDGRNLLFLSFAAVLAK 110

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G  +++ GVCETD+SGYPDCR   I+++   +NL M+    +HTPLMWL K ETW+LA
Sbjct: 111 GAGAKHLITGVCETDFSGYPDCRDSFIKSLNVTLNLAMDYPFVIHTPLMWLDKSETWELA 170

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
             +   + +  + + + TCY G +      G GC  CPAC LR+ G   +
Sbjct: 171 DQM---NALEYVRDHTLTCYNGIK------GDGCGECPACKLRKAGLDNY 211


>gi|242372945|ref|ZP_04818519.1| ExsB family post-transcriptional regulator [Staphylococcus
           epidermidis M23864:W1]
 gi|242349429|gb|EES41030.1| ExsB family post-transcriptional regulator [Staphylococcus
           epidermidis M23864:W1]
          Length = 223

 Score =  172 bits (434), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 88/235 (37%), Positives = 140/235 (59%), Gaps = 20/235 (8%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M +       A+++FSGGQDS+TCL +A   F  VE ++F+YGQR+  E+E    +    
Sbjct: 1   MTESDLNKDKAIVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDTEIEVAKKIA--- 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                   +   + HIL +++L  ++ ++LT  ++ ++  ++ +PNTFVP RN++FL FA
Sbjct: 58  -------NEQGLKHHILDMSLLSQLTPNALTQHDLDIEENEDGIPNTFVPARNLLFLSFA 110

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
             LAY++   +I+ GVCETD+SGYPDCR   I+++   ++L M     +HTPLMWL K +
Sbjct: 111 GALAYQINAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLSMGKDFVIHTPLMWLDKAQ 170

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           TW+L+ ++G   +++ I   + TCY G        G GC  CPAC LR +G   +
Sbjct: 171 TWELSDELG---VLDYIRYNTLTCYNGI------IGDGCGECPACKLRARGLHHY 216


>gi|192361867|ref|YP_001983292.1| exsB protein [Cellvibrio japonicus Ueda107]
 gi|254764318|sp|B3PC22|QUEC_CELJU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|190688032|gb|ACE85710.1| exsB protein [Cellvibrio japonicus Ueda107]
          Length = 225

 Score =  172 bits (434), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 74/240 (30%), Positives = 112/240 (46%), Gaps = 28/240 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A++L SGG DS+T ++ A  +     T+SFDYGQR++ EL+      K    L  K 
Sbjct: 3   RKKAVILVSGGLDSTTVIAIARSQGYDCYTISFDYGQRHRAELKAAEITAKAHGSLEHKV 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    L L  +G  + +  + +V  + + + +P T+VP RN +FL  A   A  LG
Sbjct: 63  -------IRLDLGAIGGSALTDTSIDVPEE-ETSGIPVTYVPARNTVFLSIALGWAEVLG 114

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWK 182
             +I IGV   DYSGYPDCR D I A ET  NL  +  +      + TPL+ L K +  +
Sbjct: 115 ALDIFIGVNAVDYSGYPDCRPDYIAAYETMANLATKRGIEGERLHIRTPLINLTKAQIIQ 174

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKY 238
               +G      +    + +CY          G  C  C +C LR++G+ +       +Y
Sbjct: 175 QGLALG------VDYRLTVSCYQANDG-----GEACGKCDSCRLRKQGFEQAGVADPTRY 223


>gi|257075836|ref|ZP_05570197.1| hypothetical protein Faci_02164 [Ferroplasma acidarmanus fer1]
          Length = 239

 Score =  172 bits (434), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 70/233 (30%), Positives = 108/233 (46%), Gaps = 27/233 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A++L SGG DS T L++ALD   +V  +SFDYGQR+  EL+    +       + K 
Sbjct: 3   NDKAVILISGGLDSPTVLAYALDNGYKVYPVSFDYGQRHIRELQSSEDICNYYGVKLKKI 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQ--DNNLPNTFVPGRNIIFLVFAATLAYR 125
           K        + +  +G  + +         ++  +  +P T+VP RN IF+  AA     
Sbjct: 63  K--------IDMTQIGGSALTDKIDVPERGLENIEKEIPVTYVPARNTIFISLAAAYGET 114

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN----LGMESHVTVHTPLMWLKKYETW 181
           +   +I IG    DYSGYPDCR +    +E  +N    LG+     +  PL +L K +  
Sbjct: 115 IKANSIFIGANAIDYSGYPDCRPEFFNTMEKTLNLGTELGITDGFRIMVPLQYLTKSDIV 174

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           KL + +G      +    + +CY G+          C  C +C LR KG+ME 
Sbjct: 175 KLGRRLG------VPYRLTWSCYNGRDK-------ACGKCDSCLLRLKGFMEA 214


>gi|304312905|ref|YP_003812503.1| ExsB protein [gamma proteobacterium HdN1]
 gi|301798638|emb|CBL46870.1| ExsB protein [gamma proteobacterium HdN1]
          Length = 233

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 76/242 (31%), Positives = 114/242 (47%), Gaps = 29/242 (11%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +    +A++L SGG DS+TCL+ A  +   V  LSF YGQR+ VELE    V   +    
Sbjct: 1   MSNHRAAIVLLSGGLDSATCLALARQQGFDVYALSFSYGQRHSVELEASRRVAHALGATA 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAM------KIQDNNLPNTFVPGRNIIFLVF 118
            +  +       + LA  G  + + L+ +V +            +P T+VP RN IFL +
Sbjct: 61  HRIAN-------IDLAAFGGSALTDLSIDVPVAAPNAPVDHSEEIPITYVPARNTIFLSY 113

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLM 173
           A   A  L   +I IGV   DYSGYPDCR + I A ET  NL     V      +H PLM
Sbjct: 114 ALAWAEVLESDDIFIGVNAVDYSGYPDCRLEFINAFETMANLATRRAVEGAKLHIHAPLM 173

Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
            + K +  ++   +G      +    + +CY          G  C +C +C LR++G+++
Sbjct: 174 KMSKAQIIEVGVSLG------VDYGATISCYQADD-----QGAACGACDSCRLRREGFLQ 222

Query: 234 FK 235
             
Sbjct: 223 AG 224


>gi|194014818|ref|ZP_03053435.1| ExsB protein [Bacillus pumilus ATCC 7061]
 gi|194013844|gb|EDW23409.1| ExsB protein [Bacillus pumilus ATCC 7061]
          Length = 218

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 94/229 (41%), Positives = 149/229 (65%), Gaps = 20/229 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WAL +F+ VET++F Y QR++ E++    +  K+      
Sbjct: 2   KNEKAVVVFSGGQDSTTCLLWALQQFEEVETVTFHYNQRHQEEIDVAKRIADKLG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 ++H+L +++L  ++ ++LT  ++ ++ ++  LP+TFVPGRN++FL FA+ LAY+
Sbjct: 57  -----VKNHLLDMSLLNQLAPNALTRDDIDIEEKEGELPSTFVPGRNLVFLSFASILAYQ 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G  +I+ GVCETD+SGYPDCR + +++    +NL ME    +HTPLMWL K ETWKLA 
Sbjct: 112 IGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNLAMEKPFVIHTPLMWLNKAETWKLAD 171

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           ++   + ++ +  E+ TCY G          GC  CPAC LR+KG+  +
Sbjct: 172 EL---NALDFVKNETLTCYNGI------MSDGCGECPACKLRKKGYDTY 211


>gi|260778538|ref|ZP_05887430.1| queuosine Biosynthesis QueC ATPase [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260604702|gb|EEX30997.1| queuosine Biosynthesis QueC ATPase [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 231

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 96/226 (42%), Positives = 139/226 (61%), Gaps = 15/226 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  +D V  ++FDYGQR+K+E+E    + K++     K  
Sbjct: 2   KKAVVVFSGGQDSTTCLVQALKNYDEVHAITFDYGQRHKLEIEVAQDLAKELGVKAHKVM 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D      +  L  L   S +     V+ ++Q+N LPN+FVPGRNI+FL  A   AY++G 
Sbjct: 62  D------VGLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIGA 115

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++ GVCETD+SGYPDCR+D ++A+ +A+  GM+ ++ + TPLMWL K ETW LA    
Sbjct: 116 QAVITGVCETDFSGYPDCRNDFVKAMNSALVQGMDRNLDIVTPLMWLNKAETWALADQ-- 173

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
             D + L+ E++ TCY G        G GC  CPAC LR+ G  ++
Sbjct: 174 -YDALQLVREKTLTCYNGI------IGDGCGDCPACDLRKAGLNDY 212


>gi|253572607|ref|ZP_04850008.1| queuosine biosynthesis protein queC [Bacteroides sp. 1_1_6]
 gi|298386365|ref|ZP_06995921.1| ExsB protein [Bacteroides sp. 1_1_14]
 gi|110816211|sp|Q8A7F8|QUEC_BACTN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|251837739|gb|EES65829.1| queuosine biosynthesis protein queC [Bacteroides sp. 1_1_6]
 gi|298260742|gb|EFI03610.1| ExsB protein [Bacteroides sp. 1_1_14]
          Length = 219

 Score =  171 bits (433), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 95/234 (40%), Positives = 140/234 (59%), Gaps = 22/234 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +AL++FSGGQDS+TCL WA   F +V  LSF YGQ+++ E+E    + +K       
Sbjct: 2   NRETALVVFSGGQDSTTCLFWAKRNFKKVYALSFLYGQKHQKEVELAREIARKAE----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN---LPNTFVPGRNIIFLVFAATLA 123
                 E  ++ ++ +G + H+SLT    +  Q+     +PNTFVPGRN+ FL  AA  A
Sbjct: 57  -----VEFDVMDVSFIGTLGHNSLTDTTMVMDQEKPAGSVPNTFVPGRNLFFLSIAAVYA 111

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              GI ++V GV +TD+SGYPDCR   I+++   +NL M+    +HTPLMW+ K ETW L
Sbjct: 112 RERGINHLVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWAL 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           A ++G   +++LI  E+ TCY G +      G GC  CPAC LR++G  ++ +K
Sbjct: 172 ADELG---VLDLIRNETLTCYNGIQ------GDGCGHCPACTLRREGLEKYLKK 216


>gi|297578951|ref|ZP_06940879.1| exsB protein [Vibrio cholerae RC385]
 gi|297536545|gb|EFH75378.1| exsB protein [Vibrio cholerae RC385]
          Length = 231

 Score =  171 bits (433), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 99/229 (43%), Positives = 147/229 (64%), Gaps = 21/229 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  FD V  ++FDYGQR+K+E+E    + K++        
Sbjct: 2   KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQQLAKQLG------- 54

Query: 69  DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +    ++ +++L +++ SSLT++   V+ ++Q N LPN+FVPGRNI+FL  A   AY+
Sbjct: 55  --VTAHKVMDVSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQ 112

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G T ++ GVCETD+SGYPDCRH+ ++A+  A+  GM+  +T+ TPLMWL K ETW LA 
Sbjct: 113 IGATTVITGVCETDFSGYPDCRHEFVQAMNQALAKGMDLPLTIRTPLMWLNKAETWALAD 172

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            +G    ++L+  ++ TCY G        G GC  CPAC LRQ G   +
Sbjct: 173 QLGA---LDLVRHQTLTCYNG------LIGDGCGECPACGLRQAGLKAY 212


>gi|288942464|ref|YP_003444704.1| exsB protein [Allochromatium vinosum DSM 180]
 gi|288897836|gb|ADC63672.1| exsB protein [Allochromatium vinosum DSM 180]
          Length = 232

 Score =  171 bits (433), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 71/236 (30%), Positives = 104/236 (44%), Gaps = 27/236 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+T L+ A         LSF YGQR+ VELE    V + +        
Sbjct: 2   KPAVVLLSGGLDSTTALAIARAEGFVPHALSFRYGQRHAVELEAAARVAESMGVTEHVIA 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNV---AMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +       + L   G  + ++          +  ++++P T+VP RN +FL FA   A  
Sbjct: 62  E-------IDLRRFGGSALTADLAVPKGRDPREMESDIPVTYVPARNTVFLSFALAWAEV 114

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM------ESHVTVHTPLMWLKKYE 179
           L  ++I IGV   DYSGYPDCR + I A E   NL             +H PL+ + K E
Sbjct: 115 LEASDIFIGVNALDYSGYPDCRPEYIAAFEQLANLATAAGVEGRQRYRIHAPLIEMSKAE 174

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
             +    +G      +    + +CY          G  C +C +C LR KG+ E  
Sbjct: 175 IIRTGLALG------VDYGLTSSCYDPG-----SGGRPCGACDSCQLRAKGFAEAG 219


>gi|148361198|ref|YP_001252405.1| ExsB protein [Legionella pneumophila str. Corby]
 gi|296108534|ref|YP_003620235.1| hypothetical protein lpa_04195 [Legionella pneumophila 2300/99
           Alcoy]
 gi|167016432|sp|A5II59|QUEC_LEGPC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|148282971|gb|ABQ57059.1| ExsB protein [Legionella pneumophila str. Corby]
 gi|295650436|gb|ADG26283.1| hypothetical protein lpa_04195 [Legionella pneumophila 2300/99
           Alcoy]
          Length = 228

 Score =  171 bits (433), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 70/240 (29%), Positives = 107/240 (44%), Gaps = 27/240 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+TCL+ A  +      LSF YGQR+  EL     + K +     K  
Sbjct: 2   KKAVVLLSGGLDSTTCLALAKSQGFACYALSFSYGQRHSAELCAATRIAKHMDAADHKIV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L  A+ G  + +  +  V    +   +P T+VP RN IFL  A   A  +G 
Sbjct: 62  -------TLDTALFGGSALTDASIEVPEFKESPEIPVTYVPARNTIFLAMALGYAESIGA 114

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKL 183
            +I IG    DYS YPDCR + I + ++  NL  +        T++ PL +L K +T +L
Sbjct: 115 RDIFIGASSVDYSHYPDCRPEFIESFQSLANLATKAGIEGDRFTINAPLQYLSKVQTIQL 174

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQ 239
             ++G      +    + +CY          G  C  C +C  R++G+         +YQ
Sbjct: 175 GTELG------VDYGLTVSCYQANEA-----GEACGQCDSCTFRKRGFKSAGVNDPTRYQ 223


>gi|254239324|ref|ZP_04932647.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|126171255|gb|EAZ56766.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
          Length = 224

 Score =  171 bits (433), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 65/235 (27%), Positives = 100/235 (42%), Gaps = 24/235 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T ++ A        T+SFDYGQR++ EL+    V +++  +  K
Sbjct: 2   NQKKAVILLSGGLDSATVVAMAKADGYACYTMSFDYGQRHRAELQAAERVARQLGVIEHK 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     L L  +G  + +  +  V     +      +VP RN +FL  A   A  L
Sbjct: 62  VIG-------LDLNGMGGSALTDESIAVPESPSEGIPVT-YVPARNTVFLSLALGWAEVL 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETW 181
              +I IGV   DYSGYPDCR + + A E   NL  +     +   +  PL +L K +  
Sbjct: 114 DARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGNGFRIQAPLQYLSKAQII 173

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           ++    G      +    + +CY          G  C  C +C LR  G+     
Sbjct: 174 QVGVARG------VDYGLTVSCYQADE-----QGRACGKCDSCRLRADGFAAAGI 217


>gi|309798878|ref|ZP_07693139.1| ExsB protein [Streptococcus infantis SK1302]
 gi|308117527|gb|EFO54942.1| ExsB protein [Streptococcus infantis SK1302]
          Length = 217

 Score =  171 bits (432), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 100/226 (44%), Positives = 143/226 (63%), Gaps = 19/226 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WA + ++ VE ++F YGQR+ +E++    + ++       
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWAKEHYETVEAVTFAYGQRHHLEIQVAKEIAEEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL +++LG I+ ++LT ++ ++ ++  +PNTFV GRN +FL FAA LA + 
Sbjct: 57  -----IRHHILDMSLLGQITENALTSDLEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQR 111

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GIT+IV GVCETD+SGYPDCR   ++++   +NL M+    + TPLMWL K ETWKLA  
Sbjct: 112 GITDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWKLADQ 171

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
           +G  D V    E++ TCY G        G GC  CPAC+LRQ G  
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGTGCGDCPACHLRQHGLE 208


>gi|116749415|ref|YP_846102.1| exsB protein [Syntrophobacter fumaroxidans MPOB]
 gi|189029540|sp|A0LJR5|QUEC_SYNFM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|116698479|gb|ABK17667.1| exsB protein [Syntrophobacter fumaroxidans MPOB]
          Length = 234

 Score =  171 bits (432), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 82/238 (34%), Positives = 112/238 (47%), Gaps = 27/238 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A++LFSGG DS+TCL+ A         LSF Y QR+ VE+E        +       
Sbjct: 6   RRKAVVLFSGGIDSTTCLAVAKAEGFEAYALSFFYHQRHGVEVEAARRSAPALGAREHLV 65

Query: 68  KDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            +       LPL  +G  + +   +   +V ++   + +P T+VP RN IFL FA   A 
Sbjct: 66  LE-------LPLDRIGGSALTGHEEVPKDVPVEKMSDRIPATYVPARNTIFLSFALAWAE 118

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM------ESHVTVHTPLMWLKKY 178
            LG  +I IGV   DYSGYPDCR + I A E   NL +         + VHTPL+ L K 
Sbjct: 119 VLGAADIFIGVNALDYSGYPDCRPEYIAAFERMANLAIRETVEGRMRIKVHTPLIRLTKG 178

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           E  K   ++G      L    +H+CY          G  C  C +C LR+KG+ME   
Sbjct: 179 EIIKRGLELG------LDYSLTHSCYDPD-----ARGLACGHCDSCILRKKGFMEAGI 225


>gi|52843081|ref|YP_096880.1| ExsB protein [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
 gi|52630192|gb|AAU28933.1| ExsB protein [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
          Length = 233

 Score =  171 bits (432), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 70/240 (29%), Positives = 108/240 (45%), Gaps = 27/240 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+TCL+ A  +      LSF YGQR+  EL     + K +     K  
Sbjct: 7   KKAVVLLSGGLDSTTCLALAKSQGFACYALSFSYGQRHSAELCAATRIAKHMGAADHKIV 66

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L +A+ G  + +  +  V    +   +P T+VP RN IFL  A   A  +G 
Sbjct: 67  -------TLDIALFGGSALTDASIEVPEFKESPEIPVTYVPARNTIFLAMALGYAESIGA 119

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKL 183
            +I IG    DYS YPDCR + I + ++  NL  +        T++ PL +L K +T +L
Sbjct: 120 RDIFIGASSVDYSHYPDCRPEFIESFQSLANLATKAGIEGDRFTINAPLQYLSKVQTIQL 179

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQ 239
             ++G      +    + +CY          G  C  C +C  R++G+         +YQ
Sbjct: 180 GTELG------VDYGLTVSCYQANEA-----GEACGQCDSCTFRKRGFKSAGVDDPTRYQ 228


>gi|149191046|ref|ZP_01869306.1| predicted aluminum resistance protein [Vibrio shilonii AK1]
 gi|148835074|gb|EDL52051.1| predicted aluminum resistance protein [Vibrio shilonii AK1]
          Length = 228

 Score =  171 bits (432), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 98/232 (42%), Positives = 148/232 (63%), Gaps = 21/232 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL+++D V  ++FDYGQR+K+E+E    +  K+        
Sbjct: 2   KKAVVVFSGGQDSTTCLVQALEQYDEVHAITFDYGQRHKLEIEVAEALANKL-------- 53

Query: 69  DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            ++    ++ +++L +++ SSLT++   V+ ++Q+N LPN+FVPGRNI+FL  A   AY+
Sbjct: 54  -NVKAHKVMDVSLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQ 112

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G   ++ GVCETD+SGYPDCR+D I+A+ +A+  GM+    + TPLMWL K ETW LA 
Sbjct: 113 IGAQAVITGVCETDFSGYPDCRNDFIKALNSALVQGMDREFDIVTPLMWLDKAETWALAD 172

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                + ++LI EE+ TCY G        G GC  CP+C LR  G   + E 
Sbjct: 173 K---FNALSLIREETLTCYNG------VIGDGCGDCPSCDLRANGLNHYLEN 215


>gi|49081904|gb|AAT50352.1| PA0976 [synthetic construct]
          Length = 225

 Score =  171 bits (432), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 65/235 (27%), Positives = 99/235 (42%), Gaps = 24/235 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T ++ A        T+SFDYGQR++ EL+    V +++  +  K
Sbjct: 2   NQKKAVILLSGGLDSATVVAMAKADGYACYTMSFDYGQRHRAELQAAERVARQLGVIEHK 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     L L  +G  + +  +  V     +      +VP RN +FL  A   A  L
Sbjct: 62  VIG-------LDLNGMGGSALTDESIAVPESPSEGIPVT-YVPARNTVFLSLALGWAEVL 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETW 181
              +I IGV   DYSGYPDCR + + A E   NL  +     +   +  PL +L K +  
Sbjct: 114 DARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGNGFRIQAPLQYLSKAQII 173

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           +     G      +    + +CY          G  C  C +C LR  G+     
Sbjct: 174 QAGVARG------VDYGLTVSCYQADE-----QGRACGKCDSCRLRADGFAAAGI 217


>gi|15596173|ref|NP_249667.1| hypothetical protein PA0976 [Pseudomonas aeruginosa PAO1]
 gi|107100432|ref|ZP_01364350.1| hypothetical protein PaerPA_01001457 [Pseudomonas aeruginosa PACS2]
 gi|116048901|ref|YP_792298.1| hypothetical protein PA14_51670 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218893053|ref|YP_002441922.1| hypothetical protein PLES_43381 [Pseudomonas aeruginosa LESB58]
 gi|254245259|ref|ZP_04938581.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|296390665|ref|ZP_06880140.1| hypothetical protein PaerPAb_21028 [Pseudomonas aeruginosa PAb1]
 gi|81541661|sp|Q9I4Z2|QUEC_PSEAE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|122258008|sp|Q02ID8|QUEC_PSEAB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764368|sp|B7UXV6|QUEC_PSEA8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|9946884|gb|AAG04365.1|AE004531_2 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|32454317|gb|AAP82946.1| conserved hypothetical protein [Pseudomonas aeruginosa PA14]
 gi|115584122|gb|ABJ10137.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126198637|gb|EAZ62700.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|218773281|emb|CAW29093.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
          Length = 224

 Score =  171 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 65/235 (27%), Positives = 99/235 (42%), Gaps = 24/235 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T ++ A        T+SFDYGQR++ EL+    V +++  +  K
Sbjct: 2   NQKKAVILLSGGLDSATVVAMAKADGYACYTMSFDYGQRHRAELQAAERVARQLGVIEHK 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     L L  +G  + +  +  V     +      +VP RN +FL  A   A  L
Sbjct: 62  VIG-------LDLNGMGGSALTDESIAVPESPSEGIPVT-YVPARNTVFLSLALGWAEVL 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETW 181
              +I IGV   DYSGYPDCR + + A E   NL  +     +   +  PL +L K +  
Sbjct: 114 DARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGNGFRIQAPLQYLSKAQII 173

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           +     G      +    + +CY          G  C  C +C LR  G+     
Sbjct: 174 QAGVARG------VDYGLTVSCYQADE-----QGRACGKCDSCRLRADGFAAAGI 217


>gi|167623865|ref|YP_001674159.1| exsB protein [Shewanella halifaxensis HAW-EB4]
 gi|189029313|sp|B0TSC0|QUEC_SHEHH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|167353887|gb|ABZ76500.1| exsB protein [Shewanella halifaxensis HAW-EB4]
          Length = 229

 Score =  171 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 99/228 (43%), Positives = 146/228 (64%), Gaps = 21/228 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++FSGGQDS+TCL  AL +FD V  ++FDYGQR++ E+E    +   +         
Sbjct: 3   KAVVVFSGGQDSTTCLIQALQQFDEVHGITFDYGQRHREEIEIAKELATNL--------- 53

Query: 70  SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            L    ++ + +L +++ S+LT++   V+ ++ DN LPNTFVPGRNI+FL  A   AY+L
Sbjct: 54  KLASHKVMDVTLLNELAISALTRDSIPVSNELMDNGLPNTFVPGRNILFLTLAGIYAYQL 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   ++ GVCETD+SGYPDCR+D ++A++ A+  GM+  +T+ TPLMWL K ETW LA  
Sbjct: 114 GADTVITGVCETDFSGYPDCRNDFVKAMQAALEQGMDKKLTIQTPLMWLDKAETWALADK 173

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
               D + L+  E+ TCY G +      G GC +CPAC LR++G  E+
Sbjct: 174 ---FDSLELVRNETLTCYNGIK------GDGCGTCPACLLRKRGLEEY 212


>gi|317129079|ref|YP_004095361.1| exsB protein [Bacillus cellulosilyticus DSM 2522]
 gi|315474027|gb|ADU30630.1| exsB protein [Bacillus cellulosilyticus DSM 2522]
          Length = 218

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 96/236 (40%), Positives = 145/236 (61%), Gaps = 21/236 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                +++FSGGQDS+TCL WAL ++D VE ++FDY QR+  E++    +  ++      
Sbjct: 2   NKNKVIVVFSGGQDSTTCLFWALKKYDEVEAVTFDYHQRHSEEIQVAKEITSELK----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKI--QDNNLPNTFVPGRNIIFLVFAATLAY 124
                 + HIL +++L  ++ S+LT+   +    +   LP+TFVPGRN+IFL FA  LA 
Sbjct: 57  -----VKHHILDMSLLNQLAPSALTREEIVVKDGEAGGLPSTFVPGRNLIFLSFATILAR 111

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++G  +IV GVCETD+SGYPDCR   I+++  ++NL M+    +HTPLMWL K ETWKLA
Sbjct: 112 QIGAKHIVTGVCETDFSGYPDCRDVFIKSLNVSLNLSMDDQFVIHTPLMWLDKSETWKLA 171

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
            D+     +  + +++ TCY G R      G GC  CPAC LR+KG  ++  + ++
Sbjct: 172 DDL---HALQYVRDKTLTCYNGIR------GDGCGDCPACKLRKKGLEKYLIEKEN 218


>gi|104783063|ref|YP_609561.1| hypothetical protein PSEEN4083 [Pseudomonas entomophila L48]
 gi|122402284|sp|Q1I6F8|QUEC_PSEE4 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|95112050|emb|CAK16777.1| conserved hypothetical protein; ExsB protein [Pseudomonas
           entomophila L48]
          Length = 224

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 67/234 (28%), Positives = 101/234 (43%), Gaps = 24/234 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+T ++ A        T+SFDYGQR++ EL+    V + +  +  K  
Sbjct: 4   KRAVILLSGGLDSATVVAMAKAEGYACYTMSFDYGQRHRAELDAAARVARDLGVVEHKVI 63

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L L  +G  + +  + +V        +P T+VP RN +FL  A   A  L  
Sbjct: 64  G-------LNLNGIGGSALTDNSIDVPEA-PGEGIPVTYVPARNTVFLSLALGWAEVLEA 115

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKL 183
            +I IGV   DYSGYPDCR + + A E   NL  +         +  PL  L K +  + 
Sbjct: 116 RDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAPLQNLSKAQIVQA 175

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
               G      +    + +CY    +     G  C  C +C LR  G+     +
Sbjct: 176 GIAQG------VDYSLTVSCYQADDE-----GRACGKCDSCRLRADGFKAAGVE 218


>gi|229521472|ref|ZP_04410891.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae TM 11079-80]
 gi|229341570|gb|EEO06573.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae TM 11079-80]
          Length = 231

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 97/229 (42%), Positives = 145/229 (63%), Gaps = 21/229 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  FD V  ++FDYGQR+K+E+E    + K++        
Sbjct: 2   KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQQLAKQLG------- 54

Query: 69  DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +    ++ +++L +++ SSLT++   V+ ++Q N LPN+FVPGRNI+FL  A   AY+
Sbjct: 55  --VTAHKVMDVSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQ 112

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G T ++ GVCETD+SGYPDCR + ++A+  A+  GM+  + + TPLMWL K ETW LA 
Sbjct: 113 IGATTVITGVCETDFSGYPDCRDEFVQAMNQALAKGMDLPLMIRTPLMWLNKAETWALAD 172

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            +G    ++L+  ++ TCY G        G GC  CPAC LRQ G   +
Sbjct: 173 QLGA---LDLVRHQTLTCYNG------LIGDGCGECPACGLRQAGLKAY 212


>gi|330877969|gb|EGH12118.1| exsB protein [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 221

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 67/233 (28%), Positives = 101/233 (43%), Gaps = 24/233 (10%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+++      A++L SGG DS+T ++ A        T+SFDYGQR++ EL+    V + +
Sbjct: 8   MSELTNTEKRAVILLSGGLDSATVVAMARAEGYACYTMSFDYGQRHRAELDAAARVARDL 67

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  K          L L  +G  + +  +  V     +      +VP RN +FL  A 
Sbjct: 68  GAVEHKVIG-------LNLNGIGGSALTDSSIAVPESPSEGIPIT-YVPARNTVFLSLAL 119

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWL 175
             A  LG  +I IGV   DYSGYPDCR + + + E   NL  +        T+  PL  L
Sbjct: 120 GWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERMANLATKAGVEGQGFTIRAPLQNL 179

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQ 228
            K +  K    +G      +    + +CY          G  C  C +C LR 
Sbjct: 180 SKSDIVKAGAALG------VDYSLTVSCYQADD-----QGRACGKCDSCRLRA 221


>gi|157962170|ref|YP_001502204.1| exsB protein [Shewanella pealeana ATCC 700345]
 gi|189029314|sp|A8H532|QUEC_SHEPA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|157847170|gb|ABV87669.1| exsB protein [Shewanella pealeana ATCC 700345]
          Length = 227

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 100/228 (43%), Positives = 146/228 (64%), Gaps = 21/228 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++FSGGQDS+TCL  AL  FD V  ++FDYGQR++ E+E    +  K+         
Sbjct: 3   KAVVVFSGGQDSTTCLIQALQHFDEVHGITFDYGQRHREEIEIAKTLASKL--------- 53

Query: 70  SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            L    ++ + +L +++ S+LT++   V+  + DN LPNTFVPGRNI+FL  A   AY+L
Sbjct: 54  KLASHKVMDVTLLNELAISALTRDSIPVSNDLMDNGLPNTFVPGRNILFLTLAGIYAYQL 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   ++ GVCETD+SGYPDCR+D ++A++ A+  GM+  +T+ TPLMWL K ETW LA  
Sbjct: 114 GADVVITGVCETDFSGYPDCRNDFVKAMQAALEQGMDKKLTIQTPLMWLDKAETWALADK 173

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
                 ++LI +E+ TCY G +      G GC +CPAC LR++G  E+
Sbjct: 174 ---YQSLDLIRDETLTCYNGIK------GDGCGTCPACLLRKRGLEEY 212


>gi|299541809|ref|ZP_07052132.1| queuosine biosynthesis protein [Lysinibacillus fusiformis ZC1]
 gi|298725547|gb|EFI66188.1| queuosine biosynthesis protein [Lysinibacillus fusiformis ZC1]
          Length = 219

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 94/230 (40%), Positives = 141/230 (61%), Gaps = 21/230 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WA +RF+ +E ++FDYGQR+++E++C   + +++      
Sbjct: 2   KKEKAIVVFSGGQDSTTCLFWAKERFEEIEAVTFDYGQRHRLEIDCAKVITEELG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL--PNTFVPGRNIIFLVFAATLAY 124
                 + HIL +++L  ++ ++LT+         N   P+TFVPGRN++FL FA  LA 
Sbjct: 57  -----IKHHILDMSLLNQLAPNALTRQDIKVKDGENGELPSTFVPGRNLLFLSFAGVLAS 111

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++G  +IV GVCETD+SGYPDCR   I+++   +NL M+    + TPLMWL K +TW+LA
Sbjct: 112 QVGAKHIVTGVCETDFSGYPDCRDVFIKSLNVTLNLSMDDSFVIDTPLMWLNKAQTWELA 171

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
             +G    +  + E + TCY G          GC  CPAC LR KG  E+
Sbjct: 172 DQLGA---LEFVRERTLTCYNG------VIADGCGECPACKLRNKGLDEY 212


>gi|329955670|ref|ZP_08296578.1| protein ExsB [Bacteroides clarus YIT 12056]
 gi|328526073|gb|EGF53097.1| protein ExsB [Bacteroides clarus YIT 12056]
          Length = 226

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 94/231 (40%), Positives = 137/231 (59%), Gaps = 22/231 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +AL++FSGGQDS+TCL WA   F +V  LSF YGQ+++ E+E    + +K       
Sbjct: 2   NKEAALVVFSGGQDSTTCLFWAKREFKKVYALSFLYGQKHRKEVELAREIARKAE----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                 E  ++ ++ +G + H+SLT     +  +   + +PNTFVPGRN+ FL  AA  A
Sbjct: 57  -----VEFEVMDVSFIGRLGHNSLTDPGMVMDKEKPADGVPNTFVPGRNLFFLSIAAVYA 111

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              GI +IV GV +TD+SGYPDCR   I+++   +NL M+    +HTPLMW+ K ETW L
Sbjct: 112 REKGIDHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDGQFVLHTPLMWIDKAETWAL 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           A ++G   +++LI  E+ TCY G        G GC  CPAC LR++G  ++
Sbjct: 172 ADELG---VLDLIRHETLTCYNGIP------GDGCGHCPACKLRREGLEKY 213


>gi|54298878|ref|YP_125247.1| hypothetical protein lpp2945 [Legionella pneumophila str. Paris]
 gi|81369632|sp|Q5X101|QUEC_LEGPA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|53752663|emb|CAH14098.1| hypothetical protein lpp2945 [Legionella pneumophila str. Paris]
          Length = 228

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 69/240 (28%), Positives = 106/240 (44%), Gaps = 27/240 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+TCL+ A  +      LSF YGQR+  EL     + K +     K  
Sbjct: 2   KKAVVLLSGGLDSTTCLALAKSQGFACYALSFSYGQRHSAELCAATRIAKHMGAADHKIV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L  A+ G  + +  +  V    +   +P T+VP RN IFL  A   A  +G 
Sbjct: 62  -------TLDTALFGGSALTDASIEVPEFKESPEIPVTYVPARNTIFLAMALGYAESIGA 114

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKL 183
            +I IG    DYS YPDCR + I + ++  NL  +        T++ PL +L K +  +L
Sbjct: 115 RDIFIGASSVDYSHYPDCRPEFIESFQSLANLATKAGIEGDRFTINAPLQYLSKVQAIQL 174

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQ 239
             ++G      +    + +CY          G  C  C +C  R++G+         +YQ
Sbjct: 175 GTELG------VDYGLTVSCYQANEA-----GEACGQCDSCTFRKRGFKSAGVDDPTRYQ 223


>gi|152985628|ref|YP_001349881.1| hypothetical protein PSPA7_4532 [Pseudomonas aeruginosa PA7]
 gi|189038934|sp|A6V9Z6|QUEC_PSEA7 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|150960786|gb|ABR82811.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
          Length = 224

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 67/235 (28%), Positives = 101/235 (42%), Gaps = 24/235 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T ++ A        T+SFDYGQR++ EL+    V +++  +  K
Sbjct: 2   NQKKAVILLSGGLDSATVVAMAKADGYACYTMSFDYGQRHRAELQAAERVARQLGAIEHK 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     L L  +G  + +  +  V        +P T+VP RN +FL  A   A  L
Sbjct: 62  VIG-------LDLNGMGGSALTDDSIAVPEA-PSQGIPVTYVPARNTVFLSLALGWAEVL 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETW 181
              +I IGV   DYSGYPDCR + + A E   NL  +     +   +  PL +L K +  
Sbjct: 114 EARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGNGFRIQAPLQYLSKAQII 173

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           +     G      +    + +CY          G  C  C +C LR  G+     
Sbjct: 174 QAGVARG------VDYGLTVSCYQADD-----QGRACGKCDSCRLRADGFAAAGI 217


>gi|119487253|ref|ZP_01621004.1| hypothetical protein L8106_21052 [Lyngbya sp. PCC 8106]
 gi|119455808|gb|EAW36943.1| hypothetical protein L8106_21052 [Lyngbya sp. PCC 8106]
          Length = 229

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 69/235 (29%), Positives = 106/235 (45%), Gaps = 29/235 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DSST L  A         +SFDY QR++ EL     + +    +  +   
Sbjct: 2   KAVILLSGGLDSSTVLYQAKAEGYECYAISFDYQQRHQRELASAQQIAQSAGVVEHQVVK 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVA----MKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    L++ G  + +    ++     +     N+P T+VP RN IFL FA   A  
Sbjct: 62  -------FDLSLWGGSALTDRKIDLPNDRSLNQMSENIPITYVPARNTIFLSFALGYAET 114

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKKYET 180
           +  + + IGV   DYSGYPDCR D I A++    LG +       + +H+PL+ LKK E 
Sbjct: 115 VNASRVYIGVNALDYSGYPDCRPDYIAAMQDVFRLGTKQGREGNPILIHSPLIHLKKTEI 174

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            +L   +       +  E++ +CY G+          C  C +C LR   + E  
Sbjct: 175 IQLGNRL------RVPWEKTWSCYAGEEKS-------CGVCDSCKLRLAAFKELG 216


>gi|288957455|ref|YP_003447796.1| queuosine biosynthesis protein [Azospirillum sp. B510]
 gi|288909763|dbj|BAI71252.1| queuosine biosynthesis protein [Azospirillum sp. B510]
          Length = 242

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 78/242 (32%), Positives = 106/242 (43%), Gaps = 31/242 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A++L SGG DS+T L+ A     RV  LSF YGQR+ VELE    V   +       
Sbjct: 7   RKDAVVLVSGGLDSTTVLAIAKAEGYRVNALSFRYGQRHSVELEAARRVVAAMGVERHVI 66

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN-------NLPNTFVPGRNIIFLVFAA 120
            D       + L   G  + +            +        +P T+VP RN +FL FA 
Sbjct: 67  AD-------IDLRAFGGSALTDAIAVPKHDSAADLEAELGQGIPVTYVPARNTVFLSFAL 119

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME------SHVTVHTPLMW 174
             A  LG +++ IGV   DYSGYPDCR + I A ET  NL  +      S   +H PLM 
Sbjct: 120 AWAETLGASDLFIGVNALDYSGYPDCRPEYIAAFETLANLATKAGVEGGSRFRIHAPLMT 179

Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           L K    +   ++G      +    +H+CY          G  C +C +C LR KG+ E 
Sbjct: 180 LDKAAIVRRGLELG------VDYSLTHSCYDP-----TPAGLSCGACDSCLLRLKGFSEA 228

Query: 235 KE 236
             
Sbjct: 229 GT 230


>gi|229515738|ref|ZP_04405197.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae TMA 21]
 gi|229347507|gb|EEO12467.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae TMA 21]
          Length = 231

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 97/229 (42%), Positives = 145/229 (63%), Gaps = 21/229 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  FD V  ++FDYGQR+K+E+E    + K++        
Sbjct: 2   KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQQLAKQLG------- 54

Query: 69  DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +    ++ +++L +++ SSLT++   V+ ++Q N LPN+FVPGRNI+FL  A   AY+
Sbjct: 55  --VTAHKVMDVSLLNELAISSLTRDDIPVSYELQANGLPNSFVPGRNILFLTLAGIYAYQ 112

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G T ++ GVCETD+SGYPDCR + ++A+  A+  GM+  + + TPLMWL K ETW LA 
Sbjct: 113 IGATTVITGVCETDFSGYPDCRDEFVQAMNQALAKGMDLPLMIRTPLMWLNKAETWALAD 172

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            +G    ++L+  ++ TCY G        G GC  CPAC LRQ G   +
Sbjct: 173 QLGA---LDLVRHQTLTCYNG------LIGDGCGECPACGLRQAGLKAY 212


>gi|254468087|ref|ZP_05081493.1| exsB protein [beta proteobacterium KB13]
 gi|207086897|gb|EDZ64180.1| exsB protein [beta proteobacterium KB13]
          Length = 227

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 24/236 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +  A++L SGG DS T L+ A +       L   YGQR+  E +    + KK       
Sbjct: 1   MSKKAIVLLSGGLDSLTTLAIAQNDGFDCYALHVIYGQRHSSETKAARNIAKKYNLAE-- 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                  +  + ++ L   + ++    +  +  +      +VP RN I + FAA  A  L
Sbjct: 59  -----FREINVDMSWLKSSALTNHDMTIPEERSEGIPVT-YVPARNTIMMSFAAAWAESL 112

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETW 181
            I+++ +GV   DYSGYPDCR + I A +  +NLG +     +   +HTPL+ L K E  
Sbjct: 113 AISHLFLGVNAVDYSGYPDCRPEFIDAFKKMVNLGTKAAIEGTPFNIHTPLIGLTKDEII 172

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
               ++G      +    S +CY   +      G  C  C +CYLR++G+ +   K
Sbjct: 173 TKGCNLG------VDYSMSISCYQADQ-----NGNACGRCDSCYLRRQGFEKAGIK 217


>gi|153825260|ref|ZP_01977927.1| exsB protein [Vibrio cholerae MZO-2]
 gi|153828777|ref|ZP_01981444.1| exsB protein [Vibrio cholerae 623-39]
 gi|183179364|ref|ZP_02957575.1| exsB protein [Vibrio cholerae MZO-3]
 gi|254286182|ref|ZP_04961142.1| exsB protein [Vibrio cholerae AM-19226]
 gi|148875730|gb|EDL73865.1| exsB protein [Vibrio cholerae 623-39]
 gi|149741088|gb|EDM55147.1| exsB protein [Vibrio cholerae MZO-2]
 gi|150423851|gb|EDN15792.1| exsB protein [Vibrio cholerae AM-19226]
 gi|183012775|gb|EDT88075.1| exsB protein [Vibrio cholerae MZO-3]
          Length = 231

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 97/229 (42%), Positives = 145/229 (63%), Gaps = 21/229 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  FD V  ++FDYGQR+K+E+E    + K++        
Sbjct: 2   KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQQLAKQLG------- 54

Query: 69  DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +    ++ +++L +++ SSLT++   V+ ++Q N LPN+FVPGRNI+FL  A   AY+
Sbjct: 55  --VTAHKVMDVSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQ 112

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G T ++ GVCETD+SGYPDCR + ++A+  A+  GM+  + + TPLMWL K ETW LA 
Sbjct: 113 IGATTVITGVCETDFSGYPDCRDEFVQAMNQALAKGMDLPLMIRTPLMWLNKAETWALAD 172

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            +G    ++L+  ++ TCY G        G GC  CPAC LRQ G   +
Sbjct: 173 QLGA---LDLVRHQTLTCYNG------LIGDGCGECPACGLRQAGLKAY 212


>gi|219669238|ref|YP_002459673.1| exsB protein [Desulfitobacterium hafniense DCB-2]
 gi|254764332|sp|B8G1I4|QUEC_DESHD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|219539498|gb|ACL21237.1| exsB protein [Desulfitobacterium hafniense DCB-2]
          Length = 233

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 74/234 (31%), Positives = 116/234 (49%), Gaps = 27/234 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+TC+S A      +  LSFDYGQR++ ELE    V +          
Sbjct: 2   KKAVVLLSGGLDSTTCMSVAHKAGYELYPLSFDYGQRHQRELEAAKAVAQYY-------- 53

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             + E  ++ +  +G  + +  +  V    +D  +P T+VP RNI+FL +A      +G 
Sbjct: 54  -KVKEHRLIKIEHVGGSALTDASIQVPDYTEDGQIPVTYVPARNILFLSYALGYGEVIGA 112

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKL 183
             I IG+   DYSGYPDCR + ++A +  +++G +       + +  PL++L K ET +L
Sbjct: 113 EAIFIGISSVDYSGYPDCRPEFLQAFQKVVDVGTKAGVSGQTIAIKAPLLYLSKGETIQL 172

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           A + G        L  + +CY G           C +C +C LR KG+ E   K
Sbjct: 173 AAENGA------PLHHTTSCYRGGEK-------ACGTCDSCTLRLKGFAEAGIK 213


>gi|46201268|ref|ZP_00055430.2| COG0603: Predicted PP-loop superfamily ATPase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 229

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 74/233 (31%), Positives = 106/233 (45%), Gaps = 26/233 (11%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           A++L SGG DS+T L+ A         L+F YGQR+ VE+     V   +     +  D 
Sbjct: 6   AIVLLSGGLDSATVLAIAKAEGFTPSALTFRYGQRHAVEIRAAERVAAALRVSDHRVAD- 64

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYRLG 127
                 + L + G  + +S        + +     +P T+VP RN I L FA   A  LG
Sbjct: 65  ------IDLRVFGGSALTSDIAVPKGNLDEAIPEGIPVTYVPARNTIMLSFALAFAEVLG 118

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWK 182
             +I +GV   DYSGYPDCR D I+A E   NL  +     + +T+HTPL+ L K +  +
Sbjct: 119 AADIFVGVNAVDYSGYPDCRPDYIKAFEAMANLATKAAVEGTRMTLHTPLIDLTKADIIR 178

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
               +G      +    + TCY          G  C  C +C LR KG+ E  
Sbjct: 179 RGLALG------VDYSLTSTCYDPD-----PMGRACGHCDSCRLRLKGFAEAG 220


>gi|170723150|ref|YP_001750838.1| exsB protein [Pseudomonas putida W619]
 gi|254764369|sp|B1JD61|QUEC_PSEPW RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|169761153|gb|ACA74469.1| exsB protein [Pseudomonas putida W619]
          Length = 224

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 66/235 (28%), Positives = 100/235 (42%), Gaps = 24/235 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A++L SGG DS+T ++ A        T+SFDYGQR++ EL     V + +  +  K 
Sbjct: 3   EKRAVILLSGGLDSATVVAMAKAEGYSCYTMSFDYGQRHRAELNAAARVARDLGVVEHKV 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    L L  +G  + +  + +V        +P T+VP RN +FL  A   A  L 
Sbjct: 63  IG-------LNLDGIGGSALTDSSIDVPET-PGEGIPVTYVPARNTVFLSLALGWAEVLQ 114

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWK 182
             +I IGV   DYSGYPDCR + + A E   NL  +         +  PL  + K +  +
Sbjct: 115 ARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAPLQNMSKAQIVQ 174

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                G      +    + +CY    +     G  C  C +C LR  G+     +
Sbjct: 175 AGMARG------VDYSLTVSCYQADDE-----GRACGKCDSCRLRADGFKAAGVE 218


>gi|15641378|ref|NP_231010.1| queuosine biosynthesis protein QueC [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121728522|ref|ZP_01681545.1| exsB protein [Vibrio cholerae V52]
 gi|147673208|ref|YP_001216925.1| queuosine biosynthesis protein QueC [Vibrio cholerae O395]
 gi|153819361|ref|ZP_01972028.1| exsB protein [Vibrio cholerae NCTC 8457]
 gi|153821348|ref|ZP_01974015.1| exsB protein [Vibrio cholerae B33]
 gi|227081537|ref|YP_002810088.1| exsB protein [Vibrio cholerae M66-2]
 gi|229505053|ref|ZP_04394563.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae BX 330286]
 gi|229511277|ref|ZP_04400756.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae B33]
 gi|229518395|ref|ZP_04407839.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae RC9]
 gi|229608057|ref|YP_002878705.1| queuosine biosynthesis protein QueC [Vibrio cholerae MJ-1236]
 gi|254848488|ref|ZP_05237838.1| exsB protein [Vibrio cholerae MO10]
 gi|255745753|ref|ZP_05419701.1| queuosine Biosynthesis QueC ATPase [Vibrio cholera CIRS 101]
 gi|262158969|ref|ZP_06030081.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae INDRE 91/1]
 gi|262169328|ref|ZP_06037020.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae RC27]
 gi|262192385|ref|ZP_06050538.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae CT 5369-93]
 gi|298498550|ref|ZP_07008357.1| exsB protein [Vibrio cholerae MAK 757]
 gi|81545006|sp|Q9KS93|QUEC_VIBCH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|172047686|sp|A5F8G4|QUEC_VIBC3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764389|sp|C3LM61|QUEC_VIBCM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|9655860|gb|AAF94524.1| exsB protein [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121629186|gb|EAX61626.1| exsB protein [Vibrio cholerae V52]
 gi|126510106|gb|EAZ72700.1| exsB protein [Vibrio cholerae NCTC 8457]
 gi|126521166|gb|EAZ78389.1| exsB protein [Vibrio cholerae B33]
 gi|146315091|gb|ABQ19630.1| exsB protein [Vibrio cholerae O395]
 gi|227009425|gb|ACP05637.1| exsB protein [Vibrio cholerae M66-2]
 gi|227013283|gb|ACP09493.1| exsB protein [Vibrio cholerae O395]
 gi|229345110|gb|EEO10084.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae RC9]
 gi|229351242|gb|EEO16183.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae B33]
 gi|229357276|gb|EEO22193.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae BX 330286]
 gi|229370712|gb|ACQ61135.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae MJ-1236]
 gi|254844193|gb|EET22607.1| exsB protein [Vibrio cholerae MO10]
 gi|255736828|gb|EET92225.1| queuosine Biosynthesis QueC ATPase [Vibrio cholera CIRS 101]
 gi|262022141|gb|EEY40850.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae RC27]
 gi|262029154|gb|EEY47806.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae INDRE 91/1]
 gi|262031738|gb|EEY50323.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae CT 5369-93]
 gi|297542883|gb|EFH78933.1| exsB protein [Vibrio cholerae MAK 757]
          Length = 231

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 97/229 (42%), Positives = 145/229 (63%), Gaps = 21/229 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  FD V  ++FDYGQR+K+E+E    + K++        
Sbjct: 2   KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQQLAKQLG------- 54

Query: 69  DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +    ++ +++L +++ SSLT++   V+ ++Q N LPN+FVPGRNI+FL  A   AY+
Sbjct: 55  --VTAHKVMDVSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQ 112

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G T ++ GVCETD+SGYPDCR + ++A+  A+  GM+  + + TPLMWL K ETW LA 
Sbjct: 113 IGATTVITGVCETDFSGYPDCRDEFVQAMNQALAKGMDLPLMIRTPLMWLNKAETWALAD 172

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            +G    ++L+  ++ TCY G        G GC  CPAC LRQ G   +
Sbjct: 173 QLGA---LDLVRHQTLTCYNG------LIGDGCGECPACGLRQAGLKAY 212


>gi|323465119|gb|ADX77272.1| queuosine biosynthesis protein QueC [Staphylococcus
           pseudintermedius ED99]
          Length = 222

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 93/237 (39%), Positives = 145/237 (61%), Gaps = 20/237 (8%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M++++     AL++FSGGQDS+TCL +A   F  VE ++F+YGQR+  E+E    + +  
Sbjct: 1   MSEVLN-NEKALVVFSGGQDSTTCLFYAKKHFKEVELVTFEYGQRHAKEIEVAKEIAE-- 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                   D   + H+L +A+L  ++ ++LT +       N++PNTFVP RN++FL FA 
Sbjct: 58  --------DQGLKHHVLDMALLSQLTPNALTSHDMTIDSHNDVPNTFVPARNLLFLSFAG 109

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            LAY++G  +++ GVCETD+SGYPDCR   I+++   +NL M+    +HTPLMWL K ET
Sbjct: 110 ALAYQIGAKHLITGVCETDFSGYPDCRDSFIKSMNVTLNLAMDRDFVIHTPLMWLNKKET 169

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           W L+ D+G   +++ + + + TCY G          GC  CPAC LRQ+G  ++  +
Sbjct: 170 WALSDDLG---VLDYVRDRTLTCYNGI------IAEGCGECPACQLRQRGLNQYLAE 217


>gi|152968323|ref|YP_001364107.1| exsB protein [Kineococcus radiotolerans SRS30216]
 gi|189038919|sp|A6WGA4|QUEC_KINRD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|151362840|gb|ABS05843.1| exsB protein [Kineococcus radiotolerans SRS30216]
          Length = 229

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 67/237 (28%), Positives = 103/237 (43%), Gaps = 26/237 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T L+ A  +      LSF YGQR+ VEL+    V   +      
Sbjct: 1   MDRPAVVLLSGGLDSTTVLAIAKSQGFTPYALSFAYGQRHAVELDAARRVATALGAAGHV 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN---NLPNTFVPGRNIIFLVFAATLA 123
                     + L + G  + ++          ++   ++P T+VP RN IFL +A   A
Sbjct: 61  IA-------TIDLTVFGGSALTADIAVPKHDTVEDLQADIPITYVPARNTIFLSYALAYA 113

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKY 178
             +G  +I IGV   DYSGYPDCR + + A +    L   + V      +H PLM + K 
Sbjct: 114 EVVGAGDIFIGVNALDYSGYPDCRPEYVDAFQAMGRLATRAGVQGTELTIHAPLMQMTKA 173

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           +  +    +G      +    + +CY          G+ C  C +C LR  G+ E  
Sbjct: 174 DIVRAGLALG------VDYGMTSSCYDPD-----AAGHPCGHCDSCLLRLNGFAEAG 219


>gi|307707094|ref|ZP_07643891.1| queuosine biosynthesis protein queC [Streptococcus mitis SK321]
 gi|307617620|gb|EFN96790.1| queuosine biosynthesis protein queC [Streptococcus mitis SK321]
          Length = 217

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 99/225 (44%), Positives = 142/225 (63%), Gaps = 19/225 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WA + ++ VE ++F YGQR+ +E++    + K+       
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWAKEHYETVEAVTFAYGQRHHLEIQVAREIAKEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL +++LG I+ ++LT ++ ++ ++  +PNTFV GRN +FL FAA LA + 
Sbjct: 57  -----IRHHILDMSLLGQITENALTSDLEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQR 111

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI +IV GVCETD+SGYPDCR   ++++   +NL M+    + TPLMWL K ETW+LA  
Sbjct: 112 GIKDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWELADQ 171

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
           +G  D V    E++ TCY G        G GC  CPAC+LRQ G 
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGSGCGECPACHLRQHGL 207


>gi|319891711|ref|YP_004148586.1| Queuosine Biosynthesis QueC ATPase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317161407|gb|ADV04950.1| Queuosine Biosynthesis QueC ATPase [Staphylococcus pseudintermedius
           HKU10-03]
          Length = 222

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 93/237 (39%), Positives = 145/237 (61%), Gaps = 20/237 (8%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M++++     AL++FSGGQDS+TCL +A   F  VE ++F+YGQR+  E+E    + +  
Sbjct: 1   MSEVLN-NEKALVVFSGGQDSTTCLFYAKKHFKEVELVTFEYGQRHVKEIEVAKEIAE-- 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                   D   + H+L +A+L  ++ ++LT +       N++PNTFVP RN++FL FA 
Sbjct: 58  --------DQGLKHHVLDMALLSQLTPNALTSHDMTIESHNDVPNTFVPARNLLFLSFAG 109

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            LAY++G  +++ GVCETD+SGYPDCR   I+++   +NL M+    +HTPLMWL K ET
Sbjct: 110 ALAYQIGAKHLITGVCETDFSGYPDCRDSFIKSMNVTLNLAMDRDFVIHTPLMWLNKKET 169

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           W L+ D+G   +++ + + + TCY G          GC  CPAC LRQ+G  ++  +
Sbjct: 170 WALSDDLG---VLDYVRDRTLTCYNGI------IAEGCGECPACQLRQRGLEQYLAE 217


>gi|167035185|ref|YP_001670416.1| exsB protein [Pseudomonas putida GB-1]
 gi|189038937|sp|B0KTI3|QUEC_PSEPG RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|166861673|gb|ABZ00081.1| exsB protein [Pseudomonas putida GB-1]
          Length = 228

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 65/234 (27%), Positives = 97/234 (41%), Gaps = 24/234 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+T ++ A        T+SFDYGQR++ EL     V + +  +  K  
Sbjct: 4   KRAVILLSGGLDSATVVAMAKAEGYSCYTMSFDYGQRHRAELNAAARVARDLGVVEHKVI 63

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L L  +G  + +    +V     +      +VP RN +FL  A   A  L  
Sbjct: 64  G-------LNLDGIGGSALTDSNIDVPEAPSEGIPVT-YVPARNTVFLSLALGWAEVLEA 115

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKL 183
            +I IGV   DYSGYPDCR + + A E   NL  +         +  PL  + K +  + 
Sbjct: 116 RDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAPLQNMSKAQIVQA 175

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
               G      +    + +CY    D     G  C  C +C LR  G+     +
Sbjct: 176 GMARG------VDYSLTVSCYQADDD-----GRACGKCDSCRLRADGFKAAGVE 218


>gi|261252910|ref|ZP_05945483.1| queuosine Biosynthesis QueC ATPase [Vibrio orientalis CIP 102891]
 gi|260936301|gb|EEX92290.1| queuosine Biosynthesis QueC ATPase [Vibrio orientalis CIP 102891]
          Length = 232

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 96/231 (41%), Positives = 139/231 (60%), Gaps = 15/231 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  FD V  ++FDYGQR+K+E+E    + K++     K  
Sbjct: 2   KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQSLAKELGVAAHKVM 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D      +  L  L   S +     V+ ++Q+N LPN+FVPGRNI+FL  A   AY++G 
Sbjct: 62  D------VGLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIGA 115

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
            +++ GVCETD+SGYPDCR+D ++A+  A+  GM+  + + TPLMWL K ETW LA    
Sbjct: 116 QSVITGVCETDFSGYPDCRNDFVKAMNRALVQGMDRDLEIATPLMWLDKAETWALADQ-- 173

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
             D + L+ E++ TCY G        G GC  CP+C LR+ G   + +  +
Sbjct: 174 -YDALQLVREKTLTCYNGI------IGDGCGDCPSCDLRKVGLNSYLDNRE 217


>gi|254448701|ref|ZP_05062159.1| exsB protein [gamma proteobacterium HTCC5015]
 gi|198261709|gb|EDY85996.1| exsB protein [gamma proteobacterium HTCC5015]
          Length = 222

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 78/240 (32%), Positives = 112/240 (46%), Gaps = 28/240 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DSST L+ A     +  TLSFDYGQRN+ EL     + +++  +  K  
Sbjct: 2   KKAVVLLSGGLDSSTVLALARAEGYQCHTLSFDYGQRNRAELVASKRLSEELGAVEHKII 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L L  +G  + +    +V  + +   +P T+VP RN +FL  A   A  L  
Sbjct: 62  Q-------LDLRAIGGSALTDSRIDVPTQ-ESEGVPVTYVPARNTVFLSIALGWAEVLEA 113

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKL 183
            ++ IGV   DYSGYPDCR + I A +T  NL  +       +TVHTPL+ L K E  + 
Sbjct: 114 YDVFIGVNAVDYSGYPDCRPEFIEAFQTMANLATKASTEGHPLTVHTPLIDLSKSEIIQK 173

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF----KEKYQ 239
               G      L    + +CY          G  C  C AC LR++G+         +Y+
Sbjct: 174 GVAAG------LDYGLTVSCYDANEA-----GEACGQCDACRLRRQGFEAAEVADPTRYR 222


>gi|94263299|ref|ZP_01287115.1| ExsB [delta proteobacterium MLMS-1]
 gi|93456382|gb|EAT06506.1| ExsB [delta proteobacterium MLMS-1]
          Length = 239

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 76/245 (31%), Positives = 103/245 (42%), Gaps = 22/245 (8%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M +  +   +A++L SGG DS+T L+WA     R   LSFDYGQR+  ELE       + 
Sbjct: 1   MTENNQPGEAAVVLLSGGLDSTTVLAWASTAGYRCHCLSFDYGQRHTHELELARQNAARW 60

Query: 61  VELMPKWKDS-----LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
             +             G      LA+       +L+ + A           +VPGRN IF
Sbjct: 61  GAVQHLVLKLGLEAIGGSALTSELAVPKADPAGTLSTDPAETGAGQIPVT-YVPGRNTIF 119

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHT 170
           L  A   A  LG   I IGV   DYSGYPDCR D + +     NLG +         +  
Sbjct: 120 LSCAVAWAEVLGAGEIFIGVNAVDYSGYPDCRPDFLESFNRTANLGTKAGREGRGFRIQA 179

Query: 171 PLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
           PL+ L K E  K    +G      +    +H+CY      R      C  C AC LR++G
Sbjct: 180 PLLRLSKAEIIKKGLALG------VDYSLTHSCYDPDEHHR-----PCGRCDACRLRRRG 228

Query: 231 WMEFK 235
           +    
Sbjct: 229 FAAAG 233


>gi|258512334|ref|YP_003185768.1| exsB protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius
           DSM 446]
 gi|257479060|gb|ACV59379.1| exsB protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius
           DSM 446]
          Length = 227

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 71/233 (30%), Positives = 111/233 (47%), Gaps = 24/233 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS+TC+  A      +  ++FDYGQR+++ELE    V         +   
Sbjct: 3   KAVVILSGGLDSATCMGIAHAAGYELCPITFDYGQRHRIELESAKKVAAFYGVKDHRIVS 62

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 I  L  +G  + +  + +V  +     +P T+VPGRN++FL  AA+ A  +G  
Sbjct: 63  ------IDFLRQIGGSALTDESIDVPTEGVSREIPVTYVPGRNLLFLAIAASYAEVIGAE 116

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKLA 184
            I IGV   DYSGYPDCR + I  +E  + +G +       + + TPL+   K E  +  
Sbjct: 117 AIYIGVNALDYSGYPDCRPEFIEGVEHVLRIGTKAGVEGRPIRIETPLLHWTKGEIVRKG 176

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            ++G      +  E + +CY G           C  C +C LR KG+ E   K
Sbjct: 177 LELG------VPYELTTSCYQGGE-------VACGECDSCRLRLKGFAEAGAK 216


>gi|94266965|ref|ZP_01290615.1| ExsB [delta proteobacterium MLMS-1]
 gi|93452343|gb|EAT02971.1| ExsB [delta proteobacterium MLMS-1]
          Length = 239

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 76/245 (31%), Positives = 103/245 (42%), Gaps = 22/245 (8%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M +  +   +A++L SGG DS+T L+WA     R   LSFDYGQR+  ELE       + 
Sbjct: 1   MTENNQPGEAAVVLLSGGLDSTTVLAWASTAGYRCHCLSFDYGQRHTHELELARQNAARW 60

Query: 61  VELMPKWKDS-----LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
             +             G      LA+       +L+ + A           +VPGRN IF
Sbjct: 61  GAVQHLVLRLGLEAIGGSALTSELAVPKADPAGTLSTDPAETGAGQIPVT-YVPGRNTIF 119

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHT 170
           L  A   A  LG   I IGV   DYSGYPDCR D + +     NLG +         +  
Sbjct: 120 LSCAVAWAEVLGAGEIFIGVNAVDYSGYPDCRPDFLESFNRTANLGTKAGREGRGFRIQA 179

Query: 171 PLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
           PL+ L K E  K    +G      +    +H+CY      R      C  C AC LR++G
Sbjct: 180 PLLRLSKAEIIKKGLALG------VDYSLTHSCYDPDEHHR-----PCGRCDACRLRRRG 228

Query: 231 WMEFK 235
           +    
Sbjct: 229 FAAAG 233


>gi|190575558|ref|YP_001973403.1| putative transcriptional regulator [Stenotrophomonas maltophilia
           K279a]
 gi|254764387|sp|B2FRM5|QUEC_STRMK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|190013480|emb|CAQ47115.1| putative transcriptional regulator [Stenotrophomonas maltophilia
           K279a]
          Length = 221

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 70/232 (30%), Positives = 99/232 (42%), Gaps = 25/232 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+  ++ A ++   V  LS  YGQR+  EL+    V K    +  K  
Sbjct: 2   KKAVVLLSGGMDSAAVIAMAQEQGFAVHALSVRYGQRHTSELDAAARVAKAQGVVAHKIV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D       + L  +G  + +              +P T+VP RN I L  A   A  LG 
Sbjct: 62  D-------VDLRSIGGSALTDDIDVPEAG--GAGIPVTYVPARNTIMLSLALGWAEVLGA 112

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
            +I  GV   DYSGYPDCR + + A +   NL  +S V      VH PL +L K +    
Sbjct: 113 NDIFCGVNAVDYSGYPDCRPEFVAAFQALANLATKSGVEGAGIKVHAPLQFLSKGQIVSE 172

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
              +G      +    + +CY          G  C  C AC LR +G+ E  
Sbjct: 173 GVRLG------VDFGLTVSCYNAD-----ANGAACGHCDACRLRAQGFAEAG 213


>gi|110816205|sp|Q24VU8|QUEC2_DESHY RecName: Full=7-cyano-7-deazaguanine synthase 2; AltName:
           Full=7-cyano-7-carbaguanine synthase 2; AltName:
           Full=PreQ(0) synthase 2; AltName: Full=Queuosine
           biosynthesis protein queC 2
          Length = 233

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 74/234 (31%), Positives = 116/234 (49%), Gaps = 27/234 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+TC+S A      +  LSFDYGQR++ ELE    V +          
Sbjct: 2   KKAVVLLSGGLDSTTCMSVAHKAGYELYPLSFDYGQRHQRELEAAKAVAQYY-------- 53

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             + E  ++ +  +G  + +  +  V    +D  +P T+VP RNI+FL +A      +G 
Sbjct: 54  -KVKEHRLIKIEHVGGSALTDASIQVPDYTEDGQIPVTYVPARNILFLSYALGYGEVMGA 112

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKL 183
             I IG+   DYSGYPDCR + ++A +  +++G +       + +  PL++L K ET +L
Sbjct: 113 EAIFIGISSVDYSGYPDCRPEFLQAFQKVVDVGTKAGVSGQTIAIKAPLLYLSKAETIQL 172

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           A + G        L  + +CY G           C +C +C LR KG+ E   K
Sbjct: 173 AAENGA------PLHHTTSCYRGGEK-------ACGTCDSCTLRLKGFAEAGIK 213


>gi|189462596|ref|ZP_03011381.1| hypothetical protein BACCOP_03286 [Bacteroides coprocola DSM 17136]
 gi|189430757|gb|EDU99741.1| hypothetical protein BACCOP_03286 [Bacteroides coprocola DSM 17136]
          Length = 219

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 91/228 (39%), Positives = 129/228 (56%), Gaps = 16/228 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +AL++FSGGQDS+TCL WA   F +V  LSF YGQ++  E+E    + +K       
Sbjct: 2   NKDAALVVFSGGQDSTTCLFWAKKHFKKVYALSFLYGQKHVKEVELAREIARKAEVDFHV 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              S           LG  S +  + ++  +  +   PNTFVPGRN+ FL  AA  A   
Sbjct: 62  MDVSFIGH-------LGKNSLTDTSIHMDEEKPEGTFPNTFVPGRNLFFLSIAAVYARER 114

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI +IV GV +TD+SGYPDCR   I+++   +NL ME    +HTPLMW+ K +TW LA +
Sbjct: 115 GINHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMEEQFVIHTPLMWIDKAQTWALADE 174

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           +G   +++L+  E+ TCY G        G GC  CPAC LR++G  ++
Sbjct: 175 LG---VLDLVRNETLTCYNGIP------GDGCGHCPACKLRREGLEKY 213


>gi|26987961|ref|NP_743386.1| exsB protein [Pseudomonas putida KT2440]
 gi|75489508|sp|Q9WWW8|QUEC_PSEPU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|81441873|sp|Q88NI3|QUEC_PSEPK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|24982674|gb|AAN66850.1|AE016313_9 exsB protein [Pseudomonas putida KT2440]
 gi|5514781|emb|CAB50783.1| hypothetical protein [Pseudomonas putida]
 gi|313497578|gb|ADR58944.1| ExsB [Pseudomonas putida BIRD-1]
          Length = 224

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 24/235 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A++L SGG DS+T ++ A        T+SFDYGQR++ EL     V + +  +  K 
Sbjct: 3   EKRAVILLSGGLDSATVVAMAKAEGYSCYTMSFDYGQRHRAELNAAARVARDLGVVEHKV 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    L L  +G  + +  + +V        +P T+VP RN +FL  A   A  L 
Sbjct: 63  IG-------LNLDGIGGSALTDSSIDVPEA-PGEGIPVTYVPARNTVFLSLALGWAEVLE 114

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWK 182
             +I IGV   DYSGYPDCR + + A E   NL  +         +  PL  + K +  +
Sbjct: 115 ARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAPLQNMSKAQIVQ 174

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                G      +    + +CY    D     G  C  C +C LR  G+     +
Sbjct: 175 AGMARG------VDYSLTVSCYQADDD-----GRACGKCDSCRLRADGFKAAGIE 218


>gi|327484036|gb|AEA78443.1| Queuosine Biosynthesis QueC ATPase [Vibrio cholerae LMA3894-4]
          Length = 231

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 97/229 (42%), Positives = 145/229 (63%), Gaps = 21/229 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  FD V  ++FDYGQR+K+E+E    + K++        
Sbjct: 2   KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQQLAKQLG------- 54

Query: 69  DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +    ++ +++L +++ SSLT++   V+ ++Q N LPN+FVPGRNI+FL  A   AY+
Sbjct: 55  --VTAHKVMDVSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQ 112

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G T ++ GVCETD+SGYPDCR + ++A+  A+  GM+  + + TPLMWL K ETW LA 
Sbjct: 113 IGATTVITGVCETDFSGYPDCRDEFVKAMNQALAKGMDLPLMIRTPLMWLNKAETWALAD 172

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            +G    ++L+  ++ TCY G        G GC  CPAC LRQ G   +
Sbjct: 173 QLGA---LDLVRHQTLTCYNG------LIGDGCGECPACGLRQAGLKAY 212


>gi|323497329|ref|ZP_08102347.1| queuosine biosynthesis protein QueC [Vibrio sinaloensis DSM 21326]
 gi|323317412|gb|EGA70405.1| queuosine biosynthesis protein QueC [Vibrio sinaloensis DSM 21326]
          Length = 235

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 95/230 (41%), Positives = 137/230 (59%), Gaps = 15/230 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++FSGGQDS+TCL  AL  +D V  ++FDYGQR+K+E+E    + K++     K  D
Sbjct: 3   KAVVVFSGGQDSTTCLVQALKEYDEVHAITFDYGQRHKLEIEVAQSLAKELGVKAHKVMD 62

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  L  L   S +     V+ ++QDN LPN+FVPGRNI+FL  A   AY++G  
Sbjct: 63  ------VGLLNELAISSLTRDDIPVSHELQDNGLPNSFVPGRNILFLTLAGIYAYQIGAQ 116

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++ GVCETD+SGYPDCR + +++I  ++ LGM+    + TPLMWL K ETW LA     
Sbjct: 117 AVITGVCETDFSGYPDCRDEFVKSINRSLVLGMDRQFEIETPLMWLNKAETWALADQ--- 173

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
            D + L+ E++ TCY G        G GC  CP+C LR+ G  ++    +
Sbjct: 174 YDALQLVREKTLTCYNGI------IGDGCGDCPSCELRKVGLSDYLSNRE 217


>gi|326404567|ref|YP_004284649.1| 7-cyano-7-deazaguanine synthase [Acidiphilium multivorum AIU301]
 gi|325051429|dbj|BAJ81767.1| 7-cyano-7-deazaguanine synthase [Acidiphilium multivorum AIU301]
          Length = 246

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 120/231 (51%), Positives = 165/231 (71%), Gaps = 2/231 (0%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+LFSGGQDS TCL+WALDR+DRVET+ F YGQR+ VELECR  +R  I  L P W+ +
Sbjct: 12  ALVLFSGGQDSGTCLAWALDRYDRVETIGFFYGQRHAVELECRAPLRAAIAGLRP-WRAT 70

Query: 71  LGEDHILPLA-ILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           LG D +L ++  L  +  +++T  + ++  +  LPNTFVPGRN++FL +AA LAYR GI 
Sbjct: 71  LGADTMLDISAALATLGATAMTAEIEIETTEAGLPNTFVPGRNLLFLTYAAALAYRRGIG 130

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G+CETDYSGYPDCR+ T++A++ A++LG++  VTV TPLM+  K  TW+LA ++GG
Sbjct: 131 TLVGGMCETDYSGYPDCRNTTMQAMQLALSLGLDRAVTVETPLMYRDKAATWELAAELGG 190

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
             LV  +   SH+CY G+R   ++WGYGC +CPAC LR  GW  ++    D
Sbjct: 191 AALVEALRTGSHSCYRGERATLHDWGYGCGTCPACELRAAGWQRWRAARAD 241


>gi|126651677|ref|ZP_01723880.1| possible aluminum resistance protein [Bacillus sp. B14905]
 gi|126591626|gb|EAZ85732.1| possible aluminum resistance protein [Bacillus sp. B14905]
          Length = 219

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 92/236 (38%), Positives = 142/236 (60%), Gaps = 21/236 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A+++FSGGQDS+TCL WA +RF  +E ++FDYGQR+++E++C   + +++      
Sbjct: 2   KQEKAIVVFSGGQDSTTCLFWAKERFAEIEAVTFDYGQRHRLEIDCAKLIAEELG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL--PNTFVPGRNIIFLVFAATLAY 124
                 + HIL +++L  ++ ++LT+         N   P+TFVPGRN++FL FA  LA 
Sbjct: 57  -----IKHHILDMSLLNQLAPNALTRQDIKVEDGKNGELPSTFVPGRNLLFLSFAGVLAS 111

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++G  +I+ GVCETD+SGYPDCR   I+++   +NL M+    + TPLMWL K +TW+LA
Sbjct: 112 QVGAKHIITGVCETDFSGYPDCRDVFIKSLNVTLNLSMDDSFVIDTPLMWLNKAQTWELA 171

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
              G    +  + E + TCY G          GC  CPAC LR+KG  ++    ++
Sbjct: 172 DQFGA---LEFVRERTLTCYNG------VIADGCGECPACKLRKKGLDDYLSNRKE 218


>gi|149194505|ref|ZP_01871601.1| ExsB [Caminibacter mediatlanticus TB-2]
 gi|149135249|gb|EDM23729.1| ExsB [Caminibacter mediatlanticus TB-2]
          Length = 221

 Score =  170 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 71/235 (30%), Positives = 107/235 (45%), Gaps = 28/235 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR-LCVRKKIVELMPKW 67
             A+++ SGG DS+T    A      +  L F+YGQR +         +   +       
Sbjct: 2   KKAVVILSGGMDSTTATFIAKKEGYEIIPLHFNYGQRTEKRELKAFNDICDYL------- 54

Query: 68  KDSLGEDHILPLAILGDISHSS---LTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              L   +++ +     I  S+       V        +P T+VP RN IFL  A  +A 
Sbjct: 55  --ELKNRYVIDIPFFKQIGASALVDENIEVPTDGIKPGIPITYVPFRNGIFLSIATAVAE 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG--MESHVTVHTPLMWLKKYETWK 182
           + G   I IGV E D SGYPDCR + I++IE AIN G   ++ + + TPL+ LKK +  K
Sbjct: 113 KEGAEAIYIGVVEEDSSGYPDCREEFIKSIEDAINKGTKPQTQIKIKTPLIHLKKEDIVK 172

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            A ++G      + LE + +CY  +          C  C +C LR KG+ +   K
Sbjct: 173 KAVEVG------VPLELTWSCYKEEDK-------ACGVCDSCRLRLKGFKKAGIK 214


>gi|121533884|ref|ZP_01665710.1| exsB protein [Thermosinus carboxydivorans Nor1]
 gi|121307395|gb|EAX48311.1| exsB protein [Thermosinus carboxydivorans Nor1]
          Length = 223

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 99/233 (42%), Positives = 136/233 (58%), Gaps = 21/233 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +AL++FSGGQDS+TCL WA+  F  VE ++FDYGQR++ E+EC   +          
Sbjct: 5   NKENALVVFSGGQDSTTCLFWAMKHFQEVEAVTFDYGQRHRAEIECAQKIA--------- 55

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKI--QDNNLPNTFVPGRNIIFLVFAATLAY 124
             +      IL L++L  ++ S+LT+        ++  LP TFVPGRN++FL FAA LA 
Sbjct: 56  -AEQGIAHTILDLSLLNQLAPSALTRADIEVKAGENGGLPTTFVPGRNLLFLSFAAVLAR 114

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           +  I +IV GVCETD+SGYPDCR   I+++   I L M+    +HTPLMWL K ETW+LA
Sbjct: 115 QKNIRHIVTGVCETDFSGYPDCRDAFIKSLNVTIQLAMDYQFVIHTPLMWLNKAETWELA 174

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
             +G   +++ I   + TCY G        G GC  CPAC LR  G   +  K
Sbjct: 175 DQLG---VLDYIRSNTLTCYHG------VIGDGCGQCPACRLRVAGLNAYLAK 218


>gi|255693847|ref|ZP_05417522.1| ExsB protein [Bacteroides finegoldii DSM 17565]
 gi|260620332|gb|EEX43203.1| ExsB protein [Bacteroides finegoldii DSM 17565]
          Length = 219

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 94/231 (40%), Positives = 138/231 (59%), Gaps = 22/231 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +AL++FSGGQDS+TCL WA   F +V  LSF YGQ+++ E+E    + +K       
Sbjct: 2   NREAALVVFSGGQDSTTCLFWAKRNFKKVYALSFLYGQKHQKEVEFAREIARKAE----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLA 123
                 E  ++ ++ +G + H+SLT    +  Q+   + +PNTFVPGRN+ FL  AA  A
Sbjct: 57  -----VEFDVMDVSFVGQLGHNSLTDTTMVMDQEKPADTVPNTFVPGRNLFFLSIAAVYA 111

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              GI ++V GV +TD+SGYPDCR   I+++   +NL M+    +HTPLMW+ K ETW L
Sbjct: 112 RERGINHLVTGVSQTDFSGYPDCRDSFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWAL 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           A ++G   ++ LI  E+ TCY G +      G GC  CPAC LR++G  ++
Sbjct: 172 ADELG---VLELIRNETLTCYNGVQ------GDGCGHCPACKLRREGLEKY 213


>gi|83313120|ref|YP_423384.1| PP-loop superfamily ATPase [Magnetospirillum magneticum AMB-1]
 gi|110816230|sp|Q2W000|QUEC_MAGSA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|82947961|dbj|BAE52825.1| Predicted PP-loop superfamily ATPase [Magnetospirillum magneticum
           AMB-1]
          Length = 227

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 75/235 (31%), Positives = 107/235 (45%), Gaps = 26/235 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+T L+ A         L+F YGQR+ VE+     V   +     +  
Sbjct: 2   KPAIVLLSGGLDSATVLAIAKAEGFAPAALTFRYGQRHAVEIRAAERVAAALGIRDHRIA 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYR 125
           D       + L + G  + +S       ++ +     +P T+VP RN I L FA   A  
Sbjct: 62  D-------IDLRVFGGSALTSDIAVPKGELDEAIPAGIPVTYVPARNTIMLSFALAFAEV 114

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYET 180
           LG  +I +GV   DYSGYPDCR D I+A E   NL  ++ V      +HTPL+ L K + 
Sbjct: 115 LGAADIFVGVNAVDYSGYPDCRPDYIKAFEAMANLATKAAVEGTRLTIHTPLIDLTKGQI 174

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            +   D+G      +    + TCY          G  C  C +C LR KG+ E  
Sbjct: 175 IRRGLDLG------VDYSITSTCYDP-----TPDGKACGHCDSCRLRLKGFAEAG 218


>gi|84387076|ref|ZP_00990099.1| predicted ATPase [Vibrio splendidus 12B01]
 gi|84378151|gb|EAP95011.1| predicted ATPase [Vibrio splendidus 12B01]
          Length = 231

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 93/226 (41%), Positives = 136/226 (60%), Gaps = 15/226 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  +D V  ++FDYGQR+++E+E    + K++     K  
Sbjct: 2   KKAVVVFSGGQDSTTCLVQALKEYDEVHAITFDYGQRHRLEIEVAESLSKELGVKAHKVM 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D      +  L  L   S +     V+ ++Q+N LPN+FVPGRNI+FL  A   AY++G 
Sbjct: 62  D------VTLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIGA 115

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++ GVCETD+SGYPDCR+D ++A+ +A+  GM+  + + TPLMWL K ETW LA    
Sbjct: 116 NTVITGVCETDFSGYPDCRNDFVKAMNSALVQGMDKPLDIKTPLMWLNKAETWALADQ-- 173

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
               + L+  ++ TCY G        G GC  CPAC LR+ G  ++
Sbjct: 174 -YSALELVRNKTLTCYNGIV------GDGCGDCPACELRKVGLNDY 212


>gi|312864994|ref|ZP_07725222.1| protein ExsB [Streptococcus downei F0415]
 gi|311099105|gb|EFQ57321.1| protein ExsB [Streptococcus downei F0415]
          Length = 217

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 100/231 (43%), Positives = 143/231 (61%), Gaps = 19/231 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WAL  ++ VE ++F YGQR+  E+E    + K +      
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWALKNYNHVEAVTFAYGQRHSHEVEVAKGIAKDLE----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 E  +L +++LG I++++LT ++ ++ Q+  +PNTFV GRN +FL FAA LA + 
Sbjct: 57  -----IEHQVLDMSLLGQITNNALTSDMEIEAQEGQVPNTFVDGRNHLFLSFAAILAKQK 111

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI++IV GVCETD+SGYPDCR   ++++   +NL M  +  + TPLMWL K ETW+LA  
Sbjct: 112 GISDIVTGVCETDFSGYPDCRDAFVKSLNVTLNLAMNYNFVIQTPLMWLDKAETWELADQ 171

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +G  D V     ++ TCY G        G GC  CPAC LRQ G   +  +
Sbjct: 172 LGAFDYVK---GKTLTCYNGI------MGAGCGECPACKLRQHGLDTYLAR 213


>gi|258649113|ref|ZP_05736582.1| ExsB protein [Prevotella tannerae ATCC 51259]
 gi|260850762|gb|EEX70631.1| ExsB protein [Prevotella tannerae ATCC 51259]
          Length = 226

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 88/228 (38%), Positives = 129/228 (56%), Gaps = 16/228 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               AL++FSGGQDS+TCL WA  +F  V  LSF YGQ++  E+E   C+ ++       
Sbjct: 5   NNERALVVFSGGQDSTTCLFWAKRQFKEVFALSFRYGQKHANEVELAECIAREAGVHFQS 64

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +  L       +  LG  S +  +  +  +  + + PNTFVPGRN+ FL  AA  A   
Sbjct: 65  LEAPL-------IGQLGRNSLTDASLEMDAEQPEGSFPNTFVPGRNLFFLSIAAVYAREH 117

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I ++V GV +TD+SGYPDCR   ++++   +NL M+    +HTPLMW  K  TW LA +
Sbjct: 118 DIRHLVTGVSQTDFSGYPDCRDSFMKSLNVTLNLAMDEQFVIHTPLMWRDKAATWALADE 177

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           +G   +++L+  E+ TCY G +      G GC  CPAC LR++G  E+
Sbjct: 178 LG---VLDLVRNETLTCYNGVK------GDGCGHCPACTLRRRGLEEY 216


>gi|313105863|ref|ZP_07792126.1| hypothetical protein PA39016_000110160 [Pseudomonas aeruginosa
           39016]
 gi|310878628|gb|EFQ37222.1| hypothetical protein PA39016_000110160 [Pseudomonas aeruginosa
           39016]
          Length = 224

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 65/235 (27%), Positives = 98/235 (41%), Gaps = 24/235 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T ++ A        T+SFDYGQR++ EL+    V +++  +  K
Sbjct: 2   NQKKAVILLSGGLDSATVVAMAKADGYACYTMSFDYGQRHRAELQAAERVARQLGVIEHK 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     L L  +G  + +  +  V            +VP RN +FL  A   A  L
Sbjct: 62  VIG-------LDLNGMGGSALTDESIAVPESPSAGIPVT-YVPARNTVFLSLALGWAEVL 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETW 181
              +I IGV   DYSGYPDCR + + A E   NL  +     +   +  PL +L K +  
Sbjct: 114 DARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGNGFRIQAPLQYLSKAQII 173

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           +     G      +    + +CY          G  C  C +C LR  G+     
Sbjct: 174 QAGVARG------VDYGLTVSCYQADE-----QGRACGKCDSCRLRADGFAAAGI 217


>gi|218288779|ref|ZP_03493042.1| exsB protein [Alicyclobacillus acidocaldarius LAA1]
 gi|218241137|gb|EED08313.1| exsB protein [Alicyclobacillus acidocaldarius LAA1]
          Length = 227

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 71/233 (30%), Positives = 111/233 (47%), Gaps = 24/233 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS+TC+  A      +  ++FDYGQR+++ELE    V         +   
Sbjct: 3   KAVVILSGGLDSATCMGIAHASGYELCPITFDYGQRHRIELESAKKVAAFYGVKDHRIVS 62

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 I  L  +G  + +  + +V  +     +P T+VPGRN++FL  AA+ A  +G  
Sbjct: 63  ------IDFLRQIGGSALTDESIDVPTEGVSREIPVTYVPGRNLLFLAIAASYAEVIGAE 116

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKLA 184
            I IGV   DYSGYPDCR + I  +E  + +G +       + + TPL+   K E  +  
Sbjct: 117 AIYIGVNALDYSGYPDCRPEFIEGVEHVLRIGTKAGVEGRPIRIETPLLHWTKGEIVRKG 176

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            ++G      +  E + +CY G           C  C +C LR KG+ E   K
Sbjct: 177 LELG------VPYELTTSCYQGGD-------VACGECDSCRLRLKGFAEAGAK 216


>gi|224026023|ref|ZP_03644389.1| hypothetical protein BACCOPRO_02776 [Bacteroides coprophilus DSM
           18228]
 gi|224019259|gb|EEF77257.1| hypothetical protein BACCOPRO_02776 [Bacteroides coprophilus DSM
           18228]
          Length = 222

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 90/228 (39%), Positives = 131/228 (57%), Gaps = 16/228 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +AL++FSGGQDS+TCL WA   F +V  LSF YGQ++  E+E    + +K       
Sbjct: 2   NNETALVVFSGGQDSTTCLFWAKKHFKKVYALSFIYGQKHVKEVELAREIARKADVEFAV 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              S           LG  S +  + ++  +   ++ PNTFVPGRN+ FL  AA  A   
Sbjct: 62  MDVSFIGH-------LGKNSLTDTSIHMDEEKPADSFPNTFVPGRNLFFLSIAAVHAREK 114

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI+++V GV +TD+SGYPDCR   I+++   +NL M+    +HTPLMW+ K +TW LA +
Sbjct: 115 GISHLVTGVSQTDFSGYPDCRDSFIKSLNVTLNLAMDEQFVIHTPLMWIDKAQTWALADE 174

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           +G   +++LI  E+ TCY G        G GC  CPAC LR++G  ++
Sbjct: 175 LG---VLDLIRHETLTCYNGIP------GDGCGHCPACKLRREGLEKY 213


>gi|158520513|ref|YP_001528383.1| exsB protein [Desulfococcus oleovorans Hxd3]
 gi|158509339|gb|ABW66306.1| exsB protein [Desulfococcus oleovorans Hxd3]
          Length = 228

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 70/245 (28%), Positives = 111/245 (45%), Gaps = 28/245 (11%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +   +  A++L SGG DS+T ++ A+ +   V +L+FDYGQR++ EL     V + +   
Sbjct: 1   MTADSRRAVVLSSGGIDSTTAMAMAVSQGFSVFSLTFDYGQRHRHELSAARAVARHLNAE 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                ++           +G  + ++          +N +P T+VP RN IFL +A   A
Sbjct: 61  KHLVLET-------DFRKIGGSALTADIPVPGTGPVENTIPVTYVPARNTIFLAYALAWA 113

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM------ESHVTVHTPLMWLKK 177
             L   +I IGV   DYSGYPDCR + I A     NLG            VHTPL+ + K
Sbjct: 114 ETLDAADIFIGVNAVDYSGYPDCRPEYIEAFARVANLGSKAGVEGRITFAVHTPLIHMTK 173

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK-- 235
            E  +    +G      +    + +CY          G  C  C +C +R+KG+++    
Sbjct: 174 AEIIRTGAALG------VDYSITSSCYDP-----SPEGLACGLCDSCRIRKKGFVDAGLP 222

Query: 236 --EKY 238
              +Y
Sbjct: 223 DPTRY 227


>gi|307709656|ref|ZP_07646108.1| queuosine biosynthesis protein queC [Streptococcus mitis SK564]
 gi|307619554|gb|EFN98678.1| queuosine biosynthesis protein queC [Streptococcus mitis SK564]
          Length = 217

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 99/225 (44%), Positives = 141/225 (62%), Gaps = 19/225 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WA + ++ VE ++F YGQR+ +E++    + K+       
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWAKEHYETVEAVTFAYGQRHHLEIQVAREIAKEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL +++LG I+ ++LT ++ ++ ++  +PNTFV GRN +FL FAA LA + 
Sbjct: 57  -----IRHHILDMSLLGQITENALTSDMEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQR 111

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI +IV GVCETD+SGYPDCR   ++++   +NL M+    + TPLMWL K ETW+LA  
Sbjct: 112 GIKDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWELADQ 171

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
           +G  D V    E + TCY G        G GC  CPAC+LRQ G 
Sbjct: 172 LGAFDYVR---ENTLTCYNGI------IGSGCGDCPACHLRQHGL 207


>gi|152990536|ref|YP_001356258.1| ExsB family transcriptional regulator [Nitratiruptor sp. SB155-2]
 gi|189038929|sp|A6Q342|QUEC_NITSB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|151422397|dbj|BAF69901.1| transcriptional regulator, ExsB family [Nitratiruptor sp. SB155-2]
          Length = 220

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 69/233 (29%), Positives = 112/233 (48%), Gaps = 27/233 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DSS     A      +  + F+YGQR +         +K++        +
Sbjct: 2   KAVVILSGGMDSSITAYMAKKDGYEIIAVHFNYGQRTE---------QKELEAFRAIAGE 52

Query: 70  SLGEDHILPLAILGDISHSS---LTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              + + + L     I  S+       +  +  +  +P T+VP RN IFL  AA +A + 
Sbjct: 53  LNAKTYEIDLPFFEQIGASALIDTNIAIPKQGIEPGIPVTYVPFRNGIFLSVAAAIAEKE 112

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKLA 184
           G  +I IGV E D SGYPDCR D I+ +E+AIN G +    + + TPL+ L+K +  +L 
Sbjct: 113 GADSIYIGVVEEDSSGYPDCREDFIQKMESAINAGTKPETDIKIKTPLIHLRKEDIVQLG 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
             +G      + LE++ +CY  + +        C  C +C LR KG+ +   K
Sbjct: 173 LSLG------VPLEKTWSCYESEDE-------ACGECDSCRLRLKGFEKAGAK 212


>gi|306824723|ref|ZP_07458067.1| transcription regulator ExsB [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432934|gb|EFM35906.1| transcription regulator ExsB [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 217

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 100/225 (44%), Positives = 142/225 (63%), Gaps = 19/225 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WA + ++ VE ++F YGQR+ +E++    + K+       
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWAKEHYETVEAVTFAYGQRHHLEIQVAREIAKEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL +++LG I+ ++LT ++ ++ ++  +PNTFV GRN +FL FAA LA + 
Sbjct: 57  -----IRHHILDMSLLGQITENALTSDLEIEQKEREVPNTFVDGRNHLFLSFAAVLAKQR 111

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI +IV GVCETD+SGYPDCR   ++++   +NL M+    + TPLMWL K ETWKLA  
Sbjct: 112 GIKDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWKLADQ 171

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
           +G  D V    E++ TCY G        G GC  CPAC+LRQ G 
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGSGCGDCPACHLRQHGL 207


>gi|322375720|ref|ZP_08050232.1| ExsB protein [Streptococcus sp. C300]
 gi|321279428|gb|EFX56469.1| ExsB protein [Streptococcus sp. C300]
          Length = 217

 Score =  169 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 100/225 (44%), Positives = 143/225 (63%), Gaps = 19/225 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WA + ++ VE ++F YGQR+ +E++    + K+       
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWAKEHYETVEAVTFAYGQRHHLEIQVAEEIAKEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL +++LG I+ ++LT ++ ++ ++  +PNTFV GRN +FL FAA LA +L
Sbjct: 57  -----IRHHILDMSLLGQITENALTSDMEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQL 111

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI +IV GVCETD+SGYPDCR   ++++   +NL M+    + TPLMWL K ETW+LA  
Sbjct: 112 GIKDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWELADQ 171

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
           +G  D V    E++ TCY G        G GC  CPAC+LRQ G 
Sbjct: 172 LGSFDYVR---EKTLTCYNGI------IGSGCGDCPACHLRQHGL 207


>gi|89894801|ref|YP_518288.1| hypothetical protein DSY2055 [Desulfitobacterium hafniense Y51]
 gi|89334249|dbj|BAE83844.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 243

 Score =  169 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 74/234 (31%), Positives = 116/234 (49%), Gaps = 27/234 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+TC+S A      +  LSFDYGQR++ ELE    V +          
Sbjct: 12  KKAVVLLSGGLDSTTCMSVAHKAGYELYPLSFDYGQRHQRELEAAKAVAQYY-------- 63

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             + E  ++ +  +G  + +  +  V    +D  +P T+VP RNI+FL +A      +G 
Sbjct: 64  -KVKEHRLIKIEHVGGSALTDASIQVPDYTEDGQIPVTYVPARNILFLSYALGYGEVMGA 122

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKL 183
             I IG+   DYSGYPDCR + ++A +  +++G +       + +  PL++L K ET +L
Sbjct: 123 EAIFIGISSVDYSGYPDCRPEFLQAFQKVVDVGTKAGVSGQTIAIKAPLLYLSKAETIQL 182

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           A + G        L  + +CY G           C +C +C LR KG+ E   K
Sbjct: 183 AAENGA------PLHHTTSCYRGGEK-------ACGTCDSCTLRLKGFAEAGIK 223


>gi|325981314|ref|YP_004293716.1| exsB protein [Nitrosomonas sp. AL212]
 gi|325530833|gb|ADZ25554.1| exsB protein [Nitrosomonas sp. AL212]
          Length = 225

 Score =  169 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 70/241 (29%), Positives = 104/241 (43%), Gaps = 27/241 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+T L+ A  +  R   LS DYGQRN  EL     + + +     +  
Sbjct: 2   KKAIVLLSGGLDSATTLAIAHGQGFRCYALSIDYGQRNFAELNAAQKIAQSLDSHKHQI- 60

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   + L   G  + +  +  V    ++  +P T+VP RN I L  A   A  L  
Sbjct: 61  ------IKIDLTAFGGSALTDQSIKVPTSGENPGIPVTYVPARNTIMLSLALAWAETLDC 114

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
            +I  GV   DYSGYPDCR + I+A     NL  ++ V      +HTPLM L K +  + 
Sbjct: 115 QDIFTGVNAVDYSGYPDCRAEYIQAFGIMANLATKASVEGKQLTIHTPLMLLSKQQIIQT 174

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF----KEKYQ 239
              +G      +    + +CY          G  C  C +C +R+ G+          Y+
Sbjct: 175 GLALG------VDYSLTVSCYQADEA-----GQACGVCDSCRIRKAGFKAANIPDPTAYK 223

Query: 240 D 240
           D
Sbjct: 224 D 224


>gi|322392674|ref|ZP_08066134.1| transcription regulator ExsB [Streptococcus peroris ATCC 700780]
 gi|321144666|gb|EFX40067.1| transcription regulator ExsB [Streptococcus peroris ATCC 700780]
          Length = 217

 Score =  169 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 101/226 (44%), Positives = 143/226 (63%), Gaps = 19/226 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WA   ++RVE ++F YGQR+ +E++    + ++       
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWAKQHYERVEAVTFAYGQRHHLEIQVAKEIAEEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL +++LG I+ ++LT ++ ++ ++  +PNTFV GRN +FL FAA LA + 
Sbjct: 57  -----IHHHILDMSLLGQITENALTSDLEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQR 111

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GIT+IV GVCETD+SGYPDCR   ++++   +NL M+    + TPLMWL K ETW LA  
Sbjct: 112 GITDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWALADQ 171

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
           +G  D V    E++ TCY G R      G GC  CPAC+LRQ G  
Sbjct: 172 LGAFDYVR---EKTLTCYNGIR------GAGCGDCPACHLRQHGLE 208


>gi|289167420|ref|YP_003445689.1| queuosine biosynthesis protein queC [Streptococcus mitis B6]
 gi|288906987|emb|CBJ21821.1| queuosine biosynthesis protein queC [Streptococcus mitis B6]
          Length = 217

 Score =  169 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 101/225 (44%), Positives = 143/225 (63%), Gaps = 19/225 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WA + ++ VE ++F YGQR+ +E++    + K+       
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWAKEHYETVEAVTFAYGQRHHLEIQVAQEIAKEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL +++LG I+ ++LT ++ ++ ++  +PNTFV GRN +FL FAA LA + 
Sbjct: 57  -----IRHHILDMSLLGQITENALTSDLEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQQ 111

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GIT+IV GVCETD+SGYPDCR   ++++   +NL ME    + TPLMWL K ETW+LA  
Sbjct: 112 GITDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMEYDFVIQTPLMWLDKAETWELADQ 171

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
           +G  D V    E++ TCY G        G GC  CPAC+LRQ G 
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGSGCGDCPACHLRQHGL 207


>gi|307707499|ref|ZP_07643981.1| ExsB protein [Streptococcus mitis NCTC 12261]
 gi|307616451|gb|EFN95642.1| ExsB protein [Streptococcus mitis NCTC 12261]
          Length = 217

 Score =  169 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 99/225 (44%), Positives = 141/225 (62%), Gaps = 19/225 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WA   ++ VE ++F YGQR+ +E++    + K+       
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWAKKHYETVEAVTFAYGQRHHLEIQVAREIAKEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL +++LG I+ ++LT ++ ++ ++  +PNTFV GRN +FL FAA LA + 
Sbjct: 57  -----IRHHILDMSLLGQITENALTSDMEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQR 111

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI +IV GVCETD+SGYPDCR   ++++   +NL M+    + TPLMWL K ETW+LA  
Sbjct: 112 GIKDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWELADQ 171

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
           +G  D V    E++ TCY G        G GC  CPAC+LRQ G 
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGSGCGDCPACHLRQHGL 207


>gi|23097767|ref|NP_691233.1| transcriptional regulator [Oceanobacillus iheyensis HTE831]
 gi|81747126|sp|Q8ETE9|QUEC_OCEIH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|22775991|dbj|BAC12268.1| transcriptional regulator (exsB family) [Oceanobacillus iheyensis
           HTE831]
          Length = 221

 Score =  169 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 77/233 (33%), Positives = 113/233 (48%), Gaps = 27/233 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++ SGG DS+TC+    +    +  +SF YGQR+  E+E    V            
Sbjct: 4   KKAVVILSGGLDSTTCMGVGKEAGYELYPISFHYGQRHDREIENAKKVASYF-------- 55

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYR 125
            ++ E  +  L  L +I  SSLT       Q+    ++PNT+VPGRN IFL  AA+ A  
Sbjct: 56  -NVTEHKVFSLEFLKEIGGSSLTDQSMEVSQEGVGEDVPNTYVPGRNTIFLSIAASYAEA 114

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWKL 183
           +G   I +GV   DYSGYPDCR + I A++  I  G      +T+  PL+ L K +T KL
Sbjct: 115 IGAEKIYVGVSAVDYSGYPDCRPEFIEAMQQTIYQGTNANPAMTIEAPLIDLSKGDTVKL 174

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
              +      N+    + +CYLG  +        C  C +C LR +G+ E   
Sbjct: 175 GMKL------NVPYHLTTSCYLGGEE-------ACGECDSCRLRLQGFEEAGA 214


>gi|224539122|ref|ZP_03679661.1| hypothetical protein BACCELL_04024 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519263|gb|EEF88368.1| hypothetical protein BACCELL_04024 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 219

 Score =  169 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 94/231 (40%), Positives = 132/231 (57%), Gaps = 16/231 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               AL++FSGGQDS+TCL WA   F RV  LSF YGQ+++ E+E    + +K       
Sbjct: 2   NKEVALVVFSGGQDSTTCLFWAKREFKRVVALSFLYGQKHEKEVELAREIARKADVEFEA 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              S        +  LG  S +  T  +  +    + PNTFVPGRN+ FL  AA  A   
Sbjct: 62  MDVSF-------IGKLGHNSLTDTTMLMDQEKPAGSYPNTFVPGRNLFFLSIAAVYAREH 114

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI +IV GV +TD+SGYPDCR   I+++   +NL M+    +HTPLMW+ K ETW LA +
Sbjct: 115 GINHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWGLADE 174

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +G   +++LI  E+ TCY G +      G GC  CPAC LR++G  ++ ++
Sbjct: 175 LG---VLDLIRNETLTCYNGIQ------GDGCGHCPACKLRREGLEKYLKQ 216


>gi|148546498|ref|YP_001266600.1| exsB protein [Pseudomonas putida F1]
 gi|189038936|sp|A5VZV6|QUEC_PSEP1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|148510556|gb|ABQ77416.1| exsB protein [Pseudomonas putida F1]
          Length = 224

 Score =  169 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 67/235 (28%), Positives = 99/235 (42%), Gaps = 24/235 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A++L SGG DS+T ++ A        T+SFDYGQR++ EL     V   +  +  K 
Sbjct: 3   EKRAVILLSGGLDSATVVAMAKAEGYSCYTMSFDYGQRHRAELNAAARVAHDLGVVEHKV 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    L L  +G  + +  + +V        +P T+VP RN +FL  A   A  L 
Sbjct: 63  IG-------LNLDGIGGSALTDSSIDVPEA-PGEGIPVTYVPARNTVFLSLALGWAEVLE 114

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWK 182
             +I IGV   DYSGYPDCR + + A E   NL  +         +  PL  + K +  +
Sbjct: 115 ARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAPLQNMSKAQIVQ 174

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                G      +    + +CY    D     G  C  C +C LR  G+     +
Sbjct: 175 AGMARG------VDYSLTVSCYQADDD-----GRACGKCDSCRLRADGFKAAGIE 218


>gi|331265895|ref|YP_004325525.1| ExsB family protein; Adenosine nucleotide binding superfamily of
           proteins [Streptococcus oralis Uo5]
 gi|326682567|emb|CBZ00184.1| ExsB family protein; Adenosine nucleotide binding superfamily of
           proteins [Streptococcus oralis Uo5]
          Length = 217

 Score =  169 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 100/225 (44%), Positives = 142/225 (63%), Gaps = 19/225 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WA + +  VE ++F YGQR+ +E++    + K+       
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWAKEHYKTVEAVTFAYGQRHHLEIQVAREIAKEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL +++LG I+ ++LT ++ ++ ++  +PNTFV GRN +FL FAA LA +L
Sbjct: 57  -----IRHHILDMSLLGQITENALTSDMEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQL 111

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI +IV GVCETD+SGYPDCR   ++++   +NL M+    + TPLMWL K ETW+LA  
Sbjct: 112 GIKDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWELADQ 171

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
           +G  D V    E++ TCY G        G GC  CPAC+LRQ G 
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGSGCGDCPACHLRQHGL 207


>gi|167761944|ref|ZP_02434071.1| hypothetical protein BACSTE_00288 [Bacteroides stercoris ATCC
           43183]
 gi|167700176|gb|EDS16755.1| hypothetical protein BACSTE_00288 [Bacteroides stercoris ATCC
           43183]
          Length = 217

 Score =  169 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 94/231 (40%), Positives = 139/231 (60%), Gaps = 22/231 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +AL++FSGGQDS+TCL WA   F +V  LSF YGQ+++ E+E    + +K       
Sbjct: 2   NKEAALVVFSGGQDSTTCLFWAKREFRKVYALSFLYGQKHQKEVELAREIARKAE----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLA 123
                 E  ++ ++ +G + H+SLT    +  ++   +++PNTFVPGRN+ FL  AA  A
Sbjct: 57  -----VEFEVMDVSFIGKLGHNSLTDPDMVMDREKPADSVPNTFVPGRNLFFLSIAAVYA 111

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              GI +IV GV +TD+SGYPDCR   I+++   +NL M+    +HTPLMW+ K ETW L
Sbjct: 112 REKGINHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVLHTPLMWIDKAETWAL 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           A ++G   +++LI  E+ TCY G        G GC  CPAC LR++G  ++
Sbjct: 172 ADELG---VLDLIRHETLTCYNGIP------GDGCGHCPACKLRREGLEKY 213


>gi|189467207|ref|ZP_03015992.1| hypothetical protein BACINT_03591 [Bacteroides intestinalis DSM
           17393]
 gi|189435471|gb|EDV04456.1| hypothetical protein BACINT_03591 [Bacteroides intestinalis DSM
           17393]
          Length = 218

 Score =  169 bits (427), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 94/230 (40%), Positives = 140/230 (60%), Gaps = 22/230 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL++FSGGQDS+TCL WA  +F  V  LSF YGQ+++ E+E    + +          D+
Sbjct: 6   ALVVFSGGQDSTTCLFWAKRKFREVVALSFLYGQKHEKEVELAREIAR----------DA 55

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +  ++ ++ +G + H+SLT N  +  Q+   ++ PNTFVPGRN+ FL  AA  A   G
Sbjct: 56  DVKFEVMDVSFIGKLGHNSLTDNTMVMDQEKPTDSFPNTFVPGRNLFFLSIAAVYAREHG 115

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I +IV GV +TD+SGYPDCR   I+++   +NL M+    +HTPLMW+ K ETW LA ++
Sbjct: 116 INHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWALADEL 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           G   +++LI  ++ TCY G        G GC  CPAC LR++G  ++  +
Sbjct: 176 G---VLDLIRNKTLTCYNGIP------GDGCGHCPACKLRREGLEKYLSR 216


>gi|119774961|ref|YP_927701.1| ExsB protein [Shewanella amazonensis SB2B]
 gi|167016452|sp|A1S6M5|QUEC_SHEAM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|119767461|gb|ABM00032.1| ExsB protein [Shewanella amazonensis SB2B]
          Length = 230

 Score =  169 bits (427), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 103/228 (45%), Positives = 148/228 (64%), Gaps = 21/228 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++FSGGQDS+TCL  AL +FD V  ++FDYGQR+  E+E    +  ++         
Sbjct: 3   KAVVVFSGGQDSTTCLVQALSQFDEVHAITFDYGQRHSEEIEVAKALTSELG-------- 54

Query: 70  SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 I+ +++LG+++ S+LT++   V+ ++ DN LPNTFVPGRNI+FL  A   AY+L
Sbjct: 55  -CASHKIMDVSLLGELAISALTRDAIPVSHELMDNGLPNTFVPGRNILFLTLAGIYAYQL 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   ++ GVCETD+SGYPDCR+D I+A+E A+NLGM+  + +HTPLMWL K ETW LA  
Sbjct: 114 GADTVITGVCETDFSGYPDCRNDFIKAMEQALNLGMDKQLNIHTPLMWLNKAETWALADR 173

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            G    + L+   + TCY G R      G GC  CPAC+LR++G  ++
Sbjct: 174 YG---KLELVRNHTLTCYNGIR------GDGCGDCPACHLRKRGLEDY 212


>gi|325274587|ref|ZP_08140643.1| exsB protein [Pseudomonas sp. TJI-51]
 gi|324100229|gb|EGB98019.1| exsB protein [Pseudomonas sp. TJI-51]
          Length = 224

 Score =  169 bits (427), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 67/240 (27%), Positives = 101/240 (42%), Gaps = 28/240 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A++L SGG DS+T ++ A        T+SFDYGQR++ EL     V + +  +  K 
Sbjct: 3   EKRAVILLSGGLDSATVVAMAKADGYSCYTMSFDYGQRHRAELNAAARVARDLGVVEHKV 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    L L  +G  + +  + +V        +P T+VP RN +FL  A   A  L 
Sbjct: 63  IG-------LNLDGIGGSALTDSSIDVPET-PGEGIPVTYVPARNTVFLSLALGWAEVLE 114

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWK 182
             +I IGV   DYSGYPDCR + + A E   NL  +         +  PL  + K +  +
Sbjct: 115 ARDIFIGVNAVDYSGYPDCRPEFVEAFERMANLATKAGVEGQGFRIQAPLQNMSKAQIVQ 174

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKY 238
                G      +    + +CY    +     G  C  C +C LR  G+         +Y
Sbjct: 175 AGMARG------VDYSLTVSCYQADDE-----GRACGKCDSCRLRADGFRAAGVDDPTRY 223


>gi|254428689|ref|ZP_05042396.1| exsB protein [Alcanivorax sp. DG881]
 gi|196194858|gb|EDX89817.1| exsB protein [Alcanivorax sp. DG881]
          Length = 222

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 73/240 (30%), Positives = 110/240 (45%), Gaps = 28/240 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+TCL+ A D+     T++FDYGQR + EL+  + V   +  L  +  
Sbjct: 2   KKAVVLLSGGLDSATCLAIARDQGYECHTIAFDYGQRTRSELDAAVQVSGALGALSHRVI 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +       L +  +G  + +  + +V        +P T+VP RN +FL  A  LA  +  
Sbjct: 62  E-------LGMGNIGGSALTDHSIDVPEDG-GEGIPVTYVPARNTVFLSLALGLAEVVDA 113

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKL 183
             I IGV   DYSGYPDCR   I A ++  NL  +       + + TPLM L K +  + 
Sbjct: 114 QAIFIGVNAVDYSGYPDCRPAFIEAFQSMANLATKAGVEGRPMQIETPLMHLSKAQIIQQ 173

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF----KEKYQ 239
              +G      L    + +CY          G  C  C +C LR +G+ +        YQ
Sbjct: 174 GVALG------LDYGLTVSCYQADE-----NGNACGKCDSCRLRSQGFEDALVKDPTNYQ 222


>gi|319401215|gb|EFV89430.1| queuosine biosynthesis protein queC [Staphylococcus epidermidis
           FRI909]
          Length = 223

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 92/237 (38%), Positives = 142/237 (59%), Gaps = 20/237 (8%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+        AL++FSGGQDS+TCL +A   F  VE ++F+YGQR+  E+E    + K  
Sbjct: 1   MSQNDLNKEKALVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDTEIEVAKKIAK-- 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                   +   + HIL +++L  ++ ++LT   + ++  D+ +PNTFVP RN++FL FA
Sbjct: 59  --------EQNLKHHILDMSLLSQLTPNALTQHELQIEDNDDGIPNTFVPARNLLFLSFA 110

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
             LAY++   +I+ GVCETD+SGYPDCR + I+++   ++L M+    +HTPLMWL K +
Sbjct: 111 GALAYQIHAKHIITGVCETDFSGYPDCRDNFIKSMNVTLSLSMDKDFVIHTPLMWLDKAQ 170

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           TW L+  +G   +++ I   + TCY G        G GC  CPAC+LR +G   + E
Sbjct: 171 TWALSDKLG---VLDYIRHNTLTCYNGI------IGDGCGECPACHLRARGLKHYLE 218


>gi|172058908|ref|YP_001815368.1| exsB protein [Exiguobacterium sibiricum 255-15]
 gi|254764347|sp|B1YFM6|QUEC_EXIS2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|171991429|gb|ACB62351.1| exsB protein [Exiguobacterium sibiricum 255-15]
          Length = 218

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 99/234 (42%), Positives = 138/234 (58%), Gaps = 20/234 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   AL++FSGGQDS+TCL  AL  +  VE ++F+YGQR+  EL+    +  ++      
Sbjct: 2   KNERALVVFSGGQDSTTCLFQALADYSEVEVVTFNYGQRHAAELDVAREITSELG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 + H L L++L  ++ +SLT +   +   ++ LP+TFV GRN +FL FAA LA  
Sbjct: 57  -----VKHHELDLSLLSQLTSNSLTDHSQSITTNEDGLPSTFVDGRNHLFLSFAAVLAKG 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            GI +I+ GVCETD+SGYPDCR   I+++   +NL M+    +HTPLMWL K ETW LA 
Sbjct: 112 RGIRHIITGVCETDFSGYPDCRDSFIKSLNVTLNLAMDYPFVIHTPLMWLDKKETWALAD 171

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
            +G  D V    + + TCY G        G GC  CPAC LR+KG   + E+ Q
Sbjct: 172 SLGAFDFVR---KRTLTCYNGI------IGDGCGDCPACELRKKGLDAYIEEVQ 216


>gi|320156524|ref|YP_004188903.1| queuosine Biosynthesis QueC ATPase [Vibrio vulnificus MO6-24/O]
 gi|319931836|gb|ADV86700.1| queuosine Biosynthesis QueC ATPase [Vibrio vulnificus MO6-24/O]
          Length = 231

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 95/231 (41%), Positives = 141/231 (61%), Gaps = 15/231 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL+ FD V  ++FDYGQR+++E+E    + K++     K  
Sbjct: 2   NKAVVVFSGGQDSTTCLVKALNEFDEVHAITFDYGQRHRLEIEVAQNLAKELGVAAHKVM 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D      +  L  L   S +     V+ ++Q+N LPN+FVPGRNI+FL  A   AY++G 
Sbjct: 62  D------VTLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIGA 115

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I+ GVCETD+SGYPDCR D ++A+ +A+  GM+  + + TPLMWL K ETW LA    
Sbjct: 116 QTIITGVCETDFSGYPDCRDDFVKAMNSALVKGMDKPLVIQTPLMWLNKAETWALADQ-- 173

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
             + + L+ E++ TCY G        G GC  CP+C+LR+ G  ++ +  +
Sbjct: 174 -NNALQLVREKTLTCYNGI------IGDGCGDCPSCHLRKVGLNDYLDNRE 217


>gi|302879777|ref|YP_003848341.1| exsB protein [Gallionella capsiferriformans ES-2]
 gi|302582566|gb|ADL56577.1| exsB protein [Gallionella capsiferriformans ES-2]
          Length = 225

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 70/240 (29%), Positives = 101/240 (42%), Gaps = 28/240 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            +A++L SGG DS+T L+ A  +      LS DYGQR+  EL     V + +     +  
Sbjct: 2   KNAVVLLSGGLDSATVLAMARAQGYTCYALSVDYGQRHHSELAAAQRVAETLGAREHRVV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +       + L   G  + +     V        +P T+VP RN I L  A   A  L  
Sbjct: 62  N-------IDLTGFGGSALTDNNIAVPE-HASAGIPLTYVPARNTIMLSLALAWAEVLRA 113

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
            +I IGV   DYSGYPDCR   I A E   NL  ++ V      +H PL+ L K +  K 
Sbjct: 114 QDIFIGVNAVDYSGYPDCRPAYIEAFERMANLATQAAVEGHPLTLHAPLLHLSKADIIKS 173

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQ 239
                   L+++    + +CY          G  C  C +C LR  G+         +Y+
Sbjct: 174 GS------LLSVDYAATVSCYQADD-----LGRACGVCDSCRLRSAGFAAAGVSDPTRYR 222


>gi|330011622|ref|ZP_08307127.1| protein ExsB [Klebsiella sp. MS 92-3]
 gi|328534106|gb|EGF60743.1| protein ExsB [Klebsiella sp. MS 92-3]
          Length = 233

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 91/230 (39%), Positives = 135/230 (58%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  K+  +     
Sbjct: 2   KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGAVA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       +     +PNTFVPGRNI+FL   A  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDNIPVPDYQPDAEGIPNTFVPGRNILFLTLTAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    I+ GVCETD+SGYPDCR + ++A+  A++LGM   +   TPLMWL K ETW LA
Sbjct: 113 QVKAEAIITGVCETDFSGYPDCRDEFVKALHNAVSLGMAKDIRFETPLMWLNKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+  E+ TCY G +      G GC  C AC LR  G  ++
Sbjct: 173 DYWGQ---LDLVRRETLTCYNGIK------GDGCGQCAACNLRANGLNQY 213


>gi|323491405|ref|ZP_08096590.1| queuosine biosynthesis protein QueC [Vibrio brasiliensis LMG 20546]
 gi|323314531|gb|EGA67610.1| queuosine biosynthesis protein QueC [Vibrio brasiliensis LMG 20546]
          Length = 228

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 95/231 (41%), Positives = 140/231 (60%), Gaps = 15/231 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR+K+E+E    + K++     K  
Sbjct: 2   NKAVVVFSGGQDSTTCLVQALKQYDEVHAITFDYGQRHKLEIEVAQSLAKELGVKAHKVM 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D      +  L  L   S +     V+  +Q+N LPN+FVPGRNI+FL  A   AY++G 
Sbjct: 62  D------VSLLNELAISSLTRDDIPVSHDLQENGLPNSFVPGRNILFLTLAGIYAYQIGA 115

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++ GVCETD+SGYPDCR+D ++A+ +A+  GM+  + + TPLMWL K ETW LA    
Sbjct: 116 KTVITGVCETDFSGYPDCRNDFVKAMNSALEQGMDYQLEIATPLMWLNKAETWALADQ-- 173

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
             D + L+ E++ TCY G        G GC  CP+C LR+ G  ++ +  +
Sbjct: 174 -YDALQLVREKTLTCYNG------VIGDGCGDCPSCELRKVGLNDYLDNRE 217


>gi|329962178|ref|ZP_08300185.1| protein ExsB [Bacteroides fluxus YIT 12057]
 gi|328530465|gb|EGF57339.1| protein ExsB [Bacteroides fluxus YIT 12057]
          Length = 219

 Score =  168 bits (426), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 94/231 (40%), Positives = 136/231 (58%), Gaps = 22/231 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +AL++FSGGQDS+TCL WA   F +V  LSF YGQ+++ E+E    + +K       
Sbjct: 2   NRDTALVVFSGGQDSTTCLFWAKREFKKVYALSFLYGQKHRQEVELAREIARKAG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                 E  ++ ++ +G + H+SLT     +  +   ++ PNTFVPGRN+ FL  AA  A
Sbjct: 57  -----VEFEVMDVSFIGRLGHNSLTDAGMEMDREKPADSFPNTFVPGRNLFFLSIAAVYA 111

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              GI +IV GV +TD+SGYPDCR   I+++   +NL M+    +HTPLMW+ K ETW L
Sbjct: 112 RERGINHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVLHTPLMWIDKAETWAL 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           A ++G   ++ LI  E+ TCY G        G GC  CPAC LR++G  ++
Sbjct: 172 ADELG---VLELIRHETLTCYNGIP------GDGCGHCPACTLRREGLEKY 213


>gi|282898901|ref|ZP_06306885.1| ExsB [Cylindrospermopsis raciborskii CS-505]
 gi|281196212|gb|EFA71125.1| ExsB [Cylindrospermopsis raciborskii CS-505]
          Length = 222

 Score =  168 bits (426), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 67/237 (28%), Positives = 101/237 (42%), Gaps = 29/237 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DSST L  A         +SFDY QR++ EL+  + + + +  +  +   
Sbjct: 2   KAVILLSGGLDSSTVLYQARADGYECYAISFDYHQRHRRELQSAMSIAQSLGVVEHQ--- 58

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMK----IQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    L   G  + +  +  V           ++P T+VP RN IFL F    A  
Sbjct: 59  ----QVTFDLRSWGGSALTDNSIPVPHNRPLDQMSESIPITYVPARNTIFLSFGLAYAEA 114

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKKYET 180
           +    + IGV   DYSGYPDCR D I A++    LG +       + +  PL+ L K + 
Sbjct: 115 IRAERVYIGVNALDYSGYPDCRPDYIHAMQEVFRLGTKQGREGKPIDIIAPLINLTKTQI 174

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            +L   +G      +  E + +CY G           C  C +C LR   + E   K
Sbjct: 175 IQLGNRLG------VPWELTWSCYSGGEHP-------CGVCDSCQLRWAAFHELGLK 218


>gi|115373156|ref|ZP_01460458.1| ExsB protein [Stigmatella aurantiaca DW4/3-1]
 gi|310824375|ref|YP_003956733.1| queuosine biosynthesis protein [Stigmatella aurantiaca DW4/3-1]
 gi|115369912|gb|EAU68845.1| ExsB protein [Stigmatella aurantiaca DW4/3-1]
 gi|309397447|gb|ADO74906.1| Queuosine biosynthesis protein [Stigmatella aurantiaca DW4/3-1]
          Length = 229

 Score =  168 bits (426), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 70/235 (29%), Positives = 104/235 (44%), Gaps = 26/235 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+TCL+ A         L+  YGQR+ VELE    V + +     +  
Sbjct: 2   KKAVVLLSGGLDSTTCLAMAKADGFEPVCLAIHYGQRHAVELERARQVAETMGARDFRIV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                   L L  +G  + ++  +   +       + +P T+VP RN++FL  A  LA  
Sbjct: 62  P-------LDLRGIGGSALTADIEVPKDRPETEMSHGIPVTYVPARNLLFLSLALGLAEV 114

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYET 180
           +G  +I IGV   DYSGYPDCR   I A  +   L  +         VH PL  + K + 
Sbjct: 115 VGAHDIYIGVNAVDYSGYPDCRPQFIEAFASVATLATKAGVEGQRFQVHAPLSGMTKAQI 174

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            +    +G      +    +H+CY          G  C  C +C LR+KG+ E  
Sbjct: 175 IREGTRLG------VDYGLTHSCYDPDAK-----GRACGHCDSCVLRKKGFQEAG 218


>gi|322388782|ref|ZP_08062379.1| transcription regulator ExsB [Streptococcus infantis ATCC 700779]
 gi|321140401|gb|EFX35909.1| transcription regulator ExsB [Streptococcus infantis ATCC 700779]
          Length = 217

 Score =  168 bits (426), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 100/226 (44%), Positives = 143/226 (63%), Gaps = 19/226 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WA   ++RVE ++F YGQR+ +E++    + ++       
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWAKQHYERVEAVTFAYGQRHHLEIQVAKEISEEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL +++LG I+ ++LT ++ ++ ++  +PNTFV GRN +FL FAA LA + 
Sbjct: 57  -----IRHHILDMSLLGQITENALTSDLEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQR 111

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GIT+IV GVCETD+SGYPDCR   ++++   +NL M+    + TPLMWL K ETW+LA  
Sbjct: 112 GITDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWELADQ 171

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
           +G  D V    E++ TCY G        G GC  CPAC+LRQ G  
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGTGCGDCPACHLRQHGLE 208


>gi|27366010|ref|NP_761538.1| queuosine biosynthesis protein QueC [Vibrio vulnificus CMCP6]
 gi|81447969|sp|Q8D985|QUEC_VIBVU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|27362210|gb|AAO11065.1| Queuosine Biosynthesis QueC ATPase [Vibrio vulnificus CMCP6]
          Length = 231

 Score =  168 bits (426), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 95/231 (41%), Positives = 141/231 (61%), Gaps = 15/231 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL+ FD V  ++FDYGQR+++E+E    + K++     K  
Sbjct: 2   NKAVVVFSGGQDSTTCLVKALNEFDEVHAITFDYGQRHRLEIEVAQNLAKELGVAAHKVM 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D      +  L  L   S +     V+ ++Q+N LPN+FVPGRNI+FL  A   AY++G 
Sbjct: 62  D------VTLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIGA 115

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I+ GVCETD+SGYPDCR D ++A+ +A+  GM+  + + TPLMWL K ETW LA    
Sbjct: 116 QTIITGVCETDFSGYPDCRDDFVKAMNSALVKGMDKPLVIQTPLMWLNKTETWALADQ-- 173

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
             + + L+ E++ TCY G        G GC  CP+C+LR+ G  ++ +  +
Sbjct: 174 -NNALQLVREKTLTCYNGI------IGDGCGDCPSCHLRKVGLNDYLDNRE 217


>gi|229529558|ref|ZP_04418948.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae 12129(1)]
 gi|229333332|gb|EEN98818.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae 12129(1)]
          Length = 231

 Score =  168 bits (426), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 97/229 (42%), Positives = 145/229 (63%), Gaps = 21/229 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  FD V  ++FDYGQR+K+E+E    + K++        
Sbjct: 2   KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQQLAKQLG------- 54

Query: 69  DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +    ++ +++L +++ SSLT++   V+ ++Q N LPN+FVPGRNI+FL  A   AY+
Sbjct: 55  --VTAHKVMDVSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQ 112

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G T ++ GVCETD+SGYPDCR + ++A+  A+  GM+  + + TPLMWL K ETW LA 
Sbjct: 113 IGATTVITGVCETDFSGYPDCRDEFVQAMNQALAKGMDLPLMIRTPLMWLNKAETWALAD 172

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            +G    ++L+  ++ TCY G        G GC  CPAC LRQ G   +
Sbjct: 173 QLGA---LDLVCHQTLTCYNG------LIGDGCGECPACGLRQAGLKAY 212


>gi|212694007|ref|ZP_03302135.1| hypothetical protein BACDOR_03532 [Bacteroides dorei DSM 17855]
 gi|237710328|ref|ZP_04540809.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|237723866|ref|ZP_04554347.1| queuosine biosynthesis protein queC [Bacteroides sp. D4]
 gi|294778361|ref|ZP_06743784.1| protein ExsB [Bacteroides vulgatus PC510]
 gi|212663539|gb|EEB24113.1| hypothetical protein BACDOR_03532 [Bacteroides dorei DSM 17855]
 gi|229437692|gb|EEO47769.1| queuosine biosynthesis protein queC [Bacteroides dorei 5_1_36/D4]
 gi|229455790|gb|EEO61511.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|294447623|gb|EFG16200.1| protein ExsB [Bacteroides vulgatus PC510]
          Length = 223

 Score =  168 bits (426), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 96/232 (41%), Positives = 133/232 (57%), Gaps = 17/232 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K+  AL++FSGGQDS+TCL WA   F +V  LSF YGQ++  E+E    +  K     
Sbjct: 1   MNKSD-ALVVFSGGQDSTTCLFWAKKHFRKVYALSFIYGQKHVKEVELARAIAGKAGVEF 59

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                S        +  LG  S +  T  +      ++ PNTFVPGRN+ FL  AA  A 
Sbjct: 60  KAMDVSF-------IGNLGKNSLTDTTITMDEVKPADSFPNTFVPGRNLFFLSIAAVYAR 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            LGI +IV GV +TD+SGYPDCR   I+++   +NL M+    +HTPLMW+ K ETW LA
Sbjct: 113 ELGINHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVLHTPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            ++G   +++LI  E+ TCY G +      G GC  CPAC LR++G  ++ E
Sbjct: 173 DELG---VLDLIRHETLTCYNGVQ------GDGCGHCPACKLRREGLEKYLE 215


>gi|300866059|ref|ZP_07110789.1| 7-cyano-7-deazaguanine synthase [Oscillatoria sp. PCC 6506]
 gi|300335920|emb|CBN55947.1| 7-cyano-7-deazaguanine synthase [Oscillatoria sp. PCC 6506]
          Length = 231

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 74/235 (31%), Positives = 104/235 (44%), Gaps = 29/235 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DSST L  A        T+SFDY QR+  ELE    +      +  +   
Sbjct: 2   KAVVLLSGGLDSSTVLYQAQADGCESYTISFDYQQRHLRELESAKAIALSAGVVKHQVV- 60

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMK----IQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    L++ G  + +    +            ++P T+VP RN IFL FA   A  
Sbjct: 61  ------SFDLSLWGGSALTDNKIDFPRDRTLAQMSESIPITYVPARNTIFLSFALAWAET 114

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKKYET 180
           L    I IGV   DYSGYPDCR D I+A++    LG +       +++ TPL+ LKK E 
Sbjct: 115 LNADRIYIGVNALDYSGYPDCRPDYIQAMQEVFRLGTKQGREGNPISILTPLIDLKKTEI 174

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            KL   +G      +  E++ +CY G           C  C +C LR   + E  
Sbjct: 175 IKLGNHLG------VPWEKTWSCYAGGE-------LACGLCDSCRLRVAAFEELG 216


>gi|285019179|ref|YP_003376890.1| transcriptional regulator, exsb family protein [Xanthomonas
           albilineans GPE PC73]
 gi|283474397|emb|CBA16898.1| putative transcriptional regulator, exsb family protein
           [Xanthomonas albilineans]
          Length = 221

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 68/239 (28%), Positives = 103/239 (43%), Gaps = 29/239 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            +A++L SGG DS+  ++ A  +   V  LS  YGQR+  EL+    V   +  +  K  
Sbjct: 2   KNAVVLLSGGMDSAVVVAIARAQGYAVHALSVRYGQRHTSELDAAARVASALNVVAHKTV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +       + L  +G  + +   +        + +P T+VP RN I L  A   A  LG 
Sbjct: 62  N-------VDLRSIGGSALTDDIEVPDAG--GSGIPVTYVPARNTIMLSVALGWAEVLGA 112

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKL 183
            +I  GV   DYSGYPDCR + I A +T  N+  ++ V      VH PL  + K +  + 
Sbjct: 113 ADIFCGVNAVDYSGYPDCRPEFIDAFQTLANIATKAGVEGAGLRVHAPLQQMSKADIVRE 172

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKY 238
              +G      +    + +CY          G  C  C AC LR  G+ E       +Y
Sbjct: 173 GVRLG------VDFGLTVSCYRAD-----AAGRACGHCDACRLRAAGFAEAGVPDPTRY 220


>gi|27467405|ref|NP_764042.1| hypothetical protein SE0487 [Staphylococcus epidermidis ATCC 12228]
 gi|57866294|ref|YP_187969.1| exsB protein [Staphylococcus epidermidis RP62A]
 gi|251810142|ref|ZP_04824615.1| ExsB family post-transcriptional regulator [Staphylococcus
           epidermidis BCM-HMP0060]
 gi|282875712|ref|ZP_06284583.1| protein ExsB [Staphylococcus epidermidis SK135]
 gi|293368168|ref|ZP_06614798.1| transcription regulator ExsB [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|81675233|sp|Q5HR20|QUEC_STAEQ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|81844015|sp|Q8CTH8|QUEC_STAES RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|27314948|gb|AAO04084.1|AE016745_183 conserved hypothetical protein [Staphylococcus epidermidis ATCC
           12228]
 gi|57636952|gb|AAW53740.1| exsB protein [Staphylococcus epidermidis RP62A]
 gi|251806334|gb|EES58991.1| ExsB family post-transcriptional regulator [Staphylococcus
           epidermidis BCM-HMP0060]
 gi|281295739|gb|EFA88262.1| protein ExsB [Staphylococcus epidermidis SK135]
 gi|291317702|gb|EFE58118.1| transcription regulator ExsB [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329735600|gb|EGG71884.1| queuosine biosynthesis protein QueC [Staphylococcus epidermidis
           VCU045]
 gi|329736844|gb|EGG73109.1| queuosine biosynthesis protein QueC [Staphylococcus epidermidis
           VCU028]
          Length = 223

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 92/237 (38%), Positives = 142/237 (59%), Gaps = 20/237 (8%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+        AL++FSGGQDS+TCL +A   F  VE ++F+YGQR+  E+E    + K  
Sbjct: 1   MSQNDLNKEKALVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDKEIEVAKKIAK-- 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                   +   + HIL +++L  ++ ++LT   ++++  D+ +PNTFVP RN++FL FA
Sbjct: 59  --------EQNLKHHILDMSLLSQLTPNALTQHELSIEDNDDGIPNTFVPARNLLFLSFA 110

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
             LAY++   +I+ GVCETD+SGYPDCR   I+++   ++L M+    +HTPLMWL K +
Sbjct: 111 GALAYQIHAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLSMDKDFVIHTPLMWLDKAQ 170

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           TW L+  +G   +++ I   + TCY G        G GC  CPAC+LR +G   + E
Sbjct: 171 TWALSDKLG---VLDYIRHNTLTCYNGI------IGDGCGECPACHLRARGLKHYLE 218


>gi|237714947|ref|ZP_04545428.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262409102|ref|ZP_06085647.1| queuosine biosynthesis protein queC [Bacteroides sp. 2_1_22]
 gi|294645237|ref|ZP_06722954.1| protein ExsB [Bacteroides ovatus SD CC 2a]
 gi|294809854|ref|ZP_06768533.1| protein ExsB [Bacteroides xylanisolvens SD CC 1b]
 gi|229444780|gb|EEO50571.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262353313|gb|EEZ02408.1| queuosine biosynthesis protein queC [Bacteroides sp. 2_1_22]
 gi|292639415|gb|EFF57716.1| protein ExsB [Bacteroides ovatus SD CC 2a]
 gi|294442940|gb|EFG11728.1| protein ExsB [Bacteroides xylanisolvens SD CC 1b]
          Length = 219

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 94/231 (40%), Positives = 138/231 (59%), Gaps = 22/231 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +AL++FSGGQDS+TCL WA   F +V  LSF YGQ+++ E+E    + +K       
Sbjct: 2   NREAALVVFSGGQDSTTCLFWAKRNFKKVYALSFLYGQKHQKEVEFAREIARKAE----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLA 123
                 E  ++ ++ +G + H+SLT    +  Q+   +++PNTFVPGRN+ FL  AA  A
Sbjct: 57  -----VEFDVMDVSFIGQLGHNSLTDTTMVMDQEKPADSVPNTFVPGRNLFFLSIAAVYA 111

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              GI ++V GV +TD+SGYPDCR   I+++   +NL M+    +HTPLMW+ K ETW L
Sbjct: 112 RERGINHLVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWAL 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           A  +G   ++ LI  E+ TCY G +      G GC  CPAC LR++G  ++
Sbjct: 172 ADKLG---VLELIRTETLTCYNGVQ------GDGCGHCPACTLRREGLEKY 213


>gi|186684589|ref|YP_001867785.1| exsB protein [Nostoc punctiforme PCC 73102]
 gi|254764363|sp|B2IUR7|QUEC_NOSP7 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|186467041|gb|ACC82842.1| exsB protein [Nostoc punctiforme PCC 73102]
          Length = 224

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 73/235 (31%), Positives = 104/235 (44%), Gaps = 29/235 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DSST L  A         +SFDY QR++ EL+  L V KK      +  +
Sbjct: 2   KAVILLSGGLDSSTILYKAKADGCECHAISFDYQQRHRQELQSALTVAKKAAIAKHQVVN 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKI----QDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    L   G  + +    ++  +        N+P T+VP RN IFL FA   A  
Sbjct: 62  -------FDLRQWGGSALTDDAIDLPQQRSLDEMSQNIPVTYVPARNTIFLSFALGYAEA 114

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYET 180
           +    + IGV   DYSGYPDCR D I A++    LG +       + +  PL+ LKK E 
Sbjct: 115 IAAERVYIGVNALDYSGYPDCRPDYIEAMQEVFRLGTKQGREGQPIKIVAPLINLKKTEI 174

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            +L  ++G      +  E + +CY G           C  C +C LR   + E  
Sbjct: 175 IQLGNELG------VPWELTWSCYAGND-------VACGVCDSCRLRLAAFAELG 216


>gi|160886302|ref|ZP_02067305.1| hypothetical protein BACOVA_04309 [Bacteroides ovatus ATCC 8483]
 gi|260173585|ref|ZP_05759997.1| putative aluminum resistance protein [Bacteroides sp. D2]
 gi|298484367|ref|ZP_07002527.1| ExsB protein [Bacteroides sp. D22]
 gi|299146794|ref|ZP_07039862.1| ExsB protein [Bacteroides sp. 3_1_23]
 gi|315921850|ref|ZP_07918090.1| queuosine biosynthesis protein queC [Bacteroides sp. D2]
 gi|156108187|gb|EDO09932.1| hypothetical protein BACOVA_04309 [Bacteroides ovatus ATCC 8483]
 gi|298269478|gb|EFI11079.1| ExsB protein [Bacteroides sp. D22]
 gi|298517285|gb|EFI41166.1| ExsB protein [Bacteroides sp. 3_1_23]
 gi|313695725|gb|EFS32560.1| queuosine biosynthesis protein queC [Bacteroides sp. D2]
          Length = 219

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 94/231 (40%), Positives = 139/231 (60%), Gaps = 22/231 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +AL++FSGGQDS+TCL WA   F +V  LSF YGQ+++ E+E    + +K       
Sbjct: 2   NREAALVVFSGGQDSTTCLFWAKRNFKKVYALSFLYGQKHQKEVELAREIARKAE----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLA 123
                 E  ++ ++ +G + H+SLT    +  Q+   +++PNTFVPGRN+ FL  AA  A
Sbjct: 57  -----VEFDVMDVSFIGQLGHNSLTDTTMVMDQEKPADSVPNTFVPGRNLFFLSIAAVYA 111

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              GI ++V GV +TD+SGYPDCR   I+++   +NL M+    +HTPLMW+ K ETW L
Sbjct: 112 RERGINHLVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWAL 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           A ++G   ++ LI  E+ TCY G +      G GC  CPAC LR++G  ++
Sbjct: 172 ADELG---VLELIRTETLTCYNGVQ------GDGCGHCPACTLRREGLEKY 213


>gi|296132467|ref|YP_003639714.1| exsB protein [Thermincola sp. JR]
 gi|296031045|gb|ADG81813.1| exsB protein [Thermincola potens JR]
          Length = 225

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 68/235 (28%), Positives = 100/235 (42%), Gaps = 26/235 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+ C+S A  +   +  +SF YGQR+  E+EC   V +          
Sbjct: 2   EKAVVLLSGGLDSTVCMSVAQKQGYELYPISFLYGQRHSREIECAKKVAEYYQVKKHLI- 60

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                     +  +G  + ++           + +P T+VP RN+IFL +A   A  +G 
Sbjct: 61  ------ITTNMDSIGGSALTANIDVPEGDENRSEIPVTYVPARNLIFLSYALGYAEVIGA 114

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLG------MESHVTVHTPLMWLKKYETWK 182
             I IGV   DYSGYPDCR + I   +   +         +  + +  PL+ L K E  K
Sbjct: 115 EKIFIGVNAVDYSGYPDCRPEFIERFQQLADYSTKAATQDKREIKIEAPLLNLTKAEIVK 174

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           L             LE + +CY G           C  C +C LR KG+ E   K
Sbjct: 175 LGVA------NKAPLELTTSCYRGGEK-------ACGRCDSCLLRLKGFKEAGLK 216


>gi|37679725|ref|NP_934334.1| queuosine biosynthesis protein QueC [Vibrio vulnificus YJ016]
 gi|81757651|sp|Q7ML86|QUEC_VIBVY RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|37198470|dbj|BAC94305.1| predicted ATPase [Vibrio vulnificus YJ016]
          Length = 232

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 95/231 (41%), Positives = 141/231 (61%), Gaps = 15/231 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL+ FD V  ++FDYGQR+++E+E    + K++     K  
Sbjct: 2   NKAVVVFSGGQDSTTCLVKALNEFDEVHAITFDYGQRHRLEIEVAQNLAKELGVAAHKVM 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D      +  L  L   S +     V+ ++Q+N LPN+FVPGRNI+FL  A   AY++G 
Sbjct: 62  D------VTLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIGA 115

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I+ GVCETD+SGYPDCR D ++A+ +A+  GM+  + + TPLMWL K ETW LA    
Sbjct: 116 ETIITGVCETDFSGYPDCRDDFVKAMNSALVKGMDKPLVIQTPLMWLNKAETWALADQ-- 173

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
             + + L+ E++ TCY G        G GC  CP+C+LR+ G  ++ +  +
Sbjct: 174 -NNALQLVREKTLTCYNGIV------GDGCGDCPSCHLRKVGLNDYLDNRE 217


>gi|153212723|ref|ZP_01948380.1| exsB protein [Vibrio cholerae 1587]
 gi|124116373|gb|EAY35193.1| exsB protein [Vibrio cholerae 1587]
          Length = 231

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 97/229 (42%), Positives = 144/229 (62%), Gaps = 21/229 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              +++FSGGQDS+TCL  AL  FD V  ++FDYGQR+K+E+E    + K++        
Sbjct: 2   KKTVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQQLAKQLG------- 54

Query: 69  DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +    ++ +++L +++ SSLT++   V+ ++Q N LPN+FVPGRNI+FL  A   AY+
Sbjct: 55  --VTAHKVMDVSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQ 112

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G T I+ GVCETD+SGYPDCR + ++A+  A+  GM+  + + TPLMWL K ETW LA 
Sbjct: 113 IGATTIITGVCETDFSGYPDCRDEFVQAMNQALAKGMDLPLMIRTPLMWLNKAETWALAD 172

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            +G    ++L+  ++ TCY G        G GC  CPAC LRQ G   +
Sbjct: 173 QLGA---LDLVRHQTLTCYNG------LIGDGCGECPACGLRQAGLKAY 212


>gi|229523532|ref|ZP_04412937.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae bv. albensis
           VL426]
 gi|229337113|gb|EEO02130.1| queuosine Biosynthesis QueC ATPase [Vibrio cholerae bv. albensis
           VL426]
          Length = 231

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 97/229 (42%), Positives = 145/229 (63%), Gaps = 21/229 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  FD V  ++FDYGQR+K+E+E    + K++        
Sbjct: 2   KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAQQLAKQLG------- 54

Query: 69  DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +    ++ +++L +++ SSLT++   V+ ++Q N LPN+FVPGRNI+FL  A   AY+
Sbjct: 55  --VTAHKVMDVSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQ 112

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G T ++ GVCETD+SGYPDCR + ++A+  A+  GM+  + + TPLMWL K ETW LA 
Sbjct: 113 IGATTVITGVCETDFSGYPDCRDEFVQAMNQALAKGMDLPLMIRTPLMWLNKAETWALAD 172

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            +G    ++L+  ++ TCY G        G GC  CPAC LRQ G   +
Sbjct: 173 QLGA---LHLVRHQTLTCYNG------LIGDGCGECPACGLRQAGLKAY 212


>gi|303242853|ref|ZP_07329317.1| exsB protein [Acetivibrio cellulolyticus CD2]
 gi|302589599|gb|EFL59383.1| exsB protein [Acetivibrio cellulolyticus CD2]
          Length = 222

 Score =  168 bits (425), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 84/232 (36%), Positives = 113/232 (48%), Gaps = 27/232 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++LFSGG DS+TCLS A      V  LSFDYGQR+K ELEC   + K           
Sbjct: 3   KAIVLFSGGLDSTTCLSVAFKEGYEVYPLSFDYGQRHKKELECVKQITKYY--------- 53

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +  + I+ +  +G  + +  +  V        +P T+VP RNIIFL +AA  A  +   
Sbjct: 54  KIKSNKIIRIDNVGGSALTDSSIEVPDYQGLPQIPVTYVPARNIIFLSYAAGYAEAIEAD 113

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKKYETWKLA 184
            I IGV   DYSGYPDCR + I A E  I +G +       + + TPL+ L K E  KLA
Sbjct: 114 AIYIGVNAVDYSGYPDCRPEFIEAFEKMIKVGTKRGVNGKPIKIETPLINLSKAEIIKLA 173

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            +       N  L  + +CY G+          C  C +C LR KG+ E   
Sbjct: 174 CE------NNAPLHLTTSCYKGEEK-------ACGVCDSCVLRLKGFKEAGI 212


>gi|117619436|ref|YP_856351.1| exsB protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
 gi|167016410|sp|A0KJA0|QUEC_AERHH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|117560843|gb|ABK37791.1| exsB protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
          Length = 235

 Score =  168 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 94/226 (41%), Positives = 138/226 (61%), Gaps = 15/226 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL R+D V  ++FDYGQR++ E+E    +  ++     K  
Sbjct: 2   KKAVVVFSGGQDSTTCLVQALSRYDEVHAITFDYGQRHREEIETARRLASQLGIAAHKVM 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D      +  L  L   + +     V+ ++QDN LPNTFVPGRNI+FL  AA  AY++G 
Sbjct: 62  D------VTMLGELAISALTRDEIPVSFELQDNGLPNTFVPGRNILFLTLAAIYAYQVGA 115

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++ GVCETD+SGYPDCR + ++A+  A++LG++  +   TPLMWL K ETW LA   G
Sbjct: 116 EAVITGVCETDFSGYPDCRDEFVKALNQAVSLGLDRAIRFETPLMWLDKAETWALADHYG 175

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
               ++ + +++ TCY G        G GC +CPAC LR +G  ++
Sbjct: 176 H---LDTVRQQTLTCYNGI------AGDGCGACPACDLRSRGLQQY 212


>gi|299769137|ref|YP_003731163.1| hypothetical protein AOLE_04465 [Acinetobacter sp. DR1]
 gi|298699225|gb|ADI89790.1| hypothetical protein AOLE_04465 [Acinetobacter sp. DR1]
          Length = 222

 Score =  168 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 72/241 (29%), Positives = 107/241 (44%), Gaps = 30/241 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             P A++L SGG DS+TCL+WA  R      +SF YGQR+  EL+    + ++       
Sbjct: 1   MRPRAIVLLSGGLDSTTCLAWAQAR-YECIAISFMYGQRSTTELDAAKALAQRAGVEHRV 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     + LA LG  + +     V  ++Q+      +VP RN IFL +A   A   
Sbjct: 60  IN--------IDLANLGGSALTDHNIAVPEQLQEGIPVT-YVPARNTIFLSYALAAAEVF 110

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETW 181
               IVIG+   DYSGYPDCR + I A      L  ++ V        TPL+ L K    
Sbjct: 111 NAEAIVIGINAVDYSGYPDCRPEFIDAFANMARLATKAGVEGKPLKFETPLLHLSKANII 170

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EK 237
           +L  + G      +   ++ +CY          G  C  C +C LR++G++E       +
Sbjct: 171 RLGIEHG------VDYSQTVSCYQAD-----AQGRACGKCDSCRLRKEGFIEAGVADPTR 219

Query: 238 Y 238
           Y
Sbjct: 220 Y 220


>gi|88810548|ref|ZP_01125805.1| exsB protein [Nitrococcus mobilis Nb-231]
 gi|88792178|gb|EAR23288.1| exsB protein [Nitrococcus mobilis Nb-231]
          Length = 243

 Score =  168 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 76/246 (30%), Positives = 109/246 (44%), Gaps = 29/246 (11%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + ++ P A++L SGG DS+T L+ A  +      LSFDYGQR+  EL     + K +   
Sbjct: 1   MNERHPRAVVLLSGGLDSTTTLAIAQAQGFCCFALSFDYGQRHASELSAGTAIAKAMSVA 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
             +          + L  LG  + + +   +        +P T+VP RN IFL +A   A
Sbjct: 61  EHRV-------LRIGLDDLGGSALTDVASPLPKP-PSKGIPATYVPARNTIFLAYALAYA 112

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG------MESHVTVHTPLMWLKK 177
             L   +I IGV   DYSGYPDCR + I A E   NL         S   + TPL+ L K
Sbjct: 113 EVLQAHDIFIGVNAIDYSGYPDCRPEFITAFEHMANLATKSSAEDRSCYHISTPLIQLTK 172

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK-- 235
            E  +    +G      +    + +CY   +      G  C  C ACY R KG+ +    
Sbjct: 173 AEIIQCGARLG------VDYSITVSCYNADQ-----IGRACGRCDACYYRAKGFRQAGMP 221

Query: 236 --EKYQ 239
              +YQ
Sbjct: 222 DPTRYQ 227


>gi|315613638|ref|ZP_07888545.1| transcription regulator ExsB [Streptococcus sanguinis ATCC 49296]
 gi|315314329|gb|EFU62374.1| transcription regulator ExsB [Streptococcus sanguinis ATCC 49296]
          Length = 217

 Score =  168 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 100/225 (44%), Positives = 141/225 (62%), Gaps = 19/225 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WA + ++ VE ++F YGQR+ +E++    + K+       
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWAKEHYETVEAITFAYGQRHHLEIQVAEEIAKEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL +++LG I+ ++LT ++ ++ ++  LPNTFV GRN +FL FAA LA + 
Sbjct: 57  -----VRHHILDMSLLGQITENALTSDMEIEQKEGELPNTFVDGRNHLFLSFAAILAKQR 111

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI +IV GVCETD+SGYPDCR   ++++   +NL M+    + TPLMWL K ETW LA  
Sbjct: 112 GIKDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWGLADQ 171

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
           +G  D V    E++ TCY G        G GC  CPAC+LRQ G 
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGSGCGDCPACHLRQHGL 207


>gi|260772756|ref|ZP_05881672.1| queuosine Biosynthesis QueC ATPase [Vibrio metschnikovii CIP 69.14]
 gi|260611895|gb|EEX37098.1| queuosine Biosynthesis QueC ATPase [Vibrio metschnikovii CIP 69.14]
          Length = 232

 Score =  168 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 99/231 (42%), Positives = 138/231 (59%), Gaps = 15/231 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  FD V  ++FDYGQR+K+E+E    +  K+     K  
Sbjct: 2   NKAVVVFSGGQDSTTCLVQALQEFDEVHAITFDYGQRHKLEIEVAQQLALKLGVKAHKVM 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D      +  L  L   S +     V+ ++Q N LPN+FVPGRNI+FL  A   AY++G 
Sbjct: 62  D------VSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQIGA 115

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I+ GVCETD+SGYPDCR+D ++A+  A+  GM+  +T+ TPLMWL K ETW LA    
Sbjct: 116 DTIITGVCETDFSGYPDCRNDFVKAMNHALVQGMDRQLTIRTPLMWLNKAETWALADQ-- 173

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
               ++L+  E+ TCY G        G GC +CPAC LR+ G  ++ +  Q
Sbjct: 174 -YQALDLVRNETLTCYNG------MIGDGCGTCPACELRKAGLNQYLQHPQ 217


>gi|237723138|ref|ZP_04553619.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|293372679|ref|ZP_06619061.1| protein ExsB [Bacteroides ovatus SD CMC 3f]
 gi|229447660|gb|EEO53451.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|292632488|gb|EFF51084.1| protein ExsB [Bacteroides ovatus SD CMC 3f]
          Length = 219

 Score =  168 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 94/231 (40%), Positives = 139/231 (60%), Gaps = 22/231 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +AL++FSGGQDS+TCL WA   F +V  LSF YGQ+++ E+E    + +K       
Sbjct: 2   NREAALVVFSGGQDSTTCLFWAKRNFKKVYALSFLYGQKHQKEVELAREIARKAE----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLA 123
                 E  ++ ++ +G + H+SLT    +  Q+   +++PNTFVPGRN+ FL  AA  A
Sbjct: 57  -----VEFDVMDVSFIGQLGHNSLTDTTMVMDQEKPADSVPNTFVPGRNLFFLSIAAVYA 111

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              GI ++V GV +TD+SGYPDCR   I+++   +NL M+    +HTPLMW+ K ETW L
Sbjct: 112 RERGINHLVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWAL 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           A ++G   ++ LI  E+ TCY G +      G GC  CPAC LR++G  ++
Sbjct: 172 ADELG---VLGLIRTETLTCYNGVQ------GDGCGHCPACTLRREGLEKY 213


>gi|164686486|ref|ZP_02210514.1| hypothetical protein CLOBAR_00051 [Clostridium bartlettii DSM
           16795]
 gi|164604497|gb|EDQ97962.1| hypothetical protein CLOBAR_00051 [Clostridium bartlettii DSM
           16795]
          Length = 224

 Score =  168 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 95/232 (40%), Positives = 143/232 (61%), Gaps = 21/232 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           A+++FSGGQDS+TCL WAL+RFD+V  ++F+Y Q++K+E+EC   + K++          
Sbjct: 9   AVVVFSGGQDSTTCLFWALERFDKVIAVTFNYNQKHKLEIECAKNIAKELG--------- 59

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQ--DNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             E HIL + +L  ++ ++LT++     +  D  LP+TFV GRN++FL FAA LA     
Sbjct: 60  -VEHHILDMDLLNQLAPNALTRDDIKIEEGKDGELPSTFVEGRNMVFLTFAAILAKTKNA 118

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
            +IV GVCETD+SGYPDCR   ++++    NL M+    +HTPLMWL K +TW+LA   G
Sbjct: 119 RHIVTGVCETDFSGYPDCRDVFVKSLNVTANLAMDYDFVMHTPLMWLDKAQTWELADKYG 178

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
               +  + E++ TCY G        G GC  CP+C LRQ G   + ++ ++
Sbjct: 179 ---KLEYVREKTLTCYNGI------IGDGCGECPSCKLRQHGLETYLKQKEE 221


>gi|150004784|ref|YP_001299528.1| putative aluminum resistance protein [Bacteroides vulgatus ATCC
           8482]
 gi|189038897|sp|A6L2J2|QUEC_BACV8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|149933208|gb|ABR39906.1| putative aluminum resistance protein [Bacteroides vulgatus ATCC
           8482]
          Length = 223

 Score =  168 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 96/232 (41%), Positives = 133/232 (57%), Gaps = 17/232 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K+  AL++FSGGQDS+TCL WA   F +V  LSF YGQ++  E+E    +  K     
Sbjct: 1   MNKSD-ALVVFSGGQDSTTCLFWAKKHFRKVYALSFIYGQKHVKEVELARVIAGKAGVEF 59

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                S        +  LG  S +  T  +      ++ PNTFVPGRN+ FL  AA  A 
Sbjct: 60  KAMDVSF-------IGNLGKNSLTDTTITMDEVKPADSFPNTFVPGRNLFFLSIAAVYAR 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            LGI +IV GV +TD+SGYPDCR   I+++   +NL M+    +HTPLMW+ K ETW LA
Sbjct: 113 ELGINHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVLHTPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            ++G   +++LI  E+ TCY G +      G GC  CPAC LR++G  ++ E
Sbjct: 173 DELG---VLDLIRHETLTCYNGVQ------GDGCGHCPACKLRREGLEKYLE 215


>gi|83593292|ref|YP_427044.1| ExsB [Rhodospirillum rubrum ATCC 11170]
 gi|110816255|sp|Q2RSY8|QUEC_RHORT RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|83576206|gb|ABC22757.1| ExsB [Rhodospirillum rubrum ATCC 11170]
          Length = 241

 Score =  168 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 76/235 (32%), Positives = 107/235 (45%), Gaps = 27/235 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DS+T L+ A      V  LSF YGQR+ VELE    V +           
Sbjct: 9   RAIVLVSGGLDSTTTLAIAQAEGFTVNALSFSYGQRHAVELEAARRVTQAFAVERHVIA- 67

Query: 70  SLGEDHILPLAILGDISHSSL---TKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                  + L   G  + +      K  +++     +P T+VP RN +FL FA   A  L
Sbjct: 68  ------TIDLRQFGGSALTDSIGVPKQRSLETMGAGIPVTYVPARNTVFLSFALAWAEVL 121

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPLMWLKKYET 180
              ++ IGV   DYSGYPDCR + I A +T  NL  +  V       +HTPL+ L K + 
Sbjct: 122 EANDVFIGVNALDYSGYPDCRPEYISAFQTMANLATKRGVEGTGVLTIHTPLIALTKGQI 181

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            +   D+G      +    +H+CY          G  C +C +C LR KG+ E  
Sbjct: 182 IRRGLDLG------VDYALTHSCYDP-----SAEGEACGTCDSCLLRLKGFAENG 225


>gi|78485246|ref|YP_391171.1| ExsB [Thiomicrospira crunogena XCL-2]
 gi|110816274|sp|Q31H76|QUEC_THICR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|78363532|gb|ABB41497.1| ExsB family protein [Thiomicrospira crunogena XCL-2]
          Length = 232

 Score =  168 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 68/233 (29%), Positives = 111/233 (47%), Gaps = 24/233 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+T L+ A  +     T+SFDYGQR++ EL     + +       +  
Sbjct: 7   KKAVVLLSGGLDSATVLAIAQAQGFECHTISFDYGQRHRAELIAAERISRVSGAKTHRVM 66

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +       + +  +G  + +  + +V +  ++   +P T+VP RN +FL +A  LA  L 
Sbjct: 67  E-------MNMHAIGGSALTDDSIDVPVSGVEKEMIPVTYVPARNTVFLSYALALAEVLE 119

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWK 182
             +I IGV   DYSGYPDCR + I A E   NL  +       + + TPL+ L K E  +
Sbjct: 120 ADDIFIGVNAVDYSGYPDCRPEYIAAYEKMANLATKAGVEGHKMHIQTPLIDLTKAEIIQ 179

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
               +G      +   ++ +CY   +      G  C  C +C LR++G+    
Sbjct: 180 TGVKLG------VDYSQTVSCYQADK-----NGAACGICDSCRLRKQGFENAG 221


>gi|16332015|ref|NP_442743.1| ExsB protein [Synechocystis sp. PCC 6803]
 gi|1001327|dbj|BAA10814.1| ExsB protein [Synechocystis sp. PCC 6803]
          Length = 271

 Score =  168 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 60/238 (25%), Positives = 104/238 (43%), Gaps = 30/238 (12%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               +A++L SGG DS+T  + A     RV  LSF+YGQR+  EL     + + +     
Sbjct: 39  SMTKTAVVLLSGGLDSATVAAIAKREGYRVIALSFNYGQRHDRELRAAADIVQALG---- 94

Query: 66  KWKDSLGEDHILPLAIL---GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                + E   + L +    G              ++ + +P+T+VPGRN +F+    +L
Sbjct: 95  -----IPEHFSINLDLAQWGGSSLTDRQQTLPQTGVEPDIIPSTYVPGRNTVFIALGLSL 149

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKK 177
           A   G   + +G+   DYSGYPDCR + +   +    L  +       + +  PL+ L K
Sbjct: 150 AEAKGAEAVFLGINAIDYSGYPDCRPEYLATYQQLAALSSKVGVEGRPIQLLAPLIELSK 209

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            +    A ++G      + + ++ +CY G  +        C  C +C LR +  +E  
Sbjct: 210 VDIVHKALELG------VPIAQTWSCYAGGEEP-------CGRCDSCRLRDQALIEAG 254


>gi|270158200|ref|ZP_06186857.1| queuosine biosynthesis protein QueC [Legionella longbeachae D-4968]
 gi|289163542|ref|YP_003453680.1| transcriptional regulator ExsB [Legionella longbeachae NSW150]
 gi|269990225|gb|EEZ96479.1| queuosine biosynthesis protein QueC [Legionella longbeachae D-4968]
 gi|288856715|emb|CBJ10526.1| putative transcriptional regulator ExsB [Legionella longbeachae
           NSW150]
          Length = 226

 Score =  168 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 67/233 (28%), Positives = 104/233 (44%), Gaps = 23/233 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+TCL+ A  +      +SF YGQR+  EL     + K       +  
Sbjct: 2   KKAVILLSGGLDSTTCLALAASKGFACYAISFSYGQRHSAELFAAQRIAKHYKAKTHQIV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L   +  + + +  + +V    + + +P T+VP RN IFL  A   A  +G 
Sbjct: 62  -------TLDTELFHNSALTDPSVDVPDFKEGSEIPVTYVPARNTIFLSMALGFAESIGA 114

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKL 183
            +I IG    DYS YPDCR + I A +T  NL  +        T+H PL +L K +T +L
Sbjct: 115 RDIFIGASSVDYSHYPDCRPEFISAFQTLANLATKAGVTGDSFTIHAPLQYLSKVQTIQL 174

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
              +G      +    + +CY          G  C  C +C  R++G++    
Sbjct: 175 GISLG------VDYSLTVSCYQANEA-----GEACGQCDSCTFRKRGFIGAGI 216


>gi|24379365|ref|NP_721320.1| putative ATPase, confers aluminum resistance [Streptococcus mutans
           UA159]
 gi|81451748|sp|Q8DUK7|QUEC_STRMU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|24377292|gb|AAN58626.1|AE014932_9 putative ATPase, confers aluminum resistance [Streptococcus mutans
           UA159]
          Length = 217

 Score =  168 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 101/228 (44%), Positives = 144/228 (63%), Gaps = 19/228 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WA+  ++ VET++F YGQR+  ELE    +          
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWAMKHYEYVETVTFSYGQRHSQELEVAKEIA--------- 52

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +   + HIL +++LG I+ ++LT ++A++ +D  +PNTFV GRN +FL FAA LA + 
Sbjct: 53  -AEQGVKHHILDMSLLGQITENALTSDIAIETKDGEVPNTFVDGRNHLFLSFAAVLAKQR 111

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I +IV GVC+TD+SGYPDCR   ++++   +NL M+    + TPLMWL K ETW+LA  
Sbjct: 112 KIRDIVTGVCQTDFSGYPDCRDVFVKSLNVTLNLAMDYEFVIQTPLMWLDKAETWELADQ 171

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           +G  D V     ++ TCY G R      G GC  CPAC+LRQ G  ++
Sbjct: 172 LGKFDYVRQ---KTLTCYNGIR------GTGCRQCPACHLRQAGLEKY 210


>gi|319901674|ref|YP_004161402.1| preQ(0) biosynthesis protein QueC [Bacteroides helcogenes P 36-108]
 gi|319416705|gb|ADV43816.1| preQ(0) biosynthesis protein QueC [Bacteroides helcogenes P 36-108]
          Length = 221

 Score =  168 bits (424), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 91/237 (38%), Positives = 139/237 (58%), Gaps = 24/237 (10%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN + K   +AL++FSGGQDS+TCL WA   F +V  LSF YGQ+++ E+E    +  + 
Sbjct: 1   MNKVNK--DAALVVFSGGQDSTTCLFWAKREFKKVYALSFLYGQKHQKEVELAREIAHRA 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISH---SSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
                       E  ++ ++ +G + H   + +   +  +   +  PNTFVPGRN+ FL 
Sbjct: 59  K----------VEFEVMDVSFIGKLGHNSLTDMNMAMDQEKPKDGFPNTFVPGRNLFFLS 108

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
            AA  A   GI++IV GV +TD+SGYPDCR   ++++   +NL M+    +HTPLMW+ K
Sbjct: 109 VAAVYARERGISHIVTGVSQTDFSGYPDCRDVFVKSLNVTLNLAMDEQFVLHTPLMWIDK 168

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            ETW LA ++G   +++L+  E+ TCY G +      G GC  CPAC LR++G  ++
Sbjct: 169 AETWALADELG---VLDLVRHETLTCYNGVQ------GDGCGHCPACKLRKEGLDKY 216


>gi|73663317|ref|YP_302098.1| hypothetical protein SSP2008 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|110816267|sp|Q49VQ7|QUEC_STAS1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|72495832|dbj|BAE19153.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 223

 Score =  168 bits (424), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 89/238 (37%), Positives = 140/238 (58%), Gaps = 20/238 (8%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M++       A+++FSGGQDS+TCL WA   F+ VE ++F YGQR+  E+E    +  + 
Sbjct: 1   MSEQTLDNNKAIVVFSGGQDSTTCLFWAKKHFESVELVTFAYGQRHDTEIEVAKQIADEQ 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                       + H+L +++L  ++ ++LT  ++ +++ D+ +PNTFVP RN++FL FA
Sbjct: 61  G----------VKHHLLDMSLLSQLTPNALTQHDLDIEVGDDGIPNTFVPARNLLFLSFA 110

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
             LAY+    +I+ GVCETD+SGYPDCR   ++++   ++L M+    +HTPLMWL K  
Sbjct: 111 GALAYQTNAKHIITGVCETDFSGYPDCRDSFVKSMNVTLSLSMDKDFVIHTPLMWLDKKA 170

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           TW L+ D+G   +++ I   + TCY G        G GC  CPAC LR  G   +  +
Sbjct: 171 TWALSDDLG---VLDYIRYNTLTCYNG------VIGDGCGECPACQLRANGLNAYLAE 219


>gi|224475853|ref|YP_002633459.1| putative ExsB family protein [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222420460|emb|CAL27274.1| putative ExsB family protein [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 223

 Score =  168 bits (424), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 92/238 (38%), Positives = 144/238 (60%), Gaps = 20/238 (8%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M         AL++FSGGQDS+TCL +A ++F+ VE ++F YGQR+  E+E    +  + 
Sbjct: 1   MASHTLDDNKALVVFSGGQDSTTCLFYAKEKFEEVELVTFQYGQRHDTEIEVAKKIADEQ 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                       + HIL +++L  ++ ++LT  N+ ++  D+ +PNTFVP RN++FL FA
Sbjct: 61  G----------LKHHILDMSLLSQLTPNALTQHNLEIEQTDDGVPNTFVPARNLLFLSFA 110

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
             LAY++   +I+ GVCETD+SGYPDCR D ++++   +NL M+ +  +HTPLMWL K E
Sbjct: 111 GALAYQIKARHIITGVCETDFSGYPDCRDDFVKSMNVTLNLSMDKNFVIHTPLMWLDKKE 170

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           TW L+  +G   +++ +  ++ TCY G          GC  CPAC LR +G   + E+
Sbjct: 171 TWALSDQLG---VLDYVRNQTLTCYNGI------IADGCGECPACKLRARGLNAYLEE 219


>gi|160891982|ref|ZP_02072985.1| hypothetical protein BACUNI_04441 [Bacteroides uniformis ATCC 8492]
 gi|270296365|ref|ZP_06202565.1| exsB protein [Bacteroides sp. D20]
 gi|317480437|ref|ZP_07939533.1| ExsB protein [Bacteroides sp. 4_1_36]
 gi|156858460|gb|EDO51891.1| hypothetical protein BACUNI_04441 [Bacteroides uniformis ATCC 8492]
 gi|270273769|gb|EFA19631.1| exsB protein [Bacteroides sp. D20]
 gi|316903384|gb|EFV25242.1| ExsB protein [Bacteroides sp. 4_1_36]
          Length = 218

 Score =  168 bits (424), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 95/231 (41%), Positives = 136/231 (58%), Gaps = 22/231 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +AL++FSGGQDS+TCL WA   F +V  LSF YGQ+++ E++    + +K       
Sbjct: 2   NRDTALVVFSGGQDSTTCLFWAKREFKKVYALSFLYGQKHQKEVDLARAIARKAG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLA 123
                 E  ++ ++ +G + H+SLT       Q+   ++ PNTFVPGRN+ FL  AA  A
Sbjct: 57  -----VEFEVMDVSFIGRLGHNSLTDAGMEMDQEKPADSFPNTFVPGRNLFFLSIAAVYA 111

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              GI +IV GV +TD+SGYPDCR   I+++   +NL M+    +HTPLMW+ K ETW L
Sbjct: 112 RERGINHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVLHTPLMWIDKAETWAL 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           A ++G   ++ LI  E+ TCY G        G GC  CPAC LR++G  +F
Sbjct: 172 ADELG---VLELIRHETLTCYNGIP------GDGCGHCPACTLRREGLEKF 213


>gi|242242079|ref|ZP_04796524.1| ExsB family post-transcriptional regulator [Staphylococcus
           epidermidis W23144]
 gi|242234464|gb|EES36776.1| ExsB family post-transcriptional regulator [Staphylococcus
           epidermidis W23144]
          Length = 223

 Score =  168 bits (424), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 92/237 (38%), Positives = 141/237 (59%), Gaps = 20/237 (8%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+        AL++FSGGQDS+TCL +A   F  VE ++F+YGQR+  E+E    + K  
Sbjct: 1   MSQNDLNKEKALVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDTEIEVAKKIAK-- 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                   +   + HIL +++L  ++ ++LT   + ++  D+ +PNTFVP RN++FL FA
Sbjct: 59  --------EQNLKHHILDMSLLSQLTPNALTQHELKIEDNDDGIPNTFVPARNLLFLSFA 110

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
             LAY++   +I+ GVCETD+SGYPDCR   I+++   ++L M+    +HTPLMWL K +
Sbjct: 111 GALAYQIHAKHIITGVCETDFSGYPDCRDSFIKSMNVTLSLSMDKDFVIHTPLMWLDKAQ 170

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           TW L+  +G   +++ I   + TCY G        G GC  CPAC+LR +G   + E
Sbjct: 171 TWALSDKLG---VLDYIRHNTLTCYNGI------IGDGCGECPACHLRARGLKHYLE 218


>gi|86145929|ref|ZP_01064257.1| predicted ATPase [Vibrio sp. MED222]
 gi|85836384|gb|EAQ54514.1| predicted ATPase [Vibrio sp. MED222]
          Length = 231

 Score =  168 bits (424), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 93/226 (41%), Positives = 135/226 (59%), Gaps = 15/226 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  +D V  ++FDYGQR+++E+E    + K +     K  
Sbjct: 2   KKAVVVFSGGQDSTTCLVQALKEYDEVHAITFDYGQRHRLEIEVAESLSKDLGVKAHKVM 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D      +  L  L   S +     V+ ++Q+N LPN+FVPGRNI+FL  A   AY++G 
Sbjct: 62  D------VTLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIGA 115

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++ GVCETD+SGYPDCR+D ++A+ +A+  GM+  + + TPLMWL K ETW LA    
Sbjct: 116 NTVITGVCETDFSGYPDCRNDFVKAMNSALVQGMDKPLDIKTPLMWLNKAETWALADQ-- 173

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
               + L+  ++ TCY G        G GC  CPAC LR+ G  ++
Sbjct: 174 -YSALELVRNKTLTCYNGI------IGDGCGDCPACELRKIGLSDY 212


>gi|330830003|ref|YP_004392955.1| putative (Aluminum) resistance protein with adenine nucleotide
           alpha hydrolase domain [Aeromonas veronii B565]
 gi|328805139|gb|AEB50338.1| Putative (Aluminum) resistance protein with adenine nucleotide
           alpha hydrolase domain [Aeromonas veronii B565]
          Length = 235

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 92/226 (40%), Positives = 137/226 (60%), Gaps = 15/226 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL R+D V  ++FDYGQR++ E++    +   +     K  
Sbjct: 2   KKAVVVFSGGQDSTTCLVQALARYDEVHAITFDYGQRHREEIDTARRLGSALGIAAHKVM 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D      +  L  L   + +     V+ ++QDN LPNTFVPGRNI+FL  A+  AY++G 
Sbjct: 62  D------VTLLNELAVSALTRDDIPVSCELQDNGLPNTFVPGRNILFLTLASIYAYQVGA 115

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++ GVCETD+SGYPDCR + ++A+  A++LG++  +   TPLMWL K ETW LA   G
Sbjct: 116 EAVITGVCETDFSGYPDCRDEFVKALNQAVSLGLDRGIRFETPLMWLDKAETWALADHYG 175

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
               ++ + +++ TCY G        G GC +CPAC LR++G   +
Sbjct: 176 H---LDTVRQQTLTCYNGI------AGDGCGTCPACELRRRGLNNY 212


>gi|293397470|ref|ZP_06641722.1| transcription regulator ExsB [Serratia odorifera DSM 4582]
 gi|291420049|gb|EFE93326.1| transcription regulator ExsB [Serratia odorifera DSM 4582]
          Length = 236

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 89/228 (39%), Positives = 134/228 (58%), Gaps = 13/228 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SA+++FSGGQDS+TCL  AL  +D V  L+FDYGQR+  E++    + KK+     K
Sbjct: 2   KNKSAVVVFSGGQDSTTCLVKALAEYDSVHCLTFDYGQRHSEEIKIAEQIAKKLNVSSHK 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D      I+    +  ++ + +      K     +P+TFVPGRNI+FL  AA  A+++
Sbjct: 62  ILDVN----IINELAISSLTRNEIEVPEHKKTGSEGIPSTFVPGRNIVFLTLAAIYAFQV 117

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
              +++ GVCETD+SGYPDCR   ++A+  A+ LG+   +   TPLM L K ETW LA +
Sbjct: 118 NAEDVITGVCETDFSGYPDCRDVFVKALNNAVTLGIGKDIRFVTPLMSLNKAETWALADN 177

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           +G    + LI +++ TCY G +       +GC  C AC+LR +G+ E+
Sbjct: 178 MG---YLELIRDDTLTCYNGVKS------FGCGKCDACFLRLRGFNEY 216


>gi|254521815|ref|ZP_05133870.1| exsB protein [Stenotrophomonas sp. SKA14]
 gi|219719406|gb|EED37931.1| exsB protein [Stenotrophomonas sp. SKA14]
          Length = 221

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 70/232 (30%), Positives = 99/232 (42%), Gaps = 25/232 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+  ++ A ++   V  LS  YGQR+  EL+    V K    +  K  
Sbjct: 2   KKAVVLLSGGMDSAAVIAMAQEQGFAVHALSVRYGQRHTSELDAAARVAKAQRVVAHKTV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D       + L  +G  + +              +P T+VP RN I L  A   A  LG 
Sbjct: 62  D-------VDLRSIGGSALTDDIDVPEAG--GAGIPVTYVPARNTIMLSLALGWAEVLGA 112

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKL 183
            +I  GV   DYSGYPDCR + + A +   NL  +S V      VH PL +L K +    
Sbjct: 113 NDIFCGVNAVDYSGYPDCRPEFVAAFQALANLATKSGVEGAGIQVHAPLQFLSKGQIVSE 172

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
              +G      +    + +CY          G  C  C AC LR +G+ E  
Sbjct: 173 GVRLG------VDFGLTVSCYNAD-----ANGAACGHCDACRLRAQGFAEAG 213


>gi|319786289|ref|YP_004145764.1| exsB protein [Pseudoxanthomonas suwonensis 11-1]
 gi|317464801|gb|ADV26533.1| exsB protein [Pseudoxanthomonas suwonensis 11-1]
          Length = 224

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 70/239 (29%), Positives = 99/239 (41%), Gaps = 29/239 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+ L SGG DS+  L+ A ++   V  LS  YGQR+  EL+    V   +     K  
Sbjct: 2   KKAVALVSGGMDSAVVLAIAREQGFAVHALSVRYGQRHTSELDAAARVASALGAAAHKTV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   + L  +G  + +   +          +P T+VP RN I L  A   A  LG 
Sbjct: 62  A-------IDLRSIGGSALTDDIEVPEAG--GEGIPVTYVPARNTIMLSAALGWAEVLGA 112

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKL 183
            +I  GV   DYSGYPDCR + I A E   NL  ++ V      VH PL+ + K E  + 
Sbjct: 113 ADIFCGVNAVDYSGYPDCRPEFIEAFERLANLATKAGVEGAGIRVHAPLLHMGKDEIVRE 172

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKY 238
              +G      +   ++ +CY          G  C  C AC LR  G+         +Y
Sbjct: 173 GLRLG------VDFAQTVSCYRADD-----QGLACGHCDACQLRAAGFATAGVADPTRY 220


>gi|54308161|ref|YP_129181.1| queuosine biosynthesis protein QueC [Photobacterium profundum SS9]
 gi|81400103|sp|Q6LTJ7|QUEC_PHOPR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|46912589|emb|CAG19379.1| putative exsB protein [Photobacterium profundum SS9]
          Length = 232

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 89/228 (39%), Positives = 136/228 (59%), Gaps = 15/228 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++FSGGQDS+TCL  A+  +D V  ++FDYGQR+K+E+E    + K++     K  D
Sbjct: 3   KAVVVFSGGQDSTTCLIQAIKNYDEVHCITFDYGQRHKLEIEVAQSITKELGITAHKVMD 62

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  L  L   S +     V+ ++Q N LPN+FVPGRNI+FL  +   AY++G  
Sbjct: 63  ------VGLLNELAISSLTRDNIEVSHELQANGLPNSFVPGRNILFLTLSGIYAYQIGAE 116

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++ GVCETD+SGYPDCR + ++++  ++ LGM+  + + TPLMWL K ETW LA     
Sbjct: 117 AVITGVCETDFSGYPDCRDEFVKSLNQSLVLGMDRALKIETPLMWLNKAETWALADQ--- 173

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
              ++ + E++ TCY G        G GC +CP+C LR+ G  ++   
Sbjct: 174 YKQLDFVREKTLTCYNGI------IGDGCGNCPSCDLRRAGLEDYLTN 215


>gi|169795076|ref|YP_001712869.1| hypothetical protein ABAYE0921 [Acinetobacter baumannii AYE]
 gi|260551477|ref|ZP_05825661.1| queuosine biosynthesis protein queC [Acinetobacter sp. RUH2624]
 gi|260556562|ref|ZP_05828780.1| queuosine biosynthesis protein queC [Acinetobacter baumannii ATCC
           19606]
 gi|332851075|ref|ZP_08433184.1| protein ExsB [Acinetobacter baumannii 6013150]
 gi|332869676|ref|ZP_08438864.1| protein ExsB [Acinetobacter baumannii 6013113]
 gi|332875965|ref|ZP_08443751.1| protein ExsB [Acinetobacter baumannii 6014059]
 gi|169148003|emb|CAM85866.1| conserved hypothetical protein; putative exported protein
           [Acinetobacter baumannii AYE]
 gi|260405471|gb|EEW98964.1| queuosine biosynthesis protein queC [Acinetobacter sp. RUH2624]
 gi|260409821|gb|EEX03121.1| queuosine biosynthesis protein queC [Acinetobacter baumannii ATCC
           19606]
 gi|322509050|gb|ADX04504.1| Queuosine biosynthesis protein queC [Acinetobacter baumannii
           1656-2]
 gi|323519032|gb|ADX93413.1| hypothetical protein ABTW07_2990 [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332730239|gb|EGJ61564.1| protein ExsB [Acinetobacter baumannii 6013150]
 gi|332732578|gb|EGJ63811.1| protein ExsB [Acinetobacter baumannii 6013113]
 gi|332735831|gb|EGJ66872.1| protein ExsB [Acinetobacter baumannii 6014059]
          Length = 227

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 72/247 (29%), Positives = 110/247 (44%), Gaps = 32/247 (12%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M   ++  P A++L SGG DS+TCL+WA  R      +SF YGQR+  EL+    + ++ 
Sbjct: 1   MEKNMR--PRAIVLLSGGLDSTTCLAWAQAR-YECIAISFMYGQRSTTELDAAKALAQRA 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                           + LA LG  + +     V  ++Q+      +VP RN IFL +A 
Sbjct: 58  GVEHRVIN--------IDLANLGGSALTDHNIAVPEQLQEGIPVT-YVPARNTIFLSYAL 108

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWL 175
             A       IVIG+   DYSGYPDCR + I A      L  ++ V        TPL+ L
Sbjct: 109 AAAEVFNAEAIVIGINAVDYSGYPDCRPEFIDAFANMARLATKAGVEGKPLKFETPLLHL 168

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K    +L  + G      +   ++ +CY          G  C  C +C LR++G+++  
Sbjct: 169 SKANIIRLGIEHG------VDYSQTVSCYQAD-----AQGRACGKCDSCRLRKEGFIDAG 217

Query: 236 ----EKY 238
                +Y
Sbjct: 218 VTDPTRY 224


>gi|121588012|ref|ZP_01677764.1| exsB protein [Vibrio cholerae 2740-80]
 gi|121547753|gb|EAX57844.1| exsB protein [Vibrio cholerae 2740-80]
          Length = 231

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 96/229 (41%), Positives = 144/229 (62%), Gaps = 21/229 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  FD V  ++FDY QR+K+E+E    + K++        
Sbjct: 2   KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYSQRHKLEIEVAQQLAKQLG------- 54

Query: 69  DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +    ++ +++L +++ SSLT++   V+ ++Q N LPN+FVPGRNI+FL  A   AY+
Sbjct: 55  --VTAHKVMDVSLLNELAISSLTRDDIPVSHELQANGLPNSFVPGRNILFLTLAGIYAYQ 112

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G T ++ GVCETD+SGYPDCR + ++A+  A+  GM+  + + TPLMWL K ETW LA 
Sbjct: 113 IGATTVITGVCETDFSGYPDCRDEFVQAMNQALAKGMDLPLMIRTPLMWLNKAETWALAD 172

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            +G    ++L+  ++ TCY G        G GC  CPAC LRQ G   +
Sbjct: 173 QLGA---LDLVRHQTLTCYNG------LIGDGCGECPACGLRQAGLKAY 212


>gi|126090178|ref|YP_001041659.1| queuosine biosynthesis protein QueC [Shewanella baltica OS155]
 gi|126174471|ref|YP_001050620.1| queuosine biosynthesis protein QueC [Shewanella baltica OS155]
 gi|217973440|ref|YP_002358191.1| queuosine biosynthesis protein QueC [Shewanella baltica OS223]
 gi|254764383|sp|B8E544|QUEC_SHEB2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|125997676|gb|ABN61751.1| exsB protein [Shewanella baltica OS155]
 gi|125999834|gb|ABN63904.1| hypothetical protein Sbal_4541 [Shewanella baltica OS155]
 gi|217498575|gb|ACK46768.1| exsB protein [Shewanella baltica OS223]
          Length = 240

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 97/240 (40%), Positives = 150/240 (62%), Gaps = 24/240 (10%)

Query: 1   MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           M+  +   P    A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E+E    + 
Sbjct: 1   MSTSLVSKPLASKAVVVFSGGQDSTTCLIQALTQYDEVHGITFDYGQRHREEIEVAKSLA 60

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNII 114
           K++          +    ++ + +L +++ S+LT++   V+ ++ +N LPNTFVPGRNI+
Sbjct: 61  KRL---------KITSHKVMDVTLLNELAISALTRDAIPVSHELMENGLPNTFVPGRNIL 111

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
           FL  A   AY+LG   I+ GVCETD+SGYPDCR+D ++A+E+A+  GM+  + + TPLMW
Sbjct: 112 FLTLAGIYAYQLGAEAIITGVCETDFSGYPDCRNDFVKAMESALVQGMDKQLKIITPLMW 171

Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           L K +TW LA        ++L+   + TCY G        G GC  CPAC+LR++G  E+
Sbjct: 172 LNKAQTWALADK---YQQLDLVRHHTLTCYNG------VIGDGCGDCPACHLRKRGLDEY 222


>gi|332975982|gb|EGK12854.1| transcription regulator ExsB [Desmospora sp. 8437]
          Length = 231

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 70/240 (29%), Positives = 111/240 (46%), Gaps = 31/240 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            A  A+++ SGG DS+TC+  A +    +  L+F YGQR+  E+E    V K        
Sbjct: 1   MAEKAVVVLSGGLDSTTCMGLAREAGYELYPLTFHYGQRHDREVEQARKVAKHFG----- 55

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
               + +  ++ +  L  I  S+LT +             +P+T+VP RN+IFL  A   
Sbjct: 56  ----VKKHRVVDMGFLRQIGGSALTDDKMEVPVPDGSGEEIPSTYVPARNLIFLSLATAY 111

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKK 177
           A  +G   + IGV   DYSGYPDCR + IR++E  +  G +     + + +  PL+ L K
Sbjct: 112 AEVIGAVKVYIGVSAVDYSGYPDCRPEFIRSMEETVRRGTKAGVNGNPIRLEAPLLHLSK 171

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            ET +    +       +    + +CY G R         C  C +C LR KG+ +   +
Sbjct: 172 GETIREGLRL------QVPYHLTTSCYRGDR-------VACGLCDSCRLRLKGFRDVGAE 218


>gi|295087937|emb|CBK69460.1| preQ(0) biosynthesis protein QueC [Bacteroides xylanisolvens XB1A]
          Length = 219

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 94/231 (40%), Positives = 138/231 (59%), Gaps = 22/231 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +AL++FSGGQDS+TCL WA   F +V  LSF YGQ+++ E+E    + +K       
Sbjct: 2   NREAALVVFSGGQDSTTCLFWAKRNFKKVYALSFLYGQKHQKEVELAREIARKAE----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLA 123
                 E  ++ ++ +G + H+SLT    +  Q+   +++PNTFVPGRN+ FL  AA  A
Sbjct: 57  -----VEFDVMDVSFIGQLGHNSLTDTTMVMDQEKPADSVPNTFVPGRNLFFLSIAAVYA 111

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              GI ++V GV +TD+SGYPDCR   I+++   +NL M+    +HTPLMW+ K ETW L
Sbjct: 112 RERGINHLVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVIHTPLMWIDKAETWAL 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           A  +G   ++ LI  E+ TCY G +      G GC  CPAC LR++G  ++
Sbjct: 172 ADKLG---VLELIRTETLTCYNGVQ------GDGCGHCPACTLRREGLEKY 213


>gi|160875274|ref|YP_001554590.1| queuosine biosynthesis protein QueC [Shewanella baltica OS195]
 gi|189029312|sp|A9L185|QUEC_SHEB9 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|160860796|gb|ABX49330.1| exsB protein [Shewanella baltica OS195]
 gi|315267468|gb|ADT94321.1| exsB protein [Shewanella baltica OS678]
          Length = 240

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 96/240 (40%), Positives = 150/240 (62%), Gaps = 24/240 (10%)

Query: 1   MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           M+  +   P    A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E+E    + 
Sbjct: 1   MSTSLVSKPLASKAVVVFSGGQDSTTCLIQALTQYDEVHGITFDYGQRHREEIEVAKSLA 60

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNII 114
           K++          +    ++ + +L +++ S+LT++   V+ ++ +N LPNTFVPGRNI+
Sbjct: 61  KRL---------KITSHKVMDVTLLNELAISALTRDAIPVSHELMENGLPNTFVPGRNIL 111

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
           FL  A   AY+LG   I+ GVCETD+SGYPDCR+D ++A+E+A+  GM+  + + TPLMW
Sbjct: 112 FLTLAGIYAYQLGADAIITGVCETDFSGYPDCRNDFVKAMESALVQGMDKQLKIITPLMW 171

Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           L K +TW LA        ++L+   + TCY G        G GC  CPAC+LR++G  ++
Sbjct: 172 LNKAQTWALADK---YQQLDLVRHHTLTCYNGI------IGDGCGDCPACHLRKRGLDDY 222


>gi|161830778|ref|YP_001597812.1| queuosine biosynthesis protein QueC [Coxiella burnetii RSA 331]
 gi|189038913|sp|A9NBS5|QUEC_COXBR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|161762645|gb|ABX78287.1| queuosine biosynthesis protein QueC [Coxiella burnetii RSA 331]
          Length = 226

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 73/234 (31%), Positives = 109/234 (46%), Gaps = 23/234 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+TCL+ A  +      LSFDYGQ++  EL     +      +  +  
Sbjct: 2   KKAVILISGGLDSTTCLAVAKSKGFSCYALSFDYGQKHHSELVAAEKIAAHFNVVRHEVV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L +  LG  + +  + +V     + ++P T+VP RN IFL  A   A  L  
Sbjct: 62  -------TLSIGKLGGSALTDNSLDVPDYGGNESIPITYVPARNTIFLSIALGWAEILDA 114

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKL 183
            +I+IG    DYSGYPDCR + I A +   NL  +       + +  PL+ L K ET KL
Sbjct: 115 ESILIGASAIDYSGYPDCRPEYIAAFQNLANLATKRGIEGHSIKIEAPLIHLSKAETIKL 174

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
              +G      +    + +CY    +     G  C  C +C LR+KG+ E + K
Sbjct: 175 GYSLG------VDYSMTVSCYRANEE-----GLACGYCDSCELRKKGFKEAEIK 217


>gi|90414825|ref|ZP_01222792.1| putative exsB protein [Photobacterium profundum 3TCK]
 gi|90324068|gb|EAS40655.1| putative exsB protein [Photobacterium profundum 3TCK]
          Length = 232

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 89/231 (38%), Positives = 144/231 (62%), Gaps = 21/231 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++FSGGQDS+TCL  A++ +D V  ++FDYGQR+K+E+E    + K++         
Sbjct: 3   KAVVVFSGGQDSTTCLIQAIENYDEVHCITFDYGQRHKLEIEVAQSITKELG-------- 54

Query: 70  SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +    ++ + +L +++ SSLT++   V+ ++Q N LPN+FVPGRNI+FL  +   AY++
Sbjct: 55  -ITAHKVMDVGLLNELAISSLTRDNIAVSHELQANGLPNSFVPGRNILFLTLSGIYAYQI 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   ++ GVCETD+SGYPDCR + ++++  ++ LGM+  + + TPLMWL K ETW LA  
Sbjct: 114 GAEAVITGVCETDFSGYPDCRDEFVKSLNQSLVLGMDRALKIETPLMWLNKAETWALADQ 173

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                 ++ + E++ TCY G        G GC  CP+C LR+ G  ++   
Sbjct: 174 ---YKQLDFVREKTLTCYNGI------IGDGCGDCPSCDLRRAGLEDYLTN 215


>gi|119504268|ref|ZP_01626348.1| ExsB protein [marine gamma proteobacterium HTCC2080]
 gi|119459776|gb|EAW40871.1| ExsB protein [marine gamma proteobacterium HTCC2080]
          Length = 221

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 69/238 (28%), Positives = 106/238 (44%), Gaps = 28/238 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DS+T L+ A     +   LSFDYGQR++ EL     V      ++ K   
Sbjct: 2   KAVVLTSGGLDSATVLAMAHAAGRQCYALSFDYGQRHRAELSAAARVAASFEGIIHKTV- 60

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                  L L  +G  + +    +V ++  +      +VP RN +FL  A   A  +G +
Sbjct: 61  ------SLDLRGIGGSALTDDAIDVPVEPTEGIPVT-YVPARNTVFLSIALGWAEVIGAS 113

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKLA 184
            I IGV   DYSGYPDCR + I A      +  +       + + TP++ L K E     
Sbjct: 114 EIYIGVNAVDYSGYPDCRPEFIDAFGALAAVATKAGVEGDPIKICTPIIDLTKAEIIARG 173

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKY 238
            D+G      +  E++ +CY    +     G  C  C +C LR +G+ E       +Y
Sbjct: 174 MDLG------VDYEQTVSCYQASDE-----GKACGRCDSCRLRAQGFFEAGVSDPTRY 220


>gi|114563048|ref|YP_750561.1| exsB protein [Shewanella frigidimarina NCIMB 400]
 gi|122299841|sp|Q082U2|QUEC_SHEFN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|114334341|gb|ABI71723.1| exsB protein [Shewanella frigidimarina NCIMB 400]
          Length = 235

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 97/243 (39%), Positives = 146/243 (60%), Gaps = 22/243 (9%)

Query: 1   MNDIIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           M+D  +  P  AL++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E+E    +  +
Sbjct: 1   MSDAKQNTPTKALVVFSGGQDSTTCLIQALSQYDEVHGITFDYGQRHRQEIEVAKSLATE 60

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFL 116
           +          L    ++   +L +++ S+LT++      +   N LPNTFVPGRNI+FL
Sbjct: 61  L---------KLASHKVMDTTLLNELAISALTRDAIPVSHELMNNGLPNTFVPGRNILFL 111

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
             A   AY+LG   I+ GVCETD+SGYPDCR++ +++++ ++ LGM+  + + TPLMWL 
Sbjct: 112 TLAGIYAYQLGCDAIITGVCETDFSGYPDCRNEFVQSMQNSLALGMDKPLKIITPLMWLN 171

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           K ETW LA        + L+  ++ TCY G        G GC  CPAC LRQ+G  ++ +
Sbjct: 172 KAETWALADK---YQQLALVQHQTLTCYNGIV------GKGCGDCPACVLRQRGLDDYLQ 222

Query: 237 KYQ 239
             Q
Sbjct: 223 NSQ 225


>gi|89073465|ref|ZP_01159988.1| putative exsB protein [Photobacterium sp. SKA34]
 gi|89050729|gb|EAR56210.1| putative exsB protein [Photobacterium sp. SKA34]
          Length = 231

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 92/228 (40%), Positives = 144/228 (63%), Gaps = 21/228 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++FSGGQDS+TCL  AL  +D V  ++FDYGQR+K+E+E    + K +         
Sbjct: 3   KAVVVFSGGQDSTTCLIQALAHYDEVHCITFDYGQRHKLEIEVAEAIAKDLG-------- 54

Query: 70  SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +    ++ + +L +++ SSLT++   V+ ++Q+N LPN+FVPGRNI+FL  A   AY++
Sbjct: 55  -VTAHKVMDVGLLNELAISSLTRDNIAVSHELQENGLPNSFVPGRNILFLTLAGIYAYQI 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   ++ GVCETD+SGYPDCR + ++++  ++ LGM+  +T+ TPLMWL K ETW LA  
Sbjct: 114 GAETVITGVCETDFSGYPDCRDEFVKSLNQSLVLGMDRPLTIATPLMWLNKAETWALADQ 173

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
                 ++ + E++ TCY G        G GC  CP+C LR+ G  ++
Sbjct: 174 ---YQKLDYVREKTLTCYNGI------IGDGCGDCPSCDLRRAGLNDY 212


>gi|322377476|ref|ZP_08051967.1| ExsB protein [Streptococcus sp. M334]
 gi|321281676|gb|EFX58685.1| ExsB protein [Streptococcus sp. M334]
          Length = 217

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 99/225 (44%), Positives = 142/225 (63%), Gaps = 19/225 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WA + ++ VE ++F YGQR+ +E++    + K+       
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWAKEHYETVEAVTFAYGQRHHLEIQVAREIAKEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL +++LG I+ ++LT ++ +K ++  +PNTFV GRN +FL FAA LA + 
Sbjct: 57  -----IRHHILDMSLLGQITENALTSDLEIKQKEGEVPNTFVDGRNHLFLSFAAILAKQR 111

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G+ +IV GVCETD+SGYPDCR   ++++   +NL M+    + TPLMWL K ETW+LA  
Sbjct: 112 GMKDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWELADQ 171

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
           +G  D V    E++ TCY G        G GC  CPAC+LRQ G 
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGSGCGDCPACHLRQHGL 207


>gi|90579979|ref|ZP_01235787.1| putative exsB protein [Vibrio angustum S14]
 gi|90438864|gb|EAS64047.1| putative exsB protein [Vibrio angustum S14]
          Length = 231

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 92/228 (40%), Positives = 144/228 (63%), Gaps = 21/228 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++FSGGQDS+TCL  AL  +D V  ++FDYGQR+K+E+E    + K +         
Sbjct: 3   KAVVVFSGGQDSTTCLIQALAHYDEVHCITFDYGQRHKLEIEVAEAIAKDLG-------- 54

Query: 70  SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +    ++ + +L +++ SSLT++   V+ ++Q+N LPN+FVPGRNI+FL  A   AY++
Sbjct: 55  -VTAHKVMDVGLLNELAISSLTRDNIAVSHELQENGLPNSFVPGRNILFLTLAGIYAYQI 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   ++ GVCETD+SGYPDCR + ++++  ++ LGM+  +T+ TPLMWL K ETW LA  
Sbjct: 114 GAETVITGVCETDFSGYPDCRDEFVKSLNQSLILGMDRPLTIATPLMWLNKAETWALADQ 173

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
                 ++ + E++ TCY G        G GC  CP+C LR+ G  ++
Sbjct: 174 ---YQKLDYVREKTLTCYNGI------IGDGCGDCPSCDLRRAGLNDY 212


>gi|153000639|ref|YP_001366320.1| queuosine biosynthesis protein QueC [Shewanella baltica OS185]
 gi|189029311|sp|A6WN68|QUEC_SHEB8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|151365257|gb|ABS08257.1| exsB protein [Shewanella baltica OS185]
          Length = 240

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 96/240 (40%), Positives = 150/240 (62%), Gaps = 24/240 (10%)

Query: 1   MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           M+  +   P    A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E+E    + 
Sbjct: 1   MSTSLVSKPSASKAVVVFSGGQDSTTCLIQALTQYDEVHGITFDYGQRHREEIEVAKSLA 60

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNII 114
           K++          +    ++ + +L +++ S+LT++   V+ ++ +N LPNTFVPGRNI+
Sbjct: 61  KRL---------KITSHKVMDVTLLNELAISALTRDAIPVSHELMENGLPNTFVPGRNIL 111

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
           FL  A   AY+LG   I+ GVCETD+SGYPDCR+D ++A+E+A+  GM+  + + TPLMW
Sbjct: 112 FLTLAGIYAYQLGAEAIITGVCETDFSGYPDCRNDFVKAMESALVQGMDKQLKIITPLMW 171

Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           L K +TW LA        ++L+   + TCY G        G GC  CPAC+LR++G  ++
Sbjct: 172 LNKAQTWALADK---YQQLDLVRHHTLTCYNG------VIGDGCGDCPACHLRKRGLDDY 222


>gi|184159136|ref|YP_001847475.1| PP-loop superfamily ATPase [Acinetobacter baumannii ACICU]
 gi|213158262|ref|YP_002320313.1| ExsB protein [Acinetobacter baumannii AB0057]
 gi|215482626|ref|YP_002324818.1| Queuosine biosynthesis protein queC [Acinetobacter baumannii
           AB307-0294]
 gi|239501046|ref|ZP_04660356.1| hypothetical protein AbauAB_01927 [Acinetobacter baumannii AB900]
 gi|301346461|ref|ZP_07227202.1| hypothetical protein AbauAB0_09454 [Acinetobacter baumannii AB056]
 gi|301512447|ref|ZP_07237684.1| hypothetical protein AbauAB05_12717 [Acinetobacter baumannii AB058]
 gi|301594744|ref|ZP_07239752.1| hypothetical protein AbauAB059_03007 [Acinetobacter baumannii
           AB059]
 gi|183210730|gb|ACC58128.1| predicted PP-loop superfamily ATPase [Acinetobacter baumannii
           ACICU]
 gi|193078033|gb|ABO12959.2| hypothetical protein A1S_2542 [Acinetobacter baumannii ATCC 17978]
 gi|213057422|gb|ACJ42324.1| ExsB protein [Acinetobacter baumannii AB0057]
 gi|213987229|gb|ACJ57528.1| Queuosine biosynthesis protein queC [Acinetobacter baumannii
           AB307-0294]
          Length = 223

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 71/241 (29%), Positives = 107/241 (44%), Gaps = 30/241 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             P A++L SGG DS+TCL+WA  R      +SF YGQR+  EL+    + ++       
Sbjct: 1   MRPRAIVLLSGGLDSTTCLAWAQAR-YECIAISFMYGQRSTTELDAAKALAQRAGVEHRV 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     + LA LG  + +     V  ++Q+      +VP RN IFL +A   A   
Sbjct: 60  IN--------IDLANLGGSALTDHNIAVPEQLQEGIPVT-YVPARNTIFLSYALAAAEVF 110

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETW 181
               IVIG+   DYSGYPDCR + I A      L  ++ V        TPL+ L K    
Sbjct: 111 NAEAIVIGINAVDYSGYPDCRPEFIDAFANMARLATKAGVEGKPLKFETPLLHLSKANII 170

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EK 237
           +L  + G      +   ++ +CY          G  C  C +C LR++G+++       +
Sbjct: 171 RLGIEHG------VDYSQTVSCYQAD-----AQGRACGKCDSCRLRKEGFIDAGVTDPTR 219

Query: 238 Y 238
           Y
Sbjct: 220 Y 220


>gi|254883022|ref|ZP_05255732.1| queuosine biosynthesis protein queC [Bacteroides sp. 4_3_47FAA]
 gi|319641866|ref|ZP_07996543.1| queuosine biosynthesis protein queC [Bacteroides sp. 3_1_40A]
 gi|254835815|gb|EET16124.1| queuosine biosynthesis protein queC [Bacteroides sp. 4_3_47FAA]
 gi|317386539|gb|EFV67441.1| queuosine biosynthesis protein queC [Bacteroides sp. 3_1_40A]
          Length = 223

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 96/232 (41%), Positives = 133/232 (57%), Gaps = 17/232 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K+  AL++FSGGQDS+TCL WA   F +V  LSF YGQ++  E+E    +  K     
Sbjct: 1   MNKSD-ALVVFSGGQDSTTCLFWAKKHFRKVYALSFIYGQKHVKEVELARVIAGKAGVEF 59

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                S        +  LG  S +  T  +      ++ PNTFVPGRN+ FL  AA  A 
Sbjct: 60  KAMDVSF-------IGNLGKNSLTDTTITMDEVKPADSFPNTFVPGRNLFFLSIAAVYAR 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            LGI +IV GV +TD+SGYPDCR   I+++   +NL M+    +HTPLMW+ K ETW LA
Sbjct: 113 ELGINHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVLHTPLMWINKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            ++G   +++LI  E+ TCY G +      G GC  CPAC LR++G  ++ E
Sbjct: 173 DELG---VLDLIRHETLTCYNGVQ------GDGCGHCPACKLRREGLEKYLE 215


>gi|157375185|ref|YP_001473785.1| ExsB protein [Shewanella sediminis HAW-EB3]
 gi|189029565|sp|A8FUY4|QUEC_SHESH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|157317559|gb|ABV36657.1| ExsB protein [Shewanella sediminis HAW-EB3]
          Length = 232

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 99/233 (42%), Positives = 149/233 (63%), Gaps = 21/233 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K   A+++FSGGQDS+TCL  AL+++D V  ++FDYGQR+  E+E    + +++    
Sbjct: 1   MSKVSKAVVVFSGGQDSTTCLIQALNQYDEVHGITFDYGQRHSQEIEVARSLGQRLG--- 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                 L    IL +++L +++ S+LT++   V+ ++ +N LPNTFVPGRNI+FL  A  
Sbjct: 58  ------LVSHKILDVSMLNELAISALTRDSIEVSNELMENGLPNTFVPGRNILFLTLAGI 111

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            AY+LG  +++ GVCETD+SGYPDCR+D ++ +E+A+N GM+    + TPLMWL K ETW
Sbjct: 112 YAYQLGADSVITGVCETDFSGYPDCRNDFVKTMESALNQGMDRQCKIVTPLMWLNKAETW 171

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            LA        + L+ +E+ TCY G        G GC +CPAC LRQ G  ++
Sbjct: 172 ALADQ---YKSLELVRDETLTCYNGI------IGNGCGTCPACLLRQSGLEDY 215


>gi|269103133|ref|ZP_06155830.1| queuosine Biosynthesis QueC ATPase [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163031|gb|EEZ41527.1| queuosine Biosynthesis QueC ATPase [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 234

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 91/225 (40%), Positives = 137/225 (60%), Gaps = 15/225 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++FSGGQDS+TCL  AL  +D V  ++FDYGQR+K+E+E    + +++     K  D
Sbjct: 3   KAVVVFSGGQDSTTCLIQALAHYDEVHCITFDYGQRHKLEIEVAQAITQELGVAAHKVMD 62

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  L  L   S +     V+ ++Q+N LPN+FVPGRNI+FL  A   AY++G  
Sbjct: 63  ------VGLLNELAISSLTRDNIAVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIGAE 116

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++ GVCETD+SGYPDCR + ++++  ++ LGM+  + + TPLMWL K ETW LA   G 
Sbjct: 117 AVITGVCETDFSGYPDCRDEFVKSLNQSLVLGMDRPLRIETPLMWLNKAETWALADQYG- 175

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              ++ + E++ TCY G        G GC  CP+C LR+ G  ++
Sbjct: 176 --KLDYVREKTLTCYNGI------IGDGCGDCPSCDLRRAGLEDY 212


>gi|110816273|sp|Q55468|QUEC_SYNY3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
          Length = 232

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 30/237 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +A++L SGG DS+T  + A     RV  LSF+YGQR+  EL     + + +      
Sbjct: 1   MTKTAVVLLSGGLDSATVAAIAKREGYRVIALSFNYGQRHDRELRAAADIVQALG----- 55

Query: 67  WKDSLGEDHILPLAIL---GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
               + E   + L +    G              ++ + +P+T+VPGRN +F+    +LA
Sbjct: 56  ----IPEHFSINLDLAQWGGSSLTDRQQTLPQTGVEPDIIPSTYVPGRNTVFIALGLSLA 111

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKY 178
              G   + +G+   DYSGYPDCR + +   +    L  +       + +  PL+ L K 
Sbjct: 112 EAKGAEAVFLGINAIDYSGYPDCRPEYLATYQQLAALSSKVGVEGRPIQLLAPLIELSKV 171

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           +    A ++G      + + ++ +CY G  +        C  C +C LR +  +E  
Sbjct: 172 DIVHKALELG------VPIAQTWSCYAGGEEP-------CGRCDSCRLRDQALIEAG 215


>gi|85709640|ref|ZP_01040705.1| ExsB [Erythrobacter sp. NAP1]
 gi|85688350|gb|EAQ28354.1| ExsB [Erythrobacter sp. NAP1]
          Length = 232

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 68/233 (29%), Positives = 102/233 (43%), Gaps = 24/233 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            P A++L SGG DS    + AL+    V  L+ DYGQR++ EL     + +K+       
Sbjct: 10  RPKAVVLLSGGLDSMVSAATALENGFDVHALTIDYGQRHRRELAAARSIAEKL------- 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             S   +  L L   G  + +    +V      +++P T+VP RN++FL      A   G
Sbjct: 63  DLSSQTELALDLTAFGGSALTD-EIDVPKGGVGDDIPVTYVPARNLVFLALTTACAEAAG 121

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWK 182
             +I IGV   DYSGYPDCR + I +      LG +     +   +H PL  + K +  +
Sbjct: 122 ANDIFIGVNALDYSGYPDCRPEFIASFAETAKLGTKAGVEAAPFKIHAPLQNMTKADIAR 181

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
               +       L    S +CY          G  C  C +C LR+KG+ E  
Sbjct: 182 ECARL------RLDPSWSWSCYDP-----TPEGLACGLCDSCRLRKKGFEEAG 223


>gi|206577844|ref|YP_002240076.1| queuosine biosynthesis protein QueC [Klebsiella pneumoniae 342]
 gi|288936827|ref|YP_003440886.1| exsB protein [Klebsiella variicola At-22]
 gi|290510117|ref|ZP_06549487.1| exsB protein [Klebsiella sp. 1_1_55]
 gi|254764354|sp|B5Y0T5|QUEC_KLEP3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|206566902|gb|ACI08678.1| queuosine biosynthesis protein QueC [Klebsiella pneumoniae 342]
 gi|288891536|gb|ADC59854.1| exsB protein [Klebsiella variicola At-22]
 gi|289776833|gb|EFD84831.1| exsB protein [Klebsiella sp. 1_1_55]
          Length = 233

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 91/230 (39%), Positives = 136/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  K+  +     
Sbjct: 2   KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGAVA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       +     +PNTFVPGRNI+FL   A  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDNIPVPDYQPDAEGIPNTFVPGRNILFLTLTAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    I+ GVCETD+SGYPDCR + ++A+  A++LGM   +   TPLMWL K ETW LA
Sbjct: 113 QVKAEAIITGVCETDFSGYPDCRDEFVKALHHAVSLGMAKDIRFETPLMWLNKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+ +E+ TCY G +      G GC  C AC LR  G  ++
Sbjct: 173 DFWGQ---LDLVRQETLTCYNGIK------GDGCGQCAACNLRANGLNQY 213


>gi|152968979|ref|YP_001334088.1| queuosine biosynthesis protein QueC [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|262042480|ref|ZP_06015639.1| transcription regulator ExsB [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|167016431|sp|A6T5I7|QUEC_KLEP7 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|150953828|gb|ABR75858.1| putative (aluminum) resistance protein [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|259040184|gb|EEW41296.1| transcription regulator ExsB [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 233

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 91/230 (39%), Positives = 135/230 (58%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  K+  +     
Sbjct: 2   KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGAVA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       +     +PNTFVPGRNI+FL   A  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDNIPVPDYQPDAEGIPNTFVPGRNILFLTLTAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    I+ GVCETD+SGYPDCR + ++A+  A++LGM   +   TPLMWL K ETW LA
Sbjct: 113 QVKAEAIITGVCETDFSGYPDCRDEFVKALHHAVSLGMAKDIRFETPLMWLNKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+  E+ TCY G +      G GC  C AC LR  G  ++
Sbjct: 173 DYWGQ---LDLVRRETLTCYNGIK------GDGCGQCAACNLRANGLNQY 213


>gi|110833623|ref|YP_692482.1| exsB protein [Alcanivorax borkumensis SK2]
 gi|110646734|emb|CAL16210.1| exsB protein, putative [Alcanivorax borkumensis SK2]
          Length = 227

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 73/246 (29%), Positives = 111/246 (45%), Gaps = 30/246 (12%)

Query: 5   IKKA--PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +K+     A++L SGG DS+TCL+ A D+     T++FDYGQR + EL+    V   +  
Sbjct: 1   MKEPAMKKAVVLLSGGLDSATCLAIARDQGYACHTIAFDYGQRTRSELDAAERVSGVLGA 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           L  +  +       L +  +G  + +  +  V      + +P T+VP RN +FL  A  L
Sbjct: 61  LSHRVIE-------LGMGNIGGSALTDHSIEVPENG-GDGIPVTYVPARNTVFLSLALGL 112

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKK 177
           A  +    I IGV   DYSGYPDCR   I A ++   L  +       + + TPLM L K
Sbjct: 113 AEVIDAQAIFIGVNAVDYSGYPDCRPAFIEAFQSMATLATKAGVEGRPMQIETPLMHLSK 172

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF--- 234
            +  +    +G      L    + +CY          G  C  C +C LR +G+ +    
Sbjct: 173 AQIIQRGVALG------LDYGLTVSCYQADDH-----GNACGKCDSCRLRSQGFEDALVK 221

Query: 235 -KEKYQ 239
               YQ
Sbjct: 222 DPTNYQ 227


>gi|265751135|ref|ZP_06087198.1| exsB protein [Bacteroides sp. 3_1_33FAA]
 gi|263238031|gb|EEZ23481.1| exsB protein [Bacteroides sp. 3_1_33FAA]
          Length = 223

 Score =  167 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 95/232 (40%), Positives = 132/232 (56%), Gaps = 17/232 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K+  AL++FSGGQDS+TCL WA   F +V  LSF YGQ++  E+E    +  K     
Sbjct: 1   MNKSD-ALVVFSGGQDSTTCLFWAKKHFRKVYALSFIYGQKHVKEVELARAIAGKAGVEF 59

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                S        +  L   S +  T  +      ++ PNTFVPGRN+ FL  AA  A 
Sbjct: 60  KAMDVSF-------IGNLDKNSLTDTTITMDEVKPADSFPNTFVPGRNLFFLSIAAVYAR 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            LGI +IV GV +TD+SGYPDCR   I+++   +NL M+    +HTPLMW+ K ETW LA
Sbjct: 113 ELGINHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVLHTPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            ++G   +++LI  E+ TCY G +      G GC  CPAC LR++G  ++ E
Sbjct: 173 DELG---VLDLIRHETLTCYNGVQ------GDGCGHCPACKLRREGLEKYLE 215


>gi|293365936|ref|ZP_06612639.1| transcription regulator ExsB [Streptococcus oralis ATCC 35037]
 gi|307702339|ref|ZP_07639297.1| queuosine biosynthesis protein queC [Streptococcus oralis ATCC
           35037]
 gi|291315614|gb|EFE56064.1| transcription regulator ExsB [Streptococcus oralis ATCC 35037]
 gi|307624142|gb|EFO03121.1| queuosine biosynthesis protein queC [Streptococcus oralis ATCC
           35037]
          Length = 217

 Score =  167 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 97/225 (43%), Positives = 141/225 (62%), Gaps = 19/225 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WA + ++ VE ++F YGQR+ +E++    + K+       
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWAKEHYETVEAVTFSYGQRHHLEIQVAREIAKEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL +++LG I+ ++LT ++ ++ ++  +PNTFV GRN +FL FAA LA + 
Sbjct: 57  -----IRHHILDMSLLGQITENALTSDMEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQR 111

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI +IV GVCETD+SGYPDCR   ++++   +NL M+    + TPLMWL K ETW+LA  
Sbjct: 112 GIQDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKSETWELADQ 171

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
           +   D  + + E + TCY G        G GC  CPAC+LRQ G 
Sbjct: 172 L---DAFDYVRERTLTCYNGI------IGSGCGDCPACHLRQHGL 207


>gi|290580632|ref|YP_003485024.1| putative aluminium resistance ATPase [Streptococcus mutans NN2025]
 gi|254997531|dbj|BAH88132.1| putative ATPase, confers aluminum resistance [Streptococcus mutans
           NN2025]
          Length = 217

 Score =  167 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 101/228 (44%), Positives = 144/228 (63%), Gaps = 19/228 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WA+  ++ VET++F YGQR+  ELE    +          
Sbjct: 2   KRQSALIVFSGGQDSTTCLFWAMKHYEYVETVTFSYGQRHSQELEVAKEIA--------- 52

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +   + HIL +++LG I+ ++LT ++A++ +D  +PNTFV GRN +FL FAA LA + 
Sbjct: 53  -AEQGVKHHILDMSLLGQITENALTSDIAIETKDGEVPNTFVDGRNHLFLSFAAVLAKQR 111

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I +IV GVC+TD+SGYPDCR   ++++   +NL M+    + TPLMWL K ETW+LA  
Sbjct: 112 KIRDIVTGVCQTDFSGYPDCRDVFVKSLNVTLNLAMDYEFVIQTPLMWLDKAETWELADQ 171

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           +G  D V     ++ TCY G R      G GC  CPAC+LRQ G  ++
Sbjct: 172 LGKFDYVRQ---KTLTCYNGIR------GTGCRQCPACHLRQAGLEKY 210


>gi|169632732|ref|YP_001706468.1| hypothetical protein ABSDF0931 [Acinetobacter baumannii SDF]
 gi|169151524|emb|CAP00291.1| conserved hypothetical protein; putative exported protein
           [Acinetobacter baumannii]
          Length = 227

 Score =  167 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 72/247 (29%), Positives = 110/247 (44%), Gaps = 32/247 (12%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M   ++  P A++L SGG DS+TCL+WA  R      +SF YGQR+  EL+    + ++ 
Sbjct: 1   MEKNMR--PRAIVLLSGGLDSTTCLAWAQAR-HECIAISFMYGQRSTTELDAAKALAQRA 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                           + LA LG  + +     V  ++Q+      +VP RN IFL +A 
Sbjct: 58  GVEHHVIN--------IDLANLGGSALTDHNIAVPEQLQEGIPVT-YVPARNTIFLSYAL 108

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWL 175
             A       IVIG+   DYSGYPDCR + I A      L  ++ V        TPL+ L
Sbjct: 109 AAAEVFNAEAIVIGINAVDYSGYPDCRPEFIDAFANMARLATKAGVEGKPLKFETPLLHL 168

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K    +L  + G      +   ++ +CY          G  C  C +C LR++G+++  
Sbjct: 169 SKANIIRLGIEHG------VDYSQTVSCYQAD-----AQGRACGKCDSCRLRKEGFIDAG 217

Query: 236 ----EKY 238
                +Y
Sbjct: 218 VTDPTRY 224


>gi|294626852|ref|ZP_06705444.1| ExsB protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
 gi|294665415|ref|ZP_06730703.1| ExsB protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
 gi|292598866|gb|EFF43011.1| ExsB protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
 gi|292604826|gb|EFF48189.1| ExsB protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
          Length = 224

 Score =  167 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 68/233 (29%), Positives = 101/233 (43%), Gaps = 25/233 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+  ++ A ++   V  LS  YGQR+  EL+    V      +  K  
Sbjct: 2   KKAVVLLSGGMDSAAVIALAQEQGFAVYALSVRYGQRHTSELDAAARVADAQGVVAHKVV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D       + L  +G  + +            + +P T+VP RN I L  A   A  +G 
Sbjct: 62  D-------VDLRSIGGSALTDDIDVPDAG--GDGIPVTYVPARNTIMLSLALGWAEVIGA 112

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKL 183
            ++  GV   DYSGYPDCR + +RA E   NL  ++ V      VH PL +L K +  + 
Sbjct: 113 NDLFCGVNAVDYSGYPDCRPEFVRAFEVLANLATKAGVEGAGLRVHAPLQFLSKADIVRE 172

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
              +G      +    + +CY    D     G  C  C AC LR  G+ +   
Sbjct: 173 GVRLG------VDFGLTVSCYRADAD-----GRACGHCDACRLRAAGFADAGI 214


>gi|15838456|ref|NP_299144.1| transcriptional regulator [Xylella fastidiosa 9a5c]
 gi|9106947|gb|AAF84664.1|AE004007_3 transcriptional regulator [Xylella fastidiosa 9a5c]
          Length = 254

 Score =  167 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 71/239 (29%), Positives = 99/239 (41%), Gaps = 29/239 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+   + A  +   V  LS  YGQR+  EL+  + + + +     K  
Sbjct: 26  KKAVVLLSGGMDSAVVTAIAQSQGFMVHALSIRYGQRHTSELDAAVRIARVLNVAAHKVV 85

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D       + L  +G  + +   +          +P T+VP RN I L  A   A  +G 
Sbjct: 86  D-------VDLRSIGGSALTDDIEIPDAG--GKGIPVTYVPARNTIMLSLALGWAEVIGA 136

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKL 183
            +I  GV   DYSGYPDCR   I A ET  NL  +  V      VH PL +L K E    
Sbjct: 137 ADIFCGVNAVDYSGYPDCRPQFITAFETLANLATKVGVEGTQLHVHAPLQFLSKAEIVHE 196

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKY 238
               G      +    + +CY    D     G  C  C AC LR  G+ +       +Y
Sbjct: 197 GVLHG------VDFGLTVSCYRADVD-----GRACGRCDACKLRAAGFADAGVADPTRY 244


>gi|270293085|ref|ZP_06199296.1| ExsB protein [Streptococcus sp. M143]
 gi|270279064|gb|EFA24910.1| ExsB protein [Streptococcus sp. M143]
          Length = 217

 Score =  167 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 98/227 (43%), Positives = 142/227 (62%), Gaps = 20/227 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +K+  SAL++FSGGQDS+TCL WA + +  VE ++F YGQR+ +E++    + K+     
Sbjct: 1   MKRH-SALVVFSGGQDSTTCLFWAKEHYKTVEAVTFAYGQRHHLEIQVAREIAKEQG--- 56

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     HIL +++LG I+ ++LT ++ ++ ++  +PNTFV GRN +FL FAA LA 
Sbjct: 57  -------IRHHILDMSLLGQITENALTSDMEIEQKEGEVPNTFVDGRNHLFLSFAAVLAK 109

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           +  I +IV GVCETD+SGYPDCR   ++++   +NL M+    + TPLMWL K ETW+LA
Sbjct: 110 QRDIKDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWELA 169

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
             +G  D V    E++ TCY G        G GC  CPAC+LRQ G 
Sbjct: 170 DQLGAFDYVR---EKTLTCYNGI------IGSGCGDCPACHLRQHGL 207


>gi|212635181|ref|YP_002311706.1| ExsB protein [Shewanella piezotolerans WP3]
 gi|254764384|sp|B8CM62|QUEC_SHEPW RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|212556665|gb|ACJ29119.1| ExsB [Shewanella piezotolerans WP3]
          Length = 228

 Score =  167 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 97/235 (41%), Positives = 146/235 (62%), Gaps = 23/235 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E+E    +  K+     +   
Sbjct: 3   KAIVVFSGGQDSTTCLIQALTQYDEVHCVTFDYGQRHRQEIEIAKELSSKLGASSHQ--- 59

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL--PNTFVPGRNIIFLVFAATLAYRLG 127
                 +L + IL D++ S+LT+++ ++   +    PNTFVPGRNI+FL  A   AY++ 
Sbjct: 60  ------VLDVGILNDLTVSALTRDIPIEENKDGNAIPNTFVPGRNILFLTLAGIYAYQIN 113

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ GVCETD+SGYPDCR++ I++++TA+  GM+  +T+ TPLMWL K ETW LA   
Sbjct: 114 ADVIITGVCETDFSGYPDCRNEFIKSMQTALMQGMDKQLTISTPLMWLDKAETWALADK- 172

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK---YQ 239
              + + L+  ++ TCY G +      G GC +CPAC LRQ+G  E+      YQ
Sbjct: 173 --YNSLELVRHQTLTCYNGLK------GDGCGTCPACILRQRGLDEYLANSTMYQ 219


>gi|219871540|ref|YP_002475915.1| queuosine biosynthesis protein QueC [Haemophilus parasuis SH0165]
 gi|254764350|sp|B8F6L5|QUEC_HAEPS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|219691744|gb|ACL32967.1| queuosine biosynthesis protein QueC [Haemophilus parasuis SH0165]
          Length = 219

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 91/235 (38%), Positives = 137/235 (58%), Gaps = 22/235 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +K  P A+++FSGGQDS+TCL  A+  F  + VE ++F YGQR+ +EL+    + + +  
Sbjct: 1   MKPTPKAVVIFSGGQDSTTCLFLAIKEFGKENVEVVTFQYGQRHAIELDKARWIAQDLG- 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     +  ++  +++  I+ ++L  + A   Q  N PNTFV GRN +FL++ A  
Sbjct: 60  ---------VKQTLIDTSVIKAITTNALMDDQAEIKQTGNTPNTFVDGRNALFLLYTAIY 110

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A   GI  I  GVCETD+SGYPDCR   I+++   +NL M+ +  + TPLM+L K ETW 
Sbjct: 111 AKSQGIQTIYTGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYNFNIRTPLMYLTKKETWA 170

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           LA  +G     + I   +HTCYLG          GC++CP+C LR+KG  E+ E+
Sbjct: 171 LADQLGAF---DYIRTHTHTCYLGVEG-------GCHTCPSCLLREKGLNEYLEE 215


>gi|120598963|ref|YP_963537.1| queuosine biosynthesis protein QueC [Shewanella sp. W3-18-1]
 gi|146292952|ref|YP_001183376.1| queuosine biosynthesis protein QueC [Shewanella putrefaciens CN-32]
 gi|120559056|gb|ABM24983.1| exsB protein [Shewanella sp. W3-18-1]
 gi|145564642|gb|ABP75577.1| exsB protein [Shewanella putrefaciens CN-32]
 gi|319426519|gb|ADV54593.1| exsB protein [Shewanella putrefaciens 200]
          Length = 245

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 94/231 (40%), Positives = 147/231 (63%), Gaps = 21/231 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E+E    + K++         
Sbjct: 18  KAVVVFSGGQDSTTCLIQALTQYDEVHGITFDYGQRHREEIEVAKSLAKRL--------- 68

Query: 70  SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +    ++ + +L +++ S+LT++   V+ ++ +N LPNTFVPGRNI+FL  A   AY+L
Sbjct: 69  KITSHKVMDVTLLNELAISALTRDAIPVSHELMENGLPNTFVPGRNILFLTLAGIYAYQL 128

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   I+ GVCETD+SGYPDCR+D ++A+E+A+  GM+  + + TPLMWL K +TW LA  
Sbjct: 129 GAEAIITGVCETDFSGYPDCRNDFVKAMESALVQGMDKQLKIITPLMWLNKAQTWALADK 188

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                 ++L+   + TCY G        G GC  CPAC+LR++G  ++ + 
Sbjct: 189 ---YQQLDLVRHHTLTCYNG------VIGDGCGDCPACHLRKRGLDDYLQN 230


>gi|108758889|ref|YP_634541.1| exsB protein [Myxococcus xanthus DK 1622]
 gi|118574291|sp|Q1CYI2|QUEC_MYXXD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|108462769|gb|ABF87954.1| exsB protein [Myxococcus xanthus DK 1622]
          Length = 230

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 79/247 (31%), Positives = 114/247 (46%), Gaps = 36/247 (14%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+TCL+ A  +      L+  YGQR+ VELE    V   +      
Sbjct: 1   MVKRAVVLISGGLDSTTCLAMAKAKGFEPVCLAVAYGQRHAVELEQARKVAAAMG----- 55

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKI------QDNNLPNTFVPGRNIIFLVFAA 120
                  D  +    L  +  S+LT ++ +          + +P T+VP RN +FL  A 
Sbjct: 56  -----VTDFRVVSIDLRQVGGSALTADIEVPKDRPSDEMSHGIPVTYVPARNALFLSLAL 110

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWL 175
            LA  +G T+I IGV   DYSGYPDCR + IR+ E+  NL  +     +H TVH PL  L
Sbjct: 111 GLAEVVGSTDIYIGVNAVDYSGYPDCRPEFIRSFESMANLATKAGVEGAHFTVHAPLSGL 170

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K +  +    +G      +    +H+CY          G  C  C +C LR+KG+ E  
Sbjct: 171 TKADIIREGVKLG------VDYGLTHSCYDPD-----AQGRACGRCDSCVLRKKGFEEAG 219

Query: 236 ----EKY 238
                +Y
Sbjct: 220 VPDPTRY 226


>gi|304408668|ref|ZP_07390289.1| exsB protein [Shewanella baltica OS183]
 gi|307305497|ref|ZP_07585245.1| exsB protein [Shewanella baltica BA175]
 gi|304352489|gb|EFM16886.1| exsB protein [Shewanella baltica OS183]
 gi|306911800|gb|EFN42225.1| exsB protein [Shewanella baltica BA175]
          Length = 249

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 96/240 (40%), Positives = 150/240 (62%), Gaps = 24/240 (10%)

Query: 1   MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           M+  +   P    A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E+E    + 
Sbjct: 10  MSTSLVSKPLASKAVVVFSGGQDSTTCLIQALTQYDEVHGITFDYGQRHREEIEVAKSLA 69

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNII 114
           K++          +    ++ + +L +++ S+LT++   V+ ++ +N LPNTFVPGRNI+
Sbjct: 70  KRL---------KITSHKVMDVTLLNELAISALTRDAIPVSHELMENGLPNTFVPGRNIL 120

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
           FL  A   AY+LG   I+ GVCETD+SGYPDCR+D ++A+E+A+  GM+  + + TPLMW
Sbjct: 121 FLTLAGIYAYQLGAEAIITGVCETDFSGYPDCRNDFVKAMESALVQGMDKQLKIITPLMW 180

Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           L K +TW LA        ++L+   + TCY G        G GC  CPAC+LR++G  ++
Sbjct: 181 LNKAQTWALADK---YQQLDLVRHHTLTCYNG------VIGDGCGDCPACHLRKRGLDDY 231


>gi|229917716|ref|YP_002886362.1| exsB protein [Exiguobacterium sp. AT1b]
 gi|259551529|sp|C4L0V4|QUEC_EXISA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|229469145|gb|ACQ70917.1| exsB protein [Exiguobacterium sp. AT1b]
          Length = 214

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 98/230 (42%), Positives = 136/230 (59%), Gaps = 20/230 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   AL++FSGGQDS+TCL WA  +F  VE ++F YGQR+  E+E    +  ++      
Sbjct: 2   QHEKALVVFSGGQDSTTCLFWAKQQFSHVEAVTFAYGQRHDAEIEVAKEIAAELD----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL L++LG ++ ++LT++       +   NTFV GRN +FL FAA +A +L
Sbjct: 57  -----VPHHILDLSLLGQLTSNALTRHDLDIDNADVP-NTFVDGRNHLFLSFAAVMAKQL 110

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G+ +IV GVCETD+SGYPDCR   I+++   +NL M+    + TPLMWL K ETW LA +
Sbjct: 111 GMHHIVTGVCETDFSGYPDCRDQFIKSLNVTLNLAMDYPFVIDTPLMWLDKKETWALADE 170

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           +G  D V    E + TCY G        G GC  CPAC LRQ G   ++E
Sbjct: 171 LGAFDYVK---ERTLTCYNG------VIGSGCGECPACKLRQNGLTAYEE 211


>gi|304408386|ref|ZP_07390033.1| exsB protein [Paenibacillus curdlanolyticus YK9]
 gi|304342675|gb|EFM08522.1| exsB protein [Paenibacillus curdlanolyticus YK9]
          Length = 240

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 75/252 (29%), Positives = 122/252 (48%), Gaps = 40/252 (15%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D   K   A+++ SGG DS+TC+ +A +    +  L+FDYGQR+++ELE    V +  
Sbjct: 1   MAD--NKNKKAVIILSGGLDSTTCMGFAKEAGYELFPLTFDYGQRHRIELEKSRQVAEHY 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT------------KNVAMKIQDNNLPNTFV 108
                     +    ++ L  L +I  S+LT            + + ++  ++ +P T+V
Sbjct: 59  GV--------IDRYKVIKLDFLRNIGGSALTDEAIAVPKGTGVEQMDVEQAESEIPVTYV 110

Query: 109 PGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME----- 163
           PGRN +FL  A + A  +G   I IGV   DYSGYPDCR + I  +E  + L  +     
Sbjct: 111 PGRNFMFLAIATSYAEAVGAEAIYIGVNALDYSGYPDCRPEFIAKVEEVMALATKVGVEG 170

Query: 164 SHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPA 223
             +++ TPL+ L K +  +    +G      +  E + +CY G+ +        C  C +
Sbjct: 171 KPISIETPLIALSKADIVREGVRMG------VPYELTTSCYNGEEE-------ACGECDS 217

Query: 224 CYLRQKGWMEFK 235
           C LR KG+ E  
Sbjct: 218 CVLRLKGFSEAG 229


>gi|32475312|ref|NP_868306.1| transcription regulator [Rhodopirellula baltica SH 1]
 gi|81658063|sp|Q7UFU6|QUEC_RHOBA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|32445853|emb|CAD78584.1| probable transcription regulator [Rhodopirellula baltica SH 1]
          Length = 250

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 75/234 (32%), Positives = 111/234 (47%), Gaps = 25/234 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DS+TC++ A D+   V  +SF YGQR+  EL+        +  +  +  D
Sbjct: 23  KAVVLLSGGLDSATCVAIARDQGFEVHAISFRYGQRHDGELDRAAKQASLMGVVSHRVID 82

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQ----DNNLPNTFVPGRNIIFLVFAATLAYR 125
                  + LA LG  +    +  V           ++P T+VP RN IFL +A  +A  
Sbjct: 83  -------IDLAQLGGSALVDSSIAVPKSDHVDKIAGDIPVTYVPARNTIFLSYALAVAET 135

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPLMWLKKYE 179
           LG  +I IGV   DYSGYPDCR + I A +T   L  ++ V       +HTPL+   K E
Sbjct: 136 LGSRDIFIGVNALDYSGYPDCRPEFIDAFQTMARLATKAGVEDEHSLTIHTPLLHWTKAE 195

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
             +   ++G      +   ++ +CY        +    C  C AC LR KG+ E
Sbjct: 196 IIQRGIELG------VDYSQTLSCYDP--QGSSDEMRPCGQCDACLLRAKGFAE 241


>gi|224372822|ref|YP_002607194.1| ExsB protein [Nautilia profundicola AmH]
 gi|254764361|sp|B9L986|QUEC_NAUPA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|223588633|gb|ACM92369.1| ExsB protein [Nautilia profundicola AmH]
          Length = 222

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/235 (28%), Positives = 106/235 (45%), Gaps = 28/235 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR-LCVRKKIVELMPKW 67
             A+++ SGG DS+T    A      +  + F+Y QR +         +   +       
Sbjct: 2   KKAVVILSGGMDSTTAAFIAKSEGYEIIPVHFNYSQRTEKRELKAFNDICDYL------- 54

Query: 68  KDSLGEDHILPLAILGDISHSS---LTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             +L   +I+ +     I  S+      +V +      +P T+VP RN IFL  AA +A 
Sbjct: 55  --NLDNRYIIDIPFFKQIGASALVDENIDVPVDGVKPGIPVTYVPFRNGIFLSIAAAVAE 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWK 182
           + G   I IGV E D SGYPDC  D I+ ++ A+N G +   ++ + TPL+ LKK +  K
Sbjct: 113 KEGAEAIYIGVVEEDSSGYPDCTEDFIQNMQKAVNSGTKPETNIEIKTPLVHLKKEDIVK 172

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            A         N+ L  + +CY  + +        C  C +C LR KG+ +   +
Sbjct: 173 TAVKY------NVPLHLTWSCYKNEDE-------ACGVCDSCRLRLKGFEKAGIE 214


>gi|189029590|sp|A1RJY8|QUEC_SHESW RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|189029599|sp|A4Y6J4|QUEC_SHEPC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
          Length = 240

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 94/231 (40%), Positives = 147/231 (63%), Gaps = 21/231 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E+E    + K++         
Sbjct: 13  KAVVVFSGGQDSTTCLIQALTQYDEVHGITFDYGQRHREEIEVAKSLAKRL--------- 63

Query: 70  SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +    ++ + +L +++ S+LT++   V+ ++ +N LPNTFVPGRNI+FL  A   AY+L
Sbjct: 64  KITSHKVMDVTLLNELAISALTRDAIPVSHELMENGLPNTFVPGRNILFLTLAGIYAYQL 123

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   I+ GVCETD+SGYPDCR+D ++A+E+A+  GM+  + + TPLMWL K +TW LA  
Sbjct: 124 GAEAIITGVCETDFSGYPDCRNDFVKAMESALVQGMDKQLKIITPLMWLNKAQTWALADK 183

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                 ++L+   + TCY G        G GC  CPAC+LR++G  ++ + 
Sbjct: 184 ---YQQLDLVRHHTLTCYNG------VIGDGCGDCPACHLRKRGLDDYLQN 225


>gi|119367947|sp|Q0VRI8|QUEC_ALCBS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
          Length = 222

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 72/240 (30%), Positives = 108/240 (45%), Gaps = 28/240 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+TCL+ A D+     T++FDYGQR + EL+    V   +  L  +  
Sbjct: 2   KKAVVLLSGGLDSATCLAIARDQGYACHTIAFDYGQRTRSELDAAERVSGVLGALSHRVI 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +       L +  +G  + +  +  V      + +P T+VP RN +FL  A  LA  +  
Sbjct: 62  E-------LGMGNIGGSALTDHSIEVPENG-GDGIPVTYVPARNTVFLSLALGLAEVIDA 113

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKL 183
             I IGV   DYSGYPDCR   I A ++   L  +       + + TPLM L K +  + 
Sbjct: 114 QAIFIGVNAVDYSGYPDCRPAFIEAFQSMATLATKAGVEGRPMQIETPLMHLSKAQIIQR 173

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF----KEKYQ 239
              +G      L    + +CY          G  C  C +C LR +G+ +        YQ
Sbjct: 174 GVALG------LDYGLTVSCYQADDH-----GNACGKCDSCRLRSQGFEDALVKDPTNYQ 222


>gi|295695131|ref|YP_003588369.1| exsB protein [Bacillus tusciae DSM 2912]
 gi|295410733|gb|ADG05225.1| exsB protein [Bacillus tusciae DSM 2912]
          Length = 240

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 65/242 (26%), Positives = 109/242 (45%), Gaps = 31/242 (12%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  +A  A+++ SGG DS+TC++ A      +  ++F YGQ++ VELE    V       
Sbjct: 1   MEHRALRAVVILSGGLDSTTCMAIADHEGYELYPITFSYGQKHAVELESAKQVAAHYRV- 59

Query: 64  MPKWKDSLGEDHILPLAIL---GDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVF 118
                       ++ L        ++    +  V   +++    +P+T+VPGRN +FL  
Sbjct: 60  -------GDRHRVVDLGNFIRGSSLTDPDQSIPVGRSLEEIGTGVPSTYVPGRNTVFLSL 112

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLM 173
           A + A R+    I IGV   DYSGYPDCR + ++A +  I+ G       + + +  PL+
Sbjct: 113 ALSFAERIDAQAIFIGVNALDYSGYPDCRPEFLQAFQRVIDTGTVAGTEGAGIRLKAPLV 172

Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
            L K E  +    +G           +H+CY G           C  C +C +R +G+ E
Sbjct: 173 HLTKAEIIRRGSQLGA------PYALTHSCYQGTVP-------ACGVCDSCRIRIQGFRE 219

Query: 234 FK 235
             
Sbjct: 220 AG 221


>gi|289661975|ref|ZP_06483556.1| ExsB protein [Xanthomonas campestris pv. vasculorum NCPPB702]
 gi|289667005|ref|ZP_06488080.1| ExsB protein [Xanthomonas campestris pv. musacearum NCPPB4381]
          Length = 224

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 68/232 (29%), Positives = 101/232 (43%), Gaps = 25/232 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+  ++ A ++   V  LS  YGQR+  EL+    V      +  K  
Sbjct: 2   KKAVVLLSGGMDSAAVIALAQEQGFAVYALSVRYGQRHTSELDAATRVAAAQGVIAHKVV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D       + L  +G  + +            + +P T+VP RN I L  A   A  +G 
Sbjct: 62  D-------VDLRSIGGSALTDDIDVPDAG--GDGIPVTYVPARNTIMLSLALGWAEVVGA 112

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKL 183
            ++  GV   DYSGYPDCR + +RA E   NL  ++ V      VH PL +L K +  + 
Sbjct: 113 NDLFCGVNAVDYSGYPDCRPEFVRAFEVLANLATKAGVEGAGLRVHAPLQFLSKADIVRE 172

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
              +G      +    + +CY    D     G  C  C AC LR  G+ +  
Sbjct: 173 GVRLG------VDFGLTVSCYRADAD-----GRACGHCDACRLRAAGFADAG 213


>gi|253997440|ref|YP_003049504.1| exsB protein [Methylotenera mobilis JLW8]
 gi|253984119|gb|ACT48977.1| exsB protein [Methylotenera mobilis JLW8]
          Length = 226

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 67/242 (27%), Positives = 105/242 (43%), Gaps = 28/242 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +A++L SGG DS+T L++A  +      LS DY QR+  EL+    V K +     K
Sbjct: 1   MTKNAVVLLSGGLDSATVLAYARSQGFECYCLSLDYHQRHIAELQAAKNVAKVMGAAAHK 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     L L++ G  + +     V +   +      +VP RN I L  A   A  L
Sbjct: 61  TAQ-------LDLSLFGGSALTDDAIAVPVSATEGIPIT-YVPARNTIMLSLALAWAEVL 112

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETW 181
              +I IGV   DYSGYPDCR + ++A +   NL  +       +T+H PL+ + K +  
Sbjct: 113 QAQDIFIGVNALDYSGYPDCRGEYVKAFQDMANLATKSAVEGKTITIHAPLIDMTKAQIV 172

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EK 237
            L  ++G      +    + +CY          G  C  C +C LR+ G+         +
Sbjct: 173 TLGTELG------VDYAMTVSCYQAD-----SEGEACGLCDSCRLRRDGFFAAGLADPTR 221

Query: 238 YQ 239
           Y+
Sbjct: 222 YK 223


>gi|327540919|gb|EGF27477.1| trans-regulatory protein ExsB [Rhodopirellula baltica WH47]
          Length = 245

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 75/234 (32%), Positives = 110/234 (47%), Gaps = 25/234 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DS+TC++ A D+   V  +SF YGQR+  EL+        +  +  +  D
Sbjct: 18  KAVVLLSGGLDSATCVAIARDQGFEVHAISFRYGQRHDGELDRAAKQASLMGVVTHRVID 77

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQ----DNNLPNTFVPGRNIIFLVFAATLAYR 125
                  + LA LG  +    +  V           ++P T+VP RN IFL +A  +A  
Sbjct: 78  -------IDLAQLGGSALVDSSIAVPKSDHVDKIAGDIPVTYVPARNTIFLSYALAVAET 130

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPLMWLKKYE 179
           LG  +I IGV   DYSGYPDCR + I A +T   L  ++ V       +HTPL+   K E
Sbjct: 131 LGSRDIFIGVNALDYSGYPDCRPEFINAFQTMARLATKAGVEDEHSLTIHTPLLHWTKAE 190

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
             +   ++G      +   ++ +CY             C  C AC LR KG+ E
Sbjct: 191 IIQRGIELG------VDYSQTLSCYDP--QGSNAEMRPCGQCDACLLRAKGFAE 236


>gi|165924029|ref|ZP_02219861.1| queuosine biosynthesis protein QueC [Coxiella burnetii RSA 334]
 gi|165916514|gb|EDR35118.1| queuosine biosynthesis protein QueC [Coxiella burnetii RSA 334]
          Length = 226

 Score =  166 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 73/234 (31%), Positives = 109/234 (46%), Gaps = 23/234 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+TCL+ A  +      LSFDYGQ++  EL     +      +  +  
Sbjct: 2   KKAVILISGGLDSTTCLAVAKSKGFACYALSFDYGQKHHSELVAAEKIAAHFNVVRYEVV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L +  LG  + +  + +V     + ++P T+VP RN IFL  A   A  L  
Sbjct: 62  -------TLSIGKLGGSALTDNSLDVPDYGGNESIPITYVPARNTIFLSIALGWAEILDA 114

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKL 183
            +I+IG    DYSGYPDCR + I A +   NL  +       + +  PL+ L K ET KL
Sbjct: 115 ESILIGASAIDYSGYPDCRPEYIAAFQNLANLATQRGIEGHSIKIEAPLIHLSKAETIKL 174

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
              +G      +    + +CY    +     G  C  C +C LR+KG+ E + K
Sbjct: 175 GYSLG------VDYSMTVSCYRANEE-----GLACGYCDSCELRKKGFKEAEIK 217


>gi|317492902|ref|ZP_07951326.1| exsB protein [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919024|gb|EFV40359.1| exsB protein [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 246

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 95/234 (40%), Positives = 137/234 (58%), Gaps = 20/234 (8%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K    A+++FSGGQDS+TCL  ALD++D V  ++FDYGQR++ E++    +  K+     
Sbjct: 17  KAMKRAVVVFSGGQDSTTCLIQALDQYDEVHCITFDYGQRHRAEIDVARDLAIKLGASA- 75

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                     +L + +L +++ SSLT++        ++ +PNTFVPGRNI+FL  AA  A
Sbjct: 76  --------HKVLDVGLLNELAISSLTRDNIPVPTESEDGIPNTFVPGRNILFLTLAAIYA 127

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           Y++    ++ GVCETD+SGYPDCR + ++A+  AI LGM   V   TPLMWL K ETW L
Sbjct: 128 YQVQAEAVITGVCETDFSGYPDCRDEFVKALNKAITLGMARDVRFETPLMWLNKAETWAL 187

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           A        ++L+  E+ TCY G +      G GC  C AC+LR  G  E+   
Sbjct: 188 ADH---YQKLDLVRRETLTCYNGIQ------GDGCGECAACHLRSHGLNEYLAN 232


>gi|222150715|ref|YP_002559868.1| ExsB protein [Macrococcus caseolyticus JCSC5402]
 gi|222119837|dbj|BAH17172.1| ExsB protein [Macrococcus caseolyticus JCSC5402]
          Length = 222

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 91/237 (38%), Positives = 151/237 (63%), Gaps = 22/237 (9%)

Query: 5   IKK--APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +K+  +  AL++FSGGQDS+TC+ +A+  +D VE ++F+YGQR+ +E++    + ++   
Sbjct: 1   MKQLNSNKALVVFSGGQDSTTCMFYAMHHYDEVELVTFNYGQRHALEIDIAKQIAEEQG- 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     + H+L +++L  +S ++LT +  + I++N++PNTFVP RN++F+ FAA L
Sbjct: 60  ---------LKHHVLDMSLLSQLSPNALTHH-DLTIENNDIPNTFVPARNLLFMSFAAAL 109

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           AY++   +I+ GVCETD+SGYPDCR + I+++   INL M+ +  +HTPLMWL K ETW 
Sbjct: 110 AYQINAKHIITGVCETDFSGYPDCRDNFIKSLNVTINLSMDLNFEIHTPLMWLDKKETWA 169

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           LA  +G    ++ I  ++ TCY G          GC  CP+C LR  G  ++ ++ +
Sbjct: 170 LADTLGQ---LDYIRNKTLTCYNGIP------ADGCGECPSCKLRNNGLNQYLQEKE 217


>gi|283853630|ref|ZP_06370865.1| exsB protein [Desulfovibrio sp. FW1012B]
 gi|283570992|gb|EFC19017.1| exsB protein [Desulfovibrio sp. FW1012B]
          Length = 233

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 80/248 (32%), Positives = 113/248 (45%), Gaps = 31/248 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +   P A++LFSGG DS+TCL+ A         LSF+YGQR+ VEL     V   +    
Sbjct: 1   MTAQPKAVVLFSGGLDSTTCLAVARSEGFLPCALSFEYGQRHSVELLAARRVAAALDVHA 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                       LPL  +G  + ++      +      +  +P T+VP RN IFL  A  
Sbjct: 61  HLILP-------LPLGAIGGSALTADIDVPKDRDPATMETEIPATYVPARNTIFLSLALG 113

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES------HVTVHTPLMWL 175
            A  LG  +I IGV   DYSGYPDCR   I A E   NL ++        + +HTPL+ L
Sbjct: 114 WAEVLGAEDIFIGVNALDYSGYPDCRPQFIAAFEAMANLAVKEAVEGRLRIRIHTPLLHL 173

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF- 234
            K    +L   +G      +    +H+CY    +     G  C  C +C LR+KG+ E  
Sbjct: 174 TKAGIVRLGTSLG------VDFGLTHSCYDPTEE-----GLACGRCDSCLLRKKGFEEAD 222

Query: 235 ---KEKYQ 239
                +Y+
Sbjct: 223 IQDPTRYR 230


>gi|333030899|ref|ZP_08458960.1| exsB protein [Bacteroides coprosuis DSM 18011]
 gi|332741496|gb|EGJ71978.1| exsB protein [Bacteroides coprosuis DSM 18011]
          Length = 217

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 92/233 (39%), Positives = 132/233 (56%), Gaps = 19/233 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   A++LFSGGQDS+TCL WA  RFD+V  +SFDYGQ++  E++    + ++       
Sbjct: 2   RNSKAIVLFSGGQDSTTCLYWAKKRFDKVYAISFDYGQKHSNEVDVARSIAQQAN----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 E  +L    +  +S ++LT       ++NN PNTFVPGRN+ FL  AA  A+  
Sbjct: 57  -----VEFIVLDAHYISQLSINALTDTSLEMDENNNCPNTFVPGRNLFFLSMAAVFAFEH 111

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            + +IV GV +TD+SGYPDCRH+ I++    +NL M+    +H PLMWL K   W+L+  
Sbjct: 112 DVQHIVTGVSQTDFSGYPDCRHNFIQSANLTLNLAMDKEFILHAPLMWLDKAGVWELSDK 171

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           +G  DLV    + + TCY G          GC  CPAC LR +G  E+  K +
Sbjct: 172 LGVFDLVK---DHTLTCYNG------VIAEGCGHCPACKLRNQGLQEYLLKRE 215


>gi|332709791|ref|ZP_08429748.1| preQ(0) biosynthesis protein QueC [Lyngbya majuscula 3L]
 gi|332351389|gb|EGJ30972.1| preQ(0) biosynthesis protein QueC [Lyngbya majuscula 3L]
          Length = 228

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 69/238 (28%), Positives = 106/238 (44%), Gaps = 29/238 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +   ++L SGG DS+T L  ++        LSFDY QR++ EL+    +         +
Sbjct: 1   MSKKVIVLLSGGLDSATVLYQSVGDGYECYALSFDYQQRHRRELKSAYAIATAAGVKEHQ 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATL 122
                       L   G  + +    ++      +     +P T+VP RN IFL F  + 
Sbjct: 61  VV-------RFDLRQWGGSALTDDNLDLPKERSLEQMSQEIPITYVPARNTIFLSFGLSY 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKK 177
           A  +G   + +GV   DYSGYPDCR D I+A++TA +LG +       + + TPL+ LKK
Sbjct: 114 AEAIGAEGVYVGVNALDYSGYPDCRPDYIKAMQTAFDLGTKQGREGNGIKIFTPLIDLKK 173

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            E  +L   +G      +  E++ +CY G           C  C AC LR   + E  
Sbjct: 174 TEIIQLGNQLG------VPWEKTWSCYTGND-------LACGVCDACRLRLAAFAELG 218


>gi|326564201|gb|EGE14437.1| ExsB family protein [Moraxella catarrhalis 12P80B1]
 gi|326565800|gb|EGE15962.1| ExsB family protein [Moraxella catarrhalis BC1]
 gi|326571136|gb|EGE21160.1| ExsB family protein [Moraxella catarrhalis BC7]
 gi|326575674|gb|EGE25597.1| ExsB family protein [Moraxella catarrhalis CO72]
 gi|326577140|gb|EGE27034.1| ExsB family protein [Moraxella catarrhalis O35E]
          Length = 232

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 82/251 (32%), Positives = 120/251 (47%), Gaps = 35/251 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +    +A++LFSGG DS+TCL WA  +F  V  +SF YGQR+  EL     + KK+    
Sbjct: 1   MNNNQNAVVLFSGGLDSTTCLYWAKSQFKTVTAVSFCYGQRHSSELHAAQNIAKKLSVRH 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ-------DNNLPNTFVPGRNIIFLV 117
                       + +A LG  + + +  +V    +       D   P T+VP RN IFL 
Sbjct: 61  HVID--------IDIAKLGGSALTDMNLSVPNHDESVTYSDADQVAPITYVPARNTIFLS 112

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG-----MESHVTVHTPL 172
           +A  +A     + I+IGV   DYSGYPDCR D I A ET  NL        +H+++  PL
Sbjct: 113 YALAVAEVTQASAIIIGVSSVDYSGYPDCRPDYIAAFETMANLATVSGRQGNHLSIIAPL 172

Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
             L K +T  L   +G      +    + +CY          G  C  C +C+LR++G+M
Sbjct: 173 QNLSKADTLTLGISLG------VDYSMTVSCYQAD-----ALGRACGHCDSCHLRRQGFM 221

Query: 233 EFK----EKYQ 239
           + K     +YQ
Sbjct: 222 DAKIADPTRYQ 232


>gi|226952146|ref|ZP_03822610.1| ExsB family protein [Acinetobacter sp. ATCC 27244]
 gi|294651042|ref|ZP_06728381.1| trans-regulatory protein ExsB [Acinetobacter haemolyticus ATCC
           19194]
 gi|226837108|gb|EEH69491.1| ExsB family protein [Acinetobacter sp. ATCC 27244]
 gi|292823055|gb|EFF81919.1| trans-regulatory protein ExsB [Acinetobacter haemolyticus ATCC
           19194]
          Length = 226

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 72/241 (29%), Positives = 109/241 (45%), Gaps = 28/241 (11%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M + ++    A++L SGG DS+TCL+WA  R      +SF YGQR+  EL+    + ++ 
Sbjct: 1   MENNMRS--RAIVLLSGGLDSTTCLAWAQAR-YDCVAISFMYGQRSTTELDAAKALAQRA 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                           + L  LG  + +    +V  ++Q+      +VP RN IFL +A 
Sbjct: 58  GVEHRVIN--------IDLGNLGGSALTDHNIDVPEQLQEGIPVT-YVPARNTIFLSYAL 108

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWL 175
             A       IVIGV   DYSGYPDCR + I A      L  ++ V      + TPL+ L
Sbjct: 109 AAAEVFDAEAIVIGVNAVDYSGYPDCRPEFIDAFANLARLATKAGVEGKPLKIETPLLHL 168

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K    +L  + G      +   ++ +CY          G  C  C +C LRQ+G++E  
Sbjct: 169 SKANIIRLGIEHG------VDYSQTVSCYQAD-----AQGRACGKCDSCRLRQQGFIEAG 217

Query: 236 E 236
            
Sbjct: 218 I 218


>gi|110816223|sp|Q83A28|QUEC_COXBU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
          Length = 226

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 73/234 (31%), Positives = 109/234 (46%), Gaps = 23/234 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+TCL+ A  +      LSFDYGQ++  EL     +      +  +  
Sbjct: 2   KKAVILISGGLDSTTCLAVAKSKGFSCYALSFDYGQKHHSELVAAEKIAAHFNVVRYEVV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L +  LG  + +  + +V     + ++P T+VP RN IFL  A   A  L  
Sbjct: 62  -------TLSIGKLGGSALTDNSLDVPDYGGNESIPITYVPARNTIFLSIALGWAEILDA 114

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKL 183
            +I+IG    DYSGYPDCR + I A +   NL  +       + +  PL+ L K ET KL
Sbjct: 115 ESILIGASAIDYSGYPDCRPEYIAAFQNLANLATKRGIEGHSIKIEAPLIHLSKAETIKL 174

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
              +G      +    + +CY    +     G  C  C +C LR+KG+ E + K
Sbjct: 175 GYSLG------VDYSMTVSCYRANEE-----GLACGYCDSCELRKKGFKEAEIK 217


>gi|300112862|ref|YP_003759437.1| exsB protein [Nitrosococcus watsonii C-113]
 gi|299538799|gb|ADJ27116.1| exsB protein [Nitrosococcus watsonii C-113]
          Length = 224

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 69/233 (29%), Positives = 104/233 (44%), Gaps = 24/233 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           AP A++L SGG DS+T L+ A ++     TLSF+YGQR+ VEL+    + +++  +  K 
Sbjct: 3   APKAVVLVSGGLDSATVLAIAREQAFICHTLSFNYGQRHSVELQAAAEISRQMGAVEHKC 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    + L   G  + +  +  V            +VP RN +FL FA   A  LG
Sbjct: 63  -------ITIDLGGFGGSALTDPSMAVPEASTGTIPIT-YVPARNTVFLSFALGWAEVLG 114

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWK 182
             +I IGV   DYSGYPDCR   I+A E    L            +  PL+ L K +  +
Sbjct: 115 AQDIFIGVNAVDYSGYPDCRPAFIKAFEQLAKLATCAGLEGRSFRIQAPLLPLSKADIIR 174

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
               +G      +    + +CY          G  C  C +C LR++G+ +  
Sbjct: 175 EGMRLG------VNYSRTISCYQADE-----NGRACGVCDSCRLRKQGFWDAG 216


>gi|164685855|ref|ZP_01945726.2| queuosine biosynthesis protein QueC [Coxiella burnetii 'MSU Goat
           Q177']
 gi|189038912|sp|A9KDD3|QUEC_COXBN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|164601372|gb|EAX33605.2| queuosine biosynthesis protein QueC [Coxiella burnetii 'MSU Goat
           Q177']
          Length = 226

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 73/234 (31%), Positives = 109/234 (46%), Gaps = 23/234 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+TCL+ A  +      LSFDYGQ++  EL     +      +  +  
Sbjct: 2   KKAVILISGGLDSTTCLAVAKSKGFACYALSFDYGQKHHSELVAAEKIAAHFNVVRYEVV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L +  LG  + +  + +V     + ++P T+VP RN IFL  A   A  L  
Sbjct: 62  -------TLSIGKLGGSALTDNSLDVPDYGGNESIPITYVPARNTIFLSIALGWAEILDA 114

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKL 183
            +I+IG    DYSGYPDCR + I A +   NL  +       + +  PL+ L K ET KL
Sbjct: 115 ESILIGASAIDYSGYPDCRPEYIAAFQNLANLATKRGIEGHSIKIEAPLIHLSKAETIKL 174

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
              +G      +    + +CY    +     G  C  C +C LR+KG+ E + K
Sbjct: 175 GYSLG------VDYSMTVSCYRANEE-----GLACGYCDSCELRKKGFKEAEIK 217


>gi|307293825|ref|ZP_07573669.1| exsB protein [Sphingobium chlorophenolicum L-1]
 gi|306879976|gb|EFN11193.1| exsB protein [Sphingobium chlorophenolicum L-1]
          Length = 230

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 69/238 (28%), Positives = 100/238 (42%), Gaps = 25/238 (10%)

Query: 4   IIKKAPS-ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           ++  +   A++L SGG DS      A +   RV  LS DY QR+++EL     V   +  
Sbjct: 1   MVANSGKFAVVLLSGGLDSMVAGGLAREAGYRVLALSIDYNQRHRLELRAAGRVAAALNA 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +             L L   G  + ++    V        +P T+VP RN IFL     L
Sbjct: 61  ISHIVLP-------LDLTAFGGSALTAD-IAVPKGGVGPGIPVTYVPARNTIFLSLTLGL 112

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKK 177
           A   G  ++ IGV   DYSGYPDCR + I A +    L  +       + ++ PL  + K
Sbjct: 113 AEVAGANDVFIGVNALDYSGYPDCRPEFIDAFQKMAALATKAGVEGHPIRINAPLQHMSK 172

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            +  + A  +G      L    S +CY          G  C  C +C LR KG+ME  
Sbjct: 173 ADIVREAHRLG------LDAGLSWSCYDP-----TPDGKHCGQCDSCRLRSKGFMEAG 219


>gi|238788015|ref|ZP_04631811.1| Queuosine biosynthesis protein queC [Yersinia frederiksenii ATCC
           33641]
 gi|238723963|gb|EEQ15607.1| Queuosine biosynthesis protein queC [Yersinia frederiksenii ATCC
           33641]
          Length = 232

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 88/234 (37%), Positives = 137/234 (58%), Gaps = 23/234 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRAEIDIARKLAAKLGVKA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVA-----MKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  +L +++L +++ SSLT++        + + + +P+TFVPGRNI+FL  A+  A
Sbjct: 58  -----HKVLDVSMLNELAVSSLTRDSIPVPTYDEDEKDAVPSTFVPGRNILFLTLASIYA 112

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           Y++    ++ GVCETD+SGYPDCR + ++A+  AI+LG+   +   TPLMWL K ETW L
Sbjct: 113 YQVQAQTVITGVCETDFSGYPDCRDEFVKALNNAIDLGIGRDIAFSTPLMWLDKAETWAL 172

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           A        + L+  ++ TCY G +      G GC  C AC+LR KG   +   
Sbjct: 173 AD---YYQQLELVRHDTLTCYNGIQ------GDGCGQCAACHLRAKGLESYLIN 217


>gi|71275956|ref|ZP_00652238.1| ExsB [Xylella fastidiosa Dixon]
 gi|71901398|ref|ZP_00683490.1| ExsB [Xylella fastidiosa Ann-1]
 gi|170730260|ref|YP_001775693.1| transcriptional regulator [Xylella fastidiosa M12]
 gi|254764394|sp|B0U2I4|QUEC_XYLFM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|71163189|gb|EAO12909.1| ExsB [Xylella fastidiosa Dixon]
 gi|71728831|gb|EAO30970.1| ExsB [Xylella fastidiosa Ann-1]
 gi|167965053|gb|ACA12063.1| transcriptional regulator [Xylella fastidiosa M12]
          Length = 230

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 71/239 (29%), Positives = 100/239 (41%), Gaps = 29/239 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+   + A  +   V  LS  YGQR+  EL+  + + + +  +  K  
Sbjct: 2   KKAVILLSGGMDSAVVTAIAQSQGFMVHALSIRYGQRHTSELDAAVRIARALNVVAHKVV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D       + L  +G  + +   +          +P T+VP RN I L  A   A  +G 
Sbjct: 62  D-------VDLRSIGGSALTDDIEIPDAG--GEGIPVTYVPARNTIMLSLALGWAEVIGA 112

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKL 183
            +I  GV   DYSGYPDCR   I A ET  NL  +  V      VH PL +L K E    
Sbjct: 113 ADIFCGVNAVDYSGYPDCRPQFITAFETLANLATKVGVEGTQLHVHAPLQFLSKAEIVHE 172

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKY 238
               G      +    + +CY    D     G  C  C AC LR  G+ +       +Y
Sbjct: 173 GLLHG------VDFGLTVSCYRADVD-----GRACGRCDACKLRAAGFADAGVVDPTRY 220


>gi|296113092|ref|YP_003627030.1| ExsB family protein [Moraxella catarrhalis RH4]
 gi|295920786|gb|ADG61137.1| ExsB family protein [Moraxella catarrhalis RH4]
 gi|326560085|gb|EGE10475.1| ExsB family protein [Moraxella catarrhalis 46P47B1]
 gi|326560468|gb|EGE10850.1| ExsB family protein [Moraxella catarrhalis 7169]
 gi|326561671|gb|EGE12008.1| ExsB family protein [Moraxella catarrhalis 103P14B1]
 gi|326570453|gb|EGE20493.1| ExsB family protein [Moraxella catarrhalis BC8]
 gi|326573430|gb|EGE23398.1| ExsB family protein [Moraxella catarrhalis 101P30B1]
          Length = 232

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 82/251 (32%), Positives = 120/251 (47%), Gaps = 35/251 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +    +A++LFSGG DS+TCL WA  +F  V  +SF YGQR+  EL     + KK+    
Sbjct: 1   MNNNQNAVVLFSGGLDSTTCLYWAKSQFKTVTAVSFCYGQRHSSELHAAQNIAKKLSVRH 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ-------DNNLPNTFVPGRNIIFLV 117
                       + +A LG  + + +  +V    +       D   P T+VP RN IFL 
Sbjct: 61  HVID--------IDIAKLGGSALTDMNLSVPNHDESVTYSDADQVAPITYVPARNTIFLS 112

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG-----MESHVTVHTPL 172
           +A  +A     + I+IGV   DYSGYPDCR D I A ET  NL        +H+++  PL
Sbjct: 113 YALAVAEVTQASAIIIGVSSVDYSGYPDCRPDYIAAFETMANLATVSGRQGNHLSIIAPL 172

Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
             L K +T  L   +G      +    + +CY          G  C  C +C+LR++G+M
Sbjct: 173 QNLSKADTLTLGISLG------VDYSMTVSCYQAD-----ALGRACGHCDSCHLRKQGFM 221

Query: 233 EFK----EKYQ 239
           + K     +YQ
Sbjct: 222 DAKIADPTRYQ 232


>gi|262278176|ref|ZP_06055961.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262258527|gb|EEY77260.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 226

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 73/247 (29%), Positives = 110/247 (44%), Gaps = 32/247 (12%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M   ++  P A++L SGG DS+TCL+WA  R      +SF YGQR+  EL+    + ++ 
Sbjct: 1   MEKNMR--PRAIVLLSGGLDSTTCLAWAQAR-YECIAISFMYGQRSTTELDAAKALTQRA 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                           + LA LG  + +     V  ++Q+      +VP RN IFL +A 
Sbjct: 58  DVEHRVIN--------IDLANLGGSALTDHNIAVPEQLQEGIPVT-YVPARNTIFLSYAL 108

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWL 175
             A       IVIG+   DYSGYPDCR + I A      L  ++ V        TPL+ L
Sbjct: 109 AAAEVFNAEAIVIGINAVDYSGYPDCRPEFIDAFANMARLATKAGVEGKPLKFETPLLHL 168

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K    +L  + G      +   ++ +CY          G  C  C +C LR++G++E  
Sbjct: 169 SKANIIRLGIEHG------VDYSQTVSCYQAD-----AQGRACGKCDSCRLRKEGFIEAG 217

Query: 236 ----EKY 238
                +Y
Sbjct: 218 VADPTRY 224


>gi|297539672|ref|YP_003675441.1| exsB protein [Methylotenera sp. 301]
 gi|297259019|gb|ADI30864.1| exsB protein [Methylotenera sp. 301]
          Length = 230

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 70/243 (28%), Positives = 108/243 (44%), Gaps = 28/243 (11%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K   +A++L SGG DS+TCL+ A  +      LS DY QR+  EL     V   +     
Sbjct: 4   KTKKNAVVLLSGGLDSATCLAIAKSQGFDCYCLSLDYHQRHIAELHAAKNVANVMGAAAH 63

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           K  +       L L++ G  + +     V    +   +P T+VP RN I L  A   A  
Sbjct: 64  KTAN-------LDLSLFGGSALTDDAIAVPES-ETAGIPITYVPARNTIMLSLALAWAEV 115

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYET 180
           L   +I IGV   DYSGYPDCR + ++A +   NL  +       +T+H PL+ + K + 
Sbjct: 116 LKSQDIFIGVNALDYSGYPDCRGEYVKAFQAMANLATKSAVEGHAITIHAPLIDMTKAQI 175

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----E 236
             L  ++G      +    + +CY          G  C  C +C LR++G+         
Sbjct: 176 VTLGTELG------VDYAMTVSCYQAD-----SHGEACGLCDSCRLRREGFAAAGLADPT 224

Query: 237 KYQ 239
           +Y+
Sbjct: 225 RYK 227


>gi|71901606|ref|ZP_00683686.1| ExsB [Xylella fastidiosa Ann-1]
 gi|71728616|gb|EAO30767.1| ExsB [Xylella fastidiosa Ann-1]
          Length = 230

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 71/239 (29%), Positives = 100/239 (41%), Gaps = 29/239 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+   + A  +   V  LS  YGQR+  EL+  + + + +  +  K  
Sbjct: 2   KKAVILLSGGMDSAVVTAIAQSQGFMVHALSIRYGQRHTSELDAAVRIARALNVVAHKVV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D       + L  +G  + +   +          +P T+VP RN I L  A   A  +G 
Sbjct: 62  D-------VDLRSIGGSALTDDIEIPDAG--GEGIPVTYVPARNTIMLSLALGWAEVIGA 112

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKL 183
            +I  GV   DYSGYPDCR   I A ET  NL  +  V      VH PL +L K E    
Sbjct: 113 ADIFCGVNAVDYSGYPDCRPQFITAFETLANLATKVGVEGTQLHVHAPLQFLSKAEIVHE 172

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKY 238
               G      +    + +CY    D     G  C  C AC LR  G+ +       +Y
Sbjct: 173 GLLHG------VDFGLTVSCYRADVD-----GRACGRCDACKLRAAGFADAGVVDPTRY 220


>gi|254282794|ref|ZP_04957762.1| exsB protein [gamma proteobacterium NOR51-B]
 gi|219678997|gb|EED35346.1| exsB protein [gamma proteobacterium NOR51-B]
          Length = 224

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 66/235 (28%), Positives = 103/235 (43%), Gaps = 24/235 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A++L SGG DS+T L+ A     +   LSFDYGQR++ EL+    V   +   + K 
Sbjct: 3   SKKAVVLVSGGLDSATVLAMAAAAGRQCFALSFDYGQRHRAELKAAAHVASSVPGTVHKV 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    L L+ +G  + +  +  V     +      +VP RN +FL  A   A  L 
Sbjct: 63  VQ-------LDLSTIGGSALTDTSIAVPTSPTEGIPVT-YVPARNTVFLSIALGWAEVLD 114

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWK 182
              I IGV   DYSGYPDCR   I A  +   +  ++ V      V TP++ + K +  +
Sbjct: 115 ADEIHIGVNAVDYSGYPDCRPAFIDAFRSLAAVATKAGVEGHPLAVCTPIIDMTKGDIIR 174

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
              ++G      +    + +CY          G  C  C +C LR+ G+ E   +
Sbjct: 175 AGTELG------VDYALTVSCYQPD-----GEGLACGRCDSCRLRRAGFREAGVE 218


>gi|307705448|ref|ZP_07642303.1| queuosine biosynthesis protein queC [Streptococcus mitis SK597]
 gi|307620983|gb|EFO00065.1| queuosine biosynthesis protein queC [Streptococcus mitis SK597]
          Length = 217

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 99/225 (44%), Positives = 142/225 (63%), Gaps = 19/225 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WA + ++ VE ++F YGQR+ +E++    + K+       
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWAKEHYETVEAVTFAYGQRHHLEIQVAREIAKEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL +++LG I+ ++LT ++ ++ ++  +PNTFV GRN +FL FAA LA + 
Sbjct: 57  -----IRHHILDMSLLGQITENALTSDLEIEQKEGEVPNTFVDGRNHLFLSFAAVLAKQR 111

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI +IV GVCETD+SGYPDCR   ++++   +NL M+    + TPLMWL K ETW+LA  
Sbjct: 112 GIKDIVTGVCETDFSGYPDCRDVFVKSLNVTLNLAMDYDFVIQTPLMWLDKAETWELADQ 171

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
           +G  D V    E++ TCY G        G GC  CPAC+LRQ G 
Sbjct: 172 LGAFDYVR---EKTLTCYNGI------IGSGCEECPACHLRQHGL 207


>gi|262274644|ref|ZP_06052455.1| queuosine Biosynthesis QueC ATPase [Grimontia hollisae CIP 101886]
 gi|262221207|gb|EEY72521.1| queuosine Biosynthesis QueC ATPase [Grimontia hollisae CIP 101886]
          Length = 232

 Score =  165 bits (417), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 97/229 (42%), Positives = 142/229 (62%), Gaps = 21/229 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  FD V  ++FDY QR+K E+E    V K +        
Sbjct: 2   KKAVVVFSGGQDSTTCLIQALSEFDEVHCITFDYNQRHKQEIEVACDVAKTLG------- 54

Query: 69  DSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +    ++ + +L +++ SSLT++   V+ ++Q+N LPN+FVPGRNI+FL  A   AY+
Sbjct: 55  --VTSHKVMDVGLLNELAISSLTRDNIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQ 112

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           LG   ++ GVCETD+SGYPDCR+D ++++  ++ LGM+  + + TPLMWL K ETW LA 
Sbjct: 113 LGAQTVITGVCETDFSGYPDCRNDFVQSMNKSLVLGMDRELEIRTPLMWLNKAETWALAD 172

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
             G    +  + + + TCY G        G GC  CPAC LRQKG  ++
Sbjct: 173 KYG---KLEYVRDNTLTCYNG------VIGRGCGDCPACDLRQKGLDDY 212


>gi|149377360|ref|ZP_01895105.1| Predicted PP-loop superfamily ATPase [Marinobacter algicola DG893]
 gi|149358372|gb|EDM46849.1| Predicted PP-loop superfamily ATPase [Marinobacter algicola DG893]
          Length = 221

 Score =  165 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 91/233 (39%), Gaps = 27/233 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              + ++++SGG DS T L  A  R  RV  LSFDYGQR+  ELEC   V + +      
Sbjct: 1   MTETVVVIYSGGMDSFTLLHLARARGYRVHALSFDYGQRHVRELECARQVCEALS----- 55

Query: 67  WKDSLGEDHILPLAILGDIS----HSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                    ++ +  L ++      +          +++N+  T VP RN+I L  A   
Sbjct: 56  -----VPHKVIDIRALSEVMAGSALTDAVDVPEGHYEEDNMKATVVPNRNMILLSLATGY 110

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A   G   +  G    D++ YPDCR + +  ++    +     V +  P M   K     
Sbjct: 111 AVTAGAVAVWYGAHGGDHAIYPDCRPEFVEKMDAVCQVANYEPVKIEAPFMGSDKGAILA 170

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
               +G      L    + TCY G+          C  C +C  R + +    
Sbjct: 171 EGLKLG------LDYSRTWTCYNGRD-------RACGVCGSCVERLEAFAANG 210


>gi|262368583|ref|ZP_06061912.1| queuosine biosynthesis protein queC [Acinetobacter johnsonii SH046]
 gi|262316261|gb|EEY97299.1| queuosine biosynthesis protein queC [Acinetobacter johnsonii SH046]
          Length = 222

 Score =  165 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 74/241 (30%), Positives = 107/241 (44%), Gaps = 30/241 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             P A++L SGG DS+TCL+WA  +      LSF YGQR+  EL+    + KK       
Sbjct: 1   MRPRAIVLLSGGLDSTTCLAWAQAQ-YDCTALSFMYGQRSTTELDAARELTKKAGVEHRV 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     + L  LG  + +  + +V    +   +P T+VP RN IFL +A   A  L
Sbjct: 60  IN--------IDLGNLGGSALTDHSIDVPD-HEQVGIPVTYVPARNTIFLSYALAAAEVL 110

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETW 181
               IVIG+   DYSGYPDCR + I A      L  +  V        TPL+ L K    
Sbjct: 111 DAEAIVIGINAVDYSGYPDCRPEFIEAFANMARLATKVGVEGKPLKFETPLLHLSKANII 170

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EK 237
           +L  + G      +   ++ +CY          G  C  C +C LR++G+ +       +
Sbjct: 171 RLGIEHG------VDYSQTVSCYQADD-----QGRACGKCDSCRLRKEGFADAGVADPTR 219

Query: 238 Y 238
           Y
Sbjct: 220 Y 220


>gi|77163687|ref|YP_342212.1| ExsB [Nitrosococcus oceani ATCC 19707]
 gi|254435905|ref|ZP_05049412.1| exsB protein [Nitrosococcus oceani AFC27]
 gi|110816236|sp|Q3JER4|QUEC_NITOC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|76882001|gb|ABA56682.1| preQ(0) biosynthesis protein QueC [Nitrosococcus oceani ATCC 19707]
 gi|207089016|gb|EDZ66288.1| exsB protein [Nitrosococcus oceani AFC27]
          Length = 224

 Score =  165 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 70/241 (29%), Positives = 106/241 (43%), Gaps = 28/241 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           AP A++L SGG DS+T L+ A ++     TLSF+YGQR++VEL+    + +++  +  K 
Sbjct: 3   APKAVVLVSGGLDSATVLAIAREQEFICHTLSFNYGQRHRVELQAAAEISRRMGAVEHK- 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    + L   G  + +  +  V            +VP RN +FL FA   A  LG
Sbjct: 62  ------RITIDLGGFGGSALTDPSMAVPEASSGAIPIT-YVPARNTVFLSFALGWAEVLG 114

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWK 182
             +I IGV   DYSGYPDCR   I+A E    L            +  PL+ L K E  +
Sbjct: 115 AQDIFIGVNAVDYSGYPDCRPAFIKAFEHLAKLATCAGLEGRAFRIQAPLLHLSKAEIIR 174

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKY 238
               +G      +    + +CY          G  C  C +C  R++G+ +       +Y
Sbjct: 175 EGMRLG------IDYSRTISCYQADE-----NGRACGVCDSCRFRKQGFWDAGVPDPTRY 223

Query: 239 Q 239
            
Sbjct: 224 H 224


>gi|317047182|ref|YP_004114830.1| exsB protein [Pantoea sp. At-9b]
 gi|316948799|gb|ADU68274.1| exsB protein [Pantoea sp. At-9b]
          Length = 231

 Score =  165 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 93/233 (39%), Positives = 138/233 (59%), Gaps = 22/233 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E+E    + +K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALQQYDEVHCVTFDYGQRHREEIEVAAELAQKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++     A     + LP+TFVPGRNI+FL  A+  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDNIPVPAYDPDASGLPSTFVPGRNILFLTLASIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A++LGM  H+   TPLMWL K ETW LA
Sbjct: 113 QVEAEAVITGVCETDFSGYPDCRDEFVKALNNAVSLGMARHIRFETPLMWLNKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                  LV     E+ TCY G +      G GC  C AC+LR +G  +++  
Sbjct: 173 DYWQQLPLVR---AETLTCYNGIK------GDGCGECAACHLRARGLTDYQAN 216


>gi|83649265|ref|YP_437700.1| PP-loop superfamily ATPase [Hahella chejuensis KCTC 2396]
 gi|110816229|sp|Q2S7U9|QUEC_HAHCH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|83637308|gb|ABC33275.1| predicted PP-loop superfamily ATPase [Hahella chejuensis KCTC 2396]
          Length = 231

 Score =  165 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 93/226 (41%), Gaps = 19/226 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+ +FSGG DS T L+  +     V  LSF+YGQR+  ELEC   V + +       
Sbjct: 10  PNRAVAIFSGGMDSFTLLNELVQEGKEVFALSFNYGQRHSKELECARQVCESLNIAHKII 69

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +         ++L   S +   +      ++ N+ +T VP RN+I L  A   A  L 
Sbjct: 70  DITAIN------SLLAGSSLTDDIQVPEGHYEEENMKSTVVPNRNMILLSLAIGYAVSLK 123

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +  G    D++ YPDCR   +  +  A  L     V V  P ++  K E  +    +
Sbjct: 124 AEAVYYGAHGGDHAIYPDCRPAFVEIMSEASKLANYEPVEVRAPYLYETKIEILRRGLAL 183

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
           G      L   ++ TCY G+          C  C +C  R + + +
Sbjct: 184 G------LDYGQTWTCYNGREK-------ACGKCGSCVERLEAFDK 216


>gi|312623408|ref|YP_004025021.1| exsb protein [Caldicellulosiruptor kronotskyensis 2002]
 gi|312203875|gb|ADQ47202.1| exsB protein [Caldicellulosiruptor kronotskyensis 2002]
          Length = 221

 Score =  165 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 55/232 (23%), Positives = 97/232 (41%), Gaps = 27/232 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS+T L     +   V  +SF YGQ++  ELE        +         
Sbjct: 2   KAVVVLSGGMDSTTLLYDVKSQGYEVFAISFLYGQKHSKELEFAKKTCSLLS-------- 53

Query: 70  SLGEDHILPLAILGDISHSSLT----KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 I+ ++   +++ S+LT            D+ +  T VP RN++ L  +A  A  
Sbjct: 54  --IPHKIVDISFFAELAPSALTALDWNVPEGYYTDSTMKQTVVPNRNMVLLSISAAYAIS 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           LG   +  G    D+  YPDCR + + A++ A+ L     + +  P + +KK +  K   
Sbjct: 112 LGAKKLFYGAHAGDHPIYPDCRKEFVEAMKNALYLADYIGLELDAPYVDMKKEDILKRGL 171

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           ++G      +    + +CY G +         C  C  C  R + + +   K
Sbjct: 172 ELG------VDYSLTWSCYKGGQK-------ACGRCGTCTERIEAFKKVGVK 210


>gi|127512990|ref|YP_001094187.1| exsB protein [Shewanella loihica PV-4]
 gi|167016453|sp|A3QEN0|QUEC_SHELP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|126638285|gb|ABO23928.1| exsB protein [Shewanella loihica PV-4]
          Length = 227

 Score =  165 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 93/225 (41%), Positives = 135/225 (60%), Gaps = 15/225 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++FSGGQDS+TCL  AL+++D V  ++FDYGQR+  E+     + K +     K  D
Sbjct: 3   KAVVVFSGGQDSTTCLIQALNQYDEVHAVTFDYGQRHSEEIATAAKLAKDLKVDSHKILD 62

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  L  L   + +     V+ ++ DN LPNTFVPGRNI+FL  A   AY+LG  
Sbjct: 63  ------VTVLNELAISALTRDAIPVSNELMDNGLPNTFVPGRNILFLTLAGIYAYQLGAE 116

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
           +++ GVCETD+SGYPDCR   I+A+++A+  GM+  + + TPLMWL K +TW LA     
Sbjct: 117 SVITGVCETDFSGYPDCRDSFIKAMQSALEQGMDRELKLVTPLMWLNKAQTWALADK--- 173

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              + L+ +++ TCY G        G GC +CPAC LR KG  ++
Sbjct: 174 YHSLELVRDQTLTCYNGIV------GSGCGTCPACLLRAKGLNDY 212


>gi|330445417|ref|ZP_08309069.1| 7-cyano-7-deazaguanine synthase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489608|dbj|GAA03566.1| 7-cyano-7-deazaguanine synthase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 232

 Score =  165 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 91/228 (39%), Positives = 143/228 (62%), Gaps = 21/228 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++FSGGQDS+TCL  AL  +D V  ++FDYGQR+K+E+E    + K +         
Sbjct: 3   KAVVVFSGGQDSTTCLIQALAHYDEVHCITFDYGQRHKLEIEVAEAIAKDLG-------- 54

Query: 70  SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +    ++ + +L +++ SSLT++   V+ ++Q N LPN+FVPGRNI+FL  A   AY++
Sbjct: 55  -VTAHKVMDVGLLNELAISSLTRDNIAVSHELQANGLPNSFVPGRNILFLTLAGIYAYQI 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   ++ GVCETD+SGYPDCR + ++++  ++ LGM+  + + TPLMWL K ETW LA  
Sbjct: 114 GAETVITGVCETDFSGYPDCRDEFVKSLNQSLVLGMDRQLKIDTPLMWLNKAETWALADQ 173

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
                 ++ + E++ TCY G        G GC +CP+C LR+ G  ++
Sbjct: 174 ---YSKLDYVREKTLTCYNGI------IGDGCGNCPSCDLRRAGLNDY 212


>gi|119944857|ref|YP_942537.1| exsB protein [Psychromonas ingrahamii 37]
 gi|189038943|sp|A1STX3|QUEC_PSYIN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|119863461|gb|ABM02938.1| exsB protein [Psychromonas ingrahamii 37]
          Length = 221

 Score =  165 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 55/243 (22%), Positives = 97/243 (39%), Gaps = 32/243 (13%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +   ++++SGG DS T L  A+ +      L+FDYGQR+  E+E    V +++      
Sbjct: 1   MSKKVVVIYSGGMDSFTVLHKAMQQGLTPYALTFDYGQRHIKEIEVAREVCEELG----- 55

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAAT 121
                    ++ ++ +  +   S   + ++       Q  ++ +T VP RN+I L  A  
Sbjct: 56  -----VHHKVIDISAINQLIGGSSLTDSSIDVAQGHYQQESMKSTVVPNRNMILLSLAIG 110

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            A  LG   +  G    D+  YPDCR   +  +     +     V + +P +   K    
Sbjct: 111 YAVSLGAEQVYYGAHSGDHEIYPDCRPIFVEKMNDVAAVANYEKVEIFSPYLNNNKSGIL 170

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK---- 237
           K    +G      L   ++ TCY G+          C  C +C  R + +     K    
Sbjct: 171 KDGLAMG------LDYSKTWTCYNGREK-------ACGKCGSCVERLEAFAANGLKDPIA 217

Query: 238 YQD 240
           Y+D
Sbjct: 218 YED 220


>gi|269138354|ref|YP_003295054.1| queuosine biosynthesis protein QueC [Edwardsiella tarda EIB202]
 gi|267984014|gb|ACY83843.1| queuosine biosynthesis protein QueC [Edwardsiella tarda EIB202]
 gi|304558386|gb|ADM41050.1| Queuosine Biosynthesis QueC ATPase [Edwardsiella tarda FL6-60]
          Length = 229

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 90/228 (39%), Positives = 134/228 (58%), Gaps = 20/228 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL R+D V  ++FDYGQR++ E++    + K++        
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALHRYDDVHCITFDYGQRHRAEIDVARRLAKQLGASA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                  +L + +L +++ SSLT++        ++ +PNTFVPGRN++FL  AA  AY++
Sbjct: 58  -----HKVLDVGLLNELAISSLTRDNIPVPTQSEDGIPNTFVPGRNVLFLTLAAIYAYQV 112

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               ++ GVCETD+SGYPDCR   ++A+  A+ LGM   +   TPLMWL K ETW LA  
Sbjct: 113 EAEAVITGVCETDFSGYPDCRDQFVQALNHAVCLGMARDIRFETPLMWLNKAETWALADY 172

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            G  + V     ++ TCY G +      G GC  C AC+LR  G  ++
Sbjct: 173 YGQLERVR---HDTLTCYNGIQ------GDGCGHCAACHLRAHGLQQY 211


>gi|62179067|ref|YP_215484.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|62126700|gb|AAX64403.1| putative (aluminum) resistance protein [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|322713528|gb|EFZ05099.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 266

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 91/230 (39%), Positives = 136/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL+ A  ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 37  KRAVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 92

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       +   + +PNTFVPGRNI+FL  AA  AY
Sbjct: 93  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAY 147

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A+NLGM   +   TPLMW+ K ETW LA
Sbjct: 148 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA 207

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+ EE+ TCY G +      G GC  C AC LR  G   +
Sbjct: 208 DYWGQ---LDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHY 248


>gi|114330320|ref|YP_746542.1| exsB protein [Nitrosomonas eutropha C91]
 gi|122941346|sp|Q0AJ94|QUEC_NITEC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|114307334|gb|ABI58577.1| preQ(0) biosynthesis protein QueC [Nitrosomonas eutropha C91]
          Length = 226

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 72/241 (29%), Positives = 107/241 (44%), Gaps = 27/241 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+T L+ A         LS DYGQR+  EL     + + +     ++ 
Sbjct: 2   KKAVVLLSGGLDSTTTLAIARGNGFACYALSVDYGQRHAAELAAATRIGQLLQVCEHQFL 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L L +L   + +  +  V +   +  +P T+VP RN I L  A   A  LG 
Sbjct: 62  K-------LDLTVLASSALTDPSVTVPIHGTNRGIPATYVPARNTIMLSLALAWAEVLGS 114

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKL 183
            +I IGV   DYSGYPDCR D I A E   NL  +     + + VH PL+ L K++  + 
Sbjct: 115 QDIFIGVTAVDYSGYPDCRPDYIDAFEKMANLATKAGREGNLLKVHAPLINLPKHDIIRR 174

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF----KEKYQ 239
             ++G      +    + +CY             C  C AC++R+ G+          YQ
Sbjct: 175 GLELG------IDYSMTVSCYQADASGW-----ACGQCDACHIRRAGFAAANIPDPTYYQ 223

Query: 240 D 240
           D
Sbjct: 224 D 224


>gi|110816279|sp|Q9PCC3|QUEC_XYLFA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
          Length = 230

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 71/239 (29%), Positives = 99/239 (41%), Gaps = 29/239 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+   + A  +   V  LS  YGQR+  EL+  + + + +     K  
Sbjct: 2   KKAVVLLSGGMDSAVVTAIAQSQGFMVHALSIRYGQRHTSELDAAVRIARVLNVAAHKVV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D       + L  +G  + +   +          +P T+VP RN I L  A   A  +G 
Sbjct: 62  D-------VDLRSIGGSALTDDIEIPDAG--GKGIPVTYVPARNTIMLSLALGWAEVIGA 112

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKL 183
            +I  GV   DYSGYPDCR   I A ET  NL  +  V      VH PL +L K E    
Sbjct: 113 ADIFCGVNAVDYSGYPDCRPQFITAFETLANLATKVGVEGTQLHVHAPLQFLSKAEIVHE 172

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKY 238
               G      +    + +CY    D     G  C  C AC LR  G+ +       +Y
Sbjct: 173 GVLHG------VDFGLTVSCYRADVD-----GRACGRCDACKLRAAGFADAGVADPTRY 220


>gi|71282550|ref|YP_269590.1| exsB protein [Colwellia psychrerythraea 34H]
 gi|110816200|sp|Q480C9|QUEC1_COLP3 RecName: Full=7-cyano-7-deazaguanine synthase 1; AltName:
           Full=7-cyano-7-carbaguanine synthase 1; AltName:
           Full=PreQ(0) synthase 1; AltName: Full=Queuosine
           biosynthesis protein queC 1
 gi|71148290|gb|AAZ28763.1| exsB protein [Colwellia psychrerythraea 34H]
          Length = 218

 Score =  164 bits (415), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 58/227 (25%), Positives = 91/227 (40%), Gaps = 19/227 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            A   ++++SGG DS T L+ A      V  LSFDYGQR+  ELEC   V K++      
Sbjct: 1   MAEKVVVIYSGGMDSFTVLNRAKKDGKEVFALSFDYGQRHVKELECASIVCKELAVNHKV 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              S          +L   S +          +  ++ +T VP RN+I L  A   A  +
Sbjct: 61  IDISAINQ------LLAGSSLTDDIDIPEGHYEAESMKSTVVPNRNMILLSLAVAYAVSV 114

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   +  G    D++ YPDCR + +  +     +     V + +P + + K         
Sbjct: 115 GAEQVYYGAHSGDHAIYPDCRPEFVEKMNDVCKIANYESVEIFSPYLSVDKTAILADGIK 174

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
           +G      L    + TCY G+          C  C +C  R + + E
Sbjct: 175 MG------LDYSNTWTCYNGREK-------ACGKCGSCQERLEAFEE 208


>gi|293609846|ref|ZP_06692148.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828298|gb|EFF86661.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325123072|gb|ADY82595.1| queuosine biosynthesis protein QueC [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 226

 Score =  164 bits (415), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 71/247 (28%), Positives = 109/247 (44%), Gaps = 32/247 (12%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M   ++    A++L SGG DS+TCL+WA  R      +SF YGQR+  EL+    + ++ 
Sbjct: 1   MEKNMRS--RAIVLLSGGLDSTTCLAWAQAR-YECIAISFMYGQRSTTELDAAKALAQRS 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                           + LA LG  + +     V  ++Q+      +VP RN IFL +A 
Sbjct: 58  GVEHRVIN--------IDLANLGGSALTDHNIAVPEQLQEGIPVT-YVPARNTIFLSYAL 108

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWL 175
             A       IVIG+   DYSGYPDCR + I A      L  ++ V        TPL+ L
Sbjct: 109 AAAEVFNAEAIVIGINAVDYSGYPDCRPEFIDAFANMARLATKAGVEGKPLKFETPLLHL 168

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K    +L  + G      +   ++ +CY          G  C  C +C LR++G+++  
Sbjct: 169 SKANIIRLGIEHG------VDYSQTVSCYQAD-----AQGRACGKCDSCRLRKEGFIDAG 217

Query: 236 ----EKY 238
                +Y
Sbjct: 218 VTDPTRY 224


>gi|28198846|ref|NP_779160.1| transcriptional regulator [Xylella fastidiosa Temecula1]
 gi|182681543|ref|YP_001829703.1| exsB protein [Xylella fastidiosa M23]
 gi|81438814|sp|Q87CW1|QUEC_XYLFT RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764393|sp|B2I4Y4|QUEC_XYLF2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|28056937|gb|AAO28809.1| transcriptional regulator [Xylella fastidiosa Temecula1]
 gi|182631653|gb|ACB92429.1| exsB protein [Xylella fastidiosa M23]
 gi|307579970|gb|ADN63939.1| exsB protein [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 230

 Score =  164 bits (415), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 71/239 (29%), Positives = 100/239 (41%), Gaps = 29/239 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+   + A  +   V  LS  YGQR+  EL+  + + + +  +  K  
Sbjct: 2   KKAVILLSGGMDSAVVTAIAQSQGFMVHALSIRYGQRHTSELDAAVRIARALNVVAHKVV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D       + L  +G  + +   +          +P T+VP RN I L  A   A  +G 
Sbjct: 62  D-------VDLRSIGGSALTDDIEIPDAG--GEGIPVTYVPARNTIMLSLALGWAEVIGA 112

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKL 183
            +I  GV   DYSGYPDCR   I A ET  NL  +  V      VH PL +L K E    
Sbjct: 113 ADIFCGVNAVDYSGYPDCRPQFITAFETLANLATKVGVEGTQLHVHAPLQFLSKAEIVHE 172

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKY 238
               G      +    + +CY    D     G  C  C AC LR  G+ +       +Y
Sbjct: 173 GLLHG------VDFGLTVSCYRADVD-----GRACGRCDACKLRVAGFADAGVVDPTRY 220


>gi|255020131|ref|ZP_05292201.1| Queuosine Biosynthesis QueC ATPase [Acidithiobacillus caldus ATCC
           51756]
 gi|254970424|gb|EET27916.1| Queuosine Biosynthesis QueC ATPase [Acidithiobacillus caldus ATCC
           51756]
          Length = 228

 Score =  164 bits (415), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 67/236 (28%), Positives = 107/236 (45%), Gaps = 24/236 (10%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +     +A++L SGG DS+T L+ A +    +  LSFDYGQR+  EL+    + +     
Sbjct: 1   MGDSEKAAIVLLSGGLDSATVLAIAREAGFALHALSFDYGQRHATELQFARKLAEAAGVR 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
             +          + L I G  + +     V  +     +P T+VP RN +FL +A  LA
Sbjct: 61  SHRVLK-------MDLRIFGASALTDERIAVPEEPAAAGIPITYVPARNTLFLSYALALA 113

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME------SHVTVHTPLMWLKK 177
             LG+ +I IGV   DYSGYPDCR + I+  +    +           +++H PL +L K
Sbjct: 114 EVLGVLDIFIGVNSQDYSGYPDCRPEFIQRFQELAQVATVLGTEKGQKLSIHAPLQYLSK 173

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
            +  +   ++G      +    + +CY          G  C  C +C LR  G+ E
Sbjct: 174 AQIIRRGLELG------VDYAHTRSCYQ-----LDTQGRSCGRCDSCRLRLAGFAE 218


>gi|282898083|ref|ZP_06306078.1| ExsB [Raphidiopsis brookii D9]
 gi|281197227|gb|EFA72128.1| ExsB [Raphidiopsis brookii D9]
          Length = 282

 Score =  164 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 67/235 (28%), Positives = 102/235 (43%), Gaps = 29/235 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DSST L  A         +SFDY QR++ EL+  + + + +  +  +   
Sbjct: 58  KAVILLSGGLDSSTVLYQARADGYECYVISFDYHQRHRRELQSAISIAQSLEVVEHQLV- 116

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMK----IQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    L   G  + +  +  V           ++P T+VP RN IFL FA   A  
Sbjct: 117 ------TFDLRSWGGSALTDNSIPVPQNRPLDQMSGSIPITYVPARNTIFLSFALAYAEA 170

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKKYET 180
           +    + IGV   DYSGYPDCR D I A++    LG +       + +  PL+ L K + 
Sbjct: 171 IRAERVYIGVNALDYSGYPDCRPDYIHAMQEVFRLGTKQGREGKRIDIVAPLINLTKSQI 230

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            +L   +G      +  E + +CY G +         C  C +C LR   + E  
Sbjct: 231 IQLGNLLG------VPWELTWSCYSGDQQP-------CGVCDSCQLRWAAFHELG 272


>gi|170726898|ref|YP_001760924.1| exsB protein [Shewanella woodyi ATCC 51908]
 gi|169812245|gb|ACA86829.1| exsB protein [Shewanella woodyi ATCC 51908]
          Length = 233

 Score =  164 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 103/242 (42%), Positives = 155/242 (64%), Gaps = 24/242 (9%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + K    A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E+E    + +++   
Sbjct: 1   MSKAVSKAVVVFSGGQDSTTCLIQALTQYDEVHGITFDYGQRHRQEIEVAETLGQQLG-- 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                  L     L +++L +++ S+LT++   V+ ++ DN LPNTFVPGRNI+FL  A 
Sbjct: 59  -------LKSHKTLDVSMLNELAISALTRDSIQVSNELMDNGLPNTFVPGRNILFLTLAG 111

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
             AY+LG   ++ GVCETD+SGYPDCR+D ++A+++A+  GM+  +T+ TPLMWL K ET
Sbjct: 112 IFAYQLGADTVITGVCETDFSGYPDCRNDFVKAMQSALEQGMDRKLTLSTPLMWLNKAET 171

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF---KEK 237
           W LA        ++L+ +E+ TCY G        G GC +CPAC LRQKG  ++   KE+
Sbjct: 172 WALADK---YHSLDLVRDETLTCYNGIV------GTGCGTCPACLLRQKGLDDYCNNKEQ 222

Query: 238 YQ 239
            Q
Sbjct: 223 VQ 224


>gi|215919333|ref|NP_821053.2| queuosine biosynthesis protein QueC [Coxiella burnetii RSA 493]
 gi|206584218|gb|AAO91567.2| queuosine biosynthesis protein [Coxiella burnetii RSA 493]
          Length = 244

 Score =  164 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 73/234 (31%), Positives = 109/234 (46%), Gaps = 23/234 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+TCL+ A  +      LSFDYGQ++  EL     +      +  +  
Sbjct: 20  KKAVILISGGLDSTTCLAVAKSKGFSCYALSFDYGQKHHSELVAAEKIAAHFNVVRYEVV 79

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L +  LG  + +  + +V     + ++P T+VP RN IFL  A   A  L  
Sbjct: 80  -------TLSIGKLGGSALTDNSLDVPDYGGNESIPITYVPARNTIFLSIALGWAEILDA 132

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKL 183
            +I+IG    DYSGYPDCR + I A +   NL  +       + +  PL+ L K ET KL
Sbjct: 133 ESILIGASAIDYSGYPDCRPEYIAAFQNLANLATKRGIEGHSIKIEAPLIHLSKAETIKL 192

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
              +G      +    + +CY    +     G  C  C +C LR+KG+ E + K
Sbjct: 193 GYSLG------VDYSMTVSCYRANEE-----GLACGYCDSCELRKKGFKEAEIK 235


>gi|113475545|ref|YP_721606.1| exsB protein [Trichodesmium erythraeum IMS101]
 gi|123056780|sp|Q114E1|QUEC_TRIEI RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|110166593|gb|ABG51133.1| exsB protein [Trichodesmium erythraeum IMS101]
          Length = 222

 Score =  164 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 71/237 (29%), Positives = 103/237 (43%), Gaps = 33/237 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DSST L  A         +SFDY QR+  EL+    +   +         
Sbjct: 2   KAVILLSGGLDSSTVLYQAKADGCECYAISFDYQQRHLRELDSAKKIADTVG-------- 53

Query: 70  SLGEDHIL--PLAILGDISHSSLTKNVAMKI----QDNNLPNTFVPGRNIIFLVFAATLA 123
            + E HI+   L   G  + +    ++           N+P T+VP RN IFL FA   A
Sbjct: 54  -VIEHHIVSFDLRSWGGSALTDSQIDLPSDRDLEEMSQNIPITYVPARNTIFLSFALAYA 112

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKKY 178
             +  + + IGV   DYSGYPDCR D I A++    LG         + +  PL+ +KK 
Sbjct: 113 EVVNASRVYIGVNALDYSGYPDCRPDYILAMQEVFRLGTRQGREGEAIAIVAPLIEMKKT 172

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           E  +L   +G      +  E++ +CY G           C  C +C LR   + E  
Sbjct: 173 EIIQLGNSLG------VPWEKTWSCYAGGEKP-------CGICDSCKLRLTAFQELG 216


>gi|157146939|ref|YP_001454258.1| queuosine biosynthesis protein QueC [Citrobacter koseri ATCC
           BAA-895]
 gi|167016423|sp|A8AK09|QUEC_CITK8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|157084144|gb|ABV13822.1| hypothetical protein CKO_02716 [Citrobacter koseri ATCC BAA-895]
          Length = 231

 Score =  164 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 91/230 (39%), Positives = 136/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL+ AL ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLAQALHQYDEVHCVTFDYGQRHRAEIDVARDLALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       +   + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLSELAVSSLTRDNIPVPDYEPDADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A+ LGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVTLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+ EE+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYWG---KLDLVREETLTCYNGIK------GDGCGQCAACNLRANGLNHY 213


>gi|204930537|ref|ZP_03221467.1| ExsB protein [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|204320471|gb|EDZ05674.1| ExsB protein [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
          Length = 231

 Score =  164 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 91/230 (39%), Positives = 136/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL+ A  ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARALALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       +   + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A+NLGM   +    PLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFEMPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+ EE+ TCY G +      G GC  C AC LR KG   +
Sbjct: 173 DYWGQ---LDLVREETLTCYNGIK------GDGCGHCAACNLRAKGLNHY 213


>gi|209364301|ref|YP_001425481.2| queuosine biosynthesis protein [Coxiella burnetii Dugway 5J108-111]
 gi|212213526|ref|YP_002304462.1| queuosine biosynthesis protein [Coxiella burnetii CbuG_Q212]
 gi|207082234|gb|ABS77553.2| queuosine biosynthesis protein [Coxiella burnetii Dugway 5J108-111]
 gi|212011936|gb|ACJ19317.1| queuosine biosynthesis protein [Coxiella burnetii CbuG_Q212]
          Length = 244

 Score =  164 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 73/234 (31%), Positives = 109/234 (46%), Gaps = 23/234 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+TCL+ A  +      LSFDYGQ++  EL     +      +  +  
Sbjct: 20  KKAVILISGGLDSTTCLAVAKSKGFACYALSFDYGQKHHSELVAAEKIAAHFNVVRYEVV 79

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L +  LG  + +  + +V     + ++P T+VP RN IFL  A   A  L  
Sbjct: 80  -------TLSIGKLGGSALTDNSLDVPDYGGNESIPITYVPARNTIFLSIALGWAEILDA 132

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKL 183
            +I+IG    DYSGYPDCR + I A +   NL  +       + +  PL+ L K ET KL
Sbjct: 133 ESILIGASAIDYSGYPDCRPEYIAAFQNLANLATKRGIEGHSIKIEAPLIHLSKAETIKL 192

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
              +G      +    + +CY    +     G  C  C +C LR+KG+ E + K
Sbjct: 193 GYSLG------VDYSMTVSCYRANEE-----GLACGYCDSCELRKKGFKEAEIK 235


>gi|254425193|ref|ZP_05038911.1| exsB protein [Synechococcus sp. PCC 7335]
 gi|196192682|gb|EDX87646.1| exsB protein [Synechococcus sp. PCC 7335]
          Length = 243

 Score =  164 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 69/241 (28%), Positives = 113/241 (46%), Gaps = 28/241 (11%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +K +P A++L SGG DS+TC + A+     V  LSF+YGQR+  EL     +   +    
Sbjct: 1   MKPSPKAVVLLSGGLDSATCAAQAIADGYDVIALSFNYGQRHDRELLAARELVSALDITE 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAAT 121
            +  D       + LA  G  S +  T  +  + +D     +P+T+VPGRN +F+  A +
Sbjct: 61  HQIID-------INLAQWGGSSLTDRTMVIPTEGKDLDAKVIPSTYVPGRNTVFIAIALS 113

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG-----MESHVTVHTPLMWLK 176
           LA   G   I +G+   DYSGYPDCR D + A +T  +L            +  PL+   
Sbjct: 114 LAEASGAIAIYLGINAVDYSGYPDCRPDYLAAFQTLASLSSKAGLENRAPKLVAPLISDS 173

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           K +    A ++G      + +E++ +CY G+          C  C +C +R    ++   
Sbjct: 174 KVDIVHRALNLG------VPIEKTWSCYSGED-------LPCGRCDSCRIRNDALVKAGR 220

Query: 237 K 237
           +
Sbjct: 221 R 221


>gi|149185387|ref|ZP_01863703.1| exsB protein [Erythrobacter sp. SD-21]
 gi|148830607|gb|EDL49042.1| exsB protein [Erythrobacter sp. SD-21]
          Length = 238

 Score =  164 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 67/241 (27%), Positives = 104/241 (43%), Gaps = 25/241 (10%)

Query: 1   MNDIIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           M     + P  A++L SGG DS    + A +R   +  L+ DYGQR+  EL+    + +K
Sbjct: 1   MTSQTSENPGPAVVLLSGGLDSMVTAALARERGHALHALTIDYGQRHMRELQSAKSIAEK 60

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +                L L   G  + ++   +V      N++P T+VP RN++FL   
Sbjct: 61  LGVERHVELP-------LDLRRFGGSALTAD-IDVPKTGVGNDIPVTYVPARNLVFLALT 112

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMW 174
              A   G  +I IGV   DYSGYPDCR + I +      LG +        ++H PL  
Sbjct: 113 TAFAETSGSRDIFIGVNALDYSGYPDCRPEFIASFAETARLGTKQGVEGEPFSIHAPLQH 172

Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           + K +  +    +       L    S +CY          G  C +C +C LR+KG+ + 
Sbjct: 173 MSKADIARECHRL------ALDPAWSWSCYDP-----TPEGTACGACDSCRLRRKGFEDA 221

Query: 235 K 235
            
Sbjct: 222 G 222


>gi|297570306|ref|YP_003691650.1| exsB protein [Desulfurivibrio alkaliphilus AHT2]
 gi|296926221|gb|ADH87031.1| exsB protein [Desulfurivibrio alkaliphilus AHT2]
          Length = 258

 Score =  164 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 74/248 (29%), Positives = 105/248 (42%), Gaps = 31/248 (12%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW--- 67
           A++L SGG DS+T L+ A     R   LSF YGQR+  ELE      +            
Sbjct: 18  AVVLLSGGLDSTTVLALAKAAGYRCHCLSFRYGQRHTQELELARANARHWGAARHLILNI 77

Query: 68  -------KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                      G++  +P   L  +      +  A  +        +VPGRN IFL +AA
Sbjct: 78  ELDAIGGSALTGDELEVPKDNLSPLDSPDGAETDAPGMAGEVPVT-YVPGRNTIFLAYAA 136

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWL 175
           + A  LG  +I IGV   D+SGYPDCR D + A+  A+NLG +         +  PL+ L
Sbjct: 137 SWAEVLGARDIFIGVNAVDFSGYPDCRPDYLEALAAALNLGSQCGREGRPFRLQAPLLHL 196

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K E       +G      +    +H+CY   +         C  C AC LR++G+    
Sbjct: 197 SKAEIIAKGLALG------VDYARTHSCYDPDQ-----QHRACGRCDACILRRRGFAAAG 245

Query: 236 ----EKYQ 239
                 YQ
Sbjct: 246 CPDPTTYQ 253


>gi|326330125|ref|ZP_08196436.1| ExsB protein [Nocardioidaceae bacterium Broad-1]
 gi|325951938|gb|EGD43967.1| ExsB protein [Nocardioidaceae bacterium Broad-1]
          Length = 232

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 75/238 (31%), Positives = 112/238 (47%), Gaps = 27/238 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T L+ A D+      LSF YGQR+++ELE    V +        
Sbjct: 1   MTKKAVVLLSGGLDSTTVLAIAKDQGYEPYALSFRYGQRHEIELEAARRVAEAAGVTRHV 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN----NLPNTFVPGRNIIFLVFAATL 122
             D       + L + G  + ++          D     ++P T+VP RN +FL FA   
Sbjct: 61  LCD-------IDLRVFGGSALTADVDVPKHGSADELASDDVPITYVPARNTVFLSFALAY 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKK 177
           A  +  T+I IGV   DYSGYPDCR + I A E   NL        + + +HTPL+ L K
Sbjct: 114 AETIEATDIFIGVSALDYSGYPDCRPEYIAAYEQMANLATRAGIEGNRMKIHTPLIELTK 173

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            +T ++ + +G      +    + +CY    +     G+ C  C +C LR KG+ E  
Sbjct: 174 GQTVEIGKRLG------VDYSLTSSCYDPDAE-----GHPCGHCDSCLLRLKGFAEVG 220


>gi|283784270|ref|YP_003364135.1| queuosine biosynthesis protein [Citrobacter rodentium ICC168]
 gi|282947724|emb|CBG87279.1| queuosine biosynthesis protein [Citrobacter rodentium ICC168]
          Length = 231

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 92/230 (40%), Positives = 133/230 (57%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLVQALHQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       +   + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLSELAVSSLTRDNIPVPDYEPDADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A+ LGM   +   TPLMWL K ETW LA
Sbjct: 113 QVKAQAVITGVCETDFSGYPDCRDEFVKALNHAVTLGMAKEIRFETPLMWLDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G  + V    EE+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYWGELERVR---EETLTCYNGIK------GDGCGQCAACNLRANGLNHY 213


>gi|226945709|ref|YP_002800782.1| ExsB protein [Azotobacter vinelandii DJ]
 gi|259551494|sp|C1DRE9|QUEC_AZOVD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|226720636|gb|ACO79807.1| ExsB protein [Azotobacter vinelandii DJ]
          Length = 224

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 68/247 (27%), Positives = 98/247 (39%), Gaps = 33/247 (13%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN+       A++L SGG DS+T  + A        ++SFDYGQR++ EL     V +++
Sbjct: 1   MNE-----KKAVILLSGGLDSATVAALAKTEGYACYSMSFDYGQRHRAELRAAERVARQL 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  K               +G  + +     V     +      +VP RN +FL  A 
Sbjct: 56  GMVEHKVIGLDLG-------GIGGSALTDPAIAVPESPCEGIPVT-YVPARNTVFLALAL 107

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWL 175
             A  LG  +I IGV   DYSGYPDCR   I A E   NL  +         +  PL  L
Sbjct: 108 GWAEVLGARDIFIGVNAVDYSGYPDCRPAFIEAFERMANLATKAGVEGQGFRIRAPLQNL 167

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K E  +     G      +    + +CY    +     G  C  C +C LR  G+    
Sbjct: 168 GKDEIIRAGLRHG------VDYGLTVSCYQADEE-----GRACGRCDSCRLRAAGFATAG 216

Query: 236 ----EKY 238
                +Y
Sbjct: 217 VTDPTRY 223


>gi|331651382|ref|ZP_08352407.1| ExsB protein [Escherichia coli M718]
 gi|331051123|gb|EGI23175.1| ExsB protein [Escherichia coli M718]
          Length = 231

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 90/232 (38%), Positives = 136/232 (58%), Gaps = 22/232 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       + + + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A++LGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
              G    ++L+  E+ TCY G +      G GC  C AC LR  G   +  
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLNHYLT 215


>gi|212219578|ref|YP_002306365.1| queuosine biosynthesis protein [Coxiella burnetii CbuK_Q154]
 gi|212013840|gb|ACJ21220.1| queuosine biosynthesis protein [Coxiella burnetii CbuK_Q154]
          Length = 244

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 73/234 (31%), Positives = 109/234 (46%), Gaps = 23/234 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+TCL+ A  +      LSFDYGQ++  EL     +      +  +  
Sbjct: 20  KKAVILISGGLDSTTCLAVAKSKGFACYALSFDYGQKHHSELVAAEKIAAHFNVVRYEVV 79

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L +  LG  + +  + +V     + ++P T+VP RN IFL  A   A  L  
Sbjct: 80  -------TLSIGKLGGSALTDNSLDVPDYGGNESIPITYVPARNTIFLSIALGWAEILDA 132

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKL 183
            +I+IG    DYSGYPDCR + I A +   NL  +       + +  PL+ L K ET KL
Sbjct: 133 ESILIGASAIDYSGYPDCRPEYIAAFQNLANLATKRGIEGHSIKIEAPLIHLSKAETIKL 192

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
              +G      +    + +CY    +     G  C  C +C LR+KG+ E + K
Sbjct: 193 GYSLG------VDYSMTVSCYRANEE-----GLACGYCDSCELRKKGFKEAEIK 235


>gi|224582293|ref|YP_002636091.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|110816258|sp|Q57SA8|QUEC_SALCH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764380|sp|C0Q7Y0|QUEC_SALPC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|224466820|gb|ACN44650.1| hypothetical protein SPC_0469 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 231

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 91/230 (39%), Positives = 136/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL+ A  ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       +   + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A+NLGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+ EE+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYWGQ---LDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213


>gi|312964531|ref|ZP_07778787.1| queuosine biosynthesis protein queC [Escherichia coli 2362-75]
 gi|312290765|gb|EFR18642.1| queuosine biosynthesis protein queC [Escherichia coli 2362-75]
          Length = 231

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 90/230 (39%), Positives = 136/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       + + + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A++LGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWSLA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+  E+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213


>gi|167856371|ref|ZP_02479098.1| queuosine biosynthesis protein QueC [Haemophilus parasuis 29755]
 gi|167852509|gb|EDS23796.1| queuosine biosynthesis protein QueC [Haemophilus parasuis 29755]
          Length = 219

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 90/235 (38%), Positives = 135/235 (57%), Gaps = 22/235 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +K  P A ++FSGGQDS+TCL  A+  F  + VE ++F YGQR+ +EL+    + + +  
Sbjct: 1   MKPTPKAAVIFSGGQDSTTCLFLAIKEFGKENVEAVTFQYGQRHAIELDKARWIAQDLG- 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     +  ++  +++  I+ ++L  + A   Q  N PNTFV GRN +FL++ A  
Sbjct: 60  ---------VKQTLIDTSVIKAITANALMDDQAEIKQTGNTPNTFVDGRNALFLLYTAIY 110

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A   GI  I  GVCETD+S YPDCR   I+++   +NL M+ +  + TPLM+L K ETW 
Sbjct: 111 AKSQGIQTIYTGVCETDFSSYPDCRDVFIKSMNVTLNLAMDYNFNIRTPLMYLTKKETWA 170

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           LA  +G     + I   +HTCYLG          GC++CP+C LR+KG  E+ E+
Sbjct: 171 LADQLGAF---DYIRTHTHTCYLGVEG-------GCHTCPSCLLREKGLNEYLEE 215


>gi|308049940|ref|YP_003913506.1| preQ(0) biosynthesis protein QueC [Ferrimonas balearica DSM 9799]
 gi|307632130|gb|ADN76432.1| preQ(0) biosynthesis protein QueC [Ferrimonas balearica DSM 9799]
          Length = 233

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 96/236 (40%), Positives = 146/236 (61%), Gaps = 21/236 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +     A+++FSGGQDS+TCL  AL  +D V  ++FDYGQR+  E+E    +  ++    
Sbjct: 1   MSDKRIAVVVFSGGQDSTTCLVQALTHYDEVHAITFDYGQRHAQEIEVAKTLATELGVKA 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                      ++ +++LG+++ S+LT++   VA ++ DN LPNTFVPGRNI+FL  A  
Sbjct: 61  ---------HKVMDVSLLGELAISALTRDNIAVANELMDNGLPNTFVPGRNILFLTLAGI 111

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            AY++G   ++ GVCETD+SGYPDCR++ ++A+E A+ LGM+  +T+ TPLMWL K +TW
Sbjct: 112 YAYQVGAQTVITGVCETDFSGYPDCRNEFVQALEKALVLGMDRPLTLATPLMWLDKAQTW 171

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            LA   G    + L+ + + TCY G        G GC +CPAC LR +G  ++   
Sbjct: 172 ALADHYGT---LELVRDRTLTCYNG------VLGAGCGTCPACQLRARGLEQYLAN 218


>gi|255320800|ref|ZP_05361975.1| ExsB protein [Acinetobacter radioresistens SK82]
 gi|262379424|ref|ZP_06072580.1| queuosine biosynthesis protein queC [Acinetobacter radioresistens
           SH164]
 gi|255302177|gb|EET81419.1| ExsB protein [Acinetobacter radioresistens SK82]
 gi|262298881|gb|EEY86794.1| queuosine biosynthesis protein queC [Acinetobacter radioresistens
           SH164]
          Length = 222

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 69/236 (29%), Positives = 102/236 (43%), Gaps = 26/236 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+TCL+WA  R      +SF YGQR+  EL+    + ++       
Sbjct: 1   MRSRAIVLLSGGLDSTTCLAWAQAR-YECIAISFMYGQRSTTELDAAKALTQRAGVEHRV 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     + L  LG  + +    +V ++ Q       +VP RN IFL +A   A   
Sbjct: 60  IN--------IDLGNLGGSALTDHNIDVPVQEQSGIPVT-YVPARNTIFLSYALAAAEVF 110

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETW 181
               IVIG+   DYSGYPDCR + I A      L  +  V        TPL+ L K    
Sbjct: 111 DAEAIVIGINAVDYSGYPDCRPEFIEAFANMARLATKVGVEGKPLKFETPLLHLSKANII 170

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +L  + G      +   ++ +CY          G  C  C +C LR++G+ E   +
Sbjct: 171 RLGIEHG------VDYSQTVSCYQADD-----QGRACGQCDSCRLRKQGFQEAGIE 215


>gi|161504368|ref|YP_001571480.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|189038940|sp|A9MM16|QUEC_SALAR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|160865715|gb|ABX22338.1| hypothetical protein SARI_02479 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 231

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 94/230 (40%), Positives = 137/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL+ AL ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLAQALHQYDEVHCVTFDYGQRHRAEIDVARSLALKLGVRA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       +   + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKMLDVTLLNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A+NLGM   +   TPLMWL K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNRAVNLGMAKDIRFETPLMWLDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    +NL+ EE+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYWG---KLNLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213


>gi|168818932|ref|ZP_02830932.1| ExsB protein [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|205343967|gb|EDZ30731.1| ExsB protein [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|320084729|emb|CBY94520.1| Queuosine biosynthesis protein queC [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
          Length = 231

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 91/230 (39%), Positives = 136/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL+ A  ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARALALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       +   + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A+NLGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+ EE+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYWGQ---LDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213


>gi|259909245|ref|YP_002649601.1| queuosine biosynthesis protein QueC [Erwinia pyrifoliae Ep1/96]
 gi|224964867|emb|CAX56389.1| Queuosine biosynthesis protein [Erwinia pyrifoliae Ep1/96]
 gi|283479295|emb|CAY75211.1| Queuosine biosynthesis protein queC ) [Erwinia pyrifoliae DSM
           12163]
          Length = 231

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 94/233 (40%), Positives = 136/233 (58%), Gaps = 22/233 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E+E    +   +        
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALQQYDEVHCVTFDYGQRHRAEIEVAQQLSTSLGVRA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++     A     + LP+TFVPGRNI+F  FA+  AY
Sbjct: 58  -----HKVLDVTMLNELAVSSLTRDNIPVPAYNPAASGLPSTFVPGRNIVFFTFASIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    IV G CETD+SGYPDCR + ++A+  AINLGM   + + TPLMWL K ETW LA
Sbjct: 113 QIEAEAIVTGACETDFSGYPDCRDEFVKALNQAINLGMARELRIETPLMWLNKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                   + LI  ++ TCY G        G GC  C AC+LR +G  E+++ 
Sbjct: 173 DYWQQ---LPLIRHQTLTCYNGI------IGDGCGDCAACHLRARGLSEYQQN 216


>gi|215485525|ref|YP_002327956.1| queuosine biosynthesis protein QueC [Escherichia coli O127:H6 str.
           E2348/69]
 gi|254764334|sp|B7UJR7|QUEC_ECO27 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|215263597|emb|CAS07927.1| predicted aluminum resistance protein [Escherichia coli O127:H6
           str. E2348/69]
          Length = 231

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 90/230 (39%), Positives = 136/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       + + + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A++LGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+  E+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213


>gi|56414389|ref|YP_151464.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197363309|ref|YP_002142946.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|81360136|sp|Q5PFP1|QUEC_SALPA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764381|sp|B5BD76|QUEC_SALPK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|56128646|gb|AAV78152.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197094786|emb|CAR60319.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 231

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 90/230 (39%), Positives = 135/230 (58%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL+ A  ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARALALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       +   + +PNTFVPGRNI+FL   A  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNILFLTLVAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A+NLGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+ EE+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYWGQ---LDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213


>gi|87308580|ref|ZP_01090720.1| ExsB protein [Blastopirellula marina DSM 3645]
 gi|87288672|gb|EAQ80566.1| ExsB protein [Blastopirellula marina DSM 3645]
          Length = 234

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 70/244 (28%), Positives = 105/244 (43%), Gaps = 31/244 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DS+T L+ A  +   +  L+F YGQR++ E+E      K          D
Sbjct: 3   KAIVLLSGGLDSTTMLAIAKSQGFTISALTFAYGQRHQSEVESARRTAKAFNVQDHTVID 62

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL---PNTFVPGRNIIFLVFAATLAYRL 126
                  + L   G  + + +      +  D      P T+VP RN IFL +A  +A   
Sbjct: 63  -------IDLRAFGGSALTDMIDVPKDRTLDEMTAAIPITYVPARNTIFLSYALAIAEVR 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLKKYET 180
              +I IGV   DY+GYPDCR + + A +   NL     V       +HTPL+   K E 
Sbjct: 116 EAFDIFIGVNSLDYAGYPDCRPEYVSAFQAMANLATAQAVGSGPQLNIHTPLIHKPKAEI 175

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW----MEFKE 236
            +   ++G      +    + +CY          G  C  C AC LR++G+     E   
Sbjct: 176 IQAGIELG------VDYSTTVSCYEA-----NGDGRACGHCDACILRRQGFQQCGQEDPT 224

Query: 237 KYQD 240
           +Y D
Sbjct: 225 RYVD 228


>gi|238893393|ref|YP_002918127.1| queuosine biosynthesis protein QueC [Klebsiella pneumoniae
           NTUH-K2044]
 gi|238545709|dbj|BAH62060.1| putative (aluminum) resistance protein [Klebsiella pneumoniae
           subsp. pneumoniae NTUH-K2044]
          Length = 233

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 91/230 (39%), Positives = 135/230 (58%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  K+  +     
Sbjct: 2   KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGAVA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       +     +PNTFVPGRNI+FL   A  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDNIPVPDYQPDAEGIPNTFVPGRNILFLTLTAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    I+ GVCETD+SGYPDCR + ++A+  A++LGM   +   TPLMWL K ETW LA
Sbjct: 113 QVKAEAIITGVCETDFSGYPDCRDEFVKALHHAVSLGMAKDIRFETPLMWLNKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+  E+ TCY G +      G GC  C AC LR  G  ++
Sbjct: 173 DYWGQ---LDLVRRETLTCYNGIK------GDGCGQCAACNLRANGRNQY 213


>gi|170680140|ref|YP_001742588.1| queuosine biosynthesis protein QueC [Escherichia coli SMS-3-5]
 gi|300937061|ref|ZP_07151927.1| ExsB protein [Escherichia coli MS 21-1]
 gi|254764344|sp|B1LJK1|QUEC_ECOSM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|170517858|gb|ACB16036.1| queuosine biosynthesis protein QueC [Escherichia coli SMS-3-5]
 gi|300457892|gb|EFK21385.1| ExsB protein [Escherichia coli MS 21-1]
          Length = 231

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 90/230 (39%), Positives = 136/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       + + + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A++LGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+  E+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213


>gi|238795535|ref|ZP_04639050.1| Queuosine biosynthesis protein queC [Yersinia mollaretii ATCC
           43969]
 gi|238720654|gb|EEQ12455.1| Queuosine biosynthesis protein queC [Yersinia mollaretii ATCC
           43969]
          Length = 232

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 89/226 (39%), Positives = 128/226 (56%), Gaps = 17/226 (7%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  ++     K  
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRAEIDVARELATQLGAKAHKVL 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL--PNTFVPGRNIIFLVFAATLAYRL 126
           D      +  L  L   S +     V    +D+    P+TFVPGRNI+FL  AA  AY++
Sbjct: 62  D------VGMLNELAVSSLTRDNIPVPTYNEDDTDTVPSTFVPGRNILFLTLAAIYAYQV 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               ++ GVCETD+SGYPDCR + ++A+  AI+LG+   +   TPLMWL K ETW LA  
Sbjct: 116 QAQAVITGVCETDFSGYPDCRDEFVKALNHAIDLGIGRDIAFITPLMWLDKAETWALAD- 174

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
                 ++L+   + TCY G +      G GC  C AC+LR KG  
Sbjct: 175 --YYQQLDLVRNHTLTCYNGIQ------GDGCGECAACHLRAKGLE 212


>gi|281177615|dbj|BAI53945.1| conserved hypothetical protein [Escherichia coli SE15]
          Length = 231

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 90/230 (39%), Positives = 136/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       + + + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A++LGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+  E+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213


>gi|94500712|ref|ZP_01307242.1| putative regulator protein [Oceanobacter sp. RED65]
 gi|94427267|gb|EAT12247.1| putative regulator protein [Oceanobacter sp. RED65]
          Length = 220

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 59/230 (25%), Positives = 100/230 (43%), Gaps = 27/230 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A++++SGG DS T L+  +     V  L+F+YGQ++  E+E    V +++       
Sbjct: 3   QEKAVVIYSGGMDSFTLLNKVVKEGYDVYALTFNYGQKHVKEVEVAKTVCQQLN------ 56

Query: 68  KDSLGEDHILPLAILGDISHSS----LTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                   IL ++ + ++  SS      +      +  N+ +T VP RN+I L  A   A
Sbjct: 57  ----VPHKILDISPINELMQSSSLVGSEEVPEGHYEAENMKSTVVPNRNMILLSLAIGYA 112

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +  + +  G    D++ YPDCR + + A+     +    HV++ TP +   K E  K 
Sbjct: 113 VDIKASKVYYGAHSGDHAIYPDCRPEFVHAMNAVAGIANYEHVSIETPYLNSSKGEILKD 172

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
              +G      L  E + TCY G+          C  C AC  R + + E
Sbjct: 173 GLSMG------LSYEHTWTCYNGREK-------ACGKCGACVERLEAFEE 209


>gi|312171581|emb|CBX79839.1| Queuosine biosynthesis protein queC ) [Erwinia amylovora ATCC
           BAA-2158]
          Length = 231

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 93/233 (39%), Positives = 136/233 (58%), Gaps = 22/233 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +   +        
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALQQYDEVHCVTFDYGQRHRAEIDVARQLSTSLGVRA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++     A     + LP+TFVPGRNI+F  FA+  AY
Sbjct: 58  -----HKVLDVTMLNELAVSSLTRDNIPVPAYNPAASGLPSTFVPGRNIVFFTFASIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    IV G CETD+SGYPDCR++ + A+  AINLGM   + + TPLMWL K ETW LA
Sbjct: 113 QIEAQAIVTGACETDFSGYPDCRNEFVNALNQAINLGMARELRIETPLMWLNKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                   + LI  ++ TCY G        G GC  C AC+LR +G  E+++ 
Sbjct: 173 DYW---HQLPLIRHQTLTCYNGI------IGDGCGDCAACHLRARGLSEYQQN 216


>gi|168465550|ref|ZP_02699432.1| ExsB protein [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|195631864|gb|EDX50384.1| ExsB protein [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
          Length = 231

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 91/230 (39%), Positives = 135/230 (58%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL+ A  ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARALALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       +     +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPNAGGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A+NLGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+ EE+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYWGQ---LDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213


>gi|16759435|ref|NP_455052.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16763836|ref|NP_459451.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|29142793|ref|NP_806135.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|167990440|ref|ZP_02571540.1| ExsB protein [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168231444|ref|ZP_02656502.1| ExsB protein [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|194472229|ref|ZP_03078213.1| ExsB protein [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|197247660|ref|YP_002145436.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197262901|ref|ZP_03162975.1| ExsB protein [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|198243409|ref|YP_002214409.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200391103|ref|ZP_03217714.1| ExsB protein [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|207855935|ref|YP_002242586.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|213027386|ref|ZP_03341833.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
 gi|213160787|ref|ZP_03346497.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213425849|ref|ZP_03358599.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213586412|ref|ZP_03368238.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213612961|ref|ZP_03370787.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213645998|ref|ZP_03376051.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213850131|ref|ZP_03381029.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|289829268|ref|ZP_06546880.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|81416443|sp|Q7CR22|QUEC_SALTY RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|81499330|sp|Q8XEU3|QUEC_SALTI RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764374|sp|B5EXJ5|QUEC_SALA4 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764375|sp|B5FKW0|QUEC_SALDC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764376|sp|B5QU45|QUEC_SALEP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|25325301|pir||AB0559 conserved hypothetical protein ybaX [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16418962|gb|AAL19410.1| putative (aluminum) resistance protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|16501726|emb|CAD08914.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29138425|gb|AAO69995.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|194458593|gb|EDX47432.1| ExsB protein [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|197211363|gb|ACH48760.1| ExsB protein [Salmonella enterica subsp. enterica serovar Agona
           str. SL483]
 gi|197241156|gb|EDY23776.1| ExsB protein [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|197937925|gb|ACH75258.1| ExsB protein [Salmonella enterica subsp. enterica serovar Dublin
           str. CT_02021853]
 gi|199603548|gb|EDZ02094.1| ExsB protein [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|205330946|gb|EDZ17710.1| ExsB protein [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205333976|gb|EDZ20740.1| ExsB protein [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|206707738|emb|CAR32023.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|261245738|emb|CBG23535.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267992172|gb|ACY87057.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301157066|emb|CBW16550.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312911488|dbj|BAJ35462.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321226033|gb|EFX51084.1| Queuosine Biosynthesis QueC ATPase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|323128775|gb|ADX16205.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|326622158|gb|EGE28503.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|332987404|gb|AEF06387.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 231

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 91/230 (39%), Positives = 136/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL+ A  ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARALALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       +   + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A+NLGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+ EE+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYWGQ---LDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213


>gi|319957259|ref|YP_004168522.1| preq(0) biosynthesis protein quec [Nitratifractor salsuginis DSM
           16511]
 gi|319419663|gb|ADV46773.1| preQ(0) biosynthesis protein QueC [Nitratifractor salsuginis DSM
           16511]
          Length = 225

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 74/235 (31%), Positives = 113/235 (48%), Gaps = 28/235 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKW 67
             A+ + SGG DS+   + A      +  + F+YGQR  + ELEC   + + +       
Sbjct: 2   KKAVCIISGGMDSAVSAALAKREGYEIIAVHFNYGQRTERKELECFRLLAEDLEA----- 56

Query: 68  KDSLGEDHILPLAIL---GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                E + + L      G  + +  + +V  +  +  +P T+VP RN IFL  AA +A 
Sbjct: 57  ----VERYEIDLPFFTQIGASALTDPSIDVPTEGLEPGVPVTYVPFRNGIFLSIAAAIAE 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWK 182
           + G   IVIGV E D SGYPDCR   IRA+E AINLG +    +T+  PL+ L+K E   
Sbjct: 113 KHGAEAIVIGVVEEDSSGYPDCRESYIRAMEKAINLGTKEETKITIKMPLVHLRKSEIVT 172

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            A +IG      + L  + +CY  +          C  C +C LR +G+ +   +
Sbjct: 173 KALEIG------VDLSHTWSCYKEEEA-------ACGVCDSCRLRLEGFKQAGVE 214


>gi|146387132|pdb|2PG3|A Chain A, Crystal Structure Of Hypothetical Protein (Yp_049261.1)
           From Erwinia Carotovora Subsp. Atroseptica Scri1043 At
           2.40 A Resolution
          Length = 232

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 88/232 (37%), Positives = 133/232 (57%), Gaps = 22/232 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  +D V  ++FDYGQR++ E+E    + +K+        
Sbjct: 3   KRAVVVFSGGQDSTTCLIQALQDYDDVHCITFDYGQRHRAEIEVAQELSQKLGAAA---- 58

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++             +PNTFVPGRNI+FL  A+  AY
Sbjct: 59  -----HKVLDVGLLNELATSSLTRDSIPVPDYDANAQGIPNTFVPGRNILFLTLASIYAY 113

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++G   ++ GVCETD+SGYPDCR + ++A+  AI LG+   +   TPL WL K ETW LA
Sbjct: 114 QVGAEAVITGVCETDFSGYPDCRDEFVKALNQAIVLGIARDIRFETPLXWLNKAETWALA 173

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
                   ++ +   + TCY G +      G GC  C AC+LR  G  ++++
Sbjct: 174 D---YYQQLDTVRYHTLTCYNGIK------GDGCGQCAACHLRANGLAQYQK 216


>gi|161615349|ref|YP_001589314.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167551728|ref|ZP_02345481.1| ExsB protein [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|238911414|ref|ZP_04655251.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|189038941|sp|A9MWC2|QUEC_SALPB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|161364713|gb|ABX68481.1| hypothetical protein SPAB_03120 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|205323472|gb|EDZ11311.1| ExsB protein [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
          Length = 231

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 91/230 (39%), Positives = 136/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL+ A  ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARDLALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       +   + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A+NLGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+ EE+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYWGQ---LDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213


>gi|50120094|ref|YP_049261.1| queuosine biosynthesis protein QueC [Pectobacterium atrosepticum
           SCRI1043]
 gi|81645861|sp|Q6D820|QUEC_ERWCT RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|49610620|emb|CAG74065.1| conserved hypothetical protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 231

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 89/232 (38%), Positives = 134/232 (57%), Gaps = 22/232 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  +D V  ++FDYGQR++ E+E    + +K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALQDYDDVHCITFDYGQRHRAEIEVAQELSQKLGAAA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++             +PNTFVPGRNI+FL  A+  AY
Sbjct: 58  -----HKVLDVGLLNELATSSLTRDSIPVPDYDANAQGIPNTFVPGRNILFLTLASIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++G   ++ GVCETD+SGYPDCR + ++A+  AI LG+   +   TPLMWL K ETW LA
Sbjct: 113 QVGAEAVITGVCETDFSGYPDCRDEFVKALNQAIVLGIARDIRFETPLMWLNKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
                   ++ +   + TCY G +      G GC  C AC+LR  G  ++++
Sbjct: 173 D---YYQQLDTVRYHTLTCYNGIK------GDGCGQCAACHLRANGLAQYQK 215


>gi|145298761|ref|YP_001141602.1| hypothetical protein ASA_1775 [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|254764293|sp|A4SLT2|QUEC_AERS4 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|142851533|gb|ABO89854.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 237

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 91/223 (40%), Positives = 133/223 (59%), Gaps = 15/223 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  +D V  ++FDYGQR++ E+E    +  +      K  
Sbjct: 4   KKAVVVFSGGQDSTTCLVQALAHYDEVHAITFDYGQRHREEIETARRLATQFGIAAHKVM 63

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D      +  L  L   + +     V+ ++QDN LPNTFVPGRNI+FL  A+  AY++G 
Sbjct: 64  D------VTLLNELAVSALTRDEIPVSGELQDNGLPNTFVPGRNILFLTLASIYAYQVGA 117

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++ GVCETD+SGYPDCR + ++++  A++LG++  +   TPLMWL K ETW LA   G
Sbjct: 118 EAVITGVCETDFSGYPDCRDEFVKSLNQAVSLGLDRCIRFETPLMWLDKAETWALADYYG 177

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
               +  + +++ TCY G        G GC +CPAC LR +G 
Sbjct: 178 H---LETVRQQTLTCYNGI------AGDGCGTCPACELRSRGL 211


>gi|292487476|ref|YP_003530348.1| queuosine biosynthesis protein QueC [Erwinia amylovora CFBP1430]
 gi|292898718|ref|YP_003538087.1| hypothetical protein EAM_0999 [Erwinia amylovora ATCC 49946]
 gi|291198566|emb|CBJ45674.1| conserved hypothetical protein [Erwinia amylovora ATCC 49946]
 gi|291552895|emb|CBA19940.1| Queuosine biosynthesis protein queC ) [Erwinia amylovora CFBP1430]
          Length = 231

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 92/233 (39%), Positives = 136/233 (58%), Gaps = 22/233 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +   +        
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALQQYDEVHCVTFDYGQRHRAEIDVARQLSTLLGVRA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++     A     + LP+TFVPGRN++F  FA+  AY
Sbjct: 58  -----HKVLDVTMLNELAVSSLTRDNIPVPAYNPAASGLPSTFVPGRNLVFFTFASIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    IV G CETD+SGYPDCR++ + A+  AINLGM   + + TPLMWL K ETW LA
Sbjct: 113 QIEAQAIVTGACETDFSGYPDCRNEFVNALNQAINLGMARELRIETPLMWLNKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                   + LI  ++ TCY G        G GC  C AC+LR +G  E+++ 
Sbjct: 173 DYW---HQLPLIRHQTLTCYNGI------IGDGCGDCAACHLRARGLSEYQQN 216


>gi|26246455|ref|NP_752494.1| queuosine biosynthesis protein QueC [Escherichia coli CFT073]
 gi|91209518|ref|YP_539504.1| queuosine biosynthesis protein QueC [Escherichia coli UTI89]
 gi|110640705|ref|YP_668433.1| queuosine biosynthesis protein QueC [Escherichia coli 536]
 gi|117622704|ref|YP_851617.1| queuosine biosynthesis protein QueC [Escherichia coli APEC O1]
 gi|191173679|ref|ZP_03035203.1| queuosine biosynthesis protein QueC [Escherichia coli F11]
 gi|194435436|ref|ZP_03067614.1| queuosine biosynthesis protein QueC [Shigella dysenteriae 1012]
 gi|218557354|ref|YP_002390267.1| queuosine biosynthesis protein QueC [Escherichia coli S88]
 gi|218688308|ref|YP_002396520.1| queuosine biosynthesis protein QueC [Escherichia coli ED1a]
 gi|218698644|ref|YP_002406273.1| queuosine biosynthesis protein QueC [Escherichia coli IAI39]
 gi|218703728|ref|YP_002411247.1| queuosine biosynthesis protein QueC [Escherichia coli UMN026]
 gi|227884545|ref|ZP_04002350.1| transcriptional regulator [Escherichia coli 83972]
 gi|237707561|ref|ZP_04538042.1| queuosine biosynthesis protein queC [Escherichia sp. 3_2_53FAA]
 gi|293403565|ref|ZP_06647656.1| queuosine biosynthesis protein QueC [Escherichia coli FVEC1412]
 gi|293413699|ref|ZP_06656348.1| exsB protein [Escherichia coli B185]
 gi|298379177|ref|ZP_06989058.1| queuosine biosynthesis protein QueC [Escherichia coli FVEC1302]
 gi|300900515|ref|ZP_07118682.1| ExsB protein [Escherichia coli MS 198-1]
 gi|300987956|ref|ZP_07178472.1| ExsB protein [Escherichia coli MS 45-1]
 gi|300997367|ref|ZP_07181707.1| ExsB protein [Escherichia coli MS 200-1]
 gi|301049651|ref|ZP_07196600.1| ExsB protein [Escherichia coli MS 185-1]
 gi|306813088|ref|ZP_07447281.1| queuosine biosynthesis protein QueC [Escherichia coli NC101]
 gi|331645629|ref|ZP_08346732.1| ExsB protein [Escherichia coli M605]
 gi|331656501|ref|ZP_08357463.1| ExsB protein [Escherichia coli TA206]
 gi|331661825|ref|ZP_08362748.1| ExsB protein [Escherichia coli TA143]
 gi|331681839|ref|ZP_08382472.1| ExsB protein [Escherichia coli H299]
 gi|81478067|sp|Q8FKA4|QUEC_ECOL6 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|110816225|sp|Q1RF91|QUEC_ECOUT RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|118574284|sp|Q0TKJ7|QUEC_ECOL5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|167016427|sp|A1A8B3|QUEC_ECOK1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764335|sp|B7MDA3|QUEC_ECO45 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764338|sp|B7NJ50|QUEC_ECO7I RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764339|sp|B7MQG0|QUEC_ECO81 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764342|sp|B7N8Z8|QUEC_ECOLU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|26106853|gb|AAN79038.1|AE016756_221 Hypothetical protein ybaX [Escherichia coli CFT073]
 gi|91071092|gb|ABE05973.1| hypothetical protein YbaX [Escherichia coli UTI89]
 gi|110342297|gb|ABG68534.1| putative (aluminum) resistance protein [Escherichia coli 536]
 gi|115511828|gb|ABI99902.1| conserved hypothetical protein [Escherichia coli APEC O1]
 gi|190906037|gb|EDV65652.1| queuosine biosynthesis protein QueC [Escherichia coli F11]
 gi|194416322|gb|EDX32513.1| queuosine biosynthesis protein QueC [Shigella dysenteriae 1012]
 gi|218364123|emb|CAR01788.1| queuosine biosynthesis protein [Escherichia coli S88]
 gi|218368630|emb|CAR16369.1| queuosine biosynthesis protein [Escherichia coli IAI39]
 gi|218425872|emb|CAR06678.1| queuosine biosynthesis protein [Escherichia coli ED1a]
 gi|218430825|emb|CAR11699.1| queuosine biosynthesis protein [Escherichia coli UMN026]
 gi|222032239|emb|CAP74978.1| Queuosine biosynthesis protein queC [Escherichia coli LF82]
 gi|226898771|gb|EEH85030.1| queuosine biosynthesis protein queC [Escherichia sp. 3_2_53FAA]
 gi|227838631|gb|EEJ49097.1| transcriptional regulator [Escherichia coli 83972]
 gi|284920254|emb|CBG33313.1| queuosine biosynthesis protein [Escherichia coli 042]
 gi|291429418|gb|EFF02438.1| queuosine biosynthesis protein QueC [Escherichia coli FVEC1412]
 gi|291433757|gb|EFF06730.1| exsB protein [Escherichia coli B185]
 gi|294490301|gb|ADE89057.1| queuosine biosynthesis protein QueC [Escherichia coli IHE3034]
 gi|298280290|gb|EFI21794.1| queuosine biosynthesis protein QueC [Escherichia coli FVEC1302]
 gi|300298588|gb|EFJ54973.1| ExsB protein [Escherichia coli MS 185-1]
 gi|300304186|gb|EFJ58706.1| ExsB protein [Escherichia coli MS 200-1]
 gi|300355996|gb|EFJ71866.1| ExsB protein [Escherichia coli MS 198-1]
 gi|300407626|gb|EFJ91164.1| ExsB protein [Escherichia coli MS 45-1]
 gi|305853851|gb|EFM54290.1| queuosine biosynthesis protein QueC [Escherichia coli NC101]
 gi|307552351|gb|ADN45126.1| queuosine biosynthesis protein QueC [Escherichia coli ABU 83972]
 gi|307628086|gb|ADN72390.1| queuosine biosynthesis protein QueC [Escherichia coli UM146]
 gi|312945022|gb|ADR25849.1| queuosine biosynthesis protein QueC [Escherichia coli O83:H1 str.
           NRG 857C]
 gi|315289838|gb|EFU49228.1| ExsB protein [Escherichia coli MS 110-3]
 gi|315294222|gb|EFU53573.1| ExsB protein [Escherichia coli MS 153-1]
 gi|315299543|gb|EFU58791.1| ExsB protein [Escherichia coli MS 16-3]
 gi|320178274|gb|EFW53248.1| Queuosine Biosynthesis QueC ATPase [Shigella boydii ATCC 9905]
 gi|320197082|gb|EFW71701.1| Queuosine Biosynthesis QueC ATPase [Escherichia coli WV_060327]
 gi|323191364|gb|EFZ76627.1| queuosine biosynthesis protein queC [Escherichia coli RN587/1]
 gi|323952944|gb|EGB48812.1| exsB protein [Escherichia coli H252]
 gi|323958637|gb|EGB54340.1| exsB protein [Escherichia coli H263]
 gi|324010075|gb|EGB79294.1| ExsB protein [Escherichia coli MS 57-2]
 gi|324010658|gb|EGB79877.1| ExsB protein [Escherichia coli MS 60-1]
 gi|330910238|gb|EGH38748.1| queuosine Biosynthesis QueC ATPase [Escherichia coli AA86]
 gi|331044381|gb|EGI16508.1| ExsB protein [Escherichia coli M605]
 gi|331054749|gb|EGI26758.1| ExsB protein [Escherichia coli TA206]
 gi|331060247|gb|EGI32211.1| ExsB protein [Escherichia coli TA143]
 gi|331081041|gb|EGI52206.1| ExsB protein [Escherichia coli H299]
 gi|332085803|gb|EGI90967.1| queuosine biosynthesis protein queC [Shigella dysenteriae 155-74]
 gi|332094600|gb|EGI99646.1| queuosine biosynthesis protein queC [Shigella boydii 5216-82]
          Length = 231

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 90/230 (39%), Positives = 136/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       + + + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A++LGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+  E+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213


>gi|168261107|ref|ZP_02683080.1| ExsB protein [Salmonella enterica subsp. enterica serovar Hadar
           str. RI_05P066]
 gi|205350003|gb|EDZ36634.1| ExsB protein [Salmonella enterica subsp. enterica serovar Hadar
           str. RI_05P066]
          Length = 231

 Score =  163 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 91/230 (39%), Positives = 136/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL+ A  ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARALALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       +   + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNILFLTLAAVYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A+NLGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+ EE+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYWGQ---LDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213


>gi|24111828|ref|NP_706338.1| queuosine biosynthesis protein QueC [Shigella flexneri 2a str. 301]
 gi|30061946|ref|NP_836117.1| queuosine biosynthesis protein QueC [Shigella flexneri 2a str.
           2457T]
 gi|74311024|ref|YP_309443.1| queuosine biosynthesis protein QueC [Shigella sonnei Ss046]
 gi|82542932|ref|YP_406879.1| queuosine biosynthesis protein QueC [Shigella boydii Sb227]
 gi|157156536|ref|YP_001461631.1| queuosine biosynthesis protein QueC [Escherichia coli E24377A]
 gi|157159971|ref|YP_001457289.1| queuosine biosynthesis protein QueC [Escherichia coli HS]
 gi|187730250|ref|YP_001879155.1| queuosine biosynthesis protein QueC [Shigella boydii CDC 3083-94]
 gi|188491966|ref|ZP_02999236.1| queuosine biosynthesis protein QueC [Escherichia coli 53638]
 gi|191168270|ref|ZP_03030064.1| queuosine biosynthesis protein QueC [Escherichia coli B7A]
 gi|193064187|ref|ZP_03045271.1| queuosine biosynthesis protein QueC [Escherichia coli E22]
 gi|193067732|ref|ZP_03048699.1| queuosine biosynthesis protein QueC [Escherichia coli E110019]
 gi|194429020|ref|ZP_03061552.1| queuosine biosynthesis protein QueC [Escherichia coli B171]
 gi|209917661|ref|YP_002291745.1| queuosine biosynthesis protein QueC [Escherichia coli SE11]
 gi|260842645|ref|YP_003220423.1| putative aluminum resistance protein [Escherichia coli O103:H2 str.
           12009]
 gi|293418515|ref|ZP_06660950.1| exsB protein [Escherichia coli B088]
 gi|300818224|ref|ZP_07098435.1| ExsB protein [Escherichia coli MS 107-1]
 gi|300820310|ref|ZP_07100462.1| ExsB protein [Escherichia coli MS 119-7]
 gi|300903288|ref|ZP_07121216.1| ExsB protein [Escherichia coli MS 84-1]
 gi|301301595|ref|ZP_07207730.1| ExsB protein [Escherichia coli MS 124-1]
 gi|307312178|ref|ZP_07591814.1| exsB protein [Escherichia coli W]
 gi|309794823|ref|ZP_07689244.1| ExsB protein [Escherichia coli MS 145-7]
 gi|312970541|ref|ZP_07784722.1| queuosine biosynthesis protein queC [Escherichia coli 1827-70]
 gi|331666800|ref|ZP_08367674.1| ExsB protein [Escherichia coli TA271]
 gi|331676116|ref|ZP_08376828.1| ExsB protein [Escherichia coli H591]
 gi|81723704|sp|Q83M51|QUEC_SHIFL RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|110816259|sp|Q325F7|QUEC_SHIBS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|110816261|sp|Q3Z4V4|QUEC_SHISS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|167016425|sp|A7ZIK2|QUEC_ECO24 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|167016426|sp|A7ZXA2|QUEC_ECOHS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764343|sp|B6HZQ1|QUEC_ECOSE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764385|sp|B2U4P9|QUEC_SHIB3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|24050620|gb|AAN42045.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|30040190|gb|AAP15923.1| hypothetical protein S0395 [Shigella flexneri 2a str. 2457T]
 gi|73854501|gb|AAZ87208.1| conserved hypothetical protein [Shigella sonnei Ss046]
 gi|81244343|gb|ABB65051.1| conserved hypothetical protein [Shigella boydii Sb227]
 gi|157065651|gb|ABV04906.1| queuosine biosynthesis protein QueC [Escherichia coli HS]
 gi|157078566|gb|ABV18274.1| queuosine biosynthesis protein QueC [Escherichia coli E24377A]
 gi|187427242|gb|ACD06516.1| queuosine biosynthesis protein QueC [Shigella boydii CDC 3083-94]
 gi|188487165|gb|EDU62268.1| queuosine biosynthesis protein QueC [Escherichia coli 53638]
 gi|190901730|gb|EDV61485.1| queuosine biosynthesis protein QueC [Escherichia coli B7A]
 gi|192929216|gb|EDV82826.1| queuosine biosynthesis protein QueC [Escherichia coli E22]
 gi|192959144|gb|EDV89580.1| queuosine biosynthesis protein QueC [Escherichia coli E110019]
 gi|194412957|gb|EDX29247.1| queuosine biosynthesis protein QueC [Escherichia coli B171]
 gi|209910920|dbj|BAG75994.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|257757792|dbj|BAI29289.1| predicted aluminum resistance protein [Escherichia coli O103:H2
           str. 12009]
 gi|281599784|gb|ADA72768.1| Queuosine biosynthesis protein queC [Shigella flexneri 2002017]
 gi|291325043|gb|EFE64458.1| exsB protein [Escherichia coli B088]
 gi|300404583|gb|EFJ88121.1| ExsB protein [Escherichia coli MS 84-1]
 gi|300527095|gb|EFK48164.1| ExsB protein [Escherichia coli MS 119-7]
 gi|300529115|gb|EFK50177.1| ExsB protein [Escherichia coli MS 107-1]
 gi|300843092|gb|EFK70852.1| ExsB protein [Escherichia coli MS 124-1]
 gi|306907680|gb|EFN38182.1| exsB protein [Escherichia coli W]
 gi|308121476|gb|EFO58738.1| ExsB protein [Escherichia coli MS 145-7]
 gi|310337190|gb|EFQ02328.1| queuosine biosynthesis protein queC [Escherichia coli 1827-70]
 gi|313646929|gb|EFS11386.1| queuosine biosynthesis protein queC [Shigella flexneri 2a str.
           2457T]
 gi|315059724|gb|ADT74051.1| predicted aluminum resistance protein [Escherichia coli W]
 gi|315256272|gb|EFU36240.1| ExsB protein [Escherichia coli MS 85-1]
 gi|320186074|gb|EFW60819.1| Queuosine Biosynthesis QueC ATPase [Shigella flexneri CDC 796-83]
 gi|320201688|gb|EFW76264.1| Queuosine Biosynthesis QueC ATPase [Escherichia coli EC4100B]
 gi|323160445|gb|EFZ46393.1| queuosine biosynthesis protein queC [Escherichia coli E128010]
 gi|323164247|gb|EFZ50054.1| queuosine biosynthesis protein queC [Shigella sonnei 53G]
 gi|323170531|gb|EFZ56181.1| queuosine biosynthesis protein queC [Escherichia coli LT-68]
 gi|323184725|gb|EFZ70096.1| queuosine biosynthesis protein queC [Escherichia coli 1357]
 gi|323379711|gb|ADX51979.1| exsB protein [Escherichia coli KO11]
 gi|323938630|gb|EGB34879.1| exsB protein [Escherichia coli E1520]
 gi|323945350|gb|EGB41406.1| exsB protein [Escherichia coli H120]
 gi|324016695|gb|EGB85914.1| ExsB protein [Escherichia coli MS 117-3]
 gi|324116932|gb|EGC10845.1| exsB protein [Escherichia coli E1167]
 gi|331066024|gb|EGI37908.1| ExsB protein [Escherichia coli TA271]
 gi|331076174|gb|EGI47456.1| ExsB protein [Escherichia coli H591]
 gi|332098666|gb|EGJ03632.1| queuosine biosynthesis protein queC [Shigella boydii 3594-74]
 gi|332341808|gb|AEE55142.1| queuosine biosynthesis protein QueC [Escherichia coli UMNK88]
 gi|332760735|gb|EGJ91023.1| queuosine biosynthesis protein queC [Shigella flexneri 4343-70]
 gi|332761453|gb|EGJ91735.1| queuosine biosynthesis protein queC [Shigella flexneri 2747-71]
 gi|332763743|gb|EGJ93981.1| queuosine biosynthesis protein queC [Shigella flexneri K-671]
 gi|332768366|gb|EGJ98550.1| 7-cyano-7-deazaguanine synthase [Shigella flexneri 2930-71]
 gi|333008015|gb|EGK27491.1| queuosine biosynthesis protein queC [Shigella flexneri K-218]
 gi|333008130|gb|EGK27605.1| queuosine biosynthesis protein queC [Shigella flexneri VA-6]
 gi|333010905|gb|EGK30331.1| queuosine biosynthesis protein queC [Shigella flexneri K-272]
 gi|333020707|gb|EGK39967.1| queuosine biosynthesis protein queC [Shigella flexneri K-227]
 gi|333021903|gb|EGK41151.1| queuosine biosynthesis protein queC [Shigella flexneri K-304]
          Length = 231

 Score =  163 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 90/230 (39%), Positives = 136/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       + + + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A++LGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+  E+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213


>gi|331671990|ref|ZP_08372786.1| ExsB protein [Escherichia coli TA280]
 gi|331070979|gb|EGI42338.1| ExsB protein [Escherichia coli TA280]
          Length = 231

 Score =  163 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 91/230 (39%), Positives = 136/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       K + + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYKPEADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A++LGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+  E+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213


>gi|194445512|ref|YP_002039698.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|254764379|sp|B4SWU8|QUEC_SALNS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|194404175|gb|ACF64397.1| ExsB protein [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
          Length = 231

 Score =  163 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 91/230 (39%), Positives = 136/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL+ A  ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARDLALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       +   + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A+NLGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+ EE+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYWGQ---LDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213


>gi|82775647|ref|YP_401994.1| queuosine biosynthesis protein QueC [Shigella dysenteriae Sd197]
 gi|309787039|ref|ZP_07681651.1| queuosine biosynthesis protein queC [Shigella dysenteriae 1617]
 gi|110816260|sp|Q32JK2|QUEC_SHIDS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|81239795|gb|ABB60505.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
 gi|308924617|gb|EFP70112.1| queuosine biosynthesis protein queC [Shigella dysenteriae 1617]
          Length = 231

 Score =  163 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 91/230 (39%), Positives = 137/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       + + + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A++LGM  H+   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKHIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+  E+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213


>gi|298492860|ref|YP_003723037.1| exsB protein ['Nostoc azollae' 0708]
 gi|298234778|gb|ADI65914.1| exsB protein ['Nostoc azollae' 0708]
          Length = 224

 Score =  163 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 70/235 (29%), Positives = 103/235 (43%), Gaps = 29/235 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DSST L  A         +SFDY Q++  EL+  + V K +  +  +  +
Sbjct: 2   KAVILLSGGLDSSTVLYQARADGCECYAISFDYQQQHCRELQSAVLVGKSVGVVQHQVVN 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    L + G  + +     +           N+P T+VP RN IFL FA   A  
Sbjct: 62  -------FDLRLWGGSALTDDAIALPQARSLDEMSQNIPVTYVPARNTIFLSFALGYAEV 114

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYET 180
           +    + IGV   DYSGYPDCR D I+A++    LG +       + +  PL+ LKK E 
Sbjct: 115 IAAERVYIGVNALDYSGYPDCRPDYIQAMQEVFRLGTKQGREGQPINIIAPLVNLKKTEI 174

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            +L   +G      +  E + +CY G           C  C +C LR   + E  
Sbjct: 175 IQLGNQLG------VPWELTWSCYAGGDK-------ACGVCDSCRLRLAAFAELG 216


>gi|293408594|ref|ZP_06652433.1| exsB protein [Escherichia coli B354]
 gi|291471772|gb|EFF14255.1| exsB protein [Escherichia coli B354]
          Length = 231

 Score =  163 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 91/230 (39%), Positives = 136/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       K + + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYKPEADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A++LGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+  E+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213


>gi|310766851|gb|ADP11801.1| queuosine biosynthesis protein QueC [Erwinia sp. Ejp617]
          Length = 231

 Score =  163 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 94/233 (40%), Positives = 136/233 (58%), Gaps = 22/233 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E+E    +   +        
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALQQYDEVHCVTFDYGQRHRAEIEVAQQLSTSLGVRA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++     A     + LP+TFVPGRNI+F  FA+  AY
Sbjct: 58  -----HKVLDVTMLNELAVSSLTRDNIPVPAYNSAASGLPSTFVPGRNIVFFTFASIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    IV G CETD+SGYPDCR + ++A+  AINLGM   + + TPLMWL K ETW LA
Sbjct: 113 QIEAEAIVTGACETDFSGYPDCRDEFVKALNQAINLGMARELRIETPLMWLNKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                   + LI  ++ TCY G        G GC  C AC+LR +G  E+++ 
Sbjct: 173 DYWQQ---LPLIRHQTLTCYNGI------IGDGCGDCAACHLRARGLSEYQQN 216


>gi|154150640|ref|YP_001404258.1| exsB protein [Candidatus Methanoregula boonei 6A8]
 gi|167016434|sp|A7I7A4|QUEC_METB6 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|153999192|gb|ABS55615.1| exsB protein [Methanoregula boonei 6A8]
          Length = 217

 Score =  163 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 27/231 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+L+ SGG DS+T L   +D+   V  ++FDY Q++K E+ C      K+         
Sbjct: 2   KAVLILSGGMDSTTLLYDLIDQGYEVSAITFDYHQKHKKEIACAQKTCAKLS-------- 53

Query: 70  SLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 I+ L++L D++ SSLT+           + ++  T VP RN++FL  AA+ A  
Sbjct: 54  --IPHKIVNLSVLNDLAPSSLTRADRDVPEGHYAEESMKQTVVPNRNMVFLSLAASYAIG 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G  ++       D++ YPDCR   + A+ TA +L   + + +  P + L K +  K   
Sbjct: 112 IGAGHLFYAAHAGDHAIYPDCRPVFVSAMSTAFHLCDWNDLVLQVPYLMLSKGDIAKKGI 171

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            +G      +    + +CY GK          C  C AC  R + + E   
Sbjct: 172 GLG------VDYANTWSCYKGKERS-------CGKCGACTERLEAFREAGA 209


>gi|300924171|ref|ZP_07140163.1| ExsB protein [Escherichia coli MS 182-1]
 gi|301330689|ref|ZP_07223291.1| ExsB protein [Escherichia coli MS 78-1]
 gi|300419624|gb|EFK02935.1| ExsB protein [Escherichia coli MS 182-1]
 gi|300843350|gb|EFK71110.1| ExsB protein [Escherichia coli MS 78-1]
          Length = 231

 Score =  163 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 90/230 (39%), Positives = 136/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       + + + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A++LGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+  E+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213


>gi|256020416|ref|ZP_05434281.1| queuosine biosynthesis protein QueC [Shigella sp. D9]
 gi|332281595|ref|ZP_08394008.1| aluminum resistance protein [Shigella sp. D9]
 gi|332103947|gb|EGJ07293.1| aluminum resistance protein [Shigella sp. D9]
          Length = 231

 Score =  163 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 90/230 (39%), Positives = 136/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       + + + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A++LGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+  E+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213


>gi|237730421|ref|ZP_04560902.1| queuosine biosynthesis protein QueC [Citrobacter sp. 30_2]
 gi|226905960|gb|EEH91878.1| queuosine biosynthesis protein QueC [Citrobacter sp. 30_2]
          Length = 231

 Score =  163 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 92/230 (40%), Positives = 137/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL+ AL ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLAQALHQYDEVHCVTFDYGQRHRAEIDVARDLALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       +   N +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLSELAVSSLTRDNIPVPDYEPDANGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A++LGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVQAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+ EE+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYWG---KLDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213


>gi|271499603|ref|YP_003332628.1| exsB protein [Dickeya dadantii Ech586]
 gi|270343158|gb|ACZ75923.1| exsB protein [Dickeya dadantii Ech586]
          Length = 231

 Score =  163 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 89/232 (38%), Positives = 137/232 (59%), Gaps = 22/232 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           SA+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +   +         
Sbjct: 3   SAVVVFSGGQDSTTCLIQALQQYDEVHCVTFDYGQRHRAEIDVAAELAHTLGARA----- 57

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQD----NNLPNTFVPGRNIIFLVFAATLAYR 125
                 +L + +L +++ SSLT++     +     + LP+TFVPGRNI+FL  A+  AY+
Sbjct: 58  ----HKVLNVNLLNELAVSSLTRDNIPVPEFDATVDGLPSTFVPGRNILFLTLASIYAYQ 113

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G   ++ GVCETD+SGYPDCR + ++A+  A+ LG+   +   TPLMWL K ETW LA 
Sbjct: 114 VGAETVITGVCETDFSGYPDCRDEFVKALNQAVALGLAKDIRFITPLMWLNKAETWALAD 173

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                  ++ +   + TCY G +      G GC  C AC+LR KG  E+++ 
Sbjct: 174 ---YYQQLDTVQNHTLTCYNGIK------GTGCGQCAACHLRAKGLAEYRQN 216


>gi|119469470|ref|ZP_01612374.1| putative regulator protein [Alteromonadales bacterium TW-7]
 gi|119447005|gb|EAW28275.1| putative regulator protein [Alteromonadales bacterium TW-7]
          Length = 218

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 19/226 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++++SGG DS T L+ AL +   V  LSFDYGQR+  EL+    V +K+      
Sbjct: 1   MTQKVVVIYSGGMDSFTVLNKALQQGHDVYALSFDYGQRHVKELKVAAQVCEKLNVPHKI 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              S     I      G  S +          ++ ++ +T VP RN+I L  A   A  L
Sbjct: 61  VDISAINQLI------GGSSLTDNIDVPEGHYEEESMKSTIVPNRNMILLSLAVGYAVSL 114

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
             + +  G    D++ YPDCR + ++ ++    +     V + +P +   K +       
Sbjct: 115 KASQVYYGAHSGDHAIYPDCRPEFVQKMDDVCRIANYDAVEIFSPYLNNTKIDILTDGIK 174

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
           +G      L   ++ TCY G+          C  C AC  R + + 
Sbjct: 175 MG------LDYSQTWTCYNGREK-------ACGKCGACQERLEAFA 207


>gi|168240285|ref|ZP_02665217.1| ExsB protein [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|194447743|ref|YP_002044490.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|205351765|ref|YP_002225566.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|254764377|sp|B5R6V6|QUEC_SALG2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764378|sp|B4T9F0|QUEC_SALHS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|194406047|gb|ACF66266.1| ExsB protein [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|205271546|emb|CAR36365.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205340377|gb|EDZ27141.1| ExsB protein [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|326626800|gb|EGE33143.1| ExsB protein [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9]
          Length = 231

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 91/230 (39%), Positives = 136/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL+ A  ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARALALKLGTRA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       +   + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A+NLGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+ EE+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYWGQ---LDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213


>gi|146310572|ref|YP_001175646.1| queuosine biosynthesis protein QueC [Enterobacter sp. 638]
 gi|145317448|gb|ABP59595.1| preQ(0) biosynthesis protein QueC [Enterobacter sp. 638]
          Length = 242

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 91/241 (37%), Positives = 135/241 (56%), Gaps = 25/241 (10%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M   +     A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  K+
Sbjct: 8   MRLFM---KRAVVVFSGGQDSTTCLIQALHQYDEVHCVTFDYGQRHRAEIDVARELALKL 64

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFL 116
                          +L + +L +++ SSLT++       +   + +PNTFVPGRNI+FL
Sbjct: 65  GARA---------HKVLDVTLLNELAVSSLTRDSIPVPDYEPDADGIPNTFVPGRNILFL 115

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
              A  AY++    I+ GVCETD+SGYPDCR + ++A+  A++LGM   +   TPLMWL 
Sbjct: 116 TLTAIYAYQVKAEAIITGVCETDFSGYPDCRDEFVKALNHAVDLGMAKEIRFETPLMWLD 175

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           K ETW LA      + + L+  E+ TCY G +      G GC  C AC LR  G   +  
Sbjct: 176 KAETWALADYW---EKLELVRTETLTCYNGIK------GDGCGQCAACNLRSNGLNHYLA 226

Query: 237 K 237
            
Sbjct: 227 N 227


>gi|302036609|ref|YP_003796931.1| queuosine biosynthesis protein queC [Candidatus Nitrospira
           defluvii]
 gi|300604673|emb|CBK41005.1| Queuosine biosynthesis protein QueC [Candidatus Nitrospira
           defluvii]
          Length = 232

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 73/240 (30%), Positives = 104/240 (43%), Gaps = 26/240 (10%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +    P A++L SGG DS+   + A     R+  L+  YGQR+ VE+E    V + +   
Sbjct: 1   MTHVDPKAVILLSGGLDSTVTAAIAKQDGYRLYCLTISYGQRHHVEVERARAVAQALSAA 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN---NLPNTFVPGRNIIFLVFAA 120
                D       + L   G  + +        + Q++    +P T+VP RN IFL  A 
Sbjct: 61  AHVVVD-------VDLRAFGGSALTDDVTVPKDRTQEDRAGGIPVTYVPARNTIFLSLAL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWL 175
             A  L    I  G    DYSGYPDCR D I A ET   LG +       V V  PL+ L
Sbjct: 114 AYAETLEAQRIYFGANVLDYSGYPDCRPDFIHAFETVARLGTKIGMEGRSVEVCAPLLML 173

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K E  +  Q++         LE +H+CY    D     G  C  C +C +R++G+    
Sbjct: 174 SKAEIVQRGQEL------RAPLELTHSCYDPGAD-----GVACGRCDSCRIRREGFRLAG 222


>gi|22124941|ref|NP_668364.1| queuosine biosynthesis protein QueC [Yersinia pestis KIM 10]
 gi|45440630|ref|NP_992169.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51595316|ref|YP_069507.1| queuosine biosynthesis protein QueC [Yersinia pseudotuberculosis IP
           32953]
 gi|108808636|ref|YP_652552.1| queuosine biosynthesis protein QueC [Yersinia pestis Antiqua]
 gi|108811105|ref|YP_646872.1| queuosine biosynthesis protein QueC [Yersinia pestis Nepal516]
 gi|145600044|ref|YP_001164120.1| queuosine biosynthesis protein QueC [Yersinia pestis Pestoides F]
 gi|149365004|ref|ZP_01887039.1| queuosine biosynthesis protein queC [Yersinia pestis CA88-4125]
 gi|153948926|ref|YP_001402045.1| queuosine biosynthesis protein QueC [Yersinia pseudotuberculosis IP
           31758]
 gi|162419001|ref|YP_001607412.1| queuosine biosynthesis protein QueC [Yersinia pestis Angola]
 gi|165926543|ref|ZP_02222375.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165936090|ref|ZP_02224660.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166011014|ref|ZP_02231912.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166213075|ref|ZP_02239110.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|167398760|ref|ZP_02304284.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167421566|ref|ZP_02313319.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167423798|ref|ZP_02315551.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167468479|ref|ZP_02333183.1| queuosine biosynthesis protein QueC [Yersinia pestis FV-1]
 gi|170025444|ref|YP_001721949.1| queuosine biosynthesis protein QueC [Yersinia pseudotuberculosis
           YPIII]
 gi|186894333|ref|YP_001871445.1| queuosine biosynthesis protein QueC [Yersinia pseudotuberculosis
           PB1/+]
 gi|218930180|ref|YP_002348055.1| queuosine biosynthesis protein QueC [Yersinia pestis CO92]
 gi|229838753|ref|ZP_04458912.1| enzyme in preQ0 biosynthesis [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229896093|ref|ZP_04511263.1| enzyme in preQ0 biosynthesis [Yersinia pestis Pestoides A]
 gi|229899321|ref|ZP_04514464.1| enzyme in preQ0 biosynthesis [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229901335|ref|ZP_04516457.1| enzyme in preQ0 biosynthesis [Yersinia pestis Nepal516]
 gi|270489520|ref|ZP_06206594.1| protein ExsB [Yersinia pestis KIM D27]
 gi|294504882|ref|YP_003568944.1| hypothetical protein YPZ3_2772 [Yersinia pestis Z176003]
 gi|81593863|sp|Q8ZC72|QUEC_YERPE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|81640198|sp|Q66DS7|QUEC_YERPS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|118574294|sp|Q1C4L5|QUEC_YERPA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|118574295|sp|Q1CL58|QUEC_YERPN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|167016457|sp|A7FLB7|QUEC_YERP3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|167016458|sp|A4TPD5|QUEC_YERPP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764395|sp|B2K6W4|QUEC_YERPB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764396|sp|A9QZP5|QUEC_YERPG RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764397|sp|B1JHR4|QUEC_YERPY RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|21957781|gb|AAM84615.1|AE013707_3 hypothetical protein y1034 [Yersinia pestis KIM 10]
 gi|45435487|gb|AAS61046.1| Predicted ATPase (PP-loop superfamily), confers aluminum resistance
           [Yersinia pestis biovar Microtus str. 91001]
 gi|51588598|emb|CAH20206.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
           32953]
 gi|108774753|gb|ABG17272.1| hypothetical protein YPN_0940 [Yersinia pestis Nepal516]
 gi|108780549|gb|ABG14607.1| hypothetical protein YPA_2645 [Yersinia pestis Antiqua]
 gi|115348791|emb|CAL21745.1| conserved hypothetical protein [Yersinia pestis CO92]
 gi|145211740|gb|ABP41147.1| hypothetical protein YPDSF_2785 [Yersinia pestis Pestoides F]
 gi|149291417|gb|EDM41491.1| queuosine biosynthesis protein queC [Yersinia pestis CA88-4125]
 gi|152960421|gb|ABS47882.1| queuosine biosynthesis protein QueC [Yersinia pseudotuberculosis IP
           31758]
 gi|162351816|gb|ABX85764.1| queuosine biosynthesis protein QueC [Yersinia pestis Angola]
 gi|165916235|gb|EDR34842.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165921471|gb|EDR38668.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165990014|gb|EDR42315.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166205862|gb|EDR50342.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|166960485|gb|EDR56506.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167051264|gb|EDR62672.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167057968|gb|EDR67714.1| queuosine biosynthesis protein QueC [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169751978|gb|ACA69496.1| exsB protein [Yersinia pseudotuberculosis YPIII]
 gi|186697359|gb|ACC87988.1| exsB protein [Yersinia pseudotuberculosis PB1/+]
 gi|229681264|gb|EEO77358.1| enzyme in preQ0 biosynthesis [Yersinia pestis Nepal516]
 gi|229687723|gb|EEO79796.1| enzyme in preQ0 biosynthesis [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229695119|gb|EEO85166.1| enzyme in preQ0 biosynthesis [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229701016|gb|EEO89045.1| enzyme in preQ0 biosynthesis [Yersinia pestis Pestoides A]
 gi|262362947|gb|ACY59668.1| hypothetical protein YPD4_2761 [Yersinia pestis D106004]
 gi|262366867|gb|ACY63424.1| hypothetical protein YPD8_2751 [Yersinia pestis D182038]
 gi|270338024|gb|EFA48801.1| protein ExsB [Yersinia pestis KIM D27]
 gi|294355341|gb|ADE65682.1| hypothetical protein YPZ3_2772 [Yersinia pestis Z176003]
 gi|320016335|gb|ADV99906.1| enzyme in preQ0 biosynthesis [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 232

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 92/236 (38%), Positives = 135/236 (57%), Gaps = 23/236 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  ++        
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRTEIDVARELALQLGATA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVA-----MKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  +L + +L +++ SSLT++           D  LP+TFVPGRNI+FL  A+  A
Sbjct: 58  -----HKVLDVGMLNELAVSSLTRDSIPVPSYDANADGALPSTFVPGRNILFLTLASIYA 112

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           Y++    ++ GVCETD+SGYPDCR + I+A+  AI+LG+   +   TPLMWL K ETW L
Sbjct: 113 YQVQAQAVITGVCETDFSGYPDCRDEFIKALNHAIDLGIGRDIAFITPLMWLDKAETWAL 172

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           A        ++LI   + TCY G +      G GC  C AC+LR KG   +    Q
Sbjct: 173 AD---YYQQLDLIRHHTLTCYNGIK------GDGCGQCAACHLRAKGLASYMANKQ 219


>gi|309700705|emb|CBJ00001.1| queuosine biosynthesis protein [Escherichia coli ETEC H10407]
          Length = 231

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 90/230 (39%), Positives = 136/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       + + + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A++LGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+  E+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRASGLNHY 213


>gi|152979669|ref|YP_001345298.1| exsB protein [Actinobacillus succinogenes 130Z]
 gi|189038890|sp|A6VQW6|QUEC_ACTSZ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|150841392|gb|ABR75363.1| exsB protein [Actinobacillus succinogenes 130Z]
          Length = 235

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 84/232 (36%), Positives = 142/232 (61%), Gaps = 22/232 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
              A+++FSGGQDS+TCL  A+  +  + VE ++F YGQR+ +EL+    + + +     
Sbjct: 9   NRKAVVIFSGGQDSTTCLLQAIRDYGPNNVEAVTFQYGQRHAIELQKAQWIAQDLG---- 64

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  +  ++  +++  I+ +++  +  +K  +N +PNTFV GRN +FL++AA  A  
Sbjct: 65  ------VKQTLIDTSVIKTITTNAMMSDAQIKQDENGMPNTFVDGRNALFLLYAAIYAKG 118

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            GIT+I+ GVCETD+SGYPDCR+  I+++   +NL M+    + TPLM+L K +TW+LA 
Sbjct: 119 QGITDIITGVCETDFSGYPDCRNVFIKSMNVTLNLAMDYQFNIRTPLMYLTKAQTWQLAD 178

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           ++G    ++ + + +HTCYLG          GC +CP+C LR+KG  ++  +
Sbjct: 179 ELGA---LDYVRQYTHTCYLGVEG-------GCGTCPSCLLREKGLKQYLAQ 220


>gi|260887290|ref|ZP_05898553.1| ExsB protein [Selenomonas sputigena ATCC 35185]
 gi|330838956|ref|YP_004413536.1| exsB protein [Selenomonas sputigena ATCC 35185]
 gi|260862926|gb|EEX77426.1| ExsB protein [Selenomonas sputigena ATCC 35185]
 gi|329746720|gb|AEC00077.1| exsB protein [Selenomonas sputigena ATCC 35185]
          Length = 224

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 70/238 (29%), Positives = 109/238 (45%), Gaps = 32/238 (13%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+TC++ A ++   +  +SFDY QR+ +ELE    +            
Sbjct: 2   EKAVVLLSGGLDSTTCMAVAKEQGKELYPISFDYHQRHSIELEGAKKIA----------A 51

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN----TFVPGRNIIFLVFAATLAY 124
                 H++    +  I  S+LT +     + +        T+VP RN+IFL +A   A 
Sbjct: 52  FYKVNRHLIIETNMEAIGGSALTDDSIAVPEGDVSRTSVPVTYVPARNLIFLSYALGYAE 111

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYE 179
            +G  ++ IGV   DYSGYPDCR + IR  +   +   E       + + TPL  L K +
Sbjct: 112 TIGARSVYIGVNSVDYSGYPDCRPEFIRHFQAVADYSTEAASEGKRIEIVTPLQNLSKAD 171

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
             +LA  +       + LE +H+CY G           C  C +C LR +G+     K
Sbjct: 172 IVRLATRL------AVPLELTHSCYSGGEK-------ACGVCDSCKLRLQGFAAAGIK 216


>gi|170767792|ref|ZP_02902245.1| queuosine biosynthesis protein QueC [Escherichia albertii TW07627]
 gi|170123280|gb|EDS92211.1| queuosine biosynthesis protein QueC [Escherichia albertii TW07627]
          Length = 231

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 90/230 (39%), Positives = 134/230 (58%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L  ++ SSLT++       +   + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNQLAVSSLTRDSIPVPDYEPDADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A++LGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+  E+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYYG---KLDLVRSETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213


>gi|329296788|ref|ZP_08254124.1| queuosine biosynthesis protein QueC [Plautia stali symbiont]
          Length = 231

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 92/233 (39%), Positives = 136/233 (58%), Gaps = 22/233 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E+     +  ++        
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALQQYDEVHCVTFDYGQRHREEISVAAQLAHQLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++     A   Q + LP+TFVPGRNI+FL  A+  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPAYNPQASGLPSTFVPGRNILFLTLASIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A++LGM   V   TPLMWL K ETW LA
Sbjct: 113 QVEAEAVITGVCETDFSGYPDCRDEFVKALNNAVSLGMAREVRFETPLMWLNKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                  LV     E+ TCY G +      G GC  C AC+LR +G  +++  
Sbjct: 173 DYWQQLPLVR---SETLTCYNGVK------GDGCGECAACHLRARGLADYRAN 216


>gi|157369345|ref|YP_001477334.1| queuosine biosynthesis protein QueC [Serratia proteamaculans 568]
 gi|167016451|sp|A8GAR6|QUEC_SERP5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|157321109|gb|ABV40206.1| exsB protein [Serratia proteamaculans 568]
          Length = 232

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 88/229 (38%), Positives = 130/229 (56%), Gaps = 13/229 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E+E    +   +     K  
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALKQYDEVHCVTFDYGQRHRAEIEVAQELSVALGAKAHKLL 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D      +L    +  ++  ++        Q N LP+TFVPGRNI+FL  AA  AY++  
Sbjct: 62  DVG----LLNELAISSLTRDNIPVPAYDSTQSNGLPSTFVPGRNILFLTLAAIYAYQVEA 117

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++ GVCETD+SGYPDCR + ++A+  AI LG+   +   TPLMWL K ETW LA    
Sbjct: 118 EAVITGVCETDFSGYPDCRDEFVKALNQAIVLGIARDIRFETPLMWLNKAETWALAD--- 174

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
               + L+ +++ TCY G +      G GC  C AC+LR  G  +++  
Sbjct: 175 YYHQLELVQQDTLTCYNGIK------GNGCGECAACHLRANGLQQYQIN 217


>gi|295096770|emb|CBK85860.1| preQ(0) biosynthesis protein QueC [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 231

 Score =  162 bits (410), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 89/230 (38%), Positives = 133/230 (57%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALHQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       +   + +PNTFVPGRNI+FL   A  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPDASGIPNTFVPGRNILFLTLTAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A++LGM       TPLMWL K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVDLGMAKETRFETPLMWLDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++++  E+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYWG---KLDVVRNETLTCYNGIK------GDGCGQCAACNLRANGLNHY 213


>gi|168237570|ref|ZP_02662628.1| ExsB protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|194735041|ref|YP_002113486.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|254764382|sp|B4TMD3|QUEC_SALSV RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|194710543|gb|ACF89764.1| ExsB protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197289471|gb|EDY28834.1| ExsB protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
          Length = 231

 Score =  162 bits (410), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 91/230 (39%), Positives = 135/230 (58%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL+ A  ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARALALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       +   + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A+NLGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    + L+ EE+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYWGQ---LELVREETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213


>gi|194366887|ref|YP_002029497.1| exsB protein [Stenotrophomonas maltophilia R551-3]
 gi|254764386|sp|B4ST23|QUEC_STRM5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|194349691|gb|ACF52814.1| exsB protein [Stenotrophomonas maltophilia R551-3]
          Length = 221

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 70/232 (30%), Positives = 100/232 (43%), Gaps = 25/232 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+  ++ A ++   V  LS  YGQR+  EL+    V K    +  K  
Sbjct: 2   KKAVVLLSGGMDSAAVIAMAQEQGFAVHALSVRYGQRHTSELDAAARVAKAQGVIAHKTV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D       + L  +G  + +              +P T+VP RN I L  A   A  LG 
Sbjct: 62  D-------VDLRSIGGSALTDDIDVPEAG--GAGIPVTYVPARNTIMLSLALGWAEVLGA 112

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
            +I  GV   DYSGYPDCR + + A +   NL  +S V      VH PL +L K +    
Sbjct: 113 NDIFCGVNAVDYSGYPDCRPEFVAAFQALANLATKSGVEGAGIKVHAPLQFLSKGQIVSE 172

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
              +G      +    + +CY          G  C+ C AC LR +G+ E  
Sbjct: 173 GVRLG------VDFGLTVSCYNAD-----ANGAACSHCDACRLRAQGFTEAG 213


>gi|312128629|ref|YP_003993503.1| exsb protein [Caldicellulosiruptor hydrothermalis 108]
 gi|311778648|gb|ADQ08134.1| exsB protein [Caldicellulosiruptor hydrothermalis 108]
          Length = 234

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 53/232 (22%), Positives = 96/232 (41%), Gaps = 27/232 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS+T L     +   V  +SF YGQ++  ELE        +         
Sbjct: 15  RAVVVLSGGMDSTTLLYDVKSQGYEVFAISFLYGQKHSKELEFAKKTCSLLS-------- 66

Query: 70  SLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 I+ ++   +++ S+LT            D+ +  T VP RN++ L  +A  A  
Sbjct: 67  --IPHKIVDISFFAELAPSALTTPDWDVPEGYYTDSTMKQTVVPNRNMVLLSISAAYAIS 124

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           LG   +  G    D+  YPDCR + +  ++ A+ L     + +  P + +KK +  +   
Sbjct: 125 LGAKKLFYGAHAGDHPIYPDCRKEFVEVMKNALYLADYIGLELEAPYVDMKKEDILRRGL 184

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           ++G      +    + +CY G +         C  C  C  R + + +   K
Sbjct: 185 ELG------VNYSLTWSCYKGGQK-------ACGRCGTCTERIEAFKKVGVK 223


>gi|24213033|ref|NP_710514.1| PP-loop superfamily ATPase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45656192|ref|YP_000278.1| hypothetical protein LIC10288 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|81407974|sp|Q72VK9|QUEC_LEPIC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|81471975|sp|Q8F964|QUEC_LEPIN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|24193722|gb|AAN47532.1| PP-loop superfamily ATPase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45599426|gb|AAS68915.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 242

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 81/235 (34%), Positives = 110/235 (46%), Gaps = 24/235 (10%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                A++L SGG DS+TCL  A+     ++ LSFDYGQR+K+EL     V +K+     
Sbjct: 23  SSNNKAVVLLSGGLDSTTCLYQAIADGKEIQALSFDYGQRHKIELSYAKKVTRKLGIPHT 82

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                     + P   LG              ++   +PNT+VPGRNI+FL FA +LA  
Sbjct: 83  I-------QKLKPELFLGSSLTQKSLHVPKNSLRKEEIPNTYVPGRNILFLSFAVSLAEG 135

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG-----MESHVTVHTPLMWLKKYET 180
            G  +I IGV   DYSGYPDCR + I+  E AI LG         + + TPL  L K E 
Sbjct: 136 TGSDSIYIGVNSMDYSGYPDCRPEFIKMFEMAIQLGTKKGSQGPSIKILTPLQNLSKKEI 195

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
             L   +       +    + +CY        + G  C  C AC LR+KG+ E  
Sbjct: 196 VLLGNQL------KVPFHLTFSCYDP------KNGKACGKCDACLLRKKGFQETG 238


>gi|218693907|ref|YP_002401574.1| queuosine biosynthesis protein QueC [Escherichia coli 55989]
 gi|254764336|sp|B7L681|QUEC_ECO55 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|218350639|emb|CAU96331.1| queuosine biosynthesis protein [Escherichia coli 55989]
          Length = 231

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 91/230 (39%), Positives = 137/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  K+     K  
Sbjct: 2   KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARARK-- 59

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       + + + +PNTFVPGRNI+FL  AA  AY
Sbjct: 60  -------VLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A++LGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+  E+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213


>gi|158335496|ref|YP_001516668.1| ExsB protein [Acaryochloris marina MBIC11017]
 gi|189038885|sp|B0C253|QUEC_ACAM1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|158305737|gb|ABW27354.1| ExsB protein [Acaryochloris marina MBIC11017]
          Length = 228

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 65/234 (27%), Positives = 103/234 (44%), Gaps = 24/234 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DSST L  A         +SFDY QR++ EL+  + + +       +   
Sbjct: 2   KAVVLLSGGLDSSTALYKAKADGADCYAISFDYRQRHRQELDSAVAIAQSAQVTQHQIVA 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT---FVPGRNIIFLVFAATLAYRL 126
                    L + G  + +    ++  +  +    +    +VP RN IFL FA   A  +
Sbjct: 62  -------FDLTLWGGSALTDTQIDLPSRSIEEMADHIPVTYVPARNSIFLSFALAYAETI 114

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETW 181
               + IGV + DYSGYPDCR D I+A++    LG +       + + TPL+ L K    
Sbjct: 115 SAEQVYIGVNQLDYSGYPDCRPDFIQAMQEVFRLGTKLGREGQAIEICTPLINLHKSAII 174

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           +L  D+G      +  E++ +CY    D        C  C +C LR   + +  
Sbjct: 175 ELGNDLG------VPWEQTWSCYS---DGGGSPPLACGQCDSCQLRLAAFAQLG 219


>gi|146295173|ref|YP_001178944.1| exsB protein [Caldicellulosiruptor saccharolyticus DSM 8903]
 gi|167016419|sp|A4XFR8|QUEC_CALS8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|145408749|gb|ABP65753.1| preQ(0) biosynthesis protein QueC [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 225

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 59/232 (25%), Positives = 100/232 (43%), Gaps = 27/232 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS+T L    ++     T+SF YGQ++  ELE      + +         
Sbjct: 2   RAVVVLSGGMDSTTLLYDVKNQGYETYTISFLYGQKHSKELEFAKKTCELLK-------- 53

Query: 70  SLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 I+ ++   D++ S+LTK+          D ++  T VP RN++FL  A + A  
Sbjct: 54  --VPHKIVDISFFADLAPSALTKSSWSVPEGYYTDESMKQTVVPNRNMVFLSLATSYAIS 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           L    +  G    D+  YPDCR + + A++ +I L     V +  P + LKK +  K+  
Sbjct: 112 LKAQKLFYGAHAGDHPIYPDCRKEFVEAMKRSILLCDYQIVELEAPYVDLKKEDILKIGL 171

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            +G      +    + +CY G           C  C  C  R + + +   K
Sbjct: 172 KLG------VDYSLTWSCYKGGEK-------ACGRCGTCTERIEAFRKIGVK 210


>gi|87201149|ref|YP_498406.1| ExsB [Novosphingobium aromaticivorans DSM 12444]
 gi|110816238|sp|Q2G3K1|QUEC_NOVAD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|87136830|gb|ABD27572.1| preQ(0) biosynthesis protein QueC [Novosphingobium aromaticivorans
           DSM 12444]
          Length = 233

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 75/239 (31%), Positives = 112/239 (46%), Gaps = 32/239 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           A++L SGG DS  C   A ++  RV  L+ DY QR++VEL+    +  ++          
Sbjct: 13  AVVLLSGGLDSMVCAGLAQEQGFRVLALTIDYNQRHRVELDAARAIAARLG--------- 63

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQ--DNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             E H++    L     S+LT ++A+      +++P T+VP RN+IFL  A   A   G 
Sbjct: 64  -VERHVILPLDLRQFGGSALTADIAVPKDGVGDDIPVTYVPARNLIFLSLALAWAEAAGS 122

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKKYETWKL 183
            ++ IGV   DYSGYPDCR + +   E    +  +       VTVH PL  LKK E  + 
Sbjct: 123 KDLFIGVNALDYSGYPDCRPEFVAGFEDLARIATKVGSEGGTVTVHAPLQHLKKSEIARE 182

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF----KEKY 238
           A  +G +        +S +CY          G  C  C +C LR+ G+ E       +Y
Sbjct: 183 AARLGLEAG------DSWSCYDP-----LPDGRACGVCDSCRLRRAGFEEAGLNDGTRY 230


>gi|283834237|ref|ZP_06353978.1| ExsB protein [Citrobacter youngae ATCC 29220]
 gi|291069754|gb|EFE07863.1| ExsB protein [Citrobacter youngae ATCC 29220]
          Length = 231

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 91/230 (39%), Positives = 136/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL+ AL ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLAQALHQYDEVHCVTFDYGQRHRAEIDVARDLALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       +   N +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLSELAVSSLTRDNIPVPDYEPDANGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A++LGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVQAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+  E+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYWG---KLDLVRAETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213


>gi|238754242|ref|ZP_04615599.1| Queuosine biosynthesis protein queC [Yersinia ruckeri ATCC 29473]
 gi|238707489|gb|EEP99849.1| Queuosine biosynthesis protein queC [Yersinia ruckeri ATCC 29473]
          Length = 232

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 93/234 (39%), Positives = 136/234 (58%), Gaps = 23/234 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E+E    +  ++        
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHREEIEVARKLTSQLGAKA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNL----PNTFVPGRNIIFLVFAATLA 123
                  +L + +L +++ SSLT++ + + + + N     PNTFVPGRNI+FL  AA  A
Sbjct: 58  -----HKVLDVGMLNELAVSSLTRDNIPVPVYEENSVNTLPNTFVPGRNILFLTLAAIYA 112

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           Y++    ++ GVCETD+SGYPDCR + ++A+  AINLG+   +   TPLMWL K ETW L
Sbjct: 113 YQVQAEAVITGVCETDFSGYPDCRDEFVKALNHAINLGIARDIAFITPLMWLDKAETWAL 172

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           A        + LI   + TCY G +      G GC  C AC+LR KG   +   
Sbjct: 173 AD---YYQQLELIRHHTLTCYNGVQ------GDGCGECAACHLRAKGLNNYLAN 217


>gi|94495451|ref|ZP_01302031.1| ExsB [Sphingomonas sp. SKA58]
 gi|94424839|gb|EAT09860.1| ExsB [Sphingomonas sp. SKA58]
          Length = 233

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 70/238 (29%), Positives = 106/238 (44%), Gaps = 25/238 (10%)

Query: 4   IIKKAPS-ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           ++ +    A++L SGG DS    + A +   R+  LS DY QR++VEL     V + +  
Sbjct: 1   MVARQEKFAVVLLSGGLDSMVAGALAREAGYRLFALSIDYNQRHRVELRAAARVAQALNA 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +             L L   G  + ++    V      +++P T+VP RN IFL     L
Sbjct: 61  IRHIVLP-------LDLTAFGGSALTAD-IAVPKSGVGSDIPVTYVPARNTIFLSLTLGL 112

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKK 177
           A   G ++I IGV   DYSGYPDCR + I A +    L  +       + ++TPL ++ K
Sbjct: 113 AEVAGASDIFIGVNALDYSGYPDCRPEFIDAFQKMATLATKAGVEGHPIRINTPLQYMTK 172

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            +  + A  +G      L    S +CY          G  C  C +C LR KG+ E  
Sbjct: 173 ADIAREADRLG------LDAGISWSCYDP-----TPDGKHCGLCDSCRLRSKGYQEAG 219


>gi|227113472|ref|ZP_03827128.1| queuosine biosynthesis protein QueC [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 231

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 89/231 (38%), Positives = 133/231 (57%), Gaps = 22/231 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  +D V  ++FDYGQR++ E++    + +K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALQDYDDVHCITFDYGQRHRAEIDVARELSQKLGATA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++             +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVGLLNELATSSLTRDSIPVPDYDANAQGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++G   ++ GVCETD+SGYPDCR + ++A+  AI LG+   +   TPLMWL K ETW LA
Sbjct: 113 QVGAEAVITGVCETDFSGYPDCRDEFVKALNQAIVLGIARDIRFETPLMWLNKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
                   ++ +   + TCY G +      G GC  C AC+LR  G  +++
Sbjct: 173 DH---YQQLDTVRYHTLTCYNGIK------GDGCGQCAACHLRANGLAQYQ 214


>gi|322614733|gb|EFY11662.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322618839|gb|EFY15727.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322623546|gb|EFY20385.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322629155|gb|EFY25934.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322631876|gb|EFY28630.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322637387|gb|EFY34089.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322642072|gb|EFY38682.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322647891|gb|EFY44366.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322652366|gb|EFY48721.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322653269|gb|EFY49602.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322660582|gb|EFY56818.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322664734|gb|EFY60927.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322669213|gb|EFY65363.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322670758|gb|EFY66891.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322679003|gb|EFY75058.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682032|gb|EFY78057.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322685139|gb|EFY81136.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323192967|gb|EFZ78190.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323196951|gb|EFZ82093.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323203936|gb|EFZ88953.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323206979|gb|EFZ91932.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323214182|gb|EFZ98940.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323214494|gb|EFZ99245.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323219164|gb|EGA03661.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323227000|gb|EGA11181.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323230182|gb|EGA14302.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323233920|gb|EGA18009.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323238386|gb|EGA22444.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323244073|gb|EGA28082.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323246234|gb|EGA30217.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323251860|gb|EGA35723.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323257856|gb|EGA41535.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323261130|gb|EGA44722.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323264940|gb|EGA48439.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323272503|gb|EGA55910.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 231

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 90/230 (39%), Positives = 136/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL+ A  ++D V  ++FDYGQR++ E++    +  ++        
Sbjct: 2   KRAVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARALALQLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       +   + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A+NLGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+ EE+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYWGQ---LDLVREETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213


>gi|307129934|ref|YP_003881950.1| enzyme in preQ0 biosynthesis [Dickeya dadantii 3937]
 gi|306527463|gb|ADM97393.1| enzyme in preQ0 biosynthesis [Dickeya dadantii 3937]
          Length = 231

 Score =  162 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 92/230 (40%), Positives = 135/230 (58%), Gaps = 22/230 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           SA+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    + + +         
Sbjct: 3   SAVVVFSGGQDSTTCLIQALQQYDEVHCVTFDYGQRHRAEIDVAAELAQTLGARA----- 57

Query: 70  SLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 +L + +L +++ SSLT++           + LP+TFVPGRNI+FL  A+  AY+
Sbjct: 58  ----HKVLNVGLLNELAVSSLTRDNIPVPEFDANADGLPSTFVPGRNILFLTLASIYAYQ 113

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G   ++ GVCETD+SGYPDCR + ++A+  AI LG+   +   TPLMWL K ETW LA 
Sbjct: 114 VGADTVITGVCETDFSGYPDCRDEFVKALNQAITLGLARDIRFVTPLMWLNKAETWALAD 173

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
                D V      + TCY G +      G GC  C AC+LR KG  E++
Sbjct: 174 YYQQLDTVK---NHTLTCYNGIK------GTGCGQCAACHLRAKGLAEYQ 214


>gi|91793370|ref|YP_563021.1| queuosine biosynthesis protein QueC [Shewanella denitrificans
           OS217]
 gi|123060891|sp|Q12MM8|QUEC_SHEDO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|91715372|gb|ABE55298.1| ExsB [Shewanella denitrificans OS217]
          Length = 232

 Score =  162 bits (409), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 99/228 (43%), Positives = 145/228 (63%), Gaps = 21/228 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++FSGGQDS+TCL  AL +FD V  ++FDYGQR+  E+E    +  ++         
Sbjct: 3   KAVVVFSGGQDSTTCLIQALTQFDEVHAITFDYGQRHNEEIEVAKALASQL--------- 53

Query: 70  SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +    ++ +++L +++ S+LT++   V+ ++ +N LPNTFVPGRNI+FL  A   AY+L
Sbjct: 54  RIASHKVMDVSLLNELAISALTRDDIPVSHELMENGLPNTFVPGRNILFLTLAGIYAYQL 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G  +++ GVCETD+SGYPDCR   +RA+ETA+ LGM+  + + TPLMWL K ETW LA  
Sbjct: 114 GANSVITGVCETDFSGYPDCRDQFVRAMETALCLGMDKQINLLTPLMWLNKAETWALADK 173

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
                 + L+ E + TCY G        G GC  CPAC+LRQKG  ++
Sbjct: 174 ---YHSLTLVKELTLTCYNGI------IGQGCGDCPACHLRQKGLDDY 212


>gi|301022562|ref|ZP_07186434.1| ExsB protein [Escherichia coli MS 69-1]
 gi|300397443|gb|EFJ80981.1| ExsB protein [Escherichia coli MS 69-1]
 gi|324114671|gb|EGC08639.1| exsB protein [Escherichia fergusonii B253]
          Length = 231

 Score =  162 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 90/230 (39%), Positives = 136/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       + + + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A++LGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+  E+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLHHY 213


>gi|222528233|ref|YP_002572115.1| exsB protein [Caldicellulosiruptor bescii DSM 6725]
 gi|254764298|sp|B9MMB0|QUEC_ANATD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|222455080|gb|ACM59342.1| exsB protein [Caldicellulosiruptor bescii DSM 6725]
          Length = 221

 Score =  162 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 97/232 (41%), Gaps = 27/232 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS+T L     +   V  +SF YGQ++  ELE        +         
Sbjct: 2   RAVVVLSGGMDSTTLLYDVKSQGYEVFAISFLYGQKHSKELEFAKKTCSLLS-------- 53

Query: 70  SLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 I+ ++   +++ S+LT            D+ +  T VP RN++ L  +A  A  
Sbjct: 54  --IPYKIVDISFFAELAPSALTTPDWNVPEGYYTDSTMKQTVVPNRNMVLLSISAAYAIS 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           LG   +  G    D+  YPDCR + + A++ A+ L     + +  P + +KK +  +   
Sbjct: 112 LGAKKLFYGAHAGDHPIYPDCRKEFVEAMKNALYLADYIGLELEAPYVDMKKEDILRRGL 171

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           ++G      +    + +CY G +         C  C  C  R + + +   K
Sbjct: 172 ELG------VNYSLTWSCYKGGQK-------ACGRCGTCTERIEAFKKVGVK 210


>gi|34498962|ref|NP_903177.1| hypothetical protein CV_3507 [Chromobacterium violaceum ATCC 12472]
 gi|81654693|sp|Q7NSB9|QUEC_CHRVO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|34104811|gb|AAQ61168.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 234

 Score =  162 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 103/241 (42%), Positives = 138/241 (57%), Gaps = 29/241 (12%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRK 58
           MN        AL++ SGGQDS+TCL WAL RF   +VE ++FDYGQR++VEL+C   +  
Sbjct: 1   MNQA--SDEKALVVLSGGQDSTTCLYWALRRFGAGKVEAVTFDYGQRHRVELDCARKIA- 57

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTK----NVAMKIQDNNLPNTFVPGRNII 114
                      +     +LP+     I  ++LT            D+ LPNTFVPGRN++
Sbjct: 58  ---------ALAGVRQTVLPIDTFAAIGGNALTDASIAPEEGVRDDDALPNTFVPGRNLV 108

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
           FL FAA  AY  G  ++V GV +TDYSGYPDCR +T++A+E A+ LGM+S V +HTPLM+
Sbjct: 109 FLTFAAAFAYTRGARHLVTGVAQTDYSGYPDCRENTLKALEVALRLGMDSRVELHTPLMY 168

Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           L K ET  LAQ +G  + +      SHTCY G+          C  C +C LR KG+ E 
Sbjct: 169 LSKAETVTLAQQVGALEAL----AWSHTCYNGEVPP-------CGHCASCELRAKGFAEA 217

Query: 235 K 235
            
Sbjct: 218 G 218


>gi|332305742|ref|YP_004433593.1| exsB protein [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332173071|gb|AEE22325.1| exsB protein [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 218

 Score =  162 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 55/227 (24%), Positives = 90/227 (39%), Gaps = 19/227 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                +++FSGG DS T L+ A+     V  LSF+YGQR+  EL+      K +      
Sbjct: 1   MVQKVVVIFSGGMDSFTVLNMAVKDGYEVHALSFNYGQRHSKELDYASRACKILGVAHKI 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              S   + I      G  S +S          + ++ +T VP RN+I L  A   A  L
Sbjct: 61  IDISAINELI------GGSSLTSDVDIPEGHYAEESMKSTVVPNRNMILLSMAVGYAVSL 114

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G    D+  YPDCR + +  +     +     + + +P ++  K +      +
Sbjct: 115 DANKVYYGAHSGDHDIYPDCRPEFVERMNDVCAIANYEKIEIVSPFLYQSKIDILTAGLN 174

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
           +G      L    + TCY G+          C  C AC  R + + +
Sbjct: 175 MG------LDYGLTWTCYNGREK-------ACGKCGACQERLEAFEK 208


>gi|294635330|ref|ZP_06713827.1| ExsB protein [Edwardsiella tarda ATCC 23685]
 gi|291091306|gb|EFE23867.1| ExsB protein [Edwardsiella tarda ATCC 23685]
          Length = 229

 Score =  162 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 90/230 (39%), Positives = 134/230 (58%), Gaps = 20/230 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL R+D V  ++FDYGQR++ E++    +  ++        
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALQRYDDVHCITFDYGQRHRAEIDVARNLAHQLGASA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                  +L + +L +++ SSLT++        +  +PNTFVPGRNI+FL  AA  AY++
Sbjct: 58  -----HKVLDVGLLNELAISSLTRDNIPVPTQSETGIPNTFVPGRNILFLTLAAIYAYQV 112

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               ++ GVCETD+SGYPDCR   ++A+  A++LGM   +   TPLMWL K ETW LA  
Sbjct: 113 EAEAVITGVCETDFSGYPDCRDAFVKALHHAVSLGMARDIRFETPLMWLNKAETWALADY 172

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            G  + V     ++ TCY G +      G GC  C AC+LR  G  +++ 
Sbjct: 173 YGQLERVR---HDTLTCYNGIQ------GDGCGHCAACHLRAHGLQQYQA 213


>gi|302874094|ref|YP_003842727.1| exsB protein [Clostridium cellulovorans 743B]
 gi|307689650|ref|ZP_07632096.1| exsB protein [Clostridium cellulovorans 743B]
 gi|302576951|gb|ADL50963.1| exsB protein [Clostridium cellulovorans 743B]
          Length = 222

 Score =  162 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 92/242 (38%), Positives = 142/242 (58%), Gaps = 23/242 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+  +K+    L++ SGGQDS+TCL WA+  F  V+ + F+YGQR+++EL+C   + +  
Sbjct: 1   MSSSLKEQD-ILVVLSGGQDSTTCLFWAIKNFRNVKAIGFNYGQRHELELQCARKICE-- 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT---KNVAMKIQDNNLPNTFVPGRNIIFLV 117
                   ++     +L + +L  ++ +SLT     V    +  + PN+ V GRN+IFL 
Sbjct: 58  --------ENNVSYEVLDMGLLNQLTTNSLTRKDIEVQAAKEGESTPNSLVEGRNMIFLT 109

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
           FAA  A    I +IV GV ++D+SGYPDCR   I+++   +NL M+    +HTPLMWL K
Sbjct: 110 FAAVYAKTHNIKHIVTGVSQSDFSGYPDCRDTFIKSLNVTLNLSMDYEYVIHTPLMWLDK 169

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            +TWKL+ D+G   +++ I + + TCY G        G GC  CP+C LR +G  EF +K
Sbjct: 170 CDTWKLSDDLG---VLDTIKDRTLTCYNGI------IGAGCGICPSCLLRARGLEEFYKK 220

Query: 238 YQ 239
           Y+
Sbjct: 221 YR 222


>gi|262373097|ref|ZP_06066376.1| conserved hypothetical protein [Acinetobacter junii SH205]
 gi|262313122|gb|EEY94207.1| conserved hypothetical protein [Acinetobacter junii SH205]
          Length = 226

 Score =  162 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 73/247 (29%), Positives = 109/247 (44%), Gaps = 32/247 (12%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M + ++    A++L SGG DS TCL+WA         LSF YGQR+  EL+    + ++ 
Sbjct: 1   MENNMRS--RAIVLLSGGLDSITCLAWAQAN-YDCIALSFMYGQRSTTELDAAKALAQRA 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                           + L  LG  + +    +V  ++Q+      +VP RN IFL +A 
Sbjct: 58  GVEHRVIN--------IDLGNLGGSALTDHNIDVPEQLQEGIPVT-YVPARNTIFLSYAL 108

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWL 175
             A       IVIGV   DYSGYPDCR + I A      L  ++ V      + TPL+ L
Sbjct: 109 AAAEVFDAEAIVIGVNAVDYSGYPDCRPEFIDAFANLARLATKAGVEGKPLKIETPLLHL 168

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K    +L  + G      +   ++ +CY          G  C  C +C LRQ+G++E  
Sbjct: 169 SKANIIRLGIEHG------VDYSKTVSCYQAD-----AQGRACGKCDSCRLRQQGFIEAG 217

Query: 236 ----EKY 238
                +Y
Sbjct: 218 VADPTRY 224


>gi|16128429|ref|NP_414978.1| required for 7-cyano-7-deazaguanine (preQ0) synthesis [Escherichia
           coli str. K-12 substr. MG1655]
 gi|89107314|ref|AP_001094.1| predicted aluminum resistance protein [Escherichia coli str. K-12
           substr. W3110]
 gi|170080030|ref|YP_001729350.1| enzyme in preQ0 biosynthesis [Escherichia coli str. K-12 substr.
           DH10B]
 gi|238899732|ref|YP_002925528.1| putative aluminum resistance protein [Escherichia coli BW2952]
 gi|256023937|ref|ZP_05437802.1| queuosine biosynthesis protein QueC [Escherichia sp. 4_1_40B]
 gi|260853667|ref|YP_003227558.1| putative aluminum resistance protein [Escherichia coli O26:H11 str.
           11368]
 gi|260866605|ref|YP_003233007.1| putative aluminum resistance protein [Escherichia coli O111:H- str.
           11128]
 gi|300947903|ref|ZP_07162051.1| ExsB protein [Escherichia coli MS 116-1]
 gi|300958012|ref|ZP_07170176.1| ExsB protein [Escherichia coli MS 175-1]
 gi|301025651|ref|ZP_07189171.1| ExsB protein [Escherichia coli MS 196-1]
 gi|301647370|ref|ZP_07247182.1| ExsB protein [Escherichia coli MS 146-1]
 gi|307137089|ref|ZP_07496445.1| queuosine biosynthesis protein QueC [Escherichia coli H736]
 gi|331640964|ref|ZP_08342099.1| ExsB protein [Escherichia coli H736]
 gi|2495537|sp|P77756|QUEC_ECOLI RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764341|sp|B1XFN2|QUEC_ECODH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|259551522|sp|C4ZTK1|QUEC_ECOBW RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|1580715|dbj|BAA11648.1| YbaX [Escherichia coli W3110]
 gi|1773128|gb|AAB40200.1| similar to H. influenzae HI1191 [Escherichia coli]
 gi|1786648|gb|AAC73547.1| required for 7-cyano-7-deazaguanine (preQ0) synthesis [Escherichia
           coli str. K-12 substr. MG1655]
 gi|85674584|dbj|BAE76224.1| predicted aluminum resistance protein [Escherichia coli str. K12
           substr. W3110]
 gi|169887865|gb|ACB01572.1| enzyme in preQ0 biosynthesis [Escherichia coli str. K-12 substr.
           DH10B]
 gi|238862146|gb|ACR64144.1| predicted aluminum resistance protein [Escherichia coli BW2952]
 gi|257752316|dbj|BAI23818.1| predicted aluminum resistance protein [Escherichia coli O26:H11
           str. 11368]
 gi|257762961|dbj|BAI34456.1| predicted aluminum resistance protein [Escherichia coli O111:H-
           str. 11128]
 gi|260450369|gb|ACX40791.1| exsB protein [Escherichia coli DH1]
 gi|299880032|gb|EFI88243.1| ExsB protein [Escherichia coli MS 196-1]
 gi|300315279|gb|EFJ65063.1| ExsB protein [Escherichia coli MS 175-1]
 gi|300452503|gb|EFK16123.1| ExsB protein [Escherichia coli MS 116-1]
 gi|301074515|gb|EFK89321.1| ExsB protein [Escherichia coli MS 146-1]
 gi|315135126|dbj|BAJ42285.1| queuosine biosynthesis protein QueC [Escherichia coli DH1]
 gi|315616615|gb|EFU97232.1| queuosine biosynthesis protein queC [Escherichia coli 3431]
 gi|323153481|gb|EFZ39735.1| queuosine biosynthesis protein queC [Escherichia coli EPECa14]
 gi|323178287|gb|EFZ63865.1| queuosine biosynthesis protein queC [Escherichia coli 1180]
 gi|323943251|gb|EGB39407.1| exsB protein [Escherichia coli E482]
 gi|331037762|gb|EGI09982.1| ExsB protein [Escherichia coli H736]
          Length = 231

 Score =  162 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 90/230 (39%), Positives = 135/230 (58%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       + + + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A++LGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+  E+ TCY G        G GC  C AC LR  G   +
Sbjct: 173 DYYG---KLDLVRNETLTCYNG------FKGDGCGHCAACNLRANGLNHY 213


>gi|15800174|ref|NP_286186.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7
           EDL933]
 gi|15829752|ref|NP_308525.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
           Sakai]
 gi|168747880|ref|ZP_02772902.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
           EC4113]
 gi|168754549|ref|ZP_02779556.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
           EC4401]
 gi|168760401|ref|ZP_02785408.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
           EC4501]
 gi|168768399|ref|ZP_02793406.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
           EC4486]
 gi|168777140|ref|ZP_02802147.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
           EC4196]
 gi|168778937|ref|ZP_02803944.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
           EC4076]
 gi|168786295|ref|ZP_02811302.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
           EC869]
 gi|168798008|ref|ZP_02823015.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
           EC508]
 gi|195936008|ref|ZP_03081390.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
           EC4024]
 gi|208805824|ref|ZP_03248161.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
           EC4206]
 gi|208816134|ref|ZP_03257313.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
           EC4045]
 gi|208823253|ref|ZP_03263571.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
           EC4042]
 gi|209396500|ref|YP_002269091.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
           EC4115]
 gi|217325252|ref|ZP_03441336.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
           TW14588]
 gi|254791628|ref|YP_003076465.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
           TW14359]
 gi|261223927|ref|ZP_05938208.1| enzyme in preQ0 biosynthesis [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261256359|ref|ZP_05948892.1| enzyme in preQ0 biosynthesis [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291281351|ref|YP_003498169.1| Queuosine biosynthesis protein queC [Escherichia coli O55:H7 str.
           CB9615]
 gi|81766178|sp|Q8XE52|QUEC_ECO57 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764337|sp|B5Z3V1|QUEC_ECO5E RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|12513306|gb|AAG54794.1|AE005223_9 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
 gi|13359955|dbj|BAB33921.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|187767546|gb|EDU31390.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
           EC4196]
 gi|188017662|gb|EDU55784.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
           EC4113]
 gi|189003020|gb|EDU72006.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
           EC4076]
 gi|189357982|gb|EDU76401.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
           EC4401]
 gi|189362373|gb|EDU80792.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
           EC4486]
 gi|189369159|gb|EDU87575.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
           EC4501]
 gi|189373665|gb|EDU92081.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
           EC869]
 gi|189379336|gb|EDU97752.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
           EC508]
 gi|208725625|gb|EDZ75226.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
           EC4206]
 gi|208732782|gb|EDZ81470.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
           EC4045]
 gi|208737446|gb|EDZ85130.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
           EC4042]
 gi|209157900|gb|ACI35333.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
           EC4115]
 gi|209778638|gb|ACI87631.1| hypothetical protein ECs0498 [Escherichia coli]
 gi|209778640|gb|ACI87632.1| hypothetical protein ECs0498 [Escherichia coli]
 gi|209778642|gb|ACI87633.1| hypothetical protein ECs0498 [Escherichia coli]
 gi|209778644|gb|ACI87634.1| hypothetical protein ECs0498 [Escherichia coli]
 gi|209778646|gb|ACI87635.1| hypothetical protein ECs0498 [Escherichia coli]
 gi|217321473|gb|EEC29897.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
           TW14588]
 gi|254591028|gb|ACT70389.1| enzyme in preQ0 biosynthesis [Escherichia coli O157:H7 str.
           TW14359]
 gi|290761224|gb|ADD55185.1| Queuosine biosynthesis protein queC [Escherichia coli O55:H7 str.
           CB9615]
 gi|320192860|gb|EFW67500.1| Queuosine Biosynthesis QueC ATPase [Escherichia coli O157:H7 str.
           EC1212]
 gi|320638439|gb|EFX08153.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
           G5101]
 gi|320643820|gb|EFX12943.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H- str.
           493-89]
 gi|320649171|gb|EFX17749.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H- str.
           H 2687]
 gi|320656064|gb|EFX23980.1| queuosine biosynthesis protein QueC [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320661214|gb|EFX28645.1| queuosine biosynthesis protein QueC [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320665190|gb|EFX32283.1| queuosine biosynthesis protein QueC [Escherichia coli O157:H7 str.
           LSU-61]
 gi|326341208|gb|EGD65000.1| Queuosine Biosynthesis QueC ATPase [Escherichia coli O157:H7 str.
           1044]
 gi|326346017|gb|EGD69756.1| Queuosine Biosynthesis QueC ATPase [Escherichia coli O157:H7 str.
           1125]
          Length = 231

 Score =  162 bits (408), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 89/230 (38%), Positives = 135/230 (58%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       + + + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++ +  A++LGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKVLNHAVSLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+  E+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213


>gi|226329054|ref|ZP_03804572.1| hypothetical protein PROPEN_02957 [Proteus penneri ATCC 35198]
 gi|225202240|gb|EEG84594.1| hypothetical protein PROPEN_02957 [Proteus penneri ATCC 35198]
          Length = 247

 Score =  162 bits (408), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 89/231 (38%), Positives = 142/231 (61%), Gaps = 23/231 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              +++FSGGQDS+TCL  AL+++D V  ++F+YGQR+K E+E    V + +        
Sbjct: 17  KKTVVVFSGGQDSTTCLIQALEKYDEVHCITFNYGQRHKEEIEVAQKVSQLLGATA---- 72

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVA-----MKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  +L +++L +++ SSLT++        + +++++P+TFVPGRNI+FL  AA  A
Sbjct: 73  -----HKVLDVSLLNELAISSLTRDNIPVPDFKESEESDIPSTFVPGRNILFLTLAAIYA 127

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           Y++G  +++ GVCETD+SGYPDCR + ++A+  A+NLG+   +   TPLMWL K ETW L
Sbjct: 128 YQIGAESVITGVCETDFSGYPDCRDEFVKALNHAVNLGIARDIKFITPLMWLDKAETWAL 187

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           A        ++ +  ++ TCY G +      G GC  C AC+LRQ+G   +
Sbjct: 188 AD---YYKKLDFVRHKTLTCYNGIQ------GDGCGECAACHLRQRGLNTY 229


>gi|322834039|ref|YP_004214066.1| exsB protein [Rahnella sp. Y9602]
 gi|321169240|gb|ADW74939.1| exsB protein [Rahnella sp. Y9602]
          Length = 232

 Score =  162 bits (408), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 89/233 (38%), Positives = 135/233 (57%), Gaps = 23/233 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E+E    +  ++        
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALKQYDEVHCVTFDYGQRHRAEIEIAQKLSVELGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-----TFVPGRNIIFLVFAATLA 123
                  +L + +L +++ SSLT++        +  N     TFVPGRNI+FL  AA  A
Sbjct: 58  -----HKVLDVGLLNELAVSSLTRDNIPVPNFGDENNGGLPSTFVPGRNILFLTLAAIYA 112

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           Y++    ++ GVCETD+SGYPDCR + ++A+ TA++LG+   V   TPLMWL K ETW L
Sbjct: 113 YQIQAEAVITGVCETDFSGYPDCRDEFVKALNTAVSLGLARDVRFETPLMWLNKAETWAL 172

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           A        ++L+  ++ TCY G        G GC  C AC+LR  G  ++++
Sbjct: 173 AD---YYQQLDLVRHKTLTCYNGI------AGDGCGECAACHLRANGLQQYQQ 216


>gi|261822500|ref|YP_003260606.1| queuosine biosynthesis protein QueC [Pectobacterium wasabiae
           WPP163]
 gi|261606513|gb|ACX88999.1| exsB protein [Pectobacterium wasabiae WPP163]
          Length = 231

 Score =  162 bits (408), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 90/231 (38%), Positives = 134/231 (58%), Gaps = 22/231 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  +D V  ++FDYGQR++ E+E    + +K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALQHYDDVHCITFDYGQRHRAEIEVAQELSQKLGATA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  IL + +L +++ SSLT++             +PNTFVPGRNI+FL  A+  AY
Sbjct: 58  -----HKILDVGLLNELATSSLTRDSIPVPDYDANAQGIPNTFVPGRNILFLTLASIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++G   ++ GVCETD+SGYPDCR + ++A+  AI LG+  ++   TPLMWL K ETW LA
Sbjct: 113 QVGAEAVITGVCETDFSGYPDCRDEFVKALNQAIVLGIARNIRFETPLMWLNKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
                   ++ +   + TCY G +      G GC  C AC+LR  G  +++
Sbjct: 173 D---YYQQLDTVRYHTLTCYNGIQ------GDGCGQCAACHLRANGLAQYQ 214


>gi|218709346|ref|YP_002416967.1| queuosine biosynthesis protein [Vibrio splendidus LGP32]
 gi|218322365|emb|CAV18513.1| Queuosine biosynthesis protein [Vibrio splendidus LGP32]
          Length = 218

 Score =  162 bits (408), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 100/228 (43%), Positives = 138/228 (60%), Gaps = 15/228 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   AL++FSGGQDS+TCL  AL+ +D V  ++FDYGQR+  E++  + + K++     K
Sbjct: 2   QQSKALVVFSGGQDSTTCLIDALNTYDEVHAITFDYGQRHSNEIDVAVSIGKELNVKSHK 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D      +  +  L   S +     V+ ++ +N+LPNTFVPGRNI+FL +A   AY+L
Sbjct: 62  VLD------VTAINELAISSLTRDNIPVSNELSNNDLPNTFVPGRNIVFLTYACIHAYQL 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI +IV GVCETD+SGYPDCR   IRA+  + NLGM++   + TPLMWL K ETW+LA  
Sbjct: 116 GIKDIVTGVCETDFSGYPDCRDTFIRALNLSCNLGMDNAFNIKTPLMWLNKAETWELADK 175

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
               + V    + + TCY G        G GC  CPAC LRQ G  E+
Sbjct: 176 HNKLEYVE---KNTLTCYNGI------LGKGCGECPACLLRQNGLKEY 214


>gi|293391376|ref|ZP_06635710.1| ExsB protein [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290951910|gb|EFE02029.1| ExsB protein [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 276

 Score =  162 bits (408), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 91/234 (38%), Positives = 133/234 (56%), Gaps = 23/234 (9%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIV 61
           +  +   AL++FSGGQDS+TCL  A+  F  + VE ++F YGQR+ +ELE    + + + 
Sbjct: 45  MSNQPNKALVIFSGGQDSTTCLFLAMQEFGAENVEVITFQYGQRHAIELEKARWIAQDLK 104

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                      +  +L  +++  I+H++L   N  +  +DN LPNTFV GRN +FL++AA
Sbjct: 105 ----------VKQTVLDTSVIKAITHNALMDPNAPISQKDNELPNTFVDGRNALFLLYAA 154

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
             A   GI  I  GVCETD+SGYPDCR   ++++   +NL M+    + TPLMWL K ET
Sbjct: 155 IYAKSQGIRVIYTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYPFEIRTPLMWLDKKET 214

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           W LA  +G     + I   +HTCY G          GC  CP+C LR++G   +
Sbjct: 215 WALADQLGAF---DYIRRHTHTCYNGVEG-------GCGECPSCVLRERGLKAY 258


>gi|123443335|ref|YP_001007309.1| queuosine biosynthesis protein QueC [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|167016456|sp|A1JNM3|QUEC_YERE8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|122090296|emb|CAL13162.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 232

 Score =  162 bits (408), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 88/229 (38%), Positives = 135/229 (58%), Gaps = 23/229 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  ++        
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRAEIDVARELAIQLGAKA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQ-----DNNLPNTFVPGRNIIFLVFAATLA 123
                  +L + +L +++ SSLT++           ++++P+TFVPGRNI+FL  AA  A
Sbjct: 58  -----HKVLDVGMLNELAVSSLTRDNIPVPSYSEEGEDSIPSTFVPGRNILFLTLAAIYA 112

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           Y++    ++ GVCETD+SGYPDCR + ++A+  AI+LG+   +   TPLMWL K ETW L
Sbjct: 113 YQVQAQAVITGVCETDFSGYPDCRDEFVKALNHAIDLGIGRDIAFITPLMWLDKAETWAL 172

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
           A        ++ I  ++ TCY G +      G GC  C AC+LR KG  
Sbjct: 173 AD---YYQQLDRIRHDTLTCYNGIQ------GDGCGQCAACHLRAKGLE 212


>gi|312962951|ref|ZP_07777437.1| queuosine biosynthesis protein [Pseudomonas fluorescens WH6]
 gi|311282720|gb|EFQ61315.1| queuosine biosynthesis protein [Pseudomonas fluorescens WH6]
          Length = 232

 Score =  162 bits (408), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 91/235 (38%), Positives = 141/235 (60%), Gaps = 22/235 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +  A+++FSGGQDS+TCL  AL  +D V  ++FDYGQR+  E+E    + +++      
Sbjct: 1   MSKKAVMVFSGGQDSTTCLIQALALYDEVHCITFDYGQRHVAEVEVAQKLARQLGA---- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                    ++ +++L +++ SSLT++      +    ++LP+TFVPGRNI+FL  AA  
Sbjct: 57  -----TVHKVMDVSLLNELAISSLTRDNIPVPTVNSSGDSLPSTFVPGRNILFLTLAAIY 111

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           AY++    ++ GVCETD+SGYPDCR + ++A+  A+ LGME  V + TPLMWL K ETW 
Sbjct: 112 AYQVKAETVITGVCETDFSGYPDCRDEFVKALNQALKLGMEYDVRLDTPLMWLNKAETWA 171

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           LA      D + L+ + + TCY G        G GC +C AC LR +G  ++++ 
Sbjct: 172 LADYH---DALELVRDSTLTCYNGI------IGSGCGNCDACNLRARGLSDYQQN 217


>gi|296101567|ref|YP_003611713.1| queuosine biosynthesis protein QueC [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295056026|gb|ADF60764.1| queuosine biosynthesis protein QueC [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 231

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 92/230 (40%), Positives = 133/230 (57%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLVQALHQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       K   + +PNTFVPGRNI+FL   A  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYKPDASGIPNTFVPGRNILFLTLTAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A+NLGM       TPLMWL K ETW LA
Sbjct: 113 QVQAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKETRFETPLMWLDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+  E+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYWG---KLDLVRSETLTCYNGIK------GDGCGQCAACNLRANGLNHY 213


>gi|189039057|sp|A4W7B5|QUEC_ENT38 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
          Length = 231

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 90/233 (38%), Positives = 133/233 (57%), Gaps = 22/233 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALHQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       +   + +PNTFVPGRNI+FL   A  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPDADGIPNTFVPGRNILFLTLTAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    I+ GVCETD+SGYPDCR + ++A+  A++LGM   +   TPLMWL K ETW LA
Sbjct: 113 QVKAEAIITGVCETDFSGYPDCRDEFVKALNHAVDLGMAKEIRFETPLMWLDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                 + + L+  E+ TCY G +      G GC  C AC LR  G   +   
Sbjct: 173 DYW---EKLELVRTETLTCYNGIK------GDGCGQCAACNLRSNGLNHYLAN 216


>gi|315126984|ref|YP_004068987.1| regulator protein [Pseudoalteromonas sp. SM9913]
 gi|315015498|gb|ADT68836.1| regulator protein [Pseudoalteromonas sp. SM9913]
          Length = 218

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 19/226 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++++SGG DS T L+ AL +   V  LSFDYGQR+  EL+    V +K+      
Sbjct: 1   MTQKVVVIYSGGMDSFTVLNKALQQGHDVYALSFDYGQRHVKELKVAASVCEKLNVPHKI 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              S     I      G  S +          ++ ++ +T VP RN+I L  A   A  L
Sbjct: 61  VDISAINQLI------GGSSLTDDIDVPEGHYEEESMKSTIVPNRNMILLSLAVGYAVSL 114

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
             + +  G    D++ YPDCR + ++ ++    +     V + +P +   K +       
Sbjct: 115 KASKVYYGAHSGDHAIYPDCRPEFVKKMDDVCRIANYDAVEIFSPYLNNTKIDILTDGIK 174

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
           +G      L   ++ TCY G+          C  C AC  R + + 
Sbjct: 175 MG------LDYSQTWTCYNGRDK-------ACGKCGACQERLEAFE 207


>gi|109899268|ref|YP_662523.1| exsB protein [Pseudoalteromonas atlantica T6c]
 gi|123064352|sp|Q15RL9|QUEC_PSEA6 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|109701549|gb|ABG41469.1| preQ(0) biosynthesis protein QueC [Pseudoalteromonas atlantica T6c]
          Length = 218

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 55/227 (24%), Positives = 89/227 (39%), Gaps = 19/227 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                +++FSGG DS T L+ A+     V  LSF+YGQR+  EL+        +      
Sbjct: 1   MVQKVVVIFSGGMDSFTVLNMAVKEGYEVHALSFNYGQRHSKELDYASRACITLGVAHKI 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              S   + I      G  S +S          + ++ +T VP RN+I L  A   A  L
Sbjct: 61  IDISAINELI------GGSSLTSDVDIPEGHYAEESMKSTVVPNRNMILLSMAVGYAVSL 114

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G    D+  YPDCR + +  +     +     V + +P ++  K +      +
Sbjct: 115 DANKVYYGAHSGDHDIYPDCRPEFVERMNDVCAIANYEKVEIVSPFLYQSKIDILTAGLN 174

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
           +G      L    + TCY G+          C  C AC  R + + +
Sbjct: 175 MG------LDYNLTWTCYNGREK-------ACGKCGACQERLEAFDK 208


>gi|325295563|ref|YP_004282077.1| exsB protein [Desulfurobacterium thermolithotrophum DSM 11699]
 gi|325066011|gb|ADY74018.1| exsB protein [Desulfurobacterium thermolithotrophum DSM 11699]
          Length = 233

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 77/238 (32%), Positives = 112/238 (47%), Gaps = 30/238 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           SA+++ SGG DS+T L WA   F++V  ++F YGQR+ +E+E    + KK         +
Sbjct: 3   SAIVILSGGLDSTTALYWAKKNFNKVFAITFYYGQRHSLEVEMARIIAKKAKVEEHILFE 62

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKI-----QDNNLPNTFVPGRNIIFLVFAATLAY 124
                  + ++  G  + +     V         ++  +P T+VP RN IFL  AA  A 
Sbjct: 63  -------VDISKFGGSALTDKNLEVPETQSIEEIKERGIPITYVPFRNGIFLSIAAAYAE 115

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYE 179
               TN+V G    DYSGYPDCR + + A+E A+N G +         +H PL+ L K E
Sbjct: 116 TKNTTNLVGGWNAVDYSGYPDCRPEFLAAMEEALNKGTKLGSEGKSWKIHAPLINLTKGE 175

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
             KL   +G           S +CY G           C  C +C LR KGWME  ++
Sbjct: 176 IIKLGLSLGA------DYSYSISCYRGTEVP-------CGKCDSCVLRAKGWMEVGKE 220


>gi|332884798|gb|EGK05054.1| 7-cyano-7-deazaguanine synthase [Dysgonomonas mossii DSM 22836]
          Length = 218

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 97/232 (41%), Positives = 134/232 (57%), Gaps = 21/232 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K  SAL+LFSGGQDS+TCL WAL+ F  V TL F YGQR+  E+E    + +K     
Sbjct: 1   MNKKESALVLFSGGQDSTTCLYWALENFSSVRTLCFTYGQRHSKEVEVAKSIAEKAN--- 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNV--AMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                      +L  +I+  +S +SLT ++    +   ++ PNTFVPGRN++FL FAA +
Sbjct: 58  -------VPFQLLDASIISQLSVNSLTSDIVMDQEKPADSYPNTFVPGRNLLFLTFAAVI 110

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A   GI +IV GV E DYSGYPDCR   I +   +INL M+ H  +HTPLMW  K   W+
Sbjct: 111 ARSHGIRHIVTGVSEADYSGYPDCRDTFILSANASINLAMDEHFQIHTPLMWRDKTAVWQ 170

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           LA ++G     ++I  ++ TCY G          GC  CP+C LR++G   +
Sbjct: 171 LADELGVF---DIIRTQTLTCYNGI------IADGCGHCPSCKLRKQGLNNY 213


>gi|226940053|ref|YP_002795126.1| aluminum resistance protein [Laribacter hongkongensis HLHK9]
 gi|254764355|sp|C1D6L0|QUEC_LARHH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|226714979|gb|ACO74117.1| aluminum resistance protein [Laribacter hongkongensis HLHK9]
          Length = 229

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 101/238 (42%), Positives = 134/238 (56%), Gaps = 25/238 (10%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D ++    AL++ SGGQDS+TCL WAL RF +V  +SFDYGQR++VEL+    +      
Sbjct: 2   DSLRDPEHALVVLSGGQDSTTCLYWALSRFAQVSAISFDYGQRHRVELDAARTIAAMAG- 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVF 118
                        I+P+     +  ++LT            +  LPNTFVPGRN++FL F
Sbjct: 61  ---------VGHTIIPINTFSALGGNALTDQQMSPDTGPDAETLLPNTFVPGRNLVFLTF 111

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
           AA  A+  GI +IV GV +TDYSGYPDCR +T+RA+E AINLGMES + +H PLM+L K 
Sbjct: 112 AAAWAWPRGIRHIVTGVAQTDYSGYPDCRENTLRALELAINLGMESRMRLHMPLMFLSKA 171

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           +T  LA+ +G    +      SHTCY G           C  C AC LR KG+ E   
Sbjct: 172 DTVTLARTVGAMPALAF----SHTCYAGAVPP-------CGQCAACVLRAKGFAEAGI 218


>gi|218246824|ref|YP_002372195.1| exsB protein [Cyanothece sp. PCC 8801]
 gi|218167302|gb|ACK66039.1| exsB protein [Cyanothece sp. PCC 8801]
          Length = 225

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 67/240 (27%), Positives = 107/240 (44%), Gaps = 32/240 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +     A++L SGG DS+T  + AL +   +  LS  YGQR++ EL     + K +    
Sbjct: 1   MIHQSKAVVLLSGGLDSATSAAIALSQGYHLIALSLRYGQRHEKELAAAKNIAKALD--- 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT----FVPGRNIIFLVFAA 120
                    +H +    L     S+LT       Q    PN     +VPGRN +F+  A 
Sbjct: 58  -------ITEHYIVEVNLAQWGGSALTDTALTLPQGGINPNIIPSTYVPGRNTVFIAIAL 110

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWL 175
           +LA   G T I +G+   DYSGYPDCR D ++A +   NL  ++ +      +  PL+  
Sbjct: 111 SLAEAKGATAIFLGINAVDYSGYPDCRPDYLQAYQRLANLSSKAGIEGHAPQLIAPLIND 170

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K +  + A  +G      + +E++ +CY G           C  C +C +R +  +E  
Sbjct: 171 SKVDIVRRAVSLG------VPIEDTWSCYQGGEKP-------CGLCDSCRIRDRALIEAG 217


>gi|251790642|ref|YP_003005363.1| exsB protein [Dickeya zeae Ech1591]
 gi|247539263|gb|ACT07884.1| exsB protein [Dickeya zeae Ech1591]
          Length = 231

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 90/232 (38%), Positives = 135/232 (58%), Gaps = 22/232 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           SA+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    + + +         
Sbjct: 3   SAVVVFSGGQDSTTCLIQALQQYDDVHCVTFDYGQRHRAEIDVAAALAQTLGARA----- 57

Query: 70  SLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 +L + +L +++ SSLT++           + LP+TFVPGRNI+FL  A+  AY+
Sbjct: 58  ----HKVLNVGLLNELAVSSLTRDNIPVPEFDATADGLPSTFVPGRNILFLTLASIYAYQ 113

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G   ++ GVCETD+SGYPDCR + ++A+  A+ LG+   +   TPLMWL K ETW LA 
Sbjct: 114 VGADTVITGVCETDFSGYPDCRDEFVKALNQAVALGLAKDIRFVTPLMWLNKAETWALAD 173

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                + V      + TCY G +      G GC  C AC+LR KG  E++  
Sbjct: 174 YYQQLETVK---NHTLTCYNGIK------GTGCGQCAACHLRAKGLAEYQRN 216


>gi|332160756|ref|YP_004297333.1| queuosine biosynthesis protein QueC [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318604637|emb|CBY26135.1| queuosine Biosynthesis QueC ATPase [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325664986|gb|ADZ41630.1| queuosine biosynthesis protein QueC [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330859941|emb|CBX70270.1| queuosine biosynthesis protein queC [Yersinia enterocolitica
           W22703]
          Length = 232

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 87/226 (38%), Positives = 130/226 (57%), Gaps = 17/226 (7%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  ++     K  
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRAEIDVARELAIQLGAKAHKVL 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQ--DNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +      +  L  L   S +     V    +  ++++P+TFVPGRNI+FL  AA  AY++
Sbjct: 62  E------VGMLNELAVSSLTRDNIPVPSYSEEGEDSIPSTFVPGRNILFLTLAAIYAYQV 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               ++ GVCETD+SGYPDCR + ++A+  AI+LG+   +   TPLMWL K ETW LA  
Sbjct: 116 QAQAVITGVCETDFSGYPDCRDEFVKALNHAIDLGIGRDIAFITPLMWLDKAETWALAD- 174

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
                 ++ I  ++ TCY G +      G GC  C AC+LR KG  
Sbjct: 175 --YYQQLDRIRHDTLTCYNGIQ------GDGCGKCAACHLRAKGLE 212


>gi|293392538|ref|ZP_06636858.1| transcription regulator ExsB [Serratia odorifera DSM 4582]
 gi|291424940|gb|EFE98149.1| transcription regulator ExsB [Serratia odorifera DSM 4582]
          Length = 232

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 86/231 (37%), Positives = 131/231 (56%), Gaps = 13/231 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +   +     K  D
Sbjct: 3   RAVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRAEIDVAQELSHSLGAKAHKILD 62

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +L    +  ++  ++         +  LP+TFVPGRNI+FL  AA  AY++   
Sbjct: 63  VG----LLNELAISSLTRDNIPVPAFGSETEGGLPSTFVPGRNILFLTLAAIYAYQVEAE 118

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++ GVCETD+SGYPDCR + ++A+  AI LG+   +   TPLMWL K ETW LA     
Sbjct: 119 AVITGVCETDFSGYPDCRDEFVKALNQAIVLGIARDIRFETPLMWLNKAETWALAD---Y 175

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
              ++ I +++ TCY G +      G GC  C AC+LR  G  +++ +  D
Sbjct: 176 YHQLDRIRQDTLTCYNGIK------GDGCGECAACHLRANGLTQYQSRQAD 220


>gi|77360059|ref|YP_339634.1| regulator protein [Pseudoalteromonas haloplanktis TAC125]
 gi|110816244|sp|Q3IKE8|QUEC_PSEHT RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|76874970|emb|CAI86191.1| putative regulator protein [Pseudoalteromonas haloplanktis TAC125]
          Length = 218

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 95/226 (42%), Gaps = 19/226 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++++SGG DS T L+ AL +   V  LSFDYGQR+  EL+    V K++      
Sbjct: 1   MTQKVVVIYSGGMDSFTVLNKALQQGHDVYALSFDYGQRHVKELKVAAQVCKQLNVPHKI 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              S     I      G  S +          +++++ +T VP RN+I L  A   A  L
Sbjct: 61  VDISAINQII------GGSSLTDDIDVPEGHYEEDSMKSTIVPNRNMILLSLAVGYAVSL 114

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
             + +  G    D++ YPDCR + ++ ++    +     V + +P +   K +       
Sbjct: 115 KASQVYYGAHSGDHAIYPDCRPEFVQKMDDVCRIANYDAVEIFSPYLNNTKIDILTDGIA 174

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
           +G      L   ++ TCY G+          C  C AC  R + + 
Sbjct: 175 MG------LDYSQTWTCYNGREK-------ACGKCGACQERLEAFE 207


>gi|326795519|ref|YP_004313339.1| exsB protein [Marinomonas mediterranea MMB-1]
 gi|326546283|gb|ADZ91503.1| exsB protein [Marinomonas mediterranea MMB-1]
          Length = 219

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 55/227 (24%), Positives = 90/227 (39%), Gaps = 19/227 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++++SGG DS T L+ A+     V  LSF+YGQR+  EL     V + +      
Sbjct: 1   MTNKAVVVYSGGMDSFTVLNKAIKDGKDVYALSFNYGQRHSKELIVAAKVCQDLNIPHKV 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              S   +      ++   S +   +       + ++ +T VP RN++ L  A   A  L
Sbjct: 61  VNISAINE------LMAGSSLTDEIEIPEGHYAEESMKSTVVPNRNMVLLSMAIAYAVSL 114

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G    D+  YPDCR   + A+     +     V + TP +   K +  +    
Sbjct: 115 EAPEVYYGAHSGDHHIYPDCRPAFVNAMNDVSKIANYQSVEIVTPYLSNSKGDILEDGLT 174

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
           +G      L    + TCY G+          C  C AC  R + + E
Sbjct: 175 MG------LNYANTWTCYNGREK-------ACGKCGACTERLEAFSE 208


>gi|153006757|ref|YP_001381082.1| exsB protein [Anaeromyxobacter sp. Fw109-5]
 gi|189038891|sp|A7HHA2|QUEC_ANADF RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|152030330|gb|ABS28098.1| exsB protein [Anaeromyxobacter sp. Fw109-5]
          Length = 233

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 70/240 (29%), Positives = 106/240 (44%), Gaps = 28/240 (11%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +    A++L SGG DS+TCL+ A         LS DYGQR+K EL     + + +     
Sbjct: 4   RPTKRAVVLLSGGLDSTTCLAVARRDGFEAHCLSVDYGQRHKGELARARRLSRALGAADH 63

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAM----KIQDNNLPNTFVPGRNIIFLVFAAT 121
           +          + L+  G  + +     V      + +   +P T+VP RN + L  A  
Sbjct: 64  RVVK-------VDLSAFGGSALTDRAIAVPKGRSGRRRAAEIPVTYVPARNTVLLALALA 116

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLK 176
            A  LG  ++ +GV   DYSGYPDCR   +RA E    +  ++ V      +H PL+ L 
Sbjct: 117 HAETLGAEDVYVGVNAIDYSGYPDCRPAFLRAFERLATVATKAGVEGRPLRIHAPLLRLT 176

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           K    +L   +G      +    + +CY   R      G  C +C AC LR+KG+ E   
Sbjct: 177 KAGIVRLGTSLG------VPYRVTLSCYDPVR------GRACGACDACVLRRKGFAEAGI 224


>gi|145588460|ref|YP_001155057.1| exsB protein [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
 gi|189038942|sp|A4SVH9|QUEC_POLSQ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|145046866|gb|ABP33493.1| preQ(0) biosynthesis protein QueC [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 246

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 74/243 (30%), Positives = 107/243 (44%), Gaps = 32/243 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           A++LFSGG DS+T L+ A D       LS  YGQR+  EL     + K+I     +  + 
Sbjct: 20  AVILFSGGLDSTTVLALAKDLGYTPYALSVGYGQRHSSELAAAKHIAKQIGVARHEVVN- 78

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKI-QDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 L L   G  + +  +  V     +D  +P T+VP RN I L  A   A  LG  
Sbjct: 79  ------LDLTRFGGSALTDSSIAVPTTPGKDQEIPVTYVPARNTILLSLALGWAESLGGL 132

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLG---------MESHVTVHTPLMWLKKYET 180
           ++  G    DYSGYPDCR + + + ET  NL           E+   VH P++ L K E 
Sbjct: 133 DVFYGANSVDYSGYPDCRPEYVASFETMANLATKAGVEAINNENRFRVHAPIISLTKAEI 192

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF----KE 236
            +L   +G      +   ++ +CY          G  C  C +C LRQ G+ +       
Sbjct: 193 IQLGSTLG------VDYSQTVSCYQAND-----LGEACGECESCRLRQIGFKQANVIDPT 241

Query: 237 KYQ 239
           +YQ
Sbjct: 242 RYQ 244


>gi|71065331|ref|YP_264058.1| ExsB family transcriptional regulator [Psychrobacter arcticus
           273-4]
 gi|71038316|gb|AAZ18624.1| probable ExsB protein [Psychrobacter arcticus 273-4]
          Length = 285

 Score =  161 bits (407), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 78/248 (31%), Positives = 114/248 (45%), Gaps = 24/248 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K+ +A++L SGG DS TCL WA  R+  V  +SFDYGQR+  EL     + +      
Sbjct: 48  LHKSQNAVVLLSGGLDSVTCLYWAKARYASVTAVSFDYGQRHNSELIAAKAIAETAGVNH 107

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP----NTFVPGRNIIFLVFAA 120
                 + +     L     I     T     K +D        NT+VP RN IFL +A 
Sbjct: 108 RIIDIDIAQLGGSSLTDHSMIVPDGDTDKFPDKKRDEIDNDAIPNTYVPARNTIFLSYAL 167

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWL 175
            +A      +IVIGV   DYSGYPDCR + I A +   NL  +      H+++ TPL  L
Sbjct: 168 AVAEVTDSNHIVIGVSSVDYSGYPDCRPEYIAAFQHMANLATKAGVTGHHLSIQTPLQQL 227

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K +T +L   +G      +   ++ +CY          G+ C  C +C LR++G+ +  
Sbjct: 228 SKAKTIELGLSLG------VDYGQTISCYQAD-----ANGFACGVCDSCALRRQGFAQAG 276

Query: 236 ----EKYQ 239
                 YQ
Sbjct: 277 VADPTHYQ 284


>gi|270263577|ref|ZP_06191846.1| queuosine biosynthesis protein QueC [Serratia odorifera 4Rx13]
 gi|270042461|gb|EFA15556.1| queuosine biosynthesis protein QueC [Serratia odorifera 4Rx13]
          Length = 232

 Score =  161 bits (407), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 86/229 (37%), Positives = 130/229 (56%), Gaps = 13/229 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E+E    +   +     K  
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRAEIEVAQALSVALGAKAHKVL 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D      +L    +  ++  S+        Q+  LP+TFVPGRNI+FL  AA  AY++  
Sbjct: 62  DVG----LLNELAISSLTRDSIPVPAYNNEQEGGLPSTFVPGRNILFLTLAAIYAYQVEA 117

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++ GVCETD+SGYPDCR + ++A+  A+ LG+   +   TPLMWL K ETW LA    
Sbjct: 118 EAVITGVCETDFSGYPDCRDEFVKALNHAVVLGIARDIRFETPLMWLNKAETWALAD--- 174

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
               ++ + +++ TCY G +      G GC  C AC+LR  G  +++  
Sbjct: 175 YYQQLDRVRQDTLTCYNGIQ------GDGCGECAACHLRANGLKQYQIN 217


>gi|261341045|ref|ZP_05968903.1| ExsB protein [Enterobacter cancerogenus ATCC 35316]
 gi|288316911|gb|EFC55849.1| ExsB protein [Enterobacter cancerogenus ATCC 35316]
          Length = 231

 Score =  161 bits (407), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 90/230 (39%), Positives = 132/230 (57%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +   +        
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALHQYDEVHCVTFDYGQRHRAEIDVARELALNLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       +   + +PNTFVPGRNI+FL   A  AY
Sbjct: 58  -----HKVLDVNLLNELAVSSLTRDSIPVPDYEPDASGIPNTFVPGRNILFLTLTAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A+NLGM       TPLMWL K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKETRFETPLMWLDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+  E+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYWG---KLDLVRSETLTCYNGIK------GDGCGQCAACNLRANGLNHY 213


>gi|197334729|ref|YP_002156396.1| ExsB protein [Vibrio fischeri MJ11]
 gi|254764390|sp|B5FF08|QUEC_VIBFM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|197316219|gb|ACH65666.1| ExsB protein [Vibrio fischeri MJ11]
          Length = 227

 Score =  161 bits (407), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 93/230 (40%), Positives = 135/230 (58%), Gaps = 15/230 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           +A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR+  E+E    V  ++     K  D
Sbjct: 3   TAIVVFSGGQDSTTCLIQALTQYDHVHCITFDYGQRHNQEIEVAKKVAIELGAASHKVMD 62

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  L  L   S +     V+ ++Q+N LPN+FVPGRNI+FL  A   AY+LG  
Sbjct: 63  ------VGLLNELAVSSLTRDNIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQLGAE 116

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++ GVCETD+SGYPDCR + +++I  ++ LGM+  + + TPLMWL K ETW LA   G 
Sbjct: 117 AVLTGVCETDFSGYPDCRDEFVKSINQSLVLGMDRQLEIKTPLMWLNKAETWALADKYG- 175

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
              ++ +   + TCY G        G GC  CP+C LR+ G   + E  +
Sbjct: 176 --KLDYVRNHTLTCYNG------VIGDGCGDCPSCDLRKNGLDAYLENKE 217


>gi|197124245|ref|YP_002136196.1| exsB protein [Anaeromyxobacter sp. K]
 gi|196174094|gb|ACG75067.1| exsB protein [Anaeromyxobacter sp. K]
          Length = 234

 Score =  161 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 70/246 (28%), Positives = 102/246 (41%), Gaps = 28/246 (11%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M     +A  A++L SGG DSSTCL+ A         LS DYGQR+K EL     + + +
Sbjct: 1   MAKATSEARRAVVLLSGGLDSSTCLAVARAEGLEAHCLSVDYGQRHKGELARARRIARAL 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT----FVPGRNIIFL 116
                +          + L+  G  + +     V     +  +       +VP RN + L
Sbjct: 61  GAAGHRVVK-------VDLSAFGGSALTDAAIAVPKGRSEARMARDIPVTYVPARNTVML 113

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTP 171
             A   A  +G   I +GV   DYSGYPDCR   +RA E    +   + V      +  P
Sbjct: 114 SLALAHAEVIGAEQIFVGVNAIDYSGYPDCRPAFLRAFERLAKVATRAGVEGRPLRIRAP 173

Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
           L+ L K    +L   +G      +    + +CY   R      G  C  C AC LR+KG+
Sbjct: 174 LLRLSKAGIVRLGTKLG------VPYRMTLSCYDPIR------GRACGRCDACRLRRKGF 221

Query: 232 MEFKEK 237
            E   +
Sbjct: 222 AEAGVQ 227


>gi|220919027|ref|YP_002494331.1| exsB protein [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219956881|gb|ACL67265.1| exsB protein [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 234

 Score =  161 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 70/246 (28%), Positives = 101/246 (41%), Gaps = 28/246 (11%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M     KA  A++L SGG DSSTCL+ A         LS DYGQR+K EL     + + +
Sbjct: 1   MAKATSKARRAVVLLSGGLDSSTCLAVARAEGLEAHCLSVDYGQRHKGELARARRIARAL 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT----FVPGRNIIFL 116
                +          + L+  G  + +     V     +  +       +VP RN + L
Sbjct: 61  GAAGHRVVK-------VDLSAFGGSALTDAAIAVPKGRSEARMARDIPVTYVPARNTVML 113

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTP 171
             A   A  +G   I +GV   DYSGYPDCR   +RA E    +   + V      +  P
Sbjct: 114 SLALAHAEVIGAEQIFVGVNAIDYSGYPDCRPAFLRAFERLAKVATRAGVEGRPLRIRAP 173

Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
           L+ L K    +L   +       +    + +CY   R      G  C  C AC LR+KG+
Sbjct: 174 LLRLSKAGIVRLGTKL------RVPYRLTLSCYDPIR------GRACGRCDACRLRRKGF 221

Query: 232 MEFKEK 237
            E   +
Sbjct: 222 AEAGVQ 227


>gi|238759255|ref|ZP_04620422.1| Queuosine biosynthesis protein queC [Yersinia aldovae ATCC 35236]
 gi|238702542|gb|EEP95092.1| Queuosine biosynthesis protein queC [Yersinia aldovae ATCC 35236]
          Length = 232

 Score =  161 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 87/234 (37%), Positives = 135/234 (57%), Gaps = 23/234 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  ++        
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRAEIDVARKLAIQLGAKA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVA-----MKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  +L + +L +++ SSLT++        +  ++++P+TFVPGRNI+FL   A  A
Sbjct: 58  -----HKVLDVGMLNELAVSSLTRDSIPVPTFDEEDEDSVPSTFVPGRNILFLTLTAIYA 112

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           Y++    ++ GVCETD+SGYPDCR   ++A+  AI+LG+   +   TPLMWL K ETW L
Sbjct: 113 YQVQAEAVITGVCETDFSGYPDCRDKFVKALNHAIDLGIGRDIAFITPLMWLDKAETWAL 172

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           A        ++L+   + TCY G +      G GC  C AC+LR KG   +   
Sbjct: 173 AD---YYQQLDLVRHHTLTCYNGIQ------GEGCGQCAACHLRAKGLSHYLAN 217


>gi|296284927|ref|ZP_06862925.1| exsB protein [Citromicrobium bathyomarinum JL354]
          Length = 231

 Score =  161 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 70/230 (30%), Positives = 102/230 (44%), Gaps = 24/230 (10%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           A  L SGG DS    + A +R   V  L+ DYGQR+  E+E    + K +     +    
Sbjct: 10  AAALLSGGLDSMVAAALARERGHEVHALTIDYGQRHVREIEAARKIAKALGLASHR---- 65

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
              +  L L   G  + ++   +V     D  +P T+VP RN++FL      A  +G   
Sbjct: 66  ---EITLDLRKFGGSALTAD-IDVPKDGVDGTIPVTYVPARNLVFLALTTAFAESIGAGR 121

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKLAQ 185
           IVIGV   DYSGYPDCR + I +      LG ++ +      +  PL +L K E    A 
Sbjct: 122 IVIGVNALDYSGYPDCRPEFIASFAETARLGTKAGIEGGGFAIDAPLQFLGKAEIASEAN 181

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            +G      L    S +CY  +       G  C  C +C LR+KG+ +  
Sbjct: 182 RLG------LDTALSWSCYDPR-----GDGLPCGLCDSCRLRRKGFADAG 220


>gi|307721058|ref|YP_003892198.1| preQ(0) biosynthesis protein QueC [Sulfurimonas autotrophica DSM
           16294]
 gi|306979151|gb|ADN09186.1| preQ(0) biosynthesis protein QueC [Sulfurimonas autotrophica DSM
           16294]
          Length = 227

 Score =  161 bits (406), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 72/241 (29%), Positives = 112/241 (46%), Gaps = 28/241 (11%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKK 59
           M    K    A+ + SGG DS+       +    +  + F+Y QR +  ELEC   +   
Sbjct: 1   MKKENKTNKKAVCIMSGGMDSTLSAYMMQNEGYEIIAVHFNYDQRTQTKELECFENICAS 60

Query: 60  IVELMPKWKDSLGEDHILPLAI---LGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
           +          + + +IL L     LG  + +  T  V  +  +  +P T+VP RN IFL
Sbjct: 61  L---------HVKQKYILDLDFFKQLGASALTDKTIEVPTQGIEEGVPVTYVPFRNGIFL 111

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMW 174
             AA +A +     I IGV E D SGYPDCR + I+A++ AINLG +   ++ +  PL+ 
Sbjct: 112 SMAAAIAEKESAQIISIGVVEEDSSGYPDCREEYIKAMQNAINLGTKEETNIEIKMPLVH 171

Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           LKK +  + A  +      N+ LE + +CY  ++         C  C +C LR  G+   
Sbjct: 172 LKKSQIVQEALKL------NVPLELTWSCYKNEKK-------ACGICDSCRLRLNGFETA 218

Query: 235 K 235
            
Sbjct: 219 G 219


>gi|294013048|ref|YP_003546508.1| probable transcription regulator ExsB [Sphingobium japonicum UT26S]
 gi|292676378|dbj|BAI97896.1| probable transcription regulator ExsB [Sphingobium japonicum UT26S]
          Length = 230

 Score =  161 bits (406), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 67/235 (28%), Positives = 98/235 (41%), Gaps = 24/235 (10%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                A++L SGG DS      A +   R+  LS DY QR+++EL+    V   +  +  
Sbjct: 4   HNGKFAVVLLSGGLDSMVAGGLAREAGYRLFALSIDYNQRHRLELQAAGRVAAALNAISH 63

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                      L L   G  + ++    V        +P T+VP RN IFL     LA  
Sbjct: 64  IVLP-------LDLTAFGGSALTAD-IAVPKGGVGAGIPITYVPARNTIFLSLTLGLAEV 115

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYET 180
            G  ++ IGV   DYSGYPDCR + I A +    L  +       + ++ PL  + K + 
Sbjct: 116 AGANDVFIGVNALDYSGYPDCRPEFIDAFQKMAALATKAGVEGHPIRINAPLQHMSKADI 175

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            + A  +G      L    S +CY          G  C  C +C LR KG++E  
Sbjct: 176 VREAYRLG------LDTGLSWSCYDP-----TPDGRHCGLCDSCRLRSKGFVEAG 219


>gi|110804472|ref|YP_687992.1| queuosine biosynthesis protein QueC [Shigella flexneri 5 str. 8401]
 gi|123048404|sp|Q0T7D9|QUEC_SHIF8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|110614020|gb|ABF02687.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
          Length = 231

 Score =  161 bits (406), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 89/230 (38%), Positives = 136/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQ+++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQQHRAEIDVARELALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       + + + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A++LGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+  E+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213


>gi|110816246|sp|Q4FTN4|QUEC_PSYA2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
          Length = 259

 Score =  161 bits (406), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 78/248 (31%), Positives = 114/248 (45%), Gaps = 24/248 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K+ +A++L SGG DS TCL WA  R+  V  +SFDYGQR+  EL     + +      
Sbjct: 22  LHKSQNAVVLLSGGLDSVTCLYWAKARYASVTAVSFDYGQRHNSELIAAKAIAETAGVNH 81

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP----NTFVPGRNIIFLVFAA 120
                 + +     L     I     T     K +D        NT+VP RN IFL +A 
Sbjct: 82  RIIDIDIAQLGGSSLTDHSMIVPDGDTDKFPDKKRDEIDNDAIPNTYVPARNTIFLSYAL 141

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWL 175
            +A      +IVIGV   DYSGYPDCR + I A +   NL  +      H+++ TPL  L
Sbjct: 142 AVAEVTDSNHIVIGVSSVDYSGYPDCRPEYIAAFQHMANLATKAGVTGHHLSIQTPLQQL 201

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K +T +L   +G      +   ++ +CY          G+ C  C +C LR++G+ +  
Sbjct: 202 SKAKTIELGLSLG------VDYGQTISCYQAD-----ANGFACGVCDSCALRRQGFAQAG 250

Query: 236 ----EKYQ 239
                 YQ
Sbjct: 251 VADPTHYQ 258


>gi|332534089|ref|ZP_08409938.1| queuosine biosynthesis QueC ATPase [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332036526|gb|EGI72994.1| queuosine biosynthesis QueC ATPase [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 218

 Score =  161 bits (406), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 19/226 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++++SGG DS T L+ AL +   V  LSFDYGQR+  EL+    V +K+      
Sbjct: 1   MTQKVVVIYSGGMDSFTVLNKALQQGHDVYALSFDYGQRHVKELKVAASVCEKLNVPHKI 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              S     I      G  S +          ++ ++ +T VP RN+I L  A   A  L
Sbjct: 61  VDISAINQLI------GGSSLTDDIDVPEGHYEEESMKSTIVPNRNMILLSLAVGYAVSL 114

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
             + +  G    D++ YPDCR + ++ ++    +     V + +P +   K        +
Sbjct: 115 KASQVYYGAHSGDHAIYPDCRPEFVQKMDDVCRIANYDAVEIFSPYLNNTKIGILTDGIE 174

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
           +G      L   ++ TCY G+          C  C AC  R + + 
Sbjct: 175 MG------LDYSQTWTCYNGREK-------ACGKCGACQERLEAFA 207


>gi|261867499|ref|YP_003255421.1| ExsB protein [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|261412831|gb|ACX82202.1| ExsB protein [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 234

 Score =  161 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 91/234 (38%), Positives = 132/234 (56%), Gaps = 23/234 (9%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIV 61
           +  +   AL++FSGGQDS+TCL  A+  F  + VE ++F YGQR+ +ELE    + + + 
Sbjct: 1   MSNQPNKALVIFSGGQDSTTCLFLAMQEFGAENVEVITFQYGQRHVIELEKARWIAQDLK 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                      +  +L  +++  I+H++L   N  +  +DN LPNTFV GRN +FL++AA
Sbjct: 61  ----------VKQTVLDTSVIKAITHNALMDPNAPISQKDNELPNTFVDGRNALFLLYAA 110

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
             A   GI  I  GVCETD+SGYPDCR   ++++   +NL M     + TPLMWL K ET
Sbjct: 111 IYAKSQGIRVIYTGVCETDFSGYPDCRDVFVKSMNVTLNLAMAYPFEIRTPLMWLDKKET 170

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           W LA  +G     + I   +HTCY G          GC  CP+C LR++G   +
Sbjct: 171 WALADQLGAF---DYIRRHTHTCYNGVEG-------GCGECPSCVLRERGLKAY 214


>gi|157738264|ref|YP_001490948.1| ExsB family transcriptional regulator [Arcobacter butzleri RM4018]
 gi|189038892|sp|A8EWF5|QUEC_ARCB4 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|157700118|gb|ABV68278.1| transcriptional regulator, ExsB family [Arcobacter butzleri RM4018]
          Length = 228

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 24/240 (10%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR-LCVRKK 59
           MN I      A+ + SGG DS+     A      +  + F+YGQR +         +  +
Sbjct: 1   MNKI--STKKAICILSGGMDSTLSSYIAKKDGFEIIAVHFNYGQRTQNRELKAFRDICNE 58

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +            E  I     +G  + + ++ +V     +  +P T+VP RN IFL   
Sbjct: 59  LDIKSKY------EIDIPFFTQIGANALTDMSIDVPTGGLEAGVPITYVPFRNGIFLAIT 112

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKK 177
           A +A + G T + IGV + D SGYPDC  + I+ ++ AIN G   ++ + + TPL+ L K
Sbjct: 113 AAIAEKEGATAMYIGVVQEDSSGYPDCTEEFIQDMKKAINQGTKEDTKIEIITPLVHLSK 172

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            +  + A  +      N+ LE + +CY  + +        C  C +C LR  G+ +  +K
Sbjct: 173 AQIVQEAIKL------NVPLELTWSCYKEEEE-------ACGVCDSCRLRLNGFEQAGKK 219


>gi|170076909|ref|YP_001733547.1| exsB protein [Synechococcus sp. PCC 7002]
 gi|169884578|gb|ACA98291.1| exsB protein [Synechococcus sp. PCC 7002]
          Length = 225

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 61/233 (26%), Positives = 104/233 (44%), Gaps = 26/233 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+T  + A+     V  LSF YGQ++  EL     + + +        
Sbjct: 2   KRAVVLLSGGLDSATSAAQAIADGYEVFALSFRYGQKHSRELVAAQKIAEHLGITEHFIM 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           D       + L+  G  S + + + +    +Q  ++P+T+VPGRN +FL  A +LA    
Sbjct: 62  D-------VNLSQWGGSSLTDVNQAIPQSGVQTGDIPSTYVPGRNTVFLAIALSLAEAKQ 114

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL-----KKYETWK 182
              I +G+   DYSGYPDCR + + A +   +L  +  +  H P +        K E  +
Sbjct: 115 AEAIYLGINAVDYSGYPDCRPEYLAAYQKLADLSSKVGIEGHAPQLVAPLVLDTKVEIIQ 174

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            A  +G      + +  + +CY G           C  C +C +R +  ++  
Sbjct: 175 KAVKLG------VPIAATWSCYQGGEHP-------CGLCDSCRIRDEALIKAG 214


>gi|224824583|ref|ZP_03697690.1| exsB protein [Lutiella nitroferrum 2002]
 gi|224603076|gb|EEG09252.1| exsB protein [Lutiella nitroferrum 2002]
          Length = 230

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 100/239 (41%), Positives = 138/239 (57%), Gaps = 29/239 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +  +  AL++ SGGQDS+TCL WAL RF  D VE ++FDYGQR++VEL+    +      
Sbjct: 1   MNSSDKALVVLSGGQDSTTCLYWALQRFGADNVEAVTFDYGQRHRVELDSARTIA----- 55

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNV------AMKIQDNNLPNTFVPGRNIIFL 116
                  +     +LP+     I  ++LT         A    D  LPNTFVPGRN+IFL
Sbjct: 56  -----ALAGVPHTVLPIDTFAAIGGNALTDASITPESGARADDDTALPNTFVPGRNLIFL 110

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
            FAA   Y  G  ++V GV +TDYSGYPDCR +T++A+E A+ LG+++ V +HTPLM+L 
Sbjct: 111 NFAAAFGYTRGARHLVTGVAQTDYSGYPDCRENTLKALELALRLGLDARVELHTPLMYLS 170

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           K +T +LAQ +G  + +      SHTCY G++         C  C AC LR KG+ E  
Sbjct: 171 KADTVRLAQQVGAMEAMAF----SHTCYNGEQPP-------CGHCAACELRAKGFAEAG 218


>gi|152992854|ref|YP_001358575.1| ExsB family transcriptional regulator [Sulfurovum sp. NBC37-1]
 gi|167016454|sp|A6Q9Q9|QUEC_SULNB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|151424715|dbj|BAF72218.1| transcriptional regulator, ExsB family [Sulfurovum sp. NBC37-1]
          Length = 222

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 69/237 (29%), Positives = 113/237 (47%), Gaps = 28/237 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMP 65
               A+ + SGG DS+     A +    +  L F+YGQR +  ELEC   + +++     
Sbjct: 1   MGKKAVCIISGGMDSALSAKIAQEEGYEIIALHFNYGQRTRNKELECFRKITQELNA--- 57

Query: 66  KWKDSLGEDHILPLAIL---GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                  E + + L      G  + +  + +V +   +  +P T+VP RN IFL  AA +
Sbjct: 58  ------SESYEIDLDFFEQIGASALTDKSIDVPIGGLEEGVPVTYVPFRNGIFLSIAAAI 111

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYET 180
           A + G   + IGV E D SGYPDCR   I  ++ AINLG +   ++ +  PL+ L+K + 
Sbjct: 112 AEKHGAEALFIGVVEEDSSGYPDCRESYIEQMQKAINLGTKDETNIEIKMPLVSLRKSQI 171

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            + A ++G      + LE++ +CY  +          C  C +C LR +G+     K
Sbjct: 172 VQKAIELG------VPLEDTWSCYQAEDA-------ACGVCDSCRLRLRGFEVAGVK 215


>gi|315636553|ref|ZP_07891789.1| transcription regulator ExsB [Arcobacter butzleri JV22]
 gi|315479202|gb|EFU69899.1| transcription regulator ExsB [Arcobacter butzleri JV22]
          Length = 228

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 24/240 (10%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR-LCVRKK 59
           MN I      A+ + SGG DS+     A      +  + F+YGQR +         +  +
Sbjct: 1   MNKI--STKKAICILSGGMDSTLSSYIAKKDGFEIIAVHFNYGQRTQNRELKAFKDICNE 58

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +            E  I     +G  + + ++ +V     +  +P T+VP RN IFL   
Sbjct: 59  LDIKSKY------EIDIPFFTQIGANALTDMSIDVPTSGLEAGVPITYVPFRNGIFLAIT 112

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKK 177
           A +A + G T + IGV + D SGYPDC  + I+ ++ AIN G   ++ + + TPL+ L K
Sbjct: 113 AAIAEKEGATAMYIGVVQEDSSGYPDCTEEFIQDMKKAINQGTKEDTKIEIITPLVHLSK 172

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            +  + A  +      N+ LE + +CY  + +        C  C +C LR  G+ +  +K
Sbjct: 173 AQIVQEAIKL------NVPLELTWSCYKEEEE-------ACGVCDSCRLRLNGFEQAGKK 219


>gi|226354846|ref|YP_002784586.1| Queuosine biosynthesis protein [Deinococcus deserti VCD115]
 gi|226316836|gb|ACO44832.1| putative Queuosine biosynthesis protein [Deinococcus deserti
           VCD115]
          Length = 237

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 66/239 (27%), Positives = 106/239 (44%), Gaps = 28/239 (11%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +  +   A++L SGG DSST L  A  R       LSF YGQR+ VEL+    + +    
Sbjct: 1   MTTQQKRAVVLLSGGLDSSTVLGIATRRDGYTCAALSFRYGQRHTVELDRAAQIARHFGA 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN-LPNTFVPGRNIIFLVFAAT 121
                         + L   G  + +  T  V     D+  +P T+VPGRN +F+    +
Sbjct: 61  EHRIID--------INLGSFGGSALTDETITVPTDGADDGVIPPTYVPGRNTVFIAIGLS 112

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH-----TPLMWLK 176
           LA  +G   I +G+   DYSGYPDCR + + A +   NL  ++ +  H      PL+ + 
Sbjct: 113 LAEAIGAERIYLGINAVDYSGYPDCRPEYLEAYQHLANLATKAGLEGHGAALVAPLLHMT 172

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           K +    A ++G      + ++ + +CY G  +        C  C +C +R +   E  
Sbjct: 173 KVDIVNAALELG------VPVDVTWSCYQGGTEP-------CGVCDSCRIRDRALTEAG 218


>gi|93005607|ref|YP_580044.1| ExsB [Psychrobacter cryohalolentis K5]
 gi|110816247|sp|Q1QCP3|QUEC_PSYCK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|92393285|gb|ABE74560.1| ExsB [Psychrobacter cryohalolentis K5]
          Length = 259

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 78/248 (31%), Positives = 113/248 (45%), Gaps = 24/248 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K+ +A++L SGG DS TCL WA  R+  V  +SFDYGQR+  EL     + +      
Sbjct: 22  LHKSQNAVVLLSGGLDSVTCLYWAKARYASVTAVSFDYGQRHNSELVAAKAIAETAGVNH 81

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP----NTFVPGRNIIFLVFAA 120
                 + +     L     I     T     K +D        NT+VP RN IFL +A 
Sbjct: 82  RIIDIDIAQLGGSSLTDHSMIVPDGDTDKFPDKKRDEIDNDAIPNTYVPARNTIFLSYAL 141

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWL 175
            +A      +IVIGV   DYSGYPDCR + I A +   NL  +      H+++ TPL  L
Sbjct: 142 AVAEVTDSNHIVIGVSSVDYSGYPDCRPEYIAAFQHMANLATKAGVTGHHLSIQTPLQQL 201

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K +T +L   +G      +   ++ +CY          G  C  C +C LR++G+ +  
Sbjct: 202 SKAKTIELGLSLG------VDYGQTISCYQAD-----ANGLACGVCDSCALRRQGFAQAG 250

Query: 236 ----EKYQ 239
                 YQ
Sbjct: 251 VADPTHYQ 258


>gi|218549888|ref|YP_002383679.1| queuosine biosynthesis protein QueC [Escherichia fergusonii ATCC
           35469]
 gi|254764346|sp|B7LMD5|QUEC_ESCF3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|218357429|emb|CAQ90068.1| queuosine biosynthesis protein [Escherichia fergusonii ATCC 35469]
 gi|323976071|gb|EGB71164.1| exsB protein [Escherichia coli TW10509]
 gi|325498265|gb|EGC96124.1| queuosine biosynthesis protein QueC [Escherichia fergusonii ECD227]
          Length = 231

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 90/230 (39%), Positives = 136/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       + + + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A++LGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+  E+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRSNGLHHY 213


>gi|238751013|ref|ZP_04612509.1| Queuosine biosynthesis protein queC [Yersinia rohdei ATCC 43380]
 gi|238710703|gb|EEQ02925.1| Queuosine biosynthesis protein queC [Yersinia rohdei ATCC 43380]
          Length = 232

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 89/228 (39%), Positives = 134/228 (58%), Gaps = 23/228 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR+  E+E    +  ++        
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHSAEIEVARQLATQLGVKA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVA-----MKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  +L + +L +++ SSLT++        +  +N +PNTFVPGRNI+FL  +A  A
Sbjct: 58  -----HKVLDVGMLNELAVSSLTRDSIPVPSYHEDDENAVPNTFVPGRNILFLTLSAIYA 112

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           Y++    ++ GVCETD+SGYPDCR + ++A+  AI+LG+   +   TPLMWL K ETW L
Sbjct: 113 YQVQAQAVITGVCETDFSGYPDCRDEFVKALNHAIDLGIGRDIAFITPLMWLDKAETWAL 172

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
           A        ++ +  ++ TCY G +      G GC  C AC+LR KG 
Sbjct: 173 AD---YYQQLDRVRHDTLTCYNGIQ------GDGCGQCAACHLRAKGL 211


>gi|85711960|ref|ZP_01043014.1| Predicted PP-loop superfamily ATPase [Idiomarina baltica OS145]
 gi|85694146|gb|EAQ32090.1| Predicted PP-loop superfamily ATPase [Idiomarina baltica OS145]
          Length = 219

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 95/229 (41%), Gaps = 19/229 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +   ++++SGG DS T L+ AL++   V  LSF+YGQR+  EL+    V + +      
Sbjct: 1   MSQKVVVIYSGGMDSFTVLNRALEQGHEVSALSFNYGQRHVRELDVAAKVCEALNIPHKI 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +          +L   S +   +      +++++ +T VP RN+I L  A   A   
Sbjct: 61  VDITAIN------TLLAGSSLTDDIEIPEGHYEESSMKSTVVPNRNMILLSLAIGYAVSE 114

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G + +  G    D++ YPDCR + +R +     L     V V  P + + K         
Sbjct: 115 GASAVYYGAHSGDHAIYPDCRPEFVRQMNVVSQLANYEPVEVVAPYLDVDKNAILADGLR 174

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           +      +L   ++ TCY G+          C  C AC  R + +    
Sbjct: 175 M------DLNYADTWTCYNGRDK-------ACGKCGACVERLEAFAANG 210


>gi|30248246|ref|NP_840316.1| ExsB protein [Nitrosomonas europaea ATCC 19718]
 gi|81584822|sp|Q82XN5|QUEC_NITEU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|30180131|emb|CAD84133.1| ExsB protein [Nitrosomonas europaea ATCC 19718]
          Length = 228

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 74/231 (32%), Positives = 105/231 (45%), Gaps = 23/231 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+T L+ A         LS DYGQR+  EL     + + +     ++ 
Sbjct: 2   KKAVVLLSGGMDSATTLAIARQSGFACYALSIDYGQRHVAELAAAARIGQSLQVSDHQFL 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L LA+L     + ++  V +      +P T+VP RN I L  A   A  LG 
Sbjct: 62  K-------LDLAVLASSVLTDISATVPLHGTSTGIPVTYVPARNTIMLALALAWAEVLGS 114

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKL 183
            +I IGV   DYSGYPDCR D I A E   NL  +       +TVH PL+ L K E  + 
Sbjct: 115 HDIFIGVTAVDYSGYPDCRRDYIDAFEKMANLATKAGREGMVLTVHAPLIDLPKREIIQC 174

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
             ++G      +    + +CY          GY C  C AC++R+ G+   
Sbjct: 175 GMELG------IDYGLTVSCYQADEA-----GYACGQCDACHIRRAGFEAA 214


>gi|226228043|ref|YP_002762149.1| queuosine biosynthesis protein QueC [Gemmatimonas aurantiaca T-27]
 gi|226091234|dbj|BAH39679.1| queuosine biosynthesis protein QueC [Gemmatimonas aurantiaca T-27]
          Length = 238

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 74/238 (31%), Positives = 102/238 (42%), Gaps = 33/238 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           A++L SGG DS+T L+ A         ++F YGQR+  E+E                   
Sbjct: 14  AVVLLSGGLDSATALAVARRDGFTPYAMTFRYGQRHAGEIE----------AARRVAAAQ 63

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQD------NNLPNTFVPGRNIIFLVFAATLAY 124
               H++    L     S+LT +V +          + +P T+VP RN IFL FA   A 
Sbjct: 64  QAARHVVVDIDLRQWGGSALTSDVEVPKDRDVDEVTDEIPVTYVPARNTIFLSFALAWAE 123

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPLMWLKKY 178
            LG   I IGV   DYSGYPDCR + + A ET  NL   + V       +H PL  L K 
Sbjct: 124 TLGADAIFIGVNALDYSGYPDCRPEYVAAFETMANLATRAGVEGTQRLTIHAPLQHLTKA 183

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           +   L + +G      +    + +CY          G  C  C AC LR +G+ E   
Sbjct: 184 QIVTLGRSLG------VDYSLTTSCYDP-----APDGTACGHCDACQLRLRGFAEAGA 230


>gi|332970921|gb|EGK09897.1| transcription regulator ExsB [Psychrobacter sp. 1501(2011)]
          Length = 268

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 78/248 (31%), Positives = 112/248 (45%), Gaps = 39/248 (15%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           A++L SGG DS TCL WA  R+ +V  +SF+YGQR+  EL     + K+           
Sbjct: 37  AVVLLSGGLDSVTCLYWAKSRYSKVTAVSFNYGQRHNSELVAAKTIAKQAGVDHKIID-- 94

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNL-----------PNTFVPGRNIIFLVFA 119
                 + +A LG  S +     V     D              PNT+VP RN IFL +A
Sbjct: 95  ------IDIAQLGGSSLTDHDMTVPDGDADKFPTHTDTIDNDAIPNTYVPARNTIFLSYA 148

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW----- 174
             +A      +IVIGV   DYSGYPDCR + I A E   NL  ++ VT H   +      
Sbjct: 149 LAVAEVTDANHIVIGVSSVDYSGYPDCRPEYIEAFEVMANLATKAGVTGHKLHIQTPLQK 208

Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           L K +T +L   +G      +   ++ +CY    +     G  C  C +C LR++G+ + 
Sbjct: 209 LSKAQTIQLGNSLG------VDYSQTISCYKADAE-----GRACGICDSCTLRKRGFSDA 257

Query: 235 K----EKY 238
                 +Y
Sbjct: 258 GLADPTRY 265


>gi|260436436|ref|ZP_05790406.1| ExsB protein [Synechococcus sp. WH 8109]
 gi|260414310|gb|EEX07606.1| ExsB protein [Synechococcus sp. WH 8109]
          Length = 226

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 67/238 (28%), Positives = 113/238 (47%), Gaps = 27/238 (11%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + +  +A+ L SGG DS+T  + AL++ DRV  LSFDYGQR++ EL+    + +++    
Sbjct: 1   MSQR-TAIALLSGGLDSATAAALALEQGDRVIGLSFDYGQRHRRELDAAAAIAEQLGLAE 59

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLA 123
                       + LA  G  + +  + ++    +++ ++P T+VPGRN +F+    +LA
Sbjct: 60  HHC-------ISVNLASWGGSALTDASISIPTHGVEEGSIPPTYVPGRNTVFISVGLSLA 112

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW-----LKKY 178
              G   +V+GV   DYSGYPDCR D + A +T  +L  ++    H   +W       K 
Sbjct: 113 EARGAERLVLGVNAVDYSGYPDCRPDYLNAFQTLADLASKAGREDHGAQLWAPLVQWSKV 172

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
              + A  +G      + +E + +CY G           C  C +C +R     E   
Sbjct: 173 RIVEEALRLG------VPIETTWSCYSGGTHP-------CGVCDSCRIRDAALREAGR 217


>gi|238783602|ref|ZP_04627623.1| Queuosine biosynthesis protein queC [Yersinia bercovieri ATCC
           43970]
 gi|238715480|gb|EEQ07471.1| Queuosine biosynthesis protein queC [Yersinia bercovieri ATCC
           43970]
          Length = 232

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 87/225 (38%), Positives = 129/225 (57%), Gaps = 17/225 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  ++     K  D
Sbjct: 3   RAVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRAEIDVARELATQLGAKAHKVLD 62

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL--PNTFVPGRNIIFLVFAATLAYRLG 127
                 +  L  L   S +  +  V    +++    P+TFVPGRNI+FL  AA  AY++ 
Sbjct: 63  ------VGMLNELAVSSLTRDSIPVPTYNEEDTDAVPSTFVPGRNILFLTLAAIYAYQVQ 116

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ GVCETD+SGYPDCR + ++A+  AI+LG+   +   TPLMWL K ETW LA   
Sbjct: 117 AQAVITGVCETDFSGYPDCRDEFVKALNHAIDLGIGRDIAFITPLMWLDKAETWALAD-- 174

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
                ++ +  ++ TCY G +      G GC  C AC+LR KG  
Sbjct: 175 -YYQQLDRVRNDTLTCYNGIQ------GDGCGECAACHLRAKGLA 212


>gi|284104500|ref|ZP_06386146.1| Exoenzyme S synthesis protein B/queuosine synthesis [Candidatus
           Poribacteria sp. WGA-A3]
 gi|283830200|gb|EFC34454.1| Exoenzyme S synthesis protein B/queuosine synthesis [Candidatus
           Poribacteria sp. WGA-A3]
          Length = 232

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 64/236 (27%), Positives = 104/236 (44%), Gaps = 26/236 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+ L SGG DS+   + A      +  L+  YGQR+  E++    +   +     K   
Sbjct: 3   KAVALASGGLDSTVTAAMARHDGYALYLLTIRYGQRHHAEIQKAREIAAWLGAAEHKILQ 62

Query: 70  SLGEDHILPLAILGDISHS---SLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                  L L   G  +      + KN + + ++  +P+T+VP RN IFL  A   A  +
Sbjct: 63  -------LDLHEFGGSALVGAGDVPKNRSDRERETGIPSTYVPARNTIFLSLALAYAEVV 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETW 181
             + I IG    DYSGYPDCR + + A E    LG +       V +  PL+ L K +  
Sbjct: 116 DASCIFIGANVLDYSGYPDCRPEFLHAFERVARLGTKKGTDGQTVQIKAPLLLLSKTQII 175

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +  + +G      +  E +H+CY  + D     G  C  C +C +R +G+ +   +
Sbjct: 176 QQGRVLG------VPFELTHSCYDPRED-----GAACGRCDSCMIRLQGFRDAGLQ 220


>gi|197284034|ref|YP_002149906.1| queuosine biosynthesis protein QueC [Proteus mirabilis HI4320]
 gi|227358095|ref|ZP_03842437.1| transcriptional regulator [Proteus mirabilis ATCC 29906]
 gi|254764367|sp|B4EU60|QUEC_PROMH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|194681521|emb|CAR40410.1| conserved hypothetical protein [Proteus mirabilis HI4320]
 gi|227161830|gb|EEI46862.1| transcriptional regulator [Proteus mirabilis ATCC 29906]
          Length = 232

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 88/228 (38%), Positives = 140/228 (61%), Gaps = 23/228 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              +++FSGGQDS+TCL  AL+++D V  ++F+YGQR+K E+E    V + +        
Sbjct: 2   KKTVVVFSGGQDSTTCLIQALEQYDEVHCITFNYGQRHKEEIEVAQRVSQLLGATA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVA-----MKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  +L +++L +++ SSLT++        + + +++P+TFVPGRNI+FL  AA  A
Sbjct: 58  -----HKVLDVSLLNELAISSLTRDNIPVPDFKQSEQSDIPSTFVPGRNILFLTLAAIYA 112

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           Y++G  +++ GVCETD+SGYPDCR + ++A+  A+NLG+   +   TPLMWL K +TW L
Sbjct: 113 YQIGAESVITGVCETDFSGYPDCRDEFVKALNHAVNLGIARDIQFITPLMWLDKAQTWAL 172

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
           A   G    ++ +   + TCY G +      G GC  C AC+LR++G 
Sbjct: 173 ADYYG---KLDFVRHNTLTCYNGIQ------GDGCGQCAACHLRERGL 211


>gi|251792043|ref|YP_003006763.1| ExsB protein [Aggregatibacter aphrophilus NJ8700]
 gi|247533430|gb|ACS96676.1| ExsB protein [Aggregatibacter aphrophilus NJ8700]
          Length = 223

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 89/234 (38%), Positives = 134/234 (57%), Gaps = 23/234 (9%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIV 61
           +  +   AL++FSGGQDS+TCL  A+  F  + VE ++F YGQR+ +ELE    + + + 
Sbjct: 1   MSNQPNKALVIFSGGQDSTTCLFLAIKEFGPENVEVITFQYGQRHVIELEKARWIAQDLK 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                      +  +L  +++  I+H++L   N  +  +D+ LPNTFV GRN +FL++AA
Sbjct: 61  ----------VKQTLLDTSVIKAITHNALMDPNAQISQKDDELPNTFVDGRNALFLLYAA 110

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
             A   GI  I  GVCETD+SGYPDCR   ++++   +NL M+    + TPLMWL K +T
Sbjct: 111 IYAKSQGIRVIYTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYPFDIRTPLMWLDKKDT 170

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           W LA  +G     + I + +HTCY G          GC  CP+C LR++G   +
Sbjct: 171 WALADQLGAF---DYIRQHTHTCYNGVEG-------GCGECPSCILRERGLNAY 214


>gi|302870892|ref|YP_003839528.1| exsB protein [Caldicellulosiruptor obsidiansis OB47]
 gi|302573751|gb|ADL41542.1| exsB protein [Caldicellulosiruptor obsidiansis OB47]
          Length = 217

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 97/229 (42%), Gaps = 27/229 (11%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           ++ SGG DS+T L    ++   V  +SF YGQ++  ELE        +          L 
Sbjct: 1   MVLSGGMDSTTLLYDVKNQGYEVFAISFLYGQKHSKELEFAKKTCSLL----------LV 50

Query: 73  EDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              I+ ++   +++ S+LT            D+ +  T VP RN++ L  +A  A  LG 
Sbjct: 51  PHKIVDISFFAELAPSALTMPDWNVPEGYYTDSTMKQTVVPNRNMVLLSISAAYAISLGA 110

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G    D+  YPDCR + + A++ A+ L     + +  P + +KK +  K   ++G
Sbjct: 111 KKLFYGAHAGDHPIYPDCRKEFVEAMKKALYLADYIGLELEAPYVDMKKEDILKRGLELG 170

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                 +    + +CY G +         C  C  C  R + + +   K
Sbjct: 171 ------VDYSLTWSCYKGGQK-------ACGRCGTCTERIEAFKKAGVK 206


>gi|308050952|ref|YP_003914518.1| preQ(0) biosynthesis protein QueC [Ferrimonas balearica DSM 9799]
 gi|307633142|gb|ADN77444.1| preQ(0) biosynthesis protein QueC [Ferrimonas balearica DSM 9799]
          Length = 220

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 53/226 (23%), Positives = 93/226 (41%), Gaps = 17/226 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++++SGG DS T L   +        ++FDYGQR+  E+E    V  ++      
Sbjct: 1   MEKKAVVIYSGGMDSFTVLHKVITEGYTPYAITFDYGQRHDKEVEYAKVVCSELGINHKI 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +        L     ++  S +        ++N+ +T VP RN+I +  A   A  +
Sbjct: 61  IDITAINQ----LISGSSLTRDSESDIPEGHYAEDNMKSTVVPNRNMILISLATGYAASI 116

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   +  G    D++ YPDCR + +  I  A  +     + V +P ++  K E  K   +
Sbjct: 117 GAGKVFYGAHSGDHAIYPDCRPEFVEKINAATMIANYEPIEVVSPYLYQSKIEILKDGLE 176

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
           +G      L   ++ TCY G+          C  C +C  R + + 
Sbjct: 177 MG------LDYGKTWTCYNGREK-------ACGRCGSCVERLESFE 209


>gi|59712187|ref|YP_204963.1| queuosine biosynthesis protein QueC [Vibrio fischeri ES114]
 gi|75353773|sp|Q5E4H1|QUEC_VIBF1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|59480288|gb|AAW86075.1| queuosine biosynthesis protein QueC [Vibrio fischeri ES114]
          Length = 227

 Score =  160 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 93/230 (40%), Positives = 135/230 (58%), Gaps = 15/230 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           +A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR+  E+E    V  ++     K  D
Sbjct: 3   TAIVVFSGGQDSTTCLIQALTQYDHVHCITFDYGQRHNQEIEVAKKVSIELGAASHKVMD 62

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  L  L   S +     V+ ++Q+N LPN+FVPGRNI+FL  A   AY+LG  
Sbjct: 63  ------VGLLNELAVSSLTRDNIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQLGAE 116

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++ GVCETD+SGYPDCR + +++I  ++ LGM+  + + TPLMWL K ETW LA   G 
Sbjct: 117 AVITGVCETDFSGYPDCRDEFVKSINQSLVLGMDRQLEIKTPLMWLNKAETWALADKYG- 175

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
              ++ +   + TCY G        G GC  CP+C LR+ G   + E  +
Sbjct: 176 --KLDYVRNHTLTCYNG------VIGDGCGDCPSCDLRKNGLDAYLENKE 217


>gi|120553049|ref|YP_957400.1| exsB protein [Marinobacter aquaeolei VT8]
 gi|189038922|sp|A1TWU4|QUEC_MARAV RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|120322898|gb|ABM17213.1| preQ(0) biosynthesis protein QueC [Marinobacter aquaeolei VT8]
          Length = 221

 Score =  160 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 53/233 (22%), Positives = 93/233 (39%), Gaps = 27/233 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              S ++++SGG DS T L  A  R  +V  LSF+YGQR+  EL+    V +        
Sbjct: 1   MTDSVVVIYSGGMDSFTLLHLARARGLKVHALSFNYGQRHVRELDVAADVCRAEG----- 55

Query: 67  WKDSLGEDHILPLAILGDIS----HSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                    ++ +  + ++      +S  +      +++ +  T VP RN+I L  A   
Sbjct: 56  -----IPHKVIDIRAMSEVMSGSSLTSDIEVPEGHYEEDTMKATVVPNRNMILLSLATGY 110

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A   G   +  G    D++ YPDCR + +  ++    +     V +  P M + K +   
Sbjct: 111 AVTTGAGAVWYGAHGGDHAIYPDCRPEFVEKMDAVCRVANYEPVGIEAPFMAMDKGQILA 170

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
               +G      L   ++ TCY G+          C  C +C  R + +    
Sbjct: 171 EGLKLG------LDYSQTWTCYNGRDK-------ACGRCGSCVERLEAFAANG 210


>gi|257453857|ref|ZP_05619135.1| ExsB protein [Enhydrobacter aerosaccus SK60]
 gi|257448784|gb|EEV23749.1| ExsB protein [Enhydrobacter aerosaccus SK60]
          Length = 236

 Score =  160 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 76/232 (32%), Positives = 110/232 (47%), Gaps = 16/232 (6%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           + +A++L SGG DS TCL WA   +  V  +SF+YGQR+  EL     +           
Sbjct: 7   SQNAVVLLSGGLDSVTCLYWAKANYTNVTAVSFNYGQRHNSELNAAKKIAATAQVNHRII 66

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              L +     L     +   +   + +    ++++P T+VP RN IFL +A  LA    
Sbjct: 67  DIDLAQLGGSALTDASLVVPDAKQTDFSDNQHNDSIPITYVPARNTIFLSYALALAEVTQ 126

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG-----MESHVTVHTPLMWLKKYETWK 182
              IVIGV   DYSGYPDCR + I A E   NL      M +H+ + TPL+ L K E  K
Sbjct: 127 SNTIVIGVNAVDYSGYPDCRPEYIEAFEKMANLATKAGVMGNHLHIATPLLHLSKAEIIK 186

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           L   +G      +    + +CY          G  C  C +CYLRQ+G+++ 
Sbjct: 187 LGVSLG------VDYALTVSCYRAD-----SEGRACAHCDSCYLRQQGFLQA 227


>gi|148244668|ref|YP_001219362.1| trans-regulatory protein ExsB [Candidatus Vesicomyosocius okutanii
           HA]
 gi|189029333|sp|A5CWP9|QUEC_VESOH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|146326495|dbj|BAF61638.1| trans-regulatory protein ExsB [Candidatus Vesicomyosocius okutanii
           HA]
          Length = 230

 Score =  160 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 76/239 (31%), Positives = 113/239 (47%), Gaps = 27/239 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DS+T L+ A  +     +LSFDYGQ+ + EL+    + K  +    +   
Sbjct: 9   KAVILLSGGLDSTTTLAIAKSKKFECYSLSFDYGQKQESELQSAKNIAKIFITSEHRVVK 68

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                  + L+ +   + ++   +V    Q N +P T+VP RN IFL +A   +  L   
Sbjct: 69  -------ISLSGISKSALTNDNIDVPKFSQSNKIPITYVPARNTIFLSYALAWSEVLNCQ 121

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKLA 184
           +I IGV E DYSGYPDCR   I+A E   NL  +  +      +HTPL+ L K +  K  
Sbjct: 122 HIFIGVNELDYSGYPDCRKSYIKAFEIMANLATKQGIEGQKLTIHTPLIHLNKAQIIKKG 181

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQ 239
             +G      +    + TCY   +      G  C  C AC  R+ G+ E K     +YQ
Sbjct: 182 LSLG------IDYTLTTTCYQADK-----NGKACGICDACEYRKLGFKEAKVPDQTRYQ 229


>gi|220910546|ref|YP_002485857.1| exsB protein [Cyanothece sp. PCC 7425]
 gi|254764328|sp|B8HQ99|QUEC_CYAP4 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|219867157|gb|ACL47496.1| exsB protein [Cyanothece sp. PCC 7425]
          Length = 229

 Score =  160 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 67/233 (28%), Positives = 102/233 (43%), Gaps = 24/233 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS+T L  A         LSF+YGQR+K EL   + V +    +  +   
Sbjct: 2   KIVILLSGGLDSTTVLYLARSLGHDCYALSFNYGQRHKQELAAAIAVAQLAGVIQHQV-- 59

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKI----QDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    L + G  + +  T ++            +P T+VP RN IFL FA + A  
Sbjct: 60  -----ISFDLGLWGGSALTDYTLDLPQNRAFKEMAEQIPITYVPARNTIFLSFALSYAEA 114

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKKYET 180
           +G T +  G+   DYSGYPDCR D I A++    LG +       + + TPL+ L K   
Sbjct: 115 IGATQVYAGMNAIDYSGYPDCRPDYIAAMQEVYRLGTKQGREGEPIQIITPLIDLTKPAI 174

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
            +L   +G      +   ++ +CY        +    C  C +C LR   + E
Sbjct: 175 IQLGNRLG------VPWAKTWSCYS--DGGGNDPPVACGVCDSCRLRLAAFAE 219


>gi|188534625|ref|YP_001908422.1| queuosine biosynthesis protein QueC [Erwinia tasmaniensis Et1/99]
 gi|254764345|sp|B2VIU4|QUEC_ERWT9 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|188029667|emb|CAO97546.1| Queuosine biosynthesis protein [Erwinia tasmaniensis Et1/99]
          Length = 231

 Score =  160 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 89/233 (38%), Positives = 137/233 (58%), Gaps = 22/233 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL+++D V  ++FDYGQR++ E++    +   +        
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALEQYDEVHCVTFDYGQRHRAEIDVAQQLSASLGVRA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++     A     + LP+TFVPGRNI+F  FA+  A+
Sbjct: 58  -----HKVLDVTMLNELAASSLTRDNIPVPAYDPSASGLPSTFVPGRNIVFFTFASIYAF 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    I+ G CETD+SGYPDCR + ++A+  A+NLGM   + + TPLMWL K ETW LA
Sbjct: 113 QIEAEAIITGACETDFSGYPDCRDEFVKALNRAVNLGMARELRIETPLMWLNKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                   + LI  ++ TCY G        G GC  C AC+LR +G  ++++ 
Sbjct: 173 DYWQQ---LPLIRHQTLTCYNGI------IGDGCGDCAACHLRARGLDQYQQN 216


>gi|144897535|emb|CAM74399.1| ExsB [Magnetospirillum gryphiswaldense MSR-1]
          Length = 230

 Score =  160 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 72/237 (30%), Positives = 106/237 (44%), Gaps = 26/237 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T L+ A +       LSF YGQR++VEL C   V         +
Sbjct: 1   MTKKAVILLSGGLDSATVLALATEWGFDCAALSFRYGQRHQVELACAAKVAAAAGVADHR 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT---FVPGRNIIFLVFAATLA 123
             D       + L + G  + ++       +++          +VP RN I L FA   A
Sbjct: 61  IAD-------IDLRLFGGSALTADIAVPKDRLEAEMEAEIPVTYVPARNTIMLSFALAFA 113

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKY 178
             LG  +I +GV   DYSGYPDCR + I+A ET  NL  ++ V      +H PL+ L K 
Sbjct: 114 EVLGAADIFVGVNAVDYSGYPDCRPEYIKAFETMANLATKAGVEGRRLTIHAPLISLTKA 173

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           +     + +G      +    + +CY          G+ C  C AC LR KG+ +  
Sbjct: 174 QIIAEGKRLG------VDYGLTSSCYDPDVH-----GHACGRCDACRLRLKGFADAG 219


>gi|126180150|ref|YP_001048115.1| exsB protein [Methanoculleus marisnigri JR1]
 gi|189038925|sp|A3CXN3|QUEC_METMJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|125862944|gb|ABN58133.1| preQ(0) biosynthesis protein QueC [Methanoculleus marisnigri JR1]
          Length = 222

 Score =  160 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 64/231 (27%), Positives = 99/231 (42%), Gaps = 23/231 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKW 67
             A+ L SGG DS+T    A D    +  L F YGQR +  E EC   V K +  L    
Sbjct: 2   KKAVCLLSGGMDSTTLAYVAKDTGYDIVALHFTYGQRTEAKERECARAVAKNLDAL---- 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                E  +     +G  S +  +  V     ++  +P+T+VP RN   L  A +LA   
Sbjct: 58  --DFVEISLEHFTKIGASSLTDTSIPVEEYAGEEEGVPSTYVPFRNANLLAIATSLAEAR 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV--HTPLMWLKKYETWKLA 184
               + IGV   DY GYPDCR + I A + A++LG  +   +   TP + + K +  +  
Sbjct: 116 RAEAVFIGVQTGDYPGYPDCRPEFIEAFQRAVDLGTAAEPRIVLMTPFVRMSKVDIVRKG 175

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
             +G      +  E + +CY             C  C +C+ R++ + E  
Sbjct: 176 LALG------VPYELTWSCYQNDD-------RACGVCSSCHYRREAFRELG 213


>gi|163752022|ref|ZP_02159231.1| exsB protein [Shewanella benthica KT99]
 gi|161328074|gb|EDP99243.1| exsB protein [Shewanella benthica KT99]
          Length = 231

 Score =  160 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 98/228 (42%), Positives = 144/228 (63%), Gaps = 21/228 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++FSGGQDS+TCL  AL+++D V  ++FDYGQR+  E+E    + K++         
Sbjct: 3   KAVIVFSGGQDSTTCLIQALEQYDEVHGITFDYGQRHSQEIEVAKELGKRL--------- 53

Query: 70  SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            L    +L + +L +++ S+LT++   V+  + DN LPNTFVPGRNI+FL  A   AY+L
Sbjct: 54  DLASHKVLDVTMLNELAISALTRDDIAVSNTLMDNGLPNTFVPGRNILFLTLAGIFAYQL 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   ++ GVCETDYSGYPDCR D ++A+ +A+  GM+  + + TPLMWL K ETW LA  
Sbjct: 114 GAEAVITGVCETDYSGYPDCRDDFVKAMASALVQGMDRQLELVTPLMWLNKAETWALADK 173

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
               + ++L+ +E+ TCY          G GC +CPAC LRQ G  ++
Sbjct: 174 ---YNSLDLVRDETLTCYN------DIIGSGCGTCPACLLRQTGLDDY 212


>gi|254361904|ref|ZP_04978037.1| PP-loop superfamily ATPase [Mannheimia haemolytica PHL213]
 gi|261492300|ref|ZP_05988862.1| PP-loop superfamily ATPase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261495369|ref|ZP_05991818.1| PP-loop superfamily ATPase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|153093445|gb|EDN74433.1| PP-loop superfamily ATPase [Mannheimia haemolytica PHL213]
 gi|261308972|gb|EEY10226.1| PP-loop superfamily ATPase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261311983|gb|EEY13124.1| PP-loop superfamily ATPase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 222

 Score =  160 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 89/238 (37%), Positives = 136/238 (57%), Gaps = 22/238 (9%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIV 61
           +  + P A+++FSGGQDS+TCL  A+  F  + VE ++F YGQR+ +ELE    +   + 
Sbjct: 1   MTHQKPKAVVIFSGGQDSTTCLFQAIAEFGKENVEVVTFQYGQRHSIELEKARWISNDLG 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                      +  ++  +++  I+ ++L  N A   Q  + PNTFV GRN +FL++ A 
Sbjct: 61  ----------VKQTLIDTSVIKAITTNALMDNNAEIQQQGSTPNTFVDGRNALFLLYTAI 110

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            A   GI  I  GVCETD+SGYPDCR   ++++   +NL M+ +  + TPLM+L K ETW
Sbjct: 111 YAKGQGIQTIFTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYNFNIRTPLMYLTKKETW 170

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
            LA  +G     + I + +HTCYLG          GC+ CP+C LR+KG  E+  + +
Sbjct: 171 ALADKLGAF---DYIRDHTHTCYLGVEG-------GCHDCPSCVLREKGLNEYLAERE 218


>gi|300918173|ref|ZP_07134780.1| ExsB protein [Escherichia coli MS 115-1]
 gi|300414624|gb|EFJ97934.1| ExsB protein [Escherichia coli MS 115-1]
          Length = 231

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 90/230 (39%), Positives = 136/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       + + + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A++LGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+  E+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGMK------GDGCGHCAACNLRTNGLNHY 213


>gi|308273460|emb|CBX30062.1| Queuosine biosynthesis protein queC [uncultured Desulfobacterium
           sp.]
          Length = 230

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 70/240 (29%), Positives = 111/240 (46%), Gaps = 27/240 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T ++ A      + ++SF YGQR+  EL     V +        
Sbjct: 1   MQKKAIVLLSGGLDSTTVMAIAKHEGFDLYSMSFFYGQRHSHELNAAKKVSEVFNVKKHL 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNV---AMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
             +       + L  +G  + ++  K     ++   +  +P T+VP RN IFL  A   A
Sbjct: 61  VIN-------IDLNKIGGSALTADIKVPKARSLNSINKGIPVTYVPARNTIFLAHALAWA 113

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPLMWLKK 177
             +   +I IGV   D+SGYPDCR + I A E   NL  ++ V       + TPL+ + K
Sbjct: 114 EVIKSFDIFIGVNAIDFSGYPDCRPEFISAFEYMANLATKAGVEGKMRLKIRTPLINMTK 173

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            +  K   ++G      +    +H+CY    D     G  C+ C +C+LR+KG+ E   K
Sbjct: 174 AQIIKKGIELG------VDYSLTHSCYDPGPD-----GSACSLCDSCFLRKKGFEEAGLK 222


>gi|152996127|ref|YP_001340962.1| exsB protein [Marinomonas sp. MWYL1]
 gi|189038923|sp|A6VX48|QUEC_MARMS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|150837051|gb|ABR71027.1| exsB protein [Marinomonas sp. MWYL1]
          Length = 219

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 27/234 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +  A++++SGG DS T L+ A+     V  LSF+YGQ++  ELE    V +K+      
Sbjct: 1   MSEKAVVVYSGGMDSFTVLNTAIQNGLDVYALSFNYGQKHSKELEVAAHVCRKLG----- 55

Query: 67  WKDSLGEDHILPLAILGDISHSS----LTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                    ++ +  +  +  +S      +      +D+N+ +T VP RN++ L  A   
Sbjct: 56  -----ISHKVVDITAINSLMANSSLTGDAEIPEGHYEDDNMKSTVVPNRNMVLLSMAIAY 110

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A  L    +  G    D+  YPDCR + + A+     +     V + TP +   K E  K
Sbjct: 111 AVSLEAGKVYYGAHSGDHHIYPDCRPEFVEAMNAVSKIANYQSVEIVTPFLHSSKGEILK 170

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
              D+      NL    + TCY G+          C  C ACY R + + E  +
Sbjct: 171 AGLDM------NLNYANTWTCYNGREKS-------CGKCGACYERLEAFAEQGK 211


>gi|323965131|gb|EGB60590.1| exsB protein [Escherichia coli M863]
 gi|327254772|gb|EGE66388.1| queuosine biosynthesis protein queC [Escherichia coli STEC_7v]
          Length = 231

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 91/230 (39%), Positives = 136/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDSSTCL  AL ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSSTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       + + + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A++LGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+  E+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRSNGLHHY 213


>gi|257059865|ref|YP_003137753.1| exsB protein [Cyanothece sp. PCC 8802]
 gi|256590031|gb|ACV00918.1| exsB protein [Cyanothece sp. PCC 8802]
          Length = 225

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 66/240 (27%), Positives = 107/240 (44%), Gaps = 32/240 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +     A++L SGG DS+T  + AL +   +  LS  YGQR++ EL     + K +    
Sbjct: 1   MIHQSKAVVLLSGGLDSATSAAIALSQGYHLIALSLRYGQRHEKELAAAKNIAKALD--- 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT----FVPGRNIIFLVFAA 120
                    +H +    L     S+LT       Q    PN     +VPGRN +F+  A 
Sbjct: 58  -------ITEHYIVEVNLAQWGGSALTDTALTLPQAGINPNIIPSTYVPGRNTVFIAIAL 110

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWL 175
           +LA   G T I +G+   DYSGYPDCR D ++A +   NL  ++ +      +  PL+  
Sbjct: 111 SLAEAKGATAIFLGINAVDYSGYPDCRPDYLQAYQRLANLSSKAGIEGHAPQLIAPLIND 170

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K +  + A  +G      + +E++ +CY G           C  C +C +R +  ++  
Sbjct: 171 SKVDIVRRAFSLG------VPIEDTWSCYQGGEKP-------CGLCDSCRIRDRALIDAG 217


>gi|223041977|ref|ZP_03612161.1| queuosine biosynthesis protein QueC [Actinobacillus minor 202]
 gi|223017234|gb|EEF15662.1| queuosine biosynthesis protein QueC [Actinobacillus minor 202]
          Length = 221

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 89/235 (37%), Positives = 139/235 (59%), Gaps = 22/235 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +++   A+++FSGGQDS+TCL  A+  F  + VE ++F YGQR+ +ELE    + + +  
Sbjct: 1   MQQPQKAIVIFSGGQDSTTCLFQAIAEFGKENVEVITFQYGQRHAIELEKAQWIAQDLG- 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     +  ++  +++  I+ ++L    A   Q  + PNTFV GRN +FL++AA  
Sbjct: 60  ---------VKQTLVDTSLIKAITSNALMDEQAKIEQQGDKPNTFVDGRNALFLLYAAIY 110

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A R GI  I  GVCETD+SGYPDCR   ++++   +NL M+ +  + TPLM+L K ETW+
Sbjct: 111 AKRQGIQTIFTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYNFNIRTPLMYLTKKETWR 170

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           LA  +G     + I + +HTCYLG          GC++CP+C LR+KG  E+  +
Sbjct: 171 LADQLGAF---DYIRQHTHTCYLGVEG-------GCHTCPSCLLREKGLNEYLAE 215


>gi|318040804|ref|ZP_07972760.1| ExsB [Synechococcus sp. CB0101]
          Length = 225

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 67/235 (28%), Positives = 109/235 (46%), Gaps = 30/235 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           +A+ L SGG DS+T  + AL+   RV  LSFDYGQR++ ELE    +  ++         
Sbjct: 3   TAIALLSGGLDSATAAALALEDGQRVIGLSFDYGQRHRRELEAAARIAAQLG-------- 54

Query: 70  SLGEDHILPLAIL---GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            L E H + + +    G     S     +  +Q + +P+T+VPGRN +F+    +LA   
Sbjct: 55  -LAEHHTISVNLAAWGGSALTDSRMAVPSDGVQADVIPSTYVPGRNTVFIAIGLSLAEAR 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW-----LKKYETW 181
           G   +V+GV   DYSGYPDCR D + A +   +L  ++    H   +W       K +  
Sbjct: 114 GAERLVLGVNAVDYSGYPDCRPDYLDAFQRLADLASKAGREGHGSRLWAPLVTWSKTKIV 173

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           + A  +G      + + ++ +CY G           C  C +C +R    ++   
Sbjct: 174 QEALRLG------VPIADTWSCYSGGEQP-------CGVCDSCRIRDAALIDAGR 215


>gi|320176589|gb|EFW51633.1| Queuosine Biosynthesis QueC ATPase [Shigella dysenteriae CDC
           74-1112]
          Length = 231

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 90/230 (39%), Positives = 136/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KCAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       + + + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A++LGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+  E+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCGHCAACNLRANGLNHY 213


>gi|238791438|ref|ZP_04635076.1| Queuosine biosynthesis protein queC [Yersinia intermedia ATCC
           29909]
 gi|238729054|gb|EEQ20570.1| Queuosine biosynthesis protein queC [Yersinia intermedia ATCC
           29909]
          Length = 232

 Score =  159 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 87/226 (38%), Positives = 129/226 (57%), Gaps = 17/226 (7%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  ++     K  
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRAEIDVARALATQLGAKAHKVL 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDN--NLPNTFVPGRNIIFLVFAATLAYRL 126
           D      +  L  L   S +  +  +    +++   +P+TFVPGRNI+FL  AA  AY++
Sbjct: 62  D------VGMLNELAVSSLTRDSIPIPSFDEEDANTVPSTFVPGRNILFLTLAAIYAYQV 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               ++ GVCETD+SGYPDCR + ++A+  AI+LG+   +   TPLMWL K ETW LA  
Sbjct: 116 QAQTVITGVCETDFSGYPDCRDEFVKALNHAIDLGIGRDIAFVTPLMWLDKAETWALADY 175

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
               + V     ++ TCY G +      G GC  C AC+LR KG  
Sbjct: 176 YQQLERVR---HDTLTCYNGIQ------GDGCGQCAACHLRAKGLA 212


>gi|304395506|ref|ZP_07377389.1| exsB protein [Pantoea sp. aB]
 gi|304356800|gb|EFM21164.1| exsB protein [Pantoea sp. aB]
          Length = 231

 Score =  159 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 92/228 (40%), Positives = 136/228 (59%), Gaps = 22/228 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL+++D V  ++FDYGQR++ E+E    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALEQYDEVHCVTFDYGQRHREEIEVARDLASKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++     A   + + LP+TFVPGRNI+FL  A+  AY
Sbjct: 58  -----HKVLDVTMLNELAVSSLTRDNIPVPAYNPEASGLPSTFVPGRNILFLTLASVYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A++LGM   V   TPLMWL K ETW LA
Sbjct: 113 QVEAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAREVRFETPLMWLNKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
                   ++L+ E++ TCY G +      G GC  C AC LR  G  
Sbjct: 173 DYWQQ---LSLVREQTLTCYNGVK------GDGCGECAACNLRANGLQ 211


>gi|260914428|ref|ZP_05920897.1| transcription regulator ExsB [Pasteurella dagmatis ATCC 43325]
 gi|260631529|gb|EEX49711.1| transcription regulator ExsB [Pasteurella dagmatis ATCC 43325]
          Length = 224

 Score =  159 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 87/229 (37%), Positives = 134/229 (58%), Gaps = 22/229 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
              A+++FSGGQDS+TCL  A+  +  + VE ++F YGQR+ +ELE    + K +     
Sbjct: 9   NRKAVVIFSGGQDSTTCLIQAIQEYGAENVEAVTFQYGQRHAIELEKAQWIAKDLG---- 64

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  +  ++  +++  I+ ++L    A   Q  + PNTFV GRN +FL++AA  A  
Sbjct: 65  ------VKQILIDTSVIKAITQNALMDKNATIEQQGSTPNTFVDGRNALFLLYAAIYAKG 118

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            GIT+I+ GVCETD+SGYPDCR   I+++   +NL M+    + TPLM+L K  TW+LA 
Sbjct: 119 QGITDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYSFNIKTPLMYLTKAHTWQLAD 178

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           ++G    ++ I + +HTCY+G          GC  CP+C LR+ G  E+
Sbjct: 179 ELGA---LDYIRQHTHTCYMGVEK-------GCGECPSCILRENGLTEY 217


>gi|78214105|ref|YP_382884.1| ExsB [Synechococcus sp. CC9605]
 gi|110816272|sp|Q3AGF3|QUEC_SYNSC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|78198564|gb|ABB36329.1| ExsB [Synechococcus sp. CC9605]
          Length = 226

 Score =  159 bits (401), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 66/238 (27%), Positives = 106/238 (44%), Gaps = 27/238 (11%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + +  +A+ L SGG DS+T  + AL++ DRV  LSFDYGQR+  EL+    V +++    
Sbjct: 1   MSQR-TAIALLSGGLDSATAAALALEQGDRVIGLSFDYGQRHLRELDAAAAVAQQLGLAE 59

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT-FVPGRNIIFLVFAATLA 123
                       + LA  G  + +  + ++     +       +VPGRN +F+    +LA
Sbjct: 60  HHC-------ISVNLASWGGSALTDASISIPTDGVEEGRIPPTYVPGRNTVFISVGLSLA 112

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW-----LKKY 178
              G   +V+GV   DYSGYPDCR D + A +T  +L  ++    H   +W       K 
Sbjct: 113 EARGAERLVLGVNAVDYSGYPDCRPDYLNAFQTLADLASKAGREGHGAQLWAPLVQWSKV 172

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
              + A  +G      + +E + +CY G           C  C +C +R     E   
Sbjct: 173 RIVEEALRLG------VPIETTWSCYSGGTHP-------CGVCDSCRIRDAALREAGR 217


>gi|319945216|ref|ZP_08019478.1| transcription regulator ExsB [Lautropia mirabilis ATCC 51599]
 gi|319741786|gb|EFV94211.1| transcription regulator ExsB [Lautropia mirabilis ATCC 51599]
          Length = 228

 Score =  159 bits (401), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 87/236 (36%), Positives = 132/236 (55%), Gaps = 23/236 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +     A ++FSGGQDS+TCL  AL  F    VE ++F YGQR+ +EL+    + + +  
Sbjct: 1   MSSPQKAAVIFSGGQDSTTCLFLALHEFGPGNVEAITFQYGQRHAIELDKARWIAEDLG- 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-NTFVPGRNIIFLVFAAT 121
                     +  ++  +++  I+H++L    A   Q++  P NTFV GRN +FL++AA 
Sbjct: 60  ---------VKQTLIDTSVIKAITHNALLDESATISQEDGQPPNTFVDGRNALFLLYAAI 110

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            A   GI  +  GVCETD+SGYPDCR   ++++   +NL M+    + TPLMWL K +TW
Sbjct: 111 HAKAQGIRTLYTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYTFDIRTPLMWLTKKDTW 170

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            LA  +G     + I + +HTCYLG          GC  CP+C LR++G  E+  +
Sbjct: 171 ALADRLGAF---DYIRQHTHTCYLGVEG-------GCGQCPSCVLRERGLHEYLTE 216


>gi|288931808|ref|YP_003435868.1| exsB protein [Ferroglobus placidus DSM 10642]
 gi|288894056|gb|ADC65593.1| exsB protein [Ferroglobus placidus DSM 10642]
          Length = 243

 Score =  159 bits (401), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 22/225 (9%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV---RKKIVELMPKWK 68
           +L+ SGG DSST L + L +   V  L+F YGQR+  E+E    +    KK+ ++  K  
Sbjct: 4   VLILSGGIDSSTLLYYLLKKGYEVHALTFYYGQRHSKEIEYSKRIVEEAKKVGKVEHKVV 63

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D      ++    L     +S          +     T VP RN+I L  AA  A ++G 
Sbjct: 64  DISSIHELIAKGAL-----TSDEDVPKAFYTEEVQRRTIVPNRNMILLSIAAGYAVKIGA 118

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-ESHVTVHTPLMWLKKYETWKLAQDI 187
             +     ++DYS YPDCR + ++A++TA+ LG   + V +  P + + K E  KL  ++
Sbjct: 119 AEVFYAAHKSDYSVYPDCRKEFVKALDTALYLGNLWTPVELRAPFVDMTKAEIVKLGLEL 178

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
                  +  E + +CY G           C SC  C  R + ++
Sbjct: 179 ------KVPYEHTWSCYEGGERP-------CLSCGTCLERTEAFL 210


>gi|319790596|ref|YP_004152229.1| exsB protein [Thermovibrio ammonificans HB-1]
 gi|317115098|gb|ADU97588.1| exsB protein [Thermovibrio ammonificans HB-1]
          Length = 235

 Score =  159 bits (401), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 78/237 (32%), Positives = 116/237 (48%), Gaps = 30/237 (12%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           A+++FSGG DS+T L WA   F++V  ++F YGQR+ +E+E      +K           
Sbjct: 4   AVVIFSGGLDSTTALYWAKRHFEKVYAITFYYGQRHSLEVEFAKITAEKANVDEHLIFP- 62

Query: 71  LGEDHILPLAILGDISHSSLTKNVA-----MKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 + L+ +G  + +  +  V       +I++  +P T+VP RN IF+  AA  A  
Sbjct: 63  ------VDLSRIGASALTDRSIEVPETSSVEEIKERGIPVTYVPFRNGIFISIAAAYAEA 116

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYET 180
            G TN+V G    DYSGYPDCR   ++A+E A+NLG +         +H PL+ L K + 
Sbjct: 117 KGCTNLVGGWNAVDYSGYPDCRPQFLKAMEEALNLGTKAGAEGKRWHIHAPLINLTKGQI 176

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            KL  ++G           S +CY G           C  C +C LR KGW E  E+
Sbjct: 177 IKLGLELGA------DYSYSLSCYRGDEVP-------CMKCDSCILRAKGWEEVGEE 220


>gi|166712979|ref|ZP_02244186.1| transcriptional regulator [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 224

 Score =  159 bits (401), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 68/232 (29%), Positives = 101/232 (43%), Gaps = 25/232 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+  ++ A ++   V  LS  YGQR+  EL+    V      +  K  
Sbjct: 2   KKAVVLLSGGMDSAAVIALAQEQGFAVYALSVRYGQRHTSELDAAARVAAAQGVIAHKVV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D       + L  +G  + +            + +P T+VP RN I L  A   A  +G 
Sbjct: 62  D-------VDLRSIGGSALTDDIDVPDAG--GDGIPVTYVPARNTIMLSLALGWAEVVGA 112

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKL 183
            ++  GV   DYSGYPDCR + +RA E   NL  ++ V      VH PL +L K +  + 
Sbjct: 113 NDLFCGVNAVDYSGYPDCRPEFVRAFEVLANLATKAGVEGAELRVHAPLQFLSKADIVRE 172

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
              +G      +    + +CY    D     G  C  C AC LR  G+ +  
Sbjct: 173 GVRLG------VDFGLTVSCYRADAD-----GRACGHCDACRLRAAGFADAG 213


>gi|91224505|ref|ZP_01259767.1| exsB protein [Vibrio alginolyticus 12G01]
 gi|91190847|gb|EAS77114.1| exsB protein [Vibrio alginolyticus 12G01]
          Length = 218

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 98/225 (43%), Positives = 133/225 (59%), Gaps = 15/225 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL++FSGGQDS+TCL  AL+ +D V  ++FDYGQR+  E++  + + K++     K  D
Sbjct: 5   KALVVFSGGQDSTTCLIDALNTYDEVHAITFDYGQRHSDEIDIAIELGKQLNIKSHKVLD 64

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +  L   S +     V+  + D N+PNTFVPGRNI+FL +A   AY+LGI 
Sbjct: 65  ------VKSINELAISSLTRDNIPVSNDLSDANVPNTFVPGRNILFLTYACIHAYQLGIQ 118

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
           +I+ GVCETD+SGYPDCR + IR++  + NLGM+    + TPLMWL K ETW LA     
Sbjct: 119 DIITGVCETDFSGYPDCRDNFIRSLNLSCNLGMDKAFNIKTPLMWLTKAETWALADKHNM 178

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            + V      + TCY G        G GC  CPAC LRQ G  E+
Sbjct: 179 LEFVQ---NNTLTCYNGIV------GKGCGECPACLLRQSGLEEY 214


>gi|294141102|ref|YP_003557080.1| exsB protein [Shewanella violacea DSS12]
 gi|293327571|dbj|BAJ02302.1| exsB protein [Shewanella violacea DSS12]
          Length = 228

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 100/236 (42%), Positives = 147/236 (62%), Gaps = 24/236 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++FSGGQDS+TCL  AL+++D V  ++FDYGQR+  E+E    + K++         
Sbjct: 3   KAVVVFSGGQDSTTCLIQALEQYDEVHGITFDYGQRHSQEIEVAKDLGKRLG-------- 54

Query: 70  SLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            L    +L + +L +++ S+LT++   V+  + DN LPNTFVPGRNI+FL  A   AY+L
Sbjct: 55  -LASHKVLDVTMLNELAISALTRDDIPVSNTLMDNGLPNTFVPGRNILFLTLAGIFAYQL 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   ++ GVCETDYSGYPDCR+D ++A+ +A+  GM+  + + TPLMWL K ETW LA  
Sbjct: 114 GAEAVITGVCETDYSGYPDCRNDFVKAMASALVQGMDIELELVTPLMWLNKAETWALADK 173

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF---KEKYQ 239
               + + L+ +E+ TCY          G GC +CPAC LRQ G  ++   K + Q
Sbjct: 174 ---YNCLALVRDETLTCYNNI------LGSGCGTCPACLLRQTGLDDYLSNKTQVQ 220


>gi|268315893|ref|YP_003289612.1| exsB protein [Rhodothermus marinus DSM 4252]
 gi|262333427|gb|ACY47224.1| exsB protein [Rhodothermus marinus DSM 4252]
          Length = 238

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 96/231 (41%), Positives = 137/231 (59%), Gaps = 15/231 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            +AL+L SGGQDS+TCL WAL  F +VE L F YGQ++ VELE    +  +         
Sbjct: 17  ETALVLLSGGQDSTTCLYWALHYFPKVEALGFHYGQKHAVELEQARKIADRAG------- 69

Query: 69  DSLGEDHILPLAIL--GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                  +L L  L  G           A      +LP  FVPGRN +FL  AA+  +  
Sbjct: 70  ---VPFTVLDLRGLLRGSALTEHEQDVSAAHPLAPHLPAAFVPGRNALFLTLAASYGFTR 126

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI ++V G+C+TDYSGYPDCR + I A+E A++L +++ + +HTPLM L K ETW+LA++
Sbjct: 127 GIHDLVGGMCQTDYSGYPDCRREFIDAMERALSLALDTPIRIHTPLMHLTKAETWRLARE 186

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +G   ++++I+E +HT Y G R +R+ WGYG    PA  LR +G+ E K +
Sbjct: 187 LG---ILDVIVELTHTDYNGDRSERHPWGYGRLDNPASILRARGYEEAKAR 234


>gi|238919018|ref|YP_002932532.1| queuosine biosynthesis protein QueC [Edwardsiella ictaluri 93-146]
 gi|259551526|sp|C5BCK3|QUEC_EDWI9 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|238868586|gb|ACR68297.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 229

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 88/231 (38%), Positives = 131/231 (56%), Gaps = 20/231 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  +D V  ++FDYGQR++ E++    +  ++        
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALHHYDDVHCITFDYGQRHRAEIDVARRLAGQLGASA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                  +L + +L +++ SSLT++        ++ +PNTFVPGRN++FL  AA  AY++
Sbjct: 58  -----HKVLDVGLLNELAISSLTRDNIPVPTQSEDGIPNTFVPGRNVLFLTLAAIYAYQV 112

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               ++ GVCETD+SGYPDCR   ++A+  A+ LGM   +   TPLMWL K ETW LA  
Sbjct: 113 EAEAVITGVCETDFSGYPDCRDQFVQALNHAVCLGMARDIRFETPLMWLNKAETWALADY 172

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            G    V     ++ TCY G +      G GC  C AC+LR  G  ++   
Sbjct: 173 YGQLARVR---HDTLTCYNGVQ------GDGCGHCAACHLRAHGLQQYLAN 214


>gi|239996402|ref|ZP_04716926.1| putative regulator protein [Alteromonas macleodii ATCC 27126]
          Length = 218

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 58/227 (25%), Positives = 95/227 (41%), Gaps = 19/227 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            + + ++++SGG DS T L  AL    +V  LSF+YGQR+K EL+    V   +      
Sbjct: 1   MSENVVVIYSGGMDSFTVLHKALKAGKKVHALSFNYGQRHKKELDYAANVCNSLNVPHKI 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              S          ++G  + +S  +      ++ ++  T VP RN+I L  A   A  L
Sbjct: 61  VDISAIN------TLIGGSALTSDIEVPEGHYEEPSMKQTVVPNRNMILLSLAVGYAVSL 114

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G    D++ YPDCR + +  +     +   + VT+ TP +   K         
Sbjct: 115 DANEVYYGAHSGDHAIYPDCRPEFVHKMNDVCGIANYTPVTIMTPYIDDSKTAILTDGLS 174

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
           +G      L   ++ TCY G+          C  C AC  R + + E
Sbjct: 175 MG------LDYGQTWTCYNGREK-------ACGKCGACEERLEAFKE 208


>gi|11498054|ref|NP_069278.1| succinoglycan biosynthesis regulator (exsB) [Archaeoglobus fulgidus
           DSM 4304]
 gi|74514120|sp|O29807|QUEC_ARCFU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|2650185|gb|AAB90792.1| succinoglycan biosynthesis regulator (exsB) [Archaeoglobus fulgidus
           DSM 4304]
          Length = 239

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 20/229 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DSST L + LD    V  L+F YGQ++  E+E    V K       K   
Sbjct: 2   KAVMLLSGGIDSSTLLYYLLDGGYEVHALTFFYGQKHSKEIESAEKVAKAAKVRHLKVDI 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           S   D I         + +   +       +     T VP RN+I L  AA  A ++G  
Sbjct: 62  STIHDLI------SYGALTGEEEVPKAFYSEEVQRRTIVPNRNMILLSIAAGYAVKIGAK 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-ESHVTVHTPLMWLKKYETWKLAQDIG 188
            +      +DYS YPDCR + ++A++TA+ L    + V V  P + + K +  +L   +G
Sbjct: 116 EVHYAAHLSDYSIYPDCRKEFVKALDTAVYLANIWTPVEVRAPFVDMTKADIVRLGLKLG 175

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                 +  E + +CY G           C SC  C  R + ++    K
Sbjct: 176 ------VPYELTWSCYEGGDRP-------CLSCGTCLERTEAFLANGVK 211


>gi|296272040|ref|YP_003654671.1| exsB protein [Arcobacter nitrofigilis DSM 7299]
 gi|296096215|gb|ADG92165.1| exsB protein [Arcobacter nitrofigilis DSM 7299]
          Length = 223

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 69/233 (29%), Positives = 105/233 (45%), Gaps = 20/233 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +  A+ + SGG DS+     A +    +  + F+YGQR +      L   + + E +  
Sbjct: 1   MSKKAICILSGGMDSTLSSYIAKNEGYEIIAIHFNYGQRTEK---RELKAFRDVCENLNV 57

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 E  I     +G  + +    +V +      +P T+VP RN IFL  AA +A + 
Sbjct: 58  KNKY--EIDIPFFTQIGASALTDANIDVPIDGVKPGVPVTYVPFRNGIFLSIAAAVAEKE 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKLA 184
               + IGV E D SGYPDC    I  I+ AIN G +   H+++ TPL+ L K E  K A
Sbjct: 116 NAEAMFIGVVEEDSSGYPDCTDAFINQIKNAINEGTKEATHISIKTPLVKLHKSEIVKKA 175

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            ++      N+ LE + +CY        E    C  C +C LR  G+ +   K
Sbjct: 176 LEL------NVPLELTWSCYK-------EEKEACGVCDSCRLRLNGFAQANSK 215


>gi|270263114|ref|ZP_06191384.1| queuosine biosynthesis protein QueC [Serratia odorifera 4Rx13]
 gi|270042802|gb|EFA15896.1| queuosine biosynthesis protein QueC [Serratia odorifera 4Rx13]
          Length = 232

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 84/232 (36%), Positives = 130/232 (56%), Gaps = 23/232 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL+++D V  ++FDYGQR++ E+E    +   +        
Sbjct: 2   KRAVVVFSGGQDSTTCLVQALEQYDEVHCITFDYGQRHRAEIEVARELAVALG------- 54

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-----NTFVPGRNIIFLVFAATLA 123
             +    +L + +L +++ SSLT++       N        +TFVPGRNI+FL  A+  A
Sbjct: 55  --VKGHKVLDVTMLNELAISSLTRDNIPVPAFNGTQPGGLPSTFVPGRNILFLTLASIYA 112

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           Y++    ++ GVCETD+SGYPDCR + ++A+   + LG+   +   TPLMWL K E W L
Sbjct: 113 YQVEAQAVITGVCETDFSGYPDCRDEFVKALHHGVALGLARDIRFETPLMWLDKAEIWAL 172

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           A      + V     ++ TCY G +      G GC  C AC+LR +G   ++
Sbjct: 173 ADYYRQLERVR---SDTLTCYNGVK------GEGCGECTACHLRAEGLAAYQ 215


>gi|56460022|ref|YP_155303.1| PP-loop superfamily ATPase [Idiomarina loihiensis L2TR]
 gi|81362360|sp|Q5QUZ6|QUEC_IDILO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|56179032|gb|AAV81754.1| Predicted PP-loop superfamily ATPase [Idiomarina loihiensis L2TR]
          Length = 218

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 57/235 (24%), Positives = 96/235 (40%), Gaps = 27/235 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +   ++++SGG DS T L  AL   + V  LSF+YGQR+  ELE    V K+       
Sbjct: 1   MSQKVVVIYSGGMDSFTVLHRALAEGNEVLALSFNYGQRHVKELEVAGNVCKQ------- 53

Query: 67  WKDSLGEDHILPL----AILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                    ++ +    ++L   S +          ++ ++ +T VP RN+I L  A   
Sbjct: 54  ---HGIPHKVVDITAINSLLSGSSLTDDIDIPEGHYEEESMKSTVVPNRNMILLSLAIGY 110

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A     + +  G    D++ YPDCR + +R ++    +     V VH P + + K     
Sbjct: 111 AVSEEASAVYYGAHSGDHAIYPDCRPEFVRQMDVVSKMANYEPVAVHAPYLDVDKNAILA 170

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
               +G      L   ++ TCY G+          C  C AC  R + +     +
Sbjct: 171 DGIKMG------LDYSQTWTCYNGRDK-------ACGKCGACQERLEAFAANGIE 212


>gi|86160217|ref|YP_467002.1| ExsB protein [Anaeromyxobacter dehalogenans 2CP-C]
 gi|110816208|sp|Q2IG55|QUEC_ANADE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|85776728|gb|ABC83565.1| preQ(0) biosynthesis protein QueC [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 234

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 68/246 (27%), Positives = 100/246 (40%), Gaps = 28/246 (11%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M     +A  A++L SGG DSSTCL+ A         LS DYGQR+K EL     + + +
Sbjct: 1   MAKATSEARRAVVLLSGGLDSSTCLAVARAEGLEAHCLSVDYGQRHKGELARARRIARAL 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT----FVPGRNIIFL 116
                +          + L+  G  + +     V     +  +       +VP RN + L
Sbjct: 61  GAAGHRVVK-------VDLSAFGGSALTDAAIAVPKGRSEARMARDIPVTYVPARNTVML 113

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTP 171
             A   A  +G   I +GV   DYSGYPDCR   + A E    +          + +  P
Sbjct: 114 SLALAHAEVIGAEQIFVGVNAIDYSGYPDCRPAFLHAFERLAKVATRAGVEGHPLRIRAP 173

Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
           L+ L K    +L   +G      +    + +CY   R      G  C  C AC LR+KG+
Sbjct: 174 LLRLSKAGIVRLGTKLG------VPYRMTLSCYDPIR------GRACGRCDACSLRRKGF 221

Query: 232 MEFKEK 237
            E   +
Sbjct: 222 AEAGVQ 227


>gi|15602051|ref|NP_245123.1| hypothetical protein PM0186 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|81637300|sp|Q9CP69|QUEC_PASMU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|12720406|gb|AAK02270.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 228

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 85/231 (36%), Positives = 136/231 (58%), Gaps = 22/231 (9%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
            +   A+++FSGGQDS+TCL  A+  +  + VE ++F YGQR+ +ELE    + + +   
Sbjct: 7   NRDRKAVVIFSGGQDSTTCLFQAIQDYGVENVEVVTFQYGQRHAIELEKAKWIAQDLG-- 64

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    +  ++  +++  I+ ++L    A   Q  + PNTFV GRN +FL++ A  A
Sbjct: 65  --------VKQTLIDTSVIKAITQNALMDEQARIEQHGSTPNTFVDGRNALFLLYTAIYA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              GI +I+ GVCETD+SGYPDCR   I+++   +NL M+    + TPLM+L K +TW+L
Sbjct: 117 KGQGIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFHLKTPLMYLTKAQTWQL 176

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           A ++G   +++ I + +HTCY+G          GC  CP+C LR+KG  E+
Sbjct: 177 ADELG---VLDYIRQHTHTCYMGVE-------QGCGECPSCVLREKGLREY 217


>gi|221633771|ref|YP_002522997.1| exsB protein [Thermomicrobium roseum DSM 5159]
 gi|221157005|gb|ACM06132.1| exsB protein [Thermomicrobium roseum DSM 5159]
          Length = 226

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 62/236 (26%), Positives = 102/236 (43%), Gaps = 28/236 (11%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K++  A++L SGG DS+T           +  LSF YGQR++ ELE    + +K+     
Sbjct: 5   KRSQRAVVLLSGGLDSTTLAYLLDAYGFVLYGLSFRYGQRHERELEAARAIAEKL----- 59

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  E  ++ + +      S +      +   + +P+T+VP RN++FL  A   A  
Sbjct: 60  ----RFAEHRVVTIDLAQWGGSSLVGSGEIPRQPTSGIPSTYVPVRNLVFLAIAHAYAEA 115

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLKKYE 179
           +    + I V + DYSGYPDCR + + A + A +L     V       V  P + + K  
Sbjct: 116 IDADAVAIAVSQVDYSGYPDCRGEFLAAYQQAADLASRRFVETGRRIPVLAPFLDVPKSA 175

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
             +L   +G      +   E+ +CY G           C  C +C LR + + E  
Sbjct: 176 IVRLGLRLG------VDYAETWSCYRGGERP-------CQECDSCRLRAQAFAEAG 218


>gi|240949104|ref|ZP_04753452.1| queuosine biosynthesis protein QueC [Actinobacillus minor NM305]
 gi|240296499|gb|EER47131.1| queuosine biosynthesis protein QueC [Actinobacillus minor NM305]
          Length = 221

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 87/235 (37%), Positives = 138/235 (58%), Gaps = 22/235 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +++   A+++FSGGQDS+TCL  A+  F  + VE ++F YGQR+ +ELE    + + +  
Sbjct: 1   MQQPQKAIVIFSGGQDSTTCLFQAIAEFGKENVEVITFQYGQRHAIELEKAQWIAQDLG- 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     +  ++  +++  I+ ++L  + A   Q  + PNTFV GRN +FL++AA  
Sbjct: 60  ---------IKQTLIDTSLIKAITSNALMDDQAKIEQQGDKPNTFVDGRNALFLLYAAIY 110

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A   GI  I  GVCETD+SGYPDCR   ++++   +NL M+ +  + TPLM+  K ETW+
Sbjct: 111 AKGQGIQTIFTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYNFNIRTPLMYFTKKETWR 170

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           LA  +G     + I + +HTCYLG          GC++CP+C LR+KG  E+  +
Sbjct: 171 LADQLGAF---DYIRQHTHTCYLGVEG-------GCHTCPSCLLREKGLNEYLAE 215


>gi|170021183|ref|YP_001726137.1| queuosine biosynthesis protein QueC [Escherichia coli ATCC 8739]
 gi|194437541|ref|ZP_03069638.1| queuosine biosynthesis protein QueC [Escherichia coli 101-1]
 gi|218553011|ref|YP_002385924.1| queuosine biosynthesis protein QueC [Escherichia coli IAI1]
 gi|253774565|ref|YP_003037396.1| queuosine biosynthesis protein QueC [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254160514|ref|YP_003043622.1| queuosine biosynthesis protein QueC [Escherichia coli B str.
           REL606]
 gi|297520136|ref|ZP_06938522.1| queuosine biosynthesis protein QueC [Escherichia coli OP50]
 gi|300930253|ref|ZP_07145666.1| ExsB protein [Escherichia coli MS 187-1]
 gi|189038914|sp|B1J004|QUEC_ECOLC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764340|sp|B7M3T7|QUEC_ECO8A RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|169756111|gb|ACA78810.1| exsB protein [Escherichia coli ATCC 8739]
 gi|194423710|gb|EDX39700.1| queuosine biosynthesis protein QueC [Escherichia coli 101-1]
 gi|218359779|emb|CAQ97320.1| queuosine biosynthesis protein [Escherichia coli IAI1]
 gi|242376226|emb|CAQ30917.1| enzyme in preQ[0] biosynthesis [Escherichia coli BL21(DE3)]
 gi|253325609|gb|ACT30211.1| exsB protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253972415|gb|ACT38086.1| predicted aluminum resistance protein [Escherichia coli B str.
           REL606]
 gi|253976625|gb|ACT42295.1| predicted aluminum resistance protein [Escherichia coli BL21(DE3)]
 gi|300461825|gb|EFK25318.1| ExsB protein [Escherichia coli MS 187-1]
 gi|323963434|gb|EGB58996.1| exsB protein [Escherichia coli H489]
 gi|323972298|gb|EGB67508.1| exsB protein [Escherichia coli TA007]
          Length = 231

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 90/230 (39%), Positives = 137/230 (59%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       + + + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A++LGM   +   TPLMW+ K ETW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+  E+ TCY G +      G GC+ C AC LR  G   +
Sbjct: 173 DYYG---KLDLVRNETLTCYNGIK------GDGCSHCAACNLRANGLNHY 213


>gi|253687450|ref|YP_003016640.1| exsB protein [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|259551546|sp|C6DB62|QUEC_PECCP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|251754028|gb|ACT12104.1| exsB protein [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 231

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 88/231 (38%), Positives = 132/231 (57%), Gaps = 22/231 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  +D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALQHYDDVHCITFDYGQRHRAEIDIARELSLKLGATA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++             +PNTFVPGRNI+FL  A+  AY
Sbjct: 58  -----HKVLDVGLLNELATSSLTRDSIPVPDYDANAQGIPNTFVPGRNILFLTLASIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++G   ++ GVCETD+SGYPDCR + ++A+  AI LG+   +   TPLMWL K ETW LA
Sbjct: 113 QVGAEAVITGVCETDFSGYPDCRDEFVKALNQAIVLGIARDIRFETPLMWLNKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
                   ++ +   + TCY G +      G GC  C AC+LR  G  +++
Sbjct: 173 D---YYQQLDTVRYHTLTCYNGIK------GDGCGQCAACHLRANGLAQYQ 214


>gi|116071887|ref|ZP_01469155.1| ExsB [Synechococcus sp. BL107]
 gi|116065510|gb|EAU71268.1| ExsB [Synechococcus sp. BL107]
          Length = 226

 Score =  158 bits (399), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 71/231 (30%), Positives = 110/231 (47%), Gaps = 22/231 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           +A+ L SGG DS+T  + A +  DRV  LSFDYGQR++ EL+    V   +         
Sbjct: 5   TAIALLSGGLDSATAAALAQESGDRVIGLSFDYGQRHRRELKAAAKVAAHL--------- 55

Query: 70  SLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +L E H + +  LG    S+LT          +++  +P T+VPGRN +F+    +LA  
Sbjct: 56  NLAEHHQVDVN-LGAWGGSALTDPNQTVPTSGVEEGVIPVTYVPGRNTVFIAIGLSLAEA 114

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G   +V+GV   DYSGYPDCR D + A ++  +L  ++    H P +W    E W   +
Sbjct: 115 RGAERLVLGVNAVDYSGYPDCRPDYLDAFQSLASLSSKAGREGHGPQLWAPLVE-WSKTK 173

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            +     + + + E+ +CY G           C  C +C +R     E   
Sbjct: 174 IVDEALRLGVPINETWSCYSGGNRP-------CGVCDSCRIRDSALREAGR 217


>gi|110816231|sp|Q65RE8|QUEC_MANSM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
          Length = 222

 Score =  158 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 86/232 (37%), Positives = 138/232 (59%), Gaps = 22/232 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            A+++FSGGQDS+TCL  A+  +  + VE ++F YGQR+ +ELE    + + +       
Sbjct: 11  KAVVIFSGGQDSTTCLLKAIADYGVENVEAVTFQYGQRHAIELEKAKWIAQDLG------ 64

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                +  ++  +++  I+ +++  N+ +   +  +PNTFV GRN +FL++ A  A   G
Sbjct: 65  ----IKQTLIDTSVIKTITANAMMDNIKITKDEAGMPNTFVDGRNALFLLYTAIYAKGQG 120

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I +I+ GVCETD+SGYPDCR   I+++   +NL M+    +HTPLM+L K +TW+LA ++
Sbjct: 121 IRDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIHTPLMYLTKAQTWQLADEL 180

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           G    +N + E +HTCYLG          GC SCP+C LR+ G  ++    Q
Sbjct: 181 GA---LNYVREHTHTCYLGVEG-------GCGSCPSCILRENGLQQYLASKQ 222


>gi|21243864|ref|NP_643446.1| transcriptional regulator [Xanthomonas axonopodis pv. citri str.
           306]
 gi|81800086|sp|Q8PHW1|QUEC_XANAC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|21109465|gb|AAM37982.1| transcriptional regulator [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 224

 Score =  158 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 68/233 (29%), Positives = 102/233 (43%), Gaps = 25/233 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+  ++ A ++   V  LS  YGQR+  EL+    V      +  K  
Sbjct: 2   KKAVVLLSGGMDSAAVIALAQEQGFAVYALSVRYGQRHTSELDAAARVAAAQGVIAHKVV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D       + L  +G  + +   +        + +P T+VP RN I L  A   A  +G 
Sbjct: 62  D-------VDLRSIGGSALTDDIEVPDAG--GDGIPVTYVPARNTIMLSLALGWAEVIGA 112

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKL 183
            ++  GV   DYSGYPDCR + +RA E   NL  ++ V      VH PL +L K +  + 
Sbjct: 113 NDLFCGVNAVDYSGYPDCRPEFVRAFEVLANLATKAGVEGAGLRVHAPLQFLSKADIVRE 172

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
              +G      +    + +CY    D     G  C  C AC LR  G+ +   
Sbjct: 173 GVRLG------VDFGVTVSCYRADAD-----GRACGHCDACRLRAAGFADAGI 214


>gi|190150422|ref|YP_001968947.1| queuosine biosynthesis protein QueC [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|307263765|ref|ZP_07545371.1| Queuosine biosynthesis protein queC [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|254764292|sp|B3H1X8|QUEC_ACTP7 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|189915553|gb|ACE61805.1| queuosine biosynthesis protein QueC [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|306870886|gb|EFN02624.1| Queuosine biosynthesis protein queC [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 222

 Score =  158 bits (398), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 90/242 (37%), Positives = 140/242 (57%), Gaps = 29/242 (11%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +   P A+++FSGGQDS+TCL  A+  F  + VE ++F YGQR+ +ELE    + K +  
Sbjct: 1   MNSTPKAVVIFSGGQDSTTCLFQAIQEFGVENVEVVTFQYGQRHAIELEKAAWIAKDLG- 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     +  ++  +++  I+ +++ +   +K Q+ N PNTFV GRN +FL++ A  
Sbjct: 60  ---------VKQTLIDTSVIKAITSNAMMEEREIK-QEGNTPNTFVDGRNALFLLYTAIY 109

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A   GI  I  GVCETD+SGYPDCR   ++++   +NL M+ +  + TPLM+L K +TW 
Sbjct: 110 AKGQGIRTIFTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYNFNIRTPLMYLTKKQTWA 169

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF------KE 236
           LA  +G     + I + +HTCYLG          GC++CP+C LR+KG  E+       +
Sbjct: 170 LADKLGAF---DYIRQHTHTCYLGVEG-------GCHTCPSCVLREKGLNEYLSEKTSGQ 219

Query: 237 KY 238
           KY
Sbjct: 220 KY 221


>gi|311280659|ref|YP_003942890.1| exsB protein [Enterobacter cloacae SCF1]
 gi|308749854|gb|ADO49606.1| exsB protein [Enterobacter cloacae SCF1]
          Length = 231

 Score =  158 bits (398), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 89/230 (38%), Positives = 134/230 (58%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  ++        
Sbjct: 2   KRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARTLALQLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       +   + +PNTFVPGRNI+FL   A  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPDADGIPNTFVPGRNILFLTLTAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A+NLGM   +   TPLMWL K +TW LA
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETPLMWLDKAQTWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    ++L+  E+ TCY G +      G GC  C AC LR  G   +
Sbjct: 173 DYWG---KLDLVRNETLTCYNGVK------GDGCGQCAACNLRSNGLSHY 213


>gi|238897963|ref|YP_002923643.1| queuosine biosynthesis protein, ExsB domain protein [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
 gi|229465721|gb|ACQ67495.1| queuosine biosynthesis protein, ExsB domain protein [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
          Length = 236

 Score =  158 bits (398), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 96/235 (40%), Positives = 137/235 (58%), Gaps = 25/235 (10%)

Query: 5   IKKA---PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           ++K      A+L+FSGGQDS+TCL  AL ++D V  ++FDY QR++ E+     + KK+ 
Sbjct: 1   MRKNNPIKRAVLVFSGGQDSTTCLIQALHQYDEVHCITFDYAQRHRSEIAIAQALAKKLQ 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLV 117
                         IL L +L +++ SSLT+        +  + +LPNTFVPGRNI+FL 
Sbjct: 61  A---------TSYKILDLQLLNELTVSSLTRENIPLPKKQNSEGSLPNTFVPGRNIVFLT 111

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
           F+A  AY+L    ++ GVCETD+SGYPDCR + ++++  A+ LGM+ ++T  TPLMWL K
Sbjct: 112 FSAIYAYQLDADVVITGVCETDFSGYPDCRDEFVKSLNHAVTLGMQKNITFVTPLMWLNK 171

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
            ETW LA          LI  ++ TCY G +      G GC  C +C LR KG  
Sbjct: 172 AETWALADYYQQMP---LIRNKTLTCYNGIQ------GDGCGECLSCELRLKGLK 217


>gi|300721983|ref|YP_003711263.1| putative (aluminum) resistance protein with adenine nucleotide
           alpha hydrolase domain [Xenorhabdus nematophila ATCC
           19061]
 gi|297628480|emb|CBJ89045.1| putative (aluminum) resistance protein with adenine nucleotide
           alpha hydrolase domain [Xenorhabdus nematophila ATCC
           19061]
          Length = 232

 Score =  158 bits (398), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 92/236 (38%), Positives = 140/236 (59%), Gaps = 23/236 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    + K++        
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALRQYDEVHCVTFDYGQRHRAEIDVASRISKELGAAA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKI-----QDNNLPNTFVPGRNIIFLVFAATLA 123
                  +L + +L +++ SSLT++          + ++LPNTFVPGRNI+FL  AA  A
Sbjct: 58  -----HKVLDVTLLNELAISSLTRDNIPVPDFNASEKSDLPNTFVPGRNILFLTLAAIYA 112

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           Y++    ++ GVCETD+SGYPDCR + +RA+  A++LG+   +   TPLMWL K ETW L
Sbjct: 113 YQVEAEAVITGVCETDFSGYPDCRDEFVRALNKAVSLGIARDIRFETPLMWLNKAETWAL 172

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           A        ++ I  ++ TCY G +      G GC+ C AC+LR KG   + +  Q
Sbjct: 173 AD---YYKKLDFIRNQTLTCYNGIQ------GDGCSECAACHLRAKGLTNYLDNSQ 219


>gi|148653563|ref|YP_001280656.1| exsB protein [Psychrobacter sp. PRwf-1]
 gi|189038944|sp|A5WGB5|QUEC_PSYWF RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|148572647|gb|ABQ94706.1| exsB protein [Psychrobacter sp. PRwf-1]
          Length = 256

 Score =  158 bits (398), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 77/248 (31%), Positives = 110/248 (44%), Gaps = 39/248 (15%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           A++L SGG DS TCL WA  R+ +V  +SF+YGQR+  EL     +  +           
Sbjct: 26  AVVLLSGGLDSVTCLYWAKARYAKVTAVSFNYGQRHNSELVAAKSIAGQAGVNHKIID-- 83

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNL-----------PNTFVPGRNIIFLVFA 119
                 + +A LG  S +     V     D              PNT+VP RN IFL +A
Sbjct: 84  ------IDIAQLGGSSLTDHDMTVPDGDADKFPTHTDDIDNQAIPNTYVPARNTIFLSYA 137

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW----- 174
             +A      +IVIGV   DYSGYPDCR + I A E   NL  ++ VT H   +      
Sbjct: 138 LAVAEVTDANHIVIGVSSVDYSGYPDCRPEYIEAFEVMANLATKAGVTGHKLHIQTPLQK 197

Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           L K +T +L   +G      +   ++ +CY          G  C  C +C LR++G+ + 
Sbjct: 198 LSKAQTIQLGNSLG------VDYSQTISCYKAD-----SEGRACGICDSCTLRKRGFSDA 246

Query: 235 K----EKY 238
                 +Y
Sbjct: 247 GLADPTRY 254


>gi|218438301|ref|YP_002376630.1| exsB protein [Cyanothece sp. PCC 7424]
 gi|254764329|sp|B7K7J4|QUEC_CYAP7 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|218171029|gb|ACK69762.1| exsB protein [Cyanothece sp. PCC 7424]
          Length = 230

 Score =  158 bits (398), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 26/235 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             P A++L SGG DS+T  + AL        LS  YGQR+  E+E    + + +      
Sbjct: 2   NQPKAVILLSGGLDSATTAAIALASGYEAIALSLFYGQRHHKEIEAAQKIVQVLGIKEHY 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKI-QDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +       + L+  G  + +  +  V       + +P T+VPGRN +F+  A +LA  
Sbjct: 62  SLE-------VNLSQWGGSALTDQSIEVPKAGLNPHLIPITYVPGRNTVFIAIALSLAEA 114

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYET 180
            G   I +G+   DYSGYPDCR + + A +   NL  +       + +  PL+   K + 
Sbjct: 115 KGAQAIYLGINAIDYSGYPDCRPEYLEAFQKLANLSSKIGVEGKTIQLIAPLVKDSKVDI 174

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            + A  +G      + + ++ +CY G+ +        C  C +C +R +  +E  
Sbjct: 175 VRRAVRLG------VPIADTWSCYQGEDEP-------CGLCDSCRIRDRALIEAG 216


>gi|227328854|ref|ZP_03832878.1| queuosine biosynthesis protein QueC [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 231

 Score =  157 bits (397), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 88/231 (38%), Positives = 133/231 (57%), Gaps = 22/231 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  +D V  ++FDYGQR++ E++    + +K+        
Sbjct: 2   KCAVVVFSGGQDSTTCLVQALQDYDDVHCITFDYGQRHRAEIDVARELSQKLGATA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++             +PNTFVPGRNI+FL  A+  AY
Sbjct: 58  -----HKVLDVGLLNELATSSLTRDSIPVPDYDANAQGIPNTFVPGRNILFLTLASIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++G   ++ GVCETD+SGYPDCR + ++A+  AI LG+   +   TPLMWL K ETW LA
Sbjct: 113 QVGAEAVITGVCETDFSGYPDCRDEFVKALNQAIVLGIARDIRFETPLMWLNKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
                   ++ +   + TCY G +      G GC  C AC+LR  G  +++
Sbjct: 173 D---YYQQLDTVRYHTLTCYNGIK------GDGCGQCAACHLRANGLAQYQ 214


>gi|118594348|ref|ZP_01551695.1| hypothetical protein MB2181_01730 [Methylophilales bacterium
           HTCC2181]
 gi|118440126|gb|EAV46753.1| hypothetical protein MB2181_01730 [Methylophilales bacterium
           HTCC2181]
          Length = 228

 Score =  157 bits (397), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 68/238 (28%), Positives = 110/238 (46%), Gaps = 26/238 (10%)

Query: 5   IKKA--PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +KK    SA++L SGG DS+T L+ A     +   ++ +Y QR+  EL+    +      
Sbjct: 1   MKKKVSKSAVILLSGGLDSATVLAIAKAEGYQCYAMNINYQQRHSAELKYAKRLAHHYDV 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
              K  D       + L+ L   S ++ +  +     +  +P+T+VP RN I +  A   
Sbjct: 61  EEYKVVD-------IDLSWLTGSSLTNKSMIIPQSASE-GIPSTYVPARNTIMMTLALAW 112

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKK 177
           A  +    I IGV   DYSGYPDCR + I++ E   NL  ++      +T+H PL+ L K
Sbjct: 113 AETIKSQAIFIGVNAIDYSGYPDCREEYIKSFEVMANLATKTGVEGSRITIHAPLIHLDK 172

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            E   L    G      L   ++ +CY    +     G+ C  C +C LR++G+ +  
Sbjct: 173 AEIISLGIQKG------LDYSKTVSCYQATEE-----GHACGKCDSCRLRREGFEKLG 219


>gi|320355234|ref|YP_004196573.1| preQ(0) biosynthesis protein QueC [Desulfobulbus propionicus DSM
           2032]
 gi|320123736|gb|ADW19282.1| preQ(0) biosynthesis protein QueC [Desulfobulbus propionicus DSM
           2032]
          Length = 229

 Score =  157 bits (397), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 73/243 (30%), Positives = 112/243 (46%), Gaps = 32/243 (13%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN+       A++L SGG DS+T L+ A         LSF YGQR  VEL+    + +  
Sbjct: 1   MNE-----RQAVVLLSGGLDSTTVLAIAQSLGFTCNCLSFQYGQRQSVELDRARVIGRLA 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLV 117
                           + L  +G  + ++  +   +  +   + ++P T+VPGRNI+FL 
Sbjct: 56  GVARHLV-------LRVDLDAIGGSALTTAIEVPKDRPLNEMEQDIPVTYVPGRNILFLA 108

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPL 172
            A + A  LG+++I +G+   DYSGYPDCR   ++A E   NLG +         +H PL
Sbjct: 109 HALSWAEVLGVSDIFLGINAVDYSGYPDCRPQFLQAFEQMANLGTKAGTTGRPFRLHAPL 168

Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
           + L K E      ++G      +    +H+CY    D        C  C AC LR +G+ 
Sbjct: 169 IQLSKKEIILKGMELG------VDYSLTHSCYDPAGD------KACGRCDACQLRLQGFR 216

Query: 233 EFK 235
           E  
Sbjct: 217 EAG 219


>gi|67920157|ref|ZP_00513677.1| ExsB [Crocosphaera watsonii WH 8501]
 gi|67857641|gb|EAM52880.1| ExsB [Crocosphaera watsonii WH 8501]
          Length = 230

 Score =  157 bits (397), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 66/239 (27%), Positives = 117/239 (48%), Gaps = 30/239 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +   P A++L SGG DS+T  + A+D+   V  LS +YGQR++ ELE    + + +    
Sbjct: 1   MTHKPIAVVLLSGGLDSATSAAIAIDQGYEVIALSLEYGQRHQRELEAAKTIAEAL---- 56

Query: 65  PKWKDSLGEDHILPLAIL---GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                ++ + +I+ + I    G     S        +  N +P+T+VPGRN +F+  A +
Sbjct: 57  -----NITQHYIIDVNIAQWGGSSLTDSSLSLPQGGVDPNEIPSTYVPGRNTVFIGLALS 111

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLK 176
           L    G T I +G+   DYSGYPDCR + ++A +   NL  ++ +      +  PL+   
Sbjct: 112 LGEAKGATAIYLGINAVDYSGYPDCRPEYLQAYQNLANLSSKAGIEGKAPQLVAPLISKT 171

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           K +  K A  +G      + + ++ +CY G+++        C  C +C +R +  +E  
Sbjct: 172 KVDIVKDAIRLG------VPISKTWSCYQGEQEP-------CGLCDSCRIRDRALIEAG 217


>gi|32035296|ref|ZP_00135303.1| COG0603: Predicted PP-loop superfamily ATPase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|303250158|ref|ZP_07336360.1| queuosine biosynthesis protein QueC [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307246013|ref|ZP_07528095.1| Queuosine biosynthesis protein queC [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307259430|ref|ZP_07541155.1| Queuosine biosynthesis protein queC [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|302651221|gb|EFL81375.1| queuosine biosynthesis protein QueC [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306852948|gb|EFM85171.1| Queuosine biosynthesis protein queC [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306866366|gb|EFM98229.1| Queuosine biosynthesis protein queC [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 222

 Score =  157 bits (397), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 88/232 (37%), Positives = 137/232 (59%), Gaps = 23/232 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +   P A+++FSGGQDS+TCL  A+  F  + VE ++F YGQR+ +ELE    + K +  
Sbjct: 1   MNSTPKAVVIFSGGQDSTTCLFQAIQEFGVENVEVVTFQYGQRHAIELEKAAWIAKDLG- 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     +  ++  +++  I+ +++ +   +K Q+ N PNTFV GRN +FL++ A  
Sbjct: 60  ---------VKQTLIDTSVIKAITSNAMMEEREIK-QEGNTPNTFVDGRNALFLLYTAIY 109

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A   GI  I  GVCETD+SGYPDCR   ++++   +NL M+ +  + TPLM+L K +TW 
Sbjct: 110 AKGQGIRTIFTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYNFNIRTPLMYLTKKQTWA 169

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           LA  +G     + I + +HTCYLG          GC++CP+C LR+KG  E+
Sbjct: 170 LADKLGAF---DYIRQHTHTCYLGVEG-------GCHTCPSCVLREKGLNEY 211


>gi|262375548|ref|ZP_06068781.1| queuosine biosynthesis protein queC [Acinetobacter lwoffii SH145]
 gi|262309802|gb|EEY90932.1| queuosine biosynthesis protein queC [Acinetobacter lwoffii SH145]
          Length = 222

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 70/236 (29%), Positives = 101/236 (42%), Gaps = 26/236 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             P A++L SGG DS+TCL+WA  R      LSF YGQR+  EL+    + ++       
Sbjct: 1   MRPRAIVLLSGGLDSTTCLAWAQAR-YECIALSFRYGQRSTTELDAARALTQRAGVEHRV 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     + L  LG  + +  +  V    Q       +VP RN IFL +A   A   
Sbjct: 60  IN--------IDLGNLGGSALTDHSIEVPDHEQAGIPIT-YVPARNTIFLSYALAAAEVF 110

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETW 181
               IVIG+   DYSGYPDCR + I A      L  +  V        TPL+ L K    
Sbjct: 111 EAEAIVIGINAVDYSGYPDCRPEFIDAFANMARLATKVGVEGQALKFETPLLHLSKANII 170

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +L  + G      +   ++ +CY          G  C  C +C LR++G+ +   +
Sbjct: 171 RLGIEHG------VDYSQTVSCYQADD-----QGRACGKCDSCRLRKQGFADAGVE 215


>gi|56963894|ref|YP_175625.1| aluminum resistance protein [Bacillus clausii KSM-K16]
 gi|81366060|sp|Q5WG41|QUEC_BACSK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|56910137|dbj|BAD64664.1| aluminum resistance protein [Bacillus clausii KSM-K16]
          Length = 221

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 87/232 (37%), Positives = 131/232 (56%), Gaps = 21/232 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+++FSGGQDS+TCL WA +R+  +  + FDYGQR+K E++C + +           
Sbjct: 3   EDKAVVVFSGGQDSTTCLFWAKERYRSLHAVIFDYGQRHKEEIQCAVDIA---------- 52

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKI--QDNNLPNTFVPGRNIIFLVFAATLAYR 125
            +      +  + +L  ++ ++LT+        +    P+TFV GRN +FL FAA  A  
Sbjct: 53  NEQGVPYKVFDMGLLNQLTANALTRENISVQAGEAGESPSTFVAGRNHLFLSFAAVYARE 112

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G  +I+ GVCETD+SGYPDCR   ++++   +NL M+    +HTPLMWL K ETW LA 
Sbjct: 113 MGAKHIITGVCETDFSGYPDCRDVFVKSLNVTLNLAMDEQFVIHTPLMWLNKKETWALAD 172

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            +G    +  I  ++ TCY G R      G GC +CP+C LRQ G   +  +
Sbjct: 173 KMGQ---LEYIRAKTLTCYEGIR------GDGCGTCPSCQLRQNGLDLYLRE 215


>gi|165976518|ref|YP_001652111.1| queuosine biosynthesis protein QueC [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|303253331|ref|ZP_07339480.1| queuosine biosynthesis protein QueC [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|189038889|sp|B0BQ32|QUEC_ACTPJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|165876619|gb|ABY69667.1| queuosine biosynthesis protein QueC [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|302648013|gb|EFL78220.1| queuosine biosynthesis protein QueC [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
          Length = 222

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 88/232 (37%), Positives = 136/232 (58%), Gaps = 23/232 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +   P A+++FSGGQDS+TCL  A+  F    VE ++F YGQR+ +ELE    + K +  
Sbjct: 1   MNSTPKAVVIFSGGQDSTTCLFQAIQEFGVKNVEVVTFQYGQRHAIELEKAAWIAKDLG- 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     +  ++  +++  I+ +++ +   +K Q+ N PNTFV GRN +FL++ A  
Sbjct: 60  ---------VKQTLIDTSVIKAITSNAMMEEREIK-QEGNTPNTFVDGRNALFLLYTAIY 109

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A   GI  I  GVCETD+SGYPDCR   ++++   +NL M+ +  + TPLM+L K +TW 
Sbjct: 110 AKGQGIRTIFTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYNFNIRTPLMYLTKKQTWA 169

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           LA  +G     + I + +HTCYLG          GC++CP+C LR+KG  E+
Sbjct: 170 LADKLGAF---DYIRQHTHTCYLGVEG-------GCHTCPSCVLREKGLNEY 211


>gi|116327179|ref|YP_796899.1| PP-loop superfamily ATPase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116332169|ref|YP_801887.1| PP-loop superfamily ATPase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122280102|sp|Q04PP1|QUEC_LEPBJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|122284975|sp|Q055M9|QUEC_LEPBL RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|116119923|gb|ABJ77966.1| PP-loop superfamily ATPase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125858|gb|ABJ77129.1| PP-loop superfamily ATPase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 242

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 79/238 (33%), Positives = 113/238 (47%), Gaps = 24/238 (10%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
              ++   A++L SGG DS+TCL  AL    +++ LSFDYGQ++K+EL     + +++  
Sbjct: 20  KSSQENDKAVVLLSGGLDSTTCLYQALADGKKIQALSFDYGQKHKIELSYAKKITRQLGI 79

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                        + P   LG        +     +    +PNT+VPGRNI+FL FA  L
Sbjct: 80  SHTI-------QKLKPELFLGSSLTQKSLRVPKNSLGKEEIPNTYVPGRNILFLSFAVCL 132

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKK 177
           A   G  +I IGV   DYSGYPDCR + I+  ETAI LG +       + + TPL  L K
Sbjct: 133 AEGTGSNSIYIGVNAMDYSGYPDCRPEFIKTYETAIQLGTKKGNQGSPIKIVTPLQNLSK 192

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            E   L   +       +    + +CY        +    C  C AC LR+KG+ E  
Sbjct: 193 KEIVLLGNRL------QVPFHLTFSCYDP------KNRKACGKCDACLLRKKGFQETG 238


>gi|312876999|ref|ZP_07736973.1| exsB protein [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796230|gb|EFR12585.1| exsB protein [Caldicellulosiruptor lactoaceticus 6A]
          Length = 217

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 54/229 (23%), Positives = 96/229 (41%), Gaps = 27/229 (11%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           ++ SGG DS+T L     +   V  +SF YGQ++  ELE      K +            
Sbjct: 1   MVLSGGVDSTTLLYDVKSQGYEVFAISFLYGQKHSKELEFAKKTCKLLS----------V 50

Query: 73  EDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              I+ ++   +++ S+LT            D+ +  T VP RN++ L  +A  A  LG 
Sbjct: 51  PHKIVDISFFAELAPSALTTPDWNVPEGYYTDSTMKQTVVPNRNMVLLSISAAYAISLGA 110

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G    D+  YPDCR + + A++ A+ L     + +  P + +KK +  +   ++G
Sbjct: 111 KKLFYGAHAGDHPIYPDCRKEFVEAMKNALYLADYIGLELEAPYVDMKKEDILRRGLELG 170

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                 +    + +CY G +         C  C  C  R + + +   K
Sbjct: 171 ------VDYSLTWSCYKGGQK-------ACGRCGTCTERIEAFKKVGVK 206


>gi|113953927|ref|YP_732051.1| exsB protein [Synechococcus sp. CC9311]
 gi|113881278|gb|ABI46236.1| exsB protein [Synechococcus sp. CC9311]
          Length = 237

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 71/238 (29%), Positives = 113/238 (47%), Gaps = 21/238 (8%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           N  +  + +A+ L SGG DS+T  + A+    RV  LSFDYGQR++ EL+  + + K + 
Sbjct: 9   NASMTDS-TAIALLSGGLDSATAAALAIKSGFRVIGLSFDYGQRHRRELDAAVEIAKAL- 66

Query: 62  ELMPKWKDSLGEDHIL--PLAILGDISHSSLTKNVAMKIQDNN-LPNTFVPGRNIIFLVF 118
                   +L E H +   LA+ G  S +   + +     + + +PNT+VPGRN +F+  
Sbjct: 67  --------NLAEHHTINVDLAMWGGSSLTDHAQTLPTSGVETSIIPNTYVPGRNTVFIAI 118

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             +LA   G   +V+GV   DYSGYPDCR D + A +   +L   +    H P +W    
Sbjct: 119 GLSLAEARGADRLVLGVNAVDYSGYPDCRPDYLEAFQDLADLSSRAGREGHGPKLWAPLV 178

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           E W   Q       + + +E + +CY G           C  C +C +R +  +    
Sbjct: 179 E-WSKQQIAEEALHLGIPIERTWSCYSGGDVP-------CGVCDSCRIRDEALLAAGR 228


>gi|332993961|gb|AEF04016.1| putative regulator protein [Alteromonas sp. SN2]
          Length = 218

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/227 (26%), Positives = 94/227 (41%), Gaps = 19/227 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            + + ++++SGG DS T L  AL     V  LSFDYGQR+K EL+    V K +      
Sbjct: 1   MSENVVVIYSGGMDSFTVLHKALRDGKTVHALSFDYGQRHKKELDYAAAVCKSLNVPHKI 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              S         +++G  S +S         ++ ++  T VP RN+I L  A   A  L
Sbjct: 61  VDISAIN------SLIGGSSLTSDIDVPEGHYEEPSMKQTVVPNRNMILLSLAVGYAVSL 114

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G    D++ YPDCR + +  +     +   + V + TP +   K         
Sbjct: 115 EANEVYYGAHSGDHAIYPDCRPEFVEKMSDVCRIANYTPVEIVTPYIKDSKTAILTDGLK 174

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
           +G      L   E+ TCY G+          C  C AC  R + + E
Sbjct: 175 MG------LDYGETWTCYNGREK-------ACGKCGACEERLEAFRE 208


>gi|268680496|ref|YP_003304927.1| exsB protein [Sulfurospirillum deleyianum DSM 6946]
 gi|268618527|gb|ACZ12892.1| exsB protein [Sulfurospirillum deleyianum DSM 6946]
          Length = 222

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 95/229 (41%), Positives = 143/229 (62%), Gaps = 17/229 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL++FSGGQDS+TCL WA +RF+ VE+++FDYGQ++KVE+     +   +         
Sbjct: 3   KALVVFSGGQDSTTCLGWAKNRFEYVESITFDYGQKHKVEIAQAQKIASLL--------- 53

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT----FVPGRNIIFLVFAATLAYR 125
              ++ +L L     ++ S+L  +       + +       FVP RN IF   A   A +
Sbjct: 54  -HVKNTLLSLDAFSQLNDSALIDSTQDIGAHHRVHTNLPASFVPNRNAIFFTLAHAFAQK 112

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            GI +I+IGV +TDYSGYPDCR   ++A+E A+NLG E+++T H PLM L K ET+ L++
Sbjct: 113 QGIEHIIIGVNQTDYSGYPDCREPFVKALELALNLGSEANITFHYPLMHLTKAETFLLSK 172

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           + G   +++L+L ESHTCY G+  +++ WGYGC  CPAC LR++GW  +
Sbjct: 173 EEG---VLDLVLNESHTCYNGEHSEKHTWGYGCGECPACVLRKQGWEAY 218


>gi|307150182|ref|YP_003885566.1| exsB protein [Cyanothece sp. PCC 7822]
 gi|306980410|gb|ADN12291.1| exsB protein [Cyanothece sp. PCC 7822]
          Length = 227

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 64/231 (27%), Positives = 104/231 (45%), Gaps = 26/231 (11%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           A++L SGG DS+T  + AL     V  LS  YGQR++ EL+    V   +        D 
Sbjct: 6   AVVLLSGGLDSATSAAIALADGYEVIALSLSYGQRHQRELQAAKKVVAALDIKSHYIMD- 64

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNN-LPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 + L+  G  S +    ++       N +PNT+VPGRN +F+  A +LA   G  
Sbjct: 65  ------VNLSQWGGSSLTDELIDMPTDGVKPNLIPNTYVPGRNTVFIAIALSLAEAKGAE 118

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKLA 184
            I +G+   DYSGYPDCR + I A +   +L  +       + +  PL+   K +  + A
Sbjct: 119 AIYLGINAVDYSGYPDCRPEYIEAFQKLASLSSKVGVEGKAIQLMAPLVKDSKADIVRRA 178

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
             +       + + ++ +CY G  +        C  C +C +R +  +E  
Sbjct: 179 MSL------EVPIADTWSCYQGGDEP-------CGLCDSCRIRNRALIEAG 216


>gi|242240286|ref|YP_002988467.1| exsB protein [Dickeya dadantii Ech703]
 gi|242132343|gb|ACS86645.1| exsB protein [Dickeya dadantii Ech703]
          Length = 231

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 87/231 (37%), Positives = 137/231 (59%), Gaps = 22/231 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    + +++          
Sbjct: 4   AVVVFSGGQDSTTCLIQALQQYDEVHCVTFDYGQRHRAEIDAAAELTQRLGARA------ 57

Query: 71  LGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                IL + +L  ++ SSLT++             LP+TFVPGRNI+FL  A+  AY++
Sbjct: 58  ---HKILNVELLNQLAVSSLTRDSIPVPEYDETSEGLPSTFVPGRNILFLTLASIYAYQV 114

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G  +++ GVCETD+SGYPDCR + ++A+  A++LG+   +   TPLMWL K ETW LA  
Sbjct: 115 GAESVITGVCETDFSGYPDCRDEFVKALNQAVSLGLAREIRFVTPLMWLNKAETWALAD- 173

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                 ++ +   + TCY G +      G GC  C AC+LR +G  ++++ 
Sbjct: 174 --YYHQLDTVKHHTLTCYNGIK------GEGCGQCAACHLRAQGLTQYQQN 216


>gi|291326893|ref|ZP_06126250.2| ExsB protein [Providencia rettgeri DSM 1131]
 gi|291312421|gb|EFE52874.1| ExsB protein [Providencia rettgeri DSM 1131]
          Length = 237

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 90/233 (38%), Positives = 136/233 (58%), Gaps = 23/233 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A+++FSGGQDS+TCL  AL  +D V  ++FDYGQR++ E+E    +   +      
Sbjct: 8   PMKRAVVVFSGGQDSTTCLIQALQNYDEVHCVTFDYGQRHRFEIEVAQKLSVSLGAAA-- 65

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKI-----QDNNLPNTFVPGRNIIFLVFAAT 121
                    +L + +L +++ SSLT++          + + LP+TFVPGRNI+FL  AA 
Sbjct: 66  -------HKVLDVTLLNELAISSLTRDNIPVPDFAESESSALPSTFVPGRNILFLTLAAI 118

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            AY++    ++ GVCETD+SGYPDCR + ++A+  A++LG+  ++   TPLMWL K +TW
Sbjct: 119 YAYQVQAEAVITGVCETDFSGYPDCRDEFVKALNHAVDLGLAKNIRFETPLMWLNKAQTW 178

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            LA   G    +  I +++ TCY G +      G GC  C AC+LR KG  E+
Sbjct: 179 ALADSYGH---LETIRQQTLTCYNGIQ------GDGCGECAACHLRSKGLNEY 222


>gi|330996187|ref|ZP_08320077.1| protein ExsB [Paraprevotella xylaniphila YIT 11841]
 gi|329573691|gb|EGG55282.1| protein ExsB [Paraprevotella xylaniphila YIT 11841]
          Length = 231

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 86/236 (36%), Positives = 132/236 (55%), Gaps = 16/236 (6%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +     +AL++FSGGQDS+TCL WA   F +V  LSF YGQ++  E+E    +  +    
Sbjct: 1   MTMNKETALVVFSGGQDSTTCLFWAKKHFKKVVALSFVYGQKHVKEVELAKAIASRAGV- 59

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                       +  +  LG  S +  T  +  +  + + PNTFVPGRN+ F+  AA  A
Sbjct: 60  ------DWDCMDVSFVGSLGRNSLTDSTMQMDEEKPEGSCPNTFVPGRNLFFISIAAVYA 113

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              G+ +IV GV +TD+SGYPDCR   I+++   +NL M+    +HTPLMW+ K +TW L
Sbjct: 114 RERGVNHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVLHTPLMWIDKCQTWAL 173

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           A ++G   +++L+  ++ TCY G +      G GC  CPAC LR +G  ++  + +
Sbjct: 174 ADELG---VLDLVRHDTLTCYNGVQ------GDGCGHCPACKLRNEGLHKYLAEKE 220


>gi|172036294|ref|YP_001802795.1| transcription regulator [Cyanothece sp. ATCC 51142]
 gi|171697748|gb|ACB50729.1| transcription regulator [Cyanothece sp. ATCC 51142]
          Length = 233

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 26/237 (10%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +   P A++L SGG DS+T  + A+D+   V  LS  YGQR++ EL+    + + +    
Sbjct: 1   MTNKPVAVVLLSGGLDSATSAAIAIDQGYEVIALSLRYGQRHQRELDAAKIIAQTLNITQ 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
               D       + +A  G  S +  + +     +    +P+T+VPGRN +F+  A +LA
Sbjct: 61  HYTID-------VNIAQWGGSSLTDTSLSLPQSGVDATIIPSTYVPGRNTVFIALALSLA 113

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKY 178
              G   I +G+   DYSGYPDCR D ++A +T  NL  +         +  PL+   K 
Sbjct: 114 EAKGAQAIYLGINAVDYSGYPDCRPDYLQAYQTLANLSSKAGLVGKAPQLLAPLITKTKV 173

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           +  K A  +G      + + ++ +CY G+++        C  C +C +R +  +E  
Sbjct: 174 DIIKDAIKLG------VPITKTWSCYQGEQEP-------CGLCDSCRIRDQALIEAG 217


>gi|209695424|ref|YP_002263353.1| queuosine biosynthesis protein QueC [Aliivibrio salmonicida
           LFI1238]
 gi|254764296|sp|B6EH68|QUEC_ALISL RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|208009376|emb|CAQ79650.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238]
          Length = 227

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 92/230 (40%), Positives = 135/230 (58%), Gaps = 15/230 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           +A+++FSGGQDS+TCL  AL  +D V  ++FDYGQR+  E+E    V   +     K  D
Sbjct: 3   TAIVVFSGGQDSTTCLIQALTHYDHVHCITFDYGQRHNQEIEVAKSVALDLGATSHKVMD 62

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  L  L   S +     V+ ++Q+N LPN+FVPGRNI+FL  A   AY+LG  
Sbjct: 63  ------VGLLNELAVSSLTRDNIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQLGAE 116

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
           +++ GVCETD+SGYPDCR + +++I  ++ LGM+  + + TPLMWL K ETW LA   G 
Sbjct: 117 SVITGVCETDFSGYPDCRDEFVKSINQSLVLGMDRKLKIDTPLMWLNKAETWALADKYG- 175

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
              ++ +  ++ TCY G        G GC  CP+C LR+ G  ++    +
Sbjct: 176 --KLDYVRNQTLTCYNG------VIGDGCGDCPSCDLRKNGLDDYLANKE 217


>gi|21232444|ref|NP_638361.1| transcriptional regulator [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66767473|ref|YP_242235.1| transcriptional regulator [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188990579|ref|YP_001902589.1| Putative transcriptional regulator, ExsB family [Xanthomonas
           campestris pv. campestris str. B100]
 gi|81306547|sp|Q4UXK8|QUEC_XANC8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|81793141|sp|Q8P6F6|QUEC_XANCP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764391|sp|B0RPZ6|QUEC_XANCB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|21114225|gb|AAM42285.1| transcriptional regulator [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66572805|gb|AAY48215.1| transcriptional regulator [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|167732339|emb|CAP50531.1| Putative transcriptional regulator, ExsB family [Xanthomonas
           campestris pv. campestris]
          Length = 224

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 68/232 (29%), Positives = 101/232 (43%), Gaps = 25/232 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+  ++ A ++   V  LS  YGQR+  EL+    V      +  K  
Sbjct: 2   KKAVVLLSGGMDSAAVIALAQEQGFAVHALSVRYGQRHTSELDAAARVAAAQGVVAHKVV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D       + L  +G  + ++             +P T+VP RN I L  A   A  +G 
Sbjct: 62  D-------VDLRSIGGSALTADIDVPEAG--GAGIPVTYVPARNTIMLSLALGWAEVVGA 112

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKL 183
            ++  GV   DYSGYPDCR + +RA E   NL  ++ V      VH PL +L K +  + 
Sbjct: 113 NDLFCGVNAVDYSGYPDCRPEFVRAFEVLANLATKAGVEGAGLRVHAPLQFLSKADIVRA 172

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
              +G      +    + +CY    D     G  C  C AC LR  G+ +  
Sbjct: 173 GVRLG------VDFGLTVSCYNADAD-----GRACGHCDACRLRAAGFADAG 213


>gi|149909159|ref|ZP_01897817.1| queuosine biosynthesis protein QueC [Moritella sp. PE36]
 gi|149807910|gb|EDM67855.1| queuosine biosynthesis protein QueC [Moritella sp. PE36]
          Length = 242

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 98/235 (41%), Positives = 139/235 (59%), Gaps = 21/235 (8%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           + A  A+L+FSGGQDS+TCL  AL R+D V+ ++FDYGQR+  E+E              
Sbjct: 4   QTANKAVLVFSGGQDSTTCLVDALQRYDSVDCITFDYGQRHSQEIEVAKKTAAYFG---- 59

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                +    I+ + +LG+++ SSLT++   V+ ++ +N LPN+FVPGRNI+F+  A+  
Sbjct: 60  -----VKNHKIINVDLLGELAISSLTRDDIAVSHELMENGLPNSFVPGRNILFMTLASIY 114

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           AY++G   ++ GVCETD+SGYPDCR + I++I  A NLGM       TPLMWL K ETW 
Sbjct: 115 AYQIGANTVITGVCETDFSGYPDCRDEFIKSINQACNLGMAKDFKFETPLMWLNKAETWA 174

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           LA      D ++ +  +S TCY G        G GC  CPAC LR  G  ++   
Sbjct: 175 LAD---LHDELDFVTHQSLTCYNGIV------GKGCGDCPACLLRNNGLNDYLTN 220


>gi|85058654|ref|YP_454356.1| queuosine biosynthesis protein QueC [Sodalis glossinidius str.
           'morsitans']
 gi|110816262|sp|Q2NV74|QUEC_SODGM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|84779174|dbj|BAE73951.1| conserved hypothetical protein [Sodalis glossinidius str.
           'morsitans']
          Length = 231

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 89/235 (37%), Positives = 136/235 (57%), Gaps = 22/235 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  ++        
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALSQYDEVHCVTFDYGQRHRAEIDVARKLAMQLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  ++   +L  ++ SSLT++       +     LP+TFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVIDAGLLNALAVSSLTRDNITFPGYEDSAGGLPSTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++  + ++ GVCETD+SGYPDCR + I+A+  A+NLGM   ++  TPLMWL K ETW LA
Sbjct: 113 QVEASAVITGVCETDFSGYPDCRDNFIKALNAAVNLGMARELSFVTPLMWLDKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
                   ++ +  ++ TCY G +      G GC  C AC+LR  G   ++ + Q
Sbjct: 173 D---YYHQLDRVRHDTLTCYNGIK------GDGCGQCAACHLRTHGLAAYRAQPQ 218


>gi|183601069|ref|ZP_02962562.1| hypothetical protein PROSTU_04692 [Providencia stuartii ATCC 25827]
 gi|188019409|gb|EDU57449.1| hypothetical protein PROSTU_04692 [Providencia stuartii ATCC 25827]
          Length = 232

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 92/226 (40%), Positives = 128/226 (56%), Gaps = 17/226 (7%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  +D V  ++FDYGQR+++E+E    +   +     K  
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALKMYDEVHCVTFDYGQRHRLEIEVAQKLSHSLGAAAHKIL 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLVFAATLAYRL 126
           D      +  L  L   S +     V    +   N LP+TFVPGRNI+FL  AA  AY++
Sbjct: 62  D------VNLLNELAVSSLTRDNIPVPDYNESATNGLPSTFVPGRNILFLTLAAIYAYQV 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               ++ GVCETD+SGYPDCR + ++A+  A+NLG+   +   TPLMWL K +TW LA  
Sbjct: 116 QAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGLAKDIRFETPLMWLDKAQTWALADY 175

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
            G    +  I E++ TCY G +      G GC  C AC+LR KG  
Sbjct: 176 YGH---LETIREQTLTCYNGIQ------GDGCGECAACHLRSKGLN 212


>gi|91205311|ref|YP_537666.1| trans-regulatory protein ExsB [Rickettsia bellii RML369-C]
 gi|157826917|ref|YP_001495981.1| trans-regulatory protein ExsB [Rickettsia bellii OSU 85-389]
 gi|110816256|sp|Q1RJ87|QUEC_RICBR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|167016448|sp|A8GVR7|QUEC_RICB8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|91068855|gb|ABE04577.1| Trans-regulatory protein ExsB [Rickettsia bellii RML369-C]
 gi|157802221|gb|ABV78944.1| Trans-regulatory protein ExsB [Rickettsia bellii OSU 85-389]
          Length = 225

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 69/237 (29%), Positives = 108/237 (45%), Gaps = 25/237 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+T L+   ++   +  +SF+YGQRN  E        +K+ EL+ ++ 
Sbjct: 2   KKAVILVSGGADSATVLAIMREQGYEIHAISFNYGQRNNAE-------LRKVTELVKEYN 54

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT----FVPGRNIIFLVFAATLAY 124
               +   + L   G  + +     V        LP      +VP RN IFL +A   A 
Sbjct: 55  VKQHKIVNIDLRAFGGSALTDDDIKVPHYHDTKELPEDVPVTYVPARNTIFLSYALGFAE 114

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-HVTVHTPLMWLKKYETWKL 183
            +G  +I IGV  +D + YPDCR + I++ E   NL      VT+HTPL+ + K +  K 
Sbjct: 115 IIGAKDIFIGVHTSDSANYPDCRPEYIKSFEAMANLATNIGGVTIHTPLINMTKDQIIKT 174

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
              +G      +  + + +CY    D        C +C AC +R   +   K   QD
Sbjct: 175 GLRLG------VDYKNTISCYDPSEDDLS-----CGTCLACTIRLDAFK--KNNVQD 218


>gi|126208569|ref|YP_001053794.1| queuosine biosynthesis protein QueC [Actinobacillus
           pleuropneumoniae L20]
 gi|189038888|sp|A3N1A3|QUEC_ACTP2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|126097361|gb|ABN74189.1| queuosine biosynthesis protein QueC [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
          Length = 222

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 88/232 (37%), Positives = 137/232 (59%), Gaps = 23/232 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +   P A+++FSGGQDS+TCL  A+  F  + VE ++F YGQR+ +ELE    + K +  
Sbjct: 1   MNSTPKAVVIFSGGQDSTTCLFQAIQEFGVENVEVVTFQYGQRHAIELEKAAWIAKDLG- 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     +  ++  +++  I+ +++ +   +K Q+ N PNTFV GRN +FL++ A  
Sbjct: 60  ---------VKQTLIDTSVIKAITSNAMMEEHEIK-QEGNTPNTFVDGRNALFLLYTAIY 109

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A   GI  I  GVCETD+SGYPDCR   ++++   +NL M+ +  + TPLM+L K +TW 
Sbjct: 110 AKGQGIRTIFTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYNFNIRTPLMYLTKKQTWA 169

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           LA  +G     + I + +HTCYLG          GC++CP+C LR+KG  E+
Sbjct: 170 LADKLGAF---DYIRQHTHTCYLGVEG-------GCHTCPSCVLREKGLNEY 211


>gi|85375614|ref|YP_459676.1| exsB protein [Erythrobacter litoralis HTCC2594]
 gi|122543216|sp|Q2N612|QUEC_ERYLH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|84788697|gb|ABC64879.1| exsB protein [Erythrobacter litoralis HTCC2594]
          Length = 239

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 71/238 (29%), Positives = 107/238 (44%), Gaps = 29/238 (12%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               +A +L SGG DS    + A ++   V  L+ DYGQR+KVEL+    +  KI     
Sbjct: 4   NSRKAAAILLSGGLDSMVTAAIAQEQGYAVHALTIDYGQRHKVELQSARLIAAKIGA--- 60

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKI--QDNNLPNTFVPGRNIIFLVFAATLA 123
                  E H+   A L  +  S+LT ++ +      N++P T+VP RN++FL      A
Sbjct: 61  -------ERHVEIEADLRALGGSALTDDIDVPKCGVGNDIPVTYVPARNLVFLSLTTAFA 113

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME------SHVTVHTPLMWLKK 177
              G  +I IGV   DYSGYPDCR + I +     NL  +      +   +H PL  + K
Sbjct: 114 EASGARDIFIGVNALDYSGYPDCRPEFIESFAVTANLATKAGVEESAPFKIHAPLQHMTK 173

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            +  +    +G +         S +CY             C +C +C LR+KG+ E  
Sbjct: 174 ADIARECARLGLES------AWSWSCYDP-----LPGLKPCGACDSCRLRRKGFAEAG 220


>gi|332880678|ref|ZP_08448351.1| protein ExsB [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332681312|gb|EGJ54236.1| protein ExsB [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 231

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 87/236 (36%), Positives = 132/236 (55%), Gaps = 16/236 (6%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +     +AL++FSGGQDS+TCL WA   F +V  LSF YGQ++  E+E    +       
Sbjct: 1   MTMNKETALVVFSGGQDSTTCLFWAKKHFKKVVALSFVYGQKHVKEVELAKAIA------ 54

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
             +         +  +  LG  S +  T  +  +  + + PNTFVPGRN+ F+  AA  A
Sbjct: 55  -SRADVDWDCMDVSFVGSLGRNSLTDATMQMDEEKPEGHCPNTFVPGRNLFFISIAAVYA 113

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              GI +IV GV +TD+SGYPDCR   I+++   +NL M+    +HTPLMW+ K +TW L
Sbjct: 114 RERGINHIVTGVSQTDFSGYPDCRDAFIKSLNVTLNLAMDEQFVLHTPLMWIDKCQTWAL 173

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           A ++G   +++L+  ++ TCY G +      G GC  CPAC LR +G  ++  + +
Sbjct: 174 ADELG---VLDLVRHDTLTCYNGVQ------GDGCGHCPACKLRNEGLHKYLAEKE 220


>gi|332188916|ref|ZP_08390619.1| exsB family protein [Sphingomonas sp. S17]
 gi|332011056|gb|EGI53158.1| exsB family protein [Sphingomonas sp. S17]
          Length = 231

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 69/238 (28%), Positives = 99/238 (41%), Gaps = 24/238 (10%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +   AP A++L SGG DS    + A     R+  LS DY QR+KVEL     V   +   
Sbjct: 1   MTSSAPMAVVLVSGGLDSMISAASAKAAGYRILALSVDYNQRHKVELAAARRVAVALGAE 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                        L L+  G  + ++   +V        +P T+VP RN IFL  A   A
Sbjct: 61  RHIVLP-------LDLSAFGGSALTAD-IDVPKDGVQPGIPVTYVPARNTIFLSLALGWA 112

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKY 178
              G  ++ IGV   DYSGYPDCR + + A E    +  +         +H PL  + K 
Sbjct: 113 EAAGARDLFIGVNALDYSGYPDCRPEFVAAFEGLAEIATKAGVEGQPFKIHAPLQHMTKA 172

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           +  +    +G      + +  S +CY          G  C  C +C LR KG+ E   
Sbjct: 173 DIVREGTRLG------VDMGLSWSCYDP-----APGGLHCGRCDSCRLRSKGFEEAGI 219


>gi|58581302|ref|YP_200318.1| transcriptional regulator [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84623226|ref|YP_450598.1| transcriptional regulator [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188577420|ref|YP_001914349.1| ExsB protein [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|325929353|ref|ZP_08190483.1| transcriptional regulator;preQ(0) biosynthesis protein QueC
           [Xanthomonas perforans 91-118]
 gi|75435924|sp|Q5H288|QUEC_XANOR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|110816278|sp|Q2P553|QUEC_XANOM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764392|sp|B2STI7|QUEC_XANOP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|58425896|gb|AAW74933.1| transcriptional regulator [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84367166|dbj|BAE68324.1| transcriptional regulator [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188521872|gb|ACD59817.1| ExsB protein [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|325540265|gb|EGD11877.1| transcriptional regulator;preQ(0) biosynthesis protein QueC
           [Xanthomonas perforans 91-118]
          Length = 224

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 68/232 (29%), Positives = 101/232 (43%), Gaps = 25/232 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+  ++ A ++   V  LS  YGQR+  EL+    V      +  K  
Sbjct: 2   KKAVVLLSGGMDSAAVIALAQEQGFAVYALSVRYGQRHTSELDAAARVAAAQGVVAHKVV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D       + L  +G  + +            + +P T+VP RN I L  A   A  +G 
Sbjct: 62  D-------VDLRSIGGSALTDDIDVPDAG--GDGIPVTYVPARNTIMLSLALGWAEVVGA 112

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKL 183
            ++  GV   DYSGYPDCR + +RA E   NL  ++ V      VH PL +L K +  + 
Sbjct: 113 NDLFCGVNAVDYSGYPDCRPEFVRAFEVLANLATKAGVEGAGLRVHAPLQFLSKADIVRE 172

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
              +G      +    + +CY    D     G  C  C AC LR  G+ +  
Sbjct: 173 GVRLG------VDFGLTVSCYRADAD-----GRACGHCDACRLRAAGFADAG 213


>gi|313894914|ref|ZP_07828474.1| protein ExsB [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312976595|gb|EFR42050.1| protein ExsB [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 228

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 68/238 (28%), Positives = 106/238 (44%), Gaps = 27/238 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS TC++ A +    +  +SF YGQR   E++C   +          
Sbjct: 1   MREKAVILLSGGLDSCTCMAVAQEAGCELYPVSFVYGQRYDREVDCAKRIAAHFHAAEHL 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL-PNTFVPGRNIIFLVFAATLAYR 125
             ++        +  +G  + +  + +V     D    P T+VP RN+IFL +    A R
Sbjct: 61  IIET-------NMDAIGGSAVTDRSIDVPEGDPDRTDIPLTYVPARNLIFLSYGLGFAER 113

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME------SHVTVHTPLMWLKKYE 179
           +G  ++ IGV   DYSGYPDCR + IR  + A ++           + V TPL +L K E
Sbjct: 114 VGAAHLYIGVNSVDYSGYPDCRPEFIRQFQAAADMATAAATERGKRIVVETPLQYLSKGE 173

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
              L   +G         E + +CY G  +        C  C +C LR +G+ E   +
Sbjct: 174 IIALGTRLGA------PYELTTSCYNGGTE-------ACGVCDSCRLRLRGFAEAGRR 218


>gi|189029594|sp|Q0I671|QUEC_SYNS3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
          Length = 226

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 70/230 (30%), Positives = 110/230 (47%), Gaps = 20/230 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           +A+ L SGG DS+T  + A+    RV  LSFDYGQR++ EL+  + + K +         
Sbjct: 5   TAIALLSGGLDSATAAALAIKSGFRVIGLSFDYGQRHRRELDAAVEIAKAL--------- 55

Query: 70  SLGEDHIL--PLAILGDISHSSLTKNVAMKIQDNN-LPNTFVPGRNIIFLVFAATLAYRL 126
           +L E H +   LA+ G  S +   + +     + + +PNT+VPGRN +F+    +LA   
Sbjct: 56  NLAEHHTINVDLAMWGGSSLTDHAQTLPTSGVETSIIPNTYVPGRNTVFIAIGLSLAEAR 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   +V+GV   DYSGYPDCR D + A +   +L   +    H P +W    E W   Q 
Sbjct: 116 GADRLVLGVNAVDYSGYPDCRPDYLEAFQDLADLSSRAGREGHGPKLWAPLVE-WSKQQI 174

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
                 + + +E + +CY G           C  C +C +R +  +    
Sbjct: 175 AEEALHLGIPIERTWSCYSGGDVP-------CGVCDSCRIRDEALLAAGR 217


>gi|159904365|ref|YP_001551709.1| PP-loop superfamily ATPase [Prochlorococcus marinus str. MIT 9211]
 gi|159889541|gb|ABX09755.1| Predicted PP-loop superfamily ATPase [Prochlorococcus marinus str.
           MIT 9211]
          Length = 229

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 71/237 (29%), Positives = 115/237 (48%), Gaps = 26/237 (10%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
              P ++ L SGG DS+T  + AL+    V  +SFDYGQR+K ELE  + +   +  L  
Sbjct: 4   NNKPISIALLSGGLDSATATAMALEAGHNVIGISFDYGQRHKRELEAAIELAAHLNLLGH 63

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAY 124
           +  +       + LA  G  S + L ++V  + I    +PNT+VPGRN +F+    +LA 
Sbjct: 64  EIIN-------VNLAKWGGSSLTDLQQSVPTQGIIKGKIPNTYVPGRNTVFIAIGLSLAE 116

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYE 179
             G   IV+G+   DYSGYPDCR D +++ +   NL  +     +   +  PL+ L K E
Sbjct: 117 AKGANQIVLGINAMDYSGYPDCRPDYLKSFQALANLASKAGREGNAPKLWAPLIHLNKVE 176

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
             + A  +      N+ ++++ +CY G           C  C +C +R +   +   
Sbjct: 177 IIQEALRL------NIPIDKTWSCYNGLEKP-------CGLCDSCRIRNEALEKAGR 220


>gi|17232587|ref|NP_489135.1| hypothetical protein alr5095 [Nostoc sp. PCC 7120]
 gi|81769494|sp|Q8YM45|QUEC_ANASP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|17134233|dbj|BAB76794.1| alr5095 [Nostoc sp. PCC 7120]
          Length = 229

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 69/235 (29%), Positives = 102/235 (43%), Gaps = 29/235 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DSST L  A        ++SFDY QR++ EL     V +    +  +  +
Sbjct: 2   KAVILLSGGLDSSTILYQAKADGCECYSISFDYQQRHRRELHSAFLVAQTAGIVQHQVIN 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKI----QDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    L + G  + +    ++  +        N+P T+VP RN IFL FA   A  
Sbjct: 62  -------FDLRLWGGSALTDDNIDLPQERSLDAMSQNIPVTYVPARNTIFLSFALAYAEA 114

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYET 180
           +    + IGV   DYSGYPDCR D I A++    LG +       + +  PL+ LKK E 
Sbjct: 115 IAAQRVYIGVNALDYSGYPDCRPDYIEAMQEVFRLGTKQGREGQPINIVAPLINLKKTEI 174

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            +L   +G      +    + +CY G           C  C +C LR   + E  
Sbjct: 175 IQLGNQLG------VPWNLTWSCYAGGD-------VACGVCDSCRLRLAAFAELG 216


>gi|320530194|ref|ZP_08031264.1| ExsB protein [Selenomonas artemidis F0399]
 gi|320137627|gb|EFW29539.1| ExsB protein [Selenomonas artemidis F0399]
          Length = 228

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 67/238 (28%), Positives = 105/238 (44%), Gaps = 27/238 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS TC++ A +    +  +SF YGQR   E++C   +          
Sbjct: 1   MREKAVILLSGGLDSCTCMAVAQEAGCELYPVSFVYGQRYDREVDCAKRIAAHFHAAEHL 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL-PNTFVPGRNIIFLVFAATLAYR 125
             ++        +  +G  + +  + +V     D    P T+VP RN+IFL +    A R
Sbjct: 61  IIET-------NMDAIGGSAVTDRSIDVPEGDPDRTDIPLTYVPARNLIFLSYGLGFAER 113

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME------SHVTVHTPLMWLKKYE 179
           +G  ++ IGV   DYSGYPDCR + IR  +   ++           + V TPL +L K E
Sbjct: 114 VGAAHLYIGVNSVDYSGYPDCRPEFIRQFQAVADMATAAATERGKRIVVETPLQYLSKGE 173

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
              L   +G         E + +CY G  +        C  C +C LR +G+ E   +
Sbjct: 174 IIALGTRLGA------PYEMTTSCYNGGTE-------ACGVCDSCRLRLRGFAEAGRR 218


>gi|90408081|ref|ZP_01216252.1| Predicted PP-loop superfamily ATPase [Psychromonas sp. CNPT3]
 gi|90310838|gb|EAS38952.1| Predicted PP-loop superfamily ATPase [Psychromonas sp. CNPT3]
          Length = 230

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 28/233 (12%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K     ++++SGG DS T L  AL+       L+FDYGQR+  E+     V   +     
Sbjct: 9   KMKKKVVVIYSGGMDSYTVLHKALEEGLVPFALTFDYGQRHIKEISVARDVCLSLN---- 64

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAA 120
                  +  I+ ++ + ++   S   + ++     + ++NN+ NT VP RN+I L  A 
Sbjct: 65  ------VDHKIIDISSINELIGGSSLTDSSIEVSSGEYENNNMINTVVPNRNMILLSMAI 118

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
             A  +G   +  G    D+  YPDCR   +  +     +     V++++P +   K   
Sbjct: 119 GYAVSIGAEKVYYGAHSGDHEIYPDCRPIFVEKMNAVAEVANYEKVSIYSPYLNSDKIGI 178

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
            K    +G      L   ++ TCY G+          C  C +C  R + + +
Sbjct: 179 LKDGLRMG------LDYSKTWTCYNGREKS-------CGVCASCIERLEAFSK 218


>gi|109947331|ref|YP_664559.1| hypothetical protein Hac_0767 [Helicobacter acinonychis str.
           Sheeba]
 gi|123173443|sp|Q17XR6|QUEC_HELAH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|109714552|emb|CAJ99560.1| conserved hypothetical protein [Helicobacter acinonychis str.
           Sheeba]
          Length = 225

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 89/228 (39%), Positives = 139/228 (60%), Gaps = 8/228 (3%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            ++ FSGGQDS+T   WA  RF +V  + FDY Q++ VELEC   +   +     K    
Sbjct: 6   CVISFSGGQDSTTLAIWAAKRFKKVYLVGFDYAQKHSVELECAQKIASLL-----KLPYE 60

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           + +   L       +  +S        +Q+ +LPN+FVP RN IF+    + A +LG  N
Sbjct: 61  IIQLDFLENITHSALFKNSNDLIGHSHVQNKDLPNSFVPNRNAIFITLLHSYAQKLGANN 120

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           I +GV + D+SGYPDC+ D I++IE A+NLG  + + + TPLM+L K + +++A+D+G  
Sbjct: 121 IALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTTIKIVTPLMFLSKAQEFQMAKDLGA- 179

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
             ++LI++E+HTCY G+R   + +GYGC  C AC LR+KG+ EF+ ++
Sbjct: 180 --LDLIIKETHTCYQGERKILHAYGYGCGECLACQLRKKGYEEFQARF 225


>gi|52425910|ref|YP_089047.1| hypothetical protein MS1855 [Mannheimia succiniciproducens MBEL55E]
 gi|52307962|gb|AAU38462.1| unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 251

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 86/232 (37%), Positives = 138/232 (59%), Gaps = 22/232 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            A+++FSGGQDS+TCL  A+  +  + VE ++F YGQR+ +ELE    + + +       
Sbjct: 40  KAVVIFSGGQDSTTCLLKAIADYGVENVEAVTFQYGQRHAIELEKAKWIAQDLG------ 93

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                +  ++  +++  I+ +++  N+ +   +  +PNTFV GRN +FL++ A  A   G
Sbjct: 94  ----IKQTLIDTSVIKTITANAMMDNIKITKDEAGMPNTFVDGRNALFLLYTAIYAKGQG 149

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I +I+ GVCETD+SGYPDCR   I+++   +NL M+    +HTPLM+L K +TW+LA ++
Sbjct: 150 IRDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIHTPLMYLTKAQTWQLADEL 209

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           G    +N + E +HTCYLG          GC SCP+C LR+ G  ++    Q
Sbjct: 210 GA---LNYVREHTHTCYLGVEG-------GCGSCPSCILRENGLQQYLASKQ 251


>gi|145635040|ref|ZP_01790746.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
           PittAA]
 gi|229844854|ref|ZP_04464992.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
           6P18H1]
 gi|145267648|gb|EDK07646.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
           PittAA]
 gi|229812235|gb|EEP47926.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
           6P18H1]
 gi|309973345|gb|ADO96546.1| Probable 7-cyano-7-deazaguanine (preQ0) synthesis protein QueC
           [Haemophilus influenzae R2846]
          Length = 227

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 87/231 (37%), Positives = 140/231 (60%), Gaps = 23/231 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            A+++FSGGQDS+TCL  A+  +  + VE ++F YGQR+ +ELE    + + +       
Sbjct: 11  KAIVIFSGGQDSTTCLFQAIAEYGKENVEAITFQYGQRHAIELEKARAITQDLG------ 64

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                +  ++  +++  I+H++L    A ++ ++N LPNTFV GRN +FL++AA  A   
Sbjct: 65  ----IKQTLIDTSVIKAITHNALMDEQAHIEQKENELPNTFVDGRNALFLLYAAIYAKGQ 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI +I+ GVCETD+SGYPDCR   I+++   +NL M+    + TPLM+L K +TW+LA +
Sbjct: 121 GIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLADE 180

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +G   +++ I + +HTCY G          GC  CP+C LR KG  ++  +
Sbjct: 181 LG---VLDYIQKHTHTCYEGIEG-------GCGKCPSCILRNKGLKKYLTQ 221


>gi|332828637|gb|EGK01333.1| 7-cyano-7-deazaguanine synthase [Dysgonomonas gadei ATCC BAA-286]
          Length = 221

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 94/232 (40%), Positives = 130/232 (56%), Gaps = 21/232 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K   AL+LFSGGQDS+TCL WA++ F  V TL F YGQR+  E+E    +        
Sbjct: 1   MNKKEPALVLFSGGQDSTTCLYWAIENFSSVRTLCFTYGQRHSKEVEVAQSIAGHAG--- 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNV--AMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                      +L  +I+  +S +SLT ++    +   ++ PNTFVPGRN++FL FAA +
Sbjct: 58  -------VPFQLLDASIISQLSVNSLTSDIVMDQEKPADSYPNTFVPGRNLLFLTFAAVI 110

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A   GI +IV GV E DYSGYPDCR   I +   +INL M+ H  +HTPLMW  K   W+
Sbjct: 111 ARSHGIRHIVTGVSEADYSGYPDCRDTFILSANASINLAMDEHFQIHTPLMWRDKTAVWQ 170

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           LA  +G     +++  ++ TCY G          GC  CPAC LR++G   +
Sbjct: 171 LADQLGVF---DVVRTQTLTCYNGI------IADGCGHCPACKLRKQGLENY 213


>gi|57169010|ref|ZP_00368138.1| exsB protein [Campylobacter coli RM2228]
 gi|57236928|ref|YP_178043.1| ExsB [Campylobacter jejuni RM1221]
 gi|86150544|ref|ZP_01068768.1| exsB protein [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|86152354|ref|ZP_01070564.1| exsB protein [Campylobacter jejuni subsp. jejuni 260.94]
 gi|86153997|ref|ZP_01072199.1| exsB protein [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|218561709|ref|YP_002343488.1| putative transcriptional regulatory protein [Campylobacter jejuni
           subsp. jejuni NCTC 11168]
 gi|305432554|ref|ZP_07401715.1| transcription regulator ExsB [Campylobacter coli JV20]
 gi|315123629|ref|YP_004065633.1| putative transcriptional regulatory protein [Campylobacter jejuni
           subsp. jejuni ICDCCJ07001]
 gi|81354271|sp|Q5HXE2|QUEC_CAMJR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|166218759|sp|P0C634|QUEC_CAMJE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|57019555|gb|EAL56245.1| exsB protein [Campylobacter coli RM2228]
 gi|57165732|gb|AAW34511.1| ExsB [Campylobacter jejuni RM1221]
 gi|85838996|gb|EAQ56261.1| exsB protein [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|85840651|gb|EAQ57903.1| exsB protein [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85842535|gb|EAQ59748.1| exsB protein [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|112359415|emb|CAL34197.1| putative transcriptional regulatory protein [Campylobacter jejuni
           subsp. jejuni NCTC 11168]
 gi|284925319|gb|ADC27671.1| ExsB [Campylobacter jejuni subsp. jejuni IA3902]
 gi|304444265|gb|EFM36917.1| transcription regulator ExsB [Campylobacter coli JV20]
 gi|307746979|gb|ADN90249.1| Queuosine biosynthesis protein queC [Campylobacter jejuni subsp.
           jejuni M1]
 gi|315017351|gb|ADT65444.1| putative transcriptional regulatory protein [Campylobacter jejuni
           subsp. jejuni ICDCCJ07001]
 gi|315057457|gb|ADT71786.1| Queuosine Biosynthesis QueC ATPase [Campylobacter jejuni subsp.
           jejuni S3]
 gi|315929942|gb|EFV09099.1| Transcriptional regulator ExsB [Campylobacter jejuni subsp. jejuni
           305]
          Length = 224

 Score =  156 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 69/239 (28%), Positives = 105/239 (43%), Gaps = 22/239 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +  AL + SGG DS+ C   A      +  L FDY QR +   E      K+I + +  
Sbjct: 1   MSKKALCIISGGMDSTLCAYLAKKEGYEIIALHFDYEQRTQ---EKEKECFKQICKALKV 57

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            K  + +   +       ++  S+          +  P T+VP RN IFL  A +LA + 
Sbjct: 58  EKSYILDVSFIKDIGGNALTDKSIDIPKNELCTSDTPPITYVPFRNGIFLSIAGSLAEKE 117

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG--MESHVTVHTPLMWLKKYETWKLA 184
              +I IGV E D SGYPDC  + I+  +  IN G      V + TPL+ L K +  +LA
Sbjct: 118 NCESIFIGVVEEDGSGYPDCTDEFIQKAQEFINEGTSKNFKVCIKTPLVRLNKAKIVELA 177

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQ 239
                    N+ LE + +CY  + +        C  C +C LR +G+ +       KY+
Sbjct: 178 LK------ENVPLELTWSCYESEDE-------ACGECDSCLLRLRGFEKAGFKDKIKYK 223


>gi|75908579|ref|YP_322875.1| ExsB protein [Anabaena variabilis ATCC 29413]
 gi|110816209|sp|Q3MAK6|QUEC_ANAVT RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|75702304|gb|ABA21980.1| preQ(0) biosynthesis protein QueC [Anabaena variabilis ATCC 29413]
          Length = 227

 Score =  156 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 68/235 (28%), Positives = 101/235 (42%), Gaps = 29/235 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DSST L  A        ++SFDY QR++ EL     V +    +  +  +
Sbjct: 2   KAVILLSGGLDSSTILYQAKADGCECYSISFDYQQRHRRELHSAFLVAQTAGIVQHQVVN 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKI----QDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    L + G  + +    ++  +        N+P T+VP RN IFL FA   A  
Sbjct: 62  -------FDLRLWGGSALTDDKIDLPQERSVDAMSQNIPVTYVPARNTIFLSFALAYAEA 114

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYET 180
           +    + IGV   DYSGYPDCR D I A++    LG +       + +  PL+ LKK   
Sbjct: 115 IAAERVYIGVNALDYSGYPDCRPDYIEAMQEVFRLGTKQGREGQPINIVAPLINLKKTAI 174

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            +L   +G      +    + +CY G           C  C +C LR   + E  
Sbjct: 175 IQLGNQLG------VPWNLTWSCYNGGD-------VACGVCDSCRLRLAAFAELG 216


>gi|332140738|ref|YP_004426476.1| putative regulator protein [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|254764297|sp|B4RTX3|QUEC_ALTMD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|327550760|gb|AEA97478.1| putative regulator protein [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 218

 Score =  156 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 94/230 (40%), Gaps = 19/230 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            + + ++++SGG DS T L  AL    +V  LSFDYGQR+K EL+    V   +      
Sbjct: 1   MSENVVVIYSGGMDSFTVLHKALRAGKKVHALSFDYGQRHKKELDYAAAVCTSLGVPHKI 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              S          ++G  + +S         ++ ++  T VP RN+I L  A   A  L
Sbjct: 61  VDISAIN------TLIGGSALTSDIDVPEGHYEEPSMKQTVVPNRNMILLSLAVGYAVSL 114

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G    D++ YPDCR + +  +     +   + VT+ TP +   K         
Sbjct: 115 DANEVYYGAHSGDHAIYPDCRPEFVHKMNDVCGIANYTPVTIMTPYIKDSKTAILTDGLS 174

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           +G      L   ++ TCY G+          C  C AC  R + + +   
Sbjct: 175 MG------LDYGQTWTCYNGREK-------ACGKCGACEERLEAFKDNGA 211


>gi|145641208|ref|ZP_01796788.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae R3021]
 gi|260582121|ref|ZP_05849915.1| queuosine biosynthesis protein queC [Haemophilus influenzae NT127]
 gi|145274045|gb|EDK13911.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
           22.4-21]
 gi|260094753|gb|EEW78647.1| queuosine biosynthesis protein queC [Haemophilus influenzae NT127]
          Length = 227

 Score =  156 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 85/231 (36%), Positives = 140/231 (60%), Gaps = 23/231 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            A+++FSGGQDS+TCL  A+  +  + +E ++F YGQR+ +ELE    + + +       
Sbjct: 11  KAIVIFSGGQDSTTCLFQAIAEYGKENIEAITFQYGQRHAIELEKARAIAQDLG------ 64

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                +  ++  +++  I+H++L    A ++ ++N LPNTFV GRN +FL++AA  A   
Sbjct: 65  ----IKQTLIDTSVMKAITHNALMDEQAHIEQKENELPNTFVDGRNALFLLYAAIYAKGQ 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI +I+ GVCETD+SGYPDCR   I+++   +NL M+    + TPLM+L K +TW+LA +
Sbjct: 121 GIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLADE 180

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +G   +++ + + +HTCY G          GC  CP+C LR KG  ++  +
Sbjct: 181 LG---VLDYVQKHTHTCYEGIEG-------GCGKCPSCILRNKGLKKYLTQ 221


>gi|312792427|ref|YP_004025350.1| exsb protein [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312179567|gb|ADQ39737.1| exsB protein [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 217

 Score =  156 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 54/229 (23%), Positives = 96/229 (41%), Gaps = 27/229 (11%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           ++ SGG DS+T L     +   V  +SF YGQ++  ELE      K +            
Sbjct: 1   MVLSGGVDSTTLLYDVKSQGYEVFAISFLYGQKHSKELEFAKKTCKLLS----------V 50

Query: 73  EDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              I+ ++   +++ S+LT            D+ +  T VP RN++ L  +A  A  LG 
Sbjct: 51  PHKIVDISFFAELAPSALTTPDWNVPEGYYTDSTMKQTVVPNRNMVLLSISAAYAISLGA 110

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G    D+  YPDCR + + A++ A+ L     + +  P + +KK +  +   ++G
Sbjct: 111 KKLFYGAHAGDHPIYPDCRKEFVEAMKNALYLADYIGLELEAPYVDMKKEDILRRGLELG 170

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                 +    + +CY G +         C  C  C  R + + +   K
Sbjct: 171 ------VDYSLTWSCYKGGQK-------ACGRCGTCTERIEAFKKVGMK 206


>gi|261346357|ref|ZP_05974001.1| ExsB protein [Providencia rustigianii DSM 4541]
 gi|282565671|gb|EFB71206.1| ExsB protein [Providencia rustigianii DSM 4541]
          Length = 231

 Score =  156 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 89/233 (38%), Positives = 131/233 (56%), Gaps = 17/233 (7%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  +D V  ++FDYGQR+++E+E    +  ++     K  
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALKHYDEVHCITFDYGQRHRLEIEVAQKLSLQLGAKAHKVL 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDN--NLPNTFVPGRNIIFLVFAATLAYRL 126
           D      +  L+ L   S +     V    +     LP+TFVPGRNI+FL  AA  AY++
Sbjct: 62  D------VTLLSELAISSLTRDNIPVPDFKESEASGLPSTFVPGRNILFLTLAAIYAYQV 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               ++ GVCETD+SGYPDCR + ++++  A++LG+   +   TPLMWL K +TW LA  
Sbjct: 116 QAEAVITGVCETDFSGYPDCRDEFVKSLNHAVSLGLAKDIRFETPLMWLDKAQTWALADH 175

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
            G    +  I +++ TCY G +      G GC  C AC+LR KG   +    Q
Sbjct: 176 YGH---LETIRQQTLTCYNGIQ------GDGCGECAACHLRSKGLNYYLSNKQ 219


>gi|283778827|ref|YP_003369582.1| exsB protein [Pirellula staleyi DSM 6068]
 gi|283437280|gb|ADB15722.1| exsB protein [Pirellula staleyi DSM 6068]
          Length = 229

 Score =  156 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 89/226 (39%), Gaps = 18/226 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + +FSGG DS+      L   D V  LS DYGQR++ EL       KK          
Sbjct: 2   KTVAIFSGGLDSTVLAHELLAAGDEVLLLSIDYGQRHRKELVFAENFAKKQG-----LVW 56

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            L +   +   + G+   SS          + N+  T VP RN+I L  A   A      
Sbjct: 57  KLADLKSIAGLLGGNSQTSSAVAVPHGHYAEENMKLTVVPNRNMIMLAVAGGWAVSEKAD 116

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +  G    D++ YPDCR + +RA+  A+ L     + + TP +   K +  +   ++G 
Sbjct: 117 RLAYGAHAGDHTIYPDCRPEFVRAMAAALELCDWHKLAMFTPFVSRSKADIVRRGAELG- 175

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
                +    + +CY G           C  C  CY R++ +    
Sbjct: 176 -----VDFAATWSCYEGGE-------IHCGQCGTCYERREAFERAG 209


>gi|254457915|ref|ZP_05071342.1| exsB protein [Campylobacterales bacterium GD 1]
 gi|207085308|gb|EDZ62593.1| exsB protein [Campylobacterales bacterium GD 1]
          Length = 224

 Score =  156 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 73/238 (30%), Positives = 112/238 (47%), Gaps = 28/238 (11%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVE 62
           + ++   AL + SGG DS+       +    +  L F+Y QR  K ELEC   + + +  
Sbjct: 1   MNEQNKKALCVMSGGMDSTLSAYMMKNSGYEIIALHFNYNQRTQKKELECFHKICEDL-- 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                   + E +IL L     I  S+LT     V +   +  +P T+VP RN IFL  A
Sbjct: 59  -------DVKEKYILDLDFFAQIGASALTDKSIEVPIGGIEEGVPVTYVPFRNGIFLSMA 111

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKK 177
           A +A + G   I IGV E D SGYPDCR   I ++E +INLG +   ++ +  PL+ LKK
Sbjct: 112 AAVAEKEGANVISIGVVEEDSSGYPDCRESYINSMEQSINLGTKDETNIEIKMPLVHLKK 171

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            +  + + ++      N+ L  + +CY  +          C  C +C LR  G+    
Sbjct: 172 SQIVQKSLEL------NVPLSLTWSCYKNEDK-------ACGVCDSCRLRLNGFKLAG 216


>gi|78048824|ref|YP_364999.1| ExsB family transcriptional regulator [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|110816277|sp|Q3BQG4|QUEC_XANC5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|78037254|emb|CAJ24999.1| putative transcriptional regulator, ExsB family [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
          Length = 224

 Score =  156 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 68/232 (29%), Positives = 101/232 (43%), Gaps = 25/232 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+  ++ A ++   V  LS  YGQR+  EL+    V      +  K  
Sbjct: 2   KKAVVLLSGGMDSAAVIALAQEQGFAVYALSVRYGQRHTSELDAAARVAAAQGVVAHKVV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D       + L  +G  + +            + +P T+VP RN I L  A   A  +G 
Sbjct: 62  D-------VDLRSIGGSALTDDIDVPDAG--GDGIPVTYVPARNTIMLSLALGWAEVVGA 112

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKL 183
            ++  GV   DYSGYPDCR + +RA E   NL  ++ V      VH PL +L K +  + 
Sbjct: 113 NDLFCGVNAVDYSGYPDCRPEFVRAFEVLANLATKAGVEGVGLRVHAPLQFLSKADIVRE 172

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
              +G      +    + +CY    D     G  C  C AC LR  G+ +  
Sbjct: 173 GVRLG------VDFGLTVSCYRADAD-----GRACGHCDACRLRAAGFSDAG 213


>gi|319776566|ref|YP_004139054.1| PP-loop superfamily ATPase [Haemophilus influenzae F3047]
 gi|329124078|ref|ZP_08252625.1| transcription regulator ExsB [Haemophilus aegyptius ATCC 11116]
 gi|317451157|emb|CBY87390.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae F3047]
 gi|327467503|gb|EGF13001.1| transcription regulator ExsB [Haemophilus aegyptius ATCC 11116]
          Length = 227

 Score =  156 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 85/231 (36%), Positives = 140/231 (60%), Gaps = 23/231 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            A+++FSGGQDS+TCL  A+  +  + VE ++F YGQR+ +ELE    + + +       
Sbjct: 11  KAIVIFSGGQDSTTCLFQAIAEYGKENVEAITFQYGQRHAIELEKARSIAQDLG------ 64

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                +  ++  +++  I+H++L    A ++ +++ LPNTFV GRN +FL++AA  A   
Sbjct: 65  ----IKQTLIDTSVMKAITHNALMDEQAHIEQKESELPNTFVDGRNALFLLYAAIYAKGQ 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI +I+ GVCETD+SGYPDCR   I+++   +NL M+    + TPLM+L K +TW+LA +
Sbjct: 121 GIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLADE 180

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +G   +++ + + +HTCY G          GC  CP+C LR KG  ++  +
Sbjct: 181 LG---VLDYVQKHTHTCYEGIEG-------GCGKCPSCILRNKGLKKYLTQ 221


>gi|148554324|ref|YP_001261906.1| exsB protein [Sphingomonas wittichii RW1]
 gi|189029534|sp|A5V652|QUEC_SPHWW RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|148499514|gb|ABQ67768.1| exsB protein [Sphingomonas wittichii RW1]
          Length = 230

 Score =  156 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 72/243 (29%), Positives = 106/243 (43%), Gaps = 29/243 (11%)

Query: 1   MNDIIKKA-PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           M+D   +    A++L SGG DS      A ++   +  L+ DY QR++VELE    V   
Sbjct: 1   MSDNANREGRRAIVLLSGGLDSMVSGGIAREQGFALAALTIDYNQRHRVELEAAKRVAAA 60

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD--NNLPNTFVPGRNIIFLV 117
           +            + H+     L     SSLT ++ +        +P+T+VP RN IFL 
Sbjct: 61  LG----------VDRHVTLPLNLRAFGGSSLTDDIDVPKDGVMPGIPSTYVPARNTIFLS 110

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPL 172
            A   A   G  +I +GV   DYSGYPDCR + I A +   +L  +  V      +H PL
Sbjct: 111 LALGFAEATGARDIFLGVNALDYSGYPDCRPEFIAAFQHLADLATKMGVEGQGFTIHAPL 170

Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
             + K +  + A  +G      L    S +CY          G  C  C +C LR KG+ 
Sbjct: 171 QHMTKADIAQEAARLG------LDAGMSWSCYDP-----TPDGKHCGLCDSCRLRSKGFA 219

Query: 233 EFK 235
           +  
Sbjct: 220 DAG 222


>gi|146329947|ref|YP_001210255.1| BcepGomrgp35 [Burkholderia phage BcepGomr]
 gi|145321123|gb|ABP63606.1| BcepGomrgp35 [Burkholderia phage BcepGomr]
          Length = 301

 Score =  156 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 88/248 (35%), Positives = 135/248 (54%), Gaps = 28/248 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             +A+++FSGGQDS+T L  A+    RV  ++F YGQ++ +ELE    +           
Sbjct: 3   KKTAVIVFSGGQDSTTILGKAIAEGYRVFPIAFTYGQKHAIELEQAAKIVDHFG------ 56

Query: 68  KDSLGEDHILPLAILGDISHSSLT----KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              L    I+ L+ LG+++ S+L             + +LP +FVP RN  FL  A   A
Sbjct: 57  ---LAGLKIVDLSALGEVTTSALIGTDGDVNKPSDANPSLPASFVPNRNAAFLTLAHAYA 113

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            ++G   +  GVC TDYSGYPDCR   I A+   +N+G ++ +T+ TPLM++ K ET+++
Sbjct: 114 QQVGADELWTGVCMTDYSGYPDCRDSFINALAATLNIGYDTSITIKTPLMYIDKAETFRM 173

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRY------------EWGYGCNSCPACYLRQKGW 231
           A+  G    +++++E SHTCY G R                +WG+GC  CPAC LR  GW
Sbjct: 174 AELAGC---LDVVIEMSHTCYNGVRSNGEVPTNPSEGGGFFDWGHGCGECPACKLRAGGW 230

Query: 232 MEFKEKYQ 239
            E+  +Y+
Sbjct: 231 REYLRRYR 238


>gi|145633079|ref|ZP_01788811.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae 3655]
 gi|144986305|gb|EDJ92884.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae 3655]
          Length = 227

 Score =  156 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 87/231 (37%), Positives = 140/231 (60%), Gaps = 23/231 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            A+++FSGGQDS+TCL  A+  +  + VE ++F YGQR+ +ELE    + + +       
Sbjct: 11  KAIVIFSGGQDSTTCLFQAIAEYGKENVEAITFQYGQRHAIELEKARAITQDLG------ 64

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                +  ++  +++  I+H++L    A ++ ++N LPNTFV GRN +FL++AA  A   
Sbjct: 65  ----IKQTLIDTSVMKAITHNALMDEQAHIEQKENELPNTFVDGRNALFLLYAAIYAKGQ 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI +I+ GVCETD+SGYPDCR   I+++   +NL M+    + TPLM+L K +TW+LA +
Sbjct: 121 GIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLADE 180

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +G   +++ I + +HTCY G          GC  CP+C LR KG  ++  +
Sbjct: 181 LG---VLDYIQKHTHTCYEGIEG-------GCGKCPSCILRNKGLKKYLTQ 221


>gi|88597669|ref|ZP_01100902.1| exsB protein [Campylobacter jejuni subsp. jejuni 84-25]
 gi|88189973|gb|EAQ93949.1| exsB protein [Campylobacter jejuni subsp. jejuni 84-25]
 gi|315928446|gb|EFV07758.1| thiamine biosynthesis family protein [Campylobacter jejuni subsp.
           jejuni DFVF1099]
          Length = 224

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 68/239 (28%), Positives = 105/239 (43%), Gaps = 22/239 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +  AL + SGG DS+ C   A      +  L FDY QR +   E      K+I + +  
Sbjct: 1   MSKKALCIISGGMDSTLCAYLAKKEGYEIIALHFDYEQRTQ---EKEKECFKQICKALKV 57

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            K  + +   +       ++  S+          +  P T+VP RN IFL  A +LA + 
Sbjct: 58  EKSYILDVSFIKDIGGNALTDKSIDIPKNELCTSDTPPITYVPFRNGIFLSIAGSLAEKE 117

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG--MESHVTVHTPLMWLKKYETWKLA 184
              ++ IGV E D SGYPDC  + I+  +  IN G      V + TPL+ L K +  +LA
Sbjct: 118 NCESVFIGVVEEDGSGYPDCTDEFIQKAQEFINEGTSKNFKVCIKTPLVRLNKAKIVELA 177

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQ 239
                    N+ LE + +CY  + +        C  C +C LR +G+ +       KY+
Sbjct: 178 LK------ENVPLELTWSCYESEDE-------ACGECDSCLLRLRGFEKAGFKDKIKYK 223


>gi|118474384|ref|YP_891314.1| ExsB protein [Campylobacter fetus subsp. fetus 82-40]
 gi|261886302|ref|ZP_06010341.1| ExsB protein [Campylobacter fetus subsp. venerealis str. Azul-94]
 gi|189038902|sp|A0RM81|QUEC_CAMFF RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|118413610|gb|ABK82030.1| ExsB protein [Campylobacter fetus subsp. fetus 82-40]
          Length = 223

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 75/233 (32%), Positives = 108/233 (46%), Gaps = 21/233 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVEL 63
           +     A+ + SGG DS+     A +    +  L FDY QR    E EC   +   +   
Sbjct: 1   MVNLKKAVCVISGGMDSALAAYKAKNSGYEIVALHFDYNQRTMNKERECFNLICDDLDVE 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                D      +  +A +G  + +  T N+       N+P T+VP RN IFL  AA LA
Sbjct: 61  KRFILD------VGFIAQIGGNALTDKTLNIPKDGISENIPITYVPFRNGIFLSIAAALA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-ESHVTVHTPLMWLKKYETWK 182
            + G   I IGV E D SGYPDC    I +I  AINLG  ++++ + TPL+ L K +  K
Sbjct: 115 QKEGCEAIYIGVVEEDSSGYPDCTEQFINSINKAINLGTADNNIVIKTPLVHLSKGDIVK 174

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            A  +       + LE + +CY           + C +C +C LR KG+ E K
Sbjct: 175 EASSL------KVPLELTWSCYENSE-------FACGTCDSCRLRLKGFKEAK 214


>gi|327392988|dbj|BAK10410.1| protein YbaX [Pantoea ananatis AJ13355]
          Length = 231

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 94/230 (40%), Positives = 134/230 (58%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  +D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLVQALQHYDEVHCVTFDYGQRHREEIDVARDLSLKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++     A   + + LP+TFVPGRNI+FL  A+  AY
Sbjct: 58  -----HKVLDVTMLNELAVSSLTRDSIPVPAYDPEASGLPSTFVPGRNILFLTLASVYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  AI LGM   V   TPLMWL K ETW LA
Sbjct: 113 QVEAEAVITGVCETDFSGYPDCRDEFVKALNHAIGLGMARDVRFETPLMWLNKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
                   + LI EE+ TCY G +      G GC  C AC+LR  G   +
Sbjct: 173 DYWQQ---LTLIREETLTCYNGIK------GDGCGECAACHLRSNGLNAY 213


>gi|312134199|ref|YP_004001537.1| exsb protein [Caldicellulosiruptor owensensis OL]
 gi|311774250|gb|ADQ03737.1| exsB protein [Caldicellulosiruptor owensensis OL]
          Length = 217

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 96/229 (41%), Gaps = 27/229 (11%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           ++ SGG DS+T L    ++   V  +SF YGQ++  ELE        +            
Sbjct: 1   MILSGGMDSTTLLYDVKNQGYEVFAISFLYGQKHSKELEFAKKTCSLLS----------I 50

Query: 73  EDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              I+ ++   +++ S+LT            D+ +  T VP RN++ L  +A  A  LG 
Sbjct: 51  PHRIVDISFFAELAPSALTMPDWDVPEGYYTDSTMKQTVVPNRNMVLLSISAAYAISLGA 110

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G    D+  YPDCR + + A++ A+ L     + +  P + +KK +  +   ++G
Sbjct: 111 KKLFYGAHAGDHPIYPDCRKEFVEAMKKALYLADYIGLELEAPYVDMKKEDILRRGLELG 170

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                 +    + +CY G +         C  C  C  R + + +   K
Sbjct: 171 ------VDYSLTWSCYKGGQK-------ACGRCGTCTERIEAFKKVGVK 206


>gi|300715598|ref|YP_003740401.1| Queuosine biosynthesis protein QueC [Erwinia billingiae Eb661]
 gi|299061434|emb|CAX58546.1| Queuosine biosynthesis protein QueC [Erwinia billingiae Eb661]
          Length = 231

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 94/232 (40%), Positives = 134/232 (57%), Gaps = 22/232 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +   +         
Sbjct: 3   RAVVVFSGGQDSTTCLIQALQQYDEVHCITFDYGQRHRAEIDIARELSLSLGARA----- 57

Query: 70  SLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 +L + +L +++ SSLT+      A     + LP+TFVPGRNI+FL  A+  AY+
Sbjct: 58  ----HKVLDVTMLNELAVSSLTRESIPVPAYDPDASGLPSTFVPGRNILFLTLASIYAYQ 113

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +    ++ GVCETD+SGYPDCR + ++A+  AI LGM   V   TPLMWL K ETW LA 
Sbjct: 114 VEAEAVITGVCETDFSGYPDCRDEFVKALNHAIELGMARSVRFETPLMWLNKAETWALAD 173

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                 LV     E+ TCY G++      G GC  C AC+LR KG  E++  
Sbjct: 174 YWQQLPLVR---NETLTCYNGEK------GDGCGECAACHLRAKGLNEYQAN 216


>gi|118574278|sp|Q1GTF3|QUEC1_SPHAL RecName: Full=7-cyano-7-deazaguanine synthase 1; AltName:
           Full=7-cyano-7-carbaguanine synthase 1; AltName:
           Full=PreQ(0) synthase 1; AltName: Full=Queuosine
           biosynthesis protein queC 1
          Length = 224

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 68/239 (28%), Positives = 99/239 (41%), Gaps = 28/239 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            + ++L SGG DS  C   A +   R+  L+ DY QR++VELE    +   +        
Sbjct: 4   KTVIVLLSGGLDSMVCAGLAREAGARIVALTIDYNQRHRVELESAARIAAHVGAAEHIVL 63

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L L   G  + ++   +V       ++P T+VP RN+IFL     LA     
Sbjct: 64  P-------LDLRRFGGSALTAD-IDVPKDGVGTDIPVTYVPARNLIFLSLTLGLAEARQA 115

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKKYETWKL 183
            +IVIGV   DYSGYPDCR   I+  E    L            +H PL  + K +    
Sbjct: 116 ADIVIGVNALDYSGYPDCRPAFIQGFEKLAALATRDGDQGVRFHIHAPLQHMTKADIAAE 175

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKY 238
           A  +G           S +CY          G  C +C +C LR+KG+ +       +Y
Sbjct: 176 AARLGM------DAAMSWSCYDP-----TPEGLHCGACDSCRLRRKGFADAGLADPTRY 223


>gi|118602572|ref|YP_903787.1| exsB protein [Candidatus Ruthia magnifica str. Cm (Calyptogena
           magnifica)]
 gi|189038939|sp|A1AWK9|QUEC_RUTMC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|118567511|gb|ABL02316.1| preQ(0) biosynthesis protein QueC [Candidatus Ruthia magnifica str.
           Cm (Calyptogena magnifica)]
          Length = 230

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 73/239 (30%), Positives = 113/239 (47%), Gaps = 27/239 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DS+T L+ A  +     +LSFDYGQ+ K EL+      K    +  +   
Sbjct: 9   KAVILLSGGLDSTTTLAIAKTKNFECYSLSFDYGQKQKSELKSAENFAKIFGSIKHRVMK 68

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                  + L+ +   + +    ++    + +++P T+VP RN IFL +A + +  L   
Sbjct: 69  -------ISLSNIDFSALTDDKIDIPKFSKSDDIPITYVPARNTIFLSYALSWSEVLDCQ 121

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKLA 184
           +I IGV   DYSGYPDCR   I+A E   NL  +  +      +HTPL+ L K +  K  
Sbjct: 122 HIFIGVNTLDYSGYPDCREIYIKAFEVMANLATKQSIEGKKLTIHTPLIHLNKAQIIKKG 181

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQ 239
             +G      +    + TCY   +      G  C  C AC  R+ G++E K     +YQ
Sbjct: 182 LSLG------IDYSLTTTCYQADKS-----GKACGICDACEYRKLGFIEAKVADPTRYQ 229


>gi|121612477|ref|YP_999736.1| exsB protein [Campylobacter jejuni subsp. jejuni 81-176]
 gi|148926832|ref|ZP_01810511.1| putative transcriptional regulatory protein [Campylobacter jejuni
           subsp. jejuni CG8486]
 gi|167004712|ref|ZP_02270470.1| exsB protein [Campylobacter jejuni subsp. jejuni 81-176]
 gi|205355756|ref|ZP_03222526.1| putative transcriptional regulatory protein [Campylobacter jejuni
           subsp. jejuni CG8421]
 gi|167016421|sp|A1VX95|QUEC_CAMJJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|87248967|gb|EAQ71929.1| exsB protein [Campylobacter jejuni subsp. jejuni 81-176]
 gi|145844557|gb|EDK21664.1| putative transcriptional regulatory protein [Campylobacter jejuni
           subsp. jejuni CG8486]
 gi|205346533|gb|EDZ33166.1| putative transcriptional regulatory protein [Campylobacter jejuni
           subsp. jejuni CG8421]
          Length = 224

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 69/239 (28%), Positives = 105/239 (43%), Gaps = 22/239 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +  AL + SGG DS+ C   A      +  L FDY QR +   E      K+I + +  
Sbjct: 1   MSKKALCIISGGMDSTLCAYLAKKEGYEIIALHFDYEQRTQ---EKEKECFKQICKALKV 57

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            K  + +   +       ++  S+          +  P T+VP RN IFL  A +LA + 
Sbjct: 58  EKSYILDVSFIKDIGGNALTDKSIDIPKNELCISDVPPITYVPFRNGIFLSIAGSLAEKE 117

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG--MESHVTVHTPLMWLKKYETWKLA 184
              +I IGV E D SGYPDC  + I+  +  IN G      V + TPL+ L K +  +LA
Sbjct: 118 NCESIFIGVVEEDGSGYPDCTDEFIQKAQEFINEGTSKNFKVCIKTPLVRLNKAKIVELA 177

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQ 239
                    N+ LE + +CY  + +        C  C +C LR +G+ +       KY+
Sbjct: 178 LK------ENVPLELTWSCYESEDE-------ACGECDSCLLRLRGFEKAGFKDKIKYK 223


>gi|145627828|ref|ZP_01783629.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
           22.1-21]
 gi|145639290|ref|ZP_01794896.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
           PittII]
 gi|144979603|gb|EDJ89262.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
           22.1-21]
 gi|145271593|gb|EDK11504.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
           PittII]
 gi|309751166|gb|ADO81150.1| Probable 7-cyano-7-deazaguanine (preQ0) synthesis protein QueC
           [Haemophilus influenzae R2866]
          Length = 227

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 86/231 (37%), Positives = 140/231 (60%), Gaps = 23/231 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            A+++FSGGQDS+TCL  A+  +  + VE ++F YGQR+ +ELE    + + +       
Sbjct: 11  KAIVIFSGGQDSTTCLFQAIAEYGKENVEAITFQYGQRHAIELEKARSIAQDLG------ 64

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                +  ++  +++  I+H++L    A ++ +++ LPNTFV GRN +FL++AA  A   
Sbjct: 65  ----IKQTLIDTSVMKAITHNALMDEQAHIEQKESELPNTFVDGRNALFLLYAAIYAKGQ 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI +I+ GVCETD+SGYPDCR   I+++   +NL M+    + TPLM+L K +TW+LA +
Sbjct: 121 GIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLADE 180

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +G   ++N + + +HTCY G          GC  CP+C LR KG  ++  +
Sbjct: 181 LG---VLNYVQKHTHTCYEGIEG-------GCGKCPSCILRNKGLKKYLTQ 221


>gi|328950181|ref|YP_004367516.1| exsB protein [Marinithermus hydrothermalis DSM 14884]
 gi|328450505|gb|AEB11406.1| exsB protein [Marinithermus hydrothermalis DSM 14884]
          Length = 233

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 69/236 (29%), Positives = 103/236 (43%), Gaps = 26/236 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             P A+ L SGG DS+T  + AL     V  LSF YGQR+  EL     V K +      
Sbjct: 1   MKPKAVALLSGGLDSATAAAQALADGYEVIALSFAYGQRHTRELTAAKEVAKALGIQEHY 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +       + LA  G  + +  T  V    +    +P T+VPGRN +FL  A +LA  
Sbjct: 61  VLE-------VNLAQWGGSALTDPTIQVPTGGVNPEVIPPTYVPGRNTVFLAIALSLAEA 113

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYET 180
            G   I +G+   DYSGYPDCR + + A +   NL  +         +  PL+   K + 
Sbjct: 114 RGAEAIYLGINAVDYSGYPDCRPEYLEAFQRLANLATKAGLEGQAPRLVAPLVMDTKADI 173

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            + A  +G      + +E + +CY G  +        C  C +C +R +  +E   
Sbjct: 174 VRRALALG------VPIERTWSCYQGGEEP-------CGLCDSCRIRDRALIEAGR 216


>gi|57505254|ref|ZP_00371183.1| exsB protein [Campylobacter upsaliensis RM3195]
 gi|57016390|gb|EAL53175.1| exsB protein [Campylobacter upsaliensis RM3195]
          Length = 231

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 77/236 (32%), Positives = 108/236 (45%), Gaps = 29/236 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKW 67
             AL + SGG DS+ C   A      +  L FDY QR  + E EC   + + +  L    
Sbjct: 2   KKALCVISGGMDSTLCAYLAKKEGFEIIALHFDYNQRTERKEKECFHQICEHLGVL---- 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                + ++L  + L DI  ++L           +  N LPNT+VP RN IFL  AA+LA
Sbjct: 58  -----KHYVLNASFLKDIGGNALVDESLAVPKNALHQNALPNTYVPFRNGIFLSIAASLA 112

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT--VHTPLMWLKKYETW 181
            + G   + IGV E D SGYPDC  + I+  E  IN G        +  PL++L K E  
Sbjct: 113 EKEGCEALYIGVVEEDSSGYPDCSENFIKKAENFINEGTSEGFKLSIKMPLVYLSKAEIV 172

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            LA         N+ LE + +CY  +          C +C +C LR KG+ +   K
Sbjct: 173 SLALK------ENVPLELTWSCYESEDK-------ACGACDSCLLRLKGFEKAGVK 215


>gi|290474656|ref|YP_003467536.1| putative (aluminum) resistance protein with adenine nucleotide
           alpha hydrolase domain [Xenorhabdus bovienii SS-2004]
 gi|289173969|emb|CBJ80756.1| putative (aluminum) resistance protein with adenine nucleotide
           alpha hydrolase domain [Xenorhabdus bovienii SS-2004]
          Length = 232

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 90/236 (38%), Positives = 136/236 (57%), Gaps = 23/236 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    + K++        
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALRQYDEVHCVTFDYGQRHRAEIDVACRISKELGAAA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKI-----QDNNLPNTFVPGRNIIFLVFAATLA 123
                  +L + +L +++ SSLT++          + + LPNTFVPGRNI+FL  AA  A
Sbjct: 58  -----HKVLDVTLLSELAISSLTRDNIPVPDFSESEKSGLPNTFVPGRNILFLTLAAIYA 112

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           Y++    ++ GVCETD+SGYPDCR + ++A+  A+ LG+   +   TPLMWL K ETW L
Sbjct: 113 YQVEAEAVITGVCETDFSGYPDCRDEFVKALNKAVCLGIARDIRFETPLMWLNKAETWAL 172

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           A        +N +  ++ TCY G +      G GC+ C AC+LR  G   +    Q
Sbjct: 173 AD---YYQKLNFVRTQTLTCYNGIQ------GDGCSECAACHLRANGLNLYLNNTQ 219


>gi|126665592|ref|ZP_01736574.1| Predicted PP-loop superfamily ATPase [Marinobacter sp. ELB17]
 gi|126630220|gb|EBA00836.1| Predicted PP-loop superfamily ATPase [Marinobacter sp. ELB17]
          Length = 222

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 97/236 (41%), Gaps = 28/236 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              + ++++SGG DS T L  A      V  +SF+YGQR+  EL+C   V +++      
Sbjct: 1   MTDTVVVIYSGGMDSFTLLHKARADGLNVHAISFNYGQRHVRELDCAQEVCQRLA----- 55

Query: 67  WKDSLGEDHILPLAILGDIS-----HSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                    ++ +  +GD+       S          Q+  + +T VP RN+I L  A  
Sbjct: 56  -----VPHKVIDIRAMGDVMAGSALTSETIDVPEGDYQEGAMKSTVVPNRNMILLALATG 110

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            A  +  + +  G    D++ YPDCR + +  ++    +     V V  P M   K +  
Sbjct: 111 YAVTVEASAVWFGAHGGDHAIYPDCRPEFVAKMDAVCKVANYQPVAVEAPFMHFTKGDIL 170

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            L   +      NL    + TCY G+          C  C +C  R + + E +++
Sbjct: 171 ALGLQL------NLDYSHTWTCYNGRSK-------ACGRCSSCVERLQAFAEHQQQ 213


>gi|256839259|ref|ZP_05544769.1| queuosine biosynthesis protein queC [Parabacteroides sp. D13]
 gi|256740178|gb|EEU53502.1| queuosine biosynthesis protein queC [Parabacteroides sp. D13]
          Length = 236

 Score =  155 bits (392), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 89/240 (37%), Positives = 138/240 (57%), Gaps = 23/240 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +K+  +AL+ FSGGQDS+TCL WA   F RVE + F YGQ++ +E+E    +        
Sbjct: 13  MKQQDAALVCFSGGQDSTTCLFWAKKHFSRVEAVCFTYGQKHSLEIEVARKIA------- 65

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKI----QDNNLPNTFVPGRNIIFLVFAA 120
               D+     +L ++++  +  +    N ++++     +++ PNTFVPGRN++FL FAA
Sbjct: 66  ---ADANVPFQLLDVSLISQLDPNCSLTNASIEMDQEKPEDSYPNTFVPGRNMVFLTFAA 122

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            LA   GI ++V GV E DYSGYPDCR   +R++   +NL M+    +HTPLM   K E 
Sbjct: 123 ILARGKGIYHLVTGVSEADYSGYPDCRDTFVRSLNVTLNLAMDEQFVIHTPLMDRDKSEV 182

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
           W+L+ ++G  DLV     ++ TCY G          GC  CPAC LR+ G  ++ ++ ++
Sbjct: 183 WELSDELGVFDLVR---TQTLTCYNG------VMAEGCGHCPACKLRKDGLEKYLKRKEE 233


>gi|320335722|ref|YP_004172433.1| exsB protein [Deinococcus maricopensis DSM 21211]
 gi|319757011|gb|ADV68768.1| exsB protein [Deinococcus maricopensis DSM 21211]
          Length = 230

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 63/232 (27%), Positives = 101/232 (43%), Gaps = 25/232 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DSST L+ A      V  LSF YGQR+ VELE    +             
Sbjct: 3   KAVVLLSGGLDSSTTLAIAQQDGYAVTALSFRYGQRHTVELERAAHIAAHFGADHRVIDI 62

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++G       +  G                D  +P T+VPGRN +F+  A +LA  +   
Sbjct: 63  NIG-------SFGGSALTDDRIDVPVDATPDGVIPPTYVPGRNTVFIAVALSLAEAIEAE 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKLA 184
            + +G+   DYSGYPDCR + + A +   +L  ++ +      +  PL+ L K +  + A
Sbjct: 116 RLYLGITAVDYSGYPDCRPEYLDAYQRLADLATKAGLEGRGAKLVAPLLTLTKLDIVRAA 175

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            D+G      + +  + +CY G           C  C +C +R +  ++   
Sbjct: 176 LDLG------VPVNVTWSCYQGG-------TQPCGVCDSCRIRDRALIDAGR 214


>gi|153950993|ref|YP_001397288.1| exsB protein [Campylobacter jejuni subsp. doylei 269.97]
 gi|167016420|sp|A7H1A8|QUEC_CAMJD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|152938439|gb|ABS43180.1| exsB protein [Campylobacter jejuni subsp. doylei 269.97]
          Length = 224

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 69/239 (28%), Positives = 105/239 (43%), Gaps = 22/239 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +  AL + SGG DS+ C   A      +  L FDY QR +   E      K+I + +  
Sbjct: 1   MSKKALCIISGGMDSTLCAYLAKKEGYEIIALHFDYEQRTQ---EKEKECFKQICKALKV 57

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            K  + +   +       ++  S+          +  P T+VP RN IFL  A +LA + 
Sbjct: 58  EKSYILDVSFIKDIGGNALTDKSIDIPKNELCISDIPPITYVPFRNGIFLSIAGSLAEKE 117

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG--MESHVTVHTPLMWLKKYETWKLA 184
              +I IGV E D SGYPDC  + I+  +  IN G      V + TPL+ L K +  +LA
Sbjct: 118 NCESIFIGVVEEDGSGYPDCTDEFIQKAQEFINEGTSKNFKVCIKTPLVRLNKAKIVELA 177

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQ 239
                    N+ LE + +CY  + +        C  C +C LR +G+ +       KY+
Sbjct: 178 LK------ENVPLELTWSCYESEDE-------ACGECDSCLLRLRGFEKAGFKDKIKYK 223


>gi|238764853|ref|ZP_04625794.1| Queuosine biosynthesis protein queC [Yersinia kristensenii ATCC
           33638]
 gi|238696960|gb|EEP89736.1| Queuosine biosynthesis protein queC [Yersinia kristensenii ATCC
           33638]
          Length = 232

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 87/226 (38%), Positives = 129/226 (57%), Gaps = 17/226 (7%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++    +  ++     K  
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALQQYDEVHCMTFDYGQRHRAEIDVARDLAIQLGAKAHKVL 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL--PNTFVPGRNIIFLVFAATLAYRL 126
           D      +  L  L   S +  +  V    + +    P+TFVPGRNI+FL  AA  AY++
Sbjct: 62  D------VTMLNELAVSSLTRDSIPVPTYNEGDGDSLPSTFVPGRNILFLTLAAIYAYQV 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               ++ GVCETD+SGYPDCR + ++A+  AI+LG+   +   TPLMWL K ETW LA  
Sbjct: 116 QAQAVITGVCETDFSGYPDCRDEFVKALNHAIDLGIGRDIAFITPLMWLDKAETWALAD- 174

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
                 ++ +  ++ TCY G +      G GC+ C AC+LR KG  
Sbjct: 175 --YYQQLDRVRHDTLTCYNGIQ------GDGCDQCAACHLRAKGLE 212


>gi|301156476|emb|CBW15947.1| predicted aluminum resistance protein [Haemophilus parainfluenzae
           T3T1]
          Length = 225

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 92/238 (38%), Positives = 139/238 (58%), Gaps = 24/238 (10%)

Query: 1   MNDIIKK-APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVR 57
           MN         AL++FSGGQDS+TCL  A+  +  + VET++F YGQR+ +ELE    + 
Sbjct: 1   MNTSNPNHNRKALVIFSGGQDSTTCLIQAIAEYGVENVETVTFQYGQRHAIELEKARWIA 60

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFL 116
           + +            +  ++  +++  I+H++L   N  ++ +D  LPNTFV GRN +FL
Sbjct: 61  QDLG----------VKQTLIDTSVIKSITHNALMDVNADIEQKDGELPNTFVDGRNALFL 110

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
           ++AA  A   GI +I+ GVCETD+SGYPDCR   I+++   +NL M+    + TPLM+L 
Sbjct: 111 LYAAIYAKGQGINDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYPFNLKTPLMYLT 170

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           K +TW LA ++G    ++ I + +HTCY G          GC  CP+C LR KG  E+
Sbjct: 171 KAQTWSLADELGA---LDYIRQHTHTCYEGVEG-------GCGECPSCKLRDKGLQEY 218


>gi|319897342|ref|YP_004135538.1| pp-loop superfamily atpase [Haemophilus influenzae F3031]
 gi|317432847|emb|CBY81212.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae F3031]
          Length = 227

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 84/231 (36%), Positives = 140/231 (60%), Gaps = 23/231 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            A+++FSGGQDS+TCL  A+  +  + +E ++F YGQR+ +ELE    + + +       
Sbjct: 11  KAIVIFSGGQDSTTCLFQAIAEYGKENIEAITFQYGQRHAIELEKARAIAQDLG------ 64

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                +  ++  +++  I+H++L    A ++ +++ LPNTFV GRN +FL++AA  A   
Sbjct: 65  ----IKQTLIDTSVMKAITHNALMDEQAHIEQKESELPNTFVDGRNALFLLYAAIYAKGQ 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI +I+ GVCETD+SGYPDCR   I+++   +NL M+    + TPLM+L K +TW+LA +
Sbjct: 121 GIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLADE 180

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +G   +++ + + +HTCY G          GC  CP+C LR KG  ++  +
Sbjct: 181 LG---VLDYVQKHTHTCYEGIEG-------GCGKCPSCILRNKGLKKYLTQ 221


>gi|145637056|ref|ZP_01792719.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
           PittHH]
 gi|145269710|gb|EDK09650.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
           PittHH]
          Length = 227

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 86/231 (37%), Positives = 140/231 (60%), Gaps = 23/231 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            A+++FSGGQDS+TCL  A+  +  + VE ++F YGQR+ +ELE    + + +       
Sbjct: 11  KAIVIFSGGQDSTTCLFQAIAEYGKENVEAITFQYGQRHAIELEKACAIAQDLG------ 64

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                +  ++  +++  I+H++L    A ++ ++N LPNTFV GRN +FL++AA  A   
Sbjct: 65  ----IKQTLIDTSVMKAITHNALMDEQAHIEQKENELPNTFVDGRNALFLLYAAIYAKGQ 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI +I+ GVCETD+SGYPDCR   I+++   +NL M+    + TPLM+L K +TW+LA +
Sbjct: 121 GIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLADE 180

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +G   +++ + + +HTCY G          GC  CP+C LR KG  ++  +
Sbjct: 181 LG---VLDYVQKHTHTCYEGIEG-------GCGKCPSCILRNKGLKKYLTQ 221


>gi|33866961|ref|NP_898520.1| ATPase [Synechococcus sp. WH 8102]
 gi|81573666|sp|Q7U3K1|QUEC_SYNPX RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|33639562|emb|CAE08946.1| possible ATPase [Synechococcus sp. WH 8102]
          Length = 226

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 67/228 (29%), Positives = 103/228 (45%), Gaps = 16/228 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           +++ L SGG DS+T  + AL+  DRV  LSFDYGQR+  ELE    V   +         
Sbjct: 5   TSVALLSGGLDSATAAAMALEEGDRVIGLSFDYGQRHHRELEAAAAVASHLGLAEHHCLA 64

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                  + LA  G  + +     +    +Q+  +P T+VPGRN +F+    +LA   G 
Sbjct: 65  -------VDLAAWGGSALTDDAVTIPTDGVQEGVIPPTYVPGRNTVFIAVGLSLAEARGA 117

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V+GV   DYSGYPDCR D +   +   NL  ++    H   +W    E W   + + 
Sbjct: 118 ERLVLGVNAVDYSGYPDCRPDYLNVFQQLANLASKAGREGHGTELWAPLVE-WSKTRIVE 176

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
               +N+ ++ + +CY G           C  C +C +R     E   
Sbjct: 177 EAFRLNVPIQSTWSCYSGG-------TTPCGICDSCRIRDAALREAGR 217


>gi|283956194|ref|ZP_06373679.1| putative transcriptional regulatory protein [Campylobacter jejuni
           subsp. jejuni 1336]
 gi|283792348|gb|EFC31132.1| putative transcriptional regulatory protein [Campylobacter jejuni
           subsp. jejuni 1336]
          Length = 224

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 70/239 (29%), Positives = 105/239 (43%), Gaps = 22/239 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +  AL + SGG DS+ C   A      +  L FDY QR +   E      K+I + +  
Sbjct: 1   MSKKALCIISGGMDSTLCAYLAKKEGYEIIALHFDYEQRTQ---EKERECFKQICKALKV 57

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            K  + +   +       ++  S+          +  P T+VP RN IFL  A +LA + 
Sbjct: 58  EKSYILDVSFIKDIGGNALTDKSIDIPKNELCISDTPPITYVPFRNGIFLSIAGSLAEKE 117

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG--MESHVTVHTPLMWLKKYETWKLA 184
              +I IGV E D SGYPDC  + I+  +  IN G      V + TPL+ L K +  +LA
Sbjct: 118 NCESIFIGVVEEDGSGYPDCTDEFIQKAQEFINEGTSKNFKVCIKTPLVRLNKAKIVELA 177

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQ 239
                    N+ LE + +CY  K +        C  C +C LR +G+ +       KY+
Sbjct: 178 LK------ENVPLELTWSCYESKDE-------ACGECDSCLLRLRGFEKAGFKDKIKYK 223


>gi|103486841|ref|YP_616402.1| ExsB [Sphingopyxis alaskensis RB2256]
 gi|98976918|gb|ABF53069.1| ExsB [Sphingopyxis alaskensis RB2256]
          Length = 227

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 68/239 (28%), Positives = 99/239 (41%), Gaps = 28/239 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            + ++L SGG DS  C   A +   R+  L+ DY QR++VELE    +   +        
Sbjct: 7   KTVIVLLSGGLDSMVCAGLAREAGARIVALTIDYNQRHRVELESAARIAAHVGAAEHIVL 66

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L L   G  + ++   +V       ++P T+VP RN+IFL     LA     
Sbjct: 67  P-------LDLRRFGGSALTAD-IDVPKDGVGTDIPVTYVPARNLIFLSLTLGLAEARQA 118

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKKYETWKL 183
            +IVIGV   DYSGYPDCR   I+  E    L            +H PL  + K +    
Sbjct: 119 ADIVIGVNALDYSGYPDCRPAFIQGFEKLAALATRDGDQGVRFHIHAPLQHMTKADIAAE 178

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKY 238
           A  +G           S +CY          G  C +C +C LR+KG+ +       +Y
Sbjct: 179 AARLGM------DAAMSWSCYDP-----TPEGLHCGACDSCRLRRKGFADAGLADPTRY 226


>gi|34557973|ref|NP_907788.1| PP family ATPase [Wolinella succinogenes DSM 1740]
 gi|81653435|sp|Q7M8H4|QUEC_WOLSU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|34483691|emb|CAE10688.1| ATPASE-PP-loop superfamily [Wolinella succinogenes]
          Length = 233

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 96/226 (42%), Positives = 138/226 (61%), Gaps = 8/226 (3%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL++FSGGQDS+TCL WA+  F  VE ++FDYGQR+++E+E    + +K+       K  
Sbjct: 14  ALVVFSGGQDSTTCLGWAIKHFKSVEAITFDYGQRHRIEIEQSRLIAQKLG-----IKQF 68

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           + E  +        +  +S     +      +LP +FVP RN +F   A   A R G+T+
Sbjct: 69  ILEFDLFSKLGDSALLETSSDLKASPHRTKPHLPASFVPNRNALFFTLAHAYAQREGLTH 128

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           I+ G+ E DYSGYPDCR + I  +E  +NLG +S +    PL+   K +T+ LA++ G  
Sbjct: 129 IITGISEADYSGYPDCREEFITHLERTLNLGSDSSILFAYPLLHRNKAQTFALAKECG-- 186

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            +++L+LEESHTCY G R  RYEWGYGC  CPAC LR+KGW E++ 
Sbjct: 187 -VLDLVLEESHTCYNGDRSHRYEWGYGCKECPACGLREKGWREYQA 231


>gi|119477972|ref|ZP_01618072.1| exsB protein [marine gamma proteobacterium HTCC2143]
 gi|119448885|gb|EAW30127.1| exsB protein [marine gamma proteobacterium HTCC2143]
          Length = 218

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 92/226 (40%), Gaps = 17/226 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++++SGG DS T L+ AL     V  +SF+YGQR+  EL+      K++  +      
Sbjct: 2   KIVVIYSGGIDSFTILNKALQEGHDVLAISFNYGQRHNKELDYAARACKELGIVHKLVDI 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           S  +     L     +   S         +  N+ +T VP RN+I +  A   A   G +
Sbjct: 62  SAMQT----LMSNSSLMAKSDVIIPEGHYEAENMKSTVVPNRNMILISLAIGYAVNEGAS 117

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +  G    D++ YPDCR + + A+  A  L     + V  P +   K    K    +G 
Sbjct: 118 EVWYGAHAGDHTIYPDCRPEFVEAMSKASLLANFEPIAVVAPYLNTDKIAIVKEGLAMG- 176

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
                L   ++ TCY G+          C  C +C  R + + E  
Sbjct: 177 -----LDYGKTWTCYNGREK-------ACGKCGSCVERLEAFAENG 210


>gi|108563047|ref|YP_627363.1| hypothetical protein HPAG1_0622 [Helicobacter pylori HPAG1]
 gi|118574285|sp|Q1CTN3|QUEC_HELPH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|107836820|gb|ABF84689.1| ExsB trans-regulatory protein [Helicobacter pylori HPAG1]
          Length = 228

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 89/228 (39%), Positives = 141/228 (61%), Gaps = 8/228 (3%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            ++ FSGGQDS+T   WA  RF +V  + FDY Q++ VELEC   +   +     +    
Sbjct: 6   CVVSFSGGQDSTTLAVWAKKRFKKVYLVGFDYAQKHSVELECAQKIASLL-----QLPYE 60

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           +     L       +  +S        +Q+ +LPN+FVP RN IF+    + A ++G +N
Sbjct: 61  IISLDFLENITRSALFKNSNDLMGHSHVQNKDLPNSFVPNRNAIFITLLHSYAQKIGASN 120

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           I +GV + D+SGYPDC+ D I++IE A+NLG  + + + TPLM+L K + +++A+D+G  
Sbjct: 121 IALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKDLG-- 178

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
            +++L+++E+HTCY G+R   + +GYGCN CPAC LR+KG+ EF+ K 
Sbjct: 179 -VLDLVIKETHTCYQGERKILHAYGYGCNECPACQLRKKGYEEFQTKV 225


>gi|262382273|ref|ZP_06075410.1| exsB protein [Bacteroides sp. 2_1_33B]
 gi|262295151|gb|EEY83082.1| exsB protein [Bacteroides sp. 2_1_33B]
          Length = 236

 Score =  155 bits (391), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 89/240 (37%), Positives = 138/240 (57%), Gaps = 23/240 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +K+  +AL+ FSGGQDS+TCL WA   F RVE + F YGQ++ +E+E    +        
Sbjct: 13  MKQQDAALVCFSGGQDSTTCLFWAKKHFSRVEAVCFTYGQKHSLEIEVARKIA------- 65

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKI----QDNNLPNTFVPGRNIIFLVFAA 120
               D+     +L ++++  +  +    N ++++     +++ PNTFVPGRN++FL FAA
Sbjct: 66  ---ADADVPFQLLDVSLISQLDPNCSLTNASIEMDQEKPEDSYPNTFVPGRNMVFLTFAA 122

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            LA   GI ++V GV E DYSGYPDCR   +R++   +NL M+    +HTPLM   K E 
Sbjct: 123 ILARGKGIYHLVTGVSEADYSGYPDCRDTFVRSLNVTLNLAMDEQFVIHTPLMDRDKSEV 182

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
           W+L+ ++G  DLV     ++ TCY G          GC  CPAC LR+ G  ++ ++ ++
Sbjct: 183 WELSDELGVFDLVR---TQTLTCYNG------VMAEGCGHCPACKLRKDGLEKYLKRKEE 233


>gi|150010472|ref|YP_001305215.1| putative aluminum resistance protein [Parabacteroides distasonis
           ATCC 8503]
 gi|301311850|ref|ZP_07217772.1| ExsB protein [Bacteroides sp. 20_3]
 gi|189038930|sp|A6LIS9|QUEC_PARD8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|149938896|gb|ABR45593.1| putative aluminum resistance protein [Parabacteroides distasonis
           ATCC 8503]
 gi|300829952|gb|EFK60600.1| ExsB protein [Bacteroides sp. 20_3]
          Length = 224

 Score =  155 bits (391), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 89/240 (37%), Positives = 138/240 (57%), Gaps = 23/240 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +K+  +AL+ FSGGQDS+TCL WA   F RVE + F YGQ++ +E+E    +        
Sbjct: 1   MKQQDAALVCFSGGQDSTTCLFWAKKHFSRVEAVCFTYGQKHSLEIEVARKIA------- 53

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKI----QDNNLPNTFVPGRNIIFLVFAA 120
               D+     +L ++++  +  +    N ++++     +++ PNTFVPGRN++FL FAA
Sbjct: 54  ---ADADVPFQLLDVSLISQLDPNCSLTNASIEMDQEKPEDSYPNTFVPGRNMVFLTFAA 110

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            LA   GI ++V GV E DYSGYPDCR   +R++   +NL M+    +HTPLM   K E 
Sbjct: 111 ILARGKGIYHLVTGVSEADYSGYPDCRDTFVRSLNVTLNLAMDEQFVIHTPLMDRDKSEV 170

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
           W+L+ ++G  DLV     ++ TCY G          GC  CPAC LR+ G  ++ ++ ++
Sbjct: 171 WELSDELGVFDLVR---TQTLTCYNG------VMAEGCGHCPACKLRKDGLEKYLKRKEE 221


>gi|70732354|ref|YP_262110.1| queuosine biosynthesis protein QueC [Pseudomonas fluorescens Pf-5]
 gi|110816206|sp|Q4K6M3|QUEC2_PSEF5 RecName: Full=7-cyano-7-deazaguanine synthase 2; AltName:
           Full=7-cyano-7-carbaguanine synthase 2; AltName:
           Full=PreQ(0) synthase 2; AltName: Full=Queuosine
           biosynthesis protein queC 2
 gi|68346653|gb|AAY94259.1| exsB protein [Pseudomonas fluorescens Pf-5]
          Length = 232

 Score =  155 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 93/235 (39%), Positives = 138/235 (58%), Gaps = 22/235 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +A+++FSGGQDS+TCL  AL  +D V  ++FDYGQR+  E+E    + K++      
Sbjct: 1   MKKTAVIVFSGGQDSTTCLIHALPLYDEVHCITFDYGQRHHAEIETAQRLSKQLGA---- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                    +L  ++L +++ SSLT++      +     +LP+TFVPGRNI+FL  A+  
Sbjct: 57  -----TVHKVLDASLLNELAISSLTRDNIPVPTVNSSGESLPSTFVPGRNILFLTLASIY 111

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           AY++    ++ GVCETD+SGYPDCR + ++A+  A+ LGME  + + TPLMWL K ETW 
Sbjct: 112 AYQVKAETVITGVCETDFSGYPDCRDEFVKALNKALELGMEYKLRLETPLMWLNKAETWA 171

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           LA      + + L+ E++ TCY G        G GC +C AC LR KG   + E 
Sbjct: 172 LADYH---NQLELVREQTLTCYNGI------MGSGCANCDACNLRAKGLNAYLEN 217


>gi|313682542|ref|YP_004060280.1| preq(0) biosynthesis protein quec [Sulfuricurvum kujiense DSM
           16994]
 gi|313155402|gb|ADR34080.1| preQ(0) biosynthesis protein QueC [Sulfuricurvum kujiense DSM
           16994]
          Length = 221

 Score =  155 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 67/236 (28%), Positives = 104/236 (44%), Gaps = 28/236 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMP 65
               AL + SGG DS+        R   +  L F+YGQR    EL C   + K +     
Sbjct: 1   MMKKALCIMSGGMDSTLVAYIMRSRGYEIVALHFNYGQRTVAKELSCFREICKDLG---- 56

Query: 66  KWKDSLGEDHILPLAIL---GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                + E + + L      G  + +  + +V     +  +P T+VP RN IFL  A  +
Sbjct: 57  -----VNEKYEIDLDFFKTIGASALTDHSIDVPTGGIEPGVPITYVPFRNGIFLSIATAI 111

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYET 180
           A + G + I IGV E D SGYPDCR   I A   A NLG +   ++++  PL+ L+K + 
Sbjct: 112 AEKEGCSAIAIGVVEEDSSGYPDCRESFIDAFTKAANLGTKESTNLSIEMPLVRLQKSQI 171

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            + A  +      ++ L  + +CY  +          C  C +C LR +G+     
Sbjct: 172 VQEAIQL------DVPLHLTWSCYSSEDK-------ACGVCDSCRLRLRGFERAGA 214


>gi|126657829|ref|ZP_01728982.1| ExsB [Cyanothece sp. CCY0110]
 gi|126620769|gb|EAZ91485.1| ExsB [Cyanothece sp. CCY0110]
          Length = 231

 Score =  155 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 67/239 (28%), Positives = 114/239 (47%), Gaps = 30/239 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +   P A++L SGG DS+T  + A+D+   V  LS  YGQR++ EL     + + +    
Sbjct: 1   MIHKPLAVVLLSGGLDSATSAAIAIDQGYEVIALSLRYGQRHQRELNAAQTIAQAL---- 56

Query: 65  PKWKDSLGEDHILPLAIL---GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                ++ + +I+ + I    G     S        +    +P+T+VPGRN +F+  A +
Sbjct: 57  -----NISKHYIIDVNIAQWGGSSLTDSSLSLPQSGVDTTVIPSTYVPGRNTVFIALALS 111

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLK 176
           LA   G   I +G+   DYSGYPDCR D ++A +T  NL  ++ +      +  PL+   
Sbjct: 112 LAEAKGAQAIYLGINAVDYSGYPDCRPDYLQAYQTLANLSSKAGLEGKAPLLTAPLITKT 171

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           K +  K A  +G      + + ++ +CY GK +        C  C +C +R +  +E  
Sbjct: 172 KVDIIKDAIKLG------VPIAKTWSCYQGKPEP-------CGLCDSCRIRDRALIEAG 217


>gi|301169929|emb|CBW29533.1| predicted aluminum resistance protein [Haemophilus influenzae
           10810]
          Length = 227

 Score =  155 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 85/231 (36%), Positives = 140/231 (60%), Gaps = 23/231 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            A+++FSGGQDS+TCL  A+  +  + +E ++F YGQR+ +ELE    + + +       
Sbjct: 11  KAIVIFSGGQDSTTCLFQAIAEYGKENIEAITFQYGQRHAIELEKARAIAQDLG------ 64

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                +  ++  +++  I+H++L    A ++ +++ LPNTFV GRN +FL++AA  A   
Sbjct: 65  ----IKQTLIDTSVMKAITHNALMDEQAHIEQKESELPNTFVDGRNALFLLYAAIYAKGQ 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI +I+ GVCETD+SGYPDCR   I+++   +NL M+    + TPLM+L K +TW+LA +
Sbjct: 121 GIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLADE 180

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +G   ++N + + +HTCY G          GC  CP+C LR KG  ++  +
Sbjct: 181 LG---VLNYVQKHTHTCYEGIEG-------GCGKCPSCILRNKGLKKYLTQ 221


>gi|212709204|ref|ZP_03317332.1| hypothetical protein PROVALCAL_00237 [Providencia alcalifaciens DSM
           30120]
 gi|212688116|gb|EEB47644.1| hypothetical protein PROVALCAL_00237 [Providencia alcalifaciens DSM
           30120]
          Length = 233

 Score =  155 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 90/236 (38%), Positives = 138/236 (58%), Gaps = 23/236 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  +D V  ++FDYGQR+++E+E    +  ++        
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALKDYDEVHCVTFDYGQRHRLEIEVAQKLSLQLGAKA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVA-----MKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  +L +++L +++ SSLT++        + + + LP+TFVPGRNI+FL  +A  A
Sbjct: 58  -----HKVLDVSLLNELAISSLTRDNIPVPDYEESEASGLPSTFVPGRNILFLTLSAIYA 112

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           Y++    ++ GVCETD+SGYPDCR + ++A+  A+NLG+   +   TPLMWL K +TW L
Sbjct: 113 YQVNAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGLAKDIRFETPLMWLDKAQTWAL 172

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           A   G    +  I  ++ TCY G +      G GC  C AC+LR KG   +    Q
Sbjct: 173 ADYYGH---LETIRTQTLTCYNGIQ------GDGCAECAACHLRSKGLNYYLNNKQ 219


>gi|322514964|ref|ZP_08067977.1| transcription regulator ExsB [Actinobacillus ureae ATCC 25976]
 gi|322119072|gb|EFX91232.1| transcription regulator ExsB [Actinobacillus ureae ATCC 25976]
          Length = 222

 Score =  155 bits (390), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 87/232 (37%), Positives = 136/232 (58%), Gaps = 23/232 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +   P A+++FSGGQDS+TCL  A+  F  + VE ++F YGQR+ +ELE    + K +  
Sbjct: 1   MNSIPKAVVIFSGGQDSTTCLFQAIQEFGVENVEVVTFQYGQRHAIELEKAAWIAKDLG- 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     +  ++  +++  I+ +++ +   +K Q+ N PNTFV GRN +FL++ A  
Sbjct: 60  ---------VKQTLIDTSVIKAITSNAMMEVREIK-QEGNTPNTFVDGRNALFLLYTAIY 109

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A    I  I  GVCETD+SGYPDCR   ++++   +NL M+ +  + TPLM+L K +TW 
Sbjct: 110 AKGQDIQTIFTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYNFNIRTPLMYLTKKQTWA 169

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           LA  +G     + I + +HTCYLG          GC++CP+C LR+KG  E+
Sbjct: 170 LADKLGAF---DYIRQHTHTCYLGVEG-------GCHTCPSCILREKGLNEY 211


>gi|22299275|ref|NP_682522.1| transcription regulator ExsB-like protein [Thermosynechococcus
           elongatus BP-1]
 gi|81742784|sp|Q8DI59|QUEC_THEEB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|22295458|dbj|BAC09284.1| tlr1732 [Thermosynechococcus elongatus BP-1]
          Length = 233

 Score =  155 bits (390), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 72/240 (30%), Positives = 105/240 (43%), Gaps = 29/240 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +     A++L SGG DSST L  A         LSFDYGQR++ ELE  + +      + 
Sbjct: 1   MVTTQKAVVLLSGGLDSSTVLFRAKALGYACYALSFDYGQRHRRELEAAIAIATSAGVVE 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKI----QDNNLPNTFVPGRNIIFLVFAA 120
            +          L L + G  + + L+ ++            +P T+VP RN IFL  A 
Sbjct: 61  HQILP-------LNLRLWGGSALTDLSIDLPRDRDLATMSQEIPVTYVPARNTIFLSVAL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWL 175
             A  L   ++ IGV   DYSGYPDCR D I A++    LG +       + + TPL+ L
Sbjct: 114 AYAEALEARSVHIGVNALDYSGYPDCRPDYIAAMQEVYRLGTKQGREGQPIEIVTPLIDL 173

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K +  +L    G      +  E++ +CY   +         C  C AC LR   + E  
Sbjct: 174 HKTDIIRLGHGYG------VPWEKTWSCYSDGQ-------QACGRCDACRLRLAAFAELG 220


>gi|260596821|ref|YP_003209392.1| queuosine biosynthesis protein QueC [Cronobacter turicensis z3032]
 gi|260215998|emb|CBA28662.1| Queuosine biosynthesis protein queC [Cronobacter turicensis z3032]
          Length = 231

 Score =  155 bits (390), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 90/232 (38%), Positives = 134/232 (57%), Gaps = 22/232 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++         V       
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALHQYDEVHCVTFDYGQRHRAEID---------VASALAAS 52

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++             LP+TFVPGRNI+FL  A+  AY
Sbjct: 53  LGARAHKVLDVTLLNELAVSSLTRDSIPVPDYDPNAEGLPSTFVPGRNILFLTLASIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A+ LGM   V   TPLMWL K ETW LA
Sbjct: 113 QVQAEAVITGVCETDFSGYPDCRDEFVKALNHAVALGMARDVRFETPLMWLNKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
              G    +++I +++ TCY G +      G GC  C AC+LR  G  +++ 
Sbjct: 173 DYWG---KLDVIRQQTLTCYNGIQ------GDGCGECAACHLRANGLSQYQA 215


>gi|68249737|ref|YP_248849.1| PP-loop superfamily ATPase [Haemophilus influenzae 86-028NP]
 gi|81335834|sp|Q4QLA8|QUEC_HAEI8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|68057936|gb|AAX88189.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
           86-028NP]
          Length = 227

 Score =  155 bits (390), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 85/231 (36%), Positives = 140/231 (60%), Gaps = 23/231 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            A+++FSGGQDS+TCL  A+  +  + +E ++F YGQR+ +ELE    + + +       
Sbjct: 11  KAIVIFSGGQDSTTCLFQAIAEYGKENIEAITFQYGQRHAIELEKARAIVQDLG------ 64

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                +  ++  +++  I+H++L    A ++ ++N LPNTFV GRN +FL++AA  A   
Sbjct: 65  ----IKQTLIDTSVMKAITHNALMDEQAHIEQKENELPNTFVDGRNALFLLYAAIYAKGQ 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI +I+ GVCETD+SGYPDCR   I+++   +NL M+    + TPLM+L K +TW+LA +
Sbjct: 121 GIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLADE 180

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +G   +++ + + +HTCY G          GC  CP+C LR KG  ++  +
Sbjct: 181 LG---VLDYVQKHTHTCYEGIEG-------GCGKCPSCILRNKGLKKYLTQ 221


>gi|304413821|ref|ZP_07395238.1| putative aluminum resistance protein [Candidatus Regiella
           insecticola LSR1]
 gi|304283541|gb|EFL91936.1| putative aluminum resistance protein [Candidatus Regiella
           insecticola LSR1]
          Length = 244

 Score =  155 bits (390), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 93/242 (38%), Positives = 138/242 (57%), Gaps = 20/242 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              SA+++FSGGQDS+TCL  AL ++++V  ++FDY QR++ E+E    + K +     +
Sbjct: 1   MQQSAVVVFSGGQDSTTCLIQALQQYEKVHCITFDYQQRHREEIEVAKKLVKTLN--TAR 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLT---------KNVAMKIQDNNLPNTFVPGRNIIFLV 117
            + +     IL + +L +++ SSLT          +         +PNTFVPGRNI+FL 
Sbjct: 59  TEKNSIVHKILDVTLLNELTISSLTQNHIPIPPYTDANKHTNKKAIPNTFVPGRNILFLT 118

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
            AA  AY++  T ++ GVCETD+SGYPDCR D ++++  AINLG++  +   TPLMWL K
Sbjct: 119 LAAIYAYKINTTTVITGVCETDFSGYPDCRDDFVKSLNQAINLGIDRSIDFITPLMWLNK 178

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            E W LA        + LI   + TCY G        G GC  C AC+LR +G + ++  
Sbjct: 179 AEIWALADH---YQQLKLIRSSTLTCYQG------NIGDGCKQCAACHLRSQGLIYYQAN 229

Query: 238 YQ 239
            Q
Sbjct: 230 KQ 231


>gi|317009346|gb|ADU79926.1| hypothetical protein HPIN_03450 [Helicobacter pylori India7]
          Length = 228

 Score =  154 bits (389), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 87/227 (38%), Positives = 138/227 (60%), Gaps = 8/227 (3%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            ++ FSGGQDS+T   WA  RF +V  + FDY Q++ VELEC   +   +     +    
Sbjct: 6   CVIGFSGGQDSTTLAVWAKKRFKKVYLVGFDYAQKHSVELECAQKIASLL-----QLPYE 60

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           + +   L       +  +S         Q+ +LPN+FVP RN IF+    + A ++G +N
Sbjct: 61  IIQLDFLENITHSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKIGASN 120

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           I +GV + D+SGYPDC+ D I++IE A+NLG  + + + TPLM+L K + +++A+D+G  
Sbjct: 121 IALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKDLGA- 179

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
             ++L+++E+HTCY G+R   + +GYGC  CPAC LR+KG+ EF+  
Sbjct: 180 --LDLVIKETHTCYQGERKILHAYGYGCGECPACQLRKKGYEEFQTN 224


>gi|67458609|ref|YP_246233.1| trans-regulatory protein ExsB [Rickettsia felis URRWXCal2]
 gi|75536925|sp|Q4UMZ0|QUEC_RICFE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|67004142|gb|AAY61068.1| Trans-regulatory protein ExsB [Rickettsia felis URRWXCal2]
          Length = 224

 Score =  154 bits (389), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 69/238 (28%), Positives = 113/238 (47%), Gaps = 26/238 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+T L+ A +    +  +SF+YGQRN  E        +K+ EL+ ++ 
Sbjct: 2   KKAVILVSGGADSATVLAIAREMGYEIHAMSFNYGQRNNAE-------LRKVKELIKEYN 54

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQ----DNNLPNTFVPGRNIIFLVFAATLAY 124
               +   + L   G  + +    +V           ++P T+VP RN IFL +A   A 
Sbjct: 55  VKQHKIVYIDLRAFGGSALTDNNIDVPHYHDVNELPEDVPVTYVPARNTIFLSYALGYAE 114

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME--SHVTVHTPLMWLKKYETWK 182
            +G  +I IGV  +D + YPDCR + I++ E   NL     + +T+HTPL+ + K +  K
Sbjct: 115 VIGAKDIFIGVHTSDSANYPDCRPEYIKSFEEMANLATNIGNRITIHTPLIDMAKEQIIK 174

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
              ++G      +  + + +CY    D        C +C AC +R   +   K   QD
Sbjct: 175 TGLELG------VDYKNTISCYDPTEDDLS-----CGNCLACMIRLDAFK--KNNVQD 219


>gi|94676652|ref|YP_588712.1| exsB protein [Baumannia cicadellinicola str. Hc (Homalodisca
           coagulata)]
 gi|110816212|sp|Q1LTK2|QUEC_BAUCH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|94219802|gb|ABF13961.1| exsB protein [Baumannia cicadellinicola str. Hc (Homalodisca
           coagulata)]
          Length = 238

 Score =  154 bits (389), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 87/232 (37%), Positives = 138/232 (59%), Gaps = 13/232 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           ++    +++FSGGQDS+TCL  AL ++D+V  ++FDYGQR++ E+    C+ +++   + 
Sbjct: 5   QQIKKTVVVFSGGQDSTTCLIQALTQYDQVYCITFDYGQRHRAEI----CIARRLTITLG 60

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            +   + +   L +     ++  ++   +A K   N+  +TFVPGRNI+FL  AA  AY+
Sbjct: 61  AYDHQIIDTSALNVLAASSLTRENIIVPLAEKNHMNSSLSTFVPGRNIVFLTLAAIYAYQ 120

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +    I+ GVCETD+SGYPDCR   I+A+  A+NLGM  ++   +PLMWL K ETW LA 
Sbjct: 121 VKAEVIITGVCETDFSGYPDCREKFIQALNKAVNLGMAYNIHFISPLMWLNKAETWALAD 180

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                  ++L+  E+ TCY G +      G GC  C +C LR +G   +K++
Sbjct: 181 ---YYQKLDLVCNETLTCYNGIQ------GKGCGFCTSCSLRARGLETYKQQ 223


>gi|148826200|ref|YP_001290953.1| PP-loop superfamily ATPase [Haemophilus influenzae PittEE]
 gi|229846222|ref|ZP_04466334.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
           7P49H1]
 gi|189038917|sp|A5UCR9|QUEC_HAEIE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|148716360|gb|ABQ98570.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
           PittEE]
 gi|229811226|gb|EEP46943.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae
           7P49H1]
          Length = 227

 Score =  154 bits (389), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 86/231 (37%), Positives = 140/231 (60%), Gaps = 23/231 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            A+++FSGGQDS+TCL  A+  +  + +E ++F YGQR+ +ELE    + + +       
Sbjct: 11  KAIVIFSGGQDSTTCLFQAIAEYGKENIEAITFQYGQRHAIELEKARAIVQDLG------ 64

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                +  ++  +++  I+H++L    A ++ ++N LPNTFV GRN +FL++AA  A   
Sbjct: 65  ----IKQTLIDTSVMKAITHNALMDEQAHIEQKENELPNTFVDGRNALFLLYAAIYAKGQ 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI +I+ GVCETD+SGYPDCR   I+++   +NL M+    + TPLM+L K +TW+LA +
Sbjct: 121 GIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLADE 180

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +G   ++N + + +HTCY G          GC  CP+C LR KG  ++  +
Sbjct: 181 LG---VLNYVQKHTHTCYEGIEG-------GCGKCPSCILRNKGLKKYLTQ 221


>gi|37527722|ref|NP_931067.1| queuosine biosynthesis protein QueC [Photorhabdus luminescens
           subsp. laumondii TTO1]
 gi|81418478|sp|Q7N0M0|QUEC_PHOLL RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|36787158|emb|CAE16234.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 232

 Score =  154 bits (389), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 82/225 (36%), Positives = 133/225 (59%), Gaps = 13/225 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++FSGGQDS+TCL  A++++D V  ++FDYGQR++ E++    V   +  +  K  D
Sbjct: 3   RAVVVFSGGQDSTTCLIQAINQYDEVHCVTFDYGQRHRAEIDVARNVSHFLGVVAHKVLD 62

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +L    L  ++  ++      + + + +P+TFVPGRNI+FL  AA  AY++   
Sbjct: 63  VT----LLNELALSSLTRDNIPVPDHSESEKSAIPSTFVPGRNILFLTLAAIYAYQVEAE 118

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++ GVCETD+SGYPDCR + ++A+  A++LG+   +   TPLMWL K ETW L+     
Sbjct: 119 AVITGVCETDFSGYPDCRDEFVKALNKAVSLGIARDIRFETPLMWLNKAETWALSD---Y 175

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              ++ +  ++ TCY G +      G GC +C AC+LR  G  ++
Sbjct: 176 YQHLDFVRSQTLTCYNGIQ------GNGCGTCAACHLRANGLEQY 214


>gi|154490850|ref|ZP_02030791.1| hypothetical protein PARMER_00767 [Parabacteroides merdae ATCC
           43184]
 gi|154088598|gb|EDN87642.1| hypothetical protein PARMER_00767 [Parabacteroides merdae ATCC
           43184]
          Length = 273

 Score =  154 bits (389), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 89/233 (38%), Positives = 131/233 (56%), Gaps = 23/233 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+ FSGGQDS+TCL WA   F RVE + F YGQ++ +E+E    +            D+
Sbjct: 60  ALVCFSGGQDSTTCLFWAKKHFSRVEAVCFTYGQKHSLEIEVARKIA----------ADA 109

Query: 71  LGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                +L ++++  +  +    N    +  +   ++ PNTFVPGRN++FL FAA LA   
Sbjct: 110 DVPFQLLDVSLISQLDPNCSLTNTGISMDQEKPADSYPNTFVPGRNMVFLTFAAILARSK 169

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI N+V GV E D+SGYPDCR   +R++   +NL M+    +HTPLM   K E W+LA +
Sbjct: 170 GIFNLVTGVSEADFSGYPDCRDTFVRSLNVTLNLAMDEQFVIHTPLMDRDKSEVWELADE 229

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           +G  DLV     ++ TCY G          GC  CPAC LR++G  ++ ++ +
Sbjct: 230 LGVFDLVR---TQTLTCYNGI------MAEGCGHCPACKLRREGLEKYLKRRR 273


>gi|156935002|ref|YP_001438918.1| queuosine biosynthesis protein QueC [Cronobacter sakazakii ATCC
           BAA-894]
 gi|167016428|sp|A7MFJ8|QUEC_ENTS8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|156533256|gb|ABU78082.1| hypothetical protein ESA_02853 [Cronobacter sakazakii ATCC BAA-894]
          Length = 231

 Score =  154 bits (389), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 90/230 (39%), Positives = 132/230 (57%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR++ E++         V       
Sbjct: 2   KRAVVVFSGGQDSTTCLIQALHQYDEVHCVTFDYGQRHRAEID---------VASALAAS 52

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++             LP+TFVPGRNI+FL  A+  AY
Sbjct: 53  LGARAHKVLDVTLLNELAVSSLTRDSIPVPDYDPDAEGLPSTFVPGRNILFLTLASIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A+ LGM   V   TPLMWL K ETW LA
Sbjct: 113 QVQAEAVITGVCETDFSGYPDCRDEFVKALNHAVALGMARDVRFETPLMWLNKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              G    +++I  ++ TCY G +      G GC  C AC+LR  G  ++
Sbjct: 173 DYWG---KLDVIRHQTLTCYNGIQ------GDGCGECAACHLRANGLSQY 213


>gi|257091669|ref|YP_003165310.1| exsB protein [Candidatus Accumulibacter phosphatis clade IIA str.
           UW-1]
 gi|257044193|gb|ACV33381.1| exsB protein [Candidatus Accumulibacter phosphatis clade IIA str.
           UW-1]
          Length = 233

 Score =  154 bits (389), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 72/239 (30%), Positives = 104/239 (43%), Gaps = 27/239 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+T L+ A         LS DYGQR++ EL     + + +     +  
Sbjct: 11  KPAVVLLSGGLDSATTLAIARADGFACHCLSIDYGQRHRAELAAAALLAEALGAREHR-- 68

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L L + G  + +     V +    + +P T+VP RN + L  A   A  LG 
Sbjct: 69  -----QLRLTLEVFGGSALTDERIAVPVDGVHSGIPITYVPARNTVMLSLALAWAEVLGS 123

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETWKL 183
            +I +GV   DYSGYPDCR + I A E   NL   + V      +H PLM L K E  + 
Sbjct: 124 RDIFVGVNAVDYSGYPDCRPEYIAAYEKMANLATRAAVQGASLTIHAPLMGLGKAEIIQR 183

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKY 238
              +G      +    + +CY   RD     G  C  C +C LR+ G+         +Y
Sbjct: 184 GITLG------VDYGLTVSCYQADRD-----GRACGVCDSCRLRRAGFSAAGMADPTRY 231


>gi|255012284|ref|ZP_05284410.1| putative aluminum resistance protein [Bacteroides sp. 2_1_7]
 gi|298374841|ref|ZP_06984799.1| ExsB protein [Bacteroides sp. 3_1_19]
 gi|298269209|gb|EFI10864.1| ExsB protein [Bacteroides sp. 3_1_19]
          Length = 245

 Score =  154 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 89/240 (37%), Positives = 138/240 (57%), Gaps = 23/240 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +K+  +AL+ FSGGQDS+TCL WA   F RVE + F YGQ++ +E+E    +        
Sbjct: 22  MKQQDAALVCFSGGQDSTTCLFWAKKHFSRVEAVCFTYGQKHSLEIEVARKIA------- 74

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKI----QDNNLPNTFVPGRNIIFLVFAA 120
               D+     +L ++++  +  +    N ++++     +++ PNTFVPGRN++FL FAA
Sbjct: 75  ---ADADVPFQLLDVSLISQLDPNCSLTNASIEMDQEKPEDSYPNTFVPGRNMVFLTFAA 131

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            LA   GI ++V GV E DYSGYPDCR   +R++   +NL M+    +HTPLM   K E 
Sbjct: 132 ILARGKGIYHLVTGVSEADYSGYPDCRDTFVRSLNVTLNLAMDEQFVIHTPLMDRDKSEV 191

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
           W+L+ ++G  DLV     ++ TCY G          GC  CPAC LR+ G  ++ ++ ++
Sbjct: 192 WELSDELGVFDLVR---TQTLTCYNG------VMAEGCGHCPACKLRKDGLEKYLKRKEE 242


>gi|291616556|ref|YP_003519298.1| YbaX [Pantoea ananatis LMG 20103]
 gi|291151586|gb|ADD76170.1| YbaX [Pantoea ananatis LMG 20103]
          Length = 255

 Score =  154 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 94/233 (40%), Positives = 135/233 (57%), Gaps = 22/233 (9%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +    A+++FSGGQDS+TCL  AL  +D V  ++FDYGQR++ E++    +  K+     
Sbjct: 23  RAMKRAVVVFSGGQDSTTCLVQALQHYDEVHCVTFDYGQRHREEIDVARDLSLKLGARA- 81

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                     +L + +L +++ SSLT++     A   + + LP+TFVPGRNI+FL  A+ 
Sbjct: 82  --------HKVLDVTMLNELAVSSLTRDSIPVPAYDPKASGLPSTFVPGRNILFLTLASV 133

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            AY++    ++ GVCETD+SGYPDCR + ++A+  AI LGM   V   TPLMWL K ETW
Sbjct: 134 YAYQVEAEAVITGVCETDFSGYPDCRDEFVKALNHAIGLGMARDVRFETPLMWLNKAETW 193

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            LA        + LI EE+ TCY G +      G GC  C AC+LR  G   +
Sbjct: 194 ALADYWQQ---LTLIREETLTCYNGIK------GDGCGECAACHLRSNGLNAY 237


>gi|157414337|ref|YP_001481593.1| putative transcriptional regulatory protein [Campylobacter jejuni
           subsp. jejuni 81116]
 gi|166218758|sp|A8FJH9|QUEC_CAMJ8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|157385301|gb|ABV51616.1| putative transcriptional regulatory protein [Campylobacter jejuni
           subsp. jejuni 81116]
 gi|315931290|gb|EFV10259.1| 7-cyano-7-deazaguanine synthase [Campylobacter jejuni subsp. jejuni
           327]
          Length = 224

 Score =  154 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 70/239 (29%), Positives = 106/239 (44%), Gaps = 22/239 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +  AL + SGG DS+ C   A      +  L FDY QR +   E      K+I + +  
Sbjct: 1   MSKKALCIISGGMDSTLCAYLAKKEGYEIIALHFDYEQRTQ---EKERECFKQICKALKV 57

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            K  + +   +       ++  S+          +  P T+VP RN IFL  A +LA + 
Sbjct: 58  EKSYILDVSFIKDIGGNALTDKSIDIPKNELCISDTPPITYVPFRNGIFLSIAGSLAEKE 117

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG--MESHVTVHTPLMWLKKYETWKLA 184
              +I IGV E D SGYPDC  + I+  +  IN G      V + TPL+ L K +  +LA
Sbjct: 118 NCESIFIGVVEEDGSGYPDCTDEFIQKAQEFINEGTSKNFKVYIKTPLVRLNKAKIVELA 177

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM----EFKEKYQ 239
                    N+ LE + +CY  + +        C  C +C LR +G+     + K KY+
Sbjct: 178 LK------ENVPLELTWSCYESEDE-------ACGECDSCLLRLRGFEKVGFKDKIKYK 223


>gi|319779038|ref|YP_004129951.1| Queuosine Biosynthesis QueC ATPase [Taylorella equigenitalis MCE9]
 gi|317109062|gb|ADU91808.1| Queuosine Biosynthesis QueC ATPase [Taylorella equigenitalis MCE9]
          Length = 222

 Score =  154 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 90/231 (38%), Positives = 139/231 (60%), Gaps = 23/231 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIVELM 64
            +  AL++FSGGQDS+TCL  A++ F    V+ ++F YGQR+++EL+    +   +    
Sbjct: 1   MSEKALVVFSGGQDSTTCLLQAIENFGVGNVKAITFIYGQRHEIELKKAREIAIDLG--- 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSS-LTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                   E  IL L+++  I+ ++ + K   +K  ++ LPNTFV GRN +FL+++   A
Sbjct: 58  -------IEQTILDLSVMKSITTNALMQKGAEIKTDESGLPNTFVDGRNALFLLYSCIYA 110

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              GI NIVIGVCETD+SGYPDCR   ++++  ++NL M+    +HTPLMWL K +TW+L
Sbjct: 111 KSQGIKNIVIGVCETDFSGYPDCRDIFVKSMNVSMNLAMDYDFVIHTPLMWLTKAQTWEL 170

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           A  +G    ++ +   +HTCY G          GC +CP+C LR +G  E+
Sbjct: 171 ADKLG---RLDYVRTRTHTCYEGVEG-------GCGNCPSCVLRNRGLEEY 211


>gi|92114160|ref|YP_574088.1| ExsB [Chromohalobacter salexigens DSM 3043]
 gi|110816222|sp|Q1QVW9|QUEC_CHRSD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|91797250|gb|ABE59389.1| preQ(0) biosynthesis protein QueC [Chromohalobacter salexigens DSM
           3043]
          Length = 251

 Score =  154 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 56/226 (24%), Positives = 85/226 (37%), Gaps = 18/226 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++++SGG DS T L  AL     V  LSF YGQR+  ELE    V +++         
Sbjct: 30  KAVVIYSGGMDSYTVLHRALRAGFEVHALSFHYGQRHSRELETAHDVCQRLG-----IAH 84

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            + +   +   I       +           +N+  T VP RN+I L  A   A  +G  
Sbjct: 85  QVVDIRAIHGLIGNSALTDATQTMPDGDYDADNMAATVVPNRNMILLSLAIGHAVNIGAN 144

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
               G    D+  YPDCR + +  +     +   + V +  P +   K E       +G 
Sbjct: 145 VCFYGAHGGDHVLYPDCRPEFVERMNDVAAIADFTPVRIAAPYLHASKEEILADGLAMG- 203

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
                L   ++ TCYLG           C  C +C  R   +    
Sbjct: 204 -----LDYAQTWTCYLGAERS-------CGHCGSCRERLAAFAAQG 237


>gi|313673177|ref|YP_004051288.1| exsb protein [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939933|gb|ADR19125.1| exsB protein [Calditerrivibrio nitroreducens DSM 19672]
          Length = 221

 Score =  154 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 62/232 (26%), Positives = 95/232 (40%), Gaps = 26/232 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++L SGG DS    + A +    +  L  +YGQ+ + +         K+ +      
Sbjct: 2   KKGIVLVSGGLDSCVTAAIAKNMGYSLYFLHINYGQKTEKKELES---FNKLADFFKVVG 58

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL----PNTFVPGRNIIFLVFAATLAY 124
                  I+ ++ L  I  SSLT +     + +      PNT+VP RN   L  A + A 
Sbjct: 59  K-----LIVDISYLKVIGGSSLTVDSIEIERGDPFRKDIPNTYVPFRNGNILSIAVSWAE 113

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG-MESHVTVHTPLMWLKKYETWKL 183
            +    I IGV E D SGYPDCR     A    + +G   + + + TPL+   K E  ++
Sbjct: 114 VIRADRIFIGVVEEDSSGYPDCRKQFYDAFNQILKVGLAYTDLLIETPLIDKTKGEIVRI 173

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
              +G         E + +CY        E    C  C +C LR KG+ E  
Sbjct: 174 GAKLGA------PFELTWSCY-------GENEVACGVCDSCLLRLKGFKEAG 212


>gi|219850958|ref|YP_002465390.1| exsB protein [Methanosphaerula palustris E1-9c]
 gi|254764360|sp|B8GJL3|QUEC_METPE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|219545217|gb|ACL15667.1| exsB protein [Methanosphaerula palustris E1-9c]
          Length = 221

 Score =  154 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 69/233 (29%), Positives = 98/233 (42%), Gaps = 29/233 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKWK 68
            A+ L SGG DSST    A D    +  L  +YGQR +  EL+    + + +        
Sbjct: 2   KAVCLLSGGMDSSTLAYVAKDMGYHIHALHLNYGQRTEKKELQSATAIARSLSAE----- 56

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL----PNTFVPGRNIIFLVFAATLAY 124
               E   L L        SSLT         +      PNT+VP RN   L  A + A 
Sbjct: 57  ----EFIPLDLGYFKAFGKSSLTDPAIDVDVFDENRPELPNTYVPFRNANLLSIATSFAE 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG--MESHVTVHTPLMWLKKYETWK 182
                 I IGV   DYSGYPDCR   I+A +  ++LG    +H+ + TP + L K +  +
Sbjct: 113 SRDADAIFIGVQALDYSGYPDCRPAFIQAFQQVMDLGTADGTHIDLLTPFIGLTKTDILR 172

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
              D+G      +  E + +CY  +          C  C +C+ RQK + E  
Sbjct: 173 KGLDLG------VPYEHTWSCYQNEEK-------ACGVCGSCHFRQKAFAELG 212


>gi|71278544|ref|YP_269637.1| exsB protein [Colwellia psychrerythraea 34H]
 gi|110816204|sp|Q47ZY2|QUEC2_COLP3 RecName: Full=7-cyano-7-deazaguanine synthase 2; AltName:
           Full=7-cyano-7-carbaguanine synthase 2; AltName:
           Full=PreQ(0) synthase 2; AltName: Full=Queuosine
           biosynthesis protein queC 2
 gi|71144284|gb|AAZ24757.1| exsB protein [Colwellia psychrerythraea 34H]
          Length = 219

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 90/225 (40%), Gaps = 18/225 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++++SGG DS T L+ A+     V  LSFDYGQ++  EL     V  ++        
Sbjct: 2   KKLVVIYSGGMDSFTALNKAVKEGFDVYALSFDYGQKHNKELIYAQNVCNELN-----VP 56

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             + +   +          S          + +N+ +T VP RN+I +  A   A  +  
Sbjct: 57  HKILDIKSISTLFTSSSLVSDDINVPDGHYEADNMKSTVVPNRNMILISLAIGYAVDIEA 116

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G    D+  YPDCR + ++ ++ A  +     V VH P +   K    K    +G
Sbjct: 117 EGVWYGAHSGDHLIYPDCRPEFVKVMDQASKVANFEPVYVHAPYLNTDKIGILKDGIKMG 176

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
                 L   ++ TCY GK          C +C +C  R + +  
Sbjct: 177 ------LDYSKTWTCYQGKEK-------ACGTCGSCVERLEAFQA 208


>gi|258516746|ref|YP_003192968.1| exsB protein [Desulfotomaculum acetoxidans DSM 771]
 gi|257780451|gb|ACV64345.1| exsB protein [Desulfotomaculum acetoxidans DSM 771]
          Length = 229

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 35/240 (14%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            +A+++ SGG DS+ C+++A  R   +  ++F+YGQR+  E+     +            
Sbjct: 2   KNAVIILSGGMDSTVCMAYAGSREYNLYPITFNYGQRHAYEVGQAKKIASYF-------- 53

Query: 69  DSLGEDHILPLAILGDISHSSLTKNV-------AMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                  ++ LA   +I  S+LT            K   + +P T+VP RN +FL  A  
Sbjct: 54  -QSNRHLVVDLAFFREIGGSALTSEAIELPLNRTEKEIGSGIPITYVPFRNGVFLSLAVA 112

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG------MESHVTVHTPLMWL 175
            A  +    I IGV   DYSGYPDCR + I A +T I+ G       +  + + TPL++ 
Sbjct: 113 YAEAVKAQAIFIGVNALDYSGYPDCRPEFIEAYQTVIDAGTKQASEDKQKLQIITPLLYK 172

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K E  K+  D+         L+ + +CY G+          C  C +C LR KG+ E  
Sbjct: 173 TKAEIVKMGMDLAA------PLQLTTSCYRGEE-------LACGRCDSCLLRLKGFSEAG 219


>gi|320108725|ref|YP_004184315.1| exsB protein [Terriglobus saanensis SP1PR4]
 gi|319927246|gb|ADV84321.1| exsB protein [Terriglobus saanensis SP1PR4]
          Length = 236

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 67/231 (29%), Positives = 95/231 (41%), Gaps = 15/231 (6%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A++  SGG DS+ C + A  R   V  L F YGQR +           + +      
Sbjct: 14  RERAVICLSGGMDSTVCATLA-SRDFDVYALHFSYGQRTEARELASARAVAEYIGAKEFL 72

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +     +  + L D S +            + +P T+VP RN  FL  A + A  LG
Sbjct: 73  PLRMDLFRQIGGSALTDTSIAVPNAPEDEATIGHEVPVTYVPFRNAHFLSAAVSWAEVLG 132

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-HVTVHTPLMWLKKYETWKLAQD 186
              + IG  E D SGYPDCR     A    I  G +  ++ V TPL+ LKK E  +L  +
Sbjct: 133 APTVSIGAVEQDSSGYPDCRPAYYDAFNALIQQGTKEGNIRVITPLIHLKKAEIVRLGVE 192

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +         L  S +CY G+          C  C +C LR + + E  EK
Sbjct: 193 LHA------PLHVSWSCYSGEEK-------ACGVCESCSLRLRAFKEAGEK 230


>gi|325279460|ref|YP_004252002.1| exsB protein [Odoribacter splanchnicus DSM 20712]
 gi|324311269|gb|ADY31822.1| exsB protein [Odoribacter splanchnicus DSM 20712]
          Length = 223

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 80/237 (33%), Positives = 117/237 (49%), Gaps = 34/237 (14%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             A++L SGG DSST L  A  +  D +  ++F+YGQ++  E          +   +   
Sbjct: 2   KKAIVLLSGGLDSSTALYLAQSQGFDEIYAITFEYGQKHDKE----------LKSAIAIA 51

Query: 68  KDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           K +  ++H +   +L   S  +LT          I+  ++P+T+VP RN++FL  AA+ A
Sbjct: 52  KAAGVKEHKIVNLLLNQWSGCALTDPDMEVEDGHIERQDIPSTYVPARNMVFLSVAASWA 111

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG------MESHVTVHTPLMWLKK 177
             L IT+I IGV E DYSGY DCR + I+A+E AINLG       +  +T+H P M L K
Sbjct: 112 DALDITDIFIGVSEVDYSGYVDCREEFIKAMENAINLGTVLGAEKKQRITIHAPFMHLTK 171

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            E  KL   +G      +    + TCY G           C  C +C LR K + E 
Sbjct: 172 AEEVKLGVSLG------VDFGLTWTCYRGGEHP-------CGVCDSCLLRAKAFAEA 215


>gi|253990884|ref|YP_003042240.1| queuosine biosynthesis protein QueC [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253782334|emb|CAQ85498.1| Queuosine biosynthesis protein queC [Photorhabdus asymbiotica]
          Length = 232

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 82/225 (36%), Positives = 134/225 (59%), Gaps = 13/225 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++FSGGQDS+TCL  A++++D V  ++FDYGQR+  E++    + + +  +  K  D
Sbjct: 3   RAVVVFSGGQDSTTCLIQAINQYDEVHCITFDYGQRHCAEIDVARNISRSLGVVAHKVLD 62

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +L    L  ++ +++      + + + +PNTFVPGRNI+FL  AA  AY++   
Sbjct: 63  ----ITLLNELALSSLTRNNIPIPNYNESEKSTIPNTFVPGRNILFLTLAAIYAYQVEAE 118

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++ GVCETD+SGYPDCR + ++A+  A++LG+   +   TPLMWL K ETW L+     
Sbjct: 119 TVITGVCETDFSGYPDCRDEFVKAMNKAVSLGIARDIRFETPLMWLNKAETWALSD---Y 175

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
              ++ +  ++ TCY G +      G GC +C AC+LR  G  ++
Sbjct: 176 YQHLDFVRSQTLTCYNGIQ------GNGCGTCAACHLRTSGLEQY 214


>gi|308185915|ref|YP_003930046.1| Queuosine biosynthesis protein queC 2 [Pantoea vagans C9-1]
 gi|308056425|gb|ADO08597.1| Queuosine biosynthesis protein queC 2 [Pantoea vagans C9-1]
          Length = 231

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 90/228 (39%), Positives = 132/228 (57%), Gaps = 22/228 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  A+  +D V  ++FDYGQR++ E+E    +   +        
Sbjct: 2   KRAVVVFSGGQDSTTCLIQAVQLYDEVHCVTFDYGQRHREEIEVARDLAMILGVRA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++     A   + + LP TFVPGRNI+FL  A+  AY
Sbjct: 58  -----HKVLDVTMLNELAVSSLTRDNIPVPAYNPEASGLPTTFVPGRNILFLTLASVYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    ++ GVCETD+SGYPDCR + ++A+  A++LGM   V   TPLMWL K ETW LA
Sbjct: 113 QVEAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAREVRFETPLMWLNKAETWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
                   + L+ E++ TCY G +      G GC  C AC+LR  G  
Sbjct: 173 DYWQQ---LALVREQTLTCYNGVK------GDGCGECAACHLRANGLQ 211


>gi|74318220|ref|YP_315960.1| ExsB ATPase [Thiobacillus denitrificans ATCC 25259]
 gi|110816275|sp|Q3SGT8|QUEC_THIDA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|74057715|gb|AAZ98155.1| ExsB ATPase [Thiobacillus denitrificans ATCC 25259]
          Length = 224

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 69/234 (29%), Positives = 100/234 (42%), Gaps = 24/234 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             P A++L SGG DS+T L+ A +       LS DYGQR+  EL     +  ++  +  +
Sbjct: 1   MKPCAIVLLSGGLDSATALAMAREAGFACHALSLDYGQRHTAELAAAARLAAQLGAVEHR 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     L L   G  + +  +  V            +VP RN + L  A   A  L
Sbjct: 61  V-------IRLGLGDFGGSALTDASIAVPESPVAGIPVT-YVPARNTVMLALALAWAEVL 112

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETW 181
           G  +I IGV   DYSGYPDCR + I A E   NL  ++ V      +H PL  L K E  
Sbjct: 113 GARDIFIGVNAVDYSGYPDCRPEFIEAFERMANLATKAGVEGAQLRIHAPLQHLSKAEII 172

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
                +G      +   ++ +CY    +     G  C  C AC LR++G++   
Sbjct: 173 HRGTALG------VDYAQTVSCYQADAE-----GRACGRCDACRLRREGFLAAG 215


>gi|332288621|ref|YP_004419473.1| queuosine biosynthesis protein QueC [Gallibacterium anatis UMN179]
 gi|330431517|gb|AEC16576.1| queuosine biosynthesis protein QueC [Gallibacterium anatis UMN179]
          Length = 224

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 91/236 (38%), Positives = 136/236 (57%), Gaps = 23/236 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +   A+++FSGGQDS+TCL  AL  +    VE ++F YGQR+ +EL+    +   +    
Sbjct: 2   QNKKAIVIFSGGQDSTTCLLQALQTYGNGNVEAITFHYGQRHSIELDKSRWIANDLG--- 58

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL-PNTFVPGRNIIFLVFAATLA 123
                   +  IL L+++  I+H++L  N     Q     PNTFV GRN +FL++AA  A
Sbjct: 59  -------VKQTILDLSLMQSITHNALMDNNETIQQKQGELPNTFVDGRNALFLLYAAIYA 111

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              GI++I+ GVCETD+SGYPDCR   I+++   +NL M+    + TPLMWL K ETW L
Sbjct: 112 KGQGISDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYSFNIITPLMWLTKKETWAL 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           A  +G    +  +++ +HTCY G          GC+ CP+C LR+KG  E+  + +
Sbjct: 172 ADQLG---RLEYVMQHTHTCYEGVEG-------GCHHCPSCLLREKGLNEYLAEKE 217


>gi|307545034|ref|YP_003897513.1| queuosine biosynthesis protein QueC [Halomonas elongata DSM 2581]
 gi|307217058|emb|CBV42328.1| K06920 queuosine biosynthesis protein QueC [Halomonas elongata DSM
           2581]
          Length = 257

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/224 (26%), Positives = 94/224 (41%), Gaps = 18/224 (8%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++++SGG DS T L  AL     V  LSFDYGQR+  EL+    V + + E+  +  D  
Sbjct: 30  VVIYSGGMDSFTVLHRALGEGRDVHALSFDYGQRHSRELDVARRVCRDL-EVPHQVVDIR 88

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
               ++  + L D    +           +NL +T VP RN++ L  A   A  +G   +
Sbjct: 89  AIHGLIDNSALTD----AERVMPDGDYDADNLADTVVPNRNMMLLSMAIAKAVNIGAGRV 144

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
             G    D+  YPDCR + + A+     +     V +HTP +   K +       +G   
Sbjct: 145 DYGAHGGDHVLYPDCRPEFVEAMNAVAGIANFEPVEIHTPYLRHTKADILADGLSMG--- 201

Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
              L   ++ TCYLG+          C  C +C  R   +    
Sbjct: 202 ---LDYADTWTCYLGE-------SLACGRCGSCRERLAAFAANG 235


>gi|113970396|ref|YP_734189.1| queuosine biosynthesis protein QueC [Shewanella sp. MR-4]
 gi|123325002|sp|Q0HII5|QUEC_SHESM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|113885080|gb|ABI39132.1| exsB protein [Shewanella sp. MR-4]
          Length = 239

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 94/224 (41%), Positives = 142/224 (63%), Gaps = 21/224 (9%)

Query: 17  GGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHI 76
           GGQDS+TCL  AL +FD V  ++FDYGQR++ E+E    + K++          +    +
Sbjct: 15  GGQDSTTCLIQALTQFDEVHGITFDYGQRHREEIEVAKSLAKRL---------KITSHKV 65

Query: 77  LPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
           + +++L +++ S+LT++   V+ ++ +N LPNTFVPGRNI+FL  A   AY+LG   I+ 
Sbjct: 66  MDVSLLNELAISALTRDAIPVSHELMENGLPNTFVPGRNILFLTLAGIYAYQLGAEAIIT 125

Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
           GVCETD+SGYPDCRHD +RA+E+A+  GM+  + + TPLMWL K +TW LA        +
Sbjct: 126 GVCETDFSGYPDCRHDFVRAMESALVQGMDKKLEIITPLMWLNKAQTWALADK---YQQL 182

Query: 194 NLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +L+   + TCY G        G GC  CPAC+LR++G  ++ + 
Sbjct: 183 DLVRHHTLTCYNGIV------GDGCGECPACHLRKRGLEDYLQN 220


>gi|87307052|ref|ZP_01089198.1| Predicted PP-loop superfamily ATPase [Blastopirellula marina DSM
           3645]
 gi|87290425|gb|EAQ82313.1| Predicted PP-loop superfamily ATPase [Blastopirellula marina DSM
           3645]
          Length = 219

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 51/226 (22%), Positives = 89/226 (39%), Gaps = 18/226 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + + SGG DS+T L   +D    V  +S +YGQR+  EL+    +  K+         
Sbjct: 3   KVVAVVSGGMDSATLLYHLIDAGHDVRAISINYGQRHVKELDYARQLCDKVG-----VPQ 57

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            + +   +      +       +       + N+  T VP RN+I L  +   A      
Sbjct: 58  IVADLSAINPLFGANSLSGREIEIPEGHYAEENMKLTVVPNRNMILLSVSIAWAISQECV 117

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +  G    D++ YPDCR +   A++ A  L   S V +  P + + K +  +   ++G 
Sbjct: 118 AVAYGAHSGDHAIYPDCRPEFAAAMDQAAKLCDWSAVELWRPFVDIDKGDIAQRGSELG- 176

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
                +  E + TCY G           C  C AC  R++ + +  
Sbjct: 177 -----VPYELTWTCYKG-------LAEHCGKCGACVERKEAFAKHG 210


>gi|254445125|ref|ZP_05058601.1| exsB protein [Verrucomicrobiae bacterium DG1235]
 gi|198259433|gb|EDY83741.1| exsB protein [Verrucomicrobiae bacterium DG1235]
          Length = 243

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 59/245 (24%), Positives = 101/245 (41%), Gaps = 33/245 (13%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVE-TLSFDYGQRNKVELECRLCVRKKIVELM 64
            +  SA+ ++SGG DS+  L    +    ++  LS +YGQ++  EL+      + +    
Sbjct: 7   SRPGSAVAVYSGGMDSTVMLYRMRELGIAIKGALSVNYGQKHSKELDAAAEFCRALG--- 63

Query: 65  PKWKDSLGEDHILPLAILGDISH-----SSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                   E  +  L+ L  I       SS  +      ++  + +T VP RN+I L  A
Sbjct: 64  -------IEHRVADLSGLQGIFGKSSLTSSAEEVPEGHYEEEQMKSTVVPNRNMILLSVA 116

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            + A  LG   +       D++ YPDCR +   A++ AI L   S V+++ P +   K +
Sbjct: 117 TSWAISLGAEAVAYAAHGGDHAIYPDCREEFAEALDKAIRLCDWSEVSLYRPFVTWTKAD 176

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK---- 235
             K    +G      + LE + +CY G           C  C  C  R++ +        
Sbjct: 177 IAKAGAKLG------VKLERTWSCYKGGD-------RHCGRCGTCVERREAFHLAGVEDS 223

Query: 236 EKYQD 240
             Y+D
Sbjct: 224 TAYED 228


>gi|117920608|ref|YP_869800.1| queuosine biosynthesis protein QueC [Shewanella sp. ANA-3]
 gi|189029564|sp|A0KX75|QUEC_SHESA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|117612940|gb|ABK48394.1| exsB protein [Shewanella sp. ANA-3]
          Length = 239

 Score =  153 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 94/224 (41%), Positives = 143/224 (63%), Gaps = 21/224 (9%)

Query: 17  GGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHI 76
           GGQDS+TCL  AL +FD V  ++FDYGQR++ E+E    + K++          +    +
Sbjct: 15  GGQDSTTCLIQALTQFDEVHGITFDYGQRHREEIEVAKSLAKRL---------KITSHKV 65

Query: 77  LPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
           + +++L +++ S+LT++   V+ ++ +N LPNTFVPGRNI+FL  A   AY+LG   I+ 
Sbjct: 66  IDVSLLNELAISALTRDAIPVSHELMENGLPNTFVPGRNILFLTLAGIYAYQLGAGAIIT 125

Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
           GVCETD+SGYPDCRHD +RA+E+A+  GM+  + + TPLMWL K +TW LA        +
Sbjct: 126 GVCETDFSGYPDCRHDFVRAMESALVQGMDKKLEIITPLMWLNKAQTWALADK---YQQL 182

Query: 194 NLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +L+   + TCY G        G GC +CPAC+LR++G  ++ + 
Sbjct: 183 DLVRHHTLTCYNGIV------GDGCGACPACHLRKRGLEDYLQN 220


>gi|88604066|ref|YP_504244.1| ExsB [Methanospirillum hungatei JF-1]
 gi|110816233|sp|Q2FS65|QUEC_METHJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|88189528|gb|ABD42525.1| preQ(0) biosynthesis protein QueC [Methanospirillum hungatei JF-1]
          Length = 220

 Score =  153 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 72/235 (30%), Positives = 103/235 (43%), Gaps = 29/235 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWK 68
            A+ L SGG DSST    A      +  L F YGQR  + E EC   + + +  L     
Sbjct: 2   KAVCLLSGGMDSSTLACLAKHDGYDILALHFSYGQRTEEKERECAKRIARHLNAL----- 56

Query: 69  DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
               E   + L  L  +  SSLT       A +   + +P+T+VP RN   L  A + A 
Sbjct: 57  ----EFLEVDLTYLKAVGASSLTDYAMQVKAHEDAGDGIPDTYVPFRNANLLSVATSFAE 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH--TPLMWLKKYETWK 182
             G   I IGV  +DYSGYPDCR + I A +  I LG      +   TP + L K E  K
Sbjct: 113 ARGADAIYIGVQASDYSGYPDCRPEFIDAFQKVITLGTRPDAGIILKTPFVKLNKAEILK 172

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +  D+      N+  E++ +CY        E    C  C +C+ R + + +   +
Sbjct: 173 IGMDL------NVPYEDTWSCY-------AENEVACGICGSCHYRLEAFRQIGIQ 214


>gi|218767647|ref|YP_002342159.1| hypothetical protein NMA0702 [Neisseria meningitidis Z2491]
 gi|81543061|sp|Q9JVT8|QUEC_NEIMA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|121051655|emb|CAM07958.1| hypothetical protein NMA0702 [Neisseria meningitidis Z2491]
 gi|254674036|emb|CBA09820.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
 gi|319409903|emb|CBY90228.1| conserved hypothetical protein [Neisseria meningitidis WUE 2594]
          Length = 219

 Score =  153 bits (385), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 91/232 (39%), Positives = 142/232 (61%), Gaps = 23/232 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
              AL++FSGGQDS+TCL  A+  +  + V+ ++F YGQR+ VELE    + + +     
Sbjct: 3   NQKALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELERARWIAQDLG---- 58

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +  +L L+++  I+H++L  +  A++  +N +PNTFV GRN +FL++AA  A 
Sbjct: 59  ------VKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNALFLLYAAIYAK 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             GI +I+ GVCETD+SGYPDCR   ++++   +NL M+    +HTPLM+L K +TW LA
Sbjct: 113 GQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            ++G    ++ I E++HTCY G          GC  CP+C LR++G  E+ E
Sbjct: 173 DEMGA---LDYIREQTHTCYNGIVG-------GCRECPSCILRERGLAEYLE 214


>gi|283953651|ref|ZP_06371182.1| exsB protein [Campylobacter jejuni subsp. jejuni 414]
 gi|283794692|gb|EFC33430.1| exsB protein [Campylobacter jejuni subsp. jejuni 414]
          Length = 226

 Score =  153 bits (385), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 68/240 (28%), Positives = 108/240 (45%), Gaps = 22/240 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +  AL + SGG DS+ C   A     ++  L FDY QR +   E      ++I + +  
Sbjct: 1   MSKKALCIISGGMDSTLCAYLAKKEDYKIIALHFDYEQRTQ---EKERDCFEQICKALKV 57

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            K  + +   +       ++  ++         ++  P T+VP RN IFL  A +LA + 
Sbjct: 58  EKSYILDVSFIKDIGGNALTDKNIDIPKNELCINDTPPITYVPFRNGIFLSIAGSLAEKE 117

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG--MESHVTVHTPLMWLKKYETWKLA 184
              +I IGV E D SGYPDC  + I+  +  IN G      V + TPL+ L K +  KLA
Sbjct: 118 NCESIFIGVVEEDGSGYPDCTDEFIQKAQKFINEGTSKNFKVCIKTPLVRLNKAQIVKLA 177

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQD 240
                    N+ LE + +CY  + +        C  C +C LR +G+ +       KY++
Sbjct: 178 LK------ENVPLELTWSCYESEDE-------ACGECDSCLLRLRGFEKAGFKDKIKYKN 224


>gi|304388253|ref|ZP_07370373.1| transcription regulator ExsB [Neisseria meningitidis ATCC 13091]
 gi|304337780|gb|EFM03929.1| transcription regulator ExsB [Neisseria meningitidis ATCC 13091]
 gi|325141743|gb|EGC64196.1| exsB protein [Neisseria meningitidis 961-5945]
 gi|325197737|gb|ADY93193.1| exsB protein [Neisseria meningitidis G2136]
          Length = 219

 Score =  153 bits (385), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 91/232 (39%), Positives = 143/232 (61%), Gaps = 23/232 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
              AL++FSGGQDS+TCL  A+  +  + V+ ++F YGQR+ VELE    + + +     
Sbjct: 3   NQKALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELERARWIAQDLG---- 58

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +  +L L+++  I+H++L  +  A++  +N +PNTFV GRN +FL++AA  A 
Sbjct: 59  ------VKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNALFLLYAAIYAK 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             GI +I+ GVCETD+SGYPDCR   ++++   +NL M+    +HTPLM+L K +TW LA
Sbjct: 113 GQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            ++G   +++ I E++HTCY G          GC  CP+C LR++G  E+ E
Sbjct: 173 DEMG---VLDYIREQTHTCYNGIVG-------GCRECPSCILRERGLAEYLE 214


>gi|294789668|ref|ZP_06754901.1| ExsB protein [Simonsiella muelleri ATCC 29453]
 gi|294482380|gb|EFG30074.1| ExsB protein [Simonsiella muelleri ATCC 29453]
          Length = 218

 Score =  153 bits (385), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 91/232 (39%), Positives = 137/232 (59%), Gaps = 22/232 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +     AL++FSGGQDS+TCL  A++ F    V+ ++F YGQR+ +ELE    + + +  
Sbjct: 1   MTIQKQALVIFSGGQDSTTCLFQAINEFGVGNVQAITFTYGQRHAIELERAQWIAQDLR- 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     +  +L L+++G I+H++L  N A      +LPNTFV GRN +FL++AA  
Sbjct: 60  ---------VKQTVLDLSLIGSITHNALMDNTAAIDTSGSLPNTFVDGRNALFLLYAAIY 110

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A    I  I +GVCETD+SGYPDCR   ++++   +NL M     + TPLM+L K ETW 
Sbjct: 111 AKSQNIHTIFVGVCETDFSGYPDCRDVFVKSMNVTLNLAMAYDFDIRTPLMYLTKKETWA 170

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           LA  +G   +++ + E +HTCYLG          GC+ CP+C LR++G  E+
Sbjct: 171 LADQMG---VLDYVREHTHTCYLGV-------PNGCHECPSCVLRERGLSEY 212


>gi|307352769|ref|YP_003893820.1| exsB protein [Methanoplanus petrolearius DSM 11571]
 gi|307156002|gb|ADN35382.1| exsB protein [Methanoplanus petrolearius DSM 11571]
          Length = 221

 Score =  153 bits (385), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 68/235 (28%), Positives = 100/235 (42%), Gaps = 29/235 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKW 67
             A+ L SGG DS+T    A D    +  L   YGQR +  E EC   V   +       
Sbjct: 2   KKAVCLLSGGMDSTTLAYVAKDIGYEILALHTRYGQRTEKKEAECARKVASLLGA----- 56

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQ----DNNLPNTFVPGRNIIFLVFAATLA 123
                E   + L+ L     SSL                +PNT+VP RN   L  A + A
Sbjct: 57  ----VEFTEISLSHLLAFGGSSLIDKGMEVHDHEDLGEGIPNTYVPFRNSNLLSIATSYA 112

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG--MESHVTVHTPLMWLKKYETW 181
              G   I IGV  +DY+GYPDCR + + A +  I+LG   ++++T+ TP + L K E  
Sbjct: 113 EARGAEAIFIGVQASDYAGYPDCRPEFVEAFQHVIDLGTSDDTNITLMTPFVNLNKTEIV 172

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           +   ++G      +  E + +CY          G  C +C +CY R + +     
Sbjct: 173 RRGIELG------VPYEHTWSCYR-------SNGPACGNCDSCYYRLEAFKANGI 214


>gi|33151752|ref|NP_873105.1| hypothetical protein HD0558 [Haemophilus ducreyi 35000HP]
 gi|81423753|sp|Q7VNH6|QUEC_HAEDU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|33147973|gb|AAP95494.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
          Length = 224

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 92/239 (38%), Positives = 138/239 (57%), Gaps = 24/239 (10%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRK 58
           MN   +    A+++FSGGQDS+TCL  A+  F R  VE ++F YGQR+ +ELE    + +
Sbjct: 1   MNRSTRSH-KAIVIFSGGQDSTTCLFQAIQEFKRENVEVITFQYGQRHSIELEKAAWIAQ 59

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
            +            +  ++  +++  I+ ++L     +K QD + PNTFV GRN +FL++
Sbjct: 60  NLG----------IKQTVIDTSVIKAITTNALITEATIK-QDGDKPNTFVDGRNALFLLY 108

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            A  A   GI  I  GVCETD+SGYPDCR   I+++   +NL M+ +  + TPLM+L K 
Sbjct: 109 TAIYAKGQGIQTIFTGVCETDFSGYPDCRDIFIKSMNVTLNLAMDYNFNIRTPLMYLTKK 168

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +TW LA  +G  + V    E +HTCYLG          GC++CP+C LR+KG  E+  +
Sbjct: 169 QTWALADQLGAFEYVR---EHTHTCYLGVEG-------GCHTCPSCLLREKGLNEYLAE 217


>gi|210134845|ref|YP_002301284.1| trans-regulatory protein ExsB [Helicobacter pylori P12]
 gi|254764351|sp|B6JLM6|QUEC_HELP2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|210132813|gb|ACJ07804.1| trans-regulatory protein ExsB [Helicobacter pylori P12]
          Length = 228

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 88/227 (38%), Positives = 139/227 (61%), Gaps = 8/227 (3%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            ++ FSGGQDS+T   WA  RF +V  + FDY Q++ VELEC   +   +     +    
Sbjct: 6   CVISFSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECAQKIASLL-----QLPYE 60

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           +     L       +  +S         Q+ +LPN+FVP RN IF+    + A ++G +N
Sbjct: 61  IISLDFLENITRSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKIGASN 120

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           I +GV + D+SGYPDC+ D I++IE A+NLG  + + + TPLM+L K + +++A+D+G  
Sbjct: 121 IALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKDLG-- 178

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            +++L+++E+HTCY G+R   + +GYGC  CPAC LR+KG+ EF+ K
Sbjct: 179 -VLDLVIKETHTCYQGERRILHAYGYGCGECPACQLRKKGYEEFQAK 224


>gi|307637328|gb|ADN79778.1| Queuosine Biosynthesis QueC ATPase [Helicobacter pylori 908]
 gi|325995919|gb|ADZ51324.1| Queuosine Biosynthesis protein [Helicobacter pylori 2018]
 gi|325997513|gb|ADZ49721.1| Queuosine Biosynthesis QueC ATPase [Helicobacter pylori 2017]
          Length = 228

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 90/227 (39%), Positives = 139/227 (61%), Gaps = 8/227 (3%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            ++ FSGGQDS+T   WA  RF +V  + FDY Q++ VELEC   +   +     +    
Sbjct: 6   CVIGFSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECAQKIASLL-----QLPYE 60

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           +     L       +  +S         Q+ +LPN+FVP RN IF+    + A +LG +N
Sbjct: 61  IIPLDFLENITHSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKLGASN 120

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           I +GV + D+SGYPDC+ D I++IE A+NLG  + + + TPLM+L K + +++A+D+G  
Sbjct: 121 IALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKIVTPLMFLSKAQEFQMAKDLGA- 179

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
             ++LI++E+HTCY G+R   + +GYGC+ CPAC LR+KG+ EF+ K
Sbjct: 180 --LDLIIKETHTCYQGERKILHAYGYGCDKCPACQLRKKGFEEFQAK 224


>gi|123967115|ref|YP_001012196.1| ATPase [Prochlorococcus marinus str. MIT 9515]
 gi|167016445|sp|A2BZ78|QUEC_PROM5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|123201481|gb|ABM73089.1| hypothetical ATPase [Prochlorococcus marinus str. MIT 9515]
          Length = 224

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 78/240 (32%), Positives = 118/240 (49%), Gaps = 26/240 (10%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  +  SA++L SGG DSST    A     ++  LSFDYGQR+K EL   L + K     
Sbjct: 1   MNLENKSAVILLSGGLDSSTVTGLAKASKAKIFGLSFDYGQRHKKELNSALTIAKHFAIE 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD-NNLPNTFVPGRNIIFLVFAATL 122
             K          L L++ G  S +   K++ ++    N +PNT+VPGRN IF+  A + 
Sbjct: 61  EFKIVK-------LDLSLWGGSSLTDTKKDLPIEGVQLNTIPNTYVPGRNTIFISVALSY 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTPLMWLKK 177
           A  +    I +GV   DYSGYPDCR D I+  +    L       ++ + + TPL+ L K
Sbjct: 114 AEAINADLIGLGVNALDYSGYPDCRPDYIKKFQELAYLANKRGREDNPIKLWTPLIDLNK 173

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            +  +LA D       N+ LE++ +CY G           C  C +C +RQ  + +++ K
Sbjct: 174 EDIIQLAFDH------NVPLEKTWSCYSGNLKP-------CGKCDSCRIRQTAYKKWQIK 220


>gi|114047412|ref|YP_737962.1| queuosine biosynthesis protein QueC [Shewanella sp. MR-7]
 gi|122944692|sp|Q0HVF0|QUEC_SHESR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|113888854|gb|ABI42905.1| exsB protein [Shewanella sp. MR-7]
          Length = 239

 Score =  152 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 94/224 (41%), Positives = 142/224 (63%), Gaps = 21/224 (9%)

Query: 17  GGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHI 76
           GGQDS+TCL  AL +FD V  ++FDYGQR++ E+E    + K++          +    +
Sbjct: 15  GGQDSTTCLIQALTQFDEVHGITFDYGQRHREEIEVAKSLAKRL---------KITSHKV 65

Query: 77  LPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
           + +++L +++ S+LT++   V+ ++ +N LPNTFVPGRNI+FL  A   AY+LG   I+ 
Sbjct: 66  MDVSLLNELAISALTRDAIPVSHELMENGLPNTFVPGRNILFLTLAGIFAYQLGAEAIIT 125

Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
           GVCETD+SGYPDCRHD +RA+E+A+  GM+  + + TPLMWL K +TW LA        +
Sbjct: 126 GVCETDFSGYPDCRHDFVRAMESALVQGMDKKLEIITPLMWLNKAQTWALADK---YQQL 182

Query: 194 NLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +L+   + TCY G        G GC  CPAC+LR++G  ++ + 
Sbjct: 183 DLVRHHTLTCYNGIV------GDGCGDCPACHLRKRGLEDYLQN 220


>gi|149923844|ref|ZP_01912234.1| ExsB ATPase [Plesiocystis pacifica SIR-1]
 gi|149815301|gb|EDM74846.1| ExsB ATPase [Plesiocystis pacifica SIR-1]
          Length = 239

 Score =  152 bits (383), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 71/245 (28%), Positives = 112/245 (45%), Gaps = 22/245 (8%)

Query: 12  LLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           ++L SGG DS+T L+ A      RV  LSF YGQR+ +EL C     ++      +  D 
Sbjct: 1   MVLLSGGLDSTTVLAIAAREAGQRVHALSFAYGQRHALELGCAARQARRFDAAAHEVVDL 60

Query: 71  LGEDHIL-PLAILGDISHSSLTKNVAMKI-----QDNNLPNTFVPGRNIIFLVFAATLAY 124
                ++ P   L   S  ++    A +      +   +P+T+VP RN +FL +A   A 
Sbjct: 61  SHLGRLVAPATSLVAASELAVPDAEARQRQLERGEAEAIPSTYVPARNTLFLSYALAWAE 120

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-SHVTVHTPLMWLKKYETWKL 183
            +G  +I +GV   DYSGYPDCR + + A E    L  + + V V  PL+ L+K    + 
Sbjct: 121 VVGARDIWLGVNAVDYSGYPDCRPEFVAAFEAMARLATKATDVRVRAPLIDLEKGAIIER 180

Query: 184 AQDIGGQDLVNLILEESHTCYL----GKRDKRYEWGYGCNSCPACYLRQKGWMEFK---- 235
              +G      +   ++ +CY     G+     E    C  C +C LR++G+        
Sbjct: 181 GLGLG------VDYGDTTSCYDPSSVGEPGSADERPLACGRCESCMLRRQGFAAAGVEDP 234

Query: 236 EKYQD 240
            +Y D
Sbjct: 235 TRYAD 239


>gi|157165515|ref|YP_001466416.1| ExsB protein [Campylobacter concisus 13826]
 gi|189038900|sp|A7ZCA8|QUEC_CAMC1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|157101540|gb|EAT99024.2| ExsB protein [Campylobacter concisus 13826]
          Length = 221

 Score =  152 bits (383), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 66/229 (28%), Positives = 106/229 (46%), Gaps = 22/229 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR-LCVRKKIVELMPKW 67
             A+ + SGG DS+ C   A      V  L FDY QR     +     + +++  +    
Sbjct: 2   KKAVCIMSGGMDSTLCAVMAKRAGYDVVALHFDYNQRTMKREKRAFDEICERLGVVKKIN 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D      +  +A +G  + +  +  +      N++PNT+VP RN +F+  AA LA + G
Sbjct: 62  LD------VSFIAQIGGNALTDTSMQIRKDGVSNDVPNTYVPFRNGVFISIAAALAEKEG 115

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWKLAQ 185
              I IGV E D SGYPDC+   I++I  AINLG   +    + TPL+ L K +    + 
Sbjct: 116 AQAIYIGVVEEDSSGYPDCKESFIKSINEAINLGTSADFSCEIITPLVNLSKADIVSKSL 175

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           ++      N  +E + +CY  + +        C  C +C LR  G+ + 
Sbjct: 176 EL------NSPIELTWSCYESEDE-------ACGLCDSCRLRLNGFKKA 211


>gi|284053643|ref|ZP_06383853.1| exsB protein [Arthrospira platensis str. Paraca]
 gi|291569828|dbj|BAI92100.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 226

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 71/235 (30%), Positives = 103/235 (43%), Gaps = 29/235 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DSST L  A         LSF+Y QR+  ELE    + +       +  +
Sbjct: 2   KAVILLSGGLDSSTVLYQAKADGYECYALSFNYQQRHLRELEAAAKIAQAAGVAAHQTVE 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKI----QDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    L   G  + +    ++            +P T+VP RN IFL FA      
Sbjct: 62  -------FDLKRWGGSALTDDNIDLPCDRTLAEMSATIPITYVPARNTIFLSFALAYGEA 114

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKKYET 180
           +G   I IGV   DYSGYPDCR D I A+++   LG +       +T++TPL+ LKK + 
Sbjct: 115 IGADRIYIGVNALDYSGYPDCRPDYIVAMQSVFRLGTKQGREGNPITINTPLIDLKKTDI 174

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            +L   +G      +  E + +CY G+ +        C  C AC LR   +    
Sbjct: 175 IQLGNSLG------VPWEHTWSCYGGEAE-------ACGVCDACRLRLAAFQALG 216


>gi|121634320|ref|YP_974565.1| hypothetical protein NMC0464 [Neisseria meningitidis FAM18]
 gi|167016439|sp|A1KSD4|QUEC_NEIMF RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|120866026|emb|CAM09764.1| hypothetical protein NMC0464 [Neisseria meningitidis FAM18]
 gi|254669985|emb|CBA04680.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
 gi|308388708|gb|ADO31028.1| putative aluminum resistance protein [Neisseria meningitidis
           alpha710]
 gi|325127641|gb|EGC50557.1| exsB protein [Neisseria meningitidis N1568]
 gi|325131675|gb|EGC54380.1| exsB protein [Neisseria meningitidis M6190]
 gi|325137691|gb|EGC60268.1| exsB protein [Neisseria meningitidis ES14902]
          Length = 219

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 91/232 (39%), Positives = 143/232 (61%), Gaps = 23/232 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
              AL++FSGGQDS+TCL  A+  +  + V+ ++F YGQR+ VELE    + + +     
Sbjct: 3   NQKALVIFSGGQDSTTCLIQAIQIYGRENVQAITFQYGQRHAVELERARWIAQDLG---- 58

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +  +L L+++  I+H++L  +  A++  +N +PNTFV GRN +FL++AA  A 
Sbjct: 59  ------VKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNALFLLYAAIYAK 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             GI +I+ GVCETD+SGYPDCR   ++++   +NL M+    +HTPLM+L K +TW LA
Sbjct: 113 GQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            ++G   +++ I E++HTCY G          GC  CP+C LR++G  E+ E
Sbjct: 173 DEMG---VLDYIREQTHTCYNGIVG-------GCRECPSCILRERGLAEYLE 214


>gi|255322577|ref|ZP_05363722.1| ExsB protein [Campylobacter showae RM3277]
 gi|255300485|gb|EET79757.1| ExsB protein [Campylobacter showae RM3277]
          Length = 223

 Score =  151 bits (382), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 68/232 (29%), Positives = 104/232 (44%), Gaps = 22/232 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR-LCVRKKIVELMPKW 67
             A+ + SGG DS+ C   A      +  L FDYGQR     +     + ++I  L    
Sbjct: 2   KKAVCIMSGGMDSTLCAVLAKRAGYEIIALHFDYGQRTMKREKLAFEQISERIGALKKVN 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D+        +A +G  + +  +  +       + P T+VP RN IF+  AA LA + G
Sbjct: 62  LDASF------IASIGGNALTDESLAIRKDGAKPDTPTTYVPFRNGIFISIAAALAEKEG 115

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYETWKLAQ 185
              + IG+ E D SGYPDC  D I  IE+A+N G        + TPL+ L K +  + + 
Sbjct: 116 AQALYIGIVEEDGSGYPDCTADFIGKIESAVNAGTSKDFSLRIVTPLVNLSKADIVRKSI 175

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           + G        LE + +CY  + +        C  C +C LR +G+    EK
Sbjct: 176 EAGS------PLELTWSCYEREDE-------ACGECDSCRLRLRGFELAGEK 214


>gi|317014059|gb|ADU81495.1| hypothetical protein HPGAM_03285 [Helicobacter pylori Gambia94/24]
          Length = 225

 Score =  151 bits (382), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 90/227 (39%), Positives = 140/227 (61%), Gaps = 8/227 (3%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            ++ FSGGQDS+T   WA  RF +V  + FDY Q++ VELEC   +   +     +    
Sbjct: 6   CVIGFSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECAQKIASLL-----QLPYE 60

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           +     L       +  +S         Q+ +LPN+FVP RN IF+    + A +LG +N
Sbjct: 61  IIPLDFLENITHSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKLGASN 120

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           I +GV + D+SGYPDC+ D I++IE A+NLG  + + + TPLM+L K + +++A+D+G  
Sbjct: 121 IALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKIVTPLMFLSKAQEFQMAKDLG-- 178

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            +++LI++E+HTCY G+R   + +GYGC+ CPAC LR+KG+ EF+ K
Sbjct: 179 -VLDLIIKETHTCYQGERKILHAYGYGCDECPACQLRKKGFEEFQAK 224


>gi|284006427|emb|CBA71663.1| conserved hypothetical protein [Arsenophonus nasoniae]
          Length = 239

 Score =  151 bits (382), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 88/239 (36%), Positives = 127/239 (53%), Gaps = 13/239 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D I     A+++FSGGQDS+TCL  A+ ++D V  ++F+Y QR+  E+     + +  
Sbjct: 1   MMDSIGMLKRAVIVFSGGQDSTTCLIQAIKQYDEVHCITFNYAQRHSTEIVVAQKICQHF 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                K  D      +L    +  ++  ++      K  ++ LPNTFVPGRNI+FL  AA
Sbjct: 61  NIKAHKILDVG----LLNELAISSLTRDNIPIPSYEKSSESELPNTFVPGRNILFLTLAA 116

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
             AY++    ++ GVCETD+SGYPDCR + ++A+  AI LG+   +   TPLMWL K ET
Sbjct: 117 IYAYQVQAEVVITGVCETDFSGYPDCRDEFVKALNQAICLGIAKAIRFETPLMWLNKAET 176

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           W LA           I  ++ TCY G        G GC  C AC+LR +G   +    Q
Sbjct: 177 WALAD---YYHSFEFIQNKTLTCYNGI------IGDGCQKCAACHLRAEGLKYYLNHRQ 226


>gi|183219600|ref|YP_001837596.1| hypothetical protein LEPBI_I0175 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189909739|ref|YP_001961294.1| PP-loop superfamily ATPase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|189038920|sp|B0S9S9|QUEC_LEPBA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764356|sp|B0SK77|QUEC_LEPBP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|167774415|gb|ABZ92716.1| PP-loop superfamily ATPase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167778022|gb|ABZ96320.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 248

 Score =  151 bits (382), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 79/245 (32%), Positives = 112/245 (45%), Gaps = 28/245 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-------DRVETLSFDYGQRNKVELECRLCVRKK 59
           +   A++L SGG DS+TCL  A   F         +  LSFDY Q++K+EL     + K 
Sbjct: 14  EKKGAIVLLSGGLDSTTCLYLAAKDFGYPKNKKLPLLALSFDYSQKHKIELTKSKKIAKT 73

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +   +      L     L  ++                  +  +PNT+VPGRNI+FL FA
Sbjct: 74  LG--IKHVIQKLDPGFFLGSSLTESKIKVRKNAKSLFSGDETEIPNTYVPGRNILFLSFA 131

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-------SHVTVHTPL 172
            +LA   G  +I IGV   DYSGYPDCR + I + +   NLG +         + + TPL
Sbjct: 132 LSLAEGHGYDSIYIGVNALDYSGYPDCRPEFIDSFQKMANLGTKKGVSGTGDSIQIKTPL 191

Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
           + L K E  +L   +G        L  +H+CY          G  C  C +C LR KG++
Sbjct: 192 LHLGKKEIIELGMSVGA------PLGLTHSCYDP------VSGKPCGKCDSCILRAKGFL 239

Query: 233 EFKEK 237
           E   K
Sbjct: 240 EVGLK 244


>gi|294055330|ref|YP_003548988.1| exsB protein [Coraliomargarita akajimensis DSM 45221]
 gi|293614663|gb|ADE54818.1| exsB protein [Coraliomargarita akajimensis DSM 45221]
          Length = 240

 Score =  151 bits (381), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 86/228 (37%), Gaps = 18/228 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++++SGG DS+  L         +  LS +YGQR+  ELE    +   +         
Sbjct: 2   KTVIIYSGGLDSTVLLYHLRAVGAELFALSVNYGQRHCCELERAAQICAVV-----DVPH 56

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            + +   +   + G    S           +  +  T VP RN+I L  A   A  +   
Sbjct: 57  QIADLSSVQSLLAGSSLTSPEIDVAEGHYTEETMKTTVVPNRNMILLALATGHALSVKAE 116

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
           ++       D++ YPDCR++   A+  A+ L   + V +  P +   K +  +   ++  
Sbjct: 117 SVAYAAHSGDHAIYPDCRNEFADAMAAAMALCDWNQVKLDRPFVDWTKADIVRRGAEL-- 174

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                +  E + +CY G           C  C  C  R++ +     +
Sbjct: 175 ----KVPFEMTWSCYKGGE-------VHCGKCGTCIERREAFDIAGVE 211


>gi|15645263|ref|NP_207433.1| hypothetical protein HP0639 [Helicobacter pylori 26695]
 gi|81341370|sp|O25356|QUEC_HELPY RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|2313760|gb|AAD07701.1| conserved hypothetical protein [Helicobacter pylori 26695]
          Length = 226

 Score =  151 bits (381), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 88/233 (37%), Positives = 141/233 (60%), Gaps = 8/233 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +    ++ FSGGQDS+T   WA  RF +V  + FDY Q++ VELEC   +   +     +
Sbjct: 2   EQKICVIGFSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECAQKIASLL-----Q 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +     L       +  +S         Q+ +LPN+FVP RN IF+    + A +L
Sbjct: 57  LPYEIIPLDFLENITRSALFKNSNDLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKL 116

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G +NI +GV + D+SGYPDC+ D I++IE A+NLG  + + + TPLM+L K + +++A+D
Sbjct: 117 GASNIALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKD 176

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           +G   +++L+++E+HTCY G+R   + +GYGC+ CPAC LR+KG+ EF+   +
Sbjct: 177 LG---VLDLVIKETHTCYQGERKILHAYGYGCDKCPACQLRKKGFEEFQANKK 226


>gi|77386124|gb|ABA77541.1| putative transcriptional regulatory protein [Campylobacter jejuni]
          Length = 224

 Score =  151 bits (381), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 69/239 (28%), Positives = 105/239 (43%), Gaps = 22/239 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +  AL + SGG DS+ C   A      +  L FDY  R +   E      K+I + +  
Sbjct: 1   MSKKALCIISGGMDSTLCAYLAKKEGYEIIALHFDYEPRTQ---EKERECFKQICKALKV 57

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            K  + +   +       ++  S+          +  P T+VP RN IFL  A +LA + 
Sbjct: 58  EKSYILDVSFIKDIGGNALTDKSIDIPKNELCISDTPPITYVPFRNGIFLSIAGSLAEKE 117

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG--MESHVTVHTPLMWLKKYETWKLA 184
              +I IGV E D SGYPDC  + I+  +  IN G      V + TPL+ L K +  +LA
Sbjct: 118 NCESIFIGVVEEDGSGYPDCTDEFIQKAQEFINEGTSKNFKVYIKTPLVRLNKAKIVELA 177

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM----EFKEKYQ 239
                    N+ LE + +CY  + +        C  C +C LR +G+     + K KY+
Sbjct: 178 LK------ENVPLELTWSCYESEDE-------ACGECDSCLLRLRGFEKVGFKDKIKYK 223


>gi|320540343|ref|ZP_08039995.1| putative aluminum resistance protein [Serratia symbiotica str.
           Tucson]
 gi|320029663|gb|EFW11690.1| putative aluminum resistance protein [Serratia symbiotica str.
           Tucson]
          Length = 232

 Score =  151 bits (381), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 89/229 (38%), Positives = 130/229 (56%), Gaps = 13/229 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL ++D V  ++FDYGQR+  E+     +   +     K  
Sbjct: 2   KRAVVIFSGGQDSTTCLIQALQQYDEVHCVTFDYGQRHHAEIAVAQELSLTLGAKAHKVL 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D      +L    +  ++  ++        Q N LP+TFVPGRNI+FL  AA  AY++  
Sbjct: 62  DVG----LLNELAISSLTRDNIPVPAYNLNQKNALPSTFVPGRNILFLTLAAIYAYQIAA 117

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++ GVCETD+SGYPDCR + I+A+  AI LG+  H+   TPLMWL K ETW LA    
Sbjct: 118 ETVITGVCETDFSGYPDCRDEFIKALNQAIVLGIARHIRFETPLMWLNKAETWALAD--- 174

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
               ++L+ +++ TCY G +      G GC  C AC+LR  G  +++  
Sbjct: 175 YYHQLDLVRQDTLTCYNGIK------GEGCGECAACHLRANGLAQYQLN 217


>gi|260581108|ref|ZP_05848929.1| queuosine biosynthesis protein queC [Haemophilus influenzae RdAW]
 gi|5853051|gb|AAD54291.1| HI1191 [Haemophilus influenzae]
 gi|260092237|gb|EEW76179.1| queuosine biosynthesis protein queC [Haemophilus influenzae RdAW]
          Length = 227

 Score =  151 bits (381), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 85/231 (36%), Positives = 140/231 (60%), Gaps = 23/231 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            A+++FSGGQDS+TCL  A+  +  + +E ++F YGQR+ +ELE    + + +       
Sbjct: 11  KAIVIFSGGQDSTTCLFQAIAEYGKENIEAITFQYGQRHAIELEKARTIAQDLG------ 64

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                +  ++  +++  I+H++L    A ++ ++N LPNTFV GRN +FL++AA  A   
Sbjct: 65  ----IKQTLIDTSVMKAITHNALMDEQAHIEQKENELPNTFVDGRNALFLLYAAIYAKGQ 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI +I+ GVCETD+SGYPDCR   I+++   +NL M+    + TPLM+L K +TW+LA +
Sbjct: 121 GIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLADE 180

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +G   +++ + + +HTCY G          GC  CP+C LR KG  ++  +
Sbjct: 181 LG---VLDYVQKHTHTCYEGIEG-------GCRKCPSCILRNKGLKKYLTQ 221


>gi|292670246|ref|ZP_06603672.1| transcription regulator ExsB [Selenomonas noxia ATCC 43541]
 gi|292648198|gb|EFF66170.1| transcription regulator ExsB [Selenomonas noxia ATCC 43541]
          Length = 232

 Score =  151 bits (381), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 69/240 (28%), Positives = 105/240 (43%), Gaps = 32/240 (13%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS TC++ A      +  +SFDY QR+  EL C   +          
Sbjct: 6   MGEKAVVLLSGGLDSCTCMAVADAAGHELYPVSFDYHQRHIRELSCAKKIA--------- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT----FVPGRNIIFLVFAATL 122
                  +H++    +  +  S+LT +     + +         +VP RN+IFL +A   
Sbjct: 57  -VHYHAAEHLIIETNMNAVGGSALTDDTIDVPEGDAQRTDIPATYVPARNLIFLSYALGY 115

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKK 177
           A R+G T++ IGV   DYSGYPDCR   I A + A +           + V TPL  L K
Sbjct: 116 AERVGATHLYIGVNSVDYSGYPDCRPAFIAAFQAAADAATAAAERGRRIIVETPLQSLSK 175

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            E  +L   +G         E + +CY G+ +        C  C +C LR +G+     +
Sbjct: 176 GEIIRLGTKLGA------PYELTTSCYRGEEE-------ACGVCDSCVLRLRGFAAAGRR 222


>gi|254779374|ref|YP_003057479.1| hypothetical protein HELPY_0732 [Helicobacter pylori B38]
 gi|254001285|emb|CAX29262.1| Conserved hypothetical protein, putative trans-regulatory protein
           [Helicobacter pylori B38]
          Length = 228

 Score =  151 bits (381), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 89/227 (39%), Positives = 140/227 (61%), Gaps = 8/227 (3%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            ++ FSGGQDS+T   WA  RF +V  + FDY Q++ VELEC   +   +     +    
Sbjct: 6   CVIGFSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECAQKIASLL-----QLPYE 60

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           +     L       +  +S         Q+ +LPN+FVP RN IF+    + A +LG +N
Sbjct: 61  IISLDFLENITRSALFKNSNDLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKLGASN 120

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           I +GV + D+SGYPDC+ D I++IE A+NLG  + + + TPLM+L K + +++A+D+G  
Sbjct: 121 IALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKIVTPLMFLSKAQEFQMAKDLG-- 178

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            +++L+++E+HTCY G+R   + +GYGC+ CPAC LR+KG+ EF+ K
Sbjct: 179 -VLDLVIKETHTCYQGERKILHAYGYGCDKCPACQLRKKGFEEFQAK 224


>gi|325578616|ref|ZP_08148716.1| transcription regulator ExsB [Haemophilus parainfluenzae ATCC
           33392]
 gi|325159852|gb|EGC71982.1| transcription regulator ExsB [Haemophilus parainfluenzae ATCC
           33392]
          Length = 225

 Score =  151 bits (380), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 91/230 (39%), Positives = 138/230 (60%), Gaps = 23/230 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
              AL++FSGGQDS+TCL  A+  +  + VET++F YGQR+ +ELE    + K +     
Sbjct: 9   NRKALVIFSGGQDSTTCLIQAIAEYGVENVETVTFQYGQRHSIELEKARWIAKDLG---- 64

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +  ++  +++  I+H++L   N  ++ +D  LPNTFV GRN +FL++AA  A 
Sbjct: 65  ------VKQTLIDTSVIKSITHNALMDANADIEQKDGELPNTFVDGRNALFLLYAAIYAK 118

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             GI +I+ GVCETD+SGYPDCR   I+++   +NL M+    + TPLM+L K +TW LA
Sbjct: 119 GQGINDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYPFNLKTPLMYLTKAQTWALA 178

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            ++G    ++ I + +HTCY G          GC  CP+C LR KG +E+
Sbjct: 179 DELGT---LDYIRQHTHTCYEGVEG-------GCRECPSCKLRDKGLLEY 218


>gi|320103234|ref|YP_004178825.1| preQ(0) biosynthesis protein QueC [Isosphaera pallida ATCC 43644]
 gi|319750516|gb|ADV62276.1| preQ(0) biosynthesis protein QueC [Isosphaera pallida ATCC 43644]
          Length = 246

 Score =  151 bits (380), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 62/235 (26%), Positives = 101/235 (42%), Gaps = 27/235 (11%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            ++L SGG DS+T L+ A+ ++     L+  YGQR+++E E    V +    +     + 
Sbjct: 19  VVVLLSGGLDSTTVLAEAVSKYSMPHALTIHYGQRHQIEREAARRVARAFNVVRHVELE- 77

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDN---NLPNTFVPGRNIIFLVFAATLAYRLG 127
                 + L   G  + +   +    +        +P T+VP RN IFL  A   A  +G
Sbjct: 78  ------VDLRAFGRSALTDDLEVPKDRSDTEIARGIPITYVPARNTIFLSLALAFAESIG 131

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES------HVTVHTPLMWLKKYETW 181
            T++ +GV   DYSGYPDCR + +RA E   NL  +          VH P +   K +  
Sbjct: 132 STDLFVGVNCVDYSGYPDCRPEYLRAFEALANLATKVGVEGTGRFRVHAPFLHATKADII 191

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           +   ++G      +    +H+CY          G  C  C +C LR   + +   
Sbjct: 192 RRGLELG------VDYSLTHSCYDPDD-----QGRACGRCDSCRLRLAAFRQVGR 235


>gi|145631240|ref|ZP_01787013.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae R3021]
 gi|144983167|gb|EDJ90662.1| predicted PP-loop superfamily ATPase [Haemophilus influenzae R3021]
          Length = 223

 Score =  151 bits (380), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 86/233 (36%), Positives = 141/233 (60%), Gaps = 23/233 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            A+++FSGGQDS+TCL  A+  +  + VE ++F YGQR+ +ELE    + + +       
Sbjct: 11  KAIVIFSGGQDSTTCLFQAIAEYGKENVEAITFQYGQRHAIELEKAFAIAQDLG------ 64

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                +  ++  +++  I+H++L    A ++ ++N LPNTFV GRN +FL++AA  A   
Sbjct: 65  ----IKQTLIDTSVMKAITHNALMDEQAHIEQKENELPNTFVDGRNALFLLYAAIYAKGQ 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI +I+ GVCETD+SGYPDCR   I+++   +NL M+    + TPLM+L K +TW+LA +
Sbjct: 121 GIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYQFNIKTPLMYLTKAQTWQLADE 180

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           +G   +++ + + +HTCY G          GC  CP+C LR KG  ++  + +
Sbjct: 181 LG---VLDYVQKHTHTCYEGIEG-------GCKKCPSCILRNKGLKKYLTQKR 223


>gi|261393104|emb|CAX50701.1| conserved hypothetical protein [Neisseria meningitidis 8013]
 gi|325133665|gb|EGC56322.1| exsB protein [Neisseria meningitidis M13399]
 gi|325143847|gb|EGC66162.1| exsB protein [Neisseria meningitidis M01-240013]
 gi|325206623|gb|ADZ02076.1| exsB protein [Neisseria meningitidis M04-240196]
          Length = 219

 Score =  151 bits (380), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 91/232 (39%), Positives = 142/232 (61%), Gaps = 23/232 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
              AL++FSGGQDS+TCL  A+  +  + V+ ++F YGQR+ VELE    + + +     
Sbjct: 3   NQKALVIFSGGQDSTTCLIQAIQIYGRENVQAITFQYGQRHAVELERASWIAQDLG---- 58

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +  +L L+++  I+H++L  +  A++  +N +PNTFV GRN +FL++AA  A 
Sbjct: 59  ------VKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNALFLLYAAIYAK 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             GI +I+ GVCETD+SGYPDCR   ++++   +NL M+    +HTPLM+L K +TW LA
Sbjct: 113 GQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            ++G    ++ I E++HTCY G          GC  CP+C LR++G  E+ E
Sbjct: 173 DEMGA---LDYIREQTHTCYNGIVG-------GCRECPSCILRERGLAEYLE 214


>gi|288575467|ref|ZP_05977006.2| ExsB protein [Neisseria mucosa ATCC 25996]
 gi|288567702|gb|EFC89262.1| ExsB protein [Neisseria mucosa ATCC 25996]
          Length = 255

 Score =  151 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 92/233 (39%), Positives = 143/233 (61%), Gaps = 23/233 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + P AL++FSGGQDS+TCL  A+  +  + V+ ++F YGQR+ VELE    + + +    
Sbjct: 38  QHPQALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELERARWIAQDLG--- 94

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                   +  +L L+++  I+H++L  +  A++   + LPNTFV GRN +FL++AA  A
Sbjct: 95  -------VKQTVLDLSLMQQITHNALMDDTAAIETASDGLPNTFVDGRNALFLLYAAIYA 147

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              GI +I+ GVCETD+SGYPDCR   ++++   +NL M+    +HTPLM+L K +TW L
Sbjct: 148 KGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYAFQIHTPLMYLTKAQTWAL 207

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           A  +G    ++ I E++HTCY G          GC+ CP+C LR++G  E+ E
Sbjct: 208 ADKMGA---LDYIREQTHTCYNGIVG-------GCHECPSCVLRERGLAEYLE 250


>gi|254804409|ref|YP_003082630.1| putative aluminum resistance protein [Neisseria meningitidis
           alpha14]
 gi|254667951|emb|CBA04189.1| putative aluminum resistance protein [Neisseria meningitidis
           alpha14]
          Length = 219

 Score =  151 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 91/232 (39%), Positives = 143/232 (61%), Gaps = 23/232 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
              AL++FSGGQDS+TCL  A+  +  + V+ ++F YGQR+ VELE    + + +     
Sbjct: 3   NQKALVIFSGGQDSTTCLIQAIQIYGRENVQAITFQYGQRHAVELERASWIAQDLG---- 58

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +  +L L+++  I+H++L  +  A++  +N +PNTFV GRN +FL++AA  A 
Sbjct: 59  ------VKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNALFLLYAAIYAK 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             GI +I+ GVCETD+SGYPDCR   ++++   +NL M+    +HTPLM+L K +TW LA
Sbjct: 113 GQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            ++G   +++ I E++HTCY G          GC  CP+C LR++G  E+ E
Sbjct: 173 DEMG---VLDYIREQTHTCYNGIVG-------GCRECPSCILRERGLAEYLE 214


>gi|161869451|ref|YP_001598618.1| aluminum resistance protein, putative [Neisseria meningitidis
           053442]
 gi|189038928|sp|A9M1Y9|QUEC_NEIM0 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|161595004|gb|ABX72664.1| aluminum resistance protein, putative [Neisseria meningitidis
           053442]
          Length = 220

 Score =  151 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 92/232 (39%), Positives = 143/232 (61%), Gaps = 22/232 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
              AL++FSGGQDS+TCL  A+  +  + V+ ++F YGQR+ VELE    + + +     
Sbjct: 3   NQQALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELERARWIAQDLG---- 58

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +  +L L+++  I+H++L  +  A++  +N +PNTFV GRN +FL++AA  A 
Sbjct: 59  ------IKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNALFLLYAAIYAK 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             GI +I+ GVCETD+SGYPDCR   ++++   +NL M+    +HTPLM+L K +TW LA
Sbjct: 113 GQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            ++G    ++ I E++HTCY G        G GC  CP+C LR++G  E+ E
Sbjct: 173 DEMGA---LDYIREQTHTCYNGIV------GGGCRECPSCILRERGLAEYLE 215


>gi|325203616|gb|ADY99069.1| exsB protein [Neisseria meningitidis M01-240355]
          Length = 219

 Score =  151 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 91/232 (39%), Positives = 142/232 (61%), Gaps = 23/232 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
              AL++FSGGQDS+TCL  A+  +  + V+ ++F YGQR+ VELE    + + +     
Sbjct: 3   NQKALVIFSGGQDSTTCLIQAIQIYGRENVQAITFQYGQRHAVELERARWIAQDLG---- 58

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +  +L L+++  I+H++L  +  A++  +N +PNTFV GRN +FL++AA  A 
Sbjct: 59  ------VKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNALFLLYAAIYAK 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             GI +I+ GVCETD+SGYPDCR   ++++   +NL M+    +HTPLM+L K +TW LA
Sbjct: 113 GQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            ++G    ++ I E++HTCY G          GC  CP+C LR++G  E+ E
Sbjct: 173 DEMGA---LDYIREQTHTCYKGIVG-------GCRECPSCILRERGLAEYLE 214


>gi|225873461|ref|YP_002754920.1| exsB protein [Acidobacterium capsulatum ATCC 51196]
 gi|254764291|sp|C1F844|QUEC_ACIC5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|225791467|gb|ACO31557.1| exsB protein [Acidobacterium capsulatum ATCC 51196]
          Length = 229

 Score =  151 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 68/233 (29%), Positives = 99/233 (42%), Gaps = 17/233 (7%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVE 62
           +  K   A++  SGG DS  C + A  R      + F YGQR +  EL     V +++  
Sbjct: 1   MTPKRERAVVCLSGGMDSCVCAAIA-ARDYEPYAIHFSYGQRTEARELVSARSVAERLG- 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                   +     +  + L D S                +P T+VP RN  FL  A + 
Sbjct: 59  FKDLLHLKIDLFRRIGGSALTDTSIDVPKAPAEEAAIGAEIPVTYVPFRNAHFLAAAVSW 118

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-HVTVHTPLMWLKKYETW 181
           A  LG + IVIG  E D SGYPDCR     A +  I  G +   + V TPL+ L+K E  
Sbjct: 119 AEVLGASKIVIGAVEQDSSGYPDCRPAYYEAFQHLIETGTKEGSIRVETPLIQLRKREIV 178

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           +L  ++G        L+ + +CY G  +        C  C +C LR + + E 
Sbjct: 179 RLGLELGA------PLDLTWSCYSGAEE-------ACGECESCVLRLRAFEEA 218


>gi|33241304|ref|NP_876246.1| PP-loop superfamily ATPase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
 gi|81663872|sp|Q7V9H8|QUEC_PROMA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|33238834|gb|AAQ00899.1| Predicted PP-loop superfamily ATPase [Prochlorococcus marinus
           subsp. marinus str. CCMP1375]
          Length = 227

 Score =  151 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 30/237 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +++ P  + L SGG DS+T  + A+++   V  LSFDYGQR+K ELE    +   +    
Sbjct: 3   LEERPKTIALLSGGLDSATATAIAIEQGHNVIGLSFDYGQRHKRELEAAKLLANHL---- 58

Query: 65  PKWKDSLGEDHILP--LAILGDISHSSLTKNVAMKIQ-DNNLPNTFVPGRNIIFLVFAAT 121
                 L E HI+   L+  G  S + L +++         +PNT+VPGRN +F+    +
Sbjct: 59  -----KLIEHHIIDINLSTWGGSSLTDLNESIPKTGVLPGVIPNTYVPGRNTVFIAIGLS 113

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLK 176
           LA       +V+G+   DYSGYPDCR D +   +   NL  +     + + +  PL+   
Sbjct: 114 LAEARNAKQLVLGINAMDYSGYPDCRPDYLDEFQKLANLASKAGREGNGIKLLAPLIHWN 173

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
           K +  + A  +      ++ ++ + +CY G  ++       C  C +C +R +    
Sbjct: 174 KIQIVQEALRL------DIPIDLTWSCYNGDTEE-------CGLCDSCRIRNEALQS 217


>gi|332968838|gb|EGK07885.1| transcription regulator ExsB [Kingella kingae ATCC 23330]
          Length = 226

 Score =  151 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 91/233 (39%), Positives = 144/233 (61%), Gaps = 23/233 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +    L++FSGGQDS+TCL  A+ ++  D V+ ++F YGQR+ +EL+    + +++  
Sbjct: 1   MTQNKRVLVIFSGGQDSTTCLIQAIAQYGKDHVQAMTFAYGQRHAIELQRATEIAQELG- 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAAT 121
                        +L L+++G I+H++L  + A ++ QDN LPNTFV GRN +FL++AA 
Sbjct: 60  ---------IAQTVLDLSLVGSITHNALMDSQARIQTQDNGLPNTFVDGRNALFLLYAAI 110

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            A    I +IVIGVCETD+SGYPDCR   I +++  + L M+    +HTPLM+L K +TW
Sbjct: 111 YAKSQQIHDIVIGVCETDFSGYPDCRQVFIDSMQQTLQLAMDYEFRLHTPLMYLTKKQTW 170

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            LA ++G    ++ +   +HTCY+G          GC+ CP+C LR++G  E+
Sbjct: 171 ALADELGA---LDFVRTRTHTCYMGVDG-------GCHECPSCVLRERGLQEY 213


>gi|188527512|ref|YP_001910199.1| ExsB trans-regulatory protein [Helicobacter pylori Shi470]
 gi|308182872|ref|YP_003926999.1| ExsB trans-regulatory protein [Helicobacter pylori PeCan4]
 gi|254764353|sp|B2UTI7|QUEC_HELPS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|188143752|gb|ACD48169.1| ExsB trans-regulatory protein [Helicobacter pylori Shi470]
 gi|297379840|gb|ADI34727.1| exsB protein [Helicobacter pylori v225d]
 gi|308065057|gb|ADO06949.1| ExsB trans-regulatory protein [Helicobacter pylori PeCan4]
          Length = 226

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 87/227 (38%), Positives = 138/227 (60%), Gaps = 8/227 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           + FSGGQDS+T   WA  RF +V  + FDY Q++ VELEC   +   +     +    + 
Sbjct: 8   ISFSGGQDSTTLAVWAKKRFKKVYLVGFDYAQKHSVELECAQKIASLL-----QLPYEII 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
               L       +  +S         Q+ +LPN+FVP RN IF+    + A ++G +NI 
Sbjct: 63  PLDFLENITHSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKIGASNIA 122

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
           +GV + D+SGYPDC+ D I++IE A+NLG  + + + TPLM+L K + +++A+D+G   +
Sbjct: 123 LGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKDLG---V 179

Query: 193 VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           ++L+++E+HTCY G+R   + +GYGC  CPAC LR+KG+ EF+   +
Sbjct: 180 LDLVIKETHTCYQGERKILHAYGYGCGECPACQLRKKGYEEFESNKK 226


>gi|154174066|ref|YP_001407913.1| ExsB protein [Campylobacter curvus 525.92]
 gi|189038901|sp|A7GXH1|QUEC_CAMC5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|112803412|gb|EAU00756.1| ExsB protein [Campylobacter curvus 525.92]
          Length = 223

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 67/232 (28%), Positives = 103/232 (44%), Gaps = 22/232 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR-LCVRKKIVELMPKW 67
             A+ + SGG DS+ C   A      +  L FDY QR     +     +   +       
Sbjct: 2   KKAVCIMSGGMDSTLCAVMAKREGYEIIALHFDYEQRTMRREKMAFEQICDYLGIKKRLN 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D      +  +A +G  + +     V+     + +PNT+VP RN IF+  AA LA + G
Sbjct: 62  LD------VSFIADIGGNALTDKNLAVSKSGLGDEIPNTYVPFRNGIFISIAAALAEKEG 115

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG--MESHVTVHTPLMWLKKYETWKLAQ 185
              I IGV E D SGYPDC+ + I  +  AIN+G   E+ + + TPL+ L K +    + 
Sbjct: 116 AQAIYIGVVEEDSSGYPDCKGEFIERMNAAINVGTAPETKIKIVTPLVNLSKADIVAKSL 175

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           + G        LE + +CY  + +        C  C +C LR +G+     K
Sbjct: 176 EFGS------PLELTWSCYEREDE-------ACGLCDSCRLRLRGFERAGVK 214


>gi|325283488|ref|YP_004256029.1| exsB protein [Deinococcus proteolyticus MRP]
 gi|324315297|gb|ADY26412.1| exsB protein [Deinococcus proteolyticus MRP]
          Length = 233

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 63/240 (26%), Positives = 101/240 (42%), Gaps = 27/240 (11%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M +     P A++L SGG DSST L  A+        LSF YGQR+ VELE    +    
Sbjct: 1   MTETT--NPRAVVLLSGGLDSSTVLGLAVRSGLEATALSFRYGQRHTVELERAAQIAAHF 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                    ++G       +  G                D  +P T+VPGRN +F+    
Sbjct: 59  GAAHRVVDINIG-------SFGGSALTDEGLAVPQEATPDGVIPPTYVPGRNTVFIAVGL 111

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWL 175
           +LA  +   ++ +G+   DYSGYPDCR D + A +T  +L            +  PL+ +
Sbjct: 112 SLAEAIDAGSLHLGITAVDYSGYPDCRPDYLAAYQTLADLATVAGREGRGARLVAPLLEM 171

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K +  + A ++G      + +  + +CY G  +        C  C +C +R +  +   
Sbjct: 172 SKVDIVRTALEVG------VPVHLTWSCYSGGSEP-------CGLCDSCRIRDEALLSAG 218


>gi|87122357|ref|ZP_01078238.1| putative regulator protein [Marinomonas sp. MED121]
 gi|86162332|gb|EAQ63616.1| putative regulator protein [Marinomonas sp. MED121]
          Length = 221

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 55/243 (22%), Positives = 95/243 (39%), Gaps = 33/243 (13%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            A  A++++SGG DS T L  AL   D +  +SF+YGQ++  EL     V +++      
Sbjct: 1   MANKAVVVYSGGMDSYTVLHKALSENDEIYAISFNYGQKHNKELIIAAQVCQELN----- 55

Query: 67  WKDSLGEDHILPLAILGDISHSSLTK------NVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                    ++ +  +  +   S               +D N+ +T VP RN++ +  A 
Sbjct: 56  -----IPHKVVDITAINSLMAGSSLTLDSDEAIPEGDYEDANMKSTVVPNRNMVLISMAI 110

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
             A  L  + +  G    D+  YPDCR + + A+     +     V +  P +   K E 
Sbjct: 111 AYAVSLEASKVYYGAHSGDHDIYPDCRPEFVEAMNAVSLIANYQAVEIIAPFLKSSKAEI 170

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME----FKE 236
                       +NL   ++ TCY G+          C  C +C  R   + +       
Sbjct: 171 LASG------LAMNLDYSKTWTCYNGREK-------ACGKCGSCLERLASFKQHNLIDPI 217

Query: 237 KYQ 239
           KY+
Sbjct: 218 KYE 220


>gi|317054937|ref|YP_004103404.1| exsB protein [Ruminococcus albus 7]
 gi|315447206|gb|ADU20770.1| exsB protein [Ruminococcus albus 7]
          Length = 228

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 97/231 (41%), Gaps = 18/231 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            AL+LFSGG DS+TCL+ A+ +   + V  LS  YGQ++  E++    V +     +   
Sbjct: 2   KALVLFSGGLDSATCLALAIKKHGKENVTALSVFYGQKHDKEIQAAKNVAEYYGVTLKTL 61

Query: 68  KDSLG-EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +L   D    L    D      +    +   D    +T+VP RN +FL  AA++A  L
Sbjct: 62  DLALIFADSDCSLLSNSDKDIPHESYAEQLSHTDGKPVSTYVPFRNGLFLASAASIAISL 121

Query: 127 GITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
               I  G    D +G  YPDC      A+ +AI +G    V +  P + L K +  K+ 
Sbjct: 122 DCGVIYYGAHADDAAGNAYPDCSQAFNNAMNSAITIGSGEQVHIEAPFVGLTKADVVKMG 181

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            ++G      +  E + +CY G           C  C  C  R   +    
Sbjct: 182 TELG------VPYELTWSCYEGGEKP-------CGVCGTCIDRTAAFEANG 219


>gi|332673487|gb|AEE70304.1| transcription regulator ExsB [Helicobacter pylori 83]
          Length = 226

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 87/229 (37%), Positives = 139/229 (60%), Gaps = 8/229 (3%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            ++ FSGGQDS+T   WA  RF +V  + FDY Q++ VELEC   +   +     +    
Sbjct: 6   CVISFSGGQDSTTLAVWAKKRFKKVYLVGFDYVQKHFVELECAQKIASLL-----QLPYE 60

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           +     L       +  +S         Q+ +LPN+FVP RN IF+    + A ++G +N
Sbjct: 61  IIPLDFLENITHSALFKNSNDLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKIGASN 120

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           I +GV + D+SGYPDC+ D I++IE A+NLG  + + + TPLM+L K + +++A+D+G  
Sbjct: 121 IALGVSQADFSGYPDCKEDFIKSIENALNLGSNTAIKILTPLMFLNKAQEFQMAKDLGA- 179

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
             ++L+++E+HTCY G+R   + +GYGC+ CPAC LR+KG+ EF+   +
Sbjct: 180 --LDLVIKETHTCYQGERKILHAYGYGCDECPACQLRKKGYEEFESNQK 226


>gi|322369254|ref|ZP_08043819.1| exsB protein [Haladaptatus paucihalophilus DX253]
 gi|320550986|gb|EFW92635.1| exsB protein [Haladaptatus paucihalophilus DX253]
          Length = 256

 Score =  150 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 55/235 (23%), Positives = 95/235 (40%), Gaps = 24/235 (10%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELM 64
           +    A++L SGG DS+T    A +R      L   YGQR +  E +C      ++    
Sbjct: 30  RPEKRAVILASGGMDSATAAYEARERGYEPFFLHTSYGQRTESKEFDCAKRQADELNAGF 89

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKI-QDNNLPNTFVPGRNIIFLVFAATLA 123
              + S        LA +G  S +     V     + + +P+T+VP RN   L  A + A
Sbjct: 90  LHVETS-------HLAKIGGSSLTDDEMTVEDADLESDEVPDTYVPFRNANLLSMAVSCA 142

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH--TPLMWLKKYETW 181
                  + IG    D+SGYPDCR     A +  ++ G +   ++    P +   K +  
Sbjct: 143 EANDCDAVFIGAHSEDFSGYPDCRPQFFEAFQAVVDTGTKDDTSIELVAPFVEFSKTDIA 202

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           +   ++      ++  E + +CY  +          C +C +C LR + +    E
Sbjct: 203 ERGVEL------DVPYELTWSCYRAEEP-------ACGTCDSCALRLQAFQNVGE 244


>gi|223039865|ref|ZP_03610149.1| ExsB protein [Campylobacter rectus RM3267]
 gi|222878874|gb|EEF13971.1| ExsB protein [Campylobacter rectus RM3267]
          Length = 223

 Score =  150 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 70/232 (30%), Positives = 104/232 (44%), Gaps = 22/232 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKW 67
             A+ + SGG DS+ C   A      +  L FDYGQR  + E      + ++I  L    
Sbjct: 2   KKAVCIMSGGMDSTLCAVLAKRAGYEIVALHFDYGQRTMEREKLAFEQICERIGALKKV- 60

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +L    I   A +G  + +     +       + P+T+VP RN IF+  AA LA + G
Sbjct: 61  --NLDAHFI---ASIGGNALTDENLAIRKDGAKPDTPSTYVPFRNGIFISIAAALAEKEG 115

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYETWKLAQ 185
              + IG+ E D SGYPDC  D I  IE+A+N G        + TPL+ L K    + + 
Sbjct: 116 AQALYIGIVEEDGSGYPDCTADFIAKIESAVNAGTSKDFSLRIETPLVNLSKAGIVRKSL 175

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           + G        LE + +CY  + +        C  C +C LR +G+    EK
Sbjct: 176 EAGS------PLELTWSCYELEDE-------ACGECDSCRLRLRGFELAGEK 214


>gi|193215202|ref|YP_001996401.1| exsB protein [Chloroherpeton thalassium ATCC 35110]
 gi|254764322|sp|B3QS09|QUEC_CHLT3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|193088679|gb|ACF13954.1| exsB protein [Chloroherpeton thalassium ATCC 35110]
          Length = 226

 Score =  150 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 91/230 (39%), Gaps = 19/230 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DS    + A      +  L  +YGQR +          +KI +     + 
Sbjct: 2   RAVVLLSGGMDSLVTTAIAAHLGYELAALHINYGQRTEKRELVA---FQKICDFYRIERR 58

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                  L L     ++  ++    A          ++V  RN   L  A + A  +G  
Sbjct: 59  LEINFEHLSLIGGSSLTDLAMPVTTAKLHSKEIP-TSYVAFRNANMLSVAVSWAEVIGAN 117

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLG--MESHVTVHTPLMWLKKYETWKLAQDI 187
            I IG  + D SGYPDCR +  +A    I  G   ++ + + TP++ LKK+E      ++
Sbjct: 118 KIFIGAVDEDSSGYPDCRVNFFQAFNELIKHGTKPDTRIEIQTPVISLKKWEIVIKGMEL 177

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                  +  E S +CY  +          C  C +C LR + + +   +
Sbjct: 178 ------EVPFEHSWSCYKSE-------HVACGVCDSCALRLRAFEQAGIR 214


>gi|254525807|ref|ZP_05137859.1| exsB protein [Prochlorococcus marinus str. MIT 9202]
 gi|221537231|gb|EEE39684.1| exsB protein [Prochlorococcus marinus str. MIT 9202]
          Length = 224

 Score =  150 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 77/237 (32%), Positives = 112/237 (47%), Gaps = 26/237 (10%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  K  S ++L SGG DSST    A     ++  LSFDYGQR+K EL     + K     
Sbjct: 1   MTLKNKSIVVLLSGGLDSSTVTGIAKKSEAKIFGLSFDYGQRHKKELYSASIIAKHFNIE 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATL 122
             K          L L++ G  S +   KN+    +Q N +PNT+VPGRN IF+  A + 
Sbjct: 61  EFKI-------IKLDLSLWGGSSLTDTQKNIPLEGVQTNKIPNTYVPGRNTIFISVALSY 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTPLMWLKK 177
           A  +    I +GV   DYSGYPDCR D I+  +   +L        + + + TPL+ L K
Sbjct: 114 AEAINADFIGLGVNALDYSGYPDCRPDYIKKFQELADLANKRGRENNPIKLWTPLLDLNK 173

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            E  KLA         ++ LE++ +CY G           C  C +C +R   + ++
Sbjct: 174 EEIIKLAYA------NHVPLEKTWSCYSGNSKP-------CGKCDSCRIRNDAYEKW 217


>gi|291276559|ref|YP_003516331.1| queuosine biosynthesis protein [Helicobacter mustelae 12198]
 gi|290963753|emb|CBG39588.1| Putative queuosine biosynthesis protein [Helicobacter mustelae
           12198]
          Length = 231

 Score =  150 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 88/230 (38%), Positives = 135/230 (58%), Gaps = 18/230 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L++FSGGQDS+T  +WA   F  VE L+FDY Q++++EL+    + +K+         
Sbjct: 3   KCLVVFSGGQDSTTVAAWAKKEFSSVELLAFDYQQKHRIELQQARKIAEKLE-------- 54

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT-----FVPGRNIIFLVFAATLAY 124
              + +++ L  L  I+ S+L       +   +  +      FVP RN +FL  A   A 
Sbjct: 55  --LKLNMIVLDFLAQIADSALFAKSIENLSTKHKTHQDLLASFVPNRNGLFLTIAHAFAQ 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++   +I IGV E DYSGYPDCR + I A+E+A+N G ++ + +HTPL  + K E + LA
Sbjct: 113 KIHANHIAIGVSEQDYSGYPDCREEFITAMESALNKGAQTQIKIHTPLSHMSKAEEFLLA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           Q++G   ++ +ILE+SHTCY G R+ R+ WGYGC  C AC LR+  + +F
Sbjct: 173 QNLG---VLEMILEDSHTCYEGVRESRHAWGYGCGICAACILRKNAYEKF 219


>gi|15676432|ref|NP_273570.1| putative aluminum resistance protein [Neisseria meningitidis MC58]
 gi|81784948|sp|Q9K0Q9|QUEC_NEIMB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|7225750|gb|AAF40955.1| putative aluminum resistance protein [Neisseria meningitidis MC58]
 gi|316985378|gb|EFV64326.1| queuosine biosynthesis protein queC [Neisseria meningitidis H44/76]
 gi|325139740|gb|EGC62274.1| exsB protein [Neisseria meningitidis CU385]
 gi|325200787|gb|ADY96242.1| exsB protein [Neisseria meningitidis H44/76]
          Length = 219

 Score =  150 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 91/232 (39%), Positives = 143/232 (61%), Gaps = 23/232 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
              AL++FSGGQDS+TCL  A+  +  + V+ ++F YGQR+ VELE    + + +     
Sbjct: 3   NQQALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELERARWIAQDLG---- 58

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +  +L L+++  I+H++L  +  A++  +N +PNTFV GRN +FL++AA  A 
Sbjct: 59  ------VKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNALFLLYAAIYAK 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             GI +I+ GVCETD+SGYPDCR   ++++   +NL M+    +HTPLM+L K +TW LA
Sbjct: 113 GQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            ++G   +++ I E++HTCY G          GC  CP+C LR++G  E+ E
Sbjct: 173 DEMG---VLDYIREQTHTCYNGIVG-------GCRECPSCILRERGLAEYLE 214


>gi|317012455|gb|ADU83063.1| trans-regulatory protein ExsB [Helicobacter pylori Lithuania75]
          Length = 228

 Score =  150 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 88/228 (38%), Positives = 139/228 (60%), Gaps = 8/228 (3%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            ++ FSGGQDS+T   WA  RF +V  + FDY Q++ VELEC   +   +     +    
Sbjct: 6   CVISFSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECAQKIASLL-----QLPYE 60

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           +     L       +  +S         Q+ +LPN+FVP RN IF+    + A +LG +N
Sbjct: 61  IISLDFLENITRSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKLGASN 120

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           I +GV + D+SGYPDC+   I++IE A+NLG  + + + TPLM+L K + +++A+D+G  
Sbjct: 121 IALGVSQADFSGYPDCKEYFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKDLG-- 178

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
            +++L+++E+HTCY G+R   + +GYGC+ CPAC LR+KG+ EF+ K 
Sbjct: 179 -VLDLVIKETHTCYQGERKILHAYGYGCDECPACQLRKKGYEEFQTKV 225


>gi|238926261|ref|ZP_04658021.1| trans-regulatory protein ExsB [Selenomonas flueggei ATCC 43531]
 gi|238885941|gb|EEQ49579.1| trans-regulatory protein ExsB [Selenomonas flueggei ATCC 43531]
          Length = 228

 Score =  150 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 63/236 (26%), Positives = 100/236 (42%), Gaps = 27/236 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS TC++ A      +  +SF+Y QR+  EL+    +          
Sbjct: 1   MGERAVILLSGGLDSCTCMAIAHAAGQELYPISFNYHQRHSRELDAARSIAAHYHAAEHL 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL-PNTFVPGRNIIFLVFAATLAYR 125
             ++        +  +G  + +    +V     +    P T+VP RN+IFL +A   A R
Sbjct: 61  IIET-------NMDAIGGSALTDSAIDVPQGNAERTDIPVTYVPARNLIFLSYALGYAER 113

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME------SHVTVHTPLMWLKKYE 179
           +G  ++ IGV   DYSGYPDCR + I A + A +            + + TPL  L K E
Sbjct: 114 VGAAHVYIGVNSVDYSGYPDCRPEFIAAFQRAADAATAASAEDGRRIVIETPLQHLSKGE 173

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
                 ++      +     + +CY G           C  C +C LR +G+ E  
Sbjct: 174 IILRGDEL------DAPYALTTSCYRGG-------TVACGVCDSCLLRLRGFAEAG 216


>gi|15611649|ref|NP_223300.1| hypothetical protein jhp0582 [Helicobacter pylori J99]
 gi|81555414|sp|Q9ZLJ7|QUEC_HELPJ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|4155143|gb|AAD06173.1| putative [Helicobacter pylori J99]
          Length = 225

 Score =  150 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 89/226 (39%), Positives = 139/226 (61%), Gaps = 8/226 (3%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            ++ FSGGQDS+T   WA  RF +V  + FDY Q++ VELEC   +   +     +    
Sbjct: 6   CVIGFSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECAQKIASLL-----QLPYE 60

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           +     L       +  +S         Q+ +LPN+FVP RN IF+    + A +LG +N
Sbjct: 61  IIPLDFLENITHSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKLGASN 120

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           I +GV + D+SGYPDC+ D I++IE A+NLG  + + + TPLM+L K + +++A+D+G  
Sbjct: 121 IALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKIVTPLMFLSKAQEFQMAKDLG-- 178

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            +++LI++E+HTCY G+R   + +GYGC+ CPAC LR+KG+ EF+ 
Sbjct: 179 -VLDLIIKETHTCYQGERKILHAYGYGCDKCPACQLRKKGFEEFQA 223


>gi|261839533|gb|ACX99298.1| PP family ATPase [Helicobacter pylori 52]
          Length = 226

 Score =  150 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 88/224 (39%), Positives = 137/224 (61%), Gaps = 8/224 (3%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            ++ FSGGQDS+T   WA  RF +V  + FDY Q++ VELEC   +   +     +    
Sbjct: 6   CVISFSGGQDSTTLAVWAKKRFKKVYLVGFDYAQKHSVELECAQKIASLL-----QLPYE 60

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           +     L       +  +S         Q+ +LPN+FVP RN IF+    + A ++G +N
Sbjct: 61  IIPLDFLENITHSALFKNSNDLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKIGASN 120

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           I +GV + D+SGYPDC+ D I++IE A+NLG  + + + TPLM+L K + +++A+D+G  
Sbjct: 121 IALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKDLGA- 179

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
             ++LI++E+HTCY G+R   + +GYGC+ CPAC LR+KG+ EF
Sbjct: 180 --LDLIIKETHTCYQGERKILHAYGYGCDKCPACQLRKKGYEEF 221


>gi|33862247|ref|NP_893808.1| ATPase [Prochlorococcus marinus subsp. pastoris str. CCMP1986]
 gi|81575506|sp|Q7UZH5|QUEC_PROMP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|33634465|emb|CAE20150.1| hypothetical ATPase [Prochlorococcus marinus subsp. pastoris str.
           CCMP1986]
          Length = 224

 Score =  150 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 80/237 (33%), Positives = 120/237 (50%), Gaps = 26/237 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SA++L SGG DSST    A     ++  LSFDYGQR+K EL+    +         K
Sbjct: 4   KNKSAVILLSGGLDSSTVTGLAKASKAKIFGLSFDYGQRHKKELDSAFTIANHFEIEEFK 63

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                     L L++ G  S + + K++ +  IQ N +PNT+VPGRN IF+  A + A  
Sbjct: 64  IVK-------LDLSLWGGSSLTDIKKDLPIDGIQQNTIPNTYVPGRNTIFISVALSYAEA 116

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYET 180
           +    I +GV   DYSGYPDCR D I+  +   NL  +     + + + TPL+ L K + 
Sbjct: 117 INADLIGLGVNALDYSGYPDCRPDYIKKFQELANLANKRGREENPIKLWTPLLDLNKEDI 176

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            +LA D       N+ LE++ +CY G  +        C  C +C +RQ  + +++ K
Sbjct: 177 IQLAFD------NNVPLEKTWSCYSGNLEP-------CGKCDSCRIRQTAYKKWQIK 220


>gi|300712359|ref|YP_003738173.1| exsB protein [Halalkalicoccus jeotgali B3]
 gi|299126042|gb|ADJ16381.1| exsB protein [Halalkalicoccus jeotgali B3]
          Length = 222

 Score =  150 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 94/230 (40%), Gaps = 22/230 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKWKD 69
           A++L SGG DS+T    A +    +  L   YGQR +  E +C   + +++         
Sbjct: 4   AVILLSGGMDSATAAYEARETGYEIAALHTSYGQRTEGKEYDCAHWLAEELDAA------ 57

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                    LA +G  S +  +  V    +   +P+T+VP RN   L  A + A   G  
Sbjct: 58  DFLHIETDHLAAIGGSSLTDESMAVGDASEGEEIPDTYVPFRNANLLSMAVSYAEARGAE 117

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKLAQDI 187
            I IG    D++GYPDCR     A +  ++ G +    + +  P +   K E  +   ++
Sbjct: 118 AIYIGAHSEDFAGYPDCRPAFFEAFQGVVDTGTKPETEIGIEAPYVEYSKTEIAERGLEL 177

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           G      +  E + +CY             C +C +C  R++ +     +
Sbjct: 178 G------VPYEHTWSCYR-------NEAPACGTCDSCTYRREAFERAGSE 214


>gi|126697220|ref|YP_001092106.1| ATPase [Prochlorococcus marinus str. MIT 9301]
 gi|167016442|sp|A3PFI0|QUEC_PROM0 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|126544263|gb|ABO18505.1| hypothetical ATPase [Prochlorococcus marinus str. MIT 9301]
          Length = 224

 Score =  150 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 76/237 (32%), Positives = 114/237 (48%), Gaps = 26/237 (10%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  K  S ++L SGG DSST    A     ++  LSFDYGQR+K EL     + K     
Sbjct: 1   MNLKNKSIVVLLSGGLDSSTVTGIAKKSEAKIFGLSFDYGQRHKKELNSASIIAKHFDIE 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATL 122
             K          L L++ G  S +   KN+ ++ +Q N +PNT+VPGRN IF+  A + 
Sbjct: 61  EFKI-------IKLDLSLWGGSSLTDSQKNIPIEGVQANKIPNTYVPGRNTIFISVALSY 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTPLMWLKK 177
           A  +    I +GV   DYSGYPDCR D I+  +   +L        + + + TPL+ L K
Sbjct: 114 AEAIDADFIGLGVNALDYSGYPDCRPDYIKKFQELADLANKRGRENNPIKLWTPLLDLNK 173

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            E  KLA D       ++  +++ +CY G           C  C +C +R   + ++
Sbjct: 174 EEIIKLAFD------NHVPFDKTWSCYSGNSKP-------CGKCDSCRIRNAAYEKW 217


>gi|261403835|ref|YP_003248059.1| exsB protein [Methanocaldococcus vulcanius M7]
 gi|261370828|gb|ACX73577.1| exsB protein [Methanocaldococcus vulcanius M7]
          Length = 232

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 52/239 (21%), Positives = 96/239 (40%), Gaps = 26/239 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWK 68
            A+ + SGG DS+     A DR   +  ++F+YGQ+  K E+     + + +        
Sbjct: 2   KAITVLSGGLDSTVATLIAKDRGYEMTAITFNYGQKAVKREINSAKKICEILG------- 54

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMK----------IQDNNLPNTFVPGRNIIFLVF 118
               +  ++ L  +     SSL     +              + +   +VP RN+I    
Sbjct: 55  ---IKHIVVDLPFVKQFGKSSLITEKEIPTLKMNELDSEKAFDTMRAVWVPARNVIMFSI 111

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
           A+  A  LG   I IG+ + +   +PD   + + A    +  G  + V +  PL    K 
Sbjct: 112 ASGFAESLGAEKIFIGINKEEGITFPDNTIEFVEAFNRVLEYGTLNKVKIEAPLYDKTKE 171

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           E  KL  ++  +  V + L+ S++CY        E    C  C +C  R++ ++    +
Sbjct: 172 EIVKLGAELEKKLGVEV-LKYSYSCY----HDNGEDFLHCGKCESCMRRKRAFLNAGVE 225


>gi|154149359|ref|YP_001406321.1| ExsB protein [Campylobacter hominis ATCC BAA-381]
 gi|189038903|sp|A7I1D0|QUEC_CAMHC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|153805368|gb|ABS52375.1| ExsB protein [Campylobacter hominis ATCC BAA-381]
          Length = 220

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 77/235 (32%), Positives = 109/235 (46%), Gaps = 29/235 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWK 68
            A+ + SGG DSST    A ++   +  L FDY QR  K E EC   +   +     +  
Sbjct: 2   KAVCVISGGMDSSTAAFIAKEQGYEILALHFDYNQRTMKKERECFNLICDDLGVKSRE-- 59

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  IL ++ +  I  +SLT          ++   +PNT+VP RN IFL  AA  A 
Sbjct: 60  -------ILDVSFIAQIGANSLTDKNLTIQKTGVKSGEIPNTYVPFRNGIFLSVAAAFAE 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYETWK 182
           + G   + IGV E D SGYPDC  + I+ IE+AIN G   +    +  PL+ L K +  K
Sbjct: 113 KEGADALFIGVVEEDSSGYPDCSENFIKKIESAINAGTSPNFKLEIKIPLVHLSKTQIVK 172

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            A +IG      + LE + +CY  +          C  C +C LR KG+     K
Sbjct: 173 KALEIG------VPLEHTWSCYEREDK-------ACGFCDSCRLRLKGFKGADTK 214


>gi|240013446|ref|ZP_04720359.1| YbaX [Neisseria gonorrhoeae DGI18]
 gi|240080025|ref|ZP_04724568.1| YbaX [Neisseria gonorrhoeae FA19]
 gi|240112235|ref|ZP_04726725.1| YbaX [Neisseria gonorrhoeae MS11]
 gi|240114978|ref|ZP_04729040.1| YbaX [Neisseria gonorrhoeae PID18]
 gi|240120517|ref|ZP_04733479.1| YbaX [Neisseria gonorrhoeae PID24-1]
 gi|240125011|ref|ZP_04737897.1| YbaX [Neisseria gonorrhoeae SK-92-679]
 gi|240127524|ref|ZP_04740185.1| YbaX [Neisseria gonorrhoeae SK-93-1035]
 gi|260441207|ref|ZP_05795023.1| YbaX [Neisseria gonorrhoeae DGI2]
 gi|268596169|ref|ZP_06130336.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae FA19]
 gi|268598293|ref|ZP_06132460.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae MS11]
 gi|268600646|ref|ZP_06134813.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae PID18]
 gi|268683597|ref|ZP_06150459.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae
           SK-92-679]
 gi|268685900|ref|ZP_06152762.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae
           SK-93-1035]
 gi|291044541|ref|ZP_06570250.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|268549957|gb|EEZ44976.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae FA19]
 gi|268582424|gb|EEZ47100.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae MS11]
 gi|268584777|gb|EEZ49453.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae PID18]
 gi|268623881|gb|EEZ56281.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae
           SK-92-679]
 gi|268626184|gb|EEZ58584.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae
           SK-93-1035]
 gi|291011435|gb|EFE03431.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
          Length = 219

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 91/229 (39%), Positives = 140/229 (61%), Gaps = 23/229 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
              AL++FSGGQDS+TCL  A+  +  + V+ ++F YGQR+ VELE    + + +     
Sbjct: 3   NQKALVIFSGGQDSTTCLIQAIQTYGRENVQAITFRYGQRHAVELERAEWIAQDLG---- 58

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +  +L L+++  I+H++L     A++  DN +PNTFV GRN +FL++AA  A 
Sbjct: 59  ------VKQTVLDLSLMRQITHNALMDETAAIETADNGVPNTFVDGRNALFLLYAAIFAK 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             GI +I+ GVCETD+SGYPDCR   ++++   +NL M+    +HTPLM+L K +TW LA
Sbjct: 113 GQGIRHIIAGVCETDFSGYPDCRGVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
            ++G   +++ I E++HTCY G          GC  CP+C LR++G  E
Sbjct: 173 DEMG---VLDYIREQTHTCYKGIVG-------GCRECPSCILRERGLAE 211


>gi|240015885|ref|ZP_04722425.1| YbaX [Neisseria gonorrhoeae FA6140]
 gi|240117262|ref|ZP_04731324.1| YbaX [Neisseria gonorrhoeae PID1]
 gi|268602958|ref|ZP_06137125.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae PID1]
 gi|268587089|gb|EEZ51765.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae PID1]
          Length = 219

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 90/229 (39%), Positives = 140/229 (61%), Gaps = 23/229 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
              AL++FSGGQDS+TCL  A+  +  + V+ ++F YGQR+ VELE    + + +     
Sbjct: 3   NQKALVIFSGGQDSTTCLIQAIQTYGRENVQAITFRYGQRHAVELERAEWIAQDLG---- 58

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +  +L L+++  I+H++L  +  A++  DN +PNTFV GRN +FL++AA  A 
Sbjct: 59  ------VKQTVLDLSLMRQITHNALMDDTAAIETADNGVPNTFVDGRNALFLLYAAIFAK 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             GI +I+ GVCETD+SGYPDCR   ++++   +NL M+    + TPLM+L K +TW LA
Sbjct: 113 GQGIRHIIAGVCETDFSGYPDCRGVFVKSMNVTLNLAMDYDFQIQTPLMYLTKAQTWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
            ++G   +++ I E++HTCY G          GC  CP+C LR++G  E
Sbjct: 173 DEMG---VLDYIREQTHTCYKGIVG-------GCRECPSCILRERGLAE 211


>gi|209527869|ref|ZP_03276358.1| exsB protein [Arthrospira maxima CS-328]
 gi|209491672|gb|EDZ92038.1| exsB protein [Arthrospira maxima CS-328]
          Length = 226

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 75/239 (31%), Positives = 105/239 (43%), Gaps = 37/239 (15%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLC-------VRKKIVE 62
            A++L SGG DSST L  A         LSF+Y QR+  ELE              ++VE
Sbjct: 2   KAVILLSGGLDSSTVLYQAKADGCECYALSFNYQQRHLRELEAAAKIAEAAGVAAHQVVE 61

Query: 63  L-MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
             + +W  S   DH + L     ++  S T  +            +VP RN IFL  A  
Sbjct: 62  FDLKRWGGSALTDHNIDLPCDRTLAEMSATIPIT-----------YVPARNTIFLSLALA 110

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLK 176
               +G   I IGV   DYSGYPDCR D I A+++   LG +       +T++TPL+ LK
Sbjct: 111 YGETIGADRIYIGVNALDYSGYPDCRPDYIAAMQSVFRLGTKQGREGNAITINTPLIDLK 170

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           K +  +L   +G      +  E + +CY G+          C  C AC LR   +    
Sbjct: 171 KTDIIQLGNSLG------VPWEYTWSCYGGE-------AQACGVCDACRLRLAAFEALG 216


>gi|167757165|ref|ZP_02429292.1| hypothetical protein CLORAM_02715 [Clostridium ramosum DSM 1402]
 gi|237735747|ref|ZP_04566228.1| succinoglycan biosynthesis regulator [Mollicutes bacterium D7]
 gi|167703340|gb|EDS17919.1| hypothetical protein CLORAM_02715 [Clostridium ramosum DSM 1402]
 gi|229381492|gb|EEO31583.1| succinoglycan biosynthesis regulator [Coprobacillus sp. D7]
          Length = 227

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 65/237 (27%), Positives = 97/237 (40%), Gaps = 26/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+LFSGG DS+T L+ A+     D V  LS  YGQ++  E+E    V  KI +     
Sbjct: 2   KVLVLFSGGVDSTTALALAIQEHGKDNVVALSISYGQKHTKEIE----VANKIAQFYQVE 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQ-----DNNLPNTFVPGRNIIFLVFAATL 122
              L    I   +    + HS          +     D N  +T+VP RN +FL  AA++
Sbjct: 58  HLYLDLAKIFTYSNCSLLQHSDNEIPHESYNEQLNKTDGNPVSTYVPFRNGLFLSSAASI 117

Query: 123 AYRLGITNIVIGVCETD--YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           A   G   I  G    D   S YPDC      A+  AI  G    + +  P + + K + 
Sbjct: 118 ALSKGCNIIYYGAHSDDAAGSAYPDCSKVFNNAMNQAIYEGSGHQLEIKAPFVEMTKADI 177

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            K+   +G      +  + + +CY G           C +C  C  RQ  +++   K
Sbjct: 178 VKIGLSLG------VPYQLTWSCYEGNDTP-------CGTCGTCIDRQNAFLKNGIK 221


>gi|304437053|ref|ZP_07397016.1| transcription regulator ExsB [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304370004|gb|EFM23666.1| transcription regulator ExsB [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 228

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 64/236 (27%), Positives = 100/236 (42%), Gaps = 27/236 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS TC++ A      +  +SF+Y QR+  EL+    +          
Sbjct: 1   MGERAVILLSGGLDSCTCMAIAHAAGQELYPISFNYHQRHSRELDAAKSIAAHYHAAEHL 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL-PNTFVPGRNIIFLVFAATLAYR 125
             ++        +  +G  + +    +V     +    P T+VP RN+IFL +A   A R
Sbjct: 61  IIET-------NMDAIGGSALTDSAIDVPQGDAERTDIPVTYVPARNLIFLSYAVGYAER 113

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME------SHVTVHTPLMWLKKYE 179
           +G  ++ IGV   DYSGYPDCR   I A + A +            + + TPL  L K E
Sbjct: 114 VGAAHVYIGVNSVDYSGYPDCRPAFIAAFQRAADAATAASAENGRRIVIETPLQHLSKGE 173

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
             +        D ++     + +CY G           C  C +C LR +G+ E  
Sbjct: 174 IIRRG------DALDAPYALTTSCYQGG-------SVACGVCDSCLLRLRGFAEAG 216


>gi|238023182|ref|ZP_04603608.1| hypothetical protein GCWU000324_03108 [Kingella oralis ATCC 51147]
 gi|237865565|gb|EEP66705.1| hypothetical protein GCWU000324_03108 [Kingella oralis ATCC 51147]
          Length = 217

 Score =  149 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 94/232 (40%), Positives = 134/232 (57%), Gaps = 22/232 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
             +AL++FSGGQDS+TCL  A+       V+T+SF YGQR+ VEL+    + + +     
Sbjct: 3   PNTALVIFSGGQDSTTCLFQAIADCGAGNVQTISFQYGQRHAVELQRAAWIAQDLG---- 58

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                     +L L+ +G+I+H++L  + A   Q  N PNTFV GRN +FL++AA  A  
Sbjct: 59  ------VPHTVLDLSAIGNITHNALMDSSAPIQQAGNTPNTFVDGRNALFLLYAAIHAKA 112

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            GI  I  GVCETD+SGYPDCR   I+++   +NL M+    + TPLMWL K +TW LA 
Sbjct: 113 QGIHRIYTGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYPFDIRTPLMWLTKKQTWALAD 172

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            +G     + I   +HTCY+G          GC+ CPAC LR++G  E+  +
Sbjct: 173 QLGAF---DYIRAHTHTCYMGVAG-------GCHQCPACILRERGLREYLAE 214


>gi|317178997|dbj|BAJ56785.1| ExsB trans-regulatory protein [Helicobacter pylori F30]
          Length = 226

 Score =  149 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 88/224 (39%), Positives = 138/224 (61%), Gaps = 8/224 (3%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            ++ FSGGQDS+T   WA  RF +V  + FDY Q++ VELEC   +   +     +    
Sbjct: 6   CVISFSGGQDSTTLAVWAKKRFKKVYLVGFDYAQKHSVELECAQKIASLL-----QLPYE 60

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           + +   L       +  +S         Q+ +LPN+FVP RN IF+    + A ++G +N
Sbjct: 61  IIQLDFLENITYSALFKNSNDLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKIGASN 120

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           I +GV + D+SGYPDC+ D I++IE A+NLG  + + + TPLM+L K + +++A+D+G  
Sbjct: 121 IALGVSQADFSGYPDCKKDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKDLGA- 179

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
             ++LI++E+HTCY G+R   + +GYGC+ CPAC LR+KG+ EF
Sbjct: 180 --LDLIIKETHTCYQGERKILHAYGYGCDECPACQLRKKGYEEF 221


>gi|114776302|ref|ZP_01451347.1| exsB protein [Mariprofundus ferrooxydans PV-1]
 gi|114553132|gb|EAU55530.1| exsB protein [Mariprofundus ferrooxydans PV-1]
          Length = 230

 Score =  149 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 72/233 (30%), Positives = 112/233 (48%), Gaps = 24/233 (10%)

Query: 11  ALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A++L SGG DSST L+WA      +  T++FDYGQR+++EL+    +         +   
Sbjct: 8   AVVLLSGGLDSSTALAWAVRKMGWQCHTVAFDYGQRHRIELDASAAIAHSFGVTDHRV-- 65

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                  + L  +G  + +S T     +     +P+T+VP RN+IFL  AA LA  +  T
Sbjct: 66  -----ISVDLRAIGHSALTSATPVPKDEAGHAGIPSTYVPARNLIFLSLAAGLAEAVCAT 120

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKKYETWKLA 184
            +VIG    DYSGYPDCR + + A      LG ++      + +  PL+ L K E  +L 
Sbjct: 121 RLVIGANVVDYSGYPDCRQEFLDAFVRTALLGTKAGSEGGDLQIAAPLIQLGKAEIIELG 180

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            D+G      L    + +CY          G  C  C +CY R++G+ +   +
Sbjct: 181 LDLG------LDYGLTRSCYDP-----LPGGSPCGHCDSCYYRRQGFEQLGRQ 222


>gi|24374047|ref|NP_718090.1| queuosine biosynthesis protein QueC [Shewanella oneidensis MR-1]
 gi|81461394|sp|Q8EE85|QUEC_SHEON RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|24348521|gb|AAN55534.1|AE015692_4 exsB protein [Shewanella oneidensis MR-1]
          Length = 238

 Score =  149 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 92/224 (41%), Positives = 143/224 (63%), Gaps = 21/224 (9%)

Query: 17  GGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHI 76
           GGQDS+TCL  AL ++D V  ++FDYGQR++ E++    + +++         ++    +
Sbjct: 14  GGQDSTTCLIQALTQYDEVHGITFDYGQRHREEIDVAKSLAQRL---------NITSHKV 64

Query: 77  LPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
           + +++L +++ S+LT++   V+ ++ +N LPNTFVPGRNI+FL  A   AY+LG   I+ 
Sbjct: 65  MDVSLLNELAISALTRDAIPVSHELMENGLPNTFVPGRNILFLTLAGIYAYQLGAEAIIT 124

Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
           GVCETD+SGYPDCRHD +RA+E+A+  GM+  + + TPLMWL K +TW LA        +
Sbjct: 125 GVCETDFSGYPDCRHDFVRAMESALVQGMDKKLNIITPLMWLNKAQTWALADK---YQQL 181

Query: 194 NLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +L+   + TCY G        G GC  CPAC+LRQ+G  ++ + 
Sbjct: 182 DLVRHHTLTCYNGIV------GDGCGDCPACHLRQRGLDDYLQN 219


>gi|157414297|ref|YP_001485163.1| PP-loop superfamily ATPase [Prochlorococcus marinus str. MIT 9215]
 gi|167016444|sp|A8G7J6|QUEC_PROM2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|157388872|gb|ABV51577.1| Predicted PP-loop superfamily ATPase [Prochlorococcus marinus str.
           MIT 9215]
          Length = 224

 Score =  149 bits (375), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 77/237 (32%), Positives = 113/237 (47%), Gaps = 26/237 (10%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  K  S ++L SGG DSST    A     ++  LSFDYGQR+K EL     + K     
Sbjct: 1   MTLKNKSIVVLLSGGLDSSTVTGIAKKSEAKIFGLSFDYGQRHKKELYSASIIAKHFNIE 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATL 122
             K          L L++ G  S +   KN+    +Q N +PNT+VPGRN IF+  A + 
Sbjct: 61  EFKI-------IKLDLSLWGGSSLTDTQKNIPLEGVQTNKIPNTYVPGRNTIFISVALSY 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTPLMWLKK 177
           A  +    I +GV   DYSGYPDCR D I+  +   +L        + + + TPL+ L K
Sbjct: 114 AEAIDADFIGLGVNALDYSGYPDCRPDYIKKFQELADLANKRGRENNPIKLWTPLLDLNK 173

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            E  KLA         ++ LE++ +CY G       +   C  C +C +R   + ++
Sbjct: 174 EEIIKLAY------SNHVPLEKTWSCYSG-------YSKPCGKCDSCRIRNDAYEKW 217


>gi|194097759|ref|YP_002000800.1| YbaX [Neisseria gonorrhoeae NCCP11945]
 gi|239998262|ref|ZP_04718186.1| YbaX [Neisseria gonorrhoeae 35/02]
 gi|240122816|ref|ZP_04735772.1| YbaX [Neisseria gonorrhoeae PID332]
 gi|268594117|ref|ZP_06128284.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae 35/02]
 gi|268681430|ref|ZP_06148292.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae PID332]
 gi|293397674|ref|ZP_06641880.1| exsB protein [Neisseria gonorrhoeae F62]
 gi|254764362|sp|B4RQ61|QUEC_NEIG2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|193933049|gb|ACF28873.1| YbaX [Neisseria gonorrhoeae NCCP11945]
 gi|268547506|gb|EEZ42924.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae 35/02]
 gi|268621714|gb|EEZ54114.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae PID332]
 gi|291611620|gb|EFF40689.1| exsB protein [Neisseria gonorrhoeae F62]
 gi|317163544|gb|ADV07085.1| YbaX [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 219

 Score =  149 bits (375), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 91/229 (39%), Positives = 139/229 (60%), Gaps = 23/229 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
              AL++FSGGQDS+TCL  A+  +  + V+ ++F YGQR+ VELE    + + +     
Sbjct: 3   NQKALVIFSGGQDSTTCLIQAIQTYGRENVQAITFRYGQRHAVELERAEWIAQDLG---- 58

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     +L L+++  I+H++L     A++  DN +PNTFV GRN +FL++AA  A 
Sbjct: 59  ------VSQTVLDLSLMRQITHNALMDETAAIETADNGVPNTFVDGRNALFLLYAAIFAK 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             GI +I+ GVCETD+SGYPDCR   ++++   +NL M+    +HTPLM+L K +TW LA
Sbjct: 113 GQGIRHIIAGVCETDFSGYPDCRGVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
            ++G   +++ I E++HTCY G          GC  CP+C LR++G  E
Sbjct: 173 DEMG---VLDYIREQTHTCYKGIVG-------GCRECPSCILRERGLAE 211


>gi|59800588|ref|YP_207300.1| YbaX [Neisseria gonorrhoeae FA 1090]
 gi|75356427|sp|Q5FA99|QUEC_NEIG1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|59717483|gb|AAW88888.1| putative aluminum resistance protein [Neisseria gonorrhoeae FA
           1090]
          Length = 224

 Score =  149 bits (375), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 88/228 (38%), Positives = 133/228 (58%), Gaps = 16/228 (7%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
              AL++FSGGQDS+TCL  A+  +  + V+ ++F YGQR+ VELE    + + +     
Sbjct: 3   NQKALVIFSGGQDSTTCLIQAIQTYGRENVQAITFRYGQRHAVELERAEWIAQDLGVSQT 62

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
               SL             +  ++  +  A++  DN +PNTFV GRN +FL++AA  A  
Sbjct: 63  VLDLSLMRQITHN----ALMDETAAIETAAIETADNGVPNTFVDGRNALFLLYAAIFAKG 118

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            GI +I+ GVCETD+SGYPDCR   ++++   +NL M+    +HTPLM+L K +TW LA 
Sbjct: 119 QGIRHIIAGVCETDFSGYPDCRGVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALAD 178

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
           ++G   +++ I E++HTCY G          GC  CP+C LR++G  E
Sbjct: 179 EMG---VLDYIREQTHTCYKGIVG-------GCRECPSCILRERGLAE 216


>gi|289191719|ref|YP_003457660.1| exsB protein [Methanocaldococcus sp. FS406-22]
 gi|288938169|gb|ADC68924.1| exsB protein [Methanocaldococcus sp. FS406-22]
          Length = 232

 Score =  149 bits (375), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 56/244 (22%), Positives = 95/244 (38%), Gaps = 30/244 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMPKWK 68
            A+ + SGG DS+     A D    V  ++F+YGQR    E+     + + +        
Sbjct: 2   KAITVLSGGLDSTVATLIAKDLGYEVTAITFNYGQRAAKREINSAKKICEILG------- 54

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMK----------IQDNNLPNTFVPGRNIIFLVF 118
               E  ++ L  +     SSL     +                +   +VP RN+I    
Sbjct: 55  ---IEHIVVDLPFVKQFGKSSLVTEKEIPTLKMEELDSEKAFETMKAVWVPARNVIMFGI 111

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
           A+  A  L    I IG+ + +   +PD   + + A    +  G  + V +  PL    K 
Sbjct: 112 ASGFAEALDAEKIFIGINKEEGVTFPDNTIEFVEAFNKVLEYGTLNKVKIEAPLYDKTKE 171

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM----EF 234
           E  KL  ++  +  V + L+ S++CY        E    C  C +C  R++ ++    E 
Sbjct: 172 EIVKLGAELEKKLGVEV-LKYSYSCYR----DNGEDFLHCGKCESCMRRKRAFLMAGVED 226

Query: 235 KEKY 238
           K KY
Sbjct: 227 KTKY 230


>gi|325267556|ref|ZP_08134208.1| transcription regulator ExsB [Kingella denitrificans ATCC 33394]
 gi|324980906|gb|EGC16566.1| transcription regulator ExsB [Kingella denitrificans ATCC 33394]
          Length = 217

 Score =  148 bits (374), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 90/230 (39%), Positives = 140/230 (60%), Gaps = 23/230 (10%)

Query: 11  ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           AL++FSGGQDS+TCL  A+ ++  + V+ ++F YGQR+ +ELE    + +++        
Sbjct: 4   ALVVFSGGQDSTTCLFQAMQQYGAENVQAITFAYGQRHGIELERAASIAQELG------- 56

Query: 69  DSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                  +L L+++  I+H++LT    A++     +PNTFV GRN +FL++AA  A    
Sbjct: 57  ---IRQTVLDLSLITAITHNALTDAQAAIETDAQGMPNTFVDGRNALFLLYAAIYAKSQN 113

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I +I IGVCETD+SGYPDCR   ++++   +NL M     +HTPLM+L K ETW LA ++
Sbjct: 114 IRDIFIGVCETDFSGYPDCRQIFVQSMNVTLNLAMAYDFRLHTPLMYLTKKETWALADEL 173

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           G   +++ I   +HTCYLG          GC+ CP+C LR++G  E+  +
Sbjct: 174 G---VLDYIRTRTHTCYLGVDG-------GCHECPSCVLRERGLAEYLAE 213


>gi|298370142|ref|ZP_06981458.1| ExsB protein [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281602|gb|EFI23091.1| ExsB protein [Neisseria sp. oral taxon 014 str. F0314]
          Length = 219

 Score =  148 bits (374), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 91/233 (39%), Positives = 143/233 (61%), Gaps = 23/233 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +   AL++FSGGQDS+TCL  A+  +  + V+ ++F YGQR+ VELE    + + +    
Sbjct: 2   QNRQALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELERARWIAQDLG--- 58

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                   +  +L L+++  I+H++L  +  A++   + LPNTFV GRN +FL++AA  A
Sbjct: 59  -------VKQTVLDLSLMQQITHNALMDDTAAIETASDGLPNTFVDGRNALFLLYAAIYA 111

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              GI +I+ GVCETD+SGYPDCR   ++++   +NL M+    +HTPLM+L K +TW L
Sbjct: 112 KGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYAFQIHTPLMYLTKAQTWAL 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           A ++G    ++ I E++HTCY G          GC+ CP+C LR++G  E+ E
Sbjct: 172 ADEMGA---LDYIREQTHTCYNGIVG-------GCHECPSCVLRERGLAEYLE 214


>gi|288559694|ref|YP_003423180.1| queuosine biosynthesis protein QueC [Methanobrevibacter ruminantium
           M1]
 gi|288542404|gb|ADC46288.1| queuosine biosynthesis protein QueC [Methanobrevibacter ruminantium
           M1]
          Length = 211

 Score =  148 bits (374), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 24/231 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +   +L+ SGG DS+T L   L+  + V  LSF+YGQ+  +E+E    + K        
Sbjct: 1   MSKDVVLILSGGLDSTTLLYKLLNEGNNVTALSFNYGQKAAIEIERASEICK-------- 52

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +     +  +  + D+  SSLT      +Q+    +T VP RN I L  A   A   
Sbjct: 53  --MNDVNHFVFDIRNIVDLLSSSLTDKDNDNVQE--PKSTVVPSRNTILLELATAFAISN 108

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +  +  G  + D   YPD   + ++ I     +    ++ V  P +   K +  KLA +
Sbjct: 109 NLEEVYYGAIKADTGDYPDTTPEFLKQINELNKVNNYEYIPVCAPFIDTDKKDVVKLALE 168

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +G      + +E++ +CY          G  C  C +C  R +   E KE+
Sbjct: 169 LG------VPIEKTWSCY------VNNDGTPCGECFSCKSRIEAIKEAKEE 207


>gi|325129660|gb|EGC52475.1| exsB protein [Neisseria meningitidis OX99.30304]
 gi|325135885|gb|EGC58497.1| exsB protein [Neisseria meningitidis M0579]
 gi|325202686|gb|ADY98140.1| exsB protein [Neisseria meningitidis M01-240149]
 gi|325207568|gb|ADZ03020.1| exsB protein [Neisseria meningitidis NZ-05/33]
          Length = 219

 Score =  148 bits (374), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 91/232 (39%), Positives = 141/232 (60%), Gaps = 23/232 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
              AL++FSGGQDS+TCL  A+  +  + V+ ++F YGQR+ VELE    + + +     
Sbjct: 3   NQQALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELERARWIAQDLG---- 58

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +  +L L+++  I+H++L  +  A++   N +PNTFV GRN +FL++AA  A 
Sbjct: 59  ------IKQTVLDLSLMRQITHNALMDDTAAIETAGNGVPNTFVDGRNALFLLYAAIYAK 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             GI +I+ GVCETD+SGYPDCR   ++++   +NL M+    +HTPLM+L K +TW LA
Sbjct: 113 GQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            ++G    ++ I E++HTCY G          GC  CP+C LR++G  E+ E
Sbjct: 173 DEMGA---LDYIREQTHTCYNGIVG-------GCRECPSCILRERGLAEYLE 214


>gi|292655863|ref|YP_003535760.1| exsB protein [Haloferax volcanii DS2]
 gi|291372353|gb|ADE04580.1| exsB protein [Haloferax volcanii DS2]
          Length = 244

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 55/243 (22%), Positives = 99/243 (40%), Gaps = 29/243 (11%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKI 60
            +       A++L SGG DS+T    A  R   +  L   YGQ+ +  E +C   +  ++
Sbjct: 3   TEPTSDDKRAVVLLSGGMDSATTAYEATRRGYELYALHTSYGQKTESKEYDCARELADEL 62

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFL 116
                       +   +  + L  I  SSLT +        +  +++P ++VP RN   L
Sbjct: 63  DAR---------DFLHIETSHLKQIGASSLTDDSMAVADADVDADDIPTSYVPFRNANLL 113

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV--HTPLMW 174
             A + A       + +G    DYSGYPDCR +   A E  +++G +   T+    P + 
Sbjct: 114 SMAVSYAEANDCDAVFVGAHSEDYSGYPDCRPEFFDAFEAMVDVGTKPDTTISLEVPFVH 173

Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
             K +  +   ++G      +  E + +CY  +          C +C +C  R + +   
Sbjct: 174 DSKTDIARRGLELG------VPFEHTWSCYRAEEP-------ACGTCDSCAFRLQAFQNL 220

Query: 235 KEK 237
            E+
Sbjct: 221 GER 223


>gi|261838120|gb|ACX97886.1| ExsB trans-regulatory protein [Helicobacter pylori 51]
          Length = 226

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 88/224 (39%), Positives = 138/224 (61%), Gaps = 8/224 (3%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            ++ FSGGQDS+T   WA  RF +V  + FDY Q++ VELEC   +   +     +    
Sbjct: 6   CIISFSGGQDSTTLAVWAKKRFKKVYLVGFDYAQKHSVELECAQKIASLL-----QLPYE 60

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           +     L       +  SS         Q+ +LPN+FVP RN IF+    + A ++G +N
Sbjct: 61  IIPLDFLENITHSALFKSSNDLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKIGASN 120

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           I +GV + D+SGYPDC+ D I++IE A+NLG  + + + TPLM+L K + +++A+D+G  
Sbjct: 121 IALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKDLG-- 178

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            +++L+++E+HTCY G+R   + +GYGC+ CPAC LR+KG+ EF
Sbjct: 179 -ILDLVIKETHTCYQGERKILHAYGYGCDECPACQLRKKGYEEF 221


>gi|269836354|ref|YP_003318582.1| exsB protein [Sphaerobacter thermophilus DSM 20745]
 gi|269785617|gb|ACZ37760.1| exsB protein [Sphaerobacter thermophilus DSM 20745]
          Length = 230

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 71/233 (30%), Positives = 107/233 (45%), Gaps = 27/233 (11%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M     + P A++L SGG DS+T    A      +  LSFDYGQR++ EL+    V + +
Sbjct: 1   MQAQANERPGAVVLLSGGVDSTTVAYLARASGYAIYALSFDYGQRHRRELDAAAAVARAV 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  +          + LA +G  S +   + +      + +P+T+VP RN IFL  A+
Sbjct: 61  EAVEHRVV-------RIDLAGIGGSSLTGHGE-IPTGGVTDGIPSTWVPARNHIFLAVAS 112

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMW 174
             A  +G   I IGV + DYSGYPDCR + + A + A +L  +  V       V  PL+ 
Sbjct: 113 GYAEVVGARAIYIGVSQVDYSGYPDCRAEFLEAYQRAADLASKQFVEEGRSIPVVAPLLH 172

Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLR 227
           L K  T +L   +G      +    + +CY G           C  C +C LR
Sbjct: 173 LSKAGTVRLGLALG------VDYGLTWSCYQGGESP-------CGVCDSCRLR 212


>gi|123969433|ref|YP_001010291.1| ATPase [Prochlorococcus marinus str. AS9601]
 gi|167016446|sp|A2BTS3|QUEC_PROMS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|123199543|gb|ABM71184.1| hypothetical ATPase [Prochlorococcus marinus str. AS9601]
          Length = 224

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 76/237 (32%), Positives = 115/237 (48%), Gaps = 26/237 (10%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  K  S ++L SGG DSST    A     ++  LSFDYGQR+K EL     + K     
Sbjct: 1   MTLKNKSIVVLLSGGLDSSTVTGIAKKSEAKIFGLSFDYGQRHKKELNSASIIAKHF--- 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATL 122
                    +   L L++ G  S +   KN+ ++ +Q N +PNT+VPGRN IF+  A + 
Sbjct: 58  ----DIDEFKIIKLDLSLWGGSSLTDTQKNIPIEGVQTNKIPNTYVPGRNTIFISVALSY 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTPLMWLKK 177
           A  +    I +GV   DYSGYPDCR D I+  +   +L        + + + TPL+ L K
Sbjct: 114 AEAIDADFIGLGVNALDYSGYPDCRPDYIKKFQELADLANKRGRENNPIKLWTPLLDLNK 173

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            E  KLA D       ++ L+++ +CY G           C  C +C +R   + ++
Sbjct: 174 EEIIKLAFD------NHVPLDKTWSCYSGNSKP-------CGKCDSCRIRNAAYEKW 217


>gi|124026870|ref|YP_001015985.1| ATPase [Prochlorococcus marinus str. NATL1A]
 gi|167016443|sp|A2C5G1|QUEC_PROM1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|123961938|gb|ABM76721.1| hypothetical ATPase [Prochlorococcus marinus str. NATL1A]
          Length = 225

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 67/229 (29%), Positives = 106/229 (46%), Gaps = 16/229 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           + + L SGG DS+T    A++   +V  LSFDYGQR+  EL+    + K +         
Sbjct: 5   TTIALLSGGIDSATAACIAMEAGQKVIGLSFDYGQRHLKELQAAADLAKNLNLEDHI--- 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                  + L+  G  S +  ++ +  K IQ N +PNT+VPGRN IF+    +LA   G 
Sbjct: 62  ----TIKIDLSSWGGSSLTDTSQAIPTKGIQKNTIPNTYVPGRNTIFVAIGLSLAEARGA 117

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I +G+   DYSGYPDCR D ++A +   NL            +W    + W+  +   
Sbjct: 118 NRIALGINAMDYSGYPDCRPDYLKAYQELANLSSRVGREGKGIKLWAPLLD-WEKTKIFE 176

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
               + + +E++ +CY G+          C  C +C +R K   E   +
Sbjct: 177 EALRLKIPIEKTWSCYQGESKP-------CGRCDSCRIRDKALKEIGRE 218


>gi|317010860|gb|ADU84607.1| hypothetical protein HPSA_03020 [Helicobacter pylori SouthAfrica7]
          Length = 225

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 89/226 (39%), Positives = 139/226 (61%), Gaps = 8/226 (3%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            ++ FSGGQDS+T   WA  RF +V  + FDY Q++ VELEC   +   +     +    
Sbjct: 6   CVISFSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECAQKIASLL-----QLPYE 60

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           +     L       +  +S         Q+ +LPN+FVP RN IF+    + A +LG +N
Sbjct: 61  IIPLDFLENITHSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKLGASN 120

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           I +GV + D+SGYPDC+ D I++IE A+NLG  + + + TPLM+L K + +++A+D+G  
Sbjct: 121 IALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKIVTPLMFLSKAQEFQMAKDLG-- 178

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            +++LI++E+HTCY G+R   + +GYGC+ CPAC LR+KG+ EF+ 
Sbjct: 179 -VLDLIIKETHTCYQGERKILHAYGYGCDKCPACQLRKKGYEEFQA 223


>gi|296315121|ref|ZP_06865062.1| ExsB protein [Neisseria polysaccharea ATCC 43768]
 gi|296838036|gb|EFH21974.1| ExsB protein [Neisseria polysaccharea ATCC 43768]
          Length = 219

 Score =  148 bits (374), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 90/232 (38%), Positives = 143/232 (61%), Gaps = 23/232 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
              AL++FSGGQDS+TCL  A+  +  + V+ ++F YGQR+ VELE    + + +     
Sbjct: 3   NQQALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHDVELERARWIAQDLG---- 58

Query: 66  KWKDSLGEDHILPLAILGDISHSS-LTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +  +L L+++  I+H++ + +  A++  +N +PNTFV GRN +FL++AA  A 
Sbjct: 59  ------VKQTVLDLSLMRQITHNALMDEAAAIETAENGVPNTFVDGRNALFLLYAAIYAK 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             GI +I+ GVCETD+SGYPDCR   ++++   +NL M+    +HTPLM+L K +TW LA
Sbjct: 113 GQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            ++G    ++ I E++HTCY G          GC+ CP+C LR++G  E+ E
Sbjct: 173 DEMGA---LDYIREQTHTCYNGIVG-------GCHECPSCVLRERGLAEYLE 214


>gi|254493040|ref|ZP_05106211.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae 1291]
 gi|226512080|gb|EEH61425.1| queuosine biosynthesis protein queC [Neisseria gonorrhoeae 1291]
          Length = 219

 Score =  148 bits (373), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 90/229 (39%), Positives = 138/229 (60%), Gaps = 23/229 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
              AL++FSGGQDS+TCL  A+  +  + V+ ++F YGQR+ VELE    + + +     
Sbjct: 3   NQKALVIFSGGQDSTTCLIQAIQTYGRENVQAITFRYGQRHAVELERAEWIAQDLG---- 58

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     +L L+++  I+H++L     A++  DN +PNTFV GRN +FL++AA  A 
Sbjct: 59  ------VSQTVLDLSLMRQITHNALMDETAAIETADNGVPNTFVDGRNALFLLYAAIFAK 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             GI +I+ GVCETD+SGYPDCR   ++++   +NL M+    + TPLM+L K +TW LA
Sbjct: 113 GQGIRHIIAGVCETDFSGYPDCRGVFVKSMNVTLNLAMDYDFQIQTPLMYLTKAQTWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
            ++G   +++ I E++HTCY G          GC  CP+C LR++G  E
Sbjct: 173 DEMG---VLDYIREQTHTCYKGIVG-------GCRECPSCILRERGLAE 211


>gi|196230867|ref|ZP_03129728.1| exsB protein [Chthoniobacter flavus Ellin428]
 gi|196225208|gb|EDY19717.1| exsB protein [Chthoniobacter flavus Ellin428]
          Length = 232

 Score =  148 bits (373), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 97/237 (40%), Gaps = 29/237 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVEL 63
           + ++   ++L SGG DS   L         V  LSFDYG ++   E+       +++   
Sbjct: 1   MSRS-KVVVLVSGGMDSVAALYHTQAEHPVVGALSFDYGSKHNHKEIPLAAYHCERLG-- 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFA 119
                       ++PL+ + ++  S L ++         ++  +  T VP RN I L  A
Sbjct: 58  --------VPHRVIPLSFINELFASDLLQSGGAIPDGHYEELTMKQTVVPFRNGIMLSIA 109

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
              A  +G   ++I     D++ YPDCR   ++A+  AI LG  + + +  P +   K +
Sbjct: 110 GGYAESVGAQGLIIAAHAGDHAIYPDCREAFMQAMGEAIRLGTYAEIQLLRPFIHFSKAQ 169

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
                 ++G      +   ++ +CY G+          C +C  C  R++ +     
Sbjct: 170 IAARGHELG------VDFAKTWSCYKGQE-------IHCGTCGTCVERREAFAVAGI 213


>gi|312136612|ref|YP_004003949.1| exsb protein [Methanothermus fervidus DSM 2088]
 gi|311224331|gb|ADP77187.1| exsB protein [Methanothermus fervidus DSM 2088]
          Length = 231

 Score =  148 bits (373), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 41/252 (16%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQR-NKVELECRLCVRKKIV 61
           + KAP A+ + SGG DS   L   + +     V  ++FDYGQ+  ++E+     + K + 
Sbjct: 1   MVKAPRAISILSGGLDSVVALFDFIKKNPNGEVHAITFDYGQKSAEMEINASKKICKYLG 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKI-----------QDNNLPNTFVPG 110
                      +  +L +  LG +  S+LT +  +              +      +VP 
Sbjct: 61  ----------IKHSVLNVKWLGKLGTSALTTDKEIPKLKISDLEDKEKCEKTAKMVWVPA 110

Query: 111 RNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT 170
           RNI+F   A+  A       I++G    + S +PD   + + A    + +G  S++ +  
Sbjct: 111 RNIVFTAIASAFAEAENAEKIIVGWDREEASTFPDNSKEFLSAFNNLLAIGTMSNINIEA 170

Query: 171 PLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
           PL+ + K+E  KL +  G      +  E +++CY G           C  C +C  R++ 
Sbjct: 171 PLIDMDKHEIVKLGKKYG------VPFEFTYSCYQGFEK-------HCGVCESCVRRKRA 217

Query: 231 WM----EFKEKY 238
           +     E   +Y
Sbjct: 218 FKLAKVEDPTEY 229


>gi|308061969|gb|ADO03857.1| ExsB trans-regulatory protein [Helicobacter pylori Cuz20]
 gi|308063570|gb|ADO05457.1| ExsB trans-regulatory protein [Helicobacter pylori Sat464]
          Length = 226

 Score =  148 bits (373), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 87/227 (38%), Positives = 138/227 (60%), Gaps = 8/227 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           + FSGGQDS+T   WA  RF +V  + FDY Q++ VELEC   +   +     +    + 
Sbjct: 8   ISFSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECAQKIASLL-----QLPYEII 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
               L       +  +S         Q+ +LPN+FVP RN IF+    + A ++G +NI 
Sbjct: 63  PLDFLENITHSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKIGASNIA 122

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
           +GV + D+SGYPDC+ D I++IE A+NLG  + + + TPLM+L K + +++A+D+G   +
Sbjct: 123 LGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKDLG---V 179

Query: 193 VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           ++L+++E+HTCY G+R   + +GYGC  CPAC LR+KG+ EF+   +
Sbjct: 180 LDLVIKETHTCYQGERKILHAYGYGCGECPACQLRKKGYEEFESNKK 226


>gi|261378241|ref|ZP_05982814.1| ExsB protein [Neisseria cinerea ATCC 14685]
 gi|269145319|gb|EEZ71737.1| ExsB protein [Neisseria cinerea ATCC 14685]
          Length = 219

 Score =  148 bits (373), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 92/232 (39%), Positives = 144/232 (62%), Gaps = 23/232 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMP 65
              AL++FSGGQDS+TCL  A+  + R  V+ ++F YGQR+ VELE    + + +     
Sbjct: 3   NQQALVIFSGGQDSTTCLIQAIQTYRRENVQAITFQYGQRHVVELERARWIAQDLG---- 58

Query: 66  KWKDSLGEDHILPLAILGDISHSS-LTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +  +L L+++  I+H++ + +  A++  DN +PNTFV GRN +FL++AA  A 
Sbjct: 59  ------VKQTVLDLSLMRQITHNALMDEAAAIETADNGVPNTFVDGRNALFLLYAAIYAK 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             GI +I+ GVCETD+SGYPDCR   ++++   +NL M+    +HTPLM+L K +TW LA
Sbjct: 113 GQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            ++G   +++ I E++HTCY G          GC+ CP+C LR++G  E+ E
Sbjct: 173 DEMG---VLDYIREQTHTCYNGIVG-------GCHECPSCVLRERGLAEYLE 214


>gi|332296388|ref|YP_004438311.1| exsB protein [Thermodesulfobium narugense DSM 14796]
 gi|332179491|gb|AEE15180.1| exsB protein [Thermodesulfobium narugense DSM 14796]
          Length = 216

 Score =  148 bits (373), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 67/219 (30%), Positives = 104/219 (47%), Gaps = 19/219 (8%)

Query: 14  LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
           +FSGG DS+T L + L++  +V+T+SF YGQ++K ELEC   + +K+         S  +
Sbjct: 6   IFSGGLDSTTLLYYLLNQGHKVKTISFFYGQKHKKELECSKNIARKLNIENKLIDLSALK 65

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
           D      I G  S +S          D N+ +T VP RN+IFL  A + A       + I
Sbjct: 66  D------IFGKSSLTSDMDIPEGHYNDTNMKSTVVPNRNMIFLSIAISYAISSNFDAVSI 119

Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
           GV   D++ YPDCR   I  ++    +   S + +  P + LKKYE  K+  ++      
Sbjct: 120 GVHAGDHAIYPDCRPVFINKMKDVAKVSDYSEIGILAPFLDLKKYEIVKIGLEL------ 173

Query: 194 NLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
            +  E + TCY G+          C  C +C  R + + 
Sbjct: 174 KVPYEMTWTCYKGEEKP-------CLKCGSCTERLEAFE 205


>gi|330506762|ref|YP_004383190.1| ExsB protein [Methanosaeta concilii GP-6]
 gi|328927570|gb|AEB67372.1| ExsB protein [Methanosaeta concilii GP-6]
          Length = 220

 Score =  148 bits (373), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 28/228 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+L+ SGG DS+T L   L     V+ L+F+YGQ++K E++C + +  ++         
Sbjct: 2   KAVLILSGGLDSTTLLYKLLADGYLVDALTFNYGQKHKKEIDCAIAITSRLD-------- 53

Query: 70  SLGEDHILPLA----ILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 I+ L+     LG+ +     +  +    +     T VP RN+I L  AA  A  
Sbjct: 54  --VPHQIIDLSTLAAFLGESALLGKKEVPSCHYTEEAARQTVVPNRNMIMLSVAAGYAEA 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-ESHVTVHTPLMWLKKYETWKLA 184
             IT +     + D + YPDCR + + A++ AI LG   + V +  P + + K +  ++ 
Sbjct: 112 HEITELFYAAHKNDQTIYPDCRPEFVEALKPAIRLGTAWNPVELQAPFVHMTKADIVRMG 171

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
             +       +  E + +CY G           C +CP C  R++ + 
Sbjct: 172 LKL------QVPYELTWSCYKG-------KAMPCRTCPTCIEREEAFA 206


>gi|217031987|ref|ZP_03437488.1| hypothetical protein HPB128_187g14 [Helicobacter pylori B128]
 gi|298736334|ref|YP_003728860.1| hypothetical protein HPB8_839 [Helicobacter pylori B8]
 gi|216946297|gb|EEC24903.1| hypothetical protein HPB128_187g14 [Helicobacter pylori B128]
 gi|298355524|emb|CBI66396.1| conserved hypothetical protein [Helicobacter pylori B8]
          Length = 228

 Score =  148 bits (373), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 89/227 (39%), Positives = 140/227 (61%), Gaps = 8/227 (3%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            ++ FSGGQDS+T   WA  RF +V  + FDY Q++ VELEC   +   +     +    
Sbjct: 6   CVIGFSGGQDSTTLAVWAKKRFKKVCLVGFDYVQKHSVELECAQKIASLL-----QLPYE 60

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           +     L       +  +S         Q+ +LPN+FVP RN IF+    + A +LG +N
Sbjct: 61  IISLDFLENITRSALFKNSNDLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKLGASN 120

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           I +GV + D+SGYPDC+ D I++IE A+NLG  + + + TPLM+L K + +++A+D+G  
Sbjct: 121 IALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKDLG-- 178

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            +++L+++E+HTCY G+R   + +GYGC+ CPAC LR+KG+ EF+ K
Sbjct: 179 -VLDLVIKETHTCYQGERKILHAYGYGCDECPACQLRKKGYEEFQTK 224


>gi|308184425|ref|YP_003928558.1| hypothetical protein HPSJM_03245 [Helicobacter pylori SJM180]
 gi|308060345|gb|ADO02241.1| hypothetical protein HPSJM_03245 [Helicobacter pylori SJM180]
          Length = 225

 Score =  148 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 87/226 (38%), Positives = 139/226 (61%), Gaps = 8/226 (3%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            ++ FSGGQDS+T   WA  RF +V  + FDY Q++ VELEC   +   +     +    
Sbjct: 6   CVIGFSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECAQKIASLL-----QLPYE 60

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           +     L       +  +S         Q+ +LPN+FVP RN IF+    + A ++G +N
Sbjct: 61  IIPLGFLENITHSALFKNSNDLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKIGASN 120

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           I +GV + D+SGYPDC+ D I++IE A+NLG  + + + TPLM+L K + +++A+D+G  
Sbjct: 121 IALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKDLG-- 178

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            +++L+++E+HTCY G+R   + +GYGC+ CPAC LR+KG+ EF+ 
Sbjct: 179 -VLDLVIKETHTCYQGERKILHAYGYGCDECPACQLRKKGFEEFQA 223


>gi|284164675|ref|YP_003402954.1| exsB protein [Haloterrigena turkmenica DSM 5511]
 gi|284014330|gb|ADB60281.1| exsB protein [Haloterrigena turkmenica DSM 5511]
          Length = 243

 Score =  148 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 56/235 (23%), Positives = 93/235 (39%), Gaps = 21/235 (8%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELM 64
                A++L SGG DS+T    A DR   +  L   YGQR +  ELEC   +  ++    
Sbjct: 13  STKKRAVILLSGGMDSATAAYEARDRGYELYALHTSYGQRTEDRELECARRLADELDA-- 70

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
               D L  +     AI                ++ + +P ++VP RN   L  A + A 
Sbjct: 71  ---ADFLQIETGHLSAIGASSLTDDEMAVADADMESDEIPTSYVPFRNANLLAMAVSYAE 127

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWK 182
                 + IG    D+SGYPDCR +   A E  +++G +    +++  P +   K +  +
Sbjct: 128 ANDCEAVFIGAHSEDFSGYPDCRPEFFEAFENVVDVGTKPETDISIEAPFVEWSKTDIAE 187

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
              D+       +  E + +CY             C +C AC  R + +     +
Sbjct: 188 RGVDL------EVPYEHTWSCYRENEP-------ACGTCDACAFRLQAFQNVGVR 229


>gi|72383131|ref|YP_292486.1| ExsB [Prochlorococcus marinus str. NATL2A]
 gi|110816242|sp|Q46I95|QUEC_PROMT RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|72002981|gb|AAZ58783.1| preQ(0) biosynthesis protein QueC [Prochlorococcus marinus str.
           NATL2A]
          Length = 225

 Score =  148 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 66/229 (28%), Positives = 107/229 (46%), Gaps = 16/229 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           + + L SGG DS+T    A++   +V  LSFDYGQR+  EL+    + K +         
Sbjct: 5   TTIALLSGGIDSATAACIAMEAGQKVIGLSFDYGQRHLKELQAAADLAKNLNLEDHI--- 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                  + L+  G  S +  ++ +  + IQ N +PNT+VPGRN IF+    +LA   G 
Sbjct: 62  ----TIKIDLSSWGGSSLTDTSQAIPTQGIQKNTIPNTYVPGRNTIFVAIGLSLAEARGA 117

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I +G+   DYSGYPDCR D ++A +   NL        +   +W    + W+  +   
Sbjct: 118 NRIALGINAMDYSGYPDCRPDYLKAYQELANLSSRVGREGNGIKLWAPLLD-WEKTKIFE 176

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
               + + +E++ +CY G+          C  C +C +R K   E   +
Sbjct: 177 EALRLKIPIEKTWSCYQGESKP-------CGKCDSCRIRDKALKEIGRE 218


>gi|317968278|ref|ZP_07969668.1| PP-loop superfamily ATPase [Synechococcus sp. CB0205]
          Length = 233

 Score =  148 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 16/229 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           P+A+ L SGG DS+T  + A     RV  LSFDYGQR++ EL+    V + +     +  
Sbjct: 14  PTAIALLSGGLDSATAAALAQAEGYRVIGLSFDYGQRHRRELQAAAAVAQTLGLAEHQSI 73

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                   + LA  G  + +    +V    +Q+  +P+T+VPGRN +F+    +LA   G
Sbjct: 74  H-------VNLAAWGGSALTDTAMDVPNEGVQEGVIPSTYVPGRNTVFIAIGLSLAEARG 126

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V+GV   DYSGYPDCR D + A +T  +L  ++    H   +W    E W   + +
Sbjct: 127 AERLVLGVNAVDYSGYPDCRPDYLGAFQTLADLASKAGREGHGTQLWAPLVE-WSKTKIV 185

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
                + + ++++ +CY G           C  C +C +R    +E   
Sbjct: 186 EEALRLGVPIDQTWSCYSGGEQP-------CGVCDSCRIRDAALIEAGR 227


>gi|91070513|gb|ABE11420.1| hypothetical ATPase [uncultured Prochlorococcus marinus clone
           HOT0M-3E5]
          Length = 224

 Score =  148 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 77/237 (32%), Positives = 115/237 (48%), Gaps = 26/237 (10%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  K  S ++L SGG DSST    A     ++  LSFDYGQR+K EL     + K     
Sbjct: 1   MALKNKSIVVLLSGGLDSSTVTGIAKKSEAKIFGLSFDYGQRHKKELNSASIIAKHFDIE 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATL 122
             K          L L++ G  S +   KN+ ++ +Q N +PNT+VPGRN IF+  A + 
Sbjct: 61  EFKI-------IKLDLSLWGGSSLTDTQKNIPIEGVQTNQIPNTYVPGRNTIFISVALSY 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTPLMWLKK 177
           A  +    I +GV   DYSGYPDCR D I+  +   +L        + + + TPL+ L K
Sbjct: 114 AEAIDADFIGLGVNALDYSGYPDCRPDYIKKFQELADLANKRGRENNPIKLWTPLLDLNK 173

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            E  KLA D       ++ L+++ +CY G           C  C +C +R   + ++
Sbjct: 174 EEIIKLAFD------NHVPLDKTWSCYSGNSKP-------CGKCDSCRIRNAAYEKW 217


>gi|315586680|gb|ADU41061.1| transcription regulator ExsB [Helicobacter pylori 35A]
          Length = 226

 Score =  148 bits (372), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 88/227 (38%), Positives = 138/227 (60%), Gaps = 8/227 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           + FSGGQDS+T   WA  RF +V  + FDY Q++ VELEC   +   +     +    + 
Sbjct: 8   ISFSGGQDSTTLAVWAKKRFKKVYLVGFDYAQKHSVELECAQKIASLL-----QLPYEII 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
               L       +  +S         Q+ +LPN+FVP RN IF+    + A ++G +NI 
Sbjct: 63  PLDFLENITHSALFKNSNDLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKIGASNIA 122

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
           +GV + D+SGYPDC+ D I++IE A+NLG  + + + TPLM+L K + +++A+D+G    
Sbjct: 123 LGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKDLGA--- 179

Query: 193 VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
           ++LI++E+HTCY G+R   + +GYGC+ CPAC LR+KG+ EF+   +
Sbjct: 180 LDLIIKETHTCYQGERKILHAYGYGCDKCPACQLRKKGYEEFESNQK 226


>gi|291550956|emb|CBL27218.1| preQ(0) biosynthesis protein QueC [Ruminococcus torques L2-14]
          Length = 227

 Score =  148 bits (372), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 58/234 (24%), Positives = 94/234 (40%), Gaps = 27/234 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            AL+LFSGG DS+T L  A+ ++  D+V  LS  YGQ++  E+   + V +         
Sbjct: 2   KALVLFSGGIDSTTALGLAIKKYGKDQVIALSISYGQKHDKEIRAAIAVAEYYGVEH--- 58

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQD------NNLPNTFVPGRNIIFLVFAAT 121
              L    I   +    +  S+         +       +   +T+VP RN +FL  AA+
Sbjct: 59  -LFLDLSKIFQYSNCSLLQQSTEEIPEESYAEQISKTNGDKPVSTYVPFRNGLFLSSAAS 117

Query: 122 LAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           +A       I  G    D +G  YPDC     +A+  AI  G    + +  P + + K E
Sbjct: 118 IALSKECGVIYYGAHADDSAGFAYPDCSPVFNQAMNEAIWEGSGHQLKIEAPFVNVSKAE 177

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
             ++  ++G      +  E + +CY G           C  C  C  R   +  
Sbjct: 178 VVRIGLELG------VPYELTWSCYEGGEKP-------CGKCGTCIDRAAAFQA 218


>gi|157826116|ref|YP_001493836.1| trans-regulatory protein ExsB [Rickettsia akari str. Hartford]
 gi|167016447|sp|A8GPK3|QUEC_RICAH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|157800074|gb|ABV75328.1| Trans-regulatory protein ExsB [Rickettsia akari str. Hartford]
          Length = 227

 Score =  148 bits (372), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 69/241 (28%), Positives = 109/241 (45%), Gaps = 29/241 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+T L+ A +    + ++SF+YGQRN  EL     + K+      K  
Sbjct: 2   KKAVMLVSGGADSATVLAMAREIGYEIHSMSFNYGQRNNAELRKVKELIKEYNVKQHKIV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQ----DNNLPNTFVPGRNIIFLVFAATLAY 124
           D       + L   G  + +    +V           ++P T+VP RN IFL +A   A 
Sbjct: 62  D-------IDLRAFGGSALTDDNIDVPHYHDVNAVPEDVPVTYVPSRNTIFLSYALGYAE 114

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG-----MESHVTVHTPLMWLKKYE 179
            +G  +I IGV  +D + YPDCR + I++ E   NL          +T+HTPL+ + K +
Sbjct: 115 VIGAKDIFIGVHTSDSANYPDCRPEYIKSFEKMANLATSIGIQGQKITIHTPLIDMTKEQ 174

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
             +    +G      +  + + +CY    D        C +C AC +R   +   K   Q
Sbjct: 175 IIRTGLKLG------VDYKNTISCYEPTEDDSS-----CGNCLACMIRLDAFK--KNNIQ 221

Query: 240 D 240
           D
Sbjct: 222 D 222


>gi|294668484|ref|ZP_06733581.1| ExsB protein [Neisseria elongata subsp. glycolytica ATCC 29315]
 gi|291309447|gb|EFE50690.1| ExsB protein [Neisseria elongata subsp. glycolytica ATCC 29315]
          Length = 219

 Score =  148 bits (372), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 92/233 (39%), Positives = 144/233 (61%), Gaps = 23/233 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +   AL++FSGGQDS+TCL  A+  +  + V+T++F YGQR+ VELE    + + +    
Sbjct: 2   QNQQALVIFSGGQDSTTCLIQAIQTYGRENVQTITFQYGQRHAVELEHARWIAQDLG--- 58

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                   +  +L L+++  I+H++L  +  A++   + LPNTFV GRN +FL++AA  A
Sbjct: 59  -------VKQIVLDLSLMQQITHNALMDDTAAIETASDGLPNTFVDGRNALFLLYAAIYA 111

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              GI +I+ GVCETD+SGYPDCR   ++++   +NL M+    +HTPLM+L K +TW L
Sbjct: 112 KGQGIKHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYAFQIHTPLMYLTKAQTWAL 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           A ++G    ++ I E++HTCY G          GC+ CP+C LR++G  E+ E
Sbjct: 172 ADEMGA---LDYIREQTHTCYNGIVG-------GCHECPSCVLRERGLAEYLE 214


>gi|317177457|dbj|BAJ55246.1| ExsB trans-regulatory protein [Helicobacter pylori F16]
          Length = 226

 Score =  148 bits (372), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 87/224 (38%), Positives = 137/224 (61%), Gaps = 8/224 (3%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            ++ FSGGQDS+T   WA  RF +V  + FDY Q++ VELEC   +   +     +    
Sbjct: 6   CVISFSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECAQKIASLL-----QLPYE 60

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           +     L       +  +S         Q+ +LPN+FVP RN IF+    + A ++G +N
Sbjct: 61  IIPLDFLENITHSALFKNSNDLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKIGASN 120

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           I +GV + D+SGYPDC+ D I++IE A+NLG  + + + TPLM+L K + +++A+D+G  
Sbjct: 121 IALGVSQADFSGYPDCKEDFIKSIENALNLGSNTAIKILTPLMFLNKAQEFQMAKDLGA- 179

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
             ++L+++E+HTCY G+R   + +GYGC+ CPAC LR+KG+ EF
Sbjct: 180 --LDLVIKETHTCYQGERKILHAYGYGCDECPACQLRKKGYEEF 221


>gi|150401201|ref|YP_001324967.1| exsB protein [Methanococcus aeolicus Nankai-3]
 gi|167016433|sp|A6UV33|QUEC_META3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|150013904|gb|ABR56355.1| exsB protein [Methanococcus aeolicus Nankai-3]
          Length = 234

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 52/240 (21%), Positives = 98/240 (40%), Gaps = 26/240 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+ + SGG DS+ C++ A      + +++FDYGQR   +        KK+ EL      
Sbjct: 2   KAVCVLSGGLDSAVCMAMAKSEGLELYSITFDYGQRAVKKEIIAS---KKLSELFGAV-- 56

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAM------------KIQDNNLPNTFVPGRNIIFLV 117
                 ++ L  + D S S+LTK                +     +   +VP RN+I   
Sbjct: 57  ----HKVVELPFVKDFSSSALTKKEEEVPTIKNSELDNLEKATETMEKVWVPARNMILFS 112

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
            ++  A  +    I  G+   + + +PD   + +    + +  G  + V + +PL    K
Sbjct: 113 ISSGFAEFVDAKYIYTGLNVEEGATFPDNTEEFLNRFNSVLEYGTLNKVKMKSPLYKYSK 172

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            E  K+ + +  +  V   L+ S++CY             C +C +C  R++ + E   +
Sbjct: 173 KEIVKIGKKLEEKLNVEF-LKYSYSCY----HDNKTDFLHCGTCESCMRRKRAFKEAGVE 227


>gi|166365323|ref|YP_001657596.1| transcription regulator ExsB-like protein [Microcystis aeruginosa
           NIES-843]
 gi|189038927|sp|B0JIA6|QUEC_MICAN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|166087696|dbj|BAG02404.1| transcription regulator ExsB homolog [Microcystis aeruginosa
           NIES-843]
          Length = 230

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 61/235 (25%), Positives = 108/235 (45%), Gaps = 26/235 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T  + AL    ++  LSF YGQR++ EL     +   +      
Sbjct: 1   MTKKAIILLSGGLDSATTAAIALAAGYQLIALSFRYGQRHERELAAAKKIANFLNIKEHH 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +       + L++ G  + +  +  +  + I  + +P T+VPGRN +F+  A +LA  
Sbjct: 61  LIE-------VNLSLWGGSALTDQSIAIPQEGINPDIIPITYVPGRNTVFISIALSLAEA 113

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYET 180
                I +G+   DYSGYPDCR + + A +T  NL  +         +  PL+   K + 
Sbjct: 114 REAEAIYLGINAVDYSGYPDCRPEYLDAFQTLANLSSKAGLEGKAPQLIAPLVMDSKVDI 173

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            + A  +G      + + ++ +CY G+ +        C  C +C +R +  +E  
Sbjct: 174 VRRAVSLG------VPIADTWSCYQGEVEP-------CGLCDSCRIRDQALIEAG 215


>gi|110825739|sp|Q58742|QUEC_METJA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
          Length = 232

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/244 (22%), Positives = 95/244 (38%), Gaps = 30/244 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMPKWK 68
            A+ + SGG DS+     A D    V  ++F+YGQR    E+     + + +        
Sbjct: 2   KAITVLSGGLDSTVVTLIAKDLGYEVTAITFNYGQRAAKREINSAKKICEILG------- 54

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQD----------NNLPNTFVPGRNIIFLVF 118
               E  ++ L  +     SSL     +                +   +VP RN+I    
Sbjct: 55  ---IEHIVVDLPFVKQFGKSSLITEKEIPTLKMEELDSEKAYETMKAVWVPARNVIMFGI 111

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
           A+  A  L    I IG+ + +   +PD   + + A    +  G  + V +  PL    K 
Sbjct: 112 ASGFAEALDAEKIFIGINKEEGVTFPDNTIEFVEAFNKVLEYGTLNKVKIEAPLYDKTKE 171

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM----EF 234
           E  KL  ++  +  V + L+ S++CY        E    C  C +C  R++ ++    E 
Sbjct: 172 EIVKLGAELEKKLGVEV-LKYSYSCY----HDNGEDFLHCGKCESCMRRKRAFLMAGVED 226

Query: 235 KEKY 238
           K KY
Sbjct: 227 KTKY 230


>gi|309379634|emb|CBX21805.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 218

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 90/236 (38%), Positives = 142/236 (60%), Gaps = 23/236 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
              AL++FSGGQDS+TCL  A+  +  + V  ++F YGQR+ VELE    + + +     
Sbjct: 3   NQQALVIFSGGQDSTTCLIQAVQTYGRENVRAITFQYGQRHAVELERAAWIAQDLG---- 58

Query: 66  KWKDSLGEDHILPLAILGDISHSS-LTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     ++ L ++  I+H++ + +  A++  +N +PNTFV GRN +FL++AA  A 
Sbjct: 59  ------VPQTLVDLNLMKTITHNALMDEAAAIETAENGVPNTFVDGRNALFLLYAAIYAK 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             GI +I+ GVCETD+SGYPDCR   ++++   +NL M+    +HTPLM+L K +TW LA
Sbjct: 113 GQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
            ++G   +++ I E++HTCY G          GC+ CP+C LR++G  E+ E   D
Sbjct: 173 DEMG---VLDYIREQTHTCYNGIVG-------GCHECPSCVLRERGLAEYLESIVD 218


>gi|317180475|dbj|BAJ58261.1| ExsB trans-regulatory protein [Helicobacter pylori F32]
          Length = 226

 Score =  147 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 88/224 (39%), Positives = 137/224 (61%), Gaps = 8/224 (3%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            ++ FSGGQDS+T   WA  RF +V  + FDY Q++ VELEC   +   +     +    
Sbjct: 6   CVISFSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECAQKIASLL-----QLPYE 60

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           +     L       +  +S         Q+ +LPN+FVP RN IF+    + A ++G +N
Sbjct: 61  IIPLDFLENITHSALFKNSNNLIGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKIGASN 120

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           I +GV + D+SGYPDC+ D I++IE A+NLG  + + + TPLM+L K + +++A+D+G  
Sbjct: 121 IALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKDLGA- 179

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
             ++LI++E+HTCY G+R   + +GYGC+ CPAC LR+KG+ EF
Sbjct: 180 --LDLIIKETHTCYQGERKILHAYGYGCDECPACQLRKKGYEEF 221


>gi|289582000|ref|YP_003480466.1| exsB protein [Natrialba magadii ATCC 43099]
 gi|289531553|gb|ADD05904.1| exsB protein [Natrialba magadii ATCC 43099]
          Length = 251

 Score =  147 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/238 (21%), Positives = 91/238 (38%), Gaps = 19/238 (7%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
            D       A++L SGG DS+T  + A  +   +  L   YGQR +      L   +++ 
Sbjct: 16  TDATDTNNRAVVLLSGGMDSATAAAEARSQGYDIYALHTSYGQRTET---RELECARQLA 72

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +          E   L       ++           +  + +P+++VP RN   L  A +
Sbjct: 73  DEFEANDFLQIETGHLSAIGASSLTD-DEMAVADADMDSDEIPSSYVPFRNANLLAMAVS 131

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYE 179
            A       + IG    D+SGYPDCR +   A E   ++G +    +++  P +   K +
Sbjct: 132 YAEANDCEAVFIGAHSEDFSGYPDCRPEFFEAFERVADVGTKPETEISIEAPFVEWSKTD 191

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                 ++G      +  E + +CY   +         C +C AC  R + +     +
Sbjct: 192 IAAHGTELG------VPYEHTWSCYRDDQP-------ACGTCDACAYRLQAFQRIGVR 236


>gi|110825738|sp|P44124|QUEC_HAEIN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
          Length = 228

 Score =  147 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 83/232 (35%), Positives = 141/232 (60%), Gaps = 24/232 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            A+++FSGGQDS+TCL  A+  +  + +E ++F YGQR+ +ELE    + + +       
Sbjct: 11  KAIVIFSGGQDSTTCLFQAIAEYGKENIEAITFQYGQRHAIELEKARTIAQDLG------ 64

Query: 68  KDSLGEDHILPLAILGDISHSS-LTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                +  ++  +++  I+H++ + +   ++ ++N LPNTFV GRN +FL++AA  A   
Sbjct: 65  ----IKQTLIDTSVMKAITHNALMDEQAHIEQKENELPNTFVDGRNALFLLYAAIYAKGQ 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV-HTPLMWLKKYETWKLAQ 185
           GI +I+ GVCETD+SGYPDCR   I+++   +NL M+  + +  TPLM+L K +TW+LA 
Sbjct: 121 GIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYPIPISKTPLMYLTKAQTWQLAD 180

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           ++G   +++ + + +HTCY G          GC  CP+C LR KG  ++  +
Sbjct: 181 ELG---VLDYVQKHTHTCYEGIEG-------GCRKCPSCILRNKGLKKYLTQ 222


>gi|311696705|gb|ADP99578.1| ExsB protein [marine bacterium HP15]
          Length = 209

 Score =  147 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 52/223 (23%), Positives = 89/223 (39%), Gaps = 27/223 (12%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS T L  A +R  +V  LSF+YGQR+  ELEC   V + +               ++ 
Sbjct: 1   MDSYTLLHLARERGYQVHALSFNYGQRHVRELECARSVCEALG----------VPHKVID 50

Query: 79  LAILGDIS----HSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
           +  + ++      +S         +++++  T VP RN+I L  A   A   G   +  G
Sbjct: 51  IRAMSEVMAGSSLTSDIDVPEGHYEEDSMKATVVPNRNMILLSLATGYAVTAGAGAVWYG 110

Query: 135 VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVN 194
               D++ YPDCR + +  ++    +     V +  P M + K +       +G      
Sbjct: 111 AHGGDHAIYPDCRPEFVDKMDAVCRVANYEPVGIEAPFMTMDKGQILAEGLRLG------ 164

Query: 195 LILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           L   ++ TCY G+          C  C +C  R + +     K
Sbjct: 165 LDYAQTWTCYNGRE-------RACGRCGSCVERLEAFAANGVK 200


>gi|268609644|ref|ZP_06143371.1| queuosine biosynthesis protein QueC [Ruminococcus flavefaciens
           FD-1]
          Length = 228

 Score =  147 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 94/235 (40%), Gaps = 26/235 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            AL+LFSGG DSSTCL+ A+ ++  + V  LS  YGQ++  E++    + K         
Sbjct: 2   KALVLFSGGLDSSTCLALAVKKYGAENVVALSIYYGQKHNKEIQAAEKLVKYYGVTWKTL 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQ-----DNNLPNTFVPGRNIIFLVFAATL 122
             +     I   +    ++ S          +     D    +T+VP RN +FL  AA++
Sbjct: 62  DLAP----IFADSDCSLLTQSDKEIPKETYAEQLEETDGKPVSTYVPFRNGLFLASAASI 117

Query: 123 AYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           A       I  G    D +G  YPDC      A+  AI  G    + +  P + L K + 
Sbjct: 118 ALSNDCEVIYYGAHSDDAAGNAYPDCSAKFNNAMNEAIFTGSGEQLRIEAPFVDLNKADV 177

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            ++  ++      N+  E + +CY G           C  C  C  R   +    
Sbjct: 178 VRMGTEL------NVPYEMTWSCYEGGDKP-------CGVCGTCRDRIAAFEANG 219


>gi|255065046|ref|ZP_05316901.1| ExsB protein [Neisseria sicca ATCC 29256]
 gi|255050467|gb|EET45931.1| ExsB protein [Neisseria sicca ATCC 29256]
          Length = 219

 Score =  147 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 90/233 (38%), Positives = 142/233 (60%), Gaps = 23/233 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +   AL++FSGGQDS+TCL  A+  +  + V+ ++F YGQR+ VELE    + + +    
Sbjct: 2   QNQQALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAVELERARWIAQDLG--- 58

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                   +  +L L+++  I+H++L  +  A++   + LPNTFV GRN +FL++AA  A
Sbjct: 59  -------VKQTVLDLSLMQQITHNALMDDTAAIETASDGLPNTFVDGRNALFLLYAAIYA 111

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              GI +I+ GVCETD+SGYPDCR   ++++   +NL M+    +HTPLM+L K +TW L
Sbjct: 112 KGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYAFQIHTPLMYLTKAQTWAL 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           A ++G    ++ I E++HTCY            GC+ CP+C LR++G  E+ E
Sbjct: 172 ADEMGA---LDYIREQTHTCYNSIVG-------GCHECPSCVLRERGLAEYLE 214


>gi|51473874|ref|YP_067631.1| trans-regulatory protein ExsB [Rickettsia typhi str. Wilmington]
 gi|81389982|sp|Q68W43|QUEC_RICTY RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|51460186|gb|AAU04149.1| trans-regulatory protein ExsB [Rickettsia typhi str. Wilmington]
          Length = 227

 Score =  147 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 29/241 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             ++ L SGG DS+T L+ A +    +  +SF+YGQRN  EL+    + KK      K  
Sbjct: 2   KKSVNLLSGGIDSATVLAIASEMCYEIHAMSFNYGQRNHAELQKVKELIKKYNVKQHKIV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT----FVPGRNIIFLVFAATLAY 124
           D       + L   G  + +    ++      N LP      +VP RN IFL +A   A 
Sbjct: 62  D-------IDLRAFGGSALTDDNIDIPHYHSINELPEIVPVTYVPARNTIFLSYALGFAE 114

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYE 179
            +G  +I IGV  +D + YPDCR + I++ E  +N+     +      +H PL+ + K +
Sbjct: 115 VIGAQDIFIGVHTSDSANYPDCRPEYIKSFEKMVNVATNMGIQGKKITIHAPLIDMTKEQ 174

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
             +    +G      +  + + +CY    D        C +C AC +R   +   K   Q
Sbjct: 175 IIRTGLKLG------VDYKNTISCYTPTEDDLS-----CGNCLACIIRLDAFK--KNNIQ 221

Query: 240 D 240
           D
Sbjct: 222 D 222


>gi|15669538|ref|NP_248349.1| ExsB [Methanocaldococcus jannaschii DSM 2661]
 gi|1591989|gb|AAB99356.1| ExsB [Methanocaldococcus jannaschii DSM 2661]
          Length = 235

 Score =  147 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/244 (22%), Positives = 95/244 (38%), Gaps = 30/244 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMPKWK 68
            A+ + SGG DS+     A D    V  ++F+YGQR    E+     + + +        
Sbjct: 5   KAITVLSGGLDSTVVTLIAKDLGYEVTAITFNYGQRAAKREINSAKKICEILG------- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQD----------NNLPNTFVPGRNIIFLVF 118
               E  ++ L  +     SSL     +                +   +VP RN+I    
Sbjct: 58  ---IEHIVVDLPFVKQFGKSSLITEKEIPTLKMEELDSEKAYETMKAVWVPARNVIMFGI 114

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
           A+  A  L    I IG+ + +   +PD   + + A    +  G  + V +  PL    K 
Sbjct: 115 ASGFAEALDAEKIFIGINKEEGVTFPDNTIEFVEAFNKVLEYGTLNKVKIEAPLYDKTKE 174

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM----EF 234
           E  KL  ++  +  V + L+ S++CY        E    C  C +C  R++ ++    E 
Sbjct: 175 EIVKLGAELEKKLGVEV-LKYSYSCY----HDNGEDFLHCGKCESCMRRKRAFLMAGVED 229

Query: 235 KEKY 238
           K KY
Sbjct: 230 KTKY 233


>gi|157804083|ref|YP_001492632.1| trans-regulatory protein ExsB [Rickettsia canadensis str. McKiel]
 gi|167016449|sp|A8EZR4|QUEC_RICCK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|157785346|gb|ABV73847.1| Trans-regulatory protein ExsB [Rickettsia canadensis str. McKiel]
          Length = 227

 Score =  147 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 63/234 (26%), Positives = 106/234 (45%), Gaps = 27/234 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              + L SGG DS+T L+ A      +  +SF+YGQRN  E        +K+ EL+ ++ 
Sbjct: 2   KKLVNLVSGGADSATVLAIAQKMGYEIYAMSFNYGQRNNAE-------LRKVRELVKEYN 54

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQ----DNNLPNTFVPGRNIIFLVFAATLAY 124
               +   + L      + +    +V          +++P T+VP RN IFL +A   A 
Sbjct: 55  VKQHKIVNIDLRAFSGSALTDNNISVPHYHDVNELPDDVPVTYVPARNTIFLSYALGFAE 114

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYE 179
            +G  +I IGV  +D + YPDCR + I++ E   NL     V      +HTPL+ + K +
Sbjct: 115 VIGAKDIFIGVHTSDSANYPDCRPEYIKSFEEMANLATNMGVQGKKITIHTPLIDMTKEQ 174

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
             +   ++G      +  + + +CY    D        C +C AC +R   + +
Sbjct: 175 IIRTGLELG------VDYKNTISCYEPTEDDLS-----CGTCLACMIRLDAFKK 217


>gi|329119474|ref|ZP_08248159.1| transcription regulator ExsB [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327464407|gb|EGF10707.1| transcription regulator ExsB [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 384

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 94/234 (40%), Positives = 142/234 (60%), Gaps = 23/234 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
            +  AL++FSGGQDS+TCL  A+  +  + V+T+SF YGQR+ VELE    + +      
Sbjct: 2   NSEKALVIFSGGQDSTTCLIQAIQTYGRENVQTISFQYGQRHAVELERARSIAQ------ 55

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
               D   +  IL L+++  I+ ++LT N  A++   N LPNTFV GRN +FL++AA  A
Sbjct: 56  ----DWGVKQTILDLSLIKHITQNALTDNTAAIQTAANGLPNTFVDGRNALFLLYAAICA 111

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
               I +I+ GVCETD+SGYPDCR   ++++   +NL M+    +HTPLM+L K +TW+L
Sbjct: 112 KGQNIRHIITGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYPFQIHTPLMYLTKAQTWEL 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           A  +G    ++ I + +HTCY G          GC+ CPAC LR++G  ++ + 
Sbjct: 172 ADKLGC---LDYIRDHTHTCYNGVIG-------GCHQCPACQLRERGLAQYLQN 215


>gi|327312420|ref|YP_004327857.1| queuosine biosynthesis protein QueC [Prevotella denticola F0289]
 gi|326944366|gb|AEA20251.1| queuosine biosynthesis protein QueC [Prevotella denticola F0289]
          Length = 230

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 55/241 (22%), Positives = 96/241 (39%), Gaps = 28/241 (11%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           + +   +   ++++ SGG DS T L    +       +SFDYGQ +           K++
Sbjct: 6   LQEKTDQMKDSVIIVSGGLDSITLLYDRAET--IALAVSFDYGQNHG---------AKEL 54

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFL 116
                  +        +PL+ +     SSL             + N+ +T VP RN I L
Sbjct: 55  PFAAHHCRKLGIPHITIPLSFMHRFFKSSLLDGAEAIPEGHYAEENMKSTVVPFRNGIML 114

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
             A  +A   G+  + I     D++ YPDCR D I+A++ A   G   +V +  P   + 
Sbjct: 115 AIATGIAESHGLRRVYIANHGGDHTIYPDCRPDFIQAMDGAATAGTFVNVRIEAPYTNIT 174

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           K +  +    +G      +   ++ +CY G           C  C  C  R++ ++E   
Sbjct: 175 KADIVRRGTALG------VDYSKTWSCYKGSD-------VHCGKCGTCVERKEAFLEAGV 221

Query: 237 K 237
           K
Sbjct: 222 K 222


>gi|261401301|ref|ZP_05987426.1| ExsB protein [Neisseria lactamica ATCC 23970]
 gi|269208680|gb|EEZ75135.1| ExsB protein [Neisseria lactamica ATCC 23970]
          Length = 218

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 91/236 (38%), Positives = 141/236 (59%), Gaps = 23/236 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
              AL++FSGGQDS+TCL  A+  +  + V  ++F YGQR+ VELE    + + +     
Sbjct: 3   NQQALVIFSGGQDSTTCLIQAVQTYGRENVRAITFQYGQRHAVELERAAWIAQDLG---- 58

Query: 66  KWKDSLGEDHILPLAILGDISHSS-LTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     ++ L ++  I+H++ + +  A++  DN +PNTFV GRN +FL++AA  A 
Sbjct: 59  ------VPQTLVDLNLMKTITHNALMDEAAAIETVDNGVPNTFVDGRNALFLLYAAIHAK 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             GI +I+ GVCETD+SGYPDCR   ++++   +NL M+    +HTPLM+L K +TW LA
Sbjct: 113 GQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
            ++G    ++ I E++HTCY G          GC+ CP+C LR++G  E+ E   D
Sbjct: 173 DEMGA---LDYIREQTHTCYNGIVG-------GCHECPSCILRERGLAEYLESIVD 218


>gi|207092521|ref|ZP_03240308.1| hypothetical protein HpylHP_06375 [Helicobacter pylori
           HPKX_438_AG0C1]
 gi|207108661|ref|ZP_03242823.1| hypothetical protein HpylH_03964 [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 228

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 88/226 (38%), Positives = 139/226 (61%), Gaps = 8/226 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           + FSGGQDS+T   WA  RF +V  + FDY Q++ VELEC   +   +     +    + 
Sbjct: 8   ISFSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECAQKIASLL-----QLPYEII 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
               L       +  +S         Q+ +LPN+FVP RN IF+    + A ++G +NI 
Sbjct: 63  SLDFLENITRSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKIGASNIA 122

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
           +GV + D+SGYPDC+ D I++IE A+NLG  + + + TPLM+L K + +++A+D+G   +
Sbjct: 123 LGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKDLG---V 179

Query: 193 VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
           ++L+++E+HTCY G+R   + +GYGC+ CPAC LR+KG+ EF+ K 
Sbjct: 180 LDLVIKETHTCYQGERKILHAYGYGCDECPACQLRKKGYEEFQTKV 225


>gi|159026229|emb|CAO86385.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 225

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 61/235 (25%), Positives = 106/235 (45%), Gaps = 26/235 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T  + A+    ++  LSF YGQR++ EL     +   +      
Sbjct: 1   MTKKAIILLSGGLDSATTAAIAIAAGYQLIALSFRYGQRHERELAAAKKIANFLNIKEHH 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +       + L++ G  + +  +  +  + I  N +P T+VPGRN +F+  A +LA  
Sbjct: 61  LIE-------VNLSLWGGSALTDQSIAIPQEGINPNIIPITYVPGRNTVFISIALSLAEA 113

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYET 180
                I +G+   DYSGYPDCR   + A +T  NL  +         +  PL+   K + 
Sbjct: 114 RAAEAIYLGINAVDYSGYPDCRPQYLEAFQTLANLSSKAGLEGKAPQLIAPLVMDSKVDI 173

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            + A  +G      + + ++ +CY G+          C  C +C +R +  +E  
Sbjct: 174 VRRAVSLG------VPIADTWSCYQGEVKP-------CGLCDSCRIRDQALIEAG 215


>gi|261380021|ref|ZP_05984594.1| ExsB protein [Neisseria subflava NJ9703]
 gi|284797228|gb|EFC52575.1| ExsB protein [Neisseria subflava NJ9703]
          Length = 219

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 89/231 (38%), Positives = 143/231 (61%), Gaps = 23/231 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +   AL++FSGGQDS+TCL  A+  +  + V+ ++F YGQR+ +ELE    + + +    
Sbjct: 2   EKQQALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAIELERARWIAQDLG--- 58

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                   +  +L L+++  I+H++L  + V+++   + LPNTFV GRN +FL++AA  A
Sbjct: 59  -------VKQTVLDLSLMQQITHNALMDDTVSIETASDGLPNTFVDGRNALFLLYAAIYA 111

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              GI +I+ GVCETD+SGYPDCR   ++++   +NL M+    +HTPLM+L K +TW L
Sbjct: 112 KGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYAFQIHTPLMYLTKAQTWAL 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           A ++G   +++ I E +HTCY G          GC+ CP+C LR++G  E+
Sbjct: 172 ADEMG---VLDYIREHTHTCYNGVVG-------GCHECPSCILRERGLSEY 212


>gi|313668995|ref|YP_004049279.1| queuosine biosynthesis protein QueC [Neisseria lactamica ST-640]
 gi|313006457|emb|CBN87920.1| queuosine biosynthesis protein QueC (ec 3.5.-.-) [Neisseria
           lactamica 020-06]
          Length = 219

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 88/232 (37%), Positives = 139/232 (59%), Gaps = 23/232 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
              AL++FSGGQDS+TCL  A+  +  + V  ++F YGQR+ VELE    + + +     
Sbjct: 3   NQQALVIFSGGQDSTTCLIQAVQTYGRENVRAITFQYGQRHAVELERAAWIAQDLG---- 58

Query: 66  KWKDSLGEDHILPLAILGDISHSS-LTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     ++ L ++  I+H++ + +  +++   N +PNTFV GRN +FL++AA  A 
Sbjct: 59  ------VPQTLVDLNLMKTITHNALMDEAASIETAGNGVPNTFVDGRNALFLLYAAIYAK 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             GI +I+ GVCETD+SGYPDCR   ++++   +NL M+    +HTPLM+L K +TW LA
Sbjct: 113 GQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPLMYLTKAQTWALA 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            ++G    ++ I E++HTCY G          GC+ CP+C LR++G  E+ E
Sbjct: 173 DEMGA---LDYIREQTHTCYNGIVG-------GCHECPSCILRERGLAEYLE 214


>gi|222475966|ref|YP_002564487.1| exsB protein [Halorubrum lacusprofundi ATCC 49239]
 gi|222454337|gb|ACM58601.1| exsB protein [Halorubrum lacusprofundi ATCC 49239]
          Length = 229

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 54/236 (22%), Positives = 99/236 (41%), Gaps = 27/236 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKI--VELM 64
             SA++L SGG DS+T +  A+++      L   YGQR +  E EC   + +++   + +
Sbjct: 3   NKSAVILVSGGMDSATAVYEAIEQGYEPYFLHTSYGQRTEDKEYECAKALAEEVDAADFL 62

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNV-AMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                         L+ +G  S +     V    ++ + +P ++VP RN   L  A + A
Sbjct: 63  HIETGH--------LSQIGASSLTDEEMEVADADMESDEIPTSYVPFRNANLLSMATSYA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETW 181
                  + IG    D+SGYPDCR     A +  I++G +    + +  P +   K E  
Sbjct: 115 EATESEALFIGAHSEDFSGYPDCRPAFFDAFQNVIDVGTKPETAIELKAPFVEWSKTEIA 174

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           K   ++      ++  + + +CY  +          C +C AC  R + +     +
Sbjct: 175 KRGLEL------DVPYDMTWSCYRDEEP-------ACGTCDACAFRLEAFRNAGSR 217


>gi|222823734|ref|YP_002575308.1| ExsB family transcriptional regulator [Campylobacter lari RM2100]
 gi|222538956|gb|ACM64057.1| transcriptional regulator, ExsB family [Campylobacter lari RM2100]
          Length = 221

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 74/236 (31%), Positives = 110/236 (46%), Gaps = 29/236 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKW 67
             AL + SGG DS+ C   A      +  L FDY QR    E EC   + +K+       
Sbjct: 2   KKALCIISGGMDSTLCAYLAKKEGYEIIALHFDYNQRTMLKERECFNKICEKL------- 54

Query: 68  KDSLGEDHILPLAILGDISHSSLT----KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
             ++   +IL ++ + +I  +SLT    +    K+ +  +PNT+VP RN IFL  A  +A
Sbjct: 55  --NIKTKYILDVSFIANIGGNSLTDLNLEIPKEKLHEKEVPNTYVPFRNGIFLSIAGAIA 112

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG--MESHVTVHTPLMWLKKYETW 181
            +    +I IGV + D SGYPDC  + I+     IN G     +V + TPL+ L K +  
Sbjct: 113 EKEKCESIFIGVVQEDSSGYPDCSANFIQKASEFINEGTTKTCNVAIKTPLVHLSKGQIV 172

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +LA          + LE + +CY  +          C  C +C LR KG+ E   K
Sbjct: 173 ELALK------EKVALECTWSCYEREDK-------ACGKCDSCLLRLKGFKEANVK 215


>gi|256810146|ref|YP_003127515.1| exsB protein [Methanocaldococcus fervens AG86]
 gi|256793346|gb|ACV24015.1| exsB protein [Methanocaldococcus fervens AG86]
          Length = 232

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 28/243 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+ + SGG DS+     A +    +  ++F+YGQ+            KKI E++     
Sbjct: 2   KAVTVLSGGLDSTVSTLIAKNLGYEITAITFNYGQKAVKREINAS---KKICEILDI--- 55

Query: 70  SLGEDHILPLAILGDISHSS----------LTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                 ++ L  +     SS            +++  +     +   +VP RN+I L  A
Sbjct: 56  ---NHIVVDLPFIKQFKKSSLITENEIPSLKIEDLDSEKAHETMKTVWVPARNLIMLSIA 112

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           +  A  L    + IG+ + +   +PD   + + A+  A+  G  + V +  PL    K E
Sbjct: 113 SGFAEALDAEKVFIGINKEEGLTFPDNTIEFVDALNKALEYGTLNKVKIEAPLYDKTKEE 172

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM----EFK 235
             K+ ++I  +  + + L+ S++CY        E    C  C +C  R++ ++    E K
Sbjct: 173 IVKIGREIEKKLGLEV-LKYSYSCYK----DNGEDFLHCGECESCMRRKRAFLMAGVEDK 227

Query: 236 EKY 238
            +Y
Sbjct: 228 TRY 230


>gi|319639271|ref|ZP_07994022.1| queuosine biosynthesis protein queC [Neisseria mucosa C102]
 gi|317399455|gb|EFV80125.1| queuosine biosynthesis protein queC [Neisseria mucosa C102]
          Length = 219

 Score =  146 bits (368), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 90/233 (38%), Positives = 143/233 (61%), Gaps = 23/233 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +   AL++FSGGQDS+TCL  A+  +  + V+ ++F YGQR+ +ELE    + + +    
Sbjct: 2   EKQQALVIFSGGQDSTTCLIQAIQTYGLENVQAITFQYGQRHAIELERARWIAQDLG--- 58

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                   +  +L L+++  I+H++L  +  A++   + LPNTFV GRN +FL++AA  A
Sbjct: 59  -------VKQTVLDLSLMQQITHNALMDDTAAIETASDGLPNTFVDGRNALFLLYAAIYA 111

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              GI +I+ GVCETD+SGYPDCR   ++++   +NL M+    +HTPLM+L K +TW L
Sbjct: 112 KGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYAFQIHTPLMYLTKAQTWAL 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           A ++G   +++ I E +HTCY G          GC+ CP+C LR++G  E+ E
Sbjct: 172 ADEMG---VLDYIREHTHTCYNGVVG-------GCHECPSCILRERGLSEYLE 214


>gi|303244970|ref|ZP_07331294.1| exsB protein [Methanothermococcus okinawensis IH1]
 gi|302484681|gb|EFL47621.1| exsB protein [Methanothermococcus okinawensis IH1]
          Length = 233

 Score =  146 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 53/239 (22%), Positives = 98/239 (41%), Gaps = 25/239 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+ + SGG DS   +  A     ++  ++FDYGQR          V ++I       + 
Sbjct: 2   KAVCILSGGLDSVVSMMVAKKETSKLYAITFDYGQRA---------VLREINASKKVSEI 52

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNN-----------LPNTFVPGRNIIFLVF 118
              +  ++ L  + + S+S+LTK+  +     +           + + +VP RN+I    
Sbjct: 53  LGAQHKVIKLPFIKEFSNSALTKDKNIPTIKEHELDNIEKATETMKSVWVPARNMILFSI 112

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
           A+  A  +G   I  G+   + + +PD   + I      +  G  + V +  PL  L K 
Sbjct: 113 ASGFAEFIGADEIYTGLNREEGTTFPDNTKEFIDRFNNVLEYGTLNKVKMRAPLYNLNKT 172

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           E  KL + +     + + L+ S++CY        E    C  C +C  R++ + E    
Sbjct: 173 EIVKLGKKLEKDLGLEV-LKYSYSCYR----DNGEDFLHCGKCESCMRRKRAFKEAGIN 226


>gi|119357731|ref|YP_912375.1| exsB protein [Chlorobium phaeobacteroides DSM 266]
 gi|167016422|sp|A1BHS4|QUEC_CHLPD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|119355080|gb|ABL65951.1| exsB protein [Chlorobium phaeobacteroides DSM 266]
          Length = 226

 Score =  146 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 58/231 (25%), Positives = 97/231 (41%), Gaps = 21/231 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DS    + A  +   +  +  +YGQR   +      +      +  + + 
Sbjct: 2   KAVVLLSGGMDSLVTTAIANAQGFELAAMHVNYGQRTWHKELEAFRLIADHYAIGERLEI 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKI-QDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +        LA +G  S +  +  ++    Q  ++P ++VP RN  FL  A + A  +G 
Sbjct: 62  NADY-----LAQIGGSSLTDYSMPISGADLQGLSIPTSYVPFRNAGFLSMAVSWAEVIGA 116

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKLAQD 186
             I IG  E D SGYPDCR     A    I LG +    + + TPL+ ++K E  +   +
Sbjct: 117 ERIFIGAVEEDSSGYPDCRKVFYDAFNAVIALGTKPETSIAIMTPLIEMQKSEIVRKGME 176

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +          E S +CY  +       G  C  C +C LR + +     +
Sbjct: 177 LTA------PFELSWSCYKSE-------GKACGVCDSCALRLRAFERAGMR 214


>gi|157828917|ref|YP_001495159.1| trans-regulatory protein ExsB [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165933642|ref|YP_001650431.1| queuosine biosynthesis protein [Rickettsia rickettsii str. Iowa]
 gi|167016450|sp|A8GTC6|QUEC_RICRS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|189038938|sp|B0BUW5|QUEC_RICRO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|157801398|gb|ABV76651.1| trans-regulatory protein ExsB [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165908729|gb|ABY73025.1| queuosine biosynthesis protein [Rickettsia rickettsii str. Iowa]
          Length = 228

 Score =  146 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 64/243 (26%), Positives = 105/243 (43%), Gaps = 29/243 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T L         +  LSF+Y +RN +E++    + K       +
Sbjct: 1   MKKKAVILLSGGPDSTTVLEIVSKTDYEIYALSFNYHRRNSLEVQKIQGLIKDYNVKQHR 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT----FVPGRNIIFLVFAATL 122
             +       + L      + +    +V      + LP+     +VP RN IFL +A  +
Sbjct: 61  VIN-------IDLQSFIGSALTDDNIDVPKFKNTDQLPSDIPVTYVPARNTIFLSYALGV 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKK 177
           A  +G  +I IGV   DY+ YPDCR + I++ E   NL          +T+H PL+ + K
Sbjct: 114 AEVIGARDIFIGVHTNDYTNYPDCRPEYIKSFEAMANLATRVGVNGEKITIHAPLINMTK 173

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            +  K   ++G      +   ++ +CY    D     G  C  C +C +R   +   K  
Sbjct: 174 EQIIKKGLELG------VDYSKTISCYDPTED-----GLSCGQCLSCIVRLDAFK--KNN 220

Query: 238 YQD 240
            QD
Sbjct: 221 VQD 223


>gi|327398275|ref|YP_004339144.1| exsB protein [Hippea maritima DSM 10411]
 gi|327180904|gb|AEA33085.1| exsB protein [Hippea maritima DSM 10411]
          Length = 239

 Score =  146 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 77/238 (32%), Positives = 112/238 (47%), Gaps = 28/238 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++++SGG DS+TCL WALD FD V T++F Y QR+ +E++      KK +EL  + K
Sbjct: 2   KKAVIIYSGGLDSTTCLFWALDEFDEVHTITFYYAQRHSIEVDFS----KKTLELAQRIK 57

Query: 69  DSLGEDH--ILPLAILGDISHSSLTKNVAMKIQDN----NLPNTFVPGRNIIFLVFAATL 122
           +   + H   + L+ +G  + +  + +V     +      +P T+VP RN +FL   A L
Sbjct: 58  NKTIKSHYFSIDLSQIGGSALTDPSIDVPKNRDEEKISSEIPITYVPFRNGVFLSITAAL 117

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG-----MESHVTVHTPLMWLKK 177
           A +  I NI+ G    DYSGYPDCR D + A E AIN G           + TPL+ + K
Sbjct: 118 AEKNEIYNIIGGWNMLDYSGYPDCRDDFLTAFEKAINYGTKAGSQGKTFKILTPLLKMNK 177

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            +     +  G                          G  C  C AC LR KG+ E  
Sbjct: 178 AQIILFGKKHGADYSY-------------SYSCYSGDGIPCGECDACILRAKGFKEAG 222


>gi|208434560|ref|YP_002266226.1| ExsB trans-regulatory protein [Helicobacter pylori G27]
 gi|254764352|sp|B5Z711|QUEC_HELPG RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|208432489|gb|ACI27360.1| ExsB trans-regulatory protein [Helicobacter pylori G27]
          Length = 226

 Score =  146 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 87/229 (37%), Positives = 140/229 (61%), Gaps = 8/229 (3%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            ++ FSGGQDS+T   WA  RF +V  + FDY Q++ VELEC   +   +     +    
Sbjct: 6   CVIGFSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECAQKIASLL-----QLPYE 60

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           +     L       +  +S         Q+ +LPN+FVP RN IF+    + A ++G +N
Sbjct: 61  IISLDFLENITRSALFKNSNDLMGYSHAQNKDLPNSFVPNRNAIFITLLHSYAQKIGASN 120

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           I +GV + D+SGYPDC+ D I++IE A+NLG  + + + TPLM+L K + +++A+D+G  
Sbjct: 121 IALGVSQADFSGYPDCKEDFIKSIEHALNLGSNTAIKILTPLMFLNKAQEFQMAKDLG-- 178

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
            +++L+++E+HTCY G+R   + +GYGC+ CPAC LR+KG+ EF+   +
Sbjct: 179 -VLDLVIKETHTCYQGERKILHAYGYGCDECPACQLRKKGYEEFQANKK 226


>gi|299139077|ref|ZP_07032253.1| exsB protein [Acidobacterium sp. MP5ACTX8]
 gi|298598757|gb|EFI54919.1| exsB protein [Acidobacterium sp. MP5ACTX8]
          Length = 236

 Score =  145 bits (366), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 65/235 (27%), Positives = 93/235 (39%), Gaps = 20/235 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            P A++  SGG DS+ C + A  R      L F YGQR +             V L    
Sbjct: 3   RPKAVVCLSGGMDSTVCAALA-ARDYESYGLHFSYGQRTEARELASARAVAAAVGLHDLL 61

Query: 68  KDSLGEDHIL-----PLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +        +       + +          +       + +P T+VP RN  FL  A + 
Sbjct: 62  ELKTDLFRRIGGSALTDSSIAVPEAGDENADETSHRTGSEVPVTYVPFRNAHFLSAAVSW 121

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-HVTVHTPLMWLKKYETW 181
           A  LG T + IG  E D SGYPDCR     A    I  G +   + V TPL+ L+K E  
Sbjct: 122 AEVLGATTVFIGAVEQDSSGYPDCRPAYYEAFNQLIRTGTKEGEIAVVTPLIRLRKSEIV 181

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           +L  ++G        L  S +CY G+ +        C  C +C LR + + E   
Sbjct: 182 RLGVELGA------PLHVSWSCYSGETE-------ACGVCESCVLRLRAFAEAGA 223


>gi|34581313|ref|ZP_00142793.1| trans-regulatory protein ExsB [Rickettsia sibirica 246]
 gi|28262698|gb|EAA26202.1| trans-regulatory protein ExsB [Rickettsia sibirica 246]
          Length = 228

 Score =  145 bits (366), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 64/243 (26%), Positives = 104/243 (42%), Gaps = 29/243 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T L         +  LSF+Y +RN +E++    + K       +
Sbjct: 1   MKKKAVILLSGGPDSTTVLEIVSKTDYEIYALSFNYHRRNSLEVQKIQGLIKDYNVKQHR 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT----FVPGRNIIFLVFAATL 122
             +       + L      + +    +V      + LP+     +VP RN IFL +A  +
Sbjct: 61  VIN-------IDLRSFIGSALTDDNIDVPKFKNTDQLPSDIPVTYVPARNTIFLSYALGV 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKK 177
           A  +G  +I IGV   DY+ YPDCR + I++ E   NL          +T+H PL+ + K
Sbjct: 114 AEVIGARDIFIGVHTNDYTNYPDCRPEYIKSFEAMANLATRVGVNGEKITIHAPLINMTK 173

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            +  K   ++G      +   ++ +CY    D     G  C  C +C  R   +   K  
Sbjct: 174 EQIIKKGLELG------VDYSKTISCYDPTED-----GLSCGQCLSCIARLDAFK--KNN 220

Query: 238 YQD 240
            QD
Sbjct: 221 VQD 223


>gi|15892993|ref|NP_360707.1| trans-regulatory protein ExsB [Rickettsia conorii str. Malish 7]
 gi|81527957|sp|Q92GQ2|QUEC_RICCN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|15620191|gb|AAL03608.1| trans-regulatory protein ExsB [Rickettsia conorii str. Malish 7]
          Length = 228

 Score =  145 bits (365), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 64/243 (26%), Positives = 104/243 (42%), Gaps = 29/243 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T L         +  LSF+Y +RN +E++    + K       +
Sbjct: 1   MKKKAVILLSGGPDSTTVLEIVSKTDYEIYALSFNYHRRNSLEVQKIQGLIKDYNVKQHR 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT----FVPGRNIIFLVFAATL 122
             +       + L      + +    +V      + LP+     +VP RN IFL +A  +
Sbjct: 61  VIN-------IDLQSFIGSALTDDNIDVPKFQNTDQLPSDIPVTYVPARNTIFLSYALGV 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKK 177
           A  +G  +I IGV   DY+ YPDCR + I++ E   NL          +T+H PL+ + K
Sbjct: 114 AEVIGARDIFIGVHTNDYTNYPDCRPEYIKSFEAMANLATRVGVNGEKITIHAPLINMTK 173

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            +  K   ++G      +   ++ +CY    D     G  C  C +C  R   +   K  
Sbjct: 174 EQIIKKGLELG------VDYSKTISCYDPTED-----GLSCGQCLSCIARLDAFK--KNN 220

Query: 238 YQD 240
            QD
Sbjct: 221 VQD 223


>gi|313126239|ref|YP_004036509.1| preq(0) biosynthesis protein quec [Halogeometricum borinquense DSM
           11551]
 gi|312292604|gb|ADQ67064.1| preQ(0) biosynthesis protein QueC [Halogeometricum borinquense DSM
           11551]
          Length = 236

 Score =  145 bits (365), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 51/241 (21%), Positives = 99/241 (41%), Gaps = 24/241 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKK 59
           M D      +A++L SGG DS+T    A  R   +  L   YGQ+ +  E +C   + ++
Sbjct: 1   MTDS-DDRQTAVVLLSGGMDSATTAYEAKARGYDLYCLHTSYGQKTETKEYDCATQLAEE 59

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAM-KIQDNNLPNTFVPGRNIIFLVF 118
           +        +         L+ +G  S +    +V    +    +P ++VP RN   L  
Sbjct: 60  LDA------EEFLHIETDHLSDIGASSLTDDEIDVEDADMDAEEIPTSYVPFRNANLLSM 113

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLK 176
           A + A       + +G    DY+GYPDCR +   A E  ++ G +   ++ +  P +   
Sbjct: 114 AVSFAEANDCDAVFVGAHSEDYAGYPDCRPEFFEAFEAMVDTGTKPETNIDIEVPFVTDS 173

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           K +  +  +++      ++  E + +CY  +          C +C +C  R + +     
Sbjct: 174 KTDIAQRGREL------DVPFEHTWSCYRAEEP-------ACGTCDSCAYRLQAFRNVGM 220

Query: 237 K 237
           +
Sbjct: 221 R 221


>gi|225076556|ref|ZP_03719755.1| hypothetical protein NEIFLAOT_01604 [Neisseria flavescens
           NRL30031/H210]
 gi|224952056|gb|EEG33265.1| hypothetical protein NEIFLAOT_01604 [Neisseria flavescens
           NRL30031/H210]
          Length = 219

 Score =  145 bits (365), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 89/233 (38%), Positives = 142/233 (60%), Gaps = 23/233 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +   AL++FSGGQDS+TCL  A+  +  + V+ ++F YGQR+ +ELE    + + +    
Sbjct: 2   EKQQALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHAIELERARWIAQDLG--- 58

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                   +  +L L+++  I+H++L  +  +++   + LPNTFV GRN +FL++AA  A
Sbjct: 59  -------VKQRVLDLSLMQQITHNALMDDTASIETASDGLPNTFVDGRNALFLLYAAIYA 111

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              GI +I+ GVCETD+SGYPDCR   ++++   +NL M+    +HTPLM+L K +TW L
Sbjct: 112 KGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYAFQIHTPLMYLTKAQTWAL 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           A ++G    ++ I E +HTCY G          GC+ CP+C LR++G  E+ E
Sbjct: 172 ADEMGA---LDYICEHTHTCYNGVVG-------GCHECPSCILRERGLSEYLE 214


>gi|237737357|ref|ZP_04567838.1| succinoglycan biosynthesis regulator [Fusobacterium mortiferum ATCC
           9817]
 gi|229421219|gb|EEO36266.1| succinoglycan biosynthesis regulator [Fusobacterium mortiferum ATCC
           9817]
          Length = 232

 Score =  145 bits (364), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 67/228 (29%), Positives = 100/228 (43%), Gaps = 18/228 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKI-VELMPK 66
             L+L SGG DSSTCL+ A+DR+  D V  LS  YGQ++  ELE    +     +EL+  
Sbjct: 2   RVLVLLSGGVDSSTCLAMAVDRYGKDNVVALSASYGQKHTKELESARKIASYYQIELIEI 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +       L    D      + +  ++  D    +T+VP RN +FL  AA++A   
Sbjct: 62  NLGKIFSFSNCSLLSHSDKEIPQGSYDEQLRNIDGEKLSTYVPFRNGLFLSTAASIALSK 121

Query: 127 GITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
               I  G    D +G  YPDC  +   A+  AI LG    + +  P + + K +  K  
Sbjct: 122 NCQVIYYGAHSDDSAGDAYPDCSPEFNEAMNRAIYLGSGKELKIEAPFVNMHKSDIVKKG 181

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
            ++      NL  E + +CY G         Y C  C  C  R+K + 
Sbjct: 182 LEL------NLPYELTWSCYEGGE-------YPCGKCGTCIDREKAFE 216


>gi|171914503|ref|ZP_02929973.1| exsB protein [Verrucomicrobium spinosum DSM 4136]
          Length = 226

 Score =  145 bits (364), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 57/239 (23%), Positives = 94/239 (39%), Gaps = 30/239 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+L SGG DS T L WA    +    +SFDYG ++           K+I       + 
Sbjct: 2   KTLVLLSGGMDSVTALYWAARETEVAGCVSFDYGSKHN---------AKEIPMAAWHAQQ 52

Query: 70  SLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 ++ L  +  +  S L K+         ++ ++  T VP RN I L  A  LA  
Sbjct: 53  LGVRHDVIRLDFMDQLFASDLLKSGGDIPDGHYEEQSMKRTVVPFRNGIMLAIACGLAES 112

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                +VI     D++ YPDCR   ++++ +A+  G  + V +  P +   K    KL  
Sbjct: 113 QEAGGVVIAAHSGDHAIYPDCREPFMQSMASAMMCGTYAQVELLRPFIAQDKAGIAKLGT 172

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQD 240
             G      +    + +CY G           C +C  C  R++ + +       +Y D
Sbjct: 173 AYG------VDFSHTWSCYKGGD-------IHCGTCGTCVERREAFQDAGVPDPTQYLD 218


>gi|163783753|ref|ZP_02178739.1| trans-regulatory protein ExsB [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880999|gb|EDP74517.1| trans-regulatory protein ExsB [Hydrogenivirga sp. 128-5-R1-1]
          Length = 215

 Score =  145 bits (364), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 98/229 (42%), Gaps = 23/229 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS+T L  A   FD+V  +SFDYGQR++VEL+    + +     + + +
Sbjct: 2   KKAIVLLSGGMDSATLLWLAKREFDKVWAISFDYGQRHQVELKYAKGLAE-----LAEVE 56

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           + +     +  +I G        +  +    +N  P T VP RN+ FL  A+  A  L I
Sbjct: 57  EHIIVKLPIYESIKGSALIDESVEVPSEDYPENEPPITTVPMRNLNFLSIASAFADALEI 116

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIE-----TAINLGMESHVTVHTPLMWLKKYETWKL 183
            +I IGV   D             A       + +    +  + V  P + + K E   L
Sbjct: 117 DHIGIGVHALDTPYPDCRPEFITSAESAINAGSILTAKKKVRIHVWAPFLGMSKREIALL 176

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
            +++G      +  E++++CY G           C  CP C  R++   
Sbjct: 177 GKELG------VPYEKTYSCYRGTEPP-------CGECPTCRQREEALQ 212


>gi|157964844|ref|YP_001499668.1| trans-regulatory protein ExsB [Rickettsia massiliae MTU5]
 gi|157844620|gb|ABV85121.1| Trans-regulatory protein ExsB [Rickettsia massiliae MTU5]
          Length = 238

 Score =  145 bits (364), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 65/253 (25%), Positives = 105/253 (41%), Gaps = 33/253 (13%)

Query: 1   MNDII----KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
           M+ I          A++L SGG DS+T L         +  LSF+Y +RN  E++    +
Sbjct: 1   MSKINFSGKTMKKKAVILLSGGPDSTTVLEIVSKMDYEIYALSFNYHRRNSPEVQKIQGL 60

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT----FVPGRN 112
            K       +  +       + L      + +    +V      + LP+     +VP RN
Sbjct: 61  IKDYNVKQHRVIN-------IDLQSFIGSALTDDNIDVPKFKHTDQLPSDIPVTYVPARN 113

Query: 113 IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVT 167
            IFL +A  +A  +G  +I IGV   DY+ YPDCR + I++ E   NL          +T
Sbjct: 114 TIFLSYALGVAEVIGARDIFIGVHTNDYTNYPDCRPEYIKSFEAMANLATRVGVNGEKIT 173

Query: 168 VHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLR 227
           +H PL+ + K +  K   ++G      +   ++ +CY          G  C  C +C  R
Sbjct: 174 IHAPLINMTKEQIIKKGLELG------VDYSKTISCYDPTEA-----GLSCGQCLSCIAR 222

Query: 228 QKGWMEFKEKYQD 240
              +   K   QD
Sbjct: 223 LDAFK--KNNVQD 233


>gi|124486431|ref|YP_001031047.1| hypothetical protein Mlab_1618 [Methanocorpusculum labreanum Z]
 gi|189038924|sp|A2STX4|QUEC_METLZ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|124363972|gb|ABN07780.1| exsB protein [Methanocorpusculum labreanum Z]
          Length = 222

 Score =  145 bits (364), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 60/234 (25%), Positives = 92/234 (39%), Gaps = 29/234 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKW 67
             A+ L SGG DS+T    A      +  L  +YGQR  + ELE    V   +       
Sbjct: 2   KKAVCLLSGGMDSTTLAFVAKKMGYDILALHVNYGQRTERKELEAAKKVADVLG------ 55

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQD----NNLPNTFVPGRNIIFLVFAATLA 123
              + E   + L        SSLT              + PNT+VP RN   +  A +  
Sbjct: 56  ---VVEFLEISLDYFKKFGASSLTDMNIEVEAGVLGRADNPNTYVPFRNGNLISIATSYC 112

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH--TPLMWLKKYETW 181
                  I IGV   D++GYPDC    I A++ AI +G ++  ++   TP + + K +  
Sbjct: 113 ESRDGEAIFIGVQSGDHTGYPDCTPRFIEAMQHAIYVGTQTEKSIELLTPFVMMNKTDIL 172

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           K   ++       +  E + +CY        E    C  C +C  R K + +  
Sbjct: 173 KEGMELC------VPYEHTWSCY-------SENDEACGVCSSCLARLKAFADLG 213


>gi|258593845|emb|CBE70186.1| Queuosine biosynthesis protein queC [NC10 bacterium 'Dutch
           sediment']
          Length = 233

 Score =  145 bits (364), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 72/234 (30%), Positives = 110/234 (47%), Gaps = 27/234 (11%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++L SGG DS+T  + A  +  ++  L+F YGQR+  E+E    +   +        D  
Sbjct: 1   MVLLSGGIDSATAAALAKAKGYQLHALTFRYGQRHAREVESATRIAAALGASQHLILD-- 58

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDN---NLPNTFVPGRNIIFLVFAATLAYRLGI 128
                L L  +G  + ++       +  D     +P T+VP RN IFL +A   A  +G 
Sbjct: 59  -----LDLRRIGGSALTAEIPVPKGREMDEIGSGIPVTYVPARNTIFLSYALAWAEVIGS 113

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM------ESHVTVHTPLMWLKKYETWK 182
            +IV+GV   DYSGYPDCR + I A E   NL         S +T++TPL+ L K E  +
Sbjct: 114 EDIVLGVNAIDYSGYPDCRPEYIAAFERMANLATRAGAEGRSTLTIYTPLIHLSKAEIIR 173

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
               +G      +    + +CY   +D     G  C +C +C LR+KG+ E   
Sbjct: 174 RGAALG------IDFRLTWSCYDPTQD-----GRPCRACDSCILREKGFAEAGI 216


>gi|218709345|ref|YP_002416966.1| putative ATPase [Vibrio splendidus LGP32]
 gi|218322364|emb|CAV18511.1| predicted ATPase [Vibrio splendidus LGP32]
          Length = 197

 Score =  145 bits (364), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 83/199 (41%), Positives = 123/199 (61%), Gaps = 9/199 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  +D V  ++FDYGQR+++E+E    + K++     K  
Sbjct: 2   KKAVVVFSGGQDSTTCLVQALKEYDEVHAITFDYGQRHRLEIEVAESLSKELGVKAHKVM 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D      +  L  L   S +     V+ ++Q+N LPN+FVPGRNI+FL  A   AY++G 
Sbjct: 62  D------VTLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIGA 115

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++ GVCETD+SGYPDCR+D ++A+ +A+  GM+  + + TPLMWL K ETW LA    
Sbjct: 116 NTVITGVCETDFSGYPDCRNDFVKAMNSALVQGMDKPLDIKTPLMWLNKAETWALADQ-- 173

Query: 189 GQDLVNLILEESHTCYLGK 207
               + L+  ++ TCY G 
Sbjct: 174 -YSALELVRNKTLTCYNGI 191


>gi|189039052|sp|A8F2I5|QUEC_RICM5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
          Length = 228

 Score =  144 bits (363), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 63/243 (25%), Positives = 102/243 (41%), Gaps = 29/243 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T L         +  LSF+Y +RN  E++    + K       +
Sbjct: 1   MKKKAVILLSGGPDSTTVLEIVSKMDYEIYALSFNYHRRNSPEVQKIQGLIKDYNVKQHR 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT----FVPGRNIIFLVFAATL 122
             +       + L      + +    +V      + LP+     +VP RN IFL +A  +
Sbjct: 61  VIN-------IDLQSFIGSALTDDNIDVPKFKHTDQLPSDIPVTYVPARNTIFLSYALGV 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKK 177
           A  +G  +I IGV   DY+ YPDCR + I++ E   NL          +T+H PL+ + K
Sbjct: 114 AEVIGARDIFIGVHTNDYTNYPDCRPEYIKSFEAMANLATRVGVNGEKITIHAPLINMTK 173

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            +  K   ++G      +   ++ +CY          G  C  C +C  R   +   K  
Sbjct: 174 EQIIKKGLELG------VDYSKTISCYDPTEA-----GLSCGQCLSCIARLDAFK--KNN 220

Query: 238 YQD 240
            QD
Sbjct: 221 VQD 223


>gi|187736368|ref|YP_001878480.1| exsB protein [Akkermansia muciniphila ATCC BAA-835]
 gi|187426420|gb|ACD05699.1| exsB protein [Akkermansia muciniphila ATCC BAA-835]
          Length = 223

 Score =  144 bits (363), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 63/233 (27%), Positives = 92/233 (39%), Gaps = 21/233 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVEL 63
           + K  +A+ L SGG DSS  L WA         LSFDY   + + EL+C       +   
Sbjct: 1   MDKMETAV-LLSGGLDSSVALHWAHRNHRVRVALSFDYASNHAERELKCAAWQAASLGIE 59

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                 S    H      L     S           +  +  T VP RN IFL  AA +A
Sbjct: 60  HRVIDISSISSH------LKSALLSGADDIPDGSYDEELMKQTVVPFRNGIFLSIAAGVA 113

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              G   +VI     D+S YPDCR + + A+  AI LG  + + +  P + + K     +
Sbjct: 114 ESCGAQQLVIAAHSGDHSIYPDCREEFMAAMTEAIRLGTYAGLGILRPFIHMSKGGIAAM 173

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            QD+G      +    +++CY G           C  C  C  R++ + E   
Sbjct: 174 GQDLG------VDFSRTYSCYKGG-------AVHCGVCSTCMERREAFREAGI 213


>gi|229587053|ref|YP_002845554.1| Trans-regulatory protein ExsB [Rickettsia africae ESF-5]
 gi|259551568|sp|C3PLH1|QUEC_RICAE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|228022103|gb|ACP53811.1| Trans-regulatory protein ExsB [Rickettsia africae ESF-5]
          Length = 228

 Score =  144 bits (363), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 29/243 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T L         +  LSF+Y +RN +E++    + K       +
Sbjct: 1   MKKKAVILLSGGPDSTTVLEIVSKTDYEIYALSFNYHRRNSLEVQKIQGLIKDYNVKQHR 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT----FVPGRNIIFLVFAATL 122
             +       + L      + +    +V      + LP+     +VP RN IFL +A  +
Sbjct: 61  VIN-------IDLQSFIGSALTDDNIDVPKFKNTDQLPSDIPVTYVPARNTIFLSYALGV 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKK 177
           A  +G  +I IGV   DY+ YPDCR + I++ E   NL          +T+H PL+ + K
Sbjct: 114 AEVIGARDIFIGVHTNDYTNYPDCRPEYIKSFEAMANLATRVGVNGEKITIHAPLINMTK 173

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            +  K   ++G      +   ++ +CY    D     G  C  C +C  R   +   +  
Sbjct: 174 EQIIKKGLELG------VDYSKTISCYDPTED-----GLSCGQCLSCIARLDAFK--RNN 220

Query: 238 YQD 240
            QD
Sbjct: 221 VQD 223


>gi|78777268|ref|YP_393583.1| ExsB [Sulfurimonas denitrificans DSM 1251]
 gi|110816276|sp|Q30RN3|QUEC_SULDN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|78497808|gb|ABB44348.1| ExsB [Sulfurimonas denitrificans DSM 1251]
          Length = 224

 Score =  144 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 28/240 (11%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVE 62
           +  K   A+ + SGG DS+       +    +  L F+Y QR +  EL C   + + +  
Sbjct: 1   MNLKNKKAICIMSGGMDSTLGAYMVKEMGYEIVALHFNYAQRTEAKELFCFKKICEAL-- 58

Query: 63  LMPKWKDSLGEDHILPLAIL---GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                  ++   ++L L      G  + +  + ++ +   +  +P T+VP RN IFL  A
Sbjct: 59  -------NVSNSYVLDLDFFSKIGASALTDKSIDIPINGLEEGVPITYVPFRNGIFLSIA 111

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKK 177
           A LA +     I IGV + D SGYPDC+   I ++E +INLG +    + ++ PL+ L K
Sbjct: 112 AALAEKEEAVLIAIGVVQEDSSGYPDCKDSFITSMEQSINLGTKDETKIKIYMPLVHLSK 171

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            +  + A  +      N+ LE + +CY  +          C  C +C LR  G+     K
Sbjct: 172 SQIVEHALRL------NVPLELTWSCYKDEEA-------ACGVCDSCRLRLNGFRLANAK 218


>gi|15679119|ref|NP_276236.1| hypothetical protein MTH1108 [Methanothermobacter
           thermautotrophicus str. Delta H]
 gi|41018374|sp|O27180|QUEC_METTH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|2622210|gb|AAB85597.1| conserved protein [Methanothermobacter thermautotrophicus str.
           Delta H]
 gi|3023053|gb|AAC12720.1| ORF2R [Methanothermobacter thermautotrophicus]
          Length = 222

 Score =  144 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 53/245 (21%), Positives = 98/245 (40%), Gaps = 38/245 (15%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKWK 68
            A+ + SGG DS+   +  +D    +  ++FDYGQR  ++ELE    + + +        
Sbjct: 2   RAISILSGGMDSAVATALMMDE-YEIHAITFDYGQRSARMELEYARRLSEHLG------- 53

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQD---------NNLPNTFVPGRNIIFLVFA 119
               E   L L  LG +  S LT    +                   +VPGRN++F    
Sbjct: 54  ---IEHTTLDLQWLGRLGGSVLTAGGDIPSPSNLDDTVECLETARKVWVPGRNLVFTSIG 110

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            + A  +    +++G    +   +PD   + + A    + +G    V V  P++ + K E
Sbjct: 111 VSFAEAMDAGAVIVGWDLEEAETFPDNSEEFLDAFNRLLEIGTLDGVRVVAPVIGMTKRE 170

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK---- 235
             +   ++G      L  E +++CY G R         C  C +C  R++ +        
Sbjct: 171 IVEAGHEVG------LPFELTYSCYAGDR-------VHCGVCESCMRRRRAFELAGIDDP 217

Query: 236 EKYQD 240
            +Y++
Sbjct: 218 TEYRE 222


>gi|325678487|ref|ZP_08158102.1| protein ExsB [Ruminococcus albus 8]
 gi|324109798|gb|EGC03999.1| protein ExsB [Ruminococcus albus 8]
          Length = 228

 Score =  144 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 70/233 (30%), Positives = 97/233 (41%), Gaps = 22/233 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            AL+LFSGG DSSTCL  A+D++  D V  LS  YGQ++  E+     V           
Sbjct: 2   KALVLFSGGLDSSTCLGLAVDKYGADNVLALSVYYGQKHDKEIRASEKVAAHYGVKQQTL 61

Query: 68  ---KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              K   G D  L     GDI   S  K +          +T+VP RN +FL  AA++A 
Sbjct: 62  DLAKIFEGSDCTLLKGSDGDIPKESYAKQIEE--SAGKPVSTYVPFRNGLFLASAASIAL 119

Query: 125 RLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
             G   I  G    D +G  YPDC  +  RA+  AI LG    + +  P + L K +  +
Sbjct: 120 SNGCDVIYYGAHSDDAAGNAYPDCSENFNRAMNEAIYLGSGEQLRIEAPFVSLTKADVVR 179

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
              ++G      +  E + +CY G           C  C  C  R   +    
Sbjct: 180 KGVELG------VPFELTWSCYEGGDKP-------CGICGTCRDRIAAFEANG 219


>gi|124516512|gb|EAY58020.1| ExsB protein [Leptospirillum rubarum]
 gi|206603411|gb|EDZ39891.1| ExsB protein [Leptospirillum sp. Group II '5-way CG']
          Length = 241

 Score =  144 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 66/236 (27%), Positives = 97/236 (41%), Gaps = 29/236 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR-LCVRKKIVELMPKW 67
             +++L SGG DS+   + A+    RV  L   YG R +   E     + +         
Sbjct: 17  KGSVVLVSGGMDSAVTAAMAIRESPRVAFLHVRYGARAQDSEERAFRNIARHWG------ 70

Query: 68  KDSLGEDHILPLAILGDISHSSLT----KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              +    ++ LA LG +  S+LT    +  A       +P+T+VP RN  FL  A +  
Sbjct: 71  ---VDRVQVIDLAPLGALGGSALTDRSMEVPAANPDAPGIPSTYVPFRNAHFLAIATSWC 127

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETW 181
             L    I IG  E D SGYPDCR     A E AI LG      + + TP++ L K E  
Sbjct: 128 EVLKFDRIWIGAVEEDSSGYPDCRRIFYDAFEEAIRLGTRPGTGIRIMTPVIHLNKGEIV 187

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                +G      +  E + +CY        E    C  C +C LR +G+     +
Sbjct: 188 SEGVRLG------VPFEHTWSCYR-------EGTRACGRCDSCALRLRGFSRAGIR 230


>gi|317181953|dbj|BAJ59737.1| ExsB trans-regulatory protein [Helicobacter pylori F57]
          Length = 226

 Score =  144 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 89/222 (40%), Positives = 136/222 (61%), Gaps = 8/222 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           + FSGGQDS+T   WA  RF +V  + FDY Q++ VELEC   +   +     +    + 
Sbjct: 8   ISFSGGQDSTTLAVWAKKRFKKVCLVGFDYAQKHSVELECAQKIASLL-----QLPYEII 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
               L       +  +S         Q+ +LPN+FVP RN IF+    + A ++G +NI 
Sbjct: 63  PLDFLENITHSALFKNSNDLMGHSHAQNKDLPNSFVPNRNAIFITLLHSYAQKIGASNIA 122

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
           +GV + D+SGYPDC+ D I++IE A+NLG  + + + TPLM+L K + +++A+D+G    
Sbjct: 123 LGVSQADFSGYPDCKEDFIKSIEHALNLGSSTAIKILTPLMFLNKAQEFQMAKDLGA--- 179

Query: 193 VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           ++LI++E+HTCY G+R   + +GYGCN CPAC LR+KG+ EF
Sbjct: 180 LDLIIKETHTCYQGERKILHAYGYGCNECPACQLRKKGYEEF 221


>gi|322434471|ref|YP_004216683.1| exsB protein [Acidobacterium sp. MP5ACTX9]
 gi|321162198|gb|ADW67903.1| exsB protein [Acidobacterium sp. MP5ACTX9]
          Length = 231

 Score =  144 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 93/231 (40%), Gaps = 18/231 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+L  SGG DS  C + A  R   +  + F YGQR +           K+V        
Sbjct: 3   KAVLCLSGGMDSCVCAALA-ARDHELYAVHFSYGQRTEARELRSAEAIAKLVGAKDFLHL 61

Query: 70  SLGEDHIL---PLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +     +    L         ++ +        + +P T+VP RN  FL  A + A  L
Sbjct: 62  KIELFRRIGGSALTDRSIAVPDAVAEEAMHGRTGDEVPVTYVPFRNAHFLSAAVSWAEVL 121

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-HVTVHTPLMWLKKYETWKLAQ 185
           G   + IG  E D SGYPDCR     A    I  G +   + V TPL+ ++K E  +L  
Sbjct: 122 GAKVVTIGAVEQDSSGYPDCRPAYYDAFNELIRQGTKEGEIRVETPLIRMRKNEIVRLGV 181

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           ++G        L  S +CY G+ +        C  C +C LR + + E   
Sbjct: 182 ELGA------PLHVSWSCYSGEDE-------ACGVCESCALRLRAFREAGA 219


>gi|134046496|ref|YP_001097981.1| exsB protein [Methanococcus maripaludis C5]
 gi|167016435|sp|A4FZY3|QUEC_METM5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|132664121|gb|ABO35767.1| exsB protein [Methanococcus maripaludis C5]
          Length = 233

 Score =  144 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 48/234 (20%), Positives = 93/234 (39%), Gaps = 10/234 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWK 68
            A+ + SGG DS+     A      + T++F+YGQ     E++    + + +        
Sbjct: 2   KAICVLSGGLDSAVTSLVAKSENYDITTVTFNYGQMALNQEIKSAEKISEILNADHHVID 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  ++        G+I           +  +  +   +VP RN+I    A+  A  +  
Sbjct: 62  INFVKEFSKSGLNTGNIPEPEKEDLDDFEKSEKTMKAVWVPARNMIMFSIASGFAEGIDA 121

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I  G+   +   +PD   + I     ++  G  + V +  PL  L K E  KL +++ 
Sbjct: 122 EKIFSGLNREEGVTFPDNTPEFIERFNKSLEYGTLNKVKMVAPLYELNKPEIAKLGKELE 181

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKY 238
            +  + +I + S++CY        E    C +C +C  R++ + E       KY
Sbjct: 182 LKLDLEVI-KYSYSCYR----DNGEDYLHCGTCESCMRRKRAFKEAGIVDPTKY 230


>gi|325851988|ref|ZP_08171071.1| protein ExsB [Prevotella denticola CRIS 18C-A]
 gi|325484544|gb|EGC87460.1| protein ExsB [Prevotella denticola CRIS 18C-A]
          Length = 218

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 55/233 (23%), Positives = 93/233 (39%), Gaps = 28/233 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             ++++ SGG DS T L    +       +SFDYGQ +           K++       +
Sbjct: 2   KDSVIIVSGGLDSITLLYDKAET--IALAVSFDYGQNHG---------AKELPFAAHHCR 50

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                   +PL+ +     SSL             + N+ +T VP RN I L  A  +A 
Sbjct: 51  KLGIPHITIPLSFMHRYFKSSLLDGAEAIPEGHYAEENMKSTVVPFRNGIMLAIATGIAE 110

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G+  + I     D++ YPDCR D I+A++ A   G   +V +  P   + K +  +  
Sbjct: 111 SHGLKRVYIANHGGDHTIYPDCRPDFIQAMDGAATAGTFINVRIEAPYTNITKADIVRRG 170

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
             +G      +   ++ +CY G           C  C  C  R++ ++E   K
Sbjct: 171 TALG------VDYSKTWSCYKGSD-------VHCGKCGTCVERKEAFLEAGVK 210


>gi|328885754|emb|CCA58993.1| Queuosine Biosynthesis QueC ATPase [Streptomyces venezuelae ATCC
           10712]
          Length = 236

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 61/234 (26%), Positives = 95/234 (40%), Gaps = 32/234 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           A+L+FSGG DS+      LD    V  LSF+YGQR+  EL     +  ++          
Sbjct: 10  AVLIFSGGLDSAVTAYKLLDAGVTVSLLSFNYGQRHVKELAQAATLADQLG--------- 60

Query: 71  LGEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                I+ L  L  I   S   + A+       +   + +T VP RN I L  AA  A  
Sbjct: 61  -VSHDIVDLTSLNRILGGSALTDPAIEVPHGHYRAETMRSTVVPNRNAIMLEIAAGAAVA 119

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV----TVHTPLMWLKKYETW 181
            G   +  G    D++ YPDCR +    IE A+  G E H+     +  P + L K +  
Sbjct: 120 AGADAVAFGAHSGDHAIYPDCRPEFFTLIEAAMKAGNEGHIVADFQLVAPFLQLTKADIV 179

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           +    +      ++  + + +CY G           C +C  C  R++ + E  
Sbjct: 180 REGARL------DVPFKLTWSCYEGGE-------LHCGACGTCVERREAFDEAG 220


>gi|225851495|ref|YP_002731729.1| ExsB protein [Persephonella marina EX-H1]
 gi|254764364|sp|C0QST3|QUEC_PERMH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|225645380|gb|ACO03566.1| ExsB protein [Persephonella marina EX-H1]
          Length = 227

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 99/236 (41%), Gaps = 24/236 (10%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +K++ S ++L SGG DS+  L  A   FD+V  +SFDYGQ+++VEL+    + ++     
Sbjct: 1   MKQSSSIIILVSGGMDSAALLWLAKKEFDKVYAVSFDYGQKHRVELDFAKKLTEEAGVEE 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
               +      +  L  +   + +  +  +  +      P T VP RN+ FL  AA+ A 
Sbjct: 61  HFIAE------VPHLKGIKGSALTDRSVEIPSEEYPEGPPVTTVPMRNLNFLSIAASFAD 114

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYE 179
              I NI IGV   D             A        +      + +TV+TP + + K +
Sbjct: 115 IYEIENIGIGVHSVDSPYPDCRAEFVSAAEAAINASSVMVAKKKNRITVYTPFLGMTKTD 174

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
             ++  ++G      +  E++++CY G           C  C  C  R + +    
Sbjct: 175 VLRIGLELG------VPYEKTYSCYRGTIPP-------CGECATCRQRIEAFRSVG 217


>gi|291279332|ref|YP_003496167.1| ExsB family transcriptional regulator [Deferribacter desulfuricans
           SSM1]
 gi|290754034|dbj|BAI80411.1| transcriptional regulator, ExsB family [Deferribacter desulfuricans
           SSM1]
          Length = 237

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 64/234 (27%), Positives = 97/234 (41%), Gaps = 29/234 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DS    + A D    +  L  +YGQR +          +++         
Sbjct: 3   KAIVLVSGGMDSCVTAAIAKDMGYELYLLHTNYGQRTEN---------RELKAFYDIASY 53

Query: 70  SLGED-HILPLAILGDISHSSLTKNVAMKIQDN----NLPNTFVPGRNIIFLVFAATLAY 124
              +D  ++ +  L  I  S+LT       + N     +P T+VP RN   L  A + A 
Sbjct: 54  YDAKDTLVVSIDYLKKIGGSALTDEKIEVEKGNLNRKEIPKTYVPFRNANILSIATSWAE 113

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYETWK 182
            +    I IG  E D SGYPDCR          +++ +   +   V TPL+ +KK +  K
Sbjct: 114 VIEAERIFIGAVEEDSSGYPDCRKIFYDKFNDLLSVALAKDIGLKVETPLINMKKKDIVK 173

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
              ++      N  L  S +CY  +          C  C +C LR KG+ME  E
Sbjct: 174 KGVEL------NAPLHLSWSCYKSEDK-------ACGECDSCLLRLKGFMEAGE 214


>gi|257452359|ref|ZP_05617658.1| queuosine biosynthesis protein QueC [Fusobacterium sp. 3_1_5R]
 gi|257465849|ref|ZP_05630160.1| queuosine biosynthesis protein QueC [Fusobacterium gonidiaformans
           ATCC 25563]
 gi|315917006|ref|ZP_07913246.1| archaeosine biosynthesis protein queC [Fusobacterium gonidiaformans
           ATCC 25563]
 gi|317058902|ref|ZP_07923387.1| archaeosine biosynthesis protein queC [Fusobacterium sp. 3_1_5R]
 gi|313684578|gb|EFS21413.1| archaeosine biosynthesis protein queC [Fusobacterium sp. 3_1_5R]
 gi|313690881|gb|EFS27716.1| archaeosine biosynthesis protein queC [Fusobacterium gonidiaformans
           ATCC 25563]
          Length = 231

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 67/232 (28%), Positives = 101/232 (43%), Gaps = 18/232 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKI-VELMPK 66
             L+L SGG DS+TCL+ A+D++  D+V  LS  YGQ++  E+     + K   VEL+  
Sbjct: 2   KVLVLLSGGLDSTTCLAIAVDKYGADQVVALSASYGQKHTKEILSARAIAKYYQVELLEL 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +       L           +    +  Q+  + +T+VP RN +FL  AA++A   
Sbjct: 62  NLSKIFSYSNCSLLSHSTEEVPHHSYAEQLNQQEEEILSTYVPFRNGLFLSTAASIALSK 121

Query: 127 GITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             + I+ G    D +G  YPDC      A+ TAI  G    V V  P + L K +  KL 
Sbjct: 122 ECSIILYGAHSDDAAGNAYPDCSPAFNEAMNTAIYEGSGRQVKVEAPFIGLHKKDIVKLG 181

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
                   + +  E + +CY GK          C  C  C  R+K + E   
Sbjct: 182 ------LTLQVPYELTWSCYEGKEHS-------CGECGTCIDREKAFEENGT 220


>gi|325291197|ref|YP_004267378.1| exsB protein [Syntrophobotulus glycolicus DSM 8271]
 gi|324966598|gb|ADY57377.1| exsB protein [Syntrophobotulus glycolicus DSM 8271]
          Length = 231

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 62/233 (26%), Positives = 96/233 (41%), Gaps = 18/233 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           ++K   A++L SGG DS+ C   A   F  + V  L+  YGQ++  E++    V + +  
Sbjct: 1   MEKKRKAVVLLSGGLDSTICAVLACREFGAENVIALTLFYGQKHAREIKSAEAVCEHLG- 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +   + +SL +      + L D    +         Q   +  T+VP RN  FL  A T+
Sbjct: 60  IPEHYTESLPDIFRGAGSTLVDPDKPNPEMTYEELSQAYGISPTYVPFRNANFLSVATTV 119

Query: 123 AYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           A       I  G    D     YPDC  +   ++ +AI +G    V + TPL WL K + 
Sbjct: 120 ALVKEADTIFYGAHAEDARNWAYPDCTPEFNGSMASAIYIGSYLKVRLVTPLQWLTKKDI 179

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
             L         VN   E + +CY G+          C  C  C  R + + E
Sbjct: 180 VALGI------TVNAPFELTWSCYNGQEK-------ACGVCSTCVGRLQAFQE 219


>gi|37522606|ref|NP_925983.1| hypothetical protein gll3037 [Gloeobacter violaceus PCC 7421]
 gi|81707945|sp|Q7NCE2|QUEC_GLOVI RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|35213607|dbj|BAC90978.1| gll3037 [Gloeobacter violaceus PCC 7421]
          Length = 234

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 85/230 (36%), Positives = 120/230 (52%), Gaps = 15/230 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             AL++FSGGQDS+TC + A   +D V  ++F+Y QR+ +ELE    V + +  L     
Sbjct: 2   KKALVVFSGGQDSTTCAALACREYDEVHAVTFEYNQRHAIELESARAVGQALG-LTGHEF 60

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             LG        ++ D           +      +  TFVPGRNI+FL  AA  A+ LG 
Sbjct: 61  IRLGPLLKGTSPLVSDAPLGQYASAAELPA---GVEPTFVPGRNILFLTLAANRAFCLGT 117

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME---SHVTVHTPLMWLKKYETWKLAQ 185
            +IVIGVCE D++GY DCR   + A+  A+  G+    + + +HTPLM L K ET KL+ 
Sbjct: 118 GDIVIGVCEADFAGYWDCRQVFVEAMARALGEGIYGDANAIRIHTPLMRLTKAETVKLSV 177

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           ++   +    +L  SHTCY G R        GC  C AC LR +G+ E  
Sbjct: 178 EV-LGERFEEVLALSHTCYAGVRG-------GCGRCHACILRDRGFREAG 219


>gi|238651010|ref|YP_002916866.1| trans-regulatory protein ExsB [Rickettsia peacockii str. Rustic]
 gi|259551571|sp|C4K2L7|QUEC_RICPU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|238625108|gb|ACR47814.1| trans-regulatory protein ExsB [Rickettsia peacockii str. Rustic]
          Length = 228

 Score =  143 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 29/243 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++L SGG DS+T L         +  LSF+Y +RN +E++    + K       +
Sbjct: 1   MKKKAVILLSGGPDSTTVLEIVSKTDYEIYALSFNYHRRNSLEVQKIQGLIKDYNVKQHR 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT----FVPGRNIIFLVFAATL 122
             +       + L      + +    +V      + LP+     +VP RN IFL +A  +
Sbjct: 61  VIN-------IDLQSFIGSALTDDNIDVPKFKNTDQLPSDIPVTYVPARNTIFLSYALGV 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKK 177
              +G  +I IGV   DY+ YPDCR + I++ E   NL          +T+H PL+ + K
Sbjct: 114 VEVIGARDIFIGVHTNDYTNYPDCRPEYIKSFEAMANLATRVGVNGEKITIHAPLINMTK 173

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            +  K   ++G      +   ++ +CY    D     G  C  C +C  R   +   K  
Sbjct: 174 EQIIKKGLELG------VDYSKTISCYDPTED-----GLSCGQCLSCIARLDAFK--KNN 220

Query: 238 YQD 240
            QD
Sbjct: 221 VQD 223


>gi|325958150|ref|YP_004289616.1| exsB protein [Methanobacterium sp. AL-21]
 gi|325329582|gb|ADZ08644.1| exsB protein [Methanobacterium sp. AL-21]
          Length = 228

 Score =  143 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 54/248 (21%), Positives = 106/248 (42%), Gaps = 40/248 (16%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMP 65
               A+ + SGG DS+   +       ++  L+F+YGQ+  ++E++    V K++     
Sbjct: 1   MKKKAITVLSGGLDSTVASAKF-REDYQIHALTFNYGQKSAEMEIKSAKAVCKELGA--- 56

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL-----------PNTFVPGRNII 114
                  E  ++ L  L ++ +S+LT   ++   +++             + +VPGRN++
Sbjct: 57  -------EHTVIELPWLAELGNSALTSEESIPEPEDSELDDIESALKTAKSVWVPGRNVV 109

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
           F   A + A     + I++G    +   +PD   + + A  T + +G    + +  PL+ 
Sbjct: 110 FTAIANSFAEAENASIIIVGWDLEEAVTFPDNSKEFLEAFNTVLEVGSFDVIKIEAPLIG 169

Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM-- 232
           + K E  +    IG        +E S++CY G         Y C  C +C  R++ +   
Sbjct: 170 MNKNEIVEYGDSIGA------PMELSYSCYKG-------LNYHCGVCESCMRRKRAFKNT 216

Query: 233 --EFKEKY 238
             E K  Y
Sbjct: 217 GVEDKTVY 224


>gi|206603341|gb|EDZ39821.1| ExsB protein [Leptospirillum sp. Group II '5-way CG']
          Length = 241

 Score =  143 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 65/236 (27%), Positives = 97/236 (41%), Gaps = 29/236 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR-LCVRKKIVELMPKW 67
             +++L SGG DS+   + A+    R+  L   YG R +   E     + +         
Sbjct: 17  KGSVVLVSGGMDSAVTAAMAIRESPRIAFLHVRYGARAQDSEERAFRNIARHWG------ 70

Query: 68  KDSLGEDHILPLAILGDISHSSLT----KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              +    ++ LA LG +  S+LT    +  A       +P+T+VP RN  FL  A +  
Sbjct: 71  ---VDRVQVVDLAPLGVLGGSALTDRSMEVPAANPDAPGIPSTYVPFRNAHFLAIATSWC 127

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETW 181
             L    I IG  E D SGYPDCR     A E AI LG      + + TP++ L K E  
Sbjct: 128 EVLKFDRIWIGAVEEDSSGYPDCRRIFYDAFEEAIRLGTRPGTGIRIMTPVIHLNKGEIV 187

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                +G      +  E + +CY        E    C  C +C LR +G+     +
Sbjct: 188 SEGIRLG------VPFEHTWSCYR-------EGTRACGRCDSCALRLRGFSRAGIR 230


>gi|78780169|ref|YP_398281.1| ExsB [Prochlorococcus marinus str. MIT 9312]
 gi|110816241|sp|Q317V0|QUEC_PROM9 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|78713668|gb|ABB50845.1| preQ(0) biosynthesis protein QueC [Prochlorococcus marinus str. MIT
           9312]
          Length = 224

 Score =  143 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 76/234 (32%), Positives = 112/234 (47%), Gaps = 26/234 (11%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  K  S ++L SGG DSST  S A     ++  LSFDYGQR+K EL     + K     
Sbjct: 1   MTLKNKSIVVLLSGGLDSSTVTSIAKKSEAKIFGLSFDYGQRHKKELHSASTIAKHFDIQ 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATL 122
             K          L L++ G  S +   KN+    +Q N +PNT+VPGRN IF+  A + 
Sbjct: 61  EFKI-------IKLDLSLWGGSSLTDTKKNIPTEGVQTNKIPNTYVPGRNTIFISVALSY 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-----ESHVTVHTPLMWLKK 177
           A  +    I +GV   DYSGYPDCR D I+  +   +L        + + + TPL+ L K
Sbjct: 114 AEAIDADFIGLGVNALDYSGYPDCRPDYIKKFQELADLANKRGRENNPIKLWTPLLDLNK 173

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
            +  +LA D       ++ L+++ +CY G           C  C +C +R   +
Sbjct: 174 EQIIQLAMD------NHVPLDKTWSCYSGDAKP-------CGKCDSCRIRNTAY 214


>gi|197303439|ref|ZP_03168478.1| hypothetical protein RUMLAC_02161 [Ruminococcus lactaris ATCC
           29176]
 gi|197297437|gb|EDY31998.1| hypothetical protein RUMLAC_02161 [Ruminococcus lactaris ATCC
           29176]
          Length = 227

 Score =  143 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 61/236 (25%), Positives = 95/236 (40%), Gaps = 27/236 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            AL+L SGG DS+T L+ A+ R+  D V  LS  YGQ++  E++      K +       
Sbjct: 2   KALVLSSGGVDSTTALALAVSRYGKDNVIALSVSYGQKHDKEIQAA----KAVSAFYGVE 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMK------IQDNNLPNTFVPGRNIIFLVFAAT 121
           +  L    I   +    +  S+               +     +T+VP RN +FL  AA+
Sbjct: 58  QLFLDLSKIFQYSNCSLLQQSTEEIPEESYAKQIEKTEGEKPVSTYVPFRNGLFLSSAAS 117

Query: 122 LAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           +A     + I+ G    D +G  YPDC      A+  AI  G    + V  P + + K E
Sbjct: 118 IALSKDCSVILYGAHADDSAGFAYPDCSPVFNDAMNQAIFEGSGHQLKVEAPFVNMTKAE 177

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
             K+  ++      N   E + +CY GK +        C  C  C  R   +    
Sbjct: 178 VVKMGLEL------NAPYELTWSCYEGKDEP-------CGKCGTCIDRAAAFAANG 220


>gi|15606187|ref|NP_213564.1| trans-regulatory protein ExsB [Aquifex aeolicus VF5]
 gi|81343542|sp|O67003|QUEC_AQUAE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|2983380|gb|AAC06966.1| trans-regulatory protein ExsB [Aquifex aeolicus VF5]
          Length = 218

 Score =  143 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 61/237 (25%), Positives = 99/237 (41%), Gaps = 31/237 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +KK    ++L SGG DS+T L  A   F +V  +SFDYGQR+KVEL+    + K      
Sbjct: 1   MKKHDGIIVLLSGGMDSATLLWLAKREFKKVYAISFDYGQRHKVELKYAKELAK------ 54

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                 + +  I+ +     +  S+L          +  +N  P T VP RN+IFL  A+
Sbjct: 55  ---LAEVEDHFIVQVPFYTSLKGSALIDESVEVPKGEYPENEPPVTTVPMRNLIFLSIAS 111

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIE-----TAINLGMESHVTVHTPLMWL 175
             A  L +  I IGV   D             A       +      +  + V+ P + +
Sbjct: 112 AFADNLEVNYIGIGVHALDTPYPDCRPEFITAAEAAINAGSTFVAKKKERMHVYAPFLGM 171

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
            K +   L +++G      +  E++++CY+G           C  CP C  R++   
Sbjct: 172 SKRDIALLGKELG------VPFEKTYSCYMGTEPP-------CGECPTCIQREEALR 215


>gi|291519766|emb|CBK74987.1| preQ(0) biosynthesis protein QueC [Butyrivibrio fibrisolvens 16/4]
          Length = 228

 Score =  143 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 62/232 (26%), Positives = 93/232 (40%), Gaps = 26/232 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            AL+L SGG DS+TCL  A+  +  + V  LS  YGQR+  E++    V +         
Sbjct: 2   KALVLVSGGVDSTTCLGMAVKEYGSENVVGLSIFYGQRHDKEIKAADAVCEHYNVEHITL 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQ-----DNNLPNTFVPGRNIIFLVFAATL 122
             S     +   +    + HS          +     D    +T+VP RN +FL  A+ +
Sbjct: 62  DLST----MFQFSDCTLLQHSDGEIPEESYAEQLAKTDGKPVSTYVPFRNGLFLSSASAI 117

Query: 123 AYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           A   G + I  G    D +G  YPDC      A+ TAI  G    + +  P + L K + 
Sbjct: 118 ALSKGCSKIYYGAHSDDAAGNAYPDCSEAFNNAMNTAIYEGSGKQLQIEAPFINLTKAQV 177

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
            K   +IG      +  E + +CY G           C  C  C  R+  + 
Sbjct: 178 VKKGLEIG------VPYELTWSCYEGHEK-------ACGKCGTCIDRKAAFE 216


>gi|296109149|ref|YP_003616098.1| exsB protein [Methanocaldococcus infernus ME]
 gi|295433963|gb|ADG13134.1| exsB protein [Methanocaldococcus infernus ME]
          Length = 232

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 28/243 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+ + SGG DS+    +A      +  ++++YGQR        +   KKI E++     
Sbjct: 2   KAVSILSGGLDSTVATMYAKALGYDLLAITYNYGQRAAK---REIEAAKKISEILK---- 54

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMK----------IQDNNLPNTFVPGRNIIFLVFA 119
              E  ++ L  + +   S+L  N  +                +   +VP RN+IFL  A
Sbjct: 55  --IEHKVVELNFVKEFGKSALITNKEIPKLTFEDLDSEKAFETMRAVWVPARNVIFLAIA 112

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           +  A  +    I IG+ + +   +PD   + + A   A+  G  + V V  PL    K E
Sbjct: 113 SGFAEAIDGEKIFIGINKEEGVTFPDNTIEFVEAFNRALEYGTLNKVKVEAPLYDKTKEE 172

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW----MEFK 235
             KL +++  +  V + L+ S++CY        E    C  C +C  R++ +    +E +
Sbjct: 173 IVKLGKELEEKLGVKV-LKYSYSCYK----DNGESFLHCGECESCLRRKRAFKLANIEDE 227

Query: 236 EKY 238
            KY
Sbjct: 228 TKY 230


>gi|238018562|ref|ZP_04598988.1| hypothetical protein VEIDISOL_00389 [Veillonella dispar ATCC 17748]
 gi|237865033|gb|EEP66323.1| hypothetical protein VEIDISOL_00389 [Veillonella dispar ATCC 17748]
          Length = 234

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 61/240 (25%), Positives = 96/240 (40%), Gaps = 18/240 (7%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKI 60
           D++ +   A++LFSGG DS+TCL+ A++RF  D V  LS  YGQ++  ELE    +    
Sbjct: 4   DLMAQKQKAVVLFSGGVDSTTCLALAIERFGKDNVVPLSIQYGQKHSKELEAAASILAYY 63

Query: 61  VELMPKWKD-SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                      L       L      +    +     + +     +T+VP RN +FL  A
Sbjct: 64  GIEGKTMDVTKLFAFSNCSLLTQSTEAIPQGSYKEQQETEGEGTVSTYVPFRNGLFLSAA 123

Query: 120 ATLAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
           A+LA  L    I  G    D +G  YPDC     +++  AI  G     ++  P +   K
Sbjct: 124 ASLALSLDCGYIYYGAHSDDAAGNAYPDCTEHFYKSMGDAIFEGSGKECSLEAPFINHNK 183

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            +  K    +G      +    + +CY G           C  C  C  R + +     +
Sbjct: 184 ADVVKEGLRLG------VPYHLTWSCYEGGDKP-------CGHCGTCIDRAEAFRANGVE 230


>gi|257463608|ref|ZP_05627999.1| queuosine biosynthesis protein QueC [Fusobacterium sp. D12]
 gi|317061162|ref|ZP_07925647.1| succinoglycan biosynthesis regulator [Fusobacterium sp. D12]
 gi|313686838|gb|EFS23673.1| succinoglycan biosynthesis regulator [Fusobacterium sp. D12]
          Length = 231

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 65/231 (28%), Positives = 97/231 (41%), Gaps = 18/231 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIV-ELMPK 66
             L+L SGG DS+TCL+ A++++   +V  LS  YGQ++  EL+    +      EL+  
Sbjct: 2   KVLVLLSGGIDSTTCLAMAIEKYGVGQVVALSAFYGQKHNKELQAARNIANYYRVELIEL 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +       L           +    +  +     +T++P RN +FL  AA++A   
Sbjct: 62  NLSKIFAYSNSSLLKHSGKEIPHCSYVEQLAERKEKTLSTYIPFRNGLFLSTAASIAISK 121

Query: 127 GITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             + I  G    D +G  YPDC      A+ TAI  G    V V  P + L K E  KL 
Sbjct: 122 NCSIIFYGAHSDDAAGNAYPDCSPAFHEAMNTAIYEGSGRQVRVEAPFLKLHKKEIVKLG 181

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            D+       L  E + +CY G         Y C  C  C  R+K + E  
Sbjct: 182 LDL------KLPYELTWSCYEGGE-------YPCGQCGTCIDREKAFEENG 219


>gi|45357789|ref|NP_987346.1| ExsB family transcriptional regulator [Methanococcus maripaludis
           S2]
 gi|74555941|sp|Q6M0P3|QUEC_METMP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|45047349|emb|CAF29782.1| conserved hypothetical protein [Methanococcus maripaludis S2]
          Length = 233

 Score =  142 bits (358), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 48/234 (20%), Positives = 96/234 (41%), Gaps = 10/234 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWK 68
            A+ + SGG DS+    +A  +   + T++F+YGQ     E++    +   +        
Sbjct: 2   KAICVLSGGLDSAVTSMFAKSKNYDISTVTFNYGQMALNQEIKSAKKISDILNADHHVID 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  ++        G+I           +  +  +   +VP RN+I    A+  A  +G 
Sbjct: 62  INFVKEFSKSGLNTGNIPEPENEDLDDFEKSEKTMKAVWVPARNMIMFSIASGFAEGIGA 121

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I  G+ + +   +PD   + I     ++  G  + V +  PL  L K E  KL +++ 
Sbjct: 122 EKIFSGLNKEEGVTFPDNTPEFIERFNKSLEYGTLNKVKMVAPLYELNKPEIAKLGKELE 181

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKY 238
            +  + + L+ S++CY        +    C +C +C  R++ + E       KY
Sbjct: 182 LKLDLEV-LKYSYSCYK----DNGKDYLHCGTCESCMRRKRAFKEAGITDPTKY 230


>gi|332158265|ref|YP_004423544.1| hypothetical protein PNA2_0623 [Pyrococcus sp. NA2]
 gi|331033728|gb|AEC51540.1| hypothetical protein PNA2_0623 [Pyrococcus sp. NA2]
          Length = 239

 Score =  142 bits (358), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 63/229 (27%), Positives = 103/229 (44%), Gaps = 10/229 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKW 67
             A++LFSGG DS+ CL WA   +D V  L+ +YG R  +V          ++   +   
Sbjct: 2   KRAVVLFSGGLDSTACLYWAKRNYDEVIMLTINYGSREERVTNRVAEFFSNELNVPLKII 61

Query: 68  K-DSLGEDHILPLAIL--GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
           + D L E   L  + L  G+I H S  +   ++I      + +VP RN++ +  AA+L  
Sbjct: 62  RVDFLEEFAKLSESSLVKGNIPHVSAKELEDIEIARETARSVWVPARNLVLISIAASLLD 121

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            LG  +IV+G    +   +PD   + +  +   +     S V V  PL+ L K    KL 
Sbjct: 122 ALGGGDIVVGFNREEGRTFPDNTLEFVERVNKVLEYATMSKVKVVAPLIDLDKKGIAKLL 181

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
           ++ G +       E S++CY  +          C  C +C  R +G +E
Sbjct: 182 KEFGAK------YEYSNSCYDPQGFTEDGKPIHCGKCESCVRRHRGLIE 224


>gi|148243543|ref|YP_001228700.1| PP-loop superfamily ATPase [Synechococcus sp. RCC307]
 gi|189029542|sp|A5GWT8|QUEC_SYNR3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|147851853|emb|CAK29347.1| Predicted PP-loop superfamily ATPase [Synechococcus sp. RCC307]
          Length = 222

 Score =  142 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 67/233 (28%), Positives = 103/233 (44%), Gaps = 20/233 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            + + + L SGG DS+T  + A +   RV  LSFDYGQR++ EL     V + +      
Sbjct: 1   MSSTTIALLSGGLDSATAAALAREAGHRVIGLSFDYGQRHQRELRAAAEVAQALG----- 55

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKI---QDNNLPNTFVPGRNIIFLVFAATLA 123
               L E H + + +      S    +  +     QD  +P+T+VPGRN +F+    +LA
Sbjct: 56  ----LAEHHTINVNLAAWGGSSLTDLDQPVPDQGVQDGVIPSTYVPGRNTVFIALGLSLA 111

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              G   +V+GV   DYSGYPDCR D + A +   +L   S    H   +W    E W  
Sbjct: 112 EAKGAERLVLGVNAIDYSGYPDCRPDYLDAYQHLADLASRSGREGHGTQLWAPLVE-WSK 170

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            + +     +N+ +  + +CY G           C  C +C +R     E   
Sbjct: 171 TKIVEEALRLNVPIASTWSCYAGGDHP-------CGVCDSCRIRDAALREAGR 216


>gi|291522440|emb|CBK80733.1| preQ(0) biosynthesis protein QueC [Coprococcus catus GD/7]
          Length = 225

 Score =  142 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 67/235 (28%), Positives = 94/235 (40%), Gaps = 26/235 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            AL+L SGG DS+TCL  A+D++  D V  L+  YGQR+  E+E      K +       
Sbjct: 2   KALVLSSGGVDSTTCLGLAVDKYGSDNVIALAITYGQRHTKEIEAA----KAVAAYYHVE 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMK-----IQDNNLPNTFVPGRNIIFLVFAATL 122
              L    I   +    +SHS                D    +T+VP RN +FL  AA++
Sbjct: 58  MLHLDLTPIFQYSDCSLLSHSDQAIPEESYAEQLQHSDGKPVSTYVPFRNGLFLSSAASI 117

Query: 123 AYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           A   G   I  G    D +G  YPDC      A+  AI  G    + V  P + L K + 
Sbjct: 118 ALSKGCDVIYYGAHSDDAAGNAYPDCSEVFKNAMNQAIYEGSGHQLKVEAPFVNLTKADV 177

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K   ++      N+  E + +CY G           C  C  C  R K +    
Sbjct: 178 VKKGLEL------NVPYELTWSCYEGGEKP-------CGKCGTCIDRAKAFAANG 219


>gi|298250153|ref|ZP_06973957.1| exsB protein [Ktedonobacter racemifer DSM 44963]
 gi|297548157|gb|EFH82024.1| exsB protein [Ktedonobacter racemifer DSM 44963]
          Length = 252

 Score =  142 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 57/239 (23%), Positives = 97/239 (40%), Gaps = 18/239 (7%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           ++  SA+L+ SGG DS     +       +  LSF+YGQ++  EL         I  L  
Sbjct: 5   RRGESAVLIVSGGMDSCVLSHYYAAAGFDLHLLSFNYGQKHVKELTYAER---YISALRE 61

Query: 66  KWKDSLGEDHILPLAIL------GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           ++ +   +  ++ L I       G    +           D+++  T VP RN   L+ A
Sbjct: 62  RYSNLEIQHQVVALPIAHLSPNSGSALLNPDQSMPHGHYTDDSMKATVVPYRNPNMLLQA 121

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-SHVTVHTPLMWLKKY 178
           AT+A+      +       DY+ YPDCR + + A  T +N  M+   VTV  P M   K 
Sbjct: 122 ATVAWNENARVVAFAAHYGDYAQYPDCRQEFVDAFNTMLNRAMDSDQVTVEVPFMRFSKA 181

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +  +    +      ++  E + +CY G  +   +    C  C  C  R + +     +
Sbjct: 182 QIARFGASL------DVPFELTWSCYEGGSEGFGD--KHCGHCGTCVERYEAFKHAGVE 232


>gi|159905116|ref|YP_001548778.1| exsB protein [Methanococcus maripaludis C6]
 gi|254764359|sp|A9A873|QUEC_METM6 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|159886609|gb|ABX01546.1| exsB protein [Methanococcus maripaludis C6]
          Length = 233

 Score =  142 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 48/234 (20%), Positives = 94/234 (40%), Gaps = 10/234 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWK 68
            A+ + SGG DS+     A      + T++F+YGQ     E++    + + +        
Sbjct: 2   KAICVLSGGLDSAVTSLVAKSENYDITTVTFNYGQMALNQEIKSAKKISEILNADNHVID 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  +         G+I           +  +  +   +VP RN+I    A+  A  +  
Sbjct: 62  INFVKKFSKSGLNTGNIPEPEKEDLDDFEKSEKTMKAVWVPARNMIMFSIASGFAEGIDA 121

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I  G+ + +   +PD   + I     ++  G  + V +  PL  L K E  KL +++ 
Sbjct: 122 EKIFSGLNKEEGVTFPDNTPEFIERFNKSLEYGTLNKVKMVAPLYKLNKPEIAKLGKELE 181

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKY 238
            +  + +I + S++CY   R+        C +C +C  R++ + E       KY
Sbjct: 182 LKLDLEVI-KYSYSCYRDNRE----DYLHCGTCESCMRRKRAFKEAGIVDPTKY 230


>gi|88809457|ref|ZP_01124965.1| ExsB [Synechococcus sp. WH 7805]
 gi|88786676|gb|EAR17835.1| ExsB [Synechococcus sp. WH 7805]
          Length = 229

 Score =  142 bits (357), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 71/239 (29%), Positives = 111/239 (46%), Gaps = 22/239 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+ +     +A+ L SGG DS+T  + A     RV  LSFDYGQR++ EL+    +    
Sbjct: 1   MSSMTDT--TAIALLSGGLDSATAAALAKAAGCRVIGLSFDYGQRHRRELQAAKEIA--- 55

Query: 61  VELMPKWKDSLGEDHIL--PLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLV 117
                    +L E H +   LA  G  S +  T ++    +Q++ +P+T+VPGRN +F+ 
Sbjct: 56  ------LALNLLEHHTISVNLASWGGSSLTDTTLSLPTDGVQEDAIPSTYVPGRNTVFIS 109

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
              +LA   G   +V+G+   DYSGYPDCR D +RA +T  NL  +       P +W   
Sbjct: 110 IGLSLAEARGAEQVVLGINAVDYSGYPDCRPDYLRAFQTLANLSSKVGREGRGPRLWAPL 169

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            E W   + +     + + +E + +CY G           C  C +C +R         
Sbjct: 170 VE-WSKQRIVEEALRLGVPIESTWSCYSGG-------AVPCGRCDSCRIRDAALSAAGR 220


>gi|297621469|ref|YP_003709606.1| Queuosine biosynthesis protein QueC [Waddlia chondrophila WSU
           86-1044]
 gi|297376770|gb|ADI38600.1| Queuosine biosynthesis protein QueC [Waddlia chondrophila WSU
           86-1044]
          Length = 212

 Score =  141 bits (356), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 60/227 (26%), Positives = 91/227 (40%), Gaps = 21/227 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DS+  L+ A         LSFDYGQR+KVELE    +             
Sbjct: 2   KAIVLLSGGIDSTVVLAMAQSLGRECTALSFDYGQRHKVELEHAAHIAHYYKVPQIIINI 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           S        L    ++  +     ++       +P+T+VP RN +FL +AA  A  +   
Sbjct: 62  SPACFENTALVNALNVPKNRTLDEIS----KGGIPSTYVPARNTLFLAYAAGQAEIMNAE 117

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKKYETWKLA 184
            I  G    D + YPDCR +   A +  +    +         + TPL+   K    +  
Sbjct: 118 EIHCGPNLLDRNCYPDCRPEFYSAFQQVLASATKQGAEGNPPRIVTPLINWDKNRIVQEG 177

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
           + +G        L+ + +CY          G  C  C AC LRQ+  
Sbjct: 178 RKLGA------PLDTTFSCYSP------SAGKACGMCDACILRQEAL 212


>gi|238921902|ref|YP_002935416.1| queuosine biosynthesis protein QueC [Eubacterium eligens ATCC
           27750]
 gi|238873574|gb|ACR73282.1| queuosine biosynthesis protein QueC [Eubacterium eligens ATCC
           27750]
          Length = 227

 Score =  141 bits (356), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 61/236 (25%), Positives = 94/236 (39%), Gaps = 27/236 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            AL+L SGG DS+T L+ A+ R+  D V  LS  YGQ++  E++      K +       
Sbjct: 2   KALVLSSGGVDSTTALALAVSRYGKDNVIALSVSYGQKHDKEIQAA----KAVSAFYGVE 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMK------IQDNNLPNTFVPGRNIIFLVFAAT 121
           +  L    I   +    +  S+               +     +T+VP RN +FL  AA+
Sbjct: 58  QLFLDLSKIFQYSNCSLLQQSTEEIPEESYARQIEKTEGEKPVSTYVPFRNGLFLSSAAS 117

Query: 122 LAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           +A     + I+ G    D +G  YPDC      A+  AI  G    + V  P + + K E
Sbjct: 118 IALSKDCSVILYGAHADDSAGFAYPDCSPMFNDAMNQAIFEGSGHQLKVEAPFVNMTKAE 177

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
             K+  ++      N   E + +CY GK          C  C  C  R   +    
Sbjct: 178 VVKMGLEL------NAPYELTWSCYEGKDVP-------CGKCGTCIDRAAAFAANG 220


>gi|313894320|ref|ZP_07827885.1| protein ExsB [Veillonella sp. oral taxon 158 str. F0412]
 gi|313441144|gb|EFR59571.1| protein ExsB [Veillonella sp. oral taxon 158 str. F0412]
          Length = 229

 Score =  141 bits (356), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 61/242 (25%), Positives = 100/242 (41%), Gaps = 26/242 (10%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +   A++LFSGG DS+TCL+ A++RF  D V  LS  YGQ++  ELE  + + +    
Sbjct: 1   MAQKQKAIVLFSGGVDSTTCLALAIERFGKDNVVPLSIQYGQKHSKELEAAVAILEYYG- 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKN-----VAMKIQDNNLPNTFVPGRNIIFLV 117
                  ++    +   +    ++ SS            + +     +T+VP RN +FL 
Sbjct: 60  ---IEGKTMDVTKLFAFSNCSLLTQSSEEIPQGSYKEQQEAEGEGTVSTYVPFRNGLFLS 116

Query: 118 FAATLAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
            AA+LA  L    I  G    D +G  YPDC     +++  AI  G     ++  P +  
Sbjct: 117 AAASLALSLDCGYIYYGAHSDDAAGNAYPDCTEHFYKSMGDAIFEGSGKECSLEAPFINF 176

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K +  K    +G      +    + +CY G           C  C  C  RQ  +    
Sbjct: 177 NKADIVKEGLRLG------VPYHLTWSCYEGGDKP-------CGHCGTCIDRQAAFQANG 223

Query: 236 EK 237
            +
Sbjct: 224 VE 225


>gi|78185805|ref|YP_378239.1| ExsB [Synechococcus sp. CC9902]
 gi|110816271|sp|Q3AUG1|QUEC_SYNS9 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|78170099|gb|ABB27196.1| ExsB [Synechococcus sp. CC9902]
          Length = 226

 Score =  141 bits (356), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 73/236 (30%), Positives = 109/236 (46%), Gaps = 32/236 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           +A+ L SGG DS+T  + A +  DRV  LSFDYGQR++ EL+    V   +         
Sbjct: 5   TAIALLSGGLDSATAAALAQEAGDRVIGLSFDYGQRHRRELKAAAKVAAHL--------- 55

Query: 70  SLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +L E H + +  LG    S+LT          +++  +P T+VPGRN +F+    +LA  
Sbjct: 56  NLAEHHQVDVN-LGAWGGSALTDPNQTVPTSGVEEGVIPVTYVPGRNTVFIAIGLSLAEA 114

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW-----LKKYET 180
            G   +V+GV   DYSGYPDCR D + A +T   L  ++    H P +W       K + 
Sbjct: 115 RGAERLVLGVNAVDYSGYPDCRPDYLDAFQTLATLSSKAGREGHGPQLWAPLVQWSKTKI 174

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
              A  +G      + + E+ +CY G           C  C +C +R     E   
Sbjct: 175 VDEALRLG------VPIGETWSCYSGGSRP-------CGVCDSCRIRDSALREAGR 217


>gi|269798608|ref|YP_003312508.1| exsB protein [Veillonella parvula DSM 2008]
 gi|269095237|gb|ACZ25228.1| exsB protein [Veillonella parvula DSM 2008]
          Length = 229

 Score =  141 bits (355), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 61/238 (25%), Positives = 94/238 (39%), Gaps = 18/238 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +   A++LFSGG DS+TCL+ A++RF  D V  LS  YGQ++  ELE  + + +    
Sbjct: 1   MAQKQKAVVLFSGGVDSTTCLALAIERFGKDNVVPLSIQYGQKHSKELEAAIAILEYYGM 60

Query: 63  LMPKWKD-SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                    L       L           +       +     +T+VP RN +FL  AA+
Sbjct: 61  EGKTMDVTKLFAFSNCSLLTQSSEDIPQGSYKEQQDAEGEGTVSTYVPFRNGLFLSAAAS 120

Query: 122 LAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           LA  L    I  G    D +G  YPDC     +++  AI  G     ++  P +   K +
Sbjct: 121 LALSLDCGYIYYGAHSDDAAGNAYPDCTEHFYKSMGDAIFEGSGKECSLEAPFINANKAD 180

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
             K    +G      +    + +CY G           C  C  C  R K +     +
Sbjct: 181 IVKEGLRLG------VPYHLTWSCYEGGDKP-------CGHCGTCIDRAKAFHANGVE 225


>gi|303229849|ref|ZP_07316626.1| protein ExsB [Veillonella atypica ACS-134-V-Col7a]
 gi|302515479|gb|EFL57444.1| protein ExsB [Veillonella atypica ACS-134-V-Col7a]
          Length = 229

 Score =  141 bits (355), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 63/239 (26%), Positives = 101/239 (42%), Gaps = 20/239 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +   A++LFSGG DS+TCL+ A++RF  + V  LS  YGQ++  ELE    V      
Sbjct: 1   MAQKQKAVVLFSGGVDSTTCLALAIERFGKENVVPLSIQYGQKHSKELEAAANVLSYYG- 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN--NLPNTFVPGRNIIFLVFAA 120
           +  K  D          ++L   +    T +   +  ++     +T+VP RN +FL  AA
Sbjct: 60  IEGKTMDVTKLFAFSNSSLLKQSTEDVPTGSYKEQQDEHGEGPVSTYVPFRNGLFLSAAA 119

Query: 121 TLAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
           +LA  L    I  G    D +G  YPDC      ++  AI  G     ++  P +   K 
Sbjct: 120 SLALSLDCGYIYYGAHADDAAGNAYPDCTETFYTSMGNAIFEGSGKECSLEAPFINRNKA 179

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +  +    +G      +  E + +CY G           C  C  C  RQ+ +     +
Sbjct: 180 DVVREGLRLG------VPYELTWSCYEGGDHP-------CGHCGTCIDRQEAFRANGVE 225


>gi|254469725|ref|ZP_05083130.1| exsB protein [Pseudovibrio sp. JE062]
 gi|211961560|gb|EEA96755.1| exsB protein [Pseudovibrio sp. JE062]
          Length = 232

 Score =  141 bits (354), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 56/237 (23%), Positives = 92/237 (38%), Gaps = 25/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +++ SGG DS T         + +  +SFDYGQR+K EL+      K++         
Sbjct: 2   KTIVISSGGLDSVTLAYKVAREHELLGLVSFDYGQRHKKELDYAAHAAKQLGVPHHILDM 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           S    H      L   + +           + N+  T VP RN I L     +A      
Sbjct: 62  SQIGAH------LSGSALTDDVDVPDGHYAEENMKVTVVPNRNAIMLSIGFGIAAAQQAD 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLG--MESHVTVHTPLMWLKKYETWKLAQDI 187
            +   V   D+  YPDCR   I++ E+   L     ++V+++TP + + K         I
Sbjct: 116 AVAAAVHGGDHFIYPDCRPGFIKSFESMQKLALDGYANVSLYTPFVEISKGAIVAEGARI 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW----MEFKEKYQD 240
                 N+  E++ +CY G           C  C  C  R++ +    +E   +Y D
Sbjct: 176 ------NVPFEDTWSCYKGGEK-------HCGRCGTCVERREAFDIAGVEDPTEYAD 219


>gi|150403146|ref|YP_001330440.1| exsB protein [Methanococcus maripaludis C7]
 gi|167016436|sp|A6VIL3|QUEC_METM7 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|150034176|gb|ABR66289.1| exsB protein [Methanococcus maripaludis C7]
          Length = 233

 Score =  141 bits (354), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 49/234 (20%), Positives = 95/234 (40%), Gaps = 10/234 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWK 68
            A+ + SGG DS+     A      + T++F+YGQ     E++    + + +        
Sbjct: 2   RAICVLSGGLDSAVTSLAAKFENYDITTVTFNYGQMALNQEIKSAKKISEILNADHHVID 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  ++        G+I           +  +  +   +VP RN+I    A+  A  +G 
Sbjct: 62  INFVKEFSKSGLNTGEIPEPEKEDLDDFEKSEKTMKAVWVPARNMIMFSIASGFAEGIGA 121

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I  G+ + +   +PD   + I     ++  G  + V +  PL  L K E  KL +++ 
Sbjct: 122 EKIFSGLNKEEGVTFPDNTPEFIERFNKSLEYGTLNKVKMVAPLYELNKPEIAKLGKELE 181

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKY 238
            +  + + L+ S++CY        E    C +C +C  R++ + E       KY
Sbjct: 182 VKLDLEV-LKYSYSCYR----DNGEDYLHCGTCESCMRRKRAFKEAGIVDPTKY 230


>gi|225847995|ref|YP_002728158.1| ExsB protein [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644692|gb|ACN99742.1| ExsB protein [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 219

 Score =  141 bits (354), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 61/240 (25%), Positives = 98/240 (40%), Gaps = 30/240 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K  + ++L SGG DS+T L  A   F+ V  +SF YGQ++ +E+E    + K      
Sbjct: 1   MIKEKNIIVLLSGGMDSATLLWLAKQNFEEVYAISFIYGQKHSIEIEYAKELAK------ 54

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKN---VAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                 + +  I+ L  L  +  S+LT     V  +   +  P T VP RN+ FL  AA 
Sbjct: 55  ---IADVKQHFIVELPHLKQLGKSALTDPSLEVPSQDYTDQPPITTVPMRNLTFLSIAAA 111

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLK 176
            A    I NI IG+   D             A        +      + + ++TP + + 
Sbjct: 112 FADVYEIENIGIGIHSLDSPYPDCRAEFASAAEAAINASSVMVANKKNRIKIYTPFLGMS 171

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           K +  KL   +G      +  E++++CY G           C  C  C  R++     KE
Sbjct: 172 KVDIAKLGYKLG------VPFEKTYSCYKGTNPP-------CGECATCRQREEALKSIKE 218


>gi|15604537|ref|NP_221055.1| hypothetical protein RP694 [Rickettsia prowazekii str. Madrid E]
 gi|81554792|sp|Q9ZCM9|QUEC_RICPR RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|3861231|emb|CAA15131.1| unknown [Rickettsia prowazekii]
          Length = 227

 Score =  141 bits (354), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 67/241 (27%), Positives = 104/241 (43%), Gaps = 29/241 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             ++ L SGG DS+T L+ A +    +  +SF+YGQRN  EL     + KK      K  
Sbjct: 2   KKSVNLLSGGTDSATVLAIASEMCYEIYAMSFNYGQRNNAELRKVKELIKKYNVKQHKIV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKI----QDNNLPNTFVPGRNIIFLVFAATLAY 124
           D       + L   G  + +    +V            +P T+VP RN IFL +A   A 
Sbjct: 62  D-------IDLRAFGGSALTDDNIDVPYYHGINALPEIVPVTYVPARNTIFLSYAVGFAE 114

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYE 179
            +G  +I IGV  +D + YPDC  + I++ E  +NL     V      +H PL+ + K +
Sbjct: 115 VIGSQDIFIGVHTSDSANYPDCCPEYIQSFEKMVNLATNMGVQGKKITIHAPLIDMTKEQ 174

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
             +    +G      +  + + +CY    D        C +C AC +R   +   K   Q
Sbjct: 175 IIRTGLKLG------VDYKNTISCYSPTEDDLS-----CGNCLACIIRLDAFK--KNNIQ 221

Query: 240 D 240
           D
Sbjct: 222 D 222


>gi|282889933|ref|ZP_06298468.1| hypothetical protein pah_c008o016 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500126|gb|EFB42410.1| hypothetical protein pah_c008o016 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 221

 Score =  141 bits (354), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 64/233 (27%), Positives = 95/233 (40%), Gaps = 27/233 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DS+  L+   ++      +SFDYGQR++VELE    +             
Sbjct: 2   KAIVLLSGGLDSAVMLARLHEQQIETLAISFDYGQRHRVELEFAKKIADFYGIEHEVIP- 60

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDN----NLPNTFVPGRNIIFLVFAATLAYR 125
                 I PL   G  + +S       K +++    ++P T+VP RN +FL +A   A  
Sbjct: 61  ------IDPLIFRGGSALTSSATPQKGKSKEDILKQSIPFTYVPARNTLFLAYALAKAEM 114

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYET 180
            G   I  G    D+  YPDCR     A +   N   +  V      + TPL+   K E 
Sbjct: 115 HGADQIHFGSNAMDFLSYPDCRPGYFEAAQELFNRATKQSVEGKAPQIVTPLLKWTKEEI 174

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
            K    +       +  E + +CY          G  C  C AC LRQ  ++ 
Sbjct: 175 VKEGYRL------KVPFELTSSCYDP-----TANGQPCQQCDACTLRQDAFLS 216


>gi|56750230|ref|YP_170931.1| transcription regulator [Synechococcus elongatus PCC 6301]
 gi|81300142|ref|YP_400350.1| ExsB [Synechococcus elongatus PCC 7942]
 gi|81596804|sp|Q5N5K7|QUEC_SYNP6 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|110816270|sp|Q31NK6|QUEC_SYNE7 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|56685189|dbj|BAD78411.1| transcription regulator [Synechococcus elongatus PCC 6301]
 gi|81169023|gb|ABB57363.1| ExsB [Synechococcus elongatus PCC 7942]
          Length = 231

 Score =  141 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DS+T  + A+        LSF YGQR+  ELE    V   +      + D
Sbjct: 3   KAVVLLSGGLDSATAAAQAIADGYEAIALSFRYGQRHVRELEAARSVAAALGINQHFFVD 62

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                  + +A  G  S +   + +    +    +P+T+VPGRN +F+  A +LA     
Sbjct: 63  -------VNIAQWGGSSLTDAAEPLPGSGVVAGEIPSTYVPGRNTVFIALALSLAEAQQA 115

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKL 183
           + I +G+   DYSGYPDCR D + A +   +L  +  V      +  PL+   K +  + 
Sbjct: 116 SAIYLGINAVDYSGYPDCRPDYLAAFQQLASLSSKVGVEGQAPQLVAPLIHDHKVDIVRR 175

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           A  +G      + +  + +CY G  +        C  C +C +R +  +E  
Sbjct: 176 AVVLG------VPIPATWSCYAGGAE-------ACGRCDSCRIRDRALIEAG 214


>gi|242309654|ref|ZP_04808809.1| queuosine biosynthesis protein queC [Helicobacter pullorum MIT
           98-5489]
 gi|239523655|gb|EEQ63521.1| queuosine biosynthesis protein queC [Helicobacter pullorum MIT
           98-5489]
          Length = 223

 Score =  141 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 57/232 (24%), Positives = 91/232 (39%), Gaps = 19/232 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS   ++ AL     V  L  +YGQR +   +        I +     +
Sbjct: 2   DKAIVLASGGLDSCVSIACALKDGYEVCLLHINYGQRTQSREDRA---FSDIADFYGITQ 58

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN-LPNTFVPGRNIIFLVFAATLAYRLG 127
             + +   L       +  SS+             +P+T+VP RN   +  A + A  + 
Sbjct: 59  KLIVDISYLRQIGGSSLVDSSMPIEEDTIPSAKGAIPSTYVPFRNANMISIAVSWAEVIR 118

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG--MESHVTVHTPLMWLKKYETWKLAQ 185
              I IG  E D SGYPDCR    +     + +G   ++ V + TPL+ L K E  +   
Sbjct: 119 AKKIYIGAVEEDSSGYPDCREIFYQKFNDLLKVGLSPKNEVEILTPLIHLSKKEIVQKGI 178

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           ++         L  + +CY             C  C +C LR +G+     K
Sbjct: 179 EL------EAPLHLTWSCYQ-------NENKACGVCESCKLRLRGFELAGVK 217


>gi|57642198|ref|YP_184676.1| ExsB family transcriptional regulator [Thermococcus kodakarensis
           KOD1]
 gi|74505472|sp|Q5JHU5|QUEC_PYRKO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|57160522|dbj|BAD86452.1| predicted transcription regulator, ExsB family [Thermococcus
           kodakarensis KOD1]
          Length = 239

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 61/238 (25%), Positives = 102/238 (42%), Gaps = 28/238 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++LFSGG DS+ CL WA   +D V  L+ +YG            V  K+ E   K  
Sbjct: 2   KRAVVLFSGGLDSTACLYWAKKNYDEVIMLTVNYGSN-------EEKVTNKVAEFFSKEL 54

Query: 69  DSLGEDHILPLAIL-------------GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
           D      I+ L  L             G+    +  +   +++      + +VP RN++ 
Sbjct: 55  D--VPLKIVRLDFLEEFSKLRGTTLVGGETPKVTGEELENIEVAQETAKSVWVPARNVVL 112

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
           +  AA+L   LG  +IV+G    + + +PD   + +  +   +  G  + V V  PL+ L
Sbjct: 113 IAVAASLLDALGGGDIVVGFNAEEGATFPDNTPEFVEKMNEMLKYGTMAEVRVVAPLINL 172

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
            K    KL +++G +       E S++CY+ K          C  C +C  R +G +E
Sbjct: 173 DKRGIAKLLKELGAK------YEYSNSCYMPKGFTEDGKPIHCGECESCVRRHRGLIE 224


>gi|303231219|ref|ZP_07317957.1| protein ExsB [Veillonella atypica ACS-049-V-Sch6]
 gi|302514126|gb|EFL56130.1| protein ExsB [Veillonella atypica ACS-049-V-Sch6]
          Length = 229

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 63/239 (26%), Positives = 101/239 (42%), Gaps = 20/239 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +   A++LFSGG DS+TCL+ A++RF  + V  LS  YGQ++  ELE    V      
Sbjct: 1   MAQKQKAVVLFSGGVDSTTCLALAIERFGKENVVPLSIQYGQKHSKELEAAANVLSYYG- 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN--NLPNTFVPGRNIIFLVFAA 120
           +  K  D          ++L   +    T +   +  ++     +T+VP RN +FL  AA
Sbjct: 60  IEGKTMDVTKLFAFSNSSLLKQSTEDVPTGSYKEQQDEHGEGPVSTYVPFRNGLFLSAAA 119

Query: 121 TLAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
           +LA  L    I  G    D +G  YPDC      ++  AI  G     ++  P +   K 
Sbjct: 120 SLALSLDCGYIYYGAHADDAAGNAYPDCTETFYTSMGNAIFEGSGKECSLEAPFINRNKA 179

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +  +    +G      +  E + +CY G           C  C  C  RQ+ +     +
Sbjct: 180 DVVREGLRLG------VPYELTWSCYEGGDHP-------CGHCGTCIDRQEAFRANGVE 225


>gi|241759321|ref|ZP_04757427.1| ExsB protein [Neisseria flavescens SK114]
 gi|241320457|gb|EER56754.1| ExsB protein [Neisseria flavescens SK114]
          Length = 219

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 89/233 (38%), Positives = 141/233 (60%), Gaps = 23/233 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +   AL++FSGGQDS+TCL  A+  +  + V+ ++F YGQR+ +ELE    + + +    
Sbjct: 2   EKQQALVIFSGGQDSTTCLIQAIQTYGCENVQAITFQYGQRHAIELEQARWIAQDLG--- 58

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                   +  +L L+++  I+H++L  + A ++   + LPNTFV GRN +FL++AA  A
Sbjct: 59  -------VKQTVLDLSLMQQITHNALMDDTAYIETAPDGLPNTFVDGRNALFLLYAAIYA 111

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
               I +I+ GVCETD+SGYPDCR   ++++   +NL M+    +HTPLM+L K +TW L
Sbjct: 112 KGQRIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYAFQIHTPLMYLTKAQTWAL 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           A ++G    ++ I E +HTCY G          GC+ CP+C LR++G  E+ E
Sbjct: 172 ADEMGA---LDYICEHTHTCYNGVVG-------GCHECPSCILRERGLSEYLE 214


>gi|323141811|ref|ZP_08076677.1| protein ExsB [Phascolarctobacterium sp. YIT 12067]
 gi|322413703|gb|EFY04556.1| protein ExsB [Phascolarctobacterium sp. YIT 12067]
          Length = 245

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 92/230 (40%), Gaps = 17/230 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI-VELMPKW 67
             L+L SGG DSSTCL+ A ++  D V  LS  YGQ++  EL     +     VEL+   
Sbjct: 21  KVLVLLSGGVDSSTCLALAKEKYGDNVLALSMSYGQKHAKELAAAQAIADYYHVELLHMD 80

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       L    + S    +    +K       +T+VP RN +FL  AA++A    
Sbjct: 81  LSKIFAHSKCSLLQGSEESVPHASYAEQLKESKGEPVSTYVPFRNGLFLSAAASIALEYE 140

Query: 128 ITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
              I  G    D +G  YPDC  +   ++  A+ LG    V +  P +   K +      
Sbjct: 141 CNEIYYGPHADDAAGNAYPDCSVEFNESMNLAVYLGSGRKVRLVAPFVDKTKKDIVAEGL 200

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            +G      +  E + +CY G           C+ C  C  R+  +    
Sbjct: 201 RLG------VPYELTWSCYDGDEKP-------CHKCGTCIDREAAFAANG 237


>gi|292572327|gb|ADE30242.1| Trans-regulatory protein ExsB [Rickettsia prowazekii Rp22]
          Length = 236

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 67/244 (27%), Positives = 104/244 (42%), Gaps = 29/244 (11%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                ++ L SGG DS+T L+ A +    +  +SF+YGQRN  EL     + KK      
Sbjct: 8   STMKKSVNLLSGGTDSATVLAIASEMCYEIYAMSFNYGQRNNAELRKVKELIKKYNVKQH 67

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKI----QDNNLPNTFVPGRNIIFLVFAAT 121
           K  D       + L   G  + +    +V            +P T+VP RN IFL +A  
Sbjct: 68  KIVD-------IDLRAFGGSALTDDNIDVPYYHGINALPEIVPVTYVPARNTIFLSYAVG 120

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLK 176
            A  +G  +I IGV  +D + YPDC  + I++ E  +NL     V      +H PL+ + 
Sbjct: 121 FAEVIGSQDIFIGVHTSDSANYPDCCPEYIQSFEKMVNLATNMGVQGKKITIHAPLIDMT 180

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           K +  +    +G      +  + + +CY    D        C +C AC +R   +   K 
Sbjct: 181 KEQIIRTGLKLG------VDYKNTISCYSPTEDDLS-----CGNCLACIIRLDAFK--KN 227

Query: 237 KYQD 240
             QD
Sbjct: 228 NIQD 231


>gi|322378796|ref|ZP_08053225.1| ExsB trans-regulatory protein [Helicobacter suis HS1]
 gi|322380645|ref|ZP_08054797.1| ExsB transcriptional regulator [Helicobacter suis HS5]
 gi|321146967|gb|EFX41715.1| ExsB transcriptional regulator [Helicobacter suis HS5]
 gi|321148826|gb|EFX43297.1| ExsB trans-regulatory protein [Helicobacter suis HS1]
          Length = 242

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 89/238 (37%), Positives = 138/238 (57%), Gaps = 21/238 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             S +L FSGGQDS+T   W+L  F++   L FDY QR+ +ELE    +  ++       
Sbjct: 15  KSSCVLCFSGGQDSTTLALWSLSAFEKTYLLGFDYAQRHGIELEQATKIATQLK------ 68

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT-----FVPGRNIIFLVFAATL 122
                   IL L  L ++S+S+L K     IQ  ++ N      FVP RN +F+  A   
Sbjct: 69  ----LPFKILSLDFLQELSNSALFKKSPQSIQAPHMKNPQLPASFVPDRNALFVTLAHAY 124

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG---MESHVTVHTPLMWLKKYE 179
           A+ LG + +++G+ E DYSGY DCR + + +++T++NLG       +T+  P M++ K +
Sbjct: 125 AFNLGASFVLLGISEQDYSGYFDCRQNFLESLQTSLNLGAFGTPEGITLLAPFMFMSKAQ 184

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            + LAQ +G    ++ ILE++HTCY+G R  R+ +GYGC +CPAC LRQKG+  F ++
Sbjct: 185 EFALAQKLG---FLDFILEQTHTCYIGDRSTRHPYGYGCGTCPACLLRQKGYENFLKE 239


>gi|221135471|ref|ZP_03561774.1| regulator protein [Glaciecola sp. HTCC2999]
          Length = 210

 Score =  140 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 22/221 (9%)

Query: 19  QDSSTCLSWALDRF---DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDH 75
            DS T L   LD+    + +  L+F+YGQ++  E+E    V + +         S     
Sbjct: 1   MDSFTLLHHILDQGLAVNEIAALTFNYGQKHVKEVEFARRVCEALGIQHKVVDISAIN-- 58

Query: 76  ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGV 135
               +++G  S +   +      + +N+ +T VP RN+I L  A   A  L    +  G 
Sbjct: 59  ----SLMGGSSLTDDIEIPEGHYEADNMQSTVVPNRNMILLSMAVAYAVSLEADKVYYGA 114

Query: 136 CETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNL 195
              D++ YPDCR + ++ ++    +     V++ TP + + K E      ++G      L
Sbjct: 115 HSGDHAIYPDCRPEFVQKMDEVCRIANYQSVSIDTPFIHMSKIEILTRGVNLG------L 168

Query: 196 ILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
              ++ TCY G+          C  C AC  R + + E  +
Sbjct: 169 DYSQTWTCYNGREH-------ACGKCGACVERLEAFTENGQ 202


>gi|313906545|ref|ZP_07839875.1| exsB protein [Eubacterium cellulosolvens 6]
 gi|313468614|gb|EFR63986.1| exsB protein [Eubacterium cellulosolvens 6]
          Length = 227

 Score =  140 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 58/238 (24%), Positives = 94/238 (39%), Gaps = 27/238 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            A++L SGG DS+T L  A+ ++  + V  LS  YGQ++  E++    V +         
Sbjct: 2   KAMVLSSGGVDSTTALGLAIKKYGKENVIALSVSYGQKHDKEIQAARAVAEYYG----IE 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQD------NNLPNTFVPGRNIIFLVFAAT 121
           +  L    I   +    +  S+         +           +T+VP RN +FL  AA+
Sbjct: 58  QLFLDLSKIFSYSNCSLLKQSTEEIPEESYAEQIRETGGEKPVSTYVPFRNGLFLSSAAS 117

Query: 122 LAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           LA   G + I  G    D +G  YPDC     +A+  AI  G    + +  P + + K  
Sbjct: 118 LALSKGCSVIYYGAHADDSAGFAYPDCSPVFNKAMNDAIWEGSGHQLRIEAPFVNMNKAG 177

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
             K+  ++G      +  E + +CY G           C  C  C  R   +     K
Sbjct: 178 VVKMGLELG------VPYELTWSCYEGGETP-------CGKCGTCIDRAAAFAANGVK 222


>gi|282849824|ref|ZP_06259208.1| protein ExsB [Veillonella parvula ATCC 17745]
 gi|282580761|gb|EFB86160.1| protein ExsB [Veillonella parvula ATCC 17745]
          Length = 229

 Score =  140 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 61/238 (25%), Positives = 95/238 (39%), Gaps = 18/238 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +   A++LFSGG DS+TCL+ A++RF  D V  LS  YGQ++  ELE  + + +    
Sbjct: 1   MAQKQKAVVLFSGGVDSTTCLALAIERFGKDNVVPLSIQYGQKHSKELEAAIAILEYYNM 60

Query: 63  LMPKWKD-SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                    L       L +         +       +     +T+VP RN +FL  AA+
Sbjct: 61  KGKTMDVTKLFAFSNCSLLVQSSEDIPQGSYKEQQDAEGKGTVSTYVPFRNGLFLSAAAS 120

Query: 122 LAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           LA  L    I  G    D +G  YPDC     +++  AI  G     ++  P +   K +
Sbjct: 121 LALSLDCGYIYYGAHSDDAAGNAYPDCTEHFYKSMGDAIFEGSGKECSLEAPFINSNKAD 180

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
             K    +G      +    + +CY G           C  C  C  R K +     +
Sbjct: 181 IVKEGLRLG------VPYHLTWSCYEGGDKP-------CGHCGTCIDRAKAFHANGVE 225


>gi|193213013|ref|YP_001998966.1| exsB protein [Chlorobaculum parvum NCIB 8327]
 gi|254764320|sp|B3QPB3|QUEC_CHLP8 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|193086490|gb|ACF11766.1| exsB protein [Chlorobaculum parvum NCIB 8327]
          Length = 227

 Score =  140 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 62/234 (26%), Positives = 92/234 (39%), Gaps = 29/234 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWK 68
            A+LL SGG DS    + A      +  +  +YGQR  + ELEC   +            
Sbjct: 2   KAVLLVSGGMDSLVATALAHHHGFELAAMHVNYGQRTWQKELECFRQICDHYG------- 54

Query: 69  DSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             + +   +    LG I  SSLT          +   ++P ++VP RN  FL  A + + 
Sbjct: 55  --IEKRLEIDAGFLGAIGGSSLTDAAIPVGPADLAGTDIPTSYVPFRNANFLSMAVSWSE 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWK 182
            +G   I IG  E D SGYPDCR     A    I  G      + + TPL+ + K E  K
Sbjct: 113 VIGANRIYIGAVEEDSSGYPDCRKVFYDAFNQVIEHGTRPETSIEIVTPLIDMSKAEIVK 172

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
              ++      +     S +CY  +       G  C  C +C  R + +     
Sbjct: 173 RGMEL------DAPFHFSWSCYKSE-------GKACGVCDSCARRLRAFASVGI 213


>gi|150399982|ref|YP_001323749.1| exsB protein [Methanococcus vannielii SB]
 gi|167016438|sp|A6URL5|QUEC_METVS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|150012685|gb|ABR55137.1| exsB protein [Methanococcus vannielii SB]
          Length = 233

 Score =  140 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 47/228 (20%), Positives = 93/228 (40%), Gaps = 6/228 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWK 68
            A+ + SGG DS      A      + T++F+YGQ     EL+    + K +      + 
Sbjct: 2   KAISVLSGGLDSLVTSMVAKKENSEIATVTFNYGQMALDKELKSAKKISKVLGAENQVFD 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            S  ++        G+I +         K  +  + + +VP RN+I    A+  A  +  
Sbjct: 62  ISFVKEFSKSGLNTGNIPNPKKDDLDDFKESEKTMKSVWVPARNMIMFSIASGFAEGINA 121

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I  G+ + +   +PD   + I +   ++  G  + V ++ PL  L K E     + + 
Sbjct: 122 EKIYSGLNKEEGVTFPDNSTEFINSFNKSLEYGTLNKVKMYAPLYNLDKVEIATFGKRLE 181

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            +  ++ IL+ S++CY        +    C +C +C  R++ +     
Sbjct: 182 DELGLD-ILKYSYSCYR----DNLKDYLHCGTCESCMRRKRAFESAGI 224


>gi|94971670|ref|YP_593718.1| ExsB [Candidatus Koribacter versatilis Ellin345]
 gi|94553720|gb|ABF43644.1| ExsB [Candidatus Koribacter versatilis Ellin345]
          Length = 257

 Score =  140 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 97/230 (42%), Gaps = 19/230 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            A+++ SGG DS+ C + A+  +  + +  L   YGQR     +        + E +   
Sbjct: 30  KAVVVLSGGMDSTVCATLAVREYGAENIGALHVSYGQRTAAREKQAFAA---VAERLGIQ 86

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                E           ++ +++    A ++  + +P T+VP RN   L  A + A  LG
Sbjct: 87  TRLAVETPFFRAIGGSALTDANIAVPDAGELIGHEIPVTYVPFRNAHLLAMAVSWAEVLG 146

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-HVTVHTPLMWLKKYETWKLAQD 186
            + I IG    D SGYPDCR +   A   A+  G ++  + V TPL+ L+K+E   L  +
Sbjct: 147 ASKIYIGAVAQDSSGYPDCRPEFYEAYNLAVRRGTKAGDIEVVTPLIALRKHEIVSLGLE 206

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           +G         + + +CY             C  C +C LR + +     
Sbjct: 207 LGA------PFDLTWSCY-------SREDCACGVCDSCVLRLRAFEGAGA 243


>gi|88859839|ref|ZP_01134478.1| putative regulator protein [Pseudoalteromonas tunicata D2]
 gi|88817833|gb|EAR27649.1| putative regulator protein [Pseudoalteromonas tunicata D2]
          Length = 207

 Score =  140 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 53/214 (24%), Positives = 83/214 (38%), Gaps = 19/214 (8%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS T L+ A+     V  LSFDYGQR+  EL+    V + +         S     I  
Sbjct: 1   MDSFTVLNKAISEGHEVYALSFDYGQRHVKELKVAAQVCQALNVPHKIVDISAINQLI-- 58

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
               G  S +          Q+ ++ +T VP RN+I L  A   A  L  + +  G    
Sbjct: 59  ----GGSSLTDDIDVPEGHYQEESMKSTIVPNRNMILLSLAVGYAVSLKASQVYYGAHSG 114

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
           D++ YPDCR + ++ +     +     V + +P +   K +       +G      L   
Sbjct: 115 DHAIYPDCRPEFVQKMSDVCKIANYDAVEIVSPYLNNTKIDILTDGLKMG------LDYS 168

Query: 199 ESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
            + TCY G+          C  C AC  R + + 
Sbjct: 169 HTWTCYNGREK-------ACGKCGACQERLEAFR 195


>gi|194335950|ref|YP_002017744.1| exsB protein [Pelodictyon phaeoclathratiforme BU-1]
 gi|194308427|gb|ACF43127.1| exsB protein [Pelodictyon phaeoclathratiforme BU-1]
          Length = 258

 Score =  140 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 63/240 (26%), Positives = 101/240 (42%), Gaps = 30/240 (12%)

Query: 1   MNDIIKKA-PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           M+  +    P A++L SGG DS    + A      +  +  +YGQR           +K+
Sbjct: 1   MSRFVSTTQPKAVVLLSGGMDSLVTTAMAHAAGFELAAMHVNYGQRTW---------QKE 51

Query: 60  IVELMPKWKDSLGEDHI-LPLAILGDISHSSLTKNVA----MKIQDNNLPNTFVPGRNII 114
           +            E  + +    L  I  SSLT          +Q +++P ++VP RN  
Sbjct: 52  LESFRSICSHYNIEQRLEVNADFLAQIGGSSLTDFSMPVGGADLQGSSIPTSYVPFRNAG 111

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPL 172
           FL  A + +  +G + I IG  E D SGYPDCR     A  T I LG +    + + TPL
Sbjct: 112 FLSMAVSWSEVIGASKIFIGAVEEDSSGYPDCRKVFYDAFNTVIVLGTKPETDIAILTPL 171

Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
           + ++K E  +   ++       +  E S +CY  +       G  C  C +C  R + + 
Sbjct: 172 IEMQKSEIVRKGIEL------QVPFELSWSCYKSE-------GKACGLCDSCARRLRAFE 218


>gi|294794492|ref|ZP_06759628.1| ExsB protein [Veillonella sp. 3_1_44]
 gi|294454822|gb|EFG23195.1| ExsB protein [Veillonella sp. 3_1_44]
          Length = 229

 Score =  140 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 61/238 (25%), Positives = 95/238 (39%), Gaps = 18/238 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +   A++LFSGG DS+TCL+ A++RF  D V  LS  YGQ++  ELE  + + +    
Sbjct: 1   MAQKQKAVVLFSGGVDSTTCLALAIERFGKDNVVPLSIQYGQKHSKELEAAIAILEYYNM 60

Query: 63  LMPKWKD-SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                    L       L +         +       +     +T+VP RN +FL  AA+
Sbjct: 61  KGKTMDVTKLFAFSNCSLLVQSSEDIPQGSYKEQQDAEGKGTVSTYVPFRNGLFLSAAAS 120

Query: 122 LAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           LA  L    I  G    D +G  YPDC     +++  AI  G     ++  P +   K +
Sbjct: 121 LALSLDCGYIYYGAHSDDAAGNAYPDCTEQFYKSMGDAIFEGSGKECSLEAPFINANKAD 180

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
             K    +      N+    + +CY G           C  C  C  R K +     +
Sbjct: 181 IVKEGLRL------NVPYHLTWSCYEGGDKP-------CGHCGTCIDRAKAFHANGVE 225


>gi|218961226|ref|YP_001741001.1| exsB protein [Candidatus Cloacamonas acidaminovorans]
 gi|167729883|emb|CAO80795.1| exsB protein [Candidatus Cloacamonas acidaminovorans]
          Length = 222

 Score =  140 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 64/235 (27%), Positives = 96/235 (40%), Gaps = 29/235 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DS    + A+   D V  L F+YGQ  +          K++         
Sbjct: 3   RAIVLLSGGMDSLVTAACAVSECDEVCFLHFNYGQLTEK---------KELSSFEALVNY 53

Query: 70  SLGED-HILPLAILGDISHSSLTKNVAMKIQD----NNLPNTFVPGRNIIFLVFAATLAY 124
                  ++  + L +I  S+LT       +     + +P T+VP RN IFL  A   A 
Sbjct: 54  YQPIQAKVINYSWLSEIGGSALTDRNIPVQKGILSSSKIPVTYVPFRNAIFLCSAVAWAE 113

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH--TPLMWLKKYETWK 182
            +  T I IG  E D SGYPDCR    +A    I  G +  + +   TP++   K E  +
Sbjct: 114 VIQATRIYIGAVEEDSSGYPDCREVFFQAFNKVIATGTKGEIPIEISTPVLHKSKAEIVQ 173

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           L  ++          E S +CY        E    C  C +C LR+K +     +
Sbjct: 174 LGIEL------KAPFELSWSCY-------TENDVACGVCESCLLRKKAFKTAGVE 215


>gi|18976420|ref|NP_577777.1| succinoglycan biosynthesis regulator [Pyrococcus furiosus DSM 3638]
 gi|74537535|sp|Q8U4N3|QUEC_PYRFU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|18891952|gb|AAL80172.1| succinoglycan biosynthesis regulator [Pyrococcus furiosus DSM 3638]
          Length = 240

 Score =  140 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 58/231 (25%), Positives = 105/231 (45%), Gaps = 10/231 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMP 65
               A++LFSGG DS+ CL WA  ++D V  L+ +YG    +V  +      K++   + 
Sbjct: 1   MKRRAVVLFSGGLDSTACLYWAKKQYDEVIMLTVNYGSNEERVTNKVAEYFSKELDVRLK 60

Query: 66  KWK-DSLGEDHILPLAIL--GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
             K D L E   +  + L  G++   +  +   ++       + ++P RN++ +  AA+L
Sbjct: 61  IVKLDFLKEFSEIRGSSLVGGEVPRVTAEELEDIEKASETARSVWIPARNLVLISVAASL 120

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              LG  +I++G    + + +PD   + +  +  A+     + V V  PL+ L K    K
Sbjct: 121 LDALGGGDIIVGFNAEEATTFPDNSREFVEKLNEALRFATLNPVKVVAPLIDLDKRGIAK 180

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
           L +++  +       E S++CY  K          C  C +C  R KG +E
Sbjct: 181 LLKELNAK------YEYSNSCYNPKGFTEDGRPIHCGECESCVRRHKGLIE 225


>gi|86136123|ref|ZP_01054702.1| ExsB [Roseobacter sp. MED193]
 gi|85826997|gb|EAQ47193.1| ExsB [Roseobacter sp. MED193]
          Length = 233

 Score =  140 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 49/229 (21%), Positives = 79/229 (34%), Gaps = 21/229 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L++ SGG DS +      +       +SFDYGQR++ E+       K++         
Sbjct: 2   KTLVICSGGLDSVSLAHITANEHQLTRLVSFDYGQRHRKEIYFAEAAAKRLGVPFHLIDM 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     A L   + +          ++  +  T VP RN I L     +A   G  
Sbjct: 62  RGVG------ASLTGSALTDDIDVPDGHYEEETMRATVVPNRNAIMLSIGFGIAAAKGDE 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAI--ETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            +   V   D+  YPDCR    RA        L   + V +HTP +   K E  +     
Sbjct: 116 AVATAVHGGDHFIYPDCRPSFTRAFDAMQQAALDGYAEVRLHTPFVEHSKAEIVRQGAKH 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
                 +    ++ +CY G +         C  C  C  R++ +     
Sbjct: 176 ------DTPFAQTWSCYKGNK-------VHCGRCGTCVERREAFHLAGI 211


>gi|87123416|ref|ZP_01079267.1| ExsB [Synechococcus sp. RS9917]
 gi|86169136|gb|EAQ70392.1| ExsB [Synechococcus sp. RS9917]
          Length = 226

 Score =  140 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 73/239 (30%), Positives = 113/239 (47%), Gaps = 25/239 (10%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D I     A+ L SGG DS+T  + A++   RV  LSFDYGQR++ ELE    +   +
Sbjct: 1   MTDSI-----AIALLSGGLDSATAAALAIEAGQRVIGLSFDYGQRHRRELEAARHLANSL 55

Query: 61  VELMPKWKDSLGEDHI--LPLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLV 117
                     L E H   + LA  G  S +   + + ++ +Q   +P+T+VPGRN +F+ 
Sbjct: 56  G---------LEEHHTLAVNLASWGGSSLTDRRQELPIEGVQQGVIPSTYVPGRNTVFIA 106

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
              +LA   G   +V+GV   DYSGYPDCR D + A +T  NL   + +    P +W   
Sbjct: 107 IGLSLAETRGADQLVLGVNAVDYSGYPDCRPDYLAAFQTLANLSSRAGLEGRGPRLWAPL 166

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            E W   + +     + + +E++ +CY G           C  C +C +R +       
Sbjct: 167 VE-WSKQRIVEEALRLGVPIEQTWSCYSGG-------AVACGVCDSCRIRDEALRAAGR 217


>gi|304315237|ref|YP_003850384.1| transcriptional regulator [Methanothermobacter marburgensis str.
           Marburg]
 gi|302588696|gb|ADL59071.1| predicted transcriptional regulator [Methanothermobacter
           marburgensis str. Marburg]
          Length = 223

 Score =  139 bits (350), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 53/236 (22%), Positives = 91/236 (38%), Gaps = 34/236 (14%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKWK 68
           SA+ + S G DS+   +        +  L+FDYGQR   +E+E    + K +        
Sbjct: 3   SAISILSAGMDSAVATALLASE-YEIHALTFDYGQRSAAMEIEHARKLAKHLG------- 54

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQD---------NNLPNTFVPGRNIIFLVFA 119
               E   + L  LG +  S+LT    +                   +VPGRNI+F    
Sbjct: 55  ---IEHTTIELPWLGRLGGSALTAGGEIPSPADLDDREECLETARRVWVPGRNIVFTAIG 111

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            + A  L    +++G    +   +PD   + + A    + +G    V V  PL+ + K E
Sbjct: 112 VSFAEALDADAVIVGWDLEEAETFPDNSAEFLDAFNRLLGIGTLRGVEVRAPLIGMTKRE 171

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
             ++   +G      L  E +++CY G           C  C +C  R++ +    
Sbjct: 172 IVEVGSAVG------LPFELTYSCYSGGE-------VHCGVCESCMRRRRAFKLAG 214


>gi|294792739|ref|ZP_06757886.1| ExsB protein [Veillonella sp. 6_1_27]
 gi|294456638|gb|EFG25001.1| ExsB protein [Veillonella sp. 6_1_27]
          Length = 229

 Score =  139 bits (350), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 61/238 (25%), Positives = 95/238 (39%), Gaps = 18/238 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +   A++LFSGG DS+TCL+ A++RF  D V  LS  YGQ++  ELE  + + +    
Sbjct: 1   MAQKQKAVVLFSGGVDSTTCLALAIERFGKDNVVPLSIQYGQKHSKELEAAIAILEYYNM 60

Query: 63  LMPKWKD-SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                    L       L +         +       +     +T+VP RN +FL  AA+
Sbjct: 61  KGKTMDVTKLFAFSNCSLLVQSSEDIPQGSYKEQQDAEGKGTVSTYVPFRNGLFLSAAAS 120

Query: 122 LAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           LA  L    I  G    D +G  YPDC     +++  AI  G     ++  P +   K +
Sbjct: 121 LALSLDCGYIYYGAHSDDAAGNAYPDCTEHFYKSMGDAIFEGSGKECSLEAPFINANKAD 180

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
             K    +      N+    + +CY G           C  C  C  R K +     +
Sbjct: 181 IVKEGLRL------NVPYHLTWSCYEGGDKP-------CGHCGTCIDRAKAFHANGVE 225


>gi|21672728|ref|NP_660795.1| hypothetical protein BUsg463 [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25091577|sp|Q8K986|QUEC_BUCAP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|21623372|gb|AAM68006.1| hypothetical 25.5 kDa protein [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 232

 Score =  139 bits (350), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 74/233 (31%), Positives = 120/233 (51%), Gaps = 22/233 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              L++FSGGQDS+TCL    + +  +  ++FDY Q +K E++    +            
Sbjct: 2   KKILIIFSGGQDSTTCLIHYTNIYKEIYCITFDYNQLHKSEIDSARFISNYF-------- 53

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP----NTFVPGRNIIFLVFAATLAY 124
            ++ +   + L  L ++S SSLT      + ++ L     +TFVPGRNI+FL  ++  A+
Sbjct: 54  -NVKKHIFVDLKCLKNLSISSLTDEKISILDNHPLNFSLPSTFVPGRNILFLTLSSIYAF 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
              I +IV+GV E D+SGYPDCR+  ++ +   + +GM   +   +PL+ L K E W L+
Sbjct: 113 NHQINSIVLGVNEIDFSGYPDCRNAFLKKMNDVVQIGMNCKINFQSPLINLSKAEIWALS 172

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                 +    IL  + TCY G +      G GC  C +C LR  G+ ++K  
Sbjct: 173 DYW---NSTQFILNNTVTCYQGIQ------GKGCGQCQSCILRNDGFNKWKSN 216


>gi|282859128|ref|ZP_06268255.1| protein ExsB [Prevotella bivia JCVIHMP010]
 gi|282588083|gb|EFB93261.1| protein ExsB [Prevotella bivia JCVIHMP010]
          Length = 217

 Score =  139 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 56/232 (24%), Positives = 92/232 (39%), Gaps = 30/232 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMPKW 67
             ++++ SGG DS T L       +    +SFDYGQ +   EL       +K+       
Sbjct: 2   KDSVIIVSGGLDSVTLLYE--KADEIALAISFDYGQNHSKNELPLAAYHCEKLG------ 53

Query: 68  KDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                   ++PL  + +   SSL            ++NN+ +T VP RN I L  A  +A
Sbjct: 54  ----IRHIVIPLKFINEYFKSSLLDGGEAIPEGHYEENNMKSTVVPFRNGIMLSIATGIA 109

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
               +  ++I     D++ YPDCR   I+A+  A   G   +V V  P   + K E    
Sbjct: 110 ESHALKRVMIANHGGDHTIYPDCRPAFIQAMNGATATGTYINVQVEAPYTNITKAEIVHR 169

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
              +G      +   ++ +CY G           C  C  C  R++ + +  
Sbjct: 170 GAALG------IDYSKTWSCYKGGEK-------HCGKCGTCVERKEAFRDAG 208


>gi|21673367|ref|NP_661432.1| ExsB protein [Chlorobium tepidum TLS]
 gi|81791733|sp|Q8KF00|QUEC_CHLTE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|21646463|gb|AAM71774.1| exsB protein [Chlorobium tepidum TLS]
          Length = 227

 Score =  139 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 94/230 (40%), Gaps = 23/230 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWK 68
            A+LL SGG DS    + A      +  +  +YGQR  + ELEC   +      +     
Sbjct: 2   RAVLLVSGGMDSLVATALAHREGLELAAMHVNYGQRTWQKELECFRQICVHYGIVDRLEV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNV-AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           D++       L+ +G  S +  T  V    +   ++P ++VP RN  FL  A + +  +G
Sbjct: 62  DAMF------LSAIGGSSLTDATIPVGPADLAGTDIPTSYVPFRNANFLSMAVSWSEVIG 115

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKLAQ 185
              I IG  E D SGYPDCR     A    I  G      + + TPL+ + K E  +   
Sbjct: 116 ANRIYIGAVEEDSSGYPDCRKVFYDAFNQVIEHGTRPETRIEIVTPLIAMSKAEIVRRGM 175

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           ++      +     S +CY  +       G  C  C +C  R + +    
Sbjct: 176 EL------DAPFHFSWSCYKSE-------GKACGVCDSCARRLRAFASVG 212


>gi|291547691|emb|CBL20799.1| preQ(0) biosynthesis protein QueC [Ruminococcus sp. SR1/5]
          Length = 227

 Score =  139 bits (349), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 62/237 (26%), Positives = 95/237 (40%), Gaps = 26/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            AL+L SGG DS+TCL  A++++  + V  L+  YGQ++  E+E      +         
Sbjct: 2   KALVLASGGVDSTTCLGLAVNKYGKENVIALTVAYGQKHTKEIEAARKTAEYY----EVE 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQ-----DNNLPNTFVPGRNIIFLVFAATL 122
              L  + I   +    + HS          +     D +  +T+VP RN +FL  AA++
Sbjct: 58  HLYLDLEPIFRYSDCSLLKHSDREIPHESYAEQLKETDGSPVSTYVPFRNGLFLSSAASI 117

Query: 123 AYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           A     + I  G    D +G  YPDC      AI  AI  G    + V  P +   K E 
Sbjct: 118 ALSKNCSVIYYGAHADDAAGNAYPDCSSAFHNAINEAIYQGSGGQLKVEAPFVSCTKAEV 177

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            K   ++      N+  E + +CY G           C  C  C  R + +     K
Sbjct: 178 VKTGLEL------NVPYELTWSCYEGGEKP-------CGVCGTCIDRAEAFRLNGVK 221


>gi|307565167|ref|ZP_07627671.1| protein ExsB [Prevotella amnii CRIS 21A-A]
 gi|307346125|gb|EFN91458.1| protein ExsB [Prevotella amnii CRIS 21A-A]
          Length = 234

 Score =  139 bits (349), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 59/234 (25%), Positives = 94/234 (40%), Gaps = 30/234 (12%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELM 64
           K   +++++ SGG DS T L       D    +SFDYGQ +   EL       KK+    
Sbjct: 16  KSMRNSVIIVSGGLDSITLLYE--KADDIALAISFDYGQNHSKNELPLAEYHCKKLG--- 70

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                       +PL  +     SSL +          ++ N+ +T VP RN I L  A 
Sbjct: 71  -------IPHITIPLKFMNVYLKSSLLEGSEAIPEGHYEEENMKSTVVPFRNGIMLSIAI 123

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            +A    +  ++I     D++ YPDCR + I A+  A   G   +V V  P   + K E 
Sbjct: 124 GIAESHNLKYVMIANHGGDHTIYPDCRPEFISAMNKAACAGTYINVKVVAPYTNISKTEI 183

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            K    +G      +   ++ +CY G           C  C  C  R++ +++ 
Sbjct: 184 VKRGVALG------IDYNKTWSCYKGGEK-------HCGKCGTCVERKEAFLKA 224


>gi|328953828|ref|YP_004371162.1| exsB protein [Desulfobacca acetoxidans DSM 11109]
 gi|328454152|gb|AEB09981.1| exsB protein [Desulfobacca acetoxidans DSM 11109]
          Length = 227

 Score =  139 bits (349), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 62/236 (26%), Positives = 99/236 (41%), Gaps = 22/236 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +     A++L SGG DS    + A  +   +     +YGQR    +   L   +++    
Sbjct: 1   MSDRKLAVVLLSGGLDSCVTAAVA-GQDYDLALFHGNYGQRT---VRRELQAFRELAVFF 56

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD-NNLPNTFVPGRNIIFLVFAATLA 123
                 L E ++  L  +G  S +  +  +     +   LP+T+VP RN I +      A
Sbjct: 57  R--CRHLLEANLDYLGAIGGSSLTDASLAIPQTDTESEELPSTYVPFRNTILIAAVVAWA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETW 181
             +G + + IG    D   YPDCR D   A    I LG     H+ +HTPL+ L K +  
Sbjct: 115 EVIGASAVFIGANIIDGPDYPDCRPDYFNAYNRLIELGTRPGTHIRIHTPLIHLDKADII 174

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +L   +       + LE + +CY  +          C  CP+C +R KG+ E   K
Sbjct: 175 RLGLKL------QVPLELTWSCYRNED-------RACGCCPSCRIRLKGFAEVGIK 217


>gi|325270155|ref|ZP_08136762.1| transcription regulator ExsB [Prevotella multiformis DSM 16608]
 gi|324987456|gb|EGC19432.1| transcription regulator ExsB [Prevotella multiformis DSM 16608]
          Length = 218

 Score =  139 bits (349), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 56/234 (23%), Positives = 91/234 (38%), Gaps = 30/234 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKW 67
             ++++ SGG DS T L    +       +SFDYGQ +   EL        K+       
Sbjct: 2   KDSVIIVSGGLDSVTLLYDKAEE--IALAISFDYGQNHGARELPFAEYHCTKLG------ 53

Query: 68  KDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    +PL+ +     SSL             + N+ +T VP RN I L  A  +A
Sbjct: 54  ----IPHITIPLSFMHRYFKSSLLDGAEAIPEGHYAEENMKSTVVPFRNGIMLAIATGIA 109

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              G+  + I     D++ YPDCR D IRA++ A   G   +V +  P   + K +  + 
Sbjct: 110 ESHGLKRVYIANHGGDHTIYPDCRPDFIRAMDGAATAGTFVNVRIEAPYTNITKADIVRR 169

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
              +      ++   ++ +CY G           C  C  C  R++ + E    
Sbjct: 170 GTAL------DIDYSKTWSCYKGAD-------LHCGKCGTCVERKEAFQEAGVN 210


>gi|225572382|ref|ZP_03781246.1| hypothetical protein RUMHYD_00676 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040149|gb|EEG50395.1| hypothetical protein RUMHYD_00676 [Blautia hydrogenotrophica DSM
           10507]
          Length = 231

 Score =  139 bits (349), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 57/235 (24%), Positives = 95/235 (40%), Gaps = 26/235 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
            +  A++LFSGG DS+TCL  A++++    V  LS  YGQ+++ E+E    + +      
Sbjct: 1   MSEKAMVLFSGGVDSTTCLGLAIEKYGVQNVIPLSVQYGQKHEKEVEAARRILEYYG--- 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ-----DNNLPNTFVPGRNIIFLVFA 119
                 L    I   +    +SHS      A   +     +    +T+VP RN +FL  A
Sbjct: 58  -IEGMELDLTPIFAYSDCSLLSHSEKEIPEASYAEQLRENEGVPVSTYVPFRNGLFLACA 116

Query: 120 ATLAYRLGITNIVIGVCETD--YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
           A++A     + I  G    D   S YPDC      ++  A+  G    + +  P + + K
Sbjct: 117 ASIALSRECSCIYYGAHRDDAAGSAYPDCSESFFESMNRAVYEGSGQQIRIEAPFIKMNK 176

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
            +       +       +  E + +CY GK          C  C  C  R + + 
Sbjct: 177 AQIVAEGLRL------KVPYEFTWSCYEGKEKP-------CGVCGTCIDRSEAFK 218


>gi|167628631|ref|YP_001679130.1| exsb protein, putative [Heliobacterium modesticaldum Ice1]
 gi|167591371|gb|ABZ83119.1| exsb protein, putative [Heliobacterium modesticaldum Ice1]
          Length = 247

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 73/247 (29%), Positives = 117/247 (47%), Gaps = 31/247 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR------KKIV 61
              A+++ SGG DS+TC++ A  R + +  L+F Y QR+  E+E    V        +I+
Sbjct: 5   RERAVVILSGGLDSTTCMALADCRGEDIFALTFAYNQRHIREIEAAQAVACHYGAHHQII 64

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL-------PNTFVPGRNII 114
           +L   +  S      +   +   +  S++ K  AM   + N        P T+VP RNI+
Sbjct: 65  DLGAVFAASALTSTEIRPEVAAPLGGSAVAKMEAMGCAEKNPVAIATAIPATYVPARNIL 124

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVH 169
           FL +A + A ++G   I  GV   D  GYPDCR + I A +  I++G +       V V 
Sbjct: 125 FLAYALSFAEKVGARRIYTGVNALDNPGYPDCRPEFIAAFQRMIDVGTKAGTEGRSVEVF 184

Query: 170 TPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
           TPL+ + K +  +LA D+      +  L  + TCY G+R         C  C +C LR +
Sbjct: 185 TPLIEMNKADIIRLALDL------DAPLHLTLTCYYGERP-------ACGECNSCRLRLE 231

Query: 230 GWMEFKE 236
           G+    +
Sbjct: 232 GFRLLGK 238


>gi|260593106|ref|ZP_05858564.1| ExsB protein [Prevotella veroralis F0319]
 gi|260534992|gb|EEX17609.1| ExsB protein [Prevotella veroralis F0319]
          Length = 217

 Score =  138 bits (348), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 30/234 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKW 67
             ++++ SGG DS T L    +       +SFDYGQ + K EL       +K+       
Sbjct: 2   KDSVIIVSGGLDSITLLYDKAET--IALAISFDYGQNHGKKELPYAEYHCQKLG------ 53

Query: 68  KDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    +PL  +     SSL +          ++ N+ +T VP RN I L  A  +A
Sbjct: 54  ----IPHITIPLTFMHQYFKSSLLEGAEAIPEGHYEEENMKSTVVPFRNGIMLAIATGIA 109

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
               +  + I     D++ YPDCR + I A++ A + G    V V  P   + K +  + 
Sbjct: 110 ESHELKRVYIANHGGDHTIYPDCRPEFIDAMDKATSAGTFVDVRVEAPYTNISKADIVRR 169

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
              +G      +   ++ +CY G           C  C  C  R++ + +   +
Sbjct: 170 GTALG------IDYAKTWSCYKGSE-------IHCGKCGTCVERKEAFADAGVE 210


>gi|33864486|ref|NP_896046.1| ATPase [Prochlorococcus marinus str. MIT 9313]
 gi|81576635|sp|Q7V3W6|QUEC_PROMM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|33641266|emb|CAE22396.1| hypothetical ATPase [Prochlorococcus marinus str. MIT 9313]
          Length = 229

 Score =  138 bits (348), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 70/244 (28%), Positives = 116/244 (47%), Gaps = 32/244 (13%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+ +I    + + L SGG DS+T  + A++   +V  LSFDYGQR++ EL+    +   +
Sbjct: 1   MSSMIHS--TTIALLSGGLDSATAAALAVEAGQKVIGLSFDYGQRHRKELQAADALAAHM 58

Query: 61  VELMPKWKDSLGEDHIL--PLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLV 117
                     L E H++   L   G  S + LT+ V    + D  +PNT+VPGRN +F+ 
Sbjct: 59  G---------LSEHHVISVNLGSWGGSSLTDLTQTVPSEGVVDGVIPNTYVPGRNTVFIA 109

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPL 172
              +LA       +V+G+   DYSGYPDCR D +RA ++  +L  +       + +  PL
Sbjct: 110 IGLSLAEARNANQLVLGINAMDYSGYPDCRPDYLRAYQSLADLANKAGREGHGIKLWAPL 169

Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
           +   K +  + A  +G      + ++++ +CY G           C  C +C +R     
Sbjct: 170 IDWNKKQIVQEALRLG------VPIDKTWSCYSGGDH-------ACGICDSCRIRDAALS 216

Query: 233 EFKE 236
           E   
Sbjct: 217 EAGR 220


>gi|189499746|ref|YP_001959216.1| exsB protein [Chlorobium phaeobacteroides BS1]
 gi|254764321|sp|B3ENV8|QUEC_CHLPB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|189495187|gb|ACE03735.1| exsB protein [Chlorobium phaeobacteroides BS1]
          Length = 226

 Score =  138 bits (348), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 90/226 (39%), Gaps = 21/226 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR-LCVRKKIVELMPKWK 68
            A++L SGG DS    + A      +  +  +YGQR   +       +            
Sbjct: 2   RAVVLISGGMDSLVVAAQARALGYELAAMHVNYGQRTWQKELTAFRRICSHYAIERKLEV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D+   +HI      G     S        +Q   +P+++VP RN  FL  A + +  +G 
Sbjct: 62  DAAYLEHI-----GGSSLTDSSIPVEQADLQTVAIPSSYVPFRNASFLSMAVSWSEVIGA 116

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKLAQD 186
             I IG  E D SGYPDCR     A    I LG +    + + TPL+ L+K E  +   +
Sbjct: 117 ERIFIGAVEEDSSGYPDCRKIFYDAFNKVIELGTKPETTIEIRTPLIDLQKSEIVRKGVE 176

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
           +      ++    S +CY  +       G  C  C +C  R + + 
Sbjct: 177 L------DVPFFHSWSCYKSE-------GKACGLCDSCARRLRAFQ 209


>gi|78186427|ref|YP_374470.1| ExsB [Chlorobium luteolum DSM 273]
 gi|110816240|sp|Q3B5F4|QUEC_PELLD RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|78166329|gb|ABB23427.1| ExsB [Chlorobium luteolum DSM 273]
          Length = 227

 Score =  138 bits (348), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 29/230 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWK 68
            A+LL SGG DS    + A      +  +  +YGQR  + EL+    +            
Sbjct: 2   KAVLLLSGGMDSLVTTAIAHREGYELAAMHVNYGQRTWQKELQSFRSIADHY-------- 53

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVA----MKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            S+ E   +    LG I  SSLT +        ++ + +P ++VP RN  FL  A + + 
Sbjct: 54  -SITERLEVNADFLGRIGGSSLTDHSMPVAGADLRGSGIPTSYVPFRNACFLSMAVSWSE 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWK 182
            +G   + IG  E D SGYPDCR     A    I LG      +T+ TPL+ ++K +  +
Sbjct: 113 VIGAERLFIGAVEEDSSGYPDCRRVFYDAFNRVIELGTRPETGITILTPLIAMQKAQIVR 172

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
              ++G         E S +CY  +       G  C  C +C  R + + 
Sbjct: 173 NGMELGA------PFEHSWSCYRSE-------GRACGVCDSCARRLRAFE 209


>gi|330835407|ref|YP_004410135.1| exsB protein [Metallosphaera cuprina Ar-4]
 gi|329567546|gb|AEB95651.1| exsB protein [Metallosphaera cuprina Ar-4]
          Length = 462

 Score =  138 bits (347), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 54/241 (22%), Positives = 88/241 (36%), Gaps = 22/241 (9%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K    AL++ SGG DS+   +  +    +V  L F+Y   +    E      +KI   + 
Sbjct: 238 KPKRRALVIASGGLDSTVAATKMVKDGYQVTLLHFNY---HHKAEEREREATRKIASYLN 294

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                +  D    +     +             +     + +VP RN IF   A  +A  
Sbjct: 295 VDLIEVNTDVFTLIGESPLLKAGGEIVKERKGEEGAEFAHEWVPARNSIFFTVAMAIAEA 354

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIET--AINLGMESHVTVHTPLMWLKKYETWKL 183
            G   +V G+   +   YPD   + +R  +      +G    V +  P+  L K+E  KL
Sbjct: 355 RGYDTLVSGINLEEAGAYPDNEMEFVRMFQRLSPYAVGPNKRVDIVMPVGNLVKHEIVKL 414

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM----EFKEKYQ 239
             DIG        L  + +CY G           C  C  CY+R+  +     +   +YQ
Sbjct: 415 GLDIGA------PLHLTWSCYEGGEK-------HCGRCGPCYMRKTAFEINGVKDPIEYQ 461

Query: 240 D 240
           D
Sbjct: 462 D 462


>gi|116074186|ref|ZP_01471448.1| ExsB [Synechococcus sp. RS9916]
 gi|116069491|gb|EAU75243.1| ExsB [Synechococcus sp. RS9916]
          Length = 228

 Score =  138 bits (347), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 69/237 (29%), Positives = 109/237 (45%), Gaps = 21/237 (8%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +      +A+ L SGG DS+T  + AL+   RV  LSFDYGQR++ EL+    +   +  
Sbjct: 1   MPSMTDSTAIALLSGGLDSATAAALALEAGHRVIGLSFDYGQRHRRELDAAAALANTLG- 59

Query: 63  LMPKWKDSLGEDHIL--PLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFA 119
                   L E H +   LA  G  S +   + +    +++  +P+T+VPGRN +F+   
Sbjct: 60  --------LAEHHTIAVNLASWGGSSLTDTQQEIPTDGVEEGVIPSTYVPGRNTVFISIG 111

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            +LA   G   IV+GV   DYSGYPDCR D + A +T  +L  +     H P +W     
Sbjct: 112 LSLAEARGADRIVLGVNAVDYSGYPDCRPDYLAAFQTLADLSSKVGREGHGPQLWAPLV- 170

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           TW     +     + + ++++ +CY G           C  C +C +R         
Sbjct: 171 TWSKQTIVEEALRLQVPIDQTWSCYSGGAQP-------CGVCDSCRIRDDALRAAGR 220


>gi|212224412|ref|YP_002307648.1| Hypothetical transcription regulator [Thermococcus onnurineus NA1]
 gi|212009369|gb|ACJ16751.1| Hypothetical transcription regulator [Thermococcus onnurineus NA1]
          Length = 239

 Score =  138 bits (347), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 10/230 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMPKW 67
             A++LFSGG DS+ CL WA   +D V  L+ +YG   +           K++   +   
Sbjct: 2   KRAVVLFSGGLDSTACLYWAKRNYDEVIMLTVNYGSNEEKVTNRVAEFFSKELDVPLKIV 61

Query: 68  K-DSLGEDHILPLAIL--GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
           + D L E   L    L  G+    +  +   M +      + +VP RN++ +  AA+L  
Sbjct: 62  RLDFLEEFSKLRGTTLVGGETPKVTAEELEDMGVAQETAKSVWVPARNVVLISVAASLLD 121

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            LG  +I++G    + + +PD   + +  +   +  G  + V V  PL+ L K    +L 
Sbjct: 122 ALGGGDIIVGFNAEEGATFPDNTPEFVERMNEMLKYGAMAEVRVVAPLIDLDKKGIAELL 181

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           +++  +       E S++CY+ K          C  C +C  R +G ME 
Sbjct: 182 KELDAK------YEYSNSCYMPKGFTEDGKPIHCGECESCVRRHRGLMEA 225


>gi|118574280|sp|Q1IHK6|QUEC_ACIBL RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
          Length = 237

 Score =  138 bits (347), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 97/230 (42%), Gaps = 19/230 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            A+++ SGG DS+ C + A+  +  + +  L   YGQR     +        + E +   
Sbjct: 10  KAVVVLSGGMDSTVCATLAVREYGAENIGALHVSYGQRTAAREKQAFAA---VAERLGIQ 66

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                E           ++ +++    A ++  + +P T+VP RN   L  A + A  LG
Sbjct: 67  TRLAVETPFFRAIGGSALTDANIAVPDAGELIGHEIPVTYVPFRNAHLLAMAVSWAEVLG 126

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-HVTVHTPLMWLKKYETWKLAQD 186
            + I IG    D SGYPDCR +   A   A+  G ++  + V TPL+ L+K+E   L  +
Sbjct: 127 ASKIYIGAVAQDSSGYPDCRPEFYEAYNLAVRRGTKAGDIEVVTPLIALRKHEIVSLGLE 186

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           +G         + + +CY             C  C +C LR + +     
Sbjct: 187 LGA------PFDLTWSCY-------SREDCACGVCDSCVLRLRAFEGAGA 223


>gi|294675227|ref|YP_003575843.1| protein ExsB [Prevotella ruminicola 23]
 gi|294471644|gb|ADE81033.1| protein ExsB [Prevotella ruminicola 23]
          Length = 217

 Score =  138 bits (347), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 50/241 (20%), Positives = 96/241 (39%), Gaps = 34/241 (14%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKW 67
             ++++ SGG DS+T L    +R      +SFDYG  +   E+       +++       
Sbjct: 2   KDSIIILSGGMDSTTLLYDYQER--IALAISFDYGSNHNAKEIPFAKYHCEQLG------ 53

Query: 68  KDSLGEDHILPLAILGDISHSS----LTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                +  ++PL  +G+   SS                N+ +T VP RN I L  A  +A
Sbjct: 54  ----IKHLVIPLKFMGEYFRSSLLSGDEAIPEGHYASENMKSTVVPFRNGIMLAVATGMA 109

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
               +  +++     D++ YPDCR + + A +     G  + V + +P   + K +    
Sbjct: 110 ESNDLQYVMMANHGGDHTIYPDCRPEFVDAFDKTAQAGTFNGVRLLSPYCNMTKGQIAAR 169

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQ 239
            +++G      +   ++ +CY G           C  C  C  R++   +       +Y+
Sbjct: 170 GKELG------IDYSKTWSCYRGGDK-------HCGKCGTCVERKEALADAGIDDPTEYE 216

Query: 240 D 240
           D
Sbjct: 217 D 217


>gi|119386890|ref|YP_917945.1| exsB protein [Paracoccus denitrificans PD1222]
 gi|167016441|sp|A1B9Q5|QUEC_PARDP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|119377485|gb|ABL72249.1| exsB protein [Paracoccus denitrificans PD1222]
          Length = 233

 Score =  138 bits (347), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 85/241 (35%), Gaps = 33/241 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +++ SGG DS +       +      +SFDYGQR++ EL+      +++         
Sbjct: 2   KTIVVCSGGLDSVSLAHMVAAQGGLTRLISFDYGQRHRKELDYAALAARRLG-------- 53

Query: 70  SLGEDHILPLAI----LGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                H++ +      L   + +   +       +  +  T VP RN I L  A  +A  
Sbjct: 54  --VPHHVIDMRGVGAVLTGSALTGGAEVPDGHYAEETMRITVVPNRNAIMLTVAFGMAAA 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG--MESHVTVHTPLMWLKKYETWKL 183
           +G   +   V   D+  YPDCR    +A +   +      +   + TP +   K +    
Sbjct: 112 MGDQAVATAVHGGDHFIYPDCRPAFTQAFQQMQDAALDGYAQARLLTPFVHRTKADIVTE 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQ 239
                     +    E+ +CY G           C  C  C  R++ +          Y+
Sbjct: 172 GARH------DTPFAETWSCYKGG-------ALHCGRCGTCVERREAFHLAGIPDPTAYE 218

Query: 240 D 240
           D
Sbjct: 219 D 219


>gi|297561372|ref|YP_003680346.1| exsB protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
 gi|296845820|gb|ADH67840.1| exsB protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
          Length = 243

 Score =  138 bits (346), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 94/237 (39%), Gaps = 24/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           + +++FSGG DS+T L+       R+  ++ +YGQR+  E++    + +           
Sbjct: 17  TVVVVFSGGMDSTTLLAHFAALRFRLVAVTVEYGQRHGKEVDAARAIARHYGAEHHILGI 76

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +     +      G     +  +       + ++ +T VP RN +    AA++A      
Sbjct: 77  AGFGPLL-----RGSALTDARVEVPDGHYAEESMRDTVVPNRNAVLANLAASVAVARRAG 131

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWKLAQDI 187
            + +G+   D+  YPDCR   + A+   + +     +   V  P M   K +  +    +
Sbjct: 132 TVALGMHSGDHFVYPDCRPAFVDALRHLVGVANEGFAAPRVEAPFMAWSKADIARHGVRL 191

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQD 240
           G        LE S +CY G           C +C  CY R++ + E       +Y D
Sbjct: 192 GA------PLEHSWSCYKGGD-------IHCGTCGTCYERREAFQEAGLPDPTEYLD 235


>gi|227820050|ref|YP_002824021.1| succinoglycan biosynthesis regulator [Sinorhizobium fredii NGR234]
 gi|75440536|sp|Q6W2G5|QUEC_RHISN RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|36958584|gb|AAQ87052.1| Succinoglycan biosynthesis regulator, ExsB [Sinorhizobium fredii
           NGR234]
 gi|227339049|gb|ACP23268.1| succinoglycan biosynthesis regulator [Sinorhizobium fredii NGR234]
          Length = 236

 Score =  138 bits (346), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 83/237 (35%), Gaps = 25/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +++ SGG DS +         + +  LSFDYGQR++ EL+      K++         
Sbjct: 2   KTIVICSGGLDSVSLAHRIAAEHELLGLLSFDYGQRHRKELDFAAACAKRLGVPHQIIDI 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                H      L   + +           +  +  T VP RN I L  A  +A      
Sbjct: 62  REIGRH------LTGSALTDDVDVPDGHYAEETMKTTVVPNRNAIMLAIAFGVAATRKAD 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            +   V   D+  YPDCR   I A +      L   + V ++TP + + K +        
Sbjct: 116 AVAAAVHGGDHFIYPDCRPGFIDAFQVMQNHALEGYADVILYTPYVNVSKADIVADGAKH 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQD 240
                      E+ +CY G           C  C  C  R++ +         +Y+D
Sbjct: 176 HT------PFAETWSCYKGG-------TRHCGRCGTCVERREAFHLAGVTDPTEYED 219


>gi|149197765|ref|ZP_01874814.1| exsB protein [Lentisphaera araneosa HTCC2155]
 gi|149138986|gb|EDM27390.1| exsB protein [Lentisphaera araneosa HTCC2155]
          Length = 226

 Score =  138 bits (346), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 61/239 (25%), Positives = 94/239 (39%), Gaps = 32/239 (13%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             A +L SGG DS+T L   +    +D V  LSFDYGQ++  EL         + E    
Sbjct: 2   KKAAVLISGGLDSTTLLHHVIKSLGYDEVYALSFDYGQKHSRELIVAKAQCDSLPE---- 57

Query: 67  WKDSLGEDHILPLAILGDISHSSL---------TKNVAMKIQDNNLPNTFVPGRNIIFLV 117
               + E ++L ++ +GD   SS               +   D + P T+VP RN++ L 
Sbjct: 58  ----VKEHNVLDISYMGDFLGSSSALVKGGVEVPDLKDIAEGDLDQPVTYVPNRNMMLLS 113

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
            AA+ A       +  G    D  GY DC    +  +    +L   + V V  P + + K
Sbjct: 114 IAASFAESRDCRQLYYGAQAQDEYGYWDCTESFLARMNDVFSLNRRTGVHVEAPFVNMSK 173

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
               K+   +G      +   ++ TCY G           C  CP+C  R   + E   
Sbjct: 174 GHVAKIGLALG------IDYAQTWTCYRGGDKP-------CEVCPSCVERALAFKECGI 219


>gi|110816248|sp|O57836|QUEC_PYRHO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
          Length = 239

 Score =  138 bits (346), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 10/229 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMPKW 67
              ++LFSGG DS+ CL WA   +D V  L+ +YG R +    +      K++   +   
Sbjct: 2   KRGVVLFSGGLDSTACLYWAKRHYDEVIMLTINYGSREESVMNKVAEFFSKELKIPLKII 61

Query: 68  K-DSLGEDHILPLAIL--GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
           + + L E   L  + L  G++   S ++   ++       + +VP RN++ +  AA+L  
Sbjct: 62  RVNFLNEFSKLSGSALVEGNVPRVSASELEVIERAKETARSVWVPARNLVLISIAASLLD 121

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            LG  +I++G  + +   +PD   + +  +  A+     + V V  PL+ L K    +L 
Sbjct: 122 ALGGGDIIVGFNKEEGETFPDNTKEFVERVNKALEYATMNKVRVVAPLIELDKRGIARLL 181

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
           +++G +       E S++CY  K          C  C +C  R +G ME
Sbjct: 182 KELGAK------YEYSNSCYDPKGFTEDGKPIHCGRCESCVRRHRGLME 224


>gi|224419252|ref|ZP_03657258.1| exsB protein [Helicobacter canadensis MIT 98-5491]
 gi|253826968|ref|ZP_04869853.1| transcription regulator related protein ExsB [Helicobacter
           canadensis MIT 98-5491]
 gi|313142755|ref|ZP_07804948.1| ExsB [Helicobacter canadensis MIT 98-5491]
 gi|253510374|gb|EES89033.1| transcription regulator related protein ExsB [Helicobacter
           canadensis MIT 98-5491]
 gi|313131786|gb|EFR49403.1| ExsB [Helicobacter canadensis MIT 98-5491]
          Length = 223

 Score =  138 bits (346), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 88/230 (38%), Gaps = 17/230 (7%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L SGG DS   ++ A+     V  L  +YGQR +               +  K  
Sbjct: 2   DKAIVLASGGLDSCVSVACAIKDGYEVCLLHINYGQRTQKRENQAFNDIANYYGIQNKLI 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             +     +  + L  +  S   +   +      +P T+VP RN   +  A + A  +G 
Sbjct: 62  VDIDYLRQIGGSSL--VDSSIPIEQETIPSSTGQIPMTYVPFRNANMISIAVSWAEVIGA 119

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLG--MESHVTVHTPLMWLKKYETWKLAQD 186
             I +G  E D SGYPDC           + +    +++V + TPL+ L K E       
Sbjct: 120 KKIYVGAVEEDSSGYPDCMEIFYEKFNELLKVALLPQNNVEILTPLIHLNKAEIVHQGI- 178

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
                L+   L  + +CY  +          C  C +C LR +G+    E
Sbjct: 179 -----LLKAPLHLTWSCYQNEDK-------ACGVCESCKLRLRGFKLAGE 216


>gi|188994962|ref|YP_001929214.1| probable succinoglycan biosynthesis regulator ExsB protein
           [Porphyromonas gingivalis ATCC 33277]
 gi|254764365|sp|B2RJS2|QUEC_PORG3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|188594642|dbj|BAG33617.1| probable succinoglycan biosynthesis regulator ExsB protein
           [Porphyromonas gingivalis ATCC 33277]
          Length = 220

 Score =  138 bits (346), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 60/237 (25%), Positives = 97/237 (40%), Gaps = 30/237 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVEL 63
           +++   +L++ SGG DS T +     R      LSFDYG ++   EL       +++   
Sbjct: 1   MQREKDSLIVVSGGMDSVTLMYE--KRASIALALSFDYGSKHNARELSFARLHAERLG-- 56

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLT----KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                    E  I+PL  +G    S L          +  + N+ +T VP RN I L  A
Sbjct: 57  --------VEHLIIPLDFIGQYFQSDLLLSGGDIPEGRYDEENMKSTVVPFRNGIMLAVA 108

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           A LA   G+  I I     D++ YPDCR   IR +  A+  G  + V +  P   + K +
Sbjct: 109 AGLAESRGLRRIYIANHFGDHAIYPDCRASFIRPMTEAVRCGTTNGVLIEAPYTDITKTD 168

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
             ++   +G      +   E+ +CY G         + C  C  C  R++   +   
Sbjct: 169 IARIGASLG------IDYAETWSCYKGGV-------FHCGVCGTCVERKEALHDAGI 212


>gi|118574283|sp|Q3AR02|QUEC_CHLCH RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
          Length = 228

 Score =  137 bits (345), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 64/233 (27%), Positives = 96/233 (41%), Gaps = 29/233 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+LL SGG DS    + A      +  +  +YGQR           ++++         
Sbjct: 2   KAILLLSGGMDSLVTTAIAQQAGFELAAMHVNYGQRTM---------QRELNSFRAICSH 52

Query: 70  SLGEDHI-LPLAILGDISHSSLTK----NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +  + +    LG I  SSLT          ++ + +P ++VP RN  FL  A + A 
Sbjct: 53  YSIQQRLEINADFLGKIGGSSLTDLSMPVSVANLESHAIPASYVPFRNAGFLSMAVSWAE 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWK 182
            +G   I IG  E D SGYPDCR     A    I LG +   H+ V TPL+ LKK+E  +
Sbjct: 113 VIGAERIFIGAVEEDSSGYPDCRKIFYEAFNRVIELGTKPETHIEVVTPLIALKKWEIVR 172

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
              ++            S +CY          G  C  C +C LR + + +  
Sbjct: 173 KGIELHA------PFAFSWSCYK-------NEGQACGVCDSCALRLRAFEQAG 212


>gi|257386659|ref|YP_003176432.1| exsB protein [Halomicrobium mukohataei DSM 12286]
 gi|257168966|gb|ACV46725.1| exsB protein [Halomicrobium mukohataei DSM 12286]
          Length = 271

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 56/233 (24%), Positives = 91/233 (39%), Gaps = 20/233 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDR-VETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           A SA++L SGG DS+T    A+DR    +  L   YGQ      E      + + + +  
Sbjct: 43  ADSAVILASGGMDSATAAYEAVDRGYEALYLLHTSYGQ---ATEETERACAQALADHVDA 99

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 E   L       ++   +  + A    D     ++VP RN   L  A + A   
Sbjct: 100 ADFLHVETGHLAQIGASSLTDEEMAVDDADLDSDEIP-TSYVPFRNANLLSMAVSYAEAN 158

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH--TPLMWLKKYETWKLA 184
             + I IG    D+SGYPDCR     A +  I+ G +    +    P +   K +  +  
Sbjct: 159 DCSAIFIGAHSEDFSGYPDCRPQFFDAFQQVIDAGTKPETEIELVAPFVEWSKTDIAERG 218

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            ++G      +  E++ +CY        E    C +C AC  R + +    E+
Sbjct: 219 LELG------VPYEDTWSCYR-------ESPPACGTCDACAFRLQAFQNLGER 258


>gi|284161581|ref|YP_003400204.1| exsB protein [Archaeoglobus profundus DSM 5631]
 gi|284011578|gb|ADB57531.1| exsB protein [Archaeoglobus profundus DSM 5631]
          Length = 233

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 16/224 (7%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSST L + + R+D +  +++ YGQR+  E+E    + +K  E      +     
Sbjct: 1   MSGGIDSSTLLWYLMKRYDEIYVITYIYGQRHAREVEHAKMIVEKAREKAKIHHEIADIS 60

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
            I  L   G +  +   +       D +   T VP RN+I L  A   A ++G   +   
Sbjct: 61  CIQRLIAKGAL--TGNEEVPEGFYTDESQKKTIVPNRNMILLAIAVGYAVKVGEREVYYA 118

Query: 135 VCETDYSGYPDCRHDTIRAIETAINLG-MESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
             ++DY+ YPDCR + ++A++TA+ L  +   V +  P + + K +  KL   +G     
Sbjct: 119 AHKSDYATYPDCRKEFVKALDTAVYLATIFDPVVIKAPFVDMTKADIVKLGLKLG----- 173

Query: 194 NLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            +  E + +CY G+          C  C  C  R + ++    K
Sbjct: 174 -VPYELTWSCYRGEERP-------CLRCGTCLERTEAFLINGVK 209


>gi|257064933|ref|YP_003144605.1| exsB protein [Slackia heliotrinireducens DSM 20476]
 gi|256792586|gb|ACV23256.1| exsB protein [Slackia heliotrinireducens DSM 20476]
          Length = 235

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 56/237 (23%), Positives = 88/237 (37%), Gaps = 21/237 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +   A++L SGG DS+TCL+ A ++F  D V ++S  YGQR+  EL C   V K      
Sbjct: 6   QPTRAMVLSSGGVDSTTCLALACEQFGADNVTSVSVFYGQRHNKELACADAVAKHYGVAH 65

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                +    +     +               +   ++ + NT+VP RN + L     LA
Sbjct: 66  HVLDLANILANSNNALMADSTQEIDHRDYATQIAENEDGMVNTYVPFRNGLMLSAVTALA 125

Query: 124 YRLG-----ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             L         +     +     YPDC  +   AI  AI LG      +  P + + K 
Sbjct: 126 ISLNPTEKTAIYLGAHADDAAGGAYPDCTPEFFEAIARAIELGSYGKAVLREPFVNVNKA 185

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           +       +G      +  E + +CY G           C +C  C  R K +    
Sbjct: 186 DVVACGLKLG------VPYELTWSCYEGGDAP-------CGTCATCIDRAKAFAANG 229


>gi|307595994|ref|YP_003902311.1| Queuosine synthesis [Vulcanisaeta distributa DSM 14429]
 gi|307551195|gb|ADN51260.1| Queuosine synthesis [Vulcanisaeta distributa DSM 14429]
          Length = 235

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 54/235 (22%), Positives = 84/235 (35%), Gaps = 28/235 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A+LL SGG DS+  L     R   V  LS +Y  R + E E    + +        
Sbjct: 1   MKKKAILLLSGGIDSAVALYLLKSRGYDVIALSINYPGRGERERESARELAR-------- 52

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +  +   + L  + ++       +       N  P+  +P RN I    AA  A   
Sbjct: 53  --LTNTKLIEVDLPFMREVDELWNNDDERPSHLRNAHPS-TIPARNAIIYAVAAYYAEVF 109

Query: 127 GITNIVIGVCETDYSGYPD----CRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           GI  IV G    D   +PD     R    RA+     +G    + V  PL  L K +  +
Sbjct: 110 GIDTIVAGHNADDTKYFPDTSREFRRFISRALTIGTYIGRARGLRVIAPLSGLSKTDVVR 169

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           L   +G      +  E + +C+         +   C  C  C  R++ + E   K
Sbjct: 170 LGLKLG------VPFEYTWSCHN-------NYDVPCGQCSGCLARRRAFNELGVK 211


>gi|260430380|ref|ZP_05784353.1| ExsB protein [Citreicella sp. SE45]
 gi|260418409|gb|EEX11666.1| ExsB protein [Citreicella sp. SE45]
          Length = 233

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/241 (21%), Positives = 85/241 (35%), Gaps = 33/241 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L++ SGG DS +      D+      +SFDYGQR++ EL+      +++         
Sbjct: 2   KTLVICSGGLDSVSLAHIIADQHRLTRLVSFDYGQRHRKELDFAAAAARRLN-------- 53

Query: 70  SLGEDHILPL----AILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                H++ +    A L   + +           +  +  T VP RN I L     +A  
Sbjct: 54  --VPHHLIDMRGIGASLSGSALTDDIDVPDGHYAEETMRITVVPNRNAIMLAIGFGVAAA 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAI--ETAINLGMESHVTVHTPLMWLKKYETWKL 183
            G   +   V   D+  YPDCR    +A        L   + V +HTP +   K +  + 
Sbjct: 112 NGDEAVATAVHGGDHFIYPDCRPAFTQAFDAMQQAALDGYASVRLHTPFVERSKADIVRA 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQ 239
               G          E+ +CY G           C  C  C  R++ +          Y 
Sbjct: 172 GAAHGT------PFAETWSCYKGGE-------VHCGRCGTCVERREAFHLAGVGDPTAYA 218

Query: 240 D 240
           D
Sbjct: 219 D 219


>gi|91200479|emb|CAJ73527.1| similar to PP-loop ATPase family including transcriptional
           regulator ExsB [Candidatus Kuenenia stuttgartiensis]
          Length = 225

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 63/239 (26%), Positives = 97/239 (40%), Gaps = 22/239 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +K   +A++L SGG DS    + A +    +  L  +YGQR + +         +I    
Sbjct: 1   MKGKDTAIVLASGGLDSCVTAAIA-NETYDLALLHINYGQRTESKELSA---FHEIAAYY 56

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD-NNLPNTFVPGRNIIFLVFAATLA 123
               + +   +I  L  +G  S +     V     D   +P T+VP RN +FL  A + A
Sbjct: 57  KVPAEQILIANIDYLKKIGGSSLTDTMIPVQEAEPDSKEIPTTYVPFRNTLFLSVAVSWA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETW 181
             +G   + IG    D  GYPDC+          I+ G +    + V TPL++  K E  
Sbjct: 117 EVIGAEKVFIGAVSHDTPGYPDCKPFYYEVFNKLIDAGTKPETRIAVETPLIFKTKAEIV 176

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
            L   +         L  S +CY             C  C +CYLR+K + E    Y+D
Sbjct: 177 TLGISL------KAPLHLSWSCYKNTDK-------ACGVCNSCYLRRKAFEESG--YKD 220


>gi|291443190|ref|ZP_06582580.1| exsB protein [Streptomyces roseosporus NRRL 15998]
 gi|291346137|gb|EFE73041.1| exsB protein [Streptomyces roseosporus NRRL 15998]
          Length = 229

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 50/231 (21%), Positives = 83/231 (35%), Gaps = 23/231 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + + SGG DS             V  LS DYGQR++ E +       +I         
Sbjct: 9   RVIAIVSGGLDSVVLAHHLHAEGHEVHLLSIDYGQRHRKEHDYARIAADRIGAEHEIVDL 68

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           S         ++L   S +    +V  +          VP RN+I L  A   A  +   
Sbjct: 69  SNVA------SMLPGYSLTDSQVDVPDQHYTAPGSVNVVPNRNVILLSVAYGKAAAVKAD 122

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGM----ESHVTVHTPLMWLKKYETWKLAQ 185
            + IG    D S  PDC  + I +      +       +H+ V  P + L K++  +L +
Sbjct: 123 QVAIGALAGDASTAPDCSAEFISSFNAMEKIACAGYAPAHLEVVAPFIDLHKHDVIRLGE 182

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            +G      +   E+ +C+ G           C +C AC  R + +   + 
Sbjct: 183 KLG------VDWTETWSCFKGTE-------VHCGTCAACVDRIQAFERAET 220


>gi|34541004|ref|NP_905483.1| exsB protein [Porphyromonas gingivalis W83]
 gi|81417265|sp|Q7MV08|QUEC_PORGI RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|34397319|gb|AAQ66382.1| exsB protein [Porphyromonas gingivalis W83]
          Length = 220

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 60/237 (25%), Positives = 97/237 (40%), Gaps = 30/237 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVEL 63
           +++   +L++ SGG DS T +     R      LSFDYG ++   EL       +++   
Sbjct: 1   MQREKDSLIVVSGGMDSVTLMYE--KRASIALALSFDYGSKHNARELSFARLHAERLG-- 56

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLT----KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                    E  I+PL  +G    S L          +  + N+ +T VP RN I L  A
Sbjct: 57  --------VEHLIIPLDFIGQYFQSDLLLSGGDIPEGRYDEENMKSTVVPFRNGIMLAVA 108

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           A LA   G+  I I     D++ YPDCR   IR +  A+  G  + V +  P   + K +
Sbjct: 109 AGLAESRGLRRIYIANHFGDHAIYPDCRASFIRPMTEAVRCGTTNGVLIEAPYTDITKTD 168

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
             ++   +G      +   E+ +CY G         + C  C  C  R++   +   
Sbjct: 169 IARIGASLG------IDYAETWSCYKGGV-------FHCGVCGTCVERREALHDAGI 212


>gi|15922650|ref|NP_378319.1| succinoglycan biosynthesis regulator [Sulfolobus tokodaii str. 7]
 gi|74573079|sp|Q96Y49|QUEC2_SULTO RecName: Full=7-cyano-7-deazaguanine synthase 2; AltName:
           Full=7-cyano-7-carbaguanine synthase 2; AltName:
           Full=Archaeosine biosynthesis protein queC 2; AltName:
           Full=PreQ(0) synthase 2
 gi|15623440|dbj|BAB67428.1| 460aa long hypothetical succinoglycan biosynthesis regulator
           [Sulfolobus tokodaii str. 7]
          Length = 460

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 87/229 (37%), Gaps = 18/229 (7%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           KK    L++ SGG DS+   ++ L +   +  L F+Y   +    E      KKI E + 
Sbjct: 236 KKIKKVLVIASGGLDSTVAATYLLRQGYEITLLHFNY---HHKAEEREREAVKKIAEYLQ 292

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                +  D    +     +          +  +     + +VP RN+IF   A  LA  
Sbjct: 293 VPLIEIDTDLFKIIGHTTLLKGGGEIVKDRLGEEGAEFAHEWVPARNLIFYSVALALAEA 352

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIR--AIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            G   I  G+   +   YPD   + +R  A  +    G    V V  P+  L K+E  KL
Sbjct: 353 YGYDAIASGINLEEAGAYPDNEMEFVRLFAKLSPYATGPNKKVEVMMPVGNLVKHEIVKL 412

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
             +IG        L  + +CY G +         C  C  CY+R+  + 
Sbjct: 413 GVEIGA------PLHLTWSCYEGGQK-------HCGKCGPCYMRKMAFR 448


>gi|163746922|ref|ZP_02154279.1| ExsB [Oceanibulbus indolifex HEL-45]
 gi|161380036|gb|EDQ04448.1| ExsB [Oceanibulbus indolifex HEL-45]
          Length = 233

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/237 (22%), Positives = 81/237 (34%), Gaps = 25/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L++ SGG DS +              +SFDYGQR++ E++      K++         
Sbjct: 2   KTLVICSGGLDSVSLAHITAVEHQLTRLVSFDYGQRHRKEVDFAEAAAKRLGVPFHLIDM 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     A L   + +           ++ +  T VP RN I L     +A   G  
Sbjct: 62  RGIG------AALSGSALTDDIDVPDGHYAEDTMKITVVPNRNAIMLSIGFGIAAAQGDE 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAI--ETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            +   V   D+  YPDCR +  RA        L   + V +HTP +   K E  +     
Sbjct: 116 AVATAVHGGDHFIYPDCRPEFTRAFDAMQQAALDGYAQVRLHTPFVEQSKAEIVRQGAQH 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM----EFKEKYQD 240
           G          E+ +CY G           C  C  C  R++ +          Y D
Sbjct: 176 GT------PFAETWSCYKGGE-------VHCGRCGTCVERREAFHLAEVSDPTVYAD 219


>gi|268324681|emb|CBH38269.1| conserved hypothetical protein, ExsB family [uncultured archaeon]
          Length = 274

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 56/242 (23%), Positives = 93/242 (38%), Gaps = 22/242 (9%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELM 64
           K   +A+ + SGG DS+   + A +    +      YGQR +  E E    +   +    
Sbjct: 32  KMTKTAVCVCSGGIDSTVTATIASEEGYELHFFHASYGQRAEAREKEVVEEIASYLNAKE 91

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            K+ + L     L  + L D + S           +   P+T+VP RNII L  A+  A 
Sbjct: 92  LKFAE-LPFLKELGGSSLTDKARSVPVGKEVNLDAEKETPSTWVPCRNIILLANASAFAE 150

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIE---TAINLGMESHVTVHTPLMWLKKYETW 181
            +    I +G    +   YPD   + +                   V  PL+ L K E  
Sbjct: 151 VISADAIFVGFNAEEARSYPDNEKEFVDRYNAVLEKAVASYCRPPIVKAPLVDLLKQEII 210

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EK 237
           K   +      V   L+ +++CYLG++         C  C +C  R++G+ +       K
Sbjct: 211 KKGVE------VKAPLQLTYSCYLGEKK-------HCGICESCQHRRRGFKDAGVEDPTK 257

Query: 238 YQ 239
           Y+
Sbjct: 258 YK 259


>gi|242399134|ref|YP_002994558.1| Archaeosine biosynthesis protein queC [Thermococcus sibiricus MM
           739]
 gi|242265527|gb|ACS90209.1| Archaeosine biosynthesis protein queC [Thermococcus sibiricus MM
           739]
          Length = 241

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 62/252 (24%), Positives = 103/252 (40%), Gaps = 33/252 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +K    A++LFSGG DS+ CL WA + +D V  L+ +YG            V  KI E  
Sbjct: 1   MKMT-RAVVLFSGGLDSTACLYWAKENYDEVIMLTINYGSN-------EEKVINKIAEFF 52

Query: 65  PKWKDSLGEDHILPLAIL-------------GDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
            K  +      I+ L  L             G+    +       +       + +VP R
Sbjct: 53  SK--ELNIPLKIIHLDFLEEFSKLRGTTLVGGETPKVTSKDLENTEKAQETAKSVWVPAR 110

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
           N++ +  AA+L   LG  +I++G    +   +PD   + +  +   +  G  S V V  P
Sbjct: 111 NLVLISVAASLLDALGGGDIIVGFNAEEGMTFPDNTPEFVEKMNNMLKYGSMSDVKVVAP 170

Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
           L+ L K    +L ++ G +       E S++CY+ K          C  C +C  R +G 
Sbjct: 171 LIGLSKKGIARLLKEFGAK------YEYSNSCYMPKGFTEDGKPIHCGECESCIRRHRGL 224

Query: 232 M----EFKEKYQ 239
           +    E +  Y+
Sbjct: 225 VDSIGEDRTVYR 236


>gi|288869676|ref|ZP_05975624.2| ExsB protein [Methanobrevibacter smithii DSM 2374]
 gi|288860993|gb|EFC93291.1| ExsB protein [Methanobrevibacter smithii DSM 2374]
          Length = 227

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 58/245 (23%), Positives = 106/245 (43%), Gaps = 40/245 (16%)

Query: 7   KAPSALLLFSGGQDS--STCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVEL 63
               A+ + SGG DS  +TC+         +  ++F+YGQ++   EL+    + KK+   
Sbjct: 2   MTKKAIAVLSGGLDSCVATCVY---AEDYEIHGITFNYGQKSFKQELKASEEICKKMG-- 56

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK-----------IQDNNLPNTFVPGRN 112
                       ++ L  L  IS+SSLT +  +            I ++   + +VPGRN
Sbjct: 57  --------FTHEVIDLPWLNKISNSSLTSDNEIPTLTHEELDDLDICEDTASSVWVPGRN 108

Query: 113 IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
           I+F   A + A  +G   I++G  + + + +PD   + + +    +N+G   ++ +  P 
Sbjct: 109 IVFTSIATSYAESIGAEIIIVGWDKEEAATFPDNSKEFLESFNNMLNVGSPQNIEIKAPA 168

Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
           + L K E  KL  +I         +E S++CY G           C  C +C  R++ + 
Sbjct: 169 IDLNKDEIVKLGDEI------KAPMELSYSCYTGHEK-------HCGVCESCMRRKRAFK 215

Query: 233 EFKEK 237
               K
Sbjct: 216 LADVK 220


>gi|288802312|ref|ZP_06407752.1| ExsB protein [Prevotella melaninogenica D18]
 gi|288335279|gb|EFC73714.1| ExsB protein [Prevotella melaninogenica D18]
          Length = 218

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 56/234 (23%), Positives = 88/234 (37%), Gaps = 30/234 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKW 67
             ++++ SGG DS T L    +       +SFDYGQ +   EL       +K+       
Sbjct: 2   KDSVIIVSGGLDSITLLYDKAET--IALAISFDYGQNHGAKELPYAQYHCEKLG------ 53

Query: 68  KDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    +PL+ +     SSL            ++ N+ +T VP RN I L  A  +A
Sbjct: 54  ----IPHITIPLSFMHQYFKSSLLDGADAIPEGHYEEENMKSTVVPFRNGIMLAIATGIA 109

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
               +  + I     D++ YPDCR + I A+  A   G    V V  P   + K E    
Sbjct: 110 ESHELKRVYIANHGGDHTIYPDCRPEFIHAMNGATEAGTFVKVRVEAPYTEITKAEIVAR 169

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
              +G      +   ++ +CY G           C  C  C  R++ +     K
Sbjct: 170 GAALG------IDYSKTWSCYKGAD-------IHCGKCGTCVERKEAFEAAGVK 210


>gi|15896988|ref|NP_341593.1| transcription regulator (exsB) related protein [Sulfolobus
           solfataricus P2]
 gi|284173860|ref|ZP_06387829.1| transcription regulator (exsB) related protein [Sulfolobus
           solfataricus 98/2]
 gi|74543016|sp|Q981C9|QUEC_SULSO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|13813145|gb|AAK40383.1| Transcription regulator (exsB) related protein [Sulfolobus
           solfataricus P2]
 gi|261601641|gb|ACX91244.1| exsB protein [Sulfolobus solfataricus 98/2]
          Length = 464

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 51/233 (21%), Positives = 85/233 (36%), Gaps = 20/233 (8%)

Query: 4   IIKKAPS--ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           I++K      L++ SGG DS+   +  L     V  + F+Y   +    E      +KI 
Sbjct: 235 IMEKRKKYRVLVVASGGLDSTVAATKLLREGHEVTLIHFNY---HHKAEEKEREAVRKIA 291

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           E +      +  D    +     I             +     + +VP RN+IF   +  
Sbjct: 292 EYLQIPLLEINTDLFKIIGHATLIKGGGEIVKDRKGEEGAEFAHEWVPARNLIFFSVSLA 351

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIET--AINLGMESHVTVHTPLMWLKKYE 179
           +A   G   I  G+   +   YPD   + IR +        G    + +  P+  L K+E
Sbjct: 352 IAEAYGYDAIASGINLEEAGAYPDNEMEFIRMLNKLSPYATGPNKRIEILMPVGNLVKHE 411

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
             KL  +IG        L  + +CY G +         C  C  CY+R+  + 
Sbjct: 412 IVKLGYEIGA------PLHLTWSCYEGGQK-------HCGKCGPCYMRKMAFR 451


>gi|239986244|ref|ZP_04706908.1| succinoglycan biosynthesis regulator [Streptomyces roseosporus NRRL
           11379]
          Length = 223

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 50/231 (21%), Positives = 83/231 (35%), Gaps = 23/231 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + + SGG DS             V  LS DYGQR++ E +       +I         
Sbjct: 3   RVIAIVSGGLDSVVLAHHLHAEGHEVHLLSIDYGQRHRKEHDYARIAADRIGAEHEIVDL 62

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           S         ++L   S +    +V  +          VP RN+I L  A   A  +   
Sbjct: 63  SNVA------SMLPGYSLTDSQVDVPDQHYTAPGSVNVVPNRNVILLSVAYGKAAAVKAD 116

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGM----ESHVTVHTPLMWLKKYETWKLAQ 185
            + IG    D S  PDC  + I +      +       +H+ V  P + L K++  +L +
Sbjct: 117 QVAIGALAGDASTAPDCSAEFISSFNAMEKIACAGYAPAHLEVVAPFIDLHKHDVIRLGE 176

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            +G      +   E+ +C+ G           C +C AC  R + +   + 
Sbjct: 177 KLG------VDWTETWSCFKGTE-------VHCGTCAACVDRIQAFERAET 214


>gi|73667687|ref|YP_303702.1| succinoglycan biosynthesis regulator [Methanosarcina barkeri str.
           Fusaro]
 gi|110816232|sp|Q46G70|QUEC_METBF RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|72394849|gb|AAZ69122.1| succinoglycan biosynthesis regulator [Methanosarcina barkeri str.
           Fusaro]
          Length = 231

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/244 (23%), Positives = 96/244 (39%), Gaps = 39/244 (15%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKWK 68
            A+ L S G DS   L+ A + FD    ++FDYGQR +  E+E    V +          
Sbjct: 2   KAITLLSSGLDSVAALAIAAEDFDIEMAITFDYGQRAREREIEYSRKVCEYFG------- 54

Query: 69  DSLGEDHILPLAILGDISHS---------------SLTKNVAMKIQDNNLPNTFVPGRNI 113
               E  ++ L  L +I+ +                + +    +I D +    +VP RN 
Sbjct: 55  ---IEHRVIKLDWLSEITSTSLVNRDVEVPSLSFEDIGEAAPAEITDASAKAVWVPNRNG 111

Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
           + L  A + A       +V+G    +   +PD   D ++A++ A     ++ V +  PL+
Sbjct: 112 VMLNIAGSFAESRECEYLVVGFNGEEAGTFPDNSLDYVKAMDRAFFYSTQNGVKILAPLI 171

Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
            L K E  + A +          LE S +CY G+          C  C +C  R + +  
Sbjct: 172 ELGKTEIVRRALE------AKAPLEYSWSCYRGEE-------IPCGECESCVRRARAFKN 218

Query: 234 FKEK 237
              K
Sbjct: 219 AGVK 222


>gi|110597996|ref|ZP_01386277.1| ExsB [Chlorobium ferrooxidans DSM 13031]
 gi|110340445|gb|EAT58934.1| ExsB [Chlorobium ferrooxidans DSM 13031]
          Length = 226

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 58/235 (24%), Positives = 94/235 (40%), Gaps = 29/235 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DS    + A +    +  +  +YGQR            K++         
Sbjct: 2   RAVVLLSGGMDSLVTTAMAHEHGFELAAMHVNYGQRTWH---------KELASFRDICNH 52

Query: 70  SLGEDHI-LPLAILGDISHSSLTK----NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +  + +    L  I  SSLT          +Q + +P ++VP RN  FL  A + + 
Sbjct: 53  YNIDRRLEVDADFLARIGGSSLTDLSMPVSGADLQGSEIPTSYVPFRNANFLSMAVSWSE 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWK 182
            +G   I IG  E D SGYPDCR     A    I LG +    + + TPL+ ++K +   
Sbjct: 113 VIGANRIFIGAVEEDSSGYPDCRKIFYEAFNQVIALGTKPETTIEIVTPLIEMQKSDIVH 172

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                    L+++    S +CY  +       G  C  C +C  R + +     +
Sbjct: 173 RGM------LLDVPFAYSWSCYKSE-------GRACGVCDSCARRLRAFELVGVR 214


>gi|145219402|ref|YP_001130111.1| exsB protein [Prosthecochloris vibrioformis DSM 265]
 gi|189038933|sp|A4SDQ0|QUEC_PROVI RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|145205566|gb|ABP36609.1| exsB protein [Chlorobium phaeovibrioides DSM 265]
          Length = 227

 Score =  136 bits (342), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 63/234 (26%), Positives = 99/234 (42%), Gaps = 27/234 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKK--IVELMPK 66
            A++L SGG DS    + A +   ++  +  +YGQR  + ELE    +     I EL+  
Sbjct: 2   KAVVLLSGGMDSLVTTAIAHNEGLQLAAMHVNYGQRTWQRELESFRSIAGHYGIGELLEV 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKI-QDNNLPNTFVPGRNIIFLVFAATLAYR 125
             D LG         +G  S +  T  V+    Q   +P ++VP RN  FL  A + A  
Sbjct: 62  NADFLGT--------IGGSSLTDHTMAVSGADLQGTAIPTSYVPFRNACFLSMAVSWAEV 113

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKL 183
           +G   + IG  E D SGYPDCR     A    I LG +    + + TPL+ ++K    + 
Sbjct: 114 IGAQKLYIGAVEEDSSGYPDCRKVFYDAFNKVIELGTKPETGIEILTPLIAMQKAGIVEK 173

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
             ++      +     S +CY  +       G  C  C +C  R + +     +
Sbjct: 174 GMEL------DAPFHYSWSCYKSE-------GKACGVCDSCARRLRAFELVGVR 214


>gi|148642996|ref|YP_001273509.1| transcription regulator-related ATPase, ExsB [Methanobrevibacter
           smithii ATCC 35061]
 gi|167016437|sp|A5ULR3|QUEC_METS3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|148552013|gb|ABQ87141.1| transcription regulator-related ATPase, ExsB [Methanobrevibacter
           smithii ATCC 35061]
          Length = 227

 Score =  136 bits (341), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 58/245 (23%), Positives = 106/245 (43%), Gaps = 40/245 (16%)

Query: 7   KAPSALLLFSGGQDS--STCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVEL 63
               A+ + SGG DS  +TC+         +  ++F+YGQ++   EL+    + KK+   
Sbjct: 2   MTKKAITVLSGGLDSCVATCVY---AEDYEIHGITFNYGQKSFKQELKASEEICKKMG-- 56

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK-----------IQDNNLPNTFVPGRN 112
                       ++ L  L  IS+SSLT +  +            I ++   + +VPGRN
Sbjct: 57  --------FTHEVIDLPWLNKISNSSLTSDNEIPTLTHEELDDLDICEDTASSVWVPGRN 108

Query: 113 IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
           I+F   A + A  +G   I++G  + + + +PD   + + +    +N+G   ++ +  P 
Sbjct: 109 IVFTSIATSYAESIGAEIIIVGWDKEEAATFPDNSKEFLESFNNMLNVGSPQNIEIKAPA 168

Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
           + L K E  KL  +I         +E S++CY G           C  C +C  R++ + 
Sbjct: 169 IDLNKDEIVKLGDEI------KAPMELSYSCYTGHEK-------HCGVCESCMRRKRAFK 215

Query: 233 EFKEK 237
               K
Sbjct: 216 LADVK 220


>gi|302346706|ref|YP_003815004.1| protein ExsB [Prevotella melaninogenica ATCC 25845]
 gi|302150631|gb|ADK96892.1| protein ExsB [Prevotella melaninogenica ATCC 25845]
          Length = 218

 Score =  136 bits (341), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 56/234 (23%), Positives = 88/234 (37%), Gaps = 30/234 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKW 67
             ++++ SGG DS T L    +       +SFDYGQ +   EL       +K+       
Sbjct: 2   KDSVIIVSGGLDSITLLYDKAET--IALAISFDYGQNHGAKELPYAQYHCEKLG------ 53

Query: 68  KDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    +PL+ +     SSL            ++ N+ +T VP RN I L  A  +A
Sbjct: 54  ----IPHITIPLSFMHQYFKSSLLDGADAIPEGHYEEENMKSTVVPFRNGIMLAIATGIA 109

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
               +  + I     D++ YPDCR + I A+  A   G    V V  P   + K E    
Sbjct: 110 ESHELKRVYIANHGGDHTIYPDCRPEFIHAMNGATEAGTFVKVRVEAPYTEITKAEIVAR 169

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
              +G      +   ++ +CY G           C  C  C  R++ +     K
Sbjct: 170 GAALG------IDYSKTWSCYKGAD-------IHCGKCGTCVERKEAFEAAGVK 210


>gi|259418809|ref|ZP_05742726.1| ExsB protein [Silicibacter sp. TrichCH4B]
 gi|259345031|gb|EEW56885.1| ExsB protein [Silicibacter sp. TrichCH4B]
          Length = 233

 Score =  136 bits (341), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 52/237 (21%), Positives = 80/237 (33%), Gaps = 25/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L++ SGG DS +      +       +SFDYGQR++ E++      K++         
Sbjct: 2   KTLVICSGGLDSVSLAHITANEHQLTRLVSFDYGQRHRKEVDFAEAAAKRLGVPFHLIDM 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                       L   + +           +  +  T VP RN I L     +A   G  
Sbjct: 62  RGIG------GALTGSALTDDIDVPDGHYAEETMKITVVPNRNAIMLSIGFGIAAAQGDA 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAI--ETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            +   V   D+  YPDCR    RA        L   + V +HTP +   K E  +     
Sbjct: 116 AVATAVHGGDHFIYPDCRPGFTRAFDAMQRAALEGYADVRLHTPFVEHSKAEIVRQGAQH 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK----YQD 240
           G          E+ +CY G         + C  C  C  R++ +          Y D
Sbjct: 176 GT------PFAETWSCYKGG-------AFHCGRCGTCVERREAFHLAGVNDPTTYAD 219


>gi|52550044|gb|AAU83893.1| transcriptional regulator [uncultured archaeon GZfos34H9]
          Length = 242

 Score =  136 bits (341), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 56/235 (23%), Positives = 91/235 (38%), Gaps = 18/235 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMP 65
               A+ + SGG DS+   + A      +      YGQR +  E E    +   +     
Sbjct: 1   MTKIAVCVCSGGIDSTVTATIAAKEGYELHFFHASYGQRAEAREKEVVEEIAAYLNAKEL 60

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           K+ + L     L  + L DI+ S          ++   P+T+VP RNII L  A+  A  
Sbjct: 61  KFAE-LPFLKELGGSSLTDIARSVPVGKEVNLDEEKETPSTWVPCRNIILLANASAFAEV 119

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG---MESHVTVHTPLMWLKKYETWK 182
           +    I +G    +   YPD   + +      +           T+  PL+ L K E  K
Sbjct: 120 ISADAIFVGFNAEEARSYPDNEKEFVDRYNAVLEKAVAYYCRPPTLKAPLVDLLKPEIIK 179

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
              +      V   L+ S++CYLG +         C  C +C  R++G+ E   +
Sbjct: 180 KGVE------VKAPLQLSYSCYLGDKK-------HCGICESCQHRRRGFKEAGVE 221


>gi|192896495|gb|ACF06644.1| ToyM [Streptomyces rimosus]
          Length = 238

 Score =  136 bits (341), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 52/242 (21%), Positives = 98/242 (40%), Gaps = 34/242 (14%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           SA+++ SGG DS+T L+       R+  ++ DYGQR++ E++    +             
Sbjct: 12  SAVVVLSGGMDSTTLLAHYAMLRYRLTAVTVDYGQRHRREIDAARTIAGHYGA------- 64

Query: 70  SLGEDHILPLAILGDISHSSLTKN-----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              E H++ L+ +G +   S   +      +    + ++  T VP RN I    A   A 
Sbjct: 65  ---EHHVVDLSGIGVLLGGSALTDSEVDVPSGHYAEESMRATVVPNRNAILANVAVGAAV 121

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWK 182
                 + +G+   D+  YPDCR   + A++  + +     +   V  P +   K +  +
Sbjct: 122 ARQAGIVALGMHAGDHFVYPDCRPAFVEALDGLVRVANEGFATPRVEAPFIHWSKTDIAR 181

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF----KEKY 238
               +         L++S +CY G           C +C  CY R++ + +       +Y
Sbjct: 182 YGSRL------EAPLDKSWSCYRGGE-------LHCGTCGTCYERREAFRDADVPDPTEY 228

Query: 239 QD 240
            D
Sbjct: 229 LD 230


>gi|297619989|ref|YP_003708094.1| exsB protein [Methanococcus voltae A3]
 gi|297378966|gb|ADI37121.1| exsB protein [Methanococcus voltae A3]
          Length = 234

 Score =  136 bits (341), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 89/232 (38%), Gaps = 10/232 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+ + SGG DS+     A  +   +  L+F+YGQ+             +I+    K  D
Sbjct: 2   KAICVLSGGLDSTVASLIAKQKGYDITCLTFNYGQQALKNEISASKKIAEILGAEHKIID 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVA----MKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 +  L+  G  +    + +        + +  +   +VP RN+I    A+ LA  
Sbjct: 62  LNFLSEMCELSECGLKTGDIPSISEENLDNRVVAEQTMKKVWVPARNLIMFSIASGLAEA 121

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +    +  G+ E + S +PD   + +         G  + V +  PL  + K E  K   
Sbjct: 122 ICADYVYCGINEEEASTFPDNTMEFMDRFNKCNEYGTLNKVKLEAPLYKMNKDEIVKKGI 181

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           ++  +  + L L+ S++CY             C  C +C  R++ +     +
Sbjct: 182 ELEQKLGLEL-LKYSYSCY-----HENPEFIHCGICESCMRRKRAFKLANTE 227


>gi|289548574|ref|YP_003473562.1| exsB protein [Thermocrinis albus DSM 14484]
 gi|289182191|gb|ADC89435.1| exsB protein [Thermocrinis albus DSM 14484]
          Length = 214

 Score =  135 bits (340), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 92/229 (40%), Gaps = 23/229 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+L SGG DS+  L  A   F+ V  +SFDYGQR+ VEL+    + +          +
Sbjct: 3   RILVLLSGGMDSAVLLWLAKREFEEVYAISFDYGQRHSVELKYAKILAQLAGVKEHILVE 62

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                +I      G     +  +    +   +  P T VP RN++FL  A++ A  L I 
Sbjct: 63  VPSYRYI-----KGSALIDTRVEVPTGEYPTHAPPITTVPMRNLVFLAIASSFADALEID 117

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKLA 184
           ++ IGV   D             A        ++     + V V  P + + K +   L 
Sbjct: 118 HVGIGVHALDTPYPDCRPEFITAAEAAINAASVQTATKKTRVHVFAPFLGMTKRQIALLG 177

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
           +++G      +  E++++CY G           C  CP C  R++   +
Sbjct: 178 KELG------VPFEKTYSCYRGTEPP-------CGECPTCIQREEALRD 213


>gi|254467069|ref|ZP_05080480.1| exsB protein [Rhodobacterales bacterium Y4I]
 gi|206687977|gb|EDZ48459.1| exsB protein [Rhodobacterales bacterium Y4I]
          Length = 233

 Score =  135 bits (340), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 52/237 (21%), Positives = 80/237 (33%), Gaps = 25/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +++ SGG DS +      +       +SFDYGQR++ EL+      K++         
Sbjct: 2   KTIVICSGGLDSVSLAHMVAEEHQLTRLVSFDYGQRHRKELDYAAAAAKRLGVPHDIIDM 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     A L   + +           +  +  T VP RN I L  A  +A   G  
Sbjct: 62  RGIG------AALSGSALTDDIDVPDGHYAEETMKVTVVPNRNAIMLTIAYGIAAANGDD 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAI--ETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            +   V   D+  YPDCR     A        L   + V ++TP +   K +        
Sbjct: 116 AVATAVHGGDHFIYPDCRPAFTEAFDAMQRAALDGYADVRLYTPFVHRTKGDIVTAGAKH 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM----EFKEKYQD 240
                 N    E+ +CY G           C  C  C  R++ +     E    Y D
Sbjct: 176 ------NTPFAETWSCYKGGEK-------HCGRCGTCVERREAFHLAGVEDPTDYAD 219


>gi|312898409|ref|ZP_07757799.1| ExsB protein [Megasphaera micronuciformis F0359]
 gi|310620328|gb|EFQ03898.1| ExsB protein [Megasphaera micronuciformis F0359]
          Length = 229

 Score =  135 bits (340), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 54/234 (23%), Positives = 91/234 (38%), Gaps = 21/234 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVEL---M 64
              +L SGG DS+T L+ A+D +  + V  LS  YGQ++K EL C   +           
Sbjct: 2   KTAVLLSGGIDSTTALAQAVDTYGAENVIALSVLYGQKHKKELNCAEKIANYYGVRRISF 61

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     + L       +  +S  + +    +  +  +T+VP RN IFL  AA +A 
Sbjct: 62  DVSPLFSYSHNSLMENSDKAVPQTSYAEQIEET-KGQSPVSTYVPFRNGIFLSAAAGVAL 120

Query: 125 RLGITNIVI--GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
            L    +V      +   + YPDC      A++TA+  G    +T+  P + + K +   
Sbjct: 121 SLDCERVVYGAHADDAAGAAYPDCSPAFFDAMKTAVYEGTGGGITLEAPFIHMNKADIVA 180

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
               +      ++  E + +CY G           C  C  C  R+  +     
Sbjct: 181 EGLRL------HVPYELTWSCYEGGDKP-------CGLCGTCRDREAAFSANGT 221


>gi|14590038|ref|NP_142102.1| hypothetical protein PH0085 [Pyrococcus horikoshii OT3]
 gi|3256471|dbj|BAA29154.1| 269aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 269

 Score =  135 bits (340), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 58/231 (25%), Positives = 106/231 (45%), Gaps = 10/231 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMP 65
           +    ++LFSGG DS+ CL WA   +D V  L+ +YG R +    +      K++   + 
Sbjct: 30  EMKRGVVLFSGGLDSTACLYWAKRHYDEVIMLTINYGSREESVMNKVAEFFSKELKIPLK 89

Query: 66  KWK-DSLGEDHILPLAIL--GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
             + + L E   L  + L  G++   S ++   ++       + +VP RN++ +  AA+L
Sbjct: 90  IIRVNFLNEFSKLSGSALVEGNVPRVSASELEVIERAKETARSVWVPARNLVLISIAASL 149

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              LG  +I++G  + +   +PD   + +  +  A+     + V V  PL+ L K    +
Sbjct: 150 LDALGGGDIIVGFNKEEGETFPDNTKEFVERVNKALEYATMNKVRVVAPLIELDKRGIAR 209

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
           L +++G +       E S++CY  K          C  C +C  R +G ME
Sbjct: 210 LLKELGAK------YEYSNSCYDPKGFTEDGKPIHCGRCESCVRRHRGLME 254


>gi|51244019|ref|YP_063903.1| hypothetical protein DP0167 [Desulfotalea psychrophila LSv54]
 gi|81643310|sp|Q6ARX9|QUEC_DESPS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|50875056|emb|CAG34896.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
          Length = 219

 Score =  135 bits (340), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 26/226 (11%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           ++++ SGG DS+  L+  L      + +SFDYG ++           +++   +   ++ 
Sbjct: 4   SIIVLSGGMDSAVLLAQTLKEGKTAQAISFDYGSKHND---------RELPMAVGLCEEF 54

Query: 71  LGEDHILPLAILGDISHSS----LTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +  I+ L  +G++  SS      +         N+ +T VP RN I L  AA  A  +
Sbjct: 55  AIKHQIIKLPFIGELFSSSLLTGGEEIPDGAYGQENMKSTVVPFRNGIMLAIAAGYAESV 114

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +++G    D+  YPDCR +   A   A+NLG +  V +  P   + K +   L + 
Sbjct: 115 QAGEVLLGSHSGDHHIYPDCRPEFNNAFAEAVNLGTDGQVAIRFPFSEMTKRDIGDLGRT 174

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
           +      +L   ++ TCY G           C  C AC  R++   
Sbjct: 175 L------DLDFAKTWTCYKGGE-------LHCGVCAACDERKEALR 207


>gi|300727735|ref|ZP_07061121.1| protein ExsB [Prevotella bryantii B14]
 gi|299775023|gb|EFI71629.1| protein ExsB [Prevotella bryantii B14]
          Length = 217

 Score =  135 bits (340), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 30/234 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKW 67
             ++++ SGG DS T L     + +    +SFDYG  +   E+       +++       
Sbjct: 2   KDSVIVVSGGLDSITLLYE--KQAEIALGISFDYGSNHNSKEIPFAKMHCERLG------ 53

Query: 68  KDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                +   + L  +     SSL +           + N+ +T VP RN I L  A  LA
Sbjct: 54  ----IKHITINLEFMHQYFKSSLLEGGDAIPEGNYDEENMKSTVVPFRNGIMLSIAVGLA 109

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              G+  I I     D++ YPDCR + I+AI+ A   G   +V +  P   + K +  K 
Sbjct: 110 ESHGLKRIFIANHGGDHTIYPDCRPEFIQAIDNAAQAGTYENVRIEAPYTNITKADIVKR 169

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
              +G      +  E++ +CY G           C  C  C  R++ +     +
Sbjct: 170 GSALG------IHYEDTWSCYKGGD-------IHCGKCGTCTERKEAFELAGVQ 210


>gi|315231295|ref|YP_004071731.1| queuosine biosynthesis QueC-like ATPase [Thermococcus barophilus
           MP]
 gi|315184323|gb|ADT84508.1| queuosine biosynthesis QueC-like ATPase [Thermococcus barophilus
           MP]
          Length = 242

 Score =  135 bits (340), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 60/237 (25%), Positives = 98/237 (41%), Gaps = 28/237 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++LFSGG DS+ CL WA   +D V  L+ +YG               K+ E   K  +
Sbjct: 3   RAVVLFSGGLDSTACLYWAKKNYDEVIMLTINYGSN-------EERATNKVAEFFSK--E 53

Query: 70  SLGEDHILPLAIL-------------GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
                 I+ L  L             G+    +      M+       + +VP RN++ +
Sbjct: 54  LNIPLKIIKLDFLEEFSKLRGTTLVGGETPRVTARDLENMERAQETAKSVWVPARNVVLI 113

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
             AA+L   LG  +I++G    + + +PD   + +  +   +  G  S V V  PL+ L 
Sbjct: 114 SVAASLLDALGGGDIIVGFNAEEGATFPDNTPEFVEKMNEMLRYGALSEVKVVAPLINLD 173

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
           K    KL +++  +       E S++CY+ K          C  C +C  R +G ME
Sbjct: 174 KKGIAKLLKELNAK------YEYSNSCYMPKGFTEDGKPIHCGECESCVRRHRGLME 224


>gi|222445233|ref|ZP_03607748.1| hypothetical protein METSMIALI_00861 [Methanobrevibacter smithii
           DSM 2375]
 gi|222434798|gb|EEE41963.1| hypothetical protein METSMIALI_00861 [Methanobrevibacter smithii
           DSM 2375]
          Length = 227

 Score =  135 bits (339), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 59/245 (24%), Positives = 107/245 (43%), Gaps = 40/245 (16%)

Query: 7   KAPSALLLFSGGQDS--STCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVEL 63
               A+ + SGG DS  +TC+         +  ++F+YGQ++ K EL+    + KK+   
Sbjct: 2   MTKKAIAVLSGGLDSCVATCVY---AEDYEIHGITFNYGQKSFKQELKASEEICKKMG-- 56

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMK-----------IQDNNLPNTFVPGRN 112
                       ++ L  L  IS+SSLT +  +            I ++   + +VPGRN
Sbjct: 57  --------FTHEVIGLPWLNKISNSSLTSDNEIPTLTNEELDDLDICEDTASSVWVPGRN 108

Query: 113 IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
           I+F   A + A  +G   I++G  + + + +PD   + + +    +N+G   ++ +  P 
Sbjct: 109 IVFTSIATSYAESIGAEIIIVGWDKEEAATFPDNSKEFLESFNNMLNVGSPQNIEIKAPA 168

Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
           + L K E  KL  +I         +E S++CY G           C  C +C  R++ + 
Sbjct: 169 IDLNKDEIVKLGDEI------KAPMELSYSCYTGHEK-------HCGVCESCMRRKRAFK 215

Query: 233 EFKEK 237
               K
Sbjct: 216 LADVK 220


>gi|87301705|ref|ZP_01084545.1| ExsB [Synechococcus sp. WH 5701]
 gi|87283922|gb|EAQ75876.1| ExsB [Synechococcus sp. WH 5701]
          Length = 243

 Score =  135 bits (339), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 68/238 (28%), Positives = 106/238 (44%), Gaps = 30/238 (12%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
             AP A+ L SGG DS+T  + A++   RV  LSFDYGQR++ ELE    +   +     
Sbjct: 18  SPAPLAVALLSGGLDSATAAALAIEAGYRVIGLSFDYGQRHRQELEAAALLASVLG---- 73

Query: 66  KWKDSLGEDHIL--PLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAATL 122
                L E H +   LA  G  + +     +    + +  +P T+VPGRN +F+    +L
Sbjct: 74  -----LIEHHTIALNLAAWGGSALTDPDIALPGAGVVEGVIPPTYVPGRNTVFIALGLSL 128

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW-----LKK 177
           A   G + +V+GV   DYSGYPDCR D + A ++  +L  ++        +W       K
Sbjct: 129 AEARGASRLVLGVNAVDYSGYPDCRPDYLAAFQSLADLASKAGREGQGAQLWAPLLSWSK 188

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
               + A  +       L +E + +CY G           C  C +C +R     +  
Sbjct: 189 TRIVEEALRL------RLPIERTWSCYAGG-------TVPCGRCDSCRIRDAALRDAG 233


>gi|229496734|ref|ZP_04390445.1| ExsB protein [Porphyromonas endodontalis ATCC 35406]
 gi|229316280|gb|EEN82202.1| ExsB protein [Porphyromonas endodontalis ATCC 35406]
          Length = 225

 Score =  135 bits (339), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 92/229 (40%), Gaps = 30/229 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWKDS 70
           L++ SGG DS+T L     R +    ++FDYG ++ + E+ C     +++          
Sbjct: 13  LIVLSGGLDSTTLLYDY--RDEIALAVTFDYGSKHNQREIPCAQHHCRQLG--------- 61

Query: 71  LGEDHILPLAILGDISHSSLT----KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             E  I+PL  +G    S L     +       + N+  T VP RN I L  AA LA   
Sbjct: 62  -IEHLIIPLGFMGQYFRSDLLLSGGEIPLGAYNEENMQATVVPFRNGIMLSIAAGLAESR 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G+  + I     D++ YPDCR      +  AI  G  + V +  P   L K E   +   
Sbjct: 121 GLKRLFIANHFGDHNIYPDCRATFAEPMAEAILQGTSNSVELAAPYTHLSKSEIVAVGMP 180

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           +G      L    + +CY+G           C  C  C  R++ +    
Sbjct: 181 LG------LDYATTWSCYVGGE-------TQCGECATCRERKEAFALAG 216


>gi|332797158|ref|YP_004458658.1| exsB protein [Acidianus hospitalis W1]
 gi|332694893|gb|AEE94360.1| exsB protein [Acidianus hospitalis W1]
          Length = 463

 Score =  135 bits (339), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 54/241 (22%), Positives = 92/241 (38%), Gaps = 22/241 (9%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K     L++ SGG DS+   ++ L +   +  L F+Y  R+K E E      +KI E + 
Sbjct: 239 KDKKKVLVIASGGLDSTVAATYLLRQGHEITLLHFNY--RHKAE-EKEREAVRKISEYLQ 295

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                +  D    +     +             +     + +VP RN+IF   A  +A  
Sbjct: 296 VPYIEIDTDLFKIIGHTTLLKGGGEIVKERQGEEGAEFAHEWVPARNLIFFSVALAIAEA 355

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIR--AIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            G   I  G+   +   YPD   + +R  +  +    G    + V  P+  L K+E  KL
Sbjct: 356 YGFDAIASGINLEEAGAYPDNEMEFVRLFSKLSPYATGPNKKIEVMMPVGNLVKHEIVKL 415

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM----EFKEKYQ 239
             +IG        L  + +CY G           C  C  CY+R+  +     +   +Y+
Sbjct: 416 GVEIGA------PLHLTWSCYEGGEK-------HCGKCGPCYMRKMAFKINGLKDPVEYE 462

Query: 240 D 240
           +
Sbjct: 463 N 463


>gi|254432181|ref|ZP_05045884.1| exsB protein [Cyanobium sp. PCC 7001]
 gi|197626634|gb|EDY39193.1| exsB protein [Cyanobium sp. PCC 7001]
          Length = 225

 Score =  135 bits (339), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 69/241 (28%), Positives = 107/241 (44%), Gaps = 30/241 (12%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +    P+ + L SGG DS+T  + A++   RV  LSFDYGQR++ EL     +   +   
Sbjct: 1   MATTPPTTIALLSGGLDSATAAALAIEAGHRVIGLSFDYGQRHRRELLAANAIAGAL--- 57

Query: 64  MPKWKDSLGEDHIL--PLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFAA 120
                 +L E H +   LA  G  + +     V      +  +P+T+VPGRN +F+    
Sbjct: 58  ------NLAEHHTIAVNLAAWGGSALTDPALPVPQDGTAEGVIPSTYVPGRNTVFIALGL 111

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWL 175
           +LA   G   +V+GV   DYSGYPDCR D + A +T  +L  +       V +  PL+  
Sbjct: 112 SLAEARGAGRLVLGVNAVDYSGYPDCRPDYLEAFQTLADLASKAGREGRGVRLWAPLVQW 171

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K      A  +G      + +  + +CY G           C  C +C +R    +E  
Sbjct: 172 SKTRIVTEALRLG------VPIASTSSCYSGGDRP-------CGVCDSCRIRDAALIEAG 218

Query: 236 E 236
            
Sbjct: 219 R 219


>gi|239939761|ref|ZP_04691698.1| succinoglycan biosynthesis regulator [Streptomyces roseosporus NRRL
           15998]
          Length = 220

 Score =  135 bits (338), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 50/229 (21%), Positives = 83/229 (36%), Gaps = 23/229 (10%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           + + SGG DS             V  LS DYGQR++ E +       +I         S 
Sbjct: 2   IAIVSGGLDSVVLAHHLHAEGHEVHLLSIDYGQRHRKEHDYARIAADRIGAEHEIVDLSN 61

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
                   ++L   S +    +V  +          VP RN+I L  A   A  +    +
Sbjct: 62  VA------SMLPGYSLTDSQVDVPDQHYTAPGSVNVVPNRNVILLSVAYGKAAAVKADQV 115

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGM----ESHVTVHTPLMWLKKYETWKLAQDI 187
            IG    D S  PDC  + I +      +       +H+ V  P + L K++  +L + +
Sbjct: 116 AIGALAGDASTAPDCSAEFISSFNAMEKIACAGYAPAHLEVVAPFIDLHKHDVIRLGEKL 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           G      +   E+ +C+ G           C +C AC  R + +   + 
Sbjct: 176 G------VDWTETWSCFKGTE-------VHCGTCAACVDRIQAFERAET 211


>gi|55378863|ref|YP_136713.1| succinoglycan biosynthesis ExsB protein [Haloarcula marismortui
           ATCC 43049]
 gi|74517585|sp|Q5V0E6|QUEC_HALMA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|55231588|gb|AAV47007.1| succinoglycan biosynthesis ExsB protein [Haloarcula marismortui
           ATCC 43049]
          Length = 232

 Score =  135 bits (338), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 92/238 (38%), Gaps = 24/238 (10%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDR-VETLSFDYGQRNK-VELECRLCVRKKIVE 62
           +     A++L SGG DS+T    A  R    +  L   YGQ  +  E EC   +   +  
Sbjct: 1   MTDDTRAVVLASGGMDSATAAYEAQTRGYDHLYLLHTSYGQNTEDREYECASALADHVDA 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD-NNLPNTFVPGRNIIFLVFAAT 121
                 ++        L  +G  S +  +  VA    D + +P ++VP RN   L  A +
Sbjct: 61  ADFLHVETG------HLTQIGASSLTDDSMEVADADTDSDEIPTSYVPFRNANLLSMAVS 114

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV--HTPLMWLKKYE 179
            A       + IG    D+SGYPDCR     A +  I+ G +    +    P +   K +
Sbjct: 115 YAEANDCGAVFIGAHSEDFSGYPDCRPAFFDAFQGVIDAGTKPDTDIALVAPFVEWSKTD 174

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
             +   ++G      +   ++ +CY             C +C AC  R + +    E+
Sbjct: 175 IAERGVELG------VPYADTWSCYRDDEP-------ACGTCDACAFRLEAFQRIGER 219


>gi|116753752|ref|YP_842870.1| exsB protein [Methanosaeta thermophila PT]
 gi|121693804|sp|A0B6A6|QUEC_METTP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|116665203|gb|ABK14230.1| preQ(0) biosynthesis protein QueC [Methanosaeta thermophila PT]
          Length = 224

 Score =  134 bits (337), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 88/237 (37%), Gaps = 23/237 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+ L SGG DS+   + A      V  +   YGQ+        +   ++I + +     
Sbjct: 3   RAVCLCSGGLDSTVAATIARRSGMDVYLIHVSYGQQA---ERREIEAIERIADAIGASDL 59

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +           + + +   + +   + P T+V  RN + L  AA  A  LG  
Sbjct: 60  MCSRIDLFRNISALTTQGARIPRGEEVSLDSESTPPTWVYCRNTVLLSMAAAYAEYLGAH 119

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIE---TAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           +I +G    +   YPD R + +                   V  PL+ ++K +  +L  D
Sbjct: 120 SIYVGFNAEEAMSYPDNRPEFVEQFNALLEKAVASFSRPPKVVAPLVDMRKKDIVRLGAD 179

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQ 239
           I         LE + +CYL            C +C +C  R++G++E       +YQ
Sbjct: 180 I------KAPLELTWSCYLNGE-------IHCGTCESCQHRRRGFVEAGIPDPTEYQ 223


>gi|288818468|ref|YP_003432816.1| queuosine biosynthesis protein [Hydrogenobacter thermophilus TK-6]
 gi|288787868|dbj|BAI69615.1| queuosine biosynthesis protein [Hydrogenobacter thermophilus TK-6]
 gi|308752058|gb|ADO45541.1| exsB protein [Hydrogenobacter thermophilus TK-6]
          Length = 214

 Score =  134 bits (337), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 57/232 (24%), Positives = 97/232 (41%), Gaps = 31/232 (13%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            S L+L SGG DS+T L  +   FD++  +SFDYGQR++VE++    + K          
Sbjct: 2   KSVLVLLSGGMDSATLLWLSKKEFDKIYAISFDYGQRHRVEIKYAKDLAK---------M 52

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             + E  I+ +     +  S+L          +      P T VP RN+ F+  AA+ A 
Sbjct: 53  AQVEEHFIVEVPHYSVLKGSALLDQEASIPKGEYPQEEPPITTVPMRNLTFISIAASFAD 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIE-----TAINLGMESHVTVHTPLMWLKKYE 179
            L I +I IGV   D             A       +      +  + ++ P + + K +
Sbjct: 113 TLEIDHIGIGVHALDSPYPDCRPEFITSAEAAVNASSIFVAKTKKRIHIYAPFLGMSKRD 172

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
              + +D+G      +  E++++CY+G           C  C AC  R++  
Sbjct: 173 IALIGRDLG------VPFEKTYSCYVGTEPP-------CGECAACLQRKQAL 211


>gi|281419887|ref|ZP_06250886.1| ExsB protein [Prevotella copri DSM 18205]
 gi|281406014|gb|EFB36694.1| ExsB protein [Prevotella copri DSM 18205]
          Length = 217

 Score =  134 bits (337), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 53/234 (22%), Positives = 94/234 (40%), Gaps = 30/234 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKW 67
             ++++ SGG DS T L     + +    +SF+YG  + + E+       +++       
Sbjct: 2   KDSVIIVSGGMDSITLLYD--KKDEIALGISFNYGSNHNEREIPFAKMHCERLG------ 53

Query: 68  KDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                +   + L  +     SSL +           D+N+ +T VP RN I L  A  +A
Sbjct: 54  ----IKHITIDLGFMHQYFKSSLLEGADAIPEGHYADDNMKSTVVPFRNGIMLSIAIGIA 109

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
               +  + I     D++ YPDCR + I+AI+ A   G    V V  P   + K +  ++
Sbjct: 110 ESNNLKKVFIANHGGDHTIYPDCRPEFIKAIDEAAEAGTFVDVRVVAPYTNITKGQIAEI 169

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            + +G      +   E+ +CY G           C  C  C  R++   E   +
Sbjct: 170 GKKLG------IDYAETWSCYKGGEK-------HCGKCGTCVERKEALAEAGIE 210


>gi|254173289|ref|ZP_04879962.1| exsB protein [Thermococcus sp. AM4]
 gi|214032698|gb|EEB73527.1| exsB protein [Thermococcus sp. AM4]
          Length = 239

 Score =  134 bits (337), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 10/229 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKW 67
             A++LFSGG DS+ CL WA   +D V  L  +YG    +V         K++   +   
Sbjct: 2   KRAVVLFSGGLDSTACLYWAKKNYDEVIMLVINYGSNEERVTNRVAEFFSKELNVPLKIV 61

Query: 68  K-DSLGEDHILPLAIL--GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
           + D L E   L    L  G+    +  +    +       + +VP RN++ +  AA+L  
Sbjct: 62  RLDFLEEFSKLRGTTLVGGETPKVTAQELEDFERAKETAKSVWVPARNVVLIAVAASLLD 121

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            LG  +I++G    + + +PD   + +  +   +  G  + V V  PL+ L K    +L 
Sbjct: 122 ALGGGDIIVGFNAEEGATFPDNTPEFVEKMNEMLKYGTMAEVKVVAPLIDLDKRGIARLL 181

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
           +++  +       E S++CY+ K          C  C +C  R +G +E
Sbjct: 182 KELNAK------YEYSNSCYMPKGFTEDGKPIHCGQCESCVRRHRGLIE 224


>gi|251771686|gb|EES52261.1| exsB protein [Leptospirillum ferrodiazotrophum]
          Length = 229

 Score =  134 bits (337), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 58/240 (24%), Positives = 89/240 (37%), Gaps = 30/240 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      ++L SGG DS+   + A    D +  L   YG R +   E        + +  
Sbjct: 1   MATGGRGVVLVSGGMDSAVTAALARKECDFLGFLHVRYGGRTQRREEQSFRA---LCDHF 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLT----KNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                      I     L  +  S+LT    +     ++   +P T+VP RN  FL  A 
Sbjct: 58  R-----PDRTLITDAPSLAAVGGSALTDGNLEIPEGDLERTGIPVTYVPFRNAHFLSVAV 112

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWL 175
           + A  L    I IG  E D SGYPDCR     A E A  LG    +      + TP++ +
Sbjct: 113 SWAEVLSCDRIYIGAVEEDSSGYPDCRRSFYDAFEQAARLGTAMEMEGSSLSIVTPVIHM 172

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            K E  +    +      ++    + +CY             C  C +C LR +G+    
Sbjct: 173 DKGEIVRTGLSL------SVPFALTWSCYREGEK-------ACGHCDSCLLRLRGFSRAG 219


>gi|315453291|ref|YP_004073561.1| putative queuosine biosynthesis protein [Helicobacter felis ATCC
           49179]
 gi|315132343|emb|CBY82971.1| Putative queuosine biosynthesis protein [Helicobacter felis ATCC
           49179]
          Length = 243

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 89/236 (37%), Positives = 136/236 (57%), Gaps = 21/236 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  + +L FSGGQDS+T   WA   F++   L FDY Q++ +EL     + + +      
Sbjct: 17  KTHTCVLCFSGGQDSTTLALWAKRVFEQTYLLGFDYDQKHAIELAQAHKIARMLE----- 71

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAM-----KIQDNNLPNTFVPGRNIIFLVFAAT 121
                    +L L+ L +IS S+L  + +        Q  +LP++FVP RN +F+  A  
Sbjct: 72  -----LPYKVLDLSCLQEISTSALFAHTSHALNTPHPQAQDLPSSFVPDRNALFITLAHA 126

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH---VTVHTPLMWLKKY 178
            A+ LG   +++GV   DYSGY DCR + I +++T++NLG       + +  PLM+  K 
Sbjct: 127 YAFNLGAQAVLLGVSMQDYSGYFDCRQNFIESLQTSLNLGAFGKKEGINLLAPLMFSSKA 186

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           + ++LA  +GG   + LILE +HTCY G R+ R+E+GYGC  CPAC LRQ+G+M+F
Sbjct: 187 QEFQLAHALGG---LELILEHTHTCYEGVRESRHEFGYGCGVCPACQLRQQGYMKF 239


>gi|240102410|ref|YP_002958719.1| Transcription regulator, putative, ExsB family (ExsB) [Thermococcus
           gammatolerans EJ3]
 gi|239909964|gb|ACS32855.1| Transcription regulator, putative, ExsB family (ExsB) [Thermococcus
           gammatolerans EJ3]
          Length = 239

 Score =  134 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 10/229 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKW 67
             A++LFSGG DS+ CL WA   +D V  L  +YG    +V         K++   +   
Sbjct: 2   KRAVVLFSGGLDSTACLYWAKKHYDEVMMLVINYGSNEERVTNRVAEFFSKELNVPLKIV 61

Query: 68  K-DSLGEDHILPLAIL--GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
           + D L E   L    L  G+    S+ +     +      + +VP RN++ +  AA+L  
Sbjct: 62  RLDFLEEFSKLRGTTLVGGETPRVSVKELEDENVAQETAKSVWVPARNLVLISVAASLLD 121

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            LG  +IV+G    +   +PD   + +  +  A+  G  + V V  PL+ L K    +L 
Sbjct: 122 ALGGGDIVVGFNAEEGVTFPDNTPEFVEKMNEALKYGTMAEVKVVAPLIDLDKRGIARLL 181

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
           +++  +       E S++CY+ K          C  C +C  R +G +E
Sbjct: 182 KELNAK------YEYSNSCYMPKGFTEDGKPIHCGQCESCVRRHRGLIE 224


>gi|323475431|gb|ADX86037.1| exsB protein [Sulfolobus islandicus REY15A]
          Length = 464

 Score =  134 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 84/229 (36%), Gaps = 18/229 (7%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +K    L++ SGG DS+   +  L     V  + F+Y   +    E      +KI E + 
Sbjct: 239 RKKHKVLVVASGGLDSTVAATKLLREGHEVTLIHFNY---HHKAEEREREAVRKIAEHLQ 295

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                +  D    +     I             +     + +VP RN+IF   A  +A  
Sbjct: 296 VPLIEINTDLFKMIGHATLIKGGGEIVKDRKGEEGAEFAHEWVPARNLIFFSAALAIAEA 355

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIR--AIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            G   I  G+   +   YPD   + IR  +  +    G    V V  P+  L K+E  KL
Sbjct: 356 YGYDAIASGINLEEAGAYPDNEMEFIRMLSKLSPYATGPNKKVEVLMPVGNLMKHEIVKL 415

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
             +IG        L  + +CY G +         C  C  CY+R+  + 
Sbjct: 416 GYEIGA------PLHLTWSCYEGGQK-------HCGKCGPCYMRRVAFK 451


>gi|91773251|ref|YP_565943.1| ATPase ExsB [Methanococcoides burtonii DSM 6242]
 gi|118574289|sp|Q12WI3|QUEC_METBU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|91712266|gb|ABE52193.1| Archaeosine biosynthesis protein [Methanococcoides burtonii DSM
           6242]
          Length = 233

 Score =  134 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 59/241 (24%), Positives = 102/241 (42%), Gaps = 38/241 (15%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWK 68
            ++LL S G DS   L+ ALD  D    L+FDYGQR+ K E+E    V +          
Sbjct: 2   RSILLLSSGLDSVAALAIALDNSDVFMALTFDYGQRSVKKEIEYSRMVCEHYG------- 54

Query: 69  DSLGEDHILPLAILGDISHSS--------------LTKNVAMKIQDNNLPNTFVPGRNII 114
               E  I+ L+ L  I+++S                 +    I +++  + +VP RN +
Sbjct: 55  ---IEHRIITLSWLSSITNTSLVNKDLDVPELSINDLIDGPDNITEDSAKSVWVPNRNGV 111

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
           F+  AA+ A   G   ++ G    +   +PD   + + A++   +    + V V  PL+ 
Sbjct: 112 FINIAASFAESHGCEYVIAGFNGEEAKTFPDNSKEFVNAVDECFSYSTANGVKVLAPLID 171

Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           + K    + A ++G        LE S +CY G  +        C  C +C  R++ ++  
Sbjct: 172 MDKVSIVRKAMELGA------PLEYSWSCYHGAEEP-------CGVCESCMRRKRAFLAS 218

Query: 235 K 235
            
Sbjct: 219 G 219


>gi|146303330|ref|YP_001190646.1| exsB protein [Metallosphaera sedula DSM 5348]
 gi|145701580|gb|ABP94722.1| exsB protein [Metallosphaera sedula DSM 5348]
          Length = 469

 Score =  134 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 53/240 (22%), Positives = 88/240 (36%), Gaps = 22/240 (9%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +    AL++ SGG DS+   +  +    +V  L F+Y   +    E      +KI   + 
Sbjct: 238 QPRRRALVIASGGLDSTVAATKMIREGYQVTLLHFNY---HHKAEEKEREAVRKIASYLN 294

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                +  D    +     +             +     + +VP RN IF   A  +A  
Sbjct: 295 ADLMEINTDLFSLIGNATLLKGGGEIVKDRKGEEGAEFAHEWVPARNAIFFTVAMAIAEA 354

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIET--AINLGMESHVTVHTPLMWLKKYETWKL 183
            G   IV G+   +   YPD   + +R  +      +G E  V V  P+  L K+E  KL
Sbjct: 355 KGYDAIVSGINLEEAGAYPDNEMEFVRMFQRLSPYAVGPEKRVDVLMPVGNLVKHEIVKL 414

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM----EFKEKYQ 239
             +IG        L  + +CY G           C  C  CY+R+  +     +   +Y+
Sbjct: 415 GLEIGA------PLHLTWSCYEGGEK-------HCGKCGPCYMRRVAFEINGVKDPVEYE 461


>gi|330721754|gb|EGG99746.1| Queuosine Biosynthesis QueC ATPase [gamma proteobacterium IMCC2047]
          Length = 203

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 60/214 (28%), Positives = 90/214 (42%), Gaps = 24/214 (11%)

Query: 27  WALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDIS 86
            A         +SF+YGQR   EL     + K +  +  +  +       + +  +G  +
Sbjct: 1   MAKASGADCYAISFNYGQRCNAELAAAERIVKSMGVIEHQVIN-------IDMGKIGGSA 53

Query: 87  HSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDC 146
            +  + +V     +      +VP RN +FL FA   A  +G   I IGV   DYSGYPDC
Sbjct: 54  LTDDSIDVPEDEPEGIPVT-YVPARNTVFLSFALGWAEVIGAQEIYIGVSAVDYSGYPDC 112

Query: 147 RHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESH 201
           R + I A E   NL  +       + + TPLM L K ET +    +G      +    + 
Sbjct: 113 RPEFIEAFEAMANLATKAGVEGESIKIQTPLMHLSKAETVQAGIQLG------VDYSLTV 166

Query: 202 TCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           +CY    D     G  C  C +C LR KG+ +  
Sbjct: 167 SCYQADDD-----GKACGKCDSCRLRIKGFEDAG 195


>gi|269215411|ref|ZP_06159265.1| ExsB protein [Slackia exigua ATCC 700122]
 gi|269130898|gb|EEZ61973.1| ExsB protein [Slackia exigua ATCC 700122]
          Length = 268

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 50/241 (20%), Positives = 84/241 (34%), Gaps = 23/241 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
              AL+L SGG DS+TCL+ A++RF    V T+SF YGQR++ EL+    V ++      
Sbjct: 31  PTRALVLSSGGIDSTTCLALAVERFSTANVSTVSFFYGQRHRKELDAAQAVAERYGVAHY 90

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII----FLVFAAT 121
               +    +     + G     +       K               ++      + A+ 
Sbjct: 91  VLDIASVLRYSDNALMAGSTQDVARGTYADQKDAAGRPNTYVPFRNGLMLSAAAALAASL 150

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
                    +     +     YPDC      A+  A+ +G   +VT+  P +   K    
Sbjct: 151 YPDEACAVYLGAHADDAAGDAYPDCSPAFTDAMSDAMRIGTYGNVTLEAPFVNDTKAGVV 210

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW----MEFKEK 237
               + G      +  E + +CY G           C +C  C  R   +     E   +
Sbjct: 211 ACGLERG------VPYELTWSCYEGGD-------VACGTCGTCLDRIAAFHANGAEDPIR 257

Query: 238 Y 238
           Y
Sbjct: 258 Y 258


>gi|282163370|ref|YP_003355755.1| archaeosine biosynthesis protein QueC [Methanocella paludicola
           SANAE]
 gi|282155684|dbj|BAI60772.1| archaeosine biosynthesis protein QueC [Methanocella paludicola
           SANAE]
          Length = 228

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/229 (23%), Positives = 88/229 (38%), Gaps = 17/229 (7%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKWKD 69
           +++L S G DS+     ALD F     L+FDYGQR   +E+E    + ++        + 
Sbjct: 4   SIVLLSSGLDSAVAFKMALDAFGVDLALTFDYGQRAADMEIESAKMICERFGVRHEVIEA 63

Query: 70  SLGEDHI---LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              ED     L        + S    +             +VP RN  F+  AA  A  L
Sbjct: 64  PWLEDVTLTALVNRGESVPTPSETELDEIKGKARETAHAVWVPNRNGAFINIAACFADAL 123

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            + +IV G    + + +PD     + AI  ++    E+H  V  P++ + K E  K    
Sbjct: 124 KVDHIVCGFNAEEGATFPDNTPAFVEAINKSLYYSTENHAKVIAPVIDMDKVEIIKKGMS 183

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           I      +  L+ S +CY+            C  C +C  R + +    
Sbjct: 184 I------DAPLDLSWSCYVSGEKP-------CGKCESCVRRARAFKRAG 219


>gi|21226855|ref|NP_632777.1| hypothetical protein MM_0753 [Methanosarcina mazei Go1]
 gi|74525901|sp|Q8PYU8|QUEC_METMA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|20905158|gb|AAM30449.1| conserved protein [Methanosarcina mazei Go1]
          Length = 231

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 62/234 (26%), Positives = 94/234 (40%), Gaps = 19/234 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWK 68
            A+ L S G DS   L+ A +  +    ++FDYGQR  + E+E    V +         K
Sbjct: 2   KAITLLSSGLDSVAALAIAAESLEIEMAITFDYGQRAGQREMEYSEKVCEHFGIEQRIIK 61

Query: 69  -DSLGEDHILPLAILGDISHS----SLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
            D LGE     L    +   S     + +N    I + +    +VP RN + L  A + A
Sbjct: 62  LDWLGEITHTSLVNRDEEVPSLSFEDIDENSPSMITEYSAKAVWVPNRNGVMLNIAGSFA 121

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              G   IV+G    +   +PD   D I+A++ A +   ++ V V  PL  + K E  K 
Sbjct: 122 ESRGCDYIVVGFNGEEAGTFPDNSRDYIQAVDNAFSYSTQNGVKVLAPLAEMGKTEIVKK 181

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           A +          LE S +CY G           C  C +C  R + +     K
Sbjct: 182 ALE------AEAPLEYSWSCYHGGE-------IPCGKCESCVRRARAFKNIGIK 222


>gi|227828356|ref|YP_002830136.1| exsB protein [Sulfolobus islandicus M.14.25]
 gi|229585586|ref|YP_002844088.1| exsB protein [Sulfolobus islandicus M.16.27]
 gi|238620549|ref|YP_002915375.1| exsB protein [Sulfolobus islandicus M.16.4]
 gi|227460152|gb|ACP38838.1| exsB protein [Sulfolobus islandicus M.14.25]
 gi|228020636|gb|ACP56043.1| exsB protein [Sulfolobus islandicus M.16.27]
 gi|238381619|gb|ACR42707.1| exsB protein [Sulfolobus islandicus M.16.4]
 gi|323478152|gb|ADX83390.1| exsB protein [Sulfolobus islandicus HVE10/4]
          Length = 464

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 84/229 (36%), Gaps = 18/229 (7%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +K    L++ SGG DS+   +  L     V  + F+Y   +    E      +KI E + 
Sbjct: 239 RKKHKVLVVASGGLDSTVAATKLLREGHEVTLIHFNY---HHKAEEREREAVRKIAEHLQ 295

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                +  D    +     I             +     + +VP RN+IF   A  +A  
Sbjct: 296 VPLIEINTDLFKMIGHATLIKGGGEIVKDRKGEEGAEFAHEWVPARNLIFFSAALAIAEA 355

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIR--AIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            G   I  G+   +   YPD   + IR  +  +    G    V V  P+  L K+E  KL
Sbjct: 356 YGYDAIASGINLEEAGAYPDNEMEFIRMLSKLSPYATGPNKKVEVLMPVGNLVKHEIVKL 415

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
             +IG        L  + +CY G +         C  C  CY+R+  + 
Sbjct: 416 GYEIGA------PLHLTWSCYEGGQK-------HCGKCGPCYMRRVAFK 451


>gi|229579998|ref|YP_002838398.1| exsB protein [Sulfolobus islandicus Y.G.57.14]
 gi|229581341|ref|YP_002839740.1| exsB protein [Sulfolobus islandicus Y.N.15.51]
 gi|284998612|ref|YP_003420380.1| exsB protein [Sulfolobus islandicus L.D.8.5]
 gi|228010714|gb|ACP46476.1| exsB protein [Sulfolobus islandicus Y.G.57.14]
 gi|228012057|gb|ACP47818.1| exsB protein [Sulfolobus islandicus Y.N.15.51]
 gi|284446508|gb|ADB88010.1| exsB protein [Sulfolobus islandicus L.D.8.5]
          Length = 464

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 84/229 (36%), Gaps = 18/229 (7%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +K    L++ SGG DS+   +  L     V  + F+Y   +    E      +KI E + 
Sbjct: 239 RKKHKVLVVASGGLDSTVAATKLLREGHEVTLIHFNY---HHKAEEREREAVRKIAEHLQ 295

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                +  D    +     I             +     + +VP RN+IF   A  +A  
Sbjct: 296 VPLIEINTDLFKMIGHATLIKGGGEIVKDRKGEEGAEFAHEWVPARNLIFFSAALAIAEA 355

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIR--AIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            G   I  G+   +   YPD   + IR  +  +    G    V V  P+  L K+E  KL
Sbjct: 356 YGYDAIASGINLEEAGAYPDNEMEFIRMLSKLSPYATGPNKKVEVLMPVGNLVKHEIVKL 415

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
             +IG        L  + +CY G +         C  C  CY+R+  + 
Sbjct: 416 GYEIGA------PLHLTWSCYEGGQK-------HCGKCGPCYMRRVAFK 451


>gi|317505473|ref|ZP_07963391.1| transcription regulator ExsB [Prevotella salivae DSM 15606]
 gi|315663386|gb|EFV03135.1| transcription regulator ExsB [Prevotella salivae DSM 15606]
          Length = 217

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 93/233 (39%), Gaps = 30/233 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKW 67
             ++++ SGG DS T L     + +    +SFDYG  +   E+       K++       
Sbjct: 2   KDSVIIVSGGMDSITLLYD--KKDEIALGISFDYGSNHNAKEIPFAEMHCKRLG------ 53

Query: 68  KDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                +   + L  +     SSL +           D N+ +T VP RN I L  A  +A
Sbjct: 54  ----IKHITINLDFMHQYFKSSLLQGAEAIPEGHYADENMKSTVVPFRNGIMLSIAIGIA 109

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
               +  ++I     D++ YPDCR   I+AI+ A N G   +V V  P   + K +  ++
Sbjct: 110 ESNQLKKVLIANHGGDHTIYPDCRPQFIQAIDAAANAGTFVNVRVEAPYTNITKGDIARI 169

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            + +G      L   E+ +CY G           C  C  C  R++   E   
Sbjct: 170 GKRLG------LDYTETWSCYKGGEK-------HCGKCGTCIERKEALQEAGI 209


>gi|14520309|ref|NP_125784.1| hypothetical protein PAB2286 [Pyrococcus abyssi GE5]
 gi|74548110|sp|Q9V2I3|QUEC_PYRAB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|5457524|emb|CAB49015.1| Hypothetical protein [Pyrococcus abyssi GE5]
          Length = 239

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 10/228 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKWK 68
            A++LFSGG DS+  L WAL  +D V  L+ +YG Q  +V  +      +++   +   K
Sbjct: 3   RAVVLFSGGLDSTASLYWALKHYDEVIMLTINYGSQEERVTNKVAEFFSRELNVPLKIVK 62

Query: 69  -DSLGEDHILPLAIL--GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            D L E   +  + L  G++   +  +    +       + ++P RN + +  AA+L   
Sbjct: 63  IDFLHEFSKIAGSKLVEGNVPEVTARELEDFEKAKETARSVWIPARNFVLIGVAASLLDA 122

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           LG  +I++G  + +   +PD   + +  I +A+     + V V  PL+ L K    +L +
Sbjct: 123 LGGGDIIVGFNKEEGETFPDNTKEFVDRINSALKYATMNEVRVVAPLIELDKKGIARLLK 182

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
           ++  +       E S++CY  +          C  C +C  R +G +E
Sbjct: 183 ELNAK------YEYSNSCYNPQGFTEDGKPIHCGRCESCVRRHRGLIE 224


>gi|331000424|ref|ZP_08324099.1| protein ExsB [Parasutterella excrementihominis YIT 11859]
 gi|329571756|gb|EGG53436.1| protein ExsB [Parasutterella excrementihominis YIT 11859]
          Length = 231

 Score =  133 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 86/236 (36%), Gaps = 21/236 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            A++L SGG DS+TCL+ A+     + V TLSF+YGQR+  ELE    V          +
Sbjct: 2   KAIVLSSGGVDSTTCLAMAVHELGKENVVTLSFEYGQRHCKELESAQKVADYYGVRHVVF 61

Query: 68  KD-SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA--- 123
               +       L           +    +        +T+VP RN + L   A LA   
Sbjct: 62  NLTQIFSFSNCSLLSTSTEKPVHESYAEQISKNGEGKVSTYVPFRNGLMLSAGAALAQSL 121

Query: 124 --YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
                    I     +   + Y DC      A++ AIN+G    V++  PL    K +  
Sbjct: 122 FPEEKCEIWIGAHADDAAGNAYADCSVGFNNAMDQAINIGTYGLVSLRAPLNRWNKAQVV 181

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
               ++       +  E + +CY G           C  C  C  R+  +     K
Sbjct: 182 AKGLEL------KVPYELTWSCYDGGEK-------ACGECGTCIDRKAAFEANGVK 224


>gi|260892492|ref|YP_003238589.1| exsB protein [Ammonifex degensii KC4]
 gi|260864633|gb|ACX51739.1| exsB protein [Ammonifex degensii KC4]
          Length = 219

 Score =  133 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 87/239 (36%), Gaps = 33/239 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +++L SGG DS+ CL+ A++  + V +L+FDYGQ    +                  + 
Sbjct: 2   KSVVLLSGGLDSAVCLACAVEDGEVVLSLTFDYGQAAAKKEI---------EAASKLSRH 52

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL-----------PNTFVPGRNIIFLVF 118
                 +L L  L ++   ++     M   +               + +VP RN +FL  
Sbjct: 53  YGVPHQVLHLPFLRELLPPAMASGEGMPEPETRELDDKVSADKLARSVWVPNRNALFLSI 112

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            A  A  LG   +V G    +   +PD     + A+   +       V V +    L K 
Sbjct: 113 GAAFAESLGAEAVVAGFNAEEAQSFPDNSPPFVDAMNEVLRYSTRGKVRVISYTQRLDKK 172

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
              +L + +G      L      +CY    +        C  CP+C    +   E +E+
Sbjct: 173 AIVRLGKRLG------LPFPFIWSCYRAGEEM-------CGRCPSCLRYFRALREAEEE 218


>gi|194333515|ref|YP_002015375.1| exsB protein [Prosthecochloris aestuarii DSM 271]
 gi|254764366|sp|B4S6H3|QUEC_PROA2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|194311333|gb|ACF45728.1| exsB protein [Prosthecochloris aestuarii DSM 271]
          Length = 226

 Score =  133 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 57/234 (24%), Positives = 86/234 (36%), Gaps = 29/234 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DS    + A      +  +  +YGQR            K+++        
Sbjct: 2   RAVVLLSGGMDSLVATAEADALGYELAAMHVNYGQRTWH---------KELMAFRAICDH 52

Query: 70  SLGEDHI-LPLAILGDISHSSLTKNVAMKIQDNNL----PNTFVPGRNIIFLVFAATLAY 124
                 + +    L  I  SSLT       + +      P ++VP RN  FL  A   + 
Sbjct: 53  YGIRHRLEVDADYLSAIGGSSLTDPSIPVEEADLHGATIPTSYVPFRNASFLSMAVAWSE 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWK 182
            +G   I IG  E D SGYPDCR     A    I LG      + + TPL+ L+K    +
Sbjct: 113 VIGAEKIYIGAVEEDSSGYPDCRKVFYDAFNRVIELGTRPETAIGIETPLIELQKSAIVR 172

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
               +       +    S +CY  +       G  C  C +C  R + +     
Sbjct: 173 RGIAL------QVPFRLSWSCYKSE-------GKACGHCDSCARRLRAFSLAGA 213


>gi|254512926|ref|ZP_05124992.1| exsB protein [Rhodobacteraceae bacterium KLH11]
 gi|221532925|gb|EEE35920.1| exsB protein [Rhodobacteraceae bacterium KLH11]
          Length = 232

 Score =  133 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 51/232 (21%), Positives = 81/232 (34%), Gaps = 29/232 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              L+ SGG DS +      ++ D    +SFDYGQR+  EL+       ++         
Sbjct: 2   KTTLVCSGGLDSVSLAHVLANQGDLSRLVSFDYGQRHTKELDFAAACATRLG-------- 53

Query: 70  SLGEDHILPLAI----LGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                H++ L      L   + +          ++  +  T VP RN I L  A  +A  
Sbjct: 54  --VPHHVIDLRSVGATLTGSALTDDLDVPDGHYEEETMKVTVVPNRNAIMLTIAYGIAAA 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAI--ETAINLGMESHVTVHTPLMWLKKYETWKL 183
                +   V   D+  YPDCR D   A        L   + V +H P +   K +    
Sbjct: 112 NKDDAVATAVHGGDHFIYPDCRPDFTDAFDAMQRAALDGYAEVALHVPFVHRAKADIVTE 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
                    VN   +++ +CY G           C  C  C  R++ +    
Sbjct: 172 GAR------VNTPFDQTWSCYKGGD-------LHCGRCGTCVERREAFDLAG 210


>gi|83953728|ref|ZP_00962449.1| hypothetical protein NAS141_05873 [Sulfitobacter sp. NAS-14.1]
 gi|83841673|gb|EAP80842.1| hypothetical protein NAS141_05873 [Sulfitobacter sp. NAS-14.1]
          Length = 233

 Score =  133 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/241 (22%), Positives = 89/241 (36%), Gaps = 33/241 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +++ SGG DS +       +      +SFDYGQR++ EL+      K++         
Sbjct: 2   KTIVICSGGLDSVSLAHMVAAKRKLTGLVSFDYGQRHRKELDYAALCAKRLD-------- 53

Query: 70  SLGEDHILPLAILG----DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 I+ +  +G      + +           +  +  T VP RN I L  A  +A  
Sbjct: 54  --VPHDIIDMRGIGAALTGSALTDDVDVPDGHYAEETMRVTVVPNRNAIMLTVAYGIAAA 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWKL 183
            G   +   V   D+  YPDCR D  +A E    + L   + V+++TP +   K +    
Sbjct: 112 RGDQAVATAVHGGDHFIYPDCRPDFTQAFEFMQYMALDGYADVSLYTPFVHRSKADIVTE 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQ 239
            Q        N    E+ +CY G           C  C  C  R++ +         +Y 
Sbjct: 172 GQRH------NTPFAETWSCYKGGVH-------HCGRCGTCVERREAFDLAGVTDPTQYD 218

Query: 240 D 240
           D
Sbjct: 219 D 219


>gi|327198316|ref|YP_004306890.1| QueC [Streptococcus phage Dp-1]
 gi|314912618|gb|ADT64009.1| QueC [Streptococcus phage Dp-1]
          Length = 228

 Score =  133 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 100/230 (43%), Gaps = 17/230 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            +++L SGG DS+TCL+  +D+     V  ++F+YGQ+++ ELE    V           
Sbjct: 2   KSVVLLSGGVDSATCLAIEVDKWGSKNVHAIAFNYGQKHEAELENAANVAMFYGVKFTIL 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +           ++L      S  K+ A  + +  + +T+VP RN + L  AA  AY +G
Sbjct: 62  EIDSKIYSSSSSSLLQGKGEISHGKSYAEILAEKEVVDTYVPFRNGLMLSQAAAYAYSVG 121

Query: 128 ITNIVI--GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            + +V      +     YPDC  +   ++  A+  G    VT+  PL+ L K +  K   
Sbjct: 122 ASYVVYGAHADDAAGGAYPDCTPEFYNSMSNAMEYGTGGKVTLVAPLLTLTKAQVVKWGI 181

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           D+      ++    + +CY    +        C +C  C  R+K + E  
Sbjct: 182 DL------DVPYFLTRSCYESDAES-------CGTCATCIDRKKAFEENG 218


>gi|325969442|ref|YP_004245634.1| exsB protein [Vulcanisaeta moutnovskia 768-28]
 gi|323708645|gb|ADY02132.1| exsB protein [Vulcanisaeta moutnovskia 768-28]
          Length = 495

 Score =  133 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 87/238 (36%), Gaps = 23/238 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               L++ SGG DS+T  ++ L +   V  L F+YG R + + +  +      +      
Sbjct: 251 KRRVLVIASGGLDSTTAATYLLKQGYDVALLHFNYGHRAETQEDRAIKR----IAEFHNV 306

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      +     +        V    +     + +VP RN +F+  A  +A   G
Sbjct: 307 PLFEVNMDFFKIVRHSPLLGDGEINRVDEGREGAEFAHEWVPARNFVFIALATAIAEAYG 366

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINL--GMESHVTVHTPLMWLKKYETWKLAQ 185
              I  G+   +   YPD   + IR +   +    G   HV +  P+  L K+E  +L  
Sbjct: 367 YDYIATGINLEESGAYPDNEMEFIRLLNRVMPYAVGPNKHVELIMPVGHLVKHEIVRLGL 426

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM----EFKEKYQ 239
           +      V+  L  + +CY             C  C  CY+R+  +     +   +Y+
Sbjct: 427 E------VDAPLHLTWSCYDNGEK-------HCGRCGPCYMRRLAFKINGVKDPVEYE 471


>gi|325914191|ref|ZP_08176544.1| preQ(0) biosynthesis protein QueC;transcriptional regulator
           [Xanthomonas vesicatoria ATCC 35937]
 gi|325539694|gb|EGD11337.1| preQ(0) biosynthesis protein QueC;transcriptional regulator
           [Xanthomonas vesicatoria ATCC 35937]
          Length = 213

 Score =  133 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 63/224 (28%), Positives = 95/224 (42%), Gaps = 25/224 (11%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS+  ++ A ++   V  LS  YGQR+  EL+    V         K  D       + 
Sbjct: 1   MDSAAVIALAQEQGFAVYALSVRYGQRHTSELDAAARVAAAQGVAAHKVVD-------VD 53

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
           L  +G  + +   +        + +P T+VP RN I L  A   A  +G  ++  GV   
Sbjct: 54  LRSIGGSALTDDIEVPDAG--GDGIPVTYVPARNTIMLSLALGWAEVVGANDLFCGVNAV 111

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKYETWKLAQDIGGQDLV 193
           DYSGYPDCR + +RA E   NL  ++ V      VH PL +L K +  +    +G     
Sbjct: 112 DYSGYPDCRPEFVRAFEVLANLATKAGVEGAGLRVHAPLQFLSKADIVREGVRLG----- 166

Query: 194 NLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            +    + +CY    D     G  C  C AC LR  G+ +   +
Sbjct: 167 -VDFGLTVSCYRADVD-----GRACGHCDACRLRAAGFADAGVQ 204


>gi|261417332|ref|YP_003251015.1| exsB protein [Fibrobacter succinogenes subsp. succinogenes S85]
 gi|261373788|gb|ACX76533.1| exsB protein [Fibrobacter succinogenes subsp. succinogenes S85]
 gi|302326040|gb|ADL25241.1| protein ExsB [Fibrobacter succinogenes subsp. succinogenes S85]
          Length = 217

 Score =  133 bits (333), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 88/230 (38%), Gaps = 22/230 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKW 67
             ALL+ SGG DS T L       D    +SFDYG  +   E+       +K+       
Sbjct: 2   KDALLVLSGGMDSVTLLYDRAA--DIALAVSFDYGSNHNDKEIPFARMHCEKLG------ 53

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +                S           D N+ +T VP RN I L  AA LA    
Sbjct: 54  IPHITIPLKFMHDYFTSSLLSGADAIPEGTYADENMKSTVVPFRNGIMLSVAAGLAESRD 113

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +++     D++ YPDCR + ++ +  AI+ G  +++T+  P   + K +  +  + +
Sbjct: 114 LKRVMMANHFGDHAIYPDCREEFVKNMSAAISAGTYANITIDAPYTNISKADIARKGKAL 173

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           G      L   E+ +CY G +         C  C  C  R+    E    
Sbjct: 174 G------LDYSETWSCYKGGK-------IHCGKCATCLERKAALAEAGIN 210


>gi|222082947|ref|YP_002542312.1| succinoglycan biosynthesis transcriptional regulator protein
           [Agrobacterium radiobacter K84]
 gi|254764294|sp|B9JLH9|QUEC_AGRRK RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|221727626|gb|ACM30715.1| succinoglycan biosynthesis transcriptional regulator protein
           [Agrobacterium radiobacter K84]
          Length = 236

 Score =  133 bits (333), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 83/237 (35%), Gaps = 25/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +++ SGG DS +           +  +SFDYGQR++ EL+      K++         
Sbjct: 2   KTIVVCSGGLDSVSLAHKVAAEQQLIGLVSFDYGQRHRKELDFAAACAKRLGVPHEIIDI 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +    H      L   + +           +  +  T VP RN I L  A  LA      
Sbjct: 62  TTIGKH------LTGSALTDDVDVPDGHYAEETMKATVVPNRNAIMLAIAFGLAAAQKAD 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLG--MESHVTVHTPLMWLKKYETWKLAQDI 187
            + + V   D+  YPDCR   I A +   N      + V+++ P +   K +        
Sbjct: 116 AVAVAVHGGDHFIYPDCRPGFIDAFQQMQNQALDGYASVSLYAPFVMTSKADIVTDGARH 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM----EFKEKYQD 240
                      E+ +CY G           C  C  C  R++ +     E    Y+D
Sbjct: 176 KT------PFAETWSCYKGGE-------RHCGRCGTCVERREAFHLAGVEDPTDYED 219


>gi|299142692|ref|ZP_07035822.1| ExsB protein [Prevotella oris C735]
 gi|298575907|gb|EFI47783.1| ExsB protein [Prevotella oris C735]
          Length = 217

 Score =  133 bits (333), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 55/234 (23%), Positives = 94/234 (40%), Gaps = 30/234 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKW 67
             ++++ SGG DS T L     + +    +SFDYG  +   E+       +++       
Sbjct: 2   KDSVIIVSGGMDSITLLYD--KKDEIALGISFDYGSNHNAKEIPFAEMHCRRLG------ 53

Query: 68  KDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                +   + L  +     SSL +           D+N+ +T VP RN I L  A  +A
Sbjct: 54  ----IKHITINLDFMHRYFKSSLLEGAEAIPEGHYADDNMKSTVVPFRNGIMLSIAIGIA 109

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
               +  ++I     D++ YPDCR + I+AI+ A   G   +  V  P   + K +  ++
Sbjct: 110 ESNNLKKVLIANHGGDHTIYPDCRPEFIKAIDAAAYAGTFVNTHVEAPYTNITKGDIARI 169

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            + +G      L   E+ +CY G           C  C  C  R++   E   K
Sbjct: 170 GKKLG------LDYTETWSCYKGGDK-------HCGKCGTCIERKEALAEAGIK 210


>gi|281425182|ref|ZP_06256095.1| ExsB protein [Prevotella oris F0302]
 gi|281400648|gb|EFB31479.1| ExsB protein [Prevotella oris F0302]
          Length = 217

 Score =  133 bits (333), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 30/234 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKW 67
             ++++ SGG DS T L     + +    +SFDYG  +   E+       +++       
Sbjct: 2   KDSVIIVSGGMDSITLLYD--KKDEIALGISFDYGSNHNAKEIPFAEMHCRRLG------ 53

Query: 68  KDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                +   + L  +     SSL +           D N+ +T VP RN I L  A  +A
Sbjct: 54  ----IKHITINLDFMHRYFKSSLLEGAEAIPEGHYADENMKSTVVPFRNGIMLSIAIGIA 109

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
               +  ++I     D++ YPDCR + I+AI+ A   G   +  V  P   + K +  ++
Sbjct: 110 ESNNLKKVLIANHGGDHTIYPDCRPEFIKAIDAAAYAGTFVNAHVEAPYTNITKGDIARI 169

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            + +G      L   E+ +CY G           C  C  C  R++   E   K
Sbjct: 170 GKQLG------LDYTETWSCYKGGDK-------HCGKCGTCVERKEALAEAGIK 210


>gi|303236575|ref|ZP_07323157.1| protein ExsB [Prevotella disiens FB035-09AN]
 gi|302483228|gb|EFL46241.1| protein ExsB [Prevotella disiens FB035-09AN]
          Length = 217

 Score =  133 bits (333), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 53/233 (22%), Positives = 92/233 (39%), Gaps = 30/233 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKW 67
             ++++ SGG DS T L            +SFDYGQ +   EL       K++       
Sbjct: 2   KDSIIIVSGGLDSITLLHQ--KANTIALAISFDYGQNHASKELPFAALHCKRLG------ 53

Query: 68  KDSLGEDHILPLAILGDISHSS----LTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                   ++PL  + +   SS      K      +++N+ +T VP RN I L  AA +A
Sbjct: 54  ----IRHIVIPLQFMHEYFKSSLLEGSEKIPEGHYEEDNMKSTVVPFRNGIMLAIAAGIA 109

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
               +  I I     D++ YPDCR + I A+  A   G  ++  +      + K +   +
Sbjct: 110 ESHHLNRIYIANHGGDHTIYPDCRPEFIDAMTAATQAGTFNNTRIEAAFTNITKADIVSI 169

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
              +G      +   E+ +CY        +  + C  C  C  R++ + +   
Sbjct: 170 GTKLG------IDYAETWSCYK-------DGNHHCGKCGTCVERKEAFQQAGI 209


>gi|303257911|ref|ZP_07343920.1| ExsB protein [Burkholderiales bacterium 1_1_47]
 gi|302859254|gb|EFL82336.1| ExsB protein [Burkholderiales bacterium 1_1_47]
          Length = 231

 Score =  133 bits (333), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 85/236 (36%), Gaps = 21/236 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            A++L SGG DS+TCL+ A+     + V TLSF+YGQR+  ELE    V          +
Sbjct: 2   KAIVLSSGGVDSTTCLAMAVHELGKENVVTLSFEYGQRHSKELEGAQKVADFYGVKHVVF 61

Query: 68  KD-SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA--- 123
               +       L           +    +        +T+VP RN + L   A LA   
Sbjct: 62  NLTQIFSFSNCSLLSNSTEKPVHESYADQIAKNGEGKVSTYVPFRNGLMLSAGAALAQSL 121

Query: 124 --YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
                    I     +   + Y DC      A+  AIN+G    V++  PL    K +  
Sbjct: 122 FPEEKCEIWIGAHADDAAGNAYADCSVGFNNAMNEAINIGTYGLVSLRAPLNRWNKAQVV 181

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
               ++       +  E + +CY G           C  C  C  R+  +     K
Sbjct: 182 AKGLEL------KVPYELTWSCYDGGEK-------ACGECGTCIDRKAAFEANGVK 224


>gi|83942508|ref|ZP_00954969.1| hypothetical protein EE36_15747 [Sulfitobacter sp. EE-36]
 gi|83846601|gb|EAP84477.1| hypothetical protein EE36_15747 [Sulfitobacter sp. EE-36]
          Length = 233

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 54/237 (22%), Positives = 85/237 (35%), Gaps = 25/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +++ SGG DS +              +SFDYGQR++ EL+      K++         
Sbjct: 2   KTIVICSGGLDSVSLAHMVAANRKLTGLVSFDYGQRHRKELDYAALCAKRLDVRHDIIDM 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     A L   + +           +  +  T VP RN I L  A  +A   G  
Sbjct: 62  RGIG------AALTGSALTDDVDVPDGHYAEETMRVTVVPNRNAIMLTVAYGIAAARGDQ 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            +   V   D+  YPDCR D  +A E    + L   + V+++TP +   K +     Q  
Sbjct: 116 AVATAVHGGDHFIYPDCRPDFTQAFEFMQYMALDGYADVSLYTPFVHRSKADIVTEGQRH 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQD 240
                 N    E+ +CY G           C  C  C  R++ +         +Y D
Sbjct: 176 ------NTPFAETWSCYKGGVH-------HCGRCGTCVERREAFDLAGVTDPTQYDD 219


>gi|326389108|ref|ZP_08210689.1| ExsB [Novosphingobium nitrogenifigens DSM 19370]
 gi|326206414|gb|EGD57250.1| ExsB [Novosphingobium nitrogenifigens DSM 19370]
          Length = 214

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 67/222 (30%), Positives = 102/222 (45%), Gaps = 28/222 (12%)

Query: 23  TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAIL 82
            C   A ++   V  L+FDY QR++VEL+    V  ++            E H++    L
Sbjct: 2   VCAGLAREQGFEVLALTFDYNQRHRVELDASRKVAARVG----------VERHVILPLDL 51

Query: 83  GDISHSSLTKNVAMKIQ--DNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDY 140
                S+LT ++A+        +P T+VP RN++FL  A   A   G ++I IGV   DY
Sbjct: 52  RQFGGSALTDDIAVPKDGVGEEIPVTYVPARNLVFLSLALAWAEAAGSSDIFIGVNALDY 111

Query: 141 SGYPDCRHDTIRAIETAINLGMES-----HVTVHTPLMWLKKYETWKLAQDIGGQDLVNL 195
           SGYPDCR + I   E    +  +      +V +H PL +LKK +  + A  +G +     
Sbjct: 112 SGYPDCRPEFIGGFEALARVATKFGDKGGNVKIHAPLQYLKKADIAREAVRLGLETG--- 168

Query: 196 ILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
              ES +CY          G  C  C +C LR+ G+ E   +
Sbjct: 169 ---ESWSCYDP-----LPDGRACGLCDSCRLRRAGFKEAGIE 202


>gi|313205278|ref|YP_004043935.1| exsb protein [Paludibacter propionicigenes WB4]
 gi|312444594|gb|ADQ80950.1| exsB protein [Paludibacter propionicigenes WB4]
          Length = 214

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 30/229 (13%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKW 67
              ++L+SGG DSS  L    DR  R   L+F+YG ++   E+E      K++       
Sbjct: 2   KDIVILYSGGMDSSVALYEHADRIRR--ALTFNYGSKHNLREMEYAARNCKRLG------ 53

Query: 68  KDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                E H++ L +      S L ++         +D N+  T VP RN I L  AA +A
Sbjct: 54  ----IEHHVIELDMNKMGFVSDLLQSGGDIPNGHYEDQNMIKTVVPFRNGIMLSIAAGIA 109

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +G   ++I     D++ YPDCR + I+ +  AI+LG  +H  +  P   L K E   +
Sbjct: 110 ESIGCDKLMISNHAGDHAIYPDCREEFIQTMNKAISLGTYNHCEILAPYTNLTKREIALI 169

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
            ++IG      +  E++++CY G           C +C  C  R++G  
Sbjct: 170 GKEIG------VPFEDTYSCYNGLE-------THCGTCGTCTERKEGLE 205


>gi|325967840|ref|YP_004244032.1| queuosine synthesis protein [Vulcanisaeta moutnovskia 768-28]
 gi|323707043|gb|ADY00530.1| Queuosine synthesis [Vulcanisaeta moutnovskia 768-28]
          Length = 235

 Score =  132 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 56/235 (23%), Positives = 86/235 (36%), Gaps = 28/235 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A+LL SGG DS+  L     R   V  +S +Y  R + E E    + K        
Sbjct: 1   MKKRAILLLSGGIDSAVALYLLKSRNYDVVAISINYPGRGERERESARILAK-------- 52

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +      + +  + +I      K    +   +  P+  +P RN I    AA  A  L
Sbjct: 53  --LTNTRLIEVDIPFMKEIVELWNNKEERPEHLRDAHPS-TIPARNAIIYAVAAYYAEIL 109

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAI----NLGMESHVTVHTPLMWLKKYETWK 182
           GI  IV G    D   +PD      + I  A+    ++G    + V  PL  L K E  K
Sbjct: 110 GINIIVAGHNADDTKYFPDTSRMFRKIISRALTIGTHIGKTKGLRVIAPLSKLNKTEVVK 169

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           L   +G      +  E + +C+         +   C  C  C  R++ + E   K
Sbjct: 170 LGLKLG------VPFEYTWSCHN-------NYDKPCGQCSGCLARKRAFDELGVK 211


>gi|188997266|ref|YP_001931517.1| exsB protein [Sulfurihydrogenibium sp. YO3AOP1]
 gi|254764388|sp|B2V5L9|QUEC_SULSY RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|188932333|gb|ACD66963.1| exsB protein [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 222

 Score =  132 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 96/237 (40%), Gaps = 30/237 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K  + ++L SGG DS+  L  +   F  V T+S+ YGQ++ +ELE    + K      
Sbjct: 1   MLKKENIIVLLSGGMDSAVLLWLSKTIFKDVYTISYSYGQKHSIELEYAKELSKIAG--- 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT---FVPGRNIIFLVFAAT 121
                 + E  I+ +  L  +  S+LT        +N         VP RN+IFL  AA+
Sbjct: 58  ------VKEHFIVEVPHLKQLKGSALTDENLEIPSENYPDEPPITTVPMRNLIFLSIAAS 111

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLK 176
            A    I NI IG+   D             A        +      + + + TP + + 
Sbjct: 112 FADVYEIENIGIGIHSLDSPYPDCRAEFASSAEAVINASSVMVAKKKNRIKIFTPFLGMS 171

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
           K +  KL +++G      +  E++++CY G           C  C  C  R++   E
Sbjct: 172 KTDIAKLGRELG------VPFEKTYSCYKGTVPP-------CGECATCRQREEALRE 215


>gi|116253991|ref|YP_769829.1| transcriptional regulator [Rhizobium leguminosarum bv. viciae 3841]
 gi|110816252|sp|Q1MBE0|QUEC_RHIL3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|115258639|emb|CAK09743.1| putative transcriptional regulator [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 236

 Score =  132 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 82/237 (34%), Gaps = 25/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +++ SGG DS T           +  +SFDYGQR++ EL+       ++         
Sbjct: 2   KTIVVCSGGLDSVTLAHKVAAEQQLIGLVSFDYGQRHRKELDFAARCASRLSVPHHIIDI 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +    H      L   + +   +       +  +  T VP RN I L  A  LA      
Sbjct: 62  AGIGGH------LSGSALTDNVEVPDGHYAEETMKATVVPNRNAIMLAIAFGLAAAQKAD 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLG--MESHVTVHTPLMWLKKYETWKLAQDI 187
            + + V   D+  YPDCR   I A +   N      + V +  P + + K       +  
Sbjct: 116 AVAVAVHGGDHFIYPDCRPGFIEAFQRMQNEALEGYASVKLLAPYVDVSKAAIVVDGEKH 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQD 240
           G          E+ +CY G           C  C  C  R++ +          Y+D
Sbjct: 176 GT------PFSETWSCYKGGEP-------HCGRCGTCVERREAFHLAGVPDPTAYED 219


>gi|254474583|ref|ZP_05087969.1| exsB protein [Ruegeria sp. R11]
 gi|214028826|gb|EEB69661.1| exsB protein [Ruegeria sp. R11]
          Length = 232

 Score =  132 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 53/241 (21%), Positives = 85/241 (35%), Gaps = 33/241 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L++ SGG DS +       +      +SFDYGQR++ EL+      +++         
Sbjct: 2   KTLVICSGGLDSVSLAHVLAAQGQLSRLVSFDYGQRHRKELDYAAACGQRLG-------- 53

Query: 70  SLGEDHILPLAI----LGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 I+ +      L   + +           +  +  T VP RN I L  A  +A  
Sbjct: 54  --VPHEIIDMRSIGAALSGSALTDDIDVPDGHYAEETMKVTVVPNRNAIMLTIAYGIAAA 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAI--ETAINLGMESHVTVHTPLMWLKKYETWKL 183
            G T +   V   D+  YPDCR     A      + L   + V++ TP +   K +    
Sbjct: 112 KGDTAVATAVHGGDHFIYPDCRPAFTDAFDAMQRMALDGYADVSLVTPFVHRSKGDIVAA 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK----YQ 239
                    VN    E+ +CY G           C  C  C  R++ +     +    Y 
Sbjct: 172 GAA------VNTPFAETWSCYKGGEH-------HCGRCGTCVERREAFDLAGVEDPTVYA 218

Query: 240 D 240
           D
Sbjct: 219 D 219


>gi|119873340|ref|YP_931347.1| ExsB family protein [Pyrobaculum islandicum DSM 4184]
 gi|119674748|gb|ABL89004.1| ExsB family protein [Pyrobaculum islandicum DSM 4184]
          Length = 276

 Score =  132 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 54/251 (21%), Positives = 96/251 (38%), Gaps = 24/251 (9%)

Query: 1   MNDIIK--KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           M  ++K  +   A+ + SGG DS+      L R   +  LSF YGQ+  VE+E    V +
Sbjct: 1   MATLVKPERPCRAVAVVSGGPDSTCYAVLWLKRGCDIHALSFLYGQKASVEVEKAQLVLR 60

Query: 59  KIVEL-MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           KI EL   +    + E  ++ L+ LG++   +   + ++ ++    P   VP RN++   
Sbjct: 61  KIDELAAARGWGRVVEHRVVNLSALGELWRGTQLTDSSLSVEREYTPTVVVPIRNVVMAA 120

Query: 118 FAATLAYRL----GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
            A   AY +    G    VI     D     +   +      +   +             
Sbjct: 121 VATAYAYTIRNFTGAKTYVIYGAHYDDIKPREDTWEPRYPDCSPECIEALQTAFRICHFR 180

Query: 174 WLKKYETWKLAQD---------IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPAC 224
             +  E W  +++         I  Q++ +LI E + +CY             C  C +C
Sbjct: 181 AERDVEIWTPSREGLKKSQLLKICHQEVGDLIYE-TWSCYKSGEA-------HCGECESC 232

Query: 225 YLRQKGWMEFK 235
             R   ++E  
Sbjct: 233 RNRHAAFIEAG 243


>gi|241206474|ref|YP_002977570.1| exsB protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240860364|gb|ACS58031.1| exsB protein [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 236

 Score =  132 bits (331), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 83/237 (35%), Gaps = 25/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +++ SGG DS T           +  +SFDYGQR++ EL+       ++         
Sbjct: 2   KTIVVCSGGLDSVTLAHKVAAEQQLIGLVSFDYGQRHRKELDFAARCASRLAVPYHIIDI 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +    H      L   + +   +       +  +  T VP RN I L  A  LA      
Sbjct: 62  ASIGGH------LSGSALTDNVEVPDGHYAEETMKATVVPNRNAIMLAIAFGLAAAQKAD 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLG--MESHVTVHTPLMWLKKYETWKLAQDI 187
            + + V   D+  YPDCR   I A +   N      ++V +  P +   K       +  
Sbjct: 116 AVAVAVHGGDHFIYPDCRPGFIDAFQHMQNEALDGYANVKLLAPYVDASKAAIVVDGEKH 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQD 240
           G          E+ +CY G           C  C  C  R++ +         +Y+D
Sbjct: 176 GT------PFSETWSCYKGGE-------LHCGRCGTCVERREAFHLAGVPDPTEYED 219


>gi|288928273|ref|ZP_06422120.1| ExsB protein [Prevotella sp. oral taxon 317 str. F0108]
 gi|288331107|gb|EFC69691.1| ExsB protein [Prevotella sp. oral taxon 317 str. F0108]
          Length = 217

 Score =  132 bits (331), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 56/234 (23%), Positives = 99/234 (42%), Gaps = 30/234 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMPKW 67
             ++++ SGG DS T L     + +    +SFDYG  +   EL       +++       
Sbjct: 2   KDSVIVVSGGMDSVTLLYE--KKDEIALGISFDYGSNHNHNELPLAALHCQRLG------ 53

Query: 68  KDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                   ++PL  +     SSL ++          + N+ +T VP RN + L  AA +A
Sbjct: 54  ----IAHVVIPLGFMHQYFKSSLLESGESIPDGSYDEENMKSTVVPFRNGVMLAVAAGIA 109

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              G+T ++I     D++ YPDCR + I A++ A+  G  + V V  P   + K +  + 
Sbjct: 110 ESNGLTKVLIANHGGDHTIYPDCRPEFIAAMDAAVEAGTFARVRVVAPYTNISKADIARR 169

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            + +G      +   E+ +CY G           C +C  C  R++   E   +
Sbjct: 170 GRALG------IDYAETWSCYKGGD-------VHCGTCGTCVERKEALREAGIE 210


>gi|327400840|ref|YP_004341679.1| exsB protein [Archaeoglobus veneficus SNP6]
 gi|327316348|gb|AEA46964.1| exsB protein [Archaeoglobus veneficus SNP6]
          Length = 211

 Score =  131 bits (330), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 19/226 (8%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKWKDS 70
           + + SGG DS   ++ AL        L+FDYGQ   K E+E    + K         +  
Sbjct: 4   VAVLSGGMDSGVAMAKALQEGSIELALTFDYGQMAAKKEIEYAGKLCKYYGVAHKVIELP 63

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
              +     + L +     +++ +   + +      +VP RN++F+  AA  A  +G   
Sbjct: 64  WLANL---SSGLTEGRIPEVSEEILEAVAEETAKAVWVPNRNMVFISIAAAFAESMGCNA 120

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V+G    +   +PD   + ++A+  A+ +   + V+V+ PL+ L K E  KL   +   
Sbjct: 121 VVVGFNGEEAQTFPDNSEEFVKAMNDALRI--VNGVSVYAPLIKLDKTEIVKLGMSM--- 175

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
              N   E + +CY       Y +   C  C +C  RQ+ +   ++
Sbjct: 176 ---NFPFELTWSCY-------YSYDEPCGKCESCVRRQRAFRALQK 211


>gi|150377058|ref|YP_001313654.1| exsB protein [Sinorhizobium medicae WSM419]
 gi|150031605|gb|ABR63721.1| exsB protein [Sinorhizobium medicae WSM419]
          Length = 236

 Score =  131 bits (330), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 52/237 (21%), Positives = 81/237 (34%), Gaps = 25/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +++ SGG DS +         + V  LSFDYGQR++ EL+      +++         
Sbjct: 2   KTIVICSGGLDSVSLAHKVAAEQELVCLLSFDYGQRHRKELDFAAVCARRLGVPHQIIDI 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                H      L   + +           +  +  T VP RN I L  A  +A      
Sbjct: 62  REIGRH------LTGSALTDEVDVPDGHYAEETMKTTVVPNRNAIMLAIAFGVAAARKAD 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            +   V   D+  YPDCR   I A +      L   + V ++ P + + K E        
Sbjct: 116 AVATAVHGGDHFIYPDCRPGFIDAFQAMQNHALDGYADVGLYAPYVNVAKAEIVADGSRY 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM----EFKEKYQD 240
           G          E+ +CY G           C  C  C  R++ +          Y D
Sbjct: 176 GT------PFAETWSCYKGG-------ARHCGRCGTCVERREAFHLADVADPTAYDD 219


>gi|109521761|ref|YP_655683.1| gp3 [Mycobacterium phage Qyrzula]
 gi|91980705|gb|ABE67423.1| gp3 [Mycobacterium phage Qyrzula]
          Length = 235

 Score =  131 bits (330), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 70/239 (29%), Positives = 99/239 (41%), Gaps = 32/239 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           L+L SGG DSST L+WALDR   DR   L  DYGQR+ VE      V +       +   
Sbjct: 8   LVLLSGGMDSSTLLAWALDRPDVDRASALFVDYGQRHVVERTSSQLVAQHYGAAWSE--- 64

Query: 70  SLGEDHILPLAILGDISHSSLT----KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  L L   G   +S+LT    +       ++N+  T VP RN   +  AA +A  
Sbjct: 65  -------LDLRAFGASVNSALTVMAREVPHGHYAEDNMVQTVVPNRNATLISAAAGIAAS 117

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           LG   ++  V   D++ YPDCR + + AI+ A   G    V V  P     K +  +L  
Sbjct: 118 LGHDAVLTAVHVGDHAVYPDCRPEFVAAIDMATFAGC--GVHVVAPFQTGDKADIARLGG 175

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQD 240
            +G      +    + +CY G           C  C  C  R + + E       +Y D
Sbjct: 176 QLG------VPYHLTWSCYEGG----LNDARHCGRCGTCVERAEAFAEAGVPDPTEYAD 224


>gi|195952408|ref|YP_002120698.1| exsB protein [Hydrogenobaculum sp. Y04AAS1]
 gi|195932020|gb|ACG56720.1| exsB protein [Hydrogenobaculum sp. Y04AAS1]
          Length = 216

 Score =  131 bits (330), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 22/226 (9%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           L+L SGG DS+T L  A  +F     +SFDYGQ++ VEL+    +   +          +
Sbjct: 5   LVLLSGGMDSATLLWEAKKKFKDAYAISFDYGQKHIVELKYAKELANMVGIKEH----FI 60

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
            +              S   K +  +    ++P T+VP RN+ FL  A+ +A  LGI NI
Sbjct: 61  VKIPHYKEINFHSPLLSVSKKEIPKESYQEDVPITYVPMRNLTFLAIASGIADELGIENI 120

Query: 132 VIGVCETDYSGYPDCRHDTIRAIE-----TAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I V   D             A       ++  +  +  + V+ P +   K +  KL + 
Sbjct: 121 GIAVHAVDAPYPDCRPEFITSAEAAINAGSSFVVKTKKRIYVYAPFLGFSKKDIAKLGKT 180

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
           +G      +  +++++CY G           C  C  C  R++   
Sbjct: 181 LG------VPFDKTYSCYEGTEPP-------CGECATCIQRKEALE 213


>gi|70606119|ref|YP_254989.1| hypothetical protein Saci_0280 [Sulfolobus acidocaldarius DSM 639]
 gi|110816268|sp|Q4JBY3|QUEC_SULAC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|68566767|gb|AAY79696.1| conserved protein [Sulfolobus acidocaldarius DSM 639]
          Length = 462

 Score =  131 bits (330), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 55/241 (22%), Positives = 89/241 (36%), Gaps = 23/241 (9%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K     L++ SGG DS+   ++ + +   V  L F+Y   +    E      +KI E + 
Sbjct: 237 KNKKRILVVASGGLDSTVAATYLVRQGHEVTLLHFNY---HHKAEEKEREAVRKISEYLN 293

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT-FVPGRNIIFLVFAATLAY 124
                +  D    +     I  SS       K ++       +VP RN+IF   A  +A 
Sbjct: 294 VPFVEIDTDLFKIVGHSTLIKGSSGEIVKDRKGEEGAEFAHEWVPARNLIFFSVALAMAE 353

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL--GMESHVTVHTPLMWLKKYETWK 182
             G   I  G+   +   YPD   + +R     +    G    V V  P+  L K+E  K
Sbjct: 354 AYGFDAIASGINLEEAGAYPDNEMEFVRMFSRLVPYAVGPNKKVEVLMPVGNLVKHEIVK 413

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM----EFKEKY 238
           L   I      +  L  + +CY G           C  C  CY+R+  +     +   +Y
Sbjct: 414 LGVQI------DAPLHLTWSCYEGGNK-------HCGKCGPCYMRKVAFEVNGLKDPVEY 460

Query: 239 Q 239
           +
Sbjct: 461 E 461


>gi|227831113|ref|YP_002832893.1| exsB protein [Sulfolobus islandicus L.S.2.15]
 gi|227457561|gb|ACP36248.1| exsB protein [Sulfolobus islandicus L.S.2.15]
          Length = 464

 Score =  131 bits (329), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 52/229 (22%), Positives = 83/229 (36%), Gaps = 18/229 (7%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +K    L++ SGG DS+   +  L     V  + F+Y   +    E      + I E + 
Sbjct: 239 RKKHKVLVVASGGLDSTVAATKLLREGHEVTLIHFNY---HHKAEEREREAVRNIAEHLQ 295

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                +  D    +     I             +     + +VP RN+IF   A  +A  
Sbjct: 296 VPLIEINTDLFKMIGHATLIKGGGEIVKDRKGEEGAEFAHEWVPARNLIFFSAALAIAEA 355

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIR--AIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            G   I  G+   +   YPD   + IR  +  +    G    V V  P+  L K+E  KL
Sbjct: 356 YGYDAIASGINLEEAGAYPDNEMEFIRMLSKLSPYATGPNKKVEVLMPVGNLVKHEIVKL 415

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
             +IG        L  + +CY G +         C  C  CY+R+  + 
Sbjct: 416 GYEIGA------PLHLTWSCYEGGQK-------HCGKCGPCYMRRVAFK 451


>gi|84489963|ref|YP_448195.1| ATPase [Methanosphaera stadtmanae DSM 3091]
 gi|110816234|sp|Q2NF51|QUEC_METST RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|84373282|gb|ABC57552.1| predicted ATPase [Methanosphaera stadtmanae DSM 3091]
          Length = 226

 Score =  131 bits (329), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 51/240 (21%), Positives = 101/240 (42%), Gaps = 36/240 (15%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMP 65
             P A+ + SGG DS+   S   +    +  ++F+YGQ++   EL+    + +K+     
Sbjct: 1   MKPKAITVLSGGLDSTVATSIYAND-YDITAITFNYGQQSIKQELKHAKMICEKLD---- 55

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL-----------PNTFVPGRNII 114
                  +  ++ L  L +IS+SSLT + ++    +N             + +VP RN +
Sbjct: 56  ------MKHIVIDLPWLKEISNSSLTTDKSIPQPSDNDLDDYDKSIETAKSVWVPARNTV 109

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
           F   A + A  +    I++G    +   +PD   + +++    I  G    + +  PL+ 
Sbjct: 110 FCSIALSYAESIQAKIIIVGWDYEEAVTFPDNSKEYLKSFNETIKYGSFDDIEIKAPLID 169

Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           + K +  K   +      VN  +  S++CY+G           C  C +C  R++ +   
Sbjct: 170 MTKEDIVKKGHE------VNAPMNISYSCYVGCD-------THCGVCESCKRRKRAFTRA 216


>gi|261880515|ref|ZP_06006942.1| transcription regulator ExsB [Prevotella bergensis DSM 17361]
 gi|270332737|gb|EFA43523.1| transcription regulator ExsB [Prevotella bergensis DSM 17361]
          Length = 242

 Score =  131 bits (329), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 59/236 (25%), Positives = 88/236 (37%), Gaps = 30/236 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMP 65
               A+++ SGG DS T L    DR      LSFDYG  +   E+       K++     
Sbjct: 24  NKRDAIIIVSGGMDSITMLYEFQDR--IALGLSFDYGSNHNAREIPYAEMHCKRLG---- 77

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                     I+PL  +     SSL +           +  + +T VP RN I L  AA 
Sbjct: 78  ------IPHIIIPLDFMSRYFKSSLLEGADAIPEGDYNEVGMKSTVVPFRNGIMLSIAAG 131

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           +A    +  I++     D+  YPDCR + IRA+  A   G    + +  P   + K +  
Sbjct: 132 MAESQNLKYIMMANHSGDHIIYPDCRPEFIRAMSKATQTGTFPGIKILAPYTDITKGDIA 191

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
              + +G      L   E+ +CY G           C  C  C  R     +   K
Sbjct: 192 CRGKALG------LDYTETWSCYKGGE-------RHCGKCGTCLERIAALKDAGIK 234


>gi|330959275|gb|EGH59535.1| exsB protein [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 187

 Score =  131 bits (329), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 59/193 (30%), Positives = 89/193 (46%), Gaps = 13/193 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+++      A++L SGG DS+T ++ A        T+SFDYGQR++ EL+    V + +
Sbjct: 1   MSELTMTEKRAVILLSGGLDSATVVAMARAEGYACYTMSFDYGQRHRAELDAAARVARDL 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  K          L L  +G  + +  +  V     +      +VP RN +FL  A 
Sbjct: 61  GAVEHKVIG-------LNLNGIGGSALTDSSIAVPEAPSEGIPVT-YVPARNTVFLSLAL 112

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWL 175
             A  LG  +I IGV   DYSGYPDCR + + + E   NL  +        T+  PL  L
Sbjct: 113 GWAEVLGARDIFIGVNAVDYSGYPDCRPEFVESFERTANLATKAGVEGQGFTIRAPLQNL 172

Query: 176 KKYETWKLAQDIG 188
            K +  K    +G
Sbjct: 173 SKSDIVKAGAALG 185


>gi|189039053|sp|A2CDY7|QUEC_PROM3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
          Length = 226

 Score =  131 bits (329), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 35/244 (14%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D      + + L SGG DS+T  + A++   +V  LSFDYGQR++ EL+    +   +
Sbjct: 1   MSDS-----TTIALLSGGLDSATAAALAIEAGQKVIGLSFDYGQRHRKELQAAEELAACM 55

Query: 61  VELMPKWKDSLGEDHIL--PLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLV 117
                     L E H++   L   G  S + LT+ V    + D  +PNT+VPGRN +F+ 
Sbjct: 56  G---------LTEHHVISVNLGSWGGSSLTDLTQTVPSEGVVDGVIPNTYVPGRNTVFIA 106

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPL 172
              +LA       +V+GV   DYSGYPDCR D ++A ++  +L  +       + +  PL
Sbjct: 107 IGLSLAEARHANRLVLGVNAMDYSGYPDCRPDYLKAYQSLADLANKAGREGHGIKLWAPL 166

Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
           M   K    + A  +G      + ++++ +CY G           C  C +C +R     
Sbjct: 167 MHWHKKRIVQEALRLG------VPIDKTWSCYSGGDH-------ACGICDSCRIRDAALS 213

Query: 233 EFKE 236
           E   
Sbjct: 214 EAGR 217


>gi|237755832|ref|ZP_04584430.1| ExsB protein [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691997|gb|EEP61007.1| ExsB protein [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 222

 Score =  131 bits (329), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 94/238 (39%), Gaps = 30/238 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K  + ++L SGG DS+  L  +   F  V  +S+ YGQ++ +ELE    + K      
Sbjct: 1   MLKKENIIVLLSGGMDSAVLLWLSKTMFKDVYAISYSYGQKHSIELEYAKELSKIAG--- 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT---FVPGRNIIFLVFAAT 121
                 + E  I+ +  L  +  ++LT        +N         VP RN+IFL  AA+
Sbjct: 58  ------VKEHFIVEVPHLKQLKGNALTDENLEIPSENYPDEPPITTVPMRNLIFLSIAAS 111

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLK 176
            A    I NI IG+   D             A        +      + + + TP + + 
Sbjct: 112 FADVYEIENIGIGIHSLDSPYPDCRAEFASSAEAVINASSVMVAKKKNRIKIFTPFLGMG 171

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           K +  KL +++G      +  E++++CY G           C  C  C  R+    E 
Sbjct: 172 KTDIAKLGRELG------VPFEKTYSCYKGTVPP-------CGECATCRQREDALREA 216


>gi|124024655|ref|YP_001018962.1| ATPase [Prochlorococcus marinus str. MIT 9303]
 gi|123964941|gb|ABM79697.1| hypothetical ATPase [Prochlorococcus marinus str. MIT 9303]
          Length = 229

 Score =  131 bits (329), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 69/242 (28%), Positives = 113/242 (46%), Gaps = 31/242 (12%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +   +  + + L SGG DS+T  + A++   +V  LSFDYGQR++ EL+    +   +  
Sbjct: 1   MASMSDSTTIALLSGGLDSATAAALAIEAGQKVIGLSFDYGQRHRKELQAAEELAACMG- 59

Query: 63  LMPKWKDSLGEDHIL--PLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFA 119
                   L E H++   L   G  S + LT+ V    + D  +PNT+VPGRN +F+   
Sbjct: 60  --------LTEHHVISVNLGSWGGSSLTDLTQTVPSEGVVDGVIPNTYVPGRNTVFIAIG 111

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMW 174
            +LA       +V+GV   DYSGYPDCR D ++A ++  +L  +       + +  PLM 
Sbjct: 112 LSLAEARHANRLVLGVNAMDYSGYPDCRPDYLKAYQSLADLANKAGREGHGIKLWAPLMH 171

Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
             K    + A  +G      + ++++ +CY G           C  C +C +R     E 
Sbjct: 172 WHKKRIVQEALRLG------VPIDKTWSCYSGGDH-------ACGICDSCRIRDAALSEA 218

Query: 235 KE 236
             
Sbjct: 219 GR 220


>gi|99081887|ref|YP_614041.1| ExsB [Ruegeria sp. TM1040]
 gi|118574293|sp|Q1GEY7|QUEC_SILST RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|99038167|gb|ABF64779.1| ExsB [Ruegeria sp. TM1040]
          Length = 233

 Score =  131 bits (329), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 52/237 (21%), Positives = 81/237 (34%), Gaps = 25/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L++ SGG DS +       ++     +SFDYGQR++ EL+       ++         
Sbjct: 2   KTLVICSGGLDSVSLAHITSQKYQLTRLVSFDYGQRHRKELDFARAAATRLGVPFHLIDM 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                       L   + +           ++ +  T VP RN I L     +A   G  
Sbjct: 62  RSIG------GALSGSALTDDIDVPDGHYAEDTMRITVVPNRNAIMLAIGFGVAAAQGDE 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            +   V   D+  YPDCR    RA E      L   + V +HTP +   K +  +     
Sbjct: 116 AVATAVHGGDHFIYPDCRPGFTRAFETMQRAALDGYADVRLHTPFVEQSKADIVRAGAAH 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM----EFKEKYQD 240
                 N    E+ +CY G           C  C  C  R++ +          Y D
Sbjct: 176 ------NTPFAETWSCYKGGD-------IHCGRCGTCVERREAFHLAEVADPTVYAD 219


>gi|307594719|ref|YP_003901036.1| exsB protein [Vulcanisaeta distributa DSM 14429]
 gi|307549920|gb|ADN49985.1| exsB protein [Vulcanisaeta distributa DSM 14429]
          Length = 496

 Score =  131 bits (329), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 51/230 (22%), Positives = 91/230 (39%), Gaps = 21/230 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR-LCVRKKIVELMPKWKD 69
            L++ SGG DS+T  ++ L +   V  L F+YG R + + +     + + +    P  + 
Sbjct: 255 VLVIASGGLDSTTAATYLLKQGYDVALLHFNYGHRAETQEDRAIRRIAEFLGV--PLLEV 312

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           S+    ++  + L           V    +     + +VP RN +F+  A  +A   G  
Sbjct: 313 SMDFFKVVRHSPL---LGDGEINRVDEGREGAEFAHEWVPARNFVFIALATAIAEAYGYD 369

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINL--GMESHVTVHTPLMWLKKYETWKLAQDI 187
            I  G+   +   YPD   + IR +   +    G   HV +  P+  L K+E  KL  ++
Sbjct: 370 YIATGINLEEAGAYPDNEMEFIRLLNKVMPYAVGPNKHVELLMPVGHLVKHEIVKLGLEV 429

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           G        L  + +CY             C  C  CY+R+  +     +
Sbjct: 430 GA------PLHLTWSCYDNGE-------RHCGRCGPCYMRRWAFRINGVR 466


>gi|29566196|ref|NP_817764.1| gp3 [Mycobacterium phage Rosebush]
 gi|29424921|gb|AAN01845.1| gp3 [Mycobacterium phage Rosebush]
          Length = 235

 Score =  131 bits (329), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 69/239 (28%), Positives = 99/239 (41%), Gaps = 32/239 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           L+L SGG DSST L+WALDR   D+   L  DYGQR+ VE      V +       +   
Sbjct: 8   LVLLSGGMDSSTLLAWALDRPDVDQASALFVDYGQRHVVERASSQLVAQHYGAAWSE--- 64

Query: 70  SLGEDHILPLAILGDISHSSLT----KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  L L   G   +S+LT    +       ++N+  T VP RN   +  AA +A  
Sbjct: 65  -------LDLRAFGASVNSALTVMAREVPHGHYAEDNMVQTVVPNRNATLISAAAGIAAS 117

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           LG   ++  V   D++ YPDCR + + AI+ A   G    V V  P     K +  +L  
Sbjct: 118 LGHDAVLTAVHVGDHAVYPDCRPEFVAAIDMATFAGC--GVHVVAPFQTGDKADIARLGG 175

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQD 240
            +G      +    + +CY G           C  C  C  R + + E       +Y D
Sbjct: 176 QLG------VPYHLTWSCYEGG----LNDARHCGRCGTCVERAEAFAEAGVPDPTEYAD 224


>gi|222149729|ref|YP_002550686.1| succinoglycan biosynthesis regulator [Agrobacterium vitis S4]
 gi|254764295|sp|B9JS46|QUEC_AGRVS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|221736711|gb|ACM37674.1| succinoglycan biosynthesis regulator [Agrobacterium vitis S4]
          Length = 235

 Score =  131 bits (329), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 52/241 (21%), Positives = 87/241 (36%), Gaps = 33/241 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L++ SGG DS +         + +  +SFDYGQR+K EL+      K++         
Sbjct: 2   KILVVCSGGLDSVSLADKMAAEHELIGLISFDYGQRHKKELDFAALAAKRLG-------- 53

Query: 70  SLGEDHILPLAILG----DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 I+ +  +G      + +           +  +  T VP RN I L  A  +A  
Sbjct: 54  --VPHQIIDMTNIGASLTGSALTDDLDVPDGHYAEETMKITVVPNRNAIMLAIAFGVAAA 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWKL 183
                + + V   D+  YPDCR   I A +   A  L   + V +  P + + K +    
Sbjct: 112 KKADAVALAVHGGDHFIYPDCRPGFIDAFQIMQAHALEGYADVKLLAPFVTVSKADIVTE 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQ 239
               G         +++ +CY G           C  C  C  R++ +          Y+
Sbjct: 172 GAKYGT------PFDQTWSCYKGG-------ARHCGRCGTCVERREAFHLAGVTDPTDYE 218

Query: 240 D 240
           D
Sbjct: 219 D 219


>gi|288799903|ref|ZP_06405362.1| ExsB protein [Prevotella sp. oral taxon 299 str. F0039]
 gi|288333151|gb|EFC71630.1| ExsB protein [Prevotella sp. oral taxon 299 str. F0039]
          Length = 222

 Score =  131 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 53/234 (22%), Positives = 95/234 (40%), Gaps = 30/234 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKW 67
             ++++ SGG DS T L     + +    +SF+YG  +   E+       + +       
Sbjct: 2   KDSIIIVSGGMDSITLLYD--KKDEIALGISFNYGSNHNNKEIPFAKMHCEHLG------ 53

Query: 68  KDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                +   + L  +     SSL +            +N+ +T VP RN I L  A  +A
Sbjct: 54  ----IQHITIDLDFMHQYFKSSLLEGAEKIPEGHYASDNMKSTVVPFRNGIMLSIAIGIA 109

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              G+  ++I     D++ YPDCR+D I A+  A   G   ++T+  P   + K +  K+
Sbjct: 110 ESNGLKKVLIANHGGDHTIYPDCRNDFIEAMNLASQAGTFVNITIEAPYTHITKGDIAKI 169

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            + +      ++   E+ +CY G+          C  C  C  R++   E   K
Sbjct: 170 GKKL------DINFAETWSCYKGEEH-------HCGVCGTCIERKEALQEAGIK 210


>gi|163738315|ref|ZP_02145730.1| ExsB [Phaeobacter gallaeciensis BS107]
 gi|161388236|gb|EDQ12590.1| ExsB [Phaeobacter gallaeciensis BS107]
          Length = 232

 Score =  131 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 52/241 (21%), Positives = 83/241 (34%), Gaps = 33/241 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L++ SGG DS +       +      +SFDYGQR++ EL+      +++         
Sbjct: 2   KTLVICSGGLDSVSLAHVLAAKGQLSRLVSFDYGQRHRKELDYAAACGQRLG-------- 53

Query: 70  SLGEDHILPLAI----LGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 I+ +      L   + +           +  +  T VP RN I L  A  +A  
Sbjct: 54  --VPHEIIDMRSIGAALSGSALTDDIDVPDGHYAEETMKVTVVPNRNAIMLTIAYGIAAA 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAI--ETAINLGMESHVTVHTPLMWLKKYETWKL 183
            G T +   V   D+  YPDCR     A      + L   + V + TP +   K +    
Sbjct: 112 KGDTAVATAVHGGDHFIYPDCRPAFTDAFDVMQRMALDGYADVALVTPFVHRSKGDIVAA 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK----YQ 239
                    V     E+ +CY G           C  C  C  R++ +     +    Y 
Sbjct: 172 GAA------VKTPFAETWSCYKGGEH-------HCGRCGTCVERREAFDLAGVEDPTVYA 218

Query: 240 D 240
           D
Sbjct: 219 D 219


>gi|86750585|ref|YP_487081.1| ExsB [Rhodopseudomonas palustris HaA2]
 gi|86573613|gb|ABD08170.1| ExsB [Rhodopseudomonas palustris HaA2]
          Length = 231

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 65/228 (28%), Positives = 96/228 (42%), Gaps = 20/228 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               L+L SGG DS+TCL  A      V +L  DYGQR  VE+       +K        
Sbjct: 24  RKKVLVLHSGGMDSTTCLLQAKAEGHDVASLGIDYGQRLLVEMMFAEGQCEK-------- 75

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                  H++ +          L ++V      +++   F+PGRNI+FL      A  +G
Sbjct: 76  --YSIPRHVINVNWQKAERQIPLNRSVEE--MAHSVSPAFLPGRNIVFLGLGHAHAAGIG 131

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              + IG+   D+SGYPDC      +  T +N+G      +  PL+ + K E  +LA  +
Sbjct: 132 ADELQIGLNCVDFSGYPDCTTQFYDSYCTMLNIGNPGGPKLVAPLLKMSKPEIARLASTL 191

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           G Q        ++ +CY      R      C  C AC L +  W E K
Sbjct: 192 GLQ------RNDTWSCYRP--QIREGSIVACGECDACKLHEFAWQELK 231


>gi|260912184|ref|ZP_05918738.1| transcription regulator ExsB [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260633711|gb|EEX51847.1| transcription regulator ExsB [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 217

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 59/240 (24%), Positives = 102/240 (42%), Gaps = 34/240 (14%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMPKW 67
             ++++ SGG DS T L     + +    +SFDYG  +   EL       +++       
Sbjct: 2   KDSVIVVSGGMDSITLLYE--KKDEIALGISFDYGSNHNHNELPLAALHCQRLG------ 53

Query: 68  KDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                   ++PL  +     SSL ++          ++N+ +T VP RN I L  AA +A
Sbjct: 54  ----IAHVVIPLGFMHQYFKSSLLESGANIPDGSYDEDNMKSTVVPFRNGIMLAVAAGIA 109

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              G+T ++I     D++ YPDCR + I A++ A+  G  ++V V  P   + K +  + 
Sbjct: 110 ESNGLTKVLIANHGGDHTIYPDCRPEFIAAMDAAVKAGTFANVHVVAPYTNISKADIARK 169

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQ 239
              +G      +   E+ +CY G           C +C  C  R++   E       KY+
Sbjct: 170 GSFLG------IDYAETWSCYKGGD-------VHCGTCGTCVERKEALREAGITDNTKYE 216


>gi|256827670|ref|YP_003151629.1| exsB protein [Cryptobacterium curtum DSM 15641]
 gi|256583813|gb|ACU94947.1| exsB protein [Cryptobacterium curtum DSM 15641]
          Length = 240

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 65/234 (27%), Positives = 99/234 (42%), Gaps = 21/234 (8%)

Query: 11  ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           AL+L SGG DS+TCL+ A+DRF    V T+SF YGQR+  EL+    V +    +     
Sbjct: 15  ALVLSSGGVDSTTCLALAVDRFGQANVSTVSFFYGQRHSRELDAAAAVAEHYG-VHHYVL 73

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL-- 126
           D     H    A++   +      + A +++D+  PNT+VP RN + L  AA LA  L  
Sbjct: 74  DLASVMHYSNNALMATSTQHVPHGSYAQQMEDDGHPNTYVPFRNGLMLSAAAALAASLFP 133

Query: 127 ---GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
                  +     +   + YPDC       +  AI+ G   +V + TP +   K +    
Sbjct: 134 DTSCALYLGAHADDAAGNAYPDCSPAFTAHMGRAISFGTYGNVRLETPFVNQNKAQVVAE 193

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
              +G      +  E + +CY G           C +C  C  R   +     K
Sbjct: 194 GLRLG------VPYEMTWSCYEGGEKP-------CGTCATCLDRIAAFEANGVK 234


>gi|182412683|ref|YP_001817749.1| exsB protein [Opitutus terrae PB90-1]
 gi|177839897|gb|ACB74149.1| exsB protein [Opitutus terrae PB90-1]
          Length = 220

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 49/218 (22%), Positives = 78/218 (35%), Gaps = 20/218 (9%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKWKDSLGEDHIL 77
            DS T L WA         +SFDYG ++   EL        ++                 
Sbjct: 1   MDSVTALYWAAREHHVSAVVSFDYGSKHNPKELPFAAEHAARLGARHEVI------HLDF 54

Query: 78  PLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCE 137
              +                 +  N+  T VP RN I L  A  LA  +G   +VI    
Sbjct: 55  VNRLFASALLQRGGAIPDGHYEAENMKQTVVPFRNAILLSIACGLAESVGAEGLVIAAHG 114

Query: 138 TDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLIL 197
            D++ YPDCR + +RA+  A+ LG  + + +  P +   K +       +G      +  
Sbjct: 115 GDHAIYPDCREEFMRAMGEAMALGTYAGIRLLRPFIAKNKAQIAAEGARLG------VDF 168

Query: 198 EESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
             + +CY G           C +C  C  R++ + E  
Sbjct: 169 ARTWSCYKGG-------PVHCGTCGTCVERREAFAEAG 199


>gi|52549865|gb|AAU83714.1| transcriptional regulator [uncultured archaeon GZfos33E1]
          Length = 231

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/234 (21%), Positives = 86/234 (36%), Gaps = 16/234 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A+ + SGG DS+   + A +    +      YGQR +   +  +      +     
Sbjct: 1   MTKIAVCVCSGGIDSTVTATIASEEGYELHLFHASYGQRAEAREKEVVAKLASYLNANEL 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               L     L  + L D+     T       ++   P+T+VP RNII L  A+  A  +
Sbjct: 61  KFAELPFLKELGGSSLTDLKRRIPTGEEVNLEEEKETPSTWVPCRNIILLANASAFAEVI 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIE---TAINLGMESHVTVHTPLMWLKKYETWKL 183
               I +G    +   YPD   + +                   V  PL+ L K E  K 
Sbjct: 121 SADAIFVGFNAEEARSYPDNEKEFVDRYNAVLEKAVASYCPPPEVKAPLVDLLKPEIIKK 180

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
             +      V   L+ +++CYLG++         C  C +C  R++G+ +   +
Sbjct: 181 GVE------VKAPLQLTYSCYLGEKK-------HCGICESCQHRRRGFKDAGVE 221


>gi|260585060|ref|ZP_05852802.1| ExsB protein [Granulicatella elegans ATCC 700633]
 gi|260157256|gb|EEW92330.1| ExsB protein [Granulicatella elegans ATCC 700633]
          Length = 214

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/226 (26%), Positives = 92/226 (40%), Gaps = 20/226 (8%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMPKWKDS 70
           L+L SGG DSST LS AL +  +VE +SF Y Q++K  ELE    +         K    
Sbjct: 3   LVLLSGGVDSSTALSLALSQDPQVEAISFSYNQKHKELELEAARKIAAYY-----KVPHQ 57

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           + E   +       ++  +  +            NT V  RN IF+   A +A + G + 
Sbjct: 58  ILEVSSIFSGSKSSLNAGNDIEVSTGDYATQTEANTEVEFRNGIFISILAGIAMQKGASE 117

Query: 131 IVIGVC-ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
           I  G   +     YPDC  + I A+  A+ LG    V +  P   +KK +      ++G 
Sbjct: 118 IYFGAHLDDSGVIYPDCSPEFIEAMNQAVQLGSGGKVRLTAPFGQVKKKDIVAKGVELG- 176

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
                +  E +++CY G           C  C  C  R K ++   
Sbjct: 177 -----VPYELTYSCYNGVYPP-------CGKCGTCIDRNKAFLANG 210


>gi|34419359|ref|NP_899372.1| exsB protein [Vibrio phage KVP40]
 gi|34333040|gb|AAQ64195.1| exsB protein [Vibrio phage KVP40]
          Length = 238

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 57/237 (24%), Positives = 95/237 (40%), Gaps = 31/237 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             + + SGG DS+      +D F  D V  LSF YGQ+  +ELE      +K+       
Sbjct: 2   KVVSVLSGGLDSTILTYKLVDEFGKDNVFALSFYYGQKQSIELEKAKLTCQKLG------ 55

Query: 68  KDSLGEDHILPLAILGD--------ISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                E  ++ ++ LG+        I+ S +       +  +  P T VP RN++    A
Sbjct: 56  ----IEHRLIDISFLGEVVAPVCANIAGSDVAMPTIQDVLGDPQPPTEVPYRNMLLNTIA 111

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            + A   G + +  G+   D  GY DC  D +  +     L  +  +T+H P   + K +
Sbjct: 112 FSFAQANGCSAVFTGIQVHDAYGYWDCTQDFLDGMNKISALNRQHEITLHAPFAQMSKAD 171

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
              +  ++G      +  E+S TCY          G  C  CP+C  R   + +   
Sbjct: 172 EIAIGVELG------VPFEDSLTCYDPNEA-----GESCGKCPSCAERIMNFGKAGI 217


>gi|20092990|ref|NP_619065.1| succinoglycan biosynthesis regulator [Methanosarcina acetivorans
           C2A]
 gi|74527841|sp|Q8TIF3|QUEC_METAC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|19918307|gb|AAM07545.1| succinoglycan biosynthesis regulator [Methanosarcina acetivorans
           C2A]
          Length = 231

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 56/244 (22%), Positives = 94/244 (38%), Gaps = 39/244 (15%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWK 68
            A+ L S G DS   L+ A +  +    ++FDYGQR  + E+E    V +          
Sbjct: 2   KAITLLSSGLDSVAALAIAAESLEIEMAITFDYGQRAGQREIEYSRKVCEHYG------- 54

Query: 69  DSLGEDHILPLAILGDISHS---------------SLTKNVAMKIQDNNLPNTFVPGRNI 113
               E  ++ L  L  I+++                + +     I + +    +VP RN 
Sbjct: 55  ---IEHIVIKLDWLAGITNTSLVNRGEDVPALSFEDIDEAAPAAITEASAKAVWVPNRNG 111

Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
           + L  A + A       +V+G    +   +PD     + A++ A +   ++ V V  PL+
Sbjct: 112 VMLNIAGSFAESRDCDYLVVGFNGEEAGTFPDNSMAYVEAMDNAFSYSTQNGVRVLAPLI 171

Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
            L K E  K A +      V   LE S +CY G+          C  C +C  R + +  
Sbjct: 172 ELGKTEIVKKALE------VKAPLEYSWSCYHGEETP-------CGGCESCVRRARAFKN 218

Query: 234 FKEK 237
              K
Sbjct: 219 TGTK 222


>gi|83951569|ref|ZP_00960301.1| ExsB [Roseovarius nubinhibens ISM]
 gi|83836575|gb|EAP75872.1| ExsB [Roseovarius nubinhibens ISM]
          Length = 233

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 49/237 (20%), Positives = 80/237 (33%), Gaps = 25/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L++ SGG DS +              +SFDYGQR++ EL+       ++         
Sbjct: 2   KTLVICSGGLDSVSLAHKVAAEQTLTRLVSFDYGQRHRKELDFAARAADRLGVPFHLIDM 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     A+L   + +           + ++  T VP RN I L  A  LA   G  
Sbjct: 62  RGIG------AVLTGSALTDDVPVPDGHYTEASMAATVVPNRNAIMLSVAFGLATAQGDE 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            +   V   D+  YPDCR    ++ +      L   ++V ++TP +   K          
Sbjct: 116 AVATAVHGGDHFIYPDCRPGFAKSFQAMQNHALDGYANVFLYTPFIDAPKSAIVTEGARH 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQD 240
                      ++ +CY G           C  C  C  R++ +          Y D
Sbjct: 176 HT------PFADTWSCYKGGD-------MHCGRCGTCVERREAFDLAGVADPTAYAD 219


>gi|163742268|ref|ZP_02149656.1| hypothetical protein RG210_03618 [Phaeobacter gallaeciensis 2.10]
 gi|161384598|gb|EDQ08979.1| hypothetical protein RG210_03618 [Phaeobacter gallaeciensis 2.10]
          Length = 232

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 52/241 (21%), Positives = 84/241 (34%), Gaps = 33/241 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L++ SGG DS +       +      +SFDYGQR++ EL+      +++         
Sbjct: 2   KTLVICSGGLDSVSLAHVLAAKGQLSRLVSFDYGQRHRKELDYAAACGQRLG-------- 53

Query: 70  SLGEDHILPLAI----LGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 I+ +      L   + +           +  +  T VP RN I L  A  +A  
Sbjct: 54  --VPHEIIDMRSIGAALSGSALTDDIDVPDGHYAEETMKVTVVPNRNAIMLTIAYGIAAA 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAI--ETAINLGMESHVTVHTPLMWLKKYETWKL 183
            G T +   V   D+  YPDCR     A      + L   + V + TP +   K +    
Sbjct: 112 KGDTAVATAVHGGDHFIYPDCRPAFTDAFDVMQRMALDGYADVALVTPFVHRSKGDIVTA 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK----YQ 239
                    V     E+ +CY G         + C  C  C  R++ +     +    Y 
Sbjct: 172 GAA------VKTPFAETWSCYKGG-------AHHCGRCGTCVERREAFDLAGVEDPTVYA 218

Query: 240 D 240
           D
Sbjct: 219 D 219


>gi|42523689|ref|NP_969069.1| succinoglycan biosynthesis regulator [Bdellovibrio bacteriovorus
           HD100]
 gi|81617090|sp|Q6MKZ5|QUEC_BDEBA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|39575896|emb|CAE80062.1| succinoglycan biosynthesis regulator [Bdellovibrio bacteriovorus
           HD100]
          Length = 231

 Score =  130 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 55/244 (22%), Positives = 89/244 (36%), Gaps = 37/244 (15%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDR-VETLSFDYGQR-NKVELECRLCVRKKIVE 62
           +KK    ++L S G DS+     A+      V  L+F+YGQR  K ELE    + K +  
Sbjct: 1   MKKNKKVVVLLSAGLDSTVNAYEAIKHHHEIVLALTFNYGQRAAKKELEASANIAKHLG- 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVA------------MKIQDNNLPNTFVPG 110
                        ++ L    D + SSL                  +  +    + +VP 
Sbjct: 60  ---------IPHKVVELPWFKDFNKSSLLVEDQAVPTGSAVEIDNQQKSEETAKSVWVPN 110

Query: 111 RNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT 170
           RN IFL  AA  A  LG   ++ G    + + +PD   + +     ++     +HVTV  
Sbjct: 111 RNGIFLNIAAAYAEALGADAVIPGFNAEEAATFPDNSREFLEQATKSLWYSTSNHVTVGC 170

Query: 171 PLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
               LKK +  +L Q       + +  E    CY             C  C +C   ++ 
Sbjct: 171 YTAHLKKPDIVRLGQ------GLKVPWELIWPCYFSGDKW-------CGQCESCLRSKRA 217

Query: 231 WMEF 234
           +   
Sbjct: 218 FASA 221


>gi|118431467|ref|NP_147964.2| hypothetical protein APE_1470.1 [Aeropyrum pernix K1]
 gi|150421640|sp|Q9YBY0|QUEC_AERPE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|116062792|dbj|BAA80468.2| conserved hypothetical protein [Aeropyrum pernix K1]
          Length = 269

 Score =  130 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 101/253 (39%), Gaps = 35/253 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM-PKWK 68
            A+ + SGG DS T     L R   V  LSF+YGQ+   E+     + +K  EL   +  
Sbjct: 5   RAVSIVSGGPDSFTYTLIWLSRGCSVHALSFNYGQKASREVLTARKLLEKADELASERGW 64

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             + E  ++ ++ +  +   +   +  ++++++  P+  VP RN++ L  AA  AY L  
Sbjct: 65  GRVLEHRLVDISFMKSLWRGTQLTDEEVEVKEDYAPSVVVPIRNVVMLSIAAAYAYSLLE 124

Query: 129 TNIVIGVCETDYSG--------------YPDCRHDTIRAIETAINLGMESHVTVHTPLM- 173
              V  V  T  +               YPDC  + I A++ A  L     +        
Sbjct: 125 EEDVDRVVVTYGAQRGDIKPRPDTGEPLYPDCSPECIEALQAAFRLCHFRGMRRLEVWSP 184

Query: 174 ---WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
               L K +  K A        V  ++ ++ +CYL  +       Y C  C +C  R + 
Sbjct: 185 SREGLSKSDLLKWA-----YGTVGKLIYDTWSCYLNGK-------YHCGRCESCINRHRA 232

Query: 231 WMEFK----EKYQ 239
           + +       +Y+
Sbjct: 233 FKDAGLPDCTRYE 245


>gi|110816207|sp|Q2IUE0|QUEC2_RHOP2 RecName: Full=7-cyano-7-deazaguanine synthase 2; AltName:
           Full=7-cyano-7-carbaguanine synthase 2; AltName:
           Full=PreQ(0) synthase 2; AltName: Full=Queuosine
           biosynthesis protein queC 2
          Length = 210

 Score =  130 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 65/228 (28%), Positives = 96/228 (42%), Gaps = 20/228 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               L+L SGG DS+TCL  A      V +L  DYGQR  VE+       +K        
Sbjct: 3   RKKVLVLHSGGMDSTTCLLQAKAEGHDVASLGIDYGQRLLVEMMFAEGQCEK-------- 54

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                  H++ +          L ++V      +++   F+PGRNI+FL      A  +G
Sbjct: 55  --YSIPRHVINVNWQKAERQIPLNRSVEE--MAHSVSPAFLPGRNIVFLGLGHAHAAGIG 110

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              + IG+   D+SGYPDC      +  T +N+G      +  PL+ + K E  +LA  +
Sbjct: 111 ADELQIGLNCVDFSGYPDCTTQFYDSYCTMLNIGNPGGPKLVAPLLKMSKPEIARLASTL 170

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           G Q        ++ +CY      R      C  C AC L +  W E K
Sbjct: 171 GLQ------RNDTWSCYRP--QIREGSIVACGECDACKLHEFAWQELK 210


>gi|298675033|ref|YP_003726783.1| exsB protein [Methanohalobium evestigatum Z-7303]
 gi|298288021|gb|ADI73987.1| exsB protein [Methanohalobium evestigatum Z-7303]
          Length = 235

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 54/233 (23%), Positives = 92/233 (39%), Gaps = 19/233 (8%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKWKD 69
           A+ L S G DS   L+ A +  D    + FDYGQR  K E+E    +           K 
Sbjct: 3   AISLLSSGLDSVAALTIAREITDVKLAIIFDYGQRSAKKEIEYSKKICTHFGIDYEVIKL 62

Query: 70  SLGE-----DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              E       +     + +++   ++   A +  + +  N +VP RN IFL  +A  A 
Sbjct: 63  DWLEKITNTSLVNKKEDVPELTLDDVSGKNATEKTEESAKNVWVPNRNGIFLNISAGFAE 122

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            L    +++G    +   +PD   + + ++ T ++    + V +  PL+   K +    A
Sbjct: 123 SLECEYVIVGFNSEEGQTFPDNSPEFVDSMNTCLSYSTRNGVKILAPLVDYNKKDIINQA 182

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
              G        LE S +CY G+          C  C +C  R+  + E   K
Sbjct: 183 LKSGT------PLEWSWSCYHGRD-------LPCGVCESCIRRKHAFNELGIK 222


>gi|332716136|ref|YP_004443602.1| succinoglycan biosynthesis regulator [Agrobacterium sp. H13-3]
 gi|325062821|gb|ADY66511.1| succinoglycan biosynthesis regulator [Agrobacterium sp. H13-3]
          Length = 236

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 55/241 (22%), Positives = 88/241 (36%), Gaps = 33/241 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +++ SGG DS +         + +  +SFDYGQR+K EL+      K++         
Sbjct: 2   KTIVICSGGLDSVSLAHKIAAEHELLALVSFDYGQRHKKELDFAADCAKRLG-------- 53

Query: 70  SLGEDHILPLAILG----DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                H++ +  +G      + +           +  + +T VP RN I L  A  LA  
Sbjct: 54  --VPHHVIDITTIGAHLTGSALTDDIDVPDGHYAEETMRSTVVPNRNAIMLTIAFGLAAA 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWKL 183
                + I V   D+  YPDCR   I +     A  L   + VT+  P + + K      
Sbjct: 112 QQADAVAIAVHGGDHFIYPDCRPGFIDSFNAMQAHALEGYADVTLFAPYVTVSKAAIVTD 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQ 239
           A   G          E+ +CY G           C  C  C  R++ +          Y+
Sbjct: 172 AVKYGT------PFGETWSCYKGG-------SRHCGRCGTCVERREAFHLAGVTDPTDYE 218

Query: 240 D 240
           D
Sbjct: 219 D 219


>gi|220926070|ref|YP_002501372.1| exsB protein [Methylobacterium nodulans ORS 2060]
 gi|219950677|gb|ACL61069.1| exsB protein [Methylobacterium nodulans ORS 2060]
          Length = 251

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 80/228 (35%), Positives = 103/228 (45%), Gaps = 12/228 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL++ SGGQDS+TCL WA  +FD V  L+FDYGQR+  ELE  + V K       +   
Sbjct: 3   RALVVLSGGQDSTTCLFWAKQQFDEVHALTFDYGQRHARELEAAVTVAKMAGVASHEVLK 62

Query: 70  SLGEDHIL-PLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                    PL   G       +     +   + +  TFVP RN +FL  AA  A  L  
Sbjct: 63  LPDLLRSTSPLVDPGAALEQYASYEQMEETIGDRVELTFVPMRNALFLTIAANRAVALDC 122

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLG-MESHVTVHTPLMWLKKYETWKLAQDI 187
            N+V GVC+ D + YPDCR D + A +  IN         +HTPLM L K ET KLA  +
Sbjct: 123 FNLVTGVCQQDNANYPDCRLDFVLAQQGTINQALGVGRFRIHTPLMHLTKAETVKLAGSL 182

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            G       L  SHT Y G                   LR +G+ +  
Sbjct: 183 PGC---WEALAYSHTAYDGAYPPTGRDHAT-------LLRAEGFRQAG 220


>gi|239832974|ref|ZP_04681303.1| exsB protein [Ochrobactrum intermedium LMG 3301]
 gi|239825241|gb|EEQ96809.1| exsB protein [Ochrobactrum intermedium LMG 3301]
          Length = 232

 Score =  129 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 82/237 (34%), Gaps = 25/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L++ SGG DS +              LSFDYGQR++ EL+      +++         
Sbjct: 2   KTLVVCSGGLDSVSLAYRIAGEHQLTALLSFDYGQRHRKELDSAKACAERLGAPHQIIDI 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     A L   + +           +  +  T VP RN I L  A  +A      
Sbjct: 62  RTIG------ASLTGSALTDDVDVPDGHYAEETMKITVVPNRNAIMLAIAFGVAAAQKAD 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH--TPLMWLKKYETWKLAQDI 187
            + + V   D+  YPDCR   I A +T  N  ++ +  +    P + + K +        
Sbjct: 116 AVALAVHGGDHFIYPDCRPGFIDAFQTMQNHALDGYADIKLLAPYVHVSKADIVIDGAKY 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK----YQD 240
           G           + +CY G           C  C  C  R++ +     +    Y+D
Sbjct: 176 GT------PFAATWSCYKGGEH-------HCGRCGTCVERREAFHLAGIEDPTLYED 219


>gi|171185720|ref|YP_001794639.1| ExsB family protein [Thermoproteus neutrophilus V24Sta]
 gi|170934932|gb|ACB40193.1| ExsB family protein [Thermoproteus neutrophilus V24Sta]
          Length = 275

 Score =  129 bits (323), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 53/243 (21%), Positives = 92/243 (37%), Gaps = 22/243 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL-MP 65
           K   A+ + SGG DS+   S  L R   V  LSF YGQ+  VE+E    + +KI EL   
Sbjct: 9   KPCRAVAVVSGGPDSTCYASLWLRRGCDVHALSFLYGQKAAVEVEKAQVLLRKIDELAAA 68

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +    + E  ++ L+ LG +   +   + A+ ++    P   VP RN++    A   AY 
Sbjct: 69  RGWGRVVEHRVVDLSALGSLWRGTQLTDAALAVEKEYTPTVVVPIRNVVMAAVATAYAYT 128

Query: 126 L----GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           +    G    V+     D         + +    +   +               +  E W
Sbjct: 129 IRSATGAKTYVVYGAHYDDVKPRKDTWEPLYPDCSPECVEALQTAFRICHFRAERDVEIW 188

Query: 182 KLAQD---------IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
             +++         +  +++ +LI E + +CY             C  C +C  R   +M
Sbjct: 189 TPSREGLKKSQLLKMCHEEIGDLIYE-TWSCYKSGEA-------HCGECESCRNRHAAFM 240

Query: 233 EFK 235
           E  
Sbjct: 241 EAG 243


>gi|56698569|ref|YP_168945.1| ExsB [Ruegeria pomeroyi DSS-3]
 gi|81348746|sp|Q5LM13|QUEC_SILPO RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|56680306|gb|AAV96972.1| ExsB [Ruegeria pomeroyi DSS-3]
          Length = 230

 Score =  129 bits (323), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 52/237 (21%), Positives = 82/237 (34%), Gaps = 25/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L++ SGG DS +         D +  +SFDYGQR++ EL+       ++         
Sbjct: 2   KTLVICSGGLDSVSLAHKVAAEHDLIGLISFDYGQRHRKELDFAARAATRLGVPHDLIDM 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                H      L   + +           ++ +  T VP RN I L  A  +A      
Sbjct: 62  RQIGAH------LSGSALTDDVDVPDGHYAEDTMKITVVPNRNAIMLAIAFGIAAAKQAD 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            +   V   D+  YPDCR    +A E   A  L   + V ++TP +   K       +  
Sbjct: 116 AVATAVHGGDHFIYPDCRPGFTQAFEAMQAQALDGYASVRLYTPFVHEPKSAIVTEGERH 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQD 240
                 N    ++ +CY G           C  C  C  R++ +          Y D
Sbjct: 176 ------NTPFADTWSCYKGGE-------VHCGRCGTCVERREAFHLAGVADPTPYAD 219


>gi|15891587|ref|NP_357259.1| succinoglycan biosynthesis regulator [Agrobacterium tumefaciens
           str. C58]
 gi|81489986|sp|Q8UAM7|QUEC_AGRT5 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|15160023|gb|AAK90044.1| succinoglycan biosynthesis regulator [Agrobacterium tumefaciens
           str. C58]
          Length = 236

 Score =  128 bits (322), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 85/237 (35%), Gaps = 25/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +++ SGG DS +         + +  +SFDYGQR+K EL+      K++         
Sbjct: 2   KTIVICSGGLDSVSLAHKIAAEHELLALVSFDYGQRHKKELDFAADCAKRLGVPHHLIDI 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                H      L   + +           +  + +T VP RN I L  A  LA      
Sbjct: 62  GTIGAH------LTGSALTDDIDVPDGHYAEETMRSTVVPNRNAIMLTIAFGLAAAQQAD 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            + I V   D+  YPDCR   I +     A  L   + VT+  P + + K      A   
Sbjct: 116 AVAIAVHGGDHFIYPDCRPGFIGSFNAMQAHALEGYADVTLFAPYVTVSKAAIVTDAVKY 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQD 240
           G          E+ +CY G           C  C  C  R++ +         +Y+D
Sbjct: 176 GT------PFGETWSCYKGG-------LRHCGRCGTCVERREAFHLAGVTDPTEYED 219


>gi|153008345|ref|YP_001369560.1| exsB protein [Ochrobactrum anthropi ATCC 49188]
 gi|167016440|sp|A6WXM7|QUEC_OCHA4 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|151560233|gb|ABS13731.1| exsB protein [Ochrobactrum anthropi ATCC 49188]
          Length = 232

 Score =  128 bits (322), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 52/241 (21%), Positives = 84/241 (34%), Gaps = 33/241 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L++ SGG DS +              LSFDYGQR+K EL+      +++         
Sbjct: 2   KTLVVCSGGLDSVSLAYRIASEHQLTALLSFDYGQRHKKELDSAKACAERLG-------- 53

Query: 70  SLGEDHILPLAILG----DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 I+ +  +G      + +           +  +  T VP RN I L  A  +A  
Sbjct: 54  --VPHQIIDITNIGASLTGSALTDDIDVPDGHYAEETMKITVVPNRNAIMLAIAFGVAAA 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH--TPLMWLKKYETWKL 183
                I + V   D+  YPDCR   I A +T  N  ++ +  +    P +   K +    
Sbjct: 112 QKAEAIALAVHGGDHFIYPDCRPGFIDAFQTMQNHALDGYADIKLLAPYVHASKADIVID 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK----YQ 239
               G           + +CY G           C  C  C  R++ +     +    Y+
Sbjct: 172 GAKHGA------PFAATWSCYKGGEH-------HCGRCGTCVERREAFHLAGVEDPTLYE 218

Query: 240 D 240
           D
Sbjct: 219 D 219


>gi|190893557|ref|YP_001980099.1| succinoglycan biosynthesis transcriptional regulator protein
           [Rhizobium etli CIAT 652]
 gi|254764371|sp|B3Q0Y0|QUEC_RHIE6 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|190698836|gb|ACE92921.1| succinoglycan biosynthesis transcriptional regulator protein
           [Rhizobium etli CIAT 652]
          Length = 236

 Score =  128 bits (322), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 82/237 (34%), Gaps = 25/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +++ SGG DS +           +  +SFDYGQR++ EL+       ++         
Sbjct: 2   KTIVVCSGGLDSVSLAHKMAAEQQLIGLVSFDYGQRHRKELDFAARCAARLAVPHHIIDI 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +    H      L   + +   +       +  +  T VP RN I L  A  LA      
Sbjct: 62  AAIGGH------LSGSALTDNVEVPDGHYAEETMKATVVPNRNAIMLAIAFGLAAAQKAD 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLG--MESHVTVHTPLMWLKKYETWKLAQDI 187
            + + V   D+  YPDCR   I A +   N      + V +  P + + K       +  
Sbjct: 116 AVAVAVHGGDHFIYPDCRPGFIDAFQRMQNAALDGYASVRLLAPYVDVSKAAIVADGEKH 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQD 240
                      E+ +CY G R         C  C  C  R++ +          Y+D
Sbjct: 176 AT------PFAETWSCYKGGR-------LHCGRCGTCVERREAFHLAGISDPTDYED 219


>gi|149916375|ref|ZP_01904895.1| hypothetical protein RAZWK3B_12312 [Roseobacter sp. AzwK-3b]
 gi|149809829|gb|EDM69681.1| hypothetical protein RAZWK3B_12312 [Roseobacter sp. AzwK-3b]
          Length = 230

 Score =  128 bits (322), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 49/229 (21%), Positives = 78/229 (34%), Gaps = 21/229 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +++ SGG DS +         +    LSFDYGQR+  EL+      +++         
Sbjct: 2   KTIVICSGGLDSVSLAHKVAAEHELAGLLSFDYGQRHAKELDFAARCAERLGVAHRVVDL 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     A L   + +           +  +  T VP RN I L     +A      
Sbjct: 62  RAVG------AALTGSALTDDLDVPDGHYAEETMKITVVPNRNAIMLAVGFGMAAAQKAD 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            +   V   D+  YPDCR D I A +      L   + V ++TP +   K +        
Sbjct: 116 AVATAVHGGDHFIYPDCRPDFIAAFQAMEDHALDGVAKVQLYTPFVTGSKADIVTEGARH 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           G         E++ +CY G           C  C  C  R++ +     
Sbjct: 176 GT------PFEDTWSCYKGGE-------VHCGRCGTCVERREAFHLAGI 211


>gi|148240805|ref|YP_001226192.1| PP-loop superfamily ATPase [Synechococcus sp. WH 7803]
 gi|189029541|sp|A5GPN0|QUEC_SYNPW RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|147849344|emb|CAK24895.1| Predicted PP-loop superfamily ATPase [Synechococcus sp. WH 7803]
          Length = 229

 Score =  128 bits (322), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 21/237 (8%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +      +A+ L SGG DS+T  + A +   RV  LSFDYGQR++ EL+           
Sbjct: 1   MPSMTDSTAIALLSGGLDSATAAALAQEAGCRVIGLSFDYGQRHRRELQ---------AA 51

Query: 63  LMPKWKDSLGEDHIL--PLAILGDISHSSLTKNVAMK-IQDNNLPNTFVPGRNIIFLVFA 119
                  +L E H +   LA  G  S +   + + +  +QD  +P+T+VPGRN +F+   
Sbjct: 52  AAIAEALNLAEHHTISVNLASWGGSSLTDSAQALPVDGVQDGVIPSTYVPGRNTVFISIG 111

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            +LA   G   +V+GV   DYSGYPDCR D + A +T  +L  +       P +W    E
Sbjct: 112 LSLAEARGADRLVLGVNAVDYSGYPDCRPDYLDAFQTLADLSSKVGREGRGPRLWAPLVE 171

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            W   + +     + + +E S +CY G           C  C +C +R         
Sbjct: 172 -WSKQKIVEEALRLGVPIERSWSCYSGGDHP-------CGVCDSCRIRDAALQAAGR 220


>gi|16264811|ref|NP_437603.1| hypothetical protein SM_b20940 [Sinorhizobium meliloti 1021]
 gi|307308043|ref|ZP_07587761.1| exsB protein [Sinorhizobium meliloti BL225C]
 gi|307319888|ref|ZP_07599311.1| exsB protein [Sinorhizobium meliloti AK83]
 gi|81811844|sp|Q92UN9|QUEC_RHIME RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|15140949|emb|CAC49463.1| probable succinoglycan biosynthesis regulator [Sinorhizobium
           meliloti 1021]
 gi|306894428|gb|EFN25191.1| exsB protein [Sinorhizobium meliloti AK83]
 gi|306901447|gb|EFN32051.1| exsB protein [Sinorhizobium meliloti BL225C]
          Length = 236

 Score =  128 bits (321), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 48/237 (20%), Positives = 80/237 (33%), Gaps = 25/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +++ SGG DS +         +    LSFDYGQR++ EL+      +++         
Sbjct: 2   KTIVICSGGLDSVSLAHKVAAEQELSGLLSFDYGQRHRKELDFAAACARRLGVPHQIIDI 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                       L   + +           +  +  T VP RN I L  A  +A      
Sbjct: 62  REIGRR------LTGSALTDEVDVPDGHYAEETMKATVVPNRNAIMLAIAFGVAAARKAD 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            +   V   D+  YPDCR   I A +      L   + V ++ P + + K +        
Sbjct: 116 AVATAVHGGDHFIYPDCRPGFIDAFQAMQDHALDGYADVALYAPFVNVSKADIVADGARH 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQD 240
                 +    E+ +CY G           C  C  C  R++ +         +Y D
Sbjct: 176 ------DTPFAETWSCYKGG-------ARHCGRCGTCVERREAFHLAGVPDPTEYDD 219


>gi|86359301|ref|YP_471193.1| succinoglycan biosynthesis transcriptional regulator protein
           [Rhizobium etli CFN 42]
 gi|110816251|sp|Q2K3X0|QUEC_RHIEC RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|86283403|gb|ABC92466.1| succinoglycan biosynthesis transcriptional regulator protein
           [Rhizobium etli CFN 42]
          Length = 236

 Score =  128 bits (321), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 82/237 (34%), Gaps = 25/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +++ SGG DS +           +  +SFDYGQR++ EL+       ++         
Sbjct: 2   KTIVVCSGGLDSVSLAHRTASEEQLIGLVSFDYGQRHRKELDFAAKCAARLAVPHHIIDI 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +    H      L   + +   +       +  +  T VP RN I L  A  LA      
Sbjct: 62  AAIGGH------LSGSALTDNVEVPDGHYAEETMKATVVPNRNAIMLAIAFGLAAAQKAD 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLG--MESHVTVHTPLMWLKKYETWKLAQDI 187
            + + V   D+  YPDCR   I A +   N      + V +  P + + K          
Sbjct: 116 AVAVAVHGGDHFIYPDCRPGFIDAFQRMQNEALDGYASVKLLAPYVEVSKAAIVADGTRH 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQD 240
           G          E+ +CY G           C  C  C  R++ +         +Y+D
Sbjct: 176 GT------PFAETWSCYKGG-------SLHCGRCGTCVERREAFHLAGVSDPTEYED 219


>gi|260463747|ref|ZP_05811945.1| exsB protein [Mesorhizobium opportunistum WSM2075]
 gi|319785231|ref|YP_004144707.1| exsB protein [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|259030601|gb|EEW31879.1| exsB protein [Mesorhizobium opportunistum WSM2075]
 gi|317171119|gb|ADV14657.1| exsB protein [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 232

 Score =  128 bits (321), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 51/241 (21%), Positives = 88/241 (36%), Gaps = 33/241 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L++ SGG DS +         +    LSFDYGQR+  EL+      +++         
Sbjct: 2   KTLVICSGGLDSVSLAHKVAAEHELAGLLSFDYGQRHSKELKFATLCAQRLD-------- 53

Query: 70  SLGEDHILPLAILG----DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 I+ +  +G      + +           ++ +  T VP RN I L  A  LA  
Sbjct: 54  --IAHQIIDIRQIGRGLCGSALTDGVDVPDGHYAEDTMKITVVPNRNAIMLAIAFGLAAA 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG--MESHVTVHTPLMWLKKYETWKL 183
             +  + +     D+  YPDCR   I A +T  +     ++ + ++TP + L K +    
Sbjct: 112 QQLEAVGMAAHGGDHFIYPDCRPAFIEAFQTMQDRALDGDAQIRLYTPYVNLTKADIVGD 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM----EFKEKYQ 239
               G          ++ +CY G           C  C  C  R++ +          Y+
Sbjct: 172 GARHGT------PFAQTWSCYKGGE-------RHCGRCGTCVERREAFQLAQHADPTDYE 218

Query: 240 D 240
           D
Sbjct: 219 D 219


>gi|13474826|ref|NP_106396.1| succinoglycan biosynthesis regulator (exsB) [Mesorhizobium loti
           MAFF303099]
 gi|81777975|sp|Q98AZ0|QUEC1_RHILO RecName: Full=7-cyano-7-deazaguanine synthase 1; AltName:
           Full=7-cyano-7-carbaguanine synthase 1; AltName:
           Full=PreQ(0) synthase 1; AltName: Full=Queuosine
           biosynthesis protein queC 1
 gi|14025582|dbj|BAB52182.1| succinoglycan biosynthesis regulator; ExsB [Mesorhizobium loti
           MAFF303099]
          Length = 232

 Score =  128 bits (321), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 51/236 (21%), Positives = 81/236 (34%), Gaps = 25/236 (10%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL++ SGG DS +           +  LSFDYGQR+K EL       K++          
Sbjct: 3   ALVICSGGLDSVSLAHKVATEQKLIGLLSFDYGQRHKKELGFAAICAKRLAVPHQIVDIR 62

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                      L   + +           ++++  T VP RN I L  A  +A       
Sbjct: 63  DVG------RNLSGSALTDNVDVPDGHYAEDSMRITVVPNRNAIMLAIAFGVAAAKKADA 116

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
           +   V   D+  YPDCR   I A +      L   + + ++ P + + K +         
Sbjct: 117 VATAVHGGDHFIYPDCRPAFIDAFQTMQNHALAGYADIRLYAPYVNMSKADIVSEGAKYA 176

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQD 240
                    E + +CY G           C  C  C  R++ +          Y+D
Sbjct: 177 T------PFEATWSCYKGG-------ARHCGRCGTCVERREAFDLAGITDPTDYED 219


>gi|209551069|ref|YP_002282986.1| exsB protein [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|254764372|sp|B5ZR38|QUEC_RHILW RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|209536825|gb|ACI56760.1| exsB protein [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 236

 Score =  128 bits (320), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 83/237 (35%), Gaps = 25/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +++ SGG DS +           +  +SFDYGQR++ EL+       ++         
Sbjct: 2   RTIVVCSGGLDSVSLAHKIAAEQQLIGLVSFDYGQRHRKELDFAARCAARLAVPHHIIDI 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           S    H      L   + +   +       +  +  T VP RN I L  A  LA      
Sbjct: 62  SAIGGH------LSGSALTDDIEVPDGHYAEETMKATVVPNRNAIMLAIAFGLAAAQKAD 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLG--MESHVTVHTPLMWLKKYETWKLAQDI 187
            + + V   D+  YPDCR   I A +   N      + V +  P + + K       +  
Sbjct: 116 AVAVAVHGGDHFIYPDCRPGFIDAFQRMQNEALDGYASVRLLAPYVEVSKAAIVTDGEKH 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQD 240
                      E+ +CY G R         C  C  C  R++ +         +Y+D
Sbjct: 176 AT------PFAETWSCYKGGR-------LHCGRCGTCVERREAFHLAGIPDPTEYED 219


>gi|149203606|ref|ZP_01880575.1| hypothetical protein RTM1035_06058 [Roseovarius sp. TM1035]
 gi|149142723|gb|EDM30765.1| hypothetical protein RTM1035_06058 [Roseovarius sp. TM1035]
          Length = 232

 Score =  128 bits (320), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 81/237 (34%), Gaps = 25/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +++ SGG DS +         +    LSFDYGQR+  E+E      +++         
Sbjct: 2   RTIVICSGGLDSVSLAHKVAAEHELAGLLSFDYGQRHVKEVEYAAACARRLGVPHKVVDI 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     A L   + +           +  +  T VP RN I L  A  +A      
Sbjct: 62  RQIG------AALSGSALTDDVAVPDGHYAEETMKITIVPNRNAIMLAIAFGMAAAEKAD 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            +   V   D+  YPDCR   I A +      L   + V ++TP +   K +        
Sbjct: 116 AVATAVHGGDHFIYPDCRPGFINAFQAMQDAALEGYAEVKLYTPYLQGSKGDIVTDGAKH 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQD 240
           G          E+ +CY G           C  C  C  R++ +         +Y+D
Sbjct: 176 GT------PFAETWSCYKGG-------AKHCGRCGTCVERREAFHLAGVVDPTEYED 219


>gi|18313078|ref|NP_559745.1| hypothetical protein PAE2074 [Pyrobaculum aerophilum str. IM2]
 gi|74563624|sp|Q8ZVX7|QUEC_PYRAE RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|18160584|gb|AAL63927.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2]
          Length = 269

 Score =  128 bits (320), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 96/246 (39%), Gaps = 22/246 (8%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI-VE 62
           I++K    + + SGG DS+   +  L R   V  LSF YGQ+  VE+E    + +++   
Sbjct: 2   IVEKPCRVVAVVSGGPDSTCYTALWLKRGCDVHALSFLYGQKAVVEVERAQLLLRRLDGI 61

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
              +    + E  ++ L+ LG++   +   + ++ ++ +  P   VP RN++    A   
Sbjct: 62  AAERGWGRVVEHRVVDLSSLGELWRGTQLTDPSVSVEQSYTPTVVVPIRNVVMAAVATAY 121

Query: 123 AYRL----GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
           AY +    G    VI     D     +   + +    +   +               +  
Sbjct: 122 AYTVGRNAGAKTYVILGSHYDDIKPREDTWEPLYPDCSPECVEAMQTAFRICHFRGERGV 181

Query: 179 ETWKLAQD---------IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
           E W  +++         +  Q++ +LI  ++ +CY             C SC +C  R  
Sbjct: 182 EIWTPSREGLRKSQLLKMCHQEVGDLIY-DTWSCYKSGEA-------HCGSCESCKNRHA 233

Query: 230 GWMEFK 235
            ++E  
Sbjct: 234 AFIEAG 239


>gi|126458827|ref|YP_001055105.1| ExsB family protein [Pyrobaculum calidifontis JCM 11548]
 gi|126248548|gb|ABO07639.1| ExsB family protein [Pyrobaculum calidifontis JCM 11548]
          Length = 270

 Score =  128 bits (320), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 52/242 (21%), Positives = 92/242 (38%), Gaps = 22/242 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+ + SGG DS+   +  + R   V  LSF YGQ+  VE+E    V K++ EL  K 
Sbjct: 3   KCKAVAVVSGGPDSTCYTALWMKRGCDVHALSFLYGQKGAVEVEKAQAVLKRLDELAAKR 62

Query: 68  K-DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               + E  ++ L+ LG++   +   +  + ++    P   VP RN++    A   AY L
Sbjct: 63  GWGRVVEHKVVDLSSLGELWRGTQLTDAGVAVEREYAPTVVVPIRNVVMAAVATAYAYTL 122

Query: 127 ----GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
               G    VI     D     +   + +    +                   +  E W 
Sbjct: 123 RAVSGAKVYVILGSHYDDIRPREDTWEPLYPDCSPECFEALQAAFRICHFRGERDVELWT 182

Query: 183 LAQD---------IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
            +++         +   ++ NL+ E + +CYL            C  C +C  R + ++E
Sbjct: 183 PSREGLRKSQLLKLCYDEVGNLVYE-TWSCYLSDEA-------HCGRCESCRNRHRAFLE 234

Query: 234 FK 235
             
Sbjct: 235 AG 236


>gi|20094501|ref|NP_614348.1| PP-loop superfamily ATPase [Methanopyrus kandleri AV19]
 gi|74559880|sp|Q8TWG9|QUEC_METKA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|19887606|gb|AAM02278.1| Predicted PP-loop superfamily ATPase [Methanopyrus kandleri AV19]
          Length = 229

 Score =  127 bits (319), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/231 (20%), Positives = 85/231 (36%), Gaps = 14/231 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKW 67
           + ++L SGG DSS    WA++    RV  L  DYGQR    E      + + +       
Sbjct: 3   TTVVLCSGGLDSSVIAKWAVEELGGRVICLFVDYGQRNAPFERRAAERIAEAVGAEFETV 62

Query: 68  KDSLGEDHILPLAIL-GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                        +  G +   + T++++           +        L     L    
Sbjct: 63  GTFWLRRLCPDNPMFAGRLPREAGTEDLSANW---LPARNWNLLGVAAALCDHLYLEGED 119

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
              +IV G+   +   +PD   +   A+  A+  G+ S   +H+PL  L K    +L  +
Sbjct: 120 DEFHIVWGINAEEAERFPDNTKEFADAVAEALKRGLPSRPRLHSPLAELYKPGIVRLGSE 179

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +G        +E S +CY    +   +    C  C ACY R++ +     +
Sbjct: 180 LGA------PMELSVSCYNPIWE--DDTPVHCGECEACYHRKRAFERAGIE 222


>gi|189346042|ref|YP_001942571.1| exsB protein [Chlorobium limicola DSM 245]
 gi|254764319|sp|B3EGF5|QUEC_CHLL2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|189340189|gb|ACD89592.1| exsB protein [Chlorobium limicola DSM 245]
          Length = 226

 Score =  127 bits (319), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 23/227 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWK 68
            A+LL SGG DS    + A +    +  +  +YGQR  + ELEC   +     ++  + +
Sbjct: 2   KAVLLISGGMDSLVTTAIAAEEKLELAAMHVNYGQRTWQKELECFRRICNHY-QIRHRLE 60

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKI-QDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              G      LA  G  S +     V+    Q  ++P ++VP RN  FL  A + +  +G
Sbjct: 61  IEAGY-----LAQTGGSSLTDPAMPVSGADLQGTDIPTSYVPFRNAGFLSMAVSWSEVIG 115

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKLAQ 185
              I IG  E D SGYPDCR     A    I LG      + + TPL+ ++K +      
Sbjct: 116 AGKIFIGAVEEDSSGYPDCRQVFYDAFNRVIELGTRPDTAIEIVTPLISMQKCDIVLKGM 175

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
           ++      N     S +CY  +       G  C  C +C  R + + 
Sbjct: 176 EL------NAPFACSWSCYKSE-------GRACGVCDSCARRLRAFE 209


>gi|327189841|gb|EGE56979.1| succinoglycan biosynthesis transcriptional regulator protein
           [Rhizobium etli CNPAF512]
          Length = 236

 Score =  127 bits (319), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 82/237 (34%), Gaps = 25/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +++ SGG DS +           +  +SFDYGQR++ EL+       ++         
Sbjct: 2   KTIVVCSGGLDSVSLAHKMAAEQQLIGLVSFDYGQRHRKELDFAARCAARLAVPHHIIDI 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +    H      L   + +   +       +  +  T VP RN I L  A  LA      
Sbjct: 62  AAIGGH------LSGSALTDNVEVPDGHYAEETMKATVVPNRNAIMLAIAFGLAAAQKAD 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            + + V   D+  YPDCR   I A +      L   + V +  P + + K       +  
Sbjct: 116 AVAVAVHGGDHFIYPDCRPGFIDAFQCMQNEALDGYASVRLLAPYVDVSKAAIVADGEKH 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQD 240
                      E+ +CY G R         C  C  C  R++ +          Y+D
Sbjct: 176 AT------PFAETWSCYKGGR-------LHCGRCGTCVERREAFHLAGISDPTDYED 219


>gi|301167719|emb|CBW27303.1| putative transcriptional regulatory protein [Bacteriovorax marinus
           SJ]
          Length = 233

 Score =  127 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 26/240 (10%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M++  K    A++L SGG DS    + A ++  R+  L  +YGQ+       +    K  
Sbjct: 1   MSE--KSNELAVVLVSGGMDSLVTAAMANEKHQRMAFLHLNYGQK------TQDRELKCF 52

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNV----AMKIQDNNLPNTFVPGRNIIFL 116
            E+   +        I+ ++ L  I  SSLT +       K     +P+++VP RN   +
Sbjct: 53  NEIADHYNVPKSLRKIIDISFLSQIGGSSLTDDSIDVKDYKGDSEEIPDSYVPFRNTHIV 112

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-HVTVHTPLMWL 175
             A + +  +G   I IG    D SGYPDCR    +A+   I  G +   + V TP++ +
Sbjct: 113 AMAVSWSEVVGAKKIYIGAVYEDSSGYPDCRPSYYQALNNLIKEGTKDGDIEVVTPVIHM 172

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           KK E  K A  +         L  S++CY             C  C +C LR +G+    
Sbjct: 173 KKEEIVKKAISLQA------PLSSSYSCYARGDK-------ACGICDSCALRLRGFQIAG 219


>gi|20804216|emb|CAD31242.1| HYPOTHETICAL CONSERVED PROTEIN [Mesorhizobium loti R7A]
          Length = 232

 Score =  127 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 49/228 (21%), Positives = 78/228 (34%), Gaps = 21/228 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL++ SGG DS +           +  LSFDYGQR+K EL       K++          
Sbjct: 3   ALVICSGGLDSVSLAHKVATEQKLIGLLSFDYGQRHKKELGFAAICAKRLGVPHQIVDIR 62

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                      L   + +           ++++  T VP RN I L  A  +A       
Sbjct: 63  DVG------RNLSGSALTDNVDVPDGHYAEDSMRITVVPNRNAIMLAIAFGVAAAQKADA 116

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
           +   V   D+  YPDCR   I A +      L   + + ++ P + + K +         
Sbjct: 117 VATAVHGGDHFIYPDCRPAFIDAFQTMQNHALAGYADIRLYAPYVNMSKADIVSEGAKYA 176

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
                    E + +CY G           C  C  C  R++ +     
Sbjct: 177 T------PFEATWSCYKGG-------ARHCGRCGTCVERREAFDLAGI 211


>gi|17986379|ref|NP_539013.1| succinoglycan biosynthesis regulator [Brucella melitensis bv. 1
           str. 16M]
 gi|62290820|ref|YP_222613.1| exsB protein [Brucella abortus bv. 1 str. 9-941]
 gi|82700732|ref|YP_415306.1| ExsB protein [Brucella melitensis biovar Abortus 2308]
 gi|148559755|ref|YP_001259789.1| exsB protein [Brucella ovis ATCC 25840]
 gi|163843994|ref|YP_001628398.1| exsB protein [Brucella suis ATCC 23445]
 gi|189025039|ref|YP_001935807.1| ExsB protein [Brucella abortus S19]
 gi|225628171|ref|ZP_03786206.1| exsB protein [Brucella ceti str. Cudo]
 gi|225853408|ref|YP_002733641.1| ExsB protein [Brucella melitensis ATCC 23457]
 gi|237816334|ref|ZP_04595327.1| exsB protein [Brucella abortus str. 2308 A]
 gi|254690110|ref|ZP_05153364.1| exsB protein [Brucella abortus bv. 6 str. 870]
 gi|254694600|ref|ZP_05156428.1| exsB protein [Brucella abortus bv. 3 str. Tulya]
 gi|254696225|ref|ZP_05158053.1| exsB protein [Brucella abortus bv. 2 str. 86/8/59]
 gi|254700610|ref|ZP_05162438.1| exsB protein [Brucella suis bv. 5 str. 513]
 gi|254707505|ref|ZP_05169333.1| exsB protein [Brucella pinnipedialis M163/99/10]
 gi|254708955|ref|ZP_05170766.1| exsB protein [Brucella pinnipedialis B2/94]
 gi|254731143|ref|ZP_05189721.1| exsB protein [Brucella abortus bv. 4 str. 292]
 gi|256030482|ref|ZP_05444096.1| exsB protein [Brucella pinnipedialis M292/94/1]
 gi|256112300|ref|ZP_05453221.1| exsB protein [Brucella melitensis bv. 3 str. Ether]
 gi|256158468|ref|ZP_05456366.1| exsB protein [Brucella ceti M490/95/1]
 gi|256253887|ref|ZP_05459423.1| exsB protein [Brucella ceti B1/94]
 gi|256258364|ref|ZP_05463900.1| exsB protein [Brucella abortus bv. 9 str. C68]
 gi|256263112|ref|ZP_05465644.1| queuosine biosynthesis protein queC [Brucella melitensis bv. 2 str.
           63/9]
 gi|256370374|ref|YP_003107885.1| queuosine biosynthesis protein QueC [Brucella microti CCM 4915]
 gi|260169389|ref|ZP_05756200.1| queuosine biosynthesis protein QueC [Brucella sp. F5/99]
 gi|260546087|ref|ZP_05821827.1| queuosine biosynthesis protein queC [Brucella abortus NCTC 8038]
 gi|260562884|ref|ZP_05833370.1| queuosine biosynthesis protein queC [Brucella melitensis bv. 1 str.
           16M]
 gi|260755649|ref|ZP_05867997.1| queuosine biosynthesis protein queC [Brucella abortus bv. 6 str.
           870]
 gi|260758874|ref|ZP_05871222.1| queuosine biosynthesis protein queC [Brucella abortus bv. 4 str.
           292]
 gi|260760598|ref|ZP_05872941.1| queuosine biosynthesis protein queC [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260884674|ref|ZP_05896288.1| queuosine biosynthesis protein queC [Brucella abortus bv. 9 str.
           C68]
 gi|261214924|ref|ZP_05929205.1| queuosine biosynthesis protein queC [Brucella abortus bv. 3 str.
           Tulya]
 gi|261221024|ref|ZP_05935305.1| queuosine biosynthesis protein queC [Brucella ceti B1/94]
 gi|261314988|ref|ZP_05954185.1| queuosine biosynthesis protein queC [Brucella pinnipedialis
           M163/99/10]
 gi|261316454|ref|ZP_05955651.1| queuosine biosynthesis protein queC [Brucella pinnipedialis B2/94]
 gi|261751119|ref|ZP_05994828.1| queuosine biosynthesis protein queC [Brucella suis bv. 5 str. 513]
 gi|261758911|ref|ZP_06002620.1| queuosine biosynthesis protein queC [Brucella sp. F5/99]
 gi|265987524|ref|ZP_06100081.1| queuosine biosynthesis protein queC [Brucella pinnipedialis
           M292/94/1]
 gi|265993733|ref|ZP_06106290.1| queuosine biosynthesis protein queC [Brucella melitensis bv. 3 str.
           Ether]
 gi|265996984|ref|ZP_06109541.1| queuosine biosynthesis protein queC [Brucella ceti M490/95/1]
 gi|297247206|ref|ZP_06930924.1| exsB protein [Brucella abortus bv. 5 str. B3196]
 gi|75496157|sp|Q57AT2|QUEC_BRUAB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|81852586|sp|Q8YJI8|QUEC_BRUME RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|110816216|sp|Q2YR96|QUEC_BRUA2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|167016411|sp|A5VSU2|QUEC_BRUO2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|189038899|sp|B0CIX5|QUEC_BRUSI RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764309|sp|B2S8M9|QUEC_BRUA1 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|254764310|sp|C0RFL5|QUEC_BRUMB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|17981969|gb|AAL51277.1| succinoglycan biosynthesis regulator [Brucella melitensis bv. 1
           str. 16M]
 gi|62196952|gb|AAX75252.1| exsB protein [Brucella abortus bv. 1 str. 9-941]
 gi|82616833|emb|CAJ11929.1| ExsB protein [Brucella melitensis biovar Abortus 2308]
 gi|148371012|gb|ABQ60991.1| exsB protein [Brucella ovis ATCC 25840]
 gi|163674717|gb|ABY38828.1| exsB protein [Brucella suis ATCC 23445]
 gi|189020611|gb|ACD73333.1| ExsB protein [Brucella abortus S19]
 gi|225616996|gb|EEH14043.1| exsB protein [Brucella ceti str. Cudo]
 gi|225641773|gb|ACO01687.1| exsB protein [Brucella melitensis ATCC 23457]
 gi|237788401|gb|EEP62616.1| exsB protein [Brucella abortus str. 2308 A]
 gi|256000537|gb|ACU48936.1| queuosine biosynthesis protein QueC [Brucella microti CCM 4915]
 gi|260096194|gb|EEW80070.1| queuosine biosynthesis protein queC [Brucella abortus NCTC 8038]
 gi|260152900|gb|EEW87992.1| queuosine biosynthesis protein queC [Brucella melitensis bv. 1 str.
           16M]
 gi|260669192|gb|EEX56132.1| queuosine biosynthesis protein queC [Brucella abortus bv. 4 str.
           292]
 gi|260671030|gb|EEX57851.1| queuosine biosynthesis protein queC [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260675757|gb|EEX62578.1| queuosine biosynthesis protein queC [Brucella abortus bv. 6 str.
           870]
 gi|260874202|gb|EEX81271.1| queuosine biosynthesis protein queC [Brucella abortus bv. 9 str.
           C68]
 gi|260916531|gb|EEX83392.1| queuosine biosynthesis protein queC [Brucella abortus bv. 3 str.
           Tulya]
 gi|260919608|gb|EEX86261.1| queuosine biosynthesis protein queC [Brucella ceti B1/94]
 gi|261295677|gb|EEX99173.1| queuosine biosynthesis protein queC [Brucella pinnipedialis B2/94]
 gi|261304014|gb|EEY07511.1| queuosine biosynthesis protein queC [Brucella pinnipedialis
           M163/99/10]
 gi|261738895|gb|EEY26891.1| queuosine biosynthesis protein queC [Brucella sp. F5/99]
 gi|261740872|gb|EEY28798.1| queuosine biosynthesis protein queC [Brucella suis bv. 5 str. 513]
 gi|262551452|gb|EEZ07442.1| queuosine biosynthesis protein queC [Brucella ceti M490/95/1]
 gi|262764714|gb|EEZ10635.1| queuosine biosynthesis protein queC [Brucella melitensis bv. 3 str.
           Ether]
 gi|263093013|gb|EEZ17163.1| queuosine biosynthesis protein queC [Brucella melitensis bv. 2 str.
           63/9]
 gi|264659721|gb|EEZ29982.1| queuosine biosynthesis protein queC [Brucella pinnipedialis
           M292/94/1]
 gi|297174375|gb|EFH33722.1| exsB protein [Brucella abortus bv. 5 str. B3196]
 gi|326409971|gb|ADZ67036.1| ExsB protein [Brucella melitensis M28]
 gi|326539688|gb|ADZ87903.1| exsB protein [Brucella melitensis M5-90]
          Length = 232

 Score =  127 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 52/237 (21%), Positives = 81/237 (34%), Gaps = 25/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L++ SGG DS +         +    LSFDYGQR+K EL+      K++         
Sbjct: 2   KTLVICSGGLDSVSLAHKMAAEHELTGLLSFDYGQRHKKELDFAQACAKRLGVPHQIIDI 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     A L   + +           +  +  T VP RN I L  A  +A      
Sbjct: 62  RTIG------ASLTGSALTDDVDVPDGHYAEETMKVTVVPNRNAIMLAIAFGVAAAQKAD 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            + + V   D+  YPDCR   I A +      L   + V +  P +   K +        
Sbjct: 116 AVALAVHGGDHFIYPDCRPGFIEAFQTMQKHALDGYADVKLLAPYVHATKADIVADGAKY 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW----MEFKEKYQD 240
                     E + +CY G           C  C  C  R++ +    ++    Y+D
Sbjct: 176 ------RTPFEATWSCYKGAD-------RHCGRCGTCVERREAFHLAGIDDPTSYED 219


>gi|294496221|ref|YP_003542714.1| exsB protein [Methanohalophilus mahii DSM 5219]
 gi|292667220|gb|ADE37069.1| exsB protein [Methanohalophilus mahii DSM 5219]
          Length = 228

 Score =  127 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/231 (21%), Positives = 86/231 (37%), Gaps = 16/231 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKWK 68
            A+ L S G DS   L+ A  ++D    L+FDYGQ     E++    +            
Sbjct: 4   KAVCLLSSGLDSLASLAIASAKYDVQIGLTFDYGQLAADAEIDHSRQICAHYGIPHRVIS 63

Query: 69  DSLGEDHIL--PLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +D      +   G +   +       ++   +  N +VP RN +    AA+ A  L
Sbjct: 64  LDWMKDITTTSLVNRQGCLPDMAGADLGKREVTSESAANVWVPNRNGLMANIAASFAEAL 123

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   IV G    + + +PD   + +  I  A +    + V + +P++ + K    K A  
Sbjct: 124 GCGYIVAGFNAEEAATFPDNSPEFVDCINRAFSYSTLNGVRLISPVLEMDKVAIVKEAVR 183

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                     L  S +CY GK          C  C +C  R + + +   +
Sbjct: 184 AQA------PLGLSWSCYQGKEKP-------CGLCESCVRRARAFQKAGVQ 221


>gi|254718022|ref|ZP_05179833.1| exsB protein [Brucella sp. 83/13]
 gi|265982970|ref|ZP_06095705.1| queuosine biosynthesis protein queC [Brucella sp. 83/13]
 gi|306839803|ref|ZP_07472604.1| exsB protein [Brucella sp. NF 2653]
 gi|264661562|gb|EEZ31823.1| queuosine biosynthesis protein queC [Brucella sp. 83/13]
 gi|306405158|gb|EFM61436.1| exsB protein [Brucella sp. NF 2653]
          Length = 232

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 81/237 (34%), Gaps = 25/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L++ SGG DS +         +    LSFDYGQR++ EL+      K++         
Sbjct: 2   KTLVICSGGLDSVSLAHKMAAEHELTGLLSFDYGQRHRKELDFAQACAKRLGVPHQIIDI 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     A L   + +           +  +  T VP RN I L  A  +A      
Sbjct: 62  RTIG------ASLTGSALTDDVDVPDGHYAEETMKVTVVPNRNAIMLAIAFGVAAAQKAD 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            + + V   D+  YPDCR   I A +      L   + V +  P +   K +        
Sbjct: 116 AVALAVHGGDHFIYPDCRPGFIDAFQTMQKHALDGYADVKLLAPYVHATKADIVADGAKY 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW----MEFKEKYQD 240
                     E + +CY G           C  C  C  R++ +    ++    Y+D
Sbjct: 176 HT------PFEATWSCYKGAE-------RHCGRCGTCVERREAFHLAGIDDPTSYED 219


>gi|254496018|ref|ZP_05108921.1| ExsB protein [Legionella drancourtii LLAP12]
 gi|254354767|gb|EET13399.1| ExsB protein [Legionella drancourtii LLAP12]
          Length = 206

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/216 (26%), Positives = 88/216 (40%), Gaps = 23/216 (10%)

Query: 25  LSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGD 84
           ++ A  +      +SF YGQR+  EL     + +       K          L   +  +
Sbjct: 1   MALAKAKGFACYAMSFSYGQRHTAELSAATRIAQHYAVKEHKIV-------TLDTQLFRN 53

Query: 85  ISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYP 144
            + +  +  V    +   +P T+VP RN IFL  A   A  +G  +I IG    DYS YP
Sbjct: 54  SALTDASMAVPDFQESAEIPITYVPARNTIFLSMALGFAESIGARDIYIGASSVDYSHYP 113

Query: 145 DCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEE 199
           DCR + I A +T  NL  +        T+H PL  L K +T +L   +G      +    
Sbjct: 114 DCRPEFIAAFQTLANLATKAGVSGDPFTIHAPLQHLSKVKTIELGLSLG------VDYSL 167

Query: 200 SHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           + +CY          G  C  C +C  R++G+    
Sbjct: 168 TVSCYQANDA-----GEACGQCDSCTFRKRGFANAG 198


>gi|323701739|ref|ZP_08113410.1| exsB protein [Desulfotomaculum nigrificans DSM 574]
 gi|323533275|gb|EGB23143.1| exsB protein [Desulfotomaculum nigrificans DSM 574]
          Length = 228

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 50/234 (21%), Positives = 87/234 (37%), Gaps = 34/234 (14%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +++L SGG DS+ CL++ L        L+F+YGQR+           ++I         
Sbjct: 2   KSIVLLSGGLDSAVCLAYGLTETKVELALTFNYGQRSAT---------REIQAAAALANY 52

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT------------FVPGRNIIFLV 117
              +  ++ L  L +I+ +SL        +                   +VP RN +F+ 
Sbjct: 53  YGVKHRVIDLPWLAEITTTSLVNEEENIPEPMGPELDYIPTAKATAAAVWVPNRNGLFVN 112

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
            AA  A  L    +V G    + + +PD   + + A  TA+     + V V +    L K
Sbjct: 113 IAACFAETLNCQLVVAGFNREEAATFPDNTPEFVTAASTAMAYSTANQVKVVSFTNRLNK 172

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
            E   L   +G      +  +   +CY G           C  C +C    + +
Sbjct: 173 KEIVALGHRLG------VPWDLIWSCYHGGDKM-------CGRCESCQRMMRAF 213


>gi|23502820|ref|NP_698947.1| exsB protein [Brucella suis 1330]
 gi|161619890|ref|YP_001593777.1| exsB protein [Brucella canis ATCC 23365]
 gi|254704980|ref|ZP_05166808.1| exsB protein [Brucella suis bv. 3 str. 686]
 gi|260567546|ref|ZP_05838016.1| queuosine biosynthesis protein queC [Brucella suis bv. 4 str. 40]
 gi|261755681|ref|ZP_05999390.1| queuosine biosynthesis protein queC [Brucella suis bv. 3 str. 686]
 gi|81751945|sp|Q8FYB3|QUEC_BRUSU RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|189038898|sp|A9M959|QUEC_BRUC2 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|23348844|gb|AAN30862.1| exsB protein [Brucella suis 1330]
 gi|161336701|gb|ABX63006.1| exsB protein [Brucella canis ATCC 23365]
 gi|260157064|gb|EEW92144.1| queuosine biosynthesis protein queC [Brucella suis bv. 4 str. 40]
 gi|261745434|gb|EEY33360.1| queuosine biosynthesis protein queC [Brucella suis bv. 3 str. 686]
          Length = 232

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 53/237 (22%), Positives = 82/237 (34%), Gaps = 25/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L++ SGG DS +         +    LSFDYGQR+K EL+      K++         
Sbjct: 2   KTLVICSGGLDSVSLAHKMAAEHELTGLLSFDYGQRHKKELDFAQACAKRLGVPHQIIDI 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     A L   + +           +  +  T VP RN I LV A  +A      
Sbjct: 62  RTIG------ASLTGSALTDDVDVPDGHYAEETMKVTVVPNRNAIMLVIAFGVAAAQKAD 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            + + V   D+  YPDCR   I A +      L   + V +  P +   K +        
Sbjct: 116 AVALAVHGGDHFIYPDCRPGFIEAFQTMQKHALDGYADVKLLAPYVHATKADIVADGAKY 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW----MEFKEKYQD 240
                     E + +CY G           C  C  C  R++ +    ++    Y+D
Sbjct: 176 ------RTPFEATWSCYKGAD-------RHCGRCGTCVERREAFHLAGIDDPTSYED 219


>gi|85707172|ref|ZP_01038259.1| hypothetical protein ROS217_16351 [Roseovarius sp. 217]
 gi|85668331|gb|EAQ23205.1| hypothetical protein ROS217_16351 [Roseovarius sp. 217]
          Length = 232

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 80/237 (33%), Gaps = 25/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +++ SGG DS +         +    LSFDYGQR+  E+E      +++         
Sbjct: 2   RTIVICSGGLDSVSLAHKVAAEHELAGLLSFDYGQRHVKEVEYAAACARRLGVPHKVVDI 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     A L   + +           +  +  T VP RN I L  A  +A      
Sbjct: 62  RQIG------AALSGSALTDDVAVPDGHYAEETMKITIVPNRNAIMLAIAFGMAAAEKAD 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            +   V   D+  YPDCR   I A +      L   + V ++TP +   K +        
Sbjct: 116 AVATAVHGGDHFIYPDCRPGFINAFQAMQDAALEGYAEVKLYTPYLQGSKGDIVTDGAKH 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQD 240
           G          E+ +CY G           C  C  C  R++ +          Y+D
Sbjct: 176 GT------PFAETWSCYKGG-------ARHCGRCGTCVERREAFHLAGVVDPTDYED 219


>gi|306843409|ref|ZP_07476010.1| exsB protein [Brucella sp. BO1]
 gi|306276100|gb|EFM57800.1| exsB protein [Brucella sp. BO1]
          Length = 232

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 81/237 (34%), Gaps = 25/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L++ SGG DS +         +    LSFDYGQR++ EL+      K++         
Sbjct: 2   KTLVICSGGLDSVSLAHKMAAEHELTGLLSFDYGQRHRKELDFAQACAKRLGVPHQIIDI 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     A L   + +           +  +  T VP RN I L  A  +A      
Sbjct: 62  RTIG------ASLTGSALTDDVDVPDGHYAEETMKVTVVPNRNAIMLAIAFGVAAAQKAD 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            + + V   D+  YPDCR   I A +      L   + V +  P +   K +        
Sbjct: 116 AVALAVHGGDHFIYPDCRPGFIEAFQTMQKHALDGYADVKLLAPYVHATKADIVADGAKY 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW----MEFKEKYQD 240
                     E + +CY G           C  C  C  R++ +    ++    Y+D
Sbjct: 176 HT------PFEATWSCYKGAD-------RHCGRCGTCVERREAFHLAGIDDPTSYED 219


>gi|290967794|ref|ZP_06559347.1| protein ExsB [Megasphaera genomosp. type_1 str. 28L]
 gi|290782153|gb|EFD94728.1| protein ExsB [Megasphaera genomosp. type_1 str. 28L]
          Length = 226

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 86/232 (37%), Gaps = 19/232 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+TCL+  + ++    +  ++  YGQ++  EL+    V         + 
Sbjct: 2   KCLVLLSGGIDSTTCLALGVKKYGASELLAVTAYYGQKHAKELQAARNVAAYYGVAHREI 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN--TFVPGRNIIFLVFAATLAYR 125
             S          + G     + T                T+VP RN +FL FAA LA  
Sbjct: 62  DVSQAFTLSDCPLLAGRKGAIAHTSYSDQLAAKGGAGTLDTYVPFRNGLFLSFAAALAVS 121

Query: 126 LGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           +  + I  G    D +G  YPDC  +  +A+ TAI  G      +  PL+   K +  + 
Sbjct: 122 VHASCIYYGAHADDAAGRAYPDCTPEFEQAMATAIYEGSGKTCRLEAPLLQWNKAQVVRQ 181

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
              +            + +CY G+          C  C  C  R   +    
Sbjct: 182 GLQLHA------PYHLTWSCYEGREKP-------CGLCGTCRDRAAAFAANG 220


>gi|323345225|ref|ZP_08085448.1| transcription regulator ExsB [Prevotella oralis ATCC 33269]
 gi|323093339|gb|EFZ35917.1| transcription regulator ExsB [Prevotella oralis ATCC 33269]
          Length = 218

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 56/234 (23%), Positives = 90/234 (38%), Gaps = 30/234 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKW 67
             ++++ SGG DS T L    DR      +SFDYG  +   E+       K++       
Sbjct: 2   KDSVIIVSGGMDSVTMLYEYQDR--IALGISFDYGSNHNAKEIPYARLHCKRLG------ 53

Query: 68  KDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                   ++ L  +     SSL +           + N+ +T VP RN I L  A  +A
Sbjct: 54  ----IRHIVIDLGFVHQYFKSSLLEGADAIPEGSYNEGNMKSTVVPFRNGIMLSIAVGVA 109

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
               +  +++     D++ YPDCR D + A+ TA   G    V V  P   + K +  + 
Sbjct: 110 ESHHLKYVMMANHGGDHAIYPDCRPDFVAAMSTAATAGTYEKVCVLAPYTGITKTDIARR 169

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            Q  G      +   E+ +CY G           C  C  C  R++   E   +
Sbjct: 170 GQKFG------VNFAETWSCYKGGDK-------HCGHCGTCRERKEALAEAGIE 210


>gi|294851210|ref|ZP_06791883.1| exsB protein [Brucella sp. NVSL 07-0026]
 gi|294819799|gb|EFG36798.1| exsB protein [Brucella sp. NVSL 07-0026]
          Length = 232

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 80/237 (33%), Gaps = 25/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L++ SGG DS +         +    LSFDYGQR+K EL+      K++         
Sbjct: 2   KTLVICSGGLDSVSLAHKMAAEHELTGLLSFDYGQRHKKELDFAQACAKRLGVPHQIIDI 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     A L   + +           +  +  T V  RN I L  A  +A      
Sbjct: 62  RTIG------ASLTGSALTDDVDVPDGHYAEETMKVTVVSNRNAIMLAIAFGVAAAQKAD 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            + + V   D+  YPDCR   I A +      L   + V +  P +   K +        
Sbjct: 116 AVALAVHGGDHFIYPDCRPGFIEAFQTMQKHALDGYADVKLLAPYVHATKADIVADGAKY 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW----MEFKEKYQD 240
                     E + +CY G           C  C  C  R++ +    ++    Y+D
Sbjct: 176 ------RTPFEATWSCYKGAD-------RHCGRCGTCVERREAFHLAGIDDPTSYED 219


>gi|260437275|ref|ZP_05791091.1| ExsB protein [Butyrivibrio crossotus DSM 2876]
 gi|292810585|gb|EFF69790.1| ExsB protein [Butyrivibrio crossotus DSM 2876]
          Length = 227

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 64/229 (27%), Positives = 94/229 (41%), Gaps = 18/229 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            AL+L SGG DS+TCL  A+D++  + V +LS  YGQ++  ELE    V K         
Sbjct: 2   RALVLSSGGVDSTTCLGMAVDKYGKENVVSLSVFYGQKHTKELEAATKVAKYYGVEHMAI 61

Query: 68  KDSLG-EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             SL  +D    L           +    ++  D    +T+VP RN +FL  AA++A   
Sbjct: 62  DLSLIFKDSDCSLLSHSTEKIPHESYAEQLEKTDGKPVSTYVPFRNGLFLATAASIALSK 121

Query: 127 GITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
               I  G    D +G  YPDC      A+ TA+  G    + +  PL+   K    K  
Sbjct: 122 KCDVIYYGAHADDAAGNAYPDCSEVFYNAMNTAVYEGSGRQLKIEAPLVTWNKATVVKKG 181

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
            ++       +  E + +CY G           C  C  C  R K +  
Sbjct: 182 LEL------KVPYELTWSCYEGGDKP-------CMKCGTCIDRMKAFEA 217


>gi|124027914|ref|YP_001013234.1| PP-loop superfamily ATPase [Hyperthermus butylicus DSM 5456]
 gi|123978608|gb|ABM80889.1| predicted PP-loop superfamily ATPase [Hyperthermus butylicus DSM
           5456]
          Length = 287

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 60/253 (23%), Positives = 99/253 (39%), Gaps = 32/253 (12%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +++K    + + SGG DS+  +   L R   V  LSF+YGQ+   ELE    +  +I E+
Sbjct: 9   VVRKPCRVVAVVSGGPDSTGYMVQWLARGCMVHALSFNYGQKGSKELEVAEKLLARINEM 68

Query: 64  M--PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                    + E  ++ ++ + ++   +   +  +K+++   P   VP RN++ L  A  
Sbjct: 69  ASSRPGWGRILEHRVVDMSFMRELWRGTQLTDETVKVEEEYQPTVVVPIRNVVMLSIATA 128

Query: 122 LAYRL-------------GITNIVIGVCETDYSG-YPDCRHDTIRAIETAINLGMESHVT 167
            AY L             G     I      +   YPDC  + I A++TA  L       
Sbjct: 129 YAYSLAERYSGENIYVAYGAHYNDIAPRSDTWEPLYPDCSPECIEALQTAFRLCHFRGSR 188

Query: 168 VHTPLM----WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPA 223
                      L K E  K    + G    NLI E + +CY   R       + C  C +
Sbjct: 189 RIEVWSPSREGLTKAENLKRTYQLIG----NLIYE-TWSCYESGR-------FHCGRCKS 236

Query: 224 CYLRQKGWMEFKE 236
           C  R + + E   
Sbjct: 237 CRNRHRAFKEAGI 249


>gi|159041826|ref|YP_001541078.1| exsB protein [Caldivirga maquilingensis IC-167]
 gi|157920661|gb|ABW02088.1| exsB protein [Caldivirga maquilingensis IC-167]
          Length = 502

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/239 (21%), Positives = 93/239 (38%), Gaps = 29/239 (12%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
            K    L++ SGG DS+T  +  + +   V  L F+YG   +   E      ++I E + 
Sbjct: 250 SKPRRVLVVASGGLDSTTSATQLIKQGYDVTLLHFNYGHVAEGPEENA---VRRIAEFLN 306

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN-----LPNTFVPGRNIIFLVFAA 120
                      + +     + HS L  +  +  +          + +VP RN++F+  A 
Sbjct: 307 ------VPLLEVNMDFFKIVKHSPLLGDGEINRRREGITGAEFAHEWVPARNLVFIALAV 360

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL--GMESHVTVHTPLMWLKKY 178
            +A  +G   +  GV   +   YPD   + IR +   +    G   HV +  P+  L K+
Sbjct: 361 AIAEAMGYDYVATGVNLEEAGAYPDNEMEFIRLLNQVMPYAVGPNKHVELLMPVGHLVKH 420

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           E  KL  +IG        L  + +CY        +    C  C  C++R+  +     +
Sbjct: 421 EIVKLGLEIGA------PLHLTWSCYD-------KGPKHCGRCGPCFMRRLAFKINGVR 466


>gi|229823793|ref|ZP_04449862.1| hypothetical protein GCWU000282_01095 [Catonella morbi ATCC 51271]
 gi|229786832|gb|EEP22946.1| hypothetical protein GCWU000282_01095 [Catonella morbi ATCC 51271]
          Length = 217

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 91/229 (39%), Gaps = 28/229 (12%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +L SGG DSST L+ AL R  +V  +S  Y Q++                     +    
Sbjct: 4   VLLSGGADSSTALALALSRDPQVVAVSIAYNQQHAQAEL---------AAAKAVAQHYGV 54

Query: 73  EDHILPLAILGDISHSS-----LTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +  IL LA +   S S+               D   PNT V  RN +F+    +LA +LG
Sbjct: 55  DHRILDLAAIFADSRSALNAANDLVASQGDYADQEAPNTEVEFRNGVFIAILTSLAMQLG 114

Query: 128 ITNIVIGVC-ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
              +  G   +     YPDC  D + A++ A+ LG    V + TP   + K +  KL  +
Sbjct: 115 ADALYFGAHLDDSGVIYPDCSPDFVAAMDQAVRLGTGGKVRLETPFGQMTKADIVKLGLE 174

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           +G      +    +++CY G +         C  C  C  R+K +    
Sbjct: 175 LG------VPYHLTYSCYAGSQPP-------CGQCGTCIDRRKAFEANG 210


>gi|306842892|ref|ZP_07475528.1| exsB protein [Brucella sp. BO2]
 gi|306286915|gb|EFM58435.1| exsB protein [Brucella sp. BO2]
          Length = 232

 Score =  126 bits (315), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 81/237 (34%), Gaps = 25/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L++ SGG DS +         +    LSFDYGQR++ EL+      K++         
Sbjct: 2   KTLVICSGGLDSVSLAHKMAAEHELTGLLSFDYGQRHRKELDFAQACAKRLGVPHQIIDI 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     A L   + +           +  +  T VP RN I L  A  +A      
Sbjct: 62  RTIG------ASLTGSALTDDVDVPDGHYAEETMKVTVVPNRNAIMLAIAFGVAAAQKAD 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            + + V   D+  YPDCR   I A +      L   + V +  P +   K +        
Sbjct: 116 AVALAVHGGDHFIYPDCRPGFIEAFQTMQKHALDGYADVKLLAPYVHATKADILADGAKY 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW----MEFKEKYQD 240
                     E + +CY G           C  C  C  R++ +    ++    Y+D
Sbjct: 176 HT------PFEATWSCYKGAE-------RHCGRCGTCVERREAFHLAGIDDPTSYED 219


>gi|307943820|ref|ZP_07659164.1| queuosine biosynthesis protein QueC [Roseibium sp. TrichSKD4]
 gi|307773450|gb|EFO32667.1| queuosine biosynthesis protein QueC [Roseibium sp. TrichSKD4]
          Length = 229

 Score =  126 bits (315), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/241 (22%), Positives = 91/241 (37%), Gaps = 33/241 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L++ SGG DS T           +  LSFDYGQR++ EL+C       +         
Sbjct: 2   KTLVVCSGGMDSVTLAHKVQRENQLIALLSFDYGQRHRKELDCAKQCADDLG-------- 53

Query: 70  SLGEDHILPLAI----LGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              E  ++ ++     L   + +           ++ +  T VP RN I L  A  +A  
Sbjct: 54  --VEHILIDISGIGAKLSGSALTDDIDVPDGHYAEDTMKITVVPNRNAIMLTIAFGIAAA 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWKL 183
            G   +   V   D+  YPDCR   + A E      L   + + ++TP + L K +    
Sbjct: 112 RGANAVAAAVHGGDHFIYPDCRPGFVEAFETMQRHALEGMNDIRLYTPFVHLSKGDIAAE 171

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQ 239
           +  +G      +    S +CY G+          C  C  C  R++ +   +      Y+
Sbjct: 172 SARLG------VDHRTSWSCYKGEN-------LHCGRCGTCVERREAFHLAQVPDPTPYE 218

Query: 240 D 240
           D
Sbjct: 219 D 219


>gi|288925099|ref|ZP_06419035.1| ExsB protein [Prevotella buccae D17]
 gi|288338289|gb|EFC76639.1| ExsB protein [Prevotella buccae D17]
          Length = 217

 Score =  126 bits (315), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 31/236 (13%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMP 65
              SA+++ SGG DS T L     + +    +SFDYG  +   E+       +++     
Sbjct: 1   MKDSAIIV-SGGMDSITLLYD--KKDEIALGISFDYGSNHNAREIPFAQMHCERLG---- 53

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                  +  ++ L  +     SSL            + +N+ +T VP RN I L  A  
Sbjct: 54  ------IKHIVINLDFMHRYFKSSLLDGADAIPEGHYEADNMKSTVVPFRNGIMLSIAIG 107

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           +A    +  ++I     D++ YPDCR + I AI+ A   G   +V V  P   + K +  
Sbjct: 108 IAESHNLKKVLIANHGGDHTIYPDCRPEFIHAIDKAARYGTFINVGVSAPYTDITKGQIA 167

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            + + +G      +   E+ +CY G           C  C  C  R++   E   +
Sbjct: 168 SIGKRLG------IDYRETWSCYKGGV-------VHCGKCGTCIERKEALAEAGIE 210


>gi|315608141|ref|ZP_07883133.1| transcription regulator ExsB [Prevotella buccae ATCC 33574]
 gi|315250110|gb|EFU30107.1| transcription regulator ExsB [Prevotella buccae ATCC 33574]
          Length = 217

 Score =  126 bits (315), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 31/236 (13%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMP 65
              SA+++ SGG DS T L     + +    +SFDYG  +   E+       +++     
Sbjct: 1   MKDSAIIV-SGGMDSITLLYD--KKDEIALGISFDYGSNHNAREIPFAQMHCERLG---- 53

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                  +  ++ L  +     SSL            + +N+ +T VP RN I L  A  
Sbjct: 54  ------IKHIVINLDFMHRYFKSSLLDGADAIPEGHYEADNMKSTVVPFRNGIMLSIAIG 107

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           +A    +  ++I     D++ YPDCR + I AI+ A   G   +V V  P   + K +  
Sbjct: 108 IAESHNLKKVLIANHGGDHTIYPDCRPEFIHAIDKAARYGTFINVGVSAPYTDITKGQIA 167

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            + + +G      +   E+ +CY G           C  C  C  R++   E   +
Sbjct: 168 SIGKRLG------IDYRETWSCYKGGV-------VHCGKCGTCIERKEALAEAGIE 210


>gi|317473659|ref|ZP_07932948.1| ExsB protein [Anaerostipes sp. 3_2_56FAA]
 gi|316898949|gb|EFV20974.1| ExsB protein [Anaerostipes sp. 3_2_56FAA]
          Length = 181

 Score =  126 bits (315), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 74/176 (42%), Positives = 106/176 (60%), Gaps = 13/176 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K   A+++FSGGQDS+TCL WA  +++ V  LSFDYGQ++  EL C   + KK     
Sbjct: 1   MSKPTKAVVVFSGGQDSTTCLFWAKKKYEEVIALSFDYGQKHSDELICAKEICKKYG--- 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLT---KNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                   E +IL +A+L  ++ +SLT     V  +  +   PN+FV GRN++FL FAA 
Sbjct: 58  -------VEHYILDMALLNQLAPNSLTRADIEVDKEAPETGTPNSFVDGRNMLFLTFAAV 110

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
            A +  I  +V GV ++D+SGYPDCRH  I ++ET + L M+    V TPLMW+ K
Sbjct: 111 FAKQRDIHVLVTGVSQSDFSGYPDCRHVFITSLETTLTLAMDYEFEVITPLMWIDK 166


>gi|256059943|ref|ZP_05450128.1| exsB protein [Brucella neotomae 5K33]
 gi|261323915|ref|ZP_05963112.1| queuosine biosynthesis protein queC [Brucella neotomae 5K33]
 gi|261299895|gb|EEY03392.1| queuosine biosynthesis protein queC [Brucella neotomae 5K33]
          Length = 232

 Score =  126 bits (315), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 52/237 (21%), Positives = 81/237 (34%), Gaps = 25/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L++ SGG DS +         +    LSFDYGQR+K EL+      K++         
Sbjct: 2   KTLVICSGGLDSVSLTHKMAAEHELTGLLSFDYGQRHKKELDFAQACAKRLGVPHQIIDI 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     A L   + +           +  +  T VP RN I L  A  +A      
Sbjct: 62  RTIG------ASLTGSALTDDVDVPDGHYAEETMKVTVVPNRNAIMLAIAFGVAAAQKAD 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            + + V   D+  YPDCR   I A +      L   + V +  P +   K +        
Sbjct: 116 AVALAVHGGDHFIYPDCRPGFIEAFQTMQKHALDGYADVKLLAPYVHATKADIVADGAKY 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW----MEFKEKYQD 240
                     E + +CY G           C  C  C  R++ +    ++    Y+D
Sbjct: 176 ------RTPFEATWSCYKGAD-------RHCGRCGTCVERREAFHLAGIDDPTSYED 219


>gi|227498705|ref|ZP_03928849.1| archaeosine biosynthesis protein queC [Acidaminococcus sp. D21]
 gi|226904161|gb|EEH90079.1| archaeosine biosynthesis protein queC [Acidaminococcus sp. D21]
          Length = 233

 Score =  125 bits (313), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 57/241 (23%), Positives = 94/241 (39%), Gaps = 29/241 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDR-VETLSFDYGQRNKVELECRLCVRKKIVELM 64
            +  AL+L SGG DS+TC+S A+       V T+S  YGQ+++ EL+      +K+ +  
Sbjct: 1   MSKKALVLSSGGVDSTTCVSVAVHELGRENVATVSIFYGQKHRKELDAA----QKVADFY 56

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTK-----NVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                 L    I   +    +SHS+           +        +T+VP RN + L   
Sbjct: 57  HVPHYELDLSKIFQYSNCSLLSHSTEEIIHESYEDQIAQNGEGKVSTYVPFRNGLMLSAV 116

Query: 120 ATLAYRL---GITNIVIGVCETDYSGYPD--CRHDTIRAIETAINLGMESHVTVHTPLMW 174
           A+LA  L      +I +G    D +G     C      A+  AI++G      +  P + 
Sbjct: 117 ASLAMSLFEKDDVDIYLGAHADDAAGNAYADCSEAFTDAMGKAISIGTYEQCHLVAPFVE 176

Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           + K    K   ++G         E + +CY G           C +C  C  R + +   
Sbjct: 177 VNKAGIVKKGLELGT------PYELTWSCYEGGDRP-------CGTCGTCIDRARAFAAN 223

Query: 235 K 235
            
Sbjct: 224 G 224


>gi|228471015|ref|ZP_04055859.1| ExsB protein [Porphyromonas uenonis 60-3]
 gi|228307235|gb|EEK16258.1| ExsB protein [Porphyromonas uenonis 60-3]
          Length = 217

 Score =  125 bits (313), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 90/229 (39%), Gaps = 28/229 (12%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           +L+  SGG DS+T L    +       + FDYG ++           +++       ++ 
Sbjct: 4   SLIALSGGVDSTTLLYEYREE--IACAVGFDYGSKHN---------ARELAAAKAICREL 52

Query: 71  LGEDHILPLAILGDISHSSLT----KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                I+PLA +G+   S L     +       + N+ +T VP RN I L   A LA   
Sbjct: 53  EIPYLIIPLAFIGEYFRSDLLLSGGEMQLGDYSEENMSSTVVPFRNGIMLSVLAGLAESR 112

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +  ++I     D++ YPDCR   ++ +  AI  G  + V +  P   L K E       
Sbjct: 113 DLQQVLIANHFGDHAIYPDCRESFVKPMGEAITAGTSNGVKLVAPYTALTKAEIVARGTR 172

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           +G      +   ++++CY G           C  C  C  R   ++   
Sbjct: 173 LG------VPYSKTYSCYQGGE-------RHCGRCGTCRERHDAFVANG 208


>gi|313886018|ref|ZP_07819756.1| protein ExsB [Porphyromonas asaccharolytica PR426713P-I]
 gi|312924548|gb|EFR35319.1| protein ExsB [Porphyromonas asaccharolytica PR426713P-I]
          Length = 217

 Score =  125 bits (313), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 89/229 (38%), Gaps = 28/229 (12%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           +L+  SGG DS+T L    +       + FDYG ++           +++       ++ 
Sbjct: 4   SLIALSGGVDSTTLLYEYREE--VACAVGFDYGSKHN---------ARELAAAKAICREL 52

Query: 71  LGEDHILPLAILGDISHSSLT----KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                I+PLA +G+   S L     +       + N+ +T VP RN I L   A LA   
Sbjct: 53  GIPYLIIPLAFIGEYFRSDLLLSGGEMQLGDYSEENMRSTVVPFRNGIMLSILAGLAESR 112

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +  ++I     D++ YPDCR   +  +  AI  G  + V +  P   L K E       
Sbjct: 113 DLQQVLIANHFGDHAIYPDCRESFVTPMGKAITAGTSNGVKLVAPYTTLTKAEIVARGTR 172

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           +G      +   ++++CY G           C  C  C  R   ++   
Sbjct: 173 LG------VPYGKTYSCYQGGE-------RHCGRCGTCRERHDAFVANG 208


>gi|167754372|ref|ZP_02426499.1| hypothetical protein ALIPUT_02666 [Alistipes putredinis DSM 17216]
 gi|167658997|gb|EDS03127.1| hypothetical protein ALIPUT_02666 [Alistipes putredinis DSM 17216]
          Length = 218

 Score =  125 bits (312), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 30/231 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMPKW 67
             ++++ SGG DS T L   ++       ++FDYG  +   E EC     +++       
Sbjct: 2   KDSVIIVSGGMDSITLLHEKVEE--IALAVTFDYGSNHNKREAECAARHCQQLG------ 53

Query: 68  KDSLGEDHILPLAILGDISHSSLTK----NVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                E  I+PLA +G    SSL +          +  N+ +T VP RN I L  A  LA
Sbjct: 54  ----IEHIIIPLAFIGQYFKSSLLEGADAVPEGHYEAENMKSTVVPFRNGIMLSVACGLA 109

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
               ++ ++I     D++ YPDCR   + ++  A+  G    V +  P   ++K +  ++
Sbjct: 110 ESRKLSKVLIANHGGDHAIYPDCRAGFVHSMSEAMRHGTYIGVQIDAPYTGIRKSDIARI 169

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            + +G      L    +++CY G           C  C  C  R++   + 
Sbjct: 170 GKRLG------LDYSTTYSCYKGGEK-------HCGKCGTCVERKEALRDA 207


>gi|282889960|ref|ZP_06298495.1| hypothetical protein pah_c008o049 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500153|gb|EFB42437.1| hypothetical protein pah_c008o049 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 231

 Score =  125 bits (312), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 68/236 (28%), Positives = 108/236 (45%), Gaps = 25/236 (10%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +K    A+++ SGG DSS CL+ A+  F  + V +LSF Y QR+  ELE    + +    
Sbjct: 1   MKLQKKAVVIHSGGMDSSICLALAIRTFSVENVLSLSFIYDQRHSSELEQAKKICQ---- 56

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNV-AMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                     +  IL +  L +I+ ++LT     ++  +   PNT V GRN +     A 
Sbjct: 57  ------SWNVDHIILSIPCLKEITTNALTDTSLPIQCGNGEAPNTLVVGRNGLMAQLGAI 110

Query: 122 LAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            A+ LG   I +G+   + +        R               +   T+ TPL+ + K 
Sbjct: 111 HAHELGAHCIYMGIIGVEGNHSGYRDCSRAYMDLKQTLLRLDLDDHLFTIETPLVDMSKK 170

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           +T +LAQ++G   ++  +L E+ TCY G          GC  CPAC LR +G  +F
Sbjct: 171 KTLELAQEMG---VLEFLLNETITCYEGLEK------LGCQKCPACILRNEGIRQF 217


>gi|282878837|ref|ZP_06287604.1| protein ExsB [Prevotella buccalis ATCC 35310]
 gi|281299045|gb|EFA91447.1| protein ExsB [Prevotella buccalis ATCC 35310]
          Length = 228

 Score =  125 bits (312), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 57/247 (23%), Positives = 94/247 (38%), Gaps = 34/247 (13%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIV 61
           +  K    +L++ SGG DS T L     R      +SFDYG  + + E+        ++ 
Sbjct: 7   ERNKMEKDSLIIVSGGMDSITMLYEYQQR--IAIGVSFDYGSNHNQKEIPLAKMHCDRLG 64

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLV 117
                         ++PL+ + D   SSL +          ++ N+ +T VP RN I L 
Sbjct: 65  ----------IRHIVIPLSFMHDYFKSSLLEGDDAIPEGHYEEENMKSTVVPFRNGIMLA 114

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
               LA    +  ++I     D++ YPDCR + I +   A+  G    +T+  P   + K
Sbjct: 115 VGCGLAVSNHLKYVMIANHGGDHTIYPDCRPEFIDSFSQAMAAGTFEGITILAPYTQISK 174

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            E     + +G          E+ +CY G           C  C  C  R++        
Sbjct: 175 GEIALRGKKLGIN------YAETWSCYKGGDK-------QCGKCGTCVERKEALAFAGIN 221

Query: 238 ----YQD 240
               Y+D
Sbjct: 222 DDTPYED 228


>gi|260880908|ref|ZP_05403120.2| ExsB protein [Mitsuokella multacida DSM 20544]
 gi|260849899|gb|EEX69906.1| ExsB protein [Mitsuokella multacida DSM 20544]
          Length = 210

 Score =  124 bits (311), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 60/223 (26%), Positives = 95/223 (42%), Gaps = 33/223 (14%)

Query: 25  LSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGD 84
           ++ A  +   V  +SF+Y QR+ +ELE    +                + H++    +  
Sbjct: 1   MAVAKSKGYDVYPISFNYHQRHSIELEGAKKIA----------SYYGVKKHLIIETNMEA 50

Query: 85  ISHSSLTKNVAMKIQDNNLPN----TFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDY 140
           I  S+LT       + +   +    T+VP RN+IFL +A   A  LG T++ IGV   DY
Sbjct: 51  IGGSALTDEKIEVPEGDVNRHSVPPTYVPARNLIFLSYAMGYAEVLGATHVYIGVNSVDY 110

Query: 141 SGYPDCRHDTIRAIETAINLGME------SHVTVHTPLMWLKKYETWKLAQDIGGQDLVN 194
           SGYPDCR + I   +   +            +T+ TPL  L K +   L   +G      
Sbjct: 111 SGYPDCRPEFIEKFQALADYATTATAVKGQKITIETPLQDLSKKDIVLLGTKLGA----- 165

Query: 195 LILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
              + +H+CY G           C  C +C LR +G+ E   +
Sbjct: 166 -PFQFTHSCYKGGEK-------ACGICDSCKLRLRGFAEAGVE 200


>gi|284048976|ref|YP_003399315.1| exsB protein [Acidaminococcus fermentans DSM 20731]
 gi|283953197|gb|ADB48000.1| exsB protein [Acidaminococcus fermentans DSM 20731]
          Length = 232

 Score =  124 bits (310), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/239 (23%), Positives = 90/239 (37%), Gaps = 21/239 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
               AL+L SGG DS+TC+S A++ F  + V T+S  YGQ+++ ELEC   V +      
Sbjct: 1   MNKKALVLSSGGVDSTTCVSVAVEEFGKENVSTVSIFYGQKHRKELECARKVAEYYGLPH 60

Query: 65  PKWKDSLGEDHI-LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
            +   S    +    L           +    +        +T+VP RN + L   A+LA
Sbjct: 61  YELDLSKIFQYSNCSLLDHSTEEIVHESYEQQIAENGEGKVSTYVPFRNGLMLSAVASLA 120

Query: 124 YRLG-----ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             +         I     +   + Y DC    I A+  AI+LG  +   +  P     K 
Sbjct: 121 MSIYEKDDVSIFIGAHADDAAGNAYADCSEAFIGAMGKAISLGTYNQCHIVAPFASCSKA 180

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
              K   ++          + + +CY G           C +C  C  R + +     K
Sbjct: 181 GVVKRGLELHT------PYDLTWSCYEGGDKP-------CGTCGTCIDRARAFAANGVK 226


>gi|254713616|ref|ZP_05175427.1| exsB protein [Brucella ceti M644/93/1]
 gi|254716030|ref|ZP_05177841.1| exsB protein [Brucella ceti M13/05/1]
 gi|261217798|ref|ZP_05932079.1| queuosine biosynthesis protein queC [Brucella ceti M13/05/1]
 gi|261321354|ref|ZP_05960551.1| queuosine biosynthesis protein queC [Brucella ceti M644/93/1]
 gi|260922887|gb|EEX89455.1| queuosine biosynthesis protein queC [Brucella ceti M13/05/1]
 gi|261294044|gb|EEX97540.1| queuosine biosynthesis protein queC [Brucella ceti M644/93/1]
          Length = 232

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 80/237 (33%), Gaps = 25/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L++ SGG DS +         +    LSFDYG R+K EL+      K++         
Sbjct: 2   KTLVICSGGLDSVSLAHKMAAEHELTGLLSFDYGLRHKKELDFAQACAKRLGVPHQIIDI 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     A L   + +           +  +  T VP RN I L  A  +A      
Sbjct: 62  RTIG------ASLTGSALTDDVDVPDGHYAEETMKVTVVPNRNAIMLAIAFGVAAAQKAD 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            + + V   D+  YPDCR   I A +      L   + V +  P +   K +        
Sbjct: 116 AVALAVHGGDHFIYPDCRPGFIEAFQTMQKHALDGYADVKLLAPYVHATKADIVADGAKY 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW----MEFKEKYQD 240
                     E + +CY G           C  C  C  R++ +    ++    Y+D
Sbjct: 176 ------RTPFEATWSCYKGAD-------RHCGRCGTCVERREAFHLAGIDDPTSYED 219


>gi|118592127|ref|ZP_01549521.1| ExsB protein [Stappia aggregata IAM 12614]
 gi|118435423|gb|EAV42070.1| ExsB protein [Stappia aggregata IAM 12614]
          Length = 219

 Score =  123 bits (307), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 45/223 (20%), Positives = 78/223 (34%), Gaps = 29/223 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS T         + +  +SFDYGQR+K EL+       ++            E  ++ 
Sbjct: 1   MDSVTLAHKVAREHELIGLVSFDYGQRHKKELDYAKACADELKT----------EHILID 50

Query: 79  LAILG----DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
           ++ +G      + +           +  +  T VP RN I L  A  +A   G   +   
Sbjct: 51  ISNIGRQLTGSALTDNLDVPDGHYAEETMKITVVPNRNAIMLSIAFGIASARGAEAVATA 110

Query: 135 VCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
           V   D+  YPDCR     + E      L     +++ TP +   K +       +G    
Sbjct: 111 VHGGDHFIYPDCRPAFTESFETMQRHALEGMGEISLFTPYVHTSKADIAAEGLRLG---- 166

Query: 193 VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
             +   ++ +CY G           C  C  C  R++ +    
Sbjct: 167 --VDYRKTWSCYKGGE-------VHCGRCGTCVERREAFHLAG 200


>gi|2921156|gb|AAC05081.1| aluminum resistance protein [Arthrobacter viscosus]
          Length = 187

 Score =  123 bits (307), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 79/174 (45%), Positives = 117/174 (67%), Gaps = 12/174 (6%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           ++FSGGQDS+TCL WA++RF+ VE ++FDY QR+ +E+EC   + K++            
Sbjct: 24  VVFSGGQDSTTCLFWAMERFEEVEAVTFDYNQRHSLEIECAQKIAKELG----------I 73

Query: 73  EDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
             HIL +++L  ++ ++LT++       +D  LP+TFVPGRN++FL FA  LA ++G  +
Sbjct: 74  THHILDMSLLNQLAPNALTRSDIAVEDGEDGELPSTFVPGRNLLFLSFAGVLASQIGAKH 133

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           IV GVCETD+SGYPDCR   I+++   +NL M+    + TPLMWL K ETW+LA
Sbjct: 134 IVTGVCETDFSGYPDCRDVFIKSLNVTLNLSMDQSFVIDTPLMWLNKEETWELA 187


>gi|282881611|ref|ZP_06290280.1| protein ExsB [Prevotella timonensis CRIS 5C-B1]
 gi|281304597|gb|EFA96688.1| protein ExsB [Prevotella timonensis CRIS 5C-B1]
          Length = 218

 Score =  123 bits (307), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 90/236 (38%), Gaps = 30/236 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMP 65
               +L++ SGG DS T L     R      +SFDYG  + + E+       +++     
Sbjct: 1   MEKDSLIIVSGGMDSITMLYEYQQR--IAIGVSFDYGSNHNQKEIPLAKMHCERLG---- 54

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                     ++PL+ + D   SSL +          ++ N+ +T VP RN I L     
Sbjct: 55  ------IRHIVIPLSFIHDYFKSSLLEGDDAIPEGHYEEENMKSTVVPFRNGIMLAVGCG 108

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           LA    +  ++I     D++ YPDCR   I +   A+  G    +T+  P   + K E  
Sbjct: 109 LAVSNHLKYVMIANHGGDHTIYPDCRPAFIDSFSQAMTAGTFEGITILAPYTRISKGEIA 168

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
              + +G          E+ +CY G           C  C  C  R++       K
Sbjct: 169 LRGKKLGIN------YAETWSCYKGGDK-------QCGKCGTCVERKEALAFAGIK 211


>gi|327310688|ref|YP_004337585.1| exsB protein [Thermoproteus uzoniensis 768-20]
 gi|326947167|gb|AEA12273.1| exsB protein [Thermoproteus uzoniensis 768-20]
          Length = 496

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 54/233 (23%), Positives = 93/233 (39%), Gaps = 19/233 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   AL++ SGG DS+T  +  L +   V  L F+Y  R+  E   R  VR+    L   
Sbjct: 250 RRRRALVVASGGLDSTTAAAALLRQGYEVALLHFNY--RHVAEDPERRAVREISKALGTP 307

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +   +     LA    +        V M  +     + +VP RN +F+  A  LA   
Sbjct: 308 LIE--VDMDFFKLAGRSPLLGEGEINRVDMGREGAEFAHEWVPARNFVFIALAVALAEAW 365

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINL--GMESHVTVHTPLMWLKKYETWKLA 184
           G   + +G+   +   YPD   + +R +  A+    G +  V +  P+  L K+E  +L 
Sbjct: 366 GYDYVALGINMEEAGAYPDNEMELVRLLNQALPYATGPQRRVQLLMPVGGLVKHEIVRLG 425

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            ++G        L  + +CY        +    C  C  CY+R+  +     +
Sbjct: 426 LEVGA------PLHLTWSCYD-------KGPKHCGRCGPCYMRRLAFKINGVR 465


>gi|323143038|ref|ZP_08077744.1| protein ExsB [Succinatimonas hippei YIT 12066]
 gi|322417232|gb|EFY07860.1| protein ExsB [Succinatimonas hippei YIT 12066]
          Length = 230

 Score =  121 bits (304), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 64/243 (26%), Positives = 105/243 (43%), Gaps = 39/243 (16%)

Query: 10  SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            AL+L SGG DS+TCL++A+D+   + V ++S  YGQ++K EL+C   +           
Sbjct: 3   KALVLSSGGVDSTTCLAFAVDKLGAENVSSVSIFYGQKHKKELQCAAQLADYYK------ 56

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQD---------NNLPNTFVPGRNIIFLVF 118
                + + L L+++   S+ +L +N +  I++         +   NT+VP RN +FL  
Sbjct: 57  ----VKHYELDLSMMFKNSNCALLENSSQDIEEGSYSTQIAVHGKVNTYVPFRNGLFLAS 112

Query: 119 AATLAYRLGITNIVIGVCETDY-----SGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
            A+LA  +   + V             + Y DC  + I A+  AI+LG  S   +  P  
Sbjct: 113 VASLAGSIYPDDEVEIYLGAHADDAALNAYADCSMEFIEAMNKAISLGTYSKERIVAPFA 172

Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
              K E  K    +       +  E + +CY GK          C  C  C  R+K +  
Sbjct: 173 GQNKAEVVKTGLKL------KVPYEMTWSCYEGKDKP-------CGKCATCIDRRKAFEA 219

Query: 234 FKE 236
              
Sbjct: 220 NGA 222


>gi|78044764|ref|YP_359799.1| exsB protein [Carboxydothermus hydrogenoformans Z-2901]
 gi|110816220|sp|Q3ADI5|QUEC_CARHZ RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|77996879|gb|ABB15778.1| exsB protein [Carboxydothermus hydrogenoformans Z-2901]
          Length = 215

 Score =  121 bits (302), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 54/234 (23%), Positives = 92/234 (39%), Gaps = 34/234 (14%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A++L S G DS+  L++ +  F  V  L+F+YGQ+           RK+I        
Sbjct: 2   EKAIVLLSAGLDSTVSLAYGVRNFQVVLGLTFNYGQKAS---------RKEIEHSKKILD 52

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQ----------DNNLPNTFVPGRNIIFLVF 118
                  ++ L  L  I+ +SL                     ++   +VP RN +F+  
Sbjct: 53  YYGIPQEVIELPFLKKITKTSLVAEDQEIPTGIDLESAAAVKTSMEKVWVPNRNGLFINI 112

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
           AA  A  LG   I+ G    +   + D   + + A+  A+     +HV V +    L+K 
Sbjct: 113 AAAYAESLGAKYIITGFNAEEAKTFSDNSREFVDAVNHALKYSTLNHVQVVSFTQNLEKS 172

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYL--RQKG 230
           E ++L  ++G        L+   +CY G  +        C  C +C    R +G
Sbjct: 173 EIYRLGVELGA------PLDLIWSCYYGGDEM-------CGVCESCLRLKRARG 213


>gi|16120215|ref|NP_395803.1| succinoglycan biosynthesis [Halobacterium sp. NRC-1]
 gi|169237475|ref|YP_001690679.1| hypothetical protein OE5195R [Halobacterium salinarum R1]
 gi|74568513|sp|Q9HHN8|QUEC_HALSA RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=Archaeosine biosynthesis protein queC; AltName:
           Full=PreQ(0) synthase
 gi|10584341|gb|AAG20938.1| succinoglycan biosynthesis [Halobacterium sp. NRC-1]
 gi|167728702|emb|CAP15546.1| hypothetical protein OE5195R [Halobacterium salinarum R1]
          Length = 229

 Score =  121 bits (302), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 56/233 (24%), Positives = 97/233 (41%), Gaps = 21/233 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           A  A++L SGG DS+T  + A +    V  L   YGQ  + E +   C   +   L    
Sbjct: 3   AKRAVVLASGGMDSATAAAVAHNAGYEVYMLHTSYGQ--QTEHKEHECATAQAAALGAAD 60

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNV-AMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              L  DH   L+ +G  S +     V    ++ + +P ++VP RN   L  A + A   
Sbjct: 61  FLHLTTDH---LSKIGASSLTDDEMAVADADMESDEIPTSYVPFRNANLLAMATSYAEAN 117

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKLA 184
               + IG    D+SGYPDC+     A +  +  G +    ++++ P +   K +  +  
Sbjct: 118 DCEAVFIGAHSEDFSGYPDCQPAFFEAFQQTVAAGTKPDTEISINAPFVDWSKTDIAERG 177

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            ++G      +  E + +CY  +          C +C AC  R + +    E+
Sbjct: 178 LELG------VPYEHTWSCYRAEAP-------ACGTCDACAFRLQAFQNLGER 217


>gi|305663007|ref|YP_003859295.1| Queuosine synthesis [Ignisphaera aggregans DSM 17230]
 gi|304377576|gb|ADM27415.1| Queuosine synthesis [Ignisphaera aggregans DSM 17230]
          Length = 286

 Score =  121 bits (302), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 53/242 (21%), Positives = 99/242 (40%), Gaps = 21/242 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM-P 65
           K   A+ + SGG DS   +   L R   V  LSFDYGQ+   EL     + +KI  +   
Sbjct: 13  KPCVAVAVVSGGPDSICYMVRWLYRGCDVYALSFDYGQKGSKELRVVSDLLRKISRIAVD 72

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +    + E  I+ ++ + ++   +   + ++ +++   P+  VP RNI+ L  A   AY 
Sbjct: 73  RGWGRVVEHRIIDMSFMKNLWRGTQLTDESVDVEETYAPSVVVPIRNIVMLSIATAYAYT 132

Query: 126 L-----GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           L      +   VI   + +     D  ++      +   +              L+K E 
Sbjct: 133 LLEQNPSLNIYVIYGAQYNDIVPRDYSYEPRYPDCSPECIEAIQLAYRLCHFRMLRKIEI 192

Query: 181 WKLAQDIGGQ--------DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
           W  +++  G+        DL+  ++ ++ +CYL          Y C  C +C  R + ++
Sbjct: 193 WSPSREGMGKPDILKMCRDLIGDLIYDTWSCYLSHD-------YHCGRCESCRNRHRAFI 245

Query: 233 EF 234
           E 
Sbjct: 246 EA 247


>gi|297617393|ref|YP_003702552.1| exsB protein [Syntrophothermus lipocalidus DSM 12680]
 gi|297145230|gb|ADI01987.1| exsB protein [Syntrophothermus lipocalidus DSM 12680]
          Length = 217

 Score =  120 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 84/221 (38%), Gaps = 26/221 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+ L SGG DS+ C   AL   + +  L+ DYGQ+ +          +++         
Sbjct: 3   KAITLLSGGLDSTLCTVLALRDMEVILALTVDYGQKART---------REVESAGRIAAF 53

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 ++    L     +  +     +    +    +VP RN +F+  AA  A  +G  
Sbjct: 54  YNIPHRVVEAGFLR----TFASGLTRAERSTRSSREVWVPNRNGLFINIAACYAEEMGAE 109

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +++G    +   +PD   D + A+  +++    + V V +  M + K E  + A  +G 
Sbjct: 110 AVLVGFNREEAVDFPDNSPDFVSAVNRSLSYSTRNQVRVISYTMEMDKTEMLREAIRLG- 168

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
                + L  + +CY             C  C +C L  K 
Sbjct: 169 -----IPLHYTWSCYEDGPSP-------CGVCASCRLLAKA 197


>gi|332299348|ref|YP_004441269.1| exsB protein [Porphyromonas asaccharolytica DSM 20707]
 gi|332176411|gb|AEE12101.1| exsB protein [Porphyromonas asaccharolytica DSM 20707]
          Length = 217

 Score =  120 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/229 (22%), Positives = 89/229 (38%), Gaps = 28/229 (12%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           +L+  SGG DS+T L    +       + FDYG ++           +++       ++ 
Sbjct: 4   SLIAHSGGVDSTTLLYEYREE--VACAVGFDYGSKHN---------ARELAAAKAICREL 52

Query: 71  LGEDHILPLAILGDISHSSLT----KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                I+PLA + +   S L     +       + N+ +T VP RN I L   A LA   
Sbjct: 53  DIPYLIIPLAFIEEYFRSDLLLSGGEMQLGDYSEENMRSTVVPFRNGIMLSVLAGLAESR 112

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +  ++I     D++ YPDCR   ++ +  AI  G  + V +  P   L K E       
Sbjct: 113 DLQQVLIANHFGDHAIYPDCRESFVKPMGEAITAGTSNGVKLVAPYTALTKAEIVARGTR 172

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           +G      +   ++++CY G           C  C  C  R   ++   
Sbjct: 173 LG------VPYGKTYSCYQGGE-------RHCGRCGTCRERHDAFVANG 208


>gi|317051375|ref|YP_004112491.1| exsB protein [Desulfurispirillum indicum S5]
 gi|316946459|gb|ADU65935.1| exsB protein [Desulfurispirillum indicum S5]
          Length = 216

 Score =  120 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/231 (21%), Positives = 86/231 (37%), Gaps = 17/231 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRV-ETLSFDYGQRN-KVELECRLCVRKKIVELM 64
             PSA+ L SGG DS+  L   L     V   L+  YGQ   + E+     +   +   +
Sbjct: 1   MKPSAVALLSGGMDSTCALLKYLHDGGVVRHALTMAYGQLAQEKEIAAAAAICDHLG--I 58

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
           P     L     L  + L   +          +  + +  + +VP RN +F+  AA  A 
Sbjct: 59  PHETVELPFLARLSNSSLNRGTIPENIDINDTRQSEQSARSVWVPNRNGLFINIAAVFAE 118

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            +G  +I+ G    +   +PD   D + A   A++      + V +  + + K E     
Sbjct: 119 SMGCQHIITGFNVEEAQTFPDNSRDFLMAANGALHFSTLDTLFVVSGTIDMDKKEIA--- 175

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
              G        +E   +CY G+          C +C +C   ++   E +
Sbjct: 176 ---GYLMRNAFPMELIWSCYKGEEVP-------CGTCESCLRMKRAIEEAQ 216


>gi|313891425|ref|ZP_07825041.1| protein ExsB [Dialister microaerophilus UPII 345-E]
 gi|329121409|ref|ZP_08250034.1| transcription regulator ExsB [Dialister micraerophilus DSM 19965]
 gi|313120200|gb|EFR43376.1| protein ExsB [Dialister microaerophilus UPII 345-E]
 gi|327469699|gb|EGF15166.1| transcription regulator ExsB [Dialister micraerophilus DSM 19965]
          Length = 230

 Score =  120 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 91/236 (38%), Gaps = 20/236 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDR-VETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             A++L SGG DS+TC+S A+D+     V T S  YGQ+++ ELEC   V +       +
Sbjct: 2   KRAIILSSGGVDSTTCISVAVDKLGRENVATASIFYGQKHEKELECARKVAQFYNLKHYE 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  +    +     +                 +++    T+VP RN + L  AA+LA  +
Sbjct: 62  FNLAQVLQYSNCPLLAKSTKEIEHASYEEQVRENSGKVATYVPFRNGLMLSVAASLAASI 121

Query: 127 -----GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
                    I     +   + Y DC  + ++++  AI +G    V +  P     K    
Sbjct: 122 FENEETGIYIGAHADDAAGNAYADCSEEFLKSMNDAIMIGTYEKVKLVFPFANTNKAGVV 181

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                +          E + +CY G           C +C  C  RQK + E   K
Sbjct: 182 ATGLKLKT------PYELTWSCYEGGEKP-------CGTCGTCIDRQKAFEENGVK 224


>gi|237751000|ref|ZP_04581480.1| queuosine biosynthesis protein queC [Helicobacter bilis ATCC 43879]
 gi|229373445|gb|EEO23836.1| queuosine biosynthesis protein queC [Helicobacter bilis ATCC 43879]
          Length = 213

 Score =  119 bits (297), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 56/226 (24%), Positives = 89/226 (39%), Gaps = 20/226 (8%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMPKWKDS 70
           L+LFSGG DS+T L W+         L F Y   +   E++  + + K           +
Sbjct: 3   LVLFSGGVDSTTALFWSKKE-CATHALIFKYPSLHNKREIDAAVQICKD-----ENVSYT 56

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           L +   + +     +  +S            ++    VP RN IFL  AA LA  LG   
Sbjct: 57  LLDMSSVFVGFRSALLQNSSESIPQDSYNLESMAKLVVPFRNGIFLSVAAGLAESLGYKE 116

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV+     D+  YPDC    I ++  +I  G    V + +P     K E  KL   +G  
Sbjct: 117 IVLANHAGDHPLYPDCTQSFIDSMNESIMQGSGGAVKLCSPFCNWDKKEIVKLGLSLG-- 174

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
               +   ++++CY G           CN+CP C    + ++    
Sbjct: 175 ----VDYTKTYSCYRGGEK-------HCNTCPTCIESNESFLANGI 209


>gi|161527552|ref|YP_001581378.1| ExsB family protein [Nitrosopumilus maritimus SCM1]
 gi|160338853|gb|ABX11940.1| ExsB family protein [Nitrosopumilus maritimus SCM1]
          Length = 224

 Score =  119 bits (297), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 48/243 (19%), Positives = 88/243 (36%), Gaps = 35/243 (14%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGG DS  C    L     +  ++F YGQ+  +E+       KK+        
Sbjct: 2   KKAVVVFSGGVDS-VCAVSFLKSKYELYGITFSYGQKANMEISATKSFAKKLG------- 53

Query: 69  DSLGEDHILPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             L +  I+ +  + ++   S++  +   KI      +  VP RN +FL  A+  AY L 
Sbjct: 54  --LKQHKIIDIGFMKELYGDSNVLTSSKRKIPSKFEYSIVVPIRNAVFLSVASAWAYTLN 111

Query: 128 ITNIVIGVCETDYSGYPDCRHD-------TIRAIETAINLGMESHVTVHTPLM-WLKKYE 179
            + +V G    D                   +     IN  +   + + +P    L K +
Sbjct: 112 ASLVVYGAHTGDKYYPDCRPAFAKKLESAFNQGEIDGINSKIRKKIKIWSPYREGLSKSD 171

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK---- 235
             K  + +     +   +  + +CY             C  C +C  R+  + +      
Sbjct: 172 LLKKGKKV-----LGDSIFRTWSCY-------SNKKLHCGVCESCNNRKIAFEKAGVTDK 219

Query: 236 EKY 238
            KY
Sbjct: 220 TKY 222


>gi|147921307|ref|YP_684879.1| succinoglycan biosynthesis regulator [uncultured methanogenic
           archaeon RC-I]
 gi|110620275|emb|CAJ35553.1| succinoglycan biosynthesis regulator [uncultured methanogenic
           archaeon RC-I]
          Length = 222

 Score =  118 bits (296), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 75/235 (31%), Gaps = 35/235 (14%)

Query: 14  LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
           + S G DS        D       ++FDYGQR            K+I             
Sbjct: 1   MLSSGLDSVVAFKKEHDEHGVALAITFDYGQRAAS---------KEIEMARQICARYHVR 51

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQD-------------NNLPNTFVPGRNIIFLVFAA 120
             ++ L  L  I+ ++L    A   +                    +VP RN  F+  AA
Sbjct: 52  HEVIELPWLKQITRTALVSRQAEVPEPTEAELDEIKGRALETAHLVWVPNRNGAFINIAA 111

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
                 G   IV G    + + +PD     + A+  ++ L  E  V V  P++   K E 
Sbjct: 112 AFGDAYGYNRIVCGFNAEEGATFPDNTPAYVDAVNKSLALSCEKQVQVVAPVIHFDKEEI 171

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
            +    I         L+ S +CY             C  C +C  R + +    
Sbjct: 172 IREGVRI------EAPLDLSWSCYFAGEKP-------CGKCESCMRRARAFKRAG 213


>gi|46204970|ref|ZP_00209643.1| COG0603: Predicted PP-loop superfamily ATPase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 175

 Score =  118 bits (295), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 93/162 (57%), Positives = 126/162 (77%)

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
           +A LG+IS ++LT++  +    + LPNTFVPGRN+ FL FAA LA+R G+ +IV G+CET
Sbjct: 1   MAALGEISDTALTRDSEIAFAQDGLPNTFVPGRNLAFLTFAAALAFRRGLRHIVGGMCET 60

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
           DYSGYPDCR DTI+A++ A+NLGME    +HTPLMWL K +TW LA+++GG+ LV+LI+E
Sbjct: 61  DYSGYPDCRDDTIKALQVALNLGMERRFVLHTPLMWLDKAQTWSLAEELGGRPLVDLIVE 120

Query: 199 ESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
           +SHTCYLG+R +R+ WGYGC +CPAC LR KG+  ++    D
Sbjct: 121 DSHTCYLGERGQRHAWGYGCGTCPACDLRAKGFARYRAARTD 162


>gi|187940192|gb|ACD39320.1| hypothetical protein PACL_0661 [Pseudomonas aeruginosa]
          Length = 222

 Score =  118 bits (295), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 94/230 (40%), Gaps = 20/230 (8%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           ++ K+    ++L SGG DS+ CL  A  R   V +L   Y Q + VEL+       +   
Sbjct: 10  EVEKEKRKIVVLHSGGLDSTVCLLLAHSRGHEVVSLGVSYNQHHHVELDYAAAQCARYGI 69

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                  +  +   +              KN +M      + + F+PGRN IFL+ A+  
Sbjct: 70  ERKIVSVAWSKPARVI------------PKNRSMAEIKKGVSSAFLPGRNGIFLMLASAE 117

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A  +G   +  G+   D+SGYPDCR + I +    ++  +     +  PL    K +  K
Sbjct: 118 AAGIGADEVWTGINSVDFSGYPDCRPEFIESFRKMLSYAIPKGPKLSAPLQKKSKPQIAK 177

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
           LA  +G Q        ++ +CY             C +C AC L +  W 
Sbjct: 178 LAHRLGLQ------RHDTWSCYRP--KIAEAGFVPCGACDACKLHEFAWQ 219


>gi|110636377|ref|YP_676585.1| exsB protein [Mesorhizobium sp. BNC1]
 gi|118574288|sp|Q11B05|QUEC_MESSB RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|110287361|gb|ABG65420.1| exsB protein [Chelativorans sp. BNC1]
          Length = 232

 Score =  118 bits (295), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 49/237 (20%), Positives = 80/237 (33%), Gaps = 25/237 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              ++ SGG DS +              +SFDYGQR+K EL+      +++         
Sbjct: 2   KTFVICSGGLDSVSLAHKVAVEKTLAGLISFDYGQRHKKELDFARACAQRLDVRHMIIDI 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
               +       L   + +           ++ +  T VP RN I L  A  +A      
Sbjct: 62  RAVGE------GLAGSALTDEIDVPNGHYAEDTMRITVVPNRNAIMLAIAFGVAAAQNAD 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            +   V   D+  YPDCR   I A +   A  L   + + ++ P + L K          
Sbjct: 116 AVATAVHGGDHFIYPDCRPGFIEAFQAMQAQALDGYAKIALYAPYVNLSKANIVSDGVRH 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQD 240
                     E + +CY G +         C  C  C  R++ +          Y+D
Sbjct: 176 ------RTPFEATWSCYKGGKH-------HCGRCGTCVERREAFDLAGVTDPTTYED 219


>gi|78189278|ref|YP_379616.1| ExsB [Chlorobium chlorochromatii CaD3]
 gi|78171477|gb|ABB28573.1| ExsB [Chlorobium chlorochromatii CaD3]
          Length = 218

 Score =  118 bits (294), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 58/224 (25%), Positives = 89/224 (39%), Gaps = 29/224 (12%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHI-L 77
            DS    + A      +  +  +YGQR           ++++            +  + +
Sbjct: 1   MDSLVTTAIAQQAGFELAAMHVNYGQRTM---------QRELNSFRAICSHYSIQQRLEI 51

Query: 78  PLAILGDISHSSLTK----NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
               LG I  SSLT          ++ + +P ++VP RN  FL  A + A  +G   I I
Sbjct: 52  NADFLGKIGGSSLTDLSMPVSVANLESHAIPASYVPFRNAGFLSMAVSWAEVIGAERIFI 111

Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMES--HVTVHTPLMWLKKYETWKLAQDIGGQD 191
           G  E D SGYPDCR     A    I LG +   H+ V TPL+ LKK+E  +   ++    
Sbjct: 112 GAVEEDSSGYPDCRKIFYEAFNRVIELGTKPETHIEVVTPLIALKKWEIVRKGIELHA-- 169

Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
                   S +CY          G  C  C +C LR + + +  
Sbjct: 170 ----PFAFSWSCYK-------NEGQACGVCDSCALRLRAFEQAG 202


>gi|156937660|ref|YP_001435456.1| exsB protein [Ignicoccus hospitalis KIN4/I]
 gi|156566644|gb|ABU82049.1| exsB protein [Ignicoccus hospitalis KIN4/I]
          Length = 260

 Score =  118 bits (294), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 61/241 (25%), Positives = 99/241 (41%), Gaps = 32/241 (13%)

Query: 14  LFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           L SGG DS+T  + A+++F  D    L+  YGQR+  EL+    V K           S 
Sbjct: 6   LVSGGMDSATAFADAINKFNPDVKVALTVVYGQRHARELKAAAEVAKFYGAQHLVVDLSD 65

Query: 72  GEDHILPLAIL--GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             + +  ++ L  G     +      +           V   +   ++    +    G+ 
Sbjct: 66  LFEKVKEVSALLGGRGVPEAEELVPGLVPPTYVPQRNAVLLASAGAILEKLMIERNDGLG 125

Query: 130 NIVIGVCETDYSG----YPDCRHDTIRAIETAINLG-----------MESHVTVHTPLMW 174
            I +G   TDY+     YPD R + + A+E A+N G            E+ +T++ P + 
Sbjct: 126 VISVGFHGTDYAPGEPVYPDTRPEFVEAMERALNEGSSVVFNFKRAGREAKITIYAPFVR 185

Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           LKK +  K A ++G      + LE + TCY G           C +CPAC  R + +ME 
Sbjct: 186 LKKKDVVKRALELG------VPLELTWTCYRGGDRP-------CGTCPACVSRLRAFMEA 232

Query: 235 K 235
            
Sbjct: 233 G 233


>gi|167950640|ref|ZP_02537714.1| exsB protein [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 213

 Score =  118 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 53/172 (30%), Positives = 77/172 (44%), Gaps = 8/172 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +  A  A++L SGG DS+T L+ A  +      LS  YGQR+  EL+    V + +  + 
Sbjct: 1   MSLAKRAVVLLSGGLDSATVLAMARQQGFECHALSMLYGQRHAAELDAARQVAQALGAVD 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            K  +       + L  +G  + +     V     +   P  +VP RN +FL  A   A 
Sbjct: 61  HKLIN-------IGLDDIGGSALTDEQIAVPKTPSEGIPPT-YVPARNTVFLSLALGWAE 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
            L   +I IGV   DYSGYPDCR + I A E   NL  ++ V      +   
Sbjct: 113 VLEAQDIFIGVNAVDYSGYPDCRPEFIVAFEQLANLATKAGVEGRRIHIHTP 164


>gi|254501553|ref|ZP_05113704.1| exsB protein [Labrenzia alexandrii DFL-11]
 gi|222437624|gb|EEE44303.1| exsB protein [Labrenzia alexandrii DFL-11]
          Length = 219

 Score =  117 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 80/232 (34%), Gaps = 33/232 (14%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS T         + +  +SFDYGQR+K EL+        +            E  ++ 
Sbjct: 1   MDSVTLAHKIAQENELIGLISFDYGQRHKKELDYAKACADALNT----------EHILID 50

Query: 79  LAILG----DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
           +  +G      + +           ++ +  T VP RN I L  A  +A   G   +   
Sbjct: 51  ITNIGRQLTGSALTDNIDVPDGHYAEDTMKITVVPNRNAIMLTIAYGIASARGAEAVATA 110

Query: 135 VCETDYSGYPDCRHDTIRAIETAIN--LGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
           V   D+  YPDCR     + E      L     + ++TP + + K +       +G    
Sbjct: 111 VHGGDHFIYPDCRPAFTESFEEMQRNALEGMGEIKLYTPYVRVSKADIAAEGAKLG---- 166

Query: 193 VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQD 240
             +   +S +CY G           C  C  C  R++ +          Y D
Sbjct: 167 --VDHTKSWSCYKGGD-------IHCGRCGTCVERREAFHLAGVDDPTTYAD 209


>gi|167043380|gb|ABZ08083.1| putative ExsB [uncultured marine crenarchaeote HF4000_ANIW141O9]
          Length = 233

 Score =  117 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 89/236 (37%), Gaps = 23/236 (9%)

Query: 7   KAPSALLLFSGGQDS-STCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +   A+++FSGG DS STC    L +   +  +SF YGQ+   E++      K +     
Sbjct: 9   EMKKAVVVFSGGIDSVSTCTY--LKQKYELYGISFLYGQKANQEIKKAKSFAKILG---- 62

Query: 66  KWKDSLGEDHILPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                L E  ++ +  +  +   ++   +   KI      +  VP RN IFL  A   A+
Sbjct: 63  -----LKEHKVVDINFMKKLYGDTNALTSSKKKIPSKFNYSVVVPIRNGIFLSIATAWAF 117

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIR---AIETAINLGMESHVTVHTPLMWLKKYETW 181
            +  + +  G    D +        + +   A       G++S +     +    K +  
Sbjct: 118 SINASLVAYGAHMGDKNYPDCRPAFSKKIEFAFNQGEIDGIKSGIRKRIQIWSPYKAKLS 177

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           K      G D +   +  + +CY   +         C  C +C  R+  ++E   +
Sbjct: 178 KKQLLKKGYDTLGDKIFNTWSCYKNGK-------VQCGKCESCNNRKAVFLEAGIE 226


>gi|145592302|ref|YP_001154304.1| ExsB family protein [Pyrobaculum arsenaticum DSM 13514]
 gi|145284070|gb|ABP51652.1| ExsB family protein [Pyrobaculum arsenaticum DSM 13514]
          Length = 266

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 89/239 (37%), Gaps = 20/239 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP-KWK 68
            A+ + SGG DS+   +  L R   V  +SF YGQ+  +E+E    + +KI ++   K  
Sbjct: 5   RAVAVVSGGPDSTCYTTLWLKRGCDVHAISFLYGQKASIEVERAQALLRKIDQIAAEKGW 64

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL-- 126
             + E  ++ L+ L ++   +   + A+ ++++  P   VP RN++    A   AY +  
Sbjct: 65  GRIVEHKVINLSQLAELWRGTQLTDAAVAVEESYTPTVVVPIRNVVMAAIATAYAYTIRS 124

Query: 127 --GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G    VI     D     D   +      +                   +  E W  +
Sbjct: 125 AAGTKVYVILGSHYDDIRPRDDTWEPRYPDCSPECFEALQAAFRICHFRAERDVEIWTPS 184

Query: 185 QD-IGGQDLVNLILE-------ESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           ++ +    L+            E+ +CY             C +C +C  R   ++E  
Sbjct: 185 REGLRKSQLLRECYREVGDLVYETWSCYKSGEA-------HCGACESCANRHAAFLEAG 236


>gi|329766237|ref|ZP_08257795.1| ExsB family protein [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329137296|gb|EGG41574.1| ExsB family protein [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 224

 Score =  116 bits (290), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 50/243 (20%), Positives = 94/243 (38%), Gaps = 35/243 (14%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGG DS  C+   L     +  +SF YGQ+   E+       KK+        
Sbjct: 2   KKAVIVFSGGIDS-VCMVSHLKSKYDLYGISFSYGQKANREINSAKAFAKKLG------- 53

Query: 69  DSLGEDHILPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             L +  I+ +  + ++   S++  +   KI      +  VP RN +FL  A+  AY L 
Sbjct: 54  --LKQHKIINIGFMKELYGDSNVLTSSKRKIPSAFDYSIVVPIRNAVFLSIASAWAYTLN 111

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETA-------INLGMESHVTVHTPLM-WLKKYE 179
            + +  G    D          T +            IN G+  ++ + +P    + K +
Sbjct: 112 ASLVAYGAHTGDKHYPDCRPIFTKKLESAFNLGEIDGINSGLRKNIQIWSPYREGISKSD 171

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF----K 235
             K+        +++  + ++ +CY           + C  C +C  R+  + +     K
Sbjct: 172 LLKIG-----FKMLDDSIFKTWSCY-------SNKKFHCGVCESCNNRKTAFQKADIIDK 219

Query: 236 EKY 238
            KY
Sbjct: 220 TKY 222


>gi|307261576|ref|ZP_07543244.1| Queuosine biosynthesis protein queC [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306868699|gb|EFN00508.1| Queuosine biosynthesis protein queC [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 193

 Score =  115 bits (288), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 74/202 (36%), Positives = 117/202 (57%), Gaps = 21/202 (10%)

Query: 33  DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTK 92
           + VE ++F YGQR+ +ELE    + K +            +  ++  +++  I+ +++ +
Sbjct: 2   ENVEVVTFQYGQRHAIELEKAAWIAKDLG----------VKQTLIDTSVIKAITSNAMME 51

Query: 93  NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIR 152
              +K Q+ N PNTFV GRN +FL++ A  A   GI  I  GVCETD+SGYPDCR   ++
Sbjct: 52  EREIK-QEGNTPNTFVDGRNALFLLYTAIYAKGQGIQTIFTGVCETDFSGYPDCRDVFVK 110

Query: 153 AIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRY 212
           ++   +NL M+ +  + TPLM+L K +TW LA  +G     + I + +HTCYLG      
Sbjct: 111 SMNVTLNLAMDYNFNIRTPLMYLTKKQTWALADKLGAF---DYIRQHTHTCYLGVEG--- 164

Query: 213 EWGYGCNSCPACYLRQKGWMEF 234
               GC++CP+C LR+KG  E+
Sbjct: 165 ----GCHTCPSCVLREKGLNEY 182


>gi|294338282|emb|CBJ94320.1| hypothetical phage protein [Campylobacter phage CPt10]
          Length = 219

 Score =  115 bits (287), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 66/228 (28%), Positives = 88/228 (38%), Gaps = 21/228 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              +L  SGG DSS  L    DR      +SF YG  ++          KK+VE + K  
Sbjct: 2   KDTVLSISGGLDSSALLFEYKDRIK--IAVSFKYGSNHQDRELAA---AKKVVEEVNKLG 56

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP--NTFVPGRNIIFLVFAATLAYRL 126
             + E  I+ L        S+L        +  +    N  VP RN IFL   A +A   
Sbjct: 57  AEI-EHRIIDLTTAFSTFKSALLSGSKAVPEAGSTEVSNVIVPFRNGIFLSILAGIAESE 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   I I     D + +PDCR+D I A+  AI LG E  V V  P   + K +       
Sbjct: 116 GCRFIAIANHSGDSNVFPDCRYDFIDAMFKAIGLGTEDKVQVFAPYTNITKTDLTIRGMA 175

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            G         + +++CY G           CN CP C  R K   E 
Sbjct: 176 NGLNP------DWTYSCYKGGNKP-------CNVCPTCVDRNKAVQEA 210


>gi|307250348|ref|ZP_07532297.1| Queuosine biosynthesis protein queC [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|307252732|ref|ZP_07534623.1| Queuosine biosynthesis protein queC [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307254994|ref|ZP_07536812.1| Queuosine biosynthesis protein queC [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307257148|ref|ZP_07538920.1| Queuosine biosynthesis protein queC [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306857623|gb|EFM89730.1| Queuosine biosynthesis protein queC [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306859764|gb|EFM91786.1| Queuosine biosynthesis protein queC [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306861867|gb|EFM93843.1| Queuosine biosynthesis protein queC [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306864310|gb|EFM96221.1| Queuosine biosynthesis protein queC [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 193

 Score =  115 bits (287), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 74/202 (36%), Positives = 117/202 (57%), Gaps = 21/202 (10%)

Query: 33  DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTK 92
           + VE ++F YGQR+ +ELE    + K +            +  ++  +++  I+ +++ +
Sbjct: 2   ENVEVVTFQYGQRHAIELEKAAWIAKDLG----------VKQTLIDTSVIKAITSNAMME 51

Query: 93  NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIR 152
              +K Q+ N PNTFV GRN +FL++ A  A   GI  I  GVCETD+SGYPDCR   ++
Sbjct: 52  EREIK-QEGNTPNTFVDGRNALFLLYTAIYAKGQGIRTIFTGVCETDFSGYPDCRDVFVK 110

Query: 153 AIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRY 212
           ++   +NL M+ +  + TPLM+L K +TW LA  +G     + I + +HTCYLG      
Sbjct: 111 SMNVTLNLAMDYNFNIRTPLMYLTKKQTWALADKLGAF---DYIRQHTHTCYLGVEG--- 164

Query: 213 EWGYGCNSCPACYLRQKGWMEF 234
               GC++CP+C LR+KG  E+
Sbjct: 165 ----GCHTCPSCVLREKGLNEY 182


>gi|307248117|ref|ZP_07530145.1| Queuosine biosynthesis protein queC [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306855294|gb|EFM87469.1| Queuosine biosynthesis protein queC [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
          Length = 193

 Score =  115 bits (287), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 74/202 (36%), Positives = 116/202 (57%), Gaps = 21/202 (10%)

Query: 33  DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTK 92
             VE ++F YGQR+ +ELE    + K +            +  ++  +++  I+ +++ +
Sbjct: 2   KNVEVVTFQYGQRHAIELEKAAWIAKDLG----------VKQTLIDTSVIKAITSNAMME 51

Query: 93  NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIR 152
              +K Q+ N PNTFV GRN +FL++ A  A   GI  I  GVCETD+SGYPDCR   ++
Sbjct: 52  EREIK-QEGNTPNTFVDGRNALFLLYTAIYAKGQGIRTIFTGVCETDFSGYPDCRDVFVK 110

Query: 153 AIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRY 212
           ++   +NL M+ +  + TPLM+L K +TW LA  +G     + I + +HTCYLG      
Sbjct: 111 SMNVTLNLAMDYNFNIRTPLMYLTKKQTWALADKLGAF---DYIRQHTHTCYLGVEG--- 164

Query: 213 EWGYGCNSCPACYLRQKGWMEF 234
               GC++CP+C LR+KG  E+
Sbjct: 165 ----GCHTCPSCVLREKGLNEY 182


>gi|126642577|ref|YP_001085561.1| hypothetical protein A1S_2542 [Acinetobacter baumannii ATCC 17978]
          Length = 190

 Score =  115 bits (286), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 55/206 (26%), Positives = 86/206 (41%), Gaps = 29/206 (14%)

Query: 42  YGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN 101
           YGQR+  EL+    + ++                 + LA LG  + +     V  ++Q+ 
Sbjct: 2   YGQRSTTELDAAKALAQRAGVEHRVIN--------IDLANLGGSALTDHNIAVPEQLQEG 53

Query: 102 NLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
                +VP RN IFL +A   A       IVIG+   DYSGYPDCR + I A      L 
Sbjct: 54  IPVT-YVPARNTIFLSYALAAAEVFNAEAIVIGINAVDYSGYPDCRPEFIDAFANMARLA 112

Query: 162 MESHVT-----VHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGY 216
            ++ V        TPL+ L K    +L  + G      +   ++ +CY          G 
Sbjct: 113 TKAGVEGKPLKFETPLLHLSKANIIRLGIEHG------VDYSQTVSCYQAD-----AQGR 161

Query: 217 GCNSCPACYLRQKGWMEFK----EKY 238
            C  C +C LR++G+++       +Y
Sbjct: 162 ACGKCDSCRLRKEGFIDAGVTDPTRY 187


>gi|256831345|ref|YP_003160072.1| ExsB family protein [Jonesia denitrificans DSM 20603]
 gi|256684876|gb|ACV07769.1| ExsB family protein [Jonesia denitrificans DSM 20603]
          Length = 241

 Score =  114 bits (284), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 78/234 (33%), Gaps = 17/234 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K   AL L SGG DS T L   L +   V  L++++G+                +E+ 
Sbjct: 1   MSKNKVAL-LLSGGPDSVTLLYDLLAQGHEVVALTYNFGEAEAQNERDAATAIAAELEVE 59

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             + D  G                ++ ++        +      P  + I L+  A+ A 
Sbjct: 60  HHFFDFSGPLKEFYHLPQPQFLRMAMMRSSEAGPVSKS--EDVQPFGSAIALLLTASWAV 117

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIR-AIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           +  I+++   V   D     + R    + +  T    G +  V  HTP +  +K++    
Sbjct: 118 KNDISSVFYAVHADDSHFTDNHREYFDKLSDVTRECEGQDFAVEFHTPYLDTRKFDVINK 177

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
              +G      +    + +C  G           C  C  C  R   +    E+
Sbjct: 178 GITLG------VPFGRTWSCAAGG-------STHCGQCAPCINRSGAFAVIGEQ 218


>gi|77465652|ref|YP_355155.1| putative ExsB [Rhodobacter sphaeroides 2.4.1]
 gi|77390070|gb|ABA81254.1| putative ExsB [Rhodobacter sphaeroides 2.4.1]
          Length = 207

 Score =  114 bits (284), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/225 (22%), Positives = 83/225 (36%), Gaps = 24/225 (10%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           ALL+ SGG DS+T   W  +R  +   + FDYGQ + VE E           L      S
Sbjct: 4   ALLMASGGLDSTTVAYWLTERGVQFIPVFFDYGQ-HCVETEWE--------TLKEVLPAS 54

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                   ++ L   S S L     +  ++    + +VP R ++F   AA  A  LG   
Sbjct: 55  AAHPERNDISDLFRGSKSRLITEADLWNEEVKDEDLYVPYRTLLFYSAAAARAQTLGAFE 114

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +  G   ++ +   DC  + +  ++          V   +P  +  K E  K +  +G  
Sbjct: 115 VYTGFINSNRAKEIDCTAEFMNKLDAL--TDSVGPVRFLSPFRFWSKSEVAKESIRLG-- 170

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
               + +  + +C       +      C +CP C  R     E  
Sbjct: 171 ----VPIGRTFSC-------QAASLMPCGACPNCVERLAALRETG 204


>gi|294338085|emb|CBJ93923.1| hypothetical phage protein [Campylobacter phage CP220]
          Length = 219

 Score =  113 bits (283), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 66/228 (28%), Positives = 89/228 (39%), Gaps = 21/228 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              +L  SGG DSS  L    DR      +SF YG  ++ +        KK+VE + K  
Sbjct: 2   KDTVLSLSGGLDSSALLFEYKDRIK--IAVSFKYGSNHQDKELAA---AKKVVEEVNKLG 56

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP--NTFVPGRNIIFLVFAATLAYRL 126
             + E  I+ L        S+L        +  +    N  VP RN IFL   A +A   
Sbjct: 57  AEI-EHRIIDLTTAFSTFKSALLSGSKAVPEAGSTEVSNVIVPFRNGIFLSILAGIAESE 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   I I     D + +PDCR+D I A+  AI LG E  V V  P   + K +       
Sbjct: 116 GCRFIAIANHSGDSNVFPDCRYDFIDAMFKAIGLGTEDKVQVFAPYTNITKTDLTIRGMT 175

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            G         + +++CY G           CN CP C  R K   E 
Sbjct: 176 NGLNP------DWAYSCYKGGNKP-------CNVCPTCVDRNKAVQEA 210


>gi|258646635|ref|ZP_05734104.1| ExsB protein [Dialister invisus DSM 15470]
 gi|260404056|gb|EEW97603.1| ExsB protein [Dialister invisus DSM 15470]
          Length = 233

 Score =  113 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 91/238 (38%), Gaps = 23/238 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             A++L SGG DS+TCLS A++    + V T S  YGQ++K EL+    V      +   
Sbjct: 2   KKAIILSSGGVDSTTCLSVAVNALGAENVSTASIFYGQKHKKELDAARAVAAYY-HVPHY 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN--NLPNTFVPGRNIIFLVFAATLA- 123
             D          ++L   + S + K+   +I +      +T+VP RN + +  AA+LA 
Sbjct: 61  EFDLAQIMQYSNCSLLSHSTESIVHKSYGEQIAEKGAGKVSTYVPFRNGLMISVAASLAA 120

Query: 124 ----YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
                      +     +     Y DC    ++A+  A+ +G    V +  P     K  
Sbjct: 121 GIYEEEETDIYVGAHGDDAAGEAYADCSPQFLKAMGEAVAVGTYGKVHLVFPFADKNKTG 180

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                  +G         E + +CY G           C  C  C  R K + E   +
Sbjct: 181 VVAEGLKLGT------PYELTWSCYEGGDTP-------CGECGTCIDRAKAFAENGVE 225


>gi|126737389|ref|ZP_01753124.1| ExsB [Roseobacter sp. SK209-2-6]
 gi|126721974|gb|EBA18677.1| ExsB [Roseobacter sp. SK209-2-6]
          Length = 215

 Score =  113 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/224 (20%), Positives = 78/224 (34%), Gaps = 33/224 (14%)

Query: 27  WALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILG--- 83
              +       +SFDYGQR++ EL+      +++               I+ +  +G   
Sbjct: 1   MVAEEHQLTRLVSFDYGQRHRKELDYAAAAAERLG----------VPHDIIDMRSIGASL 50

Query: 84  -DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSG 142
              + +          ++ ++  T VP RN I L  A  +A   G   +   V   D+  
Sbjct: 51  TGSALTDDIDVPDGHYEEESMKVTVVPNRNAIMLTIAYGIAAANGDEAVATAVHGGDHFI 110

Query: 143 YPDCRHDTIRAI--ETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEES 200
           YPDCR +   A        L   + V ++TP +   K +              N    E+
Sbjct: 111 YPDCRPEFTEAFDAMQRAALDGYADVQLYTPFVHRSKADIVTAGAKH------NTPFAET 164

Query: 201 HTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM----EFKEKYQD 240
            +CY G           C  C  C  R++ +     E    Y+D
Sbjct: 165 WSCYKGGEH-------QCGRCGTCVERREAFHLAGVEDPTTYED 201


>gi|221200023|ref|ZP_03573066.1| ExsB [Burkholderia multivorans CGD2M]
 gi|221206823|ref|ZP_03579835.1| ExsB [Burkholderia multivorans CGD2]
 gi|221173478|gb|EEE05913.1| ExsB [Burkholderia multivorans CGD2]
 gi|221180262|gb|EEE12666.1| ExsB [Burkholderia multivorans CGD2M]
          Length = 206

 Score =  113 bits (281), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 48/227 (21%), Positives = 88/227 (38%), Gaps = 24/227 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             ALLL SGG DS+T           V  + FDYGQ + VE+E           +     
Sbjct: 2   KRALLLASGGLDSTTVGYQLATTGVEVVPIFFDYGQ-HCVEIEWSR--------VNEVLP 52

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             +     L ++ +   S S L +   +  ++    + ++P R ++F   AA  A  +GI
Sbjct: 53  ADMQRPERLVISDIFRGSQSRLIREADLWTEEVQDDDLYIPYRTMLFFAAAAARAQTVGI 112

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
            ++  G   ++++   DC    +              V  H+P  +  K +  + A ++G
Sbjct: 113 LDVYTGFINSNHAKEIDCTAAFMN--NLDGLTSSIGPVRFHSPFRYSSKADVARAAAELG 170

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
                 + +  +++C       +    + C +CP C  R     E K
Sbjct: 171 ------VPIGRTYSC-------QASAQFPCGACPNCVERLNALKEAK 204


>gi|167584746|ref|ZP_02377134.1| putative ExsB [Burkholderia ubonensis Bu]
          Length = 206

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 46/227 (20%), Positives = 89/227 (39%), Gaps = 24/227 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             ALLL SGG DS+T           V  + FDYGQ + V++E           +     
Sbjct: 2   KRALLLASGGLDSTTVGYQLAATGVEVVPIFFDYGQ-HCVDVEWSR--------VNEVLP 52

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             +       ++ +   S S L +   +  ++    + ++P R ++F   AA  A  +GI
Sbjct: 53  AGMRRPERFDVSDIFRGSQSRLIREADLWTEEVKDDDLYIPYRTMLFFAAAAARAQTVGI 112

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
            ++  G   ++++   DC    + +++          V  H+P  +  K +  + A + G
Sbjct: 113 LDVYTGFINSNHAKEIDCTAAFMNSLDGL--TSSIGPVRFHSPFRYSSKVDVVRAAAEFG 170

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
                 + +  +++C       +    + C +CP C  R     E K
Sbjct: 171 ------VPIGRTYSC-------QVSAQFPCGACPNCVERLNALKEAK 204


>gi|213692725|ref|YP_002323311.1| ExsB family protein [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|213524186|gb|ACJ52933.1| ExsB family protein [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 251

 Score =  112 bits (280), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 80/237 (33%), Gaps = 19/237 (8%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +I+      LL SGG DS+T L   L++   +  ++F++G   + E        ++IV  
Sbjct: 1   MIQNHNRVALLLSGGPDSTTLLYDLLNQGKEIYAVTFNFG---ETEGCNESQHAQRIVTN 57

Query: 64  MP--KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +   +      +                L K     +   N      P  + I L+  A+
Sbjct: 58  LHSERLHHYQYDFSEQFKRFYELPQPQFLRKAFGPFVVAPNKEEHVQPFGSAIALMLMAS 117

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI-NLGMESHVTVHTPLMWLKKYET 180
            A +  I ++   V   D   + +            +   G E  VT HTP + + K   
Sbjct: 118 WALKHDIVDVYYAVHSNDAVFHDNHASYFEALHTVTVECEGDEYGVTFHTPYLSINKCAV 177

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            +    +G      +   ++ +C LG           C  C  C  R+  +     K
Sbjct: 178 IQKGMGLG------VPFGDTWSCALGG-------TVHCGVCDPCRDRRTSFEILGIK 221


>gi|289808109|ref|ZP_06538738.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 160

 Score =  112 bits (279), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 65/167 (38%), Positives = 103/167 (61%), Gaps = 13/167 (7%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL+ A  ++D V  ++FDYGQR++ E++    +  K+        
Sbjct: 2   KRAVVVFSGGQDSTTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARALALKLGARA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  +L + +L +++ SSLT++       +   + +PNTFVPGRNI+FL  AA  AY
Sbjct: 58  -----HKVLDVTLLNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAY 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
           ++    ++ GVCETD+SGYPDCR + ++A+  A+NLGM   +   TP
Sbjct: 113 QVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVNLGMAKDIRFETP 159


>gi|134299609|ref|YP_001113105.1| exsB protein [Desulfotomaculum reducens MI-1]
 gi|172044293|sp|A4J5C7|QUEC_DESRM RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|134052309|gb|ABO50280.1| exsB protein [Desulfotomaculum reducens MI-1]
          Length = 228

 Score =  112 bits (279), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 84/239 (35%), Gaps = 34/239 (14%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           +++L SGG DS+  L++A    +    L+ +Y QR   +         +           
Sbjct: 3   SVVLLSGGLDSAVNLAFARTEGNVKLALTINYRQRAAHKEIAAAAQLARY---------Y 53

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQ------------DNNLPNTFVPGRNIIFLVF 118
                ++ L  L +I+ ++L ++ +   +                   +VP RN +F+  
Sbjct: 54  AIPHRVIELPWLAEITKTALVRSESQLPEPKTEELDQLELAGKTAAEVWVPNRNGLFVNI 113

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
           AA  A  L    +V G    + + +PD   +   A   A+     + V V +    L K 
Sbjct: 114 AACFAETLHCEIVVAGFNCEEAATFPDNTPEFALAASAAMQYSTANQVKVLSYTGRLNKK 173

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +   L Q +       L  E   +CY G+          C  C +C    + +      
Sbjct: 174 DIVALGQRL------QLPWELIWSCYRGEALM-------CGKCESCQRMIRAFHSLGLN 219


>gi|297621549|ref|YP_003709686.1| Queuosine biosynthesis protein QueC [Waddlia chondrophila WSU
           86-1044]
 gi|297376850|gb|ADI38680.1| Queuosine biosynthesis protein QueC [Waddlia chondrophila WSU
           86-1044]
          Length = 228

 Score =  111 bits (278), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 75/234 (32%), Positives = 116/234 (49%), Gaps = 25/234 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             AL++ SGG DSS CL  A+DR   D+V ++SF YGQR+  EL     + +        
Sbjct: 4   KQALVVHSGGMDSSLCLKLAIDRHGADQVLSISFRYGQRHSNELVQAAKICR-------- 55

Query: 67  WKDSLGEDHILPLAILGDISHSS-LTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             D   +  ++ L  L +I+ ++ +   +A++      PNT V GRN +    AA  A  
Sbjct: 56  --DWGVDHCVIQLDCLQEITDNALMNTEIAIEHSQGRPPNTLVLGRNGLMARLAAIHANH 113

Query: 126 LGITNIVIGVCETDY--SGYPDCRHDTIRAIETAINLG-MESHVTVHTPLMWLKKYETWK 182
           LG   I +GV E +   SGY DC  D +  +E  + +        + TP++ + K +T  
Sbjct: 114 LGAEKIYMGVIEVEGANSGYRDCSRDYMDLMEKILRIDLDNPRFEIVTPIVQMTKCQTMA 173

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           LA  +G   +++ +L+E+ TCY G        G GC  CPAC LR +G   +K 
Sbjct: 174 LADQLG---VLDYLLKETITCYEGI------GGRGCQHCPACKLRNEGADRYKR 218


>gi|169831397|ref|YP_001717379.1| exsB protein [Candidatus Desulforudis audaxviator MP104C]
 gi|254764331|sp|B1I3W2|QUEC_DESAP RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|169638241|gb|ACA59747.1| exsB protein [Candidatus Desulforudis audaxviator MP104C]
          Length = 220

 Score =  111 bits (276), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/237 (20%), Positives = 81/237 (34%), Gaps = 33/237 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS+ CL++ +   +    L+ DYGQ                         
Sbjct: 2   KGIVLLSGGLDSAVCLAFGVRSLEVALCLTADYGQLAAGREI---------AAAAALSAH 52

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNL-----------PNTFVPGRNIIFLVF 118
                 ++ L  L +I  S+LT  + +   +                 +VP RN + +  
Sbjct: 53  YGIRHQVVELPFLREIDCSALTGRLGLPEPEEMELDDPVRSAETARQVWVPNRNGLLVNV 112

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
           AA  A  LG   I+ G    +   +PD     + A+  ++     S + V +    L K 
Sbjct: 113 AACYAEALGCERIIAGFNREEAQHFPDNSPQFLDAVNHSLAYSTLSGIRVISYTQQLDKA 172

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           E   L Q +G      L      +CY G  +        C  C +C   ++      
Sbjct: 173 EIVALGQRLG------LPWSLVWSCYRGGDE-------ACGVCESCRRLERAKRSAG 216


>gi|254246871|ref|ZP_04940192.1| hypothetical protein BCPG_01642 [Burkholderia cenocepacia PC184]
 gi|124871647|gb|EAY63363.1| hypothetical protein BCPG_01642 [Burkholderia cenocepacia PC184]
          Length = 156

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 75/145 (51%), Positives = 113/145 (77%)

Query: 90  LTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHD 149
           +T+ + ++   N LPNTFVPGRN++F+  AA +AYR G+  +V G+CETD+SGYPDCR D
Sbjct: 1   MTRMIEIETTANGLPNTFVPGRNLMFMTIAAAIAYRRGLRVLVGGMCETDFSGYPDCRDD 60

Query: 150 TIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRD 209
           T++A++ A+NLGM++ + + TPLMWL K +TW+LA+ +GG+ LV LI  E+HTCY+G+R 
Sbjct: 61  TMKALQVALNLGMDTRMVLETPLMWLDKAQTWQLAEQLGGEALVELIRVETHTCYVGERA 120

Query: 210 KRYEWGYGCNSCPACYLRQKGWMEF 234
           + ++WG+GC  CPAC LR++G+  +
Sbjct: 121 ELHDWGFGCGECPACKLRKRGYEAY 145


>gi|269964053|ref|ZP_06178358.1| ExsB protein [Vibrio harveyi 1DA3]
 gi|269831194|gb|EEZ85348.1| ExsB protein [Vibrio harveyi 1DA3]
          Length = 159

 Score =  109 bits (271), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 65/144 (45%), Positives = 90/144 (62%), Gaps = 6/144 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  FD V  ++FDYGQR+K+E+E    V K +     K  
Sbjct: 2   KKAVVVFSGGQDSTTCLVQALKEFDEVHAITFDYGQRHKLEIEVAEKVAKDLSVAAHKVM 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D      +  L  L   S +     V+ ++Q+N LPN+FVPGRNI+FL  A   AY++G 
Sbjct: 62  D------VGLLNELAISSLTRDDIPVSHELQENGLPNSFVPGRNILFLTLAGIYAYQIGA 115

Query: 129 TNIVIGVCETDYSGYPDCRHDTIR 152
             ++ GVCETD+SGYPDCR D ++
Sbjct: 116 ETVITGVCETDFSGYPDCRDDFVK 139


>gi|254489139|ref|ZP_05102343.1| exsB protein [Roseobacter sp. GAI101]
 gi|214042147|gb|EEB82786.1| exsB protein [Roseobacter sp. GAI101]
          Length = 215

 Score =  108 bits (270), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 45/224 (20%), Positives = 78/224 (34%), Gaps = 33/224 (14%)

Query: 27  WALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILG--- 83
                 +    +SFDYGQR++ EL+       ++               I+ L  +G   
Sbjct: 1   MVAQEHELTRLVSFDYGQRHRKELDYAALCAARLE----------VPHDIIDLRAIGAAL 50

Query: 84  -DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSG 142
              + +           + ++  T VP RN I L  A  +A   G   +   V   D+  
Sbjct: 51  TGSALTDDIDVPDGHYAEESMRITVVPNRNAIMLTVAFGVAAARGDQAVATAVHGGDHFI 110

Query: 143 YPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEES 200
           YPDCR    +A E      L   + V+++TP +   K +              +    ++
Sbjct: 111 YPDCRPAFTQAFEAMQKAALEGYADVSLYTPFVNRTKADIVTEGARC------DTPFAQT 164

Query: 201 HTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQD 240
            +CY G         + C  C  C  R++ +          Y+D
Sbjct: 165 WSCYKGG-------THHCGRCGTCVERREAFHLAGVTDPTTYED 201


>gi|315427301|dbj|BAJ48912.1| transcription regulator ExsB related protein [Candidatus
           Caldiarchaeum subterraneum]
 gi|315428195|dbj|BAJ49779.1| transcription regulator ExsB related protein [Candidatus
           Caldiarchaeum subterraneum]
          Length = 216

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 82/227 (36%), Gaps = 23/227 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L SGG DS+  L         +  L+    +RN  E+E    + K           
Sbjct: 2   KIVALVSGGIDSTVMLWKLRSEGHSILPLTLLTFRRNPREIEAAKKISK---------AA 52

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           S  E  +  ++ L ++          +  Q  +LPN  +P RNIIF   AA +A      
Sbjct: 53  SGREPIVYDVSFLRELYDYPQHIKERVFQQFPSLPNIVIPYRNIIFYSVAAYVACHEAAE 112

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLG-MESHVTVHTPLMWLKKYETWKLAQDIG 188
            I  G    D    PD   +    +E  +N       V + TP+  L K E  +L  ++G
Sbjct: 113 AIAGGHTREDMERIPDVGEEFFADLEKILNKSTPFHRVKILTPVAGLWKPEIMRLGVELG 172

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
                   + E+ +C          +   C  CP C  R++ +    
Sbjct: 173 A------PIGETWSC-------WSVFEKHCGKCPGCLSRKEVFRAVG 206


>gi|304317216|ref|YP_003852361.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thermoanaerobacterium thermosaccharolyticum DSM 571]
 gi|302778718|gb|ADL69277.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thermoanaerobacterium thermosaccharolyticum DSM 571]
          Length = 383

 Score =  106 bits (263), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 68/192 (35%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A++L SGG DS       + R   +E + F            +   + K+++L  K 
Sbjct: 171 NGRAVVLLSGGIDSPVAAWMMMKRGVEIEAVYFH------SPPYTQERAKDKVIDLCKKL 224

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +   + ++  +             +  + I D   P         + +  A  +A + G
Sbjct: 225 SEYGQDIYLHVVNF----------TDFQLAIYDKCPPKMTTIIMRRMMMRVAENIANKYG 274

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +          + IE+       +H+ V  PL+ + K E  ++++ I
Sbjct: 275 AKALITGESLGQVAS---------QTIESLYCTNEVTHMPVFRPLIGMDKSEIVEISKKI 325

Query: 188 GGQDLVNLILEE 199
           G  D+     E+
Sbjct: 326 GTYDISIRPYED 337


>gi|323706134|ref|ZP_08117703.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323534578|gb|EGB24360.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 381

 Score =  106 bits (263), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 67/192 (34%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A++L SGG DS       + R  ++E + F            +   + K+++L  K 
Sbjct: 171 NGKAVVLLSGGIDSPVAAWMMMKRGVKIEAVYFH------SPPYTQERAKDKVIDLCKKL 224

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +   + ++  +             +  + I D   P         + +  A  +A + G
Sbjct: 225 SEYGQDVYLHVVNF----------TDFQLAIYDKCPPKLTTIIMRRMMMRVAENIALKYG 274

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +           A+         +H+ V  PL+ + K E  ++++ I
Sbjct: 275 AKALITGESLGQVASQTIESLYCTNAV---------THMPVFRPLIGMDKSEIVEISKKI 325

Query: 188 GGQDLVNLILEE 199
           G  D+     E+
Sbjct: 326 GTYDISIRPYED 337


>gi|256045475|ref|ZP_05448360.1| exsB protein [Brucella melitensis bv. 1 str. Rev.1]
          Length = 217

 Score =  105 bits (262), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 72/223 (32%), Gaps = 25/223 (11%)

Query: 24  CLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILG 83
                    +    LSFDYGQR+K EL+      K++                   A L 
Sbjct: 1   LAHKMAAEHELTGLLSFDYGQRHKKELDFAQACAKRLGVPHQIIDIRTIG------ASLT 54

Query: 84  DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGY 143
             + +           +  +  T VP RN I L  A  +A       + + V   D+  Y
Sbjct: 55  GSALTDDVDVPDGHYAEETMKVTVVPNRNAIMLAIAFGVAAAQKADAVALAVHGGDHFIY 114

Query: 144 PDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESH 201
           PDCR   I A +      L   + V +  P +   K +                  E + 
Sbjct: 115 PDCRPGFIEAFQTMQKHALDGYADVKLLAPYVHATKADIVADGAKY------RTPFEATW 168

Query: 202 TCYLGKRDKRYEWGYGCNSCPACYLRQKGW----MEFKEKYQD 240
           +CY G           C  C  C  R++ +    ++    Y+D
Sbjct: 169 SCYKGAD-------RHCGRCGTCVERREAFHLAGIDDPTSYED 204


>gi|16273113|ref|NP_439347.1| hypothetical protein HI1191 [Haemophilus influenzae Rd KW20]
 gi|1574118|gb|AAC22844.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
          Length = 196

 Score =  105 bits (261), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 70/181 (38%), Positives = 115/181 (63%), Gaps = 14/181 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            A+++FSGGQDS+TCL  A+  +  + +E ++F YGQR+ +ELE    + + +       
Sbjct: 11  KAIVIFSGGQDSTTCLFQAIAEYGKENIEAITFQYGQRHAIELEKARTIAQDLG------ 64

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                +  ++  +++  I+H++L    A ++ ++N LPNTFV GRN +FL++AA  A   
Sbjct: 65  ----IKQTLIDTSVMKAITHNALMDEQAHIEQKENELPNTFVDGRNALFLLYAAIYAKGQ 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV-HTPLMWLKKYETWKLAQ 185
           GI +I+ GVCETD+SGYPDCR   I+++   +NL M+  + +  TPLM+L K +TW+LA 
Sbjct: 121 GIQDIITGVCETDFSGYPDCRDVFIKSMNVTLNLAMDYPIPISKTPLMYLTKAQTWQLAD 180

Query: 186 D 186
           +
Sbjct: 181 E 181


>gi|147677737|ref|YP_001211952.1| PP-loop superfamily ATPase [Pelotomaculum thermopropionicum SI]
 gi|189038932|sp|A5D2E1|QUEC_PELTS RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
           Full=7-cyano-7-carbaguanine synthase; AltName:
           Full=PreQ(0) synthase; AltName: Full=Queuosine
           biosynthesis protein queC
 gi|146273834|dbj|BAF59583.1| predicted PP-loop superfamily ATPase [Pelotomaculum
           thermopropionicum SI]
          Length = 221

 Score =  104 bits (260), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 84/240 (35%), Gaps = 34/240 (14%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +++L SGG DS+  L+ +L   +    L+FDYGQ+     +                  
Sbjct: 2   RSIVLLSGGLDSAVSLACSLQGGEVCLCLTFDYGQKAAEREK---------KAAAALAAH 52

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT------------FVPGRNIIFLV 117
                 ++ L  L +I+ ++L    +                       +VP RN +F+ 
Sbjct: 53  YKLRHRVIELPFLKEITSTALVSETSELPAAEEEELDENEASRSSAALVWVPNRNGVFIN 112

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
            AA  A       +V G    + + +PD   + + A   +++    + V V +    L K
Sbjct: 113 IAAAFAEAYRCDLVVTGFNREEAASFPDNSPEFVVAANASLSYSTLNKVRVASYTQGLNK 172

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
            E  KL  ++G      +  +   +CY G           C  C +C    +       +
Sbjct: 173 TEIVKLGMNMG------VPFDLIWSCYGGAEKM-------CRRCESCLRFIRAAKTAGLQ 219


>gi|303239948|ref|ZP_07326470.1| thiamine biosynthesis/tRNA modification protein ThiI [Acetivibrio
           cellulolyticus CD2]
 gi|302592427|gb|EFL62153.1| thiamine biosynthesis/tRNA modification protein ThiI [Acetivibrio
           cellulolyticus CD2]
          Length = 392

 Score =  104 bits (258), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 61/192 (31%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R   +E + F                ++K++EL    
Sbjct: 179 NGKAVLLLSGGIDSPVAGWMIAKRGVELEAVHFY------SYPYTSERAKEKVIELTKIL 232

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                   +  +             ++ ++I +    +        + +  A  +A ++G
Sbjct: 233 TLYCNNIKLHIVPF----------TDIQLEINEKCPQDQLTIIMRRVMMTIAERIAEKVG 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +           ++           + V  PL+ + K E   +A+ I
Sbjct: 283 ALALVTGESVGQVASQTIQSLYVTNSV---------VKMPVFRPLIGMDKNEVIDIARKI 333

Query: 188 GGQDLVNLILEE 199
           G  +   L  E+
Sbjct: 334 GTFETSILPYED 345


>gi|326390537|ref|ZP_08212093.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thermoanaerobacter ethanolicus JW 200]
 gi|325993362|gb|EGD51798.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thermoanaerobacter ethanolicus JW 200]
          Length = 380

 Score =  103 bits (257), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A +L SGG DS       + R   VE + F                + K+V+L    
Sbjct: 172 NGKATVLLSGGIDSPVAAWMMMKRGVEVEAVYFH------SPPYTSERAKDKVVDLCEVL 225

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                +  +  +             ++ ++I +   P         + +  A  +A + G
Sbjct: 226 SQYGQKIKLHVVHF----------TDLQLEIYEKCPPRFTTIIMRRMMMKIAEKIAQKNG 275

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +           A            + +  PL+ + K E   LAQ I
Sbjct: 276 SMALITGESLGQVASQTIESLYVTNAS---------VSMPIFRPLIGMDKTEIIDLAQKI 326

Query: 188 GGQDLVNLILEE 199
           G  ++     E+
Sbjct: 327 GTFEISIRPYED 338


>gi|307266518|ref|ZP_07548051.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918437|gb|EFN48678.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 380

 Score =  103 bits (257), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A +L SGG DS       + R   VE + F                + K+V+L    
Sbjct: 172 NGKATVLLSGGIDSPVAAWMMMKRGVEVEAVYFH------SPPYTSERAKDKVVDLCEVL 225

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                +  +  +             ++ ++I +   P         + +  A  +A + G
Sbjct: 226 SQYGQKIKLHVVHF----------TDLQLEIYEKCPPRFTTIIMRRMMMKIAEKIAQKNG 275

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +           A            + +  PL+ + K E   LAQ I
Sbjct: 276 SMALITGESLGQVASQTIESLYVTNAS---------VSMPIFRPLIGMDKTEIIDLAQKI 326

Query: 188 GGQDLVNLILEE 199
           G  ++     E+
Sbjct: 327 GTFEISIRPYED 338


>gi|265991899|ref|ZP_06104456.1| queuosine biosynthesis protein queC [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263002921|gb|EEZ15258.1| queuosine biosynthesis protein queC [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 213

 Score =  103 bits (257), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/219 (21%), Positives = 72/219 (32%), Gaps = 25/219 (11%)

Query: 28  ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISH 87
                +    LSFDYGQR+K EL+      K++                   A L   + 
Sbjct: 1   MAAEHELTGLLSFDYGQRHKKELDFAQACAKRLGVPHQIIDIRTIG------ASLTGSAL 54

Query: 88  SSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCR 147
           +           +  +  T VP RN I L  A  +A       + + V   D+  YPDCR
Sbjct: 55  TDDVDVPDGHYAEETMKVTVVPNRNAIMLAIAFGVAAAQKADAVALAVHGGDHFIYPDCR 114

Query: 148 HDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYL 205
              I A +      L   + V +  P +   K +                  E + +CY 
Sbjct: 115 PGFIEAFQTMQKHALDGYADVKLLAPYVHATKADIVADGAKY------RTPFEATWSCYK 168

Query: 206 GKRDKRYEWGYGCNSCPACYLRQKGW----MEFKEKYQD 240
           G           C  C  C  R++ +    ++    Y+D
Sbjct: 169 GAD-------RHCGRCGTCVERREAFHLAGIDDPTSYED 200


>gi|315425945|dbj|BAJ47595.1| transcription regulator ExsB related protein [Candidatus
           Caldiarchaeum subterraneum]
          Length = 213

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 51/225 (22%), Positives = 82/225 (36%), Gaps = 23/225 (10%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           + L SGG DS+  L         +  L+    +RN  E+E    + K           S 
Sbjct: 1   MALVSGGIDSTVMLWKLRSEGHSIVPLTLLTFRRNPREIEAAKKISK---------AASG 51

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
            E  +  ++ L ++          +  Q  +LPN  +P RNIIF   AA +A       I
Sbjct: 52  CEPIVYDVSFLRELYDYPQHIKERVFQQFPSLPNIVIPYRNIIFYSVAAYVACHEAAEAI 111

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLG-MESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
             G    D    PD   +    +E  +N       V + TP+  L K E  +L  ++G  
Sbjct: 112 AGGHTREDMERIPDVGEEFFADLEKILNKSTPFHRVKILTPVAGLWKPEIMRLGVELGA- 170

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
                 + E+ +C          +   C  CP C  R++ +    
Sbjct: 171 -----PIGETWSC-------WSVFEKHCGKCPGCLSRKEVFRAVG 203


>gi|220929105|ref|YP_002506014.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           cellulolyticum H10]
 gi|219999433|gb|ACL76034.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           cellulolyticum H10]
          Length = 392

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 64/206 (31%), Gaps = 33/206 (16%)

Query: 2   NDIIK--------KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR 53
           ++++K            A+LL SGG DS         R   +E + F             
Sbjct: 166 SEMMKAQGGMPLGSNGKAMLLLSGGIDSPVAGWMMGKRGVEIEAVHFF------SYPYTS 219

Query: 54  LCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
              ++K+++L        G+  +  +              + +KI DN            
Sbjct: 220 ERAKQKVIDLAQIMAQYCGKIRLHVVPF----------TEIQLKINDNCPEEQLTIIMRR 269

Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
           I +  A  +A ++    ++ G      +           A            + V  PL+
Sbjct: 270 IMMKIAEQIAVKVNAMALITGESMGQVASQTMQSLYCTDAAVN---------MPVFRPLI 320

Query: 174 WLKKYETWKLAQDIGGQDLVNLILEE 199
            + K E   +A+ I   D   L  E+
Sbjct: 321 GMDKVEVVDIARRIDTFDTSVLPYED 346


>gi|167464972|ref|ZP_02330061.1| Thiamine biosynthesis [Paenibacillus larvae subsp. larvae
           BRL-230010]
 gi|322383691|ref|ZP_08057442.1| ThiI-like protein [Paenibacillus larvae subsp. larvae B-3650]
 gi|321151903|gb|EFX44846.1| ThiI-like protein [Paenibacillus larvae subsp. larvae B-3650]
          Length = 402

 Score =  102 bits (254), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 61/193 (31%), Gaps = 25/193 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +   +LL SGG DS      A+ R   +E + F                ++K++EL   
Sbjct: 178 MSGKGMLLLSGGIDSPVAGWMAMRRGLEIEAVHFH------SYPYTSERAKQKVIELARI 231

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G   +  +              +  +I      N  +          A  LA + 
Sbjct: 232 LSRYGGIIKLHLVPF----------TEIQTRIHQEYRENLLITIYRRCMYRIAEKLAEKR 281

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +V G      +       +          +G    + +  PL+ L K E  K+AQ+
Sbjct: 282 KALALVTGESLGQVASQTLTSMN---------VIGRVVEMPIIQPLVTLDKKEIVKVAQE 332

Query: 187 IGGQDLVNLILEE 199
           IG  +   L  E+
Sbjct: 333 IGTFETSILPYED 345


>gi|259416599|ref|ZP_05740519.1| ExsB [Silicibacter sp. TrichCH4B]
 gi|259348038|gb|EEW59815.1| ExsB [Silicibacter sp. TrichCH4B]
          Length = 207

 Score =  102 bits (253), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 45/227 (19%), Positives = 82/227 (36%), Gaps = 24/227 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              LLL SGG DS+T     L++    + + FDYGQ + VE E           L+    
Sbjct: 2   KRVLLLASGGLDSTTVAYQLLEKGCLPKPIFFDYGQ-HCVETEW--------GRLLEVMP 52

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   + ++ +   S S L     +  +  +  + +VP R + F   AA  A  +GI
Sbjct: 53  ARAEYPERIDISGVFAGSKSRLLNEADLWSESISDDDLYVPYRTLFFFSAAAARAQSIGI 112

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
           + +  G   ++++   DC  D +  ++          V   +P     K +    A  + 
Sbjct: 113 SEVYTGFINSNHAKEIDCSADFLNGLDAL--TENVGPVRFFSPFRHSSKADVALEALRL- 169

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
                ++ +  + +C       +      C +CP C  R        
Sbjct: 170 -----DVPIGRTFSC-------QAASKLPCGACPNCVERLAALRATG 204


>gi|297544908|ref|YP_003677210.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thermoanaerobacter mathranii subsp. mathranii str. A3]
 gi|296842683|gb|ADH61199.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thermoanaerobacter mathranii subsp. mathranii str. A3]
          Length = 380

 Score =  101 bits (252), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A +L SGG DS       + R   +E + F                + K+V+L    
Sbjct: 172 NGKATVLLSGGIDSPVATWMMMKRGVEIEAVYFH------SPPYTSERAKDKVVDLCKVL 225

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                +  +  +             ++ ++I +   P         + +  A  +A + G
Sbjct: 226 SQYGQKIKLHVVHF----------TDLQLEIYEKCPPKFTTIIMRRMMMKIAEKIAQQNG 275

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +           A            + +  PL+ + K E   LAQ I
Sbjct: 276 SMALVTGESLGQVASQTIESLYVTNAS---------VSIPIFRPLIGMDKTEIINLAQKI 326

Query: 188 GGQDLVNLILEE 199
           G  ++     E+
Sbjct: 327 GTFEISIRPYED 338


>gi|91976078|ref|YP_568737.1| ExsB [Rhodopseudomonas palustris BisB5]
 gi|91682534|gb|ABE38836.1| ExsB [Rhodopseudomonas palustris BisB5]
          Length = 206

 Score =  101 bits (252), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 47/227 (20%), Positives = 93/227 (40%), Gaps = 22/227 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           SALLL SGG DS+T   W +++    + L FDYGQ + VE E      + + E++P    
Sbjct: 2   SALLLCSGGLDSTTVGYWLVEKNISFQPLFFDYGQ-HCVEKEW-----ETLQEVLP-ISG 54

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +     + ++ +   S S L     +  +     + ++P R ++F    A +A   G+ 
Sbjct: 55  LVSPLLRINISEIFQHSPSRLIAEPNLWTEHVEDDDLYIPYRTLMFFSVGACIAQTRGLD 114

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +  G   ++++   DC    +  +++         V    P     K +  + A ++  
Sbjct: 115 AVYAGFINSNHAKELDCSAAFLNNLDSLSR--SLGPVRFELPFRDWSKADVVRRANEL-- 170

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
                + + ++++C       +      C +CP C  R      F+E
Sbjct: 171 ----RVPVGKTYSC-------QLFSDTPCGACPNCVERISAIESFRE 206


>gi|289578688|ref|YP_003477315.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thermoanaerobacter italicus Ab9]
 gi|289528401|gb|ADD02753.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thermoanaerobacter italicus Ab9]
          Length = 380

 Score =  101 bits (251), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A +L SGG DS       + R   +E + F                + K+V+L    
Sbjct: 172 NGKATVLLSGGIDSPVATWMMMKRGVEIEAVYFH------SPPYTSERAKDKVVDLCKVL 225

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                +  +  +             ++ ++I +   P         + +  A  +A + G
Sbjct: 226 SQYGQKIKLHVVHF----------TDLQLEIYEKCPPKFTTIIMRRMMMKIAEKIAQQNG 275

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +           A            + +  PL+ + K E   LAQ I
Sbjct: 276 SMALITGESLGQVASQTIESLYVTNAS---------VSIPIFRPLIGMDKTEIIDLAQKI 326

Query: 188 GGQDLVNLILEE 199
           G  ++     E+
Sbjct: 327 GTFEISIRPYED 338


>gi|326202178|ref|ZP_08192048.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           papyrosolvens DSM 2782]
 gi|325987973|gb|EGD48799.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           papyrosolvens DSM 2782]
          Length = 391

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              ALLL SGG DS         R   +E + F                ++K+++L    
Sbjct: 179 NGKALLLLSGGIDSPVAGWMMGKRGVEIEAIHFY------SYPYTSERAKQKVIDLAQIM 232

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  +              + +KI DN            I +  A  +A ++ 
Sbjct: 233 AQYCGKIRLHVVPF----------TEIQLKINDNCPEEQLTIIMRRIMMQIAEKVAAKVN 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +           A            + V  PL+ + K E   +A+ I
Sbjct: 283 AMALITGESMGQVASQTMQSLYCTDAAVN---------MPVFRPLIGMDKVEVVDIARRI 333

Query: 188 GGQDLVNLILEE 199
              D   L  E+
Sbjct: 334 DTFDTSVLPYED 345


>gi|256751315|ref|ZP_05492195.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749870|gb|EEU62894.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thermoanaerobacter ethanolicus CCSD1]
          Length = 380

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 57/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A +L SGG DS       + R   VE + F                + K+V+L    
Sbjct: 172 NGKATVLLSGGIDSPVAAWMMMKRGVEVEAVYFH------SPPYTSERAKDKVVDLCKVL 225

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                   +  +             ++ ++I +   P         + +  A  +A + G
Sbjct: 226 SQYGQRIKLHVVHF----------TDLQLEIYEKCPPKFTTIIMRRMMMKIAEKIAQKNG 275

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +           A            + +  PL+ + K E   LAQ I
Sbjct: 276 SMALITGESLGQVASQTIESLYVTNAS---------VSMPIFRPLIGMDKTEIIDLAQKI 326

Query: 188 GGQDLVNLILEE 199
              ++     E+
Sbjct: 327 STFEISIRPYED 338


>gi|167040647|ref|YP_001663632.1| thiamine biosynthesis protein ThiI [Thermoanaerobacter sp. X514]
 gi|300914688|ref|ZP_07132004.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thermoanaerobacter sp. X561]
 gi|307724078|ref|YP_003903829.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thermoanaerobacter sp. X513]
 gi|238687596|sp|B0K3I5|THII_THEPX RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|166854887|gb|ABY93296.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thermoanaerobacter sp. X514]
 gi|300889623|gb|EFK84769.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thermoanaerobacter sp. X561]
 gi|307581139|gb|ADN54538.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thermoanaerobacter sp. X513]
          Length = 380

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 57/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A +L SGG DS       + R   VE + F                + K+V+L    
Sbjct: 172 NGKATVLLSGGIDSPVAAWMMMKRGVEVEAVYFH------SPPYTSERAKDKVVDLCKVL 225

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                   +  +             ++ ++I +   P         + +  A  +A + G
Sbjct: 226 SQYGQRIKLHVVHF----------TDLQLEIYEKCPPKFTTIIMRRMMMKIAEKIAQKNG 275

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +           A            + +  PL+ + K E   LAQ I
Sbjct: 276 SMALITGESLGQVASQTIESLYVTNAS---------VSMPIFRPLIGMDKTEIIDLAQKI 326

Query: 188 GGQDLVNLILEE 199
              ++     E+
Sbjct: 327 STFEISIRPYED 338


>gi|167037213|ref|YP_001664791.1| thiamine biosynthesis protein ThiI [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320115632|ref|YP_004185791.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thermoanaerobacter brockii subsp. finnii Ako-1]
 gi|238687687|sp|B0K8J2|THII_THEP3 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|166856047|gb|ABY94455.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|319928723|gb|ADV79408.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thermoanaerobacter brockii subsp. finnii Ako-1]
          Length = 380

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 57/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A +L SGG DS       + R   VE + F                + K+V+L    
Sbjct: 172 NGKATVLLSGGIDSPVAAWMMMKRGVEVEAVYFH------SPPYTSERAKDKVVDLCKVL 225

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                   +  +             ++ ++I +   P         + +  A  +A + G
Sbjct: 226 SQYGQRIKLHVVHF----------TDLQLEIYEKCPPKFTTIIMRRMMMKIAEKIAQKNG 275

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +           A            + +  PL+ + K E   LAQ I
Sbjct: 276 SMALITGESLGQVASQTIESLYVTNAS---------VSMPIFRPLIGMDKTEIIDLAQKI 326

Query: 188 GGQDLVNLILEE 199
              ++     E+
Sbjct: 327 STFEISIRPYED 338


>gi|256003396|ref|ZP_05428387.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           thermocellum DSM 2360]
 gi|255992686|gb|EEU02777.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           thermocellum DSM 2360]
 gi|316940181|gb|ADU74215.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           thermocellum DSM 1313]
          Length = 392

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R   +E + F                ++K++EL    
Sbjct: 179 NGKAVLLLSGGIDSPVAGWMIAKRGVEIEAVHFY------SYPYTSERAKEKVIELTKIL 232

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                + ++  +              + ++I +               +  A  +A + G
Sbjct: 233 ATYCQKINLHIVPF----------TEIQLEINEKCPHEELTIIMRRAMMRIAEIIANKTG 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +           A+           + V  PL+ + K E   +A+ I
Sbjct: 283 ALALVTGESVGQVASQTIQSLVVTNAV---------VSLPVFRPLIGMDKNEVVDIAKKI 333

Query: 188 GGQDLVNLILEE 199
           G  +   L  E+
Sbjct: 334 GTFETSILPYED 345


>gi|125973578|ref|YP_001037488.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           thermocellum ATCC 27405]
 gi|281417782|ref|ZP_06248802.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           thermocellum JW20]
 gi|189030625|sp|A3DEB6|THII_CLOTH RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|125713803|gb|ABN52295.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           thermocellum ATCC 27405]
 gi|281409184|gb|EFB39442.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           thermocellum JW20]
          Length = 392

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R   +E + F                ++K++EL    
Sbjct: 179 NGKAVLLLSGGIDSPVAGWMIAKRGVEIEAVHFY------SYPYTSERAKEKVIELTKIL 232

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                + ++  +              + ++I +               +  A  +A + G
Sbjct: 233 ATYCQKINLHIVPF----------TEIQLEINEKCPHEELTIIMRRAMMRIAEIIANKTG 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +           A+           + V  PL+ + K E   +A+ I
Sbjct: 283 ALALVTGESVGQVASQTIQSLVVTNAV---------VSLPVFRPLIGMDKNEVVDIAKKI 333

Query: 188 GGQDLVNLILEE 199
           G  +   L  E+
Sbjct: 334 GTFETSILPYED 345


>gi|302385309|ref|YP_003821131.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           saccharolyticum WM1]
 gi|302195937|gb|ADL03508.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           saccharolyticum WM1]
          Length = 392

 Score =   99 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 58/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R  +++ + F                ++K+++L    
Sbjct: 180 NGKAMLLLSGGIDSPVAGYMIAKRGVKIDAVYFH------APPYTSERAKQKVIDLAKLV 233

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G  H+  +             ++ + I D               +  A  LA   G
Sbjct: 234 SRYSGPIHLHVVNF----------TDIQLYIYDKCPHEELTIIMRRYMMRIAERLAGECG 283

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +           A          + + V  P++   K E   +++ I
Sbjct: 284 AMALITGESIGQVASQTMQSLTATDAA---------TTMPVFRPVIGFDKQEIVDVSEKI 334

Query: 188 GGQDLVNLILEE 199
           G  +   L  E+
Sbjct: 335 GTYETSVLPFED 346


>gi|118577065|ref|YP_876808.1| PP-loop superfamily ATPase [Cenarchaeum symbiosum A]
 gi|118195586|gb|ABK78504.1| PP-loop superfamily ATPase [Cenarchaeum symbiosum A]
          Length = 223

 Score = 99.6 bits (246), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 87/236 (36%), Gaps = 31/236 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++FSGG DS    +    +  R+  ++F YGQR + E        +           
Sbjct: 2   KAVVVFSGGIDSLCMCAHLRKK-YRLYGITFLYGQRARRESRAARRCAEIAG-------- 52

Query: 70  SLGEDHILPLAILGDISH-SSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            L E     +  +GD+   S++  +   +I  +   +  VP RN +FL  AA  AY +G 
Sbjct: 53  -LKEHRTAKMEFMGDLYGGSNVLTDSRRRIPASFEGSIVVPVRNAVFLSVAAAWAYSIGA 111

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAI-------ETAINLGMESHVTVHTPLM-WLKKYET 180
             +  G    D +          R           AIN G    + + +P    L K + 
Sbjct: 112 ALVAYGAHTGDGNYPDCRPAFAKRMESALNLGEADAINKGTRKALYIWSPYREGLSKADL 171

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            K   D  G ++      ++ +CY        +    C  C +C  R+  + +   
Sbjct: 172 LKTGHDAFGDEIF-----QAWSCY-------ADGKKHCGKCESCSNRKAAFAKAGI 215


>gi|20808089|ref|NP_623260.1| thiamine biosynthesis ATP pyrophosphatase [Thermoanaerobacter
           tengcongensis MB4]
 gi|22001998|sp|Q8R9F0|THII_THETN RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|20516673|gb|AAM24864.1| Thiamine biosynthesis ATP pyrophosphatase [Thermoanaerobacter
           tengcongensis MB4]
          Length = 380

 Score = 99.2 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 58/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A +L SGG DS       + R   VE + F                ++K+V+L    
Sbjct: 172 NGKATVLLSGGIDSPVAAWMMMKRGVEVEAVYFH------SPPYTSDRAKEKVVDLCKVL 225

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                   +  +             ++ ++I +             + +  A  +A + G
Sbjct: 226 SQYGRGMRLHVVHF----------TDLQLEIYEKCPARLTTIIMRRMMMKIAEKIAQQNG 275

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +           +            + V  PL+ + K E   +AQ I
Sbjct: 276 SLALITGESLGQVASQTIESLYVTNSS---------VSLPVFRPLIGMDKREIIDIAQKI 326

Query: 188 GGQDLVNLILEE 199
           G  ++     E+
Sbjct: 327 GTYEISIRPYED 338


>gi|251797907|ref|YP_003012638.1| thiamine biosynthesis/tRNA modification protein ThiI [Paenibacillus
           sp. JDR-2]
 gi|247545533|gb|ACT02552.1| thiamine biosynthesis/tRNA modification protein ThiI [Paenibacillus
           sp. JDR-2]
          Length = 406

 Score = 99.2 bits (245), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 61/192 (31%), Gaps = 24/192 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS      A+ +   +E + F                ++K+++L  + 
Sbjct: 177 NGKAMLLLSGGIDSPVAGWMAMRKGLELEAVHFH------SYPFTSDKAKEKVIDLARRL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    L L             ++  ++      +  +       L     LA R G
Sbjct: 231 SYYAGAPLKLHLVPF---------TDIQTRLVQAKQDSMMITLMRRAMLRITEQLADRNG 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +       +          +G  + + +  PL+ + K E    A  I
Sbjct: 282 AGGIVTGESLGQVASQTLSSMN---------VIGRATVLPLLKPLIMMDKQEIINEAVRI 332

Query: 188 GGQDLVNLILEE 199
           G  +   L  E+
Sbjct: 333 GTFETSILPYED 344


>gi|330503750|ref|YP_004380619.1| hypothetical protein MDS_2836 [Pseudomonas mendocina NK-01]
 gi|328918036|gb|AEB58867.1| hypothetical protein MDS_2836 [Pseudomonas mendocina NK-01]
          Length = 455

 Score = 98.4 bits (243), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 61/225 (27%), Gaps = 11/225 (4%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           A+ LFSGG DS       L+       +S      +  E        K    L   +  S
Sbjct: 151 AVSLFSGGLDSLIGAIDLLEAGATPLLVS------HFGEGATSDAQGKLFAVLKKHYNTS 204

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
             E   + +     +     ++N                G  +            L   N
Sbjct: 205 SFERLRVGMTFDDGLVEGVGSENSTRGRSFLFFALGVFAGTGLGKAFVLRVPENGLIALN 264

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           + +       S      H    A    +   +     V  P     K E   +A   G Q
Sbjct: 265 VPLDP-LRLGSNSTRTTHPYYMARWNELLAELGIDGRVENPCWDKTKGE---MALSCGNQ 320

Query: 191 DLVNLILEESHTCYLGKRDKRYEWG-YGCNSCPACYLRQKGWMEF 234
            L+  +  +S +C    + +    G   C  C  C +R+      
Sbjct: 321 SLLAQLAPDSLSCSSPTKGRWQGLGIEHCGYCLPCLIRRAALDRA 365


>gi|89893414|ref|YP_516901.1| hypothetical protein DSY0668 [Desulfitobacterium hafniense Y51]
 gi|110816201|sp|Q24ZT5|QUEC1_DESHY RecName: Full=7-cyano-7-deazaguanine synthase 1; AltName:
           Full=7-cyano-7-carbaguanine synthase 1; AltName:
           Full=PreQ(0) synthase 1; AltName: Full=Queuosine
           biosynthesis protein queC 1
 gi|89332862|dbj|BAE82457.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 220

 Score = 98.4 bits (243), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 49/224 (21%), Positives = 82/224 (36%), Gaps = 24/224 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPK 66
               +LLFSGG DS+  L W L R   +  L  +YGQ++ + ELE    + K +      
Sbjct: 3   KNKVVLLFSGGIDSTVLLFWLLSRNYEIFPLFINYGQKSYEGELEAINKILKDLNTKNNL 62

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              ++ E  ++    L             +   +    + F P RN+I L  AAT  Y+L
Sbjct: 63  LTLNMPELQLVGSGALVGEY------PKNISSHNEWYASEFFPNRNMILLSIAATYGYKL 116

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I+ I IGV    Y        + +            +   +  P     + +  + A  
Sbjct: 117 QISKIAIGVVGDSYQDTTRTFLEAMEMTLAQ----SIARYELIAPFAGHPRQKVIEEAYR 172

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
           +       + L+ + +C              C  C +CY R+K 
Sbjct: 173 L------QVPLKSTFSC-------NAMGNRHCLLCTSCYEREKA 203


>gi|266621758|ref|ZP_06114693.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           hathewayi DSM 13479]
 gi|288866555|gb|EFC98853.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           hathewayi DSM 13479]
          Length = 392

 Score = 98.4 bits (243), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 57/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R  +++ + F                ++K+V+L    
Sbjct: 180 NGKAMLLLSGGIDSPVAGYMISKRGVKIDAVYFH------APPYTSERAKQKVVDLAKLV 233

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G  H+  +             ++ + I D               +  A  LA   G
Sbjct: 234 SKYSGPIHLHIVNF----------TDIQLYIYDQCPHEELTIIMRRYMMRIAERLAADAG 283

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +           A            + V  P++   K E   +A+ I
Sbjct: 284 AQALITGESIGQVASQTMQSLAATDAA---------CTMPVFRPVIGFDKQEIVDVAEKI 334

Query: 188 GGQDLVNLILEE 199
           G  +   L  E+
Sbjct: 335 GTYETSVLPFED 346


>gi|315924578|ref|ZP_07920797.1| thiamine biosynthesis protein ThiI [Pseudoramibacter alactolyticus
           ATCC 23263]
 gi|315622108|gb|EFV02070.1| thiamine biosynthesis protein ThiI [Pseudoramibacter alactolyticus
           ATCC 23263]
          Length = 395

 Score = 98.1 bits (242), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 61/192 (31%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A LL SGG DS         R  R   + F                ++K+++L    
Sbjct: 183 SGKAALLLSGGIDSPVAGYMMAKRGIRPIAVYFH------SFPFTSDRAKEKVIDLAKIL 236

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +             ++  KI +               +  A  +A + G
Sbjct: 237 TQYTGRMSLYVVPF----------TDIQTKIVEVCPERQTTLIIRRFMMRIAEKIAEQNG 286

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +++ G      +          +  E     G    + V  PL+ + K E  ++AQDI
Sbjct: 287 ALSLITGESLGQVAS---------QTQEGLAATGDVVAMPVLRPLIGMDKQEIVEIAQDI 337

Query: 188 GGQDLVNLILEE 199
           G  +   L  E+
Sbjct: 338 GTFETSILPYED 349


>gi|1143535|emb|CAA90569.1| ExsB [Sinorhizobium meliloti]
 gi|2808500|emb|CAA12530.1| ExsB protein [Sinorhizobium meliloti]
          Length = 234

 Score = 97.7 bits (241), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 73/202 (36%), Gaps = 22/202 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +++ SGG DS +         +    LSFDYGQR++ EL+      +++         
Sbjct: 2   KTIVICSGGLDSVSLAHKVAAEQELSGLLSFDYGQRHRKELDFAAACARRLG-------- 53

Query: 70  SLGEDHILPLAILG----DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 I+ +  +G      + +           +  +  T VP RN I L  A  +A  
Sbjct: 54  --VPHQIIDIREIGRRLTGSALTDEVDVPDGHYAEETMKATVVPNRNAIMLAIAFGVAAA 111

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIE--TAINLGMESHVTVHTPLMWLKKYETWKL 183
                +   V   D+  YPDCR   I A +      L   + V ++ P + + K +    
Sbjct: 112 RKADAVATAVHGGDHFIYPDCRPGFIDAFQAMQDHALDGYADVALYAPFVNVSKADIVAD 171

Query: 184 AQDIGGQDLVNLILEESHTCYL 205
                     +    E+ +CY 
Sbjct: 172 GARH------DTPFAETWSCYK 187


>gi|49478716|ref|YP_038696.1| thiamine biosynthesis protein ThiI [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|206977173|ref|ZP_03238072.1| thiamine biosynthesis protein ThiI [Bacillus cereus H3081.97]
 gi|217962135|ref|YP_002340705.1| thiamine biosynthesis protein ThiI [Bacillus cereus AH187]
 gi|222098121|ref|YP_002532178.1| thiamine biosynthesis protein thii [Bacillus cereus Q1]
 gi|81394601|sp|Q6HCN0|THII_BACHK RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|226703942|sp|B7HSI4|THII_BACC7 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|254784219|sp|B9J151|THII_BACCQ RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|49330272|gb|AAT60918.1| thiamine biosynthesis protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|206744658|gb|EDZ56066.1| thiamine biosynthesis protein ThiI [Bacillus cereus H3081.97]
 gi|217066178|gb|ACJ80428.1| thiamine biosynthesis protein ThiI [Bacillus cereus AH187]
 gi|221242179|gb|ACM14889.1| thiamine biosynthesis protein [Bacillus cereus Q1]
          Length = 404

 Score = 97.7 bits (241), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 56/190 (29%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L  +   
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTK 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              V   I      +  +     + +     +A      
Sbjct: 234 YCKRVTLHLVPF----------TEVQKTINKEIPSSYSMTVMRRMMMRITERIAEERNAL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             +  PL+ + K E  K+A++IG 
Sbjct: 284 AITTGESLGQVASQTLDSMHTINEVTNY---------PIIRPLITMDKLEIIKIAEEIGT 334

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 335 YDISIRPYED 344


>gi|229141384|ref|ZP_04269922.1| thiamine biosynthesis protein thiI [Bacillus cereus BDRD-ST26]
 gi|228642165|gb|EEK98458.1| thiamine biosynthesis protein thiI [Bacillus cereus BDRD-ST26]
          Length = 403

 Score = 97.7 bits (241), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 56/190 (29%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L  +   
Sbjct: 179 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTK 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              V   I      +  +     + +     +A      
Sbjct: 233 YCKRVTLHLVPF----------TEVQKTINKEIPSSYSMTVMRRMMMRITERIAEERNAL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             +  PL+ + K E  K+A++IG 
Sbjct: 283 AITTGESLGQVASQTLDSMHTINEVTNY---------PIIRPLITMDKLEIIKIAEEIGT 333

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 334 YDISIRPYED 343


>gi|307634707|gb|ADI83313.2| ExsB family protein [Geobacter sulfurreducens KN400]
          Length = 194

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 48/215 (22%), Positives = 87/215 (40%), Gaps = 28/215 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           + L SGG DS+     A +    V  L  +YGQ+   +         +          +L
Sbjct: 4   VNLVSGGLDSTLVGVLAREDGLSVYPLFINYGQKAVQQEWEACQRVHQ--------ALNL 55

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
                + L+  G +  S LT +     ++      F PGRN++FL+  +  AY++G + +
Sbjct: 56  PTPIKMDLSGFGKVICSGLTNDKMDVKEE-----AFTPGRNLLFLLMGSAYAYQVGASAV 110

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
            IG+    +S +PD R   +   E AI   +  ++ +  PL    K +  KL+ + G   
Sbjct: 111 AIGLLTEQFSLFPDQRTLFLEKAEQAIEAALGKNIKLLAPLSDFSKMDVVKLSIEKG--- 167

Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYL 226
                +  +++C+ G           C  C +C  
Sbjct: 168 -----IAGTYSCHAGGDQP-------CGHCISCLE 190


>gi|168067145|ref|XP_001785485.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662892|gb|EDQ49692.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 290

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 90/230 (39%), Gaps = 34/230 (14%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKW 67
           PS+++L SGG +S+  L         +  L  +YGQR   +E      +   +   + + 
Sbjct: 4   PSSVVLMSGGIESAVLLYNWRSSSALLHPLYINYGQRGAAMEERASDKICNNLGLELSRI 63

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             S   +         ++ H + +                +P RN++ L  AA+ A ++G
Sbjct: 64  DMSAVGNK------FRELQHGAKSFVP-------------LPHRNLVILGLAASYASQVG 104

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            + + +G+ + D   Y     + + +  +     +E  VT+  PL    K E  +L + +
Sbjct: 105 SSKVALGLNKDDLGSYSSASQNFMDSFRSTA-ASLEPPVTLIAPLSHFTKAEVIRLGKRL 163

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           G      +   ++++C +G+          C  C  C  RQ  +    E+
Sbjct: 164 G------VPFADTYSCMVGR-------PVHCGRCHQCRSRQLAFASASEQ 200


>gi|229825008|ref|ZP_04451077.1| hypothetical protein GCWU000182_00357 [Abiotrophia defectiva ATCC
           49176]
 gi|229790755|gb|EEP26869.1| hypothetical protein GCWU000182_00357 [Abiotrophia defectiva ATCC
           49176]
          Length = 401

 Score = 97.3 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 59/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+ L SGG DS         R  +VE + F                ++K+V+L      
Sbjct: 185 KAMCLLSGGIDSPVAAYMMARRGVKVEAVYFH------APPYTSERAKQKVVDLARLTAR 238

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G   +  +             ++ + I +    +          +  A  LA +    
Sbjct: 239 YAGNIKLYVVNF----------TDIQLAIYEKCPHDELTIIMRRYMMKIAEDLAKKDECF 288

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      +        T  A+           + V+ P++   K +   ++Q IG 
Sbjct: 289 GLVTGESIGQVASQTMQSLLTTNAVCE---------LPVYRPVICFDKQDIINISQRIGT 339

Query: 190 QDLVNLILEE 199
            +   L  E+
Sbjct: 340 FETSILPFED 349


>gi|302390017|ref|YP_003825838.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thermosediminibacter oceani DSM 16646]
 gi|302200645|gb|ADL08215.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thermosediminibacter oceani DSM 16646]
          Length = 389

 Score = 96.9 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 65/192 (33%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS       + R   +E + F                ++K+VEL    
Sbjct: 174 NGKAVLLLSGGIDSPVAGYMVMKRGVEIEPVYFH------SFPFTSDRAKEKVVELCRVL 227

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  +             +V  ++ +             + +  +  +A ++G
Sbjct: 228 SGYSGKIRLHVVNF----------TDVLKELGEKGPNELLTILMRRMMVRISQEIAKKIG 277

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +          + +E  +     + + V+ PL+   K E  +LA+ I
Sbjct: 278 AKALVTGESIGQVAS---------QTMEALMATNEVAELPVYRPLIGFDKVEIIELAKRI 328

Query: 188 GGQDLVNLILEE 199
           G  D+      +
Sbjct: 329 GTYDISIEPYAD 340


>gi|229163640|ref|ZP_04291589.1| thiamine biosynthesis protein thiI [Bacillus cereus R309803]
 gi|228619890|gb|EEK76767.1| thiamine biosynthesis protein thiI [Bacillus cereus R309803]
          Length = 404

 Score = 96.9 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 56/190 (29%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L  +   
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTK 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              V   I      +  +     + +     +A      
Sbjct: 234 YCKRVTLHLVPF----------TEVQKTINKEIPSSYSMTVMRRMMMRITERIAEERNAL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             V  PL+ + K E  K+A++IG 
Sbjct: 284 AITTGESLGQVASQTLDSMHTINEVTNY---------PVIRPLITMDKLEIIKIAEEIGT 334

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 335 YDISIRPYED 344


>gi|229186906|ref|ZP_04314061.1| thiamine biosynthesis protein thiI [Bacillus cereus BGSC 6E1]
 gi|228596643|gb|EEK54308.1| thiamine biosynthesis protein thiI [Bacillus cereus BGSC 6E1]
          Length = 404

 Score = 96.9 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 56/190 (29%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L  +   
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTK 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              V   I      +  +     + +     +A      
Sbjct: 234 YCKRVTLHLVPF----------TEVQKTINKEIPSSYSMTVMRRMMMRITERIAEERNAL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             V  PL+ + K E  K+A++IG 
Sbjct: 284 AITTGESLGQVASQTLDSMHTINEVTNY---------PVIRPLITMDKLEIIKIAEEIGT 334

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 335 YDISIRPYED 344


>gi|83754678|pdb|2C5S|A Chain A, Crystal Structure Of Bacillus Anthracis Thii, A Trna-
           Modifying Enzyme Containing The Predicted Rna-Binding
           Thump Domain
          Length = 413

 Score = 96.9 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 56/190 (29%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L  +   
Sbjct: 189 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTK 242

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              V   I      +  +     + +     +A      
Sbjct: 243 YCKRVTLHLVPF----------TEVQKTINKEIPSSYSMTVMRRMMMRITERIAEERNAL 292

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             V  PL+ + K E  K+A++IG 
Sbjct: 293 AITTGESLGQVASQTLDSMHTINEVTNY---------PVIRPLITMDKLEIIKIAEEIGT 343

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 344 YDISIRPYED 353


>gi|229072150|ref|ZP_04205359.1| thiamine biosynthesis protein thiI [Bacillus cereus F65185]
 gi|229081900|ref|ZP_04214392.1| thiamine biosynthesis protein thiI [Bacillus cereus Rock4-2]
 gi|229180966|ref|ZP_04308301.1| thiamine biosynthesis protein thiI [Bacillus cereus 172560W]
 gi|228602523|gb|EEK60009.1| thiamine biosynthesis protein thiI [Bacillus cereus 172560W]
 gi|228701488|gb|EEL53982.1| thiamine biosynthesis protein thiI [Bacillus cereus Rock4-2]
 gi|228711084|gb|EEL63050.1| thiamine biosynthesis protein thiI [Bacillus cereus F65185]
          Length = 404

 Score = 96.9 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 56/190 (29%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L  +   
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTK 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              V   I      +  +     + +     +A      
Sbjct: 234 YCKRVTLHLVPF----------TEVQKTINKEIPSSYSMTVMRRMMMRITERIAEERNAL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             V  PL+ + K E  K+A++IG 
Sbjct: 284 AITTGESLGQVASQTLDSMHTINEVTNY---------PVIRPLITMDKLEIIKIAEEIGT 334

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 335 YDISIRPYED 344


>gi|229192851|ref|ZP_04319809.1| thiamine biosynthesis protein thiI [Bacillus cereus ATCC 10876]
 gi|228590690|gb|EEK48551.1| thiamine biosynthesis protein thiI [Bacillus cereus ATCC 10876]
          Length = 404

 Score = 96.9 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 56/190 (29%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L  +   
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTK 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              V   I      +  +     + +     +A      
Sbjct: 234 YCKRVTLHLVPF----------TEVQKTINKEIPSSYSMTVMRRMMMRITERIAEERNAL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             V  PL+ + K E  K+A++IG 
Sbjct: 284 AITTGESLGQVASQTLDSMHTINEVTNY---------PVIRPLITMDKLEIIKIAEEIGT 334

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 335 YDISIRPYED 344


>gi|42783830|ref|NP_981077.1| thiamine biosynthesis protein ThiI [Bacillus cereus ATCC 10987]
 gi|81408868|sp|Q72Z85|THII_BACC1 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|42739760|gb|AAS43685.1| thiamine biosynthesis protein ThiI [Bacillus cereus ATCC 10987]
          Length = 404

 Score = 96.9 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 56/190 (29%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L  +   
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTK 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              V   I      +  +     + +     +A      
Sbjct: 234 YCKRVTLHLVPF----------TEVQKTINKEIPSSYSMTVMRRMMMRITERIAEERNAL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             V  PL+ + K E  K+A++IG 
Sbjct: 284 AITTGESLGQVASQTLDSMHTINEVTNY---------PVIRPLITMDKLEIIKIAEEIGT 334

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 335 YDISIRPYED 344


>gi|30022722|ref|NP_834353.1| thiamine biosynthesis protein ThiI [Bacillus cereus ATCC 14579]
 gi|229129931|ref|ZP_04258897.1| thiamine biosynthesis protein thiI [Bacillus cereus BDRD-Cer4]
 gi|33301700|sp|Q817B1|THII_BACCR RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|29898281|gb|AAP11554.1| Thiamine biosynthesis protein thiI [Bacillus cereus ATCC 14579]
 gi|228653622|gb|EEL09494.1| thiamine biosynthesis protein thiI [Bacillus cereus BDRD-Cer4]
          Length = 404

 Score = 96.9 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 56/190 (29%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L  +   
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTK 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              V   I      +  +     + +     +A      
Sbjct: 234 YCKRVTLHLVPF----------TEVQKTINKEIPSSYSMTVMRRMMMRITERIAEERNAL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             V  PL+ + K E  K+A++IG 
Sbjct: 284 AITTGESLGQVASQTLDSMHTINEVTNY---------PVIRPLITMDKLEIIKIAEEIGT 334

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 335 YDISIRPYED 344


>gi|49187539|ref|YP_030792.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. Sterne]
 gi|65322018|ref|ZP_00394977.1| COG0301: Thiamine biosynthesis ATP pyrophosphatase [Bacillus
           anthracis str. A2012]
 gi|118479788|ref|YP_896939.1| thiamine biosynthesis protein ThiI [Bacillus thuringiensis str. Al
           Hakam]
 gi|165869763|ref|ZP_02214421.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. A0488]
 gi|167633806|ref|ZP_02392129.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. A0442]
 gi|167638047|ref|ZP_02396325.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. A0193]
 gi|170685994|ref|ZP_02877217.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. A0465]
 gi|170705487|ref|ZP_02895951.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. A0389]
 gi|177651153|ref|ZP_02933984.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. A0174]
 gi|190569065|ref|ZP_03021965.1| thiamine biosynthesis protein ThiI [Bacillus anthracis
           Tsiankovskii-I]
 gi|196032869|ref|ZP_03100282.1| thiamine biosynthesis protein ThiI [Bacillus cereus W]
 gi|196040790|ref|ZP_03108088.1| thiamine biosynthesis protein ThiI [Bacillus cereus NVH0597-99]
 gi|196043841|ref|ZP_03111078.1| thiamine biosynthesis protein ThiI [Bacillus cereus 03BB108]
 gi|218905877|ref|YP_002453711.1| thiamine biosynthesis protein ThiI [Bacillus cereus AH820]
 gi|225866628|ref|YP_002752006.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
           cereus 03BB102]
 gi|227817438|ref|YP_002817447.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
           anthracis str. CDC 684]
 gi|228917293|ref|ZP_04080848.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228929701|ref|ZP_04092718.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228935957|ref|ZP_04098767.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228948377|ref|ZP_04110660.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|229093743|ref|ZP_04224842.1| thiamine biosynthesis protein thiI [Bacillus cereus Rock3-42]
 gi|229124217|ref|ZP_04253409.1| thiamine biosynthesis protein thiI [Bacillus cereus 95/8201]
 gi|229604388|ref|YP_002868929.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
           anthracis str. A0248]
 gi|254687459|ref|ZP_05151315.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str.
           CNEVA-9066]
 gi|254725022|ref|ZP_05186805.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. A1055]
 gi|254736759|ref|ZP_05194465.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. Western
           North America USA6153]
 gi|254741796|ref|ZP_05199483.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. Kruger
           B]
 gi|254754606|ref|ZP_05206641.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. Vollum]
 gi|254757438|ref|ZP_05209465.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str.
           Australia 94]
 gi|300118479|ref|ZP_07056222.1| thiamine biosynthesis protein ThiI [Bacillus cereus SJ1]
 gi|301056155|ref|YP_003794366.1| thiamine biosynthesis protein ThiI [Bacillus anthracis CI]
 gi|189030619|sp|A0RJN9|THII_BACAH RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|226703939|sp|B7JS23|THII_BACC0 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|254784216|sp|C3PBB3|THII_BACAA RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|254784217|sp|C3L9V4|THII_BACAC RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|254784218|sp|C1EUZ5|THII_BACC3 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|49181466|gb|AAT56842.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. Sterne]
 gi|118419013|gb|ABK87432.1| thiamine biosynthesis protein [Bacillus thuringiensis str. Al
           Hakam]
 gi|164714592|gb|EDR20111.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. A0488]
 gi|167513864|gb|EDR89232.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. A0193]
 gi|167530607|gb|EDR93309.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. A0442]
 gi|170129612|gb|EDS98475.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. A0389]
 gi|170670458|gb|EDT21198.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. A0465]
 gi|172082979|gb|EDT68041.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. A0174]
 gi|190559847|gb|EDV13832.1| thiamine biosynthesis protein ThiI [Bacillus anthracis
           Tsiankovskii-I]
 gi|195994298|gb|EDX58253.1| thiamine biosynthesis protein ThiI [Bacillus cereus W]
 gi|196025177|gb|EDX63847.1| thiamine biosynthesis protein ThiI [Bacillus cereus 03BB108]
 gi|196028244|gb|EDX66853.1| thiamine biosynthesis protein ThiI [Bacillus cereus NVH0597-99]
 gi|218540024|gb|ACK92422.1| thiamine biosynthesis protein ThiI [Bacillus cereus AH820]
 gi|225790990|gb|ACO31207.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
           cereus 03BB102]
 gi|227007059|gb|ACP16802.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
           anthracis str. CDC 684]
 gi|228659519|gb|EEL15167.1| thiamine biosynthesis protein thiI [Bacillus cereus 95/8201]
 gi|228689628|gb|EEL43436.1| thiamine biosynthesis protein thiI [Bacillus cereus Rock3-42]
 gi|228811364|gb|EEM57702.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228823725|gb|EEM69547.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228829880|gb|EEM75500.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228842334|gb|EEM87427.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|229268796|gb|ACQ50433.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
           anthracis str. A0248]
 gi|298724151|gb|EFI64850.1| thiamine biosynthesis protein ThiI [Bacillus cereus SJ1]
 gi|300378324|gb|ADK07228.1| thiamine biosynthesis protein ThiI [Bacillus cereus biovar
           anthracis str. CI]
          Length = 404

 Score = 96.9 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 56/190 (29%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L  +   
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTK 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              V   I      +  +     + +     +A      
Sbjct: 234 YCKRVTLHLVPF----------TEVQKTINKEIPSSYSMTVMRRMMMRITERIAEERNAL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             V  PL+ + K E  K+A++IG 
Sbjct: 284 AITTGESLGQVASQTLDSMHTINEVTNY---------PVIRPLITMDKLEIIKIAEEIGT 334

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 335 YDISIRPYED 344


>gi|324328541|gb|ADY23801.1| thiamine biosynthesis protein ThiI [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 404

 Score = 96.9 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 56/190 (29%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L  +   
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTK 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              V   I      +  +     + +     +A      
Sbjct: 234 YCKRVTLHLVPF----------TEVQKTINKEIPSSYSMTVMRRMMMRITERIAEERNAL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             V  PL+ + K E  K+A++IG 
Sbjct: 284 AITTGESLGQVASQTLDSMHTINEVTNY---------PVIRPLITMDKLEIIKIAEEIGT 334

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 335 YDISIRPYED 344


>gi|229147208|ref|ZP_04275566.1| thiamine biosynthesis protein thiI [Bacillus cereus BDRD-ST24]
 gi|228636318|gb|EEK92790.1| thiamine biosynthesis protein thiI [Bacillus cereus BDRD-ST24]
          Length = 404

 Score = 96.9 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 56/190 (29%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L  +   
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTK 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              V   I      +  +     + +     +A      
Sbjct: 234 YCKRVTLHLVPF----------TEVQKTINKEIPSSYSMTVMRRMMMRITERIAEERNAL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             V  PL+ + K E  K+A++IG 
Sbjct: 284 AITTGESLGQVASQTLDSMHTINEVTNY---------PVIRPLITMDKLEIIKIAEEIGT 334

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 335 YDISIRPYED 344


>gi|218232220|ref|YP_002369442.1| thiamine biosynthesis protein ThiI [Bacillus cereus B4264]
 gi|228923396|ref|ZP_04086684.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228960915|ref|ZP_04122548.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|229048354|ref|ZP_04193922.1| thiamine biosynthesis protein thiI [Bacillus cereus AH676]
 gi|229112113|ref|ZP_04241656.1| thiamine biosynthesis protein thiI [Bacillus cereus Rock1-15]
 gi|229152842|ref|ZP_04281025.1| thiamine biosynthesis protein thiI [Bacillus cereus m1550]
 gi|296505116|ref|YP_003666816.1| thiamine biosynthesis protein ThiI [Bacillus thuringiensis BMB171]
 gi|226703941|sp|B7H703|THII_BACC4 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|218160177|gb|ACK60169.1| thiamine biosynthesis protein ThiI [Bacillus cereus B4264]
 gi|228630662|gb|EEK87308.1| thiamine biosynthesis protein thiI [Bacillus cereus m1550]
 gi|228671436|gb|EEL26737.1| thiamine biosynthesis protein thiI [Bacillus cereus Rock1-15]
 gi|228723079|gb|EEL74456.1| thiamine biosynthesis protein thiI [Bacillus cereus AH676]
 gi|228798811|gb|EEM45791.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228836350|gb|EEM81703.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|296326168|gb|ADH09096.1| thiamine biosynthesis protein ThiI [Bacillus thuringiensis BMB171]
          Length = 404

 Score = 96.9 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 56/190 (29%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L  +   
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTK 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              V   I      +  +     + +     +A      
Sbjct: 234 YCKRVTLHLVPF----------TEVQKTINKEIPSSYSMTVMRRMMMRITERIAEERNAL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             V  PL+ + K E  K+A++IG 
Sbjct: 284 AITTGESLGQVASQTLDSMHTINEVTNY---------PVIRPLITMDKLEIIKIAEEIGT 334

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 335 YDISIRPYED 344


>gi|30264721|ref|NP_847098.1| thiamine biosynthesis protein ThiI [Bacillus anthracis str. Ames]
 gi|47778341|ref|YP_021542.2| thiamine biosynthesis protein ThiI [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|33301702|sp|Q81KU0|THII_BACAN RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|30259396|gb|AAP28584.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
           anthracis str. Ames]
 gi|47552046|gb|AAT34017.2| thiamine biosynthesis protein ThiI [Bacillus anthracis str. 'Ames
           Ancestor']
          Length = 403

 Score = 96.9 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 56/190 (29%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L  +   
Sbjct: 179 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTK 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              V   I      +  +     + +     +A      
Sbjct: 233 YCKRVTLHLVPF----------TEVQKTINKEIPSSYSMTVMRRMMMRITERIAEERNAL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             V  PL+ + K E  K+A++IG 
Sbjct: 283 AITTGESLGQVASQTLDSMHTINEVTNY---------PVIRPLITMDKLEIIKIAEEIGT 333

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 334 YDISIRPYED 343


>gi|332799546|ref|YP_004461045.1| tRNA sulfurtransferase [Tepidanaerobacter sp. Re1]
 gi|332697281|gb|AEE91738.1| tRNA sulfurtransferase [Tepidanaerobacter sp. Re1]
          Length = 387

 Score = 96.9 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 61/192 (31%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS       + R   +E + F                ++K++EL    
Sbjct: 175 NGKAVLLLSGGIDSPVAAYMLMKRGVEIEPVYFH------SFPFTSDRAKEKVIELCRVL 228

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  +              V  +I  N            + +  A  +A  +G
Sbjct: 229 AGYSGQMRLHVVNF----------TEVLKQISKNTPDEFLTIIMRRMMIRIAQEIAENVG 278

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +          + +E  +     + + +  PL+   K E   +A+ I
Sbjct: 279 AKALVTGESLGQVAS---------QTMEALVATNEVATMPIFRPLIGCDKIEIMDIAKKI 329

Query: 188 GGQDLVNLILEE 199
           G  D+      +
Sbjct: 330 GTYDISIEPYAD 341


>gi|47565062|ref|ZP_00236105.1| thiamine biosynthesis protein ThiI [Bacillus cereus G9241]
 gi|52140860|ref|YP_085969.1| thiamine biosynthesis protein ThiI [Bacillus cereus E33L]
 gi|228987898|ref|ZP_04148006.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229158255|ref|ZP_04286322.1| thiamine biosynthesis protein thiI [Bacillus cereus ATCC 4342]
 gi|81685899|sp|Q633E8|THII_BACCZ RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|47557848|gb|EAL16173.1| thiamine biosynthesis protein ThiI [Bacillus cereus G9241]
 gi|51974329|gb|AAU15879.1| thiamine biosynthesis protein [Bacillus cereus E33L]
 gi|228625213|gb|EEK81973.1| thiamine biosynthesis protein thiI [Bacillus cereus ATCC 4342]
 gi|228771821|gb|EEM20279.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 404

 Score = 96.9 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 56/190 (29%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L  +   
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTK 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              V   I      +  +     + +     +A      
Sbjct: 234 YCKRVTLHLVPF----------TEVQKTINKEIPSSYSMTVMRRMMMRITERIAEERNAL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             V  PL+ + K E  K+A++IG 
Sbjct: 284 AITTGESLGQVASQTLDSMHTINEVTNY---------PVIRPLITMDKLEIIKIAEEIGT 334

Query: 190 QDLVNLILEE 199
            ++     E+
Sbjct: 335 YEISIRPYED 344


>gi|228941828|ref|ZP_04104375.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228974753|ref|ZP_04135319.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981348|ref|ZP_04141648.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis Bt407]
 gi|228778548|gb|EEM26815.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis Bt407]
 gi|228785156|gb|EEM33169.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228818040|gb|EEM64118.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|326942433|gb|AEA18329.1| thiamine biosynthesis protein ThiI [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 404

 Score = 96.5 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 56/190 (29%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L  +   
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTK 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              V   I      +  +     + +     +A      
Sbjct: 234 YCKRVTLHLIPF----------TEVQKTINKEIPSSYSMTVMRRMMMRITEQIAEERNAL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             V  PL+ + K E  K+A++IG 
Sbjct: 284 AITTGESLGQVASQTLDSMHTINEVTNY---------PVIRPLITMDKLEIIKIAEEIGT 334

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 335 YDISIRPYED 344


>gi|167747074|ref|ZP_02419201.1| hypothetical protein ANACAC_01786 [Anaerostipes caccae DSM 14662]
 gi|317471889|ref|ZP_07931224.1| thiamine biosynthesis/tRNA modification protein ThiI [Anaerostipes
           sp. 3_2_56FAA]
 gi|167654034|gb|EDR98163.1| hypothetical protein ANACAC_01786 [Anaerostipes caccae DSM 14662]
 gi|316900662|gb|EFV22641.1| thiamine biosynthesis/tRNA modification protein ThiI [Anaerostipes
           sp. 3_2_56FAA]
          Length = 392

 Score = 96.5 bits (238), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 56/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R  R++   F                ++K+V+L    
Sbjct: 179 NGKAMLLLSGGIDSPVAGYMIAKRGVRIDATYFH------APPYTSERAKQKVVDLAKIV 232

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G  H+  +             ++ + I +    +          +  A   A    
Sbjct: 233 SKYAGPIHLHVVNF----------TDIQLAIYEKCPHDQLTIIMRRYMMKIAEHFAQEND 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +          + I          H+ V  PL+ + K E   +A+ I
Sbjct: 283 ALALITGESIGQVAS---------QTIHNLAITNDVCHMPVFRPLIGMDKQEIVNIAERI 333

Query: 188 GGQDLVNLILEE 199
              +      E+
Sbjct: 334 DTFETSIQPFED 345


>gi|226313701|ref|YP_002773595.1| thiamine biosynthesis protein ThiI [Brevibacillus brevis NBRC
           100599]
 gi|254784220|sp|C0ZH32|THII_BREBN RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|226096649|dbj|BAH45091.1| putative thiamine biosynthesis protein ThiI [Brevibacillus brevis
           NBRC 100599]
          Length = 399

 Score = 96.5 bits (238), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 56/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   LLL SGG DS       L R   +E + F                 +K+ +L  K 
Sbjct: 177 SGKVLLLLSGGIDSPVAGWMMLKRGVTLEAIHFH------SYPFTSERALQKVRDLAHKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +              +   I++    +  +       +  +  +A    
Sbjct: 231 TKWGGTVRLHVVPF----------TEIQTAIREKCPEDYLITIMRRFMMRISERVAENTN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +  G      +       D          +     + +  PL+ + K +   +++ I
Sbjct: 281 AKALATGESLGQVASQTLESMD---------TINKVISIPILRPLVAMDKVDIVDISRQI 331

Query: 188 GGQDLVNLILEE 199
              +L  L  E+
Sbjct: 332 DTYELSILPYED 343


>gi|229076149|ref|ZP_04209117.1| thiamine biosynthesis protein thiI [Bacillus cereus Rock4-18]
 gi|229099107|ref|ZP_04230041.1| thiamine biosynthesis protein thiI [Bacillus cereus Rock3-29]
 gi|229105275|ref|ZP_04235924.1| thiamine biosynthesis protein thiI [Bacillus cereus Rock3-28]
 gi|229118137|ref|ZP_04247496.1| thiamine biosynthesis protein thiI [Bacillus cereus Rock1-3]
 gi|228665360|gb|EEL20843.1| thiamine biosynthesis protein thiI [Bacillus cereus Rock1-3]
 gi|228678201|gb|EEL32429.1| thiamine biosynthesis protein thiI [Bacillus cereus Rock3-28]
 gi|228684335|gb|EEL38279.1| thiamine biosynthesis protein thiI [Bacillus cereus Rock3-29]
 gi|228707012|gb|EEL59217.1| thiamine biosynthesis protein thiI [Bacillus cereus Rock4-18]
          Length = 404

 Score = 96.5 bits (238), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 56/190 (29%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L  +   
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTK 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              V   I      +  +     + +     +A      
Sbjct: 234 YCKRVTLHLVPF----------TEVQKTINKEIPSSYSMTVMRRMMMRITEQIAEERNAL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             V  PL+ + K E  K+A++IG 
Sbjct: 284 AITTGESLGQVASQTLDSMHTINEVTNY---------PVIRPLITMDKLEIIKIAEEIGT 334

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 335 YDISIRPYED 344


>gi|260912390|ref|ZP_05918937.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260633490|gb|EEX51633.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 432

 Score = 96.1 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 61/224 (27%), Gaps = 16/224 (7%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
            + SGG DS       L        +S   G +     +  +    KI            
Sbjct: 156 CMLSGGLDSFIGAINLLKDGKEPIFVSHYGGGKGVKVYQDSVVNSLKI--------QYAV 207

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           +            + +  T      +   +         + + L         L I   V
Sbjct: 208 DSKRFFRFYAASQNGAEDTTRSRSLMFFAHAIVLASGIGHHVDLYVPENGVISLNIPLTV 267

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
           +       S      H     +   +  G++  +++  P     K E  K  +D+   D 
Sbjct: 268 M----RLGSLSTRTTHPYFMGMFQKLLTGLDIDISLVNPFQMQTKGEMMKTCKDL---DF 320

Query: 193 VNLILEESHTCYLGKRDKRYEWGY-GCNSCPACYLRQKGWMEFK 235
           +N   +++ +C    + +        C  C  C +R+       
Sbjct: 321 LNAHYQDTLSCSHPDQGRWTGDAVGHCGECLPCTIRKAAIKAAG 364


>gi|326791227|ref|YP_004309048.1| tRNA sulfurtransferase [Clostridium lentocellum DSM 5427]
 gi|326541991|gb|ADZ83850.1| tRNA sulfurtransferase [Clostridium lentocellum DSM 5427]
          Length = 393

 Score = 96.1 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 57/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A LL SGG DS         R   V+ + F                ++K+V+L  K 
Sbjct: 181 NGKATLLLSGGIDSPVAGWMIAKRGVEVDAVYFH------APPYTSDRAKEKVVDLAKKV 234

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +             ++ +KI +             I +     +A + G
Sbjct: 235 AIYTGNMKLHIINF----------TDIQLKIYERCPHEQLTLIMRRIMMYITEAIAKKNG 284

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +                      + + V  PL+   K E  ++A+ I
Sbjct: 285 SMGLITGESIGQVASQTMQSLVVTD---------DAATMPVFRPLIGFDKEEIVQIAKKI 335

Query: 188 GGQDLVNLILEE 199
              +   L  E+
Sbjct: 336 DTFETSILPYED 347


>gi|289209582|ref|YP_003461648.1| Queuosine synthesis-like protein [Thioalkalivibrio sp. K90mix]
 gi|288945213|gb|ADC72912.1| Queuosine synthesis-like protein [Thioalkalivibrio sp. K90mix]
          Length = 217

 Score = 96.1 bits (237), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 72/224 (32%), Gaps = 33/224 (14%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           LLL SGG +SS  L+    +   +  L  DYGQRN       +              D  
Sbjct: 15  LLLLSGGIESSALLAQRHAQGRPLRALWVDYGQRNAERERAAIRAL---------GADYG 65

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
            +   + L  L            A   +   + +  +P RN++ L  A  LA   G   I
Sbjct: 66  VDPVEMDLRALRQ----------AFAKRSEWVAHVPLPQRNLLVLALAINLAEHQGAGRI 115

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           ++ +   D    P  R   I     A+   +   + +  PL+   K +       +G   
Sbjct: 116 LLALNREDQGHGPGSRPSFIGR-LAALADELVPGLAIEAPLIAQSKADIIYTTDPLG--- 171

Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
              +    + +C              C  CP C  R+  +    
Sbjct: 172 ---IDWSRTWSC-------LLAQSLHCGRCPQCQARRAAFASAG 205


>gi|253576098|ref|ZP_04853430.1| thiamine biosynthesis/tRNA modification protein ThiI [Paenibacillus
           sp. oral taxon 786 str. D14]
 gi|251844441|gb|EES72457.1| thiamine biosynthesis/tRNA modification protein ThiI [Paenibacillus
           sp. oral taxon 786 str. D14]
          Length = 410

 Score = 96.1 bits (237), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 62/192 (32%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS      AL R   +E + F                 +K+++L    
Sbjct: 178 NGKAMLLLSGGIDSPVAGWSALRRGLEIECVHFH------SYPFTSKKAEQKVIDLANVL 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +              +  K+      N  +       L  A  LA R G
Sbjct: 232 AQYSGFIKLHLVPF----------TEIQTKLAQTGQDNLIITMMRRAMLRIATKLAERNG 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +       +          +G  +++ +  PL+   K +   +AQ I
Sbjct: 282 ALALVTGDSLGQVASQTLSSMN---------AIGRVTNLPILRPLVMTDKVDIIAMAQQI 332

Query: 188 GGQDLVNLILEE 199
           G  DL  L  E+
Sbjct: 333 GTYDLSILPYED 344


>gi|220936088|ref|YP_002514987.1| ExsB family protein [Thioalkalivibrio sp. HL-EbGR7]
 gi|219997398|gb|ACL74000.1| ExsB family protein [Thioalkalivibrio sp. HL-EbGR7]
          Length = 213

 Score = 96.1 bits (237), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 51/233 (21%), Positives = 85/233 (36%), Gaps = 38/233 (16%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           +LLL SGG +S+T L+    R   V  L  DYGQR  +                 + +  
Sbjct: 12  SLLLLSGGIESATLLA-LESRQRPVTPLVVDYGQRGALRERDAARA---------QCESH 61

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                 L L+  G      L K   +           +P RN++ L  A + A R GI  
Sbjct: 62  GLTPVELDLSATGGTFRDGLLKRPHVP----------LPHRNLVILSLAVSYAARGGIDR 111

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V+ +   D + YP      +      I+  ++  + + TPL+   K    +L   +G  
Sbjct: 112 VVLALNRDDLAAYPSASPGFLEHFRALIHD-LQPGLEITTPLIDRDKAGVIRLGVSLG-- 168

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQ 239
               +    + +C LG           C +CP C  R+  +         +Y+
Sbjct: 169 ----VDFARTWSCLLGYE-------THCGACPQCLHRRAAFRAAGIADPTRYR 210


>gi|317129945|ref|YP_004096227.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
           cellulosilyticus DSM 2522]
 gi|315474893|gb|ADU31496.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
           cellulosilyticus DSM 2522]
          Length = 402

 Score = 96.1 bits (237), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 60/195 (30%), Gaps = 25/195 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           I  A   LL+ SGG DS      AL R   +E + F                R+K+ +L 
Sbjct: 175 IHTAGKVLLMLSGGIDSPVAGYLALKRGVELEAIHFH------SPPFTNDRARQKVEDLT 228

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  G   +  +                  I      +  +       L  A  +A 
Sbjct: 229 RVLTRFGGHIKLHIIPF----------TEAQKAIHQQIPDSYEMTVMRRFMLRIAEGVAK 278

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           +     IV G      +                  +   +++ V  PL+ + K E  ++A
Sbjct: 279 KKHALAIVNGESLGQVASQTLDSMH---------TINDVTNLPVLRPLVTMDKLEVIEIA 329

Query: 185 QDIGGQDLVNLILEE 199
           + IG  +L  L  E+
Sbjct: 330 KKIGTYELSILPFED 344


>gi|206969922|ref|ZP_03230876.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
           cereus AH1134]
 gi|206735610|gb|EDZ52778.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
           cereus AH1134]
          Length = 404

 Score = 96.1 bits (237), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 56/190 (29%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L  +   
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTK 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              V   I      +  +     + +     +A      
Sbjct: 234 YCKRVTLHLVPF----------TEVQKTINKEIPSSYSMTVMRRMMMRITERIAEERNAL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             V  PL+ + K E  K+A++IG 
Sbjct: 284 AITTGESLGQVASQTLDSMHTINEVTNY---------PVIRPLITMDKLEIIKIAEEIGT 334

Query: 190 QDLVNLILEE 199
            ++     E+
Sbjct: 335 YNISIRPYED 344


>gi|302185402|ref|ZP_07262075.1| ExsB family protein [Pseudomonas syringae pv. syringae 642]
          Length = 200

 Score = 96.1 bits (237), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 57/215 (26%), Positives = 84/215 (39%), Gaps = 28/215 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           + L SGG DS+     A +   ++  L  DYGQR +        V  K           L
Sbjct: 4   VTLVSGGLDSTLVAKLAQEEGLQIFPLFVDYGQRARDRELAACRVAMK--------TLGL 55

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
            E  I  L   G +  S LT      I D      F PGRN++FL+ AA  A++     I
Sbjct: 56  PEPEIASLGGFGKLIRSGLTDTSLHIIDD-----AFTPGRNMLFLLTAAAYAHQKNADAI 110

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
            IG+     S +PD     +   E  I+L M   + V  PL    K +   LA + G   
Sbjct: 111 SIGLLHESTSLFPDQTSGFLAEAERMISLCMGRTIKVLAPLSVFTKPDVVALAAEKG--- 167

Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYL 226
                +  +++C++G           C +C +C  
Sbjct: 168 -----ISGTYSCHIGDEVP-------CGNCISCNE 190


>gi|228954917|ref|ZP_04116935.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228804738|gb|EEM51339.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 404

 Score = 95.8 bits (236), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 56/190 (29%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L  +   
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTK 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              V   I      +  +     + +     +A      
Sbjct: 234 YCKRVTLHLVPF----------TEVQKTINKEIPSSYSMTVMRRMMMRITERIAEERNAL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             V  PL+ + K E  K++++IG 
Sbjct: 284 AITTGESLGQVASQTLDSMHTINEVTNY---------PVIRPLITMDKLEIIKISEEIGT 334

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 335 YDISIRPYED 344


>gi|229032299|ref|ZP_04188272.1| thiamine biosynthesis protein thiI [Bacillus cereus AH1271]
 gi|228729079|gb|EEL80082.1| thiamine biosynthesis protein thiI [Bacillus cereus AH1271]
          Length = 404

 Score = 95.8 bits (236), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 57/190 (30%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L  +   
Sbjct: 180 KVMVLLSGGIDSPVATYLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTK 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +             +V   I      +  +     + +     +A      
Sbjct: 234 YCKRVTLHLVPF----------TDVQKTINKEIPSSYSMTVMRRMMMRITERIAEERNAL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             V  PL+ + K E  K+A++IG 
Sbjct: 284 AITTGESLGQVASQTLDSMHTINEVTNY---------PVIRPLITMDKLEIIKIAEEIGT 334

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 335 YDISIRPYED 344


>gi|332976064|gb|EGK12934.1| thiamine biosynthesis protein ThiI [Desmospora sp. 8437]
          Length = 398

 Score = 95.8 bits (236), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 67/192 (34%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS     + L R   +E + F                R+K+ +L    
Sbjct: 176 SGRVMLMLSGGIDSPVAAYYVLKRGAALEAVHFH------SYPFTSERARQKVEDLAQIL 229

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  +              +  +I++    +  +       +  +  LA R G
Sbjct: 230 TRYAGKIRLHVVPF----------TEIQTQIREKCPSSYMITIMRRFMVRISEELARRNG 279

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +          + +E+   +   + + +  PL+ + K E  K+++ I
Sbjct: 280 ALALVTGESLGQVAS---------QTLESMNAINDVTRMPILRPLVGMDKQEIMKVSRGI 330

Query: 188 GGQDLVNLILEE 199
           G  +   L  E+
Sbjct: 331 GTYETSILPYED 342


>gi|169796893|ref|YP_001714686.1| hypothetical protein ABAYE2885 [Acinetobacter baumannii AYE]
 gi|213156706|ref|YP_002318367.1| hypothetical protein AB57_0976 [Acinetobacter baumannii AB0057]
 gi|301347575|ref|ZP_07228316.1| hypothetical protein AbauAB0_15040 [Acinetobacter baumannii AB056]
 gi|332852399|ref|ZP_08434168.1| hypothetical protein HMPREF0021_01743 [Acinetobacter baumannii
           6013150]
 gi|332870980|ref|ZP_08439593.1| hypothetical protein HMPREF0020_03246 [Acinetobacter baumannii
           6013113]
 gi|169149820|emb|CAM87711.1| conserved hypothetical protein from bacteriophage [Acinetobacter
           baumannii AYE]
 gi|213055866|gb|ACJ40768.1| conserved hypothetical protein [Acinetobacter baumannii AB0057]
 gi|323517049|gb|ADX91430.1| hypothetical protein ABTW07_0994 [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332729243|gb|EGJ60585.1| hypothetical protein HMPREF0021_01743 [Acinetobacter baumannii
           6013150]
 gi|332731740|gb|EGJ63020.1| hypothetical protein HMPREF0020_03246 [Acinetobacter baumannii
           6013113]
          Length = 442

 Score = 95.8 bits (236), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 68/239 (28%), Gaps = 37/239 (15%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDY-----GQRNKVELECRLCVRKKIVELMP 65
           ++ LFSGG DS+        +  +   +S  Y      Q +          R +++    
Sbjct: 150 SVCLFSGGLDSTIGAIDLKAQGKKSVLVSHAYPKDRQKQDHVYYDLQFDNARFQVLANPR 209

Query: 66  KW----KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           K      D             G +  ++L+KN                   II L     
Sbjct: 210 KVKEIPADVQMRTRSFNFIAFGALIATALSKN--------------HFSNKIIKLYIPEN 255

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
               +              +      H         +   +   V +  P  +  K E  
Sbjct: 256 GLISIN----PPLTPRRIGALSTRTTHPYFLQKLNILFKNIGLPVEIENPYQYKTKGE-- 309

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
            +  +   Q  +  I   + +C      K    G  C  C  C +R+  + ++  +Y+D
Sbjct: 310 -MMLECKDQSSLKKIAATTVSC-----GKWKRSGMQCGKCLPCLIRRASFDKY--QYKD 360


>gi|323341681|ref|ZP_08081914.1| thiamine biosynthesis protein ThiI [Erysipelothrix rhusiopathiae
           ATCC 19414]
 gi|322464106|gb|EFY09299.1| thiamine biosynthesis protein ThiI [Erysipelothrix rhusiopathiae
           ATCC 19414]
          Length = 409

 Score = 95.4 bits (235), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 61/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +++ SGG DS       + R  R+E + F                +KK+++L  +  +
Sbjct: 189 KVMVMLSGGIDSPVAAYLMMKRGVRIEAIHF------ASPPYTSDEAQKKVMDLAQQLTN 242

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 I  +             +V ++I      +  +       L  A  LA+R    
Sbjct: 243 YQDHIRINVVPF----------TDVQLEIYKKVPESYAITMMRRFMLRIAERLAFRRNCL 292

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + + +   +     + +  PL+   K E   LA+ I  
Sbjct: 293 AIANGESLGQVAS---------QTLHSMKEITNIGTLPILRPLITYDKVEIIDLARKIDT 343

Query: 190 QDLVNLILEE 199
            +   L  E+
Sbjct: 344 YETSILPFED 353


>gi|301513564|ref|ZP_07238801.1| hypothetical protein AbauAB05_18334 [Acinetobacter baumannii AB058]
          Length = 365

 Score = 95.4 bits (235), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 68/239 (28%), Gaps = 37/239 (15%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDY-----GQRNKVELECRLCVRKKIVELMP 65
           ++ LFSGG DS+        +  +   +S  Y      Q +          R +++    
Sbjct: 147 SVCLFSGGLDSTIGAIDLKAQGKKSVLVSHAYPKDRQKQDHVYYDLQFDNARFQVLANPR 206

Query: 66  KW----KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           K      D             G +  ++L+KN                   II L     
Sbjct: 207 KVKEIPADVQMRTRSFNFIAFGALIATALSKN--------------HFSNKIIKLYIPEN 252

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
               +              +      H         +   +   V +  P  +  K E  
Sbjct: 253 GLISIN----PPLTPRRIGALSTRTTHPYFLQKLNILFKNIGLPVEIENPYQYKTKGE-- 306

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
            +  +   Q  +  I   + +C      K    G  C  C  C +R+  + ++  +Y+D
Sbjct: 307 -MMLECKDQSSLKKIAATTVSC-----GKWKRSGMQCGKCLPCLIRRASFDKY--QYKD 357


>gi|229087209|ref|ZP_04219356.1| thiamine biosynthesis protein thiI [Bacillus cereus Rock3-44]
 gi|228696090|gb|EEL48928.1| thiamine biosynthesis protein thiI [Bacillus cereus Rock3-44]
          Length = 403

 Score = 95.4 bits (235), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 55/190 (28%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L  +   
Sbjct: 180 KVMVLLSGGIDSPVAAFLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTK 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              V   I      +  +     + +     +A      
Sbjct: 234 YCKRLTLHLVPF----------TEVQKTINKEIPSSYSMTVMRRMMMRITERIAEERNAL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             V  PL+ + K E  K+A +IG 
Sbjct: 284 AITTGESLGQVASQTLDSMHTINEVTNY---------PVIRPLITMDKLEIIKIANEIGT 334

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 335 YDISIRPYED 344


>gi|75760755|ref|ZP_00740776.1| Thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|218899802|ref|YP_002448213.1| thiamine biosynthesis protein ThiI [Bacillus cereus G9842]
 gi|228903166|ref|ZP_04067300.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis IBL
           4222]
 gi|228910473|ref|ZP_04074288.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis IBL 200]
 gi|226703940|sp|B7IK47|THII_BACC2 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|74491755|gb|EAO54950.1| Thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|218545007|gb|ACK97401.1| thiamine biosynthesis protein ThiI [Bacillus cereus G9842]
 gi|228849239|gb|EEM94078.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis IBL 200]
 gi|228856448|gb|EEN00974.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis IBL
           4222]
          Length = 404

 Score = 95.4 bits (235), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 55/190 (28%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L      
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQGLTK 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              V   I      +  +     + +     +A      
Sbjct: 234 YCKRVTLHLVPF----------TEVQKTINKEIPSSYSMTVMRRMMMRITEQIAEERNAL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             V  PL+ + K E  K+A++IG 
Sbjct: 284 AITTGESLGQVASQTLDSMHTINEVTNY---------PVIRPLITMDKLEIIKIAEEIGT 334

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 335 YDISIRPYED 344


>gi|160880433|ref|YP_001559401.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           phytofermentans ISDg]
 gi|189030624|sp|A9KKT0|THII_CLOPH RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|160429099|gb|ABX42662.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           phytofermentans ISDg]
          Length = 391

 Score = 95.4 bits (235), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 58/190 (30%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+LL SGG DS         R   +E   F                ++K+V+L      
Sbjct: 180 KAMLLLSGGIDSPVAGYMISKRGVTIEATYFH------APPYTSERAKQKVVDLAKIISA 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G   +  +             ++ + I +               +  A ++A R    
Sbjct: 234 YTGPIKLHVVNF----------TDIQLYIYEKCPHEELTIIMRRYMMKIAESIANRSKCL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++ G      +           A+           + V+ PL+ + K E   +++ IG 
Sbjct: 284 GLITGESIGQVASQTMQSLAATNAV---------CTMPVYRPLIGMDKQEIIDISERIGT 334

Query: 190 QDLVNLILEE 199
            +   L  E+
Sbjct: 335 FETSVLPFED 344


>gi|229135484|ref|ZP_04264271.1| thiamine biosynthesis protein thiI [Bacillus cereus BDRD-ST196]
 gi|228648045|gb|EEL04093.1| thiamine biosynthesis protein thiI [Bacillus cereus BDRD-ST196]
          Length = 404

 Score = 95.4 bits (235), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 56/190 (29%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L  +   
Sbjct: 180 KVMVLLSGGIDSPVATYLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTQ 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              V   I      +  +     + +     +A      
Sbjct: 234 YCKRVTLHLVPF----------TEVQKTINKEIPSSYSMTVMRRMMMRITERIAEERNAL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             V  PL+ + K E  K+A++IG 
Sbjct: 284 AITTGESLGQVASQTLDSMHTINEVTNY---------PVIRPLITMDKLEIIKIAKEIGT 334

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 335 YDISIRPYED 344


>gi|163942380|ref|YP_001647264.1| thiamine biosynthesis protein ThiI [Bacillus weihenstephanensis
           KBAB4]
 gi|163864577|gb|ABY45636.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
           weihenstephanensis KBAB4]
          Length = 403

 Score = 95.4 bits (235), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 56/190 (29%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L  +   
Sbjct: 179 KVMVLLSGGIDSPVATYLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTQ 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              V   I      +  +     + +     +A      
Sbjct: 233 YCKRVTLHLVPF----------TEVQKTINKEIPSSYSMTVMRRMMMRITERIAEERNAL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             V  PL+ + K E  K+A++IG 
Sbjct: 283 AITTGESLGQVASQTLDSMHTINEVTNY---------PVIRPLITMDKLEIIKIAKEIGT 333

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 334 YDISIRPYED 343


>gi|229013852|ref|ZP_04170980.1| thiamine biosynthesis protein thiI [Bacillus mycoides DSM 2048]
 gi|228747521|gb|EEL97396.1| thiamine biosynthesis protein thiI [Bacillus mycoides DSM 2048]
          Length = 404

 Score = 95.4 bits (235), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 56/190 (29%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L  +   
Sbjct: 180 KVMVLLSGGIDSPVATYLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTK 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              V   I      +  +     + +     +A      
Sbjct: 234 YCKRVTLHLVPF----------TEVQKTINKEIPSSYSMTVMRRMMMRITERIAEERNAL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             V  PL+ + K E  K+A++IG 
Sbjct: 284 AITTGESLGQVASQTLDSMHTINEVTNY---------PVIRPLITMDKLEIIKIAKEIGT 334

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 335 YDISIRPYED 344


>gi|229062333|ref|ZP_04199652.1| thiamine biosynthesis protein thiI [Bacillus cereus AH603]
 gi|228716965|gb|EEL68648.1| thiamine biosynthesis protein thiI [Bacillus cereus AH603]
          Length = 404

 Score = 95.4 bits (235), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 56/190 (29%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L  +   
Sbjct: 180 KVMVLLSGGIDSPVATYLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTK 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              V   I      +  +     + +     +A      
Sbjct: 234 YCKRVTLHLVPF----------TEVQKTINKEIPSSYSMTVMRRMMMRITERIAEERNAL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             V  PL+ + K E  K+A++IG 
Sbjct: 284 AITTGESLGQVASQTLDSMHTINEVTNY---------PVIRPLITMDKLEIIKIAKEIGT 334

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 335 YDISIRPYED 344


>gi|229169374|ref|ZP_04297084.1| thiamine biosynthesis protein thiI [Bacillus cereus AH621]
 gi|228614137|gb|EEK71252.1| thiamine biosynthesis protein thiI [Bacillus cereus AH621]
          Length = 404

 Score = 95.4 bits (235), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 56/190 (29%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L  +   
Sbjct: 180 KVMVLLSGGIDSPVATYLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTK 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              V   I      +  +     + +     +A      
Sbjct: 234 YCKRVTLHLVPF----------TEVQKTINKEIPSSYSMTVMRRMMMRITERIAEERNAL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             V  PL+ + K E  K+A++IG 
Sbjct: 284 AITTGESLGQVASQTLDSMHTINEVTNY---------PVIRPLITMDKLEIIKIAKEIGT 334

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 335 YDISIRPYED 344


>gi|315652515|ref|ZP_07905499.1| thiamine biosynthesis protein ThiI [Eubacterium saburreum DSM 3986]
 gi|315485231|gb|EFU75629.1| thiamine biosynthesis protein ThiI [Eubacterium saburreum DSM 3986]
          Length = 394

 Score = 95.4 bits (235), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 61/192 (31%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R  RVE + F                ++K++EL    
Sbjct: 180 NGRAMLLLSGGIDSPVAGYMIAKRGVRVEAVYFH------APPYTSERAKRKVIELAQLV 233

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G  ++  +             ++ + I +N   +          +  A  +A   G
Sbjct: 234 AMYNGPLNLHIINF----------TDIQLAIYENCPHDELTIIMRRYMMKIAERIAVENG 283

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +        +  A  T         + V  PL+   K E  ++++ I
Sbjct: 284 DQALITGESIGQVASQTIQSLFSTDAAAT---------LPVFRPLIGFDKQEIVEISEKI 334

Query: 188 GGQDLVNLILEE 199
           G  +      E+
Sbjct: 335 GTYETSIQPYED 346


>gi|229175358|ref|ZP_04302873.1| thiamine biosynthesis protein thiI [Bacillus cereus MM3]
 gi|228608190|gb|EEK65497.1| thiamine biosynthesis protein thiI [Bacillus cereus MM3]
          Length = 404

 Score = 95.0 bits (234), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 56/190 (29%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L  +   
Sbjct: 180 KVMVLLSGGIDSPVATYLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTK 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              V   I      +  +     + +     +A      
Sbjct: 234 YCKRVTLHLVPF----------TEVQKTINKEIPSSYSMTVMRRMMMRITERIAEERNAL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             V  PL+ + K E  K+A++IG 
Sbjct: 284 AITTGESLGQVASQTLDSMHTINEVTNY---------PVIRPLITMDKLEIIKIAEEIGT 334

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 335 YDISIRPYED 344


>gi|289548645|ref|YP_003473633.1| Queuosine synthesis-like protein [Thermocrinis albus DSM 14484]
 gi|289182262|gb|ADC89506.1| Queuosine synthesis-like protein [Thermocrinis albus DSM 14484]
          Length = 196

 Score = 95.0 bits (234), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 69/223 (30%), Gaps = 31/223 (13%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++LFSGG +SST L   L     V  +    G          L   KK+     +  
Sbjct: 2   KKVVVLFSGGVESSTLLYLKLKEGVCVYPVYVREGM---SWEHAELFWAKKVWHHFKESY 58

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +L    +                              F+P RN+      AT A R   
Sbjct: 59  TNLMPLCV-----------------CRGNGVPPRKGELFIPLRNLRLAASVATYALRRKA 101

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I   +       +PD     ++ +E  +++G    + +  PL  + K    +L     
Sbjct: 102 YEI--NIGSLGAYPFPDNNLPYLKEVEKLLSVGSGQDIKLEAPLFGMDKRRIVELY---- 155

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
                ++ L  + +C    R       + C  C  C  R++  
Sbjct: 156 ---GPHVPLHLTFSCIKPIRKGNKF--FHCGKCVKCLEREEAL 193


>gi|154482581|ref|ZP_02025029.1| hypothetical protein EUBVEN_00248 [Eubacterium ventriosum ATCC
           27560]
 gi|149736606|gb|EDM52492.1| hypothetical protein EUBVEN_00248 [Eubacterium ventriosum ATCC
           27560]
          Length = 392

 Score = 95.0 bits (234), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 56/190 (29%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+LL SGG DS         R   V+ + F                ++K+V+L      
Sbjct: 181 KAMLLLSGGIDSPVAGWMTAKRGVVVDAVYFH------APPYTSERAKQKVVDLAKLVSK 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G   +  +              + M I D    +          +  A   A +    
Sbjct: 235 YSGPMRLYVVNF----------TEIQMYIYDKCPHDELTIIMRRYMMKIAEYFANKEKAQ 284

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      +          + +++         + V  P++   K E   ++  IG 
Sbjct: 285 GLVTGESIGQVAS---------QTMQSLAATNEVCTMPVFRPVIAFDKQEIVDISLKIGT 335

Query: 190 QDLVNLILEE 199
            +   L  E+
Sbjct: 336 YETSILPYED 345


>gi|312135343|ref|YP_004002681.1| thiamine biosynthesis/tRNA modification protein thii
           [Caldicellulosiruptor owensensis OL]
 gi|311775394|gb|ADQ04881.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Caldicellulosiruptor owensensis OL]
          Length = 392

 Score = 95.0 bits (234), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 59/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A LL SGG DS         R   +E + F                ++K+++L      
Sbjct: 181 RAHLLLSGGIDSPVAGFMIAKRGVEIEAIHFY------SFPYTGEKAKEKVIDLCKVLAK 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              +  +  +              + + I +N              +  A  +A + G  
Sbjct: 235 YTDKIKLYIVPF----------TEIQLSIYENCDERYLTIIMRRFMMRIAQKIAMQNGGL 284

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++ G      +          +A            + V  PL+ + K E  KLA+ IG 
Sbjct: 285 ALITGESIGQVASQTMESLFCTQAA---------VSMPVFRPLIGMDKEEIIKLAKRIGT 335

Query: 190 QDLVNLILEE 199
            D+  L  E+
Sbjct: 336 YDISILPYED 345


>gi|241760123|ref|ZP_04758221.1| conserved hypothetical protein [Neisseria flavescens SK114]
 gi|241319577|gb|EER56007.1| conserved hypothetical protein [Neisseria flavescens SK114]
          Length = 438

 Score = 95.0 bits (234), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 27/230 (11%), Positives = 65/230 (28%), Gaps = 14/230 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +    + LFSGG DSS      L++      +S  Y    K +   +  + +++ +    
Sbjct: 145 RNKDCVCLFSGGLDSSIGAIDLLEQGHSPVLVSHSY----KGDKSRQQAIIQQLNQNGYI 200

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            + S      +    L +   + +T              +    +  +       +    
Sbjct: 201 NQFSQFNA--IAQPHLNNGRATEITMRTRSLNFLAFAIISAYALQEFVQEEIDVFVPENG 258

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I+           +      H         +   +    T+  P  +  K +     ++
Sbjct: 259 VISINAPLTVRRVGALSTRTTHPYFIQEIQRLFTAVNIPFTLRNPYQFKTKGQMIAECEN 318

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           +    L+  I+ ++ +C              C  C  C +R+        
Sbjct: 319 L---PLLQQIIPDTVSC-----SHWKRKNQQCGVCVPCLIRRASLHYAGI 360


>gi|308069907|ref|YP_003871512.1| thiamine biosynthesis protein thiI [Paenibacillus polymyxa E681]
 gi|305859186|gb|ADM70974.1| Probable thiamine biosynthesis protein thiI [Paenibacillus polymyxa
           E681]
          Length = 408

 Score = 95.0 bits (234), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 62/192 (32%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS      ++ R   +E + F                ++K++EL    
Sbjct: 178 NGKAILLLSGGIDSPVAGWSSMRRGLEIECVHFY------SYPFTSERAKEKVIELAKVL 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   I  +              V          N  +       L  A  LA R G
Sbjct: 232 AGYAGRIKIHLVPF----------TEVQTAFTRTGQDNLIITLMRRSMLRIATMLAEREG 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +       +          +G  + + +  PL+ + K E  ++A+ I
Sbjct: 282 ALALVTGDSLGQVASQTLSSMN---------VIGRSTELPLLRPLVMMDKQEITEIAKQI 332

Query: 188 GGQDLVNLILEE 199
           G  DL  L  E+
Sbjct: 333 GTYDLSILPYED 344


>gi|332652557|ref|ZP_08418302.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Ruminococcaceae bacterium D16]
 gi|332517703|gb|EGJ47306.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Ruminococcaceae bacterium D16]
          Length = 390

 Score = 95.0 bits (234), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 62/192 (32%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+ L SGG DS         R   +E + F                ++K++EL    
Sbjct: 178 NGRAVSLLSGGIDSPVASWMIAKRGVALEMVHFF------SYPYTSPEAKEKVLELAKLL 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +              +  +++ +     F        +  +  +A R G
Sbjct: 232 TPYTGRLTVHVVPF----------TAIQEELRRSCPEELFTVIMRRFMMRISEAVAKRCG 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G C    +          + ++  +  G    + +  P + + K E  ++A+ I
Sbjct: 282 AKALVTGECLGQVAS---------QTMDAMMVTGSVVDLPILRPCVGMDKEEIVQIARKI 332

Query: 188 GGQDLVNLILEE 199
           G  +   L  E+
Sbjct: 333 GTFETSILPYED 344


>gi|229198807|ref|ZP_04325502.1| thiamine biosynthesis protein thiI [Bacillus cereus m1293]
 gi|228584680|gb|EEK42803.1| thiamine biosynthesis protein thiI [Bacillus cereus m1293]
          Length = 223

 Score = 95.0 bits (234), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 56/188 (29%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++L SGG DS       + R   VE + F                ++K+++L  +     
Sbjct: 1   MVLLSGGIDSPVAAYLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTKYC 54

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
               +  +              V   I      +  +     + +     +A       I
Sbjct: 55  KRVTLHLVPF----------TEVQKTINKEIPSSYSMTVMRRMMMRITERIAEERNALAI 104

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
             G      +        TI  +             +  PL+ + K E  K+A++IG  D
Sbjct: 105 TTGESLGQVASQTLDSMHTINEVTNY---------PIIRPLITMDKLEIIKIAEEIGTYD 155

Query: 192 LVNLILEE 199
           +     E+
Sbjct: 156 ISIRPYED 163


>gi|313500748|gb|ADR62114.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
          Length = 422

 Score = 95.0 bits (234), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 30/230 (13%), Positives = 65/230 (28%), Gaps = 21/230 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +  +  +++L SGG DS       +++  +   +S    Q  + + E +    K +    
Sbjct: 132 LHPSEDSVVLLSGGLDSLIGAIDLVEQGVKPYAVS----QIVRGDGEKQDRFAKSLG--- 184

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
               + LG +H+       + S  + +                      + L        
Sbjct: 185 ---LERLGLNHVTKSPGQQEPSQRARSIIFLAFGLAVGTSLDRYHRGQTVPLYICENGFI 241

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            +              S      H         I      +V +  P   + K E     
Sbjct: 242 AIN----PPLTMSRLGSLSTRTAHPEYLGRLQQILDAAGINVQIRNPYALMTKGEMLAAC 297

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           +    Q+L+      S +C       +      C  C  C +R+  + ++
Sbjct: 298 R---NQELLKEHAVASTSC----GRFQRFGYKHCGRCVPCQVRRASFKQW 340


>gi|317054842|ref|YP_004103309.1| thiamine biosynthesis/tRNA modification protein ThiI [Ruminococcus
           albus 7]
 gi|315447111|gb|ADU20675.1| thiamine biosynthesis/tRNA modification protein ThiI [Ruminococcus
           albus 7]
          Length = 392

 Score = 95.0 bits (234), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 55/192 (28%), Gaps = 24/192 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+LL SGG DS         R   VE + F      +         R K+  L    
Sbjct: 178 SGRAMLLLSGGIDSPVAGYMMARRGAVVEAIHF------EAPPYTSDRARMKVETLAKLM 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+     +           T+   +   +       +  R ++  +          
Sbjct: 232 TAYCGDVKFFCVPF---------TEIQELLRDNCPEELFTILMRRLMMEIAQRICEKDGD 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +V G      +           A            + V  P + + K E  ++A+ I
Sbjct: 283 IQALVTGESLGQVASQTMYAMVCTDAACR---------MPVFRPCIGMDKSEIVEIARKI 333

Query: 188 GGQDLVNLILEE 199
           G  +   L  E+
Sbjct: 334 GTFETSILPYED 345


>gi|167035804|ref|YP_001671035.1| hypothetical protein PputGB1_4813 [Pseudomonas putida GB-1]
 gi|166862292|gb|ABZ00700.1| conserved hypothetical protein [Pseudomonas putida GB-1]
          Length = 422

 Score = 94.6 bits (233), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 30/230 (13%), Positives = 65/230 (28%), Gaps = 21/230 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +  +  +++L SGG DS       +++  +   +S    Q  + + E +    K +    
Sbjct: 132 LHPSEDSVVLLSGGLDSLIGAIDLVEQGVKPYAVS----QIVRGDGEKQDRFAKSLG--- 184

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
               + LG +H+       + S  + +                      + L        
Sbjct: 185 ---LERLGLNHVTKSPGQQEPSQRARSIIFLAFGLAVGTSLDRYHRGQTVPLYICENGFI 241

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            +              S      H         I      +V +  P   + K E     
Sbjct: 242 AIN----PPLTMSRLGSLSTRTAHPEYLGRLQKILDAAGINVQIRNPYALMTKGEMLAAC 297

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           +    Q+L+      S +C       +      C  C  C +R+  + ++
Sbjct: 298 R---NQELLKEHAVASTSC----GRFQRFGYKHCGRCVPCQVRRASFKQW 340


>gi|229026102|ref|ZP_04182481.1| thiamine biosynthesis protein thiI [Bacillus cereus AH1272]
 gi|228735204|gb|EEL85820.1| thiamine biosynthesis protein thiI [Bacillus cereus AH1272]
          Length = 404

 Score = 94.6 bits (233), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 55/190 (28%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L  +   
Sbjct: 180 KVMVLLSGGIDSPVATYLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTK 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              V   I      +  +     + +     +A      
Sbjct: 234 YCKRVTLHLVPF----------TEVQKTINKEIPSSYSMTVMRRMMMRITERIAEERNAL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             V  PL+ + K E  K+A +IG 
Sbjct: 284 AITTGESLGQVASQTLDSMHTINEVTNY---------PVIRPLITMDKLEIIKIANEIGT 334

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 335 YDISIRPYED 344


>gi|229019875|ref|ZP_04176675.1| thiamine biosynthesis protein thiI [Bacillus cereus AH1273]
 gi|228741428|gb|EEL91628.1| thiamine biosynthesis protein thiI [Bacillus cereus AH1273]
          Length = 242

 Score = 94.6 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 55/190 (28%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L  +   
Sbjct: 18  KVMVLLSGGIDSPVATYLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTK 71

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              V   I      +  +     + +     +A      
Sbjct: 72  YCKRVTLHLVPF----------TEVQKTINKEIPSSYSMTVMRRMMMRITERIAEERNAL 121

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             V  PL+ + K E  K+A +IG 
Sbjct: 122 AITTGESLGQVASQTLDSMHTINEVTNY---------PVIRPLITMDKLEIIKIANEIGT 172

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 173 YDISIRPYED 182


>gi|261405633|ref|YP_003241874.1| thiamine biosynthesis/tRNA modification protein ThiI [Paenibacillus
           sp. Y412MC10]
 gi|261282096|gb|ACX64067.1| thiamine biosynthesis/tRNA modification protein ThiI [Paenibacillus
           sp. Y412MC10]
          Length = 412

 Score = 94.6 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 64/192 (33%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS      A+ R   +E + F                ++K++EL    
Sbjct: 178 NGKAMLLLSGGIDSPVAGWSAMRRGLEIECVHFY------SFPYTSQLAKEKVMELTRLL 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  +             +V          N  +       L  A++LA R G
Sbjct: 232 SGYTGKIKLHLVPF----------TDVQTSFVGIGQDNLIITFMRRAMLRIASSLAEREG 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +       +          +G  + + +  PL+ + K +   +A DI
Sbjct: 282 ALAIVTGDSLGQVASQTLPSMN---------VIGRATELPLLRPLVMMDKNDIINIAMDI 332

Query: 188 GGQDLVNLILEE 199
           G  D   L  E+
Sbjct: 333 GTFDTSILPYED 344


>gi|300214745|gb|ADJ79161.1| Probable thiamine biosynthesis protein thiI [Lactobacillus
           salivarius CECT 5713]
          Length = 405

 Score = 94.6 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 63/190 (33%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+L+ SGG DS      A+ R   +E + F                  K  +L  K   
Sbjct: 179 KAMLMLSGGIDSPVAGYLAMKRGVDIEMVHFF------SPPYTSEQALNKAKDLTAKLTP 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G+   + +              +   +++       +  +    L     +A R    
Sbjct: 233 YVGKIRFIQVPF----------TEIQETVKEKVPSGYLMTIQRRFMLRLTEAIAQRRKGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+   +   + + +  P++ + K E  K+AQDI  
Sbjct: 283 AIFNGEALGQVAS---------QTLESMAAINDVTTMPILRPVVSMDKNEIIKIAQDIDT 333

Query: 190 QDLVNLILEE 199
            DL  +  E+
Sbjct: 334 FDLSIMPFED 343


>gi|90962048|ref|YP_535964.1| thiamine biosynthesis protein [Lactobacillus salivarius UCC118]
 gi|227891067|ref|ZP_04008872.1| thiamine biosynthesis protein [Lactobacillus salivarius ATCC 11741]
 gi|301300909|ref|ZP_07207081.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           salivarius ACS-116-V-Col5a]
 gi|122448846|sp|Q1WT71|THII_LACS1 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|90821242|gb|ABD99881.1| Thiamine biosynthesis protein [Lactobacillus salivarius UCC118]
 gi|227867156|gb|EEJ74577.1| thiamine biosynthesis protein [Lactobacillus salivarius ATCC 11741]
 gi|300851508|gb|EFK79220.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           salivarius ACS-116-V-Col5a]
          Length = 405

 Score = 94.6 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 63/190 (33%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+L+ SGG DS      A+ R   +E + F                  K  +L  K   
Sbjct: 179 KAMLMLSGGIDSPVAGYLAMKRGVDIEMVHFF------SPPYTSEQALNKAKDLTAKLTP 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G+   + +              +   +++       +  +    L     +A R    
Sbjct: 233 YVGKIRFIQVPF----------TEIQETVKEKVPSGYLMTIQRRFMLRLTEAIAQRRKGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+   +   + + +  P++ + K E  K+AQDI  
Sbjct: 283 AIFNGEALGQVAS---------QTLESMAAINDVTTMPILRPVVSMDKNEIIKIAQDIDT 333

Query: 190 QDLVNLILEE 199
            DL  +  E+
Sbjct: 334 FDLSIMPFED 343


>gi|152977014|ref|YP_001376531.1| thiamine biosynthesis protein ThiI [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|189030620|sp|A7GTS8|THII_BACCN RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|152025766|gb|ABS23536.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
           cytotoxicus NVH 391-98]
          Length = 403

 Score = 94.6 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 55/190 (28%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L  +   
Sbjct: 180 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTK 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              V   I      +  +     + +     +A      
Sbjct: 234 YCKRVTLHLVPF----------TEVQKTINKEIPSSYTMTVMRRMMMRITERIAEERNAL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             V  PL+ + K E  K+A +IG 
Sbjct: 284 AITTGESLGQVASQTLDSMHTINEVTNY---------PVLRPLITMDKLEIIKIANEIGT 334

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 335 YDISIRPYED 344


>gi|283781954|ref|YP_003372709.1| ExsB family protein [Pirellula staleyi DSM 6068]
 gi|283440407|gb|ADB18849.1| ExsB family protein [Pirellula staleyi DSM 6068]
          Length = 236

 Score = 94.6 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 51/230 (22%), Positives = 78/230 (33%), Gaps = 25/230 (10%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +L SGG DSS  +   L     V  +    G   +      +        L      +L 
Sbjct: 12  VLMSGGLDSSILVGKFLREGRTVHPIYIRTGLFWQSGELPAVQAF-----LAAIATANLR 66

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
              IL L +    +             D      ++PGRN + LV AA      GI  + 
Sbjct: 67  PLKILELPLDDLYTDHWSLTGSGTPADDTPDEAVYLPGRNALLLVKAAVYCQLHGIGQLA 126

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
                +  S + D   +     ++A+N G  S V +  P   L K E  +L         
Sbjct: 127 CAPLGS--SPFEDASSEFFTEYQSAMNRGSSSPVVLLRPFGELHKEEVMRLG-------- 176

Query: 193 VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM----EFKEKY 238
           V L LE + +C           G  C +C  C+ R++ +     E K  Y
Sbjct: 177 VGLPLELTFSCIHPVD------GTHCGTCNKCFERKEAFRITGIEDKTVY 220


>gi|150389974|ref|YP_001320023.1| thiamine biosynthesis/tRNA modification protein ThiI [Alkaliphilus
           metalliredigens QYMF]
 gi|189030616|sp|A6TQ96|THII_ALKMQ RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|149949836|gb|ABR48364.1| thiamine biosynthesis/tRNA modification protein ThiI [Alkaliphilus
           metalliredigens QYMF]
          Length = 392

 Score = 94.6 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 57/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              ALLL SGG DS         R   +  + F                ++K+V+L    
Sbjct: 177 NGKALLLLSGGIDSPVAGWLVAKRGVEIHGMHFH------SYPFTSERAKEKVVDLAKIL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  + +L           +  +I +               +  A  +A ++G
Sbjct: 231 TTYCGRIKLYSVNLLA----------IQKEINEKCPEEEMTILSRRFMMKIAERVANKIG 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +           A            + V  PL+ + K +   LA+ I
Sbjct: 281 CDALVTGESIGQVASQTVKGLHVTNAAVE---------LPVFRPLIAMDKVDIMDLARKI 331

Query: 188 GGQDLVNLILEE 199
              +   L  E+
Sbjct: 332 DTYETSILPFED 343


>gi|149181098|ref|ZP_01859598.1| thiamine biosynthesis [Bacillus sp. SG-1]
 gi|148851185|gb|EDL65335.1| thiamine biosynthesis [Bacillus sp. SG-1]
          Length = 403

 Score = 94.6 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 61/192 (31%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS       + R   VE + F                ++K+++L    
Sbjct: 177 SGKAMLMLSGGLDSPVAGYLIMKRGVEVEAVHFH------SPPFTSERAKQKVIDLAKSL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +              +   + +    N  +     + L     L  +  
Sbjct: 231 SAFSGRIKLHVVPF----------TEIQQTVHNQVPENYTMTSTRRMMLRITEKLRQKHE 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +                + +   ++  V  PL+ + K E   +A++I
Sbjct: 281 GLGIVTGESLGQVASQTLDSM---------LAINEVTNTPVLRPLISVDKLEIIDIAKEI 331

Query: 188 GGQDLVNLILEE 199
           G  D+  L  E+
Sbjct: 332 GTHDISILPYED 343


>gi|160932368|ref|ZP_02079759.1| hypothetical protein CLOLEP_01204 [Clostridium leptum DSM 753]
 gi|156868970|gb|EDO62342.1| hypothetical protein CLOLEP_01204 [Clostridium leptum DSM 753]
          Length = 394

 Score = 94.6 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 57/190 (30%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A +L SGG DS         R   +  + F                 +K+ EL+ +  +
Sbjct: 181 KAAVLISGGIDSPVAAWMMAKRGVELTAVHF------ASPPYTSERAEEKVKELLARVSE 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G   +  +              +   IQ       F      + +  A+ +  R G  
Sbjct: 235 YSGRMRLFTVPF----------TKIQETIQARCPEELFTIIMRRMMIKIASHIGMREGCA 284

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++ G      +           A          + + V  PL+ + K E  ++++ I  
Sbjct: 285 ALITGESLGQVASQTIHAIACTDAA---------AGLPVFRPLIGMDKEEIVRISRKIEA 335

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 336 FDISIQPYED 345


>gi|315645999|ref|ZP_07899120.1| thiamine biosynthesis/tRNA modification protein ThiI [Paenibacillus
           vortex V453]
 gi|315278760|gb|EFU42074.1| thiamine biosynthesis/tRNA modification protein ThiI [Paenibacillus
           vortex V453]
          Length = 412

 Score = 94.6 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 64/192 (33%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS      A+ R   +E + F                ++K++EL    
Sbjct: 178 NGKAMLLLSGGIDSPVAGWSAMRRGLEIECVHFY------SFPYTSQLAKEKVMELTRLL 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  +             +V          N  +       L  A++LA R G
Sbjct: 232 SGYTGKIKLHLVPF----------TDVQTSFVGIGQDNLIITFMRRAMLRIASSLAEREG 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +       +          +G  + + +  PL+ + K +   +A DI
Sbjct: 282 ALAIVTGDSLGQVASQTLPSMN---------VIGRATELPLLRPLVMMDKNDIINIAMDI 332

Query: 188 GGQDLVNLILEE 199
           G  +   L  E+
Sbjct: 333 GTFETSILPYED 344


>gi|163816748|ref|ZP_02208111.1| hypothetical protein COPEUT_02938 [Coprococcus eutactus ATCC 27759]
 gi|158448005|gb|EDP25000.1| hypothetical protein COPEUT_02938 [Coprococcus eutactus ATCC 27759]
          Length = 395

 Score = 94.2 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 56/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               + L SGG DS         R   VE + F                ++K+++L    
Sbjct: 179 NGKGMALLSGGIDSPVAAYMIAKRGVVVEAVYFH------APPFTSERAKQKVIDLACLV 232

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D  G   +  +             +V M I DN              +  A  LA +  
Sbjct: 233 ADYAGAIKLHVVNFA----------DVQMAIYDNCPHEELTIIMKRYMIKIAEELAEKND 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
               + G      S       +          +   S + V  P + + K E   +++ I
Sbjct: 283 CQCTITGESIGQVSSQTVFSLN---------VINQVSTMPVFRPCIGMDKQEIVDISEKI 333

Query: 188 GGQDLVNLILEE 199
           G  +   L  E+
Sbjct: 334 GTYETSILPYED 345


>gi|56965845|ref|YP_177579.1| hypothetical protein ABC4087 [Bacillus clausii KSM-K16]
 gi|56912091|dbj|BAD66618.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
          Length = 430

 Score = 94.2 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/239 (14%), Positives = 67/239 (28%), Gaps = 23/239 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWK 68
             + +FSGG DS       LD     +TL    YG              K I E     +
Sbjct: 145 KKVCMFSGGLDSFIGAIELLDDTSENDTLFVSHYGGG------------KGIKEYQDILR 192

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKI-QDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           + L   + L  +       S+          +     +  V   + +       +     
Sbjct: 193 EELISKYQLTESNFYSFYASAKNGVEDTTRTRSFMFFSHAVVLASSVDRPVNLVIPENGL 252

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I+  +        S      H    ++   +   ++  V +  P  +  K E  +    I
Sbjct: 253 ISLNIPLTNSRLGSSSTRTTHPFYLSLFQKLLDNLKIMVKILNPYQFKTKGEMIRECSSI 312

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGY--GCNSCPACYLRQKGWMEFKEK----YQD 240
              + +   +  + +C      +         C  C  C +R+        +    Y+D
Sbjct: 313 ---EFLQKNITNTMSCSHPDWGRWAGESEVCHCGYCLPCVIRRSAIKNAGIQDETIYRD 368


>gi|301598005|ref|ZP_07243013.1| hypothetical protein AbauAB059_19368 [Acinetobacter baumannii
           AB059]
          Length = 321

 Score = 94.2 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 68/239 (28%), Gaps = 37/239 (15%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDY-----GQRNKVELECRLCVRKKIVELMP 65
           ++ LFSGG DS+        +  +   +S  Y      Q +          R +++    
Sbjct: 44  SVCLFSGGLDSTIGAIDLKAQGKKSVLVSHAYPKDRQKQDHVYYDLQFDNARFQVLANPR 103

Query: 66  KW----KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           K      D             G +  ++L+KN                   II L     
Sbjct: 104 KVKEIPADVQMRTRSFNFIAFGALIATALSKN--------------HFSNKIIKLYIPEN 149

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
               +              +      H         +   +   V +  P  +  K E  
Sbjct: 150 GLISIN----PPLTPRRIGALSTRTTHPYFLQKLNILFKNIGLPVEIENPYQYKTKGE-- 203

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
            +  +   Q  +  I   + +C      K    G  C  C  C +R+  + ++  +Y+D
Sbjct: 204 -MMLECKDQSSLKKIAATTVSC-----GKWKRSGMQCGKCLPCLIRRASFDKY--QYKD 254


>gi|11498485|ref|NP_069713.1| hypothetical protein AF0879 [Archaeoglobus fulgidus DSM 4304]
 gi|3915121|sp|O29382|THII_ARCFU RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|2649723|gb|AAB90361.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 374

 Score = 94.2 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 65/190 (34%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L SGG DS      A+ R   V  + F     +         VR+KI  L  K  +
Sbjct: 167 KVVALISGGIDSPVAAFMAMKRGCEVVAVHFFNQTMH------SPKVREKIRMLAEKLAE 220

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+  +  +                +  +        V  R+++ +     +A + G  
Sbjct: 221 YQGKIKLYMVPF--------KEVQFEIINRVPPKLRMVVYRRSMMRMANL--IAEKEGCK 270

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G   +  +          + ++    +   S + V  PL+ + K E   +A+ I  
Sbjct: 271 AVVTGDSLSQVAS---------QTLDNINVIYSASKLAVLPPLIGMDKEEIVAIAKRIET 321

Query: 190 QDLVNLILEE 199
            ++  L  E+
Sbjct: 322 YEISILPYED 331


>gi|205374502|ref|ZP_03227298.1| thiamine biosynthesis protein [Bacillus coahuilensis m4-4]
          Length = 401

 Score = 94.2 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 60/192 (31%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS       + R   +E + F                ++K++EL    
Sbjct: 176 SGKAMLMLSGGLDSPVAGYLTMKRGVEIEAVHFH------SPPYTSERSKEKVIELARIL 229

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +           T+      Q      T    R ++  +     A   G
Sbjct: 230 SGFSGTIKLHIVPF---------TEVQQTIHQQVPENYTMTSTRRMMLKITDLIRAKENG 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  IV G      +         I A+ +           V  PL+   K +    A++I
Sbjct: 281 L-AIVTGESLGQVASQTLHSMSAINAVTST---------PVLRPLISNDKTDIIDSAKEI 330

Query: 188 GGQDLVNLILEE 199
           G  D   L  E+
Sbjct: 331 GTYDTSILPFED 342


>gi|56421330|ref|YP_148648.1| thiamine biosynthesis protein ThiI [Geobacillus kaustophilus
           HTA426]
 gi|81346656|sp|Q5KW56|THII_GEOKA RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|56381172|dbj|BAD77080.1| thiamine biosynthesis [Geobacillus kaustophilus HTA426]
          Length = 401

 Score = 94.2 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A+ R   +E + F                ++K+++L+ K 
Sbjct: 177 SGKAMLMLSGGIDSPVAGYLAMKRGLEIEAVHFF------SPPFTSERAKQKVIDLVRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +              V   I         +       L     L  R  
Sbjct: 231 TTYGGRIKLHIVPF----------TEVQQAIYQGVPNEYSLISTRRAMLRITDALRRRQR 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I  +             +  PL+ + K E  +LA+ I
Sbjct: 281 ALAIVTGESLGQVASQTLESMYVINEVTNT---------PILRPLVSMDKLEIIELAKQI 331

Query: 188 GGQDLVNLILEE 199
           G  D+  L  E+
Sbjct: 332 GTHDISILPYED 343


>gi|217322866|ref|YP_002326598.1| hypothetical protein ABBFA_002700 [Acinetobacter baumannii
           AB307-0294]
 gi|213985812|gb|ACJ56111.1| hypothetical protein ABBFA_002700 [Acinetobacter baumannii
           AB307-0294]
          Length = 310

 Score = 94.2 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 68/239 (28%), Gaps = 37/239 (15%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDY-----GQRNKVELECRLCVRKKIVELMP 65
           ++ LFSGG DS+        +  +   +S  Y      Q +          R +++    
Sbjct: 18  SVCLFSGGLDSTIGAIDLKAQGKKSVLVSHAYPKDRQKQDHVYYDLQFDNARFQVLANPR 77

Query: 66  KW----KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           K      D             G +  ++L+KN                   II L     
Sbjct: 78  KVKEIPADVQMRTRSFNFIAFGALIATALSKN--------------HFSNKIIKLYIPEN 123

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
               +              +      H         +   +   V +  P  +  K E  
Sbjct: 124 GLISIN----PPLTPRRIGALSTRTTHPYFLQKLNILFKNIGLPVEIENPYQYKTKGE-- 177

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
            +  +   Q  +  I   + +C      K    G  C  C  C +R+  + ++  +Y+D
Sbjct: 178 -MMLECKDQSSLKKIAATTVSC-----GKWKRSGMQCGKCLPCLIRRASFDKY--QYKD 228


>gi|15922208|ref|NP_377877.1| hypothetical protein ST1892 [Sulfolobus tokodaii str. 7]
 gi|74573451|sp|Q96ZD9|QUEC1_SULTO RecName: Full=7-cyano-7-deazaguanine synthase 1; AltName:
           Full=7-cyano-7-carbaguanine synthase 1; AltName:
           Full=Archaeosine biosynthesis protein queC 1; AltName:
           Full=PreQ(0) synthase 1
 gi|15622997|dbj|BAB66986.1| 202aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 202

 Score = 94.2 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 52/232 (22%), Positives = 83/232 (35%), Gaps = 40/232 (17%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKWK 68
            ALLL SGG DSS+   +   R    + L  +YGQR  +++L     + +K+ + +    
Sbjct: 2   KALLLMSGGLDSSSAAYYYTRRGLDFDCLFINYGQRSARMQLRSSKIICEKLNKKLLVAD 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                +  +    L                     P+  +  RN++ +  A   A   G 
Sbjct: 62  IRKIRELFISDIWLK--------------------PHEPITHRNLVIIPIAIAFAKEKGY 101

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I+I   + D         + I  I+   NLG    V V TP   + K    KL    G
Sbjct: 102 EEIIIASVKEDCEYE----QNRIEIIKELKNLGEILKVKVSTPFAGMPKSFLLKLGVSAG 157

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
                 L    +++C LG +       Y C  C  C  R++ +       QD
Sbjct: 158 ------LDPSLTYSCLLGHK-------YHCGQCSQCLKRKEAFKSA--NIQD 194


>gi|329925847|ref|ZP_08280576.1| thiamine biosynthesis/tRNA modification protein ThiI [Paenibacillus
           sp. HGF5]
 gi|328939593|gb|EGG35941.1| thiamine biosynthesis/tRNA modification protein ThiI [Paenibacillus
           sp. HGF5]
          Length = 412

 Score = 94.2 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 64/192 (33%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS      A+ R   +E + F                ++K++EL    
Sbjct: 178 NGKAMLLLSGGIDSPVAGWSAMRRGLELECVHFY------SFPYTSQLAKEKVMELTRLL 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  +             +V          N  +       L  A++LA R G
Sbjct: 232 SGYTGKIKLHLVPF----------TDVQTSFVGIGQDNLIITFMRRAMLRIASSLAEREG 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +       +          +G  + + +  PL+ + K +   +A DI
Sbjct: 282 ALAIVTGDSLGQVASQTLPSMN---------VIGRATELPLLRPLVMMDKNDIINIAMDI 332

Query: 188 GGQDLVNLILEE 199
           G  D   L  E+
Sbjct: 333 GTFDTSILPYED 344


>gi|168700757|ref|ZP_02733034.1| ExsB [Gemmata obscuriglobus UQM 2246]
          Length = 232

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 69/222 (31%), Gaps = 21/222 (9%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +L SGG DS+  L+ A+     V  L    G          +        L      +L 
Sbjct: 21  VLVSGGLDSAILLAEAVRACPVVFPLYVRSG-----LHWEAVERAYLERFLAAIAAPNLR 75

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
              +L             T    +   D+     F+PGRN++ L       +   +  + 
Sbjct: 76  PLRVLDQPTADVYGAHWSTTGEGVPGADSADEAVFLPGRNVLLLAKPLIWCHLNAVPFVA 135

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
                T+   +PD            ++  +   V V  P   L K +  +  +       
Sbjct: 136 TAPLGTN--PFPDATPAFYDGFAGIVSSAVRGDVRVLRPYAALHKVDVMRRGR------- 186

Query: 193 VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
               LE + +C    R      G  C +C  C  R++ + + 
Sbjct: 187 -GRPLEHTFSCIRPVR------GLHCGTCNKCAERRQAFRDA 221


>gi|225028528|ref|ZP_03717720.1| hypothetical protein EUBHAL_02807 [Eubacterium hallii DSM 3353]
 gi|224954171|gb|EEG35380.1| hypothetical protein EUBHAL_02807 [Eubacterium hallii DSM 3353]
          Length = 421

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 57/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R   ++   F                ++K+V+L  + 
Sbjct: 206 NGRAMLLLSGGIDSPVAGYMISKRGVSIDATYFH------APPYTSERAKQKVVDLAKEI 259

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +             ++ M I +    +          +  A   A +  
Sbjct: 260 AKYTGPITLHVVNF----------TDIQMAIYEKCPHDELTIIMRRYMMKIAEHFANQDN 309

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             ++V G      +            +           + V  P + L K E  K+A+ I
Sbjct: 310 CLSLVTGESIGQVASQTMHSLYVTNEVCQ---------MPVFRPCIGLDKNEIVKVAEKI 360

Query: 188 GGQDLVNLILEE 199
           G  +   L  E+
Sbjct: 361 GTYETSILPYED 372


>gi|146296764|ref|YP_001180535.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Caldicellulosiruptor saccharolyticus DSM 8903]
 gi|145410340|gb|ABP67344.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 398

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 56/190 (29%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A LL SGG DS         R   +E + F                ++K+++L      
Sbjct: 187 KAHLLLSGGIDSPVAGFMIAKRGVEIEAVHFY------SFPYTGEKAKEKVIDLCRVLAQ 240

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              +   I +               +  A  +A + G  
Sbjct: 241 FTDRLKLYIVPF----------TEIQTTIYEKCNERYLTIIMRRFMMKIAERIAKKNGGL 290

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      +           A            + V  PL+ + K E  ++A++IG 
Sbjct: 291 ALVTGESIGQVASQTIESIICTNAA---------VSMPVLRPLIGMDKEEIIRIAKNIGT 341

Query: 190 QDLVNLILEE 199
            D+  L  E+
Sbjct: 342 YDISILPYED 351


>gi|310643015|ref|YP_003947773.1| tRNA sulfurtransferase [Paenibacillus polymyxa SC2]
 gi|309247965|gb|ADO57532.1| Probable tRNA sulfurtransferase [Paenibacillus polymyxa SC2]
          Length = 408

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 62/192 (32%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS      ++ R   +E + F                ++K+++L    
Sbjct: 178 NGKAMLLLSGGIDSPVAGWSSMRRGLEIECVHFY------SYPFTSERAKEKVIDLAKVL 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   I  +              V          N  +       L  A  LA R G
Sbjct: 232 AGYAGRIKIHLVPF----------TEVQTAFTRTGQDNLIITLMRRSMLRIATMLAEREG 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +       +          +G  + + +  PL+ + K E  ++A+ I
Sbjct: 282 ALALVTGDSLGQVASQTLSSMN---------VIGRSTELPLLRPLVMMDKQEITEIAKQI 332

Query: 188 GGQDLVNLILEE 199
           G  DL  L  E+
Sbjct: 333 GTYDLSILPYED 344


>gi|94310412|ref|YP_583622.1| hypothetical protein Rmet_1470 [Cupriavidus metallidurans CH34]
 gi|93354264|gb|ABF08353.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
          Length = 455

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 61/225 (27%), Gaps = 11/225 (4%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           ++ LFSGG DS       L+       +S      +  E        K    L   +  S
Sbjct: 151 SVSLFSGGLDSLIGAIDLLEDGATPLLVS------HFGEGATSDAQGKLFAGLKKYYIQS 204

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
             E   + +     +     +++                G  +            L   N
Sbjct: 205 SFERLRVGMTFKKGLVADVGSEDSTRGRSFLFFALGVFAGTGLGRRFVLRVPENGLIALN 264

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           + +       S      H    A    + + ++    +  P     K E     +     
Sbjct: 265 VPLDP-LRLGSNSTRTTHPYYMARWNDLLIALDIDGEIRNPYWDKTKGEMAAACR---NP 320

Query: 191 DLVNLILEESHTCYLGKRDKRYEWG-YGCNSCPACYLRQKGWMEF 234
           DL+  +  +S +C    + +    G   C  C  C +R+      
Sbjct: 321 DLLKKLATDSLSCSSPAKARWLGHGIEQCGYCLPCLIRRAALTAA 365


>gi|320528310|ref|ZP_08029472.1| thiamine biosynthesis/tRNA modification protein ThiI [Solobacterium
           moorei F0204]
 gi|320131224|gb|EFW23792.1| thiamine biosynthesis/tRNA modification protein ThiI [Solobacterium
           moorei F0204]
          Length = 394

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 57/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               LL+ SGG DS       + R   VE + F                + K++EL  + 
Sbjct: 175 NGKVLLMLSGGIDSPVAAYQLMKRGLHVEAVHF------ASPPYTSENAKNKVLELASQV 228

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +  G   +  +              + +     +     +  R +  L    +   + G
Sbjct: 229 SEYQGHMKVHVVNF--------TQLQLEIYKHAGDPYAVTLMRRMMFRLADMIS--KKYG 278

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I  G      +       + I  +           + +  PL+   K E   LA+ I
Sbjct: 279 CLAIGTGESVGQVASQTLESINCINTVTN---------MPILRPLVCYDKIEIIDLARKI 329

Query: 188 GGQDLVNLILEE 199
           G  +   L  E+
Sbjct: 330 GTYETSILPFED 341


>gi|312793759|ref|YP_004026682.1| thiamine biosynthesis/tRNA modification protein thii
           [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180899|gb|ADQ41069.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 392

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 59/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A LL SGG DS         R   +E + F                ++K+++L      
Sbjct: 181 RAHLLLSGGIDSPVAGFMIAKRGVEIEAIHFY------SFPYTGEKAKEKVIDLCKVLAK 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              +  +  +              + + I +N              +  A  +A + G  
Sbjct: 235 YTDKIKLYIVPF----------TEIQLSIYENCDERFLTIIMRRFMMKIAQKIAMQNGGL 284

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++ G      +          +A            + V  PL+ + K E  +LA+ IG 
Sbjct: 285 ALITGESIGQVASQTMESLFCTQAA---------VSMPVFRPLIGMDKEEIIRLAKKIGT 335

Query: 190 QDLVNLILEE 199
            D+  L  E+
Sbjct: 336 YDISILPYED 345


>gi|302871659|ref|YP_003840295.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Caldicellulosiruptor obsidiansis OB47]
 gi|302574518|gb|ADL42309.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Caldicellulosiruptor obsidiansis OB47]
          Length = 392

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 59/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A LL SGG DS         R   +E + F                ++K+++L      
Sbjct: 181 RAHLLLSGGIDSPVAGFMIAKRGVEIEAIHFY------SFPYTGEKAKEKVIDLCKVLAK 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              +  +  +              + + I +N              +  A  +A + G  
Sbjct: 235 YTDKIKLYIVPF----------TEIQLSIYENCDERFLTIIMRRFMMKIAQKIAMQNGGL 284

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++ G      +          +A            + V  PL+ + K E  +LA+ IG 
Sbjct: 285 ALITGESIGQVASQTMESLFCTQAA---------VSMPVFRPLIGMDKEEIIRLAKKIGT 335

Query: 190 QDLVNLILEE 199
            D+  L  E+
Sbjct: 336 YDISILPYED 345


>gi|222529535|ref|YP_002573417.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Caldicellulosiruptor bescii DSM 6725]
 gi|222456382|gb|ACM60644.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Caldicellulosiruptor bescii DSM 6725]
          Length = 392

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 59/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A LL SGG DS         R   +E + F                ++K+++L      
Sbjct: 181 RAHLLLSGGIDSPVAGFMIAKRGVEIEAIHFY------SFPYTGEKAKEKVIDLCKVLAK 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              +  +  +              + + I +N              +  A  +A + G  
Sbjct: 235 YTDKIKLYIVPF----------TEIQLSIYENCDERFLTIIMRRFMMKIAQKIAMQNGGL 284

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++ G      +          +A            + V  PL+ + K E  +LA+ IG 
Sbjct: 285 ALITGESIGQVASQTMESLFCTQAA---------VSMPVFRPLIGMDKEEIIRLAKKIGT 335

Query: 190 QDLVNLILEE 199
            D+  L  E+
Sbjct: 336 YDISILPYED 345


>gi|228993379|ref|ZP_04153295.1| thiamine biosynthesis protein thiI [Bacillus pseudomycoides DSM
           12442]
 gi|228766447|gb|EEM15090.1| thiamine biosynthesis protein thiI [Bacillus pseudomycoides DSM
           12442]
          Length = 403

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 54/190 (28%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L  +   
Sbjct: 180 KVMVLLSGGIDSPVAAFLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTK 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              V   I      +  +     + +     +A      
Sbjct: 234 YCKRVTLHLVPF----------TEVQKTINKEIPSSYSMTVMRRMMMRITERIAEERNAL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             V  PL+ + K E  K+A  IG 
Sbjct: 284 AITTGESLGQVASQTLDSMHTINEVTNY---------PVIRPLITMDKLEIIKVANAIGT 334

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 335 YDISIRPYED 344


>gi|228999432|ref|ZP_04159011.1| thiamine biosynthesis protein thiI [Bacillus mycoides Rock3-17]
 gi|228760377|gb|EEM09344.1| thiamine biosynthesis protein thiI [Bacillus mycoides Rock3-17]
          Length = 403

 Score = 93.8 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 54/190 (28%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K+++L  +   
Sbjct: 180 KVMVLLSGGIDSPVAAFLTMKRGVSVEAVHFH------SPPFTSERAKQKVIDLAQELTK 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              V   I      +  +     + +     +A      
Sbjct: 234 YCKRVTLHLVPF----------TEVQKTINKEIPSSYSMTVMRRMMMRITERIAEERNAL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +        TI  +             V  PL+ + K E  K+A  IG 
Sbjct: 284 AITTGESLGQVASQTLDSMHTINEVTNY---------PVIRPLITMDKLEIIKVANAIGT 334

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 335 YDISIRPYED 344


>gi|312622235|ref|YP_004023848.1| thiamine biosynthesis/tRNA modification protein thii
           [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202702|gb|ADQ46029.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Caldicellulosiruptor kronotskyensis 2002]
          Length = 392

 Score = 93.4 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 59/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A LL SGG DS         R   +E + F                ++K+++L      
Sbjct: 181 RAHLLLSGGIDSPVAGFMIAKRGVEIEAIHFY------SFPYTGEKAKEKVIDLCKVLAK 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              +  +  +              + + I +N              +  A  +A + G  
Sbjct: 235 YTDKIKLYIVPF----------TEIQLSIYENCDERFLTIIMRRFMMKIAQKIAMQNGGL 284

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++ G      +          +A            + V  PL+ + K E  +LA+ IG 
Sbjct: 285 ALITGESIGQVASQTMESLFCTQAA---------VSMPVFRPLIGMDKEEIIRLAKKIGT 335

Query: 190 QDLVNLILEE 199
            D+  L  E+
Sbjct: 336 YDISILPYED 345


>gi|116333864|ref|YP_795391.1| thiamine biosynthesis ATP pyrophosphatase [Lactobacillus brevis
           ATCC 367]
 gi|122269449|sp|Q03R12|THII_LACBA RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|116099211|gb|ABJ64360.1| Thiamine biosynthesis ATP pyrophosphatase [Lactobacillus brevis
           ATCC 367]
          Length = 405

 Score = 93.4 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS     + + R  +++ + F                  K  EL  +   
Sbjct: 179 KAVMMLSGGIDSPVAAYYGMRRGVKLDMVHFF------SPPYTSEQALAKAKELTARLAG 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G    + +              +   I++       +  +  + L  AA +A R    
Sbjct: 233 YSGSIQFIQVPF----------TKIQETIKEKVPEGYLMTIQRRLMLRLAAAVAERRHAK 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+   +   + + +  PL+ + K E  K+A++I  
Sbjct: 283 GIFNGESLGQVAS---------QTLESMAAINDVTSMPILRPLLSMDKTEIIKVAENIDT 333

Query: 190 QDLVNLILEE 199
            DL  L  E+
Sbjct: 334 YDLSILPYED 343


>gi|23099653|ref|NP_693119.1| thiamine biosynthesis [Oceanobacillus iheyensis HTE831]
 gi|33301728|sp|Q8EPB3|THII_OCEIH RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|22777883|dbj|BAC14154.1| thiamine biosynthesis [Oceanobacillus iheyensis HTE831]
          Length = 400

 Score = 93.4 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 61/192 (31%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  +LLL SGG DS      A+ R  ++E + F                ++K+++L    
Sbjct: 176 SGKSLLLLSGGIDSPVAGFLAMKRGVQLEAIHFH------SPPFTSERAKQKVLDLTQTL 229

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                   +  +                +  +  N     +  R +  +         + 
Sbjct: 230 TKYGKSIKVHIVPFTKL--------QQEIFREMPNDYAMTIMRRMMFRISERICEQEEI- 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                        +   +      + +++   +   ++  +  PL+ + K E  +++Q+I
Sbjct: 281 ----------LSLTTGENLGQVASQTMQSMHTINEVTNYPIIRPLISMDKQEVIEVSQEI 330

Query: 188 GGQDLVNLILEE 199
           G  +      E+
Sbjct: 331 GTYETSIQPYED 342


>gi|255282408|ref|ZP_05346963.1| thiamine biosynthesis/tRNA modification protein ThiI [Bryantella
           formatexigens DSM 14469]
 gi|255266992|gb|EET60197.1| thiamine biosynthesis/tRNA modification protein ThiI [Bryantella
           formatexigens DSM 14469]
          Length = 393

 Score = 93.4 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 57/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R  +++ + F                ++K+++L    
Sbjct: 180 NGKAMLLLSGGIDSPVAGYMIAKRGVKIDAVYFH------APPYTSERAKQKVIDLARIV 233

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +             ++ + I +               +  A   A   G
Sbjct: 234 SHYSGPIMLHVVNF----------TDIQLYIYEQCPHEELTIIMRRYMMRIAEHFARESG 283

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +          + +++         + V+ PL+   K E   ++  I
Sbjct: 284 SLGLITGESIGQVAS---------QTMQSLAATNEVCTLPVYRPLIGFDKQEIVDVSLKI 334

Query: 188 GGQDLVNLILEE 199
           G  +      E+
Sbjct: 335 GAYETSIQPFED 346


>gi|312127406|ref|YP_003992280.1| thiamine biosynthesis/tRNA modification protein thii
           [Caldicellulosiruptor hydrothermalis 108]
 gi|311777425|gb|ADQ06911.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Caldicellulosiruptor hydrothermalis 108]
          Length = 392

 Score = 93.4 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 59/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A LL SGG DS         R   +E + F                ++K+++L      
Sbjct: 181 RAHLLLSGGIDSPVAGFMIAKRGVEIEAIHFY------SFPYTGEKAKEKVIDLCKVLAK 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              +  +  +              + + I +N              +  A  +A + G  
Sbjct: 235 YTDKIKLYIVPF----------TEIQLSIYENCDERFLTIIMRRFMMKIAQKIAMQNGGL 284

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++ G      +          +A            + V  PL+ + K E  +LA+ IG 
Sbjct: 285 ALITGESIGQVASQTMESLFCTQAA---------VSMPVFRPLIGMDKEEIIRLAKKIGT 335

Query: 190 QDLVNLILEE 199
            D+  L  E+
Sbjct: 336 YDISILPYED 345


>gi|225387765|ref|ZP_03757529.1| hypothetical protein CLOSTASPAR_01535 [Clostridium asparagiforme
           DSM 15981]
 gi|225046126|gb|EEG56372.1| hypothetical protein CLOSTASPAR_01535 [Clostridium asparagiforme
           DSM 15981]
          Length = 394

 Score = 93.4 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 61/192 (31%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R  +++ + F                ++K+V+L    
Sbjct: 180 NGRAMLLLSGGIDSPVAGYMIAKRGVKIDAVYFH------APPYTSDRAKQKVVDLANLV 233

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G  ++  +             ++ + I D               +  A  +A + G
Sbjct: 234 ARYAGPINLYVVNF----------TDIQLYIYDKCPHEELTIIMRRYMMRIAEAIANQTG 283

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +++ G      +          + +++         + V  P++   K E   L++ I
Sbjct: 284 AISLITGESIGQVAS---------QTVQSLAATNEVCTMPVFRPVIGFDKQEIVDLSEKI 334

Query: 188 GGQDLVNLILEE 199
           G  +      E+
Sbjct: 335 GTFETSIQPFED 346


>gi|295092929|emb|CBK82020.1| thiazole biosynthesis/tRNA modification protein ThiI [Coprococcus
           sp. ART55/1]
          Length = 395

 Score = 93.1 bits (229), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 56/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               + L SGG DS         R   VE + F                ++K+++L    
Sbjct: 179 NGRGMALLSGGIDSPVAAYMIAKRGVVVEAVYFH------APPFTSERAKQKVIDLACLV 232

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +  G   +  +             +V M I DN              +  A  LA +  
Sbjct: 233 ANYSGAIRLHVVNFA----------DVQMAIYDNCPHEELTIIMKRYMIKIAEELAEKND 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
               + G      S       +          +   S + V  P + + K E   +++ I
Sbjct: 283 CQCTITGESIGQVSSQTVFSLN---------VINQVSTMPVFRPCIGMDKQEIVDISEKI 333

Query: 188 GGQDLVNLILEE 199
           G  +   L  E+
Sbjct: 334 GTYETSILPYED 345


>gi|317501692|ref|ZP_07959883.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331088423|ref|ZP_08337338.1| tRNA sulfurtransferase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|316896943|gb|EFV19023.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330408190|gb|EGG87678.1| tRNA sulfurtransferase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 394

 Score = 93.1 bits (229), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             SA+LL SGG DS         R   +E + F                ++K+++L    
Sbjct: 180 NGSAMLLLSGGIDSPVAGYMVAKRGVELEAVYFH------APPYTSERAKEKVIDLARLV 233

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +             ++ + I +    +          +  A   A + G
Sbjct: 234 SAYSGPIKLHIVNF----------TDIQLAIYEKCPHDELTIIMRRYMMRIAEHFAKKNG 283

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +           A+           + V+ PL+   K E  ++++ I
Sbjct: 284 CLGLVTGESIGQVASQTMQSLAATNAV---------CTLPVYRPLIGFDKKEIVEISEKI 334

Query: 188 GGQDLVNLILEE 199
              ++     E+
Sbjct: 335 DTYEVSIQPFED 346


>gi|210623574|ref|ZP_03293900.1| hypothetical protein CLOHIR_01850 [Clostridium hiranonis DSM 13275]
 gi|210153444|gb|EEA84450.1| hypothetical protein CLOHIR_01850 [Clostridium hiranonis DSM 13275]
          Length = 397

 Score = 93.1 bits (229), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 59/195 (30%), Gaps = 25/195 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +  A  A+ L SGG DS         R   +E + F                R+K+++L 
Sbjct: 181 MGTAGKAMSLLSGGIDSPVATWMVAKRGMDIECIHFH------TYPFTSERSREKVLDLA 234

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  G   +          H      +  +I +               ++    LA 
Sbjct: 235 RTLSRYCGPIKV----------HCCNILEIEKEITEKLNREETTIHSRRFMMMITQRLAE 284

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           +     IV G      +           A+           + V  PL+ + K +   +A
Sbjct: 285 QRHCQAIVTGESIGQVASQTIYGLTCTNAV---------CSLPVFRPLIAMDKSDIIDIA 335

Query: 185 QDIGGQDLVNLILEE 199
           Q+IG  DL  +  E+
Sbjct: 336 QEIGTYDLSIVPEED 350


>gi|225017115|ref|ZP_03706307.1| hypothetical protein CLOSTMETH_01040 [Clostridium methylpentosum
           DSM 5476]
 gi|224950128|gb|EEG31337.1| hypothetical protein CLOSTMETH_01040 [Clostridium methylpentosum
           DSM 5476]
          Length = 391

 Score = 93.1 bits (229), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 60/192 (31%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+LL SGG DS         R  ++  + F                R+K+  L  + 
Sbjct: 178 SGKAMLLVSGGIDSPVAGYMMAKRGLQLHAVHF------VSPPYTSDRARQKVETLCEEM 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+             H      +   ++++     F      + +  A  L  +  
Sbjct: 232 AHYCGDI----------TFHCVPFTEIQEALKEHCPEELFTILMRRLMMKIAQRLCAQQD 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  ++ G      +           A+           + V  P++ + K E  ++A+ I
Sbjct: 282 IHALITGESVGQVASQTLGAIACTDAVCE---------MPVFRPVIGMDKNEIIEIARRI 332

Query: 188 GGQDLVNLILEE 199
           G  +   L  E+
Sbjct: 333 GTFETSILPYED 344


>gi|253580715|ref|ZP_04857979.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848086|gb|EES76052.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 393

 Score = 93.1 bits (229), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R  +++ + F                ++K+V+L  + 
Sbjct: 180 NGKAMLLLSGGIDSPVAGYMIAKRGVKIDAVYFH------APPYTSERAKQKVVDLAKQV 233

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +             ++ + I D    +          +  A   A    
Sbjct: 234 AKYSGPIRLHVINF----------TDIQLYIYDQCPHDELTIIMRRYMMRIAEHFAKESR 283

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +          + +++         + V+ P++   K E  + + +I
Sbjct: 284 CLGLITGESIGQVAS---------QTLQSLAATNEVCTLPVYRPVIGFDKQEIVERSWEI 334

Query: 188 GGQDLVNLILEE 199
           G  +      E+
Sbjct: 335 GTYETSIQPFED 346


>gi|153815338|ref|ZP_01968006.1| hypothetical protein RUMTOR_01572 [Ruminococcus torques ATCC 27756]
 gi|145847400|gb|EDK24318.1| hypothetical protein RUMTOR_01572 [Ruminococcus torques ATCC 27756]
          Length = 406

 Score = 93.1 bits (229), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             SA+LL SGG DS         R   +E + F                ++K+++L    
Sbjct: 192 NGSAMLLLSGGIDSPVAGYMVAKRGVELEAVYFH------APPYTSERAKEKVIDLARLV 245

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +             ++ + I +    +          +  A   A + G
Sbjct: 246 SAYSGPIKLHIVNF----------TDIQLAIYEKCPHDELTIIMRRYMMRIAEHFAKKNG 295

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +           A+           + V+ PL+   K E  ++++ I
Sbjct: 296 CLGLVTGESIGQVASQTMQSLAATNAV---------CTLPVYRPLIGFDKKEIVEISEKI 346

Query: 188 GGQDLVNLILEE 199
              ++     E+
Sbjct: 347 DTYEVSIQPFED 358


>gi|168335000|ref|ZP_02693116.1| thiamine biosynthesis/tRNA modification protein ThiI [Epulopiscium
           sp. 'N.t. morphotype B']
          Length = 393

 Score = 93.1 bits (229), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 55/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A LL SGG DS         R   +  + F                + K++EL  K 
Sbjct: 182 NGKATLLLSGGIDSPVAGWMIAKRGVEINAVYFH------SPPYTSERAKDKVIELAKKL 235

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +              + + IQ+    N        I +  A  +A + G
Sbjct: 236 AIYTGGIRVHVINF----------TQIQLAIQEQCPINQLTIIMRRIMMEVAQRIADKTG 285

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +           A              V  PL+   K E  K+A+ I
Sbjct: 286 SQALITGESIGQVASQTLHSLVVTNAAADR---------PVFRPLIGFDKQEIIKIAERI 336

Query: 188 GGQDLVNLILEE 199
              +   L  E+
Sbjct: 337 DTFNTSILPYED 348


>gi|117676187|ref|YP_863763.1| hypothetical protein Shewana3_4248 [Shewanella sp. ANA-3]
 gi|117615011|gb|ABK50464.1| conserved hypothetical protein [Shewanella sp. ANA-3]
          Length = 434

 Score = 93.1 bits (229), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 59/221 (26%), Gaps = 19/221 (8%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           ++ LFSGG DS+  +   L        +S  Y    K +   +  +   +     +++ +
Sbjct: 150 SVCLFSGGLDSAIGVIDLLKEGRSPLLVSHAY----KGDKTHQDQIASALNGQYSRFEVN 205

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                      +   + S      A            V  +N I L         L    
Sbjct: 206 ADPHLYTGETDITMRTRSLNFLAFAAV---GASAVKTVSQQNEIDLFVPENGFISLNAPL 262

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
                     +      H         I    E    +     +  K +     Q    +
Sbjct: 263 ----TPRRIGTLSTRTTHPHFIESIQRIFEAAEIPCRIVNRYQFKTKGQMVTECQ---NK 315

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
            L+  I++ + +C          W   C  C  C +R+   
Sbjct: 316 LLLAKIVDNTVSC-----SHWKRWNQQCGVCVPCIIRRAAL 351


>gi|52081451|ref|YP_080242.1| thiamine biosynthesis protein ThiI [Bacillus licheniformis ATCC
           14580]
 gi|52786826|ref|YP_092655.1| thiamine biosynthesis protein ThiI [Bacillus licheniformis ATCC
           14580]
 gi|319647359|ref|ZP_08001581.1| thiamine biosynthesis protein thiI [Bacillus sp. BT1B_CT2]
 gi|81384821|sp|Q65G52|THII_BACLD RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|52004662|gb|AAU24604.1| Thiamine biosynthesis protein [Bacillus licheniformis ATCC 14580]
 gi|52349328|gb|AAU41962.1| YtbJ [Bacillus licheniformis ATCC 14580]
 gi|317390706|gb|EFV71511.1| thiamine biosynthesis protein thiI [Bacillus sp. BT1B_CT2]
          Length = 401

 Score = 93.1 bits (229), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 61/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+L+ SGG DS     +A+ R   +E + F                ++K+++L  +   
Sbjct: 179 KAMLMISGGIDSPVAGFYAMKRGLEIEAVHFF------SPPYTSERAKQKVIDLTKRLTA 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+  +  +                  IQ     N  +     + L  A  L  R    
Sbjct: 233 FGGDIKLHIVPF----------TKTQELIQKQIPENYSMTATRRLMLQIADKLRERHNAL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +         I A+ +           V  PL+ + K E  + A++I  
Sbjct: 283 AIFTGESLGQVASQTLESMYAINAVTST---------PVLRPLIGMDKTEIIEKAKEIDT 333

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 334 YDISIRPYED 343


>gi|329723320|gb|EGG59850.1| queuosine biosynthesis protein QueC [Staphylococcus epidermidis
           VCU144]
          Length = 155

 Score = 92.7 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 64/159 (40%), Positives = 101/159 (63%), Gaps = 10/159 (6%)

Query: 79  LAILGDISHSSLT-KNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCE 137
           +++L  ++ ++LT   ++++  D+ +PNTFVP RN++FL FA  LAY++   +I+ GVCE
Sbjct: 1   MSLLSQLTPNALTQHELSIEDNDDGIPNTFVPARNLLFLSFAGALAYQIHAKHIITGVCE 60

Query: 138 TDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLIL 197
           TD+SGYPDCR   I+++   ++L M+    +HTPLMWL K +TW L+  +G   +++ I 
Sbjct: 61  TDFSGYPDCRDSFIKSMNVTLSLSMDKDFVIHTPLMWLDKAQTWALSDKLG---VLDYIR 117

Query: 198 EESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
             + TCY G        G GC  CPAC+LR +G   + E
Sbjct: 118 HNTLTCYNGI------IGDGCGECPACHLRARGLKHYLE 150


>gi|170745411|ref|YP_001766868.1| hypothetical protein Mrad2831_6141 [Methylobacterium radiotolerans
           JCM 2831]
 gi|170659012|gb|ACB28066.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM
           2831]
          Length = 435

 Score = 92.7 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 62/233 (26%), Gaps = 27/233 (11%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLC---VRKKIV 61
           + ++ SA  LFSGG DS       + + +R   +S  Y    + +            +  
Sbjct: 145 LSRSESA-CLFSGGLDSYIGALDLIAQGERPLLVSHAYRGDRRYQDRTAHALPVACARFS 203

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                   S   D  +       +++ +       +++  N    +VP   +I L     
Sbjct: 204 ANAHP-TWSGPSDVSMRTRSFNFLAYGAAAATAISQMRAGNRVTLWVPENGLIALNAPL- 261

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
                              S      H         I   +   V +  PL    K E  
Sbjct: 262 -------------TPRRIGSHSTRTTHPYFLQSMQNILDAVGLPVAIVNPLRHQTKGEMV 308

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
                        +    + +C      K    G  C  C  C +R+  +   
Sbjct: 309 LRHARDPAFVAQAV---RTVSC-----GKWKRDGTQCGRCVPCLIRRASFHAA 353


>gi|157693359|ref|YP_001487821.1| thiamine biosynthesis protein ThiI [Bacillus pumilus SAFR-032]
 gi|189030621|sp|A8FG94|THII_BACP2 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|157682117|gb|ABV63261.1| thiamine biosynthesis protein [Bacillus pumilus SAFR-032]
          Length = 401

 Score = 92.7 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 63/192 (32%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A+ R  ++E + F                ++K+++L    
Sbjct: 177 SGRAMLMLSGGFDSPVAGYQAMKRGIQIEAVHFF------SPPYTSERAKQKVIDLTECL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               GE  +  +              +   I      N  +     + L  A  +  +  
Sbjct: 231 AAYGGEIKLHIVPF----------TKIQELIHKQVPENYTMTSTRRMMLKIADKIREKRD 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +          + +E+   +   ++  +  PL+ + K +    A+ I
Sbjct: 281 ALAIITGESLGQVAS---------QTLESMYAINHVTNTPIIRPLIAVDKNDIIDEARRI 331

Query: 188 GGQDLVNLILEE 199
           G  +      E+
Sbjct: 332 GTYETSIQPFED 343


>gi|302671975|ref|YP_003831935.1| thiamine biosynthesis/tRNA modification protein ThiI [Butyrivibrio
           proteoclasticus B316]
 gi|302396448|gb|ADL35353.1| thiamine biosynthesis/tRNA modification protein ThiI [Butyrivibrio
           proteoclasticus B316]
          Length = 400

 Score = 92.7 bits (228), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 59/190 (31%), Gaps = 24/190 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+LL SGG DS         R   +E + F+               ++K+++L      
Sbjct: 187 KAMLLLSGGIDSPVAGYMVAKRGVDIEAIYFN------APPYTSEKAKQKVIDLAGVVAK 240

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+  +  +             ++ M I +    +          +  A  +A + G  
Sbjct: 241 YTGKVRLHVINF----------TDIQMYIYEKCPHDELTIIMRRYMMKIADIIAGQTGCM 290

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++ G      +                    + + + V+ PL+   K +   ++  I  
Sbjct: 291 GLITGESIGQVASQTMQSLMCTG--------EVVTDMPVYRPLIAFDKQDIVDISVKIDA 342

Query: 190 QDLVNLILEE 199
            +   L  E+
Sbjct: 343 YETSILPYED 352


>gi|312876842|ref|ZP_07736819.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796357|gb|EFR12709.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Caldicellulosiruptor lactoaceticus 6A]
          Length = 392

 Score = 92.7 bits (228), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 60/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A LL SGG DS         R   +E + F             +  ++K+++L      
Sbjct: 181 RAHLLLSGGIDSPVAGFMIAKRGVEIEAIHFY------SFPYTGVKAKEKVIDLCKVLAK 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              +  +  +              + + I +N              +  A  +A + G  
Sbjct: 235 YTDKIKLYIVPF----------TEIQLSIYENCDERFLTIIMRRFMMKIAQKIAMQNGGL 284

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++ G      +          +A            + V  PL+ + K E  +LA+ IG 
Sbjct: 285 ALITGESIGQVASQTMESLFCTQAA---------VSMPVFRPLIGMDKEEIIRLAKKIGT 335

Query: 190 QDLVNLILEE 199
            D+  L  E+
Sbjct: 336 YDISILPYED 345


>gi|194017236|ref|ZP_03055848.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
           pumilus ATCC 7061]
 gi|194011104|gb|EDW20674.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
           pumilus ATCC 7061]
          Length = 401

 Score = 92.7 bits (228), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 64/192 (33%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A+ R  ++E + F                ++K+++L    
Sbjct: 177 SGRAMLMLSGGFDSPVAGYQAMKRGIQIEAVHFF------SPPYTSERAKQKVIDLTECL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               GE  +  +              +   I      N  +     + L  A  +  +  
Sbjct: 231 AAYGGEVKLHIVPF----------TKIQELIHKQVPENYTMTSTRRMMLKIADKIREKRD 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +          + +E+   +   ++  +  PL+ + K +  + A+ I
Sbjct: 281 ALAIITGESLGQVAS---------QTLESMYAINHVTNTPIIRPLIAVDKNDIIEEARRI 331

Query: 188 GGQDLVNLILEE 199
           G  +      E+
Sbjct: 332 GTYETSIQPFED 343


>gi|323339479|ref|ZP_08079758.1| thiamine biosynthesis protein ThiI [Lactobacillus ruminis ATCC
           25644]
 gi|323093093|gb|EFZ35686.1| thiamine biosynthesis protein ThiI [Lactobacillus ruminis ATCC
           25644]
          Length = 410

 Score = 92.3 bits (227), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+L+ SGG DS      A+ R   +E + F                  K  EL  K   
Sbjct: 184 RAMLMLSGGIDSPVAGYLAMKRGVDIEMVHFF------SPPYTSEQALNKAKELTAKLTP 237

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G    + +              +   ++ +      +  +    L     LA + G  
Sbjct: 238 YVGRIQFIEVPF----------TEIQETVKHDVPSGYLMTIQRRFMLRLTEALAKKRGGL 287

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+   +   + + V  P++ + K E  K+AQ I  
Sbjct: 288 AIFNGEALGQVAS---------QTLESMAAINDVTTMPVLRPVVSMDKNEIIKIAQKIDT 338

Query: 190 QDLVNLILEE 199
            DL  +  E+
Sbjct: 339 FDLSIMPFED 348


>gi|251793880|ref|YP_003008612.1| hypothetical protein NT05HA_2217 [Aggregatibacter aphrophilus
           NJ8700]
 gi|247535279|gb|ACS98525.1| conserved hypothetical protein [Aggregatibacter aphrophilus NJ8700]
          Length = 438

 Score = 92.3 bits (227), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 27/237 (11%), Positives = 68/237 (28%), Gaps = 18/237 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +    + LFSGG DS+      L++      +S  Y    K +   +  + +++ +    
Sbjct: 145 RNKDCVCLFSGGLDSAIGTIDLLEQGHSPVLVSHSY----KGDKSRQQAIIQQLNQNGYI 200

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            + S      +    L +   + +T              +    + +        +    
Sbjct: 201 NQFSQFNA--IAQPHLNNGKSTEITMRTRSLNFLAFAIVSAYALQKVAQKKIDILVPENG 258

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I+           +      H         +   +    T+  P  +  K +     ++
Sbjct: 259 VISINAPLTVRRVGTLSTRTTHPYFIQEIQKLFTAVNIPFTLRNPYQFKTKGQMIAECRN 318

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQ 239
           +    L+  I+ ++ +C              C  C  C +R+            +Y+
Sbjct: 319 L---PLLQQIIPDTVSC-----SHWKRKNQQCGVCVPCLIRRASLHYAGITNDTQYE 367


>gi|217969366|ref|YP_002354600.1| hypothetical protein Tmz1t_0938 [Thauera sp. MZ1T]
 gi|217506693|gb|ACK53704.1| conserved hypothetical protein [Thauera sp. MZ1T]
          Length = 455

 Score = 92.3 bits (227), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 61/225 (27%), Gaps = 11/225 (4%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           +L LFSGG DS       L+       +S      +  E        K +  L   +  S
Sbjct: 151 SLSLFSGGLDSLIGAIDLLEDGATPLLVS------HFGEGATSDAQGKLLTGLKKHYDRS 204

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
             E   + +     +     ++N         L      G  +            L   N
Sbjct: 205 SFERLRVGMTFDDGLVEGVGSENSTRGRSFLFLALGVFAGTGLGRRFTLRVPENGLIALN 264

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           + +       S      H    A    +   +     +  P     K E     +     
Sbjct: 265 VPLDP-LRLGSNSTRTTHPYYMARWNDLLGSLGIDGEILNPYWDKTKGEMVAGCR---NP 320

Query: 191 DLVNLILEESHTCYLGKRDKRYEWG-YGCNSCPACYLRQKGWMEF 234
            L+  +  +S +C    + +    G   C  C  C +R+   M  
Sbjct: 321 ALLKKLATDSLSCSSPTKGRWQGLGIEHCGYCLPCLIRRAALMTA 365


>gi|154496284|ref|ZP_02034980.1| hypothetical protein BACCAP_00571 [Bacteroides capillosus ATCC
           29799]
 gi|150274367|gb|EDN01444.1| hypothetical protein BACCAP_00571 [Bacteroides capillosus ATCC
           29799]
          Length = 390

 Score = 92.3 bits (227), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 59/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+ L SGG DS         R   ++ + F                + K++EL      
Sbjct: 180 RAVSLLSGGIDSPVASWMMAKRGLALDMVHFF------SYPYTSPEAKDKVIELARLITP 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G   +  +              +  +++ +     F        +  A  +AYR+G  
Sbjct: 234 WCGRLTVHVVPF----------TKIQEELRRSCPEELFTILMRRFMMRIACRVAYRVGAG 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      +                   G    + +  P++ + K E  ++A+ IG 
Sbjct: 284 ALVTGESLGQVASQTMSAMR---------MTGAVCDLPILRPVVGMDKEEIVRIARKIGT 334

Query: 190 QDLVNLILEE 199
            +   L  E+
Sbjct: 335 FETSILPYED 344


>gi|239627765|ref|ZP_04670796.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239517911|gb|EEQ57777.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 394

 Score = 92.3 bits (227), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 60/192 (31%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R  +++ + F                ++K+V+L    
Sbjct: 180 NGKAMLLLSGGIDSPVAGYMIAKRGVKIDAVYFH------APPYTSERAKQKVVDLANLV 233

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +             ++ + I D               +  A T+A + G
Sbjct: 234 ARYAGPIMLHVVNF----------TDIQLYIYDKCPHEELTIIMRRYMMRIAQTIAGQNG 283

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +          + +++         + V  P++   K E   +++ I
Sbjct: 284 AIGLITGESIGQVAS---------QTLQSLAATNEVCTMPVFRPVIGFDKQEIVDVSEKI 334

Query: 188 GGQDLVNLILEE 199
           G  +      E+
Sbjct: 335 GTYETSIQPFED 346


>gi|218281546|ref|ZP_03487975.1| hypothetical protein EUBIFOR_00540 [Eubacterium biforme DSM 3989]
 gi|218217335|gb|EEC90873.1| hypothetical protein EUBIFOR_00540 [Eubacterium biforme DSM 3989]
          Length = 396

 Score = 92.3 bits (227), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 67/190 (35%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DS       + R   +E + +                ++K++EL      
Sbjct: 178 KAMVLLSGGIDSPVACYLMMKRGVHIECIHY------ASPPYTSQNAQEKVMELARLVSG 231

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+  +  +             ++ + I  N   +  +     + +  A  LA +    
Sbjct: 232 YQGDVLVHVVPF----------TDLQLAIYQNADESYAITLMRRMMMRIATGLAQKRHAQ 281

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+ + +   +++ +  P++ + K E   L++ IG 
Sbjct: 282 AIATGESIGQVAS---------QTLESMLAINDVTNMPIIRPVVCMDKVEIIDLSKKIGT 332

Query: 190 QDLVNLILEE 199
            +   L  E+
Sbjct: 333 YETSILPYED 342


>gi|260222251|emb|CBA31627.1| hypothetical protein Csp_D28070 [Curvibacter putative symbiont of
          Hydra magnipapillata]
          Length = 143

 Score = 92.3 bits (227), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 48/83 (57%), Positives = 64/83 (77%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             SAL+LFSGGQDS+TCL+ AL R++RVET++FDY QR+ VELE RL V ++I    P+
Sbjct: 1  MHTSALVLFSGGQDSTTCLAHALARYERVETIAFDYRQRHNVELEARLNVLREIKTRFPQ 60

Query: 67 WKDSLGEDHILPLAILGDISHSS 89
          W   LGEDH+L LA+LG++S +S
Sbjct: 61 WAAKLGEDHLLDLAVLGEVSETS 83


>gi|260589079|ref|ZP_05854992.1| thiamine biosynthesis/tRNA modification protein ThiI [Blautia
           hansenii DSM 20583]
 gi|331082509|ref|ZP_08331634.1| tRNA sulfurtransferase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|260540499|gb|EEX21068.1| thiamine biosynthesis/tRNA modification protein ThiI [Blautia
           hansenii DSM 20583]
 gi|330400487|gb|EGG80117.1| tRNA sulfurtransferase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 392

 Score = 92.3 bits (227), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 56/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             SA+LL SGG DS         R   ++ + F                ++K+V+L    
Sbjct: 179 NGSAMLLLSGGIDSPVAGYMIAKRGVTLDAVYFH------APPYTSERAKQKVVDLAKLV 232

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +             ++ + I D               +  A   A + G
Sbjct: 233 AKYSGPIRLHVVNF----------TDIQLYIYDKCPHEELTIIMRRYMMKIAEEFAKKDG 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +          + I +         + V  P++   K E   +A  I
Sbjct: 283 CLGLITGESIGQVAS---------QTIHSLAATNDVCTMPVFRPVIGFDKQEIVDVALKI 333

Query: 188 GGQDLVNLILEE 199
              +   L  E+
Sbjct: 334 NTYETSILPYED 345


>gi|295109584|emb|CBL23537.1| thiazole biosynthesis/tRNA modification protein ThiI [Ruminococcus
           obeum A2-162]
          Length = 393

 Score = 91.9 bits (226), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 55/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R  ++E + F                ++K+V+L    
Sbjct: 180 NGKAMLLLSGGIDSPVAGYMIAKRGVKIEAVYFH------APPYTSERAKQKVVDLAKLV 233

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +             ++ + I D               +  A   A +  
Sbjct: 234 ARYSGPIRLHVVNF----------TDIQLYIYDQCPHEELTIIMRRYMMRIAEHFARKDK 283

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +            +           + V+ P++   K E  ++++ I
Sbjct: 284 CLGLITGESIGQVASQTLQSLAATDEVCE---------LPVYRPVIGFDKEEIVQISRKI 334

Query: 188 GGQDLVNLILEE 199
              +      E+
Sbjct: 335 NTFETSIQPFED 346


>gi|329727866|gb|EGG64316.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus epidermidis VCU144]
          Length = 407

 Score = 91.9 bits (226), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 59/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   VE + F                + K++EL     +
Sbjct: 179 KTLLMLSGGIDSPVAGIEVMKRGVTVEAIHFH------SPPFTSEKAKDKVIELTRILAE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              +  +I     P   +     + +  +  + +++   
Sbjct: 233 RVGPIKLHLVPF----------TEIQKQINKVVHPRYTMTSTRRMMMRISDKVVHQINAN 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +                  +   +   V  PL+ L K +  K A+++G 
Sbjct: 283 AIVNGENLGQVASQTLKSMY---------AINHVTATPVLRPLLTLDKEDIIKKAKELGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 FETSIQPYED 343


>gi|319401028|gb|EFV89247.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus epidermidis FRI909]
          Length = 407

 Score = 91.9 bits (226), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 59/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   VE + F                + K++EL     +
Sbjct: 179 KTLLMLSGGIDSPVAGIEVMKRGVTVEAIHFH------SPPFTSEKAKDKVIELTRILAE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              +  +I     P   +     + +  +  + +++   
Sbjct: 233 RVGPIKLHLVPF----------TEIQKQINKVVHPRYTMTSTRRMMMRISDKVVHQINAN 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +                  +   +   V  PL+ L K +  K A+++G 
Sbjct: 283 AIVNGENLGQVASQTLKSMY---------AINHVTATPVLRPLLTLDKEDIIKKAKELGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 FETSIQPYED 343


>gi|325678421|ref|ZP_08158041.1| thiamine biosynthesis/tRNA modification protein ThiI [Ruminococcus
           albus 8]
 gi|324109922|gb|EGC04118.1| thiamine biosynthesis/tRNA modification protein ThiI [Ruminococcus
           albus 8]
          Length = 392

 Score = 91.9 bits (226), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 54/189 (28%), Gaps = 24/189 (12%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           A+LL SGG DS         R   VE + F      +         R K+ +L       
Sbjct: 181 AMLLLSGGIDSPVAGYMMARRGAVVEAIHF------EAPPYTSDRARMKVEKLAELMTAY 234

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G+     +           T+       +       +  R ++  +          I  
Sbjct: 235 CGDIKFFCVPF---------TEIQLKLRANCPEELFTILMRRLMMEIAQRICEKEDDIQA 285

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           ++ G      +           A            + V  P + L K E  ++A+ IG  
Sbjct: 286 LITGESLGQVASQTMYAMVCTDAACR---------MPVFRPCVGLDKAEIIEIARKIGTF 336

Query: 191 DLVNLILEE 199
           +   L  E+
Sbjct: 337 ETSILPYED 345


>gi|242242979|ref|ZP_04797424.1| thiamine biosynthesis protein [Staphylococcus epidermidis W23144]
 gi|242233580|gb|EES35892.1| thiamine biosynthesis protein [Staphylococcus epidermidis W23144]
          Length = 407

 Score = 91.9 bits (226), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 59/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   VE + F                + K++EL     +
Sbjct: 179 KTLLMLSGGIDSPVAGIEVMKRGVTVEAIHFH------SPPFTSEKAKDKVIELTRILAE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              +  +I     P   +     + +  +  + +++   
Sbjct: 233 RVGPIKLHLVPF----------TEIQKQINKVVHPRYTMTSTRRMMMRISDKVVHQINAN 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +                  +   +   V  PL+ L K +  K A+++G 
Sbjct: 283 AIVNGENLGQVASQTLKSMY---------AINHVTATPVLRPLLTLDKEDIIKKAKELGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 FETSIQPYED 343


>gi|27468309|ref|NP_764946.1| putative thiamine biosynthesis protein [Staphylococcus epidermidis
           ATCC 12228]
 gi|57867227|ref|YP_188851.1| thiamine biosynthesis protein ThiI [Staphylococcus epidermidis
           RP62A]
 gi|251811105|ref|ZP_04825578.1| thiamine biosynthesis protein [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282875863|ref|ZP_06284730.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus epidermidis SK135]
 gi|293366338|ref|ZP_06613018.1| thiamine biosynthesis protein ThiI [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|33301723|sp|Q8CNW7|THII_STAES RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|71153654|sp|Q5HNJ0|THII_STAEQ RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|27315855|gb|AAO04990.1|AE016748_224 putative thiamine biosynthesis protein [Staphylococcus epidermidis
           ATCC 12228]
 gi|57637885|gb|AAW54673.1| thiamine biosynthesis protein ThiI [Staphylococcus epidermidis
           RP62A]
 gi|251805325|gb|EES57982.1| thiamine biosynthesis protein [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281294888|gb|EFA87415.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus epidermidis SK135]
 gi|291319576|gb|EFE59942.1| thiamine biosynthesis protein ThiI [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329737383|gb|EGG73637.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus epidermidis VCU028]
 gi|329737487|gb|EGG73740.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus epidermidis VCU045]
          Length = 407

 Score = 91.9 bits (226), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 59/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   VE + F                + K++EL     +
Sbjct: 179 KTLLMLSGGIDSPVAGIEVMKRGVTVEAIHFH------SPPFTSEKAKDKVIELTRILAE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              +  +I     P   +     + +  +  + +++   
Sbjct: 233 RVGPIKLHLVPF----------TEIQKQINKVVHPRYTMTSTRRMMMRISDKVVHQINAN 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +                  +   +   V  PL+ L K +  K A+++G 
Sbjct: 283 AIVNGENLGQVASQTLKSMY---------AINHVTATPVLRPLLTLDKEDIIKKAKELGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 FETSIQPYED 343


>gi|325919879|ref|ZP_08181869.1| ExsB protein [Xanthomonas gardneri ATCC 19865]
 gi|325549663|gb|EGD20527.1| ExsB protein [Xanthomonas gardneri ATCC 19865]
          Length = 196

 Score = 91.9 bits (226), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 46/142 (32%), Positives = 65/142 (45%), Gaps = 16/142 (11%)

Query: 100 DNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN 159
            + +P T+VP RN I L  A   A  +G  ++  GV   DYSGYPDCR + +RA E   N
Sbjct: 56  GDGIPVTYVPARNTIMLSLALGWAEVIGANDLFCGVNAVDYSGYPDCRPEFVRAFEVLAN 115

Query: 160 LGMESHV-----TVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEW 214
           L  ++ V      VH PL +L K +  +    +G      +    + +CY    D     
Sbjct: 116 LATKAGVEGAGLRVHAPLQFLSKADIVREGVRLG------VDFGLTVSCYRADAD----- 164

Query: 215 GYGCNSCPACYLRQKGWMEFKE 236
           G  C  C AC LR  G+ +   
Sbjct: 165 GRACGHCDACRLRAAGFTDAGI 186


>gi|153812693|ref|ZP_01965361.1| hypothetical protein RUMOBE_03100 [Ruminococcus obeum ATCC 29174]
 gi|149831209|gb|EDM86298.1| hypothetical protein RUMOBE_03100 [Ruminococcus obeum ATCC 29174]
          Length = 393

 Score = 91.9 bits (226), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 55/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R  ++E + F                ++K+V+L    
Sbjct: 180 NGKAMLLLSGGIDSPVAGYMIAKRGVKIEAVYFH------APPYTSERAKQKVVDLAKLV 233

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +             ++ + I D               +  A   A +  
Sbjct: 234 ARYSGPIRLHVVNF----------TDIQLYIYDQCPHEELTIIMRRYMMRIAEHFARKDK 283

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +            +           + V+ P++   K E  ++++ I
Sbjct: 284 CLGLITGESIGQVASQTLQSLAATDEVCE---------LPVYRPVIGFDKEEIVQISRKI 334

Query: 188 GGQDLVNLILEE 199
              +      E+
Sbjct: 335 NTFETSIQPFED 346


>gi|323692754|ref|ZP_08106982.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           symbiosum WAL-14673]
 gi|323503196|gb|EGB19030.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           symbiosum WAL-14673]
          Length = 392

 Score = 91.9 bits (226), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 56/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R   +E   F                ++K+++L    
Sbjct: 180 NGKAMLLLSGGIDSPVAGYMIAKRGVTIEATYFH------APPYTSERAKQKVIDLAKLV 233

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +             ++ + I D               +  A  LA + G
Sbjct: 234 SRYSGPIKLHVVNF----------TDIQLYIYDKCPHEELTIIMRRYMMKIAEELAKKDG 283

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +          + + +         + V  P++   K E   ++Q I
Sbjct: 284 CLGLITGESIGQVAS---------QTVHSLAVTNEVCTLPVFRPVIGFDKQEIVDISQKI 334

Query: 188 GGQDLVNLILEE 199
           G  +      E+
Sbjct: 335 GTFETSIEPFED 346


>gi|229543529|ref|ZP_04432589.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
           coagulans 36D1]
 gi|229327949|gb|EEN93624.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
           coagulans 36D1]
          Length = 402

 Score = 91.9 bits (226), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 60/192 (31%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A+ R  +VE + F                ++K ++L  K 
Sbjct: 177 SGKAMLMLSGGIDSPVAGYLAMKRGVKVEAVHFH------SPPFTSPRAKQKALDLAQKI 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +              +   I         +  +  + L     L     
Sbjct: 231 SAYSGSMKVHIVPF----------TKIQETIHKGVPEGYSMTVQRRVMLEITDRLRKIHN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +                + +   +   V  PL+ + K +   +AQ I
Sbjct: 281 GLAIVTGESLGQVASQTLDSM---------VAINDVTTTPVLRPLVSMDKLDIIDIAQKI 331

Query: 188 GGQDLVNLILEE 199
           G  D+ +L  E+
Sbjct: 332 GTYDISSLPYED 343


>gi|163781921|ref|ZP_02176921.1| hypothetical protein HG1285_03523 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159883141|gb|EDP76645.1| hypothetical protein HG1285_03523 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 203

 Score = 91.9 bits (226), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 79/227 (34%), Gaps = 35/227 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
               +LFS G +S++ L + L+R      L    G          L   +++   +    
Sbjct: 2   KKVGVLFSAGVESTSLLVYYLERGYLTLPLYARCG---LSWERTELKWSERLWAFLKYRY 58

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +L      P + L     S                   +P RNI  ++ A   AY  GI
Sbjct: 59  KNLMPLKTFPASGLQPSKGS-----------------IEIPLRNITLVMGAVVHAYVKGI 101

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             + +G        +PD   D +  +E  I+ G   ++++ TP M ++K+E  +      
Sbjct: 102 RKVALGSLGIY--PFPDNNRDYLDRLEALISEGARENISLETPFMGMEKWEVVREFYR-- 157

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
                      + +C           G  C  C  C  R++G+++  
Sbjct: 158 -----KAPYRLTFSCVKPI------IGKHCGKCEKCLERKEGFLKAG 193


>gi|295099739|emb|CBK88828.1| thiazole biosynthesis/tRNA modification protein ThiI [Eubacterium
           cylindroides T2-87]
          Length = 399

 Score = 91.5 bits (225), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 60/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DS       + R   +E + +                + K++EL  +   
Sbjct: 178 KAMVLLSGGIDSPVASYLMMKRGTHIECIHY------ASPPYTSQNAQDKVMELAQQICG 231

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+  +  +             N+ + I  +   +  +     + +  A  LA +    
Sbjct: 232 YQGDLLVHVVPF----------TNLQLAIYQHADESYAITLMRRMMMRIATGLAEKRHAQ 281

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +                  +   +   +  P++ + K E   LA+ IG 
Sbjct: 282 AIATGESIGQVASQTLESMQ---------AINEVTSTPIIRPVVCMDKVEIIDLAKKIGT 332

Query: 190 QDLVNLILEE 199
            +   L  E+
Sbjct: 333 YETSILPYED 342


>gi|331002889|ref|ZP_08326402.1| tRNA sulfurtransferase [Lachnospiraceae oral taxon 107 str. F0167]
 gi|330413182|gb|EGG92556.1| tRNA sulfurtransferase [Lachnospiraceae oral taxon 107 str. F0167]
          Length = 394

 Score = 91.5 bits (225), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 60/192 (31%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R  RVE + F                + K++EL    
Sbjct: 180 NGRAMLLLSGGIDSPVAGYMIAKRGVRVEAVYFH------APPYTSERAKIKVIELAQLV 233

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G  ++  +             ++ + I +N   +          +  A  +A   G
Sbjct: 234 SKYTGPVNLHIINF----------TDIQLAIYENCPHDELTIIMRRYMMKIAEKIAVDNG 283

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +        T  A  T         + V  PL+   K E  ++++ I
Sbjct: 284 DQALITGESIGQVASQTIQSLLTTDAAAT---------LPVFRPLIGFDKQEIVEISEKI 334

Query: 188 GGQDLVNLILEE 199
           G  +      E+
Sbjct: 335 GTYETSIQPYED 346


>gi|295399538|ref|ZP_06809520.1| thiamine biosynthesis/tRNA modification protein ThiI [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294979004|gb|EFG54600.1| thiamine biosynthesis/tRNA modification protein ThiI [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 401

 Score = 91.5 bits (225), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 61/192 (31%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A+ R   +E + F                ++K+V+L+ K 
Sbjct: 177 SGKAMLMLSGGIDSPVAGYLAMKRGLEIEAVHFF------SPPFTSERAKQKVVDLVKKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +              V   I         +       L     L  R  
Sbjct: 231 TTYGGTIKLHIVPF----------TEVQQAIYKQVPNEYSLISTRRAMLKITDALRQRHR 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +          + +E+   +   +   +  PL+ + K E   +A+ I
Sbjct: 281 ALAIVTGESLGQVAS---------QTLESMFVINDVTTTPILRPLVSMDKTEIIAIAKKI 331

Query: 188 GGQDLVNLILEE 199
              D+  L  E+
Sbjct: 332 DTHDISILPYED 343


>gi|312109907|ref|YP_003988223.1| thiamine biosynthesis/tRNA modification protein ThiI [Geobacillus
           sp. Y4.1MC1]
 gi|311215008|gb|ADP73612.1| thiamine biosynthesis/tRNA modification protein ThiI [Geobacillus
           sp. Y4.1MC1]
          Length = 401

 Score = 91.5 bits (225), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 61/192 (31%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A+ R   +E + F                ++K+V+L+ K 
Sbjct: 177 SGKAMLMLSGGIDSPVAGYLAMKRGLEIEAVHFF------SPPFTSERAKQKVVDLVKKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +              V   I         +       L     L  R  
Sbjct: 231 TTYGGTIKLHIVPF----------TEVQQAIYKQVPNEYSLISTRRAMLKITDALRQRHR 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +          + +E+   +   +   +  PL+ + K E   +A+ I
Sbjct: 281 ALAIVTGESLGQVAS---------QTLESMFVINDVTTTPILRPLVSMDKTEIIAIAKKI 331

Query: 188 GGQDLVNLILEE 199
              D+  L  E+
Sbjct: 332 DTHDISILPYED 343


>gi|160940891|ref|ZP_02088231.1| hypothetical protein CLOBOL_05783 [Clostridium bolteae ATCC
           BAA-613]
 gi|158436135|gb|EDP13902.1| hypothetical protein CLOBOL_05783 [Clostridium bolteae ATCC
           BAA-613]
          Length = 394

 Score = 91.5 bits (225), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 61/192 (31%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R  +++ + F                ++K+V+L    
Sbjct: 180 NGRAMLLLSGGIDSPVAGYMIAKRGVKIDAVYFH------APPYTSERAKQKVVDLANLV 233

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G  ++  +             ++ + I D               +  A T+A R G
Sbjct: 234 ARYAGPINLHVVNF----------TDIQLYIYDKCPHEELTIIMRRYMMRIAQTIAERTG 283

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +          + +++         + V  P++   K E   +++ I
Sbjct: 284 SIGLITGESIGQVAS---------QTLQSLAATNEVCTMPVFRPVIGFDKQEIVDVSEKI 334

Query: 188 GGQDLVNLILEE 199
           G  +      E+
Sbjct: 335 GTYETSIQPYED 346


>gi|104773809|ref|YP_618789.1| thiamine biosynthesis protein ThiI [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC 11842]
 gi|103422890|emb|CAI97552.1| Thiamine biosynthesis protein ThiI [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC 11842]
          Length = 399

 Score = 91.5 bits (225), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 57/190 (30%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS      A+ R   +E + F                  K  EL      
Sbjct: 173 KAVMMLSGGIDSPVASYLAMKRGVNIEMVHFF------SPPYTSEKALAKAKELTSILAK 226

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G  + + +              +   I++       +  +    L  A  +  +    
Sbjct: 227 YSGRINFIEVPFA----------EIQETIKEKLPEGYLMTVQRRFMLRLADIIREKRHAL 276

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+   +   +   V  P+  + K E    A++IG 
Sbjct: 277 AIFNGESVGQVAS---------QTLESMAAINNVTTTPVLRPVATMDKTEIIAKAEEIGT 327

Query: 190 QDLVNLILEE 199
            DL     E+
Sbjct: 328 FDLSIQPFED 337


>gi|167757696|ref|ZP_02429823.1| hypothetical protein CLOSCI_00026 [Clostridium scindens ATCC 35704]
 gi|167664578|gb|EDS08708.1| hypothetical protein CLOSCI_00026 [Clostridium scindens ATCC 35704]
          Length = 393

 Score = 91.5 bits (225), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 58/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R   +E   F                ++K+V+L    
Sbjct: 180 NGKAMLLLSGGIDSPVAGYMISKRGVGIEATYFH------APPYTSERAKQKVVDLARIV 233

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +             ++ + I D    +          +  A   A + G
Sbjct: 234 SRYSGSVKLHVVNF----------TDIQLYIYDQCPHDELTIIMRRYMMRIAEHFAKKDG 283

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +          + +++         V V+ P++   K E   +A+ I
Sbjct: 284 CLGLITGESIGQVAS---------QTMQSLAATNDVCTVPVYRPVIGFDKQEIVDIAEKI 334

Query: 188 GGQDLVNLILEE 199
           G  +      E+
Sbjct: 335 GTYETSIQPFED 346


>gi|158320842|ref|YP_001513349.1| thiamine biosynthesis/tRNA modification protein ThiI [Alkaliphilus
           oremlandii OhILAs]
 gi|189030617|sp|A8MHS1|THII_ALKOO RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|158141041|gb|ABW19353.1| thiamine biosynthesis/tRNA modification protein ThiI [Alkaliphilus
           oremlandii OhILAs]
          Length = 392

 Score = 91.5 bits (225), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 57/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              ALLL SGG DS         R   +E + F                ++K+++L    
Sbjct: 178 NGKALLLLSGGIDSPVAGWMVGKRGVDIEAIHFH------SYPFTSDRAKEKVMDLAKIL 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  + +L           +  +I +               +  A  +A +  
Sbjct: 232 SGYCGAFKLYSVNLL----------PIQKEINEKCPEEEMTILSRRFMMKIAERVALQND 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +       +   +            + V  PL+ + K +   L+Q I
Sbjct: 282 CDALVTGESIGQVASQTVKSLNVTNSA---------VDLPVFRPLIAMDKVDIIDLSQKI 332

Query: 188 GGQDLVNLILEE 199
              +   L  E+
Sbjct: 333 ETYETSILPFED 344


>gi|291559327|emb|CBL38127.1| thiazole biosynthesis/tRNA modification protein ThiI
           [butyrate-producing bacterium SSC/2]
          Length = 392

 Score = 91.5 bits (225), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 55/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R   ++   F                ++K+++L    
Sbjct: 179 NGKAMLLLSGGIDSPVAGYMIAKRGVHIDATYFH------APPYTSERAKQKVIDLAKIV 232

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G  ++  +             ++ + I +               +  A   A   G
Sbjct: 233 AKYAGPINLHVVNF----------TDIQLAIYEKCPHEELTIIMRRYMMKIAEHFANEGG 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +          + I          ++ V  P + + K E   +A+ I
Sbjct: 283 SLALITGESIGQVAS---------QTIHNLAITNEVCNMPVFRPCIGMDKQEIVDIAEKI 333

Query: 188 GGQDLVNLILEE 199
           G  +      E+
Sbjct: 334 GTFETSIQPFED 345


>gi|167767376|ref|ZP_02439429.1| hypothetical protein CLOSS21_01895 [Clostridium sp. SS2/1]
 gi|317497458|ref|ZP_07955778.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167711351|gb|EDS21930.1| hypothetical protein CLOSS21_01895 [Clostridium sp. SS2/1]
 gi|316895244|gb|EFV17406.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 392

 Score = 91.5 bits (225), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 55/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R   ++   F                ++K+++L    
Sbjct: 179 NGKAMLLLSGGIDSPVAGYMIAKRGVHIDATYFH------APPYTSERAKQKVIDLAKIV 232

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G  ++  +             ++ + I +               +  A   A   G
Sbjct: 233 AKYAGPINLHVVNF----------TDIQLAIYEKCPHEELTIIMRRYMMKIAEHFANEGG 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +          + I          ++ V  P + + K E   +A+ I
Sbjct: 283 SLALITGESIGQVAS---------QTIHNLAITNEVCNMPVFRPCIGMDKQEIVDIAEKI 333

Query: 188 GGQDLVNLILEE 199
           G  +      E+
Sbjct: 334 GTFETSIQPFED 345


>gi|269119357|ref|YP_003307534.1| thiamine biosynthesis/tRNA modification protein ThiI [Sebaldella
           termitidis ATCC 33386]
 gi|268613235|gb|ACZ07603.1| thiamine biosynthesis/tRNA modification protein ThiI [Sebaldella
           termitidis ATCC 33386]
          Length = 388

 Score = 91.5 bits (225), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 55/194 (28%), Gaps = 26/194 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+L SGG DS         R   V  ++F                 +K+ EL      
Sbjct: 177 KGLVLLSGGIDSPVAAFMMAKRGMFVNAVTFH------SFPFTSTQALEKVKELTEILSL 230

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            + +  +  + IL           +  +I               + +  A  LA   G  
Sbjct: 231 YIPKTRLFSMNILK----------IQQEINQKTNKELATILTRRVMMRLAEKLAKSRGYG 280

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++ G      +           A            + V  PL+ + K E   +A +I  
Sbjct: 281 ALITGESLGQVASQTIGGLTCTNASVKD--------IPVFRPLIGMDKTEIMDIAAEIDT 332

Query: 190 QDLVNLILEESHTC 203
            +      E+  +C
Sbjct: 333 YEKSIEPYED--SC 344


>gi|323464204|gb|ADX76357.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus pseudintermedius ED99]
          Length = 406

 Score = 91.5 bits (225), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 61/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                ++K++EL     +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHFH------SPPFTSEKAKEKVIELTRIMAE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              V  +I         +     + L  A  + Y++G  
Sbjct: 233 RVGSIRLHIVPF----------TEVQKQIHKVVHERYTMTSTRRMMLRIADKVVYQIGAD 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +         I A+             +  PL+ L K E  + A+DIG 
Sbjct: 283 AIVNGENLGQVASQTLKSMYAINAVTNT---------PILRPLLSLDKEEIVQKAKDIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 FETSIQPYED 343


>gi|319892763|ref|YP_004149638.1| Thiamine biosynthesis protein thiI [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317162459|gb|ADV06002.1| Thiamine biosynthesis protein thiI [Staphylococcus pseudintermedius
           HKU10-03]
          Length = 406

 Score = 91.5 bits (225), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 61/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                ++K++EL     +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHFH------SPPFTSEKAKEKVIELTRIMAE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              V  +I         +     + L  A  + Y++G  
Sbjct: 233 RVGSIRLHIVPF----------TEVQKQIHKVVHERYTMTSTRRMMLRIADKVVYQIGAD 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +         I A+             +  PL+ L K E  + A+DIG 
Sbjct: 283 AIVNGENLGQVASQTLKSMYAINAVTNT---------PILRPLLSLDKEEIVQKAKDIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 FETSIQPYED 343


>gi|300811345|ref|ZP_07091842.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           delbrueckii subsp. bulgaricus PB2003/044-T3-4]
 gi|300497709|gb|EFK32734.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           delbrueckii subsp. bulgaricus PB2003/044-T3-4]
 gi|325125473|gb|ADY84803.1| Thiazole biosynthesis protein [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 405

 Score = 91.5 bits (225), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 57/190 (30%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS      A+ R   +E + F                  K  EL      
Sbjct: 179 KAVMMLSGGIDSPVASYLAMKRGVNIEMVHFF------SPPYTSEKALAKAKELTSILAK 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G  + + +              +   I++       +  +    L  A  +  +    
Sbjct: 233 YSGRINFIEVPFA----------EIQETIKEKLPEGYLMTVQRRFMLRLADIIREKRHAL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+   +   +   V  P+  + K E    A++IG 
Sbjct: 283 AIFNGESVGQVAS---------QTLESMAAINDVTTTPVLRPVATMDKTEIIAKAEEIGT 333

Query: 190 QDLVNLILEE 199
            DL     E+
Sbjct: 334 FDLSIQPFED 343


>gi|239828051|ref|YP_002950675.1| thiamine biosynthesis protein ThiI [Geobacillus sp. WCH70]
 gi|259518562|sp|C5D693|THII_GEOSW RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|239808344|gb|ACS25409.1| thiamine biosynthesis/tRNA modification protein ThiI [Geobacillus
           sp. WCH70]
          Length = 401

 Score = 91.5 bits (225), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 62/192 (32%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A+ R   +E + F                ++K+++L+ K 
Sbjct: 177 SGKAMLMLSGGIDSPVAGYLAMKRGLEIEAVHFF------SPPFTSDRAKQKVIDLVKKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  +              V   I         +       L     L  R  
Sbjct: 231 TTYGGKIKLHIVPF----------TEVQQAIYTQVPNEYSLISTRRAMLKITDALRQRHR 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +          + +E+   +   +   +  PL+ + K E   +A+ I
Sbjct: 281 ALAIVTGESLGQVAS---------QTLESMFVINDVTTTPILRPLVSMDKIEIIDIAKKI 331

Query: 188 GGQDLVNLILEE 199
              D+  L  E+
Sbjct: 332 DTHDISILPYED 343


>gi|148982372|ref|ZP_01816737.1| predicted aluminum resistance protein [Vibrionales bacterium
           SWAT-3]
 gi|145960508|gb|EDK25874.1| predicted aluminum resistance protein [Vibrionales bacterium
           SWAT-3]
          Length = 86

 Score = 91.5 bits (225), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 9/92 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             A+++FSGGQDS+TCL  AL  +D V  ++FDYGQR+K+E+E    + K++        
Sbjct: 2   KKAVVVFSGGQDSTTCLVQALKEYDEVHAITFDYGQRHKLEIEVAESLAKELGVKA---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQD 100
                  ++ + +L +++ SSLT++      +
Sbjct: 58  -----HKVMDVTLLNELAISSLTRDDIPVSHE 84


>gi|242374005|ref|ZP_04819579.1| thiamine biosynthesis protein [Staphylococcus epidermidis
           M23864:W1]
 gi|242348256|gb|EES39858.1| thiamine biosynthesis protein [Staphylococcus epidermidis
           M23864:W1]
          Length = 407

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 59/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                + K++EL     +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMKRGVTIEAIHFH------SPPFTSEKAKDKVIELTRILSE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              +  +I     P   +     I +  A    +++G  
Sbjct: 233 RVGPIKLHIVPF----------TELQKQINKVVHPRYTMTSTRRIMMRVADAFVHKIGAH 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +                  +   +   V  PL+ L K +  K A++IG 
Sbjct: 283 AIVNGENLGQVASQTLKSMY---------AINHVTSTPVLRPLLTLDKEDIIKKAKEIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 FETSIQPFED 343


>gi|323483781|ref|ZP_08089161.1| hypothetical protein HMPREF9474_00910 [Clostridium symbiosum
           WAL-14163]
 gi|323402972|gb|EGA95290.1| hypothetical protein HMPREF9474_00910 [Clostridium symbiosum
           WAL-14163]
          Length = 392

 Score = 91.5 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 56/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R   +E   F                ++K+++L    
Sbjct: 180 NGKAMLLLSGGIDSPVAGYMIAKRGVTIEATYFH------APPYTSERAKQKVIDLAKLV 233

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +             ++ + I D               +  A  LA + G
Sbjct: 234 SRYSGPIKLHVVNF----------TDIQLYIYDKCPHEELTIIMRRYMMKIAEELAMKDG 283

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +          + + +         + V  P++   K E   ++Q I
Sbjct: 284 CLGLITGESIGQVAS---------QTVHSLAVTNEVCTLPVFRPVIGFDKQEIVDISQKI 334

Query: 188 GGQDLVNLILEE 199
           G  +      E+
Sbjct: 335 GTFETSIEPFED 346


>gi|325684333|gb|EGD26502.1| thiamine biosynthesis protein ThiI [Lactobacillus delbrueckii
           subsp. lactis DSM 20072]
          Length = 405

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 57/190 (30%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS      A+ R   +E + F                  K  EL      
Sbjct: 179 KAVMMLSGGIDSPVASYLAMKRGVNIEMVHFF------SPPYTSEKALAKAKELTSVLAK 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G  + + +              +   I++       +  +    L  A  +  +    
Sbjct: 233 YSGRINFIEVPFA----------EIQETIKEKLPEGYLMTVQRRFMLRLADIIREKRHAL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+   +   +   V  P+  + K E    A++IG 
Sbjct: 283 AIFNGESVGQVAS---------QTLESMAAINDVTTTPVLRPVATMDKTEIIAKAEEIGT 333

Query: 190 QDLVNLILEE 199
            DL     E+
Sbjct: 334 FDLSIQPFED 343


>gi|317122116|ref|YP_004102119.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thermaerobacter marianensis DSM 12885]
 gi|315592096|gb|ADU51392.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thermaerobacter marianensis DSM 12885]
          Length = 407

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 59/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A  L SGG DS   +  A+ R   V  + F                R+K+V+L      
Sbjct: 191 RACALLSGGIDSPVAVWMAMKRGLSVIPVHFH------SPPFTSERAREKVVDLTRVLAR 244

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G                     V   IQ    P   +     +    A  +A R    
Sbjct: 245 WGGAM----------PLWVVHFTEVQRAIQLECPPELTITLMRRMMFRIAERIAARERAL 294

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      +        TI A+ T         + V  PL+ + K E  + A+ IG 
Sbjct: 295 ALVTGESLGQVASQTLESIRTISAVAT---------LPVLRPLIGMDKTEIVERARAIGT 345

Query: 190 QDLVNLILEE 199
            D+  L  E+
Sbjct: 346 YDISILPYED 355


>gi|291087075|ref|ZP_06571794.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           sp. M62/1]
 gi|291076393|gb|EFE13757.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           sp. M62/1]
          Length = 391

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 55/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R   +E   F                ++K+++L    
Sbjct: 179 NGKAMLLLSGGIDSPVAGYMIAKRGVIIEATYFH------APPYTSERAKQKVIDLAKIV 232

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +             ++ + I D               +  A  +A +  
Sbjct: 233 ARYSGPIKLHVVNF----------TDIQLYIYDKCPHEELTIIMRRYMMKIAEEIAKKDE 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +          + + +         + V  P++   K +   ++Q I
Sbjct: 283 CLGLITGESIGQVAS---------QTVHSLAVTNEVCTLPVFRPVIGFDKQDIVDISQKI 333

Query: 188 GGQDLVNLILEE 199
           G  +      E+
Sbjct: 334 GTFETSIQPYED 345


>gi|314936185|ref|ZP_07843532.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus hominis subsp. hominis C80]
 gi|313654804|gb|EFS18549.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus hominis subsp. hominis C80]
          Length = 407

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 60/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL  SGG DS       + R  ++E + F                + K++EL     +
Sbjct: 179 KTLLQLSGGIDSPVAGMEIMKRGVKIEAIHFH------SPPFTSEKAKDKVIELTRILSE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              +  +I  +  P   +     + L     +  R+G  
Sbjct: 233 RVGPIKLHIVPF----------TALQKQINKSVHPRYTMTSTRRMMLRVTDIILERIGAN 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +                  +   +   +  PL+ L K +  K A++IG 
Sbjct: 283 AIVNGENLGQVASQTLKSMY---------AINDVTSTPILRPLISLDKEDIIKKAKEIGT 333

Query: 190 QDLVNLILEE 199
            ++     E+
Sbjct: 334 FEVSIQPYED 343


>gi|228474506|ref|ZP_04059239.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus hominis SK119]
 gi|228271535|gb|EEK12897.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus hominis SK119]
          Length = 407

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 60/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL  SGG DS       + R  ++E + F                + K++EL     +
Sbjct: 179 KTLLQLSGGIDSPVAGMEIMKRGVKIEAIHFH------SPPFTSEKAKDKVIELTRILSE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              +  +I  +  P   +     + L     +  R+G  
Sbjct: 233 RVGPIKLHIVPF----------TALQKQINKSVHPRYTMTSTRRMMLRVTDIILERIGAN 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +                  +   +   +  PL+ L K +  K A++IG 
Sbjct: 283 AIVNGENLGQVASQTLKSMY---------AINDVTSTPILRPLISLDKEDIIKKAKEIGT 333

Query: 190 QDLVNLILEE 199
            ++     E+
Sbjct: 334 FEVSIQPYED 343


>gi|289550529|ref|YP_003471433.1| Thiamine biosynthesis protein thiI [Staphylococcus lugdunensis
           HKU09-01]
 gi|289180061|gb|ADC87306.1| Thiamine biosynthesis protein thiI [Staphylococcus lugdunensis
           HKU09-01]
          Length = 407

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 61/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                ++K++EL      
Sbjct: 179 KTLLMLSGGIDSPVAGIEVMRRGVTIEAIHFH------SPPFTSEKAKEKVIELTRIMSQ 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +             N+  +I     P   +     + +  A  + + +G  
Sbjct: 233 RVGPIKLHIVPF----------TNLQKQINKVVHPRYTMTSTRRMMMRIADKVVHEIGAH 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +                  +   +   V  PL+ L K E  K+A+ IG 
Sbjct: 283 AIVNGENLGQVASQTLKSMY---------AINHVTSTPVLRPLLTLDKEEIVKMARKIGT 333

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 334 YDVSIQPFED 343


>gi|315231182|ref|YP_004071618.1| thiamine biosynthesis ThiI-like protein [Thermococcus barophilus
           MP]
 gi|315184210|gb|ADT84395.1| thiamine biosynthesis ThiI-like protein [Thermococcus barophilus
           MP]
          Length = 365

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 67/194 (34%), Gaps = 25/194 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      + L SGG DS       + R   +  + FD G+  +  +E  + +   + +  
Sbjct: 162 VSTQGKVVALLSGGIDSPVAAFLMMKRGAEIIAVHFDQGKNARKVVEKTVNI---LNDYS 218

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
           P+  + + E+H   L            K   + +   N+         I  L  AA +A 
Sbjct: 219 PRDIELIIENHFEVL------------KPYVVALNRLNMREWTCVVCKIAMLRRAAEIAK 266

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G   IV G      +          + +       M     +H PL+ + K E  ++A
Sbjct: 267 EKGALGIVTGDSLGQVAS---------QTLTNLYFETMSVRFPIHRPLLGMDKEEIIRIA 317

Query: 185 QDIGG-QDLVNLIL 197
           ++IG  Q  +    
Sbjct: 318 REIGTYQAFLEYPY 331


>gi|116513815|ref|YP_812721.1| thiamine biosynthesis protein ThiI [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC BAA-365]
 gi|122275415|sp|Q04B89|THII_LACDB RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|116093130|gb|ABJ58283.1| Thiamine biosynthesis ATP pyrophosphatase [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
          Length = 405

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 57/190 (30%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS      A+ R   +E + F                  K  EL      
Sbjct: 179 KAVMMLSGGIDSPVASYLAMKRGVNIEMVHFF------SPPYTSEKALAKAKELTSILAK 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G  + + +              +   I++       +  +    L  A  +  +    
Sbjct: 233 YSGRINFIEVPFA----------EIQETIKEKLPEGYLMTVQRRFMLRLADIIREKRHAL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+   +   +   V  P+  + K E    A++IG 
Sbjct: 283 AIFNGESVGQVAS---------QTLESMSAINDVTTTPVLRPVATMDKTEIIAKAEEIGT 333

Query: 190 QDLVNLILEE 199
            DL     E+
Sbjct: 334 FDLSIQPFED 343


>gi|238917090|ref|YP_002930607.1| thiamine biosynthesis protein ThiI [Eubacterium eligens ATCC 27750]
 gi|259518555|sp|C4Z0P7|THII_EUBE2 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|238872450|gb|ACR72160.1| thiamine biosynthesis protein ThiI [Eubacterium eligens ATCC 27750]
          Length = 393

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 53/190 (27%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+LL SGG DS         R  ++E   F                ++K+++L      
Sbjct: 182 KAMLLLSGGIDSPVAGYMVAKRGVQIEATYFH------APPYTSERAKQKVIDLAKIVSK 235

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G   +  +             ++ M I +    +          +  A  L    G  
Sbjct: 236 YSGPITLNVVNF----------TDIQMAIYEKCPHDELTIIMRRYMMKIAEDLGKSSGCQ 285

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      +                        + V  P++   K E   +++ IG 
Sbjct: 286 GLVTGESIGQVASQTMASLYCTN---------EVCTMPVFRPVIGFDKQEIIDISEKIGS 336

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 337 YETSIQPFED 346


>gi|196249957|ref|ZP_03148652.1| thiamine biosynthesis/tRNA modification protein ThiI [Geobacillus
           sp. G11MC16]
 gi|196210471|gb|EDY05235.1| thiamine biosynthesis/tRNA modification protein ThiI [Geobacillus
           sp. G11MC16]
          Length = 403

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 68/192 (35%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A+ R   +E + F                ++K+++L+ K 
Sbjct: 179 SGKAMLMLSGGIDSPVAGYLAMKRGLEIEAVHFF------SPPFTSERAKQKVIDLVRKL 232

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  +           T+      Q      + +  R  +  +  A    + G
Sbjct: 233 TAYGGKIKLHIVPF---------TEVQQAIYQGVPNEYSLISTRRAMLKITDALRRRQRG 283

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +         S          + +E+   +   ++  V  PL+ + K E  ++A+ I
Sbjct: 284 LAIVTGESLGQVAS----------QTLESMYVINEVTNTPVLRPLISMDKMEIIEIAKQI 333

Query: 188 GGQDLVNLILEE 199
              D+  L  E+
Sbjct: 334 DTHDISILPYED 345


>gi|138896335|ref|YP_001126788.1| thiamine biosynthesis protein ThiI [Geobacillus thermodenitrificans
           NG80-2]
 gi|189030630|sp|A4IRT9|THII_GEOTN RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|134267848|gb|ABO68043.1| Thiamine biosynthesis protein ThiI [Geobacillus thermodenitrificans
           NG80-2]
          Length = 401

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 68/192 (35%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A+ R   +E + F                ++K+++L+ K 
Sbjct: 177 SGKAMLMLSGGIDSPVAGYLAMKRGLEIEAVHFF------SPPFTSERAKQKVIDLVRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  +           T+      Q      + +  R  +  +  A    + G
Sbjct: 231 TAYGGKIKLHIVPF---------TEVQQAIYQGVPNEYSLISTRRAMLKITDALRRRQRG 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +         S          + +E+   +   ++  V  PL+ + K E  ++A+ I
Sbjct: 282 LAIVTGESLGQVAS----------QTLESMYVINEVTNTPVLRPLISMDKMEIIEIAKQI 331

Query: 188 GGQDLVNLILEE 199
              D+  L  E+
Sbjct: 332 DTHDISILPYED 343


>gi|310828212|ref|YP_003960569.1| thiamine biosynthesis/tRNA modification protein ThiI [Eubacterium
           limosum KIST612]
 gi|308739946|gb|ADO37606.1| thiamine biosynthesis/tRNA modification protein ThiI [Eubacterium
           limosum KIST612]
          Length = 385

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 55/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +    LL SGG DS         R   +  + F                + K+++L    
Sbjct: 173 SGKTALLLSGGIDSPVAGYMMAKRGVELIGVYFH------SFPFTSDRAKDKVIDLAKIV 226

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  +              +  KI +               +  A  +A R G
Sbjct: 227 SGYCGKVTLYVVPF----------TEIQTKIVEVCPERQTTIIIRRYMMRIAQEIARRNG 276

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             ++  G      +           A+           + V  PL+ + K E   +A+ I
Sbjct: 277 AMSLTTGESLGQVASQTQEGLGATNAV---------VDLPVFRPLIGMDKQEIVAIAERI 327

Query: 188 GGQDLVNLILEE 199
           G  +   L  E+
Sbjct: 328 GTFETSILPYED 339


>gi|229828425|ref|ZP_04454494.1| hypothetical protein GCWU000342_00486 [Shuttleworthia satelles DSM
           14600]
 gi|229793019|gb|EEP29133.1| hypothetical protein GCWU000342_00486 [Shuttleworthia satelles DSM
           14600]
          Length = 401

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 55/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R   ++   F                ++K+++L  + 
Sbjct: 181 NGKAMLLLSGGIDSPVAGWMIAKRGVTLDATYFH------APPYTSERAKQKVIDLAEQV 234

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +             ++ + I +    +          +  A   A    
Sbjct: 235 ARYAGPIRLHIVNF----------TDIQLYIYEQCPHDELTIIMRRYMMRIAEHFARENA 284

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +           A+           + V+ PL+   K +   +A+ I
Sbjct: 285 CMGLITGESIGQVASQTMQSLLCTNAVCQ---------LPVYRPLIGFDKQDIVSIAEKI 335

Query: 188 GGQDLVNLILEE 199
              +   L  E+
Sbjct: 336 DTYETSILPYED 347


>gi|226324637|ref|ZP_03800155.1| hypothetical protein COPCOM_02422 [Coprococcus comes ATCC 27758]
 gi|225207085|gb|EEG89439.1| hypothetical protein COPCOM_02422 [Coprococcus comes ATCC 27758]
          Length = 393

 Score = 91.1 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 61/192 (31%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             +A+LL SGG DS         R   +E   F                ++K+V+L  + 
Sbjct: 180 NGTAMLLLSGGIDSPVAGYMISKRGVGLEATYFH------APPYTSERAKQKVVDLAKQV 233

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +             ++ + I +    +          +  A   A   G
Sbjct: 234 SKYTGPIKLHVVNF----------TDIQLYIYEKCPHDELTIIMRRYMMRIAEHFAKEDG 283

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +          + +++ +       + V+ PL+   K E   +++ I
Sbjct: 284 CLGLITGESIGQVAS---------QTMQSLMATNDVCTLPVYRPLIGFDKQEIVDISEKI 334

Query: 188 GGQDLVNLILEE 199
           G  +   L  E+
Sbjct: 335 GTYETSILPYED 346


>gi|297529046|ref|YP_003670321.1| thiamine biosynthesis/tRNA modification protein ThiI [Geobacillus
           sp. C56-T3]
 gi|297252298|gb|ADI25744.1| thiamine biosynthesis/tRNA modification protein ThiI [Geobacillus
           sp. C56-T3]
          Length = 402

 Score = 90.7 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      ++ R   +E + F                ++K+++L+ K 
Sbjct: 178 SGKAMLMLSGGIDSPVAGYLSMKRGLEIEAVHFF------SPPFTSERAKQKVIDLVRKL 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +              V   I         +       L     L  R  
Sbjct: 232 TTYGGRIKLHIVPF----------TEVQQAIYQGVPNEYSLISTRRAMLRITDALRRRQR 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I  +             +  PL+ + K E  +LA+ I
Sbjct: 282 ALAIVTGESLGQVASQTLESMYVINEVTNT---------PILRPLVSMDKLEIIELAKQI 332

Query: 188 GGQDLVNLILEE 199
           G  D+  L  E+
Sbjct: 333 GTHDISILPYED 344


>gi|261418192|ref|YP_003251874.1| thiamine biosynthesis protein ThiI [Geobacillus sp. Y412MC61]
 gi|319767848|ref|YP_004133349.1| thiamine biosynthesis/tRNA modification protein ThiI [Geobacillus
           sp. Y412MC52]
 gi|261374649|gb|ACX77392.1| thiamine biosynthesis/tRNA modification protein ThiI [Geobacillus
           sp. Y412MC61]
 gi|317112714|gb|ADU95206.1| thiamine biosynthesis/tRNA modification protein ThiI [Geobacillus
           sp. Y412MC52]
          Length = 402

 Score = 90.7 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      ++ R   +E + F                ++K+++L+ K 
Sbjct: 178 SGKAMLMLSGGIDSPVAGYLSMKRGLEIEAVHFF------SPPFTSERAKQKVIDLVRKL 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +              V   I         +       L     L  R  
Sbjct: 232 TTYGGRIKLHIVPF----------TEVQQAIYQGVPNEYSLISTRRAMLRITDALRRRQR 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I  +             +  PL+ + K E  +LA+ I
Sbjct: 282 ALAIVTGESLGQVASQTLESMYVINEVTNT---------PILRPLVSMDKLEIIELAKQI 332

Query: 188 GGQDLVNLILEE 199
           G  D+  L  E+
Sbjct: 333 GTHDISILPYED 344


>gi|15615765|ref|NP_244069.1| thiamin biosynthesis [Bacillus halodurans C-125]
 gi|10175826|dbj|BAB06922.1| thiamin biosynthesis [Bacillus halodurans C-125]
          Length = 382

 Score = 90.7 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 63/192 (32%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   LL+ SGG DS     + L R   +E + F                ++K+V+L  K 
Sbjct: 157 SGKVLLMLSGGIDSPVAGYYLLKRGVTLEAIHFH------SPPFTNEKAKQKVVDLAAKL 210

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +  G+  +  +              +   I +    N  +     + L  +  +A +  
Sbjct: 211 TNFGGQVKLHIVPF----------TELQKHIHEKVPSNMEMTIMRRMMLRISEGIAKKTD 260

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I  G      +       +          +   +   V  PL+ + K E   +A++I
Sbjct: 261 ALAIATGESLGQVASQTLHSMN---------TINEVTTTPVLRPLLTMDKEEVITVAKEI 311

Query: 188 GGQDLVNLILEE 199
              ++  L  E+
Sbjct: 312 DTFNISILPYED 323


>gi|20140834|sp|Q9K804|THII_BACHD RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
          Length = 404

 Score = 90.7 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 63/192 (32%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   LL+ SGG DS     + L R   +E + F                ++K+V+L  K 
Sbjct: 179 SGKVLLMLSGGIDSPVAGYYLLKRGVTLEAIHFH------SPPFTNEKAKQKVVDLAAKL 232

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +  G+  +  +              +   I +    N  +     + L  +  +A +  
Sbjct: 233 TNFGGQVKLHIVPF----------TELQKHIHEKVPSNMEMTIMRRMMLRISEGIAKKTD 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I  G      +       +          +   +   V  PL+ + K E   +A++I
Sbjct: 283 ALAIATGESLGQVASQTLHSMN---------TINEVTTTPVLRPLLTMDKEEVITVAKEI 333

Query: 188 GGQDLVNLILEE 199
              ++  L  E+
Sbjct: 334 DTFNISILPYED 345


>gi|257483227|ref|ZP_05637268.1| hypothetical protein PsyrptA_08217 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|331012455|gb|EGH92511.1| hypothetical protein PSYTB_22846 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 377

 Score = 90.7 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 66/231 (28%), Gaps = 18/231 (7%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            + LFSGG DS       L +  R   +S  Y    + ++  R  +  K+    P     
Sbjct: 87  CVSLFSGGMDSGIGALDLLAKGRRPLLISHAYRGDAEKQIFVRDHLPVKVSRFAPVA--- 143

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                  PL++LG  +   +       +    L  + +    +        +     I  
Sbjct: 144 ------HPLSLLGKSTDVQMRTRSFNFLAYGVLVGSTLAQLRVTGKPVELFVPENGLIAL 197

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
                     S      H     +   I   +   V V  P     K E      +    
Sbjct: 198 NPPMTPRRIGSLSTRTTHPHFLGLFQQILDVVGLPVLVTNPYALKTKGEML---LECSDG 254

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK-YQD 240
             ++ ++ E+ +C      K       C  C  C +R+  +       Y D
Sbjct: 255 ASLDSLVSETVSC-----GKWKRSHQQCGKCVPCIIRRASFHAAGIPDYTD 300


>gi|15896224|ref|NP_349573.1| thiamine biosynthesis protein ThiI [Clostridium acetobutylicum ATCC
           824]
 gi|20140711|sp|Q97EY4|THII_CLOAB RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|15026026|gb|AAK80913.1|AE007794_5 Thiamine biosynthesis enzyme, THII [Clostridium acetobutylicum ATCC
           824]
 gi|325510379|gb|ADZ22015.1| Thiamine biosynthesis enzyme, THII [Clostridium acetobutylicum EA
           2018]
          Length = 384

 Score = 90.7 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 61/194 (31%), Gaps = 25/194 (12%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K     LL+ SGG DS         R   V  + F                + K+ +L  
Sbjct: 169 KTNGQTLLMLSGGIDSPVAGYMMARRGVEVSGVYFH------SAPYTSERAKDKVKDLAR 222

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                +GE  +  +             ++ M+I +    +          +  A  +A  
Sbjct: 223 ILTKYIGEMTLYVVPF----------TDIQMQIIEKCREDELTIIMRRFMMSIACKIAED 272

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G+ ++  G      +          + ++  +     +   V  PL+ + K +   +++
Sbjct: 273 KGMESVATGESIGQVAS---------QTMQGLVVSNDCADRPVFRPLISMDKIDIMDISR 323

Query: 186 DIGGQDLVNLILEE 199
            IG  +   L  E+
Sbjct: 324 KIGTYETSILPYED 337


>gi|257460681|ref|ZP_05625782.1| queuosine biosynthesis protein QueC [Campylobacter gracilis RM3268]
 gi|257442012|gb|EEV17154.1| queuosine biosynthesis protein QueC [Campylobacter gracilis RM3268]
          Length = 391

 Score = 90.7 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 53/156 (33%), Positives = 73/156 (46%), Gaps = 15/156 (9%)

Query: 84  DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGY 143
             S S      + +   ++LP+T+VP RN +FL  AA LA +     I IGV + D SGY
Sbjct: 240 SQSQSDKISPSSGESAFSDLPSTYVPFRNGVFLSIAAALAEKERCDAIFIGVVQEDSSGY 299

Query: 144 PDCRHDTIRAIETAINLGMESHVT--VHTPLMWLKKYETWKLAQDIGGQDLVNLILEESH 201
           PDC    I A E A+ LG        + TPL+ L K +   LA +IG      + LE + 
Sbjct: 300 PDCGASFIAAFERALELGTSRDFHPRIKTPLVHLSKAQIVSLALEIG------VPLELTW 353

Query: 202 TCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +CY  +          C  C +C LR KG+     K
Sbjct: 354 SCYEREDA-------ACGLCDSCLLRLKGFAGAGAK 382



 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 1/61 (1%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMPKWK 68
           AL + SGG DS+TC   A      +  L FDY QR    E EC   +   +        
Sbjct: 2  RALCVISGGMDSATCAYIARREGYEIVALHFDYDQRTMGKERECFGKICDDLGVAKRLIL 61

Query: 69 D 69
          D
Sbjct: 62 D 62


>gi|160915191|ref|ZP_02077404.1| hypothetical protein EUBDOL_01199 [Eubacterium dolichum DSM 3991]
 gi|158432990|gb|EDP11279.1| hypothetical protein EUBDOL_01199 [Eubacterium dolichum DSM 3991]
          Length = 405

 Score = 90.7 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 57/190 (30%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL++ SGG DS       + R   +E + +                + K++EL      
Sbjct: 183 KALVMLSGGIDSPVAGYLTMKRGIAIECIHY------ASPPYTSKAAQDKVLELARLIAP 236

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G   +  +             ++ + I  N   +  +     +    A  +  +    
Sbjct: 237 YQGHIRVHIVPF----------TDLQLAIYKNCDESYAITIMRRMMYRIAEKICEKQNAL 286

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +                  +   + + V  P+  + K E   LA+ IG 
Sbjct: 287 AIVNGESIGQVASQTLESMQ---------TINCVTQLPVIRPVACMDKLEIIDLAKHIGT 337

Query: 190 QDLVNLILEE 199
            +   L  E+
Sbjct: 338 YETSILPFED 347


>gi|171463094|ref|YP_001797207.1| exsB protein [Polynucleobacter necessarius subsp. necessarius
           STIR1]
 gi|171192632|gb|ACB43593.1| exsB protein [Polynucleobacter necessarius subsp. necessarius
           STIR1]
          Length = 208

 Score = 90.7 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 53/193 (27%), Positives = 80/193 (41%), Gaps = 23/193 (11%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS+T L+ A D       LS  YGQR+  EL     + K+I     +  +       L 
Sbjct: 22  IDSTTVLALAKDSDYTPYALSVGYGQRHSSELAAAKHIAKQIGVARHEVVN-------LD 74

Query: 79  LAILGDISHSSLTKNVAMKI-QDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCE 137
           L   G  + +     V     +D+ +P T+VP RN I L  A      LG  +I  G   
Sbjct: 75  LTRFGGSALTDTKIAVPTSPGKDHEIPVTYVPARNTILLSLALGWTESLGGLDIFYGANS 134

Query: 138 TDYSGYPDCRHDTIRAIETAINLG---------MESHVTVHTPLMWLKKYETWKLAQDIG 188
            DYSGYPDCR + + + E   NL           ++   VH P++ L K +  +L   +G
Sbjct: 135 VDYSGYPDCRPECVASFEHMANLATKAGVEAINNKNRFRVHAPIVSLTKAQIIQLGSTMG 194

Query: 189 GQDLVNLILEESH 201
                 +   ++ 
Sbjct: 195 ------VDYSQTV 201


>gi|212224002|ref|YP_002307238.1| Hypothetical thiI [Thermococcus onnurineus NA1]
 gi|212008959|gb|ACJ16341.1| Hypothetical thiI [Thermococcus onnurineus NA1]
          Length = 363

 Score = 90.7 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 64/189 (33%), Gaps = 25/189 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   +  + FD G       +    V +K VE++  +  
Sbjct: 167 KVVVLLSGGIDSPVAAFLMMKRGAEIIAVHFDQG-------KNAKNVVEKTVEILNDYSP 219

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E  +         +H  + +     +   N+         +  L  AA +A   G  
Sbjct: 220 KDIELIV--------ENHFEVLRPYVAVLSRINMLEWTCVLCKVAMLRRAAEIAREEGAL 271

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + +       M     VH PL+ + K E  K+A++IG 
Sbjct: 272 GIVTGDSLGQVAS---------QTLANLYFETMSVRFPVHRPLLGMDKEEIVKIAREIGT 322

Query: 190 -QDLVNLIL 197
            Q  +    
Sbjct: 323 YQAFLEYPY 331


>gi|197104888|ref|YP_002130265.1| hypothetical protein PHZ_c1423 [Phenylobacterium zucineum HLK1]
 gi|196478308|gb|ACG77836.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
          Length = 456

 Score = 90.7 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 65/231 (28%), Gaps = 22/231 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDY-GQRNKVELECRLCVRKKI-VELMPKWK 68
           ++ LFSGG DS       L        +S  + G  +  +  C   + K+   +     +
Sbjct: 151 SVCLFSGGLDSFIGAIDLLADGKAPMLVSHYWDGITSTHQTYCADVIAKRFPKQRFHHLR 210

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG- 127
             +G  + L     G+ +            +  +     +       L          G 
Sbjct: 211 ARVGFPNDLVDGSAGENTL-----------RGRSFLFFALAAMAADALGVGLIHVPENGL 259

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I+  V        +      H    A    I  G+   + +     +  K    K   D 
Sbjct: 260 ISLNVPLDPTRLGALSTRTTHPFYMARFDEILDGLGLPIRLENRYRFQTKGVMAKNCAD- 318

Query: 188 GGQDLVNLILEESHTCYLGKRDKR-----YEWGYGCNSCPACYLRQKGWME 233
               L+N     + +C    + +            C  C  C +R+   +E
Sbjct: 319 --AALLNKEARHTMSCSSPAKARWAKDEDARQPKHCGHCVPCLIRRAAMVE 367


>gi|70726211|ref|YP_253125.1| thiamine biosynthesis protein ThiI [Staphylococcus haemolyticus
           JCSC1435]
 gi|123660461|sp|Q4L756|THII_STAHJ RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|68446935|dbj|BAE04519.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 407

 Score = 90.7 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 60/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                + K++EL     +
Sbjct: 179 KTLLMLSGGIDSPVAGMEIMKRGVYIEAIHFH------SPPFTSEKAKDKVIELTRILSE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              +  +I     P   +     + L  A  +  ++G  
Sbjct: 233 RVGPIKLHIVPF----------TELQKQINKVVHPRYTMTSTRRMMLRVADIVLEKVGAN 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +                  +   +   +  PL+ L K +  K A++IG 
Sbjct: 283 AIVNGENLGQVASQTLKSMY---------AINDVTSTPILRPLVSLDKEDIVKKAREIGT 333

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 334 FDVSIQPYED 343


>gi|323478685|gb|ADX83923.1| ExsB family protein [Sulfolobus islandicus HVE10/4]
          Length = 213

 Score = 90.7 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 86/236 (36%), Gaps = 42/236 (17%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-RNKVELECRLCVRKKIV 61
           DI+K     LLLFS G DSS+   +   +    + L  +YGQ   +++L+    + +K+ 
Sbjct: 13  DIMKF----LLLFSSGLDSSSVAYYYAKKGLDFDCLFINYGQSSARMQLKYGKIICEKLK 68

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
             +         +  +    L                     P+  +  RN++ +  A  
Sbjct: 69  RRLIIINAKNLGEAFVNNDWLR--------------------PHEPIIHRNLVIVPIAIA 108

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            A + G   +++   + D    P+ R      +E    LG    V   TP +   KY   
Sbjct: 109 YAKQNGYERVIMATIKEDCEYEPNRR----DIMEKLKELGEILGVRFETPFVNFPKYLLL 164

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           K+    G      L    +++C LG +       Y C  C  C  R + + + K +
Sbjct: 165 KIGIKSG------LDPSLTYSCLLGHK-------YHCGKCSQCLKRIEAFKQAKIR 207


>gi|291458547|ref|ZP_06597937.1| thiamine biosynthesis/tRNA modification protein ThiI [Oribacterium
           sp. oral taxon 078 str. F0262]
 gi|291419080|gb|EFE92799.1| thiamine biosynthesis/tRNA modification protein ThiI [Oribacterium
           sp. oral taxon 078 str. F0262]
          Length = 395

 Score = 90.7 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R   +E   F                ++K+V+L  K 
Sbjct: 182 NGKAMLLLSGGIDSPAAGYMIAKRGALIEACYFH------APPYTSERAKQKVVDLAEKL 235

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +              + + I +    +          +  A  +A +  
Sbjct: 236 SRYAGPVALHVVNF----------TEIQLAIYEKCPHDELTILMRRYMMRIAERIAEKRD 285

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +          + +++ +       + V+ PL+   K E   +A+ I
Sbjct: 286 CIGLITGESIGQVAS---------QTMQSLVCTNEVCRLPVYRPLIAFDKQEIVDIAERI 336

Query: 188 GGQDLVNLILEE 199
           G  +      E+
Sbjct: 337 GTYETSIEPYED 348


>gi|314933867|ref|ZP_07841232.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus caprae C87]
 gi|313654017|gb|EFS17774.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus caprae C87]
          Length = 407

 Score = 90.7 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 60/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                + K++EL     +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMKRGVTIEAIHFH------SPPFTSEKAKDKVIELTRILSE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              +  +I     P   +     + +  +  L +++G  
Sbjct: 233 RVGPIKLHIVPF----------TELQKQINKVVHPRYTMTSTRRMMMRVSDALVHKIGAN 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +                  +   +   V  PL+ L K +  K A+DIG 
Sbjct: 283 AIVNGENLGQVASQTLKSMY---------AINHVTSTPVLRPLLTLDKEDIIKKARDIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 YETSIQPFED 343


>gi|223043602|ref|ZP_03613647.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus capitis SK14]
 gi|222443090|gb|EEE49190.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus capitis SK14]
          Length = 407

 Score = 90.7 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 60/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                + K++EL     +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMKRGVTIEAIHFH------SPPFTSEKAKDKVIELTRILSE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              +  +I     P   +     + +  +  L +++G  
Sbjct: 233 RVGPIKLHIVPF----------TELQKQINKVVHPRYTMTSTRRMMMRVSDALVHKIGAN 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +                  +   +   V  PL+ L K +  K A+DIG 
Sbjct: 283 AIVNGENLGQVASQTLKSMY---------AINHVTSTPVLRPLLTLDKEDIIKKARDIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 YETSIQPFED 343


>gi|190893996|ref|YP_001984290.1| probable succinoglycan biosynthesis transcriptional regulator
           protein [Rhizobium etli CIAT 652]
 gi|190699657|gb|ACE93740.1| probable succinoglycan biosynthesis transcriptional regulator
           protein [Rhizobium etli CIAT 652]
          Length = 191

 Score = 90.7 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 55/213 (25%), Positives = 85/213 (39%), Gaps = 29/213 (13%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV-RKKIVELMPKWKDSLGE 73
            SGG DS+     A++   +V  L  +YGQR              K+  L         E
Sbjct: 1   MSGGLDSTLVAYLAIEEGLKVHPLFVNYGQRAIDRELAACKNSMMKLGIL--------DE 52

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
             I  L+  G +  S LT      ++D      F PGRN++FL+ AA  A+++    + I
Sbjct: 53  LEIADLSGYGRLIRSGLTDPNKHIVED-----AFTPGRNMLFLLTAAAHAHQVNADAVSI 107

Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
           G+   + S +PD     ++  E  I   M   + V  PL    K E  +LA+  G     
Sbjct: 108 GLLHEETSLFPDQTSGFLQDAEALITRIMGRSIKVLAPLAAFHKDEVIQLAKAKGVGG-- 165

Query: 194 NLILEESHTCYLGKRDKRYEWGYGCNSCPACYL 226
                 +++C+LG  +        C  C AC  
Sbjct: 166 ------TYSCHLGLEEP-------CGECIACNE 185


>gi|313123423|ref|YP_004033682.1| tRNA sulfurtransferase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
 gi|312279986|gb|ADQ60705.1| Probable tRNA sulfurtransferase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 405

 Score = 90.4 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 57/190 (30%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS      A+ R   +E + F                  K  +L      
Sbjct: 179 KAVMMLSGGIDSPVASYLAMKRGVNIEMVHFF------SPPYTSEKALAKAKQLTSVLAK 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G  + + +              +   I++       +  +    L  A  +  +    
Sbjct: 233 YSGRINFIEVPFA----------EIQETIKEKLPEGYLMTVQRRFMLRLADIIREKRHAL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+   +   +   V  P+  + K E    A++IG 
Sbjct: 283 AIFNGESVGQVAS---------QTLESMAAINDVTTTPVLRPVATMDKTEIIAKAEEIGT 333

Query: 190 QDLVNLILEE 199
            DL     E+
Sbjct: 334 FDLSIQPFED 343


>gi|291542025|emb|CBL15135.1| thiazole biosynthesis/tRNA modification protein ThiI [Ruminococcus
           bromii L2-63]
          Length = 393

 Score = 90.4 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 55/190 (28%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A +L SGG DS         R  R+  + F                  K+V L+ +   
Sbjct: 180 RAAILISGGLDSPVAAYMMAKRGIRLTAIHF------ASPPYTSPRAEDKVVRLLRRVSR 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+           + ++     +  KI+D      F      + +  +  +A +    
Sbjct: 234 YAGDM----------VMYTVPFTKLQEKIKDECPEELFTIIMRRLMMQISEKIAEKYECQ 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++ G      +                +         V  PL+ + K E   +A  I  
Sbjct: 284 ALITGESLGQVASQTIGALSCTDEATDML---------VFRPLIGMDKQEIIDIAYKIDT 334

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 335 YDISIEPYED 344


>gi|73662357|ref|YP_301138.1| thiamine biosynthesis protein ThiI [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
 gi|123642827|sp|Q49YE8|THII_STAS1 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|72494872|dbj|BAE18193.1| putative thiamine biosynthesis ATP pyrophosphatase [Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305]
          Length = 407

 Score = 90.4 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 59/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   VE + F                ++K++EL      
Sbjct: 179 KTLLMLSGGIDSPVAGIEVMRRGVTVEAIHFH------SPPFTSEKAKEKVIELTRILSG 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +             ++  ++         +     + +  A  + + +   
Sbjct: 233 HVGPIKLHIVPF----------TDLQKQVNKVVHERYTMTSTRRMMMRVADKVVHDIDAH 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +                  +   +   V  PL+ L K +  K A++IG 
Sbjct: 283 AIVNGENLGQVASQTLKSMY---------AINHVTSTPVLRPLLTLDKEDIVKKAKEIGT 333

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 334 FDVSIQPYED 343


>gi|117626464|ref|YP_859787.1| hypothetical protein APECO1_2274 [Escherichia coli APEC O1]
 gi|218561274|ref|YP_002394187.1| hypothetical protein ECS88_4696 [Escherichia coli S88]
 gi|237703781|ref|ZP_04534262.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|283788504|ref|YP_003368369.1| DNA binding protein [Citrobacter rodentium ICC168]
 gi|293416236|ref|ZP_06658876.1| hypothetical protein ECDG_03839 [Escherichia coli B185]
 gi|300949560|ref|ZP_07163554.1| conserved hypothetical protein [Escherichia coli MS 116-1]
 gi|115515588|gb|ABJ03663.1| conserved hypothetical protein [Escherichia coli APEC O1]
 gi|218368043|emb|CAR05846.1| conserved hypothetical protein [Escherichia coli S88]
 gi|226901693|gb|EEH87952.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|282951958|emb|CBG91681.1| putative DNA binding protein [Citrobacter rodentium ICC168]
 gi|291432425|gb|EFF05407.1| hypothetical protein ECDG_03839 [Escherichia coli B185]
 gi|300451043|gb|EFK14663.1| conserved hypothetical protein [Escherichia coli MS 116-1]
 gi|315289525|gb|EFU48920.1| conserved hypothetical protein [Escherichia coli MS 110-3]
 gi|323950468|gb|EGB46348.1| hypothetical protein ERKG_03146 [Escherichia coli H252]
 gi|323955638|gb|EGB51398.1| hypothetical protein ERLG_03130 [Escherichia coli H263]
          Length = 439

 Score = 90.4 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 60/226 (26%), Gaps = 19/226 (8%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            + LFSGG DS+      L        +S  Y    K +   +  + +K+     +++ +
Sbjct: 155 CVSLFSGGLDSAIGAIDLLAAGRAPLLVSHAY----KGDKSRQDQIAEKLSGQFSRFEIN 210

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                   +  +   + S      A            +  +  I L         L    
Sbjct: 211 ADPHIYQGVTDITMRTRSLNFLAFAAVGACAVQE---ISQQEKIDLFVPENGFISLNAPL 267

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
                     S      H         I   +     +  P  +  K +          +
Sbjct: 268 ----TPRRIGSLSTRTTHPHFITSIQKIFDALGISCQIINPYQFKTKGKMISECS---NK 320

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            L++ I+E + +C           G  C  C  C +R+        
Sbjct: 321 QLLSKIVESTVSC-----SHWKRMGQQCGVCIPCIIRRASLHAGGI 361


>gi|320184320|gb|EFW59132.1| hypothetical protein SGF_03485 [Shigella flexneri CDC 796-83]
          Length = 439

 Score = 90.4 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 61/226 (26%), Gaps = 19/226 (8%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            + LFSGG DS+      L        +S  Y    K +   +  + +K+     +++ +
Sbjct: 155 CVSLFSGGLDSAIGAIDLLAAGRAPLLVSHAY----KGDKSRQDQIAEKLSGQFSRFEIN 210

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                   +  +   + S     +A            +  +  I L         L    
Sbjct: 211 ADPHIYQGVTDITMRTRSLNFLALAAVGACAVQE---ISQQEKIDLFVPENGFISLNAPL 267

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
                     S      H         I   +     +  P  +  K +          +
Sbjct: 268 ----TPRRIGSLSTRTTHPHFITSIQKIFDALGISCQIINPYQFKTKGKMISECS---NK 320

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            L++ I+E + +C           G  C  C  C +R+        
Sbjct: 321 QLLSKIVESTVSC-----SHWKRMGQQCGVCIPCIIRRASLHAGGI 361


>gi|116873021|ref|YP_849802.1| thiamine biosynthesis protein [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123461105|sp|A0AJ41|THII_LISW6 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|116741899|emb|CAK21023.1| thiamine biosynthesis protein [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 403

 Score = 90.4 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 60/192 (31%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A  R   +E + F                ++K V+L  K 
Sbjct: 177 SGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHFH------SPPYTSEQAKQKAVDLAAKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               GE  +  +              +   I+     +  +     + L     L  +  
Sbjct: 231 AKYGGEVKMHIVPF----------TEIQEMIKQQIPESVIMTVTRRMMLKITDELRRKRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+ T           +  P++ + K E  ++AQ I
Sbjct: 281 GLAIVNGESLGQVASQTLESMLAINAVTTT---------PIIRPVVSMDKNEIIQIAQKI 331

Query: 188 GGQDLVNLILEE 199
              +L     E+
Sbjct: 332 DTYNLSVQPFED 343


>gi|83589067|ref|YP_429076.1| thiamine biosynthesis protein ThiI [Moorella thermoacetica ATCC
           39073]
 gi|123525192|sp|Q2RM06|THII_MOOTA RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|83571981|gb|ABC18533.1| Thiamine biosynthesis [Moorella thermoacetica ATCC 39073]
          Length = 390

 Score = 90.4 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 62/188 (32%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           LLL SGG DS       + R   +  L F                ++K+++L        
Sbjct: 177 LLLISGGIDSPVAGYMGMKRGLELTALHFH------SFPFTSERSKEKVIDLCRVLAGYS 230

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G   ++           +   N+   I+ N     +V     +    A  +A +     I
Sbjct: 231 GPLRLVV----------APFTNIQKAIRQNCPQEFYVTIMRRMMFRIARAVAAKEEAPAI 280

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           + G      +          + +++   +     + V  PL+   K E  ++A+ IG  D
Sbjct: 281 LTGESLGQVAS---------QTLQSMAVINKVVDLPVLRPLVAWDKSEIIEVARRIGTYD 331

Query: 192 LVNLILEE 199
           +     E+
Sbjct: 332 ISIRPYED 339


>gi|288553734|ref|YP_003425669.1| thiamine biosynthesis protein ThiI [Bacillus pseudofirmus OF4]
 gi|288544894|gb|ADC48777.1| thiamine biosynthesis protein ThiI [Bacillus pseudofirmus OF4]
          Length = 403

 Score = 90.4 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 55/190 (28%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R  R+E + F                 +K+ +L      
Sbjct: 181 KVLLMLSGGIDSPVAGYLTMKRGARIEAVHFH------SPPYTNERALQKVKDLAQTLTK 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +              +   +      N  +     + L  +  +A    I 
Sbjct: 235 YGSSIRLHLVPF----------TEIQQYLHKEAPSNYQMTLMRRMMLRISERIARERDIL 284

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +       +          +   +++ +  PL+ + K E   +A+ I  
Sbjct: 285 AIASGESLGQVASQTLHSMN---------TINEVTNLPIIRPLITMDKLEVIDIAKKIDT 335

Query: 190 QDLVNLILEE 199
            +   L  E+
Sbjct: 336 FETSILPFED 345


>gi|210610067|ref|ZP_03288246.1| hypothetical protein CLONEX_00432 [Clostridium nexile DSM 1787]
 gi|210152678|gb|EEA83684.1| hypothetical protein CLONEX_00432 [Clostridium nexile DSM 1787]
          Length = 406

 Score = 90.4 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 58/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R   +E   F                ++K+V+L    
Sbjct: 192 NGKAMLLLSGGIDSPVAGYMVSKRGVALEATYFH------APPYTSERAKQKVVDLAKLV 245

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +             ++ + I +    +          +  A   A   G
Sbjct: 246 SKYSGPIKLNIVNF----------TDIQLYIYEKCPHDELTIIMRRYMMRIAEHFAKESG 295

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +          + +++         + V+ P++   K E  ++A+ I
Sbjct: 296 CLGLITGESIGQVAS---------QTMQSLAATNDVCTLPVYRPVIGFDKQEIVEIAEKI 346

Query: 188 GGQDLVNLILEE 199
              +   L  E+
Sbjct: 347 DTFETSILPFED 358


>gi|157147704|ref|YP_001455023.1| hypothetical protein CKO_03507 [Citrobacter koseri ATCC BAA-895]
 gi|157084909|gb|ABV14587.1| hypothetical protein CKO_03507 [Citrobacter koseri ATCC BAA-895]
          Length = 446

 Score = 90.4 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 71/228 (31%), Gaps = 27/228 (11%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK-----IVELMP 65
            + LFSGG DS+  +   L    +   +S  Y      + +    +R+K     +     
Sbjct: 156 CVSLFSGGLDSAIGVIDFLSSGRKPLLISHSYKGDKTKQDQIAHKIREKGTFSRLRSSAN 215

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                +  D  +    L  ++ + +      +I ++   + FVP    I L         
Sbjct: 216 PIGRGMTRDITMRTRSLNFLAFALVGAYAVKQINNHKDLSIFVPENGFISLNAPL----- 270

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                          S      H     +   +   +   V +  P  ++ K +     +
Sbjct: 271 ---------THRRVGSLSTRTTHPYFIGMIQELFNNLGFGVRLINPYQFMTKGQMVSNCK 321

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
           D     +++ I++ + +C              C  C  C +R+   M+
Sbjct: 322 D---SKMLSEIVDLTVSC-----SHWKRKNQQCGYCVPCMIRRAALMK 361


>gi|26250334|ref|NP_756374.1| hypothetical protein c4512 [Escherichia coli CFT073]
 gi|26110764|gb|AAN82948.1|AE016769_63 Hypothetical protein c4512 [Escherichia coli CFT073]
          Length = 439

 Score = 90.4 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 60/226 (26%), Gaps = 19/226 (8%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            + LFSGG DS+      L        +S  Y    K +   +  + +K+     +++ +
Sbjct: 155 CVSLFSGGLDSAIGAIDLLAAGRAPLLVSHAY----KGDKSRQDQIAEKLSGQFSRFEIN 210

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                   +  +   + S      A            +  +  I L         L    
Sbjct: 211 ADPHIYQGVTDITMRTRSLNFLAFAAVGACAVQE---ISQQEKIDLFVPENGFISLNAPL 267

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
                     S      H         I   +     +  P  +  K +          +
Sbjct: 268 ----TPRRIGSLSTRTTHPHFITSIQKIFDALGISCQIINPYQFKTKGKMISECS---NK 320

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            L++ I+E + +C           G  C  C  C +R+        
Sbjct: 321 QLLSKIVESTVSC-----SHWKRMGQQCGVCIPCIIRRASLHAGGI 361


>gi|218132832|ref|ZP_03461636.1| hypothetical protein BACPEC_00693 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991705|gb|EEC57709.1| hypothetical protein BACPEC_00693 [Bacteroides pectinophilus ATCC
           43243]
          Length = 396

 Score = 90.4 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 53/192 (27%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R  +++   F                ++K+V+L    
Sbjct: 183 NGKAMLLLSGGIDSPVAGYMIAKRGVKIDATYFH------APPYTSERAKQKVVDLAKLV 236

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +              + + I D    +          +  A  LA R  
Sbjct: 237 ARYSGPITLNVVDF----------TEIQLYIYDQCPHDELTIIMRRYMMKIAEELANRSD 286

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +                        + V  P++   K E   L++ I
Sbjct: 287 CQGLITGESIGQVASQTIKSMYCTN---------EVCTMPVFRPVIGFDKQEIVDLSEKI 337

Query: 188 GGQDLVNLILEE 199
           G  +      E+
Sbjct: 338 GTYETSIQPFED 349


>gi|225568733|ref|ZP_03777758.1| hypothetical protein CLOHYLEM_04812 [Clostridium hylemonae DSM
           15053]
 gi|225162232|gb|EEG74851.1| hypothetical protein CLOHYLEM_04812 [Clostridium hylemonae DSM
           15053]
          Length = 393

 Score = 90.4 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 58/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R   +E   F                ++K+V+L    
Sbjct: 180 NGKAMLLLSGGIDSPVAGYMIAKRGVGIEATYFH------APPYTSERAKQKVVDLARLV 233

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +             ++ + I D    +          +  A   A + G
Sbjct: 234 SRYSGPVKLHVVNF----------TDIQLYIYDQCPHDELTIIMRRYMMRIAEHFAKKDG 283

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +          + +++         + V+ P++   K E   +A+ I
Sbjct: 284 CLGLITGESIGQVAS---------QTMQSLAATNDVCTLPVYRPVIGFDKQEIVDIAEKI 334

Query: 188 GGQDLVNLILEE 199
           G  +      E+
Sbjct: 335 GTFETSIQPFED 346


>gi|294501539|ref|YP_003565239.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
           megaterium QM B1551]
 gi|295706887|ref|YP_003599962.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
           megaterium DSM 319]
 gi|294351476|gb|ADE71805.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
           megaterium QM B1551]
 gi|294804546|gb|ADF41612.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
           megaterium DSM 319]
          Length = 403

 Score = 90.4 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 60/192 (31%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A+ R   +E + F                ++K+++L  K 
Sbjct: 177 SGKAMLMLSGGIDSPVAGYLAMKRGLEIEAVHFY------SPPFTSERSKQKVIDLTQKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                +  +  +              V   IQ     N  +     + L     +  +  
Sbjct: 231 TAYHEKVKLHIVPF----------TAVQQAIQKQIPENYTMTSTRRMMLRITDLIREKNE 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I  +             +  PL+ + K E  ++A+ I
Sbjct: 281 SLAIVTGDSLGQVASQTVESMYAINEVTNT---------PILRPLVTMDKTEIVEIARKI 331

Query: 188 GGQDLVNLILEE 199
              ++ N   E+
Sbjct: 332 DTHEISNRPYED 343


>gi|313905330|ref|ZP_07838696.1| thiamine biosynthesis/tRNA modification protein ThiI [Eubacterium
           cellulosolvens 6]
 gi|313469800|gb|EFR65136.1| thiamine biosynthesis/tRNA modification protein ThiI [Eubacterium
           cellulosolvens 6]
          Length = 396

 Score = 90.4 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 58/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             SA LL SGG DS         R  +++ + F                ++K+V+L    
Sbjct: 182 NGSAELLLSGGIDSPVAGWMIAKRGVQIDAVYFH------APPYTSERAKQKVVDLAKIV 235

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +             ++ + I +               +  A   A + G
Sbjct: 236 ARYSGRMRLHIVNF----------TDIQLAIYEKCPHEELTIIMRRYMMRIAEHFAEQDG 285

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +           A+           + V+ PL+   K E  +++Q I
Sbjct: 286 ALGLITGESIGQVASQTAHSLLCTNAVCK---------LPVYRPLIGFDKQEIIEISQKI 336

Query: 188 GGQDLVNLILEE 199
              +   L  E+
Sbjct: 337 DAYETSILPFED 348


>gi|317132595|ref|YP_004091909.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Ethanoligenens harbinense YUAN-3]
 gi|315470574|gb|ADU27178.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Ethanoligenens harbinense YUAN-3]
          Length = 391

 Score = 90.4 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 55/190 (28%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A +L SGG DS         R   V  + F                + K+++L+     
Sbjct: 180 RAAVLISGGIDSPVAAYMMARRGMSVCAVHF------ASPPYTSPRAKAKVLDLLKIVSA 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G      +              +  +I+ +     F        +  AA +A      
Sbjct: 234 YSGPIACFVVPF----------TALQEQIRAHCKEEFFTILLRRFMMRAAARIAEGQDCA 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++ G      +          +A          S + V  PL+ + K E  ++A+ I  
Sbjct: 284 ALITGESIGQVASQTIEAITCTQAA---------STLPVLRPLIGMDKEEIIRVARRIDT 334

Query: 190 QDLVNLILEE 199
            +   L   +
Sbjct: 335 FETSILPYAD 344


>gi|222151633|ref|YP_002560789.1| hypothetical protein MCCL_1386 [Macrococcus caseolyticus JCSC5402]
 gi|254784228|sp|B9E7C5|THII_MACCJ RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|222120758|dbj|BAH18093.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 402

 Score = 90.4 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 61/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                ++K+++L     +
Sbjct: 180 KTLLMLSGGIDSPVAGIEVMKRGVTIEAIHFH------SPPFTSEEAKQKVIDLTRIMAE 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           + GE  +  +             ++   I      N  +     + L  A   A ++   
Sbjct: 234 TTGEIKLHLVPF----------TDIQKMIHKKVPENLTMTSTRRMMLKIADRFARQIDAK 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      +         I A+           + +  PL+ L K E    A++IG 
Sbjct: 284 ALVNGENLGQVASQTLGSMYAINAVTN---------LPILRPLLTLDKDEIIIKAKEIGT 334

Query: 190 QDLVNLILEE 199
            D      E+
Sbjct: 335 FDTSIQPFED 344


>gi|223984458|ref|ZP_03634592.1| hypothetical protein HOLDEFILI_01886 [Holdemania filiformis DSM
           12042]
 gi|223963582|gb|EEF67960.1| hypothetical protein HOLDEFILI_01886 [Holdemania filiformis DSM
           12042]
          Length = 398

 Score = 90.0 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 61/207 (29%), Gaps = 33/207 (15%)

Query: 1   MNDIIK--------KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
           M D IK            ALL+ SGG DS       + R   +E + +            
Sbjct: 162 MADTIKGAGGYPVGMGGKALLMLSGGIDSPVAGYLTMKRGVEIECIHY------ASPPYT 215

Query: 53  RLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN 112
               +KK+++L        G   +  + +           ++ + I  +   +  +    
Sbjct: 216 SSSAQKKVLDLAGIISKYQGSIKVHIIPL----------TDLQLAIYKHCDESYAITIMR 265

Query: 113 IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
            +    A   A +     IV G      +                  +     + V  P+
Sbjct: 266 RMMYRIAERAAQKYKCLAIVNGESIGQVASQTLESMQ---------TINHVIDMPVIRPV 316

Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEE 199
           +   K E   +A+ I   +   L  E+
Sbjct: 317 VTYDKLEIIDVARRINTYETSILPFED 343


>gi|227872813|ref|ZP_03991127.1| thiamine biosynthesis protein [Oribacterium sinus F0268]
 gi|227841340|gb|EEJ51656.1| thiamine biosynthesis protein [Oribacterium sinus F0268]
          Length = 402

 Score = 90.0 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 61/192 (31%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R   +E   F                + K+++L  + 
Sbjct: 182 NGKAMLLLSGGIDSPVAGYKVAKRGALLEATYFH------APPYTSERAKIKVMDLAKQV 235

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +             ++ + I ++              +  A  LAY+  
Sbjct: 236 STYTGPILLHVVNF----------TDIQLAIYEHCPHEELTIIMRRYMMRIAEALAYKNN 285

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +          + +++ +       + V+ PL+   K E   +AQ+I
Sbjct: 286 CIGLITGESIGQVAS---------QTLQSLVCTNEVCTLPVYRPLIAFDKQEIVDVAQEI 336

Query: 188 GGQDLVNLILEE 199
           G  +      E+
Sbjct: 337 GTYETSIEPYED 348


>gi|299822741|ref|ZP_07054627.1| thiamine biosynthesis/tRNA modification protein ThiI [Listeria
           grayi DSM 20601]
 gi|299816270|gb|EFI83508.1| thiamine biosynthesis/tRNA modification protein ThiI [Listeria
           grayi DSM 20601]
          Length = 402

 Score = 90.0 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A+ R   VE + F                ++K V+L    
Sbjct: 177 SGKAMLMLSGGIDSPVAGYLAMKRGVDVEAVHFH------SPPYTSEKAKQKAVDLAATL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  +              +   I+     +  +     + L     +  +  
Sbjct: 231 SKYGGDVRMHVVPF----------TEIQETIKQQIPESVIMTVTRRMMLRITDQIRQKEQ 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             +  P++ + K E  ++A+ I
Sbjct: 281 GLAIINGESLGQVASQTLESMTAINAVTAT---------PIIRPVVTMDKNEIIQIAKQI 331

Query: 188 GGQDLVNLILEE 199
              DL     E+
Sbjct: 332 DTYDLSVQPFED 343


>gi|291548151|emb|CBL21259.1| thiazole biosynthesis/tRNA modification protein ThiI [Ruminococcus
           sp. SR1/5]
          Length = 393

 Score = 90.0 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 60/192 (31%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R  +++ + F                ++K+V+L    
Sbjct: 180 NGKAMLLLSGGIDSPVAGYMIAKRGVKIDAVYFH------APPYTSERAKQKVVDLARLV 233

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +             ++ + I D    +          +  A   A +  
Sbjct: 234 AKYSGPIRLHVVNF----------TDIQLYIYDQCPHDELTIIMRRYMMRIAEHFAKKDR 283

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +          + +++  +      + V+ P++   K E  ++++ I
Sbjct: 284 CLGLITGESIGQVAS---------QTLQSLASTNEVCTLPVYRPVIGFDKEEIVRISRKI 334

Query: 188 GGQDLVNLILEE 199
              +      E+
Sbjct: 335 DTFETSIQPFED 346


>gi|77164187|ref|YP_342712.1| hypothetical protein Noc_0663 [Nitrosococcus oceani ATCC 19707]
 gi|76882501|gb|ABA57182.1| conserved hypothetical protein [Nitrosococcus oceani ATCC 19707]
          Length = 425

 Score = 90.0 bits (221), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/232 (12%), Positives = 58/232 (25%), Gaps = 23/232 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            + L SGG DS       +        +S    Q    + + +     KI   +   + +
Sbjct: 140 CVTLLSGGLDSFVGAIDLVADGKAPFAVS----QVAAGDKQSQADFAAKIGGGLNHLQLN 195

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
               H +      + S  + +                      + L         +    
Sbjct: 196 ----HNVKCPGENERSQRARSFIFLAYGVLAASAQKHYHDGERVDLYICENGLISIN--- 248

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
                     S      H     +   +    E  + V  P  +  K E      +   Q
Sbjct: 249 -PPLTPARLGSLSTRTTHPVFLGLFQRLLDVAELRIAVRNPYQFRTKGEML---LECKDQ 304

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKY 238
             +     E+ +C    R+        C  C  C +R+  +  +      KY
Sbjct: 305 AFLRKHAAETTSCGRYARNGW----QHCGRCFPCLIRRAAFHAWGKDDRTKY 352


>gi|212638321|ref|YP_002314841.1| thiamine biosynthesis protein ThiI [Anoxybacillus flavithermus WK1]
 gi|226703938|sp|B7GGQ4|THII_ANOFW RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|212559801|gb|ACJ32856.1| Thiamine biosynthesis ATP pyrophosphatase [Anoxybacillus
           flavithermus WK1]
          Length = 397

 Score = 90.0 bits (221), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 63/192 (32%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A+ R  ++E + F                ++K+++L  + 
Sbjct: 177 SGKAMLMLSGGIDSPVAGYLAMKRGLQIEAVHFF------SPPFTSERAKQKVIDLAQRL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +  G   +  +              +   I      N  +       L     +  +  
Sbjct: 231 TEFGGTIRLHIVPF----------TELQQAIYKQVPENYSLIAMRRAMLRITDEIRKKEN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +          + +E+ + +   +   +  PL+ + K E   +A+ I
Sbjct: 281 GLAIVTGESLGQVAS---------QTLESMVVVNDVTTTPILRPLVSMDKTEIIAIAERI 331

Query: 188 GGQDLVNLILEE 199
           G   +     E+
Sbjct: 332 GTHHISIRPYED 343


>gi|315303375|ref|ZP_07873989.1| thiamine biosynthesis/tRNA modification protein ThiI [Listeria
           ivanovii FSL F6-596]
 gi|313628255|gb|EFR96774.1| thiamine biosynthesis/tRNA modification protein ThiI [Listeria
           ivanovii FSL F6-596]
          Length = 403

 Score = 90.0 bits (221), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A  R   +E + F                ++K ++L  K 
Sbjct: 177 SGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHFH------SPPYTSEQAKQKAIDLAAKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  +              +   I+     +  +     + L     L  +  
Sbjct: 231 AKYSGQVQMHIVPF----------TEIQEVIKQQIPESVIMTVTRRMMLRITEKLRRKRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+             +  P++ + K E  ++AQ I
Sbjct: 281 GLAIVNGESLGQVASQTLESMLAINAVTAT---------PIIRPVVSMDKNEIIQIAQKI 331

Query: 188 GGQDLVNLILEE 199
              +L     E+
Sbjct: 332 DTYNLSVQPFED 343


>gi|296272539|ref|YP_003655170.1| hypothetical protein Arnit_1000 [Arcobacter nitrofigilis DSM 7299]
 gi|296096713|gb|ADG92663.1| conserved hypothetical protein [Arcobacter nitrofigilis DSM 7299]
          Length = 446

 Score = 90.0 bits (221), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 74/222 (33%), Gaps = 17/222 (7%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           + L SGG DS       ++  + +  +S   G       +    +  K+   +      L
Sbjct: 143 VCLLSGGLDSLAGAIDLINNDNNILFVSHFDGAGAIDGEQ--KKIFDKLKASVSNKNLYL 200

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
            + H+ P   L   S S          +  ++        + I       +    G+ +I
Sbjct: 201 SQFHVYPSDYLFYSSDS--------NQRARSILFLGFALFHAINFNVNEIVLPENGLISI 252

Query: 132 VIGVCETDYSGY-PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
            + + E+  S       H             +  ++++  P  +  K E      D   +
Sbjct: 253 NLPLNESRTSSNSTRTTHPYFIKKLEQFIFQVGINISIVNPYQYKTKGEMLDKCLD---K 309

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYG---CNSCPACYLRQK 229
           DL+NL++  + +C   KR   +    G   C  C  C +R+ 
Sbjct: 310 DLLNLLINRTISCSHYKRRGPWTRQVGINNCGYCIPCLIRRA 351


>gi|289422744|ref|ZP_06424584.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Peptostreptococcus anaerobius 653-L]
 gi|289156923|gb|EFD05548.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Peptostreptococcus anaerobius 653-L]
          Length = 393

 Score = 90.0 bits (221), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 55/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+ L SGG DS         R   +E + F                ++K+ +L    
Sbjct: 180 NGKAMCLLSGGIDSPVSSWMVAKRGVDIEAVHFH------SYPFTNERSQEKVRDLARIL 233

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +  L          ++   I +N              +  A  +     
Sbjct: 234 SKYCGPIKLHMVNTL----------DIQKAIAENCNEEETTILSRRFMMRIAQQIGESRY 283

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            T +V G      +           A            + V  PL+ + K +  K+A+DI
Sbjct: 284 CTALVTGESIGQVASQTMQGLYCTNAS---------VTMPVFRPLIAMDKIDIIKIAEDI 334

Query: 188 GGQDLVNLILEE 199
           G  +   +   +
Sbjct: 335 GTYETSIIPEAD 346


>gi|307243613|ref|ZP_07525756.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Peptostreptococcus stomatis DSM 17678]
 gi|306492982|gb|EFM64992.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Peptostreptococcus stomatis DSM 17678]
          Length = 395

 Score = 90.0 bits (221), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 53/189 (28%), Gaps = 25/189 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+ L SGG DS         R   +E + F                ++K+ +L    
Sbjct: 179 NGKAITLLSGGIDSPVASWLVAKRGVDIEAVHFH------SYPFTNERSQEKVRDLARIL 232

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  + IL          ++   I +               +  A  +     
Sbjct: 233 SKYCGPIKLHMVNIL----------DIQKAIAEKCNEEETTILSRRFMMRIAEEIGKSRY 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +           A            + +  PL+ + K +  KLA++I
Sbjct: 283 CDALITGESIGQVASQTMQGIVCTNAA---------VSLPIFRPLIAMDKVDIIKLAEEI 333

Query: 188 GGQDLVNLI 196
           G  D   + 
Sbjct: 334 GTYDTSIIP 342


>gi|293400752|ref|ZP_06644897.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305778|gb|EFE47022.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 405

 Score = 90.0 bits (221), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 58/190 (30%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL++ SGG DS       + R   +E + +                + K++EL      
Sbjct: 183 KALVMLSGGIDSPVACYMTMKRGVAIECIHY------ASPPYTSQAAQDKVLELARAIAP 236

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G   +  +             ++ + I  N   +  +     +    A  +A +    
Sbjct: 237 YQGHIRLHIIPF----------TDLQLAIYKNCDESYAITIMRRMMYRIAERVAQKQNCL 286

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +                  +   + + V  P+  L K E   ++Q IG 
Sbjct: 287 AIVNGESIGQVASQTLESMQ---------TINCVTDMPVIRPVACLDKLEIIDISQKIGT 337

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 338 YDISIQPFED 347


>gi|325662162|ref|ZP_08150780.1| tRNA sulfurtransferase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|331085959|ref|ZP_08335042.1| tRNA sulfurtransferase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|325471611|gb|EGC74831.1| tRNA sulfurtransferase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|330406882|gb|EGG86387.1| tRNA sulfurtransferase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 393

 Score = 89.6 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 58/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R   +E   F                ++K+++L    
Sbjct: 180 NGKAMLLLSGGIDSPVAGYMISKRGVGLEATYFH------APPYTSERAKQKVIDLAKLV 233

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +             ++ + I D    +          +  A   A   G
Sbjct: 234 AKYSGPIKLHIVNF----------TDIQLYIYDKCPHDELTIIMRRYMMKIAEHFAKESG 283

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +          + +++         + V+ P++   K E  ++A+ I
Sbjct: 284 CLGLITGESIGQVAS---------QTMQSLAATNDVCTLPVYRPVIGFDKQEIVEIAEKI 334

Query: 188 GGQDLVNLILEE 199
              +   L  E+
Sbjct: 335 DTYETSILPFED 346


>gi|317495293|ref|ZP_07953663.1| thiamine biosynthesis/tRNA modification protein ThiI [Gemella
           moribillum M424]
 gi|316914715|gb|EFV36191.1| thiamine biosynthesis/tRNA modification protein ThiI [Gemella
           moribillum M424]
          Length = 416

 Score = 89.6 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 70/195 (35%), Gaps = 25/195 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +  +  ALLL SGG DS         +   VE + F      +          +KI +L 
Sbjct: 175 VNTSSKALLLLSGGIDSPVAAHMLQVKGVEVEMVHF------QSPPFTSADALQKIFDLT 228

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            K  + +G+  +  +              +  +I      N  +       L  A  +A 
Sbjct: 229 IKLSEVVGKIKLHVVNF----------TKLQTEIVKCVPSNYTMTSTRRFMLRIAEEVAK 278

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           R G   +  G      +          + +E+   +   +++ +  PL+ + K +  K+A
Sbjct: 279 REGCLALATGESLGQVAS---------QTLESMNCINNVTNMPILRPLLSMDKVDIIKIA 329

Query: 185 QDIGGQDLVNLILEE 199
           +DI   ++ NL  E+
Sbjct: 330 KDIETLEISNLPFED 344


>gi|256850914|ref|ZP_05556303.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           jensenii 27-2-CHN]
 gi|260661128|ref|ZP_05862042.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           jensenii 115-3-CHN]
 gi|282934174|ref|ZP_06339452.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           jensenii 208-1]
 gi|297205792|ref|ZP_06923187.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           jensenii JV-V16]
 gi|256615976|gb|EEU21164.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           jensenii 27-2-CHN]
 gi|260548065|gb|EEX24041.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           jensenii 115-3-CHN]
 gi|281301788|gb|EFA94054.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           jensenii 208-1]
 gi|297148918|gb|EFH29216.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           jensenii JV-V16]
          Length = 404

 Score = 89.6 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 61/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS      AL R   +E + F                  K  EL     +
Sbjct: 179 KAVMMLSGGIDSPVASYLALKRGVDIEMVHFF------SPPYTSDKALAKAKELTGILAN 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+   + +              +   I++       +  +    L  A  +  +    
Sbjct: 233 YCGKITFIAVPFA----------EIQETIKEKLPEGYLMTIQRRFMLRLADMIREKRKGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+   +   +   V  P+  + K E  +LA++IG 
Sbjct: 283 AIFNGESVGQVAS---------QTLESMAAINNVTTTPVIRPVATMDKTEIIRLAEEIGT 333

Query: 190 QDLVNLILEE 199
            DL  +  E+
Sbjct: 334 FDLSVMPFED 343


>gi|238855290|ref|ZP_04645609.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           jensenii 269-3]
 gi|260664648|ref|ZP_05865500.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           jensenii SJ-7A-US]
 gi|282932417|ref|ZP_06337842.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           jensenii 208-1]
 gi|313471898|ref|ZP_07812390.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           jensenii 1153]
 gi|238832182|gb|EEQ24500.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           jensenii 269-3]
 gi|239529182|gb|EEQ68183.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           jensenii 1153]
 gi|260561713|gb|EEX27685.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           jensenii SJ-7A-US]
 gi|281303366|gb|EFA95543.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           jensenii 208-1]
          Length = 404

 Score = 89.6 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 61/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS      AL R   +E + F                  K  EL     +
Sbjct: 179 KAVMMLSGGIDSPVASYLALKRGVDIEMVHFF------SPPYTSDKALAKAKELTGILAN 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+   + +              +   I++       +  +    L  A  +  +    
Sbjct: 233 YCGKITFIAVPFA----------EIQETIKEKLPEGYLMTIQRRFMLRLADMIREKRKGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+   +   +   V  P+  + K E  +LA++IG 
Sbjct: 283 AIFNGESVGQVAS---------QTLESMAAINNVTTTPVIRPVATMDKTEIIRLAEEIGT 333

Query: 190 QDLVNLILEE 199
            DL  +  E+
Sbjct: 334 FDLSVMPFED 343


>gi|291535167|emb|CBL08279.1| thiazole biosynthesis/tRNA modification protein ThiI [Roseburia
           intestinalis M50/1]
          Length = 393

 Score = 89.6 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 57/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R   ++   F                ++K+V+L    
Sbjct: 179 NGKAMLLLSGGIDSPVAGYMIAKRGVTIDATYFH------APPYTSERAKQKVVDLAKIV 232

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G  ++  +             ++ + I +               +  A   A    
Sbjct: 233 AKYSGPINLHVVNF----------TDIQLYIYEQCPHEELTIIMRRYMMKLAEHFAKENK 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +          + +++         + V+ PL+   K E  ++++ I
Sbjct: 283 CLGLITGESIGQVAS---------QTMQSLAATNEVCTMPVYRPLIGFDKQEIVEISEKI 333

Query: 188 GGQDLVNLILEE 199
              +   L  E+
Sbjct: 334 DAYETSILPFED 345


>gi|293557229|ref|ZP_06675777.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecium E1039]
 gi|291600593|gb|EFF30897.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecium E1039]
          Length = 403

 Score = 89.6 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 61/192 (31%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS     +A+ R   +E + F                 +K  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYFAMKRGVEIEAVHF------ASPPYTSEQALQKAKDLTAKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +G  H + +           T+      +           R ++  +       R G
Sbjct: 231 APYVGTIHFIEVPF---------TEIQEEIKKSVPQGYWMTITRRMMLRLTDEIRRIRHG 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +         S          + +++ + +   ++  +  P+  + K E  ++A+ I
Sbjct: 282 LVILNGESLGQVAS----------QTLQSMVAINEVTNTPIIRPVATMDKLEIIEVAEQI 331

Query: 188 GGQDLVNLILEE 199
               L     E+
Sbjct: 332 DTFKLSIQPFED 343


>gi|314938903|ref|ZP_07846170.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecium TX0133a04]
 gi|314943088|ref|ZP_07849889.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecium TX0133C]
 gi|314948114|ref|ZP_07851515.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecium TX0082]
 gi|314951620|ref|ZP_07854665.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecium TX0133A]
 gi|314993875|ref|ZP_07859209.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecium TX0133B]
 gi|314996716|ref|ZP_07861739.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecium TX0133a01]
 gi|313589154|gb|EFR67999.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecium TX0133a01]
 gi|313591685|gb|EFR70530.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecium TX0133B]
 gi|313596216|gb|EFR75061.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecium TX0133A]
 gi|313598190|gb|EFR77035.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecium TX0133C]
 gi|313641777|gb|EFS06357.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecium TX0133a04]
 gi|313645450|gb|EFS10030.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecium TX0082]
          Length = 397

 Score = 89.6 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 62/192 (32%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS     +A+ R   +E + F                 +K  +L  K 
Sbjct: 171 SGKGMLMLSGGIDSPVAGYFAMKRGVEIEAVHF------ASPPYTSEQALQKAKDLTAKL 224

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +G  H + +           T+      +           R ++  +       R G
Sbjct: 225 APYVGTIHFIEVPF---------TEIQEEIKKSVPQGYWMTITRRMMLRLTDEIRRIRHG 275

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +         S          + +++ + +   ++  +  P+  + K E  ++A+ I
Sbjct: 276 LVILNGESLGQVAS----------QTLQSMVAINEVTNTPIIRPVATMDKLEIIEVAEQI 325

Query: 188 GGQDLVNLILEE 199
              +L     E+
Sbjct: 326 DTFNLSIQPFED 337


>gi|308174641|ref|YP_003921346.1| persulfide ATP pyrophosphatase [Bacillus amyloliquefaciens DSM 7]
 gi|307607505|emb|CBI43876.1| persulfide ATP pyrophosphatase involved in thiamine biosynthesis
           and tRNA modification [Bacillus amyloliquefaciens DSM 7]
 gi|328554567|gb|AEB25059.1| thiamine biosynthesis protein ThiI [Bacillus amyloliquefaciens
           TA208]
 gi|328912971|gb|AEB64567.1| persulfide ATP pyrophosphatase involved in thiamine biosynthesis
           and tRNA modification [Bacillus amyloliquefaciens LL3]
          Length = 401

 Score = 89.6 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 58/190 (30%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+L+ SGG DS     +A+ R   VE + F                ++K+++L      
Sbjct: 179 KAMLMLSGGFDSPVAGFYAMKRGLSVEAVHFF------SPPYTSERAKQKVIDLAGCLAR 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G   +  +                  IQ     N  +     + L  A  +       
Sbjct: 233 FGGSMTLHIVPF----------TKTQELIQKQIPENYTMTATRRLMLQIADRIREERKAL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I+ G      +         I A+             +  PL+ + K E  + +++IG 
Sbjct: 283 AIITGESLGQVASQTLESMYAINAVTAT---------PILRPLIGMDKTEIIEKSKEIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 YETSIQPFED 343


>gi|257899237|ref|ZP_05678890.1| thiamine biosynthesis protein [Enterococcus faecium Com15]
 gi|257837149|gb|EEV62223.1| thiamine biosynthesis protein [Enterococcus faecium Com15]
          Length = 403

 Score = 89.6 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 62/192 (32%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS     +A+ R   +E + F                 +K  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYFAMKRGVEIEAVHF------ASPPYTSEQALQKAKDLTAKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +G  H + +           T+      +           R ++  +       R G
Sbjct: 231 APYVGTIHFIEVPF---------TEIQEEIKKSVPQGYWMTITRRMMLRLTDEIRRIRHG 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +         S          + +++ + +   ++  +  P+  + K E  ++A+ I
Sbjct: 282 LVILNGESLGQVAS----------QTLQSMVAINEVTNTPIIRPVATMDKLEIIEVAEQI 331

Query: 188 GGQDLVNLILEE 199
              +L     E+
Sbjct: 332 DTFNLSIQPFED 343


>gi|257888390|ref|ZP_05668043.1| thiamine biosynthesis protein [Enterococcus faecium 1,141,733]
 gi|257897236|ref|ZP_05676889.1| thiamine biosynthesis protein [Enterococcus faecium Com12]
 gi|293378008|ref|ZP_06624186.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecium PC4.1]
 gi|293570384|ref|ZP_06681441.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecium E980]
 gi|257824444|gb|EEV51376.1| thiamine biosynthesis protein [Enterococcus faecium 1,141,733]
 gi|257833801|gb|EEV60222.1| thiamine biosynthesis protein [Enterococcus faecium Com12]
 gi|291609562|gb|EFF38827.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecium E980]
 gi|292643373|gb|EFF61505.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecium PC4.1]
          Length = 403

 Score = 89.6 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 62/192 (32%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS     +A+ R   +E + F                 +K  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYFAMKRGVEIEAVHF------ASPPYTSEQALQKAKDLTAKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +G  H + +           T+      +           R ++  +       R G
Sbjct: 231 APYVGTIHFIEVPF---------TEIQEEIKKSVPQGYWMTITRRMMLRLTDEIRRIRHG 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +         S          + +++ + +   ++  +  P+  + K E  ++A+ I
Sbjct: 282 LVILNGESLGQVAS----------QTLQSMVAINEVTNTPIIRPVATMDKLEIIEVAEQI 331

Query: 188 GGQDLVNLILEE 199
              +L     E+
Sbjct: 332 DTFNLSIQPFED 343


>gi|257885018|ref|ZP_05664671.1| thiamine biosynthesis protein [Enterococcus faecium 1,231,501]
 gi|257820870|gb|EEV48004.1| thiamine biosynthesis protein [Enterococcus faecium 1,231,501]
          Length = 403

 Score = 89.6 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 62/192 (32%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS     +A+ R   +E + F                 +K  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYFAMKRGVEIEAVHF------ASPPYTSEQALQKAKDLTAKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +G  H + +           T+      +           R ++  +       R G
Sbjct: 231 APYVGTIHFIEVPF---------TEIQEEIKKSVPQGYWMTITRRMMLRLTDEIRRIRHG 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +         S          + +++ + +   ++  +  P+  + K E  ++A+ I
Sbjct: 282 LVILNGESLGQVAS----------QTLQSMVAINEVTNTPIIRPVATMDKLEIIEVAEQI 331

Query: 188 GGQDLVNLILEE 199
              +L     E+
Sbjct: 332 DTFNLSIQPFED 343


>gi|227550357|ref|ZP_03980406.1| thiamine biosynthesis protein [Enterococcus faecium TX1330]
 gi|227180496|gb|EEI61468.1| thiamine biosynthesis protein [Enterococcus faecium TX1330]
          Length = 397

 Score = 89.6 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 62/192 (32%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS     +A+ R   +E + F                 +K  +L  K 
Sbjct: 171 SGKGMLMLSGGIDSPVAGYFAMKRGVEIEAVHF------ASPPYTSEQALQKAKDLTAKL 224

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +G  H + +           T+      +           R ++  +       R G
Sbjct: 225 APYVGTIHFIEVPF---------TEIQEEIKKSVPQGYWMTITRRMMLRLTDEIRRIRHG 275

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +         S          + +++ + +   ++  +  P+  + K E  ++A+ I
Sbjct: 276 LVILNGESLGQVAS----------QTLQSMVAINEVTNTPIIRPVATMDKLEIIEVAEQI 325

Query: 188 GGQDLVNLILEE 199
              +L     E+
Sbjct: 326 DTFNLSIQPFED 337


>gi|69246249|ref|ZP_00603862.1| Thiamine biosynthesis protein [Enterococcus faecium DO]
 gi|257879523|ref|ZP_05659176.1| thiamine biosynthesis protein [Enterococcus faecium 1,230,933]
 gi|257883458|ref|ZP_05663111.1| thiamine biosynthesis protein [Enterococcus faecium 1,231,502]
 gi|257890244|ref|ZP_05669897.1| thiamine biosynthesis protein [Enterococcus faecium 1,231,410]
 gi|257894821|ref|ZP_05674474.1| thiamine biosynthesis protein [Enterococcus faecium 1,231,408]
 gi|258616814|ref|ZP_05714584.1| thiazole biosynthesis protein ThiI [Enterococcus faecium DO]
 gi|260559760|ref|ZP_05831940.1| thiamine biosynthesis protein [Enterococcus faecium C68]
 gi|261209051|ref|ZP_05923455.1| thiamine biosynthesis protein [Enterococcus faecium TC 6]
 gi|289566555|ref|ZP_06446977.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecium D344SRF]
 gi|293559743|ref|ZP_06676264.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecium E1162]
 gi|294615717|ref|ZP_06695570.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecium E1636]
 gi|294617311|ref|ZP_06696951.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecium E1679]
 gi|294622526|ref|ZP_06701544.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecium U0317]
 gi|68195350|gb|EAN09799.1| Thiamine biosynthesis protein [Enterococcus faecium DO]
 gi|257813751|gb|EEV42509.1| thiamine biosynthesis protein [Enterococcus faecium 1,230,933]
 gi|257819116|gb|EEV46444.1| thiamine biosynthesis protein [Enterococcus faecium 1,231,502]
 gi|257826604|gb|EEV53230.1| thiamine biosynthesis protein [Enterococcus faecium 1,231,410]
 gi|257831200|gb|EEV57807.1| thiamine biosynthesis protein [Enterococcus faecium 1,231,408]
 gi|260074428|gb|EEW62750.1| thiamine biosynthesis protein [Enterococcus faecium C68]
 gi|260076963|gb|EEW64686.1| thiamine biosynthesis protein [Enterococcus faecium TC 6]
 gi|289161654|gb|EFD09532.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecium D344SRF]
 gi|291591437|gb|EFF23093.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecium E1636]
 gi|291596420|gb|EFF27673.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecium E1679]
 gi|291597969|gb|EFF29083.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecium U0317]
 gi|291606291|gb|EFF35704.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecium E1162]
          Length = 403

 Score = 89.6 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 62/192 (32%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS     +A+ R   +E + F                 +K  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYFAMKRGVEIEAVHF------ASPPYTSEQALQKAKDLTAKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +G  H + +           T+      +           R ++  +       R G
Sbjct: 231 APYVGTIHFIEVPF---------TEIQEEIKKSVPQGYWMTITRRMMLRLTDEIRRIRHG 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +         S          + +++ + +   ++  +  P+  + K E  ++A+ I
Sbjct: 282 LVILNGESLGQVAS----------QTLQSMVAINEVTNTPIIRPVATMDKLEIIEVAEQI 331

Query: 188 GGQDLVNLILEE 199
              +L     E+
Sbjct: 332 DTFNLSIQPFED 343


>gi|197303725|ref|ZP_03168762.1| hypothetical protein RUMLAC_02454 [Ruminococcus lactaris ATCC
           29176]
 gi|197297245|gb|EDY31808.1| hypothetical protein RUMLAC_02454 [Ruminococcus lactaris ATCC
           29176]
          Length = 406

 Score = 89.6 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 58/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             SA+LL SGG DS         R   +E   F                ++K+V+L    
Sbjct: 189 NGSAMLLLSGGIDSPVAGYMIAKRGVEIEATYFH------APPYTSERAKEKVVDLARLV 242

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +             ++ + I +    +          +  A   A + G
Sbjct: 243 SAYAGPIKLHVVNF----------TDIQLAIYEKCPHDELTIIMRRYMMKIAEHFAKKDG 292

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +       +   A+           + V+ PL+   K E  ++++ I
Sbjct: 293 CLGLITGESIGQVASQTMQSLNATNAV---------CTLPVYRPLIGFDKKEIVEISEKI 343

Query: 188 GGQDLVNLILEE 199
              +      E+
Sbjct: 344 NTYETSIQPFED 355


>gi|288818720|ref|YP_003433068.1| queuosine biosynthesis protein [Hydrogenobacter thermophilus TK-6]
 gi|288788120|dbj|BAI69867.1| queuosine biosynthesis protein [Hydrogenobacter thermophilus TK-6]
 gi|308752307|gb|ADO45790.1| Queuosine synthesis [Hydrogenobacter thermophilus TK-6]
          Length = 203

 Score = 89.6 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 81/228 (35%), Gaps = 26/228 (11%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +     A+ LFSGG +S+T L   L R + V  +    G   +      L    ++ +  
Sbjct: 1   MSAYKIAV-LFSGGVESTTLLYMYLQRKEIVYPVYIKMG---ESWERLELENALRLWQYT 56

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                SL    ++ L + G I  S    +             F+P RN+  +   A  A 
Sbjct: 57  KSRYASLRPLRVINLQVSGAIRKSPYQVS-----------EIFIPLRNMSLITACALYAL 105

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
              +  + IG        +PD     I+ +E  I+ G  +  ++  P   L+K +  K  
Sbjct: 106 SKKVRRLAIGSLGLY--PFPDNSKSYIKELERLISEGSGTAFSIEMPFFGLEKGKIVKEF 163

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
                     +    + +C + K+  +      C  C  C  RQ+  +
Sbjct: 164 YG-------KVPYHLTLSCAMPKKVGKKI--LHCGKCIKCKERQEALL 202


>gi|328952835|ref|YP_004370169.1| hypothetical protein Desac_1124 [Desulfobacca acetoxidans DSM
           11109]
 gi|328453159|gb|AEB08988.1| hypothetical protein Desac_1124 [Desulfobacca acetoxidans DSM
           11109]
          Length = 428

 Score = 89.6 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/237 (12%), Positives = 63/237 (26%), Gaps = 24/237 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPK 66
            P  + LFSGG DS       L+    V  +S  D+GQ    +      + +       +
Sbjct: 132 RPDCICLFSGGVDSLAGAVDLLEDGRNVLLVSHYDFGQLAASQKILAQALIEHYGAHRVR 191

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 +                    ++++ +        +    +        +    
Sbjct: 192 RWGFRVQF---------------EAPELSLRSRSLLFIALGLAAAAVWGENLPLVIPENG 236

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I+           S      H    +      +       +  P   + K E    ++ 
Sbjct: 237 WISLNPPLTGNRLGSYSTRTTHPYFISGLKQFWVNRGIAHDLGNPYQEVTKGEMLARSR- 295

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYG-CNSCPACYLRQKGWM----EFKEKY 238
                L+  +L  + +C      +  +   G C  C  C +R+        +   +Y
Sbjct: 296 --NPALIRDLLPHTISCAHPVASRWLKGRQGNCGYCFPCLMRRAALHTLGWDDGRQY 350


>gi|218295987|ref|ZP_03496767.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermus
           aquaticus Y51MC23]
 gi|218243725|gb|EED10253.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermus
           aquaticus Y51MC23]
          Length = 406

 Score = 89.6 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 56/190 (29%), Gaps = 27/190 (14%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPK 66
           +   + L SGG DS       + R   V  + F  +   +    E    + +++     +
Sbjct: 173 SGKVVALLSGGIDSPVAAYRLMRRGAEVVLVHFHPFPLLSGASREKARAIAERLARFQHR 232

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +  L                      V  +I         V       L  A  +A   
Sbjct: 233 VRLHLVPF-----------------SEVQRRIILEAPKAYRVVLYRRYMLRLAEAVAKEE 275

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   +V G      +          + +E    +   + + V  PL+ L K E  K AQ 
Sbjct: 276 GALALVTGDSLGQVAS---------QTLENLYVVNQAATLPVFRPLIGLDKGEIVKEAQK 326

Query: 187 IGGQDLVNLI 196
           IG   +  L 
Sbjct: 327 IGTYPISILP 336


>gi|160895343|ref|ZP_02076114.1| hypothetical protein CLOL250_02902 [Clostridium sp. L2-50]
 gi|156863036|gb|EDO56467.1| hypothetical protein CLOL250_02902 [Clostridium sp. L2-50]
          Length = 395

 Score = 89.6 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 56/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               + L SGG DS         R  ++E + F                ++K+++L    
Sbjct: 179 NGKGMALLSGGIDSPVATYMIAKRGVQMEAVYFH------APPFTSERAKEKVIDLACLV 232

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D  G   +  +             +V M I DN              +  A  LA R  
Sbjct: 233 ADYAGAIKLHVVNFA----------DVQMAIYDNCPHEELTIIMKRYMIKIAEELAKRND 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
               V G      S                  +   S + V  P + L K E   +++ I
Sbjct: 283 CQCTVTGESIGQVSSQTVFS---------LAVINDVSTLPVFRPCIGLDKQEIVDISEKI 333

Query: 188 GGQDLVNLILEE 199
           G  +   L  E+
Sbjct: 334 GTYEASILPYED 345


>gi|240145920|ref|ZP_04744521.1| thiamine biosynthesis/tRNA modification protein ThiI [Roseburia
           intestinalis L1-82]
 gi|257201985|gb|EEV00270.1| thiamine biosynthesis/tRNA modification protein ThiI [Roseburia
           intestinalis L1-82]
 gi|291539694|emb|CBL12805.1| thiazole biosynthesis/tRNA modification protein ThiI [Roseburia
           intestinalis XB6B4]
          Length = 393

 Score = 89.6 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 57/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R   ++   F                ++K+V+L    
Sbjct: 179 NGKAMLLLSGGIDSPVAGYMIAKRGVTIDATYFH------APPYTSERAKQKVVDLAKIV 232

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G  ++  +             ++ + I +               +  A   A    
Sbjct: 233 AKYSGPINLHVVNF----------TDIQLYIYEQCPHEELTIIMRRYMMKLAEHFAKENK 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +          + +++         + V+ PL+   K E  ++++ I
Sbjct: 283 CLGLITGESIGQVAS---------QTMQSLAATNEVCTMPVYRPLIGFDKQEIVEISEKI 333

Query: 188 GGQDLVNLILEE 199
              +   L  E+
Sbjct: 334 DAYETSILPFED 345


>gi|313901928|ref|ZP_07835346.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thermaerobacter subterraneus DSM 13965]
 gi|313467823|gb|EFR63319.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thermaerobacter subterraneus DSM 13965]
          Length = 404

 Score = 89.6 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 57/190 (30%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A  L SGG DS   +  A+ R      + F                R+K+V+L      
Sbjct: 190 RACALLSGGIDSPVAVWMAMKRGLVPICVHFH------SPPFTSERAREKVVDLTRVLAR 243

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G                     V   IQ    P   +     +    A  +A R    
Sbjct: 244 WGGPL----------PLWVVHFTEVQRAIQLECPPELTITLMRRMMFRLAERIAARERAL 293

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      +        TI A+ T         + V  PL+ + K E  + A+ IG 
Sbjct: 294 ALVTGESLGQVASQTLESIRTISAVAT---------LPVLRPLIGMDKAEIVERARAIGT 344

Query: 190 QDLVNLILEE 199
            D   L  E+
Sbjct: 345 YDTSVLPYED 354


>gi|283769112|ref|ZP_06342017.1| thiamine biosynthesis/tRNA modification protein ThiI [Bulleidia
           extructa W1219]
 gi|283104298|gb|EFC05676.1| thiamine biosynthesis/tRNA modification protein ThiI [Bulleidia
           extructa W1219]
          Length = 472

 Score = 89.6 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 63/192 (32%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++L SGG DS       + R  +VE + F                + K+++L    
Sbjct: 175 NGKVMMLLSGGIDSPVATYQLIKRGLKVEAVHF------AAPPYTSEAAKNKVLKLASMI 228

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D  G   +  +              + +     +     +  R +  +     +  R  
Sbjct: 229 SDYQGGMKVHVVPF--------TELQLDIYRVAKDPYAITLMRRMMFRIAEKLAINNR-- 278

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I  G      +          + +E+ + +    H+ V  PL+ + K E  +LA++I
Sbjct: 279 CLAIGTGESLGQVAS---------QTLESMVTINDVVHIPVLRPLVSMDKVEIIQLAREI 329

Query: 188 GGQDLVNLILEE 199
           G  +   L  E+
Sbjct: 330 GTYETSILPYED 341


>gi|227535265|ref|ZP_03965314.1| thiamine-phosphate kinase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|227187149|gb|EEI67216.1| thiamine-phosphate kinase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
          Length = 405

 Score = 89.6 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 61/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A L+ SGG DS     +AL R   +E + F                  K  +L  K   
Sbjct: 179 KAALMLSGGIDSPVAGYYALKRGVDIEMVHFF------SPPYTSQQALNKAKQLTAKLTP 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G  + + +              +  +I+        +  +  + L     +A + G  
Sbjct: 233 YVGRIYFIEVPF----------TEIQEEIKAKVPEGYLMTVQRRLMLRLTEAIAQQRGDL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+   +   + + +  P+  + K E    A+ I  
Sbjct: 283 AIFNGESVGQVAS---------QTLESMAAINDVTTMPIIRPVATMDKNEIIAEAEKIDT 333

Query: 190 QDLVNLILEE 199
            DL  +  E+
Sbjct: 334 YDLSIMPFED 343


>gi|239631665|ref|ZP_04674696.1| thiamine biosynthesis ATP pyrophosphatase [Lactobacillus paracasei
           subsp. paracasei 8700:2]
 gi|301066299|ref|YP_003788322.1| thiamine biosynthesis AtP pyrophosphatase [Lactobacillus casei str.
           Zhang]
 gi|239526130|gb|EEQ65131.1| thiamine biosynthesis ATP pyrophosphatase [Lactobacillus paracasei
           subsp. paracasei 8700:2]
 gi|300438706|gb|ADK18472.1| Thiamine biosynthesis ATP pyrophosphatase [Lactobacillus casei str.
           Zhang]
          Length = 405

 Score = 89.6 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 61/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A L+ SGG DS     +AL R   +E + F                  K  +L  K   
Sbjct: 179 KAALMLSGGIDSPVAGYYALKRGVDIEMVHFF------SPPYTSQQALNKAKQLTAKLTP 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G  + + +              +  +I+        +  +  + L     +A + G  
Sbjct: 233 YVGRIYFIEVPF----------TEIQEEIKAKVPEGYLMTVQRRLMLRLTEAIAQQRGDL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+   +   + + +  P+  + K E    A+ I  
Sbjct: 283 AIFNGESVGQVAS---------QTLESMAAINDVTTMPIIRPVATMDKNEIIAEAEKIDT 333

Query: 190 QDLVNLILEE 199
            DL  +  E+
Sbjct: 334 YDLSIMPFED 343


>gi|191638252|ref|YP_001987418.1| thiamine biosynthesis protein ThiI [Lactobacillus casei BL23]
 gi|238693031|sp|B3WDV9|THII_LACCB RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|190712554|emb|CAQ66560.1| Thiamine biosynthesis ATP pyrophosphorylase [Lactobacillus casei
           BL23]
 gi|327382282|gb|AEA53758.1| Probable tRNA sulfurtransferase [Lactobacillus casei LC2W]
 gi|327385478|gb|AEA56952.1| Probable tRNA sulfurtransferase [Lactobacillus casei BD-II]
          Length = 405

 Score = 89.6 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 61/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A L+ SGG DS     +AL R   +E + F                  K  +L  K   
Sbjct: 179 KAALMLSGGIDSPVAGYYALKRGVDIEMVHFF------SPPYTSQQALNKAKQLTAKLTP 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G  + + +              +  +I+        +  +  + L     +A + G  
Sbjct: 233 YVGRIYFIEVPF----------TEIQEEIKAKVPEGYLMTVQRRLMLRLTEAIAQQRGDL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+   +   + + +  P+  + K E    A+ I  
Sbjct: 283 AIFNGESVGQVAS---------QTLESMAAINDVTTMPIIRPVATMDKNEIIAEAEKIDT 333

Query: 190 QDLVNLILEE 199
            DL  +  E+
Sbjct: 334 YDLSIMPFED 343


>gi|116494740|ref|YP_806474.1| thiamine biosynthesis protein ThiI [Lactobacillus casei ATCC 334]
 gi|122263842|sp|Q039U0|THII_LACC3 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|116104890|gb|ABJ70032.1| Thiamine biosynthesis ATP pyrophosphatase [Lactobacillus casei ATCC
           334]
          Length = 405

 Score = 89.6 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 61/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A L+ SGG DS     +AL R   +E + F                  K  +L  K   
Sbjct: 179 KAALMLSGGIDSPVAGYYALKRGVDIEMVHFF------SPPYTSQQALNKAKQLTAKLTP 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G  + + +              +  +I+        +  +  + L     +A + G  
Sbjct: 233 YVGRIYFIEVPF----------TEIQEEIKAKVPEGYLMTVQRRLMLRLTEAIAQQRGDL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+   +   + + +  P+  + K E    A+ I  
Sbjct: 283 AIFNGESVGQVAS---------QTLESMAAINDVTTMPIIRPVATMDKNEIIAEAEKIDT 333

Query: 190 QDLVNLILEE 199
            DL  +  E+
Sbjct: 334 YDLSIMPFED 343


>gi|225375405|ref|ZP_03752626.1| hypothetical protein ROSEINA2194_01030 [Roseburia inulinivorans DSM
           16841]
 gi|225212741|gb|EEG95095.1| hypothetical protein ROSEINA2194_01030 [Roseburia inulinivorans DSM
           16841]
          Length = 393

 Score = 89.6 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 56/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R   ++   F                ++K+V+L    
Sbjct: 179 NGKAMLLLSGGIDSPVAGYMIAKRGVTIDATYFH------APPYTSERAKQKVVDLAKIV 232

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G  ++  +             ++ + I +               +  A   A    
Sbjct: 233 AKYSGPINLHVVNF----------TDIQLYIYEQCPHEELTIIMRRYMMKLAEHFAKENK 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +          + +++         + V+ PL+   K E   +++ I
Sbjct: 283 CLGLITGESIGQVAS---------QTMQSLAATNEVCTMPVYRPLIGFDKQEIVTISEKI 333

Query: 188 GGQDLVNLILEE 199
              +   L  E+
Sbjct: 334 DAYETSILPYED 345


>gi|331091340|ref|ZP_08340180.1| tRNA sulfurtransferase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330404501|gb|EGG84045.1| tRNA sulfurtransferase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 394

 Score = 89.6 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 58/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+LL SGG DS         R   +E   F                ++K+++L    
Sbjct: 180 NGKAMLLLSGGIDSPVAGYMISKRGVGLEATYFH------APPYTSERAKQKVIDLAKLV 233

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +             ++ + I D    +          +  A   A   G
Sbjct: 234 SKYSGPIKLNIVNF----------TDIQLYIYDKCPHDELTIIMRRYMMKIAEHFAKESG 283

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +          + +++ +       + V+ P++   K E   +A+ I
Sbjct: 284 CLGLITGESIGQVAS---------QTMQSLMATNDVCTLPVYRPVIGFDKQEIVDIAEKI 334

Query: 188 GGQDLVNLILEE 199
              +   L  E+
Sbjct: 335 DTYETSILPFED 346


>gi|223934227|ref|ZP_03626161.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           suis 89/1591]
 gi|223897108|gb|EEF63535.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           suis 89/1591]
          Length = 405

 Score = 89.6 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 54/187 (28%), Gaps = 25/187 (13%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           L+ SGG DS      AL R   +E L F                 KK  +L  K     G
Sbjct: 182 LMLSGGIDSPVAGYLALKRGVEIEALHF------ASPPYTSPGALKKAHDLTRKLTAFGG 235

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
               + +              +  +I++       +       +     +    G   I+
Sbjct: 236 NITFIEVPF----------TEIQEEIKEKAPEAYLMTLTRRFMMRITDRVREERGAMVII 285

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
            G      +         I A+             V  P++ + K E   +AQ+I   D+
Sbjct: 286 NGESLGQVASQTLESMHAINAVTNT---------PVIRPVVTMDKLEIIDIAQEIDTFDI 336

Query: 193 VNLILEE 199
                E+
Sbjct: 337 SIQPFED 343


>gi|85707500|ref|ZP_01038577.1| hypothetical protein ROS217_02745 [Roseovarius sp. 217]
 gi|85667980|gb|EAQ22864.1| hypothetical protein ROS217_02745 [Roseovarius sp. 217]
          Length = 446

 Score = 89.2 bits (219), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 70/233 (30%), Gaps = 17/233 (7%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           + LFSGG DS       L    R   +S                 +++++E++ +  D  
Sbjct: 147 VSLFSGGLDSLIGAIDLLASGQRPLLVSH-------YWDGEASSAQRQLLEVLKERHDGA 199

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
            E     +         + + N              V    +            L   N+
Sbjct: 200 FESVRAYIGFRKSDFAEAGSDNNQRARSFLFYSLAVVAADAVASTNKVLIPENGLIALNV 259

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
            +       S      H       + +   +   VT+  P  +  K E   +A++ G +D
Sbjct: 260 PMDAHRL-GSLSTRTAHPHFIRSMSQLVTALGVDVTLENPYRFKTKGE---MARECGDRD 315

Query: 192 LVNLILEESHTCYLGKRDK-RYEWGYGCNSCPACYLRQK----GWMEFK-EKY 238
           L+  +   S +C    + +        C  C  C +R+     G  E    KY
Sbjct: 316 LLAELAPVSMSCSHPAQVRFESAPPQHCGRCVPCLIRRASLAVGLDEADTTKY 368


>gi|323475964|gb|ADX86570.1| ExsB family protein [Sulfolobus islandicus REY15A]
          Length = 213

 Score = 89.2 bits (219), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 86/236 (36%), Gaps = 42/236 (17%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-RNKVELECRLCVRKKIV 61
           DI+K     LLLFS G DSS+   +   +    + L  +YGQ   +++L+    + +K+ 
Sbjct: 13  DIMKF----LLLFSSGLDSSSVAYYYAKKGLDFDCLFINYGQSSARMQLKYGKIICEKLK 68

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
             +         +  +    L                     P+  +  RN++ +  A  
Sbjct: 69  RRLIIINAKNLGEAFVNNDWLR--------------------PHEPIIHRNLVIVPIAIA 108

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            A + G   +++   + D    P+ R      +E    LG    V   TP +   KY   
Sbjct: 109 YAKQNGYERVIMATIKEDCEYEPNRR----DIMEKLKELGEILGVRFETPFVNFPKYLLL 164

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           K+    G      L    +++C LG +       Y C  C  C  R + + + K +
Sbjct: 165 KIGIKSG------LDPSITYSCLLGHK-------YHCGKCSQCLKRIEAFKQAKIR 207


>gi|313906354|ref|ZP_07839695.1| conserved hypothetical protein [Eubacterium cellulosolvens 6]
 gi|313468818|gb|EFR64179.1| conserved hypothetical protein [Eubacterium cellulosolvens 6]
          Length = 430

 Score = 89.2 bits (219), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 30/236 (12%), Positives = 68/236 (28%), Gaps = 22/236 (9%)

Query: 12  LLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           L +FSGG DS       L+    R   +S   G +   E +    +++K++E        
Sbjct: 144 LCMFSGGMDSYIGAINLLEENLGRTLFVSHYGGGKGTKEYQ--DYIKEKLIE-------- 193

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
             +  +         +          + +     +  V   + +       +     I+ 
Sbjct: 194 --KYSVEDRDFCQFYAKVVNGVEDTTRSRSFMFFSHAVALASALNKSVEVIIPENGLISL 251

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
            +        +      H    ++   +   +  +V    P  +  K E      +   Q
Sbjct: 252 NIPLSYSRIGTSSTRTTHPYYMSLFQKLVDNLGLNVQFRNPYQFKTKGEML---LECKNQ 308

Query: 191 DLVNLILEESHTCYLGKRDKRYEW--GYGCNSCPACYLRQKGWMEFKEK----YQD 240
           + +   +  + +C      +         C  C  C +RQ    +        Y+D
Sbjct: 309 EFMKNHVHHTMSCSHPDAGRMQGEKTARHCGYCVPCVIRQAALKKAGINDISSYRD 364


>gi|229823005|ref|ZP_04449075.1| hypothetical protein GCWU000282_00298 [Catonella morbi ATCC 51271]
 gi|229787818|gb|EEP23932.1| hypothetical protein GCWU000282_00298 [Catonella morbi ATCC 51271]
          Length = 404

 Score = 89.2 bits (219), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 56/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  ALL+ SGG DS       + R   +E + F                 +K  +L  + 
Sbjct: 178 SGRALLMLSGGIDSPVAGYQMMKRGLEIEAVHF------ASPPYTSPQAIEKTKKLTAQL 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                              H      +  +I+D    +  +     + L     L  R  
Sbjct: 232 AQYGR----------SLTYHCVPFTEIQEEIKDKVHDDFSMTIMRRMMLRVMEALLDRQQ 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +                  +   + V +  PL+ + K +    A+ I
Sbjct: 282 ADAIVTGESLGQVASQTLKSMR---------AINQVTSVPILRPLIAVDKNDIIVQAEAI 332

Query: 188 GGQDLVNLILEE 199
           G  ++ N   E+
Sbjct: 333 GTYEISNEPFED 344


>gi|330832713|ref|YP_004401538.1| thiamine biosynthesis protein [Streptococcus suis ST3]
 gi|329306936|gb|AEB81352.1| thiamine biosynthesis protein [Streptococcus suis ST3]
          Length = 405

 Score = 89.2 bits (219), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 54/187 (28%), Gaps = 25/187 (13%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           L+ SGG DS      AL R   +E L F                 KK  +L  K     G
Sbjct: 182 LMLSGGIDSPVAGYLALKRGVEIEALHF------ASPPYTSPGALKKAHDLTRKLTAFGG 235

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
               + +              +  +I++       +       +     +    G   I+
Sbjct: 236 NITFIEVPF----------TEIQEEIKEKAPEAYLMTLTRRFMMRITDRVREERGAMVII 285

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
            G      +         I A+             V  P++ + K E   +AQ+I   D+
Sbjct: 286 NGESLGQVASQTLESMQAINAVTNT---------PVIRPVVTMDKLEIIDIAQEIDTFDI 336

Query: 193 VNLILEE 199
                E+
Sbjct: 337 SIQPFED 343


>gi|302023686|ref|ZP_07248897.1| thiamine biosynthesis protein ThiI [Streptococcus suis 05HAS68]
          Length = 356

 Score = 89.2 bits (219), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 54/187 (28%), Gaps = 25/187 (13%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           L+ SGG DS      AL R   +E L F                 KK  +L  K     G
Sbjct: 182 LMLSGGIDSPVAGYLALKRGVEIEALHF------ASPPYTSPGALKKAHDLTRKLTAFGG 235

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
               + +              +  +I++       +       +     +    G   I+
Sbjct: 236 NITFIEVPF----------TEIQEEIKEKAPEAYLMTLTRRFMMRITDRVREERGAMVII 285

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
            G      +         I A+             V  P++ + K E   +AQ+I   D+
Sbjct: 286 NGESLGQVASQTLESMQAINAVTNT---------PVIRPVVTMDKLEIIDIAQEIDTFDI 336

Query: 193 VNLILEE 199
                E+
Sbjct: 337 SIQPFED 343


>gi|253755704|ref|YP_003028844.1| thiamine biosynthesis protein [Streptococcus suis BM407]
 gi|251818168|emb|CAZ55966.1| putative thiamine biosynthesis protein [Streptococcus suis BM407]
          Length = 405

 Score = 89.2 bits (219), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 54/187 (28%), Gaps = 25/187 (13%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           L+ SGG DS      AL R   +E L F                 KK  +L  K     G
Sbjct: 182 LMLSGGIDSPVAGYLALKRGVEIEALHF------ASPPYTSPGALKKAHDLTRKLTAFGG 235

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
               + +              +  +I++       +       +     +    G   I+
Sbjct: 236 NITFIEVPF----------TEIQEEIKEKAPEAYLMTLTRRFMMRITDRVREERGAMVII 285

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
            G      +         I A+             V  P++ + K E   +AQ+I   D+
Sbjct: 286 NGESLGQVASQTLESMQAINAVTNT---------PVIRPVVTMDKLEIIDIAQEIDTFDI 336

Query: 193 VNLILEE 199
                E+
Sbjct: 337 SIQPFED 343


>gi|146318431|ref|YP_001198143.1| thiamine biosynthesis protein ThiI [Streptococcus suis 05ZYH33]
 gi|146320623|ref|YP_001200334.1| thiamine biosynthesis protein ThiI [Streptococcus suis 98HAH33]
 gi|253751569|ref|YP_003024710.1| thiamine biosynthesis protein [Streptococcus suis SC84]
 gi|253753470|ref|YP_003026611.1| thiamine biosynthesis protein [Streptococcus suis P1/7]
 gi|189030667|sp|A4W0P5|THII_STRS2 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|189030669|sp|A4VUF4|THII_STRSY RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|145689237|gb|ABP89743.1| Thiamine biosynthesis ATP pyrophosphatase [Streptococcus suis
           05ZYH33]
 gi|145691429|gb|ABP91934.1| Thiamine biosynthesis ATP pyrophosphatase [Streptococcus suis
           98HAH33]
 gi|251815858|emb|CAZ51468.1| putative thiamine biosynthesis protein [Streptococcus suis SC84]
 gi|251819716|emb|CAR45551.1| putative thiamine biosynthesis protein [Streptococcus suis P1/7]
 gi|292558219|gb|ADE31220.1| Thiamine biosynthesis protein [Streptococcus suis GZ1]
 gi|319758003|gb|ADV69945.1| thiamine biosynthesis protein ThiI [Streptococcus suis JS14]
          Length = 405

 Score = 89.2 bits (219), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 54/187 (28%), Gaps = 25/187 (13%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           L+ SGG DS      AL R   +E L F                 KK  +L  K     G
Sbjct: 182 LMLSGGIDSPVAGYLALKRGVEIEALHF------ASPPYTSPGALKKAHDLTRKLTAFGG 235

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
               + +              +  +I++       +       +     +    G   I+
Sbjct: 236 NITFIEVPF----------TEIQEEIKEKAPEAYLMTLTRRFMMRITDRVREERGAMVII 285

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
            G      +         I A+             V  P++ + K E   +AQ+I   D+
Sbjct: 286 NGESLGQVASQTLESMQAINAVTNT---------PVIRPVVTMDKLEIIDIAQEIDTFDI 336

Query: 193 VNLILEE 199
                E+
Sbjct: 337 SIQPFED 343


>gi|161507290|ref|YP_001577244.1| thiamine biosynthesis protein ThiI [Lactobacillus helveticus DPC
           4571]
 gi|189030635|sp|A8YUL5|THII_LACH4 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|160348279|gb|ABX26953.1| Thiazole biosynthesis protein [Lactobacillus helveticus DPC 4571]
          Length = 405

 Score = 89.2 bits (219), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 64/190 (33%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS      A+ R   +E + F                  K  EL     +
Sbjct: 179 KAVMMLSGGIDSPVASYLAMKRGVDIEMVHFF------SPPYTTEKALAKAKELTGILAN 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G+ + + +              +   I++       +  +    L  A  +  + G  
Sbjct: 233 YVGKINFIAVPFA----------EIQETIKEKLPEGYLMTVQRRFMLQLADRIRAKRGGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +++ + +   +   V  P+  + K E  KLA+DIG 
Sbjct: 283 AIFNGESVGQVAS---------QTLQSMVAINDVTTTPVIRPVATMDKTEIIKLAEDIGT 333

Query: 190 QDLVNLILEE 199
            DL     E+
Sbjct: 334 FDLSIQPFED 343


>gi|258508254|ref|YP_003171005.1| thiamine biosynthesis protein ThiI [Lactobacillus rhamnosus GG]
 gi|257148181|emb|CAR87154.1| Thiamine biosynthesis protein thiI [Lactobacillus rhamnosus GG]
 gi|259649571|dbj|BAI41733.1| thiamine biosynthesis ATP pyrophosphatase [Lactobacillus rhamnosus
           GG]
          Length = 405

 Score = 89.2 bits (219), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 60/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A L+ SGG DS     +AL R   +E + F                  K  +L  K   
Sbjct: 179 RAALMLSGGIDSPVAGYYALKRGVDIEMVHFF------SPPYTSQQALNKAKQLTAKLTP 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G  + + +              +   ++        +  +  + L     +A + G  
Sbjct: 233 YVGRIYFIEVPF----------TEIQEAVKATVPEGYLMTVQRRMMLRLTEAIAKQRGDL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+   +   + + +  P+  + K E    A+ I  
Sbjct: 283 AIFNGESVGQVAS---------QTLESMAAINDVTTMPIIRPVATMDKNEIIAEAEKIDT 333

Query: 190 QDLVNLILEE 199
            DL  +  E+
Sbjct: 334 YDLSIMPFED 343


>gi|199597499|ref|ZP_03210928.1| Thiamine biosynthesis ATP pyrophosphatase [Lactobacillus rhamnosus
           HN001]
 gi|229552051|ref|ZP_04440776.1| thiamine-phosphate kinase [Lactobacillus rhamnosus LMS2-1]
 gi|258539465|ref|YP_003173964.1| thiamine biosynthesis protein ThiI [Lactobacillus rhamnosus Lc 705]
 gi|199591522|gb|EDY99599.1| Thiamine biosynthesis ATP pyrophosphatase [Lactobacillus rhamnosus
           HN001]
 gi|229314628|gb|EEN80601.1| thiamine-phosphate kinase [Lactobacillus rhamnosus LMS2-1]
 gi|257151141|emb|CAR90113.1| Thiamine biosynthesis protein thiI [Lactobacillus rhamnosus Lc 705]
          Length = 405

 Score = 89.2 bits (219), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 60/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A L+ SGG DS     +AL R   +E + F                  K  +L  K   
Sbjct: 179 RAALMLSGGIDSPVAGYYALKRGVDIEMVHFF------SPPYTSQQALNKAKQLTAKLTP 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G  + + +              +   ++        +  +  + L     +A + G  
Sbjct: 233 YVGRIYFIEVPF----------TEIQEAVKATVPEGYLMTVQRRMMLRLTEAIAKQRGDL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+   +   + + +  P+  + K E    A+ I  
Sbjct: 283 AIFNGESVGQVAS---------QTLESMAAINDVTTMPIIRPVATMDKNEIIAEAEKIDT 333

Query: 190 QDLVNLILEE 199
            DL  +  E+
Sbjct: 334 YDLSIMPFED 343


>gi|188586959|ref|YP_001918504.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|229559992|sp|B2A8M8|THII_NATTJ RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|179351646|gb|ACB85916.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 413

 Score = 88.8 bits (218), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 56/190 (29%), Gaps = 20/190 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +L+ SGG DS      A+ R  +V  L F                 KK+ ++      
Sbjct: 185 KGVLMLSGGIDSPVAGWLAMKRGIQVVGLHFH------SYPFTSQRALKKVEDISQVLSR 238

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                        G    ++   ++   IQ+    + +V          A  +A +    
Sbjct: 239 YGTG------PTGGFKLITNHFTDIQKAIQNYCSESMWVTVMRRFMFYIANRMAQKEQAM 292

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      +         +             ++ +  PL  L K E    A+ IG 
Sbjct: 293 TVVTGENVGQVASQTLESMHAVSQD--------VVNLPILRPLAGLDKKEIMSKAETIGT 344

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 345 YDISIRPYED 354


>gi|291545271|emb|CBL18380.1| Thiamine biosynthesis ATP pyrophosphatase [Ruminococcus sp. 18P13]
          Length = 391

 Score = 88.8 bits (218), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 53/192 (27%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  ALLL SGG DS         R   V  + F                  K+  L  K 
Sbjct: 177 SGRALLLLSGGIDSPVAGYMMAKRGICVSAIHF------ISPPYTSERALLKVETLAEKI 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G      +              +   I+D      F      + +  A  +A R G
Sbjct: 231 VPYCGSMAFFCVPF----------TKIQETIKDQCPEELFTVIMRRLMMEVAQQIADREG 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +           A+           + V  PL+ + K E   +++ I
Sbjct: 281 CLALITGESVGQVASQTMQALCATDAVCR---------MPVFRPLIGMDKTEIIAISRKI 331

Query: 188 GGQDLVNLILEE 199
              D      E+
Sbjct: 332 DTYDTSIEPYED 343


>gi|315282529|ref|ZP_07870921.1| thiamine biosynthesis/tRNA modification protein ThiI [Listeria
           marthii FSL S4-120]
 gi|313613832|gb|EFR87584.1| thiamine biosynthesis/tRNA modification protein ThiI [Listeria
           marthii FSL S4-120]
          Length = 403

 Score = 88.8 bits (218), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A  R   +E + F                ++K ++L  K 
Sbjct: 177 SGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHFH------SPPYTSEQAKQKAIDLAAKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  +              +   I+     +  +     + L     L  +  
Sbjct: 231 AKYSGQVQMHIVPF----------TEIQEVIKQQIPESVIMTVTRRMMLRITDELRRKRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+             +  P++ + K E  ++AQ I
Sbjct: 281 GLAIVNGESLGQVASQTLESMLAINAVTAT---------PIIRPVVSMDKNEIIQIAQKI 331

Query: 188 GGQDLVNLILEE 199
              +L     E+
Sbjct: 332 DTYNLSVQPFED 343


>gi|313608552|gb|EFR84436.1| thiamine biosynthesis/tRNA modification protein ThiI [Listeria
           monocytogenes FSL F2-208]
          Length = 403

 Score = 88.8 bits (218), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A  R   +E + F                ++K ++L  K 
Sbjct: 177 SGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHFH------SPPYTSEQAKQKAIDLAAKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  +              +   I+     +  +     + L     L  +  
Sbjct: 231 AKYSGQVQMHIVPF----------TEIQEVIKQQIPESVIMTVTRRMMLRITDELRRKRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+             +  P++ + K E  ++AQ I
Sbjct: 281 GLAIVNGESLGQVASQTLESMLAINAVTAT---------PIIRPVVSMDKNEIIQIAQKI 331

Query: 188 GGQDLVNLILEE 199
              +L     E+
Sbjct: 332 DTYNLSVQPFED 343


>gi|255029387|ref|ZP_05301338.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes LO28]
          Length = 360

 Score = 88.8 bits (218), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A  R   +E + F                ++K ++L  K 
Sbjct: 177 SGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHFH------SPPYTSEQAKQKAIDLAAKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  +              +   I+     +  +     + L     L  +  
Sbjct: 231 AKYSGQVQMHIVPF----------TEIQEVIKQQIPESVIMTVTRRMMLRITDELRRKRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+             +  P++ + K E  ++AQ I
Sbjct: 281 GLAIVNGESLGQVASQTLESMLAINAVTAT---------PIIRPVVSMDKNEIIQIAQKI 331

Query: 188 GGQDLVNLILEE 199
              +L     E+
Sbjct: 332 DTYNLSVQPFED 343


>gi|217964254|ref|YP_002349932.1| thiamine biosynthesis/tRNA modification protein ThiI [Listeria
           monocytogenes HCC23]
 gi|290894498|ref|ZP_06557454.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes FSL
           J2-071]
 gi|254784227|sp|B8DHE9|THII_LISMH RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|217333524|gb|ACK39318.1| thiamine biosynthesis/tRNA modification protein ThiI [Listeria
           monocytogenes HCC23]
 gi|290555953|gb|EFD89511.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes FSL
           J2-071]
 gi|307571178|emb|CAR84357.1| thiamine biosynthesis protein [Listeria monocytogenes L99]
          Length = 403

 Score = 88.8 bits (218), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A  R   +E + F                ++K ++L  K 
Sbjct: 177 SGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHFH------SPPYTSEQAKQKAIDLAAKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  +              +   I+     +  +     + L     L  +  
Sbjct: 231 AKYSGQVQMHIVPF----------TEIQEVIKQQIPESVIMTVTRRMMLRITDELRRKRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+             +  P++ + K E  ++AQ I
Sbjct: 281 GLAIVNGESLGQVASQTLESMLAINAVTAT---------PIIRPVVSMDKNEIIQIAQKI 331

Query: 188 GGQDLVNLILEE 199
              +L     E+
Sbjct: 332 DTYNLSVQPFED 343


>gi|16803632|ref|NP_465117.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes EGD-e]
 gi|224499174|ref|ZP_03667523.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes Finland
           1988]
 gi|224501468|ref|ZP_03669775.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes FSL
           R2-561]
 gi|254828173|ref|ZP_05232860.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes FSL
           N3-165]
 gi|254831993|ref|ZP_05236648.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes 10403S]
 gi|284801984|ref|YP_003413849.1| hypothetical protein LM5578_1739 [Listeria monocytogenes 08-5578]
 gi|284995126|ref|YP_003416894.1| hypothetical protein LM5923_1691 [Listeria monocytogenes 08-5923]
 gi|20140606|sp|Q8Y6U0|THII_LISMO RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|16411021|emb|CAC99670.1| lmo1592 [Listeria monocytogenes EGD-e]
 gi|258600560|gb|EEW13885.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes FSL
           N3-165]
 gi|284057546|gb|ADB68487.1| hypothetical protein LM5578_1739 [Listeria monocytogenes 08-5578]
 gi|284060593|gb|ADB71532.1| hypothetical protein LM5923_1691 [Listeria monocytogenes 08-5923]
          Length = 403

 Score = 88.8 bits (218), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A  R   +E + F                ++K ++L  K 
Sbjct: 177 SGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHFH------SPPYTSEQAKQKAIDLAAKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  +              +   I+     +  +     + L     L  +  
Sbjct: 231 AKYSGQVQMHIVPF----------TEIQEVIKQQIPESVIMTVTRRMMLRITDELRRKRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+             +  P++ + K E  ++AQ I
Sbjct: 281 GLAIVNGESLGQVASQTLESMLAINAVTAT---------PIIRPVVSMDKNEIIQIAQKI 331

Query: 188 GGQDLVNLILEE 199
              +L     E+
Sbjct: 332 DTYNLSVQPFED 343


>gi|47096805|ref|ZP_00234387.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes str.
           1/2a F6854]
 gi|254898241|ref|ZP_05258165.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes J0161]
 gi|254912266|ref|ZP_05262278.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes J2818]
 gi|254936593|ref|ZP_05268290.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes F6900]
 gi|47014838|gb|EAL05789.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes str.
           1/2a F6854]
 gi|258609189|gb|EEW21797.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes F6900]
 gi|293590244|gb|EFF98578.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes J2818]
          Length = 403

 Score = 88.8 bits (218), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A  R   +E + F                ++K ++L  K 
Sbjct: 177 SGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHFH------SPPYTSEQAKQKAIDLAAKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  +              +   I+     +  +     + L     L  +  
Sbjct: 231 AKYSGQVQMHIVPF----------TEIQEVIKQQIPESVIMTVTRRMMLRITDELRRKRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+             +  P++ + K E  ++AQ I
Sbjct: 281 GLAIVNGESLGQVASQTLESMLAINAVTAT---------PIIRPVVSMDKNEIIQIAQKI 331

Query: 188 GGQDLVNLILEE 199
              +L     E+
Sbjct: 332 DTYNLSVQPFED 343


>gi|260438503|ref|ZP_05792319.1| thiamine biosynthesis/tRNA modification protein ThiI [Butyrivibrio
           crossotus DSM 2876]
 gi|292809092|gb|EFF68297.1| thiamine biosynthesis/tRNA modification protein ThiI [Butyrivibrio
           crossotus DSM 2876]
          Length = 393

 Score = 88.8 bits (218), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 60/192 (31%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A LL SGG DS         R   ++ + F                ++K+V+L    
Sbjct: 180 NGKATLLLSGGIDSPVAGYMIAKRGVIIDAVYFH------APPYTSDRAKQKVVDLAKLV 233

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +  G  ++  +             ++ + I +    +          +  A   A +  
Sbjct: 234 ANYSGPINLHVVNF----------TDIQLYIYEQCPHDELTIIMRRYMMKIAEYFALKED 283

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +          + +++         + V  PL+ + K E   +++ I
Sbjct: 284 SLGLITGESIGQVAS---------QTMQSLAVTNEVCTLPVLRPLVGMDKQEIINISEKI 334

Query: 188 GGQDLVNLILEE 199
           G  +   L  E+
Sbjct: 335 GTYETSILPFED 346


>gi|227877296|ref|ZP_03995369.1| thiamine-phosphate kinase [Lactobacillus crispatus JV-V01]
 gi|227863152|gb|EEJ70598.1| thiamine-phosphate kinase [Lactobacillus crispatus JV-V01]
          Length = 405

 Score = 88.8 bits (218), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 61/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS      AL R   +E + F                  K  EL     +
Sbjct: 179 KAVMMLSGGIDSPVASWLALKRGVDIEMVHFF------SPPYTTEKALAKAKELTGILAN 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+ + + +              +   I++       +  +    L  A  +  + G  
Sbjct: 233 YAGKINFIAVPFA----------EIQETIKEKLPEGYLMTVQRRFMLQLADRIRAQRGGW 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +++ + +   +   V  P+  + K E    A++IG 
Sbjct: 283 AIFNGESVGQVAS---------QTLQSMVAINDVTTTPVIRPVATMDKTEIIAKAEEIGT 333

Query: 190 QDLVNLILEE 199
            DL     E+
Sbjct: 334 FDLSIQPFED 343


>gi|332312034|gb|EGJ25129.1| Putative tRNA sulfurtransferase [Listeria monocytogenes str. Scott
           A]
          Length = 398

 Score = 88.8 bits (218), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A  R   +E + F                ++K V+L  K 
Sbjct: 172 SGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHFH------SPPYTSEQAKQKAVDLAAKL 225

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  +              +   I+     +  +     + L     L  R  
Sbjct: 226 AKYSGQVQMHIVPF----------TEIQEVIKQQIPESVIMTVTRRMMLRITDELRRRRN 275

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+             +  P++ + K E  ++AQ I
Sbjct: 276 GLAIVNGESLGQVASQTLESMLAINAVTAT---------PIIRPVVSMDKNEIIQIAQKI 326

Query: 188 GGQDLVNLILEE 199
              +L     E+
Sbjct: 327 DTYNLSVQPFED 338


>gi|328464959|gb|EGF36238.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes 1816]
          Length = 380

 Score = 88.8 bits (218), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A  R   +E + F                ++K V+L  K 
Sbjct: 154 SGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHFH------SPPYTSEQAKQKAVDLAAKL 207

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  +              +   I+     +  +     + L     L  R  
Sbjct: 208 AKYSGQVQMHIVPF----------TEIQEVIKQQIPESVIMTVTRRMMLRITDELRRRRN 257

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+             +  P++ + K E  ++AQ I
Sbjct: 258 GLAIVNGESLGQVASQTLESMLAINAVTAT---------PIIRPVVSMDKNEIIQIAQKI 308

Query: 188 GGQDLVNLILEE 199
              +L     E+
Sbjct: 309 DTYNLSVQPFED 320


>gi|254993739|ref|ZP_05275929.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes FSL
           J2-064]
          Length = 335

 Score = 88.8 bits (218), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A  R   +E + F                ++K V+L  K 
Sbjct: 154 SGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHFH------SPPYTSEQAKQKAVDLAAKL 207

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  +              +   I+     +  +     + L     L  R  
Sbjct: 208 AKYSGQVQMHIVPF----------TEIQEVIKQQIPESVIMTVTRRMMLRITDELRRRRN 257

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+             +  P++ + K E  ++AQ I
Sbjct: 258 GLAIVNGESLGQVASQTLESMLAINAVTAT---------PIIRPVVSMDKNEIIQIAQKI 308

Query: 188 GGQDLVNLILEE 199
              +L     E+
Sbjct: 309 DTYNLSVQPFED 320


>gi|46907823|ref|YP_014212.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes serotype
           4b str. F2365]
 gi|226224193|ref|YP_002758300.1| thiamin biosynthesis protein ThiI [Listeria monocytogenes
           Clip81459]
 gi|254824349|ref|ZP_05229350.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|254852214|ref|ZP_05241562.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes FSL
           R2-503]
 gi|254931532|ref|ZP_05264891.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes HPB2262]
 gi|300765983|ref|ZP_07075954.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes FSL
           N1-017]
 gi|67461976|sp|Q71Z75|THII_LISMF RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|259518565|sp|C1KVN9|THII_LISMC RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|46881092|gb|AAT04389.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes serotype
           4b str. F2365]
 gi|225876655|emb|CAS05364.1| Putative thiamin biosynthesis protein ThiI [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
 gi|258605521|gb|EEW18129.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes FSL
           R2-503]
 gi|293583086|gb|EFF95118.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes HPB2262]
 gi|293593583|gb|EFG01344.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|300513301|gb|EFK40377.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes FSL
           N1-017]
 gi|328474826|gb|EGF45630.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes 220]
          Length = 403

 Score = 88.8 bits (218), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A  R   +E + F                ++K V+L  K 
Sbjct: 177 SGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHFH------SPPYTSEQAKQKAVDLAAKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  +              +   I+     +  +     + L     L  R  
Sbjct: 231 AKYSGQVQMHIVPF----------TEIQEVIKQQIPESVIMTVTRRMMLRITDELRRRRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+             +  P++ + K E  ++AQ I
Sbjct: 281 GLAIVNGESLGQVASQTLESMLAINAVTAT---------PIIRPVVSMDKNEIIQIAQKI 331

Query: 188 GGQDLVNLILEE 199
              +L     E+
Sbjct: 332 DTYNLSVQPFED 343


>gi|47093454|ref|ZP_00231218.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes str. 4b
           H7858]
 gi|47018182|gb|EAL08951.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes str. 4b
           H7858]
          Length = 398

 Score = 88.8 bits (218), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A  R   +E + F                ++K V+L  K 
Sbjct: 172 SGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHFH------SPPYTSEQAKQKAVDLAAKL 225

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  +              +   I+     +  +     + L     L  R  
Sbjct: 226 AKYSGQVQMHIVPF----------TEIQEVIKQQIPESVIMTVTRRMMLRITDELRRRRN 275

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+             +  P++ + K E  ++AQ I
Sbjct: 276 GLAIVNGESLGQVASQTLESMLAINAVTAT---------PIIRPVVSMDKNEIIQIAQKI 326

Query: 188 GGQDLVNLILEE 199
              +L     E+
Sbjct: 327 DTYNLSVQPFED 338


>gi|15897467|ref|NP_342072.1| hypothetical protein SSO0544 [Sulfolobus solfataricus P2]
 gi|284175915|ref|ZP_06389884.1| hypothetical protein Ssol98_14833 [Sulfolobus solfataricus 98/2]
 gi|6015928|emb|CAB57755.1| hypothetical protein [Sulfolobus solfataricus P2]
 gi|13813706|gb|AAK40862.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
 gi|261602212|gb|ACX91815.1| Queuosine synthesis-like protein [Sulfolobus solfataricus 98/2]
          Length = 245

 Score = 88.4 bits (217), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 64/231 (27%), Gaps = 44/231 (19%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++  +GG DS+    +       +      YG   +++        + + EL  K
Sbjct: 1   MVEEAIIQLTGGIDSTVLAYYLKKDKYVLHGTFIHYGYPPQIKE------LELVKELSKK 54

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                    I+  +            ++   I+   +            L          
Sbjct: 55  LD---IPLKIIDFSSYIKSFDLPPIDSIQYIIKYQFVVEILASFSAYPNLNTMFV----- 106

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                               + +    I    ++       V  P   + K E  KL  +
Sbjct: 107 -----------------GWLKDEWNNRISLLKDIESLMGFKVIAPFHTMVKSEVIKLGNE 149

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +G      +   ++H+C +  +         C  C AC  R++ + E K K
Sbjct: 150 LG------VDFTKTHSCIVSGK-------MHCGICMACRSRRRAFEEVKVK 187


>gi|302338413|ref|YP_003803619.1| thiamine biosynthesis/tRNA modification protein ThiI [Spirochaeta
           smaragdinae DSM 11293]
 gi|301635598|gb|ADK81025.1| thiamine biosynthesis/tRNA modification protein ThiI [Spirochaeta
           smaragdinae DSM 11293]
          Length = 404

 Score = 88.4 bits (217), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 51/190 (26%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS         R  +++ + F                  K+ +L      
Sbjct: 179 KGVVLLSGGIDSPVAAFLMAKRGLKLDAVYFH------AYPYTSNEALDKVKKLAEILAP 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G   +  +                + ++                +  A  +A   G  
Sbjct: 233 YTGGIRLHVIPF----------TEAQIFMKQRGRSEELTLHMRAAMVEIADMVAADTGAK 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G   +  +           +              +  P++ L K E   +A+ IG 
Sbjct: 283 ALVTGEALSQVASQTIESITLTGSFAQR---------PIFRPVIGLDKEEIITIARRIGT 333

Query: 190 QDLVNLILEE 199
            +   L  E+
Sbjct: 334 FETSILPYED 343


>gi|154687079|ref|YP_001422240.1| thiamine biosynthesis protein ThiI [Bacillus amyloliquefaciens
           FZB42]
 gi|189030618|sp|A7Z7N3|THII_BACA2 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|154352930|gb|ABS75009.1| ThiI [Bacillus amyloliquefaciens FZB42]
          Length = 401

 Score = 88.4 bits (217), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 58/190 (30%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+L+ SGG DS     +A+ R   VE + F                ++K+++L      
Sbjct: 179 KAMLMLSGGFDSPVAGFYAMKRGLSVEAVHFF------SPPYTSERAKQKVMDLAGCLAK 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G   +  +                  IQ     N  +     + L  A  +       
Sbjct: 233 FGGSMTLHIVPF----------TKTQELIQKQIPENYTMTATRRLMLQIADRIREERKAL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I+ G      +         I A+             +  PL+ + K E  + +++IG 
Sbjct: 283 AIITGESLGQVASQTLESMYAINAVTAT---------PILRPLIGMDKTEIIEKSKEIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 YETSIQPFED 343


>gi|295425097|ref|ZP_06817802.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           amylolyticus DSM 11664]
 gi|295065156|gb|EFG56059.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           amylolyticus DSM 11664]
          Length = 406

 Score = 88.4 bits (217), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 60/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS      A+ R   +E + F                  K  EL     +
Sbjct: 180 KAVMMLSGGIDSPVASYLAMKRGVEIEMVHFF------SPPYTTEKALAKAKELTGILAN 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+ + + +              +   I++       +  +    L  A  +  + G  
Sbjct: 234 YCGKINFIAVPFA----------EIQETIKEKIPEGYLMTVQRRFMLQLADRIRAKRGGL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +++ + +   +   V  P+  + K E    A+ IG 
Sbjct: 284 AIFNGESVGQVAS---------QTLQSMVAINDVTTTPVIRPVATMDKTEIIDRAEKIGT 334

Query: 190 QDLVNLILEE 199
            DL     E+
Sbjct: 335 FDLSIQPFED 344


>gi|238924262|ref|YP_002937778.1| thiamine biosynthesis ATP pyrophosphatase [Eubacterium rectale ATCC
           33656]
 gi|259518559|sp|C4ZAY9|THII_EUBR3 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|238875937|gb|ACR75644.1| thiamine biosynthesis ATP pyrophosphatase [Eubacterium rectale ATCC
           33656]
 gi|291525038|emb|CBK90625.1| thiazole biosynthesis/tRNA modification protein ThiI [Eubacterium
           rectale DSM 17629]
 gi|291529133|emb|CBK94719.1| thiazole biosynthesis/tRNA modification protein ThiI [Eubacterium
           rectale M104/1]
          Length = 394

 Score = 88.4 bits (217), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 57/190 (30%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+LL SGG DS         R   +    F                ++K+V+L  K   
Sbjct: 181 KAMLLLSGGIDSPVAGYMIAKRGVVINATYFH------APPYTSERAKQKVVDLAKKVAR 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G   +  +             ++ + I +    +          +  A   A      
Sbjct: 235 YSGRIKLHVVNF----------TDIQLAIYEKCPHDELTIIMRRYMMKIAEHFADEDKCL 284

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++ G      +          + +++        H+ V+ PL+ + K +   ++  I  
Sbjct: 285 GLITGESIGQVAS---------QTMQSLAATNEVCHMPVYRPLIAMDKNDIIDISNKIDT 335

Query: 190 QDLVNLILEE 199
            +   L  E+
Sbjct: 336 YETSILPYED 345


>gi|315038027|ref|YP_004031595.1| thiamine biosynthesis protein ThiI [Lactobacillus amylovorus GRL
           1112]
 gi|325956479|ref|YP_004291891.1| thiamine biosynthesis protein ThiI [Lactobacillus acidophilus 30SC]
 gi|312276160|gb|ADQ58800.1| thiamine biosynthesis protein ThiI [Lactobacillus amylovorus GRL
           1112]
 gi|325333044|gb|ADZ06952.1| thiamine biosynthesis protein ThiI [Lactobacillus acidophilus 30SC]
 gi|327183307|gb|AEA31754.1| thiamine biosynthesis protein ThiI [Lactobacillus amylovorus GRL
           1118]
          Length = 405

 Score = 88.4 bits (217), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 63/190 (33%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS      A+ R   +E + F                  K  EL     +
Sbjct: 179 KAVMMLSGGIDSPVASYLAMKRGVDIEMVHFF------SPPYTTEKALAKAKELTGILAN 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+ + + +              +   I++       +  +    L  A  +  + G  
Sbjct: 233 YAGKINFIAVPFA----------EIQETIKEKLPEGYLMTVQRRFMLQLADRIRAKRGGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +++ + +   +   V  P+  + K E  KLA+DIG 
Sbjct: 283 AIFNGESVGQVAS---------QTLQSMVAINDVTTTPVIRPVATMDKTEIIKLAEDIGT 333

Query: 190 QDLVNLILEE 199
            DL     E+
Sbjct: 334 FDLSIQPFED 343


>gi|260102594|ref|ZP_05752831.1| thiamine biosynthesis protein ThiI [Lactobacillus helveticus DSM
           20075]
 gi|260083621|gb|EEW67741.1| thiamine biosynthesis protein ThiI [Lactobacillus helveticus DSM
           20075]
 gi|323466843|gb|ADX70530.1| Probable tRNA sulfurtransferase [Lactobacillus helveticus H10]
          Length = 405

 Score = 88.4 bits (217), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 63/190 (33%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS      A+ R   +E + F                  K  EL     +
Sbjct: 179 KAVMMLSGGIDSPVASYLAMKRGVDIEMVHFF------SPPYTTEKALAKAKELTGILAN 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+ + + +              +   I++       +  +    L  A  +  + G  
Sbjct: 233 YAGKINFIAVPFA----------EIQETIKEKLPEGYLMTVQRRFMLQLADRIRAKRGGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +++ + +   +   V  P+  + K E  KLA+DIG 
Sbjct: 283 AIFNGESVGQVAS---------QTLQSMVAINDVTTTPVIRPVATMDKTEIIKLAEDIGT 333

Query: 190 QDLVNLILEE 199
            DL     E+
Sbjct: 334 FDLSIQPFED 343


>gi|332159234|ref|YP_004424513.1| Putative thiamine biosynthesis protein THII [Pyrococcus sp. NA2]
 gi|331034697|gb|AEC52509.1| Putative thiamine biosynthesis protein THII [Pyrococcus sp. NA2]
          Length = 363

 Score = 88.4 bits (217), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 62/189 (32%), Gaps = 25/189 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L SGG DS       L R   V  L FD G            V +K+VE++ ++  
Sbjct: 167 KVVALLSGGIDSPVAAFLMLKRGAEVVALHFDQG-------TNAKAVVEKVVEILSEYSP 219

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E  +         +H  + K     + D            I  L  AA +A  +G  
Sbjct: 220 DPIELIV--------ENHFEVLKPYVQALTDIKRREWTCVICKIAMLKRAAEIAREIGAL 271

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + +       +  +  ++ PL+   K E   +A+ IG 
Sbjct: 272 GIVTGDSLGQVAS---------QTLSNLYFETVSINFPIYRPLIGFDKEEIVNIAKKIGT 322

Query: 190 QD-LVNLIL 197
            +  +    
Sbjct: 323 YEAFLEFPY 331


>gi|154504514|ref|ZP_02041252.1| hypothetical protein RUMGNA_02018 [Ruminococcus gnavus ATCC 29149]
 gi|153794996|gb|EDN77416.1| hypothetical protein RUMGNA_02018 [Ruminococcus gnavus ATCC 29149]
          Length = 393

 Score = 88.4 bits (217), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             SA+LL SGG DS         R   +E   F                ++K+V+L    
Sbjct: 180 NGSAMLLLSGGIDSPVAGYMIAKRGVALEATYFH------APPYTSERAKEKVVDLARLV 233

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +             ++ + I +               +  A   A + G
Sbjct: 234 SRYSGPIKLNVVNF----------TDIQLYIYEKCPHEELTIIMRRYMMKIAEHFAKQDG 283

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +           A            + V+ PL+   K E   +++ I
Sbjct: 284 CLGLITGESIGQVASQTMQSLMATNAA---------CTLPVYRPLIGFDKKEIVDISEKI 334

Query: 188 GGQDLVNLILEE 199
              +      E+
Sbjct: 335 DTYETSIQPYED 346


>gi|126698334|ref|YP_001087231.1| thiamine biosynthesis protein ThiI [Clostridium difficile 630]
 gi|123363486|sp|Q189U8|THII_CLOD6 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|115249771|emb|CAJ67588.1| Thiamine biosynthesis protein ThiI [Clostridium difficile]
          Length = 391

 Score = 88.4 bits (217), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 56/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+ L SGG DS         R   VE + F                ++K+ +L    
Sbjct: 179 NGRAMSLLSGGIDSPVATWMVAKRGMEVEAVHFH------SYPFTSERSQEKVKDLAKIL 232

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  + IL           +   I +N              +  A  L+ +  
Sbjct: 233 AKYCGRVRLHKVNIL----------EIQKAIGENCNEEEATILSRRFMMRIAQRLSEKRH 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +           A+           + V  PL+ + K +   +A+ I
Sbjct: 283 CDALITGESIGQVASQTIQGLTCTNAV---------VDLPVFRPLIAMDKSDIVDIAKKI 333

Query: 188 GGQDLVNLILEE 199
           G  +   +  E+
Sbjct: 334 GTFETSIVPEED 345


>gi|313618712|gb|EFR90637.1| thiamine biosynthesis/tRNA modification protein ThiI [Listeria
           innocua FSL S4-378]
          Length = 403

 Score = 88.4 bits (217), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A  R   +E + F                ++K ++L  K 
Sbjct: 177 SGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHFH------SPPYTSEQAKQKAIDLAGKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  +              +   I+     +  +     + L     L  +  
Sbjct: 231 AKYSGQVQMHIVPF----------TEIQEVIKQQIPESVIMTVTRRMMLRITDELRRKRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+             +  P++ + K E  ++AQ I
Sbjct: 281 GLAIVNGESLGQVASQTLESMLAINAVTAT---------PIIRPVVAMDKNEIIQIAQKI 331

Query: 188 GGQDLVNLILEE 199
              +L     E+
Sbjct: 332 DTYNLSVQPFED 343


>gi|16800702|ref|NP_470970.1| thiamine biosynthesis protein ThiI [Listeria innocua Clip11262]
 gi|20140657|sp|Q92BB6|THII_LISIN RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|16414121|emb|CAC96865.1| lin1634 [Listeria innocua Clip11262]
          Length = 403

 Score = 88.4 bits (217), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A  R   +E + F                ++K ++L  K 
Sbjct: 177 SGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHFH------SPPYTSEQAKQKAIDLAGKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  +              +   I+     +  +     + L     L  +  
Sbjct: 231 AKYSGQVQMHIVPF----------TEIQEVIKQQIPESVIMTVTRRMMLRITDELRRKRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+             +  P++ + K E  ++AQ I
Sbjct: 281 GLAIVNGESLGQVASQTLESMLAINAVTAT---------PIIRPVVAMDKNEIIQIAQKI 331

Query: 188 GGQDLVNLILEE 199
              +L     E+
Sbjct: 332 DTYNLSVQPFED 343


>gi|291563949|emb|CBL42765.1| thiazole biosynthesis/tRNA modification protein ThiI
           [butyrate-producing bacterium SS3/4]
          Length = 407

 Score = 88.0 bits (216), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 57/190 (30%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+LL SGG DS         R   ++   F                ++K+V+L      
Sbjct: 196 RAMLLLSGGIDSPVAGWMIAKRGVTIDATYFH------APPYTSERAKQKVVDLAKLVAK 249

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G   +  +             ++ + I D    +          +  A T+A      
Sbjct: 250 YTGPIRLNIINF----------TDIQLYIYDQCPHDELTIIMRRYMMKIAETIAKENDCL 299

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      +          + +++         + V  PL+   K +   ++  IG 
Sbjct: 300 ALVTGESIGQVAS---------QTMQSLAVTNEVCELPVMRPLIAFDKQDIVDISLKIGT 350

Query: 190 QDLVNLILEE 199
            +   L  E+
Sbjct: 351 YETSVLPYED 360


>gi|296449547|ref|ZP_06891324.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           difficile NAP08]
 gi|296878130|ref|ZP_06902145.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           difficile NAP07]
 gi|296261611|gb|EFH08429.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           difficile NAP08]
 gi|296430883|gb|EFH16715.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           difficile NAP07]
          Length = 391

 Score = 88.0 bits (216), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 56/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+ L SGG DS         R   VE + F                ++K+ +L    
Sbjct: 179 NGRAMSLLSGGIDSPVATWMVAKRGMEVEAVHFH------SYPFTSERSQEKVKDLAKIL 232

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  + IL           +   I +N              +  A  L+ +  
Sbjct: 233 AKYCGRVRLHKVNIL----------EIQKAIGENCNEEEATILSRRFMMRIAQRLSEKRH 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +           A+           + V  PL+ + K +   +A+ I
Sbjct: 283 CDALITGESIGQVASQTIQGLTCTNAV---------VDLPVFRPLIAMDKSDIVDIAKKI 333

Query: 188 GGQDLVNLILEE 199
           G  +   +  E+
Sbjct: 334 GTFETSIVPEED 345


>gi|167749693|ref|ZP_02421820.1| hypothetical protein EUBSIR_00651 [Eubacterium siraeum DSM 15702]
 gi|167657316|gb|EDS01446.1| hypothetical protein EUBSIR_00651 [Eubacterium siraeum DSM 15702]
 gi|291529825|emb|CBK95410.1| thiazole biosynthesis/tRNA modification protein ThiI [Eubacterium
           siraeum 70/3]
 gi|291556460|emb|CBL33577.1| thiazole biosynthesis/tRNA modification protein ThiI [Eubacterium
           siraeum V10Sc8a]
          Length = 396

 Score = 88.0 bits (216), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  ALLL SGG DS         R   V+ + F                  K+  L  K 
Sbjct: 177 SGKALLLLSGGIDSPVAGYMMAKRGLIVDGIHF------VSPPYTSERALMKVETLCEKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+     +              +   ++DN     F      + +  A  +A R  
Sbjct: 231 TSYCGDIRFYCVPF----------TEIQEALRDNCPEEFFTIIMRRLMVKIANIIAERNE 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +           A              V  P++ + K E   +A+ I
Sbjct: 281 YGALVTGESVGQVASQTLKAIQCTDAAAEY---------PVFRPVIGMDKKEIIDIARKI 331

Query: 188 GGQDLVNLILEE 199
              +   L  E+
Sbjct: 332 DTFETSTLPYED 343


>gi|313638006|gb|EFS03295.1| thiamine biosynthesis/tRNA modification protein ThiI [Listeria
           seeligeri FSL S4-171]
          Length = 403

 Score = 88.0 bits (216), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 58/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A  R   +E + F                ++K ++L  K 
Sbjct: 177 SGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHFH------SPPYTSEQAKQKAIDLAAKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  +              +   I+     +  +     + L     L  +  
Sbjct: 231 AKYSGQVQMHIVPF----------TEIQEVIKQQIPESVIMTVTRRMMLRITDELRRKRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+             +  P++ + K E   +AQ I
Sbjct: 281 GLAIVNGESLGQVASQTLESMLAINAVTAT---------PIIRPVVSMDKNEIITIAQKI 331

Query: 188 GGQDLVNLILEE 199
              +L     E+
Sbjct: 332 DTYNLSVQPFED 343


>gi|313633061|gb|EFR99972.1| thiamine biosynthesis/tRNA modification protein ThiI [Listeria
           seeligeri FSL N1-067]
          Length = 403

 Score = 88.0 bits (216), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 58/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A  R   +E + F                ++K ++L  K 
Sbjct: 177 SGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHFH------SPPYTSEQAKQKAIDLAAKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  +              +   I+     +  +     + L     L  +  
Sbjct: 231 AKYSGQVQMHIVPF----------TEIQEVIKQQIPESVIMTVTRRMMLRITDELRRKRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+             +  P++ + K E   +AQ I
Sbjct: 281 GLAIVNGESLGQVASQTLESMLAINAVTAT---------PIIRPVVSMDKNEIITIAQKI 331

Query: 188 GGQDLVNLILEE 199
              +L     E+
Sbjct: 332 DTYNLSVQPFED 343


>gi|289434873|ref|YP_003464745.1| thiamine biosynthesis protein ThiI [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
 gi|289171117|emb|CBH27659.1| thiamine biosynthesis protein ThiI [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
          Length = 403

 Score = 88.0 bits (216), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 58/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A  R   +E + F                ++K ++L  K 
Sbjct: 177 SGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHFH------SPPYTSEQAKQKAIDLAAKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  +              +   I+     +  +     + L     L  +  
Sbjct: 231 AKYSGQVQMHIVPF----------TEIQEVIKQQIPESVIMTVTRRMMLRITDELRRKRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+             +  P++ + K E   +AQ I
Sbjct: 281 GLAIVNGESLGQVASQTLESMLAINAVTAT---------PIIRPVVSMDKNEIITIAQKI 331

Query: 188 GGQDLVNLILEE 199
              +L     E+
Sbjct: 332 DTYNLSVQPFED 343


>gi|260682451|ref|YP_003213736.1| thiamine biosynthesis protein ThiI [Clostridium difficile CD196]
 gi|260686050|ref|YP_003217183.1| thiamine biosynthesis protein ThiI [Clostridium difficile R20291]
 gi|260208614|emb|CBA61338.1| putative thiamine biosynthesis protein [Clostridium difficile
           CD196]
 gi|260212066|emb|CBE02652.1| putative thiamine biosynthesis protein [Clostridium difficile
           R20291]
          Length = 391

 Score = 88.0 bits (216), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 56/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+ L SGG DS         R   VE + F                ++K+ +L    
Sbjct: 179 NGRAMSLLSGGIDSPVATWMVAKRGMEVEAVHFH------SYPFTSERSQEKVKDLAKIL 232

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  + IL           +   I +N              +  A  L+ +  
Sbjct: 233 AKYCGRVRLHKVNIL----------EIQKAIGENCNEEEATILSRRFMMRIAQRLSEKRH 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +           A+           + V  PL+ + K +   +A+ I
Sbjct: 283 CDALITGESIGQVASQTIQGLTCTNAV---------VDLPVFRPLIAMDKSDIVDIAKKI 333

Query: 188 GGQDLVNLILEE 199
           G  +   +  E+
Sbjct: 334 GTFETSIVPEED 345


>gi|332982256|ref|YP_004463697.1| thiamine biosynthesis/tRNA modification protein ThiI [Mahella
           australiensis 50-1 BON]
 gi|332699934|gb|AEE96875.1| thiamine biosynthesis/tRNA modification protein ThiI [Mahella
           australiensis 50-1 BON]
          Length = 390

 Score = 88.0 bits (216), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 52/190 (27%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+LL SGG DS         R   +  + +                R K+ ++      
Sbjct: 180 KAMLLISGGIDSPVAGYMIAKRGVELSAVHYY------SFPYTSQRARDKVEDICRILSA 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G   I  +             ++   I +    N          +  A  LA + G  
Sbjct: 234 YTGPIKIHMVPF----------TDIQQAIYERCPDNQLTILTRRFMMRIAQKLARQNGCK 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +           A            + V  PL+   K E    A+ IG 
Sbjct: 284 AIVTGESIGQVASQTIDSLAVTEAA---------VDMLVLRPLIAFDKVEIMDAAKKIGT 334

Query: 190 QDLVNLILEE 199
            +   L  E+
Sbjct: 335 YETSILPYED 344


>gi|291166326|gb|EFE28372.1| thiamine biosynthesis/tRNA modification protein ThiI [Filifactor
           alocis ATCC 35896]
          Length = 395

 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 59/190 (31%), Gaps = 24/190 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DS         R  ++E + F                ++KI +L  +   
Sbjct: 181 KAMVLLSGGIDSPVASYLIAKRGLQIEAVHFH------SFPFTSERSKEKIEQLAKQLSL 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 I  + +L           +  KI +               +  A  +A      
Sbjct: 235 YTEGIRIHMVNLL----------PIQTKIAEKCPEELMTILSRRFMMRIAEKIALDRNCG 284

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      +        +  A+           + V  PL+   K +  ++A+ IG 
Sbjct: 285 GLVTGESIGQVASQTVEGLQSTNAVVKT--------IPVFRPLISFDKEDIIEVAKKIGT 336

Query: 190 QDLVNLILEE 199
            D+  +  E+
Sbjct: 337 FDISIIPEED 346


>gi|262282604|ref|ZP_06060372.1| thiamine biosynthesis protein ThiI [Streptococcus sp. 2_1_36FAA]
 gi|262261895|gb|EEY80593.1| thiamine biosynthesis protein ThiI [Streptococcus sp. 2_1_36FAA]
          Length = 404

 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +    G
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREERG 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+             V  P++ + K E  ++A+ I
Sbjct: 281 AQVIVNGESLGQVASQTIESMQAINAVTNT---------PVIRPVVTMDKLEIIEIAEKI 331

Query: 188 GGQDLVNLILEE 199
               +     E+
Sbjct: 332 DTFQISIQPFED 343


>gi|257869992|ref|ZP_05649645.1| thiamine biosynthesis protein [Enterococcus gallinarum EG2]
 gi|257804156|gb|EEV32978.1| thiamine biosynthesis protein [Enterococcus gallinarum EG2]
          Length = 399

 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 63/192 (32%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS     +A+ R   +E + F                 +K  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYFAMKRGVEIEAVHF------ASPPYTSEQALQKAKDLTKKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +G    + +              V  +I+ +     ++     + L     +     
Sbjct: 231 TPYVGGIQFIEVPF----------TEVQEEIKKHVPQGYWMTITRRMMLRLTDAIREARH 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +          + +++ + +   ++  +  P+  + K E   +AQ+I
Sbjct: 281 GLIILNGESLGQVAS---------QTLQSMVAINEVTNTPIIRPVATMDKLEIIDVAQEI 331

Query: 188 GGQDLVNLILEE 199
              +L     E+
Sbjct: 332 DTFELAIQPFED 343


>gi|254974372|ref|ZP_05270844.1| thiamine biosynthesis protein ThiI [Clostridium difficile
           QCD-66c26]
 gi|255091766|ref|ZP_05321244.1| thiamine biosynthesis protein ThiI [Clostridium difficile CIP
           107932]
 gi|255099870|ref|ZP_05328847.1| thiamine biosynthesis protein ThiI [Clostridium difficile
           QCD-63q42]
 gi|255305758|ref|ZP_05349930.1| thiamine biosynthesis protein ThiI [Clostridium difficile ATCC
           43255]
 gi|255313496|ref|ZP_05355079.1| thiamine biosynthesis protein ThiI [Clostridium difficile
           QCD-76w55]
 gi|255516184|ref|ZP_05383860.1| thiamine biosynthesis protein ThiI [Clostridium difficile
           QCD-97b34]
 gi|255649280|ref|ZP_05396182.1| thiamine biosynthesis protein ThiI [Clostridium difficile
           QCD-37x79]
 gi|306519380|ref|ZP_07405727.1| thiamine biosynthesis protein ThiI [Clostridium difficile
           QCD-32g58]
          Length = 390

 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 56/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+ L SGG DS         R   VE + F                ++K+ +L    
Sbjct: 178 NGRAMSLLSGGIDSPVATWMVAKRGMEVEAVHFH------SYPFTSERSQEKVKDLAKIL 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  + IL           +   I +N              +  A  L+ +  
Sbjct: 232 AKYCGRVRLHKVNIL----------EIQKAIGENCNEEEATILSRRFMMRIAQRLSEKRH 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +           A+           + V  PL+ + K +   +A+ I
Sbjct: 282 CDALITGESIGQVASQTIQGLTCTNAV---------VDLPVFRPLIAMDKSDIVDIAKKI 332

Query: 188 GGQDLVNLILEE 199
           G  +   +  E+
Sbjct: 333 GTFETSIVPEED 344


>gi|311069444|ref|YP_003974367.1| thiamine biosynthesis protein ThiI [Bacillus atrophaeus 1942]
 gi|310869961|gb|ADP33436.1| thiamine biosynthesis protein ThiI [Bacillus atrophaeus 1942]
          Length = 401

 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 61/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+L+ SGG DS     +A+ R   VE + F                ++K+++L      
Sbjct: 179 KAMLMLSGGFDSPVAGFYAMKRGLSVEAVHFF------SPPYTSERAKQKVIDLAGGLSK 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+  +  +                  IQ     N  +     + L  A  +  +    
Sbjct: 233 FGGKMTLHIVPF----------TKTQELIQKQIPENYTMTATRRLMLQIADRIREQRKGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++ G      +         I A+ +           +  PL+ + K E  + +++IG 
Sbjct: 283 ALITGESLGQVASQTLESMYAINAVTST---------PILRPLIGMDKTEIIEKSREIGT 333

Query: 190 QDLVNLILEE 199
            D      E+
Sbjct: 334 YDTSIQPFED 343


>gi|157151681|ref|YP_001450114.1| thiamine biosynthesis protein ThiI [Streptococcus gordonii str.
           Challis substr. CH1]
 gi|189030661|sp|A8AWF4|THII_STRGC RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|157076475|gb|ABV11158.1| thiamine biosynthesis protein ThiI [Streptococcus gordonii str.
           Challis substr. CH1]
          Length = 404

 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 55/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +             ++  +I+        +       +     +    G
Sbjct: 231 TKFGGNIQFIEVPF----------TDIQEEIKAKAPEAYLMTLTRRFMMRITDRIREERG 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             V  P++ + K E  ++A+ I
Sbjct: 281 AQVIINGESLGQVASQTIESMQAINAVTNT---------PVIRPVVTMDKLEIIEIAEKI 331

Query: 188 GGQDLVNLILEE 199
               +     E+
Sbjct: 332 DTFQISIQPFED 343


>gi|315658023|ref|ZP_07910896.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus lugdunensis M23590]
 gi|315496913|gb|EFU85235.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus lugdunensis M23590]
          Length = 407

 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 61/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                ++K++EL      
Sbjct: 179 KTLLMLSGGIDSPVAGIEVMRRGVTIEAIHFH------SPPFTSEKAKEKVIELTRIMSQ 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +             N+  +I     P   +     + +  A  + + +G  
Sbjct: 233 RVGPIKLHIVPF----------TNLQKQINKVVHPRYTMTSMRRMMMRIADKVVHEIGAH 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +                  +   +   V  PL+ L K E  K+A+ IG 
Sbjct: 283 AIVNGENLGQVASQTLKSMY---------AINHVTSTPVLRPLLTLDKEEIVKMARKIGT 333

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 334 YDVSIQPFED 343


>gi|55822387|ref|YP_140828.1| thiamine biosynthesis protein ThiI [Streptococcus thermophilus
           CNRZ1066]
 gi|55738372|gb|AAV62013.1| thiamine biosynthesis protein [Streptococcus thermophilus CNRZ1066]
          Length = 407

 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 56/190 (29%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +L+ SGG DS      AL R   +E + F                 KK  +L  K   
Sbjct: 181 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKLTK 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G  H + +           T+      +           R  +  +       R G+ 
Sbjct: 235 FGGNIHFIEVPF---------TEIQEEIKEKAPEAYLMTLTRRFMMRITDRIREERCGLV 285

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I         S          + +E+   +   +   V  P++ + K E   LAQ I  
Sbjct: 286 IINGESLGQVAS----------QTMESMQAINAVTCTPVIRPVVTMDKLEIIDLAQKIDT 335

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 336 FDISIQPFED 345


>gi|227510167|ref|ZP_03940216.1| thiamine-phosphate kinase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227190372|gb|EEI70439.1| thiamine-phosphate kinase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 405

 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A ++ SGG DS      A+ R  +++ + F                  K  +L      
Sbjct: 179 RATMMLSGGIDSPVATYLAMKRGVKIDMIHFY------SPPYTSEQALNKAKQLTSILAK 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G    + +              V   I++       +  +  + L  AA +       
Sbjct: 233 YSGNIQFIQVPF----------TEVQETIKEKVPEGYLMTIQRRMMLRIAAEITKSRHCG 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +  G      +          + +E+ + +   + + V  PL+ + K E  K+++ IG 
Sbjct: 283 GVFTGESLGQVAS---------QTLESMLAINDVTSMPVLRPLVSMDKTEIIKISKQIGT 333

Query: 190 QDLVNLILEE 199
            DL  L  E+
Sbjct: 334 YDLSILPYED 343


>gi|227524310|ref|ZP_03954359.1| thiamine-phosphate kinase [Lactobacillus hilgardii ATCC 8290]
 gi|227088541|gb|EEI23853.1| thiamine-phosphate kinase [Lactobacillus hilgardii ATCC 8290]
          Length = 405

 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A ++ SGG DS      A+ R  +++ + F                  K  +L      
Sbjct: 179 RATMMLSGGIDSPVATYLAMKRGVKIDMIHFY------SPPYTSEQALNKAKQLTSILAK 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G    + +              V   I++       +  +  + L  AA +       
Sbjct: 233 YSGNIQFIQVPF----------TEVQETIKEKVPEGYLMTIQRRMMLRIAAEITKSRHCG 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +  G      +          + +E+ + +   + + V  PL+ + K E  K+++ IG 
Sbjct: 283 GVFTGESLGQVAS---------QTLESMLAINDVTSMPVLRPLVSMDKTEIIKISKQIGT 333

Query: 190 QDLVNLILEE 199
            DL  L  E+
Sbjct: 334 YDLSILPYED 343


>gi|227513095|ref|ZP_03943144.1| thiamine-phosphate kinase [Lactobacillus buchneri ATCC 11577]
 gi|227083670|gb|EEI18982.1| thiamine-phosphate kinase [Lactobacillus buchneri ATCC 11577]
          Length = 405

 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A ++ SGG DS      A+ R  +++ + F                  K  +L      
Sbjct: 179 RATMMLSGGIDSPVATYLAMKRGVKIDMIHFY------SPPYTSEQALNKAKQLTSILAK 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G    + +              V   I++       +  +  + L  AA +       
Sbjct: 233 YSGNIQFIQVPF----------TEVQETIKEKVPEGYLMTIQRRMMLRIAAEITKSRHCG 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +  G      +          + +E+ + +   + + V  PL+ + K E  K+++ IG 
Sbjct: 283 GVFTGESLGQVAS---------QTLESMLAINDVTSMPVLRPLVSMDKTEIIKISKQIGT 333

Query: 190 QDLVNLILEE 199
            DL  L  E+
Sbjct: 334 YDLSILPYED 343


>gi|225574858|ref|ZP_03783468.1| hypothetical protein RUMHYD_02936 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037932|gb|EEG48178.1| hypothetical protein RUMHYD_02936 [Blautia hydrogenotrophica DSM
           10507]
          Length = 396

 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 57/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               +LL SGG DS         R  +++ + F                ++K+V+L    
Sbjct: 183 NGKGMLLLSGGIDSPVAGYMIAKRGVQIDAVYFH------APPYTSERAKQKVVDLARLV 236

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G  ++  +             ++ + I D               +  A   A    
Sbjct: 237 ARYSGPINLHVVNF----------TDIQLYIYDQCPHEELTIIMRRYMMRIAEHFARERK 286

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +          + +++ +       + V+ P++   K E  ++A  I
Sbjct: 287 CMGLITGESIGQVAS---------QTMQSLMATNEVCTLPVYRPVIGFDKQEIVEIAHKI 337

Query: 188 GGQDLVNLILEE 199
              +      E+
Sbjct: 338 DTFETSIQPFED 349


>gi|255514114|gb|EET90377.1| thiamine biosynthesis protein [Candidatus Micrarchaeum acidiphilum
           ARMAN-2]
          Length = 395

 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 60/193 (31%), Gaps = 28/193 (14%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPK 66
           +  A++L SGG DS     +A+ R   V  L    Y   +         +  ++ +   K
Sbjct: 175 SGRAVVLLSGGIDSPVAAFYAMRRGFDVVYLHIHGYDDPHTAMASKMHELVGQLAKYSGK 234

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +      HI  +A +G                        +  R I  L     +A  +
Sbjct: 235 TRVYYAPFHIFQMAAMGSA----------------PRYELVLFKRFIYLLS--EKMADEM 276

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  IV G      +        + ++              +  PL+   K E  ++A+ 
Sbjct: 277 NIDAIVTGESLGQVASQTVSNLGSAQS---------GVRHLIFRPLIGFDKNEIIEMARR 327

Query: 187 IGGQDLVNLILEE 199
           IG  D+      +
Sbjct: 328 IGTYDISIKPYRD 340


>gi|242399698|ref|YP_002995123.1| Putative thiamine biosynthesis protein THII [Thermococcus sibiricus
           MM 739]
 gi|242266092|gb|ACS90774.1| Putative thiamine biosynthesis protein THII [Thermococcus sibiricus
           MM 739]
          Length = 366

 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 60/189 (31%), Gaps = 25/189 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L SGG DS       L R   V  + FD G       +    V +K+VE++  +  
Sbjct: 170 KVVALLSGGIDSPVAAFLMLKRGAEVIAVHFDQG-------KNARKVVEKVVEILSDYSP 222

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E  +         +H  + K   + +   N          +  L  AA +A   G  
Sbjct: 223 EPIELIV--------ENHFEVLKPYVITLNKLNRREWTCVVCKVAMLRRAAEVAKENGAL 274

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + +       +     VH PL+   K E   +A+ I  
Sbjct: 275 GIVTGDSLGQVAS---------QTLTNLYFETITVDFPVHRPLLGFDKEEIVSIARKIKT 325

Query: 190 QD-LVNLIL 197
            D  +    
Sbjct: 326 YDAFLEYPY 334


>gi|166031239|ref|ZP_02234068.1| hypothetical protein DORFOR_00926 [Dorea formicigenerans ATCC
           27755]
 gi|166029086|gb|EDR47843.1| hypothetical protein DORFOR_00926 [Dorea formicigenerans ATCC
           27755]
          Length = 393

 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             +A+LL SGG DS         R   +E   F                ++K+V+L    
Sbjct: 180 NGNAMLLLSGGIDSPVAGYMVSKRGVGLEATYFH------APPYTSERAKQKVVDLAKIV 233

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +             ++ + I D    +          +  A   A R G
Sbjct: 234 ARYSGPIKLHVVNF----------TDIQLYIYDKCPHDELTIIMRRYMMRIAEEFARRDG 283

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +          + +++         + V+ PL+   K +   +A+ I
Sbjct: 284 CLGLVTGESIGQVAS---------QTMQSLAATNDVCTMPVYRPLIGFDKQDIVDVAEKI 334

Query: 188 GGQDLVNLILEE 199
              +   L  E+
Sbjct: 335 DTYETSILPFED 346


>gi|332360317|gb|EGJ38129.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK49]
          Length = 404

 Score = 88.0 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 53/192 (27%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +    G
Sbjct: 231 TKFGGNIKFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREERG 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             V  P++ + K E   +A+ I
Sbjct: 281 AQVIINGESLGQVASQTIESMQAINAVTNT---------PVIRPVVTMDKLEIIDIAEKI 331

Query: 188 GGQDLVNLILEE 199
               +     E+
Sbjct: 332 DTFQISIQPFED 343


>gi|256847987|ref|ZP_05553431.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           coleohominis 101-4-CHN]
 gi|256715047|gb|EEU30024.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           coleohominis 101-4-CHN]
          Length = 406

 Score = 87.7 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 60/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +++ SGG DS      AL R   +E + F                  K  EL  K   
Sbjct: 180 KGMMMLSGGIDSPVAAYLALKRGVSLEMVHFY------SPPYTSEQALAKAKELTGKLAH 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G  + + +              +   +++       +  +  + L  A  +A R    
Sbjct: 234 YCGSINFIEVPF----------TEIQETVKEKVPEGYLMTIQRRLMLRLAVEIANRRKGL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +  G      +        TI  +           + V  P++   K E  K+A++IG 
Sbjct: 284 AVFNGESLGQVASQTMESMRTIEEVTN---------LPVLRPVLSYDKTEIIKIAEEIGT 334

Query: 190 QDLVNLILEE 199
            DL  L  E+
Sbjct: 335 YDLSILPYED 344


>gi|309775683|ref|ZP_07670682.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916589|gb|EFP62330.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Erysipelotrichaceae bacterium 3_1_53]
          Length = 402

 Score = 87.7 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 58/190 (30%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS       + R   +E + +                + K++EL  +   
Sbjct: 183 KAMVMLSGGIDSPVASYLTMKRGVAIECVHY------ASPPYTSQAAQDKVLELARQIAP 236

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G   +  +             +V + I  N   +  +     +    A  L  +    
Sbjct: 237 YQGHIRVHVVPF----------TDVQLAIYKNCDESYAITIMRRMMYRIAQRLCEQQHCL 286

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +                  +   + + V  P+  + K E   +A++I  
Sbjct: 287 AIVNGESIGQVASQTLESMQ---------TINCVTTLPVIRPVACMDKVEIIDVARNIDT 337

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 338 YDISIQPFED 347


>gi|239637966|ref|ZP_04678927.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus warneri L37603]
 gi|239596529|gb|EEQ79065.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus warneri L37603]
          Length = 407

 Score = 87.7 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 67/190 (35%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                ++K++EL     +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMKRGVTIEAIHFH------SPPFTSEKAKEKVIELTRIMSE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +             ++  +I  +  P   +     + +  A  L +++G  
Sbjct: 233 RVGPIKLHIVPF----------TDLQKQINKSVHPRYTMTSTRRLMMRVADQLVHKIGAL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + + +   +   +   V  PL+ L K +  K A++IG 
Sbjct: 283 GIVNGENLGQVAS---------QTLNSMYAINHVTSTPVLRPLLTLDKEDIVKKAKEIGT 333

Query: 190 QDLVNLILEE 199
            ++     E+
Sbjct: 334 FEVSIQPYED 343


>gi|325262828|ref|ZP_08129564.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           sp. D5]
 gi|324031922|gb|EGB93201.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           sp. D5]
          Length = 404

 Score = 87.7 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             +A+LL SGG DS         R   +    F                ++K+++L    
Sbjct: 191 NGNAMLLLSGGIDSPVAGYMISKRGVGLHATYFH------APPYTSERAKEKVIDLARLV 244

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +             ++ + I +               +  A   A   G
Sbjct: 245 SRYAGPVQLHVVNF----------TDIQLYIYEKCPHEELTIIMRRYMMKIAEHFAKENG 294

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +           A+           + V+ PL+   K E  ++A+ I
Sbjct: 295 CLGLITGESIGQVASQTMQSLAATNAV---------CTLPVYRPLIGFDKREIVEIAEKI 345

Query: 188 GGQDLVNLILEE 199
              +      E+
Sbjct: 346 DTYETSIQPFED 357


>gi|327473924|gb|EGF19337.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK408]
          Length = 404

 Score = 87.7 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 55/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+     +  +       +     +    G
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPESYLMTLTRRFMMRITDRIREERG 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             V  P++ + K E  ++A+ I
Sbjct: 281 AQVIINGESLGQVASQTIESMQAINAVTNT---------PVIRPVVTMDKLEIIEIAEKI 331

Query: 188 GGQDLVNLILEE 199
               +     E+
Sbjct: 332 DTFQISIQPFED 343


>gi|321312495|ref|YP_004204782.1| thiamine biosynthesis protein ThiI [Bacillus subtilis BSn5]
 gi|320018769|gb|ADV93755.1| thiamine biosynthesis protein ThiI [Bacillus subtilis BSn5]
          Length = 401

 Score = 87.7 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 60/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+L+ SGG DS     +A+ R   VE + F                ++K+++L      
Sbjct: 179 KAMLMLSGGFDSPVAGFYAMKRGLSVEAVHFF------SPPYTSERAKQKVMDLAKCLSR 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G   +  +                  IQ     N  +     + L  A  +  +    
Sbjct: 233 FGGSMTLHIVPF----------TKTQELIQKQIPENYTMTATRRLMLQIADRIREKRNGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I+ G      +         I A+ +           +  PL+ + K E  + +++IG 
Sbjct: 283 AIITGESLGQVASQTLESMYAINAVTST---------PILRPLIAMDKTEIIEKSREIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 YETSIQPFED 343


>gi|296332065|ref|ZP_06874529.1| thiamine biosynthesis protein ThiI [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305675540|ref|YP_003867212.1| persulfide ATP pyrophosphatase involved in thiamine biosynthesis
           and tRNA modification [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296150836|gb|EFG91721.1| thiamine biosynthesis protein ThiI [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305413784|gb|ADM38903.1| persulfide ATP pyrophosphatase involved in thiamine biosynthesis
           and tRNA modification [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 401

 Score = 87.7 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 60/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+L+ SGG DS     +A+ R   VE + F                ++K+++L      
Sbjct: 179 KAMLMLSGGFDSPVAGFYAMKRGLSVEAVHFF------SPPYTSERAKQKVMDLAKCLSR 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G   +  +                  IQ     N  +     + L  A  +  +    
Sbjct: 233 FGGSMTLHIVPF----------TKTQELIQKQIPENYTMTATRRLMLQIADRIREKRNGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I+ G      +         I A+ +           +  PL+ + K E  + +++IG 
Sbjct: 283 AIITGESLGQVASQTLESMYAINAVTST---------PILRPLIAMDKTEIIEKSREIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 YETSIQPFED 343


>gi|255767679|ref|NP_390836.2| thiamine biosynthesis protein ThiI [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|251757346|sp|O34595|THII_BACSU RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|225185307|emb|CAB14936.2| persulfide ATP pyrophosphatase involved in thiamine biosynthesis
           and tRNA modification [Bacillus subtilis subsp. subtilis
           str. 168]
          Length = 401

 Score = 87.7 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 60/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+L+ SGG DS     +A+ R   VE + F                ++K+++L      
Sbjct: 179 KAMLMLSGGFDSPVAGFYAMKRGLSVEAVHFF------SPPYTSERAKQKVMDLAKCLSR 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G   +  +                  IQ     N  +     + L  A  +  +    
Sbjct: 233 FGGSMTLHIVPF----------TKTQELIQKQIPENYTMTATRRLMLQIADRIREKRNGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I+ G      +         I A+ +           +  PL+ + K E  + +++IG 
Sbjct: 283 AIITGESLGQVASQTLESMYAINAVTST---------PILRPLIAMDKTEIIEKSREIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 YETSIQPFED 343


>gi|221315228|ref|ZP_03597033.1| thiamine biosynthesis protein ThiI [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
          Length = 379

 Score = 87.7 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 60/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+L+ SGG DS     +A+ R   VE + F                ++K+++L      
Sbjct: 179 KAMLMLSGGFDSPVAGFYAMKRGLSVEAVHFF------SPPYTSERAKQKVMDLAKCLSR 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G   +  +                  IQ     N  +     + L  A  +  +    
Sbjct: 233 FGGSMTLHIVPF----------TKTQELIQKQIPENYTMTATRRLMLQIADRIREKRNGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I+ G      +         I A+ +           +  PL+ + K E  + +++IG 
Sbjct: 283 AIITGESLGQVASQTLESMYAINAVTST---------PILRPLIAMDKTEIIEKSREIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 YETSIQPFED 343


>gi|221310902|ref|ZP_03592749.1| thiamine biosynthesis protein ThiI [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221320146|ref|ZP_03601440.1| thiamine biosynthesis protein ThiI [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221324427|ref|ZP_03605721.1| thiamine biosynthesis protein ThiI [Bacillus subtilis subsp.
           subtilis str. SMY]
          Length = 379

 Score = 87.7 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 60/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+L+ SGG DS     +A+ R   VE + F                ++K+++L      
Sbjct: 179 KAMLMLSGGFDSPVAGFYAMKRGLSVEAVHFF------SPPYTSERAKQKVMDLAKCLSR 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G   +  +                  IQ     N  +     + L  A  +  +    
Sbjct: 233 FGGSMTLHIVPF----------TKTQELIQKQIPENYTMTATRRLMLQIADRIREKRNGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I+ G      +         I A+ +           +  PL+ + K E  + +++IG 
Sbjct: 283 AIITGESLGQVASQTLESMYAINAVTST---------PILRPLIAMDKTEIIEKSREIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 YETSIQPFED 343


>gi|2293230|gb|AAC00308.1| YtbJ [Bacillus subtilis]
          Length = 358

 Score = 87.7 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 60/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+L+ SGG DS     +A+ R   VE + F                ++K+++L      
Sbjct: 179 KAMLMLSGGFDSPVAGFYAMKRGLSVEAVHFF------SPPYTSERAKQKVMDLAKCLSR 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G   +  +                  IQ     N  +     + L  A  +  +    
Sbjct: 233 FGGSMTLHIVPF----------TKTQELIQKQIPENYTMTATRRLMLQIADRIREKRNGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I+ G      +         I A+ +           +  PL+ + K E  + +++IG 
Sbjct: 283 AIITGESLGQVASQTLESMYAINAVTST---------PILRPLIAMDKTEIIEKSREIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 YETSIQPFED 343


>gi|212224157|ref|YP_002307393.1| thiamine biosynthesis protein ThiI [Thermococcus onnurineus NA1]
 gi|212009114|gb|ACJ16496.1| Thiamine biosynthesis protein ThiI [Thermococcus onnurineus NA1]
          Length = 383

 Score = 87.7 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 66/187 (35%), Gaps = 24/187 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L SGG DS       + R   V  +    G++        L   +KI   + K+  
Sbjct: 184 KVVALLSGGIDSPVAAFLMMKRGVEVIPVHIYMGEKT-------LEKVRKIWNQLRKYGY 236

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
               + I+              + +  K+++    N        + +  A  +A   G  
Sbjct: 237 GGKGELIVVKPK--------ERERILQKLKELKKENYTCVFCKFMMVRHADRIAKDFGAK 288

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV+G      +          + +E    +   S + ++ PL+ + K E  K+A++IG 
Sbjct: 289 GIVMGDSLGQVAS---------QTLENMYIVSRASDLPIYRPLIGMDKEEIVKIAKEIGT 339

Query: 190 QDLVNLI 196
            +L  L 
Sbjct: 340 FELSTLP 346


>gi|89100084|ref|ZP_01172953.1| hypothetical protein B14911_23725 [Bacillus sp. NRRL B-14911]
 gi|89085174|gb|EAR64306.1| hypothetical protein B14911_23725 [Bacillus sp. NRRL B-14911]
          Length = 401

 Score = 87.7 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+L+ SGG DS      ++ R   VE + F                ++K+++L  K   
Sbjct: 179 KAMLMLSGGIDSPVAGYLSMKRGLDVEAVHFY------SPPFTSERSKQKVIDLAEKLAG 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+  +  +              +   IQ     N  +     + L     +  + G  
Sbjct: 233 YTGQMVLHIVPF----------TEIQQLIQKQVPENYTMTTTRRLMLKITDLVREKHGGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++ G      +                  +   +   V  PL+ + K +  ++AQ+I  
Sbjct: 283 AVITGESLGQVASQTLDSMY---------AINEVTSTPVLRPLITMDKTDIIEIAQEIDT 333

Query: 190 QDLVNLILEE 199
            D+  L  ++
Sbjct: 334 HDISILPYDD 343


>gi|162454373|ref|YP_001616740.1| hypothetical protein sce6096 [Sorangium cellulosum 'So ce 56']
 gi|161164955|emb|CAN96260.1| hypothetical protein sce6096 [Sorangium cellulosum 'So ce 56']
          Length = 435

 Score = 87.7 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 76/240 (31%), Gaps = 31/240 (12%)

Query: 11  ALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           A+ LFSGG DS       L+  R  RV  +   Y   +    +           L  +  
Sbjct: 117 AVCLFSGGVDSLIGAINLLESDRKSRVVLVGH-YDSTHTPGTQK---------VLADELI 166

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG- 127
              G++ +LPL +L      +  ++         +  +    R+++FL     +A  LG 
Sbjct: 167 QEYGDERVLPLRVL---VRPAPIRDGVQAYPLPAVKESTTRSRSLVFLGLGMAVAAALGP 223

Query: 128 -----------ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
                      I   V        S      H             +     +  P ++  
Sbjct: 224 AVPLYIPENGFIAINVPLHGSRVGSCSTRTTHPYFLDRIANALGVVGVKNPIVNPYVYKT 283

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG-CNSCPACYLRQKGWMEFK 235
           K E  +  +    QDL+  +   + +C   +R +     +  C  C  C +R+  +    
Sbjct: 284 KGEMVRECK---NQDLLRRVAHITVSCAHPERKQNETNTWPNCGYCYPCLIRRAAFNWAG 340


>gi|291549890|emb|CBL26152.1| thiazole biosynthesis/tRNA modification protein ThiI [Ruminococcus
           torques L2-14]
          Length = 396

 Score = 87.7 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 57/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             SA+LL SGG DS         R   +E   F                ++K+V+L    
Sbjct: 180 NGSAMLLLSGGIDSPVAGYMVSKRGVELEATYFH------APPYTSERAKEKVVDLARLV 233

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +             ++ + I +    +          +  A   A + G
Sbjct: 234 SAYSGPIKLHVVNF----------TDIQLYIYEKCPHDELTIIMRRYMMKIAEHFAKKDG 283

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +           A+           + V+ PL+   K +  ++++ I
Sbjct: 284 CLGLITGESIGQVASQTMQSLAATNAV---------CTLPVYRPLIGFDKKDIVEISEKI 334

Query: 188 GGQDLVNLILEE 199
              +      E+
Sbjct: 335 NTYETSIQPFED 346


>gi|224476804|ref|YP_002634410.1| hypothetical protein Sca_1320 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222421411|emb|CAL28225.1| truncated putative thiamine biosynthesis ATP pyrophosphatase
           (fragment 2) [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 243

 Score = 87.7 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 57/190 (30%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                ++K++EL     +
Sbjct: 15  KTLLMLSGGIDSPVAGMEIMRRGVTIEAIHFH------SPPFTSEKAKEKVIELTRILAE 68

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              V  +I         +     + +  A  + + +G  
Sbjct: 69  HVGPIKLHIVPF----------TEVQKQINKVVYDRYTMTSTRRMMMRIADKVVHNIGAD 118

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +                  +   +   V  PL+ L K +    A++ G 
Sbjct: 119 AIVNGENLGQVASQTLKSMY---------AINHVTTTPVLRPLLTLDKEDIVIKAKEYGT 169

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 170 YETSIQPFED 179


>gi|315230927|ref|YP_004071363.1| thiamine biosynthesis ThiI-like protein [Thermococcus barophilus
           MP]
 gi|315183955|gb|ADT84140.1| thiamine biosynthesis ThiI-like protein [Thermococcus barophilus
           MP]
          Length = 381

 Score = 87.7 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 66/187 (35%), Gaps = 24/187 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   V  +    G++        L   +KI   + K+  
Sbjct: 182 KVVVLLSGGIDSPVAAFLMMKRGCEVVPVHIYMGEKT-------LEKVRKIWNQLKKYHY 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
               D I+              + V  K+++    N        + +  A  +A   G  
Sbjct: 235 GGKSDLIVIKPK--------ERERVLRKLKELGRENYTCIFCKFMMVENADKIAREFGAK 286

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV+G      +          + +E    +   S + ++ PL+ L K E   +A++IG 
Sbjct: 287 GIVMGDSLGQVAS---------QTLENMYIVSQASDLPIYRPLIGLDKEEIVGIAKEIGT 337

Query: 190 QDLVNLI 196
            +L  L 
Sbjct: 338 FELSTLP 344


>gi|332360948|gb|EGJ38753.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK355]
          Length = 404

 Score = 87.3 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +    G
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREERG 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             V  P++ + K E  ++A+ I
Sbjct: 281 AQVIINGESLGQVASQTIESMQAINAVTNT---------PVIRPVVTMDKLEIIEIAEKI 331

Query: 188 GGQDLVNLILEE 199
               +     E+
Sbjct: 332 DTFQISIQPFED 343


>gi|323351681|ref|ZP_08087335.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis VMC66]
 gi|322122167|gb|EFX93893.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis VMC66]
 gi|325687993|gb|EGD30013.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK72]
          Length = 404

 Score = 87.3 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +    G
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREERG 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             V  P++ + K E  ++A+ I
Sbjct: 281 AQVIINGESLGQVASQTIESMQAINAVTNT---------PVIRPVVTMDKLEIIEIAEKI 331

Query: 188 GGQDLVNLILEE 199
               +     E+
Sbjct: 332 DTFQISIQPFED 343


>gi|315160094|gb|EFU04111.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX0312]
          Length = 398

 Score = 87.3 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 59/188 (31%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +L+ SGG DS      A+ R   VE + F                 +K  +L  K    +
Sbjct: 175 MLMLSGGIDSPVAGYLAMKRGVEVEAVHF------ASPPYTSEQALQKAKDLAEKLVPYV 228

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G    + +              +  +I+        +     + L     +        I
Sbjct: 229 GTIQFIEVPF----------TEIQEEIKRVVPQGYLMTITRRLMLRLTDAIREMRKGLVI 278

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           + G      +          + +++ + +   +   +  P++ + K E  ++A+ I   +
Sbjct: 279 INGESLGQVAS---------QTLQSMVAINEVTSTPIIRPVVSMDKTEIIEIAEKIDTFE 329

Query: 192 LVNLILEE 199
           L     E+
Sbjct: 330 LAIQPFED 337


>gi|315145974|gb|EFT89990.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX2141]
          Length = 398

 Score = 87.3 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 59/188 (31%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +L+ SGG DS      A+ R   VE + F                 +K  +L  K    +
Sbjct: 175 MLMLSGGIDSPVAGYLAMKRGVEVEAVHF------ASPPYTSEQALQKAKDLAEKLVPYV 228

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G    + +              +  +I+        +     + L     +        I
Sbjct: 229 GTIQFIEVPF----------TEIQEEIKRVVPQGYLMTITRRLMLRLTDAIREMRKGLVI 278

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           + G      +          + +++ + +   +   +  P++ + K E  ++A+ I   +
Sbjct: 279 INGESLGQVAS---------QTLQSMVAINEVTSTPIIRPVVSMDKTEIIEIAEKIDTFE 329

Query: 192 LVNLILEE 199
           L     E+
Sbjct: 330 LAIQPFED 337


>gi|307290152|ref|ZP_07570071.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX0411]
 gi|306498780|gb|EFM68278.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX0411]
 gi|315148806|gb|EFT92822.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX4244]
 gi|315171829|gb|EFU15846.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX1342]
 gi|315576286|gb|EFU88477.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX0309B]
 gi|315582778|gb|EFU94969.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX0309A]
          Length = 398

 Score = 87.3 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 59/188 (31%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +L+ SGG DS      A+ R   VE + F                 +K  +L  K    +
Sbjct: 175 MLMLSGGIDSPVAGYLAMKRGVEVEAVHF------ASPPYTSEQALQKAKDLAEKLVPYV 228

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G    + +              +  +I+        +     + L     +        I
Sbjct: 229 GTIQFIEVPF----------TEIQEEIKRVVPQGYLMTITRRLMLRLTDAIREMRKGLVI 278

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           + G      +          + +++ + +   +   +  P++ + K E  ++A+ I   +
Sbjct: 279 INGESLGQVAS---------QTLQSMVAINEVTSTPIIRPVVSMDKTEIIEIAEKIDTFE 329

Query: 192 LVNLILEE 199
           L     E+
Sbjct: 330 LAIQPFED 337


>gi|256618282|ref|ZP_05475128.1| thiamine biosynthesis protein [Enterococcus faecalis ATCC 4200]
 gi|256597809|gb|EEU16985.1| thiamine biosynthesis protein [Enterococcus faecalis ATCC 4200]
          Length = 404

 Score = 87.3 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 59/188 (31%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +L+ SGG DS      A+ R   VE + F                 +K  +L  K    +
Sbjct: 181 MLMLSGGIDSPVAGYLAMKRGVEVEAVHF------ASPPYTSEQALQKAKDLAEKLVPYV 234

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G    + +              +  +I+        +     + L     +        I
Sbjct: 235 GTIQFIEVPF----------TEIQEEIKRVVPQGYLMTITRRLMLRLTDAIREMRKGLVI 284

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           + G      +          + +++ + +   +   +  P++ + K E  ++A+ I   +
Sbjct: 285 INGESLGQVAS---------QTLQSMVAINEVTSTPIIRPVVSMDKTEIIEIAEKIDTFE 335

Query: 192 LVNLILEE 199
           L     E+
Sbjct: 336 LAIQPFED 343


>gi|255970837|ref|ZP_05421423.1| thiamine biosynthesis protein [Enterococcus faecalis T1]
 gi|255961855|gb|EET94331.1| thiamine biosynthesis protein [Enterococcus faecalis T1]
          Length = 404

 Score = 87.3 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 59/188 (31%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +L+ SGG DS      A+ R   VE + F                 +K  +L  K    +
Sbjct: 181 MLMLSGGIDSPVAGYLAMKRGVEVEAVHF------ASPPYTSEQALQKAKDLAEKLVPYV 234

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G    + +              +  +I+        +     + L     +        I
Sbjct: 235 GTIQFIEVPF----------TEIQEEIKRVVPQGYLMTITRRLMLRLTDAIREMRKGLVI 284

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           + G      +          + +++ + +   +   +  P++ + K E  ++A+ I   +
Sbjct: 285 INGESLGQVAS---------QTLQSMVAINEVTSTPIIRPVVSMDKTEIIEIAEKIDTFE 335

Query: 192 LVNLILEE 199
           L     E+
Sbjct: 336 LAIQPFED 343


>gi|255974412|ref|ZP_05424998.1| thiamine biosynthesis protein [Enterococcus faecalis T2]
 gi|256761212|ref|ZP_05501792.1| thiamine biosynthesis protein [Enterococcus faecalis T3]
 gi|256852475|ref|ZP_05557851.1| thiazole biosynthesis protein ThiI [Enterococcus faecalis T8]
 gi|256958169|ref|ZP_05562340.1| thiamine biosynthesis protein [Enterococcus faecalis DS5]
 gi|256960315|ref|ZP_05564486.1| thiamine biosynthesis protein [Enterococcus faecalis Merz96]
 gi|256962806|ref|ZP_05566977.1| thiamine biosynthesis protein [Enterococcus faecalis HIP11704]
 gi|257083367|ref|ZP_05577728.1| thiamine biosynthesis protein [Enterococcus faecalis Fly1]
 gi|257091154|ref|ZP_05585515.1| thiamin biosynthesis protein [Enterococcus faecalis CH188]
 gi|257420567|ref|ZP_05597557.1| thiazole biosynthesis protein thiI [Enterococcus faecalis X98]
 gi|300860868|ref|ZP_07106955.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TUSoD Ef11]
 gi|255967284|gb|EET97906.1| thiamine biosynthesis protein [Enterococcus faecalis T2]
 gi|256682463|gb|EEU22158.1| thiamine biosynthesis protein [Enterococcus faecalis T3]
 gi|256712329|gb|EEU27361.1| thiazole biosynthesis protein ThiI [Enterococcus faecalis T8]
 gi|256948665|gb|EEU65297.1| thiamine biosynthesis protein [Enterococcus faecalis DS5]
 gi|256950811|gb|EEU67443.1| thiamine biosynthesis protein [Enterococcus faecalis Merz96]
 gi|256953302|gb|EEU69934.1| thiamine biosynthesis protein [Enterococcus faecalis HIP11704]
 gi|256991397|gb|EEU78699.1| thiamine biosynthesis protein [Enterococcus faecalis Fly1]
 gi|256999966|gb|EEU86486.1| thiamin biosynthesis protein [Enterococcus faecalis CH188]
 gi|257162391|gb|EEU92351.1| thiazole biosynthesis protein thiI [Enterococcus faecalis X98]
 gi|300849907|gb|EFK77657.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TUSoD Ef11]
 gi|323478899|gb|ADX78338.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis 62]
 gi|327536087|gb|AEA94921.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis OG1RF]
          Length = 404

 Score = 87.3 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 59/188 (31%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +L+ SGG DS      A+ R   VE + F                 +K  +L  K    +
Sbjct: 181 MLMLSGGIDSPVAGYLAMKRGVEVEAVHF------ASPPYTSEQALQKAKDLAEKLVPYV 234

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G    + +              +  +I+        +     + L     +        I
Sbjct: 235 GTIQFIEVPF----------TEIQEEIKRVVPQGYLMTITRRLMLRLTDAIREMRKGLVI 284

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           + G      +          + +++ + +   +   +  P++ + K E  ++A+ I   +
Sbjct: 285 INGESLGQVAS---------QTLQSMVAINEVTSTPIIRPVVSMDKTEIIEIAEKIDTFE 335

Query: 192 LVNLILEE 199
           L     E+
Sbjct: 336 LAIQPFED 343


>gi|229547607|ref|ZP_04436332.1| thiamine biosynthesis protein [Enterococcus faecalis TX1322]
 gi|229307297|gb|EEN73284.1| thiamine biosynthesis protein [Enterococcus faecalis TX1322]
          Length = 404

 Score = 87.3 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 59/188 (31%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +L+ SGG DS      A+ R   VE + F                 +K  +L  K    +
Sbjct: 181 MLMLSGGIDSPVAGYLAMKRGVEVEAVHF------ASPPYTSEQALQKAKDLAEKLVPYV 234

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G    + +              +  +I+        +     + L     +        I
Sbjct: 235 GTIQFIEVPF----------TEIQEEIKRVVPQGYLMTITRRLMLRLTDAIREMRKGLVI 284

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           + G      +          + +++ + +   +   +  P++ + K E  ++A+ I   +
Sbjct: 285 INGESLGQVAS---------QTLQSMVAINEVTSTPIIRPVVSMDKTEIIEIAEKIDTFE 335

Query: 192 LVNLILEE 199
           L     E+
Sbjct: 336 LAIQPFED 343


>gi|227554381|ref|ZP_03984428.1| thiamine biosynthesis protein [Enterococcus faecalis HH22]
 gi|257080634|ref|ZP_05574995.1| thiamine biosynthesis protein [Enterococcus faecalis E1Sol]
 gi|257417101|ref|ZP_05594095.1| thiamine biosynthesis protein [Enterococcus faecalis AR01/DG]
 gi|257417815|ref|ZP_05594809.1| thiamine biosynthesis protein [Enterococcus faecalis T11]
 gi|227176500|gb|EEI57472.1| thiamine biosynthesis protein [Enterococcus faecalis HH22]
 gi|256988664|gb|EEU75966.1| thiamine biosynthesis protein [Enterococcus faecalis E1Sol]
 gi|257158929|gb|EEU88889.1| thiamine biosynthesis protein [Enterococcus faecalis ARO1/DG]
 gi|257159643|gb|EEU89603.1| thiamine biosynthesis protein [Enterococcus faecalis T11]
          Length = 404

 Score = 87.3 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 59/188 (31%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +L+ SGG DS      A+ R   VE + F                 +K  +L  K    +
Sbjct: 181 MLMLSGGIDSPVAGYLAMKRGVEVEAVHF------ASPPYTSEQALQKAKDLAEKLVPYV 234

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G    + +              +  +I+        +     + L     +        I
Sbjct: 235 GTIQFIEVPF----------TEIQEEIKRVVPQGYLMTITRRLMLRLTDAIREMRKGLVI 284

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           + G      +          + +++ + +   +   +  P++ + K E  ++A+ I   +
Sbjct: 285 INGESLGQVAS---------QTLQSMVAINEVTSTPIIRPVVSMDKTEIIEIAEKIDTFE 335

Query: 192 LVNLILEE 199
           L     E+
Sbjct: 336 LAIQPFED 343


>gi|227518200|ref|ZP_03948249.1| thiamine biosynthesis protein [Enterococcus faecalis TX0104]
 gi|229548185|ref|ZP_04436910.1| thiamine biosynthesis protein [Enterococcus faecalis ATCC 29200]
 gi|293382183|ref|ZP_06628126.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis R712]
 gi|293388506|ref|ZP_06633010.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis S613]
 gi|307272653|ref|ZP_07553901.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX0855]
 gi|307275082|ref|ZP_07556236.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX2134]
 gi|307281859|ref|ZP_07562075.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX0860]
 gi|312899331|ref|ZP_07758665.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX0470]
 gi|312902619|ref|ZP_07761824.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX0635]
 gi|312905722|ref|ZP_07764744.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis DAPTO 512]
 gi|312909083|ref|ZP_07767943.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis DAPTO 516]
 gi|312952223|ref|ZP_07771100.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX0102]
 gi|227074356|gb|EEI12319.1| thiamine biosynthesis protein [Enterococcus faecalis TX0104]
 gi|229306664|gb|EEN72660.1| thiamine biosynthesis protein [Enterococcus faecalis ATCC 29200]
 gi|291080466|gb|EFE17830.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis R712]
 gi|291082110|gb|EFE19073.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis S613]
 gi|306503890|gb|EFM73111.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX0860]
 gi|306508200|gb|EFM77316.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX2134]
 gi|306510648|gb|EFM79670.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX0855]
 gi|310628201|gb|EFQ11484.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis DAPTO 512]
 gi|310629810|gb|EFQ13093.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX0102]
 gi|310633957|gb|EFQ17240.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX0635]
 gi|311290645|gb|EFQ69201.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis DAPTO 516]
 gi|311293533|gb|EFQ72089.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX0470]
 gi|315030887|gb|EFT42819.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX4000]
 gi|315032304|gb|EFT44236.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX0017]
 gi|315036217|gb|EFT48149.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX0027]
 gi|315150955|gb|EFT94971.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX0012]
 gi|315154545|gb|EFT98561.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX0031]
 gi|315156414|gb|EFU00431.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX0043]
 gi|315163286|gb|EFU07303.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX0645]
 gi|315169316|gb|EFU13333.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX1341]
 gi|315174733|gb|EFU18750.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX1346]
 gi|315578978|gb|EFU91169.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX0630]
          Length = 398

 Score = 87.3 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 59/188 (31%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +L+ SGG DS      A+ R   VE + F                 +K  +L  K    +
Sbjct: 175 MLMLSGGIDSPVAGYLAMKRGVEVEAVHF------ASPPYTSEQALQKAKDLAEKLVPYV 228

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G    + +              +  +I+        +     + L     +        I
Sbjct: 229 GTIQFIEVPF----------TEIQEEIKRVVPQGYLMTITRRLMLRLTDAIREMRKGLVI 278

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           + G      +          + +++ + +   +   +  P++ + K E  ++A+ I   +
Sbjct: 279 INGESLGQVAS---------QTLQSMVAINEVTSTPIIRPVVSMDKTEIIEIAEKIDTFE 329

Query: 192 LVNLILEE 199
           L     E+
Sbjct: 330 LAIQPFED 337


>gi|126651353|ref|ZP_01723560.1| hypothetical protein BB14905_12325 [Bacillus sp. B14905]
 gi|126591882|gb|EAZ85965.1| hypothetical protein BB14905_12325 [Bacillus sp. B14905]
          Length = 404

 Score = 87.3 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 58/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +LL+ SGG DS       + R  R+E + F                 +K+  L  + 
Sbjct: 178 NGKSLLMLSGGIDSPVAGYLMMKRGVRLEAIHFF------SPPYTSENSLEKVKVLANEL 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                   +  +              + + I++    N  +     + L  A  +   +G
Sbjct: 232 TKFGANIRLHVIPF----------TEIQVLIKEKVPSNVSMTTTRRMMLKVADQVREEIG 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+             +  PL+   K E  +LA+ I
Sbjct: 282 ALAIVTGESLGQVASQTLESLTAINAVTNT---------PILRPLISSDKLEIIELAEQI 332

Query: 188 GGQDLVNLILEE 199
           G  +      E+
Sbjct: 333 GTYETSIQPFED 344


>gi|319651858|ref|ZP_08005983.1| hypothetical protein HMPREF1013_02595 [Bacillus sp. 2_A_57_CT2]
 gi|317396510|gb|EFV77223.1| hypothetical protein HMPREF1013_02595 [Bacillus sp. 2_A_57_CT2]
          Length = 402

 Score = 87.3 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 64/192 (33%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      ++ R   +E + F                ++K+++L  K 
Sbjct: 178 SGKAMLMLSGGIDSPVAGYLSMKRGLEIEAVHFH------SPPFTSERAKQKVIDLTEKL 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +  G   +  +           T+   +  Q      T    R ++  +         G
Sbjct: 232 ANIAGTVVLHIIPF---------TEIQQLIHQQVPSNYTMTATRRLMLRITDEIRNKNDG 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  I         S          + +E+   +   +   +  PL+ + K E  ++AQ I
Sbjct: 283 LAIITGESLGQVAS----------QTLESMFAINDVTTTPILRPLITMDKSEIIEIAQSI 332

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 333 DTHDISIRPFED 344


>gi|295692647|ref|YP_003601257.1| thiamine biosynthesis protein thii [Lactobacillus crispatus ST1]
 gi|295030753|emb|CBL50232.1| Thiamine biosynthesis protein thiI [Lactobacillus crispatus ST1]
          Length = 405

 Score = 87.3 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 63/190 (33%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS      AL R   +E + F                  K  EL     +
Sbjct: 179 KAVMMLSGGIDSPVASWLALKRGVDIEMVHFF------SPPYTTEKALAKAKELTGILAN 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+ + + +              +   I++       +  +    L  A  +  + G  
Sbjct: 233 YAGKINFIAVPFA----------EIQETIKEKLPEGYLMTVQRRFMLQLADRIRAQRGGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +++ + +   +   V  P+  + K E  KLA+DIG 
Sbjct: 283 AIFNGESVGQVAS---------QTLQSMVAINDVTTTPVIRPVATMDKTEIIKLAEDIGT 333

Query: 190 QDLVNLILEE 199
            DL     E+
Sbjct: 334 FDLSIQPFED 343


>gi|153953453|ref|YP_001394218.1| thiamine biosynthesis protein ThiI [Clostridium kluyveri DSM 555]
 gi|219854076|ref|YP_002471198.1| hypothetical protein CKR_0733 [Clostridium kluyveri NBRC 12016]
 gi|189030623|sp|A5N6D9|THII_CLOK5 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|254784221|sp|B9DZV9|THII_CLOK1 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|146346334|gb|EDK32870.1| ThiI [Clostridium kluyveri DSM 555]
 gi|219567800|dbj|BAH05784.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 381

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 57/188 (30%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           LL+ SGG DS         R  ++  + F                ++K+ EL    K   
Sbjct: 175 LLMLSGGIDSPVAGYMMARRGVQLNCIYFH------SHPYTSERAKEKVKELAGILKGYT 228

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G  ++                 + M+I +    +          +  A  +A +  I ++
Sbjct: 229 GNINLYITPF----------TEIQMQIIEKCRKDELTIIMRRFMMRIACIIADKYNINSV 278

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
             G      +                          V  PL+ + K +  ++A++IG  +
Sbjct: 279 TTGESIGQVASQTMEGLVVSNQAADR---------PVFRPLIAMDKVDIMEVAREIGTYE 329

Query: 192 LVNLILEE 199
              L  E+
Sbjct: 330 TSILPYED 337


>gi|328468698|gb|EGF39683.1| thiamine biosynthesis protein ThiI [Lactobacillus helveticus MTCC
           5463]
          Length = 405

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 63/190 (33%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS      A+ R   +E + F                  K  EL     +
Sbjct: 179 KAVMMLSGGIDSPVASYLAMKRGVDIEMVHFF------SPPYTTEKALTKAKELTGILAN 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+ + + +              +   I++       +  +    L  A  +  + G  
Sbjct: 233 YAGKINFIAVPFA----------EIQETIKEKLPEGYLMTVQRRFMLQLADRIRAKRGGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +++ + +   +   V  P+  + K E  KLA+DIG 
Sbjct: 283 AIFNGESVGQVAS---------QTLQSMVAINDVTTTPVIRPVATMDKTEIIKLAEDIGT 333

Query: 190 QDLVNLILEE 199
            DL     E+
Sbjct: 334 FDLSIQPFED 343


>gi|227829808|ref|YP_002831587.1| ExsB family protein [Sulfolobus islandicus L.S.2.15]
 gi|227456255|gb|ACP34942.1| ExsB family protein [Sulfolobus islandicus L.S.2.15]
          Length = 213

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 86/236 (36%), Gaps = 42/236 (17%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-RNKVELECRLCVRKKIV 61
           DI+K     LLLFS G DSS+   +   +    + L  +YGQ   +++L+    + +K+ 
Sbjct: 13  DIMKF----LLLFSSGLDSSSVAYYYAKKSLDFDCLFINYGQSSARMQLKYGKIICEKLK 68

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
             +         +  +    L                     P+  +  RN++ +  A  
Sbjct: 69  RRLIIINAKNLGEAFVNNDWLR--------------------PHEPIIHRNLVIVPIAIA 108

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            A + G   +++   + D    P+ R      +E    LG    V   TP +   KY   
Sbjct: 109 YAKQNGYERVIMATIKEDCEYEPNRR----DVMEKLKELGEILGVRFETPFVNFPKYLLL 164

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           K+    G      L    +++C LG +       Y C  C  C  R + + + K +
Sbjct: 165 KIGIKSG------LDPSLTYSCLLGHK-------YHCGKCSQCLKRIEAFKQAKIR 207


>gi|304385270|ref|ZP_07367615.1| thiamine biosynthesis/tRNA modification protein ThiI [Pediococcus
           acidilactici DSM 20284]
 gi|304328477|gb|EFL95698.1| thiamine biosynthesis/tRNA modification protein ThiI [Pediococcus
           acidilactici DSM 20284]
          Length = 405

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 57/190 (30%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +++ SGG DS       + R   +E + F                  K  EL  K   
Sbjct: 179 KGMMMLSGGIDSPVAAYLGMKRGVEMEMVHFF------SPPYTSEQALAKAKELSGKLAA 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G    L +              +   I++       +  +  + L     LA + G  
Sbjct: 233 YSGNVQFLQVPFA----------EIQETIKEKCPEGYLMTIQRRMMLRLTVALAQKRGGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +                  +   + + +  P++ + K E  ++A++I  
Sbjct: 283 AIFNGESLGQVASQTMESMM---------AINDVTTMPIIRPVVSMDKNEIIEIAKEIDT 333

Query: 190 QDLVNLILEE 199
            DL  +  E+
Sbjct: 334 YDLSIMPFED 343


>gi|270290998|ref|ZP_06197221.1| thiamine biosynthesis/tRNA modification protein ThiI [Pediococcus
           acidilactici 7_4]
 gi|270280394|gb|EFA26229.1| thiamine biosynthesis/tRNA modification protein ThiI [Pediococcus
           acidilactici 7_4]
          Length = 405

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 57/190 (30%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +++ SGG DS       + R   +E + F                  K  EL  K   
Sbjct: 179 KGMMMLSGGIDSPVAAYLGMKRGVEMEMVHFF------SPPYTSEQALAKAKELSGKLAA 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G    L +              +   I++       +  +  + L     LA + G  
Sbjct: 233 YSGNVQFLQVPFA----------EIQETIKEKCPEGYLMTIQRRMMLRLTVALAQKRGGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +                  +   + + +  P++ + K E  ++A++I  
Sbjct: 283 AIFNGESLGQVASQTMESMM---------AINDVTTMPIIRPVVSMDKNEIIEIAKEIDT 333

Query: 190 QDLVNLILEE 199
            DL  +  E+
Sbjct: 334 YDLSIMPFED 343


>gi|284997107|ref|YP_003418874.1| ExsB family protein [Sulfolobus islandicus L.D.8.5]
 gi|284445002|gb|ADB86504.1| ExsB family protein [Sulfolobus islandicus L.D.8.5]
          Length = 213

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 86/236 (36%), Gaps = 42/236 (17%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIV 61
           DI+K     LLLFS G DSS+   +   +    + L  +YGQ + +++L+    + +K+ 
Sbjct: 13  DIMKF----LLLFSSGLDSSSVAYYYAKKSLDFDCLFINYGQSSVRMQLKYGKIICEKLK 68

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
             +         +  +    L                     P+  +  RN++ +  A  
Sbjct: 69  RRLIIINAKNLGEAFVNNDWLR--------------------PHEPIIHRNLVIVPIAIA 108

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            A + G   +++     D    P+ R      +E    LG    V   TP +   KY   
Sbjct: 109 YAKQNGYERVIMATIREDCEYEPNRR----DVMEKLKELGEILGVRFETPFVNFPKYLLL 164

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           K+    G      L    +++C LG +       Y C  C  C  R + + + K +
Sbjct: 165 KIGIKSG------LDPSLTYSCLLGHK-------YHCGKCSQCLKRIEAFKQAKIR 207


>gi|299535437|ref|ZP_07048759.1| thiamine biosynthesis protein [Lysinibacillus fusiformis ZC1]
 gi|298729198|gb|EFI69751.1| thiamine biosynthesis protein [Lysinibacillus fusiformis ZC1]
          Length = 402

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 57/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +LL+ SGG DS       + R  R+E + F                 +K+  L  + 
Sbjct: 178 NGKSLLMLSGGIDSPVAGYLMMKRGVRLEAIHFF------SPPYTSQNSLEKVKVLANEL 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                   +  +              + + I++    N  +     + L  A  +   +G
Sbjct: 232 TKFGASIRLHVIPF----------TEIQVLIKEKVPSNVSMTTTRRMMLKVADQVREEIG 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+             +  PL+   K E   +A+ I
Sbjct: 282 ALAIVTGESLGQVASQTLESLTAINAVTNT---------PILRPLISTDKLEIIDIAEKI 332

Query: 188 GGQDLVNLILEE 199
           G  +      E+
Sbjct: 333 GTYETSIQPFED 344


>gi|313623578|gb|EFR93753.1| thiamine biosynthesis/tRNA modification protein ThiI [Listeria
           innocua FSL J1-023]
          Length = 403

 Score = 87.3 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A  R   +E + F                ++K ++L  K 
Sbjct: 177 SGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHFY------SPPYTSEQAKQKAIDLAGKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  +              +   I+     +  +     + L     L  +  
Sbjct: 231 AKYSGQVQMHIVPF----------TEIQEVIKQQIPESVIMTVTRRMMLRITDELRRKRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+             +  P++ + K E  ++AQ I
Sbjct: 281 GLAIVNGESLGQVASQTLESMLAINAVTAT---------PIIRPVVSMDKNEIIQIAQKI 331

Query: 188 GGQDLVNLILEE 199
              +L     E+
Sbjct: 332 DTYNLSVQPFED 343


>gi|330685043|gb|EGG96716.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus epidermidis VCU121]
          Length = 407

 Score = 86.9 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 67/190 (35%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                ++K++EL     +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMKRGVTIEAIHFH------SPPFTSEKAKEKVIELTRIMSE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +             ++  +I  +  P   +     + +  A  L +++G  
Sbjct: 233 LVGPIKLHIVPF----------TDLQKQINKSVHPRYTMTSTRRLMMRVADQLVHKIGAL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + + +   +   +   V  PL+ L K +  K A++IG 
Sbjct: 283 GIVNGENLGQVAS---------QTLNSMYAINHVTSTPVLRPLLTLDKEDIVKKAKEIGT 333

Query: 190 QDLVNLILEE 199
            ++     E+
Sbjct: 334 FEVSIQPYED 343


>gi|291485388|dbj|BAI86463.1| hypothetical protein BSNT_04307 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 401

 Score = 86.9 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 60/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+L+ SGG DS     +A+ R   VE + F                ++K+++L      
Sbjct: 179 KAMLMLSGGFDSPVAGFYAMKRGLSVEAVHFF------SPPYTSERAKQKVMDLAKCLSR 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G   +  +                  IQ     N  +     + L  A  +  +    
Sbjct: 233 FGGSMTLHIVPF----------TKTQELIQKQIPENYTMTATRRLMLQIADRIREKRNGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++ G      +         I A+ +           +  PL+ + K E  + +++IG 
Sbjct: 283 AVITGESLGQVASQTLESMYAINAVTST---------PILRPLIAMDKTEIIEKSREIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 YETSIQPFED 343


>gi|296491933|ref|YP_003662400.1| hypothetical protein XNC1_p0121 [Xenorhabdus nematophila ATCC
           19061]
 gi|289176820|emb|CBJ92989.1| conserved hypothetical protein [Xenorhabdus nematophila ATCC 19061]
          Length = 442

 Score = 86.9 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/226 (11%), Positives = 59/226 (26%), Gaps = 19/226 (8%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            + LFSGG DS+      L        +S  Y    K +   +  + +K+     +++ +
Sbjct: 158 CVSLFSGGLDSAIGAIDLLAAGRAPLLVSHAY----KGDKSRQDQIAEKLNGRYSRFEIN 213

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                        +I+  + + N              V  +  + L         L    
Sbjct: 214 ADPH---IYQGDTEITMRTRSLNFLAFAAVGACAVQEVSQQEKVDLFVPENGFISLNAPL 270

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
                     +      H         +         +  P  +  K +          +
Sbjct: 271 ----TPRRIGTLSTRTTHPHFITSVQKLFDAAGIPCQIINPYQFKTKGQMASQCL---NK 323

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            L++ ++E + +C              C  C  C +R+        
Sbjct: 324 QLLSEVVESTVSC-----SHWKRRNQQCGVCVPCIIRRASLHAGGI 364


>gi|169829584|ref|YP_001699742.1| thiamine biosynthesis protein [Lysinibacillus sphaericus C3-41]
 gi|238688204|sp|B1HX36|THII_LYSSC RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|168994072|gb|ACA41612.1| Probable thiamine biosynthesis protein [Lysinibacillus sphaericus
           C3-41]
          Length = 404

 Score = 86.9 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 58/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +LL+ SGG DS       + R  R+E + F                 +K+  L  + 
Sbjct: 178 NGKSLLMLSGGIDSPVAGYLMMKRGVRLEAIHFF------SPPYTSQNSLEKVKVLANEL 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                   +  +              + + I++    N  +     + L  A  +   +G
Sbjct: 232 TKFGANIRLHVIPF----------TEIQVLIKEKVPSNVSMTTTRRMMLKVADQVREEIG 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+             +  PL+   K E  +LA+ I
Sbjct: 282 ALAIVTGESLGQVASQTLESLTAINAVTNT---------PILRPLISSDKLEIIELAEQI 332

Query: 188 GGQDLVNLILEE 199
           G  +      E+
Sbjct: 333 GTYETSIQPFED 344


>gi|307269910|ref|ZP_07551236.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX4248]
 gi|307288320|ref|ZP_07568315.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX0109]
 gi|306500706|gb|EFM70028.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX0109]
 gi|306513700|gb|EFM82306.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX4248]
 gi|315028132|gb|EFT40064.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX2137]
 gi|315165979|gb|EFU09996.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX1302]
 gi|329573455|gb|EGG55063.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis TX1467]
          Length = 398

 Score = 86.9 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 59/188 (31%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +L+ SGG DS      A+ R   VE + F                 +K  +L  K    +
Sbjct: 175 MLMLSGGIDSPVAGYLAMKRGVEVEAVHF------ASPPYTSEQALQKAKDLAGKLVPYV 228

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G    + +              +  +I+        +     + L     +        I
Sbjct: 229 GTIQFIEVPF----------TEIQEEIKRVVPQGYLMTITRRLMLRLTDAIREMRKGLVI 278

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           + G      +          + +++ + +   +   +  P++ + K E  ++A+ I   +
Sbjct: 279 INGESLGQVAS---------QTLQSMVAINEVTSTPIIRPVVSMDKTEIIEIAEKIDTFE 329

Query: 192 LVNLILEE 199
           L     E+
Sbjct: 330 LAIQPFED 337


>gi|294779637|ref|ZP_06745028.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis PC1.1]
 gi|294453294|gb|EFG21705.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecalis PC1.1]
          Length = 404

 Score = 86.9 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 59/188 (31%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +L+ SGG DS      A+ R   VE + F                 +K  +L  K    +
Sbjct: 181 MLMLSGGIDSPVAGYLAMKRGVEVEAVHF------ASPPYTSEQALQKAKDLAGKLVPYV 234

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G    + +              +  +I+        +     + L     +        I
Sbjct: 235 GTIQFIEVPF----------TEIQEEIKRVVPQGYLMTITRRLMLRLTDAIREMRKGLVI 284

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           + G      +          + +++ + +   +   +  P++ + K E  ++A+ I   +
Sbjct: 285 INGESLGQVAS---------QTLQSMVAINEVTSTPIIRPVVSMDKTEIIEIAEKIDTFE 335

Query: 192 LVNLILEE 199
           L     E+
Sbjct: 336 LAIQPFED 343


>gi|284161310|ref|YP_003399933.1| thiamine biosynthesis/tRNA modification protein ThiI [Archaeoglobus
           profundus DSM 5631]
 gi|284011307|gb|ADB57260.1| thiamine biosynthesis/tRNA modification protein ThiI [Archaeoglobus
           profundus DSM 5631]
          Length = 359

 Score = 86.9 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 64/187 (34%), Gaps = 21/187 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + LFSGG DS       + R   V  + FD      +         +++ ++    K+
Sbjct: 167 KLVSLFSGGIDSPVATWLMMKRGCEVVPIYFD------IRPFTSERAIERVEKVAKVLKE 220

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              +  ++         H +    V   +++  L +          L  A  +A  +G  
Sbjct: 221 YDPDFDVIV------KEHGNFLMKVKDILKEKRLESYTCIFCKRRMLKVAEEVAKDVGAK 274

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + ++  + +     + ++ PL+   K E  ++A+ IG 
Sbjct: 275 GIVTGDSLGQVAS---------QTLDNLLVISQACSIPIYRPLIGFDKIEIEEIARKIGT 325

Query: 190 QDLVNLI 196
            +   + 
Sbjct: 326 FEYSTIP 332


>gi|257077442|ref|ZP_05571803.1| thiamine biosynthesis protein [Enterococcus faecalis JH1]
 gi|257088075|ref|ZP_05582436.1| thiamine biosynthesis protein [Enterococcus faecalis D6]
 gi|256985472|gb|EEU72774.1| thiamine biosynthesis protein [Enterococcus faecalis JH1]
 gi|256996105|gb|EEU83407.1| thiamine biosynthesis protein [Enterococcus faecalis D6]
          Length = 404

 Score = 86.9 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 59/188 (31%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +L+ SGG DS      A+ R   VE + F                 +K  +L  K    +
Sbjct: 181 MLMLSGGIDSPVAGYLAMKRGVEVEAVHF------ASPPYTSEQALQKAKDLAGKLVPYV 234

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G    + +              +  +I+        +     + L     +        I
Sbjct: 235 GTIQFIEVPF----------TEIQEEIKRVVPQGYLMTITRRLMLRLTDAIREMRKGLVI 284

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           + G      +          + +++ + +   +   +  P++ + K E  ++A+ I   +
Sbjct: 285 INGESLGQVAS---------QTLQSMVAINEVTSTPIIRPVVSMDKTEIIEIAEKIDTFE 335

Query: 192 LVNLILEE 199
           L     E+
Sbjct: 336 LAIQPFED 343


>gi|153854412|ref|ZP_01995690.1| hypothetical protein DORLON_01685 [Dorea longicatena DSM 13814]
 gi|149752938|gb|EDM62869.1| hypothetical protein DORLON_01685 [Dorea longicatena DSM 13814]
          Length = 395

 Score = 86.9 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 58/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             SA+LL SGG DS         R   +E   F                ++K+V+L  K 
Sbjct: 182 NGSAMLLLSGGIDSPVAGYMVSKRGVSLEATYFH------APPYTSERAKQKVVDLAKKV 235

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +             ++ + I D    +          +  A   A   G
Sbjct: 236 AKYSGPIKLHVVNF----------TDIQLYIYDQCPHDELTIIMRRYMMRIAEHFAKEDG 285

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +          + +++         + V+ PL+   K E   +++ I
Sbjct: 286 CLGMITGESIGQVAS---------QTMQSLAATNDVCTMPVYRPLIGFDKQEIVDVSEKI 336

Query: 188 GGQDLVNLILEE 199
              +      E+
Sbjct: 337 DTYETSIQPFED 348


>gi|256848778|ref|ZP_05554212.1| thiazole biosynthesis protein [Lactobacillus crispatus MV-1A-US]
 gi|256714317|gb|EEU29304.1| thiazole biosynthesis protein [Lactobacillus crispatus MV-1A-US]
          Length = 405

 Score = 86.9 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 61/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS      AL R   +E + F                  K  EL     +
Sbjct: 179 KAVMMLSGGIDSPVASWLALKRGVDIEMVHFF------SPPYTTEKALAKAKELTGILAN 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+ + + +              +   I++       +  +    L  A  +  + G  
Sbjct: 233 YAGKINFIAVPFA----------EIQETIKEKLPEGYLMTVQRRFMLQLADRIRAQRGGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +++ + +   +   V  P+  + K E    A++IG 
Sbjct: 283 AIFNGESVGQVAS---------QTLQSMVAINDVTTTPVIRPVATMDKTEIIAKAEEIGT 333

Query: 190 QDLVNLILEE 199
            DL     E+
Sbjct: 334 FDLSIQPFED 343


>gi|256842858|ref|ZP_05548346.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           crispatus 125-2-CHN]
 gi|262045824|ref|ZP_06018788.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           crispatus MV-3A-US]
 gi|293381693|ref|ZP_06627674.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           crispatus 214-1]
 gi|312977623|ref|ZP_07789370.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           crispatus CTV-05]
 gi|256614278|gb|EEU19479.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           crispatus 125-2-CHN]
 gi|260573783|gb|EEX30339.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           crispatus MV-3A-US]
 gi|290921740|gb|EFD98761.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           crispatus 214-1]
 gi|310895362|gb|EFQ44429.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           crispatus CTV-05]
          Length = 405

 Score = 86.9 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 61/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS      AL R   +E + F                  K  EL     +
Sbjct: 179 KAVMMLSGGIDSPVASWLALKRGVDIEMVHFF------SPPYTTEKALAKAKELTGILAN 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+ + + +              +   I++       +  +    L  A  +  + G  
Sbjct: 233 YAGKINFIAVPFA----------EIQETIKEKLPEGYLMTVQRRFMLQLADRIRAQRGGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +++ + +   +   V  P+  + K E    A++IG 
Sbjct: 283 AIFNGESVGQVAS---------QTLQSMVAINDVTTTPVIRPVATMDKTEIIAKAEEIGT 333

Query: 190 QDLVNLILEE 199
            DL     E+
Sbjct: 334 FDLSIQPFED 343


>gi|281412534|ref|YP_003346613.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermotoga
           naphthophila RKU-10]
 gi|281373637|gb|ADA67199.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermotoga
           naphthophila RKU-10]
          Length = 385

 Score = 86.9 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 68/198 (34%), Gaps = 33/198 (16%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+LL SGG DS     +AL R   +E+++F                 +K+ +++   ++
Sbjct: 173 KAVLLLSGGIDSPVAGWYALKRGVLIESVTF------VSPPFTSEGAVEKVRDILRVLRE 226

Query: 70  SLGED----HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             G      HI+ L  L             ++++ N      +          A  +A  
Sbjct: 227 FSGGHPLRLHIVNLTKL------------QLEVKKNVPDKYSLIMYRRSMFRIAEKIAEE 274

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G      G      +          + +E   ++   +   V  PL    K E  + A+
Sbjct: 275 TGAVAFYTGENIGQVAS---------QTLENLWSIESVTTRPVIRPLSGFDKTEIVEKAK 325

Query: 186 DIGGQDLVNLILEESHTC 203
           +IG  ++     ++  +C
Sbjct: 326 EIGTYEISIKPYQD--SC 341


>gi|170288930|ref|YP_001739168.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermotoga
           sp. RQ2]
 gi|170176433|gb|ACB09485.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermotoga
           sp. RQ2]
          Length = 385

 Score = 86.9 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 68/198 (34%), Gaps = 33/198 (16%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+LL SGG DS     +AL R   +E+++F                 +K+ +++   ++
Sbjct: 173 KAVLLLSGGIDSPVAGWYALKRGVLIESVTF------VSPPFTSEGAVEKVRDILRVLRE 226

Query: 70  SLGED----HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             G      HI+ L  L             ++++ N      +          A  +A  
Sbjct: 227 FSGGHPLRLHIVNLTKL------------QLEVKKNVPDKYSLIMYRRSMFRIAEKIAEE 274

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G      G      +          + +E   ++   +   V  PL    K E  + A+
Sbjct: 275 TGAVAFYTGENIGQVAS---------QTLENLWSIESVTTRPVIRPLSGFDKTEIVEKAK 325

Query: 186 DIGGQDLVNLILEESHTC 203
           +IG  ++     ++  +C
Sbjct: 326 EIGTYEISIKPYQD--SC 341


>gi|148270124|ref|YP_001244584.1| thiamine biosynthesis protein ThiI [Thermotoga petrophila RKU-1]
 gi|147735668|gb|ABQ47008.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermotoga
           petrophila RKU-1]
          Length = 398

 Score = 86.9 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 68/198 (34%), Gaps = 33/198 (16%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+LL SGG DS     +AL R   +E+++F                 +K+ +++   ++
Sbjct: 186 KAVLLLSGGIDSPVAGWYALKRGVLIESVTF------VSPPFTSEGAVEKVRDILRVLRE 239

Query: 70  SLGED----HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             G      HI+ L  L             ++++ N      +          A  +A  
Sbjct: 240 FSGGHPLRLHIVNLTKL------------QLEVKKNVPDKYSLIMYRRSMFRIAEKIAEE 287

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G      G      +          + +E   ++   +   V  PL    K E  + A+
Sbjct: 288 TGAVAFYTGENIGQVAS---------QTLENLWSIESVTTRPVIRPLSGFDKTEIVEKAK 338

Query: 186 DIGGQDLVNLILEESHTC 203
           +IG  ++     ++  +C
Sbjct: 339 EIGTYEISIKPYQD--SC 354


>gi|228477921|ref|ZP_04062535.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           salivarius SK126]
 gi|228250411|gb|EEK09651.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           salivarius SK126]
          Length = 407

 Score = 86.9 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 55/190 (28%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +L+ SGG DS      AL R   +E + F                 KK  +L  K   
Sbjct: 181 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKLTK 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G    + +              +  +I++       +       +     +    G  
Sbjct: 235 FGGNIQFIEVPF----------TEIQEEIKEKAPEAYLMTLTRRFMMRITDRIREERGGL 284

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I+ G      +         I A+         +   V  P++ + K E   LAQ I  
Sbjct: 285 VIINGESLGQVASQTMESMQAINAV---------TCTPVIRPVVTMDKLEIIDLAQKIDT 335

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 336 FDISIQPFED 345


>gi|29377398|ref|NP_816552.1| thiazole biosynthesis protein ThiI [Enterococcus faecalis V583]
 gi|44888453|sp|Q82ZW3|THII_ENTFA RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|29344865|gb|AAO82622.1| thiazole biosynthesis protein ThiI [Enterococcus faecalis V583]
          Length = 404

 Score = 86.9 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 59/188 (31%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +L+ SGG DS      A+ R   VE + F                 +K  +L  K    +
Sbjct: 181 MLMLSGGIDSPVAGYLAMKRGVEVEAVHF------ASPPYTSEQALQKAKDLAEKLVPYV 234

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G    + +              +  +I+        +     + L     +        I
Sbjct: 235 GTIQFIEVPF----------TEIQEEIKRVVPQGYLMTITRRLMLRLTDAIREMRKGLVI 284

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           + G      +          + +++ + +   +   +  P++ + K E  ++A+ I   +
Sbjct: 285 INGESLAQVAS---------QTLQSMVAINEVTSTPIIRPVVSMDKTEIIEIAEKIDTFE 335

Query: 192 LVNLILEE 199
           L     E+
Sbjct: 336 LAIQPFED 343


>gi|329766926|ref|ZP_08258454.1| thiamine biosynthesis/tRNA modification protein ThiI [Gemella
           haemolysans M341]
 gi|328837651|gb|EGF87276.1| thiamine biosynthesis/tRNA modification protein ThiI [Gemella
           haemolysans M341]
          Length = 416

 Score = 86.5 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 70/195 (35%), Gaps = 25/195 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +  +  ALLL SGG DS         +   VE + F      +          +KI +L 
Sbjct: 175 VNTSSKALLLLSGGIDSPVAAHTLQVKGVEVEMIHF------QSPPFTSAEALQKIFDLT 228

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            K  + +G+  +  +              +  +I      N  +       L  A  +A 
Sbjct: 229 IKLSEVVGKIKLHVVNF----------TKLQTEIVKRVPSNYTMTSTRRFMLRIAEEVAK 278

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           + G   I  G      +          + +E+   +   +++ +  PL+ + K +  K+A
Sbjct: 279 KEGCLAIATGESLGQVAS---------QTLESMNCINEVTNLPILRPLLTMDKVDIIKIA 329

Query: 185 QDIGGQDLVNLILEE 199
           Q+I   ++ NL  E+
Sbjct: 330 QEIETLEISNLPFED 344


>gi|254172603|ref|ZP_04879278.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermococcus
           sp. AM4]
 gi|214033532|gb|EEB74359.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermococcus
           sp. AM4]
          Length = 380

 Score = 86.5 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 63/187 (33%), Gaps = 24/187 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L SGG DS       + R   V  +    G++        L   +KI   + K+  
Sbjct: 181 KVVALLSGGIDSPVAAFLMMKRGVEVIPVHIYMGEKT-------LEKVRKIWNQLKKYHY 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
               + I+              + +  K+++             + +  A  +A   G  
Sbjct: 234 GGKAELIVVKPK--------ERERILEKLRELGKEKYTCVFCKFMMVRHADKIAKDFGAK 285

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV+G      +          + +E    +   S + ++ PL+ + K E   +A+ IG 
Sbjct: 286 GIVMGDSLGQVAS---------QTLENMYIVSQASDLPIYRPLIGMDKEEIVSIAKRIGT 336

Query: 190 QDLVNLI 196
            +L  L 
Sbjct: 337 FELSTLP 343


>gi|325689808|gb|EGD31812.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK115]
          Length = 404

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 52/192 (27%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TKFGGNIKFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREERS 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             +  P++ + K E   +A+ I
Sbjct: 281 AQVIINGESLGQVASQTIESMQAINAVTNT---------PIIRPVVTMDKLEIIDIAEKI 331

Query: 188 GGQDLVNLILEE 199
               +     E+
Sbjct: 332 DTFQISIQPFED 343


>gi|56964514|ref|YP_176245.1| thiamine biosynthesis protein ThiI [Bacillus clausii KSM-K16]
 gi|81365682|sp|Q5WEC6|THII_BACSK RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|56910757|dbj|BAD65284.1| thiamine biosynthesis protein ThiI [Bacillus clausii KSM-K16]
          Length = 400

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   L L SGG DS       + R   VE L F                ++K+++L  + 
Sbjct: 177 SGKVLHLLSGGIDSPVAAHMLMGRGAEVEMLHFH------SPPYTNERAKQKVIDLTREL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                   +  +             ++   I      +  +     + L  A  +A   G
Sbjct: 231 TKFGRTITLHFVPF----------TDIQTHIHKEVPSSYEMTIMRRMMLRIADRIARERG 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  I  G      +       +          +   +++ V  PL+ + K  T   A+ I
Sbjct: 281 ILAISNGESLGQVASQTLASMN---------TINEMTNLPVLRPLLAMDKETTIAYAKRI 331

Query: 188 GGQDLVNLILEE 199
           G  +   L  E+
Sbjct: 332 GTYETSILPYED 343


>gi|240103538|ref|YP_002959847.1| thiamine biosynthesis protein ThiI [Thermococcus gammatolerans EJ3]
 gi|239911092|gb|ACS33983.1| Thiamine biosynthesis protein (ThiI) [Thermococcus gammatolerans
           EJ3]
          Length = 380

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 63/187 (33%), Gaps = 24/187 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L SGG DS       + R   V  +    G++        L   +KI   + K+  
Sbjct: 181 KVVALLSGGIDSPVAAFLMMKRGVEVIPVHIYMGEKT-------LEKVRKIWNQLKKYHY 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
               + I+              K +  K+++             + +  A  +A   G  
Sbjct: 234 GGKAELIVVKPK--------ERKRIIEKLKELGKEKYTCVFCKFMMVRHADKIAKDFGAK 285

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV+G      +          + +E    +   S + ++ PL+ + K E   +A+ IG 
Sbjct: 286 GIVMGDSLGQVAS---------QTLENMYIVSQASDLPIYRPLIGMDKEEIVSIAKRIGT 336

Query: 190 QDLVNLI 196
            +L  L 
Sbjct: 337 FELSTLP 343


>gi|167772390|ref|ZP_02444443.1| hypothetical protein ANACOL_03767 [Anaerotruncus colihominis DSM
           17241]
 gi|167665493|gb|EDS09623.1| hypothetical protein ANACOL_03767 [Anaerotruncus colihominis DSM
           17241]
          Length = 389

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+LL SGG DS         R   +  + F                 +K+  L  K 
Sbjct: 178 SGRAMLLISGGIDSPVAGYMMGKRGLEIAAVHF------VSPPYTSAHALEKVRTLCKKM 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +                + I+D    + F        +  A  LA   G
Sbjct: 232 AAWCGRVRLFVVPF----------TETQLAIRDRCPEDVFTIIMRRCMMKIAERLARENG 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +           A            + V  P++ + K E  K+A  I
Sbjct: 282 CGALITGESVAQVASQTLDAIACTDAA---------CTMPVLRPVIGMDKDEIVKVAYKI 332

Query: 188 GGQDLVNLILEE 199
              +   L  E+
Sbjct: 333 DTFETSILPYED 344


>gi|15644442|ref|NP_229494.1| thiamine biosynthesis protein ThiI [Thermotoga maritima MSB8]
 gi|6686039|sp|Q9X220|THII_THEMA RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|4982270|gb|AAD36761.1|AE001809_13 thiamin biosynthesis protein ThiI [Thermotoga maritima MSB8]
          Length = 388

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 72/198 (36%), Gaps = 33/198 (16%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+LL SGG DS     +AL R   +E+++F                 +K+ +++   ++
Sbjct: 176 KAVLLLSGGIDSPVAGWYALKRGVLIESVTF------VSPPFTSEGAVEKVRDILRVLRE 229

Query: 70  SLGED----HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             G      HI+ L  L           + +K +  +  +  +  R++  +     +A  
Sbjct: 230 FSGGHPLRLHIVNLTKL----------QLEVKKRVPDKYSLIMYRRSMFRIA--EKIAEE 277

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G      G      +          + +E   ++   +   V  PL    K E  + A+
Sbjct: 278 TGAVAFYTGENIGQVAS---------QTLENLWSIESVTTRPVIRPLSGFDKTEIVEKAK 328

Query: 186 DIGGQDLVNLILEESHTC 203
           +IG  ++     ++  +C
Sbjct: 329 EIGTYEISIKPYQD--SC 344


>gi|225181215|ref|ZP_03734661.1| thiamine biosynthesis/tRNA modification protein ThiI [Dethiobacter
           alkaliphilus AHT 1]
 gi|225168184|gb|EEG76989.1| thiamine biosynthesis/tRNA modification protein ThiI [Dethiobacter
           alkaliphilus AHT 1]
          Length = 390

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LLL SGG DS      ++ R   +E + F                ++K+++L  +   
Sbjct: 178 KGLLLISGGIDSPVAGWMSMKRGVTLEAIHFH------SFPFTSDRAKEKVIDLCRELTR 231

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+  +          H +    +  +++        V     +    A  LA + G  
Sbjct: 232 FGGKIRL----------HVAHFTEIQKELRLKTPERLTVTLMRRMMFRIAERLAEQRGAL 281

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++ G      +       + I  +         + + V  PL+ L K E   +++ I  
Sbjct: 282 ALITGESLGQVASQTMESINVIEKV---------TTIPVFRPLIGLDKEEIMNISRRIDT 332

Query: 190 QDLVNLILEE 199
             +     E+
Sbjct: 333 YPISIRPYED 342


>gi|88703765|ref|ZP_01101481.1| conserved hypothetical protein [Congregibacter litoralis KT71]
 gi|88702479|gb|EAQ99582.1| conserved hypothetical protein [Congregibacter litoralis KT71]
          Length = 415

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/221 (12%), Positives = 58/221 (26%), Gaps = 19/221 (8%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            + LFSGG DS+      L +      +S  Y    K +   +  + + +     +++ +
Sbjct: 131 CVSLFSGGLDSAIGAIDLLAQGRTPLLVSHAY----KGDKTHQDRIAEALEGRFSRFEVN 186

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                      +   + S      A            V     + L         L    
Sbjct: 187 ADPHLYTGETDITMRTRSLNFLAFAAVGACAVQ---AVSQEETVDLFVPENGFISLNAPL 243

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
                     +      H         +   +     +  P  +  K    ++A     +
Sbjct: 244 ----TPRRIGTLSTRTTHPHFIESIQNLFGAVGIPCRIVNPYQFETKG---QMATKCQNR 296

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
            L+  I++ + +C              C  C  C +R+   
Sbjct: 297 QLLADIVDSTVSC-----SHWKRSNQQCGICVPCIIRRAAL 332


>gi|329667574|gb|AEB93522.1| putative thiamine biosynthesis protein ThiI [Lactobacillus
           johnsonii DPC 6026]
          Length = 405

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS      A+ R   ++ + F                  K  EL     +
Sbjct: 179 KAVMMLSGGIDSPVASYLAMKRGVEIDMVHFF------SPPYTTEKALAKAKELTGILAN 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+ + + +              +  +I++       +  +    L  A  +    G  
Sbjct: 233 YSGKINFIAVPF----------TEIQEQIKEKLPEGYLMTIQRRFMLQLADRIRAMRGGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+ + +   +   V  P+  + K E  KLA+ IG 
Sbjct: 283 AIFNGESVGQVAS---------QTLESMVAINDVTSTPVLRPVATMDKTEIIKLAEQIGT 333

Query: 190 QDLVNLILEE 199
            DL     E+
Sbjct: 334 FDLSIEPFED 343


>gi|268319724|ref|YP_003293380.1| thiamine biosynthesis protein ThiI [Lactobacillus johnsonii FI9785]
 gi|262398099|emb|CAX67113.1| thiamine biosynthesis protein ThiI [Lactobacillus johnsonii FI9785]
          Length = 405

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS      A+ R   ++ + F                  K  EL     +
Sbjct: 179 KAVMMLSGGIDSPVASYLAMKRGVEIDMVHFF------SPPYTTEKALAKAKELTGILAN 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+ + + +              +  +I++       +  +    L  A  +    G  
Sbjct: 233 YSGKINFIAVPF----------TEIQEQIKEKLPEGYLMTIQRRFMLQLADRIRAMRGGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+ + +   +   V  P+  + K E  KLA+ IG 
Sbjct: 283 AIFNGESVGQVAS---------QTLESMVAINDVTSTPVLRPVATMDKTEIIKLAEQIGT 333

Query: 190 QDLVNLILEE 199
            DL     E+
Sbjct: 334 FDLSIEPFED 343


>gi|227889738|ref|ZP_04007543.1| thiamine-phosphate kinase [Lactobacillus johnsonii ATCC 33200]
 gi|227849602|gb|EEJ59688.1| thiamine-phosphate kinase [Lactobacillus johnsonii ATCC 33200]
          Length = 405

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS      A+ R   ++ + F                  K  EL     +
Sbjct: 179 KAVMMLSGGIDSPVASYLAMKRGVEIDMVHFF------SPPYTTEKALAKAKELTGILAN 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+ + + +              +  +I++       +  +    L  A  +    G  
Sbjct: 233 YSGKINFIAVPF----------TEIQEQIKEKLPEGYLMTIQRRFMLQLADRIRAMRGGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+ + +   +   V  P+  + K E  KLA+ IG 
Sbjct: 283 AIFNGESVGQVAS---------QTLESMVAINDVTSTPVLRPVATMDKTEIIKLAEQIGT 333

Query: 190 QDLVNLILEE 199
            DL     E+
Sbjct: 334 FDLSIEPFED 343


>gi|42518879|ref|NP_964809.1| thiamine biosynthesis protein ThiI [Lactobacillus johnsonii NCC
           533]
 gi|81667984|sp|Q74K02|THII_LACJO RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|41583165|gb|AAS08775.1| probable thiamine biosynthesis protein ThiI [Lactobacillus
           johnsonii NCC 533]
          Length = 405

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS      A+ R   ++ + F                  K  EL     +
Sbjct: 179 KAVMMLSGGIDSPVASYLAMKRGVEIDMVHFF------SPPYTTEKALAKAKELTGILAN 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+ + + +              +  +I++       +  +    L  A  +    G  
Sbjct: 233 YSGKINFIAVPF----------TEIQEQIKEKLPEGYLMTIQRRFMLQLADRIRAMRGGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+ + +   +   V  P+  + K E  KLA+ IG 
Sbjct: 283 AIFNGESVGQVAS---------QTLESMVAINDVTSTPVLRPVATMDKTEIIKLAEQIGT 333

Query: 190 QDLVNLILEE 199
            DL     E+
Sbjct: 334 FDLSIEPFED 343


>gi|293567622|ref|ZP_06678966.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecium E1071]
 gi|291589723|gb|EFF21527.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterococcus
           faecium E1071]
          Length = 403

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 62/192 (32%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS     +++ R   +E + F                 +K  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYFSMKRGVEIEAVHF------ASPPYTSEQALQKAKDLTAKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +G  H + +           T+      +           R ++  +       R G
Sbjct: 231 APYVGTIHFIEVPF---------TEIQEEIKKSVPQGYWMTITRRMMLRLTDEIRRIRHG 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +         S          + +++ + +   ++  +  P+  + K E  ++A+ I
Sbjct: 282 LVILNGESLGQVAS----------QTLQSMVAINEVTNTPIIRPVATMDKLEIIEVAEQI 331

Query: 188 GGQDLVNLILEE 199
              +L     E+
Sbjct: 332 DTFNLSIQPFED 343


>gi|257092531|ref|YP_003166172.1| hypothetical protein CAP2UW1_0906 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257045055|gb|ACV34243.1| conserved hypothetical protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 458

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 58/228 (25%), Gaps = 14/228 (6%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           +L LFSGG DS       L        +S      +  E        K   +L  ++  S
Sbjct: 151 SLCLFSGGLDSLIGAINLLQAESAPLLIS------HFGESATSDAQNKLFAKLKKQYARS 204

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
             +   + +     +     ++N                G  +            L   N
Sbjct: 205 AFDRLRVGMTFDDGLVKDVGSENSTRGRSFLFFALGVFAGTGLRNGFTLKVPENGLIALN 264

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           + +       S      H    A    +   +     V  P + + K E          Q
Sbjct: 265 VPLDP-LRLGSNSTRTTHPYFMARWNDLLDELGIDGRVENPYLPMTKGEMVLACA---NQ 320

Query: 191 DLVNLILEESHTCYLGKRDKRYEWG----YGCNSCPACYLRQKGWMEF 234
            L+  +   S +C      +           C  C  C +R+      
Sbjct: 321 KLLLELAPMSLSCAHPANARWQGHKGRGIEHCGYCLPCLIRRAALNRA 368


>gi|322420484|ref|YP_004199707.1| hypothetical protein GM18_2988 [Geobacter sp. M18]
 gi|320126871|gb|ADW14431.1| hypothetical protein GM18_2988 [Geobacter sp. M18]
          Length = 700

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 74/230 (32%), Gaps = 18/230 (7%)

Query: 12  LLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           +++FSGG DS        L+   RV  ++      +K   +     R+    +  K  ++
Sbjct: 157 VVMFSGGLDSLAGAIDEVLNEKHRVVLVT------HKSTPKLNKRHRRLEKMIADKAGEN 210

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                 + +     +++    ++ +            +     +       ++  L +  
Sbjct: 211 APLHIGVRVNKNKGLNYEYTQRSRSFLYVSIGATIAKMINLKSVRFYENGVISLNLPVCA 270

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
            V+G   T  +     R       +  I+L      T+  P +W  K +   +    G Q
Sbjct: 271 QVVGGRATRTTHPRVIRG-----FQEIISLVAGEPFTIENPYIWKTKADVVGVITKAGCQ 325

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
           +++      +HT       +       C +C  C  R+   +  K    D
Sbjct: 326 EMIAASTTCTHT------WEMTNHHTHCGTCSQCIDRRFAVIAAKADQHD 369


>gi|328946180|gb|EGG40325.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK1087]
          Length = 404

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVAIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +    G
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREERG 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             V  P++ + K E  ++A+ I
Sbjct: 281 AQVIINGESLGQVASQTIESMQAINAVTNT---------PVIRPVVTMDKLEIIEIAEKI 331

Query: 188 GGQDLVNLILEE 199
               +     E+
Sbjct: 332 DTFQISIQPFED 343


>gi|320449532|ref|YP_004201628.1| archaeosine biosynthesis protein QueC [Thermus scotoductus SA-01]
 gi|320149701|gb|ADW21079.1| archaeosine biosynthesis protein QueC [Thermus scotoductus SA-01]
          Length = 206

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 73/231 (31%), Gaps = 33/231 (14%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDR-VETLSFDYG-QRNKVELECRLCVRKKIVELMPK 66
             L++ SGG DSS  L     +     +  +  D G    + E      V  ++      
Sbjct: 2   KRLVMLSGGLDSSVLLYKLKKQDGLEGLAAVYLDLGTPPTQKEWRAAEKVASRLGVA--- 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   + +P   LGD   S        +                       +LA ++
Sbjct: 59  -----IYRNRVPHFELGDRLFSPPELAFPGRESIQAGWTDPCTMT-----PITGSLAAKM 108

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G+  + +GV + D++ +P                   + V +  PL  L K E   L  +
Sbjct: 109 GVEEVYLGVIKDDFASHPRLEAYLAL----VKKFLEFNQVRLKMPLSGLTKQEVVALGHE 164

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +G      + LEE+ +C              C +C  C  R++ +     K
Sbjct: 165 LG------VPLEETWSCVASGEAP-------CGACNPCIAREEAFALADAK 202


>gi|91787803|ref|YP_548755.1| ExsB [Polaromonas sp. JS666]
 gi|91697028|gb|ABE43857.1| ExsB [Polaromonas sp. JS666]
          Length = 282

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 70/229 (30%), Gaps = 21/229 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++FSGG DS     WA  +      L+F + QR +        +  K +    +  D
Sbjct: 32  KAIVVFSGGPDSLAAALWAKSKKYDPWLLTFQFKQREQGGEMFASMLLAKTLGFPQEIID 91

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                H              +  +       +   +  +     + +  A T A    I 
Sbjct: 92  FKSPMHSF-------EPTVHVLMHAGTTTTADRAQHHRMEFGAGMVMATACTFAVYHQID 144

Query: 130 NIVIGVCETD-YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
           ++V G  + D + G  +   +   A    ++        +H P     K++       + 
Sbjct: 145 DVVWGATKDDVFGGRFEYSQEFADAFANLVSCTTGRPFRIHVPFASKSKHQV------LA 198

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                  +   S +C       +      C +C AC  R+        K
Sbjct: 199 EFSGKEDLFAMSWSC-------KVGSSIQCGTCTACVARRVAAQASGVK 240


>gi|317153295|ref|YP_004121343.1| hypothetical protein Daes_1584 [Desulfovibrio aespoeensis Aspo-2]
 gi|316943546|gb|ADU62597.1| hypothetical protein Daes_1584 [Desulfovibrio aespoeensis Aspo-2]
          Length = 700

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 74/230 (32%), Gaps = 18/230 (7%)

Query: 12  LLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           +++FSGG DS        L+   +V  ++      +K   +     R+    +  K  ++
Sbjct: 157 VVMFSGGLDSLAGAIDEVLNEKHKVVLVT------HKSTPKLNTRHRRLEKMIADKAGEN 210

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                 + +     +++    ++ +            +     +       ++  L +  
Sbjct: 211 APLHIGVRVNKNKGLNYEYTQRSRSFLYVSIGATIAKMLNLKSVRFYENGVISLNLPVCA 270

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
            V+G   T  +     R       +  I+L      T+  P +W  K    ++    G Q
Sbjct: 271 QVVGGRATRTTHPRVIRG-----FQEIISLVAGEPFTIENPYIWKTKAGVIEVITKAGCQ 325

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
           D++      +HT       +       C +C  C  R+   +  K    D
Sbjct: 326 DMIAASTTCTHT------WEMTNHHTHCGTCSQCIDRRFAMIAAKADQHD 369


>gi|206578238|ref|YP_002237040.1| hypothetical protein KPK_1176 [Klebsiella pneumoniae 342]
 gi|206567296|gb|ACI09072.1| conserved hypothetical protein [Klebsiella pneumoniae 342]
          Length = 421

 Score = 86.5 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 68/226 (30%), Gaps = 25/226 (11%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            + L SGG DS       + +  +   +S    Q    + E +      ++     ++ S
Sbjct: 140 CISLLSGGLDSLIGGIDLVAKGRKPLFVS----QLAHKDSERQRAYASMLMGNGSHYQWS 195

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G                  ++  + + +        +     I L          G+ +
Sbjct: 196 HGISFK-------------GSREPSTRGRSLAFYAFALLASTKINLPKPTIFIPENGVIS 242

Query: 131 I-VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
           I    V     S      H     +   +   +  HV +  P  +  K E  +   D   
Sbjct: 243 INPPLVPGRVSSLSTRTTHPMFIDMLQRVLDNLGIHVQLELPYRFKTKGEMMRECLD--- 299

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           QDL+     +S +C       R      C  C  C +R+  ++ +K
Sbjct: 300 QDLLQKWAADSTSC----GRFRTYNRQHCGRCVPCLIRRAAFIAWK 341


>gi|229578759|ref|YP_002837157.1| ExsB family protein [Sulfolobus islandicus Y.G.57.14]
 gi|228009473|gb|ACP45235.1| ExsB family protein [Sulfolobus islandicus Y.G.57.14]
          Length = 199

 Score = 86.1 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 45/227 (19%), Positives = 82/227 (36%), Gaps = 38/227 (16%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-RNKVELECRLCVRKKIVELMPKWKDS 70
           LLLFS G DSS+   +   +    + L  +YGQ   +++L+    + +K+   +      
Sbjct: 4   LLLFSSGLDSSSVAYYYAKKSLDFDCLFINYGQSSARMQLKYGKIICEKLKRRLIIINAK 63

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
              +  +    L                     P+  +  RN++ +  A   A + G   
Sbjct: 64  NLGEAFVNNDWLR--------------------PHEPIIHRNLVIVPIAIAYAKQNGYER 103

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +++   + D    P+ R      +E    LG    V   TP +   KY   K+    G  
Sbjct: 104 VIMATIKEDCEYEPNRR----DVMEKLKELGEILGVRFETPFVNFPKYLLLKIGIKSG-- 157

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
               L    +++C LG +       Y C  C  C  R + + + K +
Sbjct: 158 ----LDPSLTYSCLLGHK-------YHCGKCSQCLKRIEAFKQAKIR 193


>gi|313669371|ref|YP_004049798.1| hypothetical protein Sulku_2590 [Sulfuricurvum kujiense DSM 16994]
 gi|313156568|gb|ADR35245.1| hypothetical protein Sulku_2590 [Sulfuricurvum kujiense DSM 16994]
          Length = 449

 Score = 86.1 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 68/232 (29%), Gaps = 16/232 (6%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           + L SGG DS       LD   +   +S      + V    +      + E         
Sbjct: 149 ISLLSGGLDSFIGAIDTLDSGQKPLFISHH---NDAVTSSVQNYCLNALKEHFGDDSFYS 205

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
            + H+   + L    +   T++ +       +       R+   +V    L     I   
Sbjct: 206 IKSHVGFSSELFSSGYEDTTRSRSFLFYTLAILAASALPRDRKVIVPENGL-----IALN 260

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V        +      H    A    +   +   V +  P     K +     +D   + 
Sbjct: 261 VPLDTLRLGALSTRTAHPYFIARLNQLAAKLSLDVDIENPYRHQTKGQMIDECKD---KS 317

Query: 192 LVNLILEESHTCYLGKRDKRYEW-GYGCNSCPACYLRQK----GWMEFKEKY 238
            +   + E+ +C   K+ +        C  C  C +R+     G+ + +  Y
Sbjct: 318 FLRAHIAETMSCSDPKKARWQGHSPQHCGYCLPCLIRRASIKHGFGKDETSY 369


>gi|330830835|ref|YP_004393787.1| 7-cyano-7-deazaguanine synthase 2 [Aeromonas veronii B565]
 gi|328805971|gb|AEB51170.1| 7-cyano-7-deazaguanine synthase 2 [Aeromonas veronii B565]
          Length = 131

 Score = 86.1 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 54/121 (44%), Positives = 73/121 (60%), Gaps = 9/121 (7%)

Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
           +FL  +A  AY++G   ++ GVCETD+SGYPDCR + ++A+  A+ LGM+  V   TPLM
Sbjct: 1   MFLTLSAIYAYQVGAEAVITGVCETDFSGYPDCRDEFVKALNLAVVLGMDRPVRFETPLM 60

Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
           WL K ETW LA   G    +  +  ++ TCY G +      G GC  CPAC LR KG  E
Sbjct: 61  WLDKAETWALADHCGH---LETVRRQTLTCYNGIQ------GDGCGECPACILRAKGLEE 111

Query: 234 F 234
           +
Sbjct: 112 Y 112


>gi|227892656|ref|ZP_04010461.1| thiamine-phosphate kinase [Lactobacillus ultunensis DSM 16047]
 gi|227865527|gb|EEJ72948.1| thiamine-phosphate kinase [Lactobacillus ultunensis DSM 16047]
          Length = 405

 Score = 86.1 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 59/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS      AL R   +E + F                  K  EL     +
Sbjct: 179 KAVMMLSGGIDSPVASWLALKRGVDIEMVHFF------SPPYTTEKALAKAKELTGILAN 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+ + + +              +   I++       +  +    L  A  +    G  
Sbjct: 233 YAGKINFIAVPFA----------EIQETIKEKLPEGYLMTVQRRFMLQLADRIRKMRGGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +++ + +   +   V  P+  + K E    A+ IG 
Sbjct: 283 AIFNGESVGQVAS---------QTLQSMVAINDVTTTPVIRPVATMDKTEIIAKAEKIGT 333

Query: 190 QDLVNLILEE 199
            DL     E+
Sbjct: 334 FDLSIKPFED 343


>gi|148984615|ref|ZP_01817883.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae
           SP3-BS71]
 gi|147923006|gb|EDK74121.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae
           SP3-BS71]
 gi|301799872|emb|CBW32447.1| putative thiamine biosynthesis protein [Streptococcus pneumoniae
           OXC141]
          Length = 404

 Score = 86.1 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREVRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             +  P++ + K E   +AQ+I
Sbjct: 281 GFVIINGESLGQVASQTLESMKAINAVTNT---------PIIRPVVTMDKLEIIDIAQEI 331

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 332 DTFDISIQPFED 343


>gi|306833773|ref|ZP_07466899.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           bovis ATCC 700338]
 gi|304424110|gb|EFM27250.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           bovis ATCC 700338]
          Length = 362

 Score = 86.1 bits (211), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 60/207 (28%), Gaps = 25/207 (12%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +L+ SGG DS      AL R   +E + F                 KK  +L  K     
Sbjct: 181 MLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKLTKFG 234

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G    + +           T+      +           R  +  +       R G+  I
Sbjct: 235 GNIDFIEVPF---------TEIQEEIKEKAPEAYLMTLTRRFMMRITDLIREERNGLVII 285

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
                    S          + +E+   +   +   +  P++ + K E   +AQ I   D
Sbjct: 286 NGESLGQVAS----------QTLESMRAINAVTATPIIRPVVTMDKLEIIDIAQKIDTFD 335

Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGC 218
           +     E+  T +   R K       C
Sbjct: 336 ISIQPFEDCCTIFAPDRPKTNPKIKKC 362


>gi|150016195|ref|YP_001308449.1| thiamine biosynthesis protein ThiI [Clostridium beijerinckii NCIMB
           8052]
 gi|149902660|gb|ABR33493.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           beijerinckii NCIMB 8052]
          Length = 385

 Score = 86.1 bits (211), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 57/193 (29%), Gaps = 25/193 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              S +L+ SGG DS         R   V  + +                + K+ +L   
Sbjct: 174 MNGSTMLMLSGGIDSPVAGYMMAKRGVEVSCVYYH------SHPYTSERAKDKVKDLAKI 227

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + ++  +             ++ M+I +    +          +  A  LA + 
Sbjct: 228 LAQYTEKINLYIVPF----------TDIQMEIINKCREDELTIIMRRFMMRIACRLADKY 277

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI ++  G      +                      +      PL+ + K +  ++A+ 
Sbjct: 278 GINSVSTGESIGQVASQTMDGLIVSD---------NCADRPAFRPLIAMDKTDIMEIARK 328

Query: 187 IGGQDLVNLILEE 199
           IG  +   L  E+
Sbjct: 329 IGTYETSILPYED 341


>gi|116493041|ref|YP_804776.1| thiamine biosynthesis protein ThiI [Pediococcus pentosaceus ATCC
           25745]
 gi|122265495|sp|Q03EN8|THII_PEDPA RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|116103191|gb|ABJ68334.1| Thiamine biosynthesis ATP pyrophosphatase [Pediococcus pentosaceus
           ATCC 25745]
          Length = 405

 Score = 86.1 bits (211), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 57/190 (30%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +++ SGG DS       + R   +E + F                  K  EL  K   
Sbjct: 179 KGMMMLSGGIDSPVAGYLGMKRGVEMEMVHFF------SPPYTSEQALAKAKELSGKLAA 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G    + +              +   I++       +  +  + L     LA + G  
Sbjct: 233 YSGSVQFIQVPF----------TEIQETIKEKCPEGYLMTIQRRMMLRLVVALAKQRGGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +                + +   + + +  P++ + K E   +A+DI  
Sbjct: 283 AIFNGESLGQVASQTMESM---------LAINDVTTMPIIRPVVSMDKNEIIDIAKDIDT 333

Query: 190 QDLVNLILEE 199
            DL  +  E+
Sbjct: 334 YDLSIMPFED 343


>gi|57640303|ref|YP_182781.1| thiamine biosynthesis protein ThiI [Thermococcus kodakarensis KOD1]
 gi|84028851|sp|Q5JCY1|THII_PYRKO RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|57158627|dbj|BAD84557.1| Thiamine biosynthesis protein ThiI [Thermococcus kodakarensis KOD1]
          Length = 381

 Score = 86.1 bits (211), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 63/187 (33%), Gaps = 24/187 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L SGG DS       + R   V  +    G++        L   +KI   + K+  
Sbjct: 182 KVVALLSGGIDSPVAAFLMMKRGVEVIPVHIYMGEKT-------LEKVRKIWNQLKKYHY 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
               + I+              + +  KI++             + +  A  +A   G  
Sbjct: 235 GGKAELIVVKPQ--------NREEMLKKIKELGKEKYTCVLCKFMMVKHADRIAKEFGAK 286

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV+G      +          + +E    +   S + ++ PL+ L K E   +A+ IG 
Sbjct: 287 GIVMGDSLGQVAS---------QTLENMYIVSQASDLPIYRPLIGLDKEEIVDIAKKIGT 337

Query: 190 QDLVNLI 196
            +L  L 
Sbjct: 338 FELSTLP 344


>gi|224543752|ref|ZP_03684291.1| hypothetical protein CATMIT_02968 [Catenibacterium mitsuokai DSM
           15897]
 gi|224523320|gb|EEF92425.1| hypothetical protein CATMIT_02968 [Catenibacterium mitsuokai DSM
           15897]
          Length = 398

 Score = 86.1 bits (211), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 64/190 (33%), Gaps = 24/190 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            ALL+ SGG DS       + R   +E + +                R+K+++L+   KD
Sbjct: 178 KALLMLSGGIDSPVAGYLTMKRGVDLECIHY------ASPPYTNELAREKVLDLVNVLKD 231

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                  + +    ++  S           D+   +  +     +    A  +A +    
Sbjct: 232 YTHGSIKVHIVPFTELQLSVY---------DHCDESYAMTVMRRMMYRIAEGVAKKNDCL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + +E+   +       V  P+  + K E  K+A+ IG 
Sbjct: 283 AIVNGESIGQVAS---------QTLESMNTINQVITTPVIRPVACMDKLEIIKIAEKIGT 333

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 334 YDISIRPYED 343


>gi|184154966|ref|YP_001843306.1| thiamine biosynthesis protein ThiI [Lactobacillus fermentum IFO
           3956]
 gi|227514505|ref|ZP_03944554.1| thiamine-phosphate kinase [Lactobacillus fermentum ATCC 14931]
 gi|238692952|sp|B2GAZ4|THII_LACF3 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|183226310|dbj|BAG26826.1| thiamine biosynthesis protein ThiI [Lactobacillus fermentum IFO
           3956]
 gi|227087132|gb|EEI22444.1| thiamine-phosphate kinase [Lactobacillus fermentum ATCC 14931]
 gi|299782984|gb|ADJ40982.1| Probable thiamine biosynthesis protein thiI [Lactobacillus
           fermentum CECT 5716]
          Length = 406

 Score = 86.1 bits (211), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 58/190 (30%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +++ SGG DS      AL R   +E + F                  K  EL  K   
Sbjct: 180 KGMMMLSGGIDSPVAAYLALKRGVSLEMVHFY------SPPYTSEQALAKAKELTGKLAK 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G    + +              +   +++       +  +  + L  A  LA +    
Sbjct: 234 YSGSIKFIQVPF----------TEIQETVKEKVPEGYLMTVQRRLMLRLACALAQKRAGL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +  G      +                + +   + + V  P++   K E  K+A+DI  
Sbjct: 284 AVFNGESLGQVASQTMESM---------LAIEDVTTMPVLRPVLSYDKNEIIKIAEDIDT 334

Query: 190 QDLVNLILEE 199
            DL  L  E+
Sbjct: 335 YDLSILPYED 344


>gi|168214426|ref|ZP_02640051.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           perfringens CPE str. F4969]
 gi|170714092|gb|EDT26274.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           perfringens CPE str. F4969]
          Length = 385

 Score = 86.1 bits (211), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 56/193 (29%), Gaps = 25/193 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              S +++ SGG DS         R      + +                + K+ EL   
Sbjct: 173 MNGSTMVMLSGGIDSPVAAYLMARRGVETHCVYYH------SHPYTSERAKDKVKELAKI 226

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 +  +  +              + M I +    +          +  A  LA R 
Sbjct: 227 VGRYTEKITLYVVPF----------TEIQMDIIEKCREDELTIIMRRFMMRVACELAERK 276

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I +I  G      +          + +E  I     S   V  PL+ + K +   +A+D
Sbjct: 277 KIQSITTGESIGQVAS---------QTMEGLIVSNDVSDRPVFRPLIAMDKEDIMDIARD 327

Query: 187 IGGQDLVNLILEE 199
           I   +   L  E+
Sbjct: 328 IDTYETSILPYED 340


>gi|116629858|ref|YP_815030.1| thiamine biosynthesis ATP pyrophosphatase [Lactobacillus gasseri
           ATCC 33323]
 gi|238853949|ref|ZP_04644306.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           gasseri 202-4]
 gi|282851628|ref|ZP_06260993.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           gasseri 224-1]
 gi|311110504|ref|ZP_07711901.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           gasseri MV-22]
 gi|122273204|sp|Q042N0|THII_LACGA RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|116095440|gb|ABJ60592.1| Thiamine biosynthesis ATP pyrophosphatase [Lactobacillus gasseri
           ATCC 33323]
 gi|238833394|gb|EEQ25674.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           gasseri 202-4]
 gi|282557596|gb|EFB63193.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           gasseri 224-1]
 gi|311065658|gb|EFQ45998.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           gasseri MV-22]
          Length = 405

 Score = 86.1 bits (211), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 63/190 (33%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS      A+ R   ++ + F                  K  EL     +
Sbjct: 179 RAVMMLSGGIDSPVASYLAMKRGVEIDMVHFF------SPPYTTEKALAKAKELTGILAN 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+ + + +              +  +I++       +  +    L  A  +  + G  
Sbjct: 233 YSGKINFIAVPF----------TEIQEQIKEKLPEGYLMTIQRRFMLQLADRIRAKRGGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+ + +   +   V  P+  + K E  KLA+ IG 
Sbjct: 283 AIFNGESVGQVAS---------QTLESMVAINDVTSTPVLRPVATMDKTEIIKLAEQIGT 333

Query: 190 QDLVNLILEE 199
            DL     E+
Sbjct: 334 FDLSIEPFED 343


>gi|327469449|gb|EGF14918.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK330]
          Length = 404

 Score = 86.1 bits (211), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGSLKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +    G
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREERG 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             V  P++ + K E  ++A+ I
Sbjct: 281 AQVIINGESLGQVASQTIESMQAINAVTNT---------PVIRPVVTMDKLEIIEIAEKI 331

Query: 188 GGQDLVNLILEE 199
               +     E+
Sbjct: 332 DTFQISIQPFED 343


>gi|324993019|gb|EGC24939.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK405]
 gi|324995672|gb|EGC27584.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK678]
 gi|327461287|gb|EGF07618.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK1]
 gi|327489146|gb|EGF20939.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK1058]
          Length = 404

 Score = 86.1 bits (211), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGSLKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +    G
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREERG 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             V  P++ + K E  ++A+ I
Sbjct: 281 AQVIINGESLGQVASQTIESMQAINAVTNT---------PVIRPVVTMDKLEIIEIAEKI 331

Query: 188 GGQDLVNLILEE 199
               +     E+
Sbjct: 332 DTFQISIQPFED 343


>gi|46199747|ref|YP_005414.1| thiamine biosynthesis protein thiI [Thermus thermophilus HB27]
 gi|55981765|ref|YP_145062.1| thiamine biosynthesis protein ThiI [Thermus thermophilus HB8]
 gi|81363769|sp|Q5SHD4|THII_THET8 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|81405503|sp|Q72HP1|THII_THET2 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|46197373|gb|AAS81787.1| thiamine biosynthesis protein thiI [Thermus thermophilus HB27]
 gi|55773178|dbj|BAD71619.1| probable thiamine biosynthesis protein ThiI [Thermus thermophilus
           HB8]
          Length = 406

 Score = 86.1 bits (211), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 51/190 (26%), Gaps = 27/190 (14%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPK 66
           +   + L SGG DS       + R   V  + F  +   +    E    + +++     +
Sbjct: 174 SGRVVALLSGGIDSPVAAYRLMRRGAEVVLVHFHPFPLLSGASREKAKALAERLARFQHR 233

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +  L                      V   I         V       L  A  +A   
Sbjct: 234 LRLHLVPF-----------------SEVQRHIIVEAPTAYRVVLYRRYMLRIAEAIAREE 276

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   +  G      +          + +E    +   + + V  PL+   K E    AQ 
Sbjct: 277 GALALCTGDSLGQVAS---------QTLENLHAVNQAATLPVFRPLIGWDKEEIVAEAQR 327

Query: 187 IGGQDLVNLI 196
           IG      L 
Sbjct: 328 IGTYATSILP 337


>gi|323488438|ref|ZP_08093685.1| thiamine biosynthesis protein [Planococcus donghaensis MPA1U2]
 gi|323397945|gb|EGA90744.1| thiamine biosynthesis protein [Planococcus donghaensis MPA1U2]
          Length = 400

 Score = 86.1 bits (211), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 61/192 (31%), Gaps = 29/192 (15%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            ALL+ SGG DS       L R  R++ + F                ++K+ +L  +   
Sbjct: 180 KALLMLSGGLDSPVAGYHMLKRGVRLDLIHFF------SPPFTNDRAKEKVFDLAERLSQ 233

Query: 70  SL--GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                + H++P   L    H  +  N+                R ++  V    LA    
Sbjct: 234 FGSSVKLHVIPFTKLQQEVHKQVPDNIT-----------MTSTRRMMMRVADLVLAET-N 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+             V  PL+ + K E   +AQ I
Sbjct: 282 CRAIVTGESLGQVASQTLESMQAINAVTNT---------PVLRPLIAMDKLEIIDIAQQI 332

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 333 ETYDISIRPFED 344


>gi|222055806|ref|YP_002538168.1| ExsB family protein [Geobacter sp. FRC-32]
 gi|221565095|gb|ACM21067.1| ExsB family protein [Geobacter sp. FRC-32]
          Length = 196

 Score = 86.1 bits (211), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 55/217 (25%), Positives = 85/217 (39%), Gaps = 32/217 (14%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           + L SGG DS+     A +       L  DYGQR + +                  +  L
Sbjct: 4   VTLVSGGLDSTLIAKLAQEEGLIQHPLFVDYGQRARDQELAACR--------RGMSELGL 55

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
            E  +  L+  G + HS LT +    ++D      F PGRN++FL+ AA  A ++    I
Sbjct: 56  PEPRVADLSGFGALIHSGLTDSSLDIVKD-----AFTPGRNMLFLLIAAAYAVQVKADAI 110

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA--QDIGG 189
            IG+     S +PD     +R  E  I   M   + +  PL    K +   LA  + IG 
Sbjct: 111 SIGLLHESTSLFPDQTSAFLRDAEVLIRRCMNRDIKLLAPLASFLKTDVVALAKLKRIGA 170

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYL 226
                     +++C+ G  +        C +C AC  
Sbjct: 171 ----------TYSCHTGNEET-------CGTCIACRE 190


>gi|302875322|ref|YP_003843955.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           cellulovorans 743B]
 gi|307688175|ref|ZP_07630621.1| thiamine biosynthesis protein ThiI [Clostridium cellulovorans 743B]
 gi|302578179|gb|ADL52191.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           cellulovorans 743B]
          Length = 386

 Score = 86.1 bits (211), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 62/192 (32%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             S +L+ SGG DS         R   V ++ F                ++K+++L    
Sbjct: 171 NGSTMLMLSGGIDSPVAGYLMARRGTEVSSVYFH------SHPYTSERAKEKVIDLAKIL 224

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  +              + MKI +    +          +  + TLA R  
Sbjct: 225 ASYTGQMKLYIVPF----------TEIQMKIMELCPEDELTIIMRRFMMRVSCTLAERNK 274

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I ++         S          + +E  I     +   V  PL+ + K +   +++ +
Sbjct: 275 IQSV---------STGESIGQVASQTMEGLIVSTDVADRPVFRPLIAMDKEDIMDISRKV 325

Query: 188 GGQDLVNLILEE 199
           G  D   L  E+
Sbjct: 326 GTYDTSILPYED 337


>gi|291519251|emb|CBK74472.1| thiazole biosynthesis/tRNA modification protein ThiI [Butyrivibrio
           fibrisolvens 16/4]
          Length = 393

 Score = 86.1 bits (211), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 52/190 (27%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+LL SGG DS         R   +    F                ++K+V+L      
Sbjct: 182 KAMLLLSGGIDSPVAGYMISKRGVSLSATYFH------APPYTSEQAKQKVVDLAKLVAK 235

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G   +  +             ++ + I                 +  A   A      
Sbjct: 236 YSGPIDLHIVNF----------TDIQLYIYQQCAHEELTIIMRRYMMRIAEHFAKENDCL 285

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      +       +   A+           + V+ PL+   K +   +++ I  
Sbjct: 286 GLVTGESIGQVASQTMQSLNCTNAV---------CSLPVYRPLIAFDKQDIVDISEKIDT 336

Query: 190 QDLVNLILEE 199
            +   L  E+
Sbjct: 337 YETSILPYED 346


>gi|313901023|ref|ZP_07834511.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           sp. HGF2]
 gi|312953981|gb|EFR35661.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           sp. HGF2]
          Length = 402

 Score = 85.7 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 56/190 (29%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL++ SGG DS       + R   +E + +                + K++EL  +   
Sbjct: 183 KALVMLSGGIDSPVASYLTMKRGVAIECVHY------ASPPYTSQAAQDKVLELARQLAP 236

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G   +  +             ++ + I  N   +  +     +    A  L  +    
Sbjct: 237 YQGHIRVHVVPF----------TDLQLAIYKNCDESYAITIMRRMMYRIAQRLCEQQHCL 286

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +                  +   +   V  P+  + K E   +++ I  
Sbjct: 287 AIVNGESIGQVASQTLESMQ---------TINCVTTTPVIRPVACMDKVEIINVSRAIDT 337

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 338 YDISIQPFED 347


>gi|257439138|ref|ZP_05614893.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Faecalibacterium prausnitzii A2-165]
 gi|257198389|gb|EEU96673.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Faecalibacterium prausnitzii A2-165]
          Length = 399

 Score = 85.7 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 57/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  AL + SGG DS         R   ++ + F                + K+  L  K 
Sbjct: 178 SGRALNMLSGGIDSPVAAYRMAKRGLALDHIHF------ASPPYTSERAKLKVKALAQKI 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G  ++  +                  I+DN     F        +  A  +A R G
Sbjct: 232 TPYTGSSNLFVVPY----------TKPQEYIRDNAPDVLFTVLMRRSMMRIANRIATRQG 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +           A +          + +  PL+ + K E  + ++ I
Sbjct: 282 CEALITGESLAQVASQTVKALQCTDAAQD---------LPILRPLIGMDKTEIIETSRHI 332

Query: 188 GGQDLVNLILEE 199
           G  +   L  E+
Sbjct: 333 GTYETSILPYED 344


>gi|332361365|gb|EGJ39169.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK1056]
          Length = 404

 Score = 85.7 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 52/192 (27%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREERS 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             +  P++ + K E   +A+ I
Sbjct: 281 AQVIINGESLGQVASQTIESMQAINAVTNT---------PIIRPVVTMDKLEIIDIAEKI 331

Query: 188 GGQDLVNLILEE 199
               +     E+
Sbjct: 332 DTFQISIQPFED 343


>gi|325696671|gb|EGD38560.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK160]
          Length = 404

 Score = 85.7 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 52/192 (27%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREERS 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             +  P++ + K E   +A+ I
Sbjct: 281 AQVIINGESLGQVASQTIESMQAINAVTNT---------PIIRPVVTMDKLEIIDIAEKI 331

Query: 188 GGQDLVNLILEE 199
               +     E+
Sbjct: 332 DTFQISIQPFED 343


>gi|324990777|gb|EGC22712.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK353]
          Length = 404

 Score = 85.7 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 52/192 (27%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREERS 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             +  P++ + K E   +A+ I
Sbjct: 281 AQVIINGESLGQVASQTIESMQAINAVTNT---------PIIRPVVTMDKLEIIDIAEKI 331

Query: 188 GGQDLVNLILEE 199
               +     E+
Sbjct: 332 DTFQISIQPFED 343


>gi|329769610|ref|ZP_08261014.1| thiamine biosynthesis/tRNA modification protein ThiI [Gemella
           sanguinis M325]
 gi|328838365|gb|EGF87974.1| thiamine biosynthesis/tRNA modification protein ThiI [Gemella
           sanguinis M325]
          Length = 413

 Score = 85.7 bits (210), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 71/195 (36%), Gaps = 25/195 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +  +  ALLL SGG DS         +   VE + F      +          +KI +L 
Sbjct: 175 VNTSSKALLLLSGGIDSPVAAHALQVKGVEVEMIHF------QSPPFTSQEALQKIFDLT 228

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            K  + +G+  +  +              +  +I      N  +       L  A  +AY
Sbjct: 229 IKLSEVVGKIKLHVVNF----------TKLQTEIVKRIPSNYTMTSTRRFMLRIAEEVAY 278

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           + G   I  G      +          + +E+   +   +++ V  PL+ + K +  K+A
Sbjct: 279 KEGCLAIATGESLGQVAS---------QTLESMNCINEVTNLPVLRPLLTMDKVDIIKIA 329

Query: 185 QDIGGQDLVNLILEE 199
           QDI   ++ NL  E+
Sbjct: 330 QDIDTLEISNLPFED 344


>gi|168206318|ref|ZP_02632323.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           perfringens E str. JGS1987]
 gi|170662185|gb|EDT14868.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           perfringens E str. JGS1987]
          Length = 385

 Score = 85.7 bits (210), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 52/193 (26%), Gaps = 25/193 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              S +++ SGG DS         R      + +                + K+ EL   
Sbjct: 173 MNGSTMVMLSGGIDSPVAAYLMARRGVETHCVYYH------SHPYTSERAKDKVKELAKI 226

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 +  +  +              + M I +    +          +  A  LA R 
Sbjct: 227 VGRYTEKITLYVVPF----------TEIQMDIIEKCREDELTIIMRRFMMRVACELAERK 276

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I +I  G      +            +             V  PL+ + K +   +A+D
Sbjct: 277 KIQSITTGESIGQVASQTMEGLMVSNDVSDR---------PVFRPLIAMDKEDIMDIARD 327

Query: 187 IGGQDLVNLILEE 199
           I   +   L  E+
Sbjct: 328 IDTYETSILPYED 340


>gi|257457548|ref|ZP_05622715.1| thiamine biosynthesis/tRNA modification protein ThiI [Treponema
           vincentii ATCC 35580]
 gi|257444934|gb|EEV20010.1| thiamine biosynthesis/tRNA modification protein ThiI [Treponema
           vincentii ATCC 35580]
          Length = 391

 Score = 85.7 bits (210), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 58/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  ALLL SGG DS       L R  +V+ + F                ++K+  L    
Sbjct: 176 SGRALLLLSGGIDSPVAGYKMLFRGMKVDYVYFH------SHPYTSPEAQRKVETLAGIL 229

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                         LG          V   ++             +  +  A  LA ++ 
Sbjct: 230 ARY----------GLGGYLTVVSFTKVQQHLKRTVPEPYLTLLLRMCMMHTAEMLAEKIN 279

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +          + IE        + + +  PL+ + K E  + A DI
Sbjct: 280 AQCLVTGESLAQVAS---------QTIENLTVTDGCAKLPILRPLIGMDKEEIIRYAVDI 330

Query: 188 GGQDLVNLILEE 199
           G      L  E+
Sbjct: 331 GTYQTSILPYED 342


>gi|222099855|ref|YP_002534423.1| thiamine biosynthesis protein thiI [Thermotoga neapolitana DSM
           4359]
 gi|221572246|gb|ACM23058.1| thiamine biosynthesis protein thiI [Thermotoga neapolitana DSM
           4359]
          Length = 428

 Score = 85.7 bits (210), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 66/194 (34%), Gaps = 25/194 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+LL SGG DS     +AL R   +E+++F                 +K+ +++   ++
Sbjct: 216 RAILLLSGGIDSPVAGWYALKRGVLIESVTF------VSPPFTSEGAVEKVKDILRVLRE 269

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G   +          H      V ++I+ +      +          A  +A  +   
Sbjct: 270 FSGGHPL--------RLHVVNLTQVQLRIKKSVPDKYSLLMYRRSMFRIAEKIAEEVNAI 321

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
               G      +          + +E   ++   +   V  PL    K E  + A++IG 
Sbjct: 322 AFYTGENVGQVAS---------QTLENLWSIESVTTRPVIRPLAGFDKTEIVEKAREIGT 372

Query: 190 QDLVNLILEESHTC 203
            ++     ++  +C
Sbjct: 373 YEISIKPYQD--SC 384


>gi|322517352|ref|ZP_08070227.1| thiamine biosynthesis protein ThiI [Streptococcus vestibularis ATCC
           49124]
 gi|322124049|gb|EFX95602.1| thiamine biosynthesis protein ThiI [Streptococcus vestibularis ATCC
           49124]
          Length = 407

 Score = 85.7 bits (210), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +L+ SGG DS      AL R   +E + F                 KK  +L  K   
Sbjct: 181 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKLTK 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G    + +           T+      +           R  +  +       R G+ 
Sbjct: 235 FGGNIQFIEVPF---------TEIQEEIKEKAPEAYLMTLTRRFMMRITDRIREERRGLV 285

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I         S          + +E+   +   +   V  P++ + K E   LAQ I  
Sbjct: 286 IINGESLGQVAS----------QTMESMQAINAVTCTPVIRPVVTMDKLEIIDLAQKIDT 335

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 336 FDISIQPFED 345


>gi|322372325|ref|ZP_08046861.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           sp. C150]
 gi|321277367|gb|EFX54436.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           sp. C150]
          Length = 407

 Score = 85.7 bits (210), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +L+ SGG DS      AL R   +E + F                 KK  +L  K   
Sbjct: 181 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKLTK 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G    + +           T+      +           R  +  +       R G+ 
Sbjct: 235 FGGNIQFIEVPF---------TEIQEEIKEKAPEAYLMTLTRRFMMRITDRIREERRGLV 285

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I         S          + +E+   +   +   V  P++ + K E   LAQ I  
Sbjct: 286 IINGESLGQVAS----------QTMESMQAINAVTCTPVIRPVVTMDKLEIIDLAQKIDT 335

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 336 FDISIQPFED 345


>gi|312864260|ref|ZP_07724494.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           vestibularis F0396]
 gi|311100261|gb|EFQ58470.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           vestibularis F0396]
          Length = 407

 Score = 85.7 bits (210), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +L+ SGG DS      AL R   +E + F                 KK  +L  K   
Sbjct: 181 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKLTK 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G    + +           T+      +           R  +  +       R G+ 
Sbjct: 235 FGGNIQFIEVPF---------TEIQEEIKEKAPEAYLMTLTRRFMMRITDRIREERRGLV 285

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I         S          + +E+   +   +   V  P++ + K E   LAQ I  
Sbjct: 286 IINGESLGQVAS----------QTMESMQAINAVTCTPVIRPVVTMDKLEIIDLAQKIDT 335

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 336 FDISIQPFED 345


>gi|307704657|ref|ZP_07641557.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           mitis SK597]
 gi|307621766|gb|EFO00803.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           mitis SK597]
          Length = 404

 Score = 85.7 bits (210), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREVRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             +  P++ + K E   +AQ+I
Sbjct: 281 GLVIINGESLGQVASQTLESMQAINAVTNT---------PIIRPVVTMDKLEIIDIAQEI 331

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 332 DTFDISIQPFED 343


>gi|322376896|ref|ZP_08051389.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           sp. M334]
 gi|321282703|gb|EFX59710.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           sp. M334]
          Length = 404

 Score = 85.7 bits (210), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 56/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREVRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +        TI A+ +           V  P++ + K E   +AQ I
Sbjct: 281 GLVIINGESLGQVASQTLESMQTINAVTST---------PVIRPVVTMDKLEIIDIAQAI 331

Query: 188 GGQDLVNLILEE 199
           G  D+     E+
Sbjct: 332 GTFDISIQPFED 343


>gi|284998063|ref|YP_003419830.1| ExsB family protein [Sulfolobus islandicus L.D.8.5]
 gi|284445958|gb|ADB87460.1| ExsB family protein [Sulfolobus islandicus L.D.8.5]
          Length = 244

 Score = 85.7 bits (210), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 64/231 (27%), Gaps = 45/231 (19%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++  +GG DS+    +  D++  +      YG   ++         + + EL  K
Sbjct: 1   MVEEAIIQLTGGIDSTVLAYYLKDKYV-LHGTFIYYGYPPQLRE------LELVKELSRK 53

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                    I+  +            ++   I+   +            L          
Sbjct: 54  LD---IPLKIIDFSSYIKSFDLPPIDSIQYIIKYQFVIEILASFSAYPNLNTMLV----- 105

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                               + +    +     +       V  P   + K E  KL  +
Sbjct: 106 -----------------GWLKDEWSNKMSILKGIESLMGFKVIAPFHAMVKSEVIKLGNE 148

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +G      +   ++H+C +  +         C  C  C  R++ + E K K
Sbjct: 149 LG------VDFTKTHSCIVSGK-------MHCGICMPCRSRRRAFEEAKVK 186


>gi|58337101|ref|YP_193686.1| thiamine biosynthesis protein ThiI [Lactobacillus acidophilus NCFM]
 gi|227903673|ref|ZP_04021478.1| thiamine-phosphate kinase [Lactobacillus acidophilus ATCC 4796]
 gi|75357802|sp|Q5FKW9|THII_LACAC RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|58254418|gb|AAV42655.1| thiazole biosynthesis protein [Lactobacillus acidophilus NCFM]
 gi|227868560|gb|EEJ75981.1| thiamine-phosphate kinase [Lactobacillus acidophilus ATCC 4796]
          Length = 405

 Score = 85.7 bits (210), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 60/190 (31%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS      AL R   +E + F                  K  EL     +
Sbjct: 179 KAVMMLSGGIDSPVASWLALKRGVDIEMVHFF------SPPYTTEKALAKAKELTGILAN 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+ + + +              +   I++       +  +    L  A  +    G  
Sbjct: 233 YAGKINFIAVPFA----------EIQETIKEKLPEGYLMTVQRRFMLQLADRIRAMRGGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+ + +   +   V  P+  + K E    A++IG 
Sbjct: 283 AIFNGESVGQVAS---------QTLESMVAINDVTTTPVIRPVATMDKTEIIAKAEEIGT 333

Query: 190 QDLVNLILEE 199
            DL     E+
Sbjct: 334 FDLSIQPFED 343


>gi|303269386|ref|ZP_07355157.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae BS458]
 gi|302641104|gb|EFL71480.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae BS458]
          Length = 393

 Score = 85.4 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREVRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             +  P++ + K E   +AQ+I
Sbjct: 281 GLVIINGESLGQVASQTLESMKAINAVTNT---------PIIRPVVTMDKLEIIDIAQEI 331

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 332 DTFDISIQPFED 343


>gi|225858680|ref|YP_002740190.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae 70585]
 gi|254784232|sp|C1C6L4|THII_STRP7 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|225721635|gb|ACO17489.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae 70585]
          Length = 404

 Score = 85.4 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREVRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             +  P++ + K E   +AQ+I
Sbjct: 281 GLVIINGESLGQVASQTLESMKAINAVTNT---------PIIRPVVTMDKLEIIDIAQEI 331

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 332 DTFDISIQPFED 343


>gi|169832816|ref|YP_001694334.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae
           Hungary19A-6]
 gi|238688286|sp|B1IB49|THII_STRPI RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|168995318|gb|ACA35930.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae Hungary19A-6]
          Length = 404

 Score = 85.4 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREVRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             +  P++ + K E   +AQ+I
Sbjct: 281 GLVIINGESLGQVASQTLESMKAINAVTNT---------PIIRPVVTMDKLEIIDIAQEI 331

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 332 DTFDISIQPFED 343


>gi|149002419|ref|ZP_01827353.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae
           SP14-BS69]
 gi|237650536|ref|ZP_04524788.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae CCRI
           1974]
 gi|237822619|ref|ZP_04598464.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae CCRI
           1974M2]
 gi|147759356|gb|EDK66348.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae
           SP14-BS69]
          Length = 404

 Score = 85.4 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREVRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             +  P++ + K E   +AQ+I
Sbjct: 281 GLVIINGESLGQVASQTLESMKAINAVTNT---------PIIRPVVTMDKLEIIDIAQEI 331

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 332 DTFDISIQPFED 343


>gi|148993695|ref|ZP_01823142.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae SP9-BS68]
 gi|148997036|ref|ZP_01824690.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae SP11-BS70]
 gi|149007172|ref|ZP_01830836.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae SP18-BS74]
 gi|149026363|ref|ZP_01836518.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae SP23-BS72]
 gi|168490316|ref|ZP_02714515.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae SP195]
 gi|168490974|ref|ZP_02715117.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae CDC0288-04]
 gi|168493036|ref|ZP_02717179.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae CDC3059-06]
 gi|168575542|ref|ZP_02721478.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae MLV-016]
 gi|221231659|ref|YP_002510811.1| thiamine biosynthesis protein [Streptococcus pneumoniae ATCC
           700669]
 gi|225854389|ref|YP_002735901.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae JJA]
 gi|225856546|ref|YP_002738057.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae P1031]
 gi|307067483|ref|YP_003876449.1| thiamine biosynthesis ATP pyrophosphatase [Streptococcus pneumoniae
           AP200]
 gi|254784233|sp|B8ZNS6|THII_STRPJ RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|254784235|sp|C1CDN0|THII_STRZJ RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|254784239|sp|C1CJW9|THII_STRZP RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|147756736|gb|EDK63776.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae SP11-BS70]
 gi|147761210|gb|EDK68177.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae SP18-BS74]
 gi|147927775|gb|EDK78798.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae SP9-BS68]
 gi|147929325|gb|EDK80324.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae SP23-BS72]
 gi|183571358|gb|EDT91886.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae SP195]
 gi|183574697|gb|EDT95225.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae CDC0288-04]
 gi|183576929|gb|EDT97457.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae CDC3059-06]
 gi|183578625|gb|EDT99153.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae MLV-016]
 gi|220674119|emb|CAR68638.1| putative thiamine biosynthesis protein [Streptococcus pneumoniae
           ATCC 700669]
 gi|225723698|gb|ACO19551.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae JJA]
 gi|225725088|gb|ACO20940.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae P1031]
 gi|306409020|gb|ADM84447.1| Thiamine biosynthesis ATP pyrophosphatase [Streptococcus pneumoniae
           AP200]
 gi|332073212|gb|EGI83691.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae GA17570]
          Length = 404

 Score = 85.4 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREVRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             +  P++ + K E   +AQ+I
Sbjct: 281 GLVIINGESLGQVASQTLESMKAINAVTNT---------PIIRPVVTMDKLEIIDIAQEI 331

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 332 DTFDISIQPFED 343


>gi|149010486|ref|ZP_01831857.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae SP19-BS75]
 gi|307127568|ref|YP_003879599.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae 670-6B]
 gi|147764967|gb|EDK71896.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae SP19-BS75]
 gi|306484630|gb|ADM91499.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae 670-6B]
 gi|332077295|gb|EGI87757.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae GA17545]
          Length = 404

 Score = 85.4 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREVRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             +  P++ + K E   +AQ+I
Sbjct: 281 GLVIINGESLGQVASQTLESMKAINAVTNT---------PIIRPVVTMDKLEIIDIAQEI 331

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 332 DTFDISIQPFED 343


>gi|15902828|ref|NP_358378.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae R6]
 gi|116516659|ref|YP_816262.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae D39]
 gi|32171826|sp|Q8DQ92|THII_STRR6 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|122278852|sp|Q04L36|THII_STRP2 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|15458381|gb|AAK99588.1| Thiamin biosynthesis protein [Streptococcus pneumoniae R6]
 gi|116077235|gb|ABJ54955.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae D39]
          Length = 404

 Score = 85.4 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREVRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             +  P++ + K E   +AQ+I
Sbjct: 281 GLVIINGESLGQVASQTLESMKAINAVTNT---------PIIRPVVTMDKLEIIDIAQEI 331

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 332 DTFDISIQPFED 343


>gi|15900764|ref|NP_345368.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae TIGR4]
 gi|111657952|ref|ZP_01408660.1| hypothetical protein SpneT_02000871 [Streptococcus pneumoniae
           TIGR4]
 gi|148988307|ref|ZP_01819754.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae
           SP6-BS73]
 gi|168484767|ref|ZP_02709712.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae CDC1873-00]
 gi|168485831|ref|ZP_02710339.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae CDC1087-00]
 gi|182683800|ref|YP_001835547.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae
           CGSP14]
 gi|194398118|ref|YP_002037517.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae G54]
 gi|225861227|ref|YP_002742736.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298231041|ref|ZP_06964722.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae str.
           Canada MDR_19F]
 gi|298255717|ref|ZP_06979303.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae str.
           Canada MDR_19A]
 gi|298503113|ref|YP_003725053.1| thiamine-phosphate kinase [Streptococcus pneumoniae TCH8431/19A]
 gi|303255279|ref|ZP_07341350.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae BS455]
 gi|303260406|ref|ZP_07346375.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae
           SP-BS293]
 gi|303262763|ref|ZP_07348701.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae
           SP14-BS292]
 gi|303265052|ref|ZP_07350966.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae BS397]
 gi|303267118|ref|ZP_07352987.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae BS457]
 gi|20140719|sp|Q97RE1|THII_STRPN RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|226729113|sp|B5E3Y2|THII_STRP4 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|238691150|sp|B2IP11|THII_STRPS RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|254784240|sp|C1CS14|THII_STRZT RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|14972354|gb|AAK75008.1| thiazole biosynthesis protein ThiI [Streptococcus pneumoniae TIGR4]
 gi|147925988|gb|EDK77062.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae
           SP6-BS73]
 gi|172042057|gb|EDT50103.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae CDC1873-00]
 gi|182629134|gb|ACB90082.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae
           CGSP14]
 gi|183571054|gb|EDT91582.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae CDC1087-00]
 gi|194357785|gb|ACF56233.1| Probable thiamine biosynthesis protein thiI [Streptococcus
           pneumoniae G54]
 gi|225728072|gb|ACO23923.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|298238708|gb|ADI69839.1| thiamine-phosphate kinase [Streptococcus pneumoniae TCH8431/19A]
 gi|301794014|emb|CBW36412.1| putative thiamine biosynthesis protein [Streptococcus pneumoniae
           INV104]
 gi|301801707|emb|CBW34413.1| putative thiamine biosynthesis protein [Streptococcus pneumoniae
           INV200]
 gi|302597748|gb|EFL64823.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae BS455]
 gi|302636085|gb|EFL66582.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae
           SP14-BS292]
 gi|302638441|gb|EFL68907.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae
           SP-BS293]
 gi|302643326|gb|EFL73604.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae BS457]
 gi|302645412|gb|EFL75645.1| thiamine biosynthesis protein ThiI [Streptococcus pneumoniae BS397]
 gi|327390234|gb|EGE88577.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae GA04375]
 gi|332076165|gb|EGI86631.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae GA41301]
 gi|332201344|gb|EGJ15414.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae GA47368]
 gi|332202740|gb|EGJ16809.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae GA41317]
 gi|332204884|gb|EGJ18949.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pneumoniae GA47901]
          Length = 404

 Score = 85.4 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREVRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             +  P++ + K E   +AQ+I
Sbjct: 281 GLVIINGESLGQVASQTLESMKAINAVTNT---------PIIRPVVTMDKLEIIDIAQEI 331

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 332 DTFDISIQPFED 343


>gi|319745308|gb|EFV97625.1| thiamine biosynthesis protein ThiI [Streptococcus agalactiae ATCC
           13813]
          Length = 414

 Score = 85.4 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 187 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAHDLTRKL 240

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I++       +       +     +     
Sbjct: 241 TKFGGNIQFIEVPF----------TEIQEEIKEKAPEAYLMTLTRRFMMRITDRIRENRN 290

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             +  P++ + K E   +AQ I
Sbjct: 291 GLVIINGESLGQVASQTLESMQAINAVTAT---------PIIRPVVTMDKLEIIDIAQKI 341

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 342 DTFDISIQPFED 353


>gi|18977660|ref|NP_579017.1| putative thiamin biosynthesis protein thiI [Pyrococcus furiosus DSM
           3638]
 gi|6066237|gb|AAF03222.1|AF156097_2 putative thiamine biosynthesis protein THII [Pyrococcus furiosus]
 gi|18893386|gb|AAL81412.1| putative thiamin biosynthesis protein thiI [Pyrococcus furiosus DSM
           3638]
          Length = 363

 Score = 85.4 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 61/203 (30%), Gaps = 30/203 (14%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L SGG DS       L R   V  L FD G            V +K+VE++  +  
Sbjct: 167 KVVALISGGIDSPVAAFLMLKRGAEVIALHFDQG-------TNAKKVVEKVVEILSDYSP 219

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E  +         +H  + K     +              I  L  AA +A   G  
Sbjct: 220 EPIELIV--------ENHFEILKPYVSVLAKLQKREWTCILCKIAMLKRAAEIAKEEGAL 271

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + +       +     ++ PL+   K E   +A+ IG 
Sbjct: 272 GIVTGDSLGQVAS---------QTLSNLFIETISVDYPIYRPLIGFDKEEIVSIAKRIGT 322

Query: 190 QD-LVNLILEESHTCYLGKRDKR 211
            D  +         C    R  R
Sbjct: 323 YDAFLEYPY-----CECPFRPNR 340


>gi|25011484|ref|NP_735879.1| thiamine biosynthesis protein ThiI [Streptococcus agalactiae
           NEM316]
 gi|44888494|sp|Q8E4F9|THII_STRA3 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|24413022|emb|CAD47101.1| Unknown [Streptococcus agalactiae NEM316]
          Length = 404

 Score = 85.4 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAHDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I++       +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKEKAPEAYLMTLTRRFMMRITDRIRENRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             +  P++ + K E   +AQ I
Sbjct: 281 GLVIINGESLGQVASQTLESMQAINAVTAT---------PIIRPVVTMDKLEIIDIAQKI 331

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 332 DTFDISIQPFED 343


>gi|77412106|ref|ZP_00788431.1| thiamine biosynthesis protein ThiI [Streptococcus agalactiae
           CJB111]
 gi|77161862|gb|EAO72848.1| thiamine biosynthesis protein ThiI [Streptococcus agalactiae
           CJB111]
          Length = 384

 Score = 85.4 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 157 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAHDLTRKL 210

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I++       +       +     +     
Sbjct: 211 TKFGGNIQFIEVPF----------TEIQEEIKEKAPEAYLMTLTRRFMMRITDRIRENRN 260

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             +  P++ + K E   +AQ I
Sbjct: 261 GLVIINGESLGQVASQTLESMQAINAVTAT---------PIIRPVVTMDKLEIIDIAQKI 311

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 312 DTFDISIQPFED 323


>gi|77406385|ref|ZP_00783446.1| thiamine biosynthesis protein ThiI [Streptococcus agalactiae H36B]
 gi|77175009|gb|EAO77817.1| thiamine biosynthesis protein ThiI [Streptococcus agalactiae H36B]
          Length = 384

 Score = 85.4 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 157 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAHDLTRKL 210

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I++       +       +     +     
Sbjct: 211 TKFGGNIQFIEVPF----------TEIQEEIKEKAPEAYLMTLTRRFMMRITDRIRENRN 260

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             +  P++ + K E   +AQ I
Sbjct: 261 GLVIINGESLGQVASQTLESMQAINAVTAT---------PIIRPVVTMDKLEIIDIAQKI 311

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 312 DTFDISIQPFED 323


>gi|322392197|ref|ZP_08065658.1| thiamine biosynthesis protein ThiI [Streptococcus peroris ATCC
           700780]
 gi|321144732|gb|EFX40132.1| thiamine biosynthesis protein ThiI [Streptococcus peroris ATCC
           700780]
          Length = 404

 Score = 85.4 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREVRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             +  P++ + K E   +AQ+I
Sbjct: 281 GLVIINGESLGQVASQTLESMQAINAVTNT---------PIIRPVVTMDKLEIIDIAQEI 331

Query: 188 GGQDLVNLILEE 199
              ++     E+
Sbjct: 332 DTFEISIQPFED 343


>gi|307701989|ref|ZP_07638997.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           mitis NCTC 12261]
 gi|307616634|gb|EFN95823.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           mitis NCTC 12261]
          Length = 404

 Score = 85.4 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREVRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             +  P++ + K E   +AQ+I
Sbjct: 281 GLVIINGESLGQVASQTLESMQAINAVTNT---------PIIRPVVTMDKLEIIDIAQEI 331

Query: 188 GGQDLVNLILEE 199
              ++     E+
Sbjct: 332 DTFEISIQPFED 343


>gi|289168192|ref|YP_003446461.1| thiamine biosynthesis protein [Streptococcus mitis B6]
 gi|288907759|emb|CBJ22596.1| thiamine biosynthesis protein [Streptococcus mitis B6]
          Length = 404

 Score = 85.4 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREVRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             +  P++ + K E   +AQ+I
Sbjct: 281 GLVIINGESLGQVASQTLESMQAINAVTNT---------PIIRPVVTMDKLEIIDIAQEI 331

Query: 188 GGQDLVNLILEE 199
              ++     E+
Sbjct: 332 DTFEISIQPFED 343


>gi|322389756|ref|ZP_08063303.1| thiamine biosynthesis protein ThiI [Streptococcus parasanguinis
           ATCC 903]
 gi|321143595|gb|EFX39026.1| thiamine biosynthesis protein ThiI [Streptococcus parasanguinis
           ATCC 903]
          Length = 406

 Score = 85.4 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 55/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 179 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAHDLTRKL 232

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +    G
Sbjct: 233 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREVRG 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             V  P++ + K E   +AQ+I
Sbjct: 283 GLVIINGESLGQVASQTLESMQAINAVTNT---------PVIRPVVTMDKLEIIDIAQEI 333

Query: 188 GGQDLVNLILEE 199
              ++     E+
Sbjct: 334 DTFEISIQPFED 345


>gi|296876305|ref|ZP_06900357.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           parasanguinis ATCC 15912]
 gi|296432595|gb|EFH18390.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           parasanguinis ATCC 15912]
          Length = 406

 Score = 85.4 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 55/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 179 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAHDLTRKL 232

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +    G
Sbjct: 233 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREVRG 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             V  P++ + K E   +AQ+I
Sbjct: 283 GLVIINGESLGQVASQTLESMQAINAVTNT---------PVIRPVVTMDKLEIIDIAQEI 333

Query: 188 GGQDLVNLILEE 199
              ++     E+
Sbjct: 334 DTFEISIQPFED 345


>gi|293376361|ref|ZP_06622598.1| thiamine biosynthesis/tRNA modification protein ThiI [Turicibacter
           sanguinis PC909]
 gi|325843417|ref|ZP_08167975.1| thiamine biosynthesis/tRNA modification protein ThiI [Turicibacter
           sp. HGF1]
 gi|292645050|gb|EFF63123.1| thiamine biosynthesis/tRNA modification protein ThiI [Turicibacter
           sanguinis PC909]
 gi|325489339|gb|EGC91713.1| thiamine biosynthesis/tRNA modification protein ThiI [Turicibacter
           sp. HGF1]
          Length = 409

 Score = 85.4 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 66/211 (31%), Gaps = 23/211 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   LL+ SGG DS         R   +E + F             +  ++K+++LM K 
Sbjct: 177 SGKGLLMISGGIDSPVAGYLMQKRGVEIEAIHF------ASPPYTSVRSKQKVLDLMEKN 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                 D I          H      +   I +N   +  +     +    A  +A +  
Sbjct: 231 AHYAPVDEI--------NVHVVPFTELQTAIYENIPNSYTMTVMRRMMYRIAEGIAKKRE 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G      +         I A+           + +  P+  L K E  ++A+ I
Sbjct: 283 ILVLANGESLGQVASQTLASMYAINAVTN---------MPIIRPVATLDKNEIIEIAKHI 333

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGC 218
              D+     E+  T ++ +          C
Sbjct: 334 DTYDISIRPYEDCCTVFVPEHPATNPSLEKC 364


>gi|241889865|ref|ZP_04777163.1| thiamine biosynthesis/tRNA modification protein ThiI [Gemella
           haemolysans ATCC 10379]
 gi|241863487|gb|EER67871.1| thiamine biosynthesis/tRNA modification protein ThiI [Gemella
           haemolysans ATCC 10379]
          Length = 416

 Score = 85.4 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 68/195 (34%), Gaps = 25/195 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +  +  ALLL SGG DS         +   VE + F      +          +KI +L 
Sbjct: 175 VNTSSKALLLLSGGIDSPVAAHTLQVKGVEVEMIHF------QSPPFTSAEALQKIFDLT 228

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            K    +G   +  +              +  +I      N  +       L  A  +A 
Sbjct: 229 IKLSQVVGRIKLHVVNF----------TKLQTEIVKRVPSNYTMTSTRRFMLRIAEEVAK 278

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           + G   I  G      +          + +E+   +   +++ V  PL+ + K +  K+A
Sbjct: 279 KEGCLAIATGESLGQVAS---------QTLESMNCINEVTNLPVLRPLLTMDKVDIIKIA 329

Query: 185 QDIGGQDLVNLILEE 199
           Q+I   ++ NL  E+
Sbjct: 330 QEIDTLEISNLPFED 344


>gi|327439220|dbj|BAK15585.1| thiamine biosynthesis ATP pyrophosphatase [Solibacillus silvestris
           StLB046]
          Length = 403

 Score = 85.4 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +LL+ SGG DS       + R  R++ + F                 +K+ EL  + 
Sbjct: 179 NGRSLLMLSGGIDSPVAGYLMMKRGVRLDAIHFF------SPPYTSDNALQKVKELANEL 232

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                   +  +              + + ++D    N  +     + +  A  +   +G
Sbjct: 233 TKFGANIRLHVIPF----------TELQVAVKDAVPDNMSMTSTRRMMMKVADKVREEVG 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I  +             +  PL+   K +  K+A+DI
Sbjct: 283 ALGIVTGESLGQVASQTLESLTAINDVTNT---------PILRPLISADKNDIIKIAKDI 333

Query: 188 GGQDLVNLILEE 199
           G  +      E+
Sbjct: 334 GTYETSIQPFED 345


>gi|322385589|ref|ZP_08059233.1| thiamine biosynthesis protein ThiI [Streptococcus cristatus ATCC
           51100]
 gi|321270327|gb|EFX53243.1| thiamine biosynthesis protein ThiI [Streptococcus cristatus ATCC
           51100]
          Length = 404

 Score = 85.4 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +    G
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKSKAPEAYLMTLTRRFMMRITDRIREERG 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             V  P++ + K E  ++A+ I
Sbjct: 281 GQVIINGESLGQVASQTIESMQAINAVTNT---------PVIRPVVTMDKLEIIEIAEKI 331

Query: 188 GGQDLVNLILEE 199
               +     E+
Sbjct: 332 DTFQISIQPFED 343


>gi|254450437|ref|ZP_05063874.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
 gi|198264843|gb|EDY89113.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
          Length = 611

 Score = 85.4 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 33/236 (13%), Positives = 69/236 (29%), Gaps = 22/236 (9%)

Query: 8   APSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            P ++L+FSGG DS        ++R  +V  +S                +     +L   
Sbjct: 148 EPDSVLMFSGGLDSYAGALEEIIERKHKVALISH----------FSATKIAPIQRDLQKH 197

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               LG   ++   +   +       N     +  +     +     I         Y  
Sbjct: 198 MAQKLGPQMLMHFPMRVQLKRG---TNAEGTHRARSFLFAALGMATAIAFGQKRVSFYEN 254

Query: 127 GITNIVIGVCETD--YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           G+ ++ +                  T++  E   ++  + ++ V  P  W  K E  +  
Sbjct: 255 GVVSLNLPPVGNVLGTRATRTTHPQTLQRFEALFSMIFDQNLRVDNPFFWRTKTEVVQTI 314

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
             +G  D +      + +C       + +    C  C  C  R+   +       D
Sbjct: 315 ARLGMADQIAF----TRSC--ADVHNQTKQYAHCGRCSQCVDRRFAMLAAGLAGHD 364


>gi|77408236|ref|ZP_00784980.1| thiamine biosynthesis protein ThiI [Streptococcus agalactiae COH1]
 gi|77173177|gb|EAO76302.1| thiamine biosynthesis protein ThiI [Streptococcus agalactiae COH1]
          Length = 384

 Score = 85.4 bits (209), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 157 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAHDLTRKL 210

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I++       +       +     +     
Sbjct: 211 TKFGGNIQFIEVPF----------TEIQEEIKEKAPEAYLMTLTRRFMMRITDRIREDRN 260

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             +  P++ + K E   +AQ I
Sbjct: 261 GLVIINGESLGQVASQTLESMQAINAVTAT---------PIIRPVVTMDKLEIIDIAQKI 311

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 312 DTFDISIQPFED 323


>gi|325571590|ref|ZP_08147090.1| thiamine biosynthesis protein ThiI [Enterococcus casseliflavus ATCC
           12755]
 gi|325156066|gb|EGC68262.1| thiamine biosynthesis protein ThiI [Enterococcus casseliflavus ATCC
           12755]
          Length = 402

 Score = 85.4 bits (209), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 62/192 (32%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS     +A+ R   +E + F                 +K  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYFAMKRGVEIEAVHF------ASPPYTSEQALQKAKDLTKKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +G    + +              +  +I++      ++     + L     +     
Sbjct: 231 APYVGSIQFIEVPF----------TEIQEEIKNRVPQGYWMTITRRMMLRLTDAIREARH 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +          + + + + +   ++  +  P+  + K E  ++A+ I
Sbjct: 281 GLIILNGESLGQVAS---------QTLHSMVAINEVTNTPIVRPVATMDKLEIIEVAEAI 331

Query: 188 GGQDLVNLILEE 199
              +L     E+
Sbjct: 332 DTFELSVQPFED 343


>gi|257865149|ref|ZP_05644802.1| thiamine biosynthesis protein [Enterococcus casseliflavus EC30]
 gi|257871473|ref|ZP_05651126.1| thiamine biosynthesis protein [Enterococcus casseliflavus EC10]
 gi|257874765|ref|ZP_05654418.1| thiamine biosynthesis protein [Enterococcus casseliflavus EC20]
 gi|257799083|gb|EEV28135.1| thiamine biosynthesis protein [Enterococcus casseliflavus EC30]
 gi|257805637|gb|EEV34459.1| thiamine biosynthesis protein [Enterococcus casseliflavus EC10]
 gi|257808931|gb|EEV37751.1| thiamine biosynthesis protein [Enterococcus casseliflavus EC20]
          Length = 402

 Score = 85.4 bits (209), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 62/192 (32%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS     +A+ R   +E + F                 +K  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYFAMKRGVEIEAVHF------ASPPYTSEQALQKAKDLTKKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +G    + +              +  +I++      ++     + L     +     
Sbjct: 231 APYVGSIQFIEVPF----------TEIQEEIKNRVPQGYWMTITRRMMLRLTDAIREARH 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +          + + + + +   ++  +  P+  + K E  ++A+ I
Sbjct: 281 GLIILNGESLGQVAS---------QTLHSMVAINEVTNTPIVRPVATMDKLEIIEVAEAI 331

Query: 188 GGQDLVNLILEE 199
              +L     E+
Sbjct: 332 DTFELSVQPFED 343


>gi|153006833|ref|YP_001381158.1| ExsB family protein [Anaeromyxobacter sp. Fw109-5]
 gi|152030406|gb|ABS28174.1| ExsB family protein [Anaeromyxobacter sp. Fw109-5]
          Length = 195

 Score = 85.4 bits (209), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 53/216 (24%), Positives = 81/216 (37%), Gaps = 28/216 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           S + L SGG DS+       +       L  DYGQR++           +          
Sbjct: 2   SVVPLVSGGLDSAVMSILIREEGLEQHPLFIDYGQRSRSAELTACRRVFR--------AH 53

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            L    +  L   G +  S LT        D      F+PGRN++FL+ AA  AY+    
Sbjct: 54  QLPRPAVAKLPGYGRLIPSGLTDKSMRLFDD-----AFLPGRNLLFLLTAAAYAYKRSAR 108

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            + IG+ +  Y+ +PD     ++  E  I+  M     V  P+M   K +  +LAQ+   
Sbjct: 109 AVAIGLLDERYALFPDQTRSFVQEAEHLISNCMGVPFVVLAPMMHFSKVDVLRLAQEYNV 168

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACY 225
                      H+C+ G           C +C AC 
Sbjct: 169 VGA--------HSCHAGT-------ATPCGACVACR 189


>gi|300361438|ref|ZP_07057615.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           gasseri JV-V03]
 gi|300354057|gb|EFJ69928.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           gasseri JV-V03]
          Length = 405

 Score = 85.0 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS      A+ R   ++ + F                  K  EL     +
Sbjct: 179 RAVMMLSGGIDSPVASYLAMKRGVEIDMVHFF------SPPYTTEKALAKAKELTGILAN 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+ + + +              +  +I++       +  +    L  A  +    G  
Sbjct: 233 YSGKINFIAVPF----------TEIQEQIKEKLPEGYLMTIQRRFMLQLADHIRAMRGGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+ + +   +   V  P+  + K E  KLA+ IG 
Sbjct: 283 AIFNGESVGQVAS---------QTLESMVAINDVTSTPVLRPVATMDKTEIIKLAEQIGT 333

Query: 190 QDLVNLILEE 199
            DL     E+
Sbjct: 334 FDLSIEPFED 343


>gi|315195619|gb|EFU26006.1| putative thiamine biosynthesis protein [Staphylococcus aureus
           subsp. aureus CGS00]
          Length = 407

 Score = 85.0 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                ++K++EL     +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHFH------SPPFTSDQAKEKVIELTRILAE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              +  ++     P   +     + +  A  L +++G  
Sbjct: 233 RVGPIKLHIVPF----------TELQKQVNKVVHPRYTMTSTRRMMMRVADKLVHQIGAY 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + + +   +   +   V  PL+   K E    +++IG 
Sbjct: 283 AIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 FETSIQPFED 343


>gi|283470981|emb|CAQ50192.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus ST398]
          Length = 407

 Score = 85.0 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                ++K++EL     +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHFH------SPPFTSDQAKEKVIELTRILAE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              +  ++     P   +     + +  A  L +++G  
Sbjct: 233 RVGPIKLHIVPF----------TELQKQVNKVVHPRYTMTSTRRMMMRVADKLVHQIGAY 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + + +   +   +   V  PL+   K E    +++IG 
Sbjct: 283 AIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 FETSIQPFED 343


>gi|282916975|ref|ZP_06324733.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus D139]
 gi|283770793|ref|ZP_06343685.1| thiamine biosynthesis protein thiI [Staphylococcus aureus subsp.
           aureus H19]
 gi|282319462|gb|EFB49814.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus D139]
 gi|283460940|gb|EFC08030.1| thiamine biosynthesis protein thiI [Staphylococcus aureus subsp.
           aureus H19]
          Length = 407

 Score = 85.0 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                ++K++EL     +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHFH------SPPFTSDQAKEKVIELTRILAE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              +  ++     P   +     + +  A  L +++G  
Sbjct: 233 RVGPIKLHIVPF----------TELQKQVNKVVHPRYTMTSTRRMMMRVADKLVHQIGAY 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + + +   +   +   V  PL+   K E    +++IG 
Sbjct: 283 AIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 FETSIQPFED 343


>gi|257425829|ref|ZP_05602253.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257428495|ref|ZP_05604893.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257431129|ref|ZP_05607506.1| thiamine biosynthesis protein thiI [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257433811|ref|ZP_05610169.1| thiamine biosynthesis protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436728|ref|ZP_05612772.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus M876]
 gi|282904285|ref|ZP_06312173.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus C160]
 gi|282906110|ref|ZP_06313965.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282909025|ref|ZP_06316843.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus WW2703/97]
 gi|282911341|ref|ZP_06319143.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus WBG10049]
 gi|282914510|ref|ZP_06322296.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
           aureus M899]
 gi|282919478|ref|ZP_06327213.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus C427]
 gi|282924856|ref|ZP_06332522.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus C101]
 gi|283958465|ref|ZP_06375916.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus A017934/97]
 gi|293503588|ref|ZP_06667435.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus 58-424]
 gi|293510604|ref|ZP_06669309.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus M809]
 gi|293537145|ref|ZP_06671825.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
           aureus M1015]
 gi|297590752|ref|ZP_06949390.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus MN8]
 gi|257271523|gb|EEV03669.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257275336|gb|EEV06823.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257278077|gb|EEV08725.1| thiamine biosynthesis protein thiI [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257281904|gb|EEV12041.1| thiamine biosynthesis protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284079|gb|EEV14202.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus M876]
 gi|282313222|gb|EFB43618.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus C101]
 gi|282317288|gb|EFB47662.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus C427]
 gi|282321691|gb|EFB52016.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
           aureus M899]
 gi|282325036|gb|EFB55346.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus WBG10049]
 gi|282327289|gb|EFB57584.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus WW2703/97]
 gi|282331402|gb|EFB60916.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282595903|gb|EFC00867.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus C160]
 gi|283790614|gb|EFC29431.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus A017934/97]
 gi|290919990|gb|EFD97058.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
           aureus M1015]
 gi|291095254|gb|EFE25519.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus 58-424]
 gi|291466495|gb|EFF09016.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus M809]
 gi|297575638|gb|EFH94354.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus MN8]
 gi|312437828|gb|ADQ76899.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus TCH60]
          Length = 407

 Score = 85.0 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                ++K++EL     +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHFH------SPPFTSDQAKEKVIELTRILAE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              +  ++     P   +     + +  A  L +++G  
Sbjct: 233 RVGPIKLHIVPF----------TELQKQVNKVVHPRYTMTSTRRMMMRVADKLVHQIGAY 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + + +   +   +   V  PL+   K E    +++IG 
Sbjct: 283 AIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 FETSIQPFED 343


>gi|49483956|ref|YP_041180.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|295428285|ref|ZP_06820914.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|56749733|sp|Q6GFZ2|THII_STAAR RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|49242085|emb|CAG40784.1| putative thiamine biosynthesis protein [Staphylococcus aureus
           subsp. aureus MRSA252]
 gi|295127685|gb|EFG57322.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus EMRSA16]
          Length = 407

 Score = 85.0 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                ++K++EL     +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHFH------SPPFTSDQAKEKVIELTRILAE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              +  ++     P   +     + +  A  L +++G  
Sbjct: 233 RVGPIKLHIVPF----------TELQKQVNKVVHPRYTMTSTRRMMMRVADKLVHQIGAY 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + + +   +   +   V  PL+   K E    +++IG 
Sbjct: 283 AIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 FETSIQPFED 343


>gi|125717889|ref|YP_001035022.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK36]
 gi|189030668|sp|A3CMR7|THII_STRSV RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|125497806|gb|ABN44472.1| Thiamine biosynthesis protein, putative [Streptococcus sanguinis
           SK36]
          Length = 404

 Score = 85.0 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 52/192 (27%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREERS 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             V  P++ + K E   +A+ I
Sbjct: 281 AQVIINGESLGQVASQTIESMQAINAVTNT---------PVIRPVVTMDKLEIIDIAEKI 331

Query: 188 GGQDLVNLILEE 199
               +     E+
Sbjct: 332 DTFQISIQPFED 343


>gi|76787749|ref|YP_330013.1| thiamine biosynthesis protein ThiI [Streptococcus agalactiae A909]
 gi|123601586|sp|Q3K0E0|THII_STRA1 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|76562806|gb|ABA45390.1| thiamine biosynthesis protein ThiI [Streptococcus agalactiae A909]
          Length = 404

 Score = 85.0 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 53/192 (27%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK   L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAHALTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I++       +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKEKAPEAYLMTLTRRFMMRITDRIRENRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             +  P++ + K E   +AQ I
Sbjct: 281 GLVIINGESLGQVASQTLESMQAINAVTAT---------PIIRPVVTMDKLEIIDIAQKI 331

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 332 DTFDISIQPFED 343


>gi|270293013|ref|ZP_06199224.1| thiazole biosynthesis protein ThiI [Streptococcus sp. M143]
 gi|270278992|gb|EFA24838.1| thiazole biosynthesis protein ThiI [Streptococcus sp. M143]
          Length = 404

 Score = 85.0 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 53/192 (27%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKSKAPEAYLMTLTRRFMMRITDRIREVRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             +  P++ + K E   +AQ I
Sbjct: 281 GLVIINGESLGQVASQTLESMQAINAVTNT---------PIIRPVVTMDKLEIIDIAQKI 331

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 332 DTFDISIQPFED 343


>gi|312277817|gb|ADQ62474.1| Probable tRNA sulfurtransferase [Streptococcus thermophilus ND03]
          Length = 407

 Score = 85.0 bits (208), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +L+ SGG DS      AL R   +E + F                 KK  +L  K   
Sbjct: 181 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKLTK 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G    + +           T+      +           R  +  +       R G+ 
Sbjct: 235 FGGNIQFIEVPF---------TEIQEEIKEKAPEAYLMTLTRRFMMRITDRIREERCGLV 285

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I         S          + +E+   +   +   V  P++ + K E   LAQ I  
Sbjct: 286 IINGESLGQVAS----------QTMESMQAINAVTCTPVIRPVVTMDKLEIIDLAQKIDT 335

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 336 FDISIQPFED 345


>gi|55820500|ref|YP_138942.1| thiamine biosynthesis protein ThiI [Streptococcus thermophilus LMG
           18311]
 gi|55736485|gb|AAV60127.1| thiamine biosynthesis protein [Streptococcus thermophilus LMG
           18311]
          Length = 407

 Score = 85.0 bits (208), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +L+ SGG DS      AL R   +E + F                 KK  +L  K   
Sbjct: 181 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKLTK 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G    + +           T+      +           R  +  +       R G+ 
Sbjct: 235 FGGNIQFIEVPF---------TEIQEEIKEKAPEAYLMTLTRRFMMRITDRIREERCGLV 285

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I         S          + +E+   +   +   V  P++ + K E   LAQ I  
Sbjct: 286 IINGESLGQVAS----------QTMESMQAINAVTCTPVIRPVVTMDKLEIIDLAQKIDT 335

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 336 FDISIQPFED 345


>gi|116627313|ref|YP_819932.1| thiamine biosynthesis protein ThiI [Streptococcus thermophilus
           LMD-9]
 gi|116100590|gb|ABJ65736.1| Thiamine biosynthesis ATP pyrophosphatase [Streptococcus
           thermophilus LMD-9]
          Length = 407

 Score = 85.0 bits (208), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +L+ SGG DS      AL R   +E + F                 KK  +L  K   
Sbjct: 181 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKLTK 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G    + +           T+      +           R  +  +       R G+ 
Sbjct: 235 FGGNIQFIEVPF---------TEIQEEIKEKAPEAYLMTLTRRFMMRITDRIREERCGLV 285

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I         S          + +E+   +   +   V  P++ + K E   LAQ I  
Sbjct: 286 IINGESLGQVAS----------QTMESMQAINAVTCTPVIRPVVTMDKLEIIDLAQKIDT 335

Query: 190 QDLVNLILEE 199
            D+     E+
Sbjct: 336 FDISIQPFED 345


>gi|268610563|ref|ZP_06144290.1| thiamine biosynthesis/tRNA modification protein ThiI [Ruminococcus
           flavefaciens FD-1]
          Length = 390

 Score = 85.0 bits (208), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 56/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+LL SGG DS         R   +  + +                + K+ +L  K 
Sbjct: 178 SGKAMLLLSGGIDSPVAGYMMAKRGIHIAAIHY------VSPPYTSDRAQLKVEQLCQKL 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G          G   +      +   I+DN     F      + +  A  +A +  
Sbjct: 232 TAYCG----------GVAFYCVPFTEIQEAIKDNCPEEFFTIIMRRLMMEIAQRIAEKDN 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +           A            + V  P + + K E  ++A+ I
Sbjct: 282 CLALITGESVGQVASQTMAAMVCTDAACR---------IPVFRPCVGMDKTEIIEIARKI 332

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 333 DTFDISVQPYED 344


>gi|295398651|ref|ZP_06808675.1| thiamine biosynthesis/tRNA modification protein ThiI [Aerococcus
           viridans ATCC 11563]
 gi|294973086|gb|EFG48889.1| thiamine biosynthesis/tRNA modification protein ThiI [Aerococcus
           viridans ATCC 11563]
          Length = 415

 Score = 85.0 bits (208), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 60/189 (31%), Gaps = 25/189 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           A+L+ SGG DS      A+ R  R+  + F                  K  +L  K    
Sbjct: 191 AVLMLSGGIDSPVAGYLAMKRGMRITAVHF------ASPPYTSPQALNKAKDLTEKLTKF 244

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  + + +                  I+++  P   +     + +  +  L  +     
Sbjct: 245 GGWINFVEVPF----------TETQEAIKEHVNPAYLMTITRRMMMRISDELRKQYNGLA 294

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           I+ G      +          + +E+   +   +   +  P++ + K E   ++Q I   
Sbjct: 295 IINGESIGQVAS---------QTLESMFAINEVTSTPIIRPVVAMDKLEIIDISQKIDTF 345

Query: 191 DLVNLILEE 199
           DL     E+
Sbjct: 346 DLSIQPFED 354


>gi|315612901|ref|ZP_07887812.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           sanguinis ATCC 49296]
 gi|315315011|gb|EFU63052.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           sanguinis ATCC 49296]
          Length = 404

 Score = 85.0 bits (208), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 56/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAHDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREVRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +        TI A+ +           +  P++ + K E   +AQ+I
Sbjct: 281 GLVIINGESLGQVASQTLESMQTINAVTST---------PIIRPVVTMDKLEIIDIAQEI 331

Query: 188 GGQDLVNLILEE 199
              ++     E+
Sbjct: 332 DTFEISIQPFED 343


>gi|306829244|ref|ZP_07462434.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           mitis ATCC 6249]
 gi|304428330|gb|EFM31420.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           mitis ATCC 6249]
          Length = 404

 Score = 85.0 bits (208), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 56/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAHDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREVRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +        TI A+ +           +  P++ + K E   +AQ+I
Sbjct: 281 GLVIINGESLGQVASQTLESMQTINAVTST---------PIIRPVVTMDKLEIIDIAQEI 331

Query: 188 GGQDLVNLILEE 199
              ++     E+
Sbjct: 332 DTFEISIQPFED 343


>gi|293365132|ref|ZP_06611849.1| thiamine biosynthesis protein ThiI [Streptococcus oralis ATCC
           35037]
 gi|307702163|ref|ZP_07639123.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           oralis ATCC 35037]
 gi|291316582|gb|EFE57018.1| thiamine biosynthesis protein ThiI [Streptococcus oralis ATCC
           35037]
 gi|307624176|gb|EFO03153.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           oralis ATCC 35037]
          Length = 404

 Score = 85.0 bits (208), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 56/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREVRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +        TI A+ +           +  P++ + K E   +AQ+I
Sbjct: 281 GLVIINGESLGQVASQTLESMQTINAVTST---------PIIRPVVTMDKLEIIDIAQEI 331

Query: 188 GGQDLVNLILEE 199
              ++     E+
Sbjct: 332 DTFEISIQPFED 343


>gi|255305407|ref|ZP_05349579.1| hypothetical protein CdifA_02378 [Clostridium difficile ATCC 43255]
          Length = 487

 Score = 85.0 bits (208), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 32/244 (13%), Positives = 68/244 (27%), Gaps = 13/244 (5%)

Query: 2   NDIIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           N++IK      + LFSGG DS       L+   +V  ++      +K+  +    + +++
Sbjct: 148 NEMIKNRDFDCVSLFSGGLDSFCGALRLLENNKKVFFVTC---MEHKLLKKRVNDIYRRV 204

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
               PK   ++      P   +          +       + L          I      
Sbjct: 205 DRGYPKLNKNIYVFSANPKRPMNVSKELLNKFSEDTSRSRSFLFMAVAIAVVSIINPKEG 264

Query: 121 TLAYRLGITNI-VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
                 G   I +        S      H         I   ++ ++ +     +  K E
Sbjct: 265 VYIPENGFIGINLPLTKSRLGSCSTRTTHVWALKRLNEILTLLDINIPITNFYKYNTKGE 324

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG--CNSCPACYLRQKGWMEFK-- 235
                 +     +    ++ + +C      +         C  C  C +R+    +    
Sbjct: 325 IVD---EFKNNKIFKECVKLTLSCSHPTHGRMAGATPPINCGYCYPCMIRRASLYKIGFD 381

Query: 236 -EKY 238
             KY
Sbjct: 382 DTKY 385


>gi|302392042|ref|YP_003827862.1| thiamine biosynthesis/tRNA modification protein ThiI [Acetohalobium
           arabaticum DSM 5501]
 gi|302204119|gb|ADL12797.1| thiamine biosynthesis/tRNA modification protein ThiI [Acetohalobium
           arabaticum DSM 5501]
          Length = 391

 Score = 85.0 bits (208), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 56/190 (29%), Gaps = 24/190 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A LL SGG DS      A+ R   +  + F                ++K+++L     +
Sbjct: 179 KAGLLLSGGIDSPVAGWMAMKRGVEIMPIYFH------TPPFTSSRAKEKVLDLSRVLAE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G    + +              V   + +             + +  A  +       
Sbjct: 233 YAGGSLQVRIVPF---------TEVQKALNEKCPEKLLTVIMRRMMMRIAERITNNNEGK 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++ G      +       +   A+           + V  PL+ L K E    A++IG 
Sbjct: 284 ALITGESIGQVASQTLESMNVTNAVAQ---------MPVFRPLIGLDKNEIKARAKEIGT 334

Query: 190 QDLVNLILEE 199
            ++     ++
Sbjct: 335 YEISIQPYDD 344


>gi|326803752|ref|YP_004321570.1| thiamine biosynthesis/tRNA modification protein ThiI [Aerococcus
           urinae ACS-120-V-Col10a]
 gi|326651235|gb|AEA01418.1| thiamine biosynthesis/tRNA modification protein ThiI [Aerococcus
           urinae ACS-120-V-Col10a]
          Length = 407

 Score = 85.0 bits (208), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 56/188 (29%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +L+ SGG DS      A+ R  R   + F                 +K  +L  K     
Sbjct: 182 ILMLSGGIDSPVAGYLAMKRGVRPIAIHF------ASPPYTSPQALEKAKQLAGKLTKFG 235

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
                + +              +   I+++      +     + L  A  +  +    +I
Sbjct: 236 SWIDFIEVPF----------TEIQEAIKEHIPSEYLMTITRRMMLRVADRIRDQYHALSI 285

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           + G      +         I A+ T           +  P++ + K E   +AQ I   D
Sbjct: 286 INGESLGQVASQTAESMYAINAVTTT---------PIIRPVVTMDKLEIIDIAQAIDTFD 336

Query: 192 LVNLILEE 199
           L     E+
Sbjct: 337 LSIQPFED 344


>gi|319939302|ref|ZP_08013663.1| thiamine biosynthesis ATP pyrophosphatase [Streptococcus anginosus
           1_2_62CV]
 gi|319811556|gb|EFW07840.1| thiamine biosynthesis ATP pyrophosphatase [Streptococcus anginosus
           1_2_62CV]
          Length = 404

 Score = 85.0 bits (208), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +    G
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREERG 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             +  P++ + K E   +A+ I
Sbjct: 281 GLVIINGESLGQVASQTLESMQAINAVTNT---------PIIRPVVTMDKLEIIDIAEKI 331

Query: 188 GGQDLVNLILEE 199
              ++     E+
Sbjct: 332 DTFNISIQPFED 343


>gi|164687601|ref|ZP_02211629.1| hypothetical protein CLOBAR_01242 [Clostridium bartlettii DSM
           16795]
 gi|164603375|gb|EDQ96840.1| hypothetical protein CLOBAR_01242 [Clostridium bartlettii DSM
           16795]
          Length = 408

 Score = 85.0 bits (208), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 52/192 (27%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              A+ L SGG DS         R   VE + F                 +K+ +L    
Sbjct: 196 NGKAMSLLSGGIDSPVASWMVAKRGVEVECIHFH------TYPFTSEKSMEKVRDLARIL 249

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  + +L           +   +  N              +  A  +     
Sbjct: 250 AKYCGKVRLHKVNLL----------EIQKAVGVNCKEEAMTIISRRFMMRIAEEVGKLRR 299

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +           A            + V  PL+ + K E   +A+ I
Sbjct: 300 CDALVTGESIGQVASQTIQGLTCTNAS---------VSMPVFRPLIAMDKTEIIDVAKTI 350

Query: 188 GGQDLVNLILEE 199
           G  +   +  E+
Sbjct: 351 GTFETSIIPEED 362


>gi|260663359|ref|ZP_05864250.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           fermentum 28-3-CHN]
 gi|260552211|gb|EEX25263.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           fermentum 28-3-CHN]
          Length = 406

 Score = 85.0 bits (208), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 57/190 (30%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +++ SGG DS      AL R   +E + F                  K  EL  K   
Sbjct: 180 KGMMMLSGGIDSPVAAYLALKRGVSLEMVHFY------SPPYTSEQALAKAKELTGKLAK 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G    + +              +   +++       +  +  + L  A  LA +    
Sbjct: 234 YSGSIKFIQVPF----------TEIQETVKEKVPEGYLMTVQRRLMLRLACALAQKRAGL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +  G      +                + +   + + V  P++   K E  K+A+ I  
Sbjct: 284 AVFNGESLGQVASQTMESM---------LAIEDVTTMPVLRPVLSYDKNEIIKIAEGIDT 334

Query: 190 QDLVNLILEE 199
            DL  L  E+
Sbjct: 335 YDLSILPYED 344


>gi|289423018|ref|ZP_06424838.1| conserved hypothetical protein [Peptostreptococcus anaerobius
           653-L]
 gi|289156592|gb|EFD05237.1| conserved hypothetical protein [Peptostreptococcus anaerobius
           653-L]
          Length = 428

 Score = 84.6 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 71/236 (30%), Gaps = 22/236 (9%)

Query: 12  LLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           + +FSGG DS       L+   D+   +S   G +   E +    +++K           
Sbjct: 143 ICMFSGGMDSFIGAIDLLESNSDKTLFVSHYGGGKGTKEFQ--DILKEKF------INQY 194

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
             E           +S    T      +  ++        R  + LV        L I +
Sbjct: 195 SLESRDFHQYYAKIVSGIEDTTRTRSFMFFSHALAVASCLRKQVQLVIPENGFISLNIPS 254

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
                     +      H     +   +   +E  VT+  P  +  K E     +    Q
Sbjct: 255 TF----SRIGTSSTRTTHPHYMGLFQKLLDLIELKVTLVNPYQFKTKGEMLLNCK---NQ 307

Query: 191 DLVNLILEESHTCYLGK--RDKRYEWGYGCNSCPACYLRQKGWMEFKE----KYQD 240
             V   L+ + +C      R ++ +    C  C  C +RQ   M         Y+D
Sbjct: 308 SFVRENLDNTMSCSHPDNGRMQKEKEARHCGYCLPCVIRQAAIMRAGIIDQSSYRD 363


>gi|258511246|ref|YP_003184680.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Alicyclobacillus acidocaldarius subsp. acidocaldarius
           DSM 446]
 gi|257477972|gb|ACV58291.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Alicyclobacillus acidocaldarius subsp. acidocaldarius
           DSM 446]
          Length = 400

 Score = 84.6 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 64/193 (33%), Gaps = 25/193 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +   L+L SGG DS      A+ R   +E + F                ++K+ +L   
Sbjct: 176 MSGKGLVLLSGGIDSPVAAWKAMKRGLALELVHFH------SFPFTSERAQQKVEDLAAI 229

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G   +  ++             +  +IQ +            + +  A+ +A  +
Sbjct: 230 LTKWGGPMKLHLVS----------VTAIQAEIQRSAPEGLRTILLRRMMVRAASRIADEV 279

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   +V G      +       + +            +  T+  PL+   K E  +LA+ 
Sbjct: 280 GAGALVTGDSLGQVASQTLSALNAVDRA---------TDHTILRPLIAEDKLEIIELAKR 330

Query: 187 IGGQDLVNLILEE 199
           +G  D+  L  ++
Sbjct: 331 MGTYDISILPFDD 343


>gi|218289884|ref|ZP_03494074.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Alicyclobacillus acidocaldarius LAA1]
 gi|218240024|gb|EED07210.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Alicyclobacillus acidocaldarius LAA1]
          Length = 400

 Score = 84.6 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 64/193 (33%), Gaps = 25/193 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +   L+L SGG DS      A+ R   +E + F                ++K+ +L   
Sbjct: 176 MSGKGLVLLSGGIDSPVAAWKAMKRGLALELVHFH------SFPFTSERAQQKVEDLAAI 229

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G   +  ++             +  +IQ +            + +  A+ +A  +
Sbjct: 230 LTKWGGPMKLHLVS----------VTAIQAEIQRSAPEGLRTILLRRMMVRAASRIADEV 279

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   +V G      +       + +            +  T+  PL+   K E  +LA+ 
Sbjct: 280 GAGALVTGDSLGQVASQTLSALNAVDRA---------TDHTILRPLIAEDKLEIIELAKR 330

Query: 187 IGGQDLVNLILEE 199
           +G  D+  L  ++
Sbjct: 331 MGTYDISILPFDD 343


>gi|332366587|gb|EGJ44331.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK1059]
          Length = 404

 Score = 84.6 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 51/192 (26%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TKFGGNIEFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREERS 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             V  P++ + K E   +A+ I
Sbjct: 281 AQVIINGESLGQVASQTIESMQAINAVTNT---------PVIRPVVTMDKLEIIDIAEKI 331

Query: 188 GGQDLVNLILEE 199
                     E+
Sbjct: 332 DTFQTSIQPFED 343


>gi|322388138|ref|ZP_08061742.1| thiamine biosynthesis protein ThiI [Streptococcus infantis ATCC
           700779]
 gi|321140810|gb|EFX36311.1| thiamine biosynthesis protein ThiI [Streptococcus infantis ATCC
           700779]
          Length = 404

 Score = 84.6 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDCIREVRK 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             +  P++ + K E   +AQ+I
Sbjct: 281 GLVIINGESLGQVASQTLESMQAINAVTNT---------PIIRPVVTMDKLEIIDIAQEI 331

Query: 188 GGQDLVNLILEE 199
              ++     E+
Sbjct: 332 DTFEISIQPFED 343


>gi|225868671|ref|YP_002744619.1| thiamine biosynthesis protein [Streptococcus equi subsp.
           zooepidemicus]
 gi|259518591|sp|C0MGK8|THII_STRS7 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|225701947|emb|CAW99481.1| putative thiamine biosynthesis protein [Streptococcus equi subsp.
           zooepidemicus]
          Length = 404

 Score = 84.6 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 55/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      +L R   +E + F                 +K  +L  + 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLSLKRGVEIEAVHF------ASPPYTSPGALRKAKDLTQRL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       L     +  +  
Sbjct: 231 TRFGGNIQFIEVPF----------TEIQEEIKHKAPEAYLMTLTRRFMLRITDAIREKRK 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+ +           +  P++ + K E   +AQ I
Sbjct: 281 ALVIINGESLGQVASQTLESMQAINAVTST---------PIIRPVVAMDKLEIIDIAQQI 331

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 332 DTFDISIQPFED 343


>gi|225870374|ref|YP_002746321.1| thiamine biosynthesis protein [Streptococcus equi subsp. equi 4047]
 gi|254784231|sp|C0M8U4|THII_STRE4 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|225699778|emb|CAW93573.1| putative thiamine biosynthesis protein [Streptococcus equi subsp.
           equi 4047]
          Length = 404

 Score = 84.6 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 55/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      +L R   +E + F                 +K  +L  + 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLSLKRGVEIEAVHF------ASPPYTSPGALRKAKDLTQRL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       L     +  +  
Sbjct: 231 TRFGGNIQFIEVPF----------TEIQEEIKHKAPEAYLMTLTRRFMLRITDAIREKRK 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+ +           +  P++ + K E   +AQ I
Sbjct: 281 ALVIINGESLGQVASQTLESMQAINAVTST---------PIIRPVVAMDKLEIIDIAQQI 331

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 332 DTFDISIQPFED 343


>gi|288905545|ref|YP_003430767.1| thiamine biosynthesis protein ThiI [Streptococcus gallolyticus
           UCN34]
 gi|288732271|emb|CBI13838.1| Putative thiamine biosynthesis protein ThiI [Streptococcus
           gallolyticus UCN34]
          Length = 404

 Score = 84.6 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 54/188 (28%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +L+ SGG DS      AL R   +E + F                 KK  +L  K     
Sbjct: 181 MLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKLTKFG 234

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G    + +              +  +I++       +       +     +        I
Sbjct: 235 GNIDFIEVPF----------TEIQEEIKEKAPEAYLMTLTRRFMMRITDRIREERNGLVI 284

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           + G      +         I A+   +         +  P++ + K E   +AQ I   D
Sbjct: 285 INGESLGQVASQTLESMRAINAVTATL---------IIRPVVTMDKLEIIDIAQKIDTFD 335

Query: 192 LVNLILEE 199
           +     E+
Sbjct: 336 ISIQPFED 343


>gi|327459726|gb|EGF06066.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK1057]
          Length = 404

 Score = 84.6 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 55/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEVVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +  + G
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDQIREKRG 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             V  P++ + K E  ++A+ I
Sbjct: 281 AQVIINGESLGQVASQTIESMQAINAVTNT---------PVIRPVVTMDKLEIIEIAEKI 331

Query: 188 GGQDLVNLILEE 199
               +     E+
Sbjct: 332 DTFQISIQPFED 343


>gi|307706813|ref|ZP_07643618.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           mitis SK321]
 gi|307617898|gb|EFN97060.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           mitis SK321]
          Length = 404

 Score = 84.6 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 53/192 (27%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREVRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             +  P++ + K E   +AQ I
Sbjct: 281 GLVIINGESLGQVASQTLESMQAINAVTNT---------PIIRPVVTMDKLEIIDIAQAI 331

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 332 DTFDISIQPFED 343


>gi|300856004|ref|YP_003780988.1| putative thiamine biosynthesis protein [Clostridium ljungdahlii DSM
           13528]
 gi|300436119|gb|ADK15886.1| predicted thiamine biosynthesis protein [Clostridium ljungdahlii
           DSM 13528]
          Length = 380

 Score = 84.6 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 61/192 (31%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             S +L+ SGG DS         R  R+  + F                ++K+ EL    
Sbjct: 171 NGSTMLMLSGGIDSPVAGYMMARRGVRLNCVYFH------SHPYTSERAKEKVKELARIL 224

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           K   G  ++            +    + M+I  N   +          +  A  LA +  
Sbjct: 225 KGYTGSINLYV----------APFTEIQMQIIKNCREDELTIIMRRFMMRVACKLAEKYN 274

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           + ++  G      +          + +E  I     +   V  PL+ + K +    A+ I
Sbjct: 275 VDSVTTGESVGQVAS---------QTMEGLIVSNDVADRPVFRPLIAMDKVDIMDEARKI 325

Query: 188 GGQDLVNLILEE 199
           G  +   L  E+
Sbjct: 326 GTYETSILPYED 337


>gi|325694399|gb|EGD36310.1| thiamine biosynthesis protein ThiI [Streptococcus sanguinis SK150]
          Length = 404

 Score = 84.6 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 53/192 (27%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +    G
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREDRG 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             V  P++ + K E   +A+ I
Sbjct: 281 GQVIINGESLGQVASQTIESMQAINAVTNT---------PVIRPVVTMDKLEIIDIAEKI 331

Query: 188 GGQDLVNLILEE 199
               +     E+
Sbjct: 332 DTFQISIQPFED 343


>gi|281490922|ref|YP_003352902.1| thiamine biosynthesis AtP pyrophosphatase [Lactococcus lactis
           subsp. lactis KF147]
 gi|281374680|gb|ADA64200.1| Thiamine biosynthesis ATP pyrophosphatase [Lactococcus lactis
           subsp. lactis KF147]
          Length = 406

 Score = 84.2 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 53/187 (28%), Gaps = 25/187 (13%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           L+ SGG DS      AL R   +E + F                 KK  +L  K     G
Sbjct: 184 LMLSGGIDSPVAGYLALKRGVEIEAVHF------ASPPYTSPGALKKAKDLAAKLTVFGG 237

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
               + +              +  +I+        +       +     +    G   I+
Sbjct: 238 SITFIEVPF----------TEIQEEIKAKAPQAYLMTITRRFMMRVVDRVREERGGKVII 287

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
            G      +         I  +             V  P++ + K E  ++A+ I   +L
Sbjct: 288 NGESLGQVASQTLGSMSAINEVTNT---------PVIRPVVTMDKNEIIEIAEKIDTFNL 338

Query: 193 VNLILEE 199
             L  E+
Sbjct: 339 SILPFED 345


>gi|15672361|ref|NP_266535.1| hypothetical protein L183112 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|20140769|sp|Q9CII1|THII_LACLA RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|12723251|gb|AAK04477.1|AE006275_1 hypothetical protein L183112 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|326405955|gb|ADZ63026.1| thiamine biosynthesis AtP pyrophosphatase [Lactococcus lactis
           subsp. lactis CV56]
          Length = 406

 Score = 84.2 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 53/187 (28%), Gaps = 25/187 (13%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           L+ SGG DS      AL R   +E + F                 KK  +L  K     G
Sbjct: 184 LMLSGGIDSPVAGYLALKRGVEIEAVHF------ASPPYTSPGALKKAKDLAAKLTVFGG 237

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
               + +              +  +I+        +       +     +    G   I+
Sbjct: 238 SITFIEVPF----------TEIQEEIKAKAPQAYLMTITRRFMMRVVDRVREERGGKVII 287

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
            G      +         I  +             V  P++ + K E  ++A+ I   +L
Sbjct: 288 NGESLGQVASQTLGSMSAINEVTNT---------PVIRPVVTMDKNEIIEIAEKIDTFNL 338

Query: 193 VNLILEE 199
             L  E+
Sbjct: 339 SILPFED 345


>gi|114570862|ref|YP_757542.1| hypothetical protein Mmar10_2312 [Maricaulis maris MCS10]
 gi|114341324|gb|ABI66604.1| conserved hypothetical protein [Maricaulis maris MCS10]
          Length = 439

 Score = 84.2 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 61/225 (27%), Gaps = 21/225 (9%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           + LFSGG DS       +    R   +S     R+             +           
Sbjct: 149 VCLFSGGMDSLIGAIDRIADGHRPLLVS-----RSTRGDGGYQTYLHGM--------LPE 195

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
                +   I G++     T+  ++              R     +    +     I+  
Sbjct: 196 VPSLRINDDIRGELQGEPSTRTRSIVFLALAACAASAISRLHNDSIVPLIIPENGFISLN 255

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
                    +      H    +   AI   +     +  P  +  K E  +  +D   Q 
Sbjct: 256 PPLTVRRIGALSTRTVHPHFISSLQAIFDEVGIPAAIENPYFFKTKGEALRECRD---QP 312

Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           LV  ++ ++ +C      K   +   C  C  C +R+  +     
Sbjct: 313 LVTKLISKTTSC-----GKWKRYWQQCGRCVPCLIRRSAFHAAGI 352


>gi|323127048|gb|ADX24345.1| thiamine biosynthesis protein ThiI [Streptococcus dysgalactiae
           subsp. equisimilis ATCC 12394]
          Length = 404

 Score = 84.2 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 55/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                  K   L  + 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGLDIEAVHF------ASPPYTSPGALAKAQNLTRRL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I++       +       +     +  +  
Sbjct: 231 TRFGGNIQFIEVPF----------TEIQEEIKNKAPEAYLMTLTRRFMMRITDAIREQRH 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+ +           +  P++ + K E  ++AQ I
Sbjct: 281 ALVIVNGESLGQVASQTLESMQAINAVTST---------PIIRPVVTMDKLEIIEMAQAI 331

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 332 DTFDISIQPFED 343


>gi|125623264|ref|YP_001031747.1| thiamine biosynthesis protein thiI [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|189030636|sp|A2RIA6|THII_LACLM RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|124492072|emb|CAL97000.1| thiamine biosynthesis protein thiI [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|300070014|gb|ADJ59414.1| thiamine biosynthesis protein ThiI [Lactococcus lactis subsp.
           cremoris NZ9000]
          Length = 406

 Score = 84.2 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 53/187 (28%), Gaps = 25/187 (13%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           L+ SGG DS      AL R   +E + F                 KK  +L  K     G
Sbjct: 184 LMLSGGIDSPVAGYLALKRGVEIEAVHF------ASPPYTSPGALKKAKDLAAKLTVFGG 237

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
               + +              +  +I+        +       +     +    G   I+
Sbjct: 238 AITFIEVPF----------TEIQEEIKAKAPQAYLMTITRRFMMRVVDRVREERGGKVII 287

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
            G      +         I  +             V  P++ + K E  ++A+ I   +L
Sbjct: 288 NGESLGQVASQTLGSMSAINEVTNT---------PVIRPVVTMDKNEIIEIAEKIDTFNL 338

Query: 193 VNLILEE 199
             L  E+
Sbjct: 339 SILPFED 345


>gi|323442980|gb|EGB00602.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus O46]
          Length = 402

 Score = 84.2 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                ++K++EL     +
Sbjct: 174 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHFH------SPPFTSDQAKEKVIELTRILAE 227

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              +  ++     P   +     + +  A  L +++G  
Sbjct: 228 RVGPIKLHIVPF----------TELQKQVNKVVHPRYTMTSTRRMMMRVADKLVHQIGAL 277

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + + +   +   +   V  PL+   K E    +++IG 
Sbjct: 278 AIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGT 328

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 329 FETSIQPFED 338


>gi|323440740|gb|EGA98449.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus O11]
          Length = 402

 Score = 84.2 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                ++K++EL     +
Sbjct: 174 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHFH------SPPFTSDQAKEKVIELTRILAE 227

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              +  ++     P   +     + +  A  L +++G  
Sbjct: 228 RVGPIKLHIVPF----------TELQKQVNKVVHPRYTMTSTRRMMMRVADKLVHQIGAL 277

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + + +   +   +   V  PL+   K E    +++IG 
Sbjct: 278 AIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGT 328

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 329 FETSIQPFED 338


>gi|298694984|gb|ADI98206.1| probable thiamine biosynthesis protein [Staphylococcus aureus
           subsp. aureus ED133]
          Length = 407

 Score = 84.2 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                ++K++EL     +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHFH------SPPFTSDQAKEKVIELTRILAE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              +  ++     P   +     + +  A  L +++G  
Sbjct: 233 RVGPIKLHIVPF----------TELQKQVNKVVHPRYTMTSTRRMMMRVADKLVHQIGAL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + + +   +   +   V  PL+   K E    +++IG 
Sbjct: 283 AIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 FETSIQPFED 343


>gi|269203353|ref|YP_003282622.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
           aureus ED98]
 gi|262075643|gb|ACY11616.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
           aureus ED98]
          Length = 407

 Score = 84.2 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                ++K++EL     +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHFH------SPPFTSDQAKEKVIELTRILAE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              +  ++     P   +     + +  A  L +++G  
Sbjct: 233 RVGPIKLHIVPF----------TELQKQVNKVVHPRYTMTSTRRMMMRVADKLVHQIGAL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + + +   +   +   V  PL+   K E    +++IG 
Sbjct: 283 AIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 FETSIQPFED 343


>gi|258450890|ref|ZP_05698943.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus A5948]
 gi|257861426|gb|EEV84234.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus A5948]
          Length = 407

 Score = 84.2 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                ++K++EL     +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHFH------SPPFTSDQAKEKVIELTRILAE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              +  ++     P   +     + +  A  L +++G  
Sbjct: 233 RVGPIKLHIVPF----------TELQKQVNKVVHPRYTMTSTRRMMMRVADKLVHQIGAL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + + +   +   +   V  PL+   K E    +++IG 
Sbjct: 283 AIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 FETSIQPFED 343


>gi|258424130|ref|ZP_05687012.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus A9635]
 gi|257845751|gb|EEV69783.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus A9635]
          Length = 407

 Score = 84.2 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                ++K++EL     +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHFH------SPPFTSDQAKEKVIELTRILAE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              +  ++     P   +     + +  A  L +++G  
Sbjct: 233 RVGPIKLHIVPF----------TELQKQVNKVVHPRYTMTSTRRMMMRVADKLVHQIGAL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + + +   +   +   V  PL+   K E    +++IG 
Sbjct: 283 AIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 FETSIQPFED 343


>gi|253734501|ref|ZP_04868666.1| thiamine biosynthesis protein [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|297207573|ref|ZP_06924008.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|253727555|gb|EES96284.1| thiamine biosynthesis protein [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|296887590|gb|EFH26488.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus ATCC 51811]
          Length = 407

 Score = 84.2 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                ++K++EL     +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHFH------SPPFTSDQAKEKVIELTRILAE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              +  ++     P   +     + +  A  L +++G  
Sbjct: 233 RVGPIKLHIVPF----------TELQKQVNKVVHPRYTMTSTRRMMMRVADKLVHQIGAL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + + +   +   +   V  PL+   K E    +++IG 
Sbjct: 283 AIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 FETSIQPFED 343


>gi|253732365|ref|ZP_04866530.1| thiamine biosynthesis protein [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253723887|gb|EES92616.1| thiamine biosynthesis protein [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 407

 Score = 84.2 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                ++K++EL     +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHFH------SPPFTSDQAKEKVIELTRILAE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              +  ++     P   +     + +  A  L +++G  
Sbjct: 233 RVGPIKLHIVPF----------TELQKQVNKVVHPRYTMTSTRRMMMRVADKLVHQIGAL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + + +   +   +   V  PL+   K E    +++IG 
Sbjct: 283 AIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 FETSIQPFED 343


>gi|82751303|ref|YP_417044.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus RF122]
 gi|123547916|sp|Q2YTF0|THII_STAAB RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|82656834|emb|CAI81263.1| probable thiamine biosynthesis protein [Staphylococcus aureus
           RF122]
 gi|302333380|gb|ADL23573.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
           aureus JKD6159]
          Length = 407

 Score = 84.2 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                ++K++EL     +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHFH------SPPFTSDQAKEKVIELTRILAE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              +  ++     P   +     + +  A  L +++G  
Sbjct: 233 RVGPIKLHIVPF----------TELQKQVNKVVHPRYTMTSTRRMMMRVADKLVHQIGAL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + + +   +   +   V  PL+   K E    +++IG 
Sbjct: 283 AIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 FETSIQPFED 343


>gi|57652013|ref|YP_186598.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
           aureus COL]
 gi|87160466|ref|YP_494355.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88195524|ref|YP_500329.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|151221821|ref|YP_001332643.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|161509929|ref|YP_001575588.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|221142350|ref|ZP_03566843.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|262049029|ref|ZP_06021907.1| hypothetical protein SAD30_2234 [Staphylococcus aureus D30]
 gi|262051801|ref|ZP_06024018.1| hypothetical protein SA930_0463 [Staphylococcus aureus 930918-3]
 gi|282924405|ref|ZP_06332078.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus A9765]
 gi|284024762|ref|ZP_06379160.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
           aureus 132]
 gi|294849876|ref|ZP_06790615.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus A9754]
 gi|304380693|ref|ZP_07363364.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus ATCC BAA-39]
 gi|71153653|sp|Q5HF59|THII_STAAC RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|122539305|sp|Q2FXL1|THII_STAA8 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|123485452|sp|Q2FG23|THII_STAA3 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|189030659|sp|A6QHP9|THII_STAAE RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|189030660|sp|A8Z2N1|THII_STAAT RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|57286199|gb|AAW38293.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
           aureus COL]
 gi|87126440|gb|ABD20954.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|87203082|gb|ABD30892.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|150374621|dbj|BAF67881.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|160368738|gb|ABX29709.1| thiamine biosynthesis protein [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|259160295|gb|EEW45322.1| hypothetical protein SA930_0463 [Staphylococcus aureus 930918-3]
 gi|259162846|gb|EEW47410.1| hypothetical protein SAD30_2234 [Staphylococcus aureus D30]
 gi|269941194|emb|CBI49582.1| putative thiamine biosynthesis protein [Staphylococcus aureus
           subsp. aureus TW20]
 gi|282592906|gb|EFB97909.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus A9765]
 gi|294823215|gb|EFG39645.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus A9754]
 gi|302751541|gb|ADL65718.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|304340800|gb|EFM06729.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus ATCC BAA-39]
 gi|315197182|gb|EFU27521.1| thiamine biosynthesis protein [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320141658|gb|EFW33493.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus MRSA131]
 gi|329314388|gb|AEB88801.1| Probable tRNA sulfurtransferase [Staphylococcus aureus subsp.
           aureus T0131]
 gi|329727015|gb|EGG63472.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus 21189]
          Length = 407

 Score = 84.2 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                ++K++EL     +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHFH------SPPFTSDQAKEKVIELTRILAE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              +  ++     P   +     + +  A  L +++G  
Sbjct: 233 RVGPIKLHIVPF----------TELQKQVNKVVHPRYTMTSTRRMMMRVADKLVHQIGAL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + + +   +   +   V  PL+   K E    +++IG 
Sbjct: 283 AIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 FETSIQPFED 343


>gi|49486540|ref|YP_043761.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|56749704|sp|Q6G8L2|THII_STAAS RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|49244983|emb|CAG43444.1| putative thiamine biosynthesis protein [Staphylococcus aureus
           subsp. aureus MSSA476]
          Length = 407

 Score = 84.2 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                ++K++EL     +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHFH------SPPFTSDQAKEKVIELTRILAE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              +  ++     P   +     + +  A  L +++G  
Sbjct: 233 RVGPIKLHIVPF----------TELQKQVNKVVHPRYTMTSTRRMMMRVADKLVHQIGAL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + + +   +   +   V  PL+   K E    +++IG 
Sbjct: 283 AIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 FETSIQPFED 343


>gi|21283387|ref|NP_646475.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
           aureus MW2]
 gi|300911654|ref|ZP_07129098.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus TCH70]
 gi|23822241|sp|Q8NW49|THII_STAAW RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|21204827|dbj|BAB95523.1| MW1658 [Staphylococcus aureus subsp. aureus MW2]
 gi|300887075|gb|EFK82276.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus TCH70]
          Length = 407

 Score = 84.2 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                ++K++EL     +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHFH------SPPFTSDQAKEKVIELTRILAE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              +  ++     P   +     + +  A  L +++G  
Sbjct: 233 RVGPIKLHIVPF----------TELQKQVNKVVHPRYTMTSTRRMMMRVADKLVHQIGAL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + + +   +   +   V  PL+   K E    +++IG 
Sbjct: 283 AIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 FETSIQPFED 343


>gi|15927292|ref|NP_374825.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
           aureus N315]
 gi|20140738|sp|Q99TE8|THII_STAAN RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|13701510|dbj|BAB42804.1| SA1537 [Staphylococcus aureus subsp. aureus N315]
          Length = 407

 Score = 84.2 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                ++K++EL     +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHFH------SPPFTSDQAKEKVIELTRILAE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              +  ++     P   +     + +  A  L +++G  
Sbjct: 233 RVGPIKLHIVPF----------TELQKQVNKVVHPRYTMTSTRRMMMRVADKLVHQIGAL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + + +   +   +   V  PL+   K E    +++IG 
Sbjct: 283 AIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 FETSIQPFED 343


>gi|15924705|ref|NP_372239.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|156980032|ref|YP_001442291.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
           aureus Mu3]
 gi|253315110|ref|ZP_04838323.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|255006500|ref|ZP_05145101.2| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|258438282|ref|ZP_05689566.1| thiamine biosynthesis protein [Staphylococcus aureus A9299]
 gi|258443740|ref|ZP_05692079.1| thiamine biosynthesis protein [Staphylococcus aureus A8115]
 gi|282893209|ref|ZP_06301443.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus A8117]
 gi|296276446|ref|ZP_06858953.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
           aureus MR1]
 gi|20140679|sp|Q931P5|THII_STAAM RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|189030656|sp|A7X3E5|THII_STAA1 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|14247487|dbj|BAB57877.1| probable thiamine biosynthesis protein [Staphylococcus aureus
           subsp. aureus Mu50]
 gi|156722167|dbj|BAF78584.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
 gi|257848326|gb|EEV72317.1| thiamine biosynthesis protein [Staphylococcus aureus A9299]
 gi|257851146|gb|EEV75089.1| thiamine biosynthesis protein [Staphylococcus aureus A8115]
 gi|282764527|gb|EFC04653.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus A8117]
 gi|329733109|gb|EGG69446.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus 21193]
          Length = 407

 Score = 84.2 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                ++K++EL     +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHFH------SPPFTSDQAKEKVIELTRILAE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              +  ++     P   +     + +  A  L +++G  
Sbjct: 233 RVGPIKLHIVPF----------TELQKQVNKVVHPRYTMTSTRRMMMRVADKLVHQIGAL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + + +   +   +   V  PL+   K E    +++IG 
Sbjct: 283 AIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 FETSIQPFED 343


>gi|320546992|ref|ZP_08041293.1| thiamine biosynthesis protein ThiI [Streptococcus equinus ATCC
           9812]
 gi|320448394|gb|EFW89136.1| thiamine biosynthesis protein ThiI [Streptococcus equinus ATCC
           9812]
          Length = 404

 Score = 84.2 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 53/188 (28%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +L+ SGG DS      AL R   +E + F                 KK  +L  K     
Sbjct: 181 MLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKLTKFG 234

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G    + +              +  +I++       +       +     +        I
Sbjct: 235 GNIDFIEVPF----------TEIQEEIKEKAPEAYLMTLTRRFMMRITDRIREERNGLVI 284

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           + G      +         I A+             +  P++ + K E   +AQ I   D
Sbjct: 285 INGESLGQVASQTLESMRAINAVTAT---------PIIRPVVTMDKLEIIDIAQKIDTFD 335

Query: 192 LVNLILEE 199
           +     E+
Sbjct: 336 ISIQPFED 343


>gi|306831631|ref|ZP_07464789.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
 gi|325978535|ref|YP_004288251.1| putative thiamine biosynthesis protein thiI [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
 gi|304426416|gb|EFM29530.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
 gi|325178463|emb|CBZ48507.1| putative thiamine biosynthesis protein thiI [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 404

 Score = 84.2 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 53/188 (28%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +L+ SGG DS      AL R   +E + F                 KK  +L  K     
Sbjct: 181 MLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKLTKFG 234

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G    + +              +  +I++       +       +     +        I
Sbjct: 235 GNIDFIEVPF----------TEIQEEIKEKAPEAYLMTLTRRFMMRITDRIREERNGLVI 284

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           + G      +         I A+             +  P++ + K E   +AQ I   D
Sbjct: 285 INGESLGQVASQTLESMRAINAVTAT---------PIIRPVVTMDKLEIIDIAQKIDTFD 335

Query: 192 LVNLILEE 199
           +     E+
Sbjct: 336 ISIQPFED 343


>gi|171779874|ref|ZP_02920778.1| hypothetical protein STRINF_01661 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281222|gb|EDT46657.1| hypothetical protein STRINF_01661 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 404

 Score = 84.2 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 53/188 (28%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +L+ SGG DS      AL R   +E + F                 KK  +L  K     
Sbjct: 181 MLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKLTKFG 234

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G    + +              +  +I++       +       +     +        I
Sbjct: 235 GNIDFIEVPF----------TEIQEEIKEKAPEAYLMTLTRRFMMRITDRIREERNGLVI 284

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           + G      +         I A+             +  P++ + K E   +AQ I   D
Sbjct: 285 INGESLGQVASQTLESMRAINAVTAT---------PIIRPVVTMDKLEIIDIAQKIDTFD 335

Query: 192 LVNLILEE 199
           +     E+
Sbjct: 336 ISIQPFED 343


>gi|229579382|ref|YP_002837780.1| ExsB family protein [Sulfolobus islandicus Y.G.57.14]
 gi|229581857|ref|YP_002840256.1| ExsB family protein [Sulfolobus islandicus Y.N.15.51]
 gi|228010096|gb|ACP45858.1| ExsB family protein [Sulfolobus islandicus Y.G.57.14]
 gi|228012573|gb|ACP48334.1| ExsB family protein [Sulfolobus islandicus Y.N.15.51]
          Length = 244

 Score = 84.2 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 66/231 (28%), Gaps = 45/231 (19%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++  +GG DS+    +  D++  +      YG   ++         + + EL  K
Sbjct: 1   MVEEAIIQLTGGIDSTVLAYYLKDKYV-LHGTFIYYGYPPQIRE------LELVKELSKK 53

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                    I+  +            ++   I+                        + +
Sbjct: 54  LD---VPLKIIDFSSYIKSFDLPPIDSIQYIIK----------------------YQFVI 88

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I          +       + +    +     +       V  P   + K E  KL  +
Sbjct: 89  EILASFSAYPNLNTMFVGWLKDEWSNKMSILKGIESLMGFKVMAPFHTMVKSEVIKLGNE 148

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +G      +   ++H+C +  +         C  C  C  R++ + E K K
Sbjct: 149 LG------VDFTKTHSCIVSGK-------MHCGICMPCRSRRRAFEEAKVK 186


>gi|320449234|ref|YP_004201330.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermus
           scotoductus SA-01]
 gi|320149403|gb|ADW20781.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermus
           scotoductus SA-01]
          Length = 411

 Score = 84.2 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 51/190 (26%), Gaps = 27/190 (14%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL-ECRLCVRKKIVELMPK 66
           +   + L SGG DS       + R   V  + F        +  E    + +++     +
Sbjct: 176 SGKVVALLSGGIDSPVAAYRLMRRGAEVVLVHFHPFPLLSGQSREKAKAIAERLARFQHR 235

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               L                      V  +I         V       L  A  +A   
Sbjct: 236 ITLHLVPF-----------------SEVQRQIILEAPKAYRVVLYRRYMLRIAEAIAKEE 278

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   +  G      +          + +E    +   + + V  PL+   K E    A+ 
Sbjct: 279 GALALATGDSLGQVAS---------QTLENLHVVNQAATLPVFRPLIGFDKVEIKAEAER 329

Query: 187 IGGQDLVNLI 196
           IG   +  L 
Sbjct: 330 IGTYAISILP 339


>gi|312867479|ref|ZP_07727688.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           parasanguinis F0405]
 gi|311097180|gb|EFQ55415.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           parasanguinis F0405]
          Length = 406

 Score = 84.2 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 179 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAHDLTRKL 232

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +    G
Sbjct: 233 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREVRG 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             V  P++ + K E   +AQ I
Sbjct: 283 GLVIINGESLGQVASQTLESMQAINAVTNT---------PVIRPVVTMDKLEIIDIAQAI 333

Query: 188 GGQDLVNLILEE 199
              ++     E+
Sbjct: 334 DTFEISIQPFED 345


>gi|148997816|ref|ZP_01825380.1| hypothetical protein CGSSp11BS70_02874 [Streptococcus pneumoniae
           SP11-BS70]
 gi|149011370|ref|ZP_01832617.1| hypothetical protein CGSSp19BS75_08167 [Streptococcus pneumoniae
           SP19-BS75]
 gi|168575048|ref|ZP_02721011.1| NADPH-dependent 7-cyano-7-deazaguanine reductase (nadph-dependent
           nitrile oxidoreductase) [Streptococcus pneumoniae
           MLV-016]
 gi|307068385|ref|YP_003877351.1| hypothetical protein SPAP_1765 [Streptococcus pneumoniae AP200]
 gi|147756315|gb|EDK63357.1| hypothetical protein CGSSp11BS70_02874 [Streptococcus pneumoniae
           SP11-BS70]
 gi|147764360|gb|EDK71291.1| hypothetical protein CGSSp19BS75_08167 [Streptococcus pneumoniae
           SP19-BS75]
 gi|183578774|gb|EDT99302.1| NADPH-dependent 7-cyano-7-deazaguanine reductase (nadph-dependent
           nitrile oxidoreductase) [Streptococcus pneumoniae
           MLV-016]
 gi|306409922|gb|ADM85349.1| hypothetical protein SPAP_1765 [Streptococcus pneumoniae AP200]
          Length = 177

 Score = 84.2 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 10/125 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WA+  ++ VE ++F YGQR+ +E++    + K+       
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWAMQHYETVEAVTFAYGQRHHLEIQIAREIAKEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL +++LG I+       + +    + L     P +  +F        +  
Sbjct: 57  -----IRHHILDMSLLGQITAQPDFATIHISYIPDKLCVESKPLKLYLFSYRNHGDFHEN 111

Query: 127 GITNI 131
            I  I
Sbjct: 112 CINTI 116


>gi|222087294|ref|YP_002545831.1| hypothetical protein Arad_4114 [Agrobacterium radiobacter K84]
 gi|221724742|gb|ACM27898.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 421

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 58/222 (26%), Gaps = 11/222 (4%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           + LFSGG DS      +L+  + +  +S      +  E        +    L   +K S 
Sbjct: 123 VSLFSGGLDSLIGAIDSLNAGETLLLVS------HAGEGLVSKSQEQCFDGLKAAYKSSA 176

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
            +   + +     +     +++                G  +            L   N+
Sbjct: 177 FDRLRVWMNFDSGLVEDVGSEDTTRGRSFLFFSLGLAAGTALGRDFVLKVPENGLIAPNV 236

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
                    +      H    A    +   +     V  P     K E            
Sbjct: 237 P-LDQLRLGALSTRTTHPFYMARWNDLLRALGVMGKVENPYWDKTKGEMVAQCAK---PA 292

Query: 192 LVNLILEESHTCYLGKRDKRYEWGY-GCNSCPACYLRQKGWM 232
           L+  +   S +C    + +  +     C  C  C +R+    
Sbjct: 293 LLKQLAPLSLSCSSPAKGRWTKKPQGHCGYCLPCLIRRASLR 334


>gi|148268194|ref|YP_001247137.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150394262|ref|YP_001316937.1| thiamine biosynthesis protein ThiI [Staphylococcus aureus subsp.
           aureus JH1]
 gi|257794099|ref|ZP_05643078.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus A9781]
 gi|258415803|ref|ZP_05682074.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus A9763]
 gi|258421960|ref|ZP_05684880.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus A9719]
 gi|258445951|ref|ZP_05694127.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus A6300]
 gi|258448369|ref|ZP_05696486.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus A6224]
 gi|258454151|ref|ZP_05702122.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus A5937]
 gi|282927844|ref|ZP_06335455.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus A10102]
 gi|295406025|ref|ZP_06815833.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus A8819]
 gi|297245049|ref|ZP_06928926.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus A8796]
 gi|189030657|sp|A6U2I2|THII_STAA2 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|189030658|sp|A5ITN8|THII_STAA9 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|147741263|gb|ABQ49561.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus JH9]
 gi|149946714|gb|ABR52650.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus JH1]
 gi|257788071|gb|EEV26411.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus A9781]
 gi|257839396|gb|EEV63869.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus A9763]
 gi|257842004|gb|EEV66433.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus A9719]
 gi|257855193|gb|EEV78132.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus A6300]
 gi|257858337|gb|EEV81222.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus A6224]
 gi|257863603|gb|EEV86360.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus A5937]
 gi|282590354|gb|EFB95433.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus A10102]
 gi|285817397|gb|ADC37884.1| Thiamine biosynthesis protein thiI [Staphylococcus aureus 04-02981]
 gi|294969022|gb|EFG45043.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus A8819]
 gi|297178129|gb|EFH37377.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus A8796]
 gi|312830093|emb|CBX34935.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|315130649|gb|EFT86635.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus CGS03]
 gi|329727130|gb|EGG63586.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus 21172]
          Length = 407

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                ++K++EL     +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHFH------SPPFTSDQAKEKVIELTRILAE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              +  ++     P   +     + +  A  L +++G  
Sbjct: 233 RVGPIKLHIVPF----------TELQKRVNKVVHPRYTMTSTRRMMMRVADKLVHQIGAL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + + +   +   +   V  PL+   K E    +++IG 
Sbjct: 283 AIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 FETSIQPFED 343


>gi|22537519|ref|NP_688370.1| thiamine biosynthesis protein ThiI [Streptococcus agalactiae
           2603V/R]
 gi|44888491|sp|Q8DYV1|THII_STRA5 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|22534400|gb|AAN00243.1|AE014255_1 thiamine biosynthesis protein ThiI [Streptococcus agalactiae
           2603V/R]
          Length = 404

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 53/192 (27%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAHDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREDRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             +  P++ + K E   +AQ I
Sbjct: 281 GLVIINGESLGQVASQTLESMQAINAVTAT---------PIIRPVVTMDKLEIIDIAQKI 331

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 332 DTFDISIQPFED 343


>gi|76797722|ref|ZP_00779990.1| thiamine biosynthesis protein ThiI [Streptococcus agalactiae
           18RS21]
 gi|77414613|ref|ZP_00790753.1| thiamine biosynthesis protein ThiI [Streptococcus agalactiae 515]
 gi|76586946|gb|EAO63436.1| thiamine biosynthesis protein ThiI [Streptococcus agalactiae
           18RS21]
 gi|77159326|gb|EAO70497.1| thiamine biosynthesis protein ThiI [Streptococcus agalactiae 515]
          Length = 384

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 53/192 (27%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 157 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAHDLTRKL 210

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 211 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREDRN 260

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             +  P++ + K E   +AQ I
Sbjct: 261 GLVIINGESLGQVASQTLESMQAINAVTAT---------PIIRPVVTMDKLEIIDIAQKI 311

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 312 DTFDISIQPFED 323


>gi|269928591|ref|YP_003320912.1| thiamine biosynthesis/tRNA modification protein ThiI [Sphaerobacter
           thermophilus DSM 20745]
 gi|269787948|gb|ACZ40090.1| thiamine biosynthesis/tRNA modification protein ThiI [Sphaerobacter
           thermophilus DSM 20745]
          Length = 404

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 59/189 (31%), Gaps = 25/189 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   ++L SGG DS   +   + R   V  L              R    +K+VEL    
Sbjct: 179 SGRVVVLMSGGFDSPVAVYRMMKRGCEVTLLHCH------AYPFVRSTSIEKVVELAQHL 232

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                   ++ + I       ++     +           V     + +  A  +A R G
Sbjct: 233 GRHQPGMRLVIVPIGQAQRQIAIATEPEI----------RVVLYRRLMMRIAEAIAEREG 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      S          + ++    +G    + +  PL+   K E    A+ I
Sbjct: 283 AKAIVTGESLGQVSS---------QTLDNLRAIGAAVKLPILRPLIGFDKEEILAEAKRI 333

Query: 188 GGQDLVNLI 196
           G + +  + 
Sbjct: 334 GTEPISRVP 342


>gi|309800145|ref|ZP_07694333.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           infantis SK1302]
 gi|308116232|gb|EFO53720.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           infantis SK1302]
          Length = 309

 Score = 84.2 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 53/192 (27%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 82  SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 135

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 136 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREVRK 185

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             +  P++ + K E   +AQ I
Sbjct: 186 GLVIINGESLGQVASQTLESMQAINAVTNT---------PIIRPVVTMDKLEIIDIAQKI 236

Query: 188 GGQDLVNLILEE 199
              ++     E+
Sbjct: 237 DTFEISIQPFED 248


>gi|320143812|gb|EFW35585.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Staphylococcus aureus subsp. aureus MRSA177]
          Length = 407

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             LL+ SGG DS       + R   +E + F                ++K++EL     +
Sbjct: 179 KTLLMLSGGIDSPVAGMEVMRRGVTIEAIHFH------SPPFTSDQAKEKVIELTRILAE 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   +  +              +  ++     P   +     + +  A  L +++G  
Sbjct: 233 RVGPIKLHIVPF----------TELQKQVNKVLHPRYTMTSTRRMMMRVADKLVHQIGAL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + + +   +   +   V  PL+   K E    +++IG 
Sbjct: 283 AIVNGENLGQVAS---------QTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGT 333

Query: 190 QDLVNLILEE 199
            +      E+
Sbjct: 334 FETSIQPFED 343


>gi|288932377|ref|YP_003436437.1| thiamine biosynthesis/tRNA modification protein ThiI [Ferroglobus
           placidus DSM 10642]
 gi|288894625|gb|ADC66162.1| thiamine biosynthesis/tRNA modification protein ThiI [Ferroglobus
           placidus DSM 10642]
          Length = 369

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 63/192 (32%), Gaps = 26/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +   SGG DS      A+ R   V  + F     +         VRKKI++L  K 
Sbjct: 160 SGKVVAQISGGIDSPVAAFLAMKRGAEVIAVHFFNQTLH------SPQVRKKILDLAEKL 213

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                E H + L                +           V  R+++ +     +A +  
Sbjct: 214 S----EFHKVKL-----YMVPFEEVQREIIRVIPAKYRMIVYRRSMMRMSN--VIAKKEN 262

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G   +  +         I +            + V  PL+   K ET ++A+ I
Sbjct: 263 AKAIVTGDSLSQVASQTLDNIRVIYSASE---------LPVLPPLIGFDKEETIEIAKKI 313

Query: 188 GGQDLVNLILEE 199
           G  ++  L  E+
Sbjct: 314 GTYEISILPYED 325


>gi|10957550|ref|NP_051680.1| hypothetical protein DR_C0007 [Deinococcus radiodurans R1]
 gi|6460979|gb|AAF12682.1|AE001827_20 hypothetical protein DR_C0007 [Deinococcus radiodurans R1]
          Length = 423

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 60/226 (26%), Gaps = 20/226 (8%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            + L SGG DS   +   +        +S    Q    +   +  +   +          
Sbjct: 139 CVALLSGGLDSLVGMIDLVAEGHNPLAVS----QLVAGDAAKQREIATDLGRTTH----- 189

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           L  +H       G+ S  S T              T       + +         L    
Sbjct: 190 LQLNHAAECPTPGEDSQRSRTLIFLAYAVLAATATTRFQQARAVPIYINENGFIALNPPL 249

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
             + +               ++A+  A+ L     V +  P     K E          Q
Sbjct: 250 TPMRIGSLSTRTAHPVFLQQLQAVLQAVGLN----VALINPYALKTKGEMLTECA---NQ 302

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            +++     + +C       R      C  C  C +R+  ++ + +
Sbjct: 303 TVLSRWASATTSC----GRYRRFGYKHCGRCIPCQVRRAAFLAWGQ 344


>gi|329117240|ref|ZP_08245957.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           parauberis NCFD 2020]
 gi|326907645|gb|EGE54559.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           parauberis NCFD 2020]
          Length = 404

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 55/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  EL  + 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVEIEAVHF------ASPPYTSPGALKKAQELTRRL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+D       +       +     +     
Sbjct: 231 VRFGGNIQFIEVPF----------TEIQEEIKDKAPEAYLMTLTRRFMMRITDAIRESRS 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+ T           V  P++ + K E   +AQ I
Sbjct: 281 GLVIINGESLGQVASQTLESMQAINAVTTT---------PVIRPVVTMDKLEIIDIAQAI 331

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 332 DTFDISIQPFED 343


>gi|255021579|ref|ZP_05293622.1| Archaeosine biosynthesis protein queC [Acidithiobacillus caldus
           ATCC 51756]
 gi|254968967|gb|EET26486.1| Archaeosine biosynthesis protein queC [Acidithiobacillus caldus
           ATCC 51756]
          Length = 206

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 53/236 (22%), Positives = 89/236 (37%), Gaps = 36/236 (15%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + +   +LLL SGG +S T L+ A      +     DYGQR   E        K++  L 
Sbjct: 1   MPQPERSLLLCSGGVESFT-LTHAFGTDSGLYLFFLDYGQRAAAEEW------KRVQNLA 53

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +    E     L   GD          A+        +   P RN++ +  AA +A 
Sbjct: 54  RNLRL---ERERFDLRDFGD----------AVGRLRPQRYHVPTPHRNLLAVAAAANVAE 100

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            LG   +V+G    D     +     + A+   ++      + +  PL   +K    +L 
Sbjct: 101 SLGRNTVVLGTTADDGRTDRNANRAFLSALAATLSSS---GLYLALPLAQYRKAAVIRLG 157

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
           QD+G      +  E S++C +G           C  CP C  R++ + E    ++D
Sbjct: 158 QDLG------VPWEMSYSCIVGYEA-------QCGRCPQCIRRREAFREAGLSHRD 200


>gi|325860469|ref|ZP_08173580.1| hypothetical protein HMPREF9303_0833 [Prevotella denticola CRIS
           18C-A]
 gi|325481996|gb|EGC85018.1| hypothetical protein HMPREF9303_0833 [Prevotella denticola CRIS
           18C-A]
          Length = 430

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/251 (11%), Positives = 68/251 (27%), Gaps = 28/251 (11%)

Query: 2   NDIIKKAPSAL-----LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
           ++++ K+   L      + SGG DS    +  L    +   +  +Y              
Sbjct: 132 SNLMGKSKQTLAASDFCMLSGGLDSFIGATDLLTNGKKPIFVG-NYNGG----------- 179

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
            K +     K  + L +     +        S            + +  +         +
Sbjct: 180 -KGVSVYQNKVINLLSDHFGYDVNRFFQFYASPKKGKEDTTRSRSLMFFSHAILLASGMV 238

Query: 117 VFAATLAYRLG-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
                     G I+  +        S      H    ++   +   +E  +T+  P  + 
Sbjct: 239 NPVTLYVPENGVISLNIPLTIHRSGSLSTRTTHPYFMSMLQQLLNNLELPITIINPYQFK 298

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGY--GCNSCPACYLRQKGWME 233
            K E  +   D   +  +   ++ + +C      +         C  C  C +R+     
Sbjct: 299 TKGEMVRDCLD---RTFLENNIQWTMSCSHPDLGRYSGETEPSHCGCCLPCTIRRAAIKF 355

Query: 234 FKEK----YQD 240
                   Y+D
Sbjct: 356 AGINDASTYRD 366


>gi|251778897|ref|ZP_04821817.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
 gi|243083212|gb|EES49102.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
          Length = 385

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 57/193 (29%), Gaps = 25/193 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              S +L+ SGG DS         R   +  + +                + K+ +L   
Sbjct: 174 MNGSTMLMLSGGIDSPVAGYLMAKRGVELNCVYYH------SHPYTSERAKDKVKDLAKI 227

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + ++  +              + M I D    +          +  A  +A   
Sbjct: 228 LASYTEKINLYVVPF----------TEIQMAILDKCREDELTIIMRRFMMRVACKIAEEK 277

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI ++  G      +          + +E  I     +   V  PL+ + K +   +A+ 
Sbjct: 278 GIQSVTSGESIGQVAS---------QTMEGLIVSNDCADRPVFRPLIAMDKTDIMDIARK 328

Query: 187 IGGQDLVNLILEE 199
           I   +   L  E+
Sbjct: 329 IETYETSILPYED 341


>gi|188590501|ref|YP_001922014.1| thiamine biosynthesis protein ThiI [Clostridium botulinum E3 str.
           Alaska E43]
 gi|238691977|sp|B2UX29|THII_CLOBA RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|188500782|gb|ACD53918.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           botulinum E3 str. Alaska E43]
          Length = 385

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 57/193 (29%), Gaps = 25/193 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              S +L+ SGG DS         R   +  + +                + K+ +L   
Sbjct: 174 MNGSTMLMLSGGIDSPVAGYLMAKRGVELNCVYYH------SHPYTSERAKDKVKDLAKI 227

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + ++  +              + M I D    +          +  A  +A   
Sbjct: 228 LASYTEKINLYVVPF----------TEIQMAILDKCREDELTIIMRRFMMRVACKIAEEK 277

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI ++  G      +          + +E  I     +   V  PL+ + K +   +A+ 
Sbjct: 278 GIQSVTSGESIGQVAS---------QTMEGLIVSNDCADRPVFRPLIAMDKTDIMDIARK 328

Query: 187 IGGQDLVNLILEE 199
           I   +   L  E+
Sbjct: 329 IETYETSILPYED 341


>gi|110803991|ref|YP_698721.1| thiamine biosynthesis protein ThiI [Clostridium perfringens SM101]
 gi|123047381|sp|Q0ST36|THII_CLOPS RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|110684492|gb|ABG87862.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           perfringens SM101]
          Length = 385

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 52/193 (26%), Gaps = 25/193 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              S +++ SGG DS         R      + +                + K+ EL   
Sbjct: 173 MNGSTMVMLSGGIDSPVAAYLMARRGVETHCVYYH------SHPYTSERAKDKVKELAKI 226

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 +  +  +              + M I +    +          +  A  L+ R 
Sbjct: 227 VGRYTEKITLYVVPF----------TEIQMDIIEKCREDELTIIMRRFMMRVACELSERK 276

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I +I  G      +            +             V  PL+ + K +   +A+D
Sbjct: 277 KIQSITTGESIGQVASQTMEGLMVSNDVSDR---------PVFRPLIAMDKEDIMDIARD 327

Query: 187 IGGQDLVNLILEE 199
           I   D   L  E+
Sbjct: 328 IDTYDTSILPYED 340


>gi|182417115|ref|ZP_02948491.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           butyricum 5521]
 gi|237669147|ref|ZP_04529131.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|182379048|gb|EDT76553.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           butyricum 5521]
 gi|237657495|gb|EEP55051.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 385

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 54/193 (27%), Gaps = 25/193 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              S +L+ SGG DS         R   +  + +                + K+ EL   
Sbjct: 174 MNGSTMLMLSGGIDSPVAGYLMAKRGVELNCVYYH------SHPYTSERAKDKVKELARI 227

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + ++  +             ++ M+I D    +          +  A  LA + 
Sbjct: 228 LSQYTEKINLYIVPF----------TDIQMEIIDKCREDELTIIMRRFMMRVACKLAEKY 277

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I ++  G      +                             PL+   K +  ++A+ 
Sbjct: 278 NIDSVCTGESIGQVASQTMDGLIVSDDCADR---------PAFRPLIATDKTDIMEIARK 328

Query: 187 IGGQDLVNLILEE 199
           IG  +   L  E+
Sbjct: 329 IGTYETSILPYED 341


>gi|182626455|ref|ZP_02954207.1| peptidase T [Clostridium perfringens D str. JGS1721]
 gi|177908252|gb|EDT70810.1| peptidase T [Clostridium perfringens D str. JGS1721]
          Length = 385

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 56/193 (29%), Gaps = 25/193 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              S +++ SGG DS         R      + +                + K+ EL   
Sbjct: 173 MNGSTMVMLSGGIDSPVAAYLMARRGVETHCVYYH------SHPYTSERAKDKVKELAKI 226

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 +  +  +              + M I +    +          +  A  L+ R 
Sbjct: 227 VGRYTEKITLYVVPF----------TEIQMDIIEKCREDELTIIMRRFMMRVACELSERK 276

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I +I  G      +          + +E  I     S   V  PL+ + K +   +A+D
Sbjct: 277 KIQSITTGESIGQVAS---------QTMEGLIVSNDVSDRPVFRPLIAMDKEDIMDIARD 327

Query: 187 IGGQDLVNLILEE 199
           I   +   L  E+
Sbjct: 328 IDTYETSILPYED 340


>gi|295101486|emb|CBK99031.1| thiazole biosynthesis/tRNA modification protein ThiI
           [Faecalibacterium prausnitzii L2-6]
          Length = 399

 Score = 83.8 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 55/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  AL + SGG DS         R   ++ + F                + K+  L    
Sbjct: 178 SGRALNMLSGGIDSPVAAYRMAKRGLGLDHIHF------ASPPYTSERAKLKVKALAQLI 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G  ++  +                  I+DN     F        +  A  +A + G
Sbjct: 232 TPYTGSTNLFVVPY----------TKPQEYIRDNAPDVLFTVLMRRSMMRIANIIARKQG 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +           A +          + +  PL+ + K E  + A+ I
Sbjct: 282 CEALVTGESLAQVASQTVKALQCTDAAQD---------LPILRPLIGMDKTEIVETARHI 332

Query: 188 GGQDLVNLILEE 199
              +   L  E+
Sbjct: 333 NTFETSILPYED 344


>gi|332850055|ref|ZP_08432442.1| hypothetical protein HMPREF0021_00011 [Acinetobacter baumannii
           6013150]
 gi|332871520|ref|ZP_08440014.1| hypothetical protein HMPREF0020_03669 [Acinetobacter baumannii
           6013113]
 gi|332730904|gb|EGJ62210.1| hypothetical protein HMPREF0021_00011 [Acinetobacter baumannii
           6013150]
 gi|332731374|gb|EGJ62666.1| hypothetical protein HMPREF0020_03669 [Acinetobacter baumannii
           6013113]
          Length = 440

 Score = 83.4 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 62/224 (27%), Gaps = 21/224 (9%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
            LFSGG DS+  +     +      +S  Y              + K   L         
Sbjct: 149 CLFSGGLDSAIGIIDLTSKNINPVLISHAY-----------ARDKSKQDNLYNLLGLKNS 197

Query: 73  EDHILPLA-ILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           +  ++      GDI      +  +          +    ++              G+ +I
Sbjct: 198 KFQVIAYPRKAGDIPTDVQMRTRSFNFIAFGALISTAISQHHQAGKVTTLYVPENGLISI 257

Query: 132 -VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
                     S      H     +   +   +   V +  P  ++ K E  +       +
Sbjct: 258 NPPLTPRRIGSLSTRTTHPHYMNLLNELFKRVHLPVFLENPYQFMTKGEMMQNCS---NK 314

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            ++  I +++ +C      K    G  C  C  C +R+  +   
Sbjct: 315 IILKQIAKDTVSC-----GKWKRTGIQCGKCVPCIIRRASFNSA 353


>gi|168210004|ref|ZP_02635629.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           perfringens B str. ATCC 3626]
 gi|170711837|gb|EDT24019.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           perfringens B str. ATCC 3626]
          Length = 385

 Score = 83.4 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 52/193 (26%), Gaps = 25/193 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              S +++ SGG DS         R      + +                + K+ EL   
Sbjct: 173 MNGSTMVMLSGGIDSPVAAYLMARRGVETHCVYYH------SHPYTSERAKDKVKELAKI 226

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 +  +  +              + M I +    +          +  A  L+ R 
Sbjct: 227 VGRYTEKITLYVVPF----------TEIQMDIIEKCREDELTIIMRRFMMRVACELSERK 276

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I +I  G      +            +             V  PL+ + K +   +A+D
Sbjct: 277 KIQSITTGESIGQVASQTMEGLMVSNDVSDR---------PVFRPLIAMDKEDIMDIARD 327

Query: 187 IGGQDLVNLILEE 199
           I   +   L  E+
Sbjct: 328 IDTYETSILPYED 340


>gi|169347202|ref|ZP_02866141.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           perfringens C str. JGS1495]
 gi|169296598|gb|EDS78729.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           perfringens C str. JGS1495]
          Length = 385

 Score = 83.4 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 52/193 (26%), Gaps = 25/193 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              S +++ SGG DS         R      + +                + K+ EL   
Sbjct: 173 MNGSTMVMLSGGIDSPVAAYLMARRGVETHCVYYH------SHPYTSERAKDKVKELAKI 226

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 +  +  +              + M I +    +          +  A  L+ R 
Sbjct: 227 VGRYTEKITLYVVPF----------TEIQMDIIEKCREDELTIIMRRFMMRVACELSERK 276

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I +I  G      +            +             V  PL+ + K +   +A+D
Sbjct: 277 KIQSITTGESIGQVASQTMEGLMVSNDVSDR---------PVFRPLIAMDKEDIMDIARD 327

Query: 187 IGGQDLVNLILEE 199
           I   +   L  E+
Sbjct: 328 IDTYETSILPYED 340


>gi|306825506|ref|ZP_07458846.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           sp. oral taxon 071 str. 73H25AP]
 gi|304432444|gb|EFM35420.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           sp. oral taxon 071 str. 73H25AP]
          Length = 404

 Score = 83.4 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 56/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      +L R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGVLMLSGGIDSPVAGYLSLKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREVRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +        TI A+ +           +  P++ + K E   +AQ+I
Sbjct: 281 GLIIINGESLGQVASQTLESMQTINAVTST---------PIIRPVVTMDKLEIIDIAQEI 331

Query: 188 GGQDLVNLILEE 199
              ++     E+
Sbjct: 332 DTFEISIQPFED 343


>gi|110801269|ref|YP_696105.1| thiamine biosynthesis protein ThiI [Clostridium perfringens ATCC
           13124]
 gi|168216800|ref|ZP_02642425.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           perfringens NCTC 8239]
 gi|123148743|sp|Q0TQI5|THII_CLOP1 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|110675916|gb|ABG84903.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           perfringens ATCC 13124]
 gi|182381029|gb|EDT78508.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           perfringens NCTC 8239]
          Length = 385

 Score = 83.4 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 52/193 (26%), Gaps = 25/193 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              S +++ SGG DS         R      + +                + K+ EL   
Sbjct: 173 MNGSTMVMLSGGIDSPVAAYLMARRGVETHCVYYH------SHPYTSERAKDKVKELAKI 226

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 +  +  +              + M I +    +          +  A  L+ R 
Sbjct: 227 VGRYTEKITLYVVPF----------TEIQMDIIEKCREDELTIIMRRFMMRVACELSERK 276

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I +I  G      +            +             V  PL+ + K +   +A+D
Sbjct: 277 KIQSITTGESIGQVASQTMEGLMVSNDVSDR---------PVFRPLIAMDKEDIMDIARD 327

Query: 187 IGGQDLVNLILEE 199
           I   +   L  E+
Sbjct: 328 IDTYETSILPYED 340


>gi|18310394|ref|NP_562328.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           perfringens str. 13]
 gi|20140598|sp|Q8XKI3|THII_CLOPE RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|18145074|dbj|BAB81118.1| probable thiamin biosynthesis protein [Clostridium perfringens str.
           13]
          Length = 385

 Score = 83.4 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 56/193 (29%), Gaps = 25/193 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              S +++ SGG DS         R      + +                + K+ EL   
Sbjct: 173 MNGSTMVMLSGGIDSPVAAYLMARRGVETHCVYYH------SHPYTSERAKDKVKELAKI 226

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 +  +  +              + M I +    +          +  A  L+ + 
Sbjct: 227 VGRYTEKITLYVVPF----------TEIQMDIIEKCREDELTIIMRRFMMRVACELSEKK 276

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I +I  G      +          + +E  I     S   V  PL+ + K +   +A+D
Sbjct: 277 KIQSITTGESIGQVAS---------QTMEGLIVSNDASDRPVFRPLIAMDKEDIMDIARD 327

Query: 187 IGGQDLVNLILEE 199
           I   +   L  E+
Sbjct: 328 IDTYETSILPYED 340


>gi|262038412|ref|ZP_06011786.1| thiamine biosynthesis/tRNA modification protein ThiI [Leptotrichia
           goodfellowii F0264]
 gi|261747507|gb|EEY34972.1| thiamine biosynthesis/tRNA modification protein ThiI [Leptotrichia
           goodfellowii F0264]
          Length = 395

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 60/194 (30%), Gaps = 26/194 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+L SGG DS         R  R+  ++F                 +KI EL      
Sbjct: 184 KGLVLLSGGIDSPVASFLMAKRGMRINFVTFH------SFPFTSKQALEKIKELTEILSI 237

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+  +  + IL            A+  +      T +  R ++ L      A  +   
Sbjct: 238 YTGKSRLYAVNILK--------IQEAINTKTKKELATILTRRAMMRLAEKL--ANSMQYQ 287

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++ G      +           A    +         V  PL+   K E  ++A++IG 
Sbjct: 288 ALITGESLGQVASQTLGGLTCTNASVEKL--------PVFRPLIGADKTEIIEIAKEIGT 339

Query: 190 QDLVNLILEESHTC 203
            +      E+  +C
Sbjct: 340 YEKSIEPHED--SC 351


>gi|254519390|ref|ZP_05131446.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           sp. 7_2_43FAA]
 gi|226913139|gb|EEH98340.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridium
           sp. 7_2_43FAA]
          Length = 384

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 59/194 (30%), Gaps = 29/194 (14%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             S +L+ SGG DS         R   +  + +                + K+ +L    
Sbjct: 173 NGSTMLMLSGGIDSPVAGYLMARRGVELHCVYYH------SHPYTSERAKDKVKDLAKIL 226

Query: 68  KDSL--GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    HI+P   +     +   ++                      +  A +L+ +
Sbjct: 227 ATYTERVNLHIVPFTEIQMAIINCCREDE------------LTIIMRRFMMRVACSLSEK 274

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            GI ++         S          + +E  +     +   V  PL+ + K +   +A+
Sbjct: 275 YGIQSV---------SSGESIGQVASQTMEGLMVSNDCADRPVFRPLIAMDKTDIMDIAR 325

Query: 186 DIGGQDLVNLILEE 199
           +IG  +   L  E+
Sbjct: 326 EIGTYETSILPYED 339


>gi|251782195|ref|YP_002996497.1| thiamine biosynthesis protein ThiI [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
 gi|242390824|dbj|BAH81283.1| thiamine biosynthesis protein [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 404

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 55/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                  K   L  + 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGLDIEAVHF------ASPPYTSPGALAKAQNLTRRL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I++       +       +     +  +  
Sbjct: 231 TRFGGNIQFIEVPF----------TEIQEEIKNKAPEAYLMTLTRRFMMRITDAIREQRH 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+ +           +  P++ + K E  ++AQ I
Sbjct: 281 ALVIVNGESLGQVASQTLESMQAINAVTST---------PIIRPVVTMDKLEIIEMAQAI 331

Query: 188 GGQDLVNLILEE 199
              ++     E+
Sbjct: 332 DTFNISIQPFED 343


>gi|315641426|ref|ZP_07896499.1| thiamine biosynthesis protein ThiI [Enterococcus italicus DSM
           15952]
 gi|315482813|gb|EFU73336.1| thiamine biosynthesis protein ThiI [Enterococcus italicus DSM
           15952]
          Length = 402

 Score = 83.4 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 60/188 (31%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +L+ SGG DS     +A+ R   +E + F                 +K  +L  K    +
Sbjct: 181 MLMLSGGIDSPVAGYFAMKRGVEIEAVHF------ASPPYTSEQALQKAKDLTSKLAPYV 234

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G    + +              +  +I+       ++     + L     +        I
Sbjct: 235 GSIQFIEVPF----------TEIQEEIKRRVPQGYWMTITRRMMLRLTDMIRDMRNGLII 284

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           + G      +          + +++ + +   +   V  P+  + K E  ++AQ I   +
Sbjct: 285 INGESLGQVAS---------QTLQSMVAINEVTTTPVIRPVATMDKLEIIEVAQAIDTFE 335

Query: 192 LVNLILEE 199
           L     E+
Sbjct: 336 LAIQPFED 343


>gi|240103541|ref|YP_002959850.1| hypothetical protein TGAM_1484 [Thermococcus gammatolerans EJ3]
 gi|239911095|gb|ACS33986.1| Thiamin biosynthesis protein (thiI) [Thermococcus gammatolerans
           EJ3]
          Length = 197

 Score = 83.0 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 65/184 (35%), Gaps = 25/184 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+ L S G DS   +   L R   V  + F   Q    E        +K+ EL      
Sbjct: 2   KAVALLSSGIDSPVAVYLMLRRGVEVVPVHFR--QDPIKE--------EKVRELWEVLSK 51

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
               D ++ +    +         V  ++++             + L  A  + + +G +
Sbjct: 52  YGKLDELIVVDFAEEH------VPVFERLKELKKERWTCIFCKWLMLRRACRIGHEVGAS 105

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I+ G      +          + ++  + +   S + V  PL+ + K E  K+A++IG 
Sbjct: 106 AIITGDSLGQVAS---------QTLDNLMIVSSASDLPVLRPLIGMDKEEIVKIAKEIGT 156

Query: 190 QDLV 193
            ++ 
Sbjct: 157 FEIS 160


>gi|84685921|ref|ZP_01013817.1| hypothetical protein 1099457000261_RB2654_14420 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84666014|gb|EAQ12488.1| hypothetical protein RB2654_14420 [Rhodobacterales bacterium
           HTCC2654]
          Length = 616

 Score = 83.0 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 66/242 (27%), Gaps = 42/242 (17%)

Query: 12  LLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           +L+FSGG DS         +R +RV  +S                +     +L     + 
Sbjct: 156 VLMFSGGLDSFAGALEEIAERGERVALVSH----------FSASKIAPVQRQLHKTLTEK 205

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            GE+             S     V +++    L       R+ +F    A  A   G+  
Sbjct: 206 FGEN-------------SCRHIPVQVQMVGRGLKEGTHRARSFLFAALGAVTARAFGLNR 252

Query: 131 IVIGVCETD------------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
           +                              T+      +     S   +  P  W  K 
Sbjct: 253 VSFFENGVVSLNLSPVGNVLGTRATRTTHPQTLSRFSDFLGRVFASETRIDNPFFWRTKK 312

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
           E  +    +G  +     + ++ +C       + +    C  C  C  R+   +    + 
Sbjct: 313 EVVETVARLGMSEQ----IAQTRSC--ADVHNQTKQHIHCGRCSQCIDRRFAVLAAGLER 366

Query: 239 QD 240
            D
Sbjct: 367 FD 368


>gi|322411530|gb|EFY02438.1| thiamine biosynthesis protein ThiI [Streptococcus dysgalactiae
           subsp. dysgalactiae ATCC 27957]
          Length = 404

 Score = 83.0 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 55/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                  K   L  + 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGLDIEAVHF------ASPPYTSPGALVKAQNLTRRL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I++       +       +     +  +  
Sbjct: 231 TRFGGNIQFIEVPF----------TEIQEEIKNKAPEAYLMTLTRRFMMRITDAIREQRH 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+ +           +  P++ + K E  ++AQ I
Sbjct: 281 ALVIVNGESLGQVASQTLESMQAINAVTST---------PIIRPVVTMDKLEIIEMAQAI 331

Query: 188 GGQDLVNLILEE 199
              ++     E+
Sbjct: 332 DTFEISIQPFED 343


>gi|313885161|ref|ZP_07818913.1| thiamine biosynthesis/tRNA modification protein ThiI [Eremococcus
           coleocola ACS-139-V-Col8]
 gi|312619852|gb|EFR31289.1| thiamine biosynthesis/tRNA modification protein ThiI [Eremococcus
           coleocola ACS-139-V-Col8]
          Length = 405

 Score = 83.0 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   LL+ SGG DS       + R   +E + F                 +K  +L  K 
Sbjct: 179 SGKGLLMLSGGFDSPIAGYLMMKRGMELEAVHF------ASPPYTSPQALEKAKKLTAKL 232

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                   +  +                  I+++   N  +     I L     L  R  
Sbjct: 233 AHYGLPLKLHVVPF----------TKTQEAIKEHIHDNESMTVMRRIMLRIMDQLLIRQK 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+  +          +  PL+   K +   LAQ I
Sbjct: 283 ANAIVNGESLGQVASQTIDSMRVINAVTNS---------PILRPLIATDKNDIINLAQTI 333

Query: 188 GGQDLVNLILEE 199
               + N   E+
Sbjct: 334 DTYTISNEPYED 345


>gi|303246085|ref|ZP_07332366.1| tRNA methyl transferase-like protein [Desulfovibrio fructosovorans
           JJ]
 gi|302492481|gb|EFL52352.1| tRNA methyl transferase-like protein [Desulfovibrio fructosovorans
           JJ]
          Length = 182

 Score = 83.0 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 64/221 (28%), Gaps = 43/221 (19%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
               +L SGG DSS C  +       VE + F YGQ    + E                 
Sbjct: 2   KKVYVLLSGGIDSSACAHFYQQADFLVEAIFFSYGQAASAKEEIASK------------- 48

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            ++ +   + L      +  + +    +      + +     R     +     A     
Sbjct: 49  -NIADHLGIHLTKYNLETTQTFSTGELIGRNAFFIFSAIFFSRITNGSISLGIHA----- 102

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                       + Y DC       I   +N      V +  P +   K + ++      
Sbjct: 103 -----------GTTYYDCSAIFFDRINKLVNEYTNGCVNIQAPFLKWTKNDIYQY----- 146

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
                 + +E +++C LG         Y C  C +C  R+ 
Sbjct: 147 -FLSTKIPIELTYSCELGSD-------YPCGRCASCRDRKA 179


>gi|298291918|ref|YP_003693857.1| hypothetical protein Snov_1936 [Starkeya novella DSM 506]
 gi|296928429|gb|ADH89238.1| conserved hypothetical protein [Starkeya novella DSM 506]
          Length = 461

 Score = 83.0 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 59/230 (25%), Gaps = 9/230 (3%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            + LFSGG DS       LDR       S      +  +       R+    L   +   
Sbjct: 151 CVSLFSGGLDSLIGAVDLLDRGRTPLFAS------HGGDGAVSGPQRRLFDALGKTFVRQ 204

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G   +     +       +      + +     +      +     F   +     I+ 
Sbjct: 205 GGLARVRLGLTIPKQLVPGVGSEDTTRGRSFLFFSLGAAAGSGFGRSFELRVPENGLISL 264

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
            V        S      H         +   +    TV  P     K E          Q
Sbjct: 265 NVPLDSTRLGSNSTRTTHPFYIHRWNELLKTLGIPATVVNPYWAKTKGEMVSECA---NQ 321

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
            ++  +   S +C      +  +    C  C  C +R+   ++     +D
Sbjct: 322 TVLEALSPLSSSCAHPASKRWNQGKDHCGYCLPCIIRKGALLKASWAVKD 371


>gi|295696494|ref|YP_003589732.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
           tusciae DSM 2912]
 gi|295412096|gb|ADG06588.1| thiamine biosynthesis/tRNA modification protein ThiI [Bacillus
           tusciae DSM 2912]
          Length = 410

 Score = 83.0 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+LL SGG DS       + R  +VE + FD               R+K+ +L    
Sbjct: 186 SGRAMLLLSGGIDSPVAGWMTMKRGVQVEAVHFD------SYPFTSERSRRKVEQLADLL 239

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  +        + + K + +   +             I    AA       
Sbjct: 240 GAFEGGMTLHVVHF------TDVQKAIRIHCPEPFYVTIMRRMMVRIAERIAA------- 286

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                                   + +E+ + +   + + +  PL+   K E  +LA+ I
Sbjct: 287 ------RRRALALVTGESLGQVASQTLESMVAINEVATLPILKPLVAWDKVEIIRLARSI 340

Query: 188 GGQDLVNLILEE 199
           G  +      E+
Sbjct: 341 GTYETSIQPYED 352


>gi|311031309|ref|ZP_07709399.1| thiamine biosynthesis protein ThiI [Bacillus sp. m3-13]
          Length = 402

 Score = 83.0 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 60/188 (31%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +L+ SGG DS      A+ R  R+E + F                ++K+VEL  +  D  
Sbjct: 181 VLMLSGGIDSPVAGYLAMKRGIRLEVVHFF------SPPYTSERAKQKVVELTERLTDFG 234

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
              ++  +        + +   +  ++ +N    +       I                I
Sbjct: 235 HSINLHIVPF------TDIQVAIQKQVPENYTMTSTRRFMLKI-------------ADKI 275

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
                               + +++   +   +   +  PL+ + K E   +A+ I   +
Sbjct: 276 CEKEQGLAIITGESLGQVASQTLQSMSTINEVTSTPIIRPLITMDKIEIMDIAKHIDTLE 335

Query: 192 LVNLILEE 199
           + N   E+
Sbjct: 336 ISNRPYED 343


>gi|312865200|ref|ZP_07725428.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           downei F0415]
 gi|311099311|gb|EFQ57527.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           downei F0415]
          Length = 408

 Score = 83.0 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 54/190 (28%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +L+ SGG DS      AL R   +E + F                 KK  +L  K   
Sbjct: 183 KGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKLTK 236

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G    + +           T+                  R  +  +       R G+ 
Sbjct: 237 FGGNIQFIEVPF---------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIRQERHGLV 287

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I         S          + +E+   +   +   V  P++ + K E   +A+ I  
Sbjct: 288 IINGESLGQVAS----------QTLESMQAINAVTTTPVIRPVVTMDKLEIIDIAEKINT 337

Query: 190 QDLVNLILEE 199
            ++     E+
Sbjct: 338 FEISIQPFED 347


>gi|160946023|ref|ZP_02093249.1| hypothetical protein FAEPRAM212_03556 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443754|gb|EDP20759.1| hypothetical protein FAEPRAM212_03556 [Faecalibacterium prausnitzii
           M21/2]
          Length = 418

 Score = 83.0 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 55/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  AL + SGG DS         R   ++ + F                + K+  L    
Sbjct: 197 SGRALNMLSGGIDSPVAAYRMAKRGLALDHIHF------ASPPYTSERAKLKVKALAQLI 250

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G  ++  +                  I+DN     F        +  A  +A + G
Sbjct: 251 TVYTGSANLFVVPY----------TKPQEYIRDNAPDVLFTVLMRRSMMRIANVIAKKQG 300

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +           A +          + +  PL+ + K E  + ++ I
Sbjct: 301 CEALVTGESLAQVASQTVKALQCTDAAQD---------LPILRPLIGMDKTEIIETSRHI 351

Query: 188 GGQDLVNLILEE 199
              +   L  E+
Sbjct: 352 NTFETSILPYED 363


>gi|315221354|ref|ZP_07863275.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           anginosus F0211]
 gi|315189473|gb|EFU23167.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           anginosus F0211]
          Length = 404

 Score = 83.0 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 53/192 (27%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREERS 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             +  P++ + K E   +A+ I
Sbjct: 281 GLVIINGESLGQVASQTLESMQAINAVTNT---------PIIRPVVTMDKLEIIDIAEKI 331

Query: 188 GGQDLVNLILEE 199
              ++     E+
Sbjct: 332 DTFNISIQPFED 343


>gi|150020038|ref|YP_001305392.1| thiamine biosynthesis protein ThiI [Thermosipho melanesiensis
           BI429]
 gi|149792559|gb|ABR30007.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermosipho
           melanesiensis BI429]
          Length = 389

 Score = 83.0 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 71/196 (36%), Gaps = 26/196 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+LL SGG DS     + L R  ++ETLSF                 KK+++L    
Sbjct: 173 SGKAILLLSGGIDSPVAGWYMLKRGLKIETLSF------LSPPFTSEKSAKKVLDLASIL 226

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                E        +     S       +K    +  +  +  R+++ +    +   +  
Sbjct: 227 AKYSPE-------PIKANIVSFTEVQQYIKKNAPDKYSLILQRRSMMRIANKLSR--KRH 277

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +          + +    ++   S+V V  PL+  +K +  + A++I
Sbjct: 278 AKALITGENIAQVAS---------QTLSNLASIEDASNVPVLRPLIGFEKIDIVEKAKEI 328

Query: 188 GGQDLVNLILEESHTC 203
           G  ++  L   +  +C
Sbjct: 329 GTYEISILPYID--SC 342


>gi|331266672|ref|YP_004326302.1| thiamine biosynthesis/tRNA modification protein ThiI (Thiamine
           biosynthesis ATP pyrophosphatase) [Streptococcus oralis
           Uo5]
 gi|326683344|emb|CBZ00962.1| thiamine biosynthesis/tRNA modification protein ThiI (Thiamine
           biosynthesis ATP pyrophosphatase) [Streptococcus oralis
           Uo5]
          Length = 404

 Score = 82.7 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 56/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREIRK 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +        TI A+ +           V  P++ + K E   +AQ+I
Sbjct: 281 GLIIINGESLGQVASQTLESMQTINAVTST---------PVIRPVVTMDKLEIIDIAQEI 331

Query: 188 GGQDLVNLILEE 199
              ++     E+
Sbjct: 332 DTFEISIQPFED 343


>gi|295103270|emb|CBL00814.1| thiazole biosynthesis/tRNA modification protein ThiI
           [Faecalibacterium prausnitzii SL3/3]
          Length = 399

 Score = 82.7 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 55/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  AL + SGG DS         R   ++ + F                + K+  L    
Sbjct: 178 SGRALNMLSGGIDSPVAAYRMAKRGLALDHIHF------ASPPYTSERAKLKVKALAQLI 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G  ++  +                  I+DN     F        +  A  +A + G
Sbjct: 232 TVYTGSANLFVVPY----------TKPQEYIRDNAPDVLFTVLMRRSMMRIANVIAKKQG 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +           A +          + +  PL+ + K E  + ++ I
Sbjct: 282 CEALVTGESLAQVASQTVKALQCTDAAQD---------LPILRPLIGMDKTEIIETSRHI 332

Query: 188 GGQDLVNLILEE 199
              +   L  E+
Sbjct: 333 NTFETSILPYED 344


>gi|328950829|ref|YP_004368164.1| tRNA sulfurtransferase [Marinithermus hydrothermalis DSM 14884]
 gi|328451153|gb|AEB12054.1| tRNA sulfurtransferase [Marinithermus hydrothermalis DSM 14884]
          Length = 404

 Score = 82.7 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 56/189 (29%), Gaps = 25/189 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   ++L SGG DS       + R  R   + F                  K  + +   
Sbjct: 172 SGKVVVLLSGGIDSPVAAWRMMKRGARAVFVHFH------SYPHTDYYSAVKSKKTVEVL 225

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D  GE  +  + +            V  +I                 L  A  +A +  
Sbjct: 226 ADWQGESKLYLVPLAK----------VQEEIFARCPERYRTLLYRRFMLRIAEAIAEQED 275

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +          + +E    +G    + V  PL+ + K E  + A+ I
Sbjct: 276 AKALVTGDALGQVAS---------QTLENMHAVGRAVRMLVLRPLVGMDKTEVIEAAKRI 326

Query: 188 GGQDLVNLI 196
           G  ++  L 
Sbjct: 327 GTYEISILP 335


>gi|322374568|ref|ZP_08049082.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           sp. C300]
 gi|321280068|gb|EFX57107.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           sp. C300]
          Length = 404

 Score = 82.7 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 56/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAHDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREIRK 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +        TI A+ +           V  PL+ + K E   +AQ+I
Sbjct: 281 GLIIINGESLGQVASQTLESMQTINAVTST---------PVIRPLVTMDKLEIIDIAQEI 331

Query: 188 GGQDLVNLILEE 199
              ++     E+
Sbjct: 332 DTFEISIQPFED 343


>gi|15679679|ref|NP_276796.1| hypothetical protein MTH1685 [Methanothermobacter
           thermautotrophicus str. Delta H]
 gi|3915120|sp|O27720|THII_METTH RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|2622815|gb|AAB86157.1| conserved protein [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 389

 Score = 82.7 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 53/188 (28%), Gaps = 25/188 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L SGG DS       + R  +V  +  D                +K+ ++  K  +
Sbjct: 179 KVVALLSGGIDSPVATYLMMKRGCQVVAVHMD------NAPFTGEEAEEKVEKIAAKLAE 232

Query: 70  S-LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G +  L     G    S                              A  +A   G 
Sbjct: 233 YSAGVEFKLRTFSYGRYLESCRRGAPEK---------MTCVLCKFGMYHLAEMVAEEEGA 283

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             IV G      +                +   M  ++ + +PL+ + K E   LA+ IG
Sbjct: 284 LAIVDGSSLGQVASQTLP---------NILATRMGVNIPILSPLIGMDKVEIENLAKRIG 334

Query: 189 GQDLVNLI 196
             D+  + 
Sbjct: 335 TYDISVIP 342


>gi|259502838|ref|ZP_05745740.1| thiamine biosynthesis protein ThiI [Lactobacillus antri DSM 16041]
 gi|259169205|gb|EEW53700.1| thiamine biosynthesis protein ThiI [Lactobacillus antri DSM 16041]
          Length = 422

 Score = 82.7 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 54/190 (28%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +++ SGG DS       + R   +E + F                  K  +L  K   
Sbjct: 196 KGMMMLSGGIDSPVAAYLGMKRGVSMEMVHFF------SPPYTSPQALAKAKQLTEKLAK 249

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G    + +              +   +++       +  +  + L  A  +  +    
Sbjct: 250 YSGSIRFIQVPF----------TEIQETVKEKVPEGYLMTVQRRMMLRLATAIMEKRHGL 299

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +         I  +             V  P++   K E  K+A+DI  
Sbjct: 300 AIFNGESLGQVASQTMESMLAIEDVTNY---------PVLRPVLSFDKTEIIKIAEDIDT 350

Query: 190 QDLVNLILEE 199
            DL  L  E+
Sbjct: 351 YDLSILPYED 360


>gi|313114973|ref|ZP_07800467.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310622703|gb|EFQ06164.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 399

 Score = 82.7 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 55/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  AL + SGG DS         R   ++ + F                + K+  L    
Sbjct: 178 SGRALNMLSGGIDSPVAAYRMAKRGLALDHIHF------ASPPYTSERAKLKVKALAQLT 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G  ++  +                  I+DN     F        +  A  +A + G
Sbjct: 232 SIYTGSSNLFVVPY----------TKPQEYIRDNAPDVLFTVLMRRSMMRIANVIAKKQG 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +           A +          + +  PL+ + K E  + A+ I
Sbjct: 282 CEALVTGESLAQVASQTVKALQCTDAAQD---------LPILRPLIGMDKTEIVETARHI 332

Query: 188 GGQDLVNLILEE 199
              +   L  E+
Sbjct: 333 NTFETSILPYED 344


>gi|315653726|ref|ZP_07906646.1| thiamine biosynthesis protein ThiI [Lactobacillus iners ATCC 55195]
 gi|315489088|gb|EFU78730.1| thiamine biosynthesis protein ThiI [Lactobacillus iners ATCC 55195]
          Length = 405

 Score = 82.7 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS      A+ R  +++ + F                  K  EL     +
Sbjct: 179 RAVMMLSGGIDSPVASYLAMKRGVKIDMVHFF------SPPYTTDKALAKAEELTGILAN 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+ + + +              +  +I++       +  +    L  A  +    G  
Sbjct: 233 YCGKINFIAVPF----------TEIQEQIKEKLPEGYLMTVQRRFMLQLADKIREMRGGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+ + +   ++  V  P+  + K E   LA  IG 
Sbjct: 283 AIFNGESVGQVAS---------QTLESMVAINDVTNTPVLRPVATMDKTEIIALADKIGT 333

Query: 190 QDLVNLILEE 199
            +L     E+
Sbjct: 334 FELSIQPFED 343


>gi|312871974|ref|ZP_07732056.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           iners LEAF 2062A-h1]
 gi|311092551|gb|EFQ50913.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           iners LEAF 2062A-h1]
          Length = 405

 Score = 82.7 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS      A+ R  +++ + F                  K  EL     +
Sbjct: 179 RAVMMLSGGIDSPVASYLAMKRGVKIDMVHFF------SPPYTTDKALAKAEELTGILAN 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+ + + +              +  +I++       +  +    L  A  +    G  
Sbjct: 233 YCGKINFIAVPF----------TEIQEQIKEKLPEGYLMTVQRRFMLQLADKIREMRGGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+ + +   ++  V  P+  + K E   LA  IG 
Sbjct: 283 AIFNGESVGQVAS---------QTLESMVAINDVTNTPVLRPVATMDKTEIIALADKIGT 333

Query: 190 QDLVNLILEE 199
            +L     E+
Sbjct: 334 FELSIQPFED 343


>gi|309807742|ref|ZP_07701676.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           iners LactinV 01V1-a]
 gi|308169002|gb|EFO71086.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           iners LactinV 01V1-a]
          Length = 350

 Score = 82.7 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS      A+ R  +++ + F                  K  EL     +
Sbjct: 124 RAVMMLSGGIDSPVASYLAMKRGVKIDMVHFF------SPPYTTDKALAKAEELTGILAN 177

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+ + + +              +  +I++       +  +    L  A  +    G  
Sbjct: 178 YCGKINFIAVPF----------TEIQEQIKEKLPEGYLMTVQRRFMLQLADKIREMRGGL 227

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+ + +   ++  V  P+  + K E   LA  IG 
Sbjct: 228 AIFNGESVGQVAS---------QTLESMVAINDVTNTPVLRPVATMDKTEIIALADKIGT 278

Query: 190 QDLVNLILEE 199
            +L     E+
Sbjct: 279 FELSIQPFED 288


>gi|309804814|ref|ZP_07698878.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           iners LactinV 09V1-c]
 gi|309806271|ref|ZP_07700284.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           iners LactinV 03V1-b]
 gi|309809947|ref|ZP_07703795.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           iners SPIN 2503V10-D]
 gi|312871623|ref|ZP_07731715.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           iners LEAF 3008A-a]
 gi|312873233|ref|ZP_07733289.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           iners LEAF 2052A-d]
 gi|312874660|ref|ZP_07734684.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           iners LEAF 2053A-b]
 gi|325911698|ref|ZP_08174105.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           iners UPII 143-D]
 gi|308165924|gb|EFO68143.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           iners LactinV 09V1-c]
 gi|308167255|gb|EFO69421.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           iners LactinV 03V1-b]
 gi|308169735|gb|EFO71780.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           iners SPIN 2503V10-D]
 gi|311089890|gb|EFQ48310.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           iners LEAF 2053A-b]
 gi|311091244|gb|EFQ49632.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           iners LEAF 2052A-d]
 gi|311092848|gb|EFQ51200.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           iners LEAF 3008A-a]
 gi|325476464|gb|EGC79623.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           iners UPII 143-D]
          Length = 405

 Score = 82.7 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS      A+ R  +++ + F                  K  EL     +
Sbjct: 179 RAVMMLSGGIDSPVASYLAMKRGVKIDMVHFF------SPPYTTDKALAKAEELTGILAN 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+ + + +              +  +I++       +  +    L  A  +    G  
Sbjct: 233 YCGKINFIAVPF----------TEIQEQIKEKLPEGYLMTVQRRFMLQLADKIREMRGGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+ + +   ++  V  P+  + K E   LA  IG 
Sbjct: 283 AIFNGESVGQVAS---------QTLESMVAINDVTNTPVLRPVATMDKTEIIALADKIGT 333

Query: 190 QDLVNLILEE 199
            +L     E+
Sbjct: 334 FELSIQPFED 343


>gi|302191129|ref|ZP_07267383.1| thiamine biosynthesis protein ThiI [Lactobacillus iners AB-1]
 gi|309803201|ref|ZP_07697298.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           iners LactinV 11V1-d]
 gi|308164709|gb|EFO66959.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           iners LactinV 11V1-d]
          Length = 405

 Score = 82.7 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS      A+ R  +++ + F                  K  EL     +
Sbjct: 179 RAVMMLSGGIDSPVASYLAMKRGVKIDMVHFF------SPPYTTDKALAKAEELTGILAN 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+ + + +              +  +I++       +  +    L  A  +    G  
Sbjct: 233 YCGKINFIAVPF----------TEIQEQIKEKLPEGYLMTVQRRFMLQLADKIREMRGGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+ + +   ++  V  P+  + K E   LA  IG 
Sbjct: 283 AIFNGESVGQVAS---------QTLESMVAINDVTNTPVLRPVATMDKTEIIALADKIGT 333

Query: 190 QDLVNLILEE 199
            +L     E+
Sbjct: 334 FELSIQPFED 343


>gi|259501663|ref|ZP_05744565.1| thiamine biosynthesis protein ThiI [Lactobacillus iners DSM 13335]
 gi|259166948|gb|EEW51443.1| thiamine biosynthesis protein ThiI [Lactobacillus iners DSM 13335]
          Length = 399

 Score = 82.7 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS      A+ R  +++ + F                  K  EL     +
Sbjct: 173 RAVMMLSGGIDSPVASYLAMKRGVKIDMVHFF------SPPYTTDKALAKAEELTGILAN 226

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+ + + +              +  +I++       +  +    L  A  +    G  
Sbjct: 227 YCGKINFIAVPF----------TEIQEQIKEKLPEGYLMTVQRRFMLQLADKIREMRGGL 276

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+ + +   ++  V  P+  + K E   LA  IG 
Sbjct: 277 AIFNGESVGQVAS---------QTLESMVAINDVTNTPVLRPVATMDKTEIIALADKIGT 327

Query: 190 QDLVNLILEE 199
            +L     E+
Sbjct: 328 FELSIQPFED 337


>gi|312870435|ref|ZP_07730555.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           oris PB013-T2-3]
 gi|311093992|gb|EFQ52316.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           oris PB013-T2-3]
          Length = 406

 Score = 82.7 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 54/190 (28%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +++ SGG DS       + R   +E + F                  K  +L  K   
Sbjct: 180 KGMMMLSGGIDSPVAAYLGMKRGVSMEMVHFF------SPPYTSPQALAKAKQLTEKLAK 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G    + +              +   +++       +  +  + L  A  +  +    
Sbjct: 234 YSGSIKFIQVPF----------TEIQETVKEKVPEGYLMTVQRRMMLRLATAIMEKRHGL 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +         I  +             V  P++   K E  K+A++I  
Sbjct: 284 AIFNGESLGQVASQTMESMMAIEDVTNY---------PVLRPVLSFDKTEIIKIAENIDT 334

Query: 190 QDLVNLILEE 199
            DL  L  E+
Sbjct: 335 YDLSILPYED 344


>gi|307709191|ref|ZP_07645650.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           mitis SK564]
 gi|307620137|gb|EFN99254.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           mitis SK564]
          Length = 404

 Score = 82.7 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 55/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREVRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +        TI A+ +           V  P++ + K E   +AQ I
Sbjct: 281 GLVIINGESLGQVASQTLESMQTINAVTST---------PVIRPVVTMDKLEIIDIAQVI 331

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 332 DTFDISIQPFED 343


>gi|329921116|ref|ZP_08277639.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           iners SPIN 1401G]
 gi|328935023|gb|EGG31512.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           iners SPIN 1401G]
          Length = 405

 Score = 82.7 bits (202), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 61/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS      A+ R   ++ + F                  K  EL     +
Sbjct: 179 RAVMMLSGGIDSPVASYLAMKRGVNIDMVHFF------SPPYTTDKALAKAEELTGILAN 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+ + + +              +  +I++       +  +    L  A  +    G  
Sbjct: 233 YCGKINFIAVPF----------TEIQEQIKEKLPEGYLMTVQRRFMLQLADKIREMRGGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+ + +   ++  V  P+  + K E   LA  IG 
Sbjct: 283 AIFNGESVGQVAS---------QTLESMVAINDVTNTPVLRPVATMDKTEIIALADKIGT 333

Query: 190 QDLVNLILEE 199
            +L     E+
Sbjct: 334 FELSIQPFED 343


>gi|325913007|ref|ZP_08175380.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           iners UPII 60-B]
 gi|325477687|gb|EGC80826.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           iners UPII 60-B]
          Length = 405

 Score = 82.3 bits (201), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 61/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+++ SGG DS      A+ R  +++ + F                  K  EL     +
Sbjct: 179 RAVMMLSGGIDSPVASYLAMKRGVKIDMVHFF------SPPYTTDKALAKAEELTGILAN 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+ + + +              +  +I++       +  +    L  A  +    G  
Sbjct: 233 YCGKINFIAVPF----------TEIQEQIKEKLPEGYLMTVQRRFMLQLADKIREMRGGL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +          + +E+ + +   +   V  P+  + K E   LA  IG 
Sbjct: 283 AIFNGESVGQVAS---------QTLESMVAINDVTSTPVLRPVATMDKTEIIALADKIGT 333

Query: 190 QDLVNLILEE 199
            +L     E+
Sbjct: 334 FELSIQPFED 343


>gi|94311104|ref|YP_584314.1| hypothetical protein Rmet_2166 [Cupriavidus metallidurans CH34]
 gi|93354956|gb|ABF09045.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
          Length = 419

 Score = 82.3 bits (201), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 64/235 (27%), Gaps = 30/235 (12%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            + L SGG DS      A+ +  R   +S       ++  E     R+    L       
Sbjct: 139 CVALLSGGLDSLIGGIDAVAKMRRPIFVS-------QLAYEDSERQRQYAAALGGAAWHQ 191

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                I P          +  +  + + +        V   +++     A +        
Sbjct: 192 QWSHRIDP----------AAPREPSTRARSMGFYALAVLATSLLTTTGPAEILVPENGFI 241

Query: 131 IVIGV--CETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
            V          S      H         +   +     +  P  +  K E   +  +  
Sbjct: 242 SVNPPLLPGRMASLSTRTTHPLFMKQLQGLLKAVGIPANLSMPYRFKTKGE---MMMECL 298

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK----EKYQ 239
            Q L+     +S +C       R      C  C  C +R+  ++ +      +Y+
Sbjct: 299 DQKLLAHFASDSTSC----GRYRTYNRTHCGRCVPCMVRRAAFLRWGQADDTRYK 349


>gi|319947191|ref|ZP_08021425.1| thiamine biosynthesis protein ThiI [Streptococcus australis ATCC
           700641]
 gi|319747239|gb|EFV99498.1| thiamine biosynthesis protein ThiI [Streptococcus australis ATCC
           700641]
          Length = 406

 Score = 82.3 bits (201), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 179 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAHDLTRKL 232

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +    G
Sbjct: 233 TKFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDRIRQIRG 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+             V  P++ + K E   +AQ I
Sbjct: 283 GLVIINGESLGQVASQTLESMQAINAVTNT---------PVIRPVVTMDKLEIIDIAQAI 333

Query: 188 GGQDLVNLILEE 199
              ++     E+
Sbjct: 334 DTFEISIQPFED 345


>gi|170737426|ref|YP_001778686.1| hypothetical protein Bcenmc03_5066 [Burkholderia cenocepacia MC0-3]
 gi|169819614|gb|ACA94196.1| conserved hypothetical protein [Burkholderia cenocepacia MC0-3]
          Length = 369

 Score = 82.3 bits (201), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 60/224 (26%), Gaps = 16/224 (7%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            + L SGG DS        +       +S    Q  K + E +      +       + +
Sbjct: 82  CVCLLSGGLDSLVGALDLTEEGRHPLLVS----QTAKGDKETQSRFAIGLGGNDRHLQWN 137

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                 +          S      A    D+         R +   V    L     I+ 
Sbjct: 138 QNIRPKVEDIEGSTRGRSIGFFAFAAVAADHLATTITALPRPVEVFVPENGL-----ISL 192

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
            +        S      H    A   A+   +     +  P   + K E     +     
Sbjct: 193 NIPLNPGRVGSLSTKTTHPVFMARLQALWDELGIRAVLRLPYAAMTKGEMMAECRA--ST 250

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            L ++  E + +C    R  R  +   C  C  C +R+  ++  
Sbjct: 251 VLADVASEAT-SC---GRFVRNGY-KHCGRCVPCLVRRASFIRA 289


>gi|107025515|ref|YP_623026.1| hypothetical protein Bcen_3157 [Burkholderia cenocepacia AU 1054]
 gi|116693304|ref|YP_838837.1| hypothetical protein Bcen2424_5211 [Burkholderia cenocepacia
           HI2424]
 gi|105894889|gb|ABF78053.1| conserved hypothetical protein [Burkholderia cenocepacia AU 1054]
 gi|116651304|gb|ABK11944.1| conserved hypothetical protein [Burkholderia cenocepacia HI2424]
          Length = 428

 Score = 82.3 bits (201), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 60/224 (26%), Gaps = 16/224 (7%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            + L SGG DS        +       +S    Q  K + E +      +       + +
Sbjct: 141 CVCLLSGGLDSLVGALDLTEEGRHPLLVS----QTAKGDKETQSRFAIGLGGNDRHLQWN 196

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                 +          S      A    D+         R +   V    L     I+ 
Sbjct: 197 QNIRPKVEDIEGSTRGRSIGFFAFAAVAADHLATTITALPRPVEVFVPENGL-----ISL 251

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
            +        S      H    A   A+   +     +  P   + K E     +     
Sbjct: 252 NIPLNPGRVGSLSTKTTHPVFMARLQALWDELGIRAVLRLPYAAMTKGEMMAECRA--ST 309

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            L ++  E + +C    R  R  +   C  C  C +R+  ++  
Sbjct: 310 VLADVASEAT-SC---GRFVRNGY-KHCGRCVPCLVRRASFIRA 348


>gi|255027790|ref|ZP_05299776.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes FSL
           J2-003]
          Length = 310

 Score = 82.3 bits (201), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A  R   +E + F                ++K ++L  K 
Sbjct: 154 SGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHFH------SPPYTSEQAKQKAIDLAAKL 207

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  +              +   I+     +  +     + L     L  +  
Sbjct: 208 AKYSGQVQMHIVPF----------TEIQEVIKQQIPESVIMTVTRRMMLRITDELRRKRN 257

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+             +  P++ + K E  ++AQ I
Sbjct: 258 GLAIVNGESLGQVASQTLESMLAINAVTAT---------PIIRPVVSMDKNEIIQIAQKI 308

Query: 188 GG 189
             
Sbjct: 309 DT 310


>gi|94498670|ref|ZP_01305222.1| hypothetical protein SKA58_16027 [Sphingomonas sp. SKA58]
 gi|94421900|gb|EAT06949.1| hypothetical protein SKA58_16027 [Sphingomonas sp. SKA58]
          Length = 449

 Score = 82.3 bits (201), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 29/229 (12%), Positives = 62/229 (27%), Gaps = 12/229 (5%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           + LFSGG DS      +++  +    +S      +  E        +    L   +K S 
Sbjct: 151 VSLFSGGLDSLIGAIDSVNAGETPLLVS------HAGEGLVSKSQEQCFDGLKAAYKSSA 204

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
            +   + ++    +     +++                G  +            L   N+
Sbjct: 205 FDRLRVWMSFDSGLVEDVESEDTTRGRSFLFFSLGVAAGTALGRDFVLKVPENGLIALNV 264

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
                    +      H    A    +   +     V  P     K E            
Sbjct: 265 P-LDRLRLGALSTRTTHPFYMARWNDLLHALGIAGKVENPYWNKTKGEMVADCA---NPA 320

Query: 192 LVNLILEESHTCYLGKRDKRYEWGY-GCNSCPACYLRQKGWM-EFKEKY 238
           L+  +  +S +C    + +  +     C  C  C +R+     + +  Y
Sbjct: 321 LLKQLSPQSLSCSSPTKGRWKKKPQGHCGYCLPCLIRRASLRGKDRTVY 369


>gi|331701258|ref|YP_004398217.1| tRNA sulfurtransferase [Lactobacillus buchneri NRRL B-30929]
 gi|329128601|gb|AEB73154.1| tRNA sulfurtransferase [Lactobacillus buchneri NRRL B-30929]
          Length = 405

 Score = 81.9 bits (200), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 62/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A ++ SGG DS      A+ R  +++ + F                  K  +L      
Sbjct: 179 RATMMLSGGIDSPVATYLAMKRGVKIDMIHFY------SPPYTGEQALNKAKQLTSVLGK 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G    + +              +   I++       +  +  + L  AA +      T
Sbjct: 233 YSGNIQFIQVPF----------TEIQETIKEKVPEGYLMTIQRRMMLRIAAQITQNRHCT 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +  G      +          + +E+ + +   + + V  PL+ + K E  K+++ I  
Sbjct: 283 GVFTGEALGQVAS---------QTLESMMAINDVTTMPVLRPLVSMDKTEIIKISKQIKT 333

Query: 190 QDLVNLILEE 199
            DL  L  E+
Sbjct: 334 YDLSILPFED 343


>gi|222152884|ref|YP_002562061.1| thiamine biosynthesis protein ThiI [Streptococcus uberis 0140J]
 gi|254784234|sp|B9DU51|THII_STRU0 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|222113697|emb|CAR41642.1| putative thiamine biosynthesis protein [Streptococcus uberis 0140J]
          Length = 404

 Score = 81.9 bits (200), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVEIEAVHF------ASPPYTSPGALKKAQDLTRKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+D       +       +     +     
Sbjct: 231 TKFGGNIQFIEVPF----------TEIQEEIKDKAPEAYLMTLTRRFMMRITDAIRASRS 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+             V  P++ + K E  +LA+ I
Sbjct: 281 GLVIVNGESLGQVASQTLESMQAINAVTAT---------PVIRPVVTMDKLEIIELAEKI 331

Query: 188 GGQDLVNLILEE 199
               +     E+
Sbjct: 332 DTFSISIQPFED 343


>gi|195977998|ref|YP_002123242.1| thiamine biosynthesis protein ThiI [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|195974703|gb|ACG62229.1| thiamine biosynthesis protein ThiI [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 398

 Score = 81.9 bits (200), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      +L R   +E + F                  K  +L  + 
Sbjct: 171 SGKGMLMLSGGIDSPVAGYLSLKRGVEIEAVHF------ASPPYTSPGALTKAKDLTQRL 224

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       L     +  +  
Sbjct: 225 TRFGGNIQFIEVPF----------TEIQEEIKYKAPEAYLMTLTRRFMLRITDAIREKRK 274

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+ +           +  P++ + K E   +AQ I
Sbjct: 275 ALVIINGESLGQVASQTLESMQAINAVTST---------PIIRPVVAMDKLEIIDIAQQI 325

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 326 DTFDISIQPFED 337


>gi|114320195|ref|YP_741878.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226589|gb|ABI56388.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Alkalilimnicola ehrlichii MLHE-1]
          Length = 422

 Score = 81.9 bits (200), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 61/190 (32%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL L SGG DS         R  RV+ L F          + R      ++ L  +   
Sbjct: 205 RALTLLSGGIDSPVAAFLMAKRGCRVDFLHF-----TASPSQQRADADHTVIRLARQLSR 259

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G   +  +             +  M +  +   +  V  R  +       LA RL   
Sbjct: 260 YTGHSRLYMVPY----------DHFDMALHGDQRGHEVVLFRRFVA-RTGEALAKRLRAL 308

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++ G      +          + +E  ++  +   + +  PL+ L K +   + + IG 
Sbjct: 309 ALISGDSLGQVAS---------QTMENMVSTSLAVRMPIMRPLVGLDKADIVAIGRRIGT 359

Query: 190 QDLVNLILEE 199
            D+     ++
Sbjct: 360 YDISIQPYKD 369


>gi|315186810|gb|EFU20568.1| thiamine biosynthesis/tRNA modification protein ThiI [Spirochaeta
           thermophila DSM 6578]
          Length = 394

 Score = 81.5 bits (199), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 53/188 (28%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +LL SGG DS         R   +    F                RKK+  L        
Sbjct: 179 MLLLSGGIDSPVAGYLMAKRGLSLHAAYFH------TYPYTSDDARKKVETLAAILSRWT 232

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G   +  +                + I  +   N          +  A  LA R+G + +
Sbjct: 233 GRVVLHVVPF----------TEAQIHINRHARKNEITLHMRAAMVRIATILAGRVGASCL 282

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           + G      +          +           + + +  PL+ + K E   LA+ IG  +
Sbjct: 283 ITGESLGQVASQTAESMRFTQ---------HTTDLPIFRPLVGMDKQEIIALARRIGTFE 333

Query: 192 LVNLILEE 199
              L   +
Sbjct: 334 TSILPYAD 341


>gi|313890599|ref|ZP_07824227.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pseudoporcinus SPIN 20026]
 gi|313121116|gb|EFR44227.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pseudoporcinus SPIN 20026]
          Length = 404

 Score = 81.5 bits (199), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 53/192 (27%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L    
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRCL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TRFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDAIRQMRN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+ T           +  P++ + K E   +A+ I
Sbjct: 281 GLVIINGESLGQVASQTLESMQAINAVTTT---------PIIRPVVTMDKLEIIAIAEKI 331

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 332 KTFDISIQPFED 343


>gi|325919316|ref|ZP_08181354.1| ExsB protein [Xanthomonas gardneri ATCC 19865]
 gi|325550214|gb|EGD21030.1| ExsB protein [Xanthomonas gardneri ATCC 19865]
          Length = 74

 Score = 81.5 bits (199), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 7/80 (8%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A++L SGG DS+  ++ A ++   V  LS  YGQR+  EL+    V      +  K  
Sbjct: 2  KKAVVLLSGGMDSAAVVALAQEQGFAVHALSVRYGQRHTSELDAAARVATAQGVIAHKVV 61

Query: 69 DSLGEDHILPLAILGDISHS 88
          D       + L  +G  + +
Sbjct: 62 D-------VDLRSIGGSALT 74


>gi|168488522|ref|ZP_02712721.1| NADPH-dependent 7-cyano-7-deazaguanine reductase
           (7-cyano-7-carbaguanine reductase) (preq(0) reductase)
           (nadph-dependentnitrile oxidoreductase) [Streptococcus
           pneumoniae SP195]
 gi|237649171|ref|ZP_04523423.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae CCRI
           1974]
 gi|237820713|ref|ZP_04596558.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae CCRI
           1974M2]
 gi|183572727|gb|EDT93255.1| NADPH-dependent 7-cyano-7-deazaguanine reductase
           (7-cyano-7-carbaguanine reductase) (preq(0) reductase)
           (nadph-dependentnitrile oxidoreductase) [Streptococcus
           pneumoniae SP195]
 gi|332072592|gb|EGI83075.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae GA17570]
          Length = 177

 Score = 81.5 bits (199), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 10/125 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL W +  ++ VE ++F YGQR+ +E++    + K+       
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWVMQHYETVEAVTFAYGQRHHLEIQIAREIAKEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL +++LG I+       + +    + L       +  +F        +  
Sbjct: 57  -----IRHHILDMSLLGQITAQPDFATIHISYIPDKLCVESKSLKLYLFSYRNHGDFHEN 111

Query: 127 GITNI 131
            I  I
Sbjct: 112 CINTI 116


>gi|260583639|ref|ZP_05851387.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Granulicatella elegans ATCC 700633]
 gi|260158265|gb|EEW93333.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Granulicatella elegans ATCC 700633]
          Length = 405

 Score = 81.5 bits (199), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 56/187 (29%), Gaps = 25/187 (13%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           L+ SGG DS      A+ R   V+ + F                  K  +L  K     G
Sbjct: 181 LMLSGGIDSPVAAYLAMKRGMEVQCVHF------ASPPYTSPQALVKTKQLAAKVAIYGG 234

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
                          +     +  +I+     N  +     + L     L  +     I 
Sbjct: 235 ----------SLQFFTVPFTEIQEEIKKAVPENYLMTVMRRMMLRITDQLREKNHGLAIA 284

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
            G      +          + +E+ I +   ++  +  P+  + K +   +AQ+I   +L
Sbjct: 285 NGESVGQVAS---------QTLESMIAINDVTNTPIIRPVATMDKLDIIAIAQEIDTFEL 335

Query: 193 VNLILEE 199
                E+
Sbjct: 336 SIQPFED 342


>gi|331002094|ref|ZP_08325613.1| hypothetical protein HMPREF0491_00475 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330411188|gb|EGG90604.1| hypothetical protein HMPREF0491_00475 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 428

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 66/235 (28%), Gaps = 20/235 (8%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           + +FSGG DS       L+  D        YG   K   E +  +++K        K   
Sbjct: 143 ICMFSGGMDSFIGAIDLLESTDNKTLFVSHYGGG-KGTKEFQDILKEKF------IKKYK 195

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
            E            +    T      +  ++        +  + L+        L I + 
Sbjct: 196 LESRDFHQYYAKVTAGVEDTTRTRSFMFFSHALAVASCLKKSLHLIIPENGFISLNIPST 255

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
                    +      H     +   +   +   V +  P  +  K E      D   + 
Sbjct: 256 F----SRIGTSSTRTTHPHYMTLFQELLDLIGIKVKLDNPYQFKTKGEML---LDCKNKL 308

Query: 192 LVNLILEESHTCYLGK--RDKRYEWGYGCNSCPACYLRQKGWMEFKE----KYQD 240
            V   LE + +C      R ++      C  C  C +RQ   M         Y+D
Sbjct: 309 FVKENLENTMSCSHPDNGRMQKEIEARHCGYCLPCVIRQAAIMHAGIIDNSSYRD 363


>gi|307719269|ref|YP_003874801.1| thiamine biosynthesis protein ThiI [Spirochaeta thermophila DSM
           6192]
 gi|306532994|gb|ADN02528.1| probable thiamine biosynthesis protein ThiI [Spirochaeta
           thermophila DSM 6192]
          Length = 393

 Score = 81.5 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 53/188 (28%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +LL SGG DS         R   +    F                RKK+  L        
Sbjct: 179 MLLLSGGIDSPVAGYLMAKRGLALHAAYFH------TYPYTSDDARKKVETLAAILSRWT 232

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G   +  +                + I  +   N          +  A  LA R+G + +
Sbjct: 233 GRVDLHVVPF----------TEAQIHINRHARKNEITLHMRAAMVRIATILAGRVGASCL 282

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           + G      +          +           + + V  PL+ + K E   LA+ IG  +
Sbjct: 283 ITGESLGQVASQTAESMRFTQ---------HTTDLPVFRPLVGMDKQEIIALARRIGTFE 333

Query: 192 LVNLILEE 199
              L   +
Sbjct: 334 TSILPYAD 341


>gi|307127972|ref|YP_003880003.1| NADPH-dependent 7-cyano-7-deazaguanine reductase [Streptococcus
           pneumoniae 670-6B]
 gi|306485034|gb|ADM91903.1| NADPH-dependent 7-cyano-7-deazaguanine reductase [Streptococcus
           pneumoniae 670-6B]
          Length = 177

 Score = 81.1 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 10/125 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL W +  ++ VE ++F YGQR+ +E++    + K+       
Sbjct: 2   KHQSALVVFSGGQDSTTCLFWVMQHYETVEAVTFAYGQRHHLEIQITREIAKEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL +++LG I+       + +    + L       +  +F+       +  
Sbjct: 57  -----IRHHILDMSLLGQITAQPDFATIHISYIPDKLCVESKSLKLYLFIYRNHGDFHEN 111

Query: 127 GITNI 131
            I  I
Sbjct: 112 CINTI 116


>gi|332199787|gb|EGJ13862.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae GA41317]
          Length = 177

 Score = 81.1 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 10/125 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL W +  ++ VE ++F YGQR+ +E++    + K+       
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWTMQHYETVEAVTFAYGQRHHLEIQIAREIAKEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL +++LG I+       + +    + L       +  +F        +  
Sbjct: 57  -----IRHHILDMSLLGQITAQPDFATIHISYIPDKLCVESKSLKLYLFSYRNHGDFHEN 111

Query: 127 GITNI 131
            I  I
Sbjct: 112 CINTI 116


>gi|149006573|ref|ZP_01830272.1| hypothetical protein CGSSp18BS74_02251 [Streptococcus pneumoniae
           SP18-BS74]
 gi|225859532|ref|YP_002741042.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae 70585]
 gi|225861579|ref|YP_002743088.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298254878|ref|ZP_06978464.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae str.
           Canada MDR_19A]
 gi|298503504|ref|YP_003725444.1| NADPH-dependent 7-cyano-7-deazaguanine reductase [Streptococcus
           pneumoniae TCH8431/19A]
 gi|147761871|gb|EDK68834.1| hypothetical protein CGSSp18BS74_02251 [Streptococcus pneumoniae
           SP18-BS74]
 gi|225721293|gb|ACO17147.1| NADPH-dependent 7-cyano-7-deazaguanine reductase [Streptococcus
           pneumoniae 70585]
 gi|225727586|gb|ACO23437.1| NADPH-dependent 7-cyano-7-deazaguanine reductase [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|298239099|gb|ADI70230.1| NADPH-dependent 7-cyano-7-deazaguanine reductase [Streptococcus
           pneumoniae TCH8431/19A]
 gi|327389943|gb|EGE88288.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae GA04375]
 gi|332072931|gb|EGI83412.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae GA17545]
 gi|332200321|gb|EGJ14394.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae GA47368]
          Length = 177

 Score = 81.1 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 10/125 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WA+  ++ VE ++F YGQ + +E++    + K+       
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWAMQHYETVEAVTFAYGQHHHLEIQIAREIAKEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL +++LG I+       + +    + L       +  +F        +  
Sbjct: 57  -----IRHHILDMSLLGQITAQPDFATIHISYIPDKLCVESKSLKLYLFSYRNHGDFHEN 111

Query: 127 GITNI 131
            I  I
Sbjct: 112 CINTI 116


>gi|296115447|ref|ZP_06834081.1| hypothetical protein GXY_06680 [Gluconacetobacter hansenii ATCC
           23769]
 gi|295978020|gb|EFG84764.1| hypothetical protein GXY_06680 [Gluconacetobacter hansenii ATCC
           23769]
          Length = 448

 Score = 81.1 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 65/229 (28%), Gaps = 12/229 (5%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           + LFSGG DS      +L   +R   +S   G+    + +        +    P+ +   
Sbjct: 149 VNLFSGGLDSLIGAIDSLAADERPLLVSHA-GEGAGSKAQYLCHAA--LKAKFPQRRFEW 205

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
               ++    L +   S  +      +            R    L         L     
Sbjct: 206 VRLPMVFAHDLAEGVGSETSTRARSFLFFAFGVAAGTALRRPFDLKVPENGLIALN---- 261

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V        +      H    A    I   +    ++  P   + K E      D   + 
Sbjct: 262 VPLDPLRLGALSTRTTHPFYMARWREIIAALGIDGSLSNPYWAMTKGEMVDACAD---KP 318

Query: 192 LVNLILEESHTCYLGKRDKRYEWGY-GCNSCPACYLRQKGWME-FKEKY 238
            +  I ++S +C    + +   +    C  C  C +R+    +    +Y
Sbjct: 319 FLMTIADKSISCSSPAKLRWAGYAQGHCGYCVPCLIRRASMPDGDPTRY 367


>gi|139474002|ref|YP_001128718.1| thiamine biosynthesis protein ThiI [Streptococcus pyogenes str.
           Manfredo]
 gi|189030666|sp|A2RF72|THII_STRPG RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|134272249|emb|CAM30501.1| putative thiamine biosynthesis protein [Streptococcus pyogenes str.
           Manfredo]
          Length = 404

 Score = 81.1 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 56/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                  K  +L  + 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGLDIEVVHF------ASPPYTSPGALAKAQDLTRRL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I++       +       +     +  +  
Sbjct: 231 TRFGGNIQFIEVPF----------TEIQEEIKNKAPEAYLMTLTRRFMMRITDAIREQRK 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+ +           +  P++ + K E  ++AQ I
Sbjct: 281 GLVIVNGESLGQVASQTLESMQAINAVTST---------PIIRPVVTMDKLEIIEMAQAI 331

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 332 DTFDISIQPFED 343


>gi|94990196|ref|YP_598296.1| thiamine biosynthesis protein ThiI [Streptococcus pyogenes
           MGAS10270]
 gi|189030664|sp|Q1JHI4|THII_STRPD RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|94543704|gb|ABF33752.1| Thiamine biosynthesis protein thiI [Streptococcus pyogenes
           MGAS10270]
          Length = 404

 Score = 81.1 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 56/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                  K  +L  + 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGLDIEVVHF------ASPPYTSPGALAKAQDLTRRL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I++       +       +     +  +  
Sbjct: 231 TRFGGNIQFIEVPF----------TEIQEEIKNKAPEAYLMTLTRRFMMRITDAIREQRK 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+ +           +  P++ + K E  ++AQ I
Sbjct: 281 GLVIVNGESLGQVASQTLESMQAINAVTST---------PIIRPVVTMDKLEIIEMAQAI 331

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 332 DTFDISIQPFED 343


>gi|94994115|ref|YP_602213.1| thiamine biosynthesis protein ThiI [Streptococcus pyogenes
           MGAS10750]
 gi|189030665|sp|Q1J7A5|THII_STRPF RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|94547623|gb|ABF37669.1| Thiamine biosynthesis protein thiI [Streptococcus pyogenes
           MGAS10750]
          Length = 404

 Score = 81.1 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 56/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                  K  +L  + 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGLDIEVVHF------ASPPYTSPGALAKAQDLTRRL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I++       +       +     +  +  
Sbjct: 231 TRFGGNIQFIEVPF----------TEIQEEIKNKAPEAYLMTLTRRFMMRITDAIREQRK 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+ +           +  P++ + K E  ++AQ I
Sbjct: 281 GLVIVNGESLGQVASQTLESMQAINAVTST---------PIIRPVVTMDKLEIIEMAQAI 331

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 332 DTFDISIQPFED 343


>gi|94988317|ref|YP_596418.1| thiamine biosynthesis protein ThiI [Streptococcus pyogenes
           MGAS9429]
 gi|189030663|sp|Q1JMD8|THII_STRPC RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|94541825|gb|ABF31874.1| thiamine biosynthesis protein [Streptococcus pyogenes MGAS9429]
          Length = 404

 Score = 81.1 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 56/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                  K  +L  + 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGLDIEVVHF------ASPPYTSPGALAKAQDLTRRL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I++       +       +     +  +  
Sbjct: 231 TRFGGNIQFIEVPF----------TEIQEEIKNKAPEAYLMTLTRRFMMRITDAIREQRK 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+ +           +  P++ + K E  ++AQ I
Sbjct: 281 GLVIVNGESLGQVASQTLESMQAINAVTST---------PIIRPVVTMDKLEIIEMAQAI 331

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 332 DTFDISIQPFED 343


>gi|71910444|ref|YP_281994.1| thiamine biosynthesis protein ThiI [Streptococcus pyogenes
           MGAS5005]
 gi|71853226|gb|AAZ51249.1| thiamine biosynthesis protein [Streptococcus pyogenes MGAS5005]
          Length = 404

 Score = 81.1 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 56/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                  K  +L  + 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGLDIEVVHF------ASPPYTSPGALAKAQDLTRRL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I++       +       +     +  +  
Sbjct: 231 TRFGGNIQFIEVPF----------TEIQEEIKNKAPEAYLMTLTRRFMMRITDAIREQRK 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+ +           +  P++ + K E  ++AQ I
Sbjct: 281 GLVIVNGESLGQVASQTLESMQAINAVTST---------PIIRPVVTMDKLEIIEMAQAI 331

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 332 DTFDISIQPFED 343


>gi|71903277|ref|YP_280080.1| thiamine biosynthesis protein ThiI [Streptococcus pyogenes
           MGAS6180]
 gi|94992193|ref|YP_600292.1| thiamine biosynthesis protein ThiI [Streptococcus pyogenes
           MGAS2096]
 gi|123640105|sp|Q48U81|THII_STRPM RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|189030662|sp|Q1JCG0|THII_STRPB RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|71802372|gb|AAX71725.1| thiamine biosynthesis protein [Streptococcus pyogenes MGAS6180]
 gi|94545701|gb|ABF35748.1| Thiamine biosynthesis protein thiI [Streptococcus pyogenes
           MGAS2096]
          Length = 404

 Score = 81.1 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 56/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                  K  +L  + 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGLDIEVVHF------ASPPYTSPGALAKAQDLTRRL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I++       +       +     +  +  
Sbjct: 231 TRFGGNIQFIEVPF----------TEIQEEIKNKAPEAYLMTLTRRFMMRITDAIREQRK 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+ +           +  P++ + K E  ++AQ I
Sbjct: 281 GLVIVNGESLGQVASQTLESMQAINAVTST---------PIIRPVVTMDKLEIIEMAQAI 331

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 332 DTFDISIQPFED 343


>gi|21910086|ref|NP_664354.1| thiamine biosynthesis protein ThiI [Streptococcus pyogenes MGAS315]
 gi|21904277|gb|AAM79157.1| putative thiamine biosynthesis protein [Streptococcus pyogenes
           MGAS315]
          Length = 384

 Score = 81.1 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 56/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                  K  +L  + 
Sbjct: 157 SGKGMLMLSGGIDSPVAGYLALKRGLDIEVVHF------ASPPYTSPGALAKAQDLTRRL 210

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I++       +       +     +  +  
Sbjct: 211 TRFGGNIQFIEVPF----------TEIQEEIKNKAPEAYLMTLTRRFMMRITDAIREQRK 260

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+ +           +  P++ + K E  ++AQ I
Sbjct: 261 GLVIVNGESLGQVASQTLESMQAINAVTST---------PIIRPVVTMDKLEIIEMAQAI 311

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 312 DTFDISIQPFED 323


>gi|19745897|ref|NP_607033.1| thiamine biosynthesis protein ThiI [Streptococcus pyogenes
           MGAS8232]
 gi|50913994|ref|YP_059966.1| thiamine biosynthesis protein ThiI [Streptococcus pyogenes
           MGAS10394]
 gi|306827578|ref|ZP_07460859.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pyogenes ATCC 10782]
 gi|23822242|sp|Q8P1G9|THII_STRP8 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|73919869|sp|Q5XCT0|THII_STRP6 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|19748050|gb|AAL97532.1| putative thiamine biosynthesis protein [Streptococcus pyogenes
           MGAS8232]
 gi|50903068|gb|AAT86783.1| Thiamine biosynthesis protein [Streptococcus pyogenes MGAS10394]
 gi|304430230|gb|EFM33258.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           pyogenes ATCC 10782]
          Length = 404

 Score = 81.1 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 56/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                  K  +L  + 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGLDIEVVHF------ASPPYTSPGALAKAQDLTRRL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I++       +       +     +  +  
Sbjct: 231 TRFGGNIQFIEVPF----------TEIQEEIKNKAPEAYLMTLTRRFMMRITDAIREQRK 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+ +           +  P++ + K E  ++AQ I
Sbjct: 281 GLVIVNGESLGQVASQTLESMQAINAVTST---------PIIRPVVTMDKLEIIEMAQAI 331

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 332 DTFDISIQPFED 343


>gi|28896216|ref|NP_802566.1| thiamine biosynthesis protein ThiI [Streptococcus pyogenes SSI-1]
 gi|30173444|sp|Q8K7Z0|THII_STRP3 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|28811467|dbj|BAC64399.1| putative thiamine biosynthesis protein [Streptococcus pyogenes
           SSI-1]
          Length = 404

 Score = 81.1 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 56/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                  K  +L  + 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGLDIEVVHF------ASPPYTSPGALAKAQDLTRRL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I++       +       +     +  +  
Sbjct: 231 TRFGGNIQFIEVPF----------TEIQEEIKNKAPEAYLMTLTRRFMMRITDAIREQRK 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+ +           +  P++ + K E  ++AQ I
Sbjct: 281 GLVIVNGESLGQVASQTLESMQAINAVTST---------PIIRPVVTMDKLEIIEMAQAI 331

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 332 DTFDISIQPFED 343


>gi|15674858|ref|NP_269032.1| thiamine biosynthesis protein ThiI [Streptococcus pyogenes M1 GAS]
 gi|20140739|sp|Q9A0D8|THII_STRP1 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|13621993|gb|AAK33753.1| putative thiamine biosynthesis protein [Streptococcus pyogenes M1
           GAS]
          Length = 404

 Score = 81.1 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 56/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                  K  +L  + 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGLDIEVVHF------ASPPYTSPGALAKAQDLTRRL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I++       +       +     +  +  
Sbjct: 231 TRFGGNIQFIEVPF----------TEIQEEIKNKAPEAYLMTLTRRFMMRITDAIREQRK 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+ +           +  P++ + K E  ++AQ I
Sbjct: 281 GLVIVNGESLGQVASQTLESMQAINAVTST---------PIIRPVVTMDKLEIIEMAQAI 331

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 332 DTFDISIQPFED 343


>gi|194397564|ref|YP_002038369.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae G54]
 gi|194357231|gb|ACF55679.1| conserved hypothetical protein [Streptococcus pneumoniae G54]
          Length = 177

 Score = 81.1 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 10/125 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WA+  ++ VE ++F YGQR+ +E++    + K+       
Sbjct: 2   KHQSALVVFSGGQDSTTCLFWAMQHYETVEAVTFAYGQRHHLEIQITREIAKEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL +++LG I+       + +    + L       +  +F        +  
Sbjct: 57  -----IRHHILDMSLLGQITAQPDFATIHISYIPDKLCVESKSLKLYLFSYRNHGDFHEN 111

Query: 127 GITNI 131
            I  I
Sbjct: 112 CINTI 116


>gi|332524005|ref|ZP_08400257.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           porcinus str. Jelinkova 176]
 gi|332315269|gb|EGJ28254.1| thiamine biosynthesis/tRNA modification protein ThiI [Streptococcus
           porcinus str. Jelinkova 176]
          Length = 404

 Score = 81.1 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 54/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                 KK  +L    
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHF------ASPPYTSPGALKKAQDLTRCL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I+        +       +     +     
Sbjct: 231 TRFGGNIQFIEVPF----------TEIQEEIKAKAPEAYLMTLTRRFMMRITDAIRQARN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +         I A+ T           +  P++ + K E  +LA+ I
Sbjct: 281 GLVIINGESLGQVASQTLESMQAINAVTTT---------PIIRPVVTMDKLEIIELAEKI 331

Query: 188 GGQDLVNLILEE 199
              ++     E+
Sbjct: 332 DTFNISIQPFED 343


>gi|303254714|ref|ZP_07340816.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae BS455]
 gi|301802471|emb|CBW35229.1| conserved hypothetical protein [Streptococcus pneumoniae INV200]
 gi|302598426|gb|EFL65470.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae BS455]
          Length = 177

 Score = 80.7 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 10/125 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WA+  ++ VE ++F YGQR+ +E++    + K+       
Sbjct: 2   KHQSALVVFSGGQDSTTCLFWAMQHYETVEAVTFAYGQRHHLEIQITREIAKEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL +++LG I+       + +    + L       +  +F        +  
Sbjct: 57  -----IRHHILDMSLLGQITAQPDFAAIHISYIPDKLCVESKSLKLYLFSYRNHGDFHEN 111

Query: 127 GITNI 131
            I  I
Sbjct: 112 CINTI 116


>gi|148984203|ref|ZP_01817498.1| hypothetical protein CGSSp3BS71_03242 [Streptococcus pneumoniae
           SP3-BS71]
 gi|168486380|ref|ZP_02710888.1| NADPH-dependent 7-cyano-7-deazaguanine reductase (nadph-dependent
           nitrile oxidoreductase) [Streptococcus pneumoniae
           CDC1087-00]
 gi|225857369|ref|YP_002738880.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae P1031]
 gi|147923492|gb|EDK74605.1| hypothetical protein CGSSp3BS71_03242 [Streptococcus pneumoniae
           SP3-BS71]
 gi|183570619|gb|EDT91147.1| NADPH-dependent 7-cyano-7-deazaguanine reductase (nadph-dependent
           nitrile oxidoreductase) [Streptococcus pneumoniae
           CDC1087-00]
 gi|225725333|gb|ACO21185.1| NADPH-dependent 7-cyano-7-deazaguanine reductase [Streptococcus
           pneumoniae P1031]
 gi|301800562|emb|CBW33202.1| conserved hypothetical protein [Streptococcus pneumoniae OXC141]
          Length = 177

 Score = 80.7 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 10/125 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WA+  ++ VE ++F YGQR+ +E++    + K+       
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWAMQHYETVEAVTFAYGQRHHLEIQITREIAKEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL +++LG I+       + +    + L       +  +F        +  
Sbjct: 57  -----IRHHILDMSLLGQITAQPDFATIHISYIPDKLCVESKSLKLYLFSYRNHGDFHEN 111

Query: 127 GITNI 131
            I  I
Sbjct: 112 CINTI 116


>gi|332074122|gb|EGI84600.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae GA41301]
          Length = 177

 Score = 80.7 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 10/125 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WA+  ++ VE ++F YGQR+ +E++    + K+       
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWAMQHYETVEAVTFAYGQRHHLEIQITREIAKEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL +++LG I+       + +    + L       +  +F        +  
Sbjct: 57  -----IRHHILDMSLLGQITAQPDFATIHISYIPDKLCVESKSLKLYLFSYRNHGDFHEN 111

Query: 127 GITNI 131
            I  I
Sbjct: 112 CINTI 116


>gi|57640301|ref|YP_182779.1| hypothetical protein TK0366 [Thermococcus kodakarensis KOD1]
 gi|57158625|dbj|BAD84555.1| ThiI-related protein [Thermococcus kodakarensis KOD1]
          Length = 191

 Score = 80.7 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 66/186 (35%), Gaps = 29/186 (15%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL--CVRKKIVELMPKW 67
            A+ L S G DS   +   L R   +  + F   Q +  E +      + K+  +L    
Sbjct: 2   KAVALLSSGIDSPVAIYLMLRRGVEITPIHFR--QDSIKEEKASEIVEILKRYGKLSDPI 59

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +  E+H+                    K+++             + L  A  + + +G
Sbjct: 60  IVNFSEEHV----------------PAFEKLRELGKIKYTCVLCKWLMLRKACRIGHEIG 103

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            + I+ G      +          + ++  + +   S + +  PL+ L K E  ++A++I
Sbjct: 104 ASAIITGDSLGQVAS---------QTLDNLMVVSTASDLPILRPLIGLDKEEIVRIAKEI 154

Query: 188 GGQDLV 193
           G  ++ 
Sbjct: 155 GTFEIS 160


>gi|169833883|ref|YP_001695150.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae
           Hungary19A-6]
 gi|168996385|gb|ACA36997.1| NADPH-dependent 7-cyano-7-deazaguanine reductase [Streptococcus
           pneumoniae Hungary19A-6]
          Length = 177

 Score = 80.7 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 10/125 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WA+  ++ VE ++F YGQR+ +E++    + K+       
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWAMQYYETVEAVTFAYGQRHHLEIQITREIAKEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL +++LG I+       + +    + L       +  +F        +  
Sbjct: 57  -----IRHHILDMSLLGQITAQPDFATIHISYIPDKLCVESKSLKLYLFSYRNHGDFHEN 111

Query: 127 GITNI 131
            I  I
Sbjct: 112 CINTI 116


>gi|290580698|ref|YP_003485090.1| putative thiamine biosynthesis protein [Streptococcus mutans
           NN2025]
 gi|254997597|dbj|BAH88198.1| putative thiamine biosynthesis protein [Streptococcus mutans
           NN2025]
          Length = 405

 Score = 80.7 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 53/190 (27%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +L+ SGG DS      AL R   +E + F                 KK  +L  K   
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVNIEAVHF------ASPPYTSPGALKKAQDLTRKLTK 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G    + +           T+                  R  +  +       R G+ 
Sbjct: 233 FGGNIQFIEVPF---------TEIQEEIKAKAPEAYLMTLTRRFMMRIADRIREERSGLV 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I         S          + +E+   +   +   V  P++ + K E   +A+ I  
Sbjct: 284 IINGESLGQVAS----------QTLESMQAINAVTTTPVIRPVVTMDKLEIIDIAEKIDT 333

Query: 190 QDLVNLILEE 199
             +     E+
Sbjct: 334 FAISIQPFED 343


>gi|24379297|ref|NP_721252.1| thiamine biosynthesis protein ThiI [Streptococcus mutans UA159]
 gi|44888488|sp|Q8DUR1|THII_STRMU RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|24377218|gb|AAN58558.1|AE014926_1 putative thiamine biosynthesis protein [Streptococcus mutans UA159]
          Length = 405

 Score = 80.7 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 53/190 (27%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +L+ SGG DS      AL R   +E + F                 KK  +L  K   
Sbjct: 179 KGMLMLSGGIDSPVAGYLALKRGVNIEAVHF------ASPPYTSPGALKKAQDLTRKLTK 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G    + +           T+                  R  +  +       R G+ 
Sbjct: 233 FGGNIQFIEVPF---------TEIQEEIKAKAPEAYLMTLTRRFMMRIADRIREERSGLV 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I         S          + +E+   +   +   V  P++ + K E   +A+ I  
Sbjct: 284 IINGESLGQVAS----------QTLESMQAINAVTTTPVIRPVVTMDKLEIIDIAEKIDT 333

Query: 190 QDLVNLILEE 199
             +     E+
Sbjct: 334 FAISIQPFED 343


>gi|303258711|ref|ZP_07344691.1| hypothetical protein CGSSp9vBS293_06269 [Streptococcus pneumoniae
           SP-BS293]
 gi|303261875|ref|ZP_07347821.1| hypothetical protein CGSSp14BS292_10694 [Streptococcus pneumoniae
           SP14-BS292]
 gi|303263738|ref|ZP_07349660.1| hypothetical protein CGSSpBS397_07994 [Streptococcus pneumoniae
           BS397]
 gi|303265728|ref|ZP_07351627.1| hypothetical protein CGSSpBS457_09800 [Streptococcus pneumoniae
           BS457]
 gi|303268569|ref|ZP_07354361.1| hypothetical protein CGSSpBS458_09656 [Streptococcus pneumoniae
           BS458]
 gi|302636958|gb|EFL67447.1| hypothetical protein CGSSp14BS292_10694 [Streptococcus pneumoniae
           SP14-BS292]
 gi|302640212|gb|EFL70667.1| hypothetical protein CGSSpBS293_06269 [Streptococcus pneumoniae
           SP-BS293]
 gi|302641848|gb|EFL72203.1| hypothetical protein CGSSpBS458_09656 [Streptococcus pneumoniae
           BS458]
 gi|302644855|gb|EFL75103.1| hypothetical protein CGSSpBS457_09800 [Streptococcus pneumoniae
           BS457]
 gi|302646776|gb|EFL77001.1| hypothetical protein CGSSpBS397_07994 [Streptococcus pneumoniae
           BS397]
          Length = 177

 Score = 80.7 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 10/125 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WA+  ++ VE ++F YGQR+ +E++    + K+       
Sbjct: 2   KHQSALVVFSGGQDSTTCLFWAMQHYETVEAVTFAYGQRHHLEIQITREIAKEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL +++LG I+       + +    + L       +  +F        +  
Sbjct: 57  -----IRHHILDMSLLGQITAQPDFAAIHISYIPDKLCVESKSLKLYLFSYRNHGDFHEN 111

Query: 127 GITNI 131
            I  I
Sbjct: 112 CINTI 116


>gi|259046841|ref|ZP_05737242.1| thiamine biosynthesis protein ThiI [Granulicatella adiacens ATCC
           49175]
 gi|259036464|gb|EEW37719.1| thiamine biosynthesis protein ThiI [Granulicatella adiacens ATCC
           49175]
          Length = 385

 Score = 80.7 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 52/192 (27%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      A+ R   ++ + F                 +K   L  K 
Sbjct: 156 SGRVMLMLSGGIDSPVAGYLAMKRGMEIQCVHF------ASPPYTSPQALEKTKLLAAKI 209

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    L +              +  +I+ +      +       L     L     
Sbjct: 210 ARFGGSIQFLTVPF----------SRIQEEIKKSVPEAYLMTIMRRFMLRITDQLRENAR 259

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I  G      +         I  +             +  P+  + K +  K+A++I
Sbjct: 260 ALAIANGESVGQVASQTLDSMVAINDVTNT---------PIIRPVATMDKLDIIKVAEEI 310

Query: 188 GGQDLVNLILEE 199
              +L     E+
Sbjct: 311 DTFELSIQPFED 322


>gi|66768749|ref|YP_243511.1| hypothetical protein XC_2441 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|66574081|gb|AAY49491.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 428

 Score = 80.7 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/246 (10%), Positives = 68/246 (27%), Gaps = 43/246 (17%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           ++ +    ++ L SGG DS        +   R   +S         +   +    + +  
Sbjct: 135 ELFRPTEDSVCLLSGGMDSLIGAIDLAESGRRSIAVS----NTVPGDGHNQHSFAEAVG- 189

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                                 +  +      +   ++ +     +       L   +  
Sbjct: 190 -------------------FKHLPLNHNASPPSDGSREPSQRARSIIFLAFGVLAATSLQ 230

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIE------------TAINLGMESHVTVHT 170
           AY+ G    +        +  P      + ++              ++       V +  
Sbjct: 231 AYQDGAQVPLFICENGFIALNPPLTGTRLGSLSTRTAHPEFLHGVQSVLDAAGLRVNLIN 290

Query: 171 PLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
           P     K E   ++++   QDL+  +   S +C       R      C  C  C +R+  
Sbjct: 291 PYQHKTKGE---MSRECADQDLLRNLAASSVSC----GRYRRYGYNQCGRCIPCQIRRSA 343

Query: 231 WMEFKE 236
           ++ + +
Sbjct: 344 YLAWGQ 349


>gi|153800916|ref|ZP_01955502.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|124123507|gb|EAY42250.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
          Length = 444

 Score = 80.7 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 60/227 (26%), Gaps = 17/227 (7%)

Query: 11  ALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            + LFSGG DS+      ++    D+   +S  Y    K + + +  +R K  E      
Sbjct: 151 CVSLFSGGLDSAVGAIDMINGSNVDKPLLISHSYKGDGKKQKDIKSLLRGKFSEFSFDIS 210

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             + +         G    S   ++           N      N   +           I
Sbjct: 211 PKIIKSRR------GKTDVSMRGRSFNFIALAVLGVNALRSANNDDSISRIVIPENGY-I 263

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
           +           S      H    +    +   +  ++++  P     K E      D  
Sbjct: 264 SLNPPLTRRRIGSHSTRTTHPFYISRLELLLNKVGFNISLENPYQMKTKGEMVSECVDKV 323

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
                 +    S +C        +     C  C  C +R+    +  
Sbjct: 324 AIKKAVV---LSVSCSN-----WHRKHIQCGRCVPCLIRRAAVFKAG 362


>gi|315230928|ref|YP_004071364.1| thiamine biosynthesis ThiI-like protein [Thermococcus barophilus
           MP]
 gi|315183956|gb|ADT84141.1| thiamine biosynthesis ThiI-like protein [Thermococcus barophilus
           MP]
          Length = 198

 Score = 80.7 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 61/187 (32%), Gaps = 23/187 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+ L S G DS   +   L +   V  + F      K +      V+K   +L   + +
Sbjct: 3   KAVALLSSGIDSPVAIYLMLKKGLEVIPIHF------KQDEGKYKKVQKIWKQLKELYPE 56

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            L E  ++ +              V  KI +                  A  +A   G  
Sbjct: 57  RLKELVVVDV--------YEYQAPVFEKIMEMKKHKWICVFCKFTMYRKATEIARENGAL 108

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I+ G      +          + ++    + + + + +  PL+ L K E  K+A+ IG 
Sbjct: 109 AIITGDSLGQVAS---------QTLDNLFIISLATDLPILRPLIGLDKEEVIKIAKKIGT 159

Query: 190 QDLVNLI 196
            D+    
Sbjct: 160 FDISIEP 166


>gi|326774314|ref|ZP_08233579.1| hypothetical protein SACT1_0074 [Streptomyces cf. griseus
           XylebKG-1]
 gi|326781442|ref|ZP_08240707.1| hypothetical protein SACT1_7340 [Streptomyces cf. griseus
           XylebKG-1]
 gi|326654647|gb|EGE39493.1| hypothetical protein SACT1_0074 [Streptomyces cf. griseus
           XylebKG-1]
 gi|326661775|gb|EGE46621.1| hypothetical protein SACT1_7340 [Streptomyces cf. griseus
           XylebKG-1]
          Length = 445

 Score = 80.7 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 66/239 (27%), Gaps = 33/239 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           + LFSGG DS   +   L+      +  LS   G       +      +   +L   +  
Sbjct: 136 VCLFSGGLDSLCGVIDLLEGNPEQRLYLLSHYEGG------QTPRAQTRLFRQLRAHYGP 189

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +    +           +             +   T    R+++FL  A  +A  +   
Sbjct: 190 RVVSLRLFLRPAPAQPLQARAL---------PHARETTTRSRSLMFLSTALAIASSISPH 240

Query: 130 NIVIGVCETD------------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
             V                    S      H    A+       +     +  P     K
Sbjct: 241 VPVYLPENGYIGVNVPLTRARAGSLSTRTTHPHYLALLEQAKEAIGVPNPLINPYRLKTK 300

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG-CNSCPACYLRQKGWMEFK 235
            E    ++    Q L+  +  ES +C   +  +  E   G C  C  C +R+    +  
Sbjct: 301 GEMLTSSR---NQPLLRELSPESISCSHPEAARYAERAQGNCGYCFPCLIRRASMAKAG 356


>gi|18978207|ref|NP_579564.1| hypothetical protein PF1835 [Pyrococcus furiosus DSM 3638]
 gi|18894018|gb|AAL81959.1| putative thiamin biosynthesis protein thiI [Pyrococcus furiosus DSM
           3638]
          Length = 201

 Score = 80.3 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 65/186 (34%), Gaps = 23/186 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L S G DS   +     R   V  L F      + +      VRK + +L     +
Sbjct: 2   KVVALLSSGIDSPVAIHLMASRGVEVYPLHF------RQDEVKERKVRKVVKKLQEIHGE 55

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            + + H +            +   V  K+++                + A + A ++G +
Sbjct: 56  KVKDPHTVN--------AYEVQAPVFEKLKEIKKGKWTCVFCKYTMYIVAESYAKKVGAS 107

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I+ G      +          + ++  + +   + + V  PL+ L K E  K+A++IG 
Sbjct: 108 AIITGDSLGQVAS---------QTLDNLLVISTATKLPVIRPLIGLDKEEIVKIAKEIGT 158

Query: 190 QDLVNL 195
            ++   
Sbjct: 159 FEISIE 164


>gi|168491358|ref|ZP_02715501.1| NADPH-dependent 7-cyano-7-deazaguanine reductase (nadph-dependent
           nitrile oxidoreductase) [Streptococcus pneumoniae
           CDC0288-04]
 gi|183574270|gb|EDT94798.1| NADPH-dependent 7-cyano-7-deazaguanine reductase (nadph-dependent
           nitrile oxidoreductase) [Streptococcus pneumoniae
           CDC0288-04]
          Length = 177

 Score = 80.3 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 10/125 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WA+  ++ +E ++F YGQR+ +E++    + K+       
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWAMQHYETIEAVTFAYGQRHHLEIQITREIAKEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL +++LG I+       + +    + L       +  +F        +  
Sbjct: 57  -----IRHHILDMSLLGQITTQPDFATIHISYIPDKLCVESKSLKLYLFSYRNHGDFHEN 111

Query: 127 GITNI 131
            I  I
Sbjct: 112 CINTI 116


>gi|312144347|ref|YP_003995793.1| thiamine biosynthesis/tRNA modification protein ThiI [Halanaerobium
           sp. 'sapolanicus']
 gi|311904998|gb|ADQ15439.1| thiamine biosynthesis/tRNA modification protein ThiI [Halanaerobium
           sp. 'sapolanicus']
          Length = 402

 Score = 80.0 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 61/195 (31%), Gaps = 25/195 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +K +   LL+ SGG DS     +AL R  ++  + F                ++K+ +L 
Sbjct: 188 VKSSGQTLLMLSGGIDSPVAGWYALKRGLKIGAVYFH------SPPYTSARAKEKVKDLA 241

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  GE        L     + + + +  K  +       +  R ++ +        
Sbjct: 242 RILSKYGGEIK------LQIPYFTEIQQQIVKKCPEK--YTITIMRRMMVRIANHLAKEN 293

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                 I         S   +    T  A E          + +  PL+   K E  +LA
Sbjct: 294 SQKA-LITGESLGQVASQTLEGIQSTDDASE----------LPILRPLITSDKNEIIELA 342

Query: 185 QDIGGQDLVNLILEE 199
           + I   ++     E+
Sbjct: 343 KKIDSYEISIRPYED 357


>gi|145223466|ref|YP_001134144.1| hypothetical protein Mflv_2879 [Mycobacterium gilvum PYR-GCK]
 gi|145215952|gb|ABP45356.1| hypothetical protein Mflv_2879 [Mycobacterium gilvum PYR-GCK]
          Length = 454

 Score = 80.0 bits (195), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 65/240 (27%), Gaps = 32/240 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           A+ LFSGG DS T +   L+     R+  +S + G +     +                 
Sbjct: 144 AVSLFSGGLDSLTGVIDLLEEDPDRRLCLISHNEGDQASTAQKT--------------LT 189

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +L E +      L  +                    T    R+++FL     LA  +G 
Sbjct: 190 AALREHYGQDRLELRSLFLRPAPAVAGQARPLPPERETTTRARSLLFLTAGLALAASVGP 249

Query: 129 TNIVIGVCETD------------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
              V                    S      H     +       +     +  P     
Sbjct: 250 DVPVYIPENGFIGINVPLTRARSGSYSTRTTHPQFMQLLRTAADAVGVCNPILNPFRLKT 309

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG-CNSCPACYLRQKGWMEFK 235
           K E    ++     +L+  +   S +C   +  +      G C  C  C +R+       
Sbjct: 310 KGEILASSR---NPELLRSLAPNSISCSHPEAARYAVRKQGNCGYCFPCLIRRSSMARVG 366


>gi|269127252|ref|YP_003300622.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thermomonospora curvata DSM 43183]
 gi|268312210|gb|ACY98584.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thermomonospora curvata DSM 43183]
          Length = 414

 Score = 80.0 bits (195), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 58/193 (30%), Gaps = 25/193 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +  AL+L SGG DS       + R  RV+ L F                  K   L+ +
Sbjct: 195 MSGRALVLLSGGIDSPVAAYRMMRRGLRVDYLHF------SGMPFTGPESIYKAYALVRE 248

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G   +  +                 +I+ +      V  +  + L     LA RL
Sbjct: 249 LDRFQGGSRLFVVPFGKA----------QQQIKSSGADRLAVVAQRRLMLRTGEILARRL 298

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   ++ G      S         +              + +  PL+ + K E    A+ 
Sbjct: 299 GGLALITGDSLGQVSSQTLANMTAVDDAVE---------LPILRPLVGMDKVEIMDTARR 349

Query: 187 IGGQDLVNLILEE 199
           IG   +  L  E+
Sbjct: 350 IGTLTISELPDED 362


>gi|261367756|ref|ZP_05980639.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Subdoligranulum variabile DSM 15176]
 gi|282570553|gb|EFB76088.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Subdoligranulum variabile DSM 15176]
          Length = 397

 Score = 80.0 bits (195), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 55/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  AL L SGG DS         R   +  + F             L  + K+ +L  + 
Sbjct: 178 SGRALNLLSGGIDSPVAAWCMARRGLALHHIHF------ASPPYTSLRAKLKVQKLAKEL 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +  G   +  +                  I+D+     F        L  A  +A  L 
Sbjct: 232 VEYTGNCTLFVVPY----------TKPQEYIRDHAPDVLFTVLMRRSMLRIANQVAKNLE 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  ++ G      +             +          + V  P + + K E   L++ I
Sbjct: 282 LQALITGESLAQVASQTMAALVCTDEAQD---------LPVLRPCIGMDKTEIIALSRKI 332

Query: 188 GGQDLVNLILEE 199
           G  D      E+
Sbjct: 333 GTFDTSIEPYED 344


>gi|220916217|ref|YP_002491521.1| PP-loop superfamily ATPase-like protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219954071|gb|ACL64455.1| PP-loop superfamily ATPase-like protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 447

 Score = 80.0 bits (195), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/225 (12%), Positives = 68/225 (30%), Gaps = 17/225 (7%)

Query: 14  LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
           LFSGG DS            ++  +S    Q      +         + ++ +       
Sbjct: 144 LFSGGLDSIVGTYLRSRTAKKLIVVSVHGIQVRASAQQRA-------ITMLQRASFFSVP 196

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
            H +           +     + + +     +        +      T    +G  N  +
Sbjct: 197 LHWV---SFDHQLRHAHPPEKSQRCRGFLFLSIGAAVARTVGASTLHTYENGIGALNPPM 253

Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
            + +            T+ ++E  + +  +  V +  P ++  K E  + A++       
Sbjct: 254 NLAQVGAQNTRAMHPGTLASLEGILEVVQDDPVRLEAPFLFSTKGEMCRDAREHLIPLAQ 313

Query: 194 NLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG-WMEFKEK 237
                 S++C  G    + +    C  C +C LR+   +    +K
Sbjct: 314 A-----SNSCDEG-EHGKPDPAEHCGLCTSCLLRRSALFAALGDK 352


>gi|28378907|ref|NP_785799.1| thiamine biosynthesis protein ThiI [Lactobacillus plantarum WCFS1]
 gi|254557112|ref|YP_003063529.1| thiamine biosynthesis protein ThiI [Lactobacillus plantarum JDM1]
 gi|300769699|ref|ZP_07079582.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
 gi|308181108|ref|YP_003925236.1| thiamine biosynthesis protein ThiI [Lactobacillus plantarum subsp.
           plantarum ST-III]
 gi|38258510|sp|Q88UX4|THII_LACPL RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|28271744|emb|CAD64650.1| thiamine biosynthesis protein ThiI [Lactobacillus plantarum WCFS1]
 gi|254046039|gb|ACT62832.1| thiamine biosynthesis protein ThiI [Lactobacillus plantarum JDM1]
 gi|300492742|gb|EFK27927.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
 gi|308046599|gb|ADN99142.1| thiamine biosynthesis protein ThiI [Lactobacillus plantarum subsp.
           plantarum ST-III]
          Length = 405

 Score = 80.0 bits (195), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 56/190 (29%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +L+ SGG DS       + R   +E + F                  K  +L      
Sbjct: 179 KGMLMLSGGIDSPVAGYLGMKRGVDMEMVHFF------SPPYTSEQALAKAKQLASTLAS 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G    + +              +  +I++       +  +  + +     +  +    
Sbjct: 233 YSGSVKFIQIPF----------TEIQEEIKEKVPEGYLMTVQRRLMMRLMDAITRQRHGK 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +                I +   + + V  P++ + K E  K+A+DI  
Sbjct: 283 AIFNGESLGQVASQTMDSM---------IAINDVTTLPVLRPVISMDKTEIIKIAEDIDT 333

Query: 190 QDLVNLILEE 199
            DL  +  E+
Sbjct: 334 YDLSIMPFED 343


>gi|282165327|ref|YP_003357712.1| probable thiamine biosynthesis protein ThiI [Methanocella
           paludicola SANAE]
 gi|282157641|dbj|BAI62729.1| probable thiamine biosynthesis protein ThiI [Methanocella
           paludicola SANAE]
          Length = 388

 Score = 80.0 bits (195), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 59/213 (27%), Gaps = 29/213 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL-ECRLCVRKKIVEL 63
           +      + L SGG DS       + R   +  + F+ G+ +  +  E  +   KK+ E 
Sbjct: 175 MGSQGKMVALISGGIDSPVAAWLMMRRGCDLIPVFFNNGKFSDKDYTERAMDTIKKLKEW 234

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
            P     + E                   +   +  D             +    A  +A
Sbjct: 235 APGRTFKIYE---------------VPHGDSLREFIDRGNVKYTCVFCKHMMYRTAIEIA 279

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            + G   ++ G      +                          ++ PL+ L K E  ++
Sbjct: 280 KKEGAHGLITGSSLGQVASQTSDNLMIEH---------YRIDFPIYHPLIGLDKNEIVEI 330

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGY 216
           A+ IG  D+         TC           G 
Sbjct: 331 ARKIGTYDISVRPA----TCCKAVPKHPSIHGQ 359


>gi|56807551|ref|ZP_00365472.1| COG0301: Thiamine biosynthesis ATP pyrophosphatase [Streptococcus
           pyogenes M49 591]
 gi|209559185|ref|YP_002285657.1| thiamine biosynthesis protein ThiI [Streptococcus pyogenes NZ131]
 gi|226729112|sp|B5XKV0|THII_STRPZ RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|209540386|gb|ACI60962.1| Probable thiamine biosynthesis protein thiI [Streptococcus pyogenes
           NZ131]
          Length = 404

 Score = 79.6 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 55/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS      AL R   +E + F                  K   L  + 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLALKRGLDIEVVHF------ASPPYTSPGALAKAQNLTRRL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +              +  +I++       +       +     +  +  
Sbjct: 231 TRFGGNIQFIEVPF----------TEIQEEIKNKAPEAYLMTLTRRFMMRITDAIREQRK 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +         I A+ +           +  P++ + K E  ++AQ I
Sbjct: 281 GLVIVNGESLGQVASQTLESMQAINAVTST---------PIIRPVVTMDKLEIIEMAQAI 331

Query: 188 GGQDLVNLILEE 199
              D+     E+
Sbjct: 332 DTFDISIQPFED 343


>gi|239617818|ref|YP_002941140.1| thiamine biosynthesis/tRNA modification protein ThiI [Kosmotoga
           olearia TBF 19.5.1]
 gi|239506649|gb|ACR80136.1| thiamine biosynthesis/tRNA modification protein ThiI [Kosmotoga
           olearia TBF 19.5.1]
          Length = 404

 Score = 79.6 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 66/192 (34%), Gaps = 23/192 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           + SALLL SGG DS     +AL R   +  + F                 +K+++L    
Sbjct: 174 SGSALLLLSGGIDSPVAGWYALKRGITLHAIHF------ASPPYTGEKAFEKVLDLAKAL 227

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +L         +      + + I  N   +  +  +    +  A  +A   G
Sbjct: 228 TKYNGGRDML--------LYRVHFTKLQLAIHRNVRESLSLVIQRRAMMRIATKIAKEHG 279

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +          + IE    +G  + + V  PL    K ET ++A+ I
Sbjct: 280 YKAIVTGENLGQVAS---------QTIENLHTIGSATDILVLRPLTGFDKIETIQIAKKI 330

Query: 188 GGQDLVNLILEE 199
              ++     E+
Sbjct: 331 ETFEISIQPYED 342


>gi|332797466|ref|YP_004458966.1| ExsB family protein [Acidianus hospitalis W1]
 gi|332695201|gb|AEE94668.1| ExsB family protein [Acidianus hospitalis W1]
          Length = 196

 Score = 79.6 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 77/227 (33%), Gaps = 41/227 (18%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKWKDS 70
           LLL+SGG +S+  L       D V+ L  DYGQR  +++ E      +K+ +        
Sbjct: 3   LLLYSGGINSTVALYRFK---DIVDCLFIDYGQRSARMQREMAKYHCEKLGK-------K 52

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           L E HI  L                +              RN+I L  A T A       
Sbjct: 53  LIEIHIPSLGKAFYDGLGMRLNEPIVH-------------RNVILLSIALTYAKERKYDE 99

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           ++      +     D          T   L     V +  P + L K    K+    G +
Sbjct: 100 VIFATASEECLFEKDKPLIIS----TMKRLAEIYGVKLSMPFVNLSKSLLVKMGVKQGIE 155

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                 LE++++C LG +       Y C  C  C  R+  + E   +
Sbjct: 156 ------LEKTYSCLLGHK-------YHCGVCSQCQTRKIAFKEAGVR 189


>gi|313680118|ref|YP_004057857.1| thiamine biosynthesis/tRNA modification protein thii [Oceanithermus
           profundus DSM 14977]
 gi|313152833|gb|ADR36684.1| thiamine biosynthesis/tRNA modification protein ThiI [Oceanithermus
           profundus DSM 14977]
          Length = 388

 Score = 79.6 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 55/189 (29%), Gaps = 25/189 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   ++L SGG DS         R  R   + F             L   +K V  +   
Sbjct: 174 SGKVVVLISGGIDSPVAAWRMAKRGARPVYVHFH------SYPHTSLDSLRKTVAELEVL 227

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +  + +           +V  +I  ++                A   A R G
Sbjct: 228 ARWHGPARLYVVPLA----------DVQEEIFAHSPERYRTLLYRRFMYRIAERAAEREG 277

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +          + +E    +     +TV  PL+ + K E    AQ I
Sbjct: 278 AGALVTGDALGQVAS---------QTLENLHAVERAVAMTVLRPLIGMDKTEVIAEAQRI 328

Query: 188 GGQDLVNLI 196
           G  ++    
Sbjct: 329 GTYEISIQP 337


>gi|146304331|ref|YP_001191647.1| ExsB family protein [Metallosphaera sedula DSM 5348]
 gi|145702581|gb|ABP95723.1| ExsB family protein [Metallosphaera sedula DSM 5348]
          Length = 199

 Score = 79.6 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 77/234 (32%), Gaps = 44/234 (18%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL-ECRLCVRKKIVELMPKWK 68
            +L L SGG DS+  +    +       ++ DYGQR   E  +      +K+ + + +  
Sbjct: 2   KSLFLVSGGLDSTAGMYRFREMDYDC--MTIDYGQRAFKEQVKYARINCEKLGKRLIEVN 59

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                D       L                    +P+  +  RN + + FA T A  +G 
Sbjct: 60  MKKVGDRFREGKSL--------------------IPHEPIRHRNAVTIPFALTYASEMGY 99

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
           + + +     +         +    I     L     + +  P + L K    ++  + G
Sbjct: 100 SAVYVFTVSEECQYE----SNKPEIISALRKLAEALRIGLIFPFLGLSKAHVLRMGIEHG 155

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM----EFKEKY 238
              L       +++C LG R         C  C  C  R+  +     + K KY
Sbjct: 156 MDPL------NTYSCLLGHRA-------HCGRCSQCESRKMAFKIAGVDDKTKY 196


>gi|227529667|ref|ZP_03959716.1| thiamine-phosphate kinase [Lactobacillus vaginalis ATCC 49540]
 gi|227350457|gb|EEJ40748.1| thiamine-phosphate kinase [Lactobacillus vaginalis ATCC 49540]
          Length = 400

 Score = 79.6 bits (194), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 55/190 (28%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +++ SGG DS       + R   +E + F                  K  +L  K   
Sbjct: 174 KGMMMLSGGIDSPVAAYLGMKRGVSMEMVHFF------SPPYTSPQALAKAKQLTEKLAR 227

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G    + +              +   +++       +  +  + L  AA L  +    
Sbjct: 228 YSGSIKFIQVPFA----------EIQETVKEKVPEGYLMTVQRRMMLRLAAALTMKRHGL 277

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G      +                + +   + + V  P++   K E   +A+ I  
Sbjct: 278 AIFNGESLGQVASQTMESM---------LVINDVTSLPVLRPVLSYDKTEIIDVAKKIDT 328

Query: 190 QDLVNLILEE 199
            DL  L  E+
Sbjct: 329 YDLSILPYED 338


>gi|119486550|ref|ZP_01620600.1| hypothetical protein L8106_12405 [Lyngbya sp. PCC 8106]
 gi|119456167|gb|EAW37299.1| hypothetical protein L8106_12405 [Lyngbya sp. PCC 8106]
          Length = 488

 Score = 79.6 bits (194), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 76/231 (32%), Gaps = 18/231 (7%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           + L+SGG D+   L   L     V  + F  G  +K     +  V + I++  P      
Sbjct: 158 VALWSGGLDALAGLYTRLQTSHTVPFMLFGTGS-SKSVYARQEKVFQAIIKSFPTHLY-- 214

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
                +P+  L            A  +    L            L         +G  N+
Sbjct: 215 --LCRVPINFLNSKLLRKNKITRARGVVFTLLGAACAYLMGQRTLSVYEN---GIGAINL 269

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
                             T+  +   ++  +  +  V+ P ++L K +  +   +    D
Sbjct: 270 PYRASAVGLDHSRSVHPLTLLMVSDVVSELLGENFRVYNPFLFLTKAQICRALAENQEND 329

Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW----MEFKEKY 238
           LV +    + +C    R ++ +    C  C +C LR++      +E K +Y
Sbjct: 330 LVAI----TQSC--DSRHRKSQQPTQCGYCSSCILRKQALAASKIEDKTRY 374


>gi|307297793|ref|ZP_07577599.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermotogales
           bacterium mesG1.Ag.4.2]
 gi|306917053|gb|EFN47435.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermotogales
           bacterium mesG1.Ag.4.2]
          Length = 404

 Score = 79.6 bits (194), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 58/192 (30%), Gaps = 23/192 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  ALLL SGG DS      A  R   ++ + F                  K++ L    
Sbjct: 174 SGRALLLLSGGIDSPVAGWLAQKRGLDLDAIHF------SSPPYTGERSFDKVLSLAKTL 227

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G             S       +A+        +     R ++ +      A R+ 
Sbjct: 228 SIYNGG------REFRLYSMHFTDAQIAVHKHVEERYSLVCQRRLMMKIASKIAEAQRII 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                            +      + +E    +  ++ + V  PL+   K ET +LA+ I
Sbjct: 282 AIV-----------TGENLGQVASQTLENLRVIEEQTELIVLRPLLSYDKIETIELAKQI 330

Query: 188 GGQDLVNLILEE 199
           G  +   L  E+
Sbjct: 331 GTFETSILPYED 342


>gi|167756870|ref|ZP_02428997.1| hypothetical protein CLORAM_02419 [Clostridium ramosum DSM 1402]
 gi|237734580|ref|ZP_04565061.1| thiamine biosynthesis protein thiI [Mollicutes bacterium D7]
 gi|167703045|gb|EDS17624.1| hypothetical protein CLORAM_02419 [Clostridium ramosum DSM 1402]
 gi|229382400|gb|EEO32491.1| thiamine biosynthesis protein thiI [Coprobacillus sp. D7]
          Length = 398

 Score = 79.6 bits (194), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 61/190 (32%), Gaps = 24/190 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            ALL+ SGG DS       L R   +E + F                R+K+ +L+ K + 
Sbjct: 178 KALLMMSGGIDSPVAGYLTLKRGVDIECIHF------AAPPYTNELAREKVFDLVDKLRH 231

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                  + +              + + + DN   +  +     +    +  +A +    
Sbjct: 232 YTHGSIRVHVINF---------TKLQLAVYDNCDESYAMTVMRRMMYRISEKIANKNNCL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      +          + + +   +     + V  P++ L K E   +A  I  
Sbjct: 283 ALVNGESIGQVAS---------QTLNSMQVINEVVKIPVLRPVLCLDKLEIIDIADRIDT 333

Query: 190 QDLVNLILEE 199
            ++     E+
Sbjct: 334 YEISIRPHED 343


>gi|71907831|ref|YP_285418.1| hypothetical protein Daro_2209 [Dechloromonas aromatica RCB]
 gi|71847452|gb|AAZ46948.1| hypothetical protein Daro_2209 [Dechloromonas aromatica RCB]
          Length = 457

 Score = 79.2 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 56/228 (24%), Gaps = 14/228 (6%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           A+ LFSGG DS       L+       +S      +  E             L   +   
Sbjct: 150 AVSLFSGGLDSLIGAIDLLEAGRTPLLVS------HAGEGATSDAQNVLFAALKKHFSAV 203

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
             +   + +    D+     ++N                G  +            L   N
Sbjct: 204 AFDRLRVWMLFPADLVQGVSSENSTRGRSFLFFALGVFAGTGLGTDFVLRVPENGLIALN 263

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           + +       S      H    A    +   +     V  P     K E   +A      
Sbjct: 264 VPLDP-LRLGSNSTRTTHPYYIARWNDLLGHLGISGRVENPYWAKTKGE---MASACANP 319

Query: 191 DLVNLILEESHTCYLGKRDK----RYEWGYGCNSCPACYLRQKGWMEF 234
            L+  +   + +C      +    +      C  C  C +R+      
Sbjct: 320 VLLKALAPYALSCAHAANARHLGIKGRGIEQCGYCLPCLIRRAALDAA 367


>gi|299132780|ref|ZP_07025975.1| conserved hypothetical protein [Afipia sp. 1NLS2]
 gi|298592917|gb|EFI53117.1| conserved hypothetical protein [Afipia sp. 1NLS2]
          Length = 314

 Score = 78.8 bits (192), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 27/222 (12%), Positives = 56/222 (25%), Gaps = 11/222 (4%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           + LFSGG DS       L+       +S      +  E        +    L   +  S 
Sbjct: 16  VSLFSGGLDSLIGAIDTLEGNGVPLLVS------HAGEGLVSKSQERCFDGLKAAYPGST 69

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
                + ++    +     +++                G  +            L   N+
Sbjct: 70  FNRLRVWMSFDAGLFDDVASEDTTRGRSFLFFSLGVTAGTCLASPFVLKVPENGLIALNV 129

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
                    +      H    A    +   +     +  P     K E          Q 
Sbjct: 130 P-LDRLRLGALSTRTTHPFYIARWNEMLAALGVGGRIDNPYWDKTKGEMVAACAS---QA 185

Query: 192 LVNLILEESHTCYLGKRDKRYEWGY-GCNSCPACYLRQKGWM 232
           +++ +   S +C    + +  +     C  C  C +R+    
Sbjct: 186 VLSKLAPSSLSCSSPTKGRWTKQPQGHCGFCLPCLIRRAALE 227


>gi|291280317|ref|YP_003497152.1| thiamine biosynthesis protein ThiI [Deferribacter desulfuricans
           SSM1]
 gi|290755019|dbj|BAI81396.1| thiamine biosynthesis protein ThiI [Deferribacter desulfuricans
           SSM1]
          Length = 389

 Score = 78.8 bits (192), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 51/186 (27%), Gaps = 24/186 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L SGG DS       + R   V  L F               +  KI  L+     
Sbjct: 178 KVVSLLSGGIDSPVATWLMMKRGCEVIPLHFH------TPPYTGNKLTDKIERLVKTLSL 231

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                  L +              + + I+                L  A  +A  L   
Sbjct: 232 YSVNGITLYMINF---------TQIQIAIKKYAHDKFTTILSRRFMLKIANNIATNLNAL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I+ G      +          + +E    +   S++ V  PL+   K E   LA+ IG 
Sbjct: 283 GIITGDALGQVAS---------QTLENLYCVNEASNLPVFRPLIGFDKQEIENLAKKIGT 333

Query: 190 QDLVNL 195
             +   
Sbjct: 334 YPISIE 339


>gi|304314038|ref|YP_003849185.1| thiamine biosynthesis protein [Methanothermobacter marburgensis
           str. Marburg]
 gi|302587497|gb|ADL57872.1| predicted thiamine biosynthesis protein [Methanothermobacter
           marburgensis str. Marburg]
          Length = 380

 Score = 78.8 bits (192), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 55/188 (29%), Gaps = 25/188 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L SGG DS       + R  +V  +  D                 K+ ++  K ++
Sbjct: 170 KVVALLSGGIDSPVATYLLMKRGCQVVAVHTD------NSPFTAPESLDKVEKIASKLEE 223

Query: 70  S-LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G +  L +   G             K +     N             A  +A   G 
Sbjct: 224 YSAGVEFKLRIFRYGSYL---------EKCRREAPENMTCVLCKAGMYRLAEMVAEEEGA 274

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             IV G      +                +   M   + V +PL+ + K E   LA+ IG
Sbjct: 275 LAIVDGSSLGQVASQTLP---------NILATRMAVRMPVLSPLIGMDKVEIEALAKRIG 325

Query: 189 GQDLVNLI 196
             D+  + 
Sbjct: 326 TYDISVIP 333


>gi|167972831|ref|ZP_02555108.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
           urealyticum serovar 5 str. ATCC 27817]
 gi|167973688|ref|ZP_02555965.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
           urealyticum serovar 11 str. ATCC 33695]
 gi|167975847|ref|ZP_02558124.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
           urealyticum serovar 12 str. ATCC 33696]
 gi|167987875|ref|ZP_02569546.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
           urealyticum serovar 7 str. ATCC 27819]
 gi|168362962|ref|ZP_02696136.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
           urealyticum serovar 13 str. ATCC 33698]
 gi|195867835|ref|ZP_03079835.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
           urealyticum serovar 9 str. ATCC 33175]
 gi|198273832|ref|ZP_03206366.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
           urealyticum serovar 4 str. ATCC 27816]
 gi|209554375|ref|YP_002284855.1| thiamine biosynthesis protein ThiI [Ureaplasma urealyticum serovar
           10 str. ATCC 33699]
 gi|225550847|ref|ZP_03771796.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
           urealyticum serovar 2 str. ATCC 27814]
 gi|225551110|ref|ZP_03772056.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
           urealyticum serovar 8 str. ATCC 27618]
 gi|226729111|sp|B5ZBR5|THII_UREU1 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|171903050|gb|EDT49339.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
           urealyticum serovar 13 str. ATCC 33698]
 gi|184209214|gb|EDU06257.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
           urealyticum serovar 5 str. ATCC 27817]
 gi|188019084|gb|EDU57124.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
           urealyticum serovar 7 str. ATCC 27819]
 gi|188998032|gb|EDU67129.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
           urealyticum serovar 11 str. ATCC 33695]
 gi|195660119|gb|EDX53499.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
           urealyticum serovar 12 str. ATCC 33696]
 gi|195660532|gb|EDX53789.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
           urealyticum serovar 9 str. ATCC 33175]
 gi|198249587|gb|EDY74369.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
           urealyticum serovar 4 str. ATCC 27816]
 gi|209541876|gb|ACI60105.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
           urealyticum serovar 10 str. ATCC 33699]
 gi|225378925|gb|EEH01290.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
           urealyticum serovar 8 str. ATCC 27618]
 gi|225380001|gb|EEH02363.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
           urealyticum serovar 2 str. ATCC 27814]
          Length = 392

 Score = 78.8 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 54/195 (27%), Gaps = 22/195 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              AL+L SGG DS       + R   V+ ++F                  K + L  + 
Sbjct: 174 NGKALVLLSGGIDSPVASRLIMKRGISVDFITF------ITPPHTSQKALDKTIALAKQI 227

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +        L        +       +           +  R  + +      A  + 
Sbjct: 228 TLNN------HLTKANLYVCNFTKLQEEIAHISKESYRITLMRRYFMRIAKRL--AIDIK 279

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +        TI ++             V  PL+   K E   LA+  
Sbjct: 280 AGALVTGEALGQVASQTLNSMQTISSVLND--------FLVLRPLITYDKQEIISLAKQF 331

Query: 188 GGQDLVNLILEESHT 202
              +L  L  ++S +
Sbjct: 332 NTYELSILPYDDSCS 346


>gi|242398344|ref|YP_002993768.1| ThiI thiamin biosynthesis protein thiI [Thermococcus sibiricus MM
           739]
 gi|242264737|gb|ACS89419.1| ThiI thiamin biosynthesis protein thiI [Thermococcus sibiricus MM
           739]
          Length = 208

 Score = 78.8 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 69/194 (35%), Gaps = 26/194 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+ L S G DS   +   L +   V  + F    +++V  +    +  ++ EL P   +
Sbjct: 13  KAVALLSSGIDSPVAIYLMLKKGFTVYPIHF---MQSEVNHQKVRRIWMRLKELYPDSLE 69

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            L             +      K +  K+ +               L+ AA +A      
Sbjct: 70  ELI-----------AVDAFEYQKPIFDKLIELKKEKWICIFCKFSMLMKAAEIAKEKNAM 118

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I+ G      +          + ++  + + + + + V  PL+ + K E  K+A++IG 
Sbjct: 119 VIITGDSLGQVAS---------QTLDNLLIISLATDLPVLRPLIGMDKVEIEKIAKEIGT 169

Query: 190 QDLVNLILEESHTC 203
            ++     E   +C
Sbjct: 170 FEISIEPEE---SC 180


>gi|329723264|gb|EGG59794.1| ExsB [Staphylococcus epidermidis VCU144]
          Length = 83

 Score = 78.8 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 25/59 (42%), Positives = 36/59 (61%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
          M+        AL++FSGGQDS+TCL +A   F  VE ++F+YGQR+  E+E      K+
Sbjct: 1  MSQNDLNKEKALVVFSGGQDSTTCLFYAKKHFKEVELVTFNYGQRHDKEIEVAKKNCKR 59


>gi|258593519|emb|CBE69860.1| putative thiamine biosynthesis protein thiI [NC10 bacterium 'Dutch
           sediment']
          Length = 400

 Score = 78.8 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 59/184 (32%), Gaps = 25/184 (13%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
            L SGG DS       + R  R+  + F        +       + K +EL+        
Sbjct: 190 CLLSGGIDSPVAAYRMMKRGCRIVFIHFH------SQPFADRTSQDKAIELVRLLTRCQF 243

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
              +  +              +  ++  +      VP    + L  A  +A + G   +V
Sbjct: 244 TSRLYLVPF----------GEIQQEVVAHVTGRLRVPVYRRLMLRIAEQIARKEGAQALV 293

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
            G      S          + IE    +   S + +  PL+ + K E  + AQ IG  D+
Sbjct: 294 TGESLGQVSS---------QTIENISTIEQVSTLPILRPLIGMDKDEITQQAQQIGSYDV 344

Query: 193 VNLI 196
             + 
Sbjct: 345 SIIP 348


>gi|182684725|ref|YP_001836472.1| hypothetical protein SPCG_1755 [Streptococcus pneumoniae CGSP14]
 gi|182630059|gb|ACB91007.1| hypothetical protein SPCG_1755 [Streptococcus pneumoniae CGSP14]
          Length = 190

 Score = 78.8 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 10/125 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL WA+  ++ VE ++F YGQR+ +E++      K+       
Sbjct: 15  KRQSALVVFSGGQDSTTCLFWAMQHYETVEAVTFAYGQRHHLEIQITRETAKEQG----- 69

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL +++LG I+       + +    + L       +  +F        +  
Sbjct: 70  -----IRHHILDMSLLGQITAQPDFATIHISYIPDKLCVESKSLKLYLFSYRNHGDFHEN 124

Query: 127 GITNI 131
            I  I
Sbjct: 125 CINTI 129


>gi|154151526|ref|YP_001405144.1| hypothetical protein Mboo_1987 [Candidatus Methanoregula boonei
           6A8]
 gi|154000078|gb|ABS56501.1| thiamine biosynthesis protein [Methanoregula boonei 6A8]
          Length = 213

 Score = 78.8 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 56/187 (29%), Gaps = 24/187 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L SGG DS       L +   +  +  D         E  L     ++  +     
Sbjct: 3   KLVSLISGGIDSPVAAYLMLHQGVEIIAVHMD---NRPFTDEKNLHKAMNLIRHLQHLTQ 59

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              + +++P                 +    N   +        +    A  +A + G  
Sbjct: 60  RPIKTYVVPHG------------PNHIAFARNCERHLHCLFCRRMMYRIAERIAEKEGAV 107

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I+ G      +          + ++  +   +   + V  PL+ + K E   +A+ IG 
Sbjct: 108 GILTGESLGQVAS---------QTLQNLMVENLVIRIPVVRPLIGMDKVEIIDIARRIGT 158

Query: 190 QDLVNLI 196
            ++  L 
Sbjct: 159 YEISTLP 165


>gi|145344203|ref|XP_001416626.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144576852|gb|ABO94919.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 714

 Score = 78.8 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 25/204 (12%), Positives = 57/204 (27%), Gaps = 25/204 (12%)

Query: 1   MNDIIKKAPSAL-LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           M D + +  +++ +  SGG DS         +   V TL  DY  R +   E        
Sbjct: 245 MRDRMSEFGNSIAVSLSGGVDSMVLAYILKHQGYDVVTLHIDYKNRPESTEEA------- 297

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                         D +   ++   +     T +   +             R        
Sbjct: 298 --------------DFVDDWSLRHGMKFERCTVDQIRRGVTPREQYEIESRRIRYGFYKE 343

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPD-CRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
           A   +      +     +   +   +  R   + ++    + G+   V +  P++   K 
Sbjct: 344 AGAKHGFPAVLLGHHHGDVQENIITNLMRGANLLSVNGMSDEGVVEGVRIWRPMLSHVKD 403

Query: 179 ETWKLAQDIGGQDLVNLILEESHT 202
           +    A   G    ++     + +
Sbjct: 404 DVLTFAHAYGIPYFLDS--TPTWS 425


>gi|332201182|gb|EGJ15253.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae GA47901]
          Length = 177

 Score = 78.4 bits (191), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 10/125 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL W +  ++ VE ++F YGQR+ +E++    + K+       
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWTMQHYETVEAVTFAYGQRHHLEIQITREIAKEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL +++LG I+       + +    + L       +  +F        +  
Sbjct: 57  -----IRHHILDMSLLGQITAQPDFATIHISYIPDKLCVESKSLKLYLFSYRNHGDFHEN 111

Query: 127 GITNI 131
            I  I
Sbjct: 112 CINTI 116


>gi|310658748|ref|YP_003936469.1| thiamine biosynthesis protein thii [Clostridium sticklandii DSM
           519]
 gi|308825526|emb|CBH21564.1| putative thiamine biosynthesis protein thiI [Clostridium
           sticklandii]
          Length = 394

 Score = 78.4 bits (191), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 54/187 (28%), Gaps = 24/187 (12%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +L SGG DS         R   +E + F                ++KI++L        G
Sbjct: 184 ILLSGGIDSPVAAYLMSKRGLYIEAVHFH------SFPFTSEKSQEKIMDLARTLLPYTG 237

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           +  I  + +L           +   I +N              +  A  +A       ++
Sbjct: 238 QIKIHMVNLL----------EIQQSIAENCPEELMTILSRRFMMAIAERIATETECNCLI 287

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
            G      +                +         V  PL+   K +   LA++I   D+
Sbjct: 288 TGESMGQVASQTAEGLLATNNAVKLL--------PVFRPLISYDKEDIITLAKEIDTFDV 339

Query: 193 VNLILEE 199
             +  E+
Sbjct: 340 SIIPEED 346


>gi|83951084|ref|ZP_00959817.1| hypothetical protein ISM_08280 [Roseovarius nubinhibens ISM]
 gi|83838983|gb|EAP78279.1| hypothetical protein ISM_08280 [Roseovarius nubinhibens ISM]
          Length = 228

 Score = 78.0 bits (190), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 77/230 (33%), Gaps = 15/230 (6%)

Query: 1   MNDIIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           M    KK   + L++ SGG DS+  L+ AL   + +  +   +    +          KK
Sbjct: 1   MTKRPKKPKFTRLIMLSGGIDSTFLLAQALRETEDLVLVHHVHLINLEGRHRAEAHACKK 60

Query: 60  IVELMPK-WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
           IVE   + ++D +  +  +  + L  + +  +T      I   N         +   L F
Sbjct: 61  IVEYCRRNYRDFVYTESTVDRSGLYAMGYDVITVASEAGIAATNHLLETGGMADFWMLGF 120

Query: 119 AATLAY-RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
               A+      + V      D +      +     +         +    +   +   K
Sbjct: 121 NLEEAHDAEEENDEVGLSASGDQAAQRPATNRLPYILAAIAATCFPNAPPKYLRPILQPK 180

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG-CNSCPACYL 226
            E         GQDLV+L      TC   +R  R + G+  C  C  C L
Sbjct: 181 RELMDYM----GQDLVDLC----WTC---RRPVRTDQGFHECGECKTCKL 219


>gi|325971154|ref|YP_004247345.1| tRNA sulfurtransferase [Spirochaeta sp. Buddy]
 gi|324026392|gb|ADY13151.1| tRNA sulfurtransferase [Spirochaeta sp. Buddy]
          Length = 399

 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 56/190 (29%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +LL SGG DS         R  ++E + F                 +K+  L      
Sbjct: 181 KGMLLLSGGIDSPVAAYRMAQRGLKMECIYFH------AYPYTSDQALEKVKTLASIIAP 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            L    +  +                + I+ ++  +          +  A  ++ +    
Sbjct: 235 YLQGTRLHVVPF----------TEAQLWIKQHSQEDETTLMFRASMMKVANAISLQQEGN 284

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G   +  +           ++   +         V  PL+ + K E   LA+ IG 
Sbjct: 285 CIVTGEALSQVASQTLESMSFTDSMSDQL---------VLRPLVGMNKQEIMDLAKRIGT 335

Query: 190 QDLVNLILEE 199
            +   L  E+
Sbjct: 336 YETSILPYED 345


>gi|169350211|ref|ZP_02867149.1| hypothetical protein CLOSPI_00955 [Clostridium spiroforme DSM 1552]
 gi|169292994|gb|EDS75127.1| hypothetical protein CLOSPI_00955 [Clostridium spiroforme DSM 1552]
          Length = 398

 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 59/190 (31%), Gaps = 24/190 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            ALL+ SGG DS       L R   +E + F                R+K+++L+ K + 
Sbjct: 178 KALLMMSGGIDSPVAGYLTLKRGVDIECIHF------AAPPYTNELAREKVLDLVDKLRH 231

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                  + +              + + + D+   +  +     +    +  +A +    
Sbjct: 232 YTHGQIKVHIVNF---------TKLQLAVYDHCDESYAMTVMRRMMYRISEIVANKNHCL 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      +                  +     + V  P++ L K E   +A  I  
Sbjct: 283 ALVNGESIGQVASQTLDSMQ---------VINEVVKIPVLRPVLCLDKLEIIDIANAIDT 333

Query: 190 QDLVNLILEE 199
            ++     E+
Sbjct: 334 YEISIRPHED 343


>gi|330834525|ref|YP_004409253.1| ExsB family protein [Metallosphaera cuprina Ar-4]
 gi|329566664|gb|AEB94769.1| ExsB family protein [Metallosphaera cuprina Ar-4]
          Length = 197

 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 75/229 (32%), Gaps = 40/229 (17%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC-RLCVRKKIVELMPKWK 68
            +L L SGG DS++ +    D       +  +YGQR+  +          K+ +      
Sbjct: 2   KSLFLVSGGLDSTSGMFRYKDIDYDC--MIINYGQRSYRQQRKYAEINCNKLEK------ 53

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               +  +L    +G+  +   T                +  RN   +      A   G 
Sbjct: 54  ----KLIVLDARGIGEAFNRDKTLIPHEP----------ILHRNAAIIPIVLVYASERGY 99

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
           +++ + +   +    P+             +L    +V +  P + L K +  K+  + G
Sbjct: 100 SDVYVFIVSEECKYEPNKPKVLSL----LSSLAETLNVKLVFPFIGLPKAQVLKIGMNHG 155

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                      +++C LG R         C  C  C  R++ ++    K
Sbjct: 156 MNP------ANTYSCILGHR-------CHCGKCSQCEARKQAFINAGVK 191


>gi|284929681|ref|YP_003422203.1| preQ(0) biosynthesis protein QueC [cyanobacterium UCYN-A]
 gi|284810125|gb|ADB95822.1| preQ(0) biosynthesis protein QueC [cyanobacterium UCYN-A]
          Length = 181

 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 8/157 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           A++L SGG DS+T  + A  +  ++  LS  YGQ +  ELE    + K++        D 
Sbjct: 7   AVVLLSGGLDSATSAAIAAAQGYKLVALSLRYGQLHHKELESAKTIAKELDINSHYIID- 65

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQD-NNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 + +A  G  S +  + ++ +     +N+P+T+VPGRN +F+  A +LA   G  
Sbjct: 66  ------VDIAQWGGSSLTDESLSIPLDGVSPHNIPSTYVPGRNTVFIALALSLAEAKGAK 119

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV 166
            I +G+   DYSGYPDCR + ++A +   N+  ++ +
Sbjct: 120 AIFLGINMIDYSGYPDCRSEYLKAYQDLANISSKAGI 156


>gi|304439798|ref|ZP_07399696.1| thiamine biosynthesis/tRNA modification protein ThiI [Peptoniphilus
           duerdenii ATCC BAA-1640]
 gi|304371785|gb|EFM25393.1| thiamine biosynthesis/tRNA modification protein ThiI [Peptoniphilus
           duerdenii ATCC BAA-1640]
          Length = 388

 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 56/181 (30%), Gaps = 25/181 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS         R  +V+ L F                 +K+++L        G   I  
Sbjct: 188 IDSPVAGYMMAKRGVKVDALHFH------SFPFTSKRAEEKVIKLGEIVSSYSGPMKIYS 241

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
           + IL           +  +I  +   +          +  A +++ + G  +I+ G    
Sbjct: 242 VNIL----------PIQKEINKHCHESQMTVLSRRFMMRIAESISAKNGYKSIITGENLG 291

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
             +           AI   +         V  PL+ + K +  ++++ IG  +   L  E
Sbjct: 292 QVASQTIEGLACTDAITDRL---------VFRPLIGMDKVDIIEISKRIGTYETSILPFE 342

Query: 199 E 199
           +
Sbjct: 343 D 343


>gi|81428457|ref|YP_395457.1| thiamine biosynthesis ATP pyrophosphorylase [Lactobacillus sakei
           subsp. sakei 23K]
 gi|123564348|sp|Q38XD3|THII_LACSS RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|78610099|emb|CAI55148.1| Thiamine biosynthesis ATP pyrophosphorylase [Lactobacillus sakei
           subsp. sakei 23K]
          Length = 405

 Score = 78.0 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 58/190 (30%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +L+ SGG DS       L R   +E + F                  K  EL  K   
Sbjct: 179 KGMLMLSGGIDSPVAGYLTLKRGVDIEMVHFF------SPPYTSDNALNKAKELTAKLVP 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G    + +                +K          +  R ++ L      A R G+ 
Sbjct: 233 YVGGIKFIEVPF--------TEIQEEVKHSVPEGYLMTIQRRMMLRLTDQ-IRAKRQGLA 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                      S          + +E+ + +   +   +  P+  + K E  ++A+DI  
Sbjct: 284 IFNGESVGQVAS----------QTLESMMAINDVTTTPIVRPVATMDKNEIIEIAKDIDT 333

Query: 190 QDLVNLILEE 199
            DL  +  E+
Sbjct: 334 YDLSIMPFED 343


>gi|16119251|ref|NP_395957.1| hypothetical protein Atu5020 [Agrobacterium tumefaciens str. C58]
 gi|15161751|gb|AAK90398.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 444

 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/230 (12%), Positives = 59/230 (25%), Gaps = 20/230 (8%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDR-VETLSFDYGQRNKVELECRLCVRKKIVELM 64
            +  + + L SGG DS                 +S     R + ++  +     ++    
Sbjct: 139 SRPETCVALLSGGLDSLIGAIDMEADGLEKPVYVS----NRVRGDVAKQEKFASRLGAGN 194

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                +         A +     S +    A                 ++ L        
Sbjct: 195 RLLSLNADPRTSGATAEISQRPRSIVFIAFAALA---VTLLDRYNDGEVVDLHTPENGFI 251

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            L I            S      H     +   +   +E  + +        K     + 
Sbjct: 252 SLNIPL----TTLRRGSLSTRTTHPKFIEMLQGLFDSLELRIRLRNHHQLKTKG---TMM 304

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
                Q+L+  +  ES +C    R         C  C  C +R+  ++++
Sbjct: 305 LGSKNQELLIELASESMSCGRAGR-----IYTHCGRCLPCLVRRSSFLKW 349


>gi|162448041|ref|YP_001621173.1| thiamine biosynthesis protein ThiI [Acholeplasma laidlawii PG-8A]
 gi|189030612|sp|A9NHG7|THII_ACHLI RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|161986148|gb|ABX81797.1| thiamine biosynthesis ATP pyrophosphatase [Acholeplasma laidlawii
           PG-8A]
          Length = 412

 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 63/204 (30%), Gaps = 31/204 (15%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L++ SGG DS       + +   VE   F      +      L   +K++E+  K   
Sbjct: 177 KGLVMLSGGIDSPVAAHLMMKQGIDVELFHF------ESTPLTPLESVQKVIEIAKKLAY 230

Query: 70  SL----GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  + H++P   + +   S +                 +     +F       A +
Sbjct: 231 YTPYNKIKLHLVPFTKIHEAILSYVADP------------YIITIMRRMFYRLGEIYANQ 278

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G+  ++ G      +         I            + + +  P++   K +   +++
Sbjct: 279 HGLDTLINGESVGQVASQTLSSIKVIE---------NVTSIPILRPVITYDKNDIINISK 329

Query: 186 DIGGQDLVNLILEESHTCYLGKRD 209
            I   D+  L   +  + Y+ +  
Sbjct: 330 KIDTYDISILPFNDCCSIYVPRNP 353


>gi|111656750|ref|ZP_01407633.1| hypothetical protein SpneT_02001957 [Streptococcus pneumoniae
           TIGR4]
 gi|225855206|ref|YP_002736718.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae JJA]
 gi|225723556|gb|ACO19409.1| NADPH-dependent 7-cyano-7-deazaguanine reductase [Streptococcus
           pneumoniae JJA]
          Length = 177

 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 10/121 (8%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL++FSGGQDS+TCL W +  ++ VE ++F YGQR+ +E++    + K+           
Sbjct: 6   ALVVFSGGQDSTTCLFWVMQHYETVEAVTFAYGQRHHLEIQITREIAKEQG--------- 56

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
               HIL +++LG I+       + +    + L       +  +F        +   I  
Sbjct: 57  -IRHHILDMSLLGQITAQPDFATIHISYIPDKLCVESKSLKLYLFSYRNHGDFHENCINT 115

Query: 131 I 131
           I
Sbjct: 116 I 116


>gi|330836493|ref|YP_004411134.1| tRNA sulfurtransferase [Spirochaeta coccoides DSM 17374]
 gi|329748396|gb|AEC01752.1| tRNA sulfurtransferase [Spirochaeta coccoides DSM 17374]
          Length = 405

 Score = 77.6 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 54/190 (28%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +LL SGG DS         R   +E++ F                 +K+  L      
Sbjct: 180 KGMLLLSGGIDSPVAGYMMASRGLALESVYFH------AYPYTSDEALEKVKTLASLIAP 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                H+  +                + ++ ++             +  A  L+   G  
Sbjct: 234 YTHGMHLHVVPF----------TKAQLWMRQHSNVEEQTLMLRASMMKVAQALSLMRGAQ 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      +           ++   +         V  PL+ ++K     LA+ IG 
Sbjct: 284 ALVTGEALGQVASQTLESMSFTDSMTDML---------VLRPLVGMEKQAIIHLARTIGT 334

Query: 190 QDLVNLILEE 199
            +   L  E+
Sbjct: 335 YETSILPYED 344


>gi|328957156|ref|YP_004374542.1| tRNA sulfurtransferase [Carnobacterium sp. 17-4]
 gi|328673480|gb|AEB29526.1| tRNA sulfurtransferase [Carnobacterium sp. 17-4]
          Length = 405

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 57/192 (29%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +L+ SGG DS       + R   VE + F                 +K  +L  K 
Sbjct: 177 SGKGMLMLSGGIDSPVAGYLTMKRGVNVEAVHFH------SPPYTSPRALQKAKDLAAKL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    + +                +K          V  R ++ L        R G
Sbjct: 231 AAFSGSVQFIEVPF--------TEIQEEIKKIVPEGYLMTVTRRMMMRLT-DLIREERKG 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +         S          + + + I +   +   V  P++ + K E  ++AQ I
Sbjct: 282 LAIVNGESLGQVAS----------QTLHSMIAINDVTATPVIRPVVSMDKNEIIEIAQKI 331

Query: 188 GGQDLVNLILEE 199
              +L     E+
Sbjct: 332 DTFELSIQPFED 343


>gi|167971591|ref|ZP_02553868.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
           parvum serovar 6 str. ATCC 27818]
 gi|186700977|gb|EDU19259.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
           parvum serovar 6 str. ATCC 27818]
          Length = 390

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 60/195 (30%), Gaps = 22/195 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              AL+L SGG DS       + R   ++ ++F                  K + L  + 
Sbjct: 174 NGKALVLLSGGIDSPVASRLIMKRGISIDFITF------ITPPHTSQKALDKTIALAKQI 227

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    L   +     +      +  +I   +  +  +      F+  A  LA  + 
Sbjct: 228 --------TLDNKLTKANLYVCNFTKLQDEIAHISKESYRITLMRRYFMRIAKRLAISVK 279

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +        TI ++          +  V  PL+   K E   LA+  
Sbjct: 280 ANALVTGEALGQVASQTLNSMQTISSVLD--------NFLVLRPLIAYDKEEIISLAKRF 331

Query: 188 GGQDLVNLILEESHT 202
              +L  L  ++S +
Sbjct: 332 NTYELSILPYDDSCS 346


>gi|13357980|ref|NP_078254.1| thiamin biosynthesis protein [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168281575|ref|ZP_02689242.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
           parvum serovar 14 str. ATCC 33697]
 gi|170762337|ref|YP_001752502.1| thiamine biosynthesis protein ThiI [Ureaplasma parvum serovar 3
           str. ATCC 27815]
 gi|20140892|sp|Q9PQ71|THII_UREPA RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|189030670|sp|B1AJ58|THII_UREP2 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|11278781|pir||C82892 thiamin biosynthesis protein UU418 [imported] - Ureaplasma
           urealyticum
 gi|6899407|gb|AAF30829.1|AE002139_2 thiamin biosynthesis protein [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827914|gb|ACA33176.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
           parvum serovar 3 str. ATCC 27815]
 gi|182675968|gb|EDT87873.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
           parvum serovar 14 str. ATCC 33697]
          Length = 390

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 60/195 (30%), Gaps = 22/195 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              AL+L SGG DS       + R   ++ ++F                  K + L  + 
Sbjct: 174 NGKALVLLSGGIDSPVASRLIMKRGISIDFITF------ITPPHTSQKALDKTIALAKQI 227

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    L   +     +      +  +I   +  +  +      F+  A  LA  + 
Sbjct: 228 --------TLDNKLTKANLYVCNFTKLQDEIAHISKESYRITLMRRYFMRIAKRLAISVK 279

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +        TI ++          +  V  PL+   K E   LA+  
Sbjct: 280 ANALVTGEALGQVASQTLNSMQTISSVLD--------NFLVLRPLIAYDKEEIISLAKRF 331

Query: 188 GGQDLVNLILEESHT 202
              +L  L  ++S +
Sbjct: 332 NTYELSILPYDDSCS 346


>gi|315127675|ref|YP_004069678.1| hypothetical protein PSM_A2613 [Pseudoalteromonas sp. SM9913]
 gi|315016189|gb|ADT69527.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913]
          Length = 444

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 63/223 (28%), Gaps = 21/223 (9%)

Query: 11  ALLLFSGGQDSSTCLSWAL--DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           ++ LFSGG DS+      L  +   +   +S  Y    + +   +  +++ +     +  
Sbjct: 151 SVCLFSGGLDSAVGAIDILNGESDLKPLLVSHAY----RGDGAKQEDIKQLLSPPFGELS 206

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG- 127
            S+    I  L        + ++                   RN        T+      
Sbjct: 207 YSMSPHIIKHL-----EGKTDISMRGRSFNFLAMAVLGISALRNANCDSSIETIVVPENG 261

Query: 128 -ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I+           S      H    +   ++      HV    P  +  K E      D
Sbjct: 262 YISINPPLTRRRIGSHSTRTTHPNFLSRLESLLRDTGFHVKFVNPYQFKTKGEMLAECVD 321

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
              QD +   +  S +C        +     C  C  C +R+ 
Sbjct: 322 ---QDAIRKAVPLSVSC-----SHWHREHKQCGHCVPCLIRRA 356


>gi|147920111|ref|YP_686127.1| putative thiamine biosynthesis protein [uncultured methanogenic
           archaeon RC-I]
 gi|110621523|emb|CAJ36801.1| putative thiamine biosynthesis protein [uncultured methanogenic
           archaeon RC-I]
          Length = 393

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 50/184 (27%), Gaps = 23/184 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + + SGG DS       + R   +  + F        +          + EL      
Sbjct: 182 KMVAMVSGGIDSPVAAWLMMKRGCEIVPVFFH--NAPYFDDTTMNRALDTLRELSKWCPG 239

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                +++P                    Q+             +    A  +A + G  
Sbjct: 240 HGMTAYVMPHG------------PNLQAFQEKGNQKYTCVFCKHLMYKVARAIAEKEGAH 287

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          +     +         ++ PL+ + K E  +L++ IG 
Sbjct: 288 GIVTGSSIGQVAS---------QTSNNMLAEIYGVDFPINHPLIGMDKDEIVELSRRIGL 338

Query: 190 QDLV 193
            DL 
Sbjct: 339 FDLS 342


>gi|168307721|ref|ZP_02690396.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
           parvum serovar 1 str. ATCC 27813]
 gi|171902822|gb|EDT49111.1| thiamine biosynthesis/tRNA modification protein ThiI [Ureaplasma
           parvum serovar 1 str. ATCC 27813]
          Length = 390

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 60/195 (30%), Gaps = 22/195 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              AL+L SGG DS       + R   ++ ++F                  K + L  + 
Sbjct: 174 NGKALVLLSGGIDSPVASRLIMKRGISIDFITF------ITPPHTSQKALDKTIALAKQI 227

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    L   +     +      +  +I   +  +  +      F+  A  LA  + 
Sbjct: 228 --------TLDNKLTKANLYVCNFTKLQDEIAHISKESYRITLMRRYFMRIAKRLAISVK 279

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +        TI ++          +  V  PL+   K E   LA+  
Sbjct: 280 ANALVTGEALGQVASQTLNSMQTISSVLD--------NFLVLRPLIAYDKEEIISLAKRF 331

Query: 188 GGQDLVNLILEESHT 202
              +L  L  ++S +
Sbjct: 332 NTYELSILPYDDSCS 346


>gi|332158033|ref|YP_004423312.1| hypothetical protein PNA2_0391 [Pyrococcus sp. NA2]
 gi|331033496|gb|AEC51308.1| hypothetical protein PNA2_0391 [Pyrococcus sp. NA2]
          Length = 198

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 59/186 (31%), Gaps = 23/186 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L S G DS   +     R   V  L F       ++      + K++         
Sbjct: 2   RVVALLSSGIDSPVAIHLMASRGAEVYPLHFRQD---DIKENKAKRIVKRL--------- 49

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E H   +  L  +    +   V  K+++                + A   A  +   
Sbjct: 50  --QEIHGDKVRDLKIVDAFEVQGPVFEKLKEIGKVKWTCIFCKYTMYMVAERYAKEVNAE 107

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I+ G      +          + ++  + +   + + V  PL+ L K E  K+A++IG 
Sbjct: 108 AILTGDSLGQVAS---------QTLDNLLVISTATKLPVIRPLIGLDKEEIVKIAKEIGT 158

Query: 190 QDLVNL 195
            ++   
Sbjct: 159 FEISIE 164


>gi|300863447|ref|ZP_07108402.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300338510|emb|CBN53544.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 484

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 66/231 (28%), Gaps = 20/231 (8%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           + L+SGG D+   L   L  +     + F  G  +      +  V KK+  + P      
Sbjct: 157 VALWSGGLDALAGLYTRLQMYPEKSFVLFGTGS-SNTVYARQERVAKKVQSIFPGRCHLF 215

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
                   + +   +  S  + V                  ++           +G  N+
Sbjct: 216 RVPIRFHDSDVQQKNKCSRARGV-------VFTLLGAACAYLMEQRILCVYENGIGAINL 268

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
                             T+  +   ++  +     V  P ++  K    ++ + +    
Sbjct: 269 PYRASAVGLDHSRSVHPLTLLMVGDVVSELLGEEFCVQNPFLFWTKA---QMCKALAKDR 325

Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF----KEKY 238
             +L    + +C         +    C  C +C LR++         K +Y
Sbjct: 326 RHDLP-SLTMSC----DSPHRQRPVQCGYCSSCLLRRQALAAADIKDKTRY 371


>gi|219851835|ref|YP_002466267.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Methanosphaerula palustris E1-9c]
 gi|219546094|gb|ACL16544.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Methanosphaerula palustris E1-9c]
          Length = 361

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 58/184 (31%), Gaps = 24/184 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-RNKVELECRLCVRKKIVELMPKWKDS 70
           + LFSGG DS       + R  ++  +         +  +     V + + +  P     
Sbjct: 170 VALFSGGIDSPVASYMMMKRGCKIIPIYVALDSFLTEKHIARAEQVIECLRQYQPDIA-- 227

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
               H++    L       +    A+  +           R +  L      A  +G   
Sbjct: 228 ---LHVISDDYL-------IKAKEALVARKLEKYTCVFCKRRMYRLATK--FAEEVGAIG 275

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      +          + ++    L   + + ++ PL+ L K E   +A+ IG  
Sbjct: 276 IVTGESLGQVAS---------QTLDNMTVLTNATTMPIYRPLIGLDKTEIISIARKIGTF 326

Query: 191 DLVN 194
           +   
Sbjct: 327 EDSI 330


>gi|154249448|ref|YP_001410273.1| thiamine biosynthesis protein ThiI [Fervidobacterium nodosum
           Rt17-B1]
 gi|154153384|gb|ABS60616.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Fervidobacterium nodosum Rt17-B1]
          Length = 389

 Score = 77.3 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 68/196 (34%), Gaps = 26/196 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  ALLL SGG DS     +A+ R   ++TL+F                 +KI++L    
Sbjct: 174 SGRALLLLSGGIDSPVAGWYAMRRGLELQTLTF------LSPPMTTEKSVQKILDLGRVL 227

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              L           G          V M I++N      +  +    +  A  +A R+ 
Sbjct: 228 ARYLPN---------GLRMWIVPLTEVQMYIKENAPDEYSLILQRRSMMRIANMIARRVK 278

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +          + +     +   S + V  PL+   K ET   A++I
Sbjct: 279 AKAIITGENLGQVAS---------QTLTNMAAIEDASSLLVLRPLIGFDKIETTNKAKEI 329

Query: 188 GGQDLVNLILEESHTC 203
           G  ++      +  +C
Sbjct: 330 GTFEISIQPYID--SC 343


>gi|149002066|ref|ZP_01827020.1| hypothetical protein CGSSp14BS69_10156 [Streptococcus pneumoniae
           SP14-BS69]
 gi|149020842|ref|ZP_01835371.1| hypothetical protein CGSSp23BS72_02354 [Streptococcus pneumoniae
           SP23-BS72]
 gi|147759875|gb|EDK66865.1| hypothetical protein CGSSp14BS69_10156 [Streptococcus pneumoniae
           SP14-BS69]
 gi|147930483|gb|EDK81466.1| hypothetical protein CGSSp23BS72_02354 [Streptococcus pneumoniae
           SP23-BS72]
          Length = 177

 Score = 76.9 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 10/125 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL W +  ++ VE ++F YGQR+ +E++    + K+       
Sbjct: 2   KRQSALVVFSGGQDSTTCLFWDMQHYETVEAVTFAYGQRHHLEIQITREIAKEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL +++LG I+       + +    + L       +  +F        +  
Sbjct: 57  -----IRHHILDMSLLGQITAQPDFATIHISYIPDKLCVESKSLKLYLFSYRNHGDFHEN 111

Query: 127 GITNI 131
            I  I
Sbjct: 112 CINTI 116


>gi|167628257|ref|YP_001678756.1| hypothetical protein HM1_0126 [Heliobacterium modesticaldum Ice1]
 gi|167590997|gb|ABZ82745.1| conserved hypothetical protein [Heliobacterium modesticaldum Ice1]
          Length = 453

 Score = 76.5 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 63/220 (28%), Gaps = 11/220 (5%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           + LFSGG DS      +L+       +S      +  +   +   ++ I  L   + D  
Sbjct: 152 VSLFSGGMDSLIFAINSLEEKKTPLFIS------HAGDGYTKNYQKEIINTLSNNYADIS 205

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
                L ++    I   S  +N         +         +  +         L   N+
Sbjct: 206 FSQLNLWMSFNKHIVSQSCKENTTRSRSFLYISLALFALSGLPKVDILDVPENGLIAINV 265

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
                    S      H     +   I   +    ++  P     K E  +       ++
Sbjct: 266 P-LDDLRVGSHSTRTTHPYYFKLWNEILGIVNLGKSIRNPYWNKTKGEMARDCL---NKE 321

Query: 192 LVNLILEESHTCYLGKR-DKRYEWGYGCNSCPACYLRQKG 230
           L+  +L  S +C    +   R      C  C  C +R+  
Sbjct: 322 LLLDLLPISMSCSAPTKYRYRGSTHMHCGHCVPCIIRRAA 361


>gi|163791288|ref|ZP_02185702.1| thiazole biosynthesis protein ThiI [Carnobacterium sp. AT7]
 gi|159873429|gb|EDP67519.1| thiazole biosynthesis protein ThiI [Carnobacterium sp. AT7]
          Length = 405

 Score = 76.5 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 56/188 (29%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +L+ SGG DS       + R   +E + F                 +K  +L  K     
Sbjct: 181 MLMLSGGIDSPVAGYLTMKRGVDIEAVHFH------SPPYTSPRALQKAKDLAAKLAAFS 234

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G    + +                +K          V  R ++ L        R G+  I
Sbjct: 235 GSVQFIEVPF--------TEIQEEIKKIVPEGYLMTVTRRLMMRLTDR-IREERKGLAII 285

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
                    S          + + + I +   +   V  P++ + K E  ++AQ I   +
Sbjct: 286 NGESLGQVAS----------QTLHSMIAINDVTATPVIRPIISMDKNEIIEIAQKIDTFE 335

Query: 192 LVNLILEE 199
           L     E+
Sbjct: 336 LSIQPFED 343


>gi|212224155|ref|YP_002307391.1| hypothetical protein TON_1006 [Thermococcus onnurineus NA1]
 gi|212009112|gb|ACJ16494.1| ThiI-related protein [Thermococcus onnurineus NA1]
          Length = 196

 Score = 76.5 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 58/187 (31%), Gaps = 25/187 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+ L S G DS   +   L +   +  + F          +       K++EL      
Sbjct: 2   KAVALLSSGIDSPVAIYLMLRKGMEITPVHF----------KQSDKKESKVLELCEILSK 51

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
               +  + +              V  K+ +               L  A  + + +G  
Sbjct: 52  YGKLNEPVIVD------AYEEQAPVFSKLVEIGKAKWTCLFCKYTMLRKACRVGHEIGAK 105

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + ++  + +   S + +  PL+   K E  K+A++IG 
Sbjct: 106 AIVTGDSLGQVAS---------QTLDNLLIISQASDLPILRPLIGRDKEEIVKIAKEIGT 156

Query: 190 QDLVNLI 196
            ++    
Sbjct: 157 FEISIEP 163


>gi|163784158|ref|ZP_02179097.1| trans-regulatory protein ExsB [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880577|gb|EDP74142.1| trans-regulatory protein ExsB [Hydrogenivirga sp. 128-5-R1-1]
          Length = 166

 Score = 76.5 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/169 (23%), Positives = 65/169 (38%), Gaps = 21/169 (12%)

Query: 77  LPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
           + +  L  I  S+LT    ++  +   +  P T VP RN+ FL  AA+      I NI I
Sbjct: 2   VDIPHLKGIEGSALTDEKVDIPSEDYPDQPPITTVPMRNLNFLSIAASFCDVYEIENIGI 61

Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGME-----SHVTVHTPLMWLKKYETWKLAQDIG 188
           G+   D             A        +      + + V+TP + + K +  KL  ++G
Sbjct: 62  GIHSVDSPYPDCRAEFASSAEAVINASSVMVAKKKNRIKVYTPFLGMTKTDVLKLGLELG 121

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
                 +  E++++CY G           C  C  C  RQ+ +     K
Sbjct: 122 ------VPYEKTYSCYRGTIPP-------CGECATCRQRQEAFESVGVK 157


>gi|83591056|ref|YP_431065.1| ExsB [Moorella thermoacetica ATCC 39073]
 gi|83573970|gb|ABC20522.1| preQ(0) biosynthesis protein QueC [Moorella thermoacetica ATCC
           39073]
          Length = 192

 Score = 76.5 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 76/232 (32%), Gaps = 48/232 (20%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L+L SGG DS+  + +   +   V  L   YGQ               + E   +   +
Sbjct: 4   VLVLLSGGIDSAALVHYYRSKNTSVYGLHVQYGQP--------------VAEREAQAAKA 49

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           +   + + L I       +  +    +  +  L    +        +        LGI  
Sbjct: 50  IAAHYGIDLRI-------AHIQPPLARKGEEYLCRNAIFVLIACANLSPGINRVALGIH- 101

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
                     + Y DC    +  ++  ++      VTV  P +   K E ++     G  
Sbjct: 102 --------SGTIYYDCSQGFMADMQRLLDGYFSGAVTVEAPFLRWSKLEVYQYCTSHG-- 151

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK-----GWMEFKEK 237
               + ++ +++C     +        C  CP+CY R++     G+M  K  
Sbjct: 152 ----VPVDLTYSCERNNDEP-------CGQCPSCYDRRRLYEAGGFMSGKTN 192


>gi|308801591|ref|XP_003078109.1| Predicted 3'-5' exonuclease (ISS) [Ostreococcus tauri]
 gi|116056560|emb|CAL52849.1| Predicted 3'-5' exonuclease (ISS) [Ostreococcus tauri]
          Length = 1313

 Score = 76.5 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 22/204 (10%), Positives = 55/204 (26%), Gaps = 25/204 (12%)

Query: 1    MNDIIKKAPSAL-LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
            M + + +  + + +  SGG DS         +   V TL  DY  R +   E        
Sbjct: 852  MRESMHEFGNTIAVSLSGGVDSMVLAYILKHQGYDVVTLHIDYKNRPESTEEA------- 904

Query: 60   IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                          D +   ++   +     T +   +             +        
Sbjct: 905  --------------DFVDDWSVRHGMKFERCTVDAIRRGVTPREQYEIESRKIRYGFYKK 950

Query: 120  ATLAYRLGITNIVIGVCETDYSGYPD-CRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            +   +      +     +   +   +  R   + ++      G+   V +  P++   K 
Sbjct: 951  SGQKHGFPAVLLGHHHGDVQENIITNLMRGANLLSVNGMDKRGVVEGVRIWRPMLPHNKV 1010

Query: 179  ETWKLAQDIGGQDLVNLILEESHT 202
            +    A   G    ++     + +
Sbjct: 1011 DVLDFAHTYGVPYFLDS--TPTWS 1032


>gi|213419651|ref|ZP_03352717.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 159

 Score = 76.1 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 49/130 (37%), Positives = 78/130 (60%), Gaps = 13/130 (10%)

Query: 22  STCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAI 81
           +TCL+ A  ++D V  ++FDYGQR++ E++    +  K+               +L + +
Sbjct: 39  TTCLAQARHQYDEVHCVTFDYGQRHRAEIDVARALALKLGARA---------HKVLDVTL 89

Query: 82  LGDISHSSLTKN----VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCE 137
           L +++ SSLT++       +   + +PNTFVPGRNI+FL  AA  AY++    ++ GVCE
Sbjct: 90  LNELAVSSLTRDSIPVPDYEPNADGIPNTFVPGRNILFLTLAAIYAYQVKAEAVITGVCE 149

Query: 138 TDYSGYPDCR 147
           TD+SGYPDCR
Sbjct: 150 TDFSGYPDCR 159


>gi|221635827|ref|YP_002523703.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thermomicrobium roseum DSM 5159]
 gi|221157653|gb|ACM06771.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thermomicrobium roseum DSM 5159]
          Length = 407

 Score = 76.1 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 57/189 (30%), Gaps = 24/189 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   + L SGG DS       + R   V  + F            R    +K VEL    
Sbjct: 180 SGRVVALLSGGFDSPVAAYRLMKRGCFVTFVHFH------AYPYVRPISIEKAVELARHL 233

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                  + L +  +GD                    +  V     + L  A  +A+  G
Sbjct: 234 SRFQPPKNRLIVVPIGDAQRVIALAAEP---------SLRVVLYRRLMLRIATAIAHEEG 284

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +          + +E    +G  + + +  PL+   K E    A  I
Sbjct: 285 AGALVTGESLGQVAS---------QTLENMRAIGAVTDLPLLRPLVGNNKDEIIAEAVRI 335

Query: 188 GGQDLVNLI 196
           G + +  + 
Sbjct: 336 GTEPISRVP 344


>gi|14591544|ref|NP_143626.1| hypothetical protein PH1786 [Pyrococcus horikoshii OT3]
 gi|3258222|dbj|BAA30905.1| 201aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 201

 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 64/195 (32%), Gaps = 28/195 (14%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M ++       + L S G DS   +     R   V  L F      + +       RK +
Sbjct: 1   MEEM-----RVIGLLSSGIDSPVAIHLMASRGAEVYPLHF------RQDEIKEKKARKLV 49

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             L     + + +  ++    +           V  K+++                + A 
Sbjct: 50  SRLKEIHGEKVKDLKVVDALKVQG--------PVFEKLRELKREKWICIFCKYTMYMVAE 101

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
             A  +G   IV G      +          + ++  + +   +++ +  PL+ L K E 
Sbjct: 102 KYAREVGAEAIVTGDSLGQVAS---------QTLDNLMVISTATNLPIIRPLIALDKEEI 152

Query: 181 WKLAQDIGGQDLVNL 195
            ++A++IG  ++   
Sbjct: 153 VRIAKEIGTFEISIE 167


>gi|296269306|ref|YP_003651938.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermobispora
           bispora DSM 43833]
 gi|296092093|gb|ADG88045.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermobispora
           bispora DSM 43833]
          Length = 398

 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 55/192 (28%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  AL L SGG DS       + R  RV+ L F                  K   L+   
Sbjct: 186 SGRALALLSGGIDSPVAAYRMMRRGLRVDFLHF------SGIPYTTSESIYKAYALVRTL 239

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +                     I+ +      V  +  + L  AA +A R+ 
Sbjct: 240 DKFQGRSRL----------WVVPFGKAQQSIKASGQDRLAVIAQRRLMLKTAAEVARRIH 289

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      S                        + +  PL+ + K E    A+ I
Sbjct: 290 AEALITGDSLGQVSSQTLANITAQD---------NAVELPILRPLIGMDKAEIIAEARRI 340

Query: 188 GGQDLVNLILEE 199
           G  ++  L  E+
Sbjct: 341 GTLEISELPDED 352


>gi|148990489|ref|ZP_01821630.1| hypothetical protein CGSSp6BS73_12431 [Streptococcus pneumoniae
           SP6-BS73]
 gi|147924247|gb|EDK75343.1| hypothetical protein CGSSp6BS73_12431 [Streptococcus pneumoniae
           SP6-BS73]
 gi|301794749|emb|CBW37202.1| conserved hypothetical protein [Streptococcus pneumoniae INV104]
          Length = 177

 Score = 76.1 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 10/125 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL W +  ++ VE ++F YGQ + +E++    + K+       
Sbjct: 2   KHQSALVVFSGGQDSTTCLFWTMQHYETVEAVTFAYGQHHHLEIQITREIAKEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL +++LG I+       + +    + L       +  +F        +  
Sbjct: 57  -----IRHHILDMSLLGQITAQPDFATIHISYIPDKLCVESKSLKLYLFSYRNHGDFHEN 111

Query: 127 GITNI 131
            I  I
Sbjct: 112 CINTI 116


>gi|257126603|ref|YP_003164717.1| thiamine biosynthesis/tRNA modification protein ThiI [Leptotrichia
           buccalis C-1013-b]
 gi|257050542|gb|ACV39726.1| thiamine biosynthesis/tRNA modification protein ThiI [Leptotrichia
           buccalis C-1013-b]
          Length = 396

 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 62/194 (31%), Gaps = 26/194 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+L SGG DS         R  R+  ++F                 +K+ EL      
Sbjct: 185 KGLVLLSGGIDSPVASFMMAKRGMRLNFVTFH------SFPFTSHQALEKVKELTDILSL 238

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G+  +  L IL            A+ IQ      T +  R ++ L    +   +    
Sbjct: 239 YVGKTRLYSLNILK--------IQEAINIQTKKDLATILTRRAMMRLAERLSGVMQYQA- 289

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++ G      +           A    +         V  PL+ + K E  ++A++I  
Sbjct: 290 -LITGESLGQVASQTMGGLTCTNASVEKL--------PVFRPLIGMDKTEIIEIAKEIET 340

Query: 190 QDLVNLILEESHTC 203
            +      E+  +C
Sbjct: 341 YEKSIEPYED--SC 352


>gi|297562063|ref|YP_003681037.1| thiamine biosynthesis/tRNA modification protein ThiI [Nocardiopsis
           dassonvillei subsp. dassonvillei DSM 43111]
 gi|296846511|gb|ADH68531.1| thiamine biosynthesis/tRNA modification protein ThiI [Nocardiopsis
           dassonvillei subsp. dassonvillei DSM 43111]
          Length = 429

 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 57/193 (29%), Gaps = 25/193 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +   L+L SGG DS       + R  +V+ L F                  K   L+ +
Sbjct: 196 MSGRGLVLMSGGIDSPVAAHRMIRRGLKVDFLHF------SGMPFTGPESIYKAYSLVRQ 249

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                    +  +                 +++ + +    +  +  + L  A  LA  L
Sbjct: 250 LDRYQVGSRLFVIPFGKA----------QQQLKSSGIERLQIVAQRRLMLKTAEALADDL 299

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   +V G      S                  L     + +  PL+ + K E    A+ 
Sbjct: 300 GAECLVTGDALGQVSSQTMT---------NLTALDDAVDLPILRPLIGMDKTEIMDHARR 350

Query: 187 IGGQDLVNLILEE 199
           IG   +  L  E+
Sbjct: 351 IGTLSISELPDED 363


>gi|15903645|ref|NP_359195.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae R6]
 gi|15459271|gb|AAL00406.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
          Length = 190

 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 10/125 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS+TCL W +  ++ VE ++F YGQ + +E++    + K+       
Sbjct: 15  KHQSALVVFSGGQDSTTCLFWTMQHYETVEAVTFAYGQHHHLEIQITREIAKEQG----- 69

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL +++LG I+       + +    + L       +  +F        +  
Sbjct: 70  -----IRHHILDMSLLGQITAQPDFATIHISYIPDKLCVESKSLKLYLFSYRNHGDFHEN 124

Query: 127 GITNI 131
            I  I
Sbjct: 125 CINTI 129


>gi|332993223|gb|AEF03278.1| hypothetical protein ambt_08760 [Alteromonas sp. SN2]
          Length = 443

 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 61/220 (27%), Gaps = 17/220 (7%)

Query: 11  ALLLFSGGQDSSTCLSWAL--DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           ++ LFSGG DS+      L      +   LS  Y      +   +  ++    EL     
Sbjct: 151 SVCLFSGGLDSAVGAIDTLNGKSKYKPLLLSHAYRGDGVKQENIKKLLKSHYGELSYSIS 210

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            SL       ++ L   +  ++       +    L  + +   N    +    +     I
Sbjct: 211 PSL-------ISRLKGKTDVTMRGRSFNFLAMAVLGISALRNANNDSSISTIIVPENGYI 263

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
           +           S      H    +    +       V    P  +  K E      D  
Sbjct: 264 SINPPLTRRRIGSHSTRTTHPYFLSRLEELLKDAGFRVKFVNPYQFKTKGEMLAKCVD-- 321

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQ 228
            Q  +   +  S +C        +     C  C  C +R+
Sbjct: 322 -QAAIVKAVPLSVSC-----SHWHRKHMQCGHCVPCLIRR 355


>gi|114798657|ref|YP_761231.1| hypothetical protein HNE_2538 [Hyphomonas neptunium ATCC 15444]
 gi|114738831|gb|ABI76956.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
          Length = 188

 Score = 75.7 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 64/216 (29%), Gaps = 43/216 (19%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++L SGG DS+ C +   +       +  DYG    +E        +K+   +       
Sbjct: 10  VVLVSGGIDSAACAAMYANNGGSTTGVFVDYGHPAAIEEFAS---AEKVCAALG------ 60

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
                  + +L     +         +  N L        +              GI   
Sbjct: 61  -------IPLLKTSFSTDRITGPGEIVGRNALLIWSAVFAS--------------GIKKG 99

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           VI +     + Y DC    I  ++  +       V +  P +   K E +   Q      
Sbjct: 100 VIAIGVHAGTTYYDCSSTFITRMDNMLAESTNGLVRISAPFVNASKSEVFSYLQR----- 154

Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLR 227
              +    +++C  G ++        C  C +C  R
Sbjct: 155 -SKVEASLTYSCESGSKEP-------CGICASCQDR 182


>gi|147920753|ref|YP_685441.1| putative thiamine biosynthesis ATP pyrophosphatase [uncultured
           methanogenic archaeon RC-I]
 gi|56295614|emb|CAH04855.1| thiamine biosynthesis protein (ATP pyrophosphatase [uncultured
           archaeon]
 gi|110620837|emb|CAJ36115.1| putative thiamine biosynthesis ATP pyrophosphatase [uncultured
           methanogenic archaeon RC-I]
          Length = 391

 Score = 75.3 bits (183), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 52/185 (28%), Gaps = 23/185 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L SGG DS       + R   +  L  D               + K ++++ K  +
Sbjct: 182 KMVALISGGIDSPVAAWLMMKRGCEIIPLYMD------NTPYLGEDAKAKTIDIVRKLHE 235

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                            + +       +                +    A  +A + G  
Sbjct: 236 WA--------PGREMKMYIAPHGQPLREFLQKGNKKYTCVFCKHLMYKVARAIAEKEGAH 287

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I+ G      +          +  E  +    +    ++ PL+ L K E   +A+ IG 
Sbjct: 288 GIITGSSLGQVAS---------QTSENMMAEAYDVDFPIYHPLIGLDKEEIMTIAKKIGT 338

Query: 190 QDLVN 194
            D+  
Sbjct: 339 YDISI 343


>gi|149189394|ref|ZP_01867679.1| hypothetical protein VSAK1_26050 [Vibrio shilonii AK1]
 gi|148836752|gb|EDL53704.1| hypothetical protein VSAK1_26050 [Vibrio shilonii AK1]
          Length = 372

 Score = 75.3 bits (183), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/237 (12%), Positives = 67/237 (28%), Gaps = 18/237 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+ L SGG DS       L+       +   Y +      + ++    K       +K 
Sbjct: 47  KAVSLLSGGLDSFIGAIDLLNSDIDTLFVGH-YAKDGTQHYQNQVEQALK-GHYPDYFKG 104

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +    I   ++    +    ++N         L        ++  L             
Sbjct: 105 YVKGCLIFDKSVFKGGNQEIDSENSQRSRSFMFLSMAAYLASSMGELCKLIVPENGFIAL 164

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
           N+ +       +      H    +    I   +  ++ +  P   + K E     +    
Sbjct: 165 NVPLDP-LRIGANSTKTVHPNFMSKMGEIFDFLGLNIGLINPYRHMTKGEMMANCK---N 220

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNS------------CPACYLRQKGWMEF 234
           + L+     E+ +C    + +  + G+  N             C  C +R+  + + 
Sbjct: 221 KSLLTKHAHETLSCASQSKMRWDQGGFKANRLGGSGGNGNCGYCYPCLIRKASFQKA 277


>gi|88811810|ref|ZP_01127063.1| hypothetical protein NB231_05456 [Nitrococcus mobilis Nb-231]
 gi|88790694|gb|EAR21808.1| hypothetical protein NB231_05456 [Nitrococcus mobilis Nb-231]
          Length = 441

 Score = 75.3 bits (183), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 65/208 (31%), Gaps = 30/208 (14%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVELMPKW 67
           S L L SGG DS         R  RV  L           L       + K++     + 
Sbjct: 206 SVLSLLSGGIDSPVAAFLMAKRGCRVNFLHMTATHLAADRLRENLVSRIAKRLSIYTLRS 265

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +  L       LA++G                  +     +  R I  L        R G
Sbjct: 266 RLFLVPYTHFDLALIGQPP---------------SGFEMILFRRFIARLGTRLV--ERHG 308

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V+G      +          + +E  ++    + + +  PL+ + K E  + A+ I
Sbjct: 309 GQALVVGDSLGQVAS---------QTLENIVSHSQATALPILRPLIGMDKQEIVERARTI 359

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWG 215
           G  +L     ++   C L  R  R +  
Sbjct: 360 GTYELSTEPYKD--CCALLSRHPRTKSH 385


>gi|262195764|ref|YP_003266973.1| thiamine biosynthesis/tRNA modification protein ThiI [Haliangium
           ochraceum DSM 14365]
 gi|262079111|gb|ACY15080.1| thiamine biosynthesis/tRNA modification protein ThiI [Haliangium
           ochraceum DSM 14365]
          Length = 401

 Score = 75.3 bits (183), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 63/187 (33%), Gaps = 23/187 (12%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           LL SGG DS      A+ R  RV  + F                +KK++ L  +     G
Sbjct: 191 LLLSGGIDSPVAGWSAMRRGCRVVAVYFH------SFPYTGDKTKKKVLTLAQRLAAWQG 244

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
              +  +               A++       +  V     + L  A+ LA R  ++ +V
Sbjct: 245 SVPVHVVHF--------TEVQKALREHAGGRADLGVLMYRRMMLRAASRLALRDELSALV 296

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
            G      +          + +E    +   + V V  PL+   K E  + AQ IG  ++
Sbjct: 297 TGDSIGQVAS---------QTVENLGVVEDAASVPVLRPLLTFDKAEIVERAQQIGTYEV 347

Query: 193 VNLILEE 199
                E+
Sbjct: 348 SIQPYED 354


>gi|269215627|ref|ZP_06159481.1| thiamine biosynthesis/tRNA modification protein ThiI [Slackia
           exigua ATCC 700122]
 gi|269131114|gb|EEZ62189.1| thiamine biosynthesis/tRNA modification protein ThiI [Slackia
           exigua ATCC 700122]
          Length = 421

 Score = 75.3 bits (183), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 53/190 (27%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L S G DS   L     R      + F          + +      + ++    + 
Sbjct: 184 KVVCLLSSGIDSPVALWRMARRGATCVAVHF------SGRPQTQATSEFIVDDIAHTIEG 237

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G   +  +             +    I         +     + +  AA +A R G  
Sbjct: 238 FGGIARMYVVPF----------GDYQRTIAGTVPQRLRIIVYRRLMMRVAAAIARREGAK 287

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      +          + ++     G    + V  PL+   K E    AQ +G 
Sbjct: 288 ALVTGESLGQVAS---------QTLDNLAATGSAVDMQVFRPLIGSDKLEIIADAQKLGT 338

Query: 190 QDLVNLILEE 199
            DL +    +
Sbjct: 339 FDLSSTPAPD 348


>gi|148642677|ref|YP_001273190.1| thiamine biosynthesis ATP pyrophosphatase, ThiI [Methanobrevibacter
           smithii ATCC 35061]
 gi|222445826|ref|ZP_03608341.1| hypothetical protein METSMIALI_01470 [Methanobrevibacter smithii
           DSM 2375]
 gi|229558682|sp|A5UKU4|THII_METS3 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|148551694|gb|ABQ86822.1| thiamine biosynthesis ATP pyrophosphatase, ThiI [Methanobrevibacter
           smithii ATCC 35061]
 gi|222435391|gb|EEE42556.1| hypothetical protein METSMIALI_01470 [Methanobrevibacter smithii
           DSM 2375]
          Length = 381

 Score = 75.3 bits (183), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 56/187 (29%), Gaps = 23/187 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L S G DS       + R   V  L  D                 KI++ +  +  
Sbjct: 177 KVVVLVSSGIDSPVAAYLMMKRGCEVIALHCD---NAPFTGPKVHENFDKIIDQLQSYAK 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +     +                   + +D                  A  LA++ G +
Sbjct: 234 GVPITKKVV-----------KYGEYLQQAKDCAPEKMTCVLCKSGMYKIAEKLAHKYGAS 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + +   +       + + +PL+ L K E  ++A+DIG 
Sbjct: 283 AIVDGSSVGQVAS---------QTLSNILATRHGVDMPILSPLIGLDKLEITRIAEDIGT 333

Query: 190 QDLVNLI 196
            ++  L 
Sbjct: 334 FEISKLD 340


>gi|260890636|ref|ZP_05901899.1| thiamine biosynthesis/tRNA modification protein ThiI [Leptotrichia
           hofstadii F0254]
 gi|260859681|gb|EEX74181.1| thiamine biosynthesis/tRNA modification protein ThiI [Leptotrichia
           hofstadii F0254]
          Length = 396

 Score = 75.3 bits (183), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 61/194 (31%), Gaps = 26/194 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+L SGG DS         R  R+  ++F                 +K+ EL      
Sbjct: 185 KGLVLLSGGIDSPVASFMMAKRGMRLNFITFH------SFPFTSQQALEKVKELTDILSL 238

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G+  +  L IL            A+  Q      T +  R ++ L    +   +    
Sbjct: 239 YVGKTRLYSLNILK--------IQEAINTQTKKDLATILTRRAMMRLAERLSNTMQYQA- 289

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++ G      +           A    +         V  PL+ + K E  ++A++I  
Sbjct: 290 -LITGESLGQVASQTMGGLTCTNASVEKL--------PVFRPLIGMDKTEIIEIAKEIET 340

Query: 190 QDLVNLILEESHTC 203
            +      E+  +C
Sbjct: 341 YEKSIEPYED--SC 352


>gi|320100773|ref|YP_004176365.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Desulfurococcus mucosus DSM 2162]
 gi|319753125|gb|ADV64883.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Desulfurococcus mucosus DSM 2162]
          Length = 484

 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 56/189 (29%), Gaps = 23/189 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL+LFSGG DS         R   V+ L +  G  +         V KK+ +       
Sbjct: 174 RALVLFSGGFDSPVAAWLMAKRGLEVDFLHYMMG--SSEVSRQAFAVAKKLAD--EWLSS 229

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                  +    L              +I+     +        +  + A  +A RLG  
Sbjct: 230 YDPRFITIDFTPL------------IAEIEGKIEWSYRQVVLRALMYMVAGRVAERLGYD 277

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      S           A   A          V  PL+   K E    ++ IG 
Sbjct: 278 ALVTGEALGQASSQTL-------ANLRAAEYAASPGCIVLRPLIGFDKEEIVGYSRRIGL 330

Query: 190 QDLVNLILE 198
            +  + + E
Sbjct: 331 YEYSSRVAE 339


>gi|52549241|gb|AAU83090.1| thiamine biosynthesis ATP pyrophosphatase [uncultured archaeon
           GZfos26E7]
          Length = 381

 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 53/181 (29%), Gaps = 24/181 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L SGG DS       + R   V  L FD     +        + ++ +  + +W  
Sbjct: 173 KMIALVSGGIDSPVAAWMLMRRGAEVIPLYFD---LEEFTDPKSRELAEQSINSLFEWSY 229

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           S    + +P               V  +I     P         +      ++A +    
Sbjct: 230 SDMTAYRVPYG------------AVLREIASRCEPRITCVICKRMMYRIGTSIAEKENAC 277

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          +  +  +       + ++ PL+ + K E    A  IG 
Sbjct: 278 GIVTGSSLGQVAS---------QTSQNMLAEMHGLGMPIYHPLIGMDKREIIDRATRIGT 328

Query: 190 Q 190
            
Sbjct: 329 F 329


>gi|257056677|ref|YP_003134509.1| thiamine biosynthesis protein ThiI [Saccharomonospora viridis DSM
           43017]
 gi|256586549|gb|ACU97682.1| thiazole biosynthesis/tRNA modification protein ThiI
           [Saccharomonospora viridis DSM 43017]
          Length = 393

 Score = 75.3 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 66/194 (34%), Gaps = 29/194 (14%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  AL+L SGG DS      A+ R  R + + F                  K   L+ + 
Sbjct: 180 SGRALVLLSGGYDSPVAAYRAMRRGLRCDFVHF------TGAPLTGPSSTYKAYALVREL 233

Query: 68  KDSLGE--DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
               G+   H++P+        ++   ++ +  Q              + +  A  LA  
Sbjct: 234 DRFQGDSRLHVIPIGNAQRSLATAGAGDLQIIAQ------------RRLMVRTAEALARE 281

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           LG   +V+G      S          + +     +   + + +  PL+   K E    A+
Sbjct: 282 LGAQALVVGDSLGQVSS---------QTLANMATVEQATSLPLLRPLVAWDKDEIIAEAR 332

Query: 186 DIGGQDLVNLILEE 199
            IG  ++  L  E+
Sbjct: 333 RIGTAEISKLPDED 346


>gi|168483299|ref|ZP_02708251.1| NADPH-dependent 7-cyano-7-deazaguanine reductase (nadph-dependent
           nitrile oxidoreductase) [Streptococcus pneumoniae
           CDC1873-00]
 gi|221232515|ref|YP_002511668.1| hypothetical protein SPN23F_17880 [Streptococcus pneumoniae ATCC
           700669]
 gi|172043242|gb|EDT51288.1| NADPH-dependent 7-cyano-7-deazaguanine reductase (nadph-dependent
           nitrile oxidoreductase) [Streptococcus pneumoniae
           CDC1873-00]
 gi|220674976|emb|CAR69553.1| conserved hypothetical protein [Streptococcus pneumoniae ATCC
           700669]
          Length = 177

 Score = 75.0 bits (182), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 10/125 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  SAL++FSGGQDS TCL W +  ++ VE ++F YGQR+ +E++    + K+       
Sbjct: 2   KRQSALVVFSGGQDSKTCLFWTMQHYETVEAVTFAYGQRHHLEIQITREIAKEQG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL +++LG I+       + +    + L       +  +F        +  
Sbjct: 57  -----IRHHILDMSLLGQITAQPDFATIHISYIPDKLCVESKSLKLYLFSYRNHGDFHEN 111

Query: 127 GITNI 131
            I  I
Sbjct: 112 CINTI 116


>gi|306819900|ref|ZP_07453553.1| thiamine biosynthesis/tRNA modification protein ThiI [Eubacterium
           yurii subsp. margaretiae ATCC 43715]
 gi|304552057|gb|EFM39995.1| thiamine biosynthesis/tRNA modification protein ThiI [Eubacterium
           yurii subsp. margaretiae ATCC 43715]
          Length = 392

 Score = 74.6 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 59/183 (32%), Gaps = 24/183 (13%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +L SGG DS         R   +E + F                ++K+++L+       G
Sbjct: 183 VLISGGIDSPVATYLMARRGLFIEAVHFH------SYPFTNERSKQKVIDLVTHLTSYCG 236

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
              +  + +L          ++  +I +               +  A  +A     T+++
Sbjct: 237 RIRLHLVNLL----------DIQKEINEKCPGEYMTILSRRFMMRIAQEIANDYECTSLI 286

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
            G      +                    + + + V  PL+ ++K +  ++A+ IG  D 
Sbjct: 287 TGESLGQVASQTSLGLLATD--------NVVNTMPVFRPLIAMEKTQIIEIAKKIGTYDT 338

Query: 193 VNL 195
             +
Sbjct: 339 SII 341


>gi|289449929|ref|YP_003475447.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
 gi|289184476|gb|ADC90901.1| thiamine biosynthesis/tRNA modification protein ThiI [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
          Length = 391

 Score = 74.6 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 55/181 (30%), Gaps = 25/181 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS         R   +E + F                ++K+++L     D  G   +  
Sbjct: 191 IDSPVAGYMMASRGMELEAIYFH------TYPYTSDRAKQKVIDLAEILTDYCGRLKLHI 244

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
           +             ++ + I+DN   +        I +  A  +A +     ++ G    
Sbjct: 245 VDF----------TDIQLAIRDNAPQDMMTIVMRRIMMRIAEQVAVKNQARCLITGESLG 294

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
             +        T   +           + +  PL+   K +T  +++ IG  D   L  E
Sbjct: 295 QVASQTLEALCTTDVVVN---------MPIFRPLIGTDKDDTVNISKRIGAFDTSILPYE 345

Query: 199 E 199
           +
Sbjct: 346 D 346


>gi|254411984|ref|ZP_05025759.1| hypothetical protein MC7420_5373 [Microcoleus chthonoplastes PCC
           7420]
 gi|196180950|gb|EDX75939.1| hypothetical protein MC7420_5373 [Microcoleus chthonoplastes PCC
           7420]
          Length = 478

 Score = 74.6 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 68/231 (29%), Gaps = 18/231 (7%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           + L+SGG D+   L   L        + F  G  N V              L P ++D L
Sbjct: 157 VALWSGGLDALAGLYSRLQTNHAASFMLFGTGSNNNVY----ARQEHVFKALQPSFRDRL 212

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
                +P+       H       A  I    L   +        L         +G  N+
Sbjct: 213 -NLCRVPIRFSDSSRHQKNKIPRARGIVFTLLGAAYAYLMGQRVLYVYEN---GIGAINL 268

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
                             T+  +   ++        V  P ++  K E   + + +    
Sbjct: 269 PYRASAVGLDHSRSVHPLTLLMVSDVVSELFGEEFRVRNPFLFWTKAE---MCRALAEDG 325

Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW----MEFKEKY 238
             +L    + +C    R  +      C  C +C LR++      +E + +Y
Sbjct: 326 RSDLP-PLTKSCDSPHRQPQ--QPIQCGYCSSCILRKQALAASKIEDRTRY 373


>gi|20094344|ref|NP_614191.1| ATP pyrophosphatase involved in thiamine biosynthesis [Methanopyrus
           kandleri AV19]
 gi|19887403|gb|AAM02121.1| ATP pyrophosphatase involved in thiamine biosynthesis [Methanopyrus
           kandleri AV19]
          Length = 374

 Score = 74.6 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 59/189 (31%), Gaps = 24/189 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L SGG DS     +A  R   V  L  D G +   E++    +  K  E +P   +
Sbjct: 167 RVVCLVSGGIDSPVAAWYAARRGCEVIWLHLDRG-KYGSEVDAVERLAGKFSEWLPSDVE 225

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            L ED    +  L  +              +               +  A  +   +G  
Sbjct: 226 LLIEDFEDFMESLEGL--------------EGESARYRCVLCKREMIRRACDVCENVGAV 271

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V+G      +          +  +    +   +   V  PL+   K E  +L++ +G 
Sbjct: 272 AVVMGDVIGQVAS---------QIPDNLAVIDRVARFPVFRPLLGFDKNEVQRLSERLGL 322

Query: 190 QDLVNLILE 198
            ++      
Sbjct: 323 FEVSKEHRP 331


>gi|269123587|ref|YP_003306164.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Streptobacillus moniliformis DSM 12112]
 gi|268314913|gb|ACZ01287.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Streptobacillus moniliformis DSM 12112]
          Length = 394

 Score = 74.6 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 59/192 (30%), Gaps = 26/192 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           L L SGG DS         R  +++ +++                  KI EL+    +  
Sbjct: 185 LSLISGGIDSPVASFLMSKRGLKLDFVTYH------SFPFTSEKALVKIEELVKILSEYN 238

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G+     + IL           +   I +             + +  +  LA +  +  +
Sbjct: 239 GKSKFYSMNIL----------PIQQAINEKTNKEYATILTRRVMMRLSEMLAKKNNLRAL 288

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V G      +       +   A    +         V  PL+ + K E  + A +IG  +
Sbjct: 289 VTGESLGQVASQTLEGLNCTAASVKDL--------VVFRPLISIDKLEIIEKANEIGTYE 340

Query: 192 LVNLILEESHTC 203
                 ++  +C
Sbjct: 341 KSIEPHDD--SC 350


>gi|294660494|ref|NP_853282.2| thiamine biosynthesis protein ThiI [Mycoplasma gallisepticum str.
           R(low)]
 gi|284812155|gb|AAP56850.2| Thiamine biosynthesis protein ThiI [Mycoplasma gallisepticum str.
           R(low)]
 gi|284930768|gb|ADC30707.1| Thiamine biosynthesis protein ThiI [Mycoplasma gallisepticum str.
           R(high)]
 gi|284931327|gb|ADC31265.1| Thiamine biosynthesis protein ThiI [Mycoplasma gallisepticum str.
           F]
          Length = 396

 Score = 74.2 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 53/209 (25%), Gaps = 22/209 (10%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +K +   L+L SGG DS         R   V+ L+F                  K V L 
Sbjct: 171 VKSSGKVLVLLSGGIDSPVASDLLYKRGMHVDFLTF------ITPPHTSKQALDKTVLLA 224

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                         ++      H+       +           +  R    +       Y
Sbjct: 225 QTVSKHN------EVSDAKIFIHNFTNVLKEISHTKYENYRITLMRRCFYKIANKLINQY 278

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                 I  G      +         I      +         V  PL+   K +  + A
Sbjct: 279 GYDC--IATGESLGQVASQTINSMKAISNASKDL--------LVLRPLLCYDKSQIIEHA 328

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYE 213
           + I   ++  L   ++ + Y  K+     
Sbjct: 329 KKIKTYEISILPYSDACSLYAPKKPITNP 357


>gi|292655800|ref|YP_003535697.1| thiamine biosynthesis/tRNA modification protein ThiI [Haloferax
           volcanii DS2]
 gi|291370657|gb|ADE02884.1| thiamine biosynthesis/tRNA modification protein ThiI [Haloferax
           volcanii DS2]
          Length = 391

 Score = 74.2 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 60/187 (32%), Gaps = 24/187 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+ L SGG DS       + R   +  +  D G       + R    + +  +  +  +
Sbjct: 182 RAVSLVSGGIDSPVATWELMRRGCEIVPVYVDLGD--YGGADHRARAIETVRTIARRAPN 239

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +    H++P              +V  ++ ++      +  R  + L  AA +A      
Sbjct: 240 ADMRVHVVP------------AGDVVERLMESVDDTRMLSLRRAM-LAIAAEVATDEHAH 286

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
           +IV G      S           A              VH PL+   K +    A+D+G 
Sbjct: 287 SIVTGESLGQKSSQTGENLAVTEAA---------VDYPVHRPLLTRDKTDIVAAARDLGT 337

Query: 190 QDLVNLI 196
            D   L 
Sbjct: 338 YDDSTLP 344


>gi|242398342|ref|YP_002993766.1| Probable thiamine biosynthesis protein thiI [Thermococcus sibiricus
           MM 739]
 gi|242264735|gb|ACS89417.1| Probable thiamine biosynthesis protein thiI [Thermococcus sibiricus
           MM 739]
          Length = 382

 Score = 74.2 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 61/187 (32%), Gaps = 24/187 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L SG  DSS      + R   V  +    G++        L   +KI   + K+  
Sbjct: 182 KVMALLSGSIDSSVAAFLMMKRGCEVIPVHIYVGEKT-------LEKVRKIWNQLKKYHY 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
               D I+              + +   ++     N        + +  A  +A   G  
Sbjct: 235 GGKSDLIVIKPQ--------EREKIIQTLKQLKKENYTCVFCKYMMIKKADEIAREFGAK 286

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV+G      +          + +E    +   S + ++ PL+ + K E   +A+ I  
Sbjct: 287 GIVMGDSLGQVAS---------QTLENMYIVSQASDLPIYRPLVGMDKEEIVAIAKTIRT 337

Query: 190 QDLVNLI 196
            +L  L 
Sbjct: 338 FELSTLP 344


>gi|296272287|ref|YP_003654918.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Arcobacter nitrofigilis DSM 7299]
 gi|296096462|gb|ADG92412.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Arcobacter nitrofigilis DSM 7299]
          Length = 346

 Score = 74.2 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 49/184 (26%), Gaps = 10/184 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + +    ++  SGG DSS            VE +      R     E  L   + +   +
Sbjct: 1   MSEIKKVMVGMSGGIDSSVTAYMLQKEGYEVEGVYLKLHNRTDGYHEKNLEYIEDVAAFL 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                   + HIL LA            +      +   PN  V     I        A 
Sbjct: 61  ------GIKYHILDLADKFTAEVYDYFVDS---YLEGTTPNPCVKCNKQIKFGAMLDFAK 111

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE-TWKL 183
             G + +  G        +     D  +     ++   +  +      +   K E   K 
Sbjct: 112 EHGASYLATGHYAKTDGEFFYEADDKTKDQSYFLSQVPKEALPFMMFPLSTYKKEDIVKF 171

Query: 184 AQDI 187
             ++
Sbjct: 172 GAEL 175


>gi|327401325|ref|YP_004342164.1| Thiamine biosynthesis protein [Archaeoglobus veneficus SNP6]
 gi|327316833|gb|AEA47449.1| Thiamine biosynthesis protein [Archaeoglobus veneficus SNP6]
          Length = 196

 Score = 74.2 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 52/189 (27%), Gaps = 32/189 (16%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                L L SGG DS+      L R   VE L F  G      +   + +  K+ E    
Sbjct: 1   MQMKILALLSGGIDSAVACYIMLRRGCSVEYLHFSMG---SASVNKAIRLASKLKEYGGS 57

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +  +     L   +                                  L  A  LA ++
Sbjct: 58  GRIFVIPHSRLIELV--------------------PKDRYTCVYCKRGMLSIAEMLAEKI 97

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   ++ G      +           A            + V  PL+   K E   +A++
Sbjct: 98  GCAALLTGDSLGQVASQTIPNLRAEDAA---------VRIPVLRPLIGFDKDEIIGIAKE 148

Query: 187 IGGQDLVNL 195
           IG  ++   
Sbjct: 149 IGTYEISIE 157


>gi|332995610|gb|AEF05665.1| hypothetical protein ambt_20870 [Alteromonas sp. SN2]
          Length = 424

 Score = 74.2 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 65/226 (28%), Gaps = 19/226 (8%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L LFSGG DS       +    +  T+S    Q  + +   +    +KI        +S
Sbjct: 139 CLTLFSGGMDSLIGAINLIKDGRKPVTIS----QVVQGDQAKQKLFPQKI----HSDIES 190

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           L   H   +      +         +        +      +   LV +      L    
Sbjct: 191 LVMSHKAKVPNGETPASQRSRSIAFLAYAALATSSLKNRNGSNTELVVSENGFISLNTPL 250

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
             +       S      H T  +    I    +  + + TP     K E     +    Q
Sbjct: 251 TPM----RVGSLSTRTTHPTYLSGIQEIFDSADIGLKIDTPYALKTKGEMLSECK---NQ 303

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
            L+  +  +S +C              C  C  C +R+  + ++ E
Sbjct: 304 SLIKELAHQSTSC----GRFLLFKKTHCGRCVPCLVRRSAFHKWGE 345


>gi|170290811|ref|YP_001737627.1| thiamine biosynthesis/tRNA modification protein ThiI [Candidatus
           Korarchaeum cryptofilum OPF8]
 gi|170174891|gb|ACB07944.1| thiamine biosynthesis/tRNA modification protein ThiI [Candidatus
           Korarchaeum cryptofilum OPF8]
          Length = 373

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 62/194 (31%), Gaps = 31/194 (15%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L L SGG DS       + R  ++  L F    ++  E E  + +   +       K 
Sbjct: 176 KVLALISGGIDSPVAAWLLMRRGAQIIPLHFR---KSSAEEETFIKIVNVLRRYSYGVK- 231

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                         +       + ++   ++       +  R +  L+ A  +A  +G  
Sbjct: 232 -------------MEPMILEHGEFLSEISREAREWTCLLCKRRM--LLTANRIAKEIGAH 276

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + +             V  PL+ + K +  K+A++IG 
Sbjct: 277 GIVTGDSLGQVAS---------QTLANLEVESRCLEKPVFRPLIGMDKEDIVKIAKEIGT 327

Query: 190 QDLVNLILEESHTC 203
            D+     E   +C
Sbjct: 328 YDISISYKE---SC 338


>gi|72161442|ref|YP_289099.1| thiamine biosynthesis protein ThiI [Thermobifida fusca YX]
 gi|71915174|gb|AAZ55076.1| thiamine biosynthesis protein [Thermobifida fusca YX]
          Length = 422

 Score = 73.8 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 60/193 (31%), Gaps = 25/193 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +   L+L SGG DS       + R  R++ L F                  K   L+ +
Sbjct: 200 MSGRGLVLLSGGIDSPVAAYRMMRRGLRLDFLHF------SGMPFTGPESIYKAYSLVRQ 253

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                    +  +                 +++++      +  +  + L  A  LA RL
Sbjct: 254 LDRFQNGSRLYVVPFGKA----------QQQLRNSGAERLQIVAQRRLMLKTAEALADRL 303

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
             + +V G      S          + +     L     + +  PL+ + K E    A+ 
Sbjct: 304 NASALVTGDALGQVSS---------QTLANITALDDAVDLPILRPLIGMDKTEIMDQARA 354

Query: 187 IGGQDLVNLILEE 199
           IG   +  L  E+
Sbjct: 355 IGTLTISELPDED 367


>gi|110005219|emb|CAK99545.1| probable thiamine biosynthesis protein [Spiroplasma citri]
          Length = 403

 Score = 73.8 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 58/192 (30%), Gaps = 31/192 (16%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           L++ SGG DS       + R   VE L F                 +K+  L+ K     
Sbjct: 184 LVMLSGGIDSPVASFLTMKRGMNVEYLHF------APPPHTTEEALQKVKTLVQKLNYYA 237

Query: 72  G----EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           G      +++  ++L             +    +      +  R    +      A  L 
Sbjct: 238 GQNQQRLYVVNFSMLQH----------ELMHIPDASYRIIIMRRMFYRIANLL--AKELK 285

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +       +TI A+         S + +  P++   K E   +A+ I
Sbjct: 286 CQAIITGESLGQVASQTIESINTINAV---------STLPILRPVLCFDKNEIIDIAKQI 336

Query: 188 GGQDLVNLILEE 199
                  L  E+
Sbjct: 337 DTYQTSILPFED 348


>gi|313674593|ref|YP_004052589.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Marivirga tractuosa DSM 4126]
 gi|312941291|gb|ADR20481.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Marivirga tractuosa DSM 4126]
          Length = 378

 Score = 73.8 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 67/239 (28%), Gaps = 26/239 (10%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIV 61
           + K    L+  SGG DSS       ++   V  ++    DY      + E   C    I 
Sbjct: 1   MSKKGRVLVAMSGGIDSSLAAVLLHEQGYEVIGMTMKTWDYASSGSSKKETGCCSLDSIN 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +      +     +IL +             +          PN  V     I       
Sbjct: 61  DARNLAVNLGFPHYILDIREEFGDYVIDHFTDE---YLAGRTPNPCVLCNTHIKWDSLLR 117

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLK 176
            A +LG   I  G                 + +    +  +             PL  L 
Sbjct: 118 RADKLGCDYIATGHYAKVREENGRYIISRGKDLNKDQSYALWGVSQESLSRTILPLGDLT 177

Query: 177 KYETWKLAQDIGGQDLVN--LILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
           K E  K+A+D G  +LVN     E    C++   D R               R +G  E
Sbjct: 178 KPEIRKMAEDKGFYELVNKSESYEI---CFVPDNDYRGFL----------KRRVEGLEE 223


>gi|159045765|ref|YP_001534559.1| hypothetical protein Dshi_3225 [Dinoroseobacter shibae DFL 12]
 gi|157913525|gb|ABV94958.1| hypothetical protein Dshi_3225 [Dinoroseobacter shibae DFL 12]
          Length = 479

 Score = 73.8 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 63/220 (28%), Gaps = 18/220 (8%)

Query: 12  LLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           +L+FSGG DS +       +   RV  +S      +    +     R     L   +  +
Sbjct: 39  VLMFSGGLDSLSGAVEEIAEHGQRVALVS------HFSATKIAPVQRYMQRSLADAFGAN 92

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
             +   + + ++G        ++ +                ++  + F       L +  
Sbjct: 93  TCQHVPVQVQMMGRSLKEGTHRSRSFLFAALGAI--TAEAFDLNRVSFHENGVVSLNLPP 150

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +   +                 A+   +  G    + V  P  W  K E  +    +   
Sbjct: 151 VGNVLGTRATRTTHPQTLSRFTALLGQVFQG---AMRVDNPYFWRTKKEVVETIARLNMA 207

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
           + + +    S +C       +      C  C  C  R +G
Sbjct: 208 EQIAV----SRSC--ADVHNQTRQHPHCGRCSQCIDRLEG 241


>gi|154414333|ref|XP_001580194.1| thiamine biosynthesis protein ThiI [Trichomonas vaginalis G3]
 gi|121914409|gb|EAY19208.1| thiamine biosynthesis protein ThiI, putative [Trichomonas vaginalis
           G3]
          Length = 436

 Score = 73.4 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 62/195 (31%), Gaps = 23/195 (11%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +  +   ++L SGG DS       + R  +V  + F        E    +   +KIV+ +
Sbjct: 199 VNTSGKTVVLLSGGFDSPVAAWSVMRRGCQVVYVHFH--SSPYGEWRSSVGKVRKIVQQL 256

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             W                D  +S        +I         V     + +  AA +A 
Sbjct: 257 ATWGGP-------------DTFYSVSIGEQQRQIALKGPSKLRVTLYRRLMVRIAAAIAK 303

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           R   T +  G      +        TI+A    +         +  PL+   K E  + A
Sbjct: 304 RNKCTALTTGDNLGQVASQTIESMTTIQAAINPL--------LILRPLLADSKEEIIEKA 355

Query: 185 QDIGGQDLVNLILEE 199
             IG +++  L   +
Sbjct: 356 ARIGTKEISVLPAGD 370


>gi|254172406|ref|ZP_04879081.1| thiamine biosynthesis protein ThiI [Thermococcus sp. AM4]
 gi|214033335|gb|EEB74162.1| thiamine biosynthesis protein ThiI [Thermococcus sp. AM4]
          Length = 197

 Score = 73.4 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 61/184 (33%), Gaps = 25/184 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+ L S G DS   +   L +   V  + F      + ++     V ++  +L      
Sbjct: 2   KAVTLLSSGIDSPVAIYLMLRKDVEVVPVHFRQDSIKEEKVHELWEVLRRYGKLDELIVV 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E+H+     L ++                            + L  A  + + +G +
Sbjct: 62  DFAEEHVPVFERLKELK----------------KERWTCVFCKWLMLRRACRIGHEVGAS 105

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I+ G      +          + ++  + +   S + V  PL+ L K E   +A++I  
Sbjct: 106 TIITGDSLGQVAS---------QTLDNLLIVSRASDLPVLRPLIGLDKEEIVWIAKEIRT 156

Query: 190 QDLV 193
            ++ 
Sbjct: 157 FEIS 160


>gi|261349629|ref|ZP_05975046.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Methanobrevibacter smithii DSM 2374]
 gi|288861587|gb|EFC93885.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Methanobrevibacter smithii DSM 2374]
          Length = 381

 Score = 73.4 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 57/187 (30%), Gaps = 23/187 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L S G DS   +   + R   V  L  D                 KI++ +  +  
Sbjct: 177 KVVVLVSSGIDSPVAVYLMMKRGCEVIALHCD---NAPFTGPKVHENFDKIIDQLQSYAK 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +     +                   + +D                  A  LA++ G +
Sbjct: 234 GVPITKKVV-----------KYGEYLQQAKDCAPEKMTCVLCKSGMYKIAEKLAHKYGAS 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + +   +       + + +PL+ L K E  ++A+DIG 
Sbjct: 283 AIVDGSSVGQVAS---------QTLSNILATRHGVDMPILSPLIGLDKLEITRIAEDIGT 333

Query: 190 QDLVNLI 196
            ++  L 
Sbjct: 334 FEISKLD 340


>gi|291300512|ref|YP_003511790.1| hypothetical protein Snas_3026 [Stackebrandtia nassauensis DSM
           44728]
 gi|290569732|gb|ADD42697.1| conserved hypothetical protein [Stackebrandtia nassauensis DSM
           44728]
          Length = 420

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 69/233 (29%), Gaps = 24/233 (10%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           A+ LFSGG DS            +V  +S   G                + E   + + +
Sbjct: 146 AVALFSGGLDSFCHAGLLRPA-SKVVLVSHGLGPN--------------LRERKRELRAA 190

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG + +  ++    +  +++                   G  +       TL        
Sbjct: 191 LGGETV--MSAEFQVRINAVPGTEREPHPRTRALLLLAAGVLVCAANGVDTLHCPENGLL 248

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
            +       +S            +  A+   ++    V  P   L K E  + A D G +
Sbjct: 249 ALHPAKAPLWSQSATPIPPMTVHLANALLDSLDVDTRVVNPYAELTKGEVCERAVDAGWR 308

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK---EKYQD 240
             +   L  + TC    +     +G  C  C  C +R    +       +Y+D
Sbjct: 309 RSL---LGRTITCVNPDKKSSGRFGN-CGYCRHCLVRHAALVRVGGDLTEYRD 357


>gi|197294645|ref|YP_001799186.1| thiamine biosynthesis protein ThiI [Candidatus Phytoplasma
           australiense]
 gi|171853972|emb|CAM11935.1| Thiamine biosynthesis protein [Candidatus Phytoplasma australiense]
          Length = 437

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 62/213 (29%), Gaps = 31/213 (14%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   L+  SGG DS      A+ +   +E L F      +      L   +K+++L    
Sbjct: 180 SGKGLVFLSGGIDSPVAAYLAMKKGIAIELLHF------EASPLTPLESVQKVIDLAKIL 233

Query: 68  KDS----LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    + H++P   L +  H                    +     +       +A
Sbjct: 234 SRYSANGQVKLHLIPFRTLQETIH------------QKVSDAYIINVMRRMMYRLGDQIA 281

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
                  ++ G      +                      +++ +  PL  + K +  ++
Sbjct: 282 KTNHHLCLINGESVGQVASQTLESMQ---------TTSCITNINILRPLAMMDKNQIIEI 332

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGY 216
           A++I   D+     ++  T YL  R        
Sbjct: 333 AKNIETFDISIRPFQDCCTVYLPSRPVTKPKTK 365


>gi|73667568|ref|YP_303583.1| thiazole biosynthesis protein [Methanosarcina barkeri str. Fusaro]
 gi|72394730|gb|AAZ69003.1| thiazole biosynthesis protein [Methanosarcina barkeri str. Fusaro]
          Length = 436

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 54/192 (28%), Gaps = 26/192 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++L SGG DS       + R   +  +  +       E   R    + I +L        
Sbjct: 230 VVLMSGGLDSPVAAWLMMKRGVMIIPVYCNTS--PYAENAARERAFECIRQLQKWAPGHQ 287

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
            + + LP                     D             +    A  +  + G + I
Sbjct: 288 FKTYELPHG------------PNLRTFIDICNRKNTCLLCKRMMYREAYEVMKKEGASGI 335

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           + G      +          +          +  + ++ PL+   K E   +A+ IG  D
Sbjct: 336 ITGSSLGQVAS---------QTAANMYAEIYQLAIPIYHPLIAFDKTEIIDIARKIGTYD 386

Query: 192 LVNLILEESHTC 203
           + +       +C
Sbjct: 387 ISSQPAG---SC 395


>gi|293385320|ref|ZP_06631133.1| conserved hypothetical protein [Enterococcus faecalis R712]
 gi|293386568|ref|ZP_06631151.1| conserved hypothetical protein [Enterococcus faecalis S613]
 gi|312908102|ref|ZP_07767082.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512]
 gi|312979005|ref|ZP_07790725.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516]
 gi|291077426|gb|EFE14790.1| conserved hypothetical protein [Enterococcus faecalis R712]
 gi|291083973|gb|EFE20936.1| conserved hypothetical protein [Enterococcus faecalis S613]
 gi|310625913|gb|EFQ09196.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512]
 gi|311288184|gb|EFQ66740.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516]
          Length = 424

 Score = 73.4 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 65/226 (28%), Gaps = 14/226 (6%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           + +FSGG DS       L       TL    YG  +K     +  + K+++        S
Sbjct: 137 VCMFSGGLDSFIGSIDILRGQTTSNTLFVSHYGGGSKGTKGYQDLLVKEMINHFSSLSLS 196

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                          + +   +            +      +   L+        L I  
Sbjct: 197 NFFS----FYSAAMKTPTGQDEPTTRSRSFMFFAHAIALTPDNAKLIIPENGFVSLNIPL 252

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
                   + S      H     +   I   +  +V +  P  +L K +      D   +
Sbjct: 253 YF----SRNGSSSTRTTHPFYMNLFQKILNILGINVRLENPYQFLTKGQMMNNCLD---K 305

Query: 191 DLVNLILEESHTCYLGKRDKRYE--WGYGCNSCPACYLRQKGWMEF 234
           + ++  +  + +C   ++ +         C  C  C +R+    EF
Sbjct: 306 EFLSRNIINTMSCSHPEQARWSGCSDPIHCGYCIPCTIRRASINEF 351


>gi|256962362|ref|ZP_05566533.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
 gi|256952858|gb|EEU69490.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
          Length = 427

 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 65/226 (28%), Gaps = 14/226 (6%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           + +FSGG DS       L       TL    YG  +K     +  + K+++        S
Sbjct: 140 VCMFSGGLDSFIGSIDILRGQTTSNTLFVSHYGGGSKGTKGYQDLLVKEMINHFSSLSLS 199

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                          + +   +            +      +   L+        L I  
Sbjct: 200 NFFS----FYSAAMKTPTGQDEPTTRSRSFMFFAHAIALTPDNAKLIIPENGFVSLNIPL 255

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
                   + S      H     +   I   +  +V +  P  +L K +      D   +
Sbjct: 256 YF----SRNGSSSTRTTHPFYMNLFQKILNILGINVRLENPYQFLTKGQMMNNCLD---K 308

Query: 191 DLVNLILEESHTCYLGKRDKRYE--WGYGCNSCPACYLRQKGWMEF 234
           + ++  +  + +C   ++ +         C  C  C +R+    EF
Sbjct: 309 EFLSRNIINTMSCSHPEQARWSGCSDPIHCGYCIPCTIRRASINEF 354


>gi|312136377|ref|YP_004003714.1| thiamine biosynthesis/tRNA modification protein thii
           [Methanothermus fervidus DSM 2088]
 gi|311224096|gb|ADP76952.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Methanothermus fervidus DSM 2088]
          Length = 373

 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 59/198 (29%), Gaps = 34/198 (17%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L SGG DS   L   + R   V  L FD      +         KK+ ++    + 
Sbjct: 176 KVIGLLSGGIDSPVALYLMMKRGCSVTALHFD------IRPFTIDGNIKKVKKISEVLES 229

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
               +  L +   GD+          +K        +       +    A  +A +    
Sbjct: 230 YSSGEFELLILKYGDV----------LKKIKKIAGKSTCIVCRHLMYKIAEKIAKKKNAH 279

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +        T               + + +PL+ + K E  K+A+ IG 
Sbjct: 280 AIVDGSSLGQVASQTLPNILTTH---------YGIEIPILSPLIGMDKTEIRKIAEKIGT 330

Query: 190 QDLVNLILEESHTCYLGK 207
            ++         +C    
Sbjct: 331 YEI---------SCESPD 339


>gi|218884002|ref|YP_002428384.1| Thiamine biosynthesis/tRNA modification protein ThiI
           [Desulfurococcus kamchatkensis 1221n]
 gi|254784222|sp|B8D4I6|THII_DESK1 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|218765618|gb|ACL11017.1| Thiamine biosynthesis/tRNA modification protein ThiI
           [Desulfurococcus kamchatkensis 1221n]
          Length = 482

 Score = 73.0 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 64/196 (32%), Gaps = 26/196 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  AL+LFSGG DS         R   V+ L   Y   +         V +K+ E     
Sbjct: 172 SGRALVLFSGGFDSPVAAWMIAKRGVEVDFLH--YVMGSSEVSRQAFSVARKLSEE---- 225

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      L+       +     +  +I++    +        +  + A  +A  LG
Sbjct: 226 ----------WLSSYNPRFITVDFTPLIAEIEERIEWSYRQVVLRALMYMVADKIATELG 275

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G   +  S           A   A+   +     +  PL+   K E  + ++ I
Sbjct: 276 YNTIVTGEALSQASSQTL-------ANLVAVESAVSPRSIILRPLIGFDKEEIIEYSRRI 328

Query: 188 GGQDLVNLILEESHTC 203
           G  D  + + E   TC
Sbjct: 329 GLYDYSSRVAE---TC 341


>gi|124027451|ref|YP_001012771.1| thiamine biosynthesis protein ThiI [Hyperthermus butylicus DSM
           5456]
 gi|123978145|gb|ABM80426.1| probable thiamine biosynthesis protein, ThiI [Hyperthermus
           butylicus DSM 5456]
          Length = 388

 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 56/182 (30%), Gaps = 23/182 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL+LFSGG DS     +   R   V+ L F       + +       +++   + +   
Sbjct: 181 RALVLFSGGLDSPVAAWYTAKRGVEVDLLHF------ILAVPASARDAERVGRRLAELWL 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              +  +  +            + V + I  N           +     A  +A + G  
Sbjct: 235 YGYKPKLFLVDF----------RPVTVTIASNTRRGYEQIVLRLAMYYAAQLIAEKHGYD 284

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      S               A+   +   + +  PL  + K E   + + IG 
Sbjct: 285 AVVTGESIGQVSSQTL-------KNMKAMAQALPLRLPLIRPLAGMDKEEIVTVCRRIGV 337

Query: 190 QD 191
            +
Sbjct: 338 YE 339


>gi|297181711|gb|ADI17893.1| thiamine biosynthesis ATP pyrophosphatase [uncultured Chloroflexi
           bacterium HF0200_06I16]
          Length = 397

 Score = 73.0 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 58/189 (30%), Gaps = 25/189 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +    ++ SGG DS       + R  +   + F                 +K V+L+   
Sbjct: 177 SGKVAVMLSGGIDSPVAAWQMMKRGCQAMFVHFH------SYPLVDRTSMEKAVDLVDHL 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                E ++  + +            +  +I  +  P+  V       +     LA R  
Sbjct: 231 NRHQYESNLFMVPL----------GEIQKQIILSCPPSYRVVLYRRFMVRITEALAKRNR 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      +          + +E    +   + + +  PL+   K E   ++QDI
Sbjct: 281 AKAIVTGESCGQVAS---------QTLENIAVVDNAAGMPILRPLIGNNKEEIVDMSQDI 331

Query: 188 GGQDLVNLI 196
           G      L 
Sbjct: 332 GTFSTSILP 340


>gi|330506692|ref|YP_004383120.1| thiamine biosynthesis/tRNA modification protein ThiI [Methanosaeta
           concilii GP-6]
 gi|328927500|gb|AEB67302.1| thiamine biosynthesis/tRNA modification protein ThiI [Methanosaeta
           concilii GP-6]
          Length = 399

 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 61/192 (31%), Gaps = 30/192 (15%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           L + SGG DS       + R   V  L FD            +   K+ V+++ +W    
Sbjct: 185 LAMISGGIDSPVAAWMMMRRGCTVSLLHFD-----SRPYADSIDQSKRCVQVLAEWTCGR 239

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
             + I             + K +             +  R +  +   A +  + G   +
Sbjct: 240 KINFI----------TVPIKKGIEKIQMHYPRATCILCRRLMYRIA--AQVMEKEGALGV 287

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V G      +          +A            V ++ PL+ + K E   LA+ IG  +
Sbjct: 288 VTGYSMGQVASQTAENILAEQAA---------IGVPIYHPLIAMDKSEIIDLARKIGTYE 338

Query: 192 LVNLILEESHTC 203
           +  +    + +C
Sbjct: 339 VTMV----TKSC 346


>gi|302036488|ref|YP_003796810.1| putative thiamine biosynthesis protein ThiI [Candidatus Nitrospira
           defluvii]
 gi|300604552|emb|CBK40884.1| putative Thiamine biosynthesis protein ThiI [Candidatus Nitrospira
           defluvii]
          Length = 392

 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 51/189 (26%), Gaps = 25/189 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +     L SGG DS       + R  +   + F                 +K+ EL+   
Sbjct: 178 SGKVACLISGGIDSPVAAYRMMKRGCKAVFVHF------SGRPLVSRDSEEKVQELVQLL 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                   +  +              +  +I  N      V     I +  A  LA R G
Sbjct: 232 TAYQYHSQLYIVPF----------GEIQREIVANAPAAFRVVLYRRIMVRIAEELARRHG 281

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +         + A            + +  PL+ + K E  + AQ I
Sbjct: 282 CWALVTGDSLGQVASQTPENLSVVEAAAE---------LPLLRPLIGMDKIEITEQAQQI 332

Query: 188 GGQDLVNLI 196
           G        
Sbjct: 333 GSFTTSIEP 341


>gi|217076484|ref|YP_002334200.1| thiamine biosynthesis protein ThiI [Thermosipho africanus TCF52B]
 gi|217036337|gb|ACJ74859.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermosipho
           africanus TCF52B]
          Length = 389

 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 64/196 (32%), Gaps = 26/196 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   +LL SGG DS     + + R   +ETLSF                + KI+EL    
Sbjct: 173 SGKGILLLSGGIDSPVAGWYMMKRGILIETLSF------LSPPFTSEKSKNKILELSNIL 226

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +          L             +K    +  +  +  R+++ +           
Sbjct: 227 SKYVP-------DTLKTWIVPFTPVQQYIKTNAPDKYSLIIQRRSMMRI----------- 268

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   +         +      + +E    +   S++ V  PL+  +K +  + A++I
Sbjct: 269 ANKLAKKIKAKAIITGENVGQVASQTLENLHTIESASNLPVLRPLIGFEKIDIVEKAKEI 328

Query: 188 GGQDLVNLILEESHTC 203
           G  ++      +  +C
Sbjct: 329 GSYEISIQPYLD--SC 342


>gi|294496272|ref|YP_003542765.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Methanohalophilus mahii DSM 5219]
 gi|292667271|gb|ADE37120.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Methanohalophilus mahii DSM 5219]
          Length = 391

 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 56/189 (29%), Gaps = 29/189 (15%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R  +V  +  +       E       R+K ++ +    D
Sbjct: 181 KMVVLLSGGIDSPVAAWLLMRRGVKVIPVFCN------NEPFSDEATRQKAIKCVKVLND 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                                +    MK+ +          R+   L     L  R    
Sbjct: 235 W--------------------SAGTPMKMYEVPNGKNLQAIRDNCSLKNTCILCKRTMYR 274

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINL---GMESHVTVHTPLMWLKKYETWKLAQD 186
                + +   SG          A +T  NL          ++ PL+   K E   +A+ 
Sbjct: 275 IAFEVMEKEKASGIITGSSLGQVASQTTYNLHAEIYGLGFPIYHPLISFDKTEIIDMARK 334

Query: 187 IGGQDLVNL 195
           IG  ++  L
Sbjct: 335 IGTFEISTL 343


>gi|150399415|ref|YP_001323182.1| thiamine biosynthesis/tRNA modification protein ThiI [Methanococcus
           vannielii SB]
 gi|150012118|gb|ABR54570.1| thiamine biosynthesis/tRNA modification protein ThiI [Methanococcus
           vannielii SB]
          Length = 385

 Score = 72.6 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 51/194 (26%), Gaps = 28/194 (14%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+L S G DS         R  ++  L           L+      +K  +L     D
Sbjct: 186 KVLVLLSDGIDSPVAAYMMAKRGCKLVLLH----------LKTSEEGLEKTKKLYDVLSD 235

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E   + +        +     +   +                 L  A   A      
Sbjct: 236 FDPEAKFIHIDF------TEELLRIKNDLTKIEREKYTCLFCKKTMLRTAERHASYQKCD 289

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I+ G      +                  +   +   +  PL+ L K E   +A+ IG 
Sbjct: 290 AIINGDNMGQVASQTLK---------NLRVVSEGTKYPILRPLIGLDKVEIMNIARKIGT 340

Query: 190 QDLVNLILEESHTC 203
            D+    + +  +C
Sbjct: 341 FDIS---ISKEISC 351


>gi|218263752|ref|ZP_03477748.1| hypothetical protein PRABACTJOHN_03438 [Parabacteroides johnsonii
          DSM 18315]
 gi|218222534|gb|EEC95184.1| hypothetical protein PRABACTJOHN_03438 [Parabacteroides johnsonii
          DSM 18315]
          Length = 73

 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/68 (39%), Positives = 37/68 (54%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          +K   +AL+ FSGGQDS+TCL WA   F RVE + F YGQ++ +E+E    +        
Sbjct: 1  MKHQEAALVCFSGGQDSTTCLFWAKKHFSRVEAVCFTYGQKHSLEIEVARKIAADADVPF 60

Query: 65 PKWKDSLG 72
               SL 
Sbjct: 61 QLLDVSLI 68


>gi|52548696|gb|AAU82545.1| thiamine biosynthesis ATP pyrophosphatase [uncultured archaeon
           GZfos18C8]
          Length = 381

 Score = 72.6 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 52/181 (28%), Gaps = 24/181 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L SGG DS       + R   V  L FD     +        + ++ +  + +W  
Sbjct: 173 KMIALVSGGIDSPVAAWMLMRRGAEVIPLYFD---LEEFTDPKSRELAEQSINSLFEWSY 229

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           S    + +P               V  +I     P         +       +A +    
Sbjct: 230 SDMTAYRVPYG------------AVLREIASRCEPRITCVICKRMMYRIGTLIAEKEYAC 277

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          +  +  +       + ++ PL+ + K E    A  IG 
Sbjct: 278 GIVTGSSLGQVAS---------QTSQNMLAEMHGLGMPIYHPLIGMDKREIIDRATRIGT 328

Query: 190 Q 190
            
Sbjct: 329 F 329


>gi|255318486|ref|ZP_05359719.1| ExsB family protein [Acinetobacter radioresistens SK82]
 gi|262378716|ref|ZP_06071873.1| ExsB superfamily [Acinetobacter radioresistens SH164]
 gi|255304478|gb|EET83662.1| ExsB family protein [Acinetobacter radioresistens SK82]
 gi|262300001|gb|EEY87913.1| ExsB superfamily [Acinetobacter radioresistens SH164]
          Length = 201

 Score = 72.3 bits (175), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 48/215 (22%), Positives = 81/215 (37%), Gaps = 33/215 (15%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            ++LL SGG DS+    W          L+ DYGQ             K  +        
Sbjct: 2   KSVLLLSGGMDSTAIAWWKRPD----YALTIDYGQL----------AAKAEIAASQSICR 47

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            L   H +      +I    +   +      +   + + P RN + +  A        I+
Sbjct: 48  YLNIPHEILTVDCRNIGSGDMAGTIE---SKHAPASDWWPYRNQLLITLAGMKMLPFNIS 104

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I+IG  +TD +G+ D  H+ I A+   + L  E H+TV  P + L   E  +L+     
Sbjct: 105 KILIGTVKTD-NGHTDGSHEFIDAMNQLMFL-QEGHITVEAPAINLSTKELIQLS----- 157

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPAC 224
            ++   +L  SH+C+  +          C +C  C
Sbjct: 158 -NIPAELLAWSHSCHKSEVT--------CGNCRGC 183


>gi|281357010|ref|ZP_06243500.1| thiamine biosynthesis/tRNA modification protein ThiI [Victivallis
           vadensis ATCC BAA-548]
 gi|281316568|gb|EFB00592.1| thiamine biosynthesis/tRNA modification protein ThiI [Victivallis
           vadensis ATCC BAA-548]
          Length = 400

 Score = 72.3 bits (175), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 59/195 (30%), Gaps = 25/195 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            P  L L SGG DS       + R    + ++F                  K+  +    
Sbjct: 190 NPKVLTLLSGGIDSPVAAWQIMKRGCPTDFITFH------SAPYTPPETVDKVRGIAEHL 243

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                +  +L L  L           +   I+DN              L  A  +A   G
Sbjct: 244 NTFQ-QHGVLHLCNLA---------PMQKLIRDNCNERFRTVLYRRAMLRIAEQVAKNTG 293

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +                  +     + V  PL+   K E+ ++A +I
Sbjct: 294 CRALVTGEAVGQVASQTIV---------NMNTINRAVDMLVLRPLVGADKLESIRIAGEI 344

Query: 188 GGQDLVNLILEESHT 202
           G  +L N+ + +S T
Sbjct: 345 GTLELSNVQVPDSCT 359


>gi|82617281|emb|CAI64186.1| probable thiamine biosynthesis protein [uncultured archaeon]
          Length = 404

 Score = 72.3 bits (175), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 52/181 (28%), Gaps = 24/181 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L SGG DS       + R   V  L FD     +        + ++ +  + +W  
Sbjct: 196 KMIALVSGGIDSPVAAWMLMRRGAEVIPLYFD---LEEFTDPKSRELAEQSINSLFEWSY 252

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           S    + +P               V  +I  +  P         +       +A +    
Sbjct: 253 SDMTAYRVPYG------------AVLSEIASHCEPRITCVICKRMMYRIGTLVAEKEAAC 300

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          +  +          + ++ PL+ + K E    A  IG 
Sbjct: 301 GIVTGSSLGQVAS---------QTSQNMFAEIHGLGMPIYHPLIGMDKREIIDRAIRIGT 351

Query: 190 Q 190
            
Sbjct: 352 F 352


>gi|283853712|ref|ZP_06370941.1| ExsB family protein [Desulfovibrio sp. FW1012B]
 gi|283570890|gb|EFC18921.1| ExsB family protein [Desulfovibrio sp. FW1012B]
          Length = 201

 Score = 72.3 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 43/219 (19%), Positives = 76/219 (34%), Gaps = 35/219 (15%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIVELMP 65
              ++ +L SGG DS++   W    F      + DYGQ+  + E+     V K+I     
Sbjct: 1   MVKNSAILLSGGMDSTSLAFWKKPNF----AFTIDYGQKAAMAEIRAARQVAKEIGISHD 56

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                      +  + LG    +            N     + P RN + +  AA  A  
Sbjct: 57  TIA--------IDCSSLGSGDMAMAAPLP------NAPSTDWWPFRNQLLITLAAMKAIC 102

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
             I  + IG+ ++D S    C     +   T      E ++ V  P + +   E   +++
Sbjct: 103 RNINLLYIGLVKSDSSYKDGCSDFVDKISRTLSF--QEGNIEVMAPAIDMTAAELVNMSK 160

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPAC 224
                 +   +L  SH+C        +   + C  C  C
Sbjct: 161 ------IPRTLLAWSHSC--------HVSDFACGRCRGC 185


>gi|220933038|ref|YP_002509946.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Halothermothrix orenii H 168]
 gi|254784226|sp|B8D0L5|THII_HALOH RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|219994348|gb|ACL70951.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Halothermothrix orenii H 168]
          Length = 396

 Score = 71.9 bits (174), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 61/181 (33%), Gaps = 25/181 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS      A+ R   +E L F                ++K+++L         +  +  
Sbjct: 192 IDSPVAGWLAMKRGIELEALYFH------SFPYTSDRAKEKVIDLTKVLSRYCKKIKLYV 245

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
                         ++   IQ+N     ++     +    A  +A + G   ++ G    
Sbjct: 246 ----------GYFTDIQRAIQENCPQKYYITIMRRMMYRMAERIARKNGDLVLITGESVG 295

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
             +          + +E+   +   +++ V  PL  + K E   LA++IG  D+  L  E
Sbjct: 296 QVAS---------QTLESMNVINEVTNMPVLRPLATMNKTEIMDLAREIGTYDISILPHE 346

Query: 199 E 199
           +
Sbjct: 347 D 347


>gi|260222250|emb|CBA31625.1| hypothetical protein Csp_D28060 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 82

 Score = 71.9 bits (174), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/67 (50%), Positives = 46/67 (68%), Gaps = 8/67 (11%)

Query: 174 WLKKYETWKLAQDIG--------GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACY 225
           W+ K +TW+LA ++G        GQ LV+L++E +HTCYLG R  R+ WGYGC +CPAC 
Sbjct: 5   WINKAQTWELAHELGERSGVPEGGQALVDLVVEHTHTCYLGDRTHRHAWGYGCGTCPACE 64

Query: 226 LRQKGWM 232
           LR KG+ 
Sbjct: 65  LRAKGYA 71


>gi|39938629|ref|NP_950395.1| thiamine biosynthesis protein ThiI [Onion yellows phytoplasma OY-M]
 gi|39721738|dbj|BAD04228.1| thiamine biosynthesis protein [Onion yellows phytoplasma OY-M]
          Length = 434

 Score = 71.9 bits (174), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 65/198 (32%), Gaps = 31/198 (15%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS-- 70
           +L SGG DS      A+ +   VE L F      +      L   +K+++L         
Sbjct: 191 VLMSGGIDSPVAAYLAMKKGITVELLHF------ESSPLTPLESIQKVIDLAKVLSRYAF 244

Query: 71  --LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + H++P   L +                  L +  +     +    A+  A++   
Sbjct: 245 GNQIKLHLVPFRYLQETIT------------KTVLDSYIINVMRRMMYRLASQFAFQKNH 292

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++ G      +        T   +         + +T+  PL+ + K E  K+A+ I 
Sbjct: 293 LCLINGESVGQVASQTLESMQTTTQV---------TSMTILRPLVTMDKNEIIKIAKQID 343

Query: 189 GQDLVNLILEESHTCYLG 206
             D+      +  T YL 
Sbjct: 344 TFDISIRAFHDCCTLYLP 361


>gi|50365401|ref|YP_053826.1| thiamin biosynthesis protein [Mesoplasma florum L1]
 gi|50363957|gb|AAT75942.1| thiamin biosynthesis protein [Mesoplasma florum L1]
          Length = 400

 Score = 71.5 bits (173), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 25/195 (12%), Positives = 55/195 (28%), Gaps = 24/195 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   L L SGG DS       + R   V+ + F                  K+ EL    
Sbjct: 175 SGKGLSLLSGGIDSPVASFLTMKRGMHVDFIHF------MTPPHTSPEALDKVFELAKIV 228

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                +   L +     +          ++          +  R  + +      A + G
Sbjct: 229 SKYNSKKFNLYVCDFSMLLQ-------ELQHMPEESYKITIMRRMFMRIANKL--AKQNG 279

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +       D I +            + +  P++   K E   +++ I
Sbjct: 280 QEALITGESLGQVASQTIQSIDVINSTSE---------LPILRPVLTYDKEEIILISKFI 330

Query: 188 GGQDLVNLILEESHT 202
              +   L  +++ +
Sbjct: 331 KSYETSILPFDDACS 345


>gi|85057857|ref|YP_456773.1| thiamine biosynthesis protein ThiI [Aster yellows witches'-broom
           phytoplasma AYWB]
 gi|84789962|gb|ABC65694.1| thiamine biosynthesis protein ThiI [Aster yellows witches'-broom
           phytoplasma AYWB]
          Length = 434

 Score = 71.5 bits (173), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 64/198 (32%), Gaps = 31/198 (15%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS-- 70
           +L SGG DS      A+ +   VE L F      +      L   +K+++L         
Sbjct: 191 VLMSGGIDSPVAAYLAMRKGITVELLHF------ESSPLTPLESIQKVIDLAKVLSRYAF 244

Query: 71  --LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + H++P                  KI    L +  +     +    A+  A +   
Sbjct: 245 GNQIKLHLVPFRYF------------QEKITKTVLDSYIINIMRRMMYRLASQFACQKNH 292

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++ G      +        TI  +           +T+  PL+ + K E  K+A+ I 
Sbjct: 293 LCLINGESVGQVASQTLESMQTITQVTN---------MTILRPLVTMDKNEIIKIAKQID 343

Query: 189 GQDLVNLILEESHTCYLG 206
             D+      +  T YL 
Sbjct: 344 TFDISIRAFHDCCTLYLP 361


>gi|312129941|ref|YP_003997281.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Leadbetterella byssophila DSM 17132]
 gi|311906487|gb|ADQ16928.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Leadbetterella byssophila DSM 17132]
          Length = 368

 Score = 71.5 bits (173), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 69/239 (28%), Gaps = 26/239 (10%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIV 61
           + K    L+  SGG DSS       ++   V  ++    DY      + E   C    I 
Sbjct: 1   MTKRGRVLVAMSGGIDSSLAAVLLHEQGYEVVGMTMKTWDYASSGGTKKETGCCSLDSIN 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +      +     +IL    +      S+  +   +  +   PN  V     I       
Sbjct: 61  DARAIAVNLGFPHYILD---IRSEFGDSVIDHFTGEYLEGRTPNPCVLCNTHIKWDALLR 117

Query: 122 LAYRLGITNIVIGVCETDYSGYPDC-----RHDTIRAIETAINLGMESHVTVHTPLMWLK 176
            A  L    I  G                 +  T         +  ES      PL  L 
Sbjct: 118 RADNLNCEFIATGHYAKIRQENGRYVISRGKDTTKDQSYVLWGVSQESLSRTLLPLGDLT 177

Query: 177 KYETWKLAQDIGGQDLVN--LILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
           K E  ++A+  G  DLVN     E    C++   D R               R +G  E
Sbjct: 178 KAEIREMARQKGFYDLVNKSESYEI---CFVPDNDYRGFL----------KRRIEGLEE 223


>gi|261403856|ref|YP_003248080.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Methanocaldococcus vulcanius M7]
 gi|261370849|gb|ACX73598.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Methanocaldococcus vulcanius M7]
          Length = 376

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 55/184 (29%), Gaps = 25/184 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL L S G DS       + R  RV  L           L+       K+ +++    D
Sbjct: 186 RALCLISDGIDSPVAAFMMIRRGCRVVLLH----------LKMSEEALNKVRKIVEILSD 235

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              +   +      D++      N+  K+      N          L  A   A  L   
Sbjct: 236 YDTDLEFVVYDYKKDMN------NLIEKLSQIKKENYTCIFCKKNMLKVAKKYAKYLDCD 289

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I+ G      +                  +       +  PL+ L K E  K+A++IG 
Sbjct: 290 AIITGDNLGQVASQTLK---------NLRVISEGVDYLILRPLIGLDKDEIIKIAKNIGT 340

Query: 190 QDLV 193
            ++ 
Sbjct: 341 YEIS 344


>gi|328948437|ref|YP_004365774.1| tRNA sulfurtransferase [Treponema succinifaciens DSM 2489]
 gi|328448761|gb|AEB14477.1| tRNA sulfurtransferase [Treponema succinifaciens DSM 2489]
          Length = 409

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 51/181 (28%), Gaps = 25/181 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS       + R  +VE + F                ++K+ +L         + H+  
Sbjct: 194 IDSPVAGYRMMRRGMKVECVYFH------SYPYTSEEAQQKVQDLAKIIAQYGNDTHLNV 247

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
           ++             V MKI+             +  +  A  LA R+    I+ G    
Sbjct: 248 ISF----------TEVQMKIKQKTPEAYSTLMLRLCMMKAANMLAERINCDCIITGESLG 297

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
             +           +              +  PL+ L K E    A  IG  +   L  E
Sbjct: 298 QVASQTIENLAVTESFAEK---------PLVRPLIGLDKEEIMDTANFIGTYETSILPYE 348

Query: 199 E 199
           +
Sbjct: 349 D 349


>gi|326800569|ref|YP_004318388.1| tRNA-specific 2-thiouridylase mnmA [Sphingobacterium sp. 21]
 gi|326551333|gb|ADZ79718.1| tRNA-specific 2-thiouridylase mnmA [Sphingobacterium sp. 21]
          Length = 362

 Score = 71.1 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 56/199 (28%), Gaps = 12/199 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIV 61
           + K    L+  SGG DSS       ++   V  L+    DY        E   C    I 
Sbjct: 1   MSKHGRILVAMSGGVDSSVAAVMLHEQGYEVIGLTMKTWDYASSGGSTKETGCCSLDSIN 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +            +IL +          +  N   +      PN  V     I       
Sbjct: 61  DARALAVGYGFPHYILDIRD---EFGDFVINNFVDEYLAGRTPNPCVLCNTHIKWEALLK 117

Query: 122 LAYRLGITNIVIGVCE------TDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
            A +L    I  G         +        R +          +  ++      PL   
Sbjct: 118 RADKLDCEFIATGHYANIRLQDSGRYVISKGRDEHKDQSYVLWGVSQKNLARTKFPLGSF 177

Query: 176 KKYETWKLAQDIGGQDLVN 194
            K E  ++A ++G  +L N
Sbjct: 178 TKAEIRQMALEMGQVELAN 196


>gi|15669121|ref|NP_247926.1| hypothetical protein MJ_0931 [Methanocaldococcus jannaschii DSM
           2661]
 gi|2501552|sp|Q58341|THII_METJA RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|1591602|gb|AAB98933.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 381

 Score = 71.1 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 55/184 (29%), Gaps = 25/184 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L L S G DS       + R  R   L           L+       K+ +++    D
Sbjct: 190 KVLCLISDGIDSPVAAFMMIRRGCRAVLLH----------LKMSEEALNKVRKIVEVLSD 239

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E   +      DI      +++  K++     N          L  A   A  L   
Sbjct: 240 YDTELEFVVYDYKKDI------EDIVEKLKSIKKENYTCIFCKRKMLKVAEKYAKYLDCD 293

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +                  +    +  +  PL+ L K +  K+A++IG 
Sbjct: 294 AIVTGDNLGQVASQTLK---------NLRVISENINYPILRPLIGLDKNDIVKIAKEIGT 344

Query: 190 QDLV 193
            ++ 
Sbjct: 345 YEIS 348


>gi|153953713|ref|YP_001394478.1| tRNA-specific 2-thiouridylase MnmA [Clostridium kluyveri DSM 555]
 gi|219854333|ref|YP_002471455.1| hypothetical protein CKR_0990 [Clostridium kluyveri NBRC 12016]
 gi|205813712|sp|A5N749|MNMA_CLOK5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|146346594|gb|EDK33130.1| TrmU [Clostridium kluyveri DSM 555]
 gi|219568057|dbj|BAH06041.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 356

 Score = 71.1 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 56/210 (26%), Gaps = 10/210 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK-KIVELMP 65
            A   ++  SGG DSS       ++   V  ++    Q +    +          VE   
Sbjct: 1   MAKKVVVGMSGGVDSSVAAHLLKEQGYEVIGVTMQVWQEDDYYEDMESGCCSLSAVEDAK 60

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                L   H +      +    ++      +  +   PN  +     I        A  
Sbjct: 61  MVAYHLNIPHYVM--NFKEAFKKNVIDYFIQEYMEGKTPNPCIACNKYIKFDELLKRAMD 118

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK-----KYET 180
           LG   +  G   T             +         + +          +      K E 
Sbjct: 119 LGADYVATGHYATVEKINDRYTLRKSKDHNKDQTYALYNLTQFQLAHTLMPCGIYKKEEI 178

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDK 210
            ++A++IG         EE   C++   D 
Sbjct: 179 REIAREIGLMVHSKRDSEEI--CFIPDNDH 206


>gi|256383786|gb|ACU78356.1| thiamine biosynthesis/tRNA modification protein ThiI [Mycoplasma
           mycoides subsp. capri str. GM12]
 gi|256384616|gb|ACU79185.1| thiamine biosynthesis/tRNA modification protein ThiI [Mycoplasma
           mycoides subsp. capri str. GM12]
 gi|296455645|gb|ADH21880.1| thiamine biosynthesis/tRNA modification protein ThiI [synthetic
           Mycoplasma mycoides JCVI-syn1.0]
          Length = 395

 Score = 71.1 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 52/192 (27%), Gaps = 24/192 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   L L SGG DS       L R  +V+ + F                  K+  L  K 
Sbjct: 175 SDKGLCLLSGGIDSPVSAFLTLKRGMQVDFIHF------MTPPHTSYQALDKVFNLAKKI 228

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                 +  L +     +          ++   +      +  R  +             
Sbjct: 229 AKYNLSNFKLHICDFNLLLQ-------ELQHLIDPSYKITIMRRMFL-----------RI 270

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I                    + I++   +   S + +  P++   K E  K+A+ I
Sbjct: 271 ANIIAKNNNNKAIITGESLGQVASQTIQSINVINNVSDLPILRPVITYDKEEIIKIAKFI 330

Query: 188 GGQDLVNLILEE 199
              +   L  ++
Sbjct: 331 DTYETSILPFDD 342


>gi|205814682|sp|Q11UP4|MNMA_CYTH3 RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 368

 Score = 71.1 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 58/198 (29%), Gaps = 11/198 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIV 61
           + K    L+  SGG DSS       ++   V  ++    DY      + E   C    I 
Sbjct: 1   MSKKGRVLVAMSGGIDSSVAAVMLHEQGYEVIGMTMKTWDYANLGGSKKETGCCSLDSIN 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +            +I+    + +     +  +   +  D   PN  V     I       
Sbjct: 61  DARNIAVSLGFPHYIVD---IREEFGDYVINHFNKEYLDGRTPNPCVLCNTHIKWDSLLR 117

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLK 176
            A ++    I  G      S            +          +  +S      PL  L 
Sbjct: 118 RADKMDCDFIATGHYAQVRSENNRFVISKGLDENKDQSYALWGISQQSLSRTMFPLGHLH 177

Query: 177 KYETWKLAQDIGGQDLVN 194
           K +   +A + G  DLVN
Sbjct: 178 KTDIRAMAAERGFMDLVN 195


>gi|14520567|ref|NP_126042.1| hypothetical protein PAB0226 [Pyrococcus abyssi GE5]
 gi|5457783|emb|CAB49273.1| thiI thiamin biosynthesis protein thiI [Pyrococcus abyssi GE5]
          Length = 198

 Score = 71.1 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 61/184 (33%), Gaps = 23/184 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L S G DS   +     +   V  L F      K +      VR+ +  L     D
Sbjct: 2   KVVALLSSGIDSPVAIHLVASKGAEVYPLHF------KQDDVKENKVRRIVKRLQEIHGD 55

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            + +  I+    +           V  K+++                + A + A  +   
Sbjct: 56  KVKDPRIVDAFEVQG--------PVFEKLREIRKEKWTCIFCKYTMYIVATSYAREIKAK 107

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + ++  + +   + + +  PL+ L K E  ++A++IG 
Sbjct: 108 AIVTGDSLGQVAS---------QTLDNLMVMSTATELPILRPLIALDKEEIVRIAKEIGT 158

Query: 190 QDLV 193
            D+ 
Sbjct: 159 FDIS 162


>gi|257868162|ref|ZP_05647815.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
 gi|257874564|ref|ZP_05654217.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
 gi|257802276|gb|EEV31148.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
 gi|257808728|gb|EEV37550.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
          Length = 400

 Score = 70.7 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 60/232 (25%), Gaps = 36/232 (15%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +I       + LFSGG DS                                  +    V 
Sbjct: 105 EIPSSQKKCITLFSGGLDSLAGAYH-----------------------NFSSNILSDYVG 141

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
            + K ++      +L  +    I     ++              F   R++++L  A + 
Sbjct: 142 YVNKSEEQ--THQVLLQSFYNKIFSVHGSEIDIRNKYQKAKTFHFQSTRSLLYLSLAISK 199

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME------SHVTVHTPLMWLK 176
           A       I +             R  T       I L  E        + +     +  
Sbjct: 200 AISNSTREIRMYENGILSLNPEFGRFTTKTTHPKTIFLYNELLTALGYDIRILNKFEYKT 259

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQ 228
           K E                 ++ + TC   +  + Y+    C +C  C LR+
Sbjct: 260 KGEVIANM-----NFEFKSQIKNTFTCGKSRAGRHYKHKGQCGTCIPCILRK 306


>gi|227540270|ref|ZP_03970319.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sphingobacterium spiritivorum ATCC 33300]
 gi|227239914|gb|EEI89929.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sphingobacterium spiritivorum ATCC 33300]
          Length = 363

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 53/197 (26%), Gaps = 8/197 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIV 61
           + K    L+  SGG DSS       ++   V  ++    DY        E   C    I 
Sbjct: 1   MSKRGRVLVAMSGGVDSSVAAVMLHEQGYEVIGITMKTWDYASSGGSSKETGCCSLDSIN 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +      +      IL +             +  +  +  N             L+  A 
Sbjct: 61  DARALAVNYGFPHFILDIRDEFGDYVIDNFVDEYIAGRTPNPCVLCNTHIKWEALIKRAN 120

Query: 122 L----AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                    G    +       +      R +          +  E+      PL    K
Sbjct: 121 KLDCEFIATGHYANIRLHENGRHVISK-GRDENKDQSYVLWGVTQENLARTQFPLGSFTK 179

Query: 178 YETWKLAQDIGGQDLVN 194
            E  ++A D+G  +L N
Sbjct: 180 KEIRQMAADMGQMELAN 196


>gi|42560828|ref|NP_975279.1| thiamin biosynthesis protein [Mycoplasma mycoides subsp. mycoides
           SC str. PG1]
 gi|42492324|emb|CAE76921.1| Thiamin biosynthesis protein [Mycoplasma mycoides subsp. mycoides
           SC str. PG1]
 gi|301321417|gb|ADK70060.1| thiamine biosynthesis/tRNA modification protein ThiI [Mycoplasma
           mycoides subsp. mycoides SC str. Gladysdale]
          Length = 395

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 52/192 (27%), Gaps = 24/192 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   L L SGG DS       L R  +V+ + F                  K+  L  K 
Sbjct: 175 SDKGLCLLSGGIDSPVSAFLTLKRGMQVDFIHF------MTPPHTSYQALDKVFNLAKKL 228

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                 +  L +     +          ++   +      +  R  +             
Sbjct: 229 AKYNLSNFKLHICDFNLLLQ-------ELQHLIDPSYKITIMRRMFL-----------RI 270

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I                    + I++   +   S + +  P++   K E  K+A+ I
Sbjct: 271 ANIIAKNNNNKAIITGESLGQVASQTIQSINVINNVSDLAILRPVITYDKEEIIKIAKFI 330

Query: 188 GGQDLVNLILEE 199
              D   L  ++
Sbjct: 331 DTYDTSILPFDD 342


>gi|302380574|ref|ZP_07269039.1| thiamine biosynthesis/tRNA modification protein ThiI [Finegoldia
           magna ACS-171-V-Col3]
 gi|302311517|gb|EFK93533.1| thiamine biosynthesis/tRNA modification protein ThiI [Finegoldia
           magna ACS-171-V-Col3]
          Length = 391

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 54/181 (29%), Gaps = 25/181 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS         R  RV+ L F                 +K+ +L  +     G  +   
Sbjct: 190 IDSPVAAFLMAKRGVRVDCLHFH------SYPFTSQRGFEKVKQLAEEVSYYTGNINFYS 243

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
           + +L           V   I  N              +  A  +A    I  ++ G    
Sbjct: 244 VNLL----------PVYKAITKNCKERMMTIISRRFMMRIAERIANENKIDALITGESLG 293

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
             +          + I+    +   + + +  PL+   K E  ++A++IG  +   L  E
Sbjct: 294 QVAS---------QTIQGVSVINEVTSLPILRPLIASDKTEIIEIAREIGTYETSILPFE 344

Query: 199 E 199
           +
Sbjct: 345 D 345


>gi|300771093|ref|ZP_07080969.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sphingobacterium spiritivorum ATCC 33861]
 gi|300761763|gb|EFK58583.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sphingobacterium spiritivorum ATCC 33861]
          Length = 363

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 53/197 (26%), Gaps = 8/197 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIV 61
           + K    L+  SGG DSS       ++   V  ++    DY        E   C    I 
Sbjct: 1   MSKRGRVLVAMSGGVDSSVAAVMLHEQGYEVIGITMKTWDYASSGGSSKETGCCSLDSIN 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +      +      IL +             +  +  +  N             L+  A 
Sbjct: 61  DARALAVNYGFPHFILDIRDEFGDYVIDNFVDEYIAGRTPNPCVLCNTHIKWEALIKRAN 120

Query: 122 L----AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                    G    +       +      R +          +  E+      PL    K
Sbjct: 121 KLDCEFIATGHYANIRLHENGRHVISK-GRDENKDQSYVLWGVTQENLARTQFPLGSFTK 179

Query: 178 YETWKLAQDIGGQDLVN 194
            E  ++A D+G  +L N
Sbjct: 180 KEIRQMAADMGQMELAN 196


>gi|169824256|ref|YP_001691867.1| thiamine biosynthesis protein [Finegoldia magna ATCC 29328]
 gi|303233906|ref|ZP_07320555.1| thiamine biosynthesis/tRNA modification protein ThiI [Finegoldia
           magna BVS033A4]
 gi|238687724|sp|B0RZV0|THII_FINM2 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|167831061|dbj|BAG07977.1| thiamine biosynthesis protein [Finegoldia magna ATCC 29328]
 gi|302494831|gb|EFL54588.1| thiamine biosynthesis/tRNA modification protein ThiI [Finegoldia
           magna BVS033A4]
          Length = 391

 Score = 70.7 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 54/181 (29%), Gaps = 25/181 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS         R  RV+ L F                 +K+ +L  +     G  +   
Sbjct: 190 IDSPVAAFLMAKRGVRVDCLHFH------SYPFTSQRGFEKVKQLAEEVSYYTGNINFYS 243

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
           + +L           V   I  N              +  A  +A    I  ++ G    
Sbjct: 244 VNLL----------PVYKAITKNCKERMMTIISRRFMMRIAERIANENKIDALITGESLG 293

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
             +          + I+    +   + + +  PL+   K E  ++A++IG  +   L  E
Sbjct: 294 QVAS---------QTIQGVSVINEVTSLPILRPLIASDKTEIIEIAREIGTYETSILPFE 344

Query: 199 E 199
           +
Sbjct: 345 D 345


>gi|313665175|ref|YP_004047046.1| thiamine biosynthesis/tRNA modification protein ThiI [Mycoplasma
           leachii PG50]
 gi|312949656|gb|ADR24252.1| thiamine biosynthesis/tRNA modification protein ThiI [Mycoplasma
           leachii PG50]
          Length = 395

 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 55/192 (28%), Gaps = 24/192 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   L L SGG DS       L R  +V+ + F                  K+  L  + 
Sbjct: 175 SDKGLCLLSGGIDSPVSAFLTLKRGMQVDFIHF------MTPPHTSHQALDKVFSLARQL 228

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                 +  L +     +                      +     +FL  A  +A    
Sbjct: 229 AKYNISNFKLHICNFNLLLQELQHLIEPSYK---------ITIMRRMFLRIANIIAKNNN 279

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I+ G      +          + I++   +   S + +  P++   K E  K+A+ I
Sbjct: 280 NKAIITGESLGQVAS---------QTIQSINVINNVSDLPILRPVITYDKEEIIKIAKFI 330

Query: 188 GGQDLVNLILEE 199
                  L  ++
Sbjct: 331 DTYQTSILPFDD 342


>gi|154151581|ref|YP_001405199.1| thiamine biosynthesis/tRNA modification protein ThiI [Candidatus
           Methanoregula boonei 6A8]
 gi|154000133|gb|ABS56556.1| thiamine biosynthesis/tRNA modification protein ThiI [Methanoregula
           boonei 6A8]
          Length = 370

 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 63/182 (34%), Gaps = 22/182 (12%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           + L SGG DS       + R  ++  +            E  L   +++VE++ +++  L
Sbjct: 172 VALVSGGIDSPVATYMMMKRGCKIVPIYVA---LETFLDETVLARAERVVEILRQYQPDL 228

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
            +  ++  + L             +              R +  +     +A  +G   I
Sbjct: 229 -KLRVIHDSYLAA-------AKEELIRNHQEKYTCLFCKRRMYRIAQ--AVAQEVGAKGI 278

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V G      +          + ++  + L   + + V+ PL+   K +   LA++IG  +
Sbjct: 279 VNGESLGQVAS---------QTLDNLVVLSDVAEIPVYRPLIGFDKADAIALAREIGTFE 329

Query: 192 LV 193
             
Sbjct: 330 ES 331


>gi|331703278|ref|YP_004399965.1| thiamin biosynthesis protein [Mycoplasma mycoides subsp. capri LC
           str. 95010]
 gi|328801833|emb|CBW53986.1| Thiamin biosynthesis protein [Mycoplasma mycoides subsp. capri LC
           str. 95010]
          Length = 395

 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 51/192 (26%), Gaps = 24/192 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   L L SGG DS       L R  +V+ + F                  K+  L  K 
Sbjct: 175 SDKGLCLLSGGIDSPVSAFLTLKRGMQVDFIHF------MTPPHTSHQALDKVFNLAKKL 228

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                 +  L +     +          ++   +      +  R  +             
Sbjct: 229 AKYNLSNFKLHICDFNLLLQ-------ELQHLIDPSYKITIMRRMFL-----------RI 270

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I                    + I++   +   S + +  P++   K E  K+A+ I
Sbjct: 271 ANIIAKNNNNKAIITGESLGQVASQTIQSINVINNVSDLPILRPVITYDKEEIIKIAKFI 330

Query: 188 GGQDLVNLILEE 199
                  L  ++
Sbjct: 331 DTYQTSILPFDD 342


>gi|257063902|ref|YP_003143574.1| thiazole biosynthesis/tRNA modification protein ThiI [Slackia
           heliotrinireducens DSM 20476]
 gi|256791555|gb|ACV22225.1| thiazole biosynthesis/tRNA modification protein ThiI [Slackia
           heliotrinireducens DSM 20476]
          Length = 420

 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 51/190 (26%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L S G DS         R      + F          + +      + ++   +++
Sbjct: 184 KVVCLLSSGIDSPVATWRMARRGATCIGVHF------SGRPQTQSTSEYLVDDIAHVFEE 237

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G   I  +         +     A+           +       +  A  +A   G  
Sbjct: 238 FGGIARIFTVPFGDHQRKIAALVPPAL----------RIIIYRRFMMRVAERIARDEGAK 287

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      +       +   A+           + V  PL+   K E    A+ IG 
Sbjct: 288 ALVTGESLGQVASQTLDNINCTNAV---------VKMPVLRPLIGSDKLEIIADAKKIGT 338

Query: 190 QDLVNLILEE 199
            D+ +    +
Sbjct: 339 YDISSSPAPD 348


>gi|20094215|ref|NP_614062.1| thiamine biosynthesis ATP pyrophosphatase [Methanopyrus kandleri
           AV19]
 gi|19887243|gb|AAM01992.1| Thiamine biosynthesis ATP pyrophosphatase [Methanopyrus kandleri
           AV19]
          Length = 348

 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 53/183 (28%), Gaps = 25/183 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL L SGG DS       + R    + L F      + ELE      + +    P +  
Sbjct: 160 RALCLLSGGFDSPVATWMVMRRGLECKGLHF---LVTESELEAARENERVLRRWCPDFDL 216

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            + E H                   A +     L         +  L  A+  A RLG  
Sbjct: 217 LVDESHR-------------EFLETAEERLTGRLKRYLCVVCKMRMLERASQWADRLGCD 263

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +           +    I         V  PL+ L K E  +  + IG 
Sbjct: 264 CIVTGDSLGQVASQTVWNLKLEESQVNGI---------VLRPLVGLNKPEIVRYGRRIGV 314

Query: 190 QDL 192
            + 
Sbjct: 315 PER 317


>gi|313126312|ref|YP_004036582.1| thiamine biosynthesis ATP pyrophosphatase [Halogeometricum
           borinquense DSM 11551]
 gi|312292677|gb|ADQ67137.1| thiamine biosynthesis ATP pyrophosphatase [Halogeometricum
           borinquense DSM 11551]
          Length = 387

 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 54/187 (28%), Gaps = 24/187 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DS       + R      +  D G       + R    + I  L  +   
Sbjct: 180 RVAVLVSGGIDSPVAAWRLMRRGCIPIPVYVDLG--EYGGADHRARAFEVIRTLAARAPG 237

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 ++  +            +V  ++         +  R  + LV A  +A R G  
Sbjct: 238 EDLRPRVVDGS------------DVVDRLIAEVSETRMLSLRRAM-LVMAEAVARRDGAH 284

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
           ++  G      S                      + + +H PL+   K +    A+ IG 
Sbjct: 285 SVATGEALGQKSSQTGA---------NLAVTDEAATMPIHRPLLTTDKSDIVAEARRIGT 335

Query: 190 QDLVNLI 196
            D   L 
Sbjct: 336 YDDSTLP 342


>gi|21228619|ref|NP_634541.1| thiamine biosynthesis protein [Methanosarcina mazei Go1]
 gi|23822243|sp|Q8PU39|THII_METMA RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|20907117|gb|AAM32213.1| Thiamine biosynthesis protein [Methanosarcina mazei Go1]
          Length = 405

 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/184 (10%), Positives = 48/184 (26%), Gaps = 23/184 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   +  +  +    +              +  +  W  
Sbjct: 197 KMVVLMSGGLDSPVAAWLMMKRGVMIIPVYCN---TSPYAENAAKERAYDCIRQLQTWA- 252

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     +     ++            +             +    A  +  + G +
Sbjct: 253 ----------SGHQFTTYEIPHGPNLRSFIEMCDRKNTCLLCKRMMYREAYEIMKKEGAS 302

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I+ G      +          +          +  + ++ PL+   K E   +A+ IG 
Sbjct: 303 GIITGSSLGQVAS---------QTAANMHAEIYQLAIPIYHPLIAFDKSEIIDIARKIGT 353

Query: 190 QDLV 193
            D+ 
Sbjct: 354 YDIS 357


>gi|302528752|ref|ZP_07281094.1| predicted protein [Streptomyces sp. AA4]
 gi|302437647|gb|EFL09463.1| predicted protein [Streptomyces sp. AA4]
          Length = 448

 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 66/224 (29%), Gaps = 25/224 (11%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +LFSGG DSS  L+  L     +  +S       +   +      + +  L         
Sbjct: 143 VLFSGGLDSSAGLALRL-GGPPLLPVSV------RTNNDMAGVQERVLSRL------RGV 189

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL------AYRL 126
              +LP A        S T+    K +++      +     I +               +
Sbjct: 190 SREVLPAASFRVNLTESRTRAPGAKQENSQRSRGLLFLAAGIAVAITLGKGRLWFLENGI 249

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G  N+     +            T++A+             V TPL+ L K E       
Sbjct: 250 GAINLPYLRSQVGSQATRSAHPRTVQAMARLAGTLTGQDFAVETPLLGLTKAEAVSA--- 306

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
                     +  S +C       R      C +C +C LR++ 
Sbjct: 307 --VPPEYEHAIACSVSC-DTGFASRISGHPPCGTCTSCLLRRQA 347


>gi|83319792|ref|YP_424226.1| thiamine biosynthesis protein ThiI [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
 gi|83283678|gb|ABC01610.1| thiamine biosynthesis protein ThiI [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
          Length = 395

 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 52/192 (27%), Gaps = 24/192 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   L L SGG DS       L R  +V+ + F                  K+  L  + 
Sbjct: 175 SDKGLCLLSGGIDSPVSAFLTLKRGMQVDFIHF------MTPPHTSHQALDKVFSLARQL 228

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                 +  L +     +          ++   +      +  R  + +           
Sbjct: 229 AKYNISNFKLHICNFNLLLQ-------ELQHLVDPSYKITIMRRMFLRIANI-------- 273

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I                    + I++   +   S + +  P++   K E  K+A+ I
Sbjct: 274 ---IAKNNNNKAIITGESLGQVASQTIQSINVINNVSDLPILRPVITYDKEEIIKIAKFI 330

Query: 188 GGQDLVNLILEE 199
                  L  ++
Sbjct: 331 DTYQTSILPFDD 342


>gi|315425057|dbj|BAJ46730.1| thiamine biosynthesis protein ThiI [Candidatus Caldiarchaeum
           subterraneum]
          Length = 398

 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 62/192 (32%), Gaps = 27/192 (14%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   L L SGG DS+      + R  RV+ L                 V +KI EL+ K 
Sbjct: 169 SGRVLSLISGGVDSAVASLLLMKRGCRVDFLHLH------SYRTSDEAVDEKIGELVEKL 222

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +            L    +++        I D       V  R    L  A  +A   G
Sbjct: 223 TEY----------NLKSTLYTASFTPFYKHIWDKRTRLEIVLFRR-YLLRVAEEIALSRG 271

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V+G      +                I    +  + +  PL+ L K E  +LAQ  
Sbjct: 272 YRALVLGDSLAQVASQTLP----------NILAVGQPRIPIFRPLIGLDKSEIIELAQKY 321

Query: 188 GGQDLVNLILEE 199
           G  + V+   ++
Sbjct: 322 GVLETVSKPYKD 333


>gi|297588229|ref|ZP_06946872.1| thiamine biosynthesis/tRNA modification protein ThiI [Finegoldia
           magna ATCC 53516]
 gi|297573602|gb|EFH92323.1| thiamine biosynthesis/tRNA modification protein ThiI [Finegoldia
           magna ATCC 53516]
          Length = 391

 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 54/181 (29%), Gaps = 25/181 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS         R  RV+ L F                 +K+ +L  +     G  +   
Sbjct: 190 IDSPVAAFLMAKRGVRVDCLHFH------SYPFTSQRGFEKVKQLAEEVSYYTGNINFYS 243

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
           + +L           V   I  N              +  A  +A    I  ++ G    
Sbjct: 244 VNLL----------PVYKAITKNCKERMMTIISRRFMMRIAERIANENKIDALITGESLG 293

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
             +          + I+    +   + + +  PL+   K E  ++A++IG  +   L  E
Sbjct: 294 QVAS---------QTIQGVSVINEVTSLPILRPLIASDKTEIIEIAREIGTYETSILPFE 344

Query: 199 E 199
           +
Sbjct: 345 D 345


>gi|255522140|ref|ZP_05389377.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes FSL
           J1-175]
          Length = 272

 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 8/80 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+L+ SGG DS      A  R   +E + F                ++K V+L  K 
Sbjct: 177 SGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHFH------SPPYTSEQAKQKAVDLAAKL 230

Query: 68  KDSLG--EDHILPLAILGDI 85
               G  + HI+P   + ++
Sbjct: 231 AKYSGQVQMHIVPFTEIQEV 250


>gi|13475374|ref|NP_106938.1| hypothetical protein mll6423 [Mesorhizobium loti MAFF303099]
 gi|14026126|dbj|BAB52724.1| mll6423 [Mesorhizobium loti MAFF303099]
          Length = 198

 Score = 70.3 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 70/213 (32%), Gaps = 35/213 (16%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           LL SGG DS +   W          L+ DYGQ+            +  ++        LG
Sbjct: 5   LLLSGGMDSVSIAWWLRPD----VALTIDYGQKP----------AEAEIDAAGHVAQLLG 50

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
             H +       +    +              + + P RN + +  A   A R G++ ++
Sbjct: 51  ISHEVIRVDCSSLGSGDMAGTAPDAAA---PVSEWWPFRNQLLVTLAGMAAVRHGVSRLL 107

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL-AQDIGGQD 191
           IG   TD +          RA +  +    E  + V  P + L   E  +    D G   
Sbjct: 108 IGALATDGAHADGRPEFVERASQ--LMAMQEGGIVVEAPAIELDAVELVRRSGIDQGT-- 163

Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPAC 224
                L  +H+C+ G         Y C  C  C
Sbjct: 164 -----LAWAHSCHTGN--------YACGRCRGC 183


>gi|88603430|ref|YP_503608.1| thiamine biosynthesis protein [Methanospirillum hungatei JF-1]
 gi|88188892|gb|ABD41889.1| thiamine biosynthesis protein [Methanospirillum hungatei JF-1]
          Length = 369

 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 59/183 (32%), Gaps = 24/183 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELMPKWKDS 70
           + L SGG DS   +   + R   +  +       +     E    + + + +  P     
Sbjct: 172 VALHSGGIDSPVAMYMMMKRGTILHPVYVKIAPFHDDSSEERAHLIVEHLRKYQPDLTLE 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           + +D                   + +K +D       +  R++  +      A  +G   
Sbjct: 232 VIDD------------GHVYATRMELKKRDLEKYACVLCKRHLYRIAEQKARA--IGAKG 277

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      +          + ++    L     + V+ PL+   K ET  +A+ IG  
Sbjct: 278 IVTGESLAQVAS---------QTLDNLYVLDDAVSMPVYRPLIGFDKEETIAVAKKIGTY 328

Query: 191 DLV 193
           DL 
Sbjct: 329 DLS 331


>gi|20090325|ref|NP_616400.1| thiazole biosynthesis protein [Methanosarcina acetivorans C2A]
 gi|19915327|gb|AAM04880.1| thiazole biosynthesis protein [Methanosarcina acetivorans C2A]
          Length = 438

 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 49/185 (26%), Gaps = 23/185 (12%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++L SGG DS       + R   +  +  +       E   R      I +L        
Sbjct: 232 VVLMSGGLDSPVAAWLMMKRGVMITPVYCN--NSPYAEDAARERAFDCIRQLQTWAPGHQ 289

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
              + +P                                   +    A  +  ++G + I
Sbjct: 290 FATYEIPHG------------PNLRAFIGTCDRKNTCLLCKRMMYREAYEVMKKVGASGI 337

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           + G      +          +          +  + ++ PL+   K E   +A+ IG  D
Sbjct: 338 ITGSSLGQVAS---------QTAANMHAEIYQLAIPIYHPLIAFDKSEIVDIARRIGTYD 388

Query: 192 LVNLI 196
           +    
Sbjct: 389 ISTRP 393


>gi|299144367|ref|ZP_07037447.1| thiamine biosynthesis/tRNA modification protein ThiI [Peptoniphilus
           sp. oral taxon 386 str. F0131]
 gi|298518852|gb|EFI42591.1| thiamine biosynthesis/tRNA modification protein ThiI [Peptoniphilus
           sp. oral taxon 386 str. F0131]
          Length = 391

 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 52/181 (28%), Gaps = 25/181 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS         R  +++ L F                 +K+  L        G   I  
Sbjct: 188 IDSPVAGFLMAKRGVQIDALHFH------SYPFTSDRAEEKVHNLAKILSAYTGNLTIYS 241

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
           + +L           +  +I  N   +          +  A  ++ + G  +I+ G    
Sbjct: 242 VNLL----------PIQKEINKNCPEDEMTIISRRFMMRIAEKISDKNGYNSIITGENLG 291

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
             +       +    I   +         +  PL+ L K +   +A+ IG  +   L  E
Sbjct: 292 QVASQTIDGLNVTNRITDRL---------IFRPLIGLDKVDIMDIAKKIGTYETSILPFE 342

Query: 199 E 199
           +
Sbjct: 343 D 343


>gi|254775201|ref|ZP_05216717.1| thiamine biosynthesis protein ThiI [Mycobacterium avium subsp.
           avium ATCC 25291]
          Length = 409

 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 53/189 (28%), Gaps = 25/189 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A++L SGG DS      A+ R    + L                    K   L+ + 
Sbjct: 182 SGRAVVLLSGGFDSPVAAYRAMRRGLACDFLHC------TGAPFTDASSTYKAYALVRQL 235

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                   +            +        +  +      +  +  ++L  A  LA R+G
Sbjct: 236 TRFQPRSRLYV----------AAVGRAQRTLAASGAGEAQIVAQRRLYLRLACGLAERIG 285

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +                      + + V  P++   K E    A+ I
Sbjct: 286 AQAVVTGDSLGQVASQTLP---------NLAATEQAATLPVLRPMLGFDKQEILAEARRI 336

Query: 188 GGQDLVNLI 196
           G  ++  L 
Sbjct: 337 GTAEIAMLP 345


>gi|22001999|sp|Q8TQS4|THII_METAC RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
          Length = 412

 Score = 69.9 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 49/185 (26%), Gaps = 23/185 (12%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++L SGG DS       + R   +  +  +       E   R      I +L        
Sbjct: 206 VVLMSGGLDSPVAAWLMMKRGVMITPVYCN--NSPYAEDAARERAFDCIRQLQTWAPGHQ 263

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
              + +P                                   +    A  +  ++G + I
Sbjct: 264 FATYEIPHG------------PNLRAFIGTCDRKNTCLLCKRMMYREAYEVMKKVGASGI 311

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           + G      +          +          +  + ++ PL+   K E   +A+ IG  D
Sbjct: 312 ITGSSLGQVAS---------QTAANMHAEIYQLAIPIYHPLIAFDKSEIVDIARRIGTYD 362

Query: 192 LVNLI 196
           +    
Sbjct: 363 ISTRP 367


>gi|10945090|emb|CAC14206.1| hypothetical protein [Pseudomonas syringae pv. phaseolicola]
 gi|10945095|emb|CAC14209.1| hypothetical protein [Pseudomonas syringae pv. phaseolicola]
          Length = 81

 Score = 69.6 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 11/70 (15%)

Query: 166 VTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACY 225
            T+  PL  L K +  K    +G      +    + +CY          G  C  C +C 
Sbjct: 15  FTIRAPLQNLSKSDIVKAGAALG------VDYSLTVSCYQADD-----QGRACGKCDSCR 63

Query: 226 LRQKGWMEFK 235
           LR +G+    
Sbjct: 64  LRTEGFTAAG 73


>gi|325103525|ref|YP_004273179.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pedobacter saltans DSM 12145]
 gi|324972373|gb|ADY51357.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pedobacter saltans DSM 12145]
          Length = 362

 Score = 69.6 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 53/197 (26%), Gaps = 12/197 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIV 61
           + K    L+  SGG DSS       ++   V  L+    DY        E   C    I 
Sbjct: 1   MSKHGRILVAMSGGVDSSVAAVMLHEQGYEVIGLTMKTWDYASSGANSKETGCCSLDSIN 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +            +IL +             +          PN  V     I       
Sbjct: 61  DARSLAVGYGFPHYILDIRNEFGDYVIDNFVDE---YLAGRTPNPCVLCNTHIKWEALLK 117

Query: 122 LAYRLGITNIVIGVCETDYSGYPDC------RHDTIRAIETAINLGMESHVTVHTPLMWL 175
            A +L    I  G                  R +          +  E+      PL   
Sbjct: 118 RADKLDCEFIATGHYANIRQQDNGRYVISKGRDENKDQSYVLWGVSQENLARTKFPLGSF 177

Query: 176 KKYETWKLAQDIGGQDL 192
            K E  ++A D+G +DL
Sbjct: 178 TKAEIRQMAFDMGQEDL 194


>gi|256827205|ref|YP_003151164.1| thiazole biosynthesis/tRNA modification protein ThiI
           [Cryptobacterium curtum DSM 15641]
 gi|256583348|gb|ACU94482.1| thiazole biosynthesis/tRNA modification protein ThiI
           [Cryptobacterium curtum DSM 15641]
          Length = 410

 Score = 69.6 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 51/192 (26%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   + L S G DS   L     R      + F          +        + ++    
Sbjct: 181 SGRVVALLSSGIDSPVALWRMARRGAVCIAVHF------SGRPQTSATSEFLVDDIAHLL 234

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +       +  +         +LT    +           V     +    A  +A + G
Sbjct: 235 EHDGCIARVYVVPFGDYQREIALTVAPEL----------RVIMYRRLMFKVAEAIANQEG 284

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +          + I+         ++ +  PL+   K E    AQ +
Sbjct: 285 ARALVTGESLGQVAS---------QTIDNIFATASAVNLPIFRPLIGTDKQEIIADAQRL 335

Query: 188 GGQDLVNLILEE 199
           G   + +    +
Sbjct: 336 GSFPISSQDAPD 347


>gi|289596785|ref|YP_003483481.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Aciduliprofundum boonei T469]
 gi|289534572|gb|ADD08919.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Aciduliprofundum boonei T469]
          Length = 376

 Score = 69.6 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 63/182 (34%), Gaps = 24/182 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L S G DS       + R  ++  L            +  +   KKI+E++ ++  
Sbjct: 184 KLIMLISSGIDSPVAAYLMMKRGAKIIALHM-------KHSDSGVEKVKKILEVLEQYSP 236

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E  +         +H      ++ K+++ +             L  A  +A + G  
Sbjct: 237 RKIELVV--------KNHYEELSKISDKLREMHRERWTCVFCKYTMLKIADRIANKYGAL 288

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + +E        +   ++ PL+ + K E   +A++IG 
Sbjct: 289 GIVTGDSLGQVAS---------QTLENMYIESQATSYPIYRPLIGMDKNEIEGIAKNIGT 339

Query: 190 QD 191
            +
Sbjct: 340 YN 341


>gi|289192655|ref|YP_003458596.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Methanocaldococcus sp. FS406-22]
 gi|288939105|gb|ADC69860.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Methanocaldococcus sp. FS406-22]
          Length = 373

 Score = 69.6 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 53/184 (28%), Gaps = 25/184 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L L S G DS       + R  R   L           L+       K+ +++    D
Sbjct: 182 KVLCLISDGIDSPVAAFMMIRRGCRAVLLH----------LKMNEEALNKVRKIVEILSD 231

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E   +          S   K++  K++     N          L  A   A  L   
Sbjct: 232 YDTELEFVVYDY------SKDIKDIVEKLKSIKKENYTCIFCKRKMLKVAEKYAKYLDCD 285

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +                  +       +  PL+ L K +  ++A+DIG 
Sbjct: 286 AIVTGDNLGQVASQTLK---------NLRVISENISYPILRPLIGLDKNDIVEIAKDIGT 336

Query: 190 QDLV 193
            ++ 
Sbjct: 337 YEIS 340


>gi|89514485|gb|ABD75116.1| succinoglycan biosynthesis regulator ExsB [Sinorhizobium saheli]
          Length = 139

 Score = 69.6 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 16/150 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR-LCVRKKIVELMPKWK 68
           S + L SGG DS+     A++   ++  +  +YGQR             +K+        
Sbjct: 2   SVVALVSGGLDSTLIAYLAIEEGVKIHPIFVNYGQRALDRELAACEGAMRKLG------- 54

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E  +  L+  G +  S LT      ++D      F PGRN++FL+ AA  AY++G 
Sbjct: 55  ---LELTVADLSGYGVLIRSGLTDPSLRVLED-----AFTPGRNMLFLLVAAAHAYQVGA 106

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAI 158
             I IG+   + S +PD     ++  E  I
Sbjct: 107 DAISIGLLHEETSLFPDQTSAFLQEAEALI 136


>gi|254168750|ref|ZP_04875592.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Aciduliprofundum boonei T469]
 gi|197622376|gb|EDY34949.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Aciduliprofundum boonei T469]
          Length = 385

 Score = 69.6 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 63/182 (34%), Gaps = 24/182 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L S G DS       + R  ++  L            +  +   KKI+E++ ++  
Sbjct: 193 KLIMLISSGIDSPVAAYLMMKRGAKIIALHM-------KHSDSGVEKVKKILEVLEQYSP 245

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E  +         +H      ++ K+++ +             L  A  +A + G  
Sbjct: 246 RKIELVV--------KNHYEELSKISDKLREMHRERWTCVFCKYTMLKIADRIANKYGAL 297

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + +E        +   ++ PL+ + K E   +A++IG 
Sbjct: 298 GIVTGDSLGQVAS---------QTLENMYIESQATSYPIYRPLIGMDKNEIEGIAKNIGT 348

Query: 190 QD 191
            +
Sbjct: 349 YN 350


>gi|315171359|gb|EFU15376.1| conserved hypothetical protein [Enterococcus faecalis TX1342]
          Length = 400

 Score = 69.6 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 64/239 (26%), Gaps = 38/239 (15%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +I       + LFSGG DS     +          +S DY        E           
Sbjct: 105 EIPSSQKQCITLFSGGLDSLAGAYYNFSNN-----ISSDYVGYVNKSEER---------- 149

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ-DNNLPNTFVPGRNIIFLVFAAT 121
                       H + L        S+    V ++ +   +    F   R++++L  A +
Sbjct: 150 -----------THQVQLQAFYSQIFSAGGSEVDIRNKYQQSKKFYFQSTRSLLYLSLAIS 198

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL------GMESHVTVHTPLMWL 175
            A       I +             R+ T       I L       M   + +     + 
Sbjct: 199 RAISNSTNEIRMYENGILSLNPEFGRYTTKTTHPKTIFLYNELLTAMGYDIRILNKFEYQ 258

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
            K E                 +  + TC   +  K Y     C +C  C LR+     +
Sbjct: 259 TKGEVIANMD-----MAFKSEIRNTFTCGRSRAGKDYNHNGQCGTCIPCILRKISLAAY 312


>gi|123507556|ref|XP_001329441.1| thiamine biosynthesis protein ThiI [Trichomonas vaginalis G3]
 gi|121912396|gb|EAY17218.1| thiamine biosynthesis protein ThiI, putative [Trichomonas vaginalis
           G3]
          Length = 423

 Score = 69.6 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 61/195 (31%), Gaps = 22/195 (11%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           ++ +     L SGG DS   + + + R   V+ + F        E    +   +KIV ++
Sbjct: 183 VQSSGRVACLLSGGFDSPVAVWYMMRRGCAVQLVHFH--SAPYGEWRSSVSKIRKIVSVL 240

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            +W        I                    +I  +      +     + +  A  +  
Sbjct: 241 HQWGGPPKFYAI-------------PIGEQQRQIAVDAPDKLRITLYRRLMMRVAKKICE 287

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           R     +  G      +        TI ++ +   L       +  PL+   K E  + A
Sbjct: 288 RQHCEALATGDSLGQVASQTINSMTTIESVISPDML-------IFRPLLGFNKEEIMEKA 340

Query: 185 QDIGGQDLVNLILEE 199
           Q IG  D+  L   +
Sbjct: 341 QQIGTYDISILPAGD 355


>gi|332685708|ref|YP_004455482.1| thiamine biosynthesis protein ThiI [Melissococcus plutonius ATCC
           35311]
 gi|332369717|dbj|BAK20673.1| thiamine biosynthesis protein ThiI [Melissococcus plutonius ATCC
           35311]
          Length = 403

 Score = 69.6 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 57/188 (30%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +L+ SGG DS      ++ R   +E + F                 +K   L  K     
Sbjct: 181 MLMLSGGIDSPVAGYLSMKRGVEIEAVHF------SSPPYTSEEALEKAKNLAGKLAPYG 234

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G    + +              +  +I+        +     + L     +        I
Sbjct: 235 GSIQFIEVPF----------TEIQEEIKRIVPQGYLMTITRRLMLRLTEMICTLRNGLVI 284

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           + G      +          + + + + +   +   +  P++ + K E  ++A++I   +
Sbjct: 285 INGESLGQVAS---------QTLHSMVAINDVTTTPIIRPVVSMDKNEIIEIAEEIDTFE 335

Query: 192 LVNLILEE 199
           L     E+
Sbjct: 336 LAIQPFED 343


>gi|139438964|ref|ZP_01772424.1| Hypothetical protein COLAER_01430 [Collinsella aerofaciens ATCC
           25986]
 gi|133775675|gb|EBA39495.1| Hypothetical protein COLAER_01430 [Collinsella aerofaciens ATCC
           25986]
          Length = 366

 Score = 69.6 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 55/223 (24%), Gaps = 12/223 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               L+  SGG DSS        +       +                V + I +     
Sbjct: 3   NKRVLVAMSGGVDSSVTAYLLKSQGYECVGATMRLTCPAPDPTTGMSKVDRDIADAKAVA 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +      H+L    L      ++ +      Q+   PN  +     I        A  +G
Sbjct: 63  ERLGIPHHVLD---LQQTFDRNVIERFVNAYQEGLTPNPCIICNRHIKFGALLDAALDMG 119

Query: 128 ITNIVIGVCETDYSGY------PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY-ET 180
              I  G                              +L  E       PL  L K  + 
Sbjct: 120 CDYIATGHYAKTSQAADGTWQLHRGEDPKKDQSYFLYSLTQERLAHTIFPLAGLDKERDV 179

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPA 223
            ++A + G  +      E+   C++   D        C    A
Sbjct: 180 RRIAAEQGFTNAQKAESEDI--CFIPDGDYADYIERRCGHTAA 220


>gi|271964263|ref|YP_003338459.1| thiamine biosynthesis protein ThiI [Streptosporangium roseum DSM
           43021]
 gi|270507438|gb|ACZ85716.1| thiamine biosynthesis protein ThiI [Streptosporangium roseum DSM
           43021]
          Length = 400

 Score = 69.6 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 56/188 (29%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           L+L SGG DS       + R  RV+ L F                  K   L+       
Sbjct: 192 LVLMSGGIDSPVAAYRMMRRGLRVDFLHF------SGIPFTTSESIYKAYALVRALDRFQ 245

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G   +                     I+ +      V  +  + L  A  +A RL    +
Sbjct: 246 GRSRL----------WVVPFGKAQQSIKASGQDRLAVISQRRLMLKTAEEVARRLRAGAL 295

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           + G      S          + ++          + +  PL+ L K E    A+ IG  +
Sbjct: 296 ITGDSLGQVSS---------QTLQNITAQDDAVDLPILRPLIGLDKTEIMAEARRIGTLE 346

Query: 192 LVNLILEE 199
           +  L  E+
Sbjct: 347 ISELPDED 354


>gi|54023992|ref|YP_118234.1| thiamine biosynthesis protein ThiI [Nocardia farcinica IFM 10152]
 gi|81375240|sp|Q5YY71|THII_NOCFA RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|54015500|dbj|BAD56870.1| putative thiamin biosynthesis protein [Nocardia farcinica IFM
           10152]
          Length = 410

 Score = 69.2 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 56/188 (29%), Gaps = 25/188 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  AL+L SGG DS      A+ R    + + F                  K   L  + 
Sbjct: 179 SGRALVLLSGGYDSPVAAYRAMRRGLHCDFVHF------TGAPYTDPSSMYKAYALAREL 232

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                   +  + +       +      ++          +  R  ++L  A  LA R  
Sbjct: 233 GRYQTPARLYVVPVGNAQKTLATAGAEELQ----------IVARRRLYLRIAEELARRRQ 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +          + +   ++      + V  PL+   K E    A+ I
Sbjct: 283 RDALVTGDSLGQVAS---------QTLSNLVSADQACTLPVLRPLIGWDKQEIITEARRI 333

Query: 188 GGQDLVNL 195
           G  ++  L
Sbjct: 334 GTAEISVL 341


>gi|268316383|ref|YP_003290102.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Rhodothermus marinus DSM 4252]
 gi|262333917|gb|ACY47714.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Rhodothermus marinus DSM 4252]
          Length = 382

 Score = 69.2 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 54/203 (26%), Gaps = 14/203 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV----RKKI 60
           + +    L+  SGG DSS   +   ++   V  ++          +     V     + +
Sbjct: 1   MSRHGRVLVAMSGGVDSSVTAALLHEQGYEVVGITMKTWDYTSSGVRTGKEVGCCSLESM 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +             I+    + +     + +    +      PN  +     I      
Sbjct: 61  NDARAVAVRLGFPHFIVD---IREEFGDWVIERFTEEYLAGRTPNPCILCNTHIKWAALL 117

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHD-------TIRAIETAINLGMESHVTVHTPLM 173
             A RLG   I  G            R+                  +  E       PL 
Sbjct: 118 RRADRLGCDYIATGHYARIRYDESLGRYVISRGRDLNKDQSYVLWGIAQEHLARTLLPLG 177

Query: 174 WLKKYETWKLAQDIGGQDLVNLI 196
              K E  ++A ++G + L    
Sbjct: 178 DYTKPEIRRMAAEMGFERLAQKP 200


>gi|47091448|ref|ZP_00229245.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
           H7858]
 gi|47020125|gb|EAL10861.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
           H7858]
 gi|328467767|gb|EGF38813.1| hypothetical protein LM1816_05363 [Listeria monocytogenes 1816]
          Length = 400

 Score = 69.2 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 71/244 (29%), Gaps = 36/244 (14%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           ++       + LFSGG DS          ++ +  +S DY        E     +K++  
Sbjct: 105 ELPSPRKECITLFSGGLDSFAGSY-----YNFLNNISSDYVGYVNKAEE--RTYQKRLQS 157

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
              K   + G +  +                             F   R++++L  A + 
Sbjct: 158 FYRKIFSAGGSEVDI------------------RNKYQKPKIFYFQSTRSLLYLSLAISK 199

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME------SHVTVHTPLMWLK 176
           A    +  I +             R+ T       I L  +        + +     +  
Sbjct: 200 AISNSVKEIRMYENGILSLNPEFGRYTTKTTHPKTIFLYNKLLDTLGYDIRIVNKFEYET 259

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           K E  +              ++ + TC   +  K Y     C +C  C LR+     +  
Sbjct: 260 KGEIVENM-----NLEFKSQIKNTFTCGKSRVGKEYNHTGQCGACIPCILRKISLAAYDN 314

Query: 237 KYQD 240
           ++ D
Sbjct: 315 EHFD 318


>gi|16802357|ref|NP_463842.1| hypothetical protein lmo0312 [Listeria monocytogenes EGD-e]
 gi|224502395|ref|ZP_03670702.1| hypothetical protein LmonFR_07719 [Listeria monocytogenes FSL
           R2-561]
 gi|255028624|ref|ZP_05300575.1| hypothetical protein LmonL_04436 [Listeria monocytogenes LO28]
 gi|16409676|emb|CAD00839.1| lmo0312 [Listeria monocytogenes EGD-e]
          Length = 400

 Score = 69.2 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 71/244 (29%), Gaps = 36/244 (14%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           ++       + LFSGG DS          ++ +  +S DY        E     +K++  
Sbjct: 105 ELPSPRKECITLFSGGLDSFAGSY-----YNFLNNISSDYVGYVNKAEE--RTYQKRLQS 157

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
              K   + G +  +                             F   R++++L  A + 
Sbjct: 158 FYRKIFSAGGSEVDI------------------RNKYQKPKIFYFQSTRSLLYLSLAISK 199

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME------SHVTVHTPLMWLK 176
           A    +  I +             R+ T       I L  +        + +     +  
Sbjct: 200 AISNSVKEIRMYENGILSLNPEFGRYTTKTTHPKTIFLYNKLLDTLGYDIRIVNKFEYET 259

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           K E  +              ++ + TC   +  K Y     C +C  C LR+     +  
Sbjct: 260 KGEIVENM-----NLEFKSQIKNTFTCGKSRVGKEYNHTGQCGACIPCILRKISLAAYDN 314

Query: 237 KYQD 240
           ++ D
Sbjct: 315 EHFD 318


>gi|118464789|ref|YP_881907.1| thiamine biosynthesis protein ThiI [Mycobacterium avium 104]
 gi|118166076|gb|ABK66973.1| thiamine biosynthesis/tRNA modification protein ThiI [Mycobacterium
           avium 104]
          Length = 409

 Score = 69.2 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 53/189 (28%), Gaps = 25/189 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A++L SGG DS      A+ R    + L                    K   L+ + 
Sbjct: 182 SGRAVVLLSGGFDSPVAAYRAMRRGLACDFLHC------TGAPFTDASSTYKAYALVRQL 235

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                   +            +        +  +      +  +  ++L  A  LA R+G
Sbjct: 236 TRFQPRSRLYV----------AAVGRAQRTLAASGAGEAQIVAQRRLYLRLACGLAERIG 285

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +                      + + V  PL+   K E    A+ I
Sbjct: 286 AQAVVTGDSLGQVASQTLP---------NLAATEQAATLPVLRPLLGFDKQEILAEARRI 336

Query: 188 GGQDLVNLI 196
           G  ++  L 
Sbjct: 337 GTAEIAMLP 345


>gi|126465357|ref|YP_001040466.1| thiamine biosynthesis protein [Staphylothermus marinus F1]
 gi|126014180|gb|ABN69558.1| thiamine biosynthesis protein [Staphylothermus marinus F1]
          Length = 375

 Score = 69.2 bits (167), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 57/183 (31%), Gaps = 24/183 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++L SGG DSS    +A+ R  R+  +  D G             R++  E +    + +
Sbjct: 168 VVLLSGGVDSSLAAWYAMKRGARIIPVFIDLG------KYWSEQARRRFYEALSLVYEWV 221

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
             D I             +     +    N                 A+ +A +     I
Sbjct: 222 PWDKI---------KTYIVRGAEKILESTNIPARLRCLLCKANMYRIASIIADKEECLGI 272

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V G      +          + +     L   S   ++ P+ ++ K E  + A+ +G   
Sbjct: 273 VTGEAVGQVAS---------QTLRNLYILSSISPKPIYRPVAFMDKLEIIEQARKLGFHI 323

Query: 192 LVN 194
           L  
Sbjct: 324 LSR 326


>gi|312891399|ref|ZP_07750916.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mucilaginibacter paludis DSM 18603]
 gi|311296093|gb|EFQ73245.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mucilaginibacter paludis DSM 18603]
          Length = 362

 Score = 68.8 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 53/199 (26%), Gaps = 12/199 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIV 61
           + K    L+  SGG DSS       ++   V  L+    DY        E   C    I 
Sbjct: 1   MSKHGRILVAMSGGVDSSVAAVMLHEQGYEVIGLTMKTWDYASSGTNTKETGCCSLDSIN 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +            +IL    +       +  N   +      PN  V     I       
Sbjct: 61  DARALAVGYGFPHYILD---IRSEFGDFVIDNFVDEYLAGRTPNPCVLCNTHIKWEALLK 117

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCR------HDTIRAIETAINLGMESHVTVHTPLMWL 175
            A +L    I  G                               +   +      PL   
Sbjct: 118 RADKLDCEFIATGHYANIRQHDNGRYVISKGLDQNKDQSYVLWGVSQRNLARTRFPLGSF 177

Query: 176 KKYETWKLAQDIGGQDLVN 194
            K E  ++A+D+G  +L N
Sbjct: 178 AKAEIRQMAKDMGQLELAN 196


>gi|45358917|ref|NP_988474.1| thiamine biosynthesis protein [Methanococcus maripaludis S2]
 gi|45047783|emb|CAF30910.1| Thiamine biosynthesis protein:THUMP domain [Methanococcus
           maripaludis S2]
          Length = 383

 Score = 68.8 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 49/184 (26%), Gaps = 25/184 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L S G DS         R  ++  L            +      +K  +L+    D
Sbjct: 183 KVIVLLSDGIDSPVSAYMMAKRGCKLLLLHM----------KTSDEGLEKTQKLVDVLSD 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E   + +        +     +  ++ + N             L  A   A      
Sbjct: 233 FDPEAKFVYVDF------NEELAKIKAELTEINRDKYTCLYCKKYMLKLAEKHAKWHKCD 286

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +                  +       +  PL+ L K E   +A+ IG 
Sbjct: 287 AIVNGDNMGQVASQTLK---------NLRVISEGIDYPILRPLIGLDKVEIMDIARKIGT 337

Query: 190 QDLV 193
            D+ 
Sbjct: 338 FDIS 341


>gi|302343985|ref|YP_003808514.1| hypothetical protein Deba_2565 [Desulfarculus baarsii DSM 2075]
 gi|301640598|gb|ADK85920.1| hypothetical protein Deba_2565 [Desulfarculus baarsii DSM 2075]
          Length = 696

 Score = 68.8 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/230 (13%), Positives = 58/230 (25%), Gaps = 19/230 (8%)

Query: 12  LLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           ++LFSGG DS       A+    R+  ++             R   R   +         
Sbjct: 150 VMLFSGGLDSLGGAIEEAVINSRRIVMVTHK-----ATHKFNRRHRRLLDLLSSAAVHKP 204

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           L     +  +      ++  +++         +   F   R   +     +    +    
Sbjct: 205 LHIPVSINKSKFLGREYTQRSRSFLYAALGATVAQMFNLRRIRFYENGVISFNLPISAQV 264

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +                   I       +       TV  P +W  K E        G  
Sbjct: 265 V-------GARATRTTHPQVINGFANIFSTLSGQPFTVENPFIWKTKTEVVSDIVKAGCA 317

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
           D +      +HT          +    C +C  C  R+   +    +  D
Sbjct: 318 DTIKFSTSCTHT------WAMTKLNTHCGTCSQCIDRRFAVLAADAQEHD 361


>gi|290559080|gb|EFD92451.1| thiamine biosynthesis protein [Candidatus Parvarchaeum acidophilus
           ARMAN-5]
          Length = 366

 Score = 68.8 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 56/196 (28%), Gaps = 28/196 (14%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVEL 63
           I+ +   + LFSGG DS+      + R   V+ L        +         + KK+ E+
Sbjct: 155 IRSSGKVISLFSGGIDSAIAPIEIMKRGATVDLLHVYALNSPDAALDGKINEIVKKLGEI 214

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
            P  K  L   H   ++ L                         +       L  A  +A
Sbjct: 215 EPGIKLYLVPFHYFSVSSLK------------------INKRYELVMFKRFLLKLAERIA 256

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              G   I         +          + IE    +     + V  P +   K E    
Sbjct: 257 VENGYQAI---------TSGDSLAQVASQTIENINAISYGIDLPVFRPFIGYNKSEIIDK 307

Query: 184 AQDIGGQDLVNLILEE 199
           ++  G  DL     ++
Sbjct: 308 SKKYGLYDLSIEDYKD 323


>gi|219852533|ref|YP_002466965.1| hypothetical protein Mpal_1938 [Methanosphaerula palustris E1-9c]
 gi|219546792|gb|ACL17242.1| thiamine biosynthesis protein [Methanosphaerula palustris E1-9c]
          Length = 212

 Score = 68.8 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 52/187 (27%), Gaps = 24/187 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L SGG DS       + R   +  +  D                 K + L+   + 
Sbjct: 2   KLISLISGGIDSPVATYLMICRGVEIVAVHMD------NRPFTDEKNLDKTLNLVRHLRT 55

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G      +   G              I  N   +        +    A  +A + G  
Sbjct: 56  LTGTPIRTYVVPHG---------PNHTTIARNCNRHLHCLFCRRMMYRIAEQIAEKEGAD 106

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I+ G      +          + ++    +       V  PL+   K E  ++A+ IG 
Sbjct: 107 GILTGESVGQVAS---------QTLQNLSVVNRAIKYPVIRPLIGFDKVEIIEIARTIGT 157

Query: 190 QDLVNLI 196
            ++  L 
Sbjct: 158 YEISTLP 164


>gi|158314657|ref|YP_001507165.1| ExsB family protein [Frankia sp. EAN1pec]
 gi|158110062|gb|ABW12259.1| ExsB family protein [Frankia sp. EAN1pec]
          Length = 372

 Score = 68.8 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 60/216 (27%), Gaps = 44/216 (20%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +LLFS G DS      A     +   L FD G R + +          I  L+ +    +
Sbjct: 132 VLLFSAGLDS----FPAWHYLGKPPALYFDLGHRYRDQERAA------ITALVDRCGIKV 181

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
                L L+                        +  +P RN+   + AA  A R+    +
Sbjct: 182 TVSQELDLSQW-------------------EADDAIIPLRNVYLAMLAANRAERIWCVGV 222

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
                        D        I   I       V + +P   + K E        G   
Sbjct: 223 -------KGDATADKSPQAFHQISQMITDLSGRPVWLDSPFWQMTKTEIVAWYLGQGLPA 275

Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLR 227
                L  + +C      +       C  CP+C  R
Sbjct: 276 G---DLLLTFSC-----SRTDSAMTHCGQCPSCLRR 303


>gi|325846788|ref|ZP_08169703.1| thiamine biosynthesis/tRNA modification protein ThiI [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
 gi|325481546|gb|EGC84587.1| thiamine biosynthesis/tRNA modification protein ThiI [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
          Length = 388

 Score = 68.8 bits (166), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 45/181 (24%), Gaps = 25/181 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS         R  R+  L F                 +K ++L        G+  I  
Sbjct: 189 IDSPVAGFMMAKRGMRINCLHFH------SYPFTSKRALQKAIDLGKILSQYTGKMRI-- 240

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
                   +S     +   I  N   N          +  A  ++ +     ++ G    
Sbjct: 241 --------YSVNMAEIYKSINKNCHRNQTTILSRRFMMRIAEKISEKNNYHALITGESLG 292

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
             +         I              + +  PL+ L K E    A  IG  +      +
Sbjct: 293 QVASQTVESMTVIEDATK---------LPIFKPLIALDKTEIIDRALFIGSYEKSIEPFD 343

Query: 199 E 199
           +
Sbjct: 344 D 344


>gi|227544235|ref|ZP_03974284.1| thiamine-phosphate kinase [Lactobacillus reuteri CF48-3A]
 gi|300908231|ref|ZP_07125697.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           reuteri SD2112]
 gi|227185788|gb|EEI65859.1| thiamine-phosphate kinase [Lactobacillus reuteri CF48-3A]
 gi|300894658|gb|EFK88014.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           reuteri SD2112]
          Length = 406

 Score = 68.8 bits (166), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 50/181 (27%), Gaps = 25/181 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS       + R   +E + F                  K  +L  +     G    + 
Sbjct: 189 IDSPVAAYLGMKRGVSMEMVHFF------SPPYTSPQALAKAKQLTERLAKYSGSIKFIQ 242

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
           +              +   +++       +  +  + L  AA L  +     I  G    
Sbjct: 243 VPFA----------EIQETVKEKVPEGYLMTIQRRMMLRLAAALMIKRHGLAIFNGESLG 292

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
             +                + +   +   V  P++   K E  K+AQDI   DL  L  E
Sbjct: 293 QVASQTMESM---------LAINDVTSYPVLRPVLSFDKTEIIKIAQDIDTYDLSILPYE 343

Query: 199 E 199
           +
Sbjct: 344 D 344


>gi|194468300|ref|ZP_03074286.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           reuteri 100-23]
 gi|194453153|gb|EDX42051.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           reuteri 100-23]
          Length = 406

 Score = 68.8 bits (166), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 50/181 (27%), Gaps = 25/181 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS       + R   +E + F                  K  +L  +     G    + 
Sbjct: 189 IDSPVAAYLGMKRGVSMEMVHFF------SPPYTSPQALAKAKQLTERLAKYSGSIKFIQ 242

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
           +              +   +++       +  +  + L  AA L  +     I  G    
Sbjct: 243 VPFA----------EIQETVKEKVPEGYLMTIQRRMMLRLAAALMIKRHGLAIFNGESLG 292

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
             +                + +   +   V  P++   K E  K+AQDI   DL  L  E
Sbjct: 293 QVASQTMESM---------LAINDVTSYPVLRPVLSFDKTEIIKIAQDIDTYDLSILPYE 343

Query: 199 E 199
           +
Sbjct: 344 D 344


>gi|148543738|ref|YP_001271108.1| thiamine biosynthesis protein ThiI [Lactobacillus reuteri DSM
           20016]
 gi|184153144|ref|YP_001841485.1| thiamine biosynthesis protein ThiI [Lactobacillus reuteri JCM 1112]
 gi|227363282|ref|ZP_03847414.1| thiamine-phosphate kinase [Lactobacillus reuteri MM2-3]
 gi|325682110|ref|ZP_08161628.1| thiamine biosynthesis protein ThiI [Lactobacillus reuteri MM4-1A]
 gi|189030637|sp|A5VIU7|THII_LACRD RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|229558681|sp|B2G6C3|THII_LACRJ RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|148530772|gb|ABQ82771.1| thiamine biosynthesis/tRNA modification protein ThiI [Lactobacillus
           reuteri DSM 20016]
 gi|183224488|dbj|BAG25005.1| thiamine biosynthesis protein ThiI [Lactobacillus reuteri JCM 1112]
 gi|227071738|gb|EEI10029.1| thiamine-phosphate kinase [Lactobacillus reuteri MM2-3]
 gi|290558717|gb|ADD37852.1| thiamine biosynthesis protein ThiI [Lactobacillus reuteri]
 gi|324978754|gb|EGC15703.1| thiamine biosynthesis protein ThiI [Lactobacillus reuteri MM4-1A]
          Length = 406

 Score = 68.8 bits (166), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 50/181 (27%), Gaps = 25/181 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS       + R   +E + F                  K  +L  +     G    + 
Sbjct: 189 IDSPVAAYLGMKRGVSMEMVHFF------SPPYTSPQALAKAKQLTERLAKYSGSIKFIQ 242

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
           +              +   +++       +  +  + L  AA L  +     I  G    
Sbjct: 243 VPFA----------EIQETVKEKVPEGYLMTIQRRMMLRLAAALMIKRHGLAIFNGESLG 292

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
             +                + +   +   V  P++   K E  K+AQDI   DL  L  E
Sbjct: 293 QVASQTMESM---------LAINDVTSYPVLRPVLSFDKTEIIKIAQDIDTYDLSILPYE 343

Query: 199 E 199
           +
Sbjct: 344 D 344


>gi|255036423|ref|YP_003087044.1| tRNA-specific 2-thiouridylase MnmA [Dyadobacter fermentans DSM
           18053]
 gi|254949179|gb|ACT93879.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Dyadobacter fermentans DSM 18053]
          Length = 368

 Score = 68.8 bits (166), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 59/198 (29%), Gaps = 11/198 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIV 61
           + K    L+  SGG DSS       ++   V  ++    DY      + E   C    I 
Sbjct: 1   MSKHGRILVAMSGGIDSSLAAVLLHEQGYEVIGMTMKTWDYASSGGTKKETGCCSLDSIN 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +      +     +IL    +       +  +   +  +   PN  V     I       
Sbjct: 61  DARNIAVELGFPHYILD---IRAEFGDYVIDHFTGEYLEGRTPNPCVLCNTHIKWDALLR 117

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLK 176
            A RL    I  G                              +  ES      PL +L 
Sbjct: 118 RADRLDCEFIATGHYANMQFNNGRHYVSKGIDAWKDQSYVLWGVSQESLARTKLPLGYLH 177

Query: 177 KYETWKLAQDIGGQDLVN 194
           K E  ++A++ G  DLVN
Sbjct: 178 KAEIREMARERGFIDLVN 195


>gi|305663660|ref|YP_003859948.1| thiamine biosynthesis/tRNA modification protein ThiI [Ignisphaera
           aggregans DSM 17230]
 gi|304378229|gb|ADM28068.1| thiamine biosynthesis/tRNA modification protein ThiI [Ignisphaera
           aggregans DSM 17230]
          Length = 409

 Score = 68.4 bits (165), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 25/185 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L L SGG DS     +A+ R   V  + F+ G    V     + V K +V+       
Sbjct: 183 RVLALISGGIDSPVAAWYAMKRGCEVHMVLFNIGGDEHVRGG--VMVAKALVD--RWAYG 238

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              + +I+ +  +             + +         +  R +  L      A ++   
Sbjct: 239 YRPKMYIVDIRPI----------ISRIALYAPEEYMVILLRRYMSRLAEYL--ARKIDAL 286

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + +     +     + +  PL+   K E  ++A+ IG 
Sbjct: 287 AIVTGESLGQVAS---------QTLSNIYVIEEAVTIPILRPLIGFDKDEIVRMARFIGT 337

Query: 190 QDLVN 194
            +   
Sbjct: 338 YEYSI 342


>gi|41407797|ref|NP_960633.1| hypothetical protein MAP1699 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41396151|gb|AAS04016.1| ThiI [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 409

 Score = 68.4 bits (165), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 53/189 (28%), Gaps = 25/189 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A++L SGG DS      A+ R    + L                    K   L+ + 
Sbjct: 182 SGRAVVLLSGGFDSPVAAYRAMRRGLACDFLHC------TGAPFTDASSTYKAYALVRQL 235

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                   +            +        +  +      +  +  ++L  A  LA R+G
Sbjct: 236 TRFQPRCRLYV----------AAVGRAQRTLAASGAGEAQIVAQRRLYLRLACGLAERIG 285

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +                      + + V  PL+   K E    A+ I
Sbjct: 286 AQAVVTGDSLGQVASQTLP---------NLAATEQAATLPVLRPLLGFDKQEILAEARRI 336

Query: 188 GGQDLVNLI 196
           G  ++  L 
Sbjct: 337 GTAEIAMLP 345


>gi|307105483|gb|EFN53732.1| hypothetical protein CHLNCDRAFT_136308 [Chlorella variabilis]
          Length = 274

 Score = 68.4 bits (165), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 66/228 (28%), Gaps = 36/228 (15%)

Query: 5   IKKAP--SALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCV-RKK 59
           +      S ++L SGG +S+  L++         +  L  DYGQ+N  + E       + 
Sbjct: 56  MSAPKQGSTVVLVSGGIESAALLAYWKHWDHAQHLLPLFIDYGQKNVRQEEAAQQAMCRH 115

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +         S+    +           +  T     +  D       +           
Sbjct: 116 LGLDFNAINASMVAHQL-----------NMATVGAGRRYHDPLPHRNLLLLSLAASFAAD 164

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           +  A    I   +       YS         I ++   +       + +  PL+ L+K++
Sbjct: 165 SGAA---NIAICLNKDDLGVYSSASLPFLHHIESLYETLE----PPIQLLMPLLALRKHQ 217

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLR 227
              +         V      +++C  G           C +C  C  R
Sbjct: 218 VITMGHQ------VAAPWHLTYSCAEGGAAP-------CGACEPCRGR 252


>gi|212696206|ref|ZP_03304334.1| hypothetical protein ANHYDRO_00742 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676835|gb|EEB36442.1| hypothetical protein ANHYDRO_00742 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 388

 Score = 68.4 bits (165), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 45/181 (24%), Gaps = 25/181 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS         R  R+  L F                 +K ++L        G+  I  
Sbjct: 189 IDSPVAGFMMAKRGMRINCLHFH------SYPFTSKRALQKAIDLGKILSQYTGKMRI-- 240

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
                   +S     +   I  N   N          +  A  ++ +     ++ G    
Sbjct: 241 --------YSVNMAEIYKSINKNCHRNQTTILSRRFMMRIAEKISEKNNYHALITGESLG 292

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
             +         I              + +  PL+ L K E    A  IG  +      +
Sbjct: 293 QVASQTIESMTVIEDATK---------LPIFKPLIALDKTEIIDRALFIGSYEKSIEPFD 343

Query: 199 E 199
           +
Sbjct: 344 D 344


>gi|170760751|ref|YP_001786568.1| tRNA-specific 2-thiouridylase MnmA [Clostridium botulinum A3 str.
           Loch Maree]
 gi|205810328|sp|B1KZE1|MNMA1_CLOBM RecName: Full=tRNA-specific 2-thiouridylase mnmA 1
 gi|169407740|gb|ACA56151.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum A3 str. Loch Maree]
          Length = 356

 Score = 68.4 bits (165), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 57/211 (27%), Gaps = 12/211 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVELM 64
                L+  SGG DSS       ++   V  ++    Q ++  +E     C    + +  
Sbjct: 1   MKKKVLVGMSGGVDSSVAAYLLKEQGYEVIGVTMQIWQDDEEFIEKEGGCCSLSAVADAR 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     +++        +      +      +   PN  +     I        A 
Sbjct: 61  RVANKIGIPFYVMNFKDAFKRNVIDYFVDE---YMEGRTPNPCITCNKFIKFSSFLDKAM 117

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK-----KYE 179
            +GI  +  G                    +      + +          +      K +
Sbjct: 118 AMGIDYVATGHYAIIEKHNDRYIIKKSEDDKKDQTYALYNLTQFQLERTLMPCGQYKKSK 177

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDK 210
             ++A++IG +       EE   C++   D 
Sbjct: 178 IREIAKEIGLRVHNKKDSEEI--CFIPDNDH 206


>gi|15895501|ref|NP_348850.1| tRNA-specific 2-thiouridylase MnmA [Clostridium acetobutylicum ATCC
           824]
 gi|24638326|sp|Q97GY2|MNMA_CLOAB RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|15025232|gb|AAK80190.1|AE007723_8 TRNA 5-methylaminomethyl-2-thiouridylate)-methyltransferase,
           PP-loop ATPase [Clostridium acetobutylicum ATCC 824]
 gi|325509648|gb|ADZ21284.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium acetobutylicum EA 2018]
          Length = 355

 Score = 68.4 bits (165), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 57/219 (26%), Gaps = 12/219 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVELM 64
                ++  SGG DSS       ++   V  ++      +    E     C    + +  
Sbjct: 1   MNKKVVIGMSGGVDSSVAAYLLKEQGYDVIGVTMKLTPDDAFYTEQEGGCCSLSAVEDAR 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     +++    +                 +   PN  +     I        A 
Sbjct: 61  RVAYRIGIPFYVVNFTDIFKEKVIDYFTEE---YLNGKTPNPCIACNKYIKFDALLKKAE 117

Query: 125 RLGITNIV--IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM---WLKKYE 179
            LG   I         + +G    R       +    +   +   +   LM     KK  
Sbjct: 118 SLGADYIATGHYCRIVEENGRYVIRKSEDEKKDQTYVMYNMTQDQLKHTLMPCGDYKKDR 177

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGC 218
             ++A++IG         EE   C++   D        C
Sbjct: 178 IREIAREIGLNVFDKKDSEEI--CFIPDNDHGGFIKREC 214


>gi|88601389|ref|YP_501567.1| thiamine biosynthesis protein [Methanospirillum hungatei JF-1]
 gi|88186851|gb|ABD39848.1| thiamine biosynthesis protein [Methanospirillum hungatei JF-1]
          Length = 387

 Score = 68.4 bits (165), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 56/181 (30%), Gaps = 23/181 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+ L S G DS       + R  R+  L  + G            +R+ +   +     
Sbjct: 172 KAVALISAGIDSPVAAWLMMRRGVRMIFLHIEPG------KFGGEDIRRNLENNLAALS- 224

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                H +P   L  I+  +     A+           +  R ++ L      A + G  
Sbjct: 225 -----HWVPGLELPVITIPAEPFYQALMTLSEPKLRCVLCKRGMLELASR--YAQKSGCD 277

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I+ G      +          + +     +     + ++ PL+   K E   LA+ IG 
Sbjct: 278 GIITGDNLGQVAT---------QTLHNLAPISAGIEIPIYRPLIGYDKEEIITLARKIGS 328

Query: 190 Q 190
            
Sbjct: 329 F 329


>gi|332667873|ref|YP_004450661.1| tRNA-specific 2-thiouridylase mnmA [Haliscomenobacter hydrossis DSM
           1100]
 gi|332336687|gb|AEE53788.1| tRNA-specific 2-thiouridylase mnmA [Haliscomenobacter hydrossis DSM
           1100]
          Length = 370

 Score = 68.4 bits (165), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 49/198 (24%), Gaps = 11/198 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIV 61
           + K    L+  SGG DS+       +    V  ++    DY      + E   C    I 
Sbjct: 1   MSKLGKVLVAMSGGIDSTVTAMLLHEEGYEVIGITMKTWDYANSGGSKKETGCCSLDSIN 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +             I+ +          +  N   +      PN  V     I       
Sbjct: 61  DAREVAVSMGFHHFIIDIRD---EFGDFVIDNFVEEYIAGRTPNPCVLCNTHIKWNALLK 117

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLK 176
            A  L    I  G                              L  E+      P+    
Sbjct: 118 RANSLDCEFIATGHYAQVKDLNGRKYISKGADPHKDQSYVLWGLSQEALHRTQFPVGKFT 177

Query: 177 KYETWKLAQDIGGQDLVN 194
           K E  ++A D G  +L  
Sbjct: 178 KPEVRQIAFDAGYAELSK 195


>gi|288559751|ref|YP_003423237.1| thiamine biosynthesis ATP pyrophosphatase ThiI [Methanobrevibacter
           ruminantium M1]
 gi|288542461|gb|ADC46345.1| thiamine biosynthesis ATP pyrophosphatase ThiI [Methanobrevibacter
           ruminantium M1]
          Length = 386

 Score = 68.4 bits (165), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 48/187 (25%), Gaps = 23/187 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L S G DS       + R  +V  L  D       E        +   +L+ +   
Sbjct: 181 KVVSLVSSGIDSPVATYLMMKRGCQVIALYCD------NEPYTSPEALQNFNDLIDQLNL 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     +                  +                   A  LA +L   
Sbjct: 235 YA--------SGAPIKRRVVKYGEYLSTCKAEAPDKMTCVLCKSGMYKLAGKLAKKLNAE 286

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++ G      +                +    +  V V +PL+ L K E  ++A+ IG 
Sbjct: 287 AVIDGSSLGQVASQTLP---------NILATREDLDVPVLSPLIGLDKLEITRIAEKIGT 337

Query: 190 QDLVNLI 196
            ++    
Sbjct: 338 FEISKRD 344


>gi|148379169|ref|YP_001253710.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum A str. ATCC 3502]
 gi|153931319|ref|YP_001383546.1| tRNA-specific 2-thiouridylase MnmA [Clostridium botulinum A str.
           ATCC 19397]
 gi|153936775|ref|YP_001387095.1| tRNA-specific 2-thiouridylase MnmA [Clostridium botulinum A str.
           Hall]
 gi|205810260|sp|A7FT69|MNMA1_CLOB1 RecName: Full=tRNA-specific 2-thiouridylase mnmA 1
 gi|205810283|sp|A5I123|MNMA1_CLOBH RecName: Full=tRNA-specific 2-thiouridylase mnmA 1
 gi|148288653|emb|CAL82734.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum A str. ATCC 3502]
 gi|152927363|gb|ABS32863.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum A str. ATCC 19397]
 gi|152932689|gb|ABS38188.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum A str. Hall]
          Length = 356

 Score = 68.4 bits (165), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 57/211 (27%), Gaps = 12/211 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVELM 64
                L+  SGG DSS       ++   V  ++    Q ++  +E     C    + +  
Sbjct: 1   MKKKVLVGMSGGVDSSVAAYLLKEQGYEVIGVTMQIWQDDEEFIEKEGGCCSLSAVADAR 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     +++        +      +      +   PN  +     I        A 
Sbjct: 61  RVANKIGIPFYVMNFKDAFKRNVIDYFVDE---YMEGRTPNPCIACNKFIKFSSFLDKAM 117

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK-----KYE 179
            +GI  +  G                    +      + +          +      K +
Sbjct: 118 AIGIDYVATGHYAIIEKHNDRYIIKKSEDDKKDQTYALYNLTQFQLERTLMPCGQYKKSK 177

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDK 210
             ++A++IG +       EE   C++   D 
Sbjct: 178 IREIAKEIGLRVHNKKDSEEI--CFIPDNDH 206


>gi|300710946|ref|YP_003736760.1| thiamine biosynthesis protein ThiI [Halalkalicoccus jeotgali B3]
 gi|299124629|gb|ADJ14968.1| thiamine biosynthesis protein ThiI [Halalkalicoccus jeotgali B3]
          Length = 388

 Score = 68.0 bits (164), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 52/184 (28%), Gaps = 24/184 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           + L SGG DS       + R   V  L FD+      E    +    + VE         
Sbjct: 185 VALLSGGIDSPVAAWELMKRGAPVIPLYFDF------EAYGGVDHVARAVESARTLAGYA 238

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
                            +     A +  +   P   +  R  + L     LA   G   I
Sbjct: 239 PNHTR--------DLRIAPAGAAAARFVEGIGPTRMLSLRRFM-LRVGERLARETGAVGI 289

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V G      S           A+           + VH PL+   K E    A++IG  +
Sbjct: 290 VTGEAIGQKSSQTSANLAVTDAVAE---------LPVHRPLLTRDKQEIIARAREIGTYE 340

Query: 192 LVNL 195
              +
Sbjct: 341 DSTV 344


>gi|222481179|ref|YP_002567415.1| ExsB family protein [Halorubrum lacusprofundi ATCC 49239]
 gi|222454555|gb|ACM58818.1| ExsB family protein [Halorubrum lacusprofundi ATCC 49239]
          Length = 195

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 71/221 (32%), Gaps = 33/221 (14%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           P ++LL SGG DS+T             T++ DYGQ          C     ++   +  
Sbjct: 2   PESVLLLSGGLDSATLAYTHRPD----LTVTVDYGQ----------CCADAEIQASAQIA 47

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D L  +H +      ++   ++       + D      +   RN + +   A    R G 
Sbjct: 48  DQLNLEHEVIEVDCENLGAGTMAGQQETDLGDAPEWWPY---RNQLVVTLVAMKVVRRGA 104

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +++G    D S            +  ++    E  + V  P +     E         
Sbjct: 105 DRLLVGAVADDQSHADGEAEFFE--LMDSLLSFQEGDLGVVAPAIDRTTEEFV------C 156

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQK 229
             +    +L  +H+C              C  C +C  RQ+
Sbjct: 157 EVNPPESLLGWTHSC--------TASNTACGECRSCKKRQR 189


>gi|254519285|ref|ZP_05131341.1| tRNA-specific 2-thiouridylase mnmA [Clostridium sp. 7_2_43FAA]
 gi|226913034|gb|EEH98235.1| tRNA-specific 2-thiouridylase mnmA [Clostridium sp. 7_2_43FAA]
          Length = 360

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 55/213 (25%), Gaps = 14/213 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETL---SFDYGQRNKVELECRLCVRKKIVEL 63
                ++  SGG DSS       ++   V  +    FD    + +E E   C    + + 
Sbjct: 1   MKKKVVVGMSGGVDSSVAAYLLKEQGYEVIGVTMKHFDDEDEDYIEREGGCCSLSSVEDA 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      ++L      D     +      +  +   PN  +     I        A
Sbjct: 61  RRVADKLGIPFYVLN---FKDSFKEKVIDYFVQEYMEGKTPNPCIACNKHIKFDEFLRRA 117

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLKK 177
             +G   +  G                    +         +           P     K
Sbjct: 118 KGIGADYVATGHYAKIEKNEDGRYLLIKADDDKKDQTYALYNFTQEQLSQTLMPCGDYTK 177

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDK 210
            +  ++A++IG         EE   C++   + 
Sbjct: 178 DKIREIAKEIGLAVHNKKDSEEI--CFIPDNNH 208


>gi|256425783|ref|YP_003126436.1| tRNA-specific 2-thiouridylase MnmA [Chitinophaga pinensis DSM 2588]
 gi|256040691|gb|ACU64235.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Chitinophaga pinensis DSM 2588]
          Length = 366

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 49/196 (25%), Gaps = 11/196 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIV 61
           + +    L+  SGG DS+       ++   V  ++    DY      + E   C      
Sbjct: 1   MSRHGKVLVAMSGGIDSTVTALMLHEQGYEVVGITMKTWDYASAGSSKKETGCCNLDSFN 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +             +L +          +  N   +      PN  V     I       
Sbjct: 61  DARAAAVHHGFPHFVLDIRD---EFGDFVINNFVDEYIAGRTPNPCVLCNTHIKWRALMK 117

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDT-----IRAIETAINLGMESHVTVHTPLMWLK 176
            A  +    I  G                              L  +       PL   +
Sbjct: 118 RADAMDCAFIATGHYAQIREQDGRHILSKGIDDLKDQSYVLWGLQQDVLARTILPLGQYR 177

Query: 177 KYETWKLAQDIGGQDL 192
           K E  ++A D G  +L
Sbjct: 178 KTEIRQMAFDFGYPEL 193


>gi|170755439|ref|YP_001780808.1| tRNA-specific 2-thiouridylase MnmA [Clostridium botulinum B1 str.
           Okra]
 gi|205810574|sp|B1IIY2|MNMA2_CLOBK RecName: Full=tRNA-specific 2-thiouridylase mnmA 2
 gi|169120651|gb|ACA44487.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum B1 str. Okra]
          Length = 356

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 56/211 (26%), Gaps = 12/211 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVELM 64
                L+  SGG DSS       ++   V  ++    Q ++  +E     C    + +  
Sbjct: 1   MKKKVLVGMSGGVDSSVAAYLLKEQGYEVIGVTMQIWQDDEEFIEKEGGCCSLSAVADAR 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     +++        +      +      +   PN  +     I        A 
Sbjct: 61  RVANKIGIPFYVMNFKDAFKRNVIDYFVDE---YMEGRTPNPCIACNKFIKFSSFLDKAM 117

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK-----KYE 179
            +GI  +  G                           + +          +      K +
Sbjct: 118 AMGIDYVATGHYAIIEKHNDRYIIKKSEDDRKDQTYALYNLTQFQLERTLMPCGQYKKSK 177

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDK 210
             ++A++IG +       EE   C++   D 
Sbjct: 178 IREIAKEIGLRVHNKKDSEEI--CFIPDNDH 206


>gi|323477855|gb|ADX83093.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
           islandicus HVE10/4]
          Length = 373

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 53/187 (28%), Gaps = 31/187 (16%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKI-VELMPKW 67
             ++LFSGG DS       + R      L+F+ G   ++  +   L V +K       K 
Sbjct: 172 KTVVLFSGGIDSPVATWMMMKRGSIPVILNFNLGGSVHRKFVLEELSVLRKWSGGHKLKL 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G D ++ L+ +                         +  R +  +           
Sbjct: 232 FIVNGTDVLIKLSQI------------------EKRNRVVMLKRVMYKV----------- 262

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +         +        + + +             +  PL+   K E  +LA+ I
Sbjct: 263 AERLCDKANAKSITTGESLSQVSSQTMTNLYVTEYGIKYPIFRPLIGFDKEEIVELARKI 322

Query: 188 GGQDLVN 194
           G  +   
Sbjct: 323 GTYEYSI 329


>gi|323475123|gb|ADX85729.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
           islandicus REY15A]
          Length = 373

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 53/187 (28%), Gaps = 31/187 (16%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKI-VELMPKW 67
             ++LFSGG DS       + R      L+F+ G   ++  +   L V +K       K 
Sbjct: 172 KTVVLFSGGIDSPVATWMMMKRGSIPVILNFNLGGSVHRKFVLEELSVLRKWSGGHKLKL 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G D ++ L+ +                         +  R +  +           
Sbjct: 232 FIVNGTDVLIKLSQI------------------EKRNRVVMLKRVMYKV----------- 262

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +         +        + + +             +  PL+   K E  +LA+ I
Sbjct: 263 AERLCDKANAKSITTGESLSQVSSQTMTNLYVTEYGIKYPIFRPLIGFDKEEIVELARKI 322

Query: 188 GGQDLVN 194
           G  +   
Sbjct: 323 GTYEYSI 329


>gi|227828032|ref|YP_002829812.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
           islandicus M.14.25]
 gi|259518610|sp|C3MXI0|THII_SULIM RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|227459828|gb|ACP38514.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
           islandicus M.14.25]
          Length = 373

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 53/187 (28%), Gaps = 31/187 (16%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKI-VELMPKW 67
             ++LFSGG DS       + R      L+F+ G   ++  +   L V +K       K 
Sbjct: 172 KTVVLFSGGIDSPVATWMMMKRGSIPVILNFNLGGSVHRKFVLEELSVLRKWSGGHKLKL 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G D ++ L+ +                         +  R +  +           
Sbjct: 232 FIVNGTDVLIKLSQI------------------EKRNRVVMLKRVMYKV----------- 262

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +         +        + + +             +  PL+   K E  +LA+ I
Sbjct: 263 AERLCDKANAKSITTGESLSQVSSQTMTNLYVTEYGIKYPIFRPLIGFDKEEIVELARKI 322

Query: 188 GGQDLVN 194
           G  +   
Sbjct: 323 GTYEYSI 329


>gi|227830769|ref|YP_002832549.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
           islandicus L.S.2.15]
 gi|259518607|sp|C3MR91|THII_SULIL RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|227457217|gb|ACP35904.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
           islandicus L.S.2.15]
          Length = 373

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 53/187 (28%), Gaps = 31/187 (16%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKI-VELMPKW 67
             ++LFSGG DS       + R      L+F+ G   ++  +   L V +K       K 
Sbjct: 172 KTVVLFSGGIDSPVATWMMMKRGSIPVILNFNLGGSVHRKFVLEELSVLRKWSGGHKLKL 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G D ++ L+ +                         +  R +  +           
Sbjct: 232 FIVNGTDVLIKLSQI------------------EKRNRVVMLKRVMYKV----------- 262

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +         +        + + +             +  PL+   K E  +LA+ I
Sbjct: 263 AERLCDKANAKSITTGESLSQVSSQTMTNLYVTEYGIKYPIFRPLIGFDKEEIVELARKI 322

Query: 188 GGQDLVN 194
           G  +   
Sbjct: 323 GTYEYSI 329


>gi|229579665|ref|YP_002838064.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
           islandicus Y.G.57.14]
 gi|229581669|ref|YP_002840068.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
           islandicus Y.N.15.51]
 gi|284998283|ref|YP_003420051.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
           islandicus L.D.8.5]
 gi|259518612|sp|C3NG28|THII_SULIN RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|259518615|sp|C3N7E8|THII_SULIY RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|228010380|gb|ACP46142.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
           islandicus Y.G.57.14]
 gi|228012385|gb|ACP48146.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
           islandicus Y.N.15.51]
 gi|284446179|gb|ADB87681.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
           islandicus L.D.8.5]
          Length = 373

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 53/187 (28%), Gaps = 31/187 (16%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKI-VELMPKW 67
             ++LFSGG DS       + R      L+F+ G   ++  +   L V +K       K 
Sbjct: 172 KTVVLFSGGIDSPVATWMMMKRGSIPVILNFNLGGSVHRKFVLEELSVLRKWSGGHKLKL 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G D ++ L+ +                         +  R +  +           
Sbjct: 232 FIVNGTDVLIKLSQI------------------EKRNRVVMLKRVMYKV----------- 262

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +         +        + + +             +  PL+   K E  +LA+ I
Sbjct: 263 AERLCDKANAKSITTGESLSQVSSQTMTNLYVTEYGIKYPIFRPLIGFDKEEIVELARKI 322

Query: 188 GGQDLVN 194
           G  +   
Sbjct: 323 GTYEYSI 329


>gi|332798405|ref|YP_004459904.1| tRNA-specific 2-thiouridylase mnmA [Tepidanaerobacter sp. Re1]
 gi|332696140|gb|AEE90597.1| tRNA-specific 2-thiouridylase mnmA [Tepidanaerobacter sp. Re1]
          Length = 366

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 67/194 (34%), Gaps = 15/194 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIV 61
           + K   A+ + SGG DSS C     ++   V  ++   FD   R KVE +   C  + + 
Sbjct: 1   MNKNKVAVAM-SGGVDSSVCAYLLKEQGYEVIGITMQIFDDAPR-KVEAKEGGCSSEAVQ 58

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +     +      +++ L    +     + K  A +      PN  +     +       
Sbjct: 59  DARLVAEKLGIPHYVVNLKHCFNEK---VIKYFANEYLSGKTPNPCIVCNKYLKFTELLK 115

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-------ESHVTVHTPLMW 174
            A+ LG   +  G            R+   +++++  +               V  PL  
Sbjct: 116 AAFELGAFYLATGHYARVEYDDTLSRYILKKSVDSDKDQSYVLYGLTQRQLEHVLFPLGN 175

Query: 175 LKKYETWKLAQDIG 188
             K E  ++AQ IG
Sbjct: 176 YTKKEIRQIAQKIG 189


>gi|291453141|ref|ZP_06592531.1| ThiI [Streptomyces albus J1074]
 gi|291356090|gb|EFE82992.1| ThiI [Streptomyces albus J1074]
          Length = 410

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 62/194 (31%), Gaps = 29/194 (14%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  AL+L SGG DS      A+ R  R + + F                  K   L  + 
Sbjct: 180 SGRALVLLSGGYDSPVAAHRAMRRGLRCDFVHF------TGAPYTNAASAFKAYALAREL 233

Query: 68  KDSL--GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 G+ HI+ L                            V G+  + +  A+ LA R
Sbjct: 234 NRYQPPGKLHIVALGHAQKQLAVV------------GAGRFQVVGQRRLMVKAASVLARR 281

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           L    +V G      +          + +     +   + + V  PL+  +K E    A+
Sbjct: 282 LRAQALVTGDALGQVAS---------QTLSNMALVDEAATLPVLRPLIGWEKQEIIDEAR 332

Query: 186 DIGGQDLVNLILEE 199
            +G  ++  L  E+
Sbjct: 333 RVGTAEISVLPDED 346


>gi|239981283|ref|ZP_04703807.1| thiamine biosynthesis protein ThiI [Streptomyces albus J1074]
          Length = 422

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 62/194 (31%), Gaps = 29/194 (14%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  AL+L SGG DS      A+ R  R + + F                  K   L  + 
Sbjct: 192 SGRALVLLSGGYDSPVAAHRAMRRGLRCDFVHF------TGAPYTNAASAFKAYALAREL 245

Query: 68  KDSL--GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 G+ HI+ L                            V G+  + +  A+ LA R
Sbjct: 246 NRYQPPGKLHIVALGHAQKQLAVV------------GAGRFQVVGQRRLMVKAASVLARR 293

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           L    +V G      +          + +     +   + + V  PL+  +K E    A+
Sbjct: 294 LRAQALVTGDALGQVAS---------QTLSNMALVDEAATLPVLRPLIGWEKQEIIDEAR 344

Query: 186 DIGGQDLVNLILEE 199
            +G  ++  L  E+
Sbjct: 345 RVGTAEISVLPDED 358


>gi|322805504|emb|CBZ03068.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum H04402 065]
          Length = 356

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 57/211 (27%), Gaps = 12/211 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVELM 64
                L+  SGG DSS       ++   V  ++    Q ++  +E     C    + +  
Sbjct: 1   MKKKVLVGMSGGVDSSVAAYLLKEQGYEVIGVTMQIWQDDEEFIEKEGGCCSLSAVADAR 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     +++        +      +      +   PN  +     I        A 
Sbjct: 61  RVANKIGIPFYVMNFKDAFKRNVIDYFVDE---YMEGRTPNPCIACNKFIKFSSFLDKAM 117

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK-----KYE 179
            +GI  +  G                    +      + +          +      K +
Sbjct: 118 AMGIDYVATGHYAIIEKHNDRYIIKKSEDDKKDQTYALYNLTQFQLERTLMPCGQYKKSK 177

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDK 210
             ++A++IG +       EE   C++   D 
Sbjct: 178 IREIAKEIGLRVHNKKDSEEI--CFIPDNDH 206


>gi|149198169|ref|ZP_01875216.1| hypothetical protein LNTAR_15947 [Lentisphaera araneosa HTCC2155]
 gi|149138771|gb|EDM27177.1| hypothetical protein LNTAR_15947 [Lentisphaera araneosa HTCC2155]
          Length = 433

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 60/192 (31%), Gaps = 24/192 (12%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS      A+ R   V +++F      +     +  +  K+ +L       
Sbjct: 198 VLCLLSGGIDSPVAAFKAMQRGSHVNSITF------ESFPYTQPELIDKVAKLQTILDKF 251

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                           ++         I+D+            I +  +  +A  L    
Sbjct: 252 QDHP---------AKFYACNMAESQKMIRDDCSERFRTILYRRIMMRVSTVVAEHLKTKA 302

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           ++ G      +       DTI      +         V  PL+ + K E   +A+  G  
Sbjct: 303 LLTGEAVGQVASQTLANMDTINRATNTL---------VLRPLVCMDKNEVIAIAEKAGTF 353

Query: 191 DLVNLILEESHT 202
           D+ N+   +S T
Sbjct: 354 DVSNIQCSDSCT 365


>gi|289432183|ref|YP_003462056.1| hypothetical protein DehalGT_0233 [Dehalococcoides sp. GT]
 gi|288945903|gb|ADC73600.1| conserved hypothetical protein [Dehalococcoides sp. GT]
          Length = 638

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 68/219 (31%), Gaps = 15/219 (6%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++LFSGG DS       L+    V  L     Q     ++ +  + K + +         
Sbjct: 169 VMLFSGGLDSLAGAVELLEDSKDVICLVSH--QSQPGTVKTQNGLFKALKDAYSDRVRHY 226

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
                L   +   +  +  T+          + ++    R  +      +L +      I
Sbjct: 227 QFKCSLVSTVNRAVEETQRTRAFLYTSIAYAIASSQRNPRFYVHENGVTSLNFARRQDGI 286

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
                  +          T+  ++   +L   S V V TP ++  K + ++   ++    
Sbjct: 287 -------NARTSRTTHPRTLSLLQDFFSLVHGSKVQVATPFLFKTKSDIFR---ELSAHK 336

Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
             NLI   + +C         +    C  C  C  R+  
Sbjct: 337 RENLI-PSAVSCSK--TFLNRKQASHCGGCFQCIDRRFA 372


>gi|168178604|ref|ZP_02613268.1| tRNA -methyltransferase [Clostridium botulinum NCTC 2916]
 gi|226948452|ref|YP_002803543.1| tRNA-specific 2-thiouridylase MnmA [Clostridium botulinum A2 str.
           Kyoto]
 gi|182670342|gb|EDT82316.1| tRNA -methyltransferase [Clostridium botulinum NCTC 2916]
 gi|226842334|gb|ACO85000.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum A2 str. Kyoto]
          Length = 356

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 57/211 (27%), Gaps = 12/211 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVELM 64
                L+  SGG DSS       ++   V  ++    Q ++  +E     C    + +  
Sbjct: 1   MKKKVLVGMSGGVDSSVAAYLLKEQGYEVIGVTMQIWQDDEEFIEKEGGCCSLSAVADAR 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     +++        +      +      +   PN  +     I        A 
Sbjct: 61  RVANKIGIPFYVMNFKDAFKRNVIDYFVDE---YMEGRTPNPCIACNKFIKFSSFLDKAM 117

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK-----KYE 179
            +GI  +  G                    +      + +          +      K +
Sbjct: 118 AMGIDYVATGHYAIIEKHNDRYIIKKSEDDKKDQTYALYNLTQFQLERTLMPCGQYKKSK 177

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDK 210
             ++A++IG +       EE   C++   D 
Sbjct: 178 IREIAKEIGLRVHNKKDSEEI--CFIPDNDH 206


>gi|153938615|ref|YP_001390533.1| tRNA-specific 2-thiouridylase MnmA [Clostridium botulinum F str.
           Langeland]
 gi|205810312|sp|A7GCM3|MNMA1_CLOBL RecName: Full=tRNA-specific 2-thiouridylase mnmA 1
 gi|152934511|gb|ABS40009.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum F str. Langeland]
 gi|295318614|gb|ADF98991.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum F str. 230613]
          Length = 356

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 57/211 (27%), Gaps = 12/211 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVELM 64
                L+  SGG DSS       ++   V  ++    Q ++  +E     C    + +  
Sbjct: 1   MKKKVLVGMSGGVDSSVAAYLLKEQGYEVIGVTMQIWQDDEEFIEKEGGCCSLSAVADAR 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     +++        +      +      +   PN  +     I        A 
Sbjct: 61  RVANKIGIPFYVMNFKDAFKRNVIDYFVDE---YMEGRTPNPCIACNKFIKFSSFLDKAM 117

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK-----KYE 179
            +GI  +  G                    +      + +          +      K +
Sbjct: 118 AMGIDYVATGHYAIIEKHNDRYIIKKSEDDKKDQTYALYNLTQFQLERTLMPCGQYKKSK 177

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDK 210
             ++A++IG +       EE   C++   D 
Sbjct: 178 IREIAKEIGLRVHNKKDSEEI--CFIPDNDH 206


>gi|307353181|ref|YP_003894232.1| thiamine biosynthesis/tRNA modification protein ThiI [Methanoplanus
           petrolearius DSM 11571]
 gi|307156414|gb|ADN35794.1| thiamine biosynthesis/tRNA modification protein ThiI [Methanoplanus
           petrolearius DSM 11571]
          Length = 391

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 54/194 (27%), Gaps = 22/194 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L L S G DS      A+ R      + FD G       +    V + +  L   +  
Sbjct: 172 KVLCLLSAGIDSPVAAWLAMSRGCIPGFIYFDGGD--YFGKDTNRAVLENLQNLSRWYPG 229

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           S  E   + +            K      ++       +  R ++ L          G  
Sbjct: 230 STVEAAFIDITPF-------FDKLTDKSAKEALKNRCIICKRFMLRLA---------GKC 273

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +                     A    +   +   + +  PL+   K +T K+A++IG 
Sbjct: 274 ALDWKYLGLVTGNSIGQVASQTLANIGILGSAVPEGIALIEPLITYDKEDTVKIARNIGT 333

Query: 190 QDLVNLILEESHTC 203
                  L    +C
Sbjct: 334 FRENAGDL----SC 343


>gi|222081493|ref|YP_002540856.1| hypothetical protein Arad_7847 [Agrobacterium radiobacter K84]
 gi|221726172|gb|ACM29261.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 457

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/227 (12%), Positives = 57/227 (25%), Gaps = 23/227 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +  FS G DS    +           +    G +                        
Sbjct: 142 KVVTPFSDGLDSRAVTAMMTAGGRSDRLIRVRVGAKTDDRPRTEHRKA------------ 189

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                  +P  +       + +   +   +   L            +V   +    LG +
Sbjct: 190 ---PFLTIPFKVKSGDRPFAESTVRSRGFKFTLLSGIAAYLLGTHDIVMPESGQGALGPS 246

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +       DY  +P         +E  +       V+   P +W  K +T      +  
Sbjct: 247 LVQTSHGYEDYRNHP----LFFGRMERLVAAIFNYQVSYRLPRLWKTKGQTLGEFAALPV 302

Query: 190 QDLVNLILEESHTCYLGKRDKR-YEWGYGCNSCPACYLRQKGWMEFK 235
                +   ++ +C+   R+         C  C AC LR+  +    
Sbjct: 303 NPNEWV---KTRSCWQQNRNSSVDGKRRQCGICAACMLRRLSFHAAG 346


>gi|139439594|ref|ZP_01773007.1| Hypothetical protein COLAER_02034 [Collinsella aerofaciens ATCC
           25986]
 gi|133774935|gb|EBA38755.1| Hypothetical protein COLAER_02034 [Collinsella aerofaciens ATCC
           25986]
          Length = 414

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 55/184 (29%), Gaps = 25/184 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L S G DS         R      + F    R +        V+  I  L P    
Sbjct: 178 KVVTLLSSGIDSPVATWMLARRGAVCVPVHFS--GRPQTPDTSEYLVQDIIRALEPGV-- 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G  +++P          +   N+             V     I    A  +A+  G  
Sbjct: 234 QIGRLYVVPFGDCQREISVTCPSNL------------RVIMYRRIMYSVAERIAHIEGAK 281

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + +E  + +     + V  PL+   K E    A++IG 
Sbjct: 282 AIVTGESLGQVAS---------QTLENIMAVNEAVKIPVFRPLIGSDKQEIIARAEEIGT 332

Query: 190 QDLV 193
            D+ 
Sbjct: 333 FDIS 336


>gi|315651065|ref|ZP_07904099.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
 gi|315486655|gb|EFU77003.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
          Length = 452

 Score = 68.0 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/231 (11%), Positives = 56/231 (24%), Gaps = 27/231 (11%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            + LFSGG DS       L        +  +       E      ++++      +   S
Sbjct: 143 CVSLFSGGLDSYCGAIKLLQEGHSPVLVGHN-------EYPKLRYIQERFCNNFNECYPS 195

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG--- 127
                +         + +          +  N             +  A  +  ++    
Sbjct: 196 QKSLFL----GFTAGARTPFRLEGERLRKSENTSRGRSLLFLCAAISVAGIMGEQIPVYI 251

Query: 128 -----ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
                I   V        S      H         +   +     +     +  K E   
Sbjct: 252 PENGFIGLNVALTNSRKGSCSTRTTHPYFLNSLNKLIASVGIQNRIFNFFAFKTKREIVN 311

Query: 183 LAQDIGGQDLVNLILEESHTCYLG-----KRDKRYEWGYGCNSCPACYLRQ 228
           L   + G +      +++ +C         R    ++   C  C  C +R+
Sbjct: 312 L---VSGTEAFKQGYKDTISCSHPCVSRYNRVGSRDYPVNCGFCYPCIIRK 359


>gi|332297616|ref|YP_004439538.1| tRNA sulfurtransferase [Treponema brennaborense DSM 12168]
 gi|332180719|gb|AEE16407.1| tRNA sulfurtransferase [Treponema brennaborense DSM 12168]
          Length = 398

 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 53/180 (29%), Gaps = 25/180 (13%)

Query: 20  DSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPL 79
           DS       + R  +V+ + F                ++K+ +L         + HI  +
Sbjct: 188 DSPVAGYRMMRRGMKVDCVYFH------AYPYTSAEAQQKVEDLARIIAQYGVDTHINII 241

Query: 80  AILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETD 139
                        +V M+I++            +  +  A  LA R+    ++ G     
Sbjct: 242 PF----------TDVQMRIKERAPEAFSTLLLRMCMMSAANLLADRIRADCLISGESLGQ 291

Query: 140 YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEE 199
            +           +              +  PL+ L K E    A+ IG  +   L  E+
Sbjct: 292 VASQTIQNMTVTESA---------CAYPLLRPLVGLDKEEIIATAKYIGTYETSILPYED 342


>gi|237794471|ref|YP_002862023.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum Ba4 str. 657]
 gi|229260617|gb|ACQ51650.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum Ba4 str. 657]
          Length = 356

 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 57/211 (27%), Gaps = 12/211 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVELM 64
                L+  SGG DSS       ++   V  ++    Q ++  +E     C    + +  
Sbjct: 1   MKKKVLVGMSGGVDSSVAAYLLKEQGYEVIGVTMQIWQDDEEFIEKEGGCCSLSAVADAR 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     +++        +      +      +   PN  +     I        A 
Sbjct: 61  RVANKIGIPFYVMNFKDAFKRNVIDYFVDE---YMEGRTPNPCIACNKFIKFSSFLDKAM 117

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK-----KYE 179
            +GI  +  G                    +      + +          +      K +
Sbjct: 118 AMGIDYVATGHYAIIKKHNDRYIIKKSEDDKKDQTYALYNLTQFQLERTLMPCGQYKKSK 177

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDK 210
             ++A++IG +       EE   C++   D 
Sbjct: 178 IREIAKEIGLRVHNKKDSEEI--CFIPDNDH 206


>gi|297526365|ref|YP_003668389.1| Thiamine biosynthesis protein-like protein [Staphylothermus
           hellenicus DSM 12710]
 gi|297255281|gb|ADI31490.1| Thiamine biosynthesis protein-like protein [Staphylothermus
           hellenicus DSM 12710]
          Length = 375

 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 57/183 (31%), Gaps = 24/183 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++L SGG DSS    +AL R  R+  +  D G             RK+  E +    + +
Sbjct: 168 VVLLSGGVDSSLAAWYALKRGTRIIPVFIDLG------KYWSEQARKRFYESISLIYEWV 221

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
             D I             +     +    N                 A+ +A +     I
Sbjct: 222 PWDKI---------KFYIVRGAEKIVESANIPARLRCLLCKANMYRIASIIADKEKCLGI 272

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V G      +          + +     L   S   V+ P+ ++ K E  + A+ +G   
Sbjct: 273 VTGEAVGQVAS---------QTLRNLYILSRLSPKPVYRPVAFMDKLEIIEQARKLGFHI 323

Query: 192 LVN 194
           L  
Sbjct: 324 LSR 326


>gi|168183036|ref|ZP_02617700.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum Bf]
 gi|182673881|gb|EDT85842.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum Bf]
          Length = 356

 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 57/211 (27%), Gaps = 12/211 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVELM 64
                L+  SGG DSS       ++   V  ++    Q ++  +E     C    + +  
Sbjct: 1   MKKKVLVGMSGGVDSSVAAYLLKEQGYEVIGVTMQIWQDDEEFIEKEGGCCSLSAVADAR 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     +++        +      +      +   PN  +     I        A 
Sbjct: 61  RVANKIGIPFYVMNFKDAFKRNVIDYFVDE---YMEGRTPNPCIACNKFIKFSSFLDKAM 117

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK-----KYE 179
            +GI  +  G                    +      + +          +      K +
Sbjct: 118 AMGIDYVATGHYAIIKKHNDRYIIKKSEDDKKDQTYALYNLTQFQLERTLMPCGQYKKSK 177

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDK 210
             ++A++IG +       EE   C++   D 
Sbjct: 178 IREIAKEIGLRVHNKKDSEEI--CFIPDNDH 206


>gi|114777820|ref|ZP_01452751.1| hypothetical protein SPV1_00190 [Mariprofundus ferrooxydans PV-1]
 gi|114551811|gb|EAU54351.1| hypothetical protein SPV1_00190 [Mariprofundus ferrooxydans PV-1]
          Length = 392

 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 56/191 (29%), Gaps = 27/191 (14%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++LFSGG DS       + R   V  +         +          KI +L  +     
Sbjct: 181 VVLFSGGIDSPVAAYSMMKRGMEVVLVH--------LYNSTINRDFAKIRDLARQLSLYQ 232

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G   +  + +          +               +       +  AA +A   G   +
Sbjct: 233 GRLTLHMIDL----------EEFQRHAIAKVDAEYRMIIYKRQMIRSAAAIAADAGAQAL 282

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V G      +          + +     +   S + + +PL+   K E   LA+ IG  +
Sbjct: 283 VTGDSLGQVAS---------QTLANIHAIYDASDLPLLSPLIAWDKEEIIALAKRIGTYE 333

Query: 192 LVNLILEESHT 202
           +      +  +
Sbjct: 334 ISIEEYCDICS 344


>gi|293364053|ref|ZP_06610789.1| thiamine biosynthesis/tRNA modification protein ThiI [Mycoplasma
           alligatoris A21JP2]
 gi|292552543|gb|EFF41317.1| thiamine biosynthesis/tRNA modification protein ThiI [Mycoplasma
           alligatoris A21JP2]
          Length = 380

 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 60/193 (31%), Gaps = 25/193 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   L L SGG DS       + R  +V+ LSF          +       KI  L    
Sbjct: 164 SGKVLHLMSGGIDSPVAAFMLMKRGLKVDYLSF------ITPPQTDEKTVNKIKRLSGTL 217

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                   IL L     + +        + +  N      +  R+   +           
Sbjct: 218 NKYQITS-ILNLGNYSKLMNY-------LAMTSNQAYKITLMRRSFYRI----------- 258

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +         S   +      + +E+   +G  +++ +  PL+   K ET K+A+ I
Sbjct: 259 AQKVAQKHNYLALSNGDNLGQVASQTLESLSTIGYSTNMQIFRPLLCFDKEETIKIAKKI 318

Query: 188 GGQDLVNLILEES 200
              D+      E+
Sbjct: 319 DTYDISIEKANET 331


>gi|119715335|ref|YP_922300.1| ExsB family protein [Nocardioides sp. JS614]
 gi|119535996|gb|ABL80613.1| preQ(0) biosynthesis protein QueC [Nocardioides sp. JS614]
          Length = 183

 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 68/233 (29%), Gaps = 51/233 (21%)

Query: 5   IKKAPSAL-LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +K+  + + +L SGG DS+  L+   +R     ++  DYGQ                   
Sbjct: 1   MKRPATDICVLLSGGVDSALVLAMLSNR--SPVSVWVDYGQPVADVERQASRAIA----- 53

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                              G      + K +A       L                   A
Sbjct: 54  ----------------NHFGSPWMEVVIKGLAPPASGEFLGR-----------NDLLVAA 86

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
                    + +     +GY DC      + +  ++        +  PL  L K + ++L
Sbjct: 87  ALSVAGGGFVAIGTHAGTGYADCSLAWAGSWQALLDAQHGGTAGLLAPLSNLDKAQVYEL 146

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKE 236
           A   G      + +E +H+C              C SC +C  R+   ++   
Sbjct: 147 AVANG------VPIELTHSC--------ETTAAPCGSCSSCADRR--LLDAGA 183


>gi|313889234|ref|ZP_07822888.1| thiamine biosynthesis/tRNA modification protein ThiI [Peptoniphilus
           harei ACS-146-V-Sch2b]
 gi|312844788|gb|EFR32195.1| thiamine biosynthesis/tRNA modification protein ThiI [Peptoniphilus
           harei ACS-146-V-Sch2b]
          Length = 393

 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 51/181 (28%), Gaps = 25/181 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS         R   V+ L F                 +K+ +L     +  GE     
Sbjct: 188 IDSPVAGFLMAKRGVLVDCLHFH------SYPFTSERAEEKVKKLAEDISNFSGELTFYS 241

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
           + IL          ++  +I  N   +          +  A  +A   G   I+ G    
Sbjct: 242 VNIL----------DIQKEININCPEDEMTIISRRFMMRVADKIARDNGYDCIITGENLG 291

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
             +           AI   I         V  PL+ + K     +A+DI   +   L  E
Sbjct: 292 QVASQTIDGLKVTDAITDKI---------VFRPLIGMDKVNIIDIAKDIDTYETSILPYE 342

Query: 199 E 199
           +
Sbjct: 343 D 343


>gi|15897271|ref|NP_341876.1| thiamine biosynthesis protein thiI (thiI) [Sulfolobus solfataricus
           P2]
 gi|284174521|ref|ZP_06388490.1| thiamine biosynthesis protein thiI (thiI) [Sulfolobus solfataricus
           98/2]
 gi|20140721|sp|Q980G6|THII_SULSO RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|13813478|gb|AAK40666.1| Thiamine biosynthesis protein thiI (thiI) [Sulfolobus solfataricus
           P2]
 gi|261601941|gb|ACX91544.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
           solfataricus 98/2]
          Length = 371

 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 47/185 (25%), Gaps = 27/185 (14%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++LFSGG DS       + R      L+F+ G     EL     V K++  L      
Sbjct: 170 KTVVLFSGGIDSPVATWMMMKRGSVPIILNFNLGGDLHKEL-----VLKELNMLKRWSGG 224

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              +  I+             T       Q        +  R +                
Sbjct: 225 HKLKIFIVK-----------GTDVFIKLSQVERRSRVVMLKRVMYKT-----------AE 262

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +         +        + + +             +  PL+   K E   +A+ IG 
Sbjct: 263 KLCEKTNAKSITTGESLSQVSSQTMANLYVTEYGIKYPIFRPLIGFDKEEIVDIARKIGT 322

Query: 190 QDLVN 194
                
Sbjct: 323 YKHSI 327


>gi|229585301|ref|YP_002843803.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
           islandicus M.16.27]
 gi|259518596|sp|C3MZC6|THII_SULIA RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|228020351|gb|ACP55758.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
           islandicus M.16.27]
          Length = 373

 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 53/187 (28%), Gaps = 31/187 (16%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKI-VELMPKW 67
             ++LFSGG DS       + R      L+F+ G   ++  +   L V +K       K 
Sbjct: 172 KTVVLFSGGIDSPVATWMMMKRGSIPVILNFNLGGSVHRKFVLEELSVLRKWSGGHKLKL 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G D ++ L+ +                         +  R +  +           
Sbjct: 232 FIVNGTDVLIKLSQI------------------EKRNRVVMLKRVMYKV----------- 262

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +         +        + + +             +  PL+   K E  +LA+ I
Sbjct: 263 AERLCDKANVKSITTGESLSQVSSQTMTNLYVTEYGIKYPIFRPLIGFDKEEIVELARKI 322

Query: 188 GGQDLVN 194
           G  +   
Sbjct: 323 GTYEYSI 329


>gi|70608041|ref|YP_256911.1| thiamine biosynthesis protein [Sulfolobus acidocaldarius DSM 639]
 gi|76363448|sp|Q4J6G3|THII_SULAC RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|68568689|gb|AAY81618.1| thiamine biosynthesis protein [Sulfolobus acidocaldarius DSM 639]
          Length = 369

 Score = 67.6 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 64/184 (34%), Gaps = 27/184 (14%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++LFSGG DS       + R  R   L+F+ G +       +  +  K V+++ +W  
Sbjct: 168 KTVVLFSGGFDSPVATWMLMKRGVRPILLNFELGGK------VQRDLVLKEVDVLKQWSS 221

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +      + +  +  +  +S   N          P+  +     I    A  LA +L   
Sbjct: 222 NND----INVYFINGLDVTSKLVNAE--------PSLRILLLKRIMYNTARVLANKLRAY 269

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
           +I  G   +  S                     +  + V  PL+   K E  ++++ IG 
Sbjct: 270 SITTGESLSQVSSQTMI---------NLYVTEYDIDLPVFRPLIGFDKEEIIQMSRKIGT 320

Query: 190 QDLV 193
            +  
Sbjct: 321 FEYS 324


>gi|158522149|ref|YP_001530019.1| hypothetical protein Dole_2138 [Desulfococcus oleovorans Hxd3]
 gi|158510975|gb|ABW67942.1| hypothetical protein Dole_2138 [Desulfococcus oleovorans Hxd3]
          Length = 207

 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/223 (12%), Positives = 62/223 (27%), Gaps = 26/223 (11%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +    L ++SGG DS   L   L         L       +   +E R     K ++ 
Sbjct: 1   MVQEKKILCMYSGGLDSLGVLYRLLTEPEYADFGLHVH--HMHLKNVENRALAESKAIQA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
             ++    G           +  ++    + +   +       +        +   +++ 
Sbjct: 59  TFRYFREKG---------YRNFLYTESGHDYSFMRRYFTFDTYWYAFMAANIITADSSIM 109

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           +      +     + + +G     +         + L +    +   P+  L K   W +
Sbjct: 110 HV----AVGRTKSDMESAGSRMNANRGHEIFHATLPLELRFDRSYIYPVAHLTKQAVWNM 165

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYL 226
                   L   + E S +C         +    C  CP C  
Sbjct: 166 --------LPADLRELSWSCRKPV--ISDKEPRPCGKCPTCQE 198


>gi|15829189|ref|NP_326549.1| thiamine biosynthesis protein ThiI [Mycoplasma pulmonis UAB CTIP]
 gi|20140729|sp|Q98PK4|THII_MYCPU RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|14090133|emb|CAC13891.1| PROBABLE THIAMINE BIOSYNTHESIS PROTEIN THII [Mycoplasma pulmonis]
          Length = 379

 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 64/199 (32%), Gaps = 27/199 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +  +  +L L SGG DS       + R  +VE L+F                  K++ L 
Sbjct: 166 VSSSGKSLHLLSGGIDSPVAAIELMKRGIKVEFLAF------VTPPHTDEKTVNKLMMLK 219

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             +     +  I  +     +++ SL  + +            +  R+   +        
Sbjct: 220 DVFNKFQHDSKIHLVNYTKIMNYISLISDQS--------YKIALMRRSFYRIADKIAKRK 271

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++              S   +      + IE+ I +  ++++ +  PL+   K +   L 
Sbjct: 272 KIMAI-----------SNGENLGQVASQTIESMICISSQTNLLIFRPLLAWNKVDIINLG 320

Query: 185 QDIGGQDLVNLILEESHTC 203
           Q      +  +   E  +C
Sbjct: 321 QKYKTYQISTIPASE--SC 337


>gi|294777977|ref|ZP_06743412.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
 gi|294448186|gb|EFG16751.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
          Length = 445

 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 61/231 (26%), Gaps = 27/231 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR---FDRVETLSFD--YGQRNKVELECRLCVRKKIVELM 64
           +A+ LFSGG DS       +             +D         + +  L  RKK     
Sbjct: 143 TAVSLFSGGLDSLIGAIDYMTNNPSGKIFLASHYDSYMTGPKSDQEKIDLRFRKKFAGRY 202

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L E  I           S +   +A  I      +  +P    + L        
Sbjct: 203 LHLPAVLIEPSISEETSCRS--RSLMFIAIAQIIASYAQCDVTIPENGSVSLN------- 253

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                           S      H         +   +     +  P + + K E  +  
Sbjct: 254 -------FPLSPSRRASCSTRTTHPLFLKQLQKLIHSLGLQPCLINPYVKMTKGEMVQSC 306

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKR---YEWGYGCNSCPACYLRQKGWM 232
            D   +D +  I+ ES++C      +          C  C  C  R+   +
Sbjct: 307 SD---KDYLLQIVTESNSCGKRNMHQHMYDNRQATHCGHCMPCMYRKASLI 354


>gi|256545134|ref|ZP_05472500.1| thiamine biosynthesis protein ThiI [Anaerococcus vaginalis ATCC
           51170]
 gi|256399175|gb|EEU12786.1| thiamine biosynthesis protein ThiI [Anaerococcus vaginalis ATCC
           51170]
          Length = 388

 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 45/181 (24%), Gaps = 25/181 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS         R  R+  L F                 +K ++L        G+  I  
Sbjct: 189 IDSPVAGFMMAKRGMRINCLHFH------SYPFTSKRALQKAIDLGKILSQYTGKMRI-- 240

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
                   +S     +   I  N   N          +  A  ++ +     ++ G    
Sbjct: 241 --------YSVNMAEIYKAINKNCHRNQTTILSRRFMMRIAEKISEKNSYDALITGESLG 292

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
             +         I              + +  PL+ L K E    A  IG  +      +
Sbjct: 293 QVASQTVESMTVIEDATK---------LPIFKPLIALDKTEIIDRALFIGSYEKSIEPYD 343

Query: 199 E 199
           +
Sbjct: 344 D 344


>gi|18314053|ref|NP_560720.1| thiamine biosynthesis protein ThiI [Pyrobaculum aerophilum str.
           IM2]
 gi|20140633|sp|Q8ZT61|THII_PYRAE RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|18161633|gb|AAL64902.1| thiamine biosynthesis protein (thiI), probable [Pyrobaculum
           aerophilum str. IM2]
          Length = 484

 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 65/224 (29%), Gaps = 45/224 (20%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L L S G DS       + R   V+ L  + G    + L   L V K++         
Sbjct: 172 KVLALVSAGIDSPVAAWMLMRRGAHVDVLYCNLGG--TITLRHALEVIKRL------LAW 223

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           S G +  + +A  G          VA  ++       +              +A RLG  
Sbjct: 224 SYGYNARVIIADCG---------PVARAMRRGVREELWNIAFKRALYRIGVEIAKRLGAI 274

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +  G      S         + A            + +  PL+ + K E  K AQ IG 
Sbjct: 275 ALATGESLGQVSSQTLQALAAVEA---------GIDMPILRPLIGMDKDEIVKHAQKIGT 325

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWME 233
            +L   + E     Y     +R               R+    E
Sbjct: 326 YELSAKLPE-----YCAVFSRRP--------------RKWALRE 350


>gi|289423552|ref|ZP_06425353.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Peptostreptococcus anaerobius 653-L]
 gi|289156054|gb|EFD04718.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Peptostreptococcus anaerobius 653-L]
          Length = 350

 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 57/191 (29%), Gaps = 22/191 (11%)

Query: 7   KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-KVELECRLCVRKKIVELM 64
                +LL  SGG DSS            V  ++     R  + ++E  + V +K+    
Sbjct: 1   MTKKKVLLGMSGGVDSSVAAYLLKKEGYDVVGVNMKLWDRPDEKDVEDAISVCEKLD--- 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     H++    L       + +N   + +  + PN  V     I        A 
Sbjct: 58  -------IPFHVID---LQKEFKGKVIENFIKEYEAGHTPNPCVFCNKNIKFGDLFKKAE 107

Query: 125 RLGITNIVIGVCETDYSGY-------PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
            LG   I  G                    +          NL  E    +  P+    K
Sbjct: 108 ELGCDYIATGHYALIEYNEEKGIYELKKASNSNKDQTYVMYNLSQEKLSKILFPIGKYNK 167

Query: 178 YETWKLAQDIG 188
            +  ++A++IG
Sbjct: 168 DQIREMAKEIG 178


>gi|228947430|ref|ZP_04109721.1| hypothetical protein bthur0007_35590 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228812283|gb|EEM58613.1| hypothetical protein bthur0007_35590 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
          Length = 211

 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 43/119 (36%), Gaps = 9/119 (7%)

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I+  +        S      H     +   +   ++ +V+++ P  +  K E  +  ++I
Sbjct: 27  ISLNIPLTNSRLGSSSTRTTHPYYMRLLQRLINNLKINVSINNPYQFKTKGEMIQECRNI 86

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGY--GCNSCPACYLRQ----KGWMEFKEKYQD 240
              + +   L  + +C    + +         C  C  C +R+    K  +E   +Y+D
Sbjct: 87  ---EFLKENLNYTMSCSHPDQGRMDGETETLHCGYCLPCVIRRASILKAEIEDGSRYRD 142


>gi|255532078|ref|YP_003092450.1| tRNA-specific 2-thiouridylase MnmA [Pedobacter heparinus DSM 2366]
 gi|255345062|gb|ACU04388.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pedobacter heparinus DSM 2366]
          Length = 363

 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 54/194 (27%), Gaps = 6/194 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIV 61
           + K    L+  SGG DSS       ++   V  L+    DY        E   C    I 
Sbjct: 1   MSKKGRILVAMSGGVDSSVAAVMLHEQGYEVIGLTMKTWDYATSGSSSKETGCCSLDSIN 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +      +     +IL +             +  +  +  N             L+  A 
Sbjct: 61  DARTLAVNYGFPHYILDIRDEFGDFVIDNFVDEYLAGRTPNPCVLCNTHIKWEALLKRAN 120

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL---GMESHVTVHTPLMWLKKY 178
                 I            SG            + +  L     E+      PL    K 
Sbjct: 121 KLDCEFIATGHYANIRQQDSGRYVISKGKDENKDQSYVLWGVSQENLSRTQFPLGSFAKS 180

Query: 179 ETWKLAQDIGGQDL 192
           E  ++A D+G ++L
Sbjct: 181 EIRQMALDMGQEEL 194


>gi|238620262|ref|YP_002915088.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
           islandicus M.16.4]
 gi|259518604|sp|C4KIK6|THII_SULIK RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|238381332|gb|ACR42420.1| thiamine biosynthesis/tRNA modification protein ThiI [Sulfolobus
           islandicus M.16.4]
          Length = 373

 Score = 67.2 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 52/187 (27%), Gaps = 31/187 (16%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKI-VELMPKW 67
             ++LFSGG DS       + R      L+F+ G   ++  +   L V +K       K 
Sbjct: 172 KTVVLFSGGIDSPVATWMMMKRGSIPVILNFNLGGSIHRKFVLEELSVLRKWSGGHKLKL 231

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G D ++ L+ +                         +  R +  +           
Sbjct: 232 FIVNGTDVLIKLSQI------------------EKRNRVVMLKRVMYKV----------- 262

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +         +        + + +             +  PL+   K E  +LA+ I
Sbjct: 263 AERLCDKANAKSITTGESLSQVSSQTMTNLYVTEYGIKYPIFRPLIGFDKEEIVELARKI 322

Query: 188 GGQDLVN 194
           G      
Sbjct: 323 GTYQYSI 329


>gi|326791915|ref|YP_004309736.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium lentocellum DSM 5427]
 gi|326542679|gb|ADZ84538.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium lentocellum DSM 5427]
          Length = 360

 Score = 66.9 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 59/199 (29%), Gaps = 19/199 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL---------- 50
           M++  K     ++  SGG DSS       ++   V  ++    Q    E           
Sbjct: 1   MSETTK--KKVVVGMSGGVDSSVTAYLLKEQGYEVIGMTMQIWQEGAPEDSDGGCCGLSA 58

Query: 51  -ECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
            +    V +K+ ++     +   +     +    D   ++ T N  +         + + 
Sbjct: 59  VDDARRVCQKL-DIPHYVVNFRSDFKKHVIDYFLDEYQNARTPNPCIACNRYVKWESMLQ 117

Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
               I   + AT  Y   I + V G      S                 NL         
Sbjct: 118 KALQIGADYIATGHYARVIRDEVTGRYSLKQSKT-----LAKDQTYALYNLTQHQLAHTL 172

Query: 170 TPLMWLKKYETWKLAQDIG 188
            PL    K E   +A++IG
Sbjct: 173 MPLGDYTKDEVRAIAKEIG 191


>gi|91783999|ref|YP_559205.1| hypothetical protein Bxe_A1806 [Burkholderia xenovorans LB400]
 gi|91687953|gb|ABE31153.1| hypothetical protein Bxe_A1806 [Burkholderia xenovorans LB400]
          Length = 458

 Score = 66.9 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 64/229 (27%), Gaps = 29/229 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  +  + +S G DS             V  LS D G          LC+R        K
Sbjct: 144 KTKTFAVAYSNGLDS-----------RAVSALSGDEG--------EALCIRVAGNRQPRK 184

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             DS        ++       S  ++                  R ++            
Sbjct: 185 DGDSYFTHIPFNISGYRGNESSFRSRGFQFAAVTAIAAQLSNVTRIVVPESGQ------- 237

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G    V+      Y+ Y +      + +E  I       V    P +W  K +T      
Sbjct: 238 GALGPVLLPLYGVYADYRNYPTFFRK-MERFIKALQGYQVRFEQPRLWFTKGQTLSAFLR 296

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           I G+      L+ + +C+  +R         C  C AC LR+       
Sbjct: 297 IPGK--SGEHLKSTRSCWQTRRVVNVGSRKQCGLCAACLLRRLSLHAAG 343


>gi|256810712|ref|YP_003128081.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Methanocaldococcus fervens AG86]
 gi|256793912|gb|ACV24581.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Methanocaldococcus fervens AG86]
          Length = 373

 Score = 66.9 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 52/184 (28%), Gaps = 25/184 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L L S G DS       + R  R   L           L+       K   +     D
Sbjct: 182 RVLCLVSDGIDSPVAAFMMIRRGCRDVLLH----------LKMSEEGLNKARRIAEVLSD 231

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E   +          ++  K++  K++     N          L  A   A  L   
Sbjct: 232 YDTELEFVVYDY------TNDIKDIVEKLKSIKKENYTCIFCKRRMLKVAEKYAKYLDCD 285

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +                  +    +  +  PL+ L K +  ++A++IG 
Sbjct: 286 AIVTGDNLGQVASQTLK---------NLRVISEGINYPILRPLIGLDKNDIVEIAKEIGT 336

Query: 190 QDLV 193
            ++ 
Sbjct: 337 YEIS 340


>gi|302389695|ref|YP_003825516.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermosediminibacter oceani DSM 16646]
 gi|302200323|gb|ADL07893.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermosediminibacter oceani DSM 16646]
          Length = 364

 Score = 66.9 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 59/196 (30%), Gaps = 11/196 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +       ++  SGG DSSTC      +   V  ++    Q    +   R      I  +
Sbjct: 1   MSLNKNRVVVAMSGGVDSSTCAYLLKKQGYEVIGITMQIWQDPSEDYTYREGGCCSIGAV 60

Query: 64  --MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
               K  + LG  + +      +  +  + +    +      PN  +     I       
Sbjct: 61  YDARKVAEKLGIPYYV--LNFKEEFNQKVIEYFIEEYLRGRTPNPCIACNRYIKFEALLQ 118

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-------TVHTPLMW 174
            A  +    +  G            R+   +A++ + +     +         +  PL +
Sbjct: 119 KAMEVDAYYLATGHYARIEYDSASGRYLLKKAVDKSKDQSYALYNLTQGQLEHLIMPLGY 178

Query: 175 LKKYETWKLAQDIGGQ 190
             K +   +A++ G  
Sbjct: 179 FTKSQIRDIAKEAGLP 194


>gi|294508524|ref|YP_003572583.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1
           [Salinibacter ruber M8]
 gi|294344853|emb|CBH25631.1| Probable tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           1 [Salinibacter ruber M8]
          Length = 383

 Score = 66.5 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 60/205 (29%), Gaps = 18/205 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DY---GQRNKVELECRLCVRK 58
           + K    L+  SGG DSS       +R   V  L+    DY   G R+  E+ C  C  +
Sbjct: 1   MSKKGRVLVAMSGGVDSSVTAVLLKERGYDVVGLTMKTWDYSTSGGRDGKEVGC--CSIE 58

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
            + +      +      ++    L +     + +    +      PN  V     I    
Sbjct: 59  SMNDARVVATEHGFPHFVVD---LREEFGDWVIERFTDEYLSGRTPNPCVLCNTHIKWDA 115

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTP 171
               A  L    I  G            R+                  L  E       P
Sbjct: 116 LLQRADDLDCEYIATGHYANVRYDDERDRYLLSRGLDRNKDQSYALWGLPQEHLARSIFP 175

Query: 172 LMWLKKYETWKLAQDIGGQDLVNLI 196
           L   +K E  ++A + G  ++ +  
Sbjct: 176 LGAYEKPEIREMAAEFGLDNVADKP 200


>gi|83816248|ref|YP_446592.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salinibacter ruber DSM 13855]
 gi|123528021|sp|Q2RZN9|MNMA_SALRD RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|83757642|gb|ABC45755.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salinibacter ruber DSM 13855]
          Length = 383

 Score = 66.5 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 60/205 (29%), Gaps = 18/205 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DY---GQRNKVELECRLCVRK 58
           + K    L+  SGG DSS       +R   V  L+    DY   G R+  E+ C  C  +
Sbjct: 1   MSKKGRVLVAMSGGVDSSVTAVLLKERGYDVVGLTMKTWDYSTSGGRDGKEVGC--CSIE 58

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
            + +      +      ++    L +     + +    +      PN  V     I    
Sbjct: 59  SMNDARVVATEHGFPHFVVD---LREEFGDWVIERFTDEYLSGRTPNPCVLCNTHIKWDA 115

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTP 171
               A  L    I  G            R+                  L  E       P
Sbjct: 116 LLQRADDLDCEYIATGHYANVRYDDERDRYLLSRGLDRNKDQSYALWGLPQEHLARSIFP 175

Query: 172 LMWLKKYETWKLAQDIGGQDLVNLI 196
           L   +K E  ++A + G  ++ +  
Sbjct: 176 LGAYEKPEIREMAAEFGLDNVADKP 200


>gi|297181386|gb|ADI17576.1| predicted tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase, contains the PP-loop ATPase
           domain-protein [uncultured alpha proteobacterium
           HF0130_06E21]
          Length = 454

 Score = 66.5 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 49/185 (26%), Gaps = 9/185 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +   ++   V  ++   Y            C  + I +      
Sbjct: 88  RVVVAMSGGVDSSVTAALLHEQGYDVVGITLQLYDHGAATARFKACCAGQDIYDAYRVAD 147

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L            + +N A        P   V     +        A  LG 
Sbjct: 148 MIGFPHYVLD---YESRFREDVIENFADAYVRGETPIPCVTCNQTVKFRDLVATARDLGA 204

Query: 129 TNIVIGVCETDYSGY-----PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +  G      +G            +            +    +  PL  + K +  + 
Sbjct: 205 DALATGHYIRREAGPGGAELHRAVDASRDQSYFLFATTHDQLDFLRFPLGDMPKDQVREH 264

Query: 184 AQDIG 188
           A+ +G
Sbjct: 265 ARRLG 269


>gi|325106196|ref|YP_004275850.1| hypothetical protein Pedsa_3496 [Pedobacter saltans DSM 12145]
 gi|324975044|gb|ADY54028.1| hypothetical protein Pedsa_3496 [Pedobacter saltans DSM 12145]
          Length = 440

 Score = 66.5 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 71/232 (30%), Gaps = 18/232 (7%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K+    + LFSGG DS       L         L+  Y  + K  L  +  +  K+    
Sbjct: 133 KEKYKQVNLFSGGLDSLIGAIDFLSTHPKDKILLASHYDPQMKGPLSDQTVLLDKLEVKY 192

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
               + +    +     L   +    T   +  I    +      G+ I  ++     + 
Sbjct: 193 KGQFNYVPSIKVT----LSQTTTKRETTFRSRSILFIGIALLISQGKKINEIIVPENGSV 248

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            L              S      H  +      I   ++ +  ++ P  +  K E     
Sbjct: 249 SLN----YPLSPSRRTSCSTRTTHSFVLEKTNLIISTLKINSNIYNPYEFKTKGEMVDDC 304

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEW----GYGCNSCPACYLRQKGWM 232
           +D+   + +  I+  S++C  GKR  R  W       C  C  C  RQ    
Sbjct: 305 EDL---EFLRKIIGFSNSC--GKRGHRKTWVNRSATHCGVCMPCIYRQASLQ 351


>gi|154250791|ref|YP_001411615.1| ExsB family protein [Parvibaculum lavamentivorans DS-1]
 gi|154154741|gb|ABS61958.1| ExsB family protein [Parvibaculum lavamentivorans DS-1]
          Length = 197

 Score = 66.5 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 59/216 (27%), Gaps = 35/216 (16%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL L SGG DSS    W          ++ DYGQ+  +            + L  K   
Sbjct: 2   KAL-LLSGGIDSSALAHWTRPD----ICVTLDYGQQAALGEAAASRAICSELHLEHKL-- 54

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                  + L+ LG  S +     +     +       +       L+    L       
Sbjct: 55  -----ISVDLSSLGSGSMAGRETALGGAAPEFWPYRNQMLVTLAAMLLQPIGLRE----- 104

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                +  T  +               A+    E  VTV  P   L   E  KL+     
Sbjct: 105 ----LMIGTVATDLHADGSVRFIQTLNALMRLQEGCVTVTAPAQNLTSTELLKLSS---- 156

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACY 225
                 ++  + +C        +   Y C  C  C 
Sbjct: 157 --FPRELIGVTFSC--------HLHRYACGQCSGCI 182


>gi|298373676|ref|ZP_06983665.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroidetes oral taxon 274 str. F0058]
 gi|298274728|gb|EFI16280.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroidetes oral taxon 274 str. F0058]
          Length = 361

 Score = 66.5 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 53/198 (26%), Gaps = 11/198 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK---VELECRLCVRKKIV 61
           +      LL  SGG DS+      + +   +  +++           E E   C    I+
Sbjct: 1   MSNKKKVLLSMSGGIDSTVAAILLMRQGYDLVGVTYRTWDSVSQGCFEREKGCCTINAIM 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           E      +     H L    +      S+ KN   +      PN  V     I       
Sbjct: 61  EARRMAAEMGFPHHFLD---IRQKFRDSVIKNFIDEYLAGRTPNPCVVCNAEIKWGEVVK 117

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLK 176
           LA  +    I  G      S                       L          PL  L 
Sbjct: 118 LADSMDCDYIATGHYARIESLNGKYYLKKGVDTNKDQTYFLWRLPQSVLRRTIFPLGELT 177

Query: 177 KYETWKLAQDIGGQDLVN 194
           K E  ++A D G + L  
Sbjct: 178 KPEVRQIAFDAGYEKLSK 195


>gi|134045269|ref|YP_001096755.1| thiamine biosynthesis/tRNA modification protein ThiI [Methanococcus
           maripaludis C5]
 gi|132662894|gb|ABO34540.1| thiamine biosynthesis/tRNA modification protein ThiI [Methanococcus
           maripaludis C5]
          Length = 383

 Score = 66.5 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 47/184 (25%), Gaps = 25/184 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+L S G DS         R  ++  L            +      +K  +L     D
Sbjct: 183 RVLVLLSDGIDSPVSAYMMAKRGCKLLLLHM----------KTSDEGLEKTQKLADVLSD 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E   + +            + +  ++ + N             L  A   A      
Sbjct: 233 FDPEAKFVYMDF------KEELEKIKAELTEINRDKYTCLYCKKYMLKMAEKYAKWHKCD 286

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I+ G      +                  +       +  PL+ L K E   +A+ IG 
Sbjct: 287 AIINGDNMGQVASQTLK---------NLRVISEGIDYPILRPLIGLDKIEIMDIARKIGT 337

Query: 190 QDLV 193
             + 
Sbjct: 338 FGIS 341


>gi|15922554|ref|NP_378223.1| thiamine biosynthesis protein ThiI [Sulfolobus tokodaii str. 7]
 gi|20140701|sp|Q96YE5|THII_SULTO RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|15623344|dbj|BAB67332.1| 368aa long hypothetical thiamine biosynthesis protein thiI
           [Sulfolobus tokodaii str. 7]
          Length = 368

 Score = 66.5 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 59/184 (32%), Gaps = 27/184 (14%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++LFSGG DS       + R   V  L+F  G            V KKIV    K   
Sbjct: 167 RTIVLFSGGFDSPIATWMMMKRGSSVTLLNFKLGG----------EVHKKIVLDEVKILS 216

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                H + +  +  I   S    V   I+        V     I    A  LA ++   
Sbjct: 217 EWNSGHKIKVYFVNGIKVLSALAGVKRYIR--------VVVLKRIMYKTAELLAKKINAY 268

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
           ++  G   +  S                     + ++ +  PL+   K E  +L++ +G 
Sbjct: 269 SVTTGESLSQVSSQTMK---------NLFVTEYDINIPIFRPLIGFDKEEIIELSRKVGT 319

Query: 190 QDLV 193
            +  
Sbjct: 320 YEYS 323


>gi|284035746|ref|YP_003385676.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Spirosoma linguale DSM 74]
 gi|283815039|gb|ADB36877.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Spirosoma linguale DSM 74]
          Length = 391

 Score = 66.5 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 57/197 (28%), Gaps = 11/197 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIV 61
           + K    L+  SGG DSS       +    V  ++    DY      + E   C    I 
Sbjct: 1   MSKHGRILVAMSGGIDSSLAAVMLHEEGYEVIGMTMKTWDYASSGGTKKETGCCSLDSIN 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +            +IL    + +    ++  +   +  +   PN  V     I       
Sbjct: 61  DARNIAVSLGFPHYILD---IREEFGDAVIDHFTGEYLEGRTPNPCVMCNTHIKWDALLR 117

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDT-----IRAIETAINLGMESHVTVHTPLMWLK 176
            A RL   +I  G                              +  ES      PL  L+
Sbjct: 118 RADRLDCESIATGHYAHIREDNGRFVLSKGVDTLKDQSYVLWGVSQESLSRTKLPLGHLR 177

Query: 177 KYETWKLAQDIGGQDLV 193
           K E   +A + G  +LV
Sbjct: 178 KSEIRDMATERGFMELV 194


>gi|303244454|ref|ZP_07330789.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Methanothermococcus okinawensis IH1]
 gi|302485152|gb|EFL48081.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Methanothermococcus okinawensis IH1]
          Length = 433

 Score = 66.1 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 47/184 (25%), Gaps = 25/184 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+L S G DS       + R      L           L+      KK  ++     D
Sbjct: 242 KVLILLSDGIDSPVASYLMIKRGCNAVFLH----------LKISEEGLKKTEKIFNVLND 291

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 ++              +N+   +++               L  A   A  L   
Sbjct: 292 YDYTSKLIVKDY------KEELQNIKSCLKEIGKEKYTCIFCKKNMLKIAEKYAKELNCD 345

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +                  +       +  PL+ L K E   +++ IG 
Sbjct: 346 AIVNGDNLGQVASQTLK---------NIAVISRGISYPILRPLIGLDKNEIIDISKKIGT 396

Query: 190 QDLV 193
             + 
Sbjct: 397 YGIS 400


>gi|170289979|ref|YP_001736795.1| hypothetical protein Kcr_0356 [Candidatus Korarchaeum cryptofilum
           OPF8]
 gi|170174059|gb|ACB07112.1| conserved hypothetical protein [Candidatus Korarchaeum cryptofilum
           OPF8]
          Length = 479

 Score = 66.1 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 20/220 (9%), Positives = 48/220 (21%), Gaps = 4/220 (1%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              ++ SGG+DS        +    V    F+   R+           +       +   
Sbjct: 149 KCGVMVSGGKDSLLSFMLLKEAGCEVHPFFFNESGRHWHVSLKAYRYFRAGEPRTSRVWS 208

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++        + +  +      K                    +  ++         G  
Sbjct: 209 NVDRLFNFIESNMRILVK-DFRKKTKEIYPIRLFWFEHWAFSFLPIMMRRGIGNIIFGNE 267

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                   + + G         ++ +    +             W        L      
Sbjct: 268 YDDPSSVSSYFKGIKHYNAVYDQSQDFEDYMTNWFKERGLGIKQWSPIRSISGLIVQRIL 327

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACY-LRQ 228
                 I++   +C+  +          C SC  C  +R 
Sbjct: 328 YRRYKDIMKLQMSCHTPR--YASGELRPCGSCYKCIGIRI 365


>gi|77919454|ref|YP_357269.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pelobacter carbinolicus DSM 2380]
 gi|123573968|sp|Q3A3F8|MNMA_PELCD RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|77545537|gb|ABA89099.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pelobacter carbinolicus DSM 2380]
          Length = 352

 Score = 66.1 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 52/190 (27%), Gaps = 11/190 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +K    L+  SGG DS+   +  L +  +V  ++        +           I + 
Sbjct: 1   MKEKNKHILVAMSGGVDSTVAAALLLAQGHQVSGVTMRVWDTEPLGDGREPA---HIRDA 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                D     H++    L +     +      +      PN  V    +         A
Sbjct: 58  RKVAFDLGIPLHVVD---LREEFLQQVVTPFCEEYLSGRTPNPCVLCNRVFKFSRLLREA 114

Query: 124 YRLGITNIVIGVCETDYSGYP-----DCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            RLG   +  G                  +           L  +    V  PL  + K 
Sbjct: 115 DRLGADALATGHYARIVEHDGLKVLAKGSNRQKDQSYFLFTLTQQQLQRVVFPLGEMSKE 174

Query: 179 ETWKLAQDIG 188
           E    A+ +G
Sbjct: 175 EVRTHAERLG 184


>gi|308049705|ref|YP_003913271.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ferrimonas balearica DSM 9799]
 gi|307631895|gb|ADN76197.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ferrimonas balearica DSM 9799]
          Length = 367

 Score = 66.1 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 56/192 (29%), Gaps = 12/192 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D   +    ++  SGG DSS      L +  +VE L     + +  E  C     + +
Sbjct: 1   MSD--NRNKKVIVGMSGGVDSSVSAYLLLQQGYQVEGLFMKNWEEDDTEEYCA--ASQDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +A            +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIELHSVN--FAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMW 174
             A  LG   I  G                               LG E       P+  
Sbjct: 115 FAAEALGADYIATGHYVRRRQREDGQFEMLRGLDGNKDQSYFLYTLGHEHVAQTLFPVGE 174

Query: 175 LKKYETWKLAQD 186
           L+K E  ++A++
Sbjct: 175 LEKPEVRRIAEE 186


>gi|210633921|ref|ZP_03297915.1| hypothetical protein COLSTE_01832 [Collinsella stercoris DSM 13279]
 gi|210159013|gb|EEA89984.1| hypothetical protein COLSTE_01832 [Collinsella stercoris DSM 13279]
          Length = 420

 Score = 66.1 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 54/184 (29%), Gaps = 25/184 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L S G DS         R   V  + F          +    + + I+E +     
Sbjct: 179 KVVTLLSSGIDSPVATWQLARRGAVVVPIHF---SGRPQTADTSEYLCQDIIEQLAP-AV 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G  +++P              ++             V     +    A  +A   G  
Sbjct: 235 QIGRMYVVPFGDCQREISMKTPSDL------------RVIMYRRVMYSVAERIAKIEGAK 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + +E  + +     + V  PL+   K E  + A+ IG 
Sbjct: 283 AIVTGESLGQVAS---------QTLENIMAVNEVVDIPVFRPLIGSDKQEIIERAKQIGT 333

Query: 190 QDLV 193
            D+ 
Sbjct: 334 YDIS 337


>gi|298675753|ref|YP_003727503.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Methanohalobium evestigatum Z-7303]
 gi|298288741|gb|ADI74707.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Methanohalobium evestigatum Z-7303]
          Length = 362

 Score = 66.1 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 61/182 (33%), Gaps = 22/182 (12%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           + L SGG DS       + R   +  +  D         E       K+V+ + +++   
Sbjct: 171 VALMSGGIDSPVAAYMMMKRGCSIIPIYVDID---PYLGEKGKERAFKVVDALKQYQP-G 226

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
            E  ++    L        T    +K  +++     +  R +  +      A +     I
Sbjct: 227 IELEVIGDDYL-------YTAKKILKHYNSDKYTCLICKRRLYRIAEDL--ANKYKALGI 277

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V G      +          + ++    L   +++ V+ PL+   K E   +A+ IG   
Sbjct: 278 VTGDSLGQVAS---------QTLDNLYVLDEATNLPVYRPLIGFDKEEVIDIARRIGTYS 328

Query: 192 LV 193
           L 
Sbjct: 329 LS 330


>gi|187780204|ref|ZP_02996677.1| hypothetical protein CLOSPO_03800 [Clostridium sporogenes ATCC
           15579]
 gi|187773829|gb|EDU37631.1| hypothetical protein CLOSPO_03800 [Clostridium sporogenes ATCC
           15579]
          Length = 359

 Score = 66.1 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/210 (12%), Positives = 57/210 (27%), Gaps = 12/210 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVELMP 65
               L+  SGG DSS       ++   V  ++    Q ++  +E     C    + +   
Sbjct: 5   KKKVLVGMSGGVDSSVAAYLLKEQGYEVIGVTMQIWQDDEEFIEKEGGCCSLSAVADARR 64

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    +++        +      +      +   PN  +     I        A  
Sbjct: 65  VANKIGIPFYVMNFKDAFKRNVIDYFVDE---YMEGRTPNPCIACNKFIKFSSFLDKAMA 121

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK-----KYET 180
           +GI  +  G                    +      + +          +      K + 
Sbjct: 122 MGIDYVATGHYAIIEKHNDRYIIKKSEDDKKDQTYALYNLTQFQLERTLMPCGQYKKSKI 181

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDK 210
            ++A++IG +       EE   C++   D 
Sbjct: 182 REIAKEIGLRVHNKKDSEEI--CFIPDNDH 209


>gi|257467821|ref|ZP_05631917.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
           [Fusobacterium ulcerans ATCC 49185]
 gi|317062110|ref|ZP_07926595.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium ulcerans ATCC 49185]
 gi|313687786|gb|EFS24621.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium ulcerans ATCC 49185]
          Length = 346

 Score = 66.1 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 60/189 (31%), Gaps = 18/189 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A++  SGG DSS       ++   V  ++ +   + +  L   +   ++I + +  
Sbjct: 2   NRKKAVIGMSGGVDSSVGAYLLKEQGYEVIGVTLN--HKKEKSLNEEIKAAQRICDFL-- 57

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 E  I+ +  L       +  +          P+  V     + +      A + 
Sbjct: 58  ----GIEHKIIDIEELFQKE---VIDDFLEGYSQGITPSPCVICDERVKMRVLFETADKE 110

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-------TVHTPLMWLKKYE 179
           G   +  G   +        R     + +   +     +         +  PL   +K +
Sbjct: 111 GAYFVATGHYSSVEYSEEFKRDLLKVSYDPRKDQSYMLYRLDNDKISRLLFPLHSYEKKQ 170

Query: 180 TWKLAQDIG 188
             ++A++IG
Sbjct: 171 IREIAKNIG 179


>gi|315635921|ref|ZP_07891183.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Arcobacter butzleri JV22]
 gi|315479900|gb|EFU70571.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Arcobacter butzleri JV22]
          Length = 345

 Score = 66.1 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 47/181 (25%), Gaps = 10/181 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS       +    VE +      R     E  L   + + + +   
Sbjct: 3   KKKVMVGMSGGIDSSVTAYMLQNEGYEVEGIYLKLHNRTDGYHEKNLGYIEDVAKFLNI- 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                + HIL LA            +          PN  V     I        A + G
Sbjct: 62  -----KYHILDLADEFSKEVYDYFVDS---YLSGTTPNPCVKCNKQIKFGAMLDFAKKHG 113

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE-TWKLAQD 186
              +  G        +     D  +     ++   +  +      +   K E   K    
Sbjct: 114 ADFLATGHYAKTDGKFFYEADDKTKDQSYFLSQVDKEALKYMMFPLSSYKKEDIVKFGAK 173

Query: 187 I 187
           +
Sbjct: 174 L 174


>gi|308274462|emb|CBX31061.1| tRNA-specific 2-thiouridylase mnmA [uncultured Desulfobacterium
           sp.]
          Length = 354

 Score = 65.7 bits (158), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 51/190 (26%), Gaps = 14/190 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV--RKKIVELM 64
                 +  SGG DS        ++   V  + F  G  +    +        +KI +L 
Sbjct: 1   MKEKIAIALSGGVDSLVAAYLLKNQGYDVTGIHFITGYEHGKVQDSGKNNPELQKITQLA 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            + + +      +            +        +    PN  +     I        A 
Sbjct: 61  KQIEIN------IEFFDCRTQFKQIVINYFTQTYKAGKTPNPCIICNQSIKFGVVLEFAK 114

Query: 125 RLGITNIVIGVCETDYSGYPDCRH------DTIRAIETAINLGMESHVTVHTPLMWLKKY 178
           ++G T +  G      +G     H                 L  +       PL    K 
Sbjct: 115 KIGCTFLATGHYAGKMTGRDGMFHLLKGADTKKDQSYFLSMLSQKQLSCAIFPLYGFTKK 174

Query: 179 ETWKLAQDIG 188
           E  +L+++ G
Sbjct: 175 EVIRLSEEKG 184


>gi|145592083|ref|YP_001154085.1| thiamine biosynthesis protein ThiI [Pyrobaculum arsenaticum DSM
           13514]
 gi|145283851|gb|ABP51433.1| thiamine biosynthesis/tRNA modification protein ThiI [Pyrobaculum
           arsenaticum DSM 13514]
          Length = 474

 Score = 65.7 bits (158), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 57/184 (30%), Gaps = 26/184 (14%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L L SGG DS       + R   V+ L  + G          + +R  +  +      
Sbjct: 173 KVLALVSGGIDSPVAAWLLMRRGAHVDVLHCNLGGT--------VALRHTLEVIKRLLAW 224

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           S G +  + +              VA  ++       +            A +A  +   
Sbjct: 225 SYGYNARVIIGDCS---------PVAKALRSGVREELWNIAFKRALYRIGAEVAKTVRAA 275

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      S          + ++      M   + +  PL+ + K E  KLAQ IG 
Sbjct: 276 ALVTGESLGQVSS---------QTLQALAAAEMGVGIPILRPLIGMDKDEITKLAQRIGT 326

Query: 190 QDLV 193
            ++ 
Sbjct: 327 YEIS 330


>gi|257074525|ref|YP_003162922.1| ExsB family protein [Candidatus Accumulibacter phosphatis clade IIA
           str. UW-1]
 gi|257048746|gb|ACV37931.1| ExsB family protein [Candidatus Accumulibacter phosphatis clade IIA
           str. UW-1]
          Length = 201

 Score = 65.7 bits (158), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 75/227 (33%), Gaps = 40/227 (17%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-RNKVELECRLCVRKKIVELMPKWK 68
           +A LL SGG DS +   W          ++ DYGQ     E+     + +++        
Sbjct: 2   TAALLLSGGMDSISIAWWKHPD----IAITIDYGQLPAAAEITASQAICRRLR------- 50

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 H+L +      S                    + P RN + +  AA  A  L +
Sbjct: 51  ---IPHHVLQVDCHSLGSGDMAGLEPNALAPA----TDWWPYRNQLLITLAAMKAVTLEV 103

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             + +G   +D S           +  +A+    E  +TV  P + +   +  + +   G
Sbjct: 104 RQLWLGTVASDASHRD--GTPNFLSAMSALLAVQEGGLTVSAPAIGMSTVDLVRQS---G 158

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPAC-----YLRQKG 230
                  IL  +H+C+             C +C  C      LR+ G
Sbjct: 159 VPL---EILAWAHSCHKAD--------VACGACRGCNKYFEVLRELG 194


>gi|325959014|ref|YP_004290480.1| tRNA sulfurtransferase [Methanobacterium sp. AL-21]
 gi|325330446|gb|ADZ09508.1| tRNA sulfurtransferase [Methanobacterium sp. AL-21]
          Length = 387

 Score = 65.7 bits (158), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 50/185 (27%), Gaps = 24/185 (12%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           + L SGG DS       + R   +  ++F+    +         + K   +L      S 
Sbjct: 180 ISLVSGGIDSPVATYLMMKRGVDITIVNFN---NHPFTSGSNEKIVKIYHKLKEYASGSD 236

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
                +                   K  +   P              A  +A +     I
Sbjct: 237 FRLLQVDYGEF------------LKKCTEEAPPRMTCVLCKSGMYQIAEKIAKQEKALAI 284

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           + G      +                +     + + V +PL+ L K E  ++A+ IG   
Sbjct: 285 IDGSSVGQVASQTLP---------NILATRYSTSMPVLSPLIGLDKLEISEIAEKIGTFQ 335

Query: 192 LVNLI 196
              L 
Sbjct: 336 YSILP 340


>gi|229815189|ref|ZP_04445525.1| hypothetical protein COLINT_02235 [Collinsella intestinalis DSM
           13280]
 gi|229809199|gb|EEP44965.1| hypothetical protein COLINT_02235 [Collinsella intestinalis DSM
           13280]
          Length = 406

 Score = 65.7 bits (158), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 54/184 (29%), Gaps = 25/184 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L S G DS         R   V  + F          +    + + I+E +     
Sbjct: 172 KVVTLLSSGIDSPVATWQLARRGAVVVPIHF---SGRPQTADTSEYLCRDIIEQLAP-AV 227

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G  +++P              ++             V     +    A  +A   G  
Sbjct: 228 QIGRMYVVPFGDCQREISMKTPSDL------------RVIMYRRVMYSVAERIARLEGAK 275

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + +E  + +     + V  PL+   K E  + A+ IG 
Sbjct: 276 AIVTGESLGQVAS---------QTLENIMAVNEVVDIPVFRPLIGSDKQEIIERAKRIGT 326

Query: 190 QDLV 193
            ++ 
Sbjct: 327 YEIS 330


>gi|296109903|ref|YP_003616852.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Methanocaldococcus infernus ME]
 gi|295434717|gb|ADG13888.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Methanocaldococcus infernus ME]
          Length = 371

 Score = 65.7 bits (158), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 48/186 (25%), Gaps = 25/186 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+ L S G DS       + R  R   L           L+       K+ +++    D
Sbjct: 179 RAVCLVSDGIDSPVAAFMMIKRGCRGVILH----------LKITEEALNKVRKIVEVLND 228

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E   +      ++           K +                L  A   A  L   
Sbjct: 229 YDPELEFVVYDYKKELEEIKEKLKSIKKEE------YTCIFCKKKMLKIAEKYAKYLNCD 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +                  +       +  PL+   K E  ++A+ IG 
Sbjct: 283 AIVTGDNLGQVASQTLK---------NLRVISSSIEFPILRPLIGFDKNEIVEIAKSIGT 333

Query: 190 QDLVNL 195
            ++   
Sbjct: 334 YNISIE 339


>gi|116327973|ref|YP_797693.1| hypothetical protein LBL_1262 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116120717|gb|ABJ78760.1| Hypothetical protein LBL_1262 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
          Length = 621

 Score = 65.7 bits (158), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 58/222 (26%), Gaps = 20/222 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             ++++LFSGG DS   +   L++ D  V   S       K          +K  +   +
Sbjct: 153 KKTSVVLFSGGADSLAGVLELLNQTDGNVILSSHQLSSSAKKTQNALYTSLEK--KFGNR 210

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 E H+                +   + +     +                    +
Sbjct: 211 IHHYKYECHL----------SGKRATDETQRSRSFLFSSIAFVLARTFHQKEFYLFENGV 260

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
              N+       +          T+  +    +L       +    ++  K E +++   
Sbjct: 261 TSLNLFRREDLMNSRASRTTHPQTLFKLMEFFSLVAGFQFEIKHNYVFKTKREVFEVI-- 318

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQ 228
                    ++  + +C      K       C  C  C  R+
Sbjct: 319 ---GKNSPELISSTVSCTKASFSK--GIATHCGRCFQCIDRR 355


>gi|301155019|emb|CBW14482.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
          Length = 66

 Score = 65.7 bits (158), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 2/50 (4%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELEC 52
          I++   AL++FSGGQDS+TCL   +  F  + VE ++F YGQR+ +ELE 
Sbjct: 3  IQQNKKALVIFSGGQDSTTCLFQVIAEFGKENVEVVTFQYGQRHAIELEK 52


>gi|328463085|gb|EGF34856.1| thiamine biosynthesis protein ThiI [Lactobacillus rhamnosus MTCC
           5462]
          Length = 110

 Score = 65.7 bits (158), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 37/120 (30%), Gaps = 16/120 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A L+ SGG DS     +AL R   +ET+ F                  K  +L  K   
Sbjct: 5   RAALMLSGGIDSPVAGYYALKRGVDIETVHFF------SPPYTSQQALNKAKQLTAKLTP 58

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G  + + +              +   ++        +  +  + L     +A  + I 
Sbjct: 59  YVGRIYFIEVPF----------TEIQEAVKATVPEGYLMTVQRRMMLRLTEAIANNVAIW 108


>gi|124003360|ref|ZP_01688210.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Microscilla marina ATCC 23134]
 gi|123991458|gb|EAY30889.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Microscilla marina ATCC 23134]
          Length = 386

 Score = 65.3 bits (157), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 56/198 (28%), Gaps = 11/198 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIV 61
           + K    L+  SGG DSS       ++   V  ++    DY      + E   C    I 
Sbjct: 1   MSKKGRVLVAMSGGIDSSLAAVLLHEQGYEVVGITMKTWDYASSGGSKKETGCCSLDSIN 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +      D      IL +             N      D   PN  V     I       
Sbjct: 61  DARNIAVDLGFPHLILDIRNEFGDYVIDHFTNE---YLDGRTPNPCVLCNTHIKWDALLR 117

Query: 122 LAYRLGITNIVIGVCETDYSGYPDC-----RHDTIRAIETAINLGMESHVTVHTPLMWLK 176
            A +L   +I  G                   +          +  +S      PL  L 
Sbjct: 118 RADKLDCEHIATGHYANIREENGRYVISKGIDEGKDQSYALWGVSQQSLSRTILPLGQLY 177

Query: 177 KYETWKLAQDIGGQDLVN 194
           K +  ++A + G  +LVN
Sbjct: 178 KSQIREMAIERGFVELVN 195


>gi|255524816|ref|ZP_05391766.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium carboxidivorans P7]
 gi|296188647|ref|ZP_06857035.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium carboxidivorans P7]
 gi|255511483|gb|EET87773.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium carboxidivorans P7]
 gi|296046911|gb|EFG86357.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium carboxidivorans P7]
          Length = 358

 Score = 65.3 bits (157), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 58/216 (26%), Gaps = 8/216 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS        +   V  ++    Q    E E        +  +   
Sbjct: 1   MNKKVVIGMSGGVDSSVAAYLLKQQGYDVIGVTMQVWQ-EDEEYEAVEGGCCSLSAVEDA 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            + +   D    +    DI   ++      +      PN  V     I        A  L
Sbjct: 60  RRVAYKLDIPFYVMNFKDIFKKNVIDYFIDEYMQGRTPNPCVACNKFIKFDALLKKAMEL 119

Query: 127 GITNIVIGVCE--TDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW---LKKYETW 181
           G   +  G       +      R       +    L   +   +   LM     KK    
Sbjct: 120 GADYVATGHYAVVEKHDNRYILRKSEDDKKDQTYALYNLTQFQLEHTLMPCGVYKKERIR 179

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
           ++A++IG         EE   C++   D        
Sbjct: 180 EIAKEIGLLVHNKKDSEEI--CFIPDNDHGGYIKKQ 213


>gi|255994117|ref|ZP_05427252.1| thiamine biosynthesis/tRNA modification protein ThiI [Eubacterium
           saphenum ATCC 49989]
 gi|255993785|gb|EEU03874.1| thiamine biosynthesis/tRNA modification protein ThiI [Eubacterium
           saphenum ATCC 49989]
          Length = 397

 Score = 65.3 bits (157), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 23/181 (12%), Positives = 48/181 (26%), Gaps = 25/181 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS         R   +  + F+                 K++ L  +  + +G   +  
Sbjct: 201 IDSPVAGFLMARRGMSISAVHFN------SYPYTSKRALDKVMRLKDQLAEYVGNFDV-- 252

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
                    +       M I+     N          +  A  +A  +    ++ G    
Sbjct: 253 --------RTVNLLPAQMAIRSKAPENEGTILTRRFMIRIANIIAEEVHANALITGESLG 304

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
             +           A            + +  PL+   K +   +A+DIG  D+     E
Sbjct: 305 QVASQTAESLAVTDAAAN---------LPILRPLIAYDKRDIIGIAKDIGCYDISVEPFE 355

Query: 199 E 199
           +
Sbjct: 356 D 356


>gi|150401225|ref|YP_001324991.1| thiamine biosynthesis/tRNA modification protein ThiI [Methanococcus
           aeolicus Nankai-3]
 gi|150013928|gb|ABR56379.1| thiamine biosynthesis/tRNA modification protein ThiI [Methanococcus
           aeolicus Nankai-3]
          Length = 406

 Score = 65.3 bits (157), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 48/185 (25%), Gaps = 25/185 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+L S G DSS    + + R      L                   +K  +L     D
Sbjct: 201 KVLVLLSDGIDSSVASYYIIKRGCNAVFLHMKL----------SEEGLEKTKKLCGVLND 250

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 ++ +            KN+   ++  N             L  A   A      
Sbjct: 251 YDCNSELIVVDY------KEELKNIVSNLKKINREKYACVFCKKTMLKIAEKYAKENNCH 304

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +                  +     + +  PL+   K E    A++IG 
Sbjct: 305 AIVNGDNLGQVASQTLK---------NLAVISEGVELPILRPLIGFDKQEIINKAKEIGT 355

Query: 190 QDLVN 194
            ++  
Sbjct: 356 YEISI 360


>gi|209964264|ref|YP_002297179.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhodospirillum centenum SW]
 gi|259495835|sp|B6ISD0|MNMA_RHOCS RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|209957730|gb|ACI98366.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhodospirillum centenum SW]
          Length = 392

 Score = 65.3 bits (157), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 50/185 (27%), Gaps = 9/185 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +   ++   V  ++   Y     V  +   C  + I +      
Sbjct: 14  RVVVAMSGGVDSSVTAALLKEQGYDVVGITLQLYDHGLTVGRKGACCAGQDIYDARQVAD 73

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           S+  + A        P   V     +        A  LG 
Sbjct: 74  RIDIPHYVLD---YESRFGQSVIDDFADSYLRGETPIPCVRCNQRVKFRDLLAQARDLGA 130

Query: 129 TNIVIGVCETDYSGYPDCRHDT-----IRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +  G      +G                              +  P+  L K ET  L
Sbjct: 131 DCLATGHYARRVAGPTGPALHRGADPARDQSYFLFATTPAQLDYLRFPIGHLPKSETRAL 190

Query: 184 AQDIG 188
           A+ +G
Sbjct: 191 AERLG 195


>gi|297618558|ref|YP_003706663.1| thiamine biosynthesis/tRNA modification protein ThiI [Methanococcus
           voltae A3]
 gi|297618618|ref|YP_003706723.1| thiamine biosynthesis/tRNA modification protein ThiI [Methanococcus
           voltae A3]
 gi|297377535|gb|ADI35690.1| thiamine biosynthesis/tRNA modification protein ThiI [Methanococcus
           voltae A3]
 gi|297377595|gb|ADI35750.1| thiamine biosynthesis/tRNA modification protein ThiI [Methanococcus
           voltae A3]
          Length = 429

 Score = 65.3 bits (157), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 53/185 (28%), Gaps = 25/185 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+L S G DS         R  ++  L            +      +K+ +L+   KD
Sbjct: 232 KVLVLTSDGIDSPVSAFMMAKRGCKLVLLHM----------KTSEEGAEKVQKLVNVLKD 281

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                  + +        +       + +            R +  L  A   AY+    
Sbjct: 282 YDPSLKYVEVDF----KETLQGIKDDLTVLKKEKYTCIFCKRRM--LKIAERFAYKYKCD 335

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I+ G      +                  +   +++ V  PL+   K E  +LA+ IG 
Sbjct: 336 AIINGDNMGQVASQTLK---------NLRVISNCTNLQVLRPLIGFDKVEIMRLAEKIGT 386

Query: 190 QDLVN 194
             +  
Sbjct: 387 LQISI 391


>gi|256028712|ref|ZP_05442546.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
           [Fusobacterium sp. D11]
 gi|289766621|ref|ZP_06525999.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium sp. D11]
 gi|289718176|gb|EFD82188.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium sp. D11]
          Length = 344

 Score = 65.3 bits (157), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 55/181 (30%), Gaps = 6/181 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKW 67
              ++  SGG DSS       ++   V  ++ +   + N  ++E    V  K+  +    
Sbjct: 2   KKVVIGMSGGVDSSVSAYLLKEQGYEVIGVTLNQHLEENSKDIEDAKKVCNKLEIIHEVV 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                 ++I+    L D   S  T +  +   D           +     + AT  Y   
Sbjct: 62  NIRKDFENIVIKYFL-DGYKSGKTPSPCVICDDEIKFKILFDIADKYKAEYVATGHYT-- 118

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             ++      + Y                   L       +  PL +  K E  ++A  +
Sbjct: 119 --SVEYSEIFSKYLLLKSVHSIIKDQSYMLYRLSPNKLERLIFPLKYYTKQEIREIALKL 176

Query: 188 G 188
           G
Sbjct: 177 G 177


>gi|124485194|ref|YP_001029810.1| hypothetical protein Mlab_0367 [Methanocorpusculum labreanum Z]
 gi|124362735|gb|ABN06543.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Methanocorpusculum labreanum Z]
          Length = 404

 Score = 65.3 bits (157), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 50/184 (27%), Gaps = 23/184 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+ L S G DS       + R   +  +  D G+        R      +  L      
Sbjct: 178 RAVALLSAGIDSPVAAWLMMRRGVVISGVFMDGGRWAGSA--TRDLAMDNVRILSTWCPG 235

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 I+ L    D   ++  +            +          +  A  +A    + 
Sbjct: 236 RGLPLWIVNLEPFFDAMMTACDR------------HYTCLFCKRFMMRVAEEVAKENKME 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + ++    +     + V  PL+   K E   +++ IG 
Sbjct: 284 GIVSGENLGQVAS---------QTLQNMGVITESVKLPVLRPLLTYDKEEIVAISRRIGT 334

Query: 190 QDLV 193
               
Sbjct: 335 YHES 338


>gi|301167622|emb|CBW27205.1| thiamine biosynthesis protein thiI [Bacteriovorax marinus SJ]
          Length = 401

 Score = 65.3 bits (157), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 57/192 (29%), Gaps = 25/192 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            + L SGG DS         R  + + + F               V++KI+++       
Sbjct: 183 VVTLISGGFDSPVASYMMSKRGCKQDFIFFY------AYPYVGEEVKEKIIDICSVLGQY 236

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +              +   I ++              +  A  LA R+    
Sbjct: 237 QKNCKLWVIPF----------GEIQNAISNDCYEEYRTILFRKYMIDTANLLANRVKADA 286

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         +      +         +  PL+   K E  + AQ++G  
Sbjct: 287 LVTGDALGQVSSQTMRNMSVLDNFSKRL---------ILRPLVGFNKIEIIRKAQEVGTH 337

Query: 191 DLVNLILEESHT 202
           D+  +  +++ +
Sbjct: 338 DISIIPHDDACS 349


>gi|120556554|ref|YP_960905.1| thiamine biosynthesis protein ThiI [Marinobacter aquaeolei VT8]
 gi|189030638|sp|A1U6U9|THII_MARAV RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|120326403|gb|ABM20718.1| [ThiS-adenylate] sulfurtransferase [Marinobacter aquaeolei VT8]
          Length = 484

 Score = 65.3 bits (157), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 61/184 (33%), Gaps = 25/184 (13%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            + + L SGG DSS      + R  R   L F+ G            V   + ++     
Sbjct: 179 ETVMTLISGGYDSSVAAYLMMRRGIRSHYLFFNLGG-------AAHEV--GVRQVAHYLW 229

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +  G  H +          S   + V  +I  +     +      + L  AA +A     
Sbjct: 230 ERYGSSHNVKFI-------SVPFEGVVAEIMRSVNHRHWGVVLKRMMLKAAAEIARDYNA 282

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
           + +V+G      S       + +      +         V  PL+ + K E  ++A+DIG
Sbjct: 283 SGLVMGDAVAQVSSQTLTNLNVVDRASDEV---------VLRPLIAMDKQEIIRIAKDIG 333

Query: 189 GQDL 192
            +  
Sbjct: 334 TEPF 337


>gi|327310171|ref|YP_004337068.1| thiamine biosynthesis protein ThiI [Thermoproteus uzoniensis
           768-20]
 gi|326946650|gb|AEA11756.1| thiamine biosynthesis protein ThiI [Thermoproteus uzoniensis
           768-20]
          Length = 470

 Score = 65.3 bits (157), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 65/184 (35%), Gaps = 26/184 (14%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L L SGG DS     + + R   V+ L  + G    +     L V  K++E    +  
Sbjct: 171 KVLALVSGGIDSPVAAWYMMRRGAYVDVLYCNLGG--VLTEAAALRVIDKLLEWSYGYDA 228

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +             ++  +   +   +  D++L +     R +  L   A  A  +   
Sbjct: 229 KV------------LVADCAPVADAIRRYVDHHLWSIAFK-RALYKLAERA--ARLVKAE 273

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      S          + ++    + M   + V  PL+ L K E  K+AQ IG 
Sbjct: 274 ALVTGESLGQVSS---------QTLQALSAVEMGIDLPVFRPLIGLDKEEIAKMAQRIGT 324

Query: 190 QDLV 193
            DL 
Sbjct: 325 YDLS 328


>gi|320536020|ref|ZP_08036080.1| thiamine biosynthesis/tRNA modification protein ThiI [Treponema
           phagedenis F0421]
 gi|320147133|gb|EFW38689.1| thiamine biosynthesis/tRNA modification protein ThiI [Treponema
           phagedenis F0421]
          Length = 394

 Score = 65.3 bits (157), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 52/181 (28%), Gaps = 25/181 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS       L R  +++ L F                ++K+  L  K  +         
Sbjct: 188 IDSPVAGYRMLFRGMKLDFLYFH------SHPYTSPEAQQKVETLAEKLAEY-------- 233

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
              LG   +      V  +I+             +  +  A  +A ++    ++ G    
Sbjct: 234 --GLGAYLNIVSFTKVQQQIKKTAPEAYLTLMMRMCMMKTAERIAKKVNAQCLITGESLA 291

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
             +          + +E            V  PL+ + K E   LA  IG  +   L  E
Sbjct: 292 QVAS---------QTVENLSVTNSCIDFPVFRPLIGMDKEEITALAIKIGTYETSILPYE 342

Query: 199 E 199
           +
Sbjct: 343 D 343


>gi|260495095|ref|ZP_05815224.1| tRNA methyl transferase [Fusobacterium sp. 3_1_33]
 gi|260197538|gb|EEW95056.1| tRNA methyl transferase [Fusobacterium sp. 3_1_33]
          Length = 343

 Score = 65.3 bits (157), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 51/181 (28%), Gaps = 7/181 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKW 67
              ++  SGG DSS       ++   V  ++ + Y + N  ++E    V  K+  +    
Sbjct: 2   KKVVIGMSGGVDSSVSAYLLKEQGYEVIGVTLNQYLEENSKDIEDTKKVCDKLGIIHEVV 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                 ++I+    L     S  T +  +   D           +     + A      G
Sbjct: 62  NIRKDFENIVIKYFLDG-YKSGKTPSPCVICDDEIKFKILFDIADKYKAEYVA-----TG 115

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
               V                           L       +  PL +  K E  ++A  +
Sbjct: 116 HYTSVEYSEIFSKYLLKSVHSIIKDQSYMLYRLSPNKLERLIFPLKYYTKQEIREIALKL 175

Query: 188 G 188
           G
Sbjct: 176 G 176


>gi|289578840|ref|YP_003477467.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacter italicus Ab9]
 gi|289528553|gb|ADD02905.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacter italicus Ab9]
          Length = 364

 Score = 65.3 bits (157), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 54/197 (27%), Gaps = 7/197 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL---CVRKKIV 61
           +KK    ++  SGG DSS       ++   V  ++    Q    E        C    + 
Sbjct: 1   MKKNNRVVVGMSGGVDSSVSAYLLKEQGYEVIGVTMQIWQDKDEEAVRVEGGCCSLSAVN 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +          + +++    +          +  ++ +  N             L+  A 
Sbjct: 61  DARRVANKIGIKYYVMNFKDVFKEKVIDYFVDEYLRGRTPNPCIACNKYIKFEELLKRAW 120

Query: 122 LAYRL----GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
           +        G   I     E            +        NL       +  PL   KK
Sbjct: 121 MIEAYYVATGHYAIKEYDEERGRYLLKKSVDTSKDQTYVLYNLTQTQLEHILFPLGKYKK 180

Query: 178 YETWKLAQDIGGQDLVN 194
            E  KLA+D+G      
Sbjct: 181 DEVRKLAKDLGLPVASK 197


>gi|76802526|ref|YP_327534.1| thiamine biosynthesis protein ThiI (ATP pyrophosphatase)
           [Natronomonas pharaonis DSM 2160]
 gi|76558391|emb|CAI49982.1| thiamine biosynthesis protein ThiI (ATP pyrophosphatase)
           [Natronomonas pharaonis DSM 2160]
          Length = 383

 Score = 65.3 bits (157), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 53/180 (29%), Gaps = 24/180 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           + L SGG DS    +  L R   V  +  D G      ++ R         L  +  ++ 
Sbjct: 176 VALVSGGIDSPVAAAEMLRRGAPVIPVYVDLGD--YGGVDHRARAISTCERLAARAPNTD 233

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
              +++      D   S+             L    +      F   A  +A       I
Sbjct: 234 CRPYVVDGGDTLDDIASA-------------LDRGRMLSVRRYFFAVAEAIAEIEDAAGI 280

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V G      S           A            + VH PL+ + K E  + A+ +G  +
Sbjct: 281 VTGEALGQKSSQTARNLQVTSAAVE---------LPVHRPLLSMDKPEITERARKLGTYE 331


>gi|307265916|ref|ZP_07547465.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919085|gb|EFN49310.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 376

 Score = 64.9 bits (156), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 62/203 (30%), Gaps = 13/203 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL---CVRK 58
           N  ++K    ++  SGG DSS       ++   V  ++    Q    E        C   
Sbjct: 10  NLSMQKNNRVVVGMSGGVDSSVAAYLLKEQGYEVIGVTMQIWQDKDEEAVRVEGGCCSLS 69

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
            + +          + +++      D+    +      +      PN  +     I    
Sbjct: 70  AVNDARRVANKIGIKYYVMN---FKDVFKEKVIDYFVDEYLKGRTPNPCIACNKYIKFEE 126

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA-------INLGMESHVTVHTP 171
               A+ +    +  G            R+   ++++T+        NL       +  P
Sbjct: 127 LLKRAWMIDAYYVATGHYAIKEYDEERGRYLLKKSVDTSKDQTYVLYNLTQTQLEHILFP 186

Query: 172 LMWLKKYETWKLAQDIGGQDLVN 194
           L   KK E  KLAQ++G      
Sbjct: 187 LGKYKKDEVRKLAQNLGLPVASK 209


>gi|150402523|ref|YP_001329817.1| thiamine biosynthesis/tRNA modification protein ThiI [Methanococcus
           maripaludis C7]
 gi|150033553|gb|ABR65666.1| thiamine biosynthesis/tRNA modification protein ThiI [Methanococcus
           maripaludis C7]
          Length = 383

 Score = 64.9 bits (156), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 47/184 (25%), Gaps = 25/184 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+L S G DS         R  ++  L            +      +K  +L     D
Sbjct: 183 RVLVLISDGIDSPVSAYMMAKRGCKLLLLHM----------KTSDEGLEKTQKLAEVLSD 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E   + +              +  ++ + N             L  A   A      
Sbjct: 233 FDPEAKFVYVDF------KEELAKIKAELTEINRDKYTCIYCKKYMLKLAEKHAKWHKCD 286

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I+ G      +                  +       +  PL+ L K E   +A+ IG 
Sbjct: 287 AIINGDNMGQVASQTLK---------NLRVISEGIDYPILRPLIGLDKVEIMDIARKIGT 337

Query: 190 QDLV 193
            ++ 
Sbjct: 338 FEIS 341


>gi|148285130|ref|YP_001249220.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Orientia tsutsugamushi str. Boryong]
 gi|205816896|sp|A5CFJ6|MNMA_ORITB RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|146740569|emb|CAM81183.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Orientia tsutsugamushi str. Boryong]
          Length = 369

 Score = 64.9 bits (156), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 50/189 (26%), Gaps = 9/189 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELM 64
           K+  + ++  SGG DSST  +   +    V  ++   Y     +  +   C  + I +  
Sbjct: 8   KEQATIVVAMSGGVDSSTVAAILKEDGYNVIGITMQLYNHDTAINRKGACCAGQDIYDAK 67

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     ++L      D    S+  N      +   P   V     +        A 
Sbjct: 68  FVANQLQIPHYVLN---YKDKFKESVIDNFIESYINGETPLPCVQCNQSVKFHDLLNFAK 124

Query: 125 RLGITNIVIGVCETDYSGY-----PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            L    +V G                                      +H PL  + K E
Sbjct: 125 DLQADALVTGHYVRRIDTANGIELHKAVDSKKDQSYFLFATTKSQLQYLHFPLGNMTKDE 184

Query: 180 TWKLAQDIG 188
           T   A   G
Sbjct: 185 TRYHANRYG 193


>gi|56476769|ref|YP_158358.1| hypothetical protein ebA2390 [Aromatoleum aromaticum EbN1]
 gi|56312812|emb|CAI07457.1| hypothetical protein ebA2390 [Aromatoleum aromaticum EbN1]
          Length = 457

 Score = 64.9 bits (156), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 63/235 (26%), Gaps = 31/235 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           A++ +S G DS                         +     R  VR ++          
Sbjct: 141 AIIAYSDGMDSRAVAGL-------------------ESSRLGRRLVRMRVGSKQHDVSKK 181

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
             E   +P   L         +N     +      + V       +   + +    G   
Sbjct: 182 --ERLRIPFTALPYSVKLENGRNAENSARSRGFKFSVVSTMAAYLIDAPSVIVPESGQGA 239

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGM-ESHVTVHTPLMWLKKYETWKLAQDIGG 189
           +   +            H    A+       +    +    P +W+ K ET +   D+ G
Sbjct: 240 LAPVLLPVGQGYEDYRNHPVFTALMARFFNALLGYKIQYRFPRLWMTKGETLREFVDVCG 299

Query: 190 QDLVNLILEESHTCYL-GKRDKRYEWGYGCNSCPACYLRQ-----KGWMEFKEKY 238
            +        + +C+   ++         C  C AC LR+      G  E  + Y
Sbjct: 300 SEAR---WATTRSCWQQSRQVAVSGERRQCGVCAACILRRLSVHAAGLNELPKTY 351


>gi|257051599|ref|YP_003129432.1| thiamine biosynthesis protein [Halorhabdus utahensis DSM 12940]
 gi|256690362|gb|ACV10699.1| thiamine biosynthesis protein [Halorhabdus utahensis DSM 12940]
          Length = 407

 Score = 64.9 bits (156), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 55/185 (29%), Gaps = 24/185 (12%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           + L SGG DS       + R   V  +  D G      ++ R      +  L  +  +  
Sbjct: 191 VALISGGIDSPVAAWQVMTRGAPVVPVYVDLGD--YGGVDHRARAETTVAALARRAPNFD 248

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
               +L              K V   + + +        R +     A T+A       I
Sbjct: 249 LRLRVLD-----------GGKAVEELVAETDDTRMLSLRRFMY--RAAETVAREHDAVGI 295

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V G      S          +           + + +H PL+ + K +  + A+D+   D
Sbjct: 296 VSGEAIGQKSS---------QTTANIAATDGVTDLPIHRPLLTMDKTDIIEAARDLETYD 346

Query: 192 LVNLI 196
              + 
Sbjct: 347 DATVP 351


>gi|118444647|ref|YP_878354.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium novyi NT]
 gi|205813888|sp|A0Q152|MNMA_CLONN RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|118135103|gb|ABK62147.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium novyi NT]
          Length = 350

 Score = 64.9 bits (156), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 54/190 (28%), Gaps = 19/190 (10%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           ++K +    +  SGG DSS       ++   +  ++        V  +    V  K+   
Sbjct: 1   MVKMSKKVAVGLSGGVDSSVAAYLLKEKGYDLIGITMKVSCDLDVSED-AKKVADKLG-- 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      +++ L    +   + +  N A +      PN        I        A
Sbjct: 58  --------IPYYVIDLT---EEFKNKVIDNFAEEYLQGRTPNPCAVCNKHIKFGALIQKA 106

Query: 124 YRLGITNIVIGVCETDYSGYPDC-----RHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G                 + D         +L  +    +  P     K 
Sbjct: 107 KELGADYIATGHYARIEEHNGRFLVLNAKDDKKDQTYMFYSLTQDVLKHILMPCGEYTKD 166

Query: 179 ETWKLAQDIG 188
           +  ++A+ IG
Sbjct: 167 QIREIAKKIG 176


>gi|297545060|ref|YP_003677362.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacter mathranii subsp. mathranii str. A3]
 gi|296842835|gb|ADH61351.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacter mathranii subsp. mathranii str. A3]
          Length = 364

 Score = 64.9 bits (156), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 61/200 (30%), Gaps = 13/200 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL---CVRKKIV 61
           +KK    ++  SGG DSS       ++   V  ++    Q    E        C    + 
Sbjct: 1   MKKNNRVVVGMSGGVDSSVSAYLLKEQGYEVIGVTMQIWQDKDEEAVRVEGGCCSLAAVN 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +          + +++    +          +  ++ +  N     +     I       
Sbjct: 61  DARRVANKIGIKYYVMNFKDVFKEKVIDYFVDEYLRGRTPNPC---IACNKYIKFEELLK 117

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA-------INLGMESHVTVHTPLMW 174
            A+ +    +  G            R+   ++++T+        NL       +  PL  
Sbjct: 118 RAWMIDAYYVATGHYAIKEYDEERRRYLLKKSVDTSKDQTYVLYNLTQTQLEHILFPLGK 177

Query: 175 LKKYETWKLAQDIGGQDLVN 194
            KK E  KLA+D+G      
Sbjct: 178 YKKDEVRKLAKDLGLPVASK 197


>gi|325281886|ref|YP_004254428.1| tRNA-specific 2-thiouridylase mnmA [Odoribacter splanchnicus DSM
           20712]
 gi|324313695|gb|ADY34248.1| tRNA-specific 2-thiouridylase mnmA [Odoribacter splanchnicus DSM
           20712]
          Length = 364

 Score = 64.9 bits (156), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 59/196 (30%), Gaps = 11/196 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETL---SFDYGQRNKVELECRLCVRKKIVEL 63
           +    L+  SGG DS+      L++   +  +   +FD   R  +E E   C    + E 
Sbjct: 2   EKKRVLMAMSGGIDSTVAAMLLLEQGYELVGVTYRTFDNISRGCMEKEKGCCSVDSLFEA 61

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
               ++   E HIL    +      ++  N   +      PN  V   + I        A
Sbjct: 62  KRMAQELGFEHHILD---IRQEFKDTVITNFIGEYLQGRTPNPCVICNSTIKWGKLIETA 118

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDT-----IRAIETAINLGMESHVTVHTPLMWLKKY 178
             +    I  G                              L  E+      PL  L K 
Sbjct: 119 NEMRCDYIATGHYARIGHQDGRRYLRKGADLSKDQTYFLWTLTQENLSRTLFPLGELTKP 178

Query: 179 ETWKLAQDIGGQDLVN 194
           E  ++A D G + L  
Sbjct: 179 EVRQIAFDHGYEKLSK 194


>gi|90419040|ref|ZP_01226951.1| tRNA methyl transferase
           ((5-methylaminomethyl-2-thiouridylate)-
           methyltransferase) [Aurantimonas manganoxydans SI85-9A1]
 gi|90337120|gb|EAS50825.1| tRNA methyl transferase
           ((5-methylaminomethyl-2-thiouridylate)-
           methyltransferase) [Aurantimonas manganoxydans SI85-9A1]
          Length = 425

 Score = 64.9 bits (156), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 56/198 (28%), Gaps = 12/198 (6%)

Query: 1   MNDIIKKAP-----SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLC 55
           M++ +           ++  SGG DSS   +   ++   V  ++       +       C
Sbjct: 36  MSNSLDLPKPPADTRVVVAMSGGVDSSVVAAILKEQGYDVVGITLQLYDAGEGARRAGSC 95

Query: 56  VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
              + +    +  ++LG  H +      D    ++    A        P   V     + 
Sbjct: 96  CAGQDIHDARRVAETLGIHHYV--LDYEDRFRKAVINPFAASYLAGETPIPCVACNQTVK 153

Query: 116 LVFAATLAYRLGITNI---VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
                  A  LG   +          + +     R   +   ++    G           
Sbjct: 154 FRDLLATAQDLGADALATGHYIESRQNGAHRSLYRPADLDRDQSYFLYGTTQEQLDFLRF 213

Query: 173 M--WLKKYETWKLAQDIG 188
               L K +T +LA+  G
Sbjct: 214 PLGGLTKPQTRELAERHG 231


>gi|257486728|ref|ZP_05640769.1| ExsB family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|331010197|gb|EGH90253.1| ExsB family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 201

 Score = 64.9 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 74/217 (34%), Gaps = 36/217 (16%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKW 67
             AL L SGG DS     W          ++ +YGQ   + E+     + +++       
Sbjct: 2   KRAL-LLSGGMDSLAVAWWQRPE----VGITLNYGQLAAEAEIAASKTICEQL------- 49

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                E H++ +      S                  + + P RN + +  AA  A  LG
Sbjct: 50  ---QIEHHVISIDCRSIGSGDMAGGQADAHAPA----SDWWPYRNQMLVTLAAMKAISLG 102

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  + +G  ++D S           A  + +    E  + V  P + L   E  ++A   
Sbjct: 103 INKLYLGTVKSDGSHRDGTPEFV--AAISQLMAIQEGEMIVEAPAIGLSTVELVRIA--- 157

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPAC 224
           G    +   L  +H+C        ++    C +C  C
Sbjct: 158 GVPSSM---LAWAHSC--------HKSNVACGNCRGC 183


>gi|257388353|ref|YP_003178126.1| thiamine biosynthesis protein [Halomicrobium mukohataei DSM 12286]
 gi|257170660|gb|ACV48419.1| thiamine biosynthesis protein [Halomicrobium mukohataei DSM 12286]
          Length = 395

 Score = 64.6 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 53/186 (28%), Gaps = 24/186 (12%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            ++L SGG DS       L R   V  +  D G       + R         L     + 
Sbjct: 188 VVVLLSGGIDSPVAAWKLLKRGCPVVPVYVDLG--AYGGPDHRARALSTAETLASYVPN- 244

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                 + L+        +    V  ++ D       +  R  + L   A +A R     
Sbjct: 245 ------VDLS-----VRVADGGAVVERLADELDARRMLALRRFM-LAVGARVAERTDAVG 292

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +  G      S          +         +     V  P +   K +  +LA++IG  
Sbjct: 293 VATGEAIGQKSS---------QTSANLAVTDVAVDCPVFRPNLTADKADITQLAREIGTF 343

Query: 191 DLVNLI 196
           +   + 
Sbjct: 344 EASTIP 349


>gi|169350064|ref|ZP_02867002.1| hypothetical protein CLOSPI_00804 [Clostridium spiroforme DSM 1552]
 gi|169293277|gb|EDS75410.1| hypothetical protein CLOSPI_00804 [Clostridium spiroforme DSM 1552]
          Length = 387

 Score = 64.6 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/200 (10%), Positives = 43/200 (21%), Gaps = 17/200 (8%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-----QRNKVELECRLCV 56
           +++ + +   +L  SGG DS+        +   V  +                      +
Sbjct: 6   SEVTRMSKRVVLGLSGGVDSAVAAYLLKKQGYEVIGVFMRNWDSQLNNDILGNPTNDNDI 65

Query: 57  R---KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
               +   +     K    E   +    + +   +  T  +    +        +     
Sbjct: 66  CPQEQDYNDAKAVAKCLGIEIKRVD--FIKEYWDNVFTYFLDEYRKGRTPNPDILC-NKH 122

Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
           I        A  L    I  G                               +       
Sbjct: 123 IKFKAFLNYAKTLNADYIATGHYARVVHSENKDSIMLKGIDNNKDQTYFLCQLNQQQLQN 182

Query: 174 WL------KKYETWKLAQDI 187
            L       K E  +LA ++
Sbjct: 183 SLFPLGEIDKKEVRRLAHEL 202


>gi|297616542|ref|YP_003701701.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Syntrophothermus lipocalidus DSM 12680]
 gi|297144379|gb|ADI01136.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Syntrophothermus lipocalidus DSM 12680]
          Length = 340

 Score = 64.6 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 49/191 (25%), Gaps = 22/191 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +    +L SGG DS        ++   V  L+          L     V +K  E+   
Sbjct: 1   MSERVAVLMSGGVDSGVAALLLKEQGYDVIGLTM---------LNWSAEVCQKAAEVARF 51

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   H++    L       +        ++   PN  V     +        A+ +
Sbjct: 52  LG---ISHHVVD---LRAEFKRQVIDYFCRTYEEGLTPNPCVVCNEFVKFGLMLEQAWDV 105

Query: 127 GITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           G   +  G            RH                  L       +  PL  + K E
Sbjct: 106 GCRWVATGHYARVELDETTGRHLLKKGVDPKKDQSYFLYRLKQNQLCRLLFPLGNMTKQE 165

Query: 180 TWKLAQDIGGQ 190
           T  +A   G  
Sbjct: 166 TKSIAAKYGLP 176


>gi|28211134|ref|NP_782078.1| tRNA-specific 2-thiouridylase MnmA [Clostridium tetani E88]
 gi|75542384|sp|Q894S7|MNMA2_CLOTE RecName: Full=tRNA-specific 2-thiouridylase mnmA 2
 gi|28203574|gb|AAO36015.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
           [Clostridium tetani E88]
          Length = 358

 Score = 64.6 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 53/188 (28%), Gaps = 10/188 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVELMP 65
               L+  SGG DSS       ++   V   +    Q +K  +E     C    + +   
Sbjct: 5   KKKVLVGMSGGVDSSVAAYLLKEQGYEVIGATMQIWQDDKEFIEREGGCCSLSAVADARR 64

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    +++        +      +      +   PN  V     I        A  
Sbjct: 65  VANKIGIPFYVMNFKDAFKKNVIDYFVDE---YMEGRTPNPCVACNKFIKFSSFLDKAMT 121

Query: 126 LGITNIVIGVCE--TDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW---LKKYET 180
           LGI  +  G        +     R       +    L   +   +   LM     KK E 
Sbjct: 122 LGIDYVATGHYAIIEKQNNRYIVRKSEDDKKDQTYALYNLTQFQLERTLMPCGRYKKSEI 181

Query: 181 WKLAQDIG 188
            ++A+ IG
Sbjct: 182 REIAKKIG 189


>gi|119719237|ref|YP_919732.1| thiamine biosynthesis protein ThiI [Thermofilum pendens Hrk 5]
 gi|119524357|gb|ABL77729.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermofilum
           pendens Hrk 5]
          Length = 484

 Score = 64.6 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 57/184 (30%), Gaps = 25/184 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L L SGG DS+    + L R   V  L  +        L     V KK+ +       
Sbjct: 176 KVLALISGGYDSAVAAWYMLKRGAEVHYLYCNMAGDLTKSLVLS--VAKKLADSWSY--G 231

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                ++   + L              +++    P  F           A  +A R+G  
Sbjct: 232 YKPRLYVADFSPL------------LRELRAKVAPELFGVVLKRYMYRVAEAIAGRIGAI 279

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      S          + +E        + + ++ PL+   K E    +++IG 
Sbjct: 280 GIVTGESLGQVSS---------QTLENLYVASQATSMPIYRPLIGFDKEEIISKSKEIGT 330

Query: 190 QDLV 193
            +  
Sbjct: 331 YEES 334


>gi|189183712|ref|YP_001937497.1| tRNA-specific 2-thiouridylase MnmA [Orientia tsutsugamushi str.
           Ikeda]
 gi|189180483|dbj|BAG40263.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Orientia tsutsugamushi str. Ikeda]
          Length = 369

 Score = 64.6 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 50/189 (26%), Gaps = 9/189 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELM 64
           K+  + ++  SGG DSST  +   +    V  ++   Y     +  +   C  + I +  
Sbjct: 8   KEQATIVVAMSGGVDSSTVAAILKEDGYNVIGITMQLYNHDTAINRKGACCAGQDIYDAK 67

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     ++L      D    S+  N      +   P   V     +        A 
Sbjct: 68  FVANQLQIPHYVLN---YKDKFKKSVIDNFIESYINGETPLPCVQCNQSVKFHDLLNFAK 124

Query: 125 RLGITNIVIGVCETDYSGY-----PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            L    +V G                                      +H PL  + K E
Sbjct: 125 DLQADALVTGHYVRRIDTANGIELHKAVDSKKDQSYFLFATTKSQLQYLHFPLGNMTKDE 184

Query: 180 TWKLAQDIG 188
           T   A   G
Sbjct: 185 TRYHANRYG 193


>gi|237741407|ref|ZP_04571888.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium sp. 4_1_13]
 gi|229430939|gb|EEO41151.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium sp. 4_1_13]
          Length = 343

 Score = 64.6 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 50/181 (27%), Gaps = 7/181 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKW 67
              ++  SGG DSS       ++   V  ++ +   + N  ++E    V  K+  +    
Sbjct: 2   KKVVIGMSGGVDSSVSAYLLKEQGYEVIGVTLNQHLEENSKDIEDAKKVCDKLGIIHKVV 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                 ++I+    L     + +T +  +   D           +     + A      G
Sbjct: 62  NIRKDFENIVIKYFLDG-YKTGITPSPCIICDDEIKFKILFDIADKYKAEYVA-----TG 115

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
               V                           L       +  PL    K E  ++A  I
Sbjct: 116 HYTSVEYSKIFSKYLLKSVHSIIKDQSYMLYRLSSNKLERLIFPLKDYSKQEIREIALKI 175

Query: 188 G 188
           G
Sbjct: 176 G 176


>gi|289678019|ref|ZP_06498909.1| ExsB family protein [Pseudomonas syringae pv. syringae FF5]
          Length = 201

 Score = 64.6 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 72/224 (32%), Gaps = 35/224 (15%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKWKDSL 71
           LL SGG DS T   W           + +YGQ   + E+E    + +++           
Sbjct: 5   LLLSGGMDSLTIAWWKRPD----IAFTLNYGQLAAQAEIEASRTICQQLG---------- 50

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
              H++ +      S                  + + P RN + +  AA  A   G+T++
Sbjct: 51  IPHHVIEVDCRQLGSGDMAGTQADSLAPA----SDWWPYRNQMLVTLAAMKAISFGVTHL 106

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
            +G  ++D                  +    E  + V  P + L   E  +         
Sbjct: 107 WLGTVKSDGFHRDGSPEFMSAISH--LVSIQEGGMVVEAPAIELSTAELVR------ESG 158

Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           +   +L  +H+C        ++    C +C  C    + + E  
Sbjct: 159 IPASLLAWAHSC--------HKSHVACGNCRGCNKYMEVFQEVG 194


>gi|255536681|ref|YP_003097052.1| tRNA-specific 2-thiouridylase MnmA [Flavobacteriaceae bacterium
           3519-10]
 gi|255342877|gb|ACU08990.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Flavobacteriaceae bacterium 3519-10]
          Length = 395

 Score = 64.6 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 51/189 (26%), Gaps = 13/189 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS        +   V  L         V LE      +   + +   + 
Sbjct: 2   KIVVGLSGGVDSSVAAYLLQKQGHEVVALFMRNWNDASVTLEDECPWIEDSNDALMVAQK 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 ++ ++ L                +    PN  V     +        A  LG  
Sbjct: 62  LGIPFQVIDMSELYKEKIVDYMFAE---YEKGRTPNPDVLCNREVKFDVFMKTALSLGAE 118

Query: 130 NIVIGVCETDYSGYPDCRHDTI----------RAIETAINLGMESHVTVHTPLMWLKKYE 179
            +  G      S   +  ++                    L  +       P+  L K E
Sbjct: 119 KVATGHYARVDSTVDENGNEMFHLLAGKDNNKDQSYFLCQLSQDQLSKSLFPIGELTKPE 178

Query: 180 TWKLAQDIG 188
             ++A++IG
Sbjct: 179 VREIAKEIG 187


>gi|325107539|ref|YP_004268607.1| hypothetical protein Plabr_0964 [Planctomyces brasiliensis DSM
           5305]
 gi|324967807|gb|ADY58585.1| hypothetical protein Plabr_0964 [Planctomyces brasiliensis DSM
           5305]
          Length = 448

 Score = 64.6 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 61/225 (27%), Gaps = 22/225 (9%)

Query: 13  LLFSGGQDSSTCL--SWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            LFSGG DS        A +   R+  +   Y        + +  ++ ++ E  P     
Sbjct: 145 CLFSGGLDSLAGAVDFLAFEPEKRLSLVGH-YDPTPGTVKKDQTQLKSRLSEAYP----- 198

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL--VFAATLAYRLGI 128
                         +   S  ++    ++  +L    +       L       +     I
Sbjct: 199 -------NRLDAALVCVGSDQESPESSMRSRSLLFVALGICVAEHLGAGVPLLVPENGTI 251

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
              V        S      H     +   +   +     +  PL+   K E      D  
Sbjct: 252 ALNVPLTPARRGSCSTRTTHPHYIDLLQQVLTEVGLDHAIKNPLLGKTKGEVVSQCLD-- 309

Query: 189 GQDLVNLILEESHTCYLGKR--DKRYEWGYGCNSCPACYLRQKGW 231
             +L+ ++  ES +C           +    C  C  C  R+   
Sbjct: 310 -PNLIAVVAHESKSCAKPGHKSHWTRKSASQCGQCMPCIYRRAAL 353


>gi|198277561|ref|ZP_03210092.1| hypothetical protein BACPLE_03783 [Bacteroides plebeius DSM 17135]
 gi|198270059|gb|EDY94329.1| hypothetical protein BACPLE_03783 [Bacteroides plebeius DSM 17135]
          Length = 402

 Score = 64.6 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 49/174 (28%), Gaps = 12/174 (6%)

Query: 5   IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +++    ++ FSGG D S T +  A ++   V     + G  +  +L+       K+  +
Sbjct: 1   MEEKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSPEQLKKNEENAYKLGAV 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                        + L +  +    SL   V   +  N      V    I   +  A  A
Sbjct: 61  -----------KYVTLDVTQEYYEKSLKYMVFGNVLRNGTYPISVSSERIFQALAIARYA 109

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
             +G   I  G                + A    I              +   K
Sbjct: 110 NEIGAHAIAHGSTGAGNDQVRFDMTFLVMAPGVEIITLTRDMALSREYEINYLK 163


>gi|159905702|ref|YP_001549364.1| thiamine biosynthesis/tRNA modification protein ThiI [Methanococcus
           maripaludis C6]
 gi|159887195|gb|ABX02132.1| thiamine biosynthesis/tRNA modification protein ThiI [Methanococcus
           maripaludis C6]
          Length = 383

 Score = 64.6 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 46/184 (25%), Gaps = 25/184 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+L S G DS         R  ++  L            +      +K  +L     D
Sbjct: 183 RVLVLLSDGIDSPVSAFMMAKRGCKLLLLHM----------KTSDEGLEKTQKLADVLSD 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E   + +              +  ++ + N             L  A   A      
Sbjct: 233 FDPEAKFVYVDF------KEELTKIKAELTEINRDKYTCLYCKKYMLKLAEKYAKWHKCD 286

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I+ G      +                  +       +  PL+   K E   +A+ IG 
Sbjct: 287 AIINGDNMGQVASQTLK---------NLRVISEGIDYPILRPLIGFDKVEIMDIARKIGT 337

Query: 190 QDLV 193
            D+ 
Sbjct: 338 FDIS 341


>gi|257463089|ref|ZP_05627490.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
           [Fusobacterium sp. D12]
 gi|317060688|ref|ZP_07925173.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium sp. D12]
 gi|313686364|gb|EFS23199.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium sp. D12]
          Length = 345

 Score = 64.6 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 49/184 (26%), Gaps = 4/184 (2%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                +L  SGG DS+            V  + F        + E +    +KI +    
Sbjct: 1   MKEKVILGMSGGVDSAVAAYLLQKEGYEVIAVHFSVHNTEATQKELQD--CQKIADKFSL 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              S   +      I+      +            +    F           A  +A   
Sbjct: 59  TLYSYSLEKEFREKIISYYLSETGKGKTPSPCPLCDDSIKFHLLFQEAEKRKANYVATGH 118

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
             +     +C    +      H           L  +    +  PL  L+K E  +LA+D
Sbjct: 119 YASISRNNICN--TTLLEVKHHIHKDQCYMLYRLSPKKLNKILFPLASLEKAEVRELARD 176

Query: 187 IGGQ 190
           IG  
Sbjct: 177 IGLF 180


>gi|158425974|ref|YP_001527266.1| tRNA-specific 2-thiouridylase MnmA [Azorhizobium caulinodans ORS
           571]
 gi|172047846|sp|A8HVS0|MNMA_AZOC5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|158332863|dbj|BAF90348.1| TRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Azorhizobium caulinodans ORS 571]
          Length = 390

 Score = 64.2 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 49/188 (26%), Gaps = 10/188 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS            V  ++   Y Q      +   C  + I +      
Sbjct: 16  RVVVAMSGGVDSSVVAGLLARAGFDVVGVTLQLYDQGEAARRKGACCAGQDIYDARDVAD 75

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L            + +  A        P   V     +        A  LG 
Sbjct: 76  RLGIPHYVLD---YESRFREEVIERFADSYAAGFTPIPCVDCNRTVKFRDLLATAEDLGA 132

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMWLKKYETWK 182
           + +  G      +     R     A E                  +  PL  ++K +   
Sbjct: 133 SVLATGHYVASRALPDGRRGLFRAAEENRDQSYFLYATTQAQATKLRFPLGGMRKSDVRA 192

Query: 183 LAQDIGGQ 190
           LA ++G  
Sbjct: 193 LAAELGLP 200


>gi|254788242|ref|YP_003075671.1| thiamine biosynthesis protein ThiI [Teredinibacter turnerae T7901]
 gi|237686357|gb|ACR13621.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Teredinibacter turnerae T7901]
          Length = 490

 Score = 64.2 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 59/195 (30%), Gaps = 25/195 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      L L SGG DS+      + R  R     F+ G R          +   +    
Sbjct: 176 MGTQDPVLSLVSGGFDSTVASYLMMKRGLRTHFCFFNLGGR--DHELGVKEIAFYL---- 229

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             W        +           +   + V  +I +   P         + L  A  +A 
Sbjct: 230 --WNRYSASHRV--------RFVTVPFEGVVEEILEKIDPANMGVVLKRMMLRAAEKIAA 279

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           R  I  +V G      S         I  +   +         V  PL+ + K E  +L+
Sbjct: 280 RGDIQALVTGEAVAQVSSQTIPNLSAIERVCNTL---------VLRPLIAMDKPEIIRLS 330

Query: 185 QDIGGQDLVNLILEE 199
           ++IG ++    I E 
Sbjct: 331 REIGAEEFSANIPEY 345


>gi|268316165|ref|YP_003289884.1| thiamine biosynthesis/tRNA modification protein ThiI [Rhodothermus
           marinus DSM 4252]
 gi|262333699|gb|ACY47496.1| thiamine biosynthesis/tRNA modification protein ThiI [Rhodothermus
           marinus DSM 4252]
          Length = 500

 Score = 64.2 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 62/200 (31%), Gaps = 28/200 (14%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL+L SGG DS+     A+ R   V+ L  + G +        L V K + +       S
Sbjct: 186 ALVLISGGFDSAVAAWLAMRRGVSVDYLFCNLGGKA--YERAVLQVAKVLAD-----AWS 238

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G          G          V  +++ +  P  +      +       +A R     
Sbjct: 239 FGTRPRFYSVDFG---------PVVDEMRRHVRPAYWQVVLKRLMYRAGEAVARRTEALA 289

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           ++ G      S         I A          + + V  PL+   K E   LA+ IG  
Sbjct: 290 LITGESLGQVSSQTLKNLQAIEA---------GTSLPVLRPLLTYDKEEIINLARKIGTA 340

Query: 191 DLVNLILEESHTCYLGKRDK 210
            L   + E    C L     
Sbjct: 341 TLSERVREY---CALPPDRP 357


>gi|119872484|ref|YP_930491.1| thiamine biosynthesis protein ThiI [Pyrobaculum islandicum DSM
           4184]
 gi|119673892|gb|ABL88148.1| thiamine biosynthesis/tRNA modification protein ThiI [Pyrobaculum
           islandicum DSM 4184]
          Length = 472

 Score = 64.2 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 57/190 (30%), Gaps = 26/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L L SGG DS       + R   V+    + G            V + I  L      
Sbjct: 173 KVLALVSGGIDSPVAAWMMMRRGAHVDVFYCNLGG-----TFVARLVVEVIKRL---LSW 224

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           S G +  + +     I  +                  ++  R +         A  +  T
Sbjct: 225 SYGYNARVVITDCAPIGRTIRRNVKEELWNIAFKRALYLTARKV---------ADIVRAT 275

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      S          + ++    +     + V  PL+ + K E  +LA+ IG 
Sbjct: 276 ALVTGESLGQVSS---------QTLQALAAVERGLDIPVMRPLVGMDKDEIIQLARKIGT 326

Query: 190 QDLVNLILEE 199
            +L   I E 
Sbjct: 327 YELSIKIPEY 336


>gi|84488989|ref|YP_447221.1| hypothetical protein Msp_0160 [Methanosphaera stadtmanae DSM 3091]
 gi|84372308|gb|ABC56578.1| ThiI [Methanosphaera stadtmanae DSM 3091]
          Length = 384

 Score = 64.2 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 52/187 (27%), Gaps = 24/187 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           S + L S G DS       L R  ++  L  D     K  +E      +++         
Sbjct: 176 SVVCLISSGIDSPVASFQMLKRGCKIILLHCDNNPYTKNTIEKVKKQAQRLQRY------ 229

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           S+G    L     G      + +              +     +     A  +A    I 
Sbjct: 230 SVGVKVKLYTINFGQYLEHVIKQAPPRMTCVLCKSGMYQTAAQLAKFNHANAIADGSSIG 289

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +         +    CR                  + + +PL+ L K E   +A+ IG 
Sbjct: 290 QVASQTLRNIEATRYKCR------------------MPIFSPLISLDKIEIEAIAKTIGT 331

Query: 190 QDLVNLI 196
            +   + 
Sbjct: 332 YETSIIP 338


>gi|20807693|ref|NP_622864.1| tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Thermoanaerobacter tengcongensis MB4]
 gi|24638309|sp|Q8RAH7|MNMA1_THETN RecName: Full=tRNA-specific 2-thiouridylase mnmA 1
 gi|20516242|gb|AAM24468.1| predicted tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase, contains the PP-loop ATPase domain
           [Thermoanaerobacter tengcongensis MB4]
          Length = 364

 Score = 64.2 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 57/198 (28%), Gaps = 17/198 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-----YGQRNKVELECRLCVRKK 59
           ++     ++  SGG DSS       ++   V  ++       YG+    + +   C  K 
Sbjct: 1   MEVNNRVVVGMSGGVDSSVTAYLLKEQGFEVIGVTMRVWVDPYGK--ARDDDKSCCSLKA 58

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           I +     +      + +    L ++ +  + K    +      PN  V     I     
Sbjct: 59  IHDAKKVAEILGIPHYTVN---LSEVFYDKIVKYFIDEYLKGRTPNPCVFCNRFIKFGDL 115

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPL 172
              A+ LG   I  G            R+                  L  E       PL
Sbjct: 116 LEKAHELGAYYIATGHYVRKEYDEDRKRYLLKKGLDFKKDQSYMLYRLTQEQLKHALFPL 175

Query: 173 MWLKKYETWKLAQDIGGQ 190
               K E   LA+ IG  
Sbjct: 176 GNYTKEEVRALAEKIGLP 193


>gi|154344038|ref|XP_001567963.1| thiamine biosynthesis-like protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134065297|emb|CAM40725.1| thiamine biosynthesis-like protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 795

 Score = 64.2 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 50/191 (26%), Gaps = 30/191 (15%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVEL 63
           I      L L SGG DS       + R   V  + F +        +E    + +++  +
Sbjct: 220 ITPNQRVLALISGGIDSPVAAYRMMTRGCLVNGVHFLNSTNDTASVMEKNRRICERLSSV 279

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
             ++     + H + ++ L              +I  N   +          L  AA   
Sbjct: 280 QGRF-----DMHYVDISTLQS------------QIVANVPNHNRTLIYKWFMLSLAAGF- 321

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
                         +             + +     L       V  PL+ + K      
Sbjct: 322 -----------DDSSFIVTGDSAGQVASQTVHNISTLYPTICKAVIAPLIGVTKNFIIDE 370

Query: 184 AQDIGGQDLVN 194
           A+ I   D   
Sbjct: 371 ARKINTFDFSI 381


>gi|160946673|ref|ZP_02093876.1| hypothetical protein PEPMIC_00631 [Parvimonas micra ATCC 33270]
 gi|158447057|gb|EDP24052.1| hypothetical protein PEPMIC_00631 [Parvimonas micra ATCC 33270]
          Length = 390

 Score = 64.2 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/181 (12%), Positives = 50/181 (27%), Gaps = 25/181 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS         R   +  + F                 +K+ +L     + +G+  +  
Sbjct: 188 IDSPVAGFVMGKRGMEIGAIHFH------SYPFTSERGEEKVKDLAKILSNYVGKFTMTS 241

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
           + +L           +  +I              I  +  A  LA +     ++ G    
Sbjct: 242 INLL----------PIQKEIASKCPEKEITILGRIFMMKIAEKLAIKQNYHALITGESLG 291

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
             +         +              +++  PL+ + K E   +A+ I   +   L  E
Sbjct: 292 QVASQTIQGITVVDKSTE---------ISILRPLIAMDKTEIIDIARTIDTYETSILPFE 342

Query: 199 E 199
           +
Sbjct: 343 D 343


>gi|281355523|ref|ZP_06242017.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Victivallis vadensis ATCC BAA-548]
 gi|281318403|gb|EFB02423.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Victivallis vadensis ATCC BAA-548]
          Length = 358

 Score = 64.2 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 57/187 (30%), Gaps = 7/187 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS     A      V  ++      +      +LC  K     +  
Sbjct: 1   MKEKVIVALSGGVDSSVAAVLAQQAGCEVIGVTLRLKHPDPEFSAAQLCASKNDEAAVES 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               LG +H      L       + +  A +      PN        I        A  +
Sbjct: 61  ICAKLGIEH--HYLELFPEFECKVLRPAAQEYARGRTPNPCCECNYRIKFGKLVEFARSV 118

Query: 127 GITNIVIGVCE---TDYSGYPDCRHDTIRAIETAINLGMESHVT--VHTPLMWLKKYETW 181
           G   ++ G           Y   R D ++  ++     ++  +   V  P+  + K E  
Sbjct: 119 GAAKVLTGHYAKLSEHGGVYELRRGDDLKKDQSYFLYRLDQAILSMVRFPVGAMDKGEVR 178

Query: 182 KLAQDIG 188
           ++A + G
Sbjct: 179 RIAAEYG 185


>gi|34762114|ref|ZP_00143122.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
           [Fusobacterium nucleatum subsp. vincentii ATCC 49256]
 gi|27888191|gb|EAA25249.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
           [Fusobacterium nucleatum subsp. vincentii ATCC 49256]
          Length = 343

 Score = 64.2 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 51/181 (28%), Gaps = 7/181 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKW 67
              ++  SGG DSS       ++   V  ++ +   + N  ++E    V  K+  +    
Sbjct: 2   KKVVIGMSGGVDSSVSAYLLKEQGYEVIGVTLNQHLEENSKDIEDAKKVCDKLGIIHKVV 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                 ++I+    L     + +T +  +   D           +     + A      G
Sbjct: 62  NIRKDFENIVIKYFLDG-YKTGITPSPCIICDDEIKFKILFDIADKYKAEYVA-----TG 115

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
               V                           L  +    +  PL    K E  ++A  I
Sbjct: 116 HYTSVEYSKIFSKYLLKSVHSIIKDQSYMLYRLSPDKLERLIFPLKSYSKQEIREIALKI 175

Query: 188 G 188
           G
Sbjct: 176 G 176


>gi|167762029|ref|ZP_02434156.1| hypothetical protein BACSTE_00375 [Bacteroides stercoris ATCC
           43183]
 gi|167700121|gb|EDS16700.1| hypothetical protein BACSTE_00375 [Bacteroides stercoris ATCC
           43183]
          Length = 401

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 55/193 (28%), Gaps = 13/193 (6%)

Query: 5   IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           ++K    ++ FSGG D S T +  A ++   V     + G  +  +L+       K+  +
Sbjct: 1   MEKKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSPEQLKTNEENAYKLGAV 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                        + L +  +    SL   V   +  N      V    I   +  A  A
Sbjct: 61  -----------KYITLDVTQEYYEKSLKYMVFGNVLRNGTYPISVSSERIFQALAIARYA 109

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM-WLKKYETWK 182
             +G   I  G                + A    I              + +L K+    
Sbjct: 110 NEIGADAIAHGSTGAGNDQIRFDMTFLVMAPGVEIITLTRDMALSRQEEIDYLNKHGFAA 169

Query: 183 LAQDIGGQDLVNL 195
               +     V L
Sbjct: 170 DFAKLKYSYNVGL 182


>gi|27904738|ref|NP_777864.1| tRNA-specific 2-thiouridylase MnmA [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
 gi|29428172|sp|P59460|MNMA_BUCBP RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|27904135|gb|AAO26969.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Buchnera aphidicola str. Bp (Baizongia pistaciae)]
          Length = 370

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 51/189 (26%), Gaps = 7/189 (3%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + K     ++  SGG DSS        +   VE L     + +  + +     +K + + 
Sbjct: 1   MYKLNKKVIVAMSGGVDSSVTAWILKKKGYHVEGLFMKNWEEHNSDSDMHCSSKKDLSDA 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      H +  +   +   +   K +             +  + I F +F     
Sbjct: 61  QGVCNQLNIFLHKVNFSF--EYWENVFQKFLFEYKMGRTPNPDVLCNKEIKFKIFFEYSI 118

Query: 124 YRLGITNIVIGVCETDYSGYPDC---RHDTIRAIETAINLGMESHVTVHTPLM--WLKKY 178
             L    I  G               R       ++     +   V          L K 
Sbjct: 119 QDLQAHYIATGHYVQKRIFKNKYFLLRGLDATKDQSYFLYTINQKVLKQCLFPIGHLTKC 178

Query: 179 ETWKLAQDI 187
           E  K+A+ I
Sbjct: 179 EVRKIARRI 187


>gi|254478804|ref|ZP_05092171.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Carboxydibrachium pacificum DSM 12653]
 gi|214035259|gb|EEB75966.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Carboxydibrachium pacificum DSM 12653]
          Length = 376

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 62/203 (30%), Gaps = 13/203 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL---CVRK 58
           N  ++K    ++  SGG DSS       ++   V  ++    Q    E        C   
Sbjct: 10  NLSMQKNNRVVVGMSGGVDSSVAAYLLKEQGYEVIGVTMQIWQDKDEEAVRVEGGCCSLA 69

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
            + +          + +++    +          +  ++ +  N     +     I    
Sbjct: 70  AVNDARRVANKIGIKYYVMNFKDVFKEKVIDYFVDEYLRGRTPNPC---IACNKYIKFEE 126

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA-------INLGMESHVTVHTP 171
               A+ +    +  G            R+   ++++T+        NL       +  P
Sbjct: 127 LLKRAWMIDAYYVATGHYAIKEYDEERGRYLLKKSVDTSKDQTYVLYNLTQTQLEHILFP 186

Query: 172 LMWLKKYETWKLAQDIGGQDLVN 194
           L   KK E  +LA+++G      
Sbjct: 187 LGKYKKDEVRELAKNLGLPVASK 209


>gi|300855514|ref|YP_003780498.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium ljungdahlii DSM 13528]
 gi|300435629|gb|ADK15396.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium ljungdahlii DSM 13528]
          Length = 358

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 55/216 (25%), Gaps = 10/216 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK-KIVELMP 65
                ++  SGG DSS       ++   V  ++    Q +K              V+   
Sbjct: 1   MNKKVVVGMSGGVDSSVAAYLLKEQGYEVIGVTMQVWQDDKYYEGMEGGCCSLSAVDDAR 60

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
               +LG  + +      +     +      +      PN  V     I        A  
Sbjct: 61  LVAYNLGIPYYVM--NFRNEFKKCVIDYFIDEYTKGRTPNPCVACNKYIKFDELLKRAMD 118

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK-----KYET 180
           LG   +  G   T             +  +      + +          +      K + 
Sbjct: 119 LGADYVATGHYATVEKVNDRYVLKKSKDSKKDQTYALYNLTQFQLEHTLMPCGIYKKEQI 178

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGY 216
            ++A+ IG         EE   C++   D       
Sbjct: 179 REIAKKIGLAVHNKKDSEEI--CFIPDNDHGSYIKR 212


>gi|225376291|ref|ZP_03753512.1| hypothetical protein ROSEINA2194_01929 [Roseburia inulinivorans DSM
           16841]
 gi|225211937|gb|EEG94291.1| hypothetical protein ROSEINA2194_01929 [Roseburia inulinivorans DSM
           16841]
          Length = 358

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/223 (12%), Positives = 53/223 (23%), Gaps = 14/223 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN---KVELECRLCVRKKIVEL 63
            A   ++  SGG DSS        +   V  ++    Q       E     C    + + 
Sbjct: 1   MAKKVVVGMSGGVDSSVAAYLLKKQGYDVIGVTMQIWQDEDEFTQEKNGGCCGLSAVNDA 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      +++           ++      +      PN  +     +        +
Sbjct: 61  RRVADRLEIPYYVMN---FKQEFKKNVMDYFTAEYLKGRTPNPCIACNRYVKWEALLDRS 117

Query: 124 YRLGITNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
             +G   I  G                +             NL          P+    K
Sbjct: 118 LAIGADYIATGHYARVEQLPNGRYAIKNSVTAEKDQTYALYNLTQTQLSRTLMPVGDYHK 177

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNS 220
            E  ++A++IG          E   C++   D        C  
Sbjct: 178 DEIRQIAEEIGLMVAHKKDSMEI--CFIPDDDYAGFIDKECGK 218


>gi|237743285|ref|ZP_04573766.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium sp. 7_1]
 gi|229433064|gb|EEO43276.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium sp. 7_1]
          Length = 343

 Score = 63.8 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 52/181 (28%), Gaps = 7/181 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKW 67
              ++  SGG DSS       ++   V  ++ +   + N  ++E    V  K+  +    
Sbjct: 2   KKVVIGMSGGVDSSVSAYLLKEQGYEVIGVTLNQHLEENSKDIEDAKKVCDKLEMIHKVV 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                 ++I+    L     S  T +  +   D           +     + A      G
Sbjct: 62  NIRKDFENIVIKYFLDG-YKSGKTPSPCVICDDEIKFKILFDIADKYKTEYVA-----TG 115

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
               V    + D                    L  +    +  PL    K E  ++A  I
Sbjct: 116 YYTSVEYSKDFDKYLLKSVHSIIKDQSYMLYRLSPDKLERLIFPLKDYSKQEIREIALKI 175

Query: 188 G 188
           G
Sbjct: 176 G 176


>gi|326201928|ref|ZP_08191798.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium papyrosolvens DSM 2782]
 gi|325987723|gb|EGD48549.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium papyrosolvens DSM 2782]
          Length = 359

 Score = 63.8 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 56/191 (29%), Gaps = 13/191 (6%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL---CVRKKIVELM 64
               +L  SGG DSS   +  L +   V  ++    Q    E +      C    + +  
Sbjct: 3   PKKVMLGMSGGVDSSVAAAILLKQGYEVIGVTLQIWQDMDEERQKSEGGCCSLSAVDDAR 62

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     ++L      DI + ++ +    +      PN  +     +        A 
Sbjct: 63  RVANKLGIPYYVLN---FKDIFNKTVIEYFKEEYFKGRTPNPCIACNRHVKWQAMLDKAL 119

Query: 125 RLGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWLKK 177
            +GI  I  G            R        D         NL  +       P+    K
Sbjct: 120 SMGIDYIATGHYAKVMQDAKTGRFILKKSVTDRKDQTYALYNLTQQQLSHTLMPVGDYTK 179

Query: 178 YETWKLAQDIG 188
            E  ++A++IG
Sbjct: 180 DEIREIAKEIG 190


>gi|257413240|ref|ZP_04742446.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Roseburia intestinalis L1-82]
 gi|257204162|gb|EEV02447.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Roseburia intestinalis L1-82]
 gi|291539633|emb|CBL12744.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Roseburia intestinalis XB6B4]
          Length = 363

 Score = 63.8 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 61/227 (26%), Gaps = 13/227 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M   +  A   ++  SGG DSS       ++   V  ++    Q     ++        +
Sbjct: 1   MEKRM-AAKKVVVGMSGGVDSSVAAYLLKEQGYDVIGVTMQIWQDEDEFVQEESGGCCGL 59

Query: 61  VEL--MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
             +    +  D LG  + +           ++      +      PN  +     +    
Sbjct: 60  SAVDDARRVADRLGIPYYVM--NFKQEFKKNVMDYFTAEYLKGRTPNPCIACNRYVKWEA 117

Query: 119 AATLAYRLGITNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
               +  +G   I  G                +             NL  E       P+
Sbjct: 118 LLNRSLAIGADYIATGHYARIEQLSNGRYAIKNSVTAVKDQTYALYNLTQEQLSHTLMPV 177

Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCN 219
               K E  K+A++IG         +E   C++   D        C 
Sbjct: 178 GAYHKDEIRKIAEEIGLMVAHKKDSQEI--CFISDNDYAGFIDRECG 222


>gi|148377398|ref|YP_001256274.1| thiamine biosynthesis protein thiI [Mycoplasma agalactiae PG2]
 gi|238686659|sp|A5IXS0|THII_MYCAP RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|148291444|emb|CAL58829.1| Thiamine biosynthesis protein thiI [Mycoplasma agalactiae PG2]
          Length = 378

 Score = 63.8 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 59/187 (31%), Gaps = 25/187 (13%)

Query: 14  LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
           L SGG DS       + R  +V  LSF          +       KI +L+       G+
Sbjct: 171 LMSGGIDSPVAAFKLMKRGLKVSFLSF------ISPPQTDEKTIGKIKDLVSVLSKYQGK 224

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
            H+        +++ S T N +            +      F   A+  A    I  +  
Sbjct: 225 SHLYLANYSKLMNYISFTSNES----------YRINLMRRSFYRIASKFAKGKNIMTLSN 274

Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
           G      +        TI +    +         +  PL+   K ET  +A+ I   D+ 
Sbjct: 275 GENLGQVASQTIESLSTIASASDLL---------ILRPLIANDKVETINIAKQIKTYDIS 325

Query: 194 NLILEES 200
               +E+
Sbjct: 326 IEKAKET 332


>gi|157875044|ref|XP_001685929.1| thiamine biosynthesis-like protein [Leishmania major]
 gi|68129002|emb|CAJ06434.1| thiamine biosynthesis-like protein [Leishmania major strain
           Friedlin]
          Length = 795

 Score = 63.8 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 53/191 (27%), Gaps = 30/191 (15%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVEL 63
           I      L L SGG DS       + R   V  + F +        +E    + +++  L
Sbjct: 220 ITPDQRVLALISGGIDSPVAAYRMMTRGCLVSGVHFLNSTNDTASVVEKNRRICERLSSL 279

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
             ++       H + ++ L              +I  N   +          L  AA+  
Sbjct: 280 QGRFN-----MHYVDISTLQS------------QIVANVPNHNRTLIYKWFMLSLAASF- 321

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
                  IV G      +          + +     L       V  PL+ + K      
Sbjct: 322 --DDSCFIVTGDSAGQVAS---------QTVHNISTLYPTFCKAVIAPLIGVTKNFIIDE 370

Query: 184 AQDIGGQDLVN 194
           A+ I   D   
Sbjct: 371 ARKINTFDFSI 381


>gi|237739846|ref|ZP_04570327.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium sp. 2_1_31]
 gi|229423454|gb|EEO38501.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium sp. 2_1_31]
          Length = 343

 Score = 63.8 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 50/181 (27%), Gaps = 7/181 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKW 67
              ++  SGG DSS       ++   V  ++ +   + N  ++E    V  ++  +    
Sbjct: 2   KKVVIGMSGGVDSSVSAYLLKEQGYEVIGVTLNQHLEENSKDIEDAKKVCDRLGIIHEVV 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                 ++I+    L     S  T +  +   D           +     + A      G
Sbjct: 62  NIRKDFENIVIKYFLDG-YKSGKTPSPCVICDDEIKFKILFEIADKYKADYVA-----TG 115

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
               V                           L  E    +  PL    K E  ++A  I
Sbjct: 116 HYTSVEYSETFSKYLLKSVHSIIKDQSYMLYRLAPEKLERLIFPLKPYSKQEIREIALKI 175

Query: 188 G 188
           G
Sbjct: 176 G 176


>gi|225388352|ref|ZP_03758076.1| hypothetical protein CLOSTASPAR_02087 [Clostridium asparagiforme
           DSM 15981]
 gi|225045595|gb|EEG55841.1| hypothetical protein CLOSTASPAR_02087 [Clostridium asparagiforme
           DSM 15981]
          Length = 361

 Score = 63.8 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 67/227 (29%), Gaps = 11/227 (4%)

Query: 5   IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +    +++  SGG DSS        +  RV  ++    Q    +++        +  +
Sbjct: 1   MSEEKKTVVVGMSGGVDSSVAAYLLKQQGYRVIGVTMQIWQDEDGDVQEEQGGCCGLSAV 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
               + ++  +    +          +    A +  +   PN  +     +        +
Sbjct: 61  DDARRVAMQLEIPYYVMNFKQEFREHVMDYFAGEYLEGRTPNPCIACNRYVKWESLLRRS 120

Query: 124 YRLGITNIVIGVCETDYS---GYPDCRHDTIRAIETAINLGMESHVTVHTPLMW---LKK 177
             +G   I  G          G    R     A +    L   +   +   LM      K
Sbjct: 121 IAIGADYIATGHYARIERLENGRFALRRSVTEAKDQTYALYNLTQEQLSRTLMPVGSYHK 180

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPAC 224
            E  ++A++IG         +E   C++  +D             +C
Sbjct: 181 DEIRRMAEEIGLNVAHKPDSQEI--CFVPDKDYASFIEDYTGK--SC 223


>gi|157736745|ref|YP_001489428.1| tRNA-specific 2-thiouridylase MnmA [Arcobacter butzleri RM4018]
 gi|205810156|sp|A8ES35|MNMA1_ARCB4 RecName: Full=tRNA-specific 2-thiouridylase mnmA 1
 gi|157698599|gb|ABV66759.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Arcobacter butzleri RM4018]
          Length = 345

 Score = 63.8 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 48/181 (26%), Gaps = 10/181 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS       +    VE +      R     E  L   + + + +   
Sbjct: 3   KKKVMVGMSGGIDSSVTAYMLQNEGYEVEGIYLKLHNRTDGYHEKNLGYIEDVAKFLNI- 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                + +IL LA            +          PN  V     I        A + G
Sbjct: 62  -----KYYILDLADKFSKEVYDYFVDS---YLTGTTPNPCVKCNRQIKFGAMLDFAKQHG 113

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE-TWKLAQD 186
            + +  G        +     D  +     ++   +  +      +   K E   K    
Sbjct: 114 ASYLATGHYAKTDGKFFYEADDKTKDQSYFLSQVDKDALKYMMFPLSTYKKEDIVKFGAK 173

Query: 187 I 187
           +
Sbjct: 174 L 174


>gi|319898474|ref|YP_004158567.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bartonella clarridgeiae 73]
 gi|319402438|emb|CBI75979.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bartonella clarridgeiae 73]
          Length = 409

 Score = 63.8 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 46/188 (24%), Gaps = 9/188 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
           +    ++  SGG DSS            V  ++   Y            C  + I +   
Sbjct: 13  ENSRIVVAMSGGVDSSVVAGLLKKEGYDVVGITLQLYDHGAATHRVGACCAGQDIEDARR 72

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +      +IL      +    ++    A        P   V     +        AY 
Sbjct: 73  VAETLGVPHYILD---YEERFREAVINPFAESYAHGETPVPCVSCNQTVKFADLLATAYE 129

Query: 126 LGITNI---VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYET 180
           LG   +            +     R       ++            +       L K   
Sbjct: 130 LGADALATGHYIRSRVHGAHRALFRPLDADRDQSYFLFATTQEQIDYLRFPLGDLSKDRV 189

Query: 181 WKLAQDIG 188
            ++A ++G
Sbjct: 190 REIATEMG 197


>gi|309390031|gb|ADO77911.1| thiamine biosynthesis/tRNA modification protein ThiI [Halanaerobium
           praevalens DSM 2228]
          Length = 405

 Score = 63.4 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 50/180 (27%), Gaps = 25/180 (13%)

Query: 20  DSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPL 79
           DS      AL R   +  + F+               ++K+++L        G   +   
Sbjct: 203 DSPVAGWLALKRGLTLNAVYFN------SPPYTSARAKQKVIDLAKTLSLYGGTIKL--- 253

Query: 80  AILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETD 139
                         +  +I         V     + +  A  LA       ++ G     
Sbjct: 254 -------QIPYFTEIQQQILKKCPQRYTVTIMRRMMIRIANKLAKINNEQALITGESLGQ 306

Query: 140 YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEE 199
            +        +   I           + V  PL+ + K E  KLA+ I   ++     E+
Sbjct: 307 VASQTIEGLHSSNEIAE---------LPVLRPLITMDKNEIIKLAKKIDTYEISIRPHED 357


>gi|239626056|ref|ZP_04669087.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridiales bacterium 1_7_47_FAA]
 gi|239520286|gb|EEQ60152.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridiales bacterium 1_7_47FAA]
          Length = 358

 Score = 63.4 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 52/190 (27%), Gaps = 6/190 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +   ++  SGG DSS        +   V  ++    Q    +++        +  +   
Sbjct: 1   MSKKVVVGMSGGVDSSVAAWLLKQQGYDVIGVTMQIWQDEDTDVQEAEGGCCGLSAVDDA 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            + ++       +    +   +++      +      PN  +     +        +  +
Sbjct: 61  RRVAMDLGIPYYVMNFKEEFRTNVMDYFVGEYVAGRTPNPCIACNRYVKWESLLRRSMAI 120

Query: 127 GITNIVIGVCETDYSGY------PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           G   I  G                              NL  E       P+    K E 
Sbjct: 121 GADYIATGHYAQICQLPSGRYALKTSVTAQKDQTYALYNLTQEQLARTLMPVGSYHKDEI 180

Query: 181 WKLAQDIGGQ 190
            ++A+DIG Q
Sbjct: 181 RRMAEDIGLQ 190


>gi|319406809|emb|CBI80442.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bartonella sp. 1-1C]
          Length = 409

 Score = 63.4 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 47/188 (25%), Gaps = 9/188 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
           K    ++  SGG DSS            V  ++   Y            C  + I +   
Sbjct: 13  KNSRVVVAMSGGVDSSVVAGLLKKEGYDVVGITLQLYDHGAATHRVGACCAGQDIEDARR 72

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +      +IL      +    ++    A        P   V     +      T AY 
Sbjct: 73  VAETLGVPHYILD---YEERFREAVINPFAESYAHGETPIPCVSCNQTVKFSDLLTTAYE 129

Query: 126 LGITNI---VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYET 180
           LG   +            +     R       ++            +       L K   
Sbjct: 130 LGADALATGHYIRSRVHGAHRALFRSLDADRDQSYFLFATTQEQIDYLRFPLGDLSKERV 189

Query: 181 WKLAQDIG 188
            ++A ++G
Sbjct: 190 REIATEMG 197


>gi|262066347|ref|ZP_06025959.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium periodonticum ATCC 33693]
 gi|291379911|gb|EFE87429.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium periodonticum ATCC 33693]
          Length = 343

 Score = 63.4 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 50/181 (27%), Gaps = 7/181 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKW 67
              ++  SGG DSS       ++   V  ++ +   + +  ++E    V  ++  +    
Sbjct: 2   KKVVIGMSGGVDSSVSAYLLKEQGYEVIGVTLNQHLEESSKDIEDAKKVCDRLGIIHEVV 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                 ++I+    L     S  T +  +   D           N     + A      G
Sbjct: 62  NIRKNFENIVIKYFLDG-YKSGKTPSPCVICDDEIKFKILFEVANKYKADYVA-----TG 115

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
               V                           L  E    +  PL    K E  ++A  I
Sbjct: 116 HYTSVEYSETFSKYLLKSVHSIIKDQSYMLYRLAPEKLERLIFPLKPYSKQEIREIALKI 175

Query: 188 G 188
           G
Sbjct: 176 G 176


>gi|260597502|ref|YP_003210073.1| tRNA-specific 2-thiouridylase MnmA [Cronobacter turicensis z3032]
 gi|260216679|emb|CBA30030.1| tRNA-specific 2-thiouridylase mnmA [Cronobacter turicensis z3032]
          Length = 369

 Score = 63.4 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 55/192 (28%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +VE L     + +  E  C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEDYC--TAASDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +A            +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIELHTVN--FAAEYWDNVFEHFLAEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G            R                 LG +       P+  L
Sbjct: 115 FAAEDLGADYIATGHYVRRADVNGKSRLLRGLDGNKDQSYFLYTLGHDQVAQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K E  ++A+++
Sbjct: 175 EKPEVRRIAEEL 186


>gi|146097919|ref|XP_001468259.1| thiamine biosynthesis-like protein [Leishmania infantum]
 gi|134072626|emb|CAM71341.1| thiamine biosynthesis-like protein [Leishmania infantum JPCM5]
 gi|322502238|emb|CBZ37321.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 795

 Score = 63.4 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 53/191 (27%), Gaps = 30/191 (15%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVEL 63
           I      L L SGG DS       + R   V  + F +        +E    + +++  +
Sbjct: 220 ITPDQRVLALISGGIDSPVAAYRMMTRGCLVNGVHFLNSTNDTASVMEKNRRICERLSSV 279

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
             +      + H + ++ L              +I  N   +          L  AA+  
Sbjct: 280 QGRL-----DMHYVDISTLQS------------QIVANVPNHNRTLIYKWFMLSLAASF- 321

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
                  IV G      +          + +     L       V  PL+ + K      
Sbjct: 322 --DDSCFIVTGDSAGQVAS---------QTVHNISTLYPTVCKAVIAPLIGVTKNFIIDE 370

Query: 184 AQDIGGQDLVN 194
           A+ I   D   
Sbjct: 371 ARKINTFDFSI 381


>gi|294783066|ref|ZP_06748390.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium sp. 1_1_41FAA]
 gi|294479944|gb|EFG27721.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium sp. 1_1_41FAA]
          Length = 343

 Score = 63.4 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 51/181 (28%), Gaps = 7/181 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKW 67
              ++  SGG DSS       ++   V  ++ +   + N  ++E    V  ++  +    
Sbjct: 2   KKVVIGMSGGVDSSVSAYLLKEQGYEVIGVTLNQHLEENSKDIEDAKKVCDRLGIIHEVV 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                 ++I+    L D   S  T +  +   D           +     + A      G
Sbjct: 62  NIRKDFENIVIKYFL-DGYKSGKTPSPCVICDDEIKFKILFEIADKYKADYVA-----TG 115

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
               V                           L  E    +  PL    K E  ++A  I
Sbjct: 116 HYTSVEYSETFSKYLLKSVHSIIKDQSYILYRLAPEKLERLIFPLKPYSKQEIREIALKI 175

Query: 188 G 188
           G
Sbjct: 176 G 176


>gi|239994884|ref|ZP_04715408.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Alteromonas macleodii ATCC 27126]
          Length = 369

 Score = 63.4 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 41/140 (29%), Gaps = 5/140 (3%)

Query: 1   MNDIIKK-APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           M+DI    +   ++  SGG DSS        +  +VE L     + +  +  C     + 
Sbjct: 1   MSDIESNASKKVIVGMSGGVDSSVSAYLLQQQGYQVEGLFMKNWEEDDNDEYCA--AAED 58

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           + +          E H +      +   +     +             +  + I F  F 
Sbjct: 59  LKDAQAVADKLGIELHTIN--FAAEYWDNVFEYFLEEYKAGRTPNPDIMCNKEIKFKAFL 116

Query: 120 ATLAYRLGITNIVIGVCETD 139
              A  LG   I  G     
Sbjct: 117 EFAAEDLGADYIATGHYVRR 136


>gi|331269731|ref|YP_004396223.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum BKT015925]
 gi|329126281|gb|AEB76226.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum BKT015925]
          Length = 346

 Score = 63.4 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 52/187 (27%), Gaps = 20/187 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                 +  SGG DSS       ++   +  ++      +  E      V +K+      
Sbjct: 1   MNKKVAIGLSGGVDSSVAAYLLKEKGYDLIGITMKVSDVDVSED--AAKVAEKLD----- 53

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL    L D   + +  N A +      PN        I        A  L
Sbjct: 54  -----IPYHILD---LRDEFKNRVIDNFAEEYLQGRTPNPCAMCNKYIKFGVLLEKAKEL 105

Query: 127 GITNIVIGVCETDYSGYPDC-----RHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           G   I  G                 + D         +L  +    +  P     K +  
Sbjct: 106 GADYIATGHYARVEEHNGRYLVLNAKDDKKDQTYMFYSLTQDVLKHILMPCGEYTKVQIR 165

Query: 182 KLAQDIG 188
           ++A+++G
Sbjct: 166 EIARNLG 172


>gi|256846579|ref|ZP_05552036.1| tRNA methyl transferase [Fusobacterium sp. 3_1_36A2]
 gi|294784166|ref|ZP_06749467.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium sp. 3_1_27]
 gi|256718348|gb|EEU31904.1| tRNA methyl transferase [Fusobacterium sp. 3_1_36A2]
 gi|294488236|gb|EFG35581.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium sp. 3_1_27]
          Length = 343

 Score = 63.4 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 51/181 (28%), Gaps = 7/181 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKW 67
              ++  SGG DSS       ++   V  ++ +   + N  ++E    V  K+       
Sbjct: 2   KKVVIGMSGGVDSSVSAYLLKEQGYEVIGVTLNQHLEENSKDIEDAKKVCNKLGISHEVI 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                 ++I+    L     S +T +  +   D           +     + A      G
Sbjct: 62  NIRKDFENIVIKYFLDG-YSSGITPSPCVICDDEIKFKILFDIADKYKAEYVA-----TG 115

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
               V                           +  +    +  PL    K+E  ++A  I
Sbjct: 116 HYTSVEYSEIFSKYLLKSVHSIIKDQSYMLYRISPDKLERLIFPLKPYTKHEIREIALKI 175

Query: 188 G 188
           G
Sbjct: 176 G 176


>gi|313678265|ref|YP_004056005.1| thiamine biosynthesis/tRNA modification protein ThiI [Mycoplasma
           bovis PG45]
 gi|312950670|gb|ADR25265.1| thiamine biosynthesis/tRNA modification protein ThiI [Mycoplasma
           bovis PG45]
          Length = 378

 Score = 63.4 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 63/187 (33%), Gaps = 25/187 (13%)

Query: 14  LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
           L SGG DS       + R  RV  +SF          +       KI  L+       G+
Sbjct: 171 LMSGGIDSPVAAFELMKRGLRVHFISF------VSPPQTDEKTINKIKSLVSVLSKYQGK 224

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
            ++        +++ S T N A            +      F   A+  A +  I  +  
Sbjct: 225 SNLYLANYSKLMNYISFTSNEA----------YKINLMRRSFYRIASKFAKKQNIIVLSN 274

Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
           G      +          + IE+   +   S + +  P++   K ET  +A+ IG  D+ 
Sbjct: 275 GENLGQVAS---------QTIESLSTIANASDLLILRPILANDKIETINIAKHIGTYDIS 325

Query: 194 NLILEES 200
               +E+
Sbjct: 326 IEKAKET 332


>gi|27382106|ref|NP_773635.1| tRNA-specific 2-thiouridylase MnmA [Bradyrhizobium japonicum USDA
           110]
 gi|81735060|sp|Q89ES7|MNMA_BRAJA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|27355276|dbj|BAC52260.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Bradyrhizobium japonicum USDA 110]
          Length = 393

 Score = 63.4 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 48/186 (25%), Gaps = 10/186 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSST  +        V  ++   Y        +   C  + I +      
Sbjct: 15  RVVVAMSGGVDSSTTAALLKAEGYDVVGITLQLYDHGAATHRKGACCAGQDIHDARDVAA 74

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           S+  N A        P   +     I        A  LG 
Sbjct: 75  KLGIPHYVLDYED---RFRESVIDNFADSYALGETPVPCIECNRSIKFRDLLKTARELGA 131

Query: 129 TNIVIGVCETDYSGYPDCR------HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
             +  G            R                     E    +  PL  + K ET +
Sbjct: 132 QALATGHYVASRRLDDGSRVLVCAADADRDQSYFLFATTQEQLDYLRFPLGDMTKPETRE 191

Query: 183 LAQDIG 188
           LA+  G
Sbjct: 192 LARRFG 197


>gi|108804192|ref|YP_644129.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rubrobacter xylanophilus DSM 9941]
 gi|123177389|sp|Q1AWB1|MNMA_RUBXD RecName: Full=Bifunctional protein nifU/mnmA; Includes: RecName:
           Full=NifU-like protein; Includes: RecName:
           Full=tRNA-specific 2-thiouridylase mnmA
 gi|108765435|gb|ABG04317.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rubrobacter xylanophilus DSM 9941]
          Length = 488

 Score = 63.4 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 61/180 (33%), Gaps = 7/180 (3%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            +   SGG DS+       +R   V  ++F     +  E   R C     V    +    
Sbjct: 146 VVAAMSGGVDSAVTALLLKERGYEVVAVTFR---LHDGEPGSRSCCSPDTVLFARETAHG 202

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG  H      L ++    + ++          PN  V     +    AA LA RLG+ +
Sbjct: 203 LGIPHF--TLNLRELFDRRVMRDFVGSYAAGRTPNPCVACNAHVKFHAAAFLADRLGLRH 260

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETA--INLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
           +  G       G    R +  R  +T     +          PL   +K E  ++A++ G
Sbjct: 261 VATGHYARVGEGPCLERPEDGRKDQTYVLWPVPPRLLGRTIFPLGDYRKSEVRRIAEERG 320


>gi|156934382|ref|YP_001438298.1| tRNA-specific 2-thiouridylase MnmA [Cronobacter sakazakii ATCC
           BAA-894]
 gi|166234851|sp|A7MFV2|MNMA_ENTS8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|156532636|gb|ABU77462.1| hypothetical protein ESA_02213 [Cronobacter sakazakii ATCC BAA-894]
          Length = 369

 Score = 63.4 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 55/192 (28%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +VE L     + +  E  C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEDYC--TAASDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +A            +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIELHTVN--FAAEYWDNVFEHFLAEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G            R                 LG +       P+  L
Sbjct: 115 FAAEDLGADYIATGHYVRRADVDGKSRLLRGLDGNKDQSYFLYTLGHDQVAQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K E  ++A+++
Sbjct: 175 EKPEVRRIAEEL 186


>gi|49474501|ref|YP_032543.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bartonella quintana str. Toulouse]
 gi|81646912|sp|Q6FZ46|MNMA_BARQU RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|49240005|emb|CAF26420.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bartonella quintana str. Toulouse]
          Length = 408

 Score = 63.4 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/187 (11%), Positives = 44/187 (23%), Gaps = 9/187 (4%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPK 66
               ++  SGG DSS            V  ++   Y            C  + I +    
Sbjct: 14  NSRIVVAMSGGVDSSVVAGLLKKEGYDVIGITLQLYDHGAATHRVGACCAGQDIEDARRV 73

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +      ++L           ++    A        P   V     +        A  L
Sbjct: 74  AETLGIPHYVLD---YEKRFREAVIDPFAESYAHGETPVPCVACNQTVKFADLLATAREL 130

Query: 127 GITNI---VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYETW 181
           G   +            +     R   +   ++            +       L K    
Sbjct: 131 GADALATGHYIRSRPHGAHRALFRPFDVERDQSYFLFATTQEQIDYLRFPLGDLPKAHVR 190

Query: 182 KLAQDIG 188
           ++A ++G
Sbjct: 191 EIATEMG 197


>gi|284164950|ref|YP_003403229.1| thiamine biosynthesis protein [Haloterrigena turkmenica DSM 5511]
 gi|284014605|gb|ADB60556.1| thiamine biosynthesis protein [Haloterrigena turkmenica DSM 5511]
          Length = 392

 Score = 63.4 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 56/180 (31%), Gaps = 24/180 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           A+ L SGG DS       + R   +     D G    ++ E      + +  L     + 
Sbjct: 187 AVALVSGGIDSPVAAYEIMKRGSPIVPAYVDLGDYGGIDHEA--RAMETVRLLSEYAPNF 244

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
             + + +P             + V + +++ +        R           A R+    
Sbjct: 245 DMDVYRIP-----------GGETVDLLVREMDKGRMLSLRRFFYRAAETL--AERVDAHG 291

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S          + ++        + + +H PL+   K +    A++IG  
Sbjct: 292 IVTGEAVGQKSS---------QTLQNLGVTSRAADLPIHRPLLTRDKQDIVAQAREIGTF 342


>gi|196232683|ref|ZP_03131534.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chthoniobacter flavus Ellin428]
 gi|196223143|gb|EDY17662.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chthoniobacter flavus Ellin428]
          Length = 363

 Score = 63.4 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 57/211 (27%), Gaps = 11/211 (5%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
            SGG DSS        +   V  ++   + Q      E + C  + I +           
Sbjct: 1   MSGGVDSSVAAYLLKRQGYDVVGVTMKVWPQDCISRAEDKCCGPQAIADARGVAHALGVP 60

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
            +++     G+     +      + ++   PN  V     +        A  LG   I  
Sbjct: 61  HYVVDE---GENFERLVIDYFTEEYKNGRTPNPCVMCNEKVKFGNLWGKAKALGAEYIAT 117

Query: 134 GVCETDYSGYPDC-----RHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
           G                 R           +L          PL  + K E   +A+ +G
Sbjct: 118 GHYAIIEHHADRAVLRKGRDPRKDQSYFLFSLRQAQLQHAICPLGEMSKPEIRAIARQLG 177

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCN 219
            +       +E   C++   D +        
Sbjct: 178 LKVAEKEDSQEI--CFVPGNDYKAFLKSHMG 206


>gi|188534099|ref|YP_001907896.1| tRNA-specific 2-thiouridylase MnmA [Erwinia tasmaniensis Et1/99]
 gi|188029141|emb|CAO97013.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Erwinia tasmaniensis Et1/99]
          Length = 369

 Score = 63.4 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 50/189 (26%), Gaps = 9/189 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +       ++  SGG DSS        +  +VE L     + +  E  C     + + + 
Sbjct: 1   MSNSQKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAEDLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      H +      +   +     +             +  + I F  F    A
Sbjct: 59  QAVCDKLGIYLHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 LG E       P+  L K 
Sbjct: 117 EDLGADYIATGHYVRRQDVDGKSRLLRGLDGNKDQSYFLYTLGHEQIAQSLFPVGELAKP 176

Query: 179 ETWKLAQDI 187
           E  ++A+ +
Sbjct: 177 EVRRIAEQL 185


>gi|322494670|emb|CBZ29972.1| thiamine biosynthesis-like protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 795

 Score = 63.4 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 55/191 (28%), Gaps = 30/191 (15%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVEL 63
           I      L L SGG DS       + R   V  + F +        +E    + +++  +
Sbjct: 220 ITPDQRVLALISGGIDSPVAAYRMMTRGCLVNGVHFLNSTNDTASVVEKNRRICERLSTV 279

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
             ++     + H + ++ L              +I  N   +          L  AA+  
Sbjct: 280 QGRF-----DMHYVDISTLQS------------QIVANVPNHNRTLIYKWFMLSLAASF- 321

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
                  IV G      +          + +     L       V  PL+ + K      
Sbjct: 322 --DDSCFIVTGDSAGQVAS---------QTVHNISTLYPTICKAVIAPLIGVTKNFIIDE 370

Query: 184 AQDIGGQDLVN 194
           A+ I   DL  
Sbjct: 371 ARKINTFDLSI 381


>gi|205822022|sp|A8H5M1|MNMA_SHEPA RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 371

 Score = 63.0 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 52/185 (28%), Gaps = 9/185 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS      + +  +VE L     + +  +  C       + +      
Sbjct: 11  KKVIVGMSGGVDSSVSAYLLMKQGYQVEGLFMKNWEEDDTDEYCA--AADDLKDAQAVCD 68

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + H +      +   +     +A            +  + I F  F       L  
Sbjct: 69  KLGIKLHTVN--FASEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFADEILDA 126

Query: 129 TNIVIGVCETDYSGYPDCRH-----DTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             I +G            +                 LG E       P+  L K E  ++
Sbjct: 127 DYIAMGHYVRRRDIDGTSQMLRGVDGNKDQSYFLYTLGYEQVARSLFPVGELDKSEVREI 186

Query: 184 AQDIG 188
           A+++G
Sbjct: 187 AKEMG 191


>gi|322370407|ref|ZP_08044966.1| thiamine biosynthesis protein ThiI [Haladaptatus paucihalophilus
           DX253]
 gi|320550115|gb|EFW91770.1| thiamine biosynthesis protein ThiI [Haladaptatus paucihalophilus
           DX253]
          Length = 389

 Score = 63.0 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 52/187 (27%), Gaps = 24/187 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L SGG DS       + R   V  +  D G      ++ R    + + +L     +
Sbjct: 183 KLVSLVSGGIDSPVATWEVMKRGSPVIPVYLDLGD--YGGIDHRARAVETVRKLAKYAPE 240

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                  +P             + + +  ++       V  R +  +             
Sbjct: 241 QDMRVRKVP-----------AGEAMTLLGEEVGPARMLVFRRFMYRVAEHIAREES--AH 287

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      S                  +G  + + +H PL+ + K +    A+ I  
Sbjct: 288 GIVTGEAIGQKSSQTAR---------NLGVVGTATTMPIHRPLLTMDKSDIVARARRIDT 338

Query: 190 QDLVNLI 196
                + 
Sbjct: 339 YTDSTIP 345


>gi|288941240|ref|YP_003443480.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Allochromatium vinosum DSM 180]
 gi|288896612|gb|ADC62448.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Allochromatium vinosum DSM 180]
          Length = 371

 Score = 63.0 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 57/193 (29%), Gaps = 11/193 (5%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           N     A   ++  SGG DS+      L++   VE L     + +  E  C     + + 
Sbjct: 4   NAQTPSAQRVIVGLSGGVDSAIAAHRLLEQGYAVEALFMKNWEEDDAEGYCA--AAEDLA 61

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +     +      H +            + +    + Q    PN  V     I       
Sbjct: 62  DARAVAERLGIRLHTVN---FSAEYWDRVFEYFLREYQALRTPNPDVLCNREIKFAAFLD 118

Query: 122 LAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWL 175
            A  LG   I  G      +    GY   R       +T     L  E       PL  L
Sbjct: 119 HALGLGAEAIATGHYARVVADAQGGYHLHRAVDADKDQTYFLHLLDQEQLSRALFPLADL 178

Query: 176 KKYETWKLAQDIG 188
            K E   LA+ +G
Sbjct: 179 TKGEVRALARRLG 191


>gi|147677391|ref|YP_001211606.1| tRNA-specific 2-thiouridylase MnmA [Pelotomaculum thermopropionicum
           SI]
 gi|205816885|sp|A5D3F0|MNMA_PELTS RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|146273488|dbj|BAF59237.1| predicted tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase [Pelotomaculum thermopropionicum SI]
          Length = 365

 Score = 63.0 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 60/194 (30%), Gaps = 13/194 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIVEL 63
           +    ++  SGG DSS   +  L++   V  ++    + G+  + + E   C    I + 
Sbjct: 2   EKTKVVVAMSGGVDSSVTAALLLEQGFEVIGITMQIWNPGEEAESKGERTCCSLTAIDDA 61

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      ++L    + +        +  ++ +  N     +     +        A
Sbjct: 62  RRVADKLGISHYVLNFRSIFEEKVIDYFTSEYLRGRTPNPC---IACNRYVKFEALLDRA 118

Query: 124 YRLGITNIVIGVCETDYSGYPDCRH----DTIRAIETAINLGMESHVTVHTPLMWL---K 176
             +G   I  G            R+       R  +    L   +   +   +M L    
Sbjct: 119 LSIGAEYIATGHYARLGYSGEYGRYTVRRPVDRRKDQTYVLYGMTQRQIARTMMPLGNYT 178

Query: 177 KYETWKLAQDIGGQ 190
           K +  K+A+D G  
Sbjct: 179 KGQVRKIAEDFGLP 192


>gi|325299934|ref|YP_004259851.1| Argininosuccinate synthase [Bacteroides salanitronis DSM 18170]
 gi|324319487|gb|ADY37378.1| Argininosuccinate synthase [Bacteroides salanitronis DSM 18170]
          Length = 401

 Score = 63.0 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 49/174 (28%), Gaps = 12/174 (6%)

Query: 5   IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +++    ++ FSGG D S T +  A ++   V     + G  +  +L+       K+  +
Sbjct: 1   MEEKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSAEQLKKNEENAYKLGAV 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                        + L +  +    SL   +   +  N      V    I   +  A  A
Sbjct: 61  -----------KYVTLDVTQEYYAKSLKYMIFGNVLRNGTYPISVSSERIFQALAIARYA 109

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
             +G   I  G                + A    I              +   K
Sbjct: 110 NEIGAHAIAHGSTGAGNDQVRFDMTFLVMAPGVEIITLTRDMALSRDYEINYLK 163


>gi|196007190|ref|XP_002113461.1| hypothetical protein TRIADDRAFT_26341 [Trichoplax adhaerens]
 gi|190583865|gb|EDV23935.1| hypothetical protein TRIADDRAFT_26341 [Trichoplax adhaerens]
          Length = 667

 Score = 63.0 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 55/198 (27%), Gaps = 10/198 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIV--- 61
           +   AL+L SGG DS+ C +        DRV  L  D G   K E +      +KI    
Sbjct: 212 RDKKALVLVSGGVDSAVCAALLHKALGSDRVIALHIDNGFMRKNESDDVKISLRKIGLDI 271

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           E++             P+ + G  +       V +   +            +        
Sbjct: 272 EILHSAYHFYTSHTSYPIMLEGIPTRHITDPLVNVYSPEEKRHIIGDTFVRVANEYLKNL 331

Query: 122 LAYRLG---ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT--VHTPLMWLK 176
                        +        S         I+      +L  +  +   +  PL    
Sbjct: 332 GIEPQDIVLAQGTLRPDLIESASKEASSEAHVIKTHHNDTDLVRQLRLQNGIIEPLQDFH 391

Query: 177 KYETWKLAQDIGGQDLVN 194
           K E   L  ++G    + 
Sbjct: 392 KDEVRALGIELGLPPHLI 409


>gi|254459090|ref|ZP_05072513.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacterales bacterium GD 1]
 gi|207084361|gb|EDZ61650.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacterales bacterium GD 1]
          Length = 343

 Score = 63.0 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 52/191 (27%), Gaps = 17/191 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR---NKVELECRLCVRKKIV 61
           +KK    L+  SGG DS+            VE L      +   ++V L         + 
Sbjct: 1   MKKNKKVLVGMSGGVDSTVSALLLKKDGYDVEGLYMKLHSKPGYHEVHLSRAQKAADFVG 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
             +                 L +  +  + +       +   PN        +       
Sbjct: 61  MKLHVL-------------DLQETFNEKVFQPFIDTYAEGKTPNPCALCNRNLKFGEMVK 107

Query: 122 LAYRLGITNIVIGVC-ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            A  +G   +  G   +TD   +     DT         +       +  PL    K + 
Sbjct: 108 FADLIGADYVATGHYIKTDGKYFYQAADDTKDQSYFLFYVQKNVLPKLIFPLGSRHKNDI 167

Query: 181 WKLAQDIGGQD 191
            + A  I G +
Sbjct: 168 KEFAASIKGLE 178


>gi|169338047|ref|ZP_02621467.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum C str. Eklund]
 gi|169295231|gb|EDS77364.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum C str. Eklund]
          Length = 350

 Score = 63.0 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 55/190 (28%), Gaps = 19/190 (10%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +I  +    +  SGG DSS       ++   +  ++        V  +    V +K+   
Sbjct: 1   MINMSKKVAVGLSGGVDSSVAAYLLKEKGYDLIGITMKVSSDLDVSED-AKKVAEKLD-- 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      +++ L    +     +  + A +      PN        I        A
Sbjct: 58  --------IPYYVIDLT---EEFKKRVINSFAEEYLQGRTPNPCAVCNKYIKFGAMLEKA 106

Query: 124 YRLGITNIVIGVCETDYSGYP-----DCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G               + + D         +L  +    V  P     K 
Sbjct: 107 KELGADYIATGHYARIEEHNGRILVLNAKDDKKDQTYMFYSLTQDVLKHVLMPCGEYTKV 166

Query: 179 ETWKLAQDIG 188
           +  ++A++IG
Sbjct: 167 QIREIAKNIG 176


>gi|312172139|emb|CBX80396.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Erwinia amylovora ATCC BAA-2158]
          Length = 369

 Score = 63.0 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 49/189 (25%), Gaps = 9/189 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +       ++  SGG DSS        +  +VE L     +    E  C     + + + 
Sbjct: 1   MSNSQKKVIVGMSGGVDSSVSAWLLQQQGFQVEGLFMKNWEEEDGEEYC--TAAEDLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      H +      +   +     +A            +  + I F  F    A
Sbjct: 59  QAVCDKLGIYLHTIN--FAAEYWDNVFEHFLAEYKAGRTPNPDILCNKEIKFKAFLEYAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  +       P+  L K 
Sbjct: 117 EDLGADYIATGHYARRQDVDGKSRLLRGLDGNKDQSYFLYTLSHQQIAQSLFPVGELAKP 176

Query: 179 ETWKLAQDI 187
           E  ++A+ +
Sbjct: 177 EVRRIAEQL 185


>gi|205822308|sp|A7HV69|MNMA_PARL1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 399

 Score = 63.0 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 49/185 (26%), Gaps = 9/185 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +   ++   V  ++   Y     V  +   C  + I +      
Sbjct: 17  RVVVAMSGGVDSSVTAALLKEQGYDVVGITLQLYDHGAAVSRKGACCAGQDIQDARRVAD 76

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++  + A        P   V     +        A  LG 
Sbjct: 77  QIGIPHYVLDYED---RFRRAVMDDFADSYAAGETPIPCVRCNERVKFRDLLDTARDLGA 133

Query: 129 TNIVIGVC-----ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +  G                 R +             E    +  PL  L K E   L
Sbjct: 134 AALATGHYIASRRGAAGRELHRPRDEERDQSYFLFATTQEQLEFLRFPLGELTKPEARAL 193

Query: 184 AQDIG 188
           A  +G
Sbjct: 194 ADRMG 198


>gi|154252635|ref|YP_001413459.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Parvibaculum lavamentivorans DS-1]
 gi|154156585|gb|ABS63802.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Parvibaculum lavamentivorans DS-1]
          Length = 462

 Score = 63.0 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 49/185 (26%), Gaps = 9/185 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +   ++   V  ++   Y     V  +   C  + I +      
Sbjct: 80  RVVVAMSGGVDSSVTAALLKEQGYDVVGITLQLYDHGAAVSRKGACCAGQDIQDARRVAD 139

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++  + A        P   V     +        A  LG 
Sbjct: 140 QIGIPHYVLDYED---RFRRAVMDDFADSYAAGETPIPCVRCNERVKFRDLLDTARDLGA 196

Query: 129 TNIVIGVC-----ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +  G                 R +             E    +  PL  L K E   L
Sbjct: 197 AALATGHYIASRRGAAGRELHRPRDEERDQSYFLFATTQEQLEFLRFPLGELTKPEARAL 256

Query: 184 AQDIG 188
           A  +G
Sbjct: 257 ADRMG 261


>gi|75674801|ref|YP_317222.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Nitrobacter winogradskyi Nb-255]
 gi|123614062|sp|Q3SV21|MNMA_NITWN RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|74419671|gb|ABA03870.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Nitrobacter winogradskyi Nb-255]
          Length = 400

 Score = 63.0 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 49/186 (26%), Gaps = 10/186 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +        V  ++   Y        +   C  + I +      
Sbjct: 15  RVVVAMSGGVDSSVTAALLKSEGYDVVGITLQLYDHGAATHRKGACCAGQDIHDARNVAA 74

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++ +N A        P   +     +        A  LG 
Sbjct: 75  RLGVPHYVLD---YESRFRETVIENFADSYASGETPVPCIECNRQVKFRDLLATARELGA 131

Query: 129 TNIVIGVCETDYSGYPDCR------HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
             +  G   +        R                     E    +  PL  + K +T +
Sbjct: 132 AALATGHYVSSRRLADGSRALLCAADTDRDQSYFLFATTREQLDFLRFPLGDMTKQQTRE 191

Query: 183 LAQDIG 188
           LA+  G
Sbjct: 192 LARRFG 197


>gi|228967746|ref|ZP_04128763.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228791968|gb|EEM39553.1| thiamine biosynthesis protein thiI [Bacillus thuringiensis serovar
           sotto str. T04001]
          Length = 234

 Score = 63.0 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 20/62 (32%), Gaps = 6/62 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG DS       + R   VE + F                ++K      +  +
Sbjct: 179 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHFH------SPPFTSERAKQKSNRFSTRVNE 232

Query: 70  SL 71
            L
Sbjct: 233 IL 234


>gi|148994989|ref|ZP_01823967.1| hypothetical protein CGSSp9BS68_00402 [Streptococcus pneumoniae
          SP9-BS68]
 gi|147926926|gb|EDK77973.1| hypothetical protein CGSSp9BS68_00402 [Streptococcus pneumoniae
          SP9-BS68]
          Length = 48

 Score = 63.0 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/40 (55%), Positives = 31/40 (77%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN 46
          K  SAL++FSGGQDS+TCL W +  ++ VE ++F YGQR+
Sbjct: 2  KRQSALVVFSGGQDSTTCLFWVMQHYETVEAVTFAYGQRH 41


>gi|291320068|ref|YP_003515326.1| thiamine biosynthesis protein thiI [Mycoplasma agalactiae]
 gi|290752397|emb|CBH40368.1| Thiamine biosynthesis protein thiI [Mycoplasma agalactiae]
          Length = 378

 Score = 63.0 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 58/187 (31%), Gaps = 25/187 (13%)

Query: 14  LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
           L SGG DS       + R  +V  LSF          +       KI +L+       G+
Sbjct: 171 LMSGGIDSPVAAFNLMKRGLKVSFLSF------ISPPQTDEKTIGKIKDLVSVLSKYQGK 224

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
            H+        +++ S   N +            +      F   A+  A    I  +  
Sbjct: 225 SHLYLANYSKLMNYISFASNES----------YRINLMRRSFYRIASKFAKSKNIMVLSN 274

Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
           G      +        TI +    +         +  PL+   K ET  +A+ I   D+ 
Sbjct: 275 GENLGQVASQTIESLSTIASASDLL---------ILRPLIANDKVETINIAKQIKTYDIS 325

Query: 194 NLILEES 200
               +E+
Sbjct: 326 IEKAKET 332


>gi|331082285|ref|ZP_08331411.1| tRNA-specific 2-thiouridylase mnmA [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330400771|gb|EGG80372.1| tRNA-specific 2-thiouridylase mnmA [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 361

 Score = 63.0 bits (151), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 47/194 (24%), Gaps = 6/194 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS        +   V  ++    Q    E +        +  +    +
Sbjct: 4   KKVVVGLSGGVDSSVAAYLLKKQGYDVIGVTMQIWQEEDNEFQEENGGCCGLSAVDDARR 63

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +   D    +          +      +  +   PN  +     +        +  +G 
Sbjct: 64  VAQILDIPYYVMNFRKEFKEKVIDYFNQEYLEGRTPNPCIACNRYVKWESLLKRSLDIGA 123

Query: 129 TNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
             I  G                +             NL  E       P+    K E  +
Sbjct: 124 DYIATGHYARVEQLPNGRYAIRNSVTAKKDQTYALYNLTQEQLSRTLMPVGEYTKEEIRR 183

Query: 183 LAQDIGGQDLVNLI 196
           +AQ+ G        
Sbjct: 184 IAQEAGLPVAHKKD 197


>gi|163843840|ref|YP_001628244.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Brucella suis ATCC 23445]
 gi|189036219|sp|B0CI68|MNMA_BRUSI RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|163674563|gb|ABY38674.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Brucella suis ATCC 23445]
          Length = 398

 Score = 63.0 bits (151), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 47/185 (25%), Gaps = 9/185 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS            V  ++   Y     V      C  + I +     +
Sbjct: 16  RVVVAMSGGVDSSVVAGILKREGYDVVGVTLQLYDHSAAVHRAGSCCAGQDIEDARRVSE 75

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++    A        P   V     +        A  LG 
Sbjct: 76  SLGIPHYVLD---YEARFREAVIDPFANSYVSGETPIPCVSCNQTVKFADLLQTARDLGA 132

Query: 129 TNI---VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYETWKL 183
             +          + +     R       ++            +       L K +  ++
Sbjct: 133 DALATGHYIRSRANGAHRALYRPVDTDRDQSYFLFATTQEQIDYLRFPLGHLPKAQVREI 192

Query: 184 AQDIG 188
           A+++G
Sbjct: 193 AEELG 197


>gi|295107553|emb|CBL05096.1| thiazole biosynthesis/tRNA modification protein ThiI [Gordonibacter
           pamelaeae 7-10-1-b]
          Length = 419

 Score = 63.0 bits (151), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/192 (10%), Positives = 49/192 (25%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   + L S G DS         R      + F          +        + ++    
Sbjct: 182 SGKVVCLLSSGIDSPVATWKLARRGAVCIGVHF------SGRPQTSDASEYLVDDIARVL 235

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           + +     +  +         +LT    +           +  R +  +  A     R G
Sbjct: 236 ERTGCIARVYTVPFGDYQREIALTVPPEL--------RVIMYRRLMFKVAEALAARERAG 287

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                  + +       + R                  + V  PL+   K E  + A+ +
Sbjct: 288 ALVTGESLGQVASQTLDNIRATDDA-----------VDLPVFRPLIGTDKLEIIREAERL 336

Query: 188 GGQDLVNLILEE 199
           G  ++ +    +
Sbjct: 337 GSYEISSQDAPD 348


>gi|313673847|ref|YP_004051958.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Calditerrivibrio nitroreducens DSM 19672]
 gi|312940603|gb|ADR19795.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Calditerrivibrio nitroreducens DSM 19672]
          Length = 343

 Score = 63.0 bits (151), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 50/180 (27%), Gaps = 8/180 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS            V  ++    +  +  L+    V KK+        
Sbjct: 2   KRVVVAMSGGVDSSVTAYILKKMGYDVVGVTIKMFENQEKYLKDAEAVAKKLDIKWEMI- 60

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D   E     ++   +     LT N       N                  AT  Y   +
Sbjct: 61  DKTIEFQETVISYFINSYRKGLTPNPCAYCNRNAKFFFLYNEMLKYGADHIATGHYADIV 120

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   +   D  +      +  ++        +  PL  + K E  K+A  IG
Sbjct: 121 EVDGHKYIKKSTNTKKDQSYYLALIRDDLLD-------KLLFPLGMMDKSEVRKIASSIG 173


>gi|260588149|ref|ZP_05854062.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Blautia hansenii DSM 20583]
 gi|260541676|gb|EEX22245.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Blautia hansenii DSM 20583]
          Length = 361

 Score = 63.0 bits (151), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 47/194 (24%), Gaps = 6/194 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS        +   V  ++    Q    E +        +  +    +
Sbjct: 4   KKVVVGLSGGVDSSVAAYLLKKQGYDVIGVTMQIWQEEDNEFQEENGGCCGLSAVDDARR 63

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +   D    +          +      +  +   PN  +     +        +  +G 
Sbjct: 64  VAQILDIPYYVMNFRKEFKEKVIDYFNQEYLEGRTPNPCIACNRYVKWESLLKRSLDIGA 123

Query: 129 TNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
             I  G                +             NL  E       P+    K E  +
Sbjct: 124 DYIATGHYARVEQLPNGRYAIRNSVTAKKDQTYALYNLTQEQLSRTLMPVGEYTKEEIRR 183

Query: 183 LAQDIGGQDLVNLI 196
           +AQ+ G        
Sbjct: 184 IAQEAGLPVAHKKD 197


>gi|224026530|ref|ZP_03644896.1| hypothetical protein BACCOPRO_03287 [Bacteroides coprophilus DSM
           18228]
 gi|224019766|gb|EEF77764.1| hypothetical protein BACCOPRO_03287 [Bacteroides coprophilus DSM
           18228]
          Length = 402

 Score = 63.0 bits (151), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 49/174 (28%), Gaps = 12/174 (6%)

Query: 5   IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +++    ++ FSGG D S T +  A ++   V     + G  +  +L+       K+  +
Sbjct: 1   MEEKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSPEQLKQNEENAYKLGAV 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                        + L +  +    SL   +   +  N      V    I   +  A  A
Sbjct: 61  -----------KYVTLDVTQEYYAKSLKYMIFGNVLRNGTYPISVSSERIFQALAIARYA 109

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
             +G   I  G                + A    I              +   K
Sbjct: 110 NEIGAHAIAHGSTGAGNDQVRFDMTFLVMAPGVEIITLTRDMALSRDYEINYLK 163


>gi|85713551|ref|ZP_01044541.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Nitrobacter sp. Nb-311A]
 gi|85699455|gb|EAQ37322.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Nitrobacter sp. Nb-311A]
          Length = 433

 Score = 62.6 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 50/188 (26%), Gaps = 10/188 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +        V  ++   Y        +   C  + I +     +
Sbjct: 48  RVVVAMSGGVDSSVTAALLKSEGYDVVGITLQLYDHGAATHRKGACCAGQDIHDARNVAE 107

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++ +N A        P   +    ++        A  LG 
Sbjct: 108 RLGVPHYVLD---YESRFRETVIENFADSYASGETPVPCIECNRLVKFRDLLATARELGA 164

Query: 129 TNIVIGVCETDYSGYPDCR------HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
             +  G            R                     E    +  PL  + K +T +
Sbjct: 165 AALATGHYVASRRSPGGSRTLLCAADADRDQSYFLFATTREQLDFLRFPLGDMTKAQTRE 224

Query: 183 LAQDIGGQ 190
           LA+  G  
Sbjct: 225 LARRFGLP 232


>gi|319403803|emb|CBI77387.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bartonella rochalimae ATCC BAA-1498]
          Length = 409

 Score = 62.6 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 47/188 (25%), Gaps = 9/188 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
           K    ++  SGG DSS            V  ++   Y            C  + I +   
Sbjct: 13  KNSRIVVAMSGGVDSSVVAGLLKKEGYDVVGITLQLYDHGAATHRVGACCAGQDIEDARR 72

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +      +IL      +    ++    A        P   V     +      T AY 
Sbjct: 73  VAETLGVPHYILD---YEERFREAVINPFAESYAHGETPIPCVSCNQTVKFSDLLTTAYE 129

Query: 126 LGITNI---VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYET 180
           LG   +            +     R       ++            +       L K   
Sbjct: 130 LGADALATGHYIRSRAHGAHRALFRSLDADRDQSYFLFATTQEQIDYLRFPLGDLSKERV 189

Query: 181 WKLAQDIG 188
            ++A ++G
Sbjct: 190 REIATEMG 197


>gi|161619531|ref|YP_001593418.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Brucella canis ATCC 23365]
 gi|260565920|ref|ZP_05836390.1| tRNA-specific 2-thiouridylase mnmA [Brucella suis bv. 4 str. 40]
 gi|189036218|sp|A9M700|MNMA_BRUC2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|161336342|gb|ABX62647.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Brucella canis ATCC 23365]
 gi|260155438|gb|EEW90518.1| tRNA-specific 2-thiouridylase mnmA [Brucella suis bv. 4 str. 40]
          Length = 398

 Score = 62.6 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 47/185 (25%), Gaps = 9/185 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS            V  ++   Y     V      C  + I +     +
Sbjct: 16  RVVVAMSGGVDSSVVAGILKREGYDVVGVTLQLYDHGAAVHRAGSCCAGQDIEDARRVSE 75

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++    A        P   V     +        A  LG 
Sbjct: 76  SLGIPHYVLD---YEARFREAVIDPFANSYVSGETPIPCVSCNQTVKFADLLQTARDLGA 132

Query: 129 TNI---VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYETWKL 183
             +          + +     R       ++            +       L K +  ++
Sbjct: 133 DALATGHYIRSRANGAHRALYRPVDTDRDQSYFLFATTQEQIDYLRFPLGHLPKAQVREI 192

Query: 184 AQDIG 188
           A+++G
Sbjct: 193 AEELG 197


>gi|23502454|ref|NP_698581.1| tRNA-specific 2-thiouridylase MnmA [Brucella suis 1330]
 gi|62290471|ref|YP_222264.1| tRNA-specific 2-thiouridylase MnmA [Brucella abortus bv. 1 str.
           9-941]
 gi|82700395|ref|YP_414969.1| tRNA-specific 2-thiouridylase MnmA [Brucella melitensis biovar
           Abortus 2308]
 gi|148559837|ref|YP_001259458.1| tRNA-specific 2-thiouridylase MnmA [Brucella ovis ATCC 25840]
 gi|189024699|ref|YP_001935467.1| tRNA-specific 2-thiouridylase MnmA [Brucella abortus S19]
 gi|225628026|ref|ZP_03786062.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Brucella ceti str. Cudo]
 gi|225853065|ref|YP_002733298.1| tRNA-specific 2-thiouridylase MnmA [Brucella melitensis ATCC 23457]
 gi|237815980|ref|ZP_04594977.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Brucella abortus str. 2308 A]
 gi|254689772|ref|ZP_05153026.1| tRNA-specific 2-thiouridylase MnmA [Brucella abortus bv. 6 str.
           870]
 gi|254694261|ref|ZP_05156089.1| tRNA-specific 2-thiouridylase MnmA [Brucella abortus bv. 3 str.
           Tulya]
 gi|254697916|ref|ZP_05159744.1| tRNA-specific 2-thiouridylase MnmA [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254702309|ref|ZP_05164137.1| tRNA-specific 2-thiouridylase MnmA [Brucella suis bv. 5 str. 513]
 gi|254704837|ref|ZP_05166665.1| tRNA-specific 2-thiouridylase MnmA [Brucella suis bv. 3 str. 686]
 gi|254708251|ref|ZP_05170079.1| tRNA-specific 2-thiouridylase MnmA [Brucella pinnipedialis
           M163/99/10]
 gi|254710623|ref|ZP_05172434.1| tRNA-specific 2-thiouridylase MnmA [Brucella pinnipedialis B2/94]
 gi|254714807|ref|ZP_05176618.1| tRNA-specific 2-thiouridylase MnmA [Brucella ceti M644/93/1]
 gi|254717867|ref|ZP_05179678.1| tRNA-specific 2-thiouridylase MnmA [Brucella ceti M13/05/1]
 gi|254730806|ref|ZP_05189384.1| tRNA-specific 2-thiouridylase MnmA [Brucella abortus bv. 4 str.
           292]
 gi|256032116|ref|ZP_05445730.1| tRNA-specific 2-thiouridylase MnmA [Brucella pinnipedialis
           M292/94/1]
 gi|256061638|ref|ZP_05451777.1| tRNA-specific 2-thiouridylase MnmA [Brucella neotomae 5K33]
 gi|256114160|ref|ZP_05454914.1| tRNA-specific 2-thiouridylase MnmA [Brucella melitensis bv. 3 str.
           Ether]
 gi|256160312|ref|ZP_05458006.1| tRNA-specific 2-thiouridylase MnmA [Brucella ceti M490/95/1]
 gi|256255517|ref|ZP_05461053.1| tRNA-specific 2-thiouridylase MnmA [Brucella ceti B1/94]
 gi|256258024|ref|ZP_05463560.1| tRNA-specific 2-thiouridylase MnmA [Brucella abortus bv. 9 str.
           C68]
 gi|256263452|ref|ZP_05465984.1| tRNA-specific 2-thiouridylase mnmA [Brucella melitensis bv. 2 str.
           63/9]
 gi|256370004|ref|YP_003107515.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Brucella microti CCM 4915]
 gi|260169251|ref|ZP_05756062.1| tRNA-specific 2-thiouridylase MnmA [Brucella sp. F5/99]
 gi|260547004|ref|ZP_05822743.1| tRNA-specific 2-thiouridylase mnmA [Brucella abortus NCTC 8038]
 gi|260755305|ref|ZP_05867653.1| tRNA-specific 2-thiouridylase mnmA [Brucella abortus bv. 6 str.
           870]
 gi|260758526|ref|ZP_05870874.1| tRNA-specific 2-thiouridylase mnmA [Brucella abortus bv. 4 str.
           292]
 gi|260762350|ref|ZP_05874693.1| tRNA-specific 2-thiouridylase mnmA [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260884320|ref|ZP_05895934.1| tRNA-specific 2-thiouridylase mnmA [Brucella abortus bv. 9 str.
           C68]
 gi|261214569|ref|ZP_05928850.1| tRNA-specific 2-thiouridylase mnmA [Brucella abortus bv. 3 str.
           Tulya]
 gi|261219714|ref|ZP_05933995.1| tRNA-specific 2-thiouridylase mnmA [Brucella ceti M13/05/1]
 gi|261222726|ref|ZP_05937007.1| tRNA-specific 2-thiouridylase mnmA [Brucella ceti B1/94]
 gi|261315753|ref|ZP_05954950.1| tRNA-specific 2-thiouridylase mnmA [Brucella pinnipedialis
           M163/99/10]
 gi|261318196|ref|ZP_05957393.1| tRNA-specific 2-thiouridylase mnmA [Brucella pinnipedialis B2/94]
 gi|261322603|ref|ZP_05961800.1| tRNA-specific 2-thiouridylase mnmA [Brucella ceti M644/93/1]
 gi|261325648|ref|ZP_05964845.1| tRNA-specific 2-thiouridylase mnmA [Brucella neotomae 5K33]
 gi|261752876|ref|ZP_05996585.1| tRNA-specific 2-thiouridylase mnmA [Brucella suis bv. 5 str. 513]
 gi|261755533|ref|ZP_05999242.1| tRNA-specific 2-thiouridylase mnmA [Brucella suis bv. 3 str. 686]
 gi|261758765|ref|ZP_06002474.1| tRNA-specific 2-thiouridylase mnmA [Brucella sp. F5/99]
 gi|265989227|ref|ZP_06101784.1| tRNA-specific 2-thiouridylase mnmA [Brucella pinnipedialis
           M292/94/1]
 gi|265995479|ref|ZP_06108036.1| tRNA-specific 2-thiouridylase mnmA [Brucella melitensis bv. 3 str.
           Ether]
 gi|265998689|ref|ZP_06111246.1| tRNA-specific 2-thiouridylase mnmA [Brucella ceti M490/95/1]
 gi|294852904|ref|ZP_06793577.1| tRNA methyl transferase [Brucella sp. NVSL 07-0026]
 gi|297248856|ref|ZP_06932574.1| tRNA methyl transferase [Brucella abortus bv. 5 str. B3196]
 gi|306843064|ref|ZP_07475687.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
           [Brucella sp. BO2]
 gi|38258585|sp|Q8CY38|MNMA_BRUSU RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|71658011|sp|Q57BT1|MNMA_BRUAB RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|123547133|sp|Q2YQB2|MNMA_BRUA2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|166234846|sp|A5VRW1|MNMA_BRUO2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|229486334|sp|B2S746|MNMA_BRUA1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|254811446|sp|C0REM2|MNMA_BRUMB RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|23348445|gb|AAN30496.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Brucella suis 1330]
 gi|62196603|gb|AAX74903.1| TrmU, tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Brucella abortus bv. 1 str. 9-941]
 gi|82616496|emb|CAJ11563.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Brucella melitensis biovar Abortus 2308]
 gi|148371094|gb|ABQ61073.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Brucella ovis ATCC 25840]
 gi|189020271|gb|ACD72993.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Brucella abortus S19]
 gi|225617189|gb|EEH14235.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Brucella ceti str. Cudo]
 gi|225641430|gb|ACO01344.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Brucella melitensis ATCC 23457]
 gi|237789278|gb|EEP63489.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Brucella abortus str. 2308 A]
 gi|256000167|gb|ACU48566.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Brucella microti CCM 4915]
 gi|260096054|gb|EEW79931.1| tRNA-specific 2-thiouridylase mnmA [Brucella abortus NCTC 8038]
 gi|260668844|gb|EEX55784.1| tRNA-specific 2-thiouridylase mnmA [Brucella abortus bv. 4 str.
           292]
 gi|260672782|gb|EEX59603.1| tRNA-specific 2-thiouridylase mnmA [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260675413|gb|EEX62234.1| tRNA-specific 2-thiouridylase mnmA [Brucella abortus bv. 6 str.
           870]
 gi|260873848|gb|EEX80917.1| tRNA-specific 2-thiouridylase mnmA [Brucella abortus bv. 9 str.
           C68]
 gi|260916176|gb|EEX83037.1| tRNA-specific 2-thiouridylase mnmA [Brucella abortus bv. 3 str.
           Tulya]
 gi|260921310|gb|EEX87963.1| tRNA-specific 2-thiouridylase mnmA [Brucella ceti B1/94]
 gi|260924803|gb|EEX91371.1| tRNA-specific 2-thiouridylase mnmA [Brucella ceti M13/05/1]
 gi|261295293|gb|EEX98789.1| tRNA-specific 2-thiouridylase mnmA [Brucella ceti M644/93/1]
 gi|261297419|gb|EEY00916.1| tRNA-specific 2-thiouridylase mnmA [Brucella pinnipedialis B2/94]
 gi|261301628|gb|EEY05125.1| tRNA-specific 2-thiouridylase mnmA [Brucella neotomae 5K33]
 gi|261304779|gb|EEY08276.1| tRNA-specific 2-thiouridylase mnmA [Brucella pinnipedialis
           M163/99/10]
 gi|261738749|gb|EEY26745.1| tRNA-specific 2-thiouridylase mnmA [Brucella sp. F5/99]
 gi|261742629|gb|EEY30555.1| tRNA-specific 2-thiouridylase mnmA [Brucella suis bv. 5 str. 513]
 gi|261745286|gb|EEY33212.1| tRNA-specific 2-thiouridylase mnmA [Brucella suis bv. 3 str. 686]
 gi|262553313|gb|EEZ09147.1| tRNA-specific 2-thiouridylase mnmA [Brucella ceti M490/95/1]
 gi|262766592|gb|EEZ12381.1| tRNA-specific 2-thiouridylase mnmA [Brucella melitensis bv. 3 str.
           Ether]
 gi|263093459|gb|EEZ17509.1| tRNA-specific 2-thiouridylase mnmA [Brucella melitensis bv. 2 str.
           63/9]
 gi|264661424|gb|EEZ31685.1| tRNA-specific 2-thiouridylase mnmA [Brucella pinnipedialis
           M292/94/1]
 gi|294821493|gb|EFG38492.1| tRNA methyl transferase [Brucella sp. NVSL 07-0026]
 gi|297176025|gb|EFH35372.1| tRNA methyl transferase [Brucella abortus bv. 5 str. B3196]
 gi|306286743|gb|EFM58293.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
           [Brucella sp. BO2]
 gi|326409608|gb|ADZ66673.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Brucella melitensis M28]
 gi|326539311|gb|ADZ87526.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Brucella melitensis M5-90]
          Length = 398

 Score = 62.6 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 47/185 (25%), Gaps = 9/185 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS            V  ++   Y     V      C  + I +     +
Sbjct: 16  RVVVAMSGGVDSSVVAGILKREGYDVVGVTLQLYDHGAAVHRAGSCCAGQDIEDARRVSE 75

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++    A        P   V     +        A  LG 
Sbjct: 76  SLGIPHYVLD---YEARFREAVIDPFANSYVSGETPIPCVSCNQTVKFADLLQTARDLGA 132

Query: 129 TNI---VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYETWKL 183
             +          + +     R       ++            +       L K +  ++
Sbjct: 133 DALATGHYIRSRANGAHRALYRPVDTDRDQSYFLFATTQEQIDYLRFPLGHLPKAQVREI 192

Query: 184 AQDIG 188
           A+++G
Sbjct: 193 AEELG 197


>gi|329956211|ref|ZP_08296891.1| putative argininosuccinate synthase [Bacteroides clarus YIT 12056]
 gi|328524685|gb|EGF51746.1| putative argininosuccinate synthase [Bacteroides clarus YIT 12056]
          Length = 404

 Score = 62.6 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 54/194 (27%), Gaps = 13/194 (6%)

Query: 4   IIKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +  K    ++ FSGG D S T +  A ++   V     + G  +  +L+       K+  
Sbjct: 1   MEAKKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSPEQLKTNEENAYKLGA 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +             + L +  +    SL   V   +  N      V    I   +  A  
Sbjct: 61  V-----------KYITLDVTQEYYEKSLKYMVFGNVLRNGTYPISVSSERIFQALAIARY 109

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM-WLKKYETW 181
           A  +G   I  G                + A    I              + +L K+   
Sbjct: 110 ANEIGADAIAHGSTGAGNDQIRFDMTFLVMAPGVEIITLTRDMALSRQEEIDYLNKHGFA 169

Query: 182 KLAQDIGGQDLVNL 195
                +     V L
Sbjct: 170 ADFAKLKYSYNVGL 183


>gi|313678598|ref|YP_004056338.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycoplasma bovis PG45]
 gi|312950108|gb|ADR24703.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycoplasma bovis PG45]
          Length = 374

 Score = 62.6 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 57/196 (29%), Gaps = 16/196 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-----QRNKVELECRLCVR-- 57
           +      +L  SGG DSS C    L +   VE L                      +   
Sbjct: 1   MSNKKKVILGMSGGVDSSVCAYLLLKQGYEVEGLFMRNWDSMLNNDFLGNENISQDICPQ 60

Query: 58  -KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
            +   + +        + H +    + +  +      ++            +  + I F 
Sbjct: 61  EQDYHDALEVANKLGIKLHRVD--FVNEYWNDVFKTFISEYEAGRTPNPDILCNKYIKFK 118

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL- 175
            F+      LG   I +G       G      D  +  +    L   SH  +   LM L 
Sbjct: 119 AFSDYAFNNLGADYIAMGHYAKVTDGRLYRAKDQNK--DQTYFLAQLSHEQLKRVLMPLA 176

Query: 176 ---KKYETWKLAQDIG 188
               K E  K+AQ+ G
Sbjct: 177 EFNSKEEVRKIAQEQG 192


>gi|306844591|ref|ZP_07477178.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
           [Brucella sp. BO1]
 gi|306275035|gb|EFM56798.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
           [Brucella sp. BO1]
          Length = 398

 Score = 62.6 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 47/185 (25%), Gaps = 9/185 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS            V  ++   Y     V      C  + I +     +
Sbjct: 16  RVVVAMSGGVDSSVVAGILKREGYDVVGVTLQLYDHGAAVHRAGSCCAGQDIEDARRVSE 75

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++    A        P   V     +        A  LG 
Sbjct: 76  SLGIPHYVLD---YEARFREAVIDPFANSYVSGETPIPCVSCNQTVKFADLLQTARDLGA 132

Query: 129 TNI---VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYETWKL 183
             +          + +     R       ++            +       L K +  ++
Sbjct: 133 DALATGHYIRSRANGAHRALYRPVDTDRDQSYFLFATTQEQIDYLRFPLGHLPKAQVREI 192

Query: 184 AQDIG 188
           A+++G
Sbjct: 193 AEELG 197


>gi|256372326|ref|YP_003110150.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Acidimicrobium ferrooxidans DSM 10331]
 gi|256008910|gb|ACU54477.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Acidimicrobium ferrooxidans DSM 10331]
          Length = 341

 Score = 62.6 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 58/187 (31%), Gaps = 10/187 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS     A +    V  ++    +       C +   +           
Sbjct: 3   RVVVAMSGGVDSSVAALMAREAGHDVIGVTLRLTEAAGDRGCCSVGDVED----ARTVAA 58

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG +HI+  A +    H ++ +      +    PN  +     + +   A  A RLG +
Sbjct: 59  LLGINHIV--ADMRAEFHRAVVEPYLDAHRRGWTPNPCMSCNRYVKVTALAAWAQRLGAS 116

Query: 130 NIVIGVCETDYSGYPDC----RHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            +V G   T   G        R           ++  E    +  PL  L K E    A 
Sbjct: 117 RLVTGHYATVLDGSRPMLVRGRDRRKDQSYVLADVPPEVLARLWLPLGELSKDEVRTRAH 176

Query: 186 DIGGQDL 192
             G    
Sbjct: 177 AAGLPVW 183


>gi|189463254|ref|ZP_03012039.1| hypothetical protein BACCOP_03971 [Bacteroides coprocola DSM 17136]
 gi|189429984|gb|EDU98968.1| hypothetical protein BACCOP_03971 [Bacteroides coprocola DSM 17136]
          Length = 402

 Score = 62.6 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 49/174 (28%), Gaps = 12/174 (6%)

Query: 5   IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +++    ++ FSGG D S T +  A ++   V     + G  +  +L+       K+  +
Sbjct: 1   MEEKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSPEQLKQNEENAYKLGAV 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                        + L +  +    SL   +   +  N      V    I   +  A  A
Sbjct: 61  -----------KYVTLDVTQEYYAKSLKYMIFGNVLRNGTYPISVSSERIFQALAIARYA 109

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
             +G   I  G                + A    I              +   K
Sbjct: 110 NEIGAHAIAHGSTGAGNDQVRFDMTFLVMAPGVEIITLTRDMALSRDYEINYLK 163


>gi|258515487|ref|YP_003191709.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Desulfotomaculum acetoxidans DSM 771]
 gi|257779192|gb|ACV63086.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Desulfotomaculum acetoxidans DSM 771]
          Length = 362

 Score = 62.6 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/191 (12%), Positives = 50/191 (26%), Gaps = 8/191 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K    ++  SGG DSS   +  L+    +  ++       + +                +
Sbjct: 2   KGKKVVVAMSGGVDSSVTAALLLEEGYEITGVTMQIWDPEQKDATGEEGCCSLSAVDDAR 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              ++       L        S +   +A  ++           R  +        A  +
Sbjct: 62  RVANILNIPYYVLNFRKQFEKSVIDYFLAEYLEGRTPNPCIACNR-YVKFTALLQKAISI 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRA----IETAINLGMESHVTVHTPLMWL---KKYE 179
           G   I  G            R+   ++     +    L   +   +   LM L    K +
Sbjct: 121 GADFIATGHYARLGYSKEYNRYIIKKSADIKKDQTYVLYNLTQNQIAHTLMPLGVYTKEQ 180

Query: 180 TWKLAQDIGGQ 190
             ++A      
Sbjct: 181 VREMALKYCLP 191


>gi|240850925|ref|YP_002972325.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bartonella grahamii as4aup]
 gi|240268048|gb|ACS51636.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bartonella grahamii as4aup]
          Length = 409

 Score = 62.6 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/185 (11%), Positives = 44/185 (23%), Gaps = 9/185 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS            V  ++   Y            C  + I +     +
Sbjct: 16  RIVVAMSGGVDSSVVAGLLKKEGYNVIGITLQLYDHGAATHRVGACCAGQDIEDARRVAE 75

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++    A        P   +     +        A  LG 
Sbjct: 76  TLGIPHYVLD---YEKRFREAVIDPFAESYAHGETPVPCIACNQTVKFADLLATARELGA 132

Query: 129 TNI---VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYETWKL 183
             +         +  +     R       ++            +       L K    ++
Sbjct: 133 DALATGHYIRSRSHGAHRALFRPLDNDRDQSYFLFATTQEQIDYLRFPLGDLPKARVREM 192

Query: 184 AQDIG 188
           A ++G
Sbjct: 193 AAEMG 197


>gi|227484962|ref|ZP_03915278.1| thiamine biosynthesis protein [Anaerococcus lactolyticus ATCC
           51172]
 gi|227237117|gb|EEI87132.1| thiamine biosynthesis protein [Anaerococcus lactolyticus ATCC
           51172]
          Length = 405

 Score = 62.6 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 52/181 (28%), Gaps = 25/181 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS         R  +++ L F                 +K ++L        G+  +  
Sbjct: 205 IDSPVAGFMVAKRGMKIDCLHFH------SYPFTSKRALQKAIDLAEIMSAYTGKMRV-- 256

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
                   +S    N+   I  N              +  A  ++   G   ++ G    
Sbjct: 257 --------YSVNLANIYKAINQNCERRETTILSRRFMMRIANKISEANGYQALITGESLG 308

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
             +          + IE+   +   S + +  PL+ + K +   ++  IG  D      +
Sbjct: 309 QVAS---------QTIESVAVINDSSDLPILRPLIAMDKKDIIDISLKIGSYDKSIEPYD 359

Query: 199 E 199
           +
Sbjct: 360 D 360


>gi|17986711|ref|NP_539345.1| tRNA-specific 2-thiouridylase MnmA [Brucella melitensis bv. 1 str.
           16M]
 gi|256045209|ref|ZP_05448107.1| tRNA-specific 2-thiouridylase MnmA [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|260565193|ref|ZP_05835677.1| tRNA-specific 2-thiouridylase mnmA [Brucella melitensis bv. 1 str.
           16M]
 gi|265991642|ref|ZP_06104199.1| tRNA methyltransferase [Brucella melitensis bv. 1 str. Rev.1]
 gi|24638318|sp|Q8YIL6|MNMA_BRUME RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|17982334|gb|AAL51609.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
           [Brucella melitensis bv. 1 str. 16M]
 gi|260151261|gb|EEW86355.1| tRNA-specific 2-thiouridylase mnmA [Brucella melitensis bv. 1 str.
           16M]
 gi|263002426|gb|EEZ15001.1| tRNA methyltransferase [Brucella melitensis bv. 1 str. Rev.1]
          Length = 398

 Score = 62.6 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 47/185 (25%), Gaps = 9/185 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS            V  ++   Y     V      C  + I +     +
Sbjct: 16  RVVVAMSGGVDSSVVAGILKREGYDVVGVTLQLYDHGAAVHRAGSCCAGQDIEDARRVSE 75

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++    A        P   V     +        A  LG 
Sbjct: 76  SLGIPHYVLD---YEARFREAVIDPFANSYVSGETPIPCVSCNQTVKFADLLQTARDLGA 132

Query: 129 TNI---VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYETWKL 183
             +          + +     R       ++            +       L K +  ++
Sbjct: 133 DALATGHYIRSRANGAHRALYRPVDTDRDQSYFLFATTQEQIDYLRFPLGHLPKAQVREI 192

Query: 184 AQDIG 188
           A+++G
Sbjct: 193 AEELG 197


>gi|292488015|ref|YP_003530892.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Erwinia amylovora CFBP1430]
 gi|292899233|ref|YP_003538602.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Erwinia amylovora ATCC 49946]
 gi|291199081|emb|CBJ46192.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Erwinia amylovora ATCC 49946]
 gi|291553439|emb|CBA20484.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Erwinia amylovora CFBP1430]
          Length = 369

 Score = 62.6 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 49/189 (25%), Gaps = 9/189 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +       ++  SGG DSS        +  +VE L     +    E  C     + + + 
Sbjct: 1   MSNSQKKVIVGMSGGVDSSVSAWLLQQQGFQVEGLFMKNWEEEDGEEYC--TAAEDLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      H +      +   +     +A            +  + I F  F    A
Sbjct: 59  QAVCDKLGIYLHTIN--FAAEYWDNVFEHFLAEYKAGRTPNPDILCNKEIKFKAFLEYAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  +       P+  L K 
Sbjct: 117 EDLGADYIATGHYVRRQDVDGKSRLLRGLDGNKDQSYFLYTLSHQQIAQSLFPVGELAKP 176

Query: 179 ETWKLAQDI 187
           E  ++A+ +
Sbjct: 177 EVRRIAEQL 185


>gi|197284773|ref|YP_002150645.1| tRNA-specific 2-thiouridylase MnmA [Proteus mirabilis HI4320]
 gi|227357779|ref|ZP_03842128.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Proteus mirabilis ATCC 29906]
 gi|229486421|sp|B4EVG2|MNMA_PROMH RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|194682260|emb|CAR41993.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Proteus mirabilis HI4320]
 gi|227162108|gb|EEI47122.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Proteus mirabilis ATCC 29906]
          Length = 367

 Score = 62.6 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 53/192 (27%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++  +V  L     + +     C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLKEQGYQVVGLFMKNWEEDDDTEYCSASA--DL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     ++            +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIELHTIN--FAAEYWDNVFEHFLSEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G            +      +          L  +       P+  +
Sbjct: 115 YAAEDLGADYIATGHYVRRRDIDGKSQLLRGVDNNKDQSYFLYTLSHQQIAQSLFPVGEM 174

Query: 176 KKYETWKLAQDI 187
           +K E  K+A+ +
Sbjct: 175 EKPEVRKIAEKL 186


>gi|238809910|dbj|BAH69700.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 382

 Score = 62.6 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 52/193 (26%), Gaps = 12/193 (6%)

Query: 5   IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-----KVELECRLCVR- 57
           I      ++L  SGG DSS      L +   VE L                      +  
Sbjct: 9   INMHKKKVILGMSGGVDSSVAAYLLLQQGYDVEGLFMRNWDSYVNNDFLGNENISQDICP 68

Query: 58  --KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
             +   + +        + H +    + +   +     +    +        +  + I F
Sbjct: 69  QEQDYQDALAVANKLGIKLHRVD--FVKEYWDNVFENFIEEYKKGRTPNPDILCNKYIKF 126

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGY-PDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
             F      +L    I +G      +G     +            L  +    V  PL  
Sbjct: 127 DAFLKYAFEKLNADYIAMGHYAKVKNGKLYRAKDQNKDQTYFLAQLTNQQLEKVLMPLAD 186

Query: 175 LKKYETWKLAQDI 187
             K E  K+A+ +
Sbjct: 187 YPKEEIRKIAKKL 199


>gi|217978097|ref|YP_002362244.1| tRNA-specific 2-thiouridylase MnmA [Methylocella silvestris BL2]
 gi|217503473|gb|ACK50882.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylocella silvestris BL2]
          Length = 415

 Score = 62.6 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 49/186 (26%), Gaps = 10/186 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +   ++   V  ++   Y     +  +   C  + I +      
Sbjct: 31  RVVVAMSGGVDSSVVAALMKEQGYDVIAVTMQLYDHGEAIHRKGACCAGQDIQDARLVAA 90

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L      +     +    +        P   V   + I        A  LG 
Sbjct: 91  RLDIPHYVLD---YEERFREKVINPFSHSYATGETPIPCVSCNSEIKFADLFDTALDLGA 147

Query: 129 TNIVIGVCETDYSGYPDCRHDT------IRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
             +  G   +  S     R                          +  PL  + K +   
Sbjct: 148 DVLATGHYVSTRSDEAGERVLHRAFDGARDQSYFLFATTRRQLQMLRFPLGDMTKTDVRA 207

Query: 183 LAQDIG 188
           LA+  G
Sbjct: 208 LARRFG 213


>gi|18976401|ref|NP_577758.1| hypothetical protein PF0029 [Pyrococcus furiosus DSM 3638]
 gi|18891929|gb|AAL80153.1| hypothetical protein PF0029 [Pyrococcus furiosus DSM 3638]
          Length = 477

 Score = 62.6 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/226 (10%), Positives = 54/226 (23%), Gaps = 6/226 (2%)

Query: 1   MNDIIKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           M DI          ++ SGG++S        +    V    F+    +           K
Sbjct: 132 MEDIELNPDYNKCAVMLSGGKESLLTYGILKEIGCNVYPFFFNESGGHWKVALTAYKWFK 191

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
           +      K   ++   +      +  +   ++ K  A                 +  +  
Sbjct: 192 ENESNTKKVWSNVDRLYTFIERNMKILQ--NVGKPRAEIYPIRLFFFEHYVFSFLPLIEK 249

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
                  LG           ++ G P       ++      +             W    
Sbjct: 250 YNIGNVLLGNEYDDPRGLTYEFHGIPHFYAVLDQSQFFDKYMTRWFAERGLNIRQWSAVR 309

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPAC 224
               L  +    +    + +   +C+     K  +    C +C  C
Sbjct: 310 PITGLIVERILYNRYPELFKLQRSCHS--VHKEGDDYVPCGTCFKC 353


>gi|254719618|ref|ZP_05181429.1| tRNA-specific 2-thiouridylase MnmA [Brucella sp. 83/13]
 gi|265984628|ref|ZP_06097363.1| tRNA-specific 2-thiouridylase mnmA [Brucella sp. 83/13]
 gi|306837544|ref|ZP_07470417.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Brucella sp. NF 2653]
 gi|264663220|gb|EEZ33481.1| tRNA-specific 2-thiouridylase mnmA [Brucella sp. 83/13]
 gi|306407370|gb|EFM63576.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Brucella sp. NF 2653]
          Length = 398

 Score = 62.6 bits (150), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 47/185 (25%), Gaps = 9/185 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS            V  ++   Y     V      C  + I +     +
Sbjct: 16  RVVVAMSGGVDSSVVAGILKREGYDVVGVTLQLYDHGAAVHRAGSCCAGQDIEDARRVSE 75

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++    A        P   V     +        A  LG 
Sbjct: 76  SLGIPHYVLD---YEARFREAVIDPFANSYVSGETPIPCVSCNQTVKFADLLQAARDLGA 132

Query: 129 TNI---VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYETWKL 183
             +          + +     R       ++            +       L K +  ++
Sbjct: 133 DALATGHYIRSRANGAHRALYRPVDTDRDQSYFLFATTQEQIDYLRFPLGHLPKAQVREI 192

Query: 184 AQDIG 188
           A+++G
Sbjct: 193 AEELG 197


>gi|115375767|ref|ZP_01463020.1| ExsB superfamily [Stigmatella aurantiaca DW4/3-1]
 gi|310824072|ref|YP_003956430.1| exoenzyme s synthesis protein b/queuosine synthesis family protein
           [Stigmatella aurantiaca DW4/3-1]
 gi|115367241|gb|EAU66223.1| ExsB superfamily [Stigmatella aurantiaca DW4/3-1]
 gi|309397144|gb|ADO74603.1| Exoenzyme S synthesis protein B/queuosine synthesis family protein
           [Stigmatella aurantiaca DW4/3-1]
          Length = 198

 Score = 62.6 bits (150), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 75/215 (34%), Gaps = 33/215 (15%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              LL SGG DS     W          L+ DYGQR+ +            +       +
Sbjct: 2   KTALLLSGGMDSIAIAWWRRPE----LALTVDYGQRSALAE----------LRAAASAAE 47

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++G +H+   A L  +    +     + +        + P RN + +  AA  A   G+ 
Sbjct: 48  AMGIEHLTVEADLSALGSGDMAGAEPLSLA---PVTEWWPFRNQMLVTLAAMKAVAHGVQ 104

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++IG  +TD           +     A+    E  + +  P + L   E  +       
Sbjct: 105 RLLIGTLKTDGLHADGRPDFVMA--LDALLRLQEGGLRLEAPAIALTSAELIR------T 156

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPAC 224
            ++   +L  +H+C++G         + C  C  C
Sbjct: 157 SNIPMEVLAWAHSCHVGI--------HACGQCRGC 183


>gi|325479587|gb|EGC82683.1| thiamine biosynthesis/tRNA modification protein ThiI [Anaerococcus
           prevotii ACS-065-V-Col13]
          Length = 387

 Score = 62.6 bits (150), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 17/181 (9%), Positives = 47/181 (25%), Gaps = 25/181 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS         R   +  + F                 +K ++L        G+  +  
Sbjct: 187 IDSPVAGFMMAKRGMNINAIHFH------SYPFTSKRAHQKAMDLAKILSKYTGKMTVYS 240

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
           + +            +   I  N              +  A+ ++ +     ++ G    
Sbjct: 241 INLA----------EIYKAISKNCPRRETTILSRRFMMRIASKISEKYEYQALITGESLG 290

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
             +                  +   S   +  PL+ + K +  ++++ IG  +      +
Sbjct: 291 QVASQTIESMS---------VINESSKYPILRPLIAMDKKDIIEISEKIGSYEKAIEPYD 341

Query: 199 E 199
           +
Sbjct: 342 D 342


>gi|153809012|ref|ZP_01961680.1| hypothetical protein BACCAC_03315 [Bacteroides caccae ATCC 43185]
 gi|237715258|ref|ZP_04545739.1| argininosuccinate synthase [Bacteroides sp. D1]
 gi|237719636|ref|ZP_04550117.1| argininosuccinate synthase [Bacteroides sp. 2_2_4]
 gi|260172095|ref|ZP_05758507.1| argininosuccinate synthase [Bacteroides sp. D2]
 gi|262405102|ref|ZP_06081652.1| argininosuccinate synthase [Bacteroides sp. 2_1_22]
 gi|293371667|ref|ZP_06618078.1| putative argininosuccinate synthase [Bacteroides ovatus SD CMC 3f]
 gi|294644507|ref|ZP_06722264.1| putative argininosuccinate synthase [Bacteroides ovatus SD CC 2a]
 gi|294808651|ref|ZP_06767385.1| putative argininosuccinate synthase [Bacteroides xylanisolvens SD
           CC 1b]
 gi|298482465|ref|ZP_07000651.1| argininosuccinate synthase [Bacteroides sp. D22]
 gi|299147458|ref|ZP_07040523.1| argininosuccinate synthase [Bacteroides sp. 3_1_23]
 gi|315920406|ref|ZP_07916646.1| argininosuccinate synthase [Bacteroides sp. D2]
 gi|149128345|gb|EDM19564.1| hypothetical protein BACCAC_03315 [Bacteroides caccae ATCC 43185]
 gi|229444567|gb|EEO50358.1| argininosuccinate synthase [Bacteroides sp. D1]
 gi|229450905|gb|EEO56696.1| argininosuccinate synthase [Bacteroides sp. 2_2_4]
 gi|262355977|gb|EEZ05067.1| argininosuccinate synthase [Bacteroides sp. 2_1_22]
 gi|292633364|gb|EFF51934.1| putative argininosuccinate synthase [Bacteroides ovatus SD CMC 3f]
 gi|292640148|gb|EFF58409.1| putative argininosuccinate synthase [Bacteroides ovatus SD CC 2a]
 gi|294444090|gb|EFG12823.1| putative argininosuccinate synthase [Bacteroides xylanisolvens SD
           CC 1b]
 gi|295088136|emb|CBK69659.1| argininosuccinate synthase [Bacteroides xylanisolvens XB1A]
 gi|298271444|gb|EFI13019.1| argininosuccinate synthase [Bacteroides sp. D22]
 gi|298514736|gb|EFI38620.1| argininosuccinate synthase [Bacteroides sp. 3_1_23]
 gi|313694281|gb|EFS31116.1| argininosuccinate synthase [Bacteroides sp. D2]
          Length = 402

 Score = 62.6 bits (150), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 58/196 (29%), Gaps = 6/196 (3%)

Query: 4   IIKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +K    ++ FSGG D S T +  A ++   V     + G  ++ +L+       K+  
Sbjct: 1   MEEKKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSEEQLKTNEENAYKLGA 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +     D   E +   L  +    +        + +    +       R    +   A  
Sbjct: 61  VKYVTLDVTQEYYEKSLKYM-VFGNVLRNGTYPISVSSERIFQALAIARYANEIGADAIA 119

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK----Y 178
               G  N  I    T     P+    T+             ++  H       K    Y
Sbjct: 120 HGSTGAGNDQIRFDMTFLVLAPNVEIITLTRDMALSRQEEIDYLNKHGFSADFTKLKYSY 179

Query: 179 ETWKLAQDIGGQDLVN 194
                   I G ++++
Sbjct: 180 NVGLWGTSICGGEILD 195


>gi|29349168|ref|NP_812671.1| argininosuccinate synthase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253571331|ref|ZP_04848738.1| argininosuccinate synthase [Bacteroides sp. 1_1_6]
 gi|298386866|ref|ZP_06996421.1| argininosuccinate synthase [Bacteroides sp. 1_1_14]
 gi|29341076|gb|AAO78865.1| argininosuccinate synthase [Bacteroides thetaiotaomicron VPI-5482]
 gi|251839284|gb|EES67368.1| argininosuccinate synthase [Bacteroides sp. 1_1_6]
 gi|298260540|gb|EFI03409.1| argininosuccinate synthase [Bacteroides sp. 1_1_14]
          Length = 402

 Score = 62.6 bits (150), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 58/196 (29%), Gaps = 6/196 (3%)

Query: 4   IIKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +K    ++ FSGG D S T +  A ++   V     + G  ++ +L+       K+  
Sbjct: 1   MEEKKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSEEQLKTNEENAYKLGA 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +     D   E +   L  +    +        + +    +       R    +   A  
Sbjct: 61  VKYVTLDVTQEYYEKSLKYM-VFGNVLRNGTYPISVSSERIFQALAIARYANEIGADAIA 119

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK----Y 178
               G  N  I    T     P+    T+             ++  H       K    Y
Sbjct: 120 HGSTGAGNDQIRFDMTFLVLAPNVEIITLTRDMALSRQEEIDYLNKHGFSADFTKLKYSY 179

Query: 179 ETWKLAQDIGGQDLVN 194
                   I G ++++
Sbjct: 180 NVGLWGTSICGGEILD 195


>gi|299531933|ref|ZP_07045333.1| tRNA-specific 2-thiouridylase MnmA [Comamonas testosteroni S44]
 gi|298720108|gb|EFI61065.1| tRNA-specific 2-thiouridylase MnmA [Comamonas testosteroni S44]
          Length = 376

 Score = 62.6 bits (150), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 54/194 (27%), Gaps = 12/194 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      ++  SGG DS+        +   V  +     + +     C   +     + +
Sbjct: 1   MSNKQRVVVGLSGGVDSAVTAYLLKKQGHEVVGIFMKNWEDDDDSEYCSSNI-----DFV 55

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                +      +            +      + Q    PN  V     I        A 
Sbjct: 56  DAAAVADVIGIEIEHVNFAADYKDRVFAEFLREYQAGRTPNPDVLCNAEIKFKAFLDHAM 115

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV-------HTPLMWLKK 177
           RLG   I  G              + ++ ++ + +     H            P+  L K
Sbjct: 116 RLGAEKIATGHYARVRQNPSTQLFELLKGLDNSKDQSYFLHRLNQAQLSKAMFPVGELHK 175

Query: 178 YETWKLAQDIGGQD 191
            E  ++A++IG  +
Sbjct: 176 TEVRRIAEEIGLPN 189


>gi|264680822|ref|YP_003280732.1| Predicted tRNA(5-methylaminomethyl-2-
           thiouridylate)methyltransferase [Comamonas testosteroni
           CNB-2]
 gi|262211338|gb|ACY35436.1| Predicted tRNA(5-methylaminomethyl-2-
           thiouridylate)methyltransferase [Comamonas testosteroni
           CNB-2]
          Length = 376

 Score = 62.6 bits (150), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 54/194 (27%), Gaps = 12/194 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      ++  SGG DS+        +   V  +     + +     C   +     + +
Sbjct: 1   MSNKQRVVVGLSGGVDSAVTAYLLKKQGHEVVGIFMKNWEDDDDSEYCSSNI-----DFV 55

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                +      +            +      + Q    PN  V     I        A 
Sbjct: 56  DAAAVADVIGIEIEHVNFAADYKDRVFAEFLREYQAGRTPNPDVLCNAEIKFKAFLDHAM 115

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV-------HTPLMWLKK 177
           RLG   I  G              + ++ ++ + +     H            P+  L K
Sbjct: 116 RLGAEKIATGHYARVRQNPSTQLFELLKGLDNSKDQSYFLHRLNQAQLSKAMFPVGELHK 175

Query: 178 YETWKLAQDIGGQD 191
            E  ++A++IG  +
Sbjct: 176 TEVRRIAEEIGLPN 189


>gi|260752750|ref|YP_003225643.1| tRNA-specific 2-thiouridylase MnmA [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|258552113|gb|ACV75059.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Zymomonas mobilis subsp. mobilis NCIMB 11163]
          Length = 370

 Score = 62.2 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 59/222 (26%), Gaps = 11/222 (4%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIV 61
           D  K A   ++  SGG DSS   + A         ++   Y     V  +   C  K I 
Sbjct: 8   DKPKSAQRIVVAMSGGVDSSVVAALAKATGAETIGITLQLYDHGAAVGRKGSCCAGKDIR 67

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +     +      ++            S+  +   +      P   +     +       
Sbjct: 68  DARAVAEKIGIPHYVFDYEN---NFKESVIDDFVSEYVAGRTPVPCIRCNQGVKFTDLLN 124

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDT-----IRAIETAINLGMESHVTVHTPLMWLK 176
           +A  LG   +  G                                 E    +  PL  L 
Sbjct: 125 VARELGADCLATGHYVRRLVNNDRVEMHRALDPARDQSYFLFATTKEQLDYLRFPLGGLP 184

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGC 218
           K +  ++A ++G    +    ++   C++   D        C
Sbjct: 185 KPKVREMAAELGLSVAMKADSQDI--CFVPDGDYARIVEEKC 224


>gi|241761211|ref|ZP_04759299.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|283856328|ref|YP_162504.2| tRNA-specific 2-thiouridylase MnmA [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|292495018|sp|Q5NPG7|MNMA_ZYMMO RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|241374118|gb|EER63615.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|283775325|gb|AAV89393.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 370

 Score = 62.2 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 59/222 (26%), Gaps = 11/222 (4%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIV 61
           D  K A   ++  SGG DSS   + A         ++   Y     V  +   C  K I 
Sbjct: 8   DKPKSAQRIVVAMSGGVDSSVVAALAKATGAETIGITLQLYDHGAAVGRKGSCCAGKDIR 67

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +     +      ++            S+  +   +      P   +     +       
Sbjct: 68  DARAVAEKIGIPHYVFDYEN---NFKESVIDDFVSEYVAGRTPVPCIRCNQGVKFTDLLN 124

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDT-----IRAIETAINLGMESHVTVHTPLMWLK 176
           +A  LG   +  G                                 E    +  PL  L 
Sbjct: 125 VARELGADCLATGHYVRRLVNNDRVEMHRALDPARDQSYFLFATTKEQLDYLRFPLGGLP 184

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGC 218
           K +  ++A ++G    +    ++   C++   D        C
Sbjct: 185 KPKVREMAAELGLSVAMKADSQDI--CFVPDGDYARIVEEKC 224


>gi|171057122|ref|YP_001789471.1| tRNA-specific 2-thiouridylase MnmA [Leptothrix cholodnii SP-6]
 gi|205816874|sp|B1XX60|MNMA_LEPCP RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|170774567|gb|ACB32706.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Leptothrix cholodnii SP-6]
          Length = 380

 Score = 62.2 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 48/198 (24%), Gaps = 12/198 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN  +      ++  SGG DS+        +   V  +     + +     C        
Sbjct: 1   MNTQLPPKQRIVVGLSGGVDSAVSAWLLKQQGHEVVAIFMKNWEDDDDSEFCSSRQ---- 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            + +     +      +            +      +      PN  V     I      
Sbjct: 57  -DFLDAASVADVLGIEIEHVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFL 115

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLM 173
             A RLG   I  G             H                  L      +   P+ 
Sbjct: 116 DHAMRLGADRIATGHYARVRHNPATGLHELLKGLDPLKDQSYFLHRLNQAQLASTLFPVG 175

Query: 174 WLKKYETWKLAQDIGGQD 191
            L K E  ++A +IG  +
Sbjct: 176 ELPKTEVRRIALEIGLPN 193


>gi|322833617|ref|YP_004213644.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rahnella sp. Y9602]
 gi|321168818|gb|ADW74517.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rahnella sp. Y9602]
          Length = 369

 Score = 62.2 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 53/192 (27%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +VE L     + +  E  C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYQVEGLFMKNWEEDDDEEYC--TAATDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +             +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G                              LG E       P+  L
Sbjct: 115 FAAEDLGADYIATGHYVRRQDINGVSHLLRGIDGNKDQSYFLYTLGHEQVAQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K E  ++A+++
Sbjct: 175 EKPEVRRIAEEL 186


>gi|283478712|emb|CAY74628.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Erwinia pyrifoliae DSM 12163]
          Length = 384

 Score = 62.2 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 50/191 (26%), Gaps = 9/191 (4%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
             +       ++  SGG DSS        +  +VE L        + + E      + + 
Sbjct: 14  YKMSNSQKKVIVGMSGGVDSSVSAWLLQQQGFQVEGLFMK--NWEEDDDEAYCTAAEDLA 71

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +            H +      +   +     +A            +  + I F  F   
Sbjct: 72  DAQAVCDKLGIYLHTVN--FAAEYWDNVFEHFLAEYKAGRTPNPDILCNKEIKFKAFLEF 129

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLK 176
            A  LG   I  G            R                 LG E       P+  L 
Sbjct: 130 AAEDLGADYIATGHYVRRQDMGGKSRLLRGLDGNKDQSYFLYTLGHEHIAQSLFPVGELA 189

Query: 177 KYETWKLAQDI 187
           K E  ++A+ +
Sbjct: 190 KPEVRRIAEQL 200


>gi|323137322|ref|ZP_08072400.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylocystis sp. ATCC 49242]
 gi|322397309|gb|EFX99832.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylocystis sp. ATCC 49242]
          Length = 412

 Score = 62.2 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 45/186 (24%), Gaps = 10/186 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +   ++   V  ++   Y        +   C  + I +      
Sbjct: 21  RVVVAMSGGVDSSVVAALLKEQGYDVVGVTLQLYDHGEATHRKGACCAGQDIQDARAVAA 80

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                  +L            +    A        P   V     I        A  LG 
Sbjct: 81  RLGIPHFVLD---YERRFREKVIDEFAASYASGETPVPCVACNQFIKFADLFETAKDLGA 137

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM------WLKKYETWK 182
             +  G   +        R        +          T     M         K E  +
Sbjct: 138 HVLATGHYISSRDDGEGGRALYRAKDASRDQSYFLFATTREQLRMLRFPLGDYTKAEVRE 197

Query: 183 LAQDIG 188
           +A++ G
Sbjct: 198 MARNYG 203


>gi|146280749|ref|YP_001170902.1| thiamine biosynthesis protein ThiI [Pseudomonas stutzeri A1501]
 gi|145568954|gb|ABP78060.1| thiamine biosynthesis protein ThiI [Pseudomonas stutzeri A1501]
          Length = 519

 Score = 62.2 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 55/181 (30%), Gaps = 25/181 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           L+L SGG DS+      + R        F+ G R              ++E+        
Sbjct: 218 LVLMSGGFDSTVAAYQMMRRGLMTHFCFFNLGGRAHELG---------VMEVAHYLWKKY 268

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G  H +       +  S   + V  +I      +        + L  +  +A RL I  +
Sbjct: 269 GSSHRV-------LFISVPFEEVVGEILQKVDNSQMGVVLKRMMLRASTEIAERLHIDAL 321

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V G   +  S         I +    +         V  PL+   K +    A  IG  +
Sbjct: 322 VTGEAISQVSSQTLPNLSVIDSATDML---------VLRPLIARHKQDIIDTAFQIGTAE 372

Query: 192 L 192
            
Sbjct: 373 F 373


>gi|282901416|ref|ZP_06309341.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Cylindrospermopsis raciborskii CS-505]
 gi|281193695|gb|EFA68667.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Cylindrospermopsis raciborskii CS-505]
          Length = 350

 Score = 62.2 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 56/189 (29%), Gaps = 15/189 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS   +   ++   V  L+        +      C  + +V+    
Sbjct: 1   MMKKVVVGLSGGVDSSVAAAILHNQGYDVIGLTL------WLMKGKGQCCSEGMVDAATI 54

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +       I+ +  +   +       V+               R + F         +L
Sbjct: 55  CQQLSIPHEIVDMRDVFQTNIVDYL--VSGYSAGITPLPCSQCNRTVKFGPMLEYAREKL 112

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-------VTVHTPLMWLKKYE 179
           G   I  G        +   R+  +RA +   +     +            PL  L K +
Sbjct: 113 GSDVIATGHYARIAYDHGTERYQLLRAFDRNKDQSYFLYDLSQELLAGTIFPLGELNKND 172

Query: 180 TWKLAQDIG 188
           T K+A + G
Sbjct: 173 TRKIAAEYG 181


>gi|157962359|ref|YP_001502393.1| tRNA-specific 2-thiouridylase MnmA [Shewanella pealeana ATCC
           700345]
 gi|157847359|gb|ABV87858.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shewanella pealeana ATCC 700345]
          Length = 398

 Score = 62.2 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 52/185 (28%), Gaps = 9/185 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS      + +  +VE L     + +  +  C       + +      
Sbjct: 38  KKVIVGMSGGVDSSVSAYLLMKQGYQVEGLFMKNWEEDDTDEYCA--AADDLKDAQAVCD 95

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + H +      +   +     +A            +  + I F  F       L  
Sbjct: 96  KLGIKLHTVN--FASEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFADEILDA 153

Query: 129 TNIVIGVCETDYSGYPDCRH-----DTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             I +G            +                 LG E       P+  L K E  ++
Sbjct: 154 DYIAMGHYVRRRDIDGTSQMLRGVDGNKDQSYFLYTLGYEQVARSLFPVGELDKSEVREI 213

Query: 184 AQDIG 188
           A+++G
Sbjct: 214 AKEMG 218


>gi|160903153|ref|YP_001568734.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Petrotoga mobilis SJ95]
 gi|205816886|sp|A9BIS3|MNMA_PETMO RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|160360797|gb|ABX32411.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Petrotoga mobilis SJ95]
          Length = 367

 Score = 62.2 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 53/193 (27%), Gaps = 15/193 (7%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               L+L SGG DSS       ++   V  L F         L       KK+       
Sbjct: 3   NKKVLMLMSGGVDSSVAAYLLKEQNYHVIGLHFKTVSDVVFSLIPEK---KKVCCSPSDT 59

Query: 68  KDSLGEDHILPLAIL-----GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +D+L     L L               +        ++   PN  +          A  +
Sbjct: 60  QDALKIADKLDLDDFQIVDIKKEFKEKIIDYFIKTYKEGKTPNPCMLCNRFFKFGKALEI 119

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-------TVHTPLMWL 175
           A+  G   +  G             +   + ++   +               +H PL  +
Sbjct: 120 AHSYGADWVSSGHYLIKEYSNKYSTYIIKKGVDQYKDQSYFLSYIDKNTLPKLHFPLGNM 179

Query: 176 KKYETWKLAQDIG 188
            K E   +A  IG
Sbjct: 180 YKVEIRDIANKIG 192


>gi|327479017|gb|AEA82327.1| thiamine biosynthesis protein ThiI [Pseudomonas stutzeri DSM 4166]
          Length = 484

 Score = 62.2 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 55/181 (30%), Gaps = 25/181 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           L+L SGG DS+      + R        F+ G R              ++E+        
Sbjct: 183 LVLMSGGFDSTVAAYQMMRRGLMTHFCFFNLGGRAHELG---------VMEVAHYLWKKY 233

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G  H +       +  S   + V  +I      +        + L  +  +A RL I  +
Sbjct: 234 GSSHRV-------LFISVPFEEVVGEILQKVDNSQMGVVLKRMMLRASTEIAERLHIDAL 286

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V G   +  S         I +    +         V  PL+   K +    A  IG  +
Sbjct: 287 VTGEAISQVSSQTLPNLSVIDSATDML---------VLRPLIASHKQDIIDTAFQIGTAE 337

Query: 192 L 192
            
Sbjct: 338 F 338


>gi|323485784|ref|ZP_08091119.1| hypothetical protein HMPREF9474_02870 [Clostridium symbiosum
           WAL-14163]
 gi|323693136|ref|ZP_08107354.1| hypothetical protein HMPREF9475_02217 [Clostridium symbiosum
           WAL-14673]
 gi|323400772|gb|EGA93135.1| hypothetical protein HMPREF9474_02870 [Clostridium symbiosum
           WAL-14163]
 gi|323502619|gb|EGB18463.1| hypothetical protein HMPREF9475_02217 [Clostridium symbiosum
           WAL-14673]
          Length = 359

 Score = 62.2 bits (149), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 51/190 (26%), Gaps = 10/190 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL--M 64
           +    ++  SGG DSS       ++   V  ++    Q  + E++        +  +   
Sbjct: 2   EKKKVVVGMSGGVDSSVAAWLLKEQGYDVIGVTMQIWQDEEPEIQEENGGCCGLSAVDDA 61

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            +  ++LG  + +           ++      +  +   PN  +     +        + 
Sbjct: 62  RRVAENLGIPYYVM--NFKREFKENVMDYFVQEYIEGKTPNPCIACNRFVKWESLLKRSM 119

Query: 125 RLGITNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            +G   I  G                              NL          P+    K 
Sbjct: 120 DIGADYIATGHYARIEQLENGRYTLRKSATAAKDQTYALYNLTQHQLSHTLMPVGEYTKD 179

Query: 179 ETWKLAQDIG 188
           E   +A  IG
Sbjct: 180 EIRGMADKIG 189


>gi|26554038|ref|NP_757972.1| thiamin biosynthesis protein [Mycoplasma penetrans HF-2]
 gi|38258587|sp|Q8EVH8|THII_MYCPE RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|26454046|dbj|BAC44376.1| thiamin biosynthesis protein [Mycoplasma penetrans HF-2]
          Length = 383

 Score = 62.2 bits (149), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 59/187 (31%), Gaps = 23/187 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               L L SGG DS         R  +V+ L+F      ++ L     + K+I      +
Sbjct: 170 NGRCLSLLSGGIDSPVASFLLQKRGQQVDYLTFITDDVTEITLNKLKSLIKQITLNYKIY 229

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           K       I+                  +    N      +  R+   +     + Y++ 
Sbjct: 230 KPR---FFIVDFT----------KVQHELIHMSNEKYRITLMRRSFYRIAQQLAIKYKMN 276

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +++ G      +       +TI  +           + +  PL+   K E  ++A+ I
Sbjct: 277 --SLICGDSLGQVASQTIESINTISQV--------CDKMEIFRPLLTFDKVEIIEIAKQI 326

Query: 188 GGQDLVN 194
           G  ++  
Sbjct: 327 GTYEISI 333


>gi|330988020|gb|EGH86123.1| ExsB family protein [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 201

 Score = 62.2 bits (149), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 68/223 (30%), Gaps = 33/223 (14%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           LL SGG DS     W           + +YGQ             +  +E        L 
Sbjct: 5   LLLSGGMDSLALAWWKRPD----IAFTLNYGQL----------AAQAEIEASRTICRQLN 50

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
             H +       +    +    A    D    + + P RN + +   A  A   G+T++ 
Sbjct: 51  ISHQVIEIDCRQLGSGDMAGTRAD---DLAPASDWWPYRNQMLVTLTAMKAISFGVTHLW 107

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
           +G   +D                  +    E  + V  P + L   E  +L+       +
Sbjct: 108 LGTVRSDGFHKDGSPEFMTAISH--LLSLQEGGIVVEAPAIGLSTAELVRLS------GI 159

Query: 193 VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
              +L  +H+C        ++    C +C  C    + + E  
Sbjct: 160 PADLLAWAHSC--------HKSYVACGNCRGCNKYMEVFQEVG 194


>gi|262276991|ref|ZP_06054784.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [alpha
           proteobacterium HIMB114]
 gi|262224094|gb|EEY74553.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [alpha
           proteobacterium HIMB114]
          Length = 377

 Score = 62.2 bits (149), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 54/192 (28%), Gaps = 12/192 (6%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIVE 62
           K     ++  SGG DSS   +        V  ++   FDYG+  K +  C  C  K I +
Sbjct: 20  KSQTKVVVAMSGGVDSSVVAALLKKDGYDVIGITLQLFDYGKIGKTKGTC--CAGKDIYD 77

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     +  +     +       + +  A        P   V     +        
Sbjct: 78  AKKVCDQLEIKHEVFNYESI---FKEEVIEKFADSYIKGETPIPCVDCNQTVKFRDLFKS 134

Query: 123 AYRLGITNI----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
           A  L    +     +       +                 N   E    +  PL  L K 
Sbjct: 135 AKNLDADALATGHYVKRIFNHSAMMYRPEDLNRDQSYFLFNTTQEQLDYLRFPLASLPKT 194

Query: 179 ETWKLAQDIGGQ 190
           +T  +A+D+  Q
Sbjct: 195 KTRDIARDLKLQ 206


>gi|205822346|sp|B1ZGZ6|MNMA_METPB RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 385

 Score = 62.2 bits (149), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 53/199 (26%), Gaps = 14/199 (7%)

Query: 1   MN--DIIKKA--PSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLC 55
           MN  D+ K       ++  SGG DSS            V  ++   Y        +   C
Sbjct: 1   MNSLDLPKPPHETRVVVAMSGGVDSSVVAGLLKREGYDVVGVTLQLYDHGAATHRKGACC 60

Query: 56  VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
             + I +     +      ++L           S+    A        P   V     + 
Sbjct: 61  AGRDIHDARAVAETLGIPHYVLDYED---RFRESVIDRFAESYLSGETPIPCVECNRSVK 117

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDT------IRAIETAINLGMESHVTVH 169
                 +A  LG   +  G      +     R                     E    + 
Sbjct: 118 FRDLLGMARDLGAEALATGHYVASRAQPEGGRALYRALDPARDQSYFLYATTPEQLAFLR 177

Query: 170 TPLMWLKKYETWKLAQDIG 188
            PL    K ET  LA+++G
Sbjct: 178 FPLGERPKDETRALARELG 196


>gi|188583764|ref|YP_001927209.1| tRNA-specific 2-thiouridylase MnmA [Methylobacterium populi BJ001]
 gi|179347262|gb|ACB82674.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylobacterium populi BJ001]
          Length = 395

 Score = 62.2 bits (149), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 53/199 (26%), Gaps = 14/199 (7%)

Query: 1   MN--DIIKKA--PSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLC 55
           MN  D+ K       ++  SGG DSS            V  ++   Y        +   C
Sbjct: 11  MNSLDLPKPPHETRVVVAMSGGVDSSVVAGLLKREGYDVVGVTLQLYDHGAATHRKGACC 70

Query: 56  VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
             + I +     +      ++L           S+    A        P   V     + 
Sbjct: 71  AGRDIHDARAVAETLGIPHYVLDYED---RFRESVIDRFAESYLSGETPIPCVECNRSVK 127

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDT------IRAIETAINLGMESHVTVH 169
                 +A  LG   +  G      +     R                     E    + 
Sbjct: 128 FRDLLGMARDLGAEALATGHYVASRAQPEGGRALYRALDPARDQSYFLYATTPEQLAFLR 187

Query: 170 TPLMWLKKYETWKLAQDIG 188
            PL    K ET  LA+++G
Sbjct: 188 FPLGERPKDETRALARELG 206


>gi|218132034|ref|ZP_03460838.1| hypothetical protein BACEGG_03659 [Bacteroides eggerthii DSM 20697]
 gi|317477201|ref|ZP_07936441.1| argininosuccinate synthase [Bacteroides eggerthii 1_2_48FAA]
 gi|217985794|gb|EEC52134.1| hypothetical protein BACEGG_03659 [Bacteroides eggerthii DSM 20697]
 gi|316906637|gb|EFV28351.1| argininosuccinate synthase [Bacteroides eggerthii 1_2_48FAA]
          Length = 402

 Score = 62.2 bits (149), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 54/194 (27%), Gaps = 13/194 (6%)

Query: 4   IIKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +  K    ++ FSGG D S T +  A ++   V     + G  +  +L+       K+  
Sbjct: 1   MEAKKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSPEQLKTNEENAYKLGA 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +             + L +  +    SL   V   +  N      V    I   +  A  
Sbjct: 61  V-----------KYITLDVTQEYYEKSLKYMVFGNVLRNGTYPISVSSERIFQALAIARY 109

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM-WLKKYETW 181
           A  +G   I  G                + A    I              + +L K+   
Sbjct: 110 ANEIGADAIAHGSTGAGNDQIRFDMTFLVMAPGVEIITLTRDMALSRQEEIDYLNKHGFA 169

Query: 182 KLAQDIGGQDLVNL 195
                +     V L
Sbjct: 170 ADFAKLKYSYNVGL 183


>gi|146309153|ref|YP_001189618.1| thiamine biosynthesis protein ThiI [Pseudomonas mendocina ymp]
 gi|189030640|sp|A4XZX0|THII_PSEMY RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|145577354|gb|ABP86886.1| [ThiS-adenylate] sulfurtransferase [Pseudomonas mendocina ymp]
          Length = 484

 Score = 62.2 bits (149), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 54/181 (29%), Gaps = 25/181 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           L+L SGG DS+      + R        F+ G R              ++E+        
Sbjct: 183 LVLMSGGFDSTVAAYQMMRRGLVSHFCFFNLGGRAHELG---------VMEVAHYIWQKF 233

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G    +       +  S   + V  +I      +        + L  A  +A RL I  +
Sbjct: 234 GRSQRV-------LFISVPFEEVVGEILGKVDNSQMGVILKRMMLRAATRVAERLEIEAL 286

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V G   +  S         I +    +         V  PL+   K +    A  IG  +
Sbjct: 287 VTGEAISQVSSQTLTNLAVIDSATDML---------VMRPLIASHKQDIIDTATQIGTAE 337

Query: 192 L 192
            
Sbjct: 338 F 338


>gi|255692370|ref|ZP_05416045.1| argininosuccinate synthase [Bacteroides finegoldii DSM 17565]
 gi|260621836|gb|EEX44707.1| argininosuccinate synthase [Bacteroides finegoldii DSM 17565]
          Length = 402

 Score = 62.2 bits (149), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 57/196 (29%), Gaps = 6/196 (3%)

Query: 4   IIKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +K    ++ FSGG D S T +  A ++   V     + G  +  +L+       K+  
Sbjct: 1   MEEKKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSAEQLKTNEENAYKLGA 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +     D   E +   L  +    +        + +    +       R    +   A  
Sbjct: 61  VKYVTLDVTQEYYEKSLKYM-VFGNVLRNGTYPISVSSERIFQALAIARYANEIGADAIA 119

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK----Y 178
               G  N  I    T     P+    T+             ++  H       K    Y
Sbjct: 120 HGSTGAGNDQIRFDMTFLVLAPNVEIITLTRDMALSRQEEIDYLNKHGFSADFTKLKYSY 179

Query: 179 ETWKLAQDIGGQDLVN 194
                   I G ++++
Sbjct: 180 NVGLWGTSICGGEILD 195


>gi|52841619|ref|YP_095418.1| tRNA-specific 2-thiouridylase MnmA [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|81603374|sp|Q5ZVQ1|MNMA_LEGPH RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|52628730|gb|AAU27471.1| tRNA (5 methylaminomethyl-2-thiouridylate) methyltransferase
           [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
 gi|307610092|emb|CBW99633.1| hypothetical protein LPW_14011 [Legionella pneumophila 130b]
          Length = 361

 Score = 62.2 bits (149), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 51/187 (27%), Gaps = 10/187 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS       ++  +VE L     +++     C     K + +    
Sbjct: 1   MKAKVIVGMSGGVDSSVAAWLLKEQGYQVEGLFMKNWEQDDHNDYCP--AAKDLADAQAV 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   H +            +      + +    PN  V     I        A  L
Sbjct: 59  CNQLRIPLHTVN---FSKEYWDRVFAYFLSEYEKGRTPNPDVLCNKEIKFNAFLNHALTL 115

Query: 127 GITNIVIGVCETD---YSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYETW 181
           G   I  G    +    S     +       +T     +E         P+    K +  
Sbjct: 116 GADYIATGHYAKNTIEGSIGYLFKAKDREKDQTYFLHAVEPEALSKTIFPIGDFTKPQIR 175

Query: 182 KLAQDIG 188
           + A+ +G
Sbjct: 176 EFAKQLG 182


>gi|313206777|ref|YP_004045954.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Riemerella anatipestifer DSM 15868]
 gi|312446093|gb|ADQ82448.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Riemerella anatipestifer DSM 15868]
 gi|315023849|gb|EFT36851.1| tRNA-specific 2-thiouridylase MnmA [Riemerella anatipestifer RA-YM]
 gi|325335784|gb|ADZ12058.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase, contains the PP-loop ATPase domain
           [Riemerella anatipestifer RA-GD]
          Length = 395

 Score = 62.2 bits (149), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 49/189 (25%), Gaps = 13/189 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS        +   V  L         V LE      +   + +   + 
Sbjct: 2   KVVVGLSGGVDSSVAAYLLQQQGHEVIGLFMRNWNDASVTLEDECPWIEDSNDALLVAQK 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 ++ ++ L                +    PN  V     +        A  LG  
Sbjct: 62  LGIPFQVIDMSELYKERIVDYMFEE---YEKGRTPNPDVLCNREVKFDVFMKTALSLGAD 118

Query: 130 NIVIGVCETDYSGYPDCR----------HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            +  G      +   +                        L  E       P+  L K E
Sbjct: 119 KVATGHYARLSTTEDENGTTTYHLLAGKDHNKDQSYFLCQLNQEQLSKALFPIGELTKPE 178

Query: 180 TWKLAQDIG 188
             ++A++IG
Sbjct: 179 VREIAKEIG 187


>gi|332795772|ref|YP_004457272.1| thiamine biosynthesis protein ThiI [Acidianus hospitalis W1]
 gi|332693507|gb|AEE92974.1| thiamine biosynthesis protein ThiI [Acidianus hospitalis W1]
          Length = 467

 Score = 62.2 bits (149), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 62/184 (33%), Gaps = 26/184 (14%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL L SGG DS       + R   ++ L  +    N +          K+++ + +W  
Sbjct: 171 KALALVSGGIDSPVASWMIMKRGVTLDILHCNISGPNNLSSIM------KVIDKIKEWSQ 224

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                  +              K +   ++  ++    V  +  ++L+     A ++G  
Sbjct: 225 GYTPRVFIV----------DCGKIMEAIMKKVDIRLWSVAFKRALYLIAI-NYADKIGAK 273

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      S         ++     + L          PL+   K E  KLA++IG 
Sbjct: 274 AIVTGESLGQVSSQTLSVLSGLQHKIDLLFL---------RPLIGFDKDEIVKLAREIGT 324

Query: 190 QDLV 193
            +L 
Sbjct: 325 FELS 328


>gi|329964694|ref|ZP_08301748.1| putative argininosuccinate synthase [Bacteroides fluxus YIT 12057]
 gi|328525094|gb|EGF52146.1| putative argininosuccinate synthase [Bacteroides fluxus YIT 12057]
          Length = 403

 Score = 62.2 bits (149), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 55/195 (28%), Gaps = 6/195 (3%)

Query: 5   IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           ++K    ++ FSGG D S T +  A ++   V     + G  +  +L+       K+   
Sbjct: 1   MEKKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSPEQLKTNEENAYKLGAK 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                D   E +   L  +    +        + +    +       R    +   A   
Sbjct: 61  EYVTIDVTQEYYEKSLKYM-VFGNVLRNGTYPISVSSERIFQALAIARYANEIGADAIAH 119

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK----YE 179
              G  N  I    T     P     T+             ++  H       K    Y 
Sbjct: 120 GSTGAGNDQIRFDMTFLVMAPGVEIITLTRDMALSRQEEIDYLNKHGFAADFTKLKYSYN 179

Query: 180 TWKLAQDIGGQDLVN 194
                  I G ++++
Sbjct: 180 VGLWGTSICGGEILD 194


>gi|182418877|ref|ZP_02950134.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium butyricum 5521]
 gi|237667388|ref|ZP_04527372.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182377160|gb|EDT74728.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium butyricum 5521]
 gi|237655736|gb|EEP53292.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 360

 Score = 62.2 bits (149), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 51/202 (25%), Gaps = 10/202 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVE 62
           +      L+  SGG DSS       ++   V   +    Q +K   E     C    + +
Sbjct: 1   MSSKKKVLIGMSGGVDSSVAAYLLKEQGYEVIGATMQIWQEDKEFEEREGGCCSLSAVED 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                       ++L      D     + +    +  D   PN  +     +        
Sbjct: 61  ARRVCDKLGIPFYVLN---FRDYFKEKVIEPFIQEYMDGRTPNPCIECNKHLKFDELLRR 117

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK-----K 177
           A  +G   +  G                           + +          +      K
Sbjct: 118 ARGIGADYVATGHYAKIEERDGRYLLIRSDDDSKDQTYALYNFTQDQLAHTLMPCGAYEK 177

Query: 178 YETWKLAQDIGGQDLVNLILEE 199
            +  ++A++IG         EE
Sbjct: 178 TKIREIAKEIGLAVHNKKDSEE 199


>gi|150006743|ref|YP_001301486.1| argininosuccinate synthase [Parabacteroides distasonis ATCC 8503]
 gi|255016527|ref|ZP_05288653.1| argininosuccinate synthase [Bacteroides sp. 2_1_7]
 gi|262384834|ref|ZP_06077966.1| argininosuccinate synthase [Bacteroides sp. 2_1_33B]
 gi|298377705|ref|ZP_06987656.1| argininosuccinate synthase [Bacteroides sp. 3_1_19]
 gi|149935167|gb|ABR41864.1| argininosuccinate synthase [Parabacteroides distasonis ATCC 8503]
 gi|262293550|gb|EEY81486.1| argininosuccinate synthase [Bacteroides sp. 2_1_33B]
 gi|298265408|gb|EFI07070.1| argininosuccinate synthase [Bacteroides sp. 3_1_19]
          Length = 399

 Score = 62.2 bits (149), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 46/172 (26%), Gaps = 12/172 (6%)

Query: 7   KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                ++ FSGG D S T +  A ++   V     + G  ++ +L+       K+     
Sbjct: 1   MKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSEEQLKQNEENAYKLGA--- 57

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                      + + +  +    SL   +   +  N      V    I   +  A  A  
Sbjct: 58  --------TKYVTIDVTKEYYEKSLKYMIFGNVLRNGTYPISVSSERIFQALAIARYANE 109

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
           +G   I  G                + A    I              +   K
Sbjct: 110 IGADAIAHGSTGAGNDQIRFDMTFLVLAPNVEIITLTRDMALSREEEINYLK 161


>gi|148358920|ref|YP_001250127.1| tRNA (5 methylaminomethyl-2-thiouridylate) methyltransferase
           [Legionella pneumophila str. Corby]
 gi|296106968|ref|YP_003618668.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Legionella pneumophila 2300/99 Alcoy]
 gi|205816878|sp|A5IBN1|MNMA_LEGPC RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|148280693|gb|ABQ54781.1| tRNA (5 methylaminomethyl-2-thiouridylate) methyltransferase
           [Legionella pneumophila str. Corby]
 gi|295648869|gb|ADG24716.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Legionella pneumophila 2300/99 Alcoy]
          Length = 361

 Score = 62.2 bits (149), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 51/187 (27%), Gaps = 10/187 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS       ++  +VE L     +++     C     K + +    
Sbjct: 1   MKAKVIVGMSGGVDSSVAAWLLKEQGYQVEGLFMKNWEQDDHNDYCP--AAKDLADAQAV 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   H +            +      + +    PN  V     I        A  L
Sbjct: 59  CNQLRIPLHTVN---FSKEYWDRVFAYFLSEYEKGRTPNPDVLCNKEIKFNAFLNHALNL 115

Query: 127 GITNIVIGVCETD---YSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYETW 181
           G   I  G    +    S     +       +T     +E         P+    K +  
Sbjct: 116 GADYIATGHYAKNTIEGSIGYLFKAKDREKDQTYFLHAVEPEALSKTIFPIGDFTKPQIR 175

Query: 182 KLAQDIG 188
           + A+ +G
Sbjct: 176 EFAKQLG 182


>gi|15639548|ref|NP_218998.1| thiamine biosynthesis protein ThiI [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|6686031|sp|O83570|THII_TREPA RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|3322853|gb|AAC26563.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|291059935|gb|ADD72670.1| thiamine biosynthesis/tRNA modification protein ThiI [Treponema
           pallidum subsp. pallidum str. Chicago]
          Length = 401

 Score = 62.2 bits (149), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 23/181 (12%), Positives = 51/181 (28%), Gaps = 25/181 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS       L R   ++ L F                +KK+ +L               
Sbjct: 191 IDSPVAGYRMLSRGMHIDCLYFH------SYPYTPPEAQKKVEDLAKVLARY-------- 236

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
              L          ++  ++Q +    +      +  +  A  +A       ++ G    
Sbjct: 237 --GLSTTLTVVSLTDIQKQLQTHAPAPSLTLLLRMCMMRIAEHVAREQRARCLITGESLA 294

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
             +          + +E        +H+ +  PL+   K +  + A +IG   +     E
Sbjct: 295 QVAS---------QTLENLTVTSACTHLPIFRPLIGADKEDIIRTATEIGTYAISIRPYE 345

Query: 199 E 199
           +
Sbjct: 346 D 346


>gi|310767364|gb|ADP12314.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Erwinia sp. Ejp617]
          Length = 369

 Score = 62.2 bits (149), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 50/189 (26%), Gaps = 9/189 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +       ++  SGG DSS        +  +VE L        + + E      + + + 
Sbjct: 1   MSNSQKKVIVGMSGGVDSSVSAWLLQQQGFQVEGLFMK--NWEEDDDEAYCTAAEDLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      H +      +   +     +A            +  + I F  F    A
Sbjct: 59  QAVCDKLGIYLHTVN--FAAEYWDNVFEHFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 LG E       P+  L K 
Sbjct: 117 EDLGADYIATGHYVRRQDVGGKSRLLRGLDGNKDQSYFLYTLGHEHIAQSLFPVGELAKP 176

Query: 179 ETWKLAQDI 187
           E  ++A+ +
Sbjct: 177 EVRRIAEQL 185


>gi|182679942|ref|YP_001834088.1| tRNA-specific 2-thiouridylase MnmA [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|205813049|sp|B2IBH3|MNMA_BEII9 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|182635825|gb|ACB96599.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 431

 Score = 61.9 bits (148), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 49/186 (26%), Gaps = 10/186 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +        V  ++   Y     V  +   C  + I +      
Sbjct: 31  RVVVAMSGGVDSSVVAALLKREGYEVIGVTLQLYDHGEAVHRKGACCAGQDIQDARQVAD 90

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L      +     +    A        P   V   + I        A  LG 
Sbjct: 91  QLGIPHYVLD---YEERFRRKVIDPFAQSYATGETPIPCVSCNSEIKFADLFETAQHLGA 147

Query: 129 TNIVIGVCETDYSGYPDCRHDT------IRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
             +  G   +  +     R                          +  PL  L K +  +
Sbjct: 148 DVLATGHYVSSKAEADGGRALYRSLDSSRDQSYFLFATTNAQLELLRFPLGDLAKPDVRQ 207

Query: 183 LAQDIG 188
           +A+ +G
Sbjct: 208 MARQLG 213


>gi|188581765|ref|YP_001925210.1| ExsB family protein [Methylobacterium populi BJ001]
 gi|179345263|gb|ACB80675.1| ExsB family protein [Methylobacterium populi BJ001]
          Length = 210

 Score = 61.9 bits (148), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 66/212 (31%), Gaps = 34/212 (16%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           LL SGG DS+   +W          L+ DYGQR             + + L  +      
Sbjct: 4   LLLSGGLDSAAIAAWQRPD----VCLTVDYGQRPAKGEIAAADSVARELGLRHEIA---- 55

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
               + L+ LG    +    +   +  +      + P RN + +  A       G+T I+
Sbjct: 56  ---RVDLSALGLGPLAGRAASDLARAPE------WWPYRNQMLVTLAGMRFVAEGLTEIL 106

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
           +G   TD                  +    E  V V  P   L   E  + +       +
Sbjct: 107 LGAIRTDVHADGRAPFL---RTVDRLMHLQEGGVRVMAPARHLSALELVRRS------GI 157

Query: 193 VNLILEESHTCYLGKRDKRYEWGYGCNSCPAC 224
              +L  + +C        +   Y C  C  C
Sbjct: 158 PRSLLGATFSC--------HVMEYACGRCRGC 181


>gi|312143962|ref|YP_003995408.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Halanaerobium sp. 'sapolanicus']
 gi|311904613|gb|ADQ15054.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Halanaerobium sp. 'sapolanicus']
          Length = 357

 Score = 61.9 bits (148), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 49/187 (26%), Gaps = 10/187 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVE--TLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              ++  SGG DSS   +   ++   V   T+          + E   C    I +    
Sbjct: 2   KKVMIAMSGGVDSSVAAALLKEKGYEVIGGTMHIFPDYEEATDREDHCCSYSAIRDAKRV 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +       +     L D     +      +      PN  V     I        A  +
Sbjct: 62  AQKLEIPHFVFN---LKDEFQEKVIDYFVYEYSKARTPNPCVMCNKKIKFDALLRKAREI 118

Query: 127 GITNIVIGVCETDYSGY-----PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           G   I  G                 R ++         L  E       PL    K E  
Sbjct: 119 GCDYIATGHYSKIEKNNGRYLLKKGRDESKDQSYMLYVLNQEQLSRALFPLGDFTKQEIR 178

Query: 182 KLAQDIG 188
           + A+++G
Sbjct: 179 QKAKELG 185


>gi|220929349|ref|YP_002506258.1| tRNA-specific 2-thiouridylase MnmA [Clostridium cellulolyticum H10]
 gi|219999677|gb|ACL76278.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium cellulolyticum H10]
          Length = 359

 Score = 61.9 bits (148), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 55/191 (28%), Gaps = 13/191 (6%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL---CVRKKIVELM 64
           +   +L  SGG DSS   +  L +   V  ++    Q    E        C    + +  
Sbjct: 3   SKKVMLGMSGGVDSSVAAAILLRQGYEVIGVTLQIWQDMDEERRKSEGGCCSLSAVDDAR 62

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     ++L      DI   ++ +    +      PN  +     +        A 
Sbjct: 63  RVANKLGIPYYVLN---FKDIFSKTVIEYFKEEYFKGRTPNPCIACNRHVKWQAMLDKAL 119

Query: 125 RLGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWLKK 177
            +GI  I  G            R        D         NL  +       P+    K
Sbjct: 120 SMGIDYIATGHYAKVIQDAETGRFILKKSVTDKKDQTYALYNLTQQQLSHTLMPVGDYTK 179

Query: 178 YETWKLAQDIG 188
            E  ++A++IG
Sbjct: 180 DEIREIAKEIG 190


>gi|148253403|ref|YP_001237988.1| tRNA-specific 2-thiouridylase MnmA [Bradyrhizobium sp. BTAi1]
 gi|205811320|sp|A5ED38|MNMA_BRASB RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|146405576|gb|ABQ34082.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bradyrhizobium sp. BTAi1]
          Length = 397

 Score = 61.9 bits (148), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 48/186 (25%), Gaps = 10/186 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +        V  ++   Y        +   C  + I +     +
Sbjct: 15  RVVVAMSGGVDSSVTAALLKSEGYDVVGITLQLYDHGAATHRKGACCAGQDIHDARNVAE 74

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           S+  N A        P   +     I        A  LG 
Sbjct: 75  RLGIPHYVLDYED---RFRESVIDNFAASYASGETPVPCIECNRAIKFGDLLKTARELGA 131

Query: 129 TNIVIGVCETDYSGYPDCR------HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           + +  G            R                     E    +  PL  + K E  +
Sbjct: 132 SVLATGHYVASRRLADGSRALVCAADADRDQSYFLFATTREQLDYLRFPLGDMTKPEVRE 191

Query: 183 LAQDIG 188
           LA+  G
Sbjct: 192 LARRFG 197


>gi|300716270|ref|YP_003741073.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Erwinia billingiae Eb661]
 gi|299062106|emb|CAX59222.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Erwinia billingiae Eb661]
          Length = 367

 Score = 61.9 bits (148), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 52/189 (27%), Gaps = 9/189 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +       ++  SGG DSS        +  +VE L     + +  E  C     + + + 
Sbjct: 1   MSLSQKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAEDLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      H +      +   +     +             +  + I F  F    A
Sbjct: 59  QAVCDKLGIYLHTVN--FAAEYWDNVFEHFLEEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R      D          LG E       P+  L K 
Sbjct: 117 EDLGADFIATGHYVRRQDVDGKSRLLRGLDDNKDQSYFLYTLGHEQIAQSLFPVGELAKP 176

Query: 179 ETWKLAQDI 187
           +  ++A+++
Sbjct: 177 DVRRIAEEL 185


>gi|183599450|ref|ZP_02960943.1| hypothetical protein PROSTU_02929 [Providencia stuartii ATCC 25827]
 gi|188021697|gb|EDU59737.1| hypothetical protein PROSTU_02929 [Providencia stuartii ATCC 25827]
          Length = 367

 Score = 61.9 bits (148), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 54/193 (27%), Gaps = 11/193 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +V  L     + +  E  C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYQVVGLFMKNWEEDDDEEYCS--AATDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     ++            +  + I F  F  
Sbjct: 57  ADAQSVCDKLGIELHTIN--FAAEYWDNVFEHFLSEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G            +      +          L          P+  L
Sbjct: 115 FAAEDLGADYIATGHYVRRRDVNGKSQLLRGLDNNKDQSYFLYTLSYAQIAKSLFPVGEL 174

Query: 176 KKYETWKLAQDIG 188
           +K E  ++A+++G
Sbjct: 175 EKPEVRRIAEEVG 187


>gi|189025787|ref|YP_001933559.1| thiamine biosynthesis protein ThiI [Treponema pallidum subsp.
           pallidum SS14]
 gi|238689330|sp|B2S3F1|THII_TREPS RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|189018362|gb|ACD70980.1| hypothetical protein TPASS_0559 [Treponema pallidum subsp. pallidum
           SS14]
          Length = 401

 Score = 61.9 bits (148), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/181 (12%), Positives = 51/181 (28%), Gaps = 25/181 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS       L R   ++ L F                +KK+ +L               
Sbjct: 191 IDSPVAGYRMLSRGMHIDCLYFH------SYPYTPPEAQKKVEDLAKVLARY-------- 236

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
              L          ++  ++Q +    +      +  +  A  +A       ++ G    
Sbjct: 237 --GLSTTLTVVSLTDIQKQLQTHAPAPSLTLLLRMCMMRIAEHVAREQRARCLITGESLA 294

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
             +          + +E        +H+ +  PL+   K +  + A +IG   +     E
Sbjct: 295 QVAS---------QTLENLTVTSACTHLPIFRPLIGADKEDIIRTATEIGTYAISIRPYE 345

Query: 199 E 199
           +
Sbjct: 346 D 346


>gi|56460418|ref|YP_155699.1| tRNA-specific 2-thiouridylase MnmA [Idiomarina loihiensis L2TR]
 gi|73920125|sp|Q5QYZ7|MNMA_IDILO RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|56179428|gb|AAV82150.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Idiomarina loihiensis L2TR]
          Length = 371

 Score = 61.9 bits (148), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +   +   ++  SGG DSS      + +  +VE L     + +  +  C       + + 
Sbjct: 1   MSNASKKVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDTDEYCA--ASDDLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
               +    E H +      +   +     +             +  + I F  F    A
Sbjct: 59  EKVCETLGIELHTIN--FAAEYWDNVFEYFLEEYKAGRTPNPDIMCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGY---PDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKY 178
             L    I  G               R       ++     L  E       P+  L+K 
Sbjct: 117 EALDADYIATGHYVRRQQRDGKWEMLRGLDSNKDQSYFLYTLSHEHIAQTLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           E  ++A++ G
Sbjct: 177 EVRRIAEEQG 186


>gi|257784609|ref|YP_003179826.1| thiamine biosynthesis/tRNA modification protein ThiI [Atopobium
           parvulum DSM 20469]
 gi|257473116|gb|ACV51235.1| thiamine biosynthesis/tRNA modification protein ThiI [Atopobium
           parvulum DSM 20469]
          Length = 414

 Score = 61.9 bits (148), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 55/184 (29%), Gaps = 25/184 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L S G DS         R   V  + F       +  +    + + I+E +     
Sbjct: 179 KVVSLLSSGIDSPVATWMVGRRGATVIPVHF---SGRPMTSDTSEYLCQDIIEALES-AG 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G  +++P                 + +         +  R +  +     +A   G  
Sbjct: 235 LIGRMYVVPFG----------EHQREISLAVPQALRIIMYRRVMYIIAQK--IAELEGAK 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      +          + ++    +     + V  PL+   K E  + AQDI  
Sbjct: 283 ALVTGESLGQVAS---------QTLDNIAAVNEAVTIPVLRPLIGSDKQEIIRRAQDINT 333

Query: 190 QDLV 193
            D+ 
Sbjct: 334 FDIS 337


>gi|54297299|ref|YP_123668.1| tRNA-specific 2-thiouridylase MnmA [Legionella pneumophila str.
           Paris]
 gi|81601865|sp|Q5X5H6|MNMA_LEGPA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|53751084|emb|CAH12495.1| hypothetical protein lpp1344 [Legionella pneumophila str. Paris]
          Length = 361

 Score = 61.9 bits (148), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 51/187 (27%), Gaps = 10/187 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS       ++  +VE L     +++     C     K + +    
Sbjct: 1   MKAKVIVGMSGGVDSSVAAWLLKEQGYQVEGLFMKNWEQDDHNDFCP--AAKDLADAQAV 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   H +            +      + +    PN  V     I        A  L
Sbjct: 59  CNQLRIPLHTVN---FSKEYWDRVFAYFLSEYEKGRTPNPDVLCNKEIKFNAFLNHALNL 115

Query: 127 GITNIVIGVCETD---YSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYETW 181
           G   I  G    +    S     +       +T     +E         P+    K +  
Sbjct: 116 GADYIATGHYAKNTIEGSIGYLFKAKDREKDQTYFLHAVEPEALSKTIFPIGDFTKPQIR 175

Query: 182 KLAQDIG 188
           + A+ +G
Sbjct: 176 EFAKQLG 182


>gi|160885588|ref|ZP_02066591.1| hypothetical protein BACOVA_03590 [Bacteroides ovatus ATCC 8483]
 gi|156109210|gb|EDO10955.1| hypothetical protein BACOVA_03590 [Bacteroides ovatus ATCC 8483]
          Length = 402

 Score = 61.9 bits (148), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 56/196 (28%), Gaps = 6/196 (3%)

Query: 4   IIKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +K    ++ FSGG D S T +  A ++   V     + G  ++ +L+       K+  
Sbjct: 1   MEEKKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSEEQLKTNEENAYKLGA 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                   + +++           +        + +    +       R    +   A  
Sbjct: 61  -TKYVTIDVTQEYYEKSLKYMVFGNVLRNGTYPISVSSERIFQALAIARYANEIGADAIA 119

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK----Y 178
               G  N  I    T     P+    T+             ++  H       K    Y
Sbjct: 120 HGSTGAGNDQIRFDMTFLVLAPNVEIITLTRDMALSRQEEIDYLNKHGFSADFTKLKYSY 179

Query: 179 ETWKLAQDIGGQDLVN 194
                   I G ++++
Sbjct: 180 NVGLWGTSICGGEILD 195


>gi|54294275|ref|YP_126690.1| hypothetical protein lpl1340 [Legionella pneumophila str. Lens]
 gi|81601380|sp|Q5WWV9|MNMA_LEGPL RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|53754107|emb|CAH15580.1| hypothetical protein lpl1340 [Legionella pneumophila str. Lens]
          Length = 361

 Score = 61.9 bits (148), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 51/187 (27%), Gaps = 10/187 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS       ++  +VE L     +++     C     K + +    
Sbjct: 1   MKAKVIVGMSGGVDSSVAAWLLKEQGYQVEGLFMKNWEQDDHNDYCP--AAKDLADAQAV 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   H +            +      + +    PN  V     I        A  L
Sbjct: 59  CNQLRIPLHTVN---FSKEYWDRVFAYFLSEYEKGRTPNPDVLCNKEIKFNAFLNYALTL 115

Query: 127 GITNIVIGVCETD---YSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYETW 181
           G   I  G    +    S     +       +T     +E         P+    K +  
Sbjct: 116 GADYIATGHYAKNTIEGSIGYLFKAKDREKDQTYFLHAVEPEALSKTIFPIGDFTKPQIR 175

Query: 182 KLAQDIG 188
           + A+ +G
Sbjct: 176 EFAKQLG 182


>gi|330505378|ref|YP_004382247.1| thiamine biosynthesis protein ThiI [Pseudomonas mendocina NK-01]
 gi|328919664|gb|AEB60495.1| thiamine biosynthesis protein ThiI [Pseudomonas mendocina NK-01]
          Length = 484

 Score = 61.9 bits (148), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 54/181 (29%), Gaps = 25/181 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           L+L SGG DS+      + R        F+ G R              ++E+        
Sbjct: 183 LVLMSGGFDSTVAAYQMMRRGLVSHFCFFNLGGRAHELG---------VMEVAHYIWQKF 233

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G    +       +  S   + V  +I      +        + L  A  +A +L I  +
Sbjct: 234 GRSQRV-------LFISVPFEEVVGEILGKVDNSQMGVILKRMMLRAATRVAEKLQIEAL 286

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V G   +  S         I +    +         V  PL+   K +    A  IG  +
Sbjct: 287 VTGEAISQVSSQTLTNLAVIDSATDML---------VMRPLIASHKQDIIDTATQIGTAE 337

Query: 192 L 192
            
Sbjct: 338 F 338


>gi|269468097|gb|EEZ79807.1| tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase
           [uncultured SUP05 cluster bacterium]
          Length = 367

 Score = 61.9 bits (148), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 39/137 (28%), Gaps = 5/137 (3%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           +    K    ++  SGG DSS      L++   VE L     + +  E  C     + + 
Sbjct: 3   SSTPNKNNKIIVGLSGGVDSSVAALLLLEQGYDVEALFMKNWEEDDSEEHCS--AEQDLS 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +          + H +            +  +   + +    PN  V     I       
Sbjct: 61  DAQKVADKLSIKLHTIN---FSADYWDDVFDHFLKEHKKGRTPNPDVLCNQKIKFKVFLE 117

Query: 122 LAYRLGITNIVIGVCET 138
            A  LG   I  G    
Sbjct: 118 HAILLGADKIATGHYAR 134


>gi|326390968|ref|ZP_08212518.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacter ethanolicus JW 200]
 gi|325993010|gb|EGD51452.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacter ethanolicus JW 200]
          Length = 376

 Score = 61.9 bits (148), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 61/200 (30%), Gaps = 13/200 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL---CVRKKIV 61
           +KK    ++  SGG DSS       ++   V  ++    Q    E        C    + 
Sbjct: 13  MKKNNRVVVGMSGGVDSSVSAYLLKEQGFDVIGVTMQIWQDKDEEAVRVEGGCCSLSAVN 72

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +          + +++      D+    +      +      PN  +     I       
Sbjct: 73  DARRVANKIGIKYYVMN---FKDVFKEKVIDYFVDEYLKGRTPNPCIACNKYIKFEELLK 129

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA-------INLGMESHVTVHTPLMW 174
            A+ +    +  G            R+   ++++T+        NL       +  PL  
Sbjct: 130 RAWMIDAYYVATGHYAIKEYDEERRRYLLKKSVDTSKDQTYVLYNLTQTQLEHILFPLGK 189

Query: 175 LKKYETWKLAQDIGGQDLVN 194
            KK E  +LA+++G      
Sbjct: 190 YKKDEVRELAKNLGLPVASK 209


>gi|296391968|ref|ZP_06881443.1| thiamine biosynthesis protein ThiI [Pseudomonas aeruginosa PAb1]
          Length = 484

 Score = 61.9 bits (148), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 58/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L+L SGG DS+      + R      + F+ G R              ++E+     + 
Sbjct: 182 VLVLMSGGFDSTVAAYQMMRRGMISHFVFFNLGGRAHELG---------VMEVAHYLWEK 232

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G    +       +  S   + V  +I      +        + L  A+ +A RL +  
Sbjct: 233 YGRSQRV-------LFVSVPFEEVVGEILTKVDDSYMGVTLKRMMLRAASRVAERLELDA 285

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G   +  S         I  +   +         V  PL+   K +    A+ IG  
Sbjct: 286 LVTGEAISQVSSQTLPNLSVIDRVTDTL---------VLRPLIVSHKQDIIDTARQIGTA 336

Query: 191 DL 192
           + 
Sbjct: 337 EF 338


>gi|289583106|ref|YP_003481572.1| thiamine biosynthesis protein-like protein [Natrialba magadii ATCC
           43099]
 gi|289532659|gb|ADD07010.1| Thiamine biosynthesis protein-like protein [Natrialba magadii ATCC
           43099]
          Length = 392

 Score = 61.9 bits (148), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 53/180 (29%), Gaps = 24/180 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            + L SGG DS       + R   +  +  D G      ++  +   + +  L     + 
Sbjct: 187 VIALISGGIDSPVAAYEMMRRGSPIVPVYVDLG--AYGGIDHEVRAMETVRTLSRYAPNF 244

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
             + + +P             + V + ++           R           A R+    
Sbjct: 245 DMQVYTVP-----------GGETVDLLVETMEQGRMLSLRRFFYRTAEHL--ASRVDAHG 291

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S          + ++        + + +H PL+   K +    A++I   
Sbjct: 292 IVTGEAVGQKSS---------QTLQNLGVTSRVTRLPIHRPLLTWDKADIVAKAREIDTF 342


>gi|149373068|ref|ZP_01891973.1| argininosuccinate synthetase [unidentified eubacterium SCB49]
 gi|149354295|gb|EDM42863.1| argininosuccinate synthetase [unidentified eubacterium SCB49]
          Length = 397

 Score = 61.9 bits (148), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 48/179 (26%), Gaps = 11/179 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +K +   ++ +SGG D+S C          V  +S + G   + E++       K+    
Sbjct: 1   MKNSKKLVIAYSGGLDTSYCAVSLAKEGYDVHAVSVNTGGFTQKEIKTIEENAYKMGVST 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            K            +  +       +   +   +  NN     V    II  +     A 
Sbjct: 61  YK-----------NIDAIATFYQKVVKYLIFGNVLKNNTYPLSVSAERIIQAIEIIEYAK 109

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            +G   I  G                  A +  I   +          +   K     +
Sbjct: 110 SIGAEYIAHGSTGAGNDQVRFDMIFQTLAPQIKIITPIRDQKLSRQEEIDYLKSNGVDM 168


>gi|291535108|emb|CBL08220.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Roseburia intestinalis M50/1]
          Length = 359

 Score = 61.9 bits (148), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 59/220 (26%), Gaps = 12/220 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL--MP 65
           A   ++  SGG DSS       ++   V  ++    Q     ++        +  +    
Sbjct: 3   AKKVVVGMSGGVDSSVAAYLLKEQGYDVIGVTMQIWQDEDEFVQEESGGCCGLSAVDDAR 62

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +  D LG  + +           ++      +      PN  +     +        +  
Sbjct: 63  RVADRLGIPYYVM--NFKQEFKKNVMDYFTAEYLKGRTPNPCIACNRYVKWEALLNRSLA 120

Query: 126 LGITNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           +G   I  G                +             NL  E       P+    K E
Sbjct: 121 IGADYIATGHYARIEQLSNGRYAIKNSVTAAKDQTYALYNLTQEQLSHTLMPVGAYHKDE 180

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCN 219
             K+A++IG         +E   C++   D        C 
Sbjct: 181 IRKIAEEIGLMVAHKKDSQEI--CFISDNDYAGFIDRECG 218


>gi|212691950|ref|ZP_03300078.1| hypothetical protein BACDOR_01445 [Bacteroides dorei DSM 17855]
 gi|212665342|gb|EEB25914.1| hypothetical protein BACDOR_01445 [Bacteroides dorei DSM 17855]
          Length = 471

 Score = 61.9 bits (148), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/237 (12%), Positives = 64/237 (27%), Gaps = 18/237 (7%)

Query: 12  LLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           + LFSGG DS          L    ++  +S     +   + +  L   ++      K+ 
Sbjct: 147 VALFSGGLDSLIGFIDEASTLSVDKKILLVSHMELGKEHSDQKSILKYCRENNIFSNKY- 205

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E  +L   +     +         + +        +   N I       +     I
Sbjct: 206 ----EQVLLNAGLKPHSWNIKTPTESTFRSRSLLFFAAGIYIVNKISPQCQLIVPENGTI 261

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW-KLAQDI 187
           +  +        S      H T           +    +++ P     K +   +  QD 
Sbjct: 262 SINIPLDSGRRSSCSTRTTHPTFIKRIQEALYAIGISNSIYNPYRLKSKADMVLECCQDT 321

Query: 188 GGQDLVNLILEESHTCY---------LGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
             + ++  +++ S +C              + R      C  C  C  R+       
Sbjct: 322 SKKAILKSLVDLSCSCAKRGHNVFWDKSGIEIRNAKIKHCGMCLPCLYRRVALDTIG 378


>gi|15600311|ref|NP_253805.1| thiamine biosynthesis protein ThiI [Pseudomonas aeruginosa PAO1]
 gi|107104214|ref|ZP_01368132.1| hypothetical protein PaerPA_01005287 [Pseudomonas aeruginosa PACS2]
 gi|218894217|ref|YP_002443086.1| thiamine biosynthesis protein ThiI [Pseudomonas aeruginosa LESB58]
 gi|254238176|ref|ZP_04931499.1| thiazole biosynthesis protein ThiI [Pseudomonas aeruginosa C3719]
 gi|254244001|ref|ZP_04937323.1| thiazole biosynthesis protein ThiI [Pseudomonas aeruginosa 2192]
 gi|313110158|ref|ZP_07796058.1| thiazole biosynthesis protein ThiI [Pseudomonas aeruginosa 39016]
 gi|20140812|sp|Q9HU66|THII_PSEAE RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|226703949|sp|B7V3L1|THII_PSEA8 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|9951416|gb|AAG08503.1|AE004925_1 thiazole biosynthesis protein ThiI [Pseudomonas aeruginosa PAO1]
 gi|126170107|gb|EAZ55618.1| thiazole biosynthesis protein ThiI [Pseudomonas aeruginosa C3719]
 gi|126197379|gb|EAZ61442.1| thiazole biosynthesis protein ThiI [Pseudomonas aeruginosa 2192]
 gi|218774445|emb|CAW30262.1| thiazole biosynthesis protein ThiI [Pseudomonas aeruginosa LESB58]
 gi|310882560|gb|EFQ41154.1| thiazole biosynthesis protein ThiI [Pseudomonas aeruginosa 39016]
          Length = 484

 Score = 61.9 bits (148), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 58/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L+L SGG DS+      + R      + F+ G R              ++E+     + 
Sbjct: 182 VLVLMSGGFDSTVAAYQMMRRGMISHFVFFNLGGRAHELG---------VMEVAHYLWEK 232

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G    +       +  S   + V  +I      +        + L  A+ +A RL +  
Sbjct: 233 YGRSQRV-------LFVSVPFEEVVGEILTKVDDSYMGVTLKRMMLRAASRVAERLELDA 285

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G   +  S         I  +   +         V  PL+   K +    A+ IG  
Sbjct: 286 LVTGEAISQVSSQTLPNLSVIDRVTDTL---------VLRPLIVSHKQDIIDTARQIGTA 336

Query: 191 DL 192
           + 
Sbjct: 337 EF 338


>gi|218263856|ref|ZP_03477825.1| hypothetical protein PRABACTJOHN_03515 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222455|gb|EEC95105.1| hypothetical protein PRABACTJOHN_03515 [Parabacteroides johnsonii
           DSM 18315]
          Length = 471

 Score = 61.9 bits (148), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/237 (12%), Positives = 64/237 (27%), Gaps = 18/237 (7%)

Query: 12  LLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           + LFSGG DS          L    ++  +S     +   + +  L   ++      K+ 
Sbjct: 147 VALFSGGLDSLIGFIDEASTLSVDKKILLVSHMELGKEHSDQKSILEYCRENNIFSNKY- 205

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E  +L   +     +         + +        +   N I       +     I
Sbjct: 206 ----EQVLLNAGLKPHSWNIKTPTESTFRSRSLLFFAAGIYIANKISPQCQLIVPENGTI 261

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW-KLAQDI 187
           +  +        S      H T           +    +++ P     K +   +  QD 
Sbjct: 262 SINIPLDSGRRSSCSTRTTHPTFIKRIQEALYAIGISNSIYNPYRLKSKADMVLECCQDT 321

Query: 188 GGQDLVNLILEESHTCY---------LGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
             + ++  +++ S +C              + R      C  C  C  R+       
Sbjct: 322 SKKAILESLVDLSCSCAKRGHNVFWDKSGIEIRNAKIKHCGMCLPCLYRRVALDTIG 378


>gi|116053265|ref|YP_793588.1| thiamine biosynthesis protein ThiI [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|122256718|sp|Q02EP8|THII_PSEAB RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|115588486|gb|ABJ14501.1| thiamin biosynthesis protein ThiI [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 484

 Score = 61.9 bits (148), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 58/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L+L SGG DS+      + R      + F+ G R              ++E+     + 
Sbjct: 182 VLVLMSGGFDSTVAAYQMMRRGMISHFVFFNLGGRAHELG---------VMEVAHYLWEK 232

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G    +       +  S   + V  +I      +        + L  A+ +A RL +  
Sbjct: 233 YGRSQRV-------LFISVPFEEVVGEILTKVDDSYMGVTLKRMMLRAASRVAERLELDA 285

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G   +  S         I  +   +         V  PL+   K +    A+ IG  
Sbjct: 286 LVTGEAISQVSSQTLPNLSVIDRVTDTL---------VLRPLIVSHKQDIIDTARQIGTA 336

Query: 191 DL 192
           + 
Sbjct: 337 EF 338


>gi|319408925|emb|CBI82582.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bartonella schoenbuchensis R1]
          Length = 409

 Score = 61.9 bits (148), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 45/188 (23%), Gaps = 9/188 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
           +    ++  SGG DSS            V  ++   Y            C  + I +   
Sbjct: 13  ENSRIVVAMSGGVDSSVVAGLLKKEGYDVVGITLQLYDHGVATHRVGSCCAGQDIEDARR 72

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +      ++L      +    ++             P   V     +        A  
Sbjct: 73  IAETLNIPHYVLD---YEERFREAVIDPFTESYTHGETPVPCVACNQTVKFSDLLATARE 129

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTI-----RAIETAINLGMESHVTVHTPLMWLKKYET 180
           LG   +  G      S                          E    +  PL  L K   
Sbjct: 130 LGADALATGHYIRSRSCGAHRALFRPLDAERDQSYFLFATTQEQIDYLRFPLGDLPKARV 189

Query: 181 WKLAQDIG 188
            ++A ++G
Sbjct: 190 REIAAEMG 197


>gi|319935498|ref|ZP_08009933.1| tRNA-specific 2-thiouridylase mnmA [Coprobacillus sp. 29_1]
 gi|319809529|gb|EFW05946.1| tRNA-specific 2-thiouridylase mnmA [Coprobacillus sp. 29_1]
          Length = 379

 Score = 61.9 bits (148), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 22/197 (11%), Positives = 45/197 (22%), Gaps = 17/197 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-----KVELECRLCVR-- 57
           +      +L  SGG DS+       ++   V  +       +              +   
Sbjct: 1   MFMKEKVVLGLSGGVDSAVAAYLLKEQGYEVICVFMRNWDSSLNNDILGNPTNNNEICPQ 60

Query: 58  -KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
            +   +     +    E   +    + +      T  +    +        +     I  
Sbjct: 61  EEDYNDAKKVAEHLGLELRRVD--FIKEYWDHVFTYFLEEYAKGRTPNPDILC-NKHIKF 117

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCR------HDTIRAIETAINLGMESHVTVHT 170
                 A  +    I  G                    +          L      +   
Sbjct: 118 KAFLDYAKSIDADYIATGHYARVEHHLGQDSLMLRGVDNNKDQTYFLCQLNQLQLQSSLF 177

Query: 171 PLMWLKKYETWKLAQDI 187
           P+  L K E  KLA+D+
Sbjct: 178 PIGELTKPEVRKLAEDL 194


>gi|238922133|ref|YP_002935647.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Eubacterium eligens ATCC 27750]
 gi|238873805|gb|ACR73513.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Eubacterium eligens ATCC 27750]
          Length = 355

 Score = 61.9 bits (148), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 50/188 (26%), Gaps = 8/188 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS       ++   V  ++    Q +  E     C     V+   +
Sbjct: 1   MKKKVVVGMSGGVDSSVAAYLLKEQGYDVIGVTMQIWQDDATEAAENGCCGISAVDDARR 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               L   + +      +    ++      + +    PN  +     +        +  +
Sbjct: 61  VAGQLDIPYYVM--NFKNEFKCNVIDYFVDEYKKGRTPNPCIACNRYVKWESLLKRSLEI 118

Query: 127 GITNIVIGVCETDYSGYPDCRHDTI------RAIETAINLGMESHVTVHTPLMWLKKYET 180
           G   I  G     +                        NL  E       P+    K + 
Sbjct: 119 GADYIATGHYARIHQLPNGRYTICNSVTARKDQTYALYNLTQEQLSHTLLPIGDYTKDQV 178

Query: 181 WKLAQDIG 188
            ++A  IG
Sbjct: 179 REIASKIG 186


>gi|189460624|ref|ZP_03009409.1| hypothetical protein BACCOP_01265 [Bacteroides coprocola DSM 17136]
 gi|189432583|gb|EDV01568.1| hypothetical protein BACCOP_01265 [Bacteroides coprocola DSM 17136]
          Length = 374

 Score = 61.9 bits (148), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 51/189 (26%), Gaps = 8/189 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           ++K    L+  SGG DSS       ++   V  ++                   +I+E  
Sbjct: 1   MEKEKRILVGMSGGIDSSATCIMLQEQGYEVVGVTMRTWDIPSHFSTPEQEQPDEILEAK 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +    E H+  +    +   + + +    +      PN  V    +         A 
Sbjct: 61  ALAERLGIEHHVADV---REEFRNVIVQYFIDEYMKGRTPNPCVMCNPLFKERILCEWAD 117

Query: 125 RLGITNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           R G   I            ++         T         L  E    +  PL  + K E
Sbjct: 118 RTGCAQIATGHYCRLEDRKEHRYIVTGDDPTKDQSYFLWKLPQEILKRMVFPLGGMTKTE 177

Query: 180 TWKLAQDIG 188
                 + G
Sbjct: 178 VRAYLAEKG 186


>gi|28210754|ref|NP_781698.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium tetani E88]
 gi|75542643|sp|Q896F5|MNMA1_CLOTE RecName: Full=tRNA-specific 2-thiouridylase mnmA 1
 gi|28203192|gb|AAO35635.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium tetani E88]
          Length = 362

 Score = 61.9 bits (148), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 57/211 (27%), Gaps = 15/211 (7%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDY--GQRNKVELECRLCVRKKIVELMPKWKDSLG 72
            SGG DSS       ++   V  ++     G  +    E    + K   E+    +    
Sbjct: 13  MSGGVDSSVTAYLLKEQGYDVIGMTMKVFPGNYHDGSKEKIEDIMKSAKEVCDFLEIPFV 72

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           E  ++      +  +  +         +   PN  V     I        A  LG   I 
Sbjct: 73  EVDLI------EEFNKKVATPFMQDYIEGRTPNPCVYCNKHIKFDAFLNKAIELGADYIA 126

Query: 133 IGVCETD-----YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            G           +       +         NL       +  P     K +  ++A+ I
Sbjct: 127 TGHYANIIEKDGRTLIYRAEDENKDQTYMLYNLKQHQLKHILMPCGDYNKEQIREIAKKI 186

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGC 218
           G +       EE   C++   D        C
Sbjct: 187 GLKIHNKKDSEEI--CFIPDDDHGRYIRENC 215


>gi|152989134|ref|YP_001351170.1| thiamine biosynthesis protein ThiI [Pseudomonas aeruginosa PA7]
 gi|189030639|sp|A6VDN5|THII_PSEA7 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|150964292|gb|ABR86317.1| thiamine biosynthesis/tRNA modification protein ThiI [Pseudomonas
           aeruginosa PA7]
          Length = 484

 Score = 61.9 bits (148), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 58/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L+L SGG DS+      + R      + F+ G R              ++E+     + 
Sbjct: 182 VLVLMSGGFDSTVAAYQMMRRGMISHFVFFNLGGRAHELG---------VMEVAHYLWEK 232

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G    +       +  S   + V  +I      +        + L  A+ +A RL +  
Sbjct: 233 YGRSQRV-------LFVSVPFEEVVGEILTKVDDSYMGVTLKRMMLRAASRVAERLELDA 285

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G   +  S         I  +   +         V  PL+   K +    A+ IG  
Sbjct: 286 LVTGEAISQVSSQTLPNLSVIDRVTDTL---------VLRPLIVSHKQDIIDTARQIGTA 336

Query: 191 DL 192
           + 
Sbjct: 337 EF 338


>gi|259908739|ref|YP_002649095.1| tRNA-specific 2-thiouridylase MnmA [Erwinia pyrifoliae Ep1/96]
 gi|224964361|emb|CAX55870.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Erwinia pyrifoliae Ep1/96]
          Length = 369

 Score = 61.9 bits (148), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 50/189 (26%), Gaps = 9/189 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +       ++  SGG DSS        +  +VE L        + + E      + + + 
Sbjct: 1   MSNSQKKVIVGMSGGVDSSVSAWLLQQQGFQVEGLFMK--NWEEDDDEAYCTAAEDLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      H +      +   +     +A            +  + I F  F    A
Sbjct: 59  QAVCDKLGIYLHTVN--FAAEYWDNVFEHFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 LG E       P+  L K 
Sbjct: 117 EDLGADYIATGHYVRRQDMGGKSRLLRGLDGNKDQSYFLYTLGHEHIAQSLFPVGELAKP 176

Query: 179 ETWKLAQDI 187
           E  ++A+ +
Sbjct: 177 EVRRIAEQL 185


>gi|260462497|ref|ZP_05810704.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mesorhizobium opportunistum WSM2075]
 gi|259031693|gb|EEW32962.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mesorhizobium opportunistum WSM2075]
          Length = 396

 Score = 61.9 bits (148), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 47/188 (25%), Gaps = 9/188 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
           +    ++  SGG DSS            V  ++   Y            C  + I +   
Sbjct: 11  ENTRIVVAMSGGVDSSVVAGLLKREGYDVVGVTLQLYDHGAATHRAGSCCAGQDIDDARR 70

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +      ++L      +    ++    A        P   V     +        A  
Sbjct: 71  VSETLGIPHYVLD---YEERFRKAVIDPFAESYVAGETPIPCVSCNQTVKFADLLATAKE 127

Query: 126 LGITNIVIGVCETDYSGYPD---CRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYET 180
           LG   +  G      +        R       ++            +       L K + 
Sbjct: 128 LGADALATGHYIRSGANGAHRALYRPVDADRDQSYFLFATTQAQIDYLRFPLGGLSKPQV 187

Query: 181 WKLAQDIG 188
             +A+++G
Sbjct: 188 RAIAEEMG 195


>gi|254459256|ref|ZP_05072678.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacterales bacterium GD 1]
 gi|207084149|gb|EDZ61439.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacterales bacterium GD 1]
          Length = 344

 Score = 61.9 bits (148), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 48/182 (26%), Gaps = 10/182 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS            V  +        +   E  +   KK+   +  
Sbjct: 1   MNKKVIVGMSGGIDSSVTAYLLQQEGYEVIGVYMKLHDLIENFHEDNIASGKKVARSL-- 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 E HIL L+                +  + N PN  V     I        A   
Sbjct: 59  ----GIEYHILDLSSKFKEEVYDYFV---GEYLNGNTPNPCVKCNRTIKFGALFDFAKEQ 111

Query: 127 GITNIVIGVCET-DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           G   +  G     D         DT         +  +    +  P+   +K E  KL  
Sbjct: 112 GADFLATGHYAKTDGEFIYKAEDDTKDQSYFLAQIKQDVLKHLIFPMNKYRKTEIVKLGS 171

Query: 186 DI 187
            +
Sbjct: 172 TL 173


>gi|24638328|sp|Q98HL0|MNMA_RHILO RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 396

 Score = 61.9 bits (148), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 47/188 (25%), Gaps = 9/188 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
           +    ++  SGG DSS            V  ++   Y            C  + I +   
Sbjct: 11  ENTRIVVAMSGGVDSSVVAGLLKREGYDVVGVTLQLYDHGAATHRAGSCCAGQDIDDARR 70

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +      ++L      +    ++    A        P   V     +        A  
Sbjct: 71  VSETLGIPHYVLD---YEERFRKAVIDPFAESYVAGETPIPCVSCNQTVKFADLLATAKE 127

Query: 126 LGITNIVIGVCETDYSGYPD---CRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYET 180
           LG   +  G      +        R       ++            +       L K + 
Sbjct: 128 LGADALATGHYIRSGANGAHRALYRPVDADRDQSYFLFATTQAQIDYLRFPLGGLSKPQV 187

Query: 181 WKLAQDIG 188
             +A+++G
Sbjct: 188 RAIAEEMG 195


>gi|256752949|ref|ZP_05493777.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacter ethanolicus CCSD1]
 gi|256748170|gb|EEU61246.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacter ethanolicus CCSD1]
          Length = 376

 Score = 61.9 bits (148), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 61/200 (30%), Gaps = 13/200 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL---CVRKKIV 61
           +KK    ++  SGG DSS       ++   V  ++    Q    E        C    + 
Sbjct: 13  MKKNNRVVVGMSGGVDSSVSAYLLKEQGFDVIGVTMQIWQDKDEEAVRVEGGCCSLSAVN 72

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +          + +++      D+    +      +      PN  +     I       
Sbjct: 73  DARRVANKIGIKYYVMN---FKDVFKEKVIDYFVDEYLKGRTPNPCIACNKYIKFEELLK 129

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA-------INLGMESHVTVHTPLMW 174
            A+ +    +  G            R+   ++++T+        NL       +  PL  
Sbjct: 130 RAWMIDAYYVATGHYAVKEYDEERGRYLLKKSVDTSKDQTYVLYNLTQTQLEHILFPLGK 189

Query: 175 LKKYETWKLAQDIGGQDLVN 194
            KK E  +LA+++G      
Sbjct: 190 YKKDEVRELAKNLGLPVASK 209


>gi|20808819|ref|NP_623990.1| tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Thermoanaerobacter tengcongensis MB4]
 gi|24638308|sp|Q8R7F0|MNMA2_THETN RecName: Full=tRNA-specific 2-thiouridylase mnmA 2
 gi|20517470|gb|AAM25594.1| predicted tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase, contains the PP-loop ATPase domain
           [Thermoanaerobacter tengcongensis MB4]
          Length = 364

 Score = 61.9 bits (148), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 61/200 (30%), Gaps = 13/200 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL---CVRKKIV 61
           ++K    ++  SGG DSS       ++   V  ++    Q    E        C    + 
Sbjct: 1   MQKNNRVVVGMSGGVDSSVAAYLLKEQGYEVIGVTMQIWQDKDEEAVRVEGGCCSLAAVN 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +          + +++    +          +  ++ +  N     +     I       
Sbjct: 61  DARRVANKIGIKYYVMNFKDVFKEKVIDYFVDEYLRGRTPNPC---IACNKYIKFEELLK 117

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA-------INLGMESHVTVHTPLMW 174
            A+ +    +  G            R+   ++++T+        NL       +  PL  
Sbjct: 118 RAWMIDAYYVATGHYAIKEYDEERGRYLLKKSVDTSKDQTYVLYNLTQTQLEHILFPLGK 177

Query: 175 LKKYETWKLAQDIGGQDLVN 194
            KK +  +LA+++G      
Sbjct: 178 YKKDKVRELAKNLGLPVASK 197


>gi|229826315|ref|ZP_04452384.1| hypothetical protein GCWU000182_01687 [Abiotrophia defectiva ATCC
           49176]
 gi|229789185|gb|EEP25299.1| hypothetical protein GCWU000182_01687 [Abiotrophia defectiva ATCC
           49176]
          Length = 360

 Score = 61.9 bits (148), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 37/133 (27%), Gaps = 4/133 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            A   ++  SGG DSS        +   V  ++ D      V+     C+  +  E   K
Sbjct: 1   MAKKVVVGLSGGVDSSVAAYLLKKQGYEVYGVTMDIWTEGAVDTVNGGCLGSQAKEDARK 60

Query: 67  WKDSL-GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             ++L     ++ +      +  +   +     +  N             L      A  
Sbjct: 61  VAETLDIPYKVVDVRGKFRENVMNYFADSYKNGETPNPCTLCNRRVKWEALFKG---AEL 117

Query: 126 LGITNIVIGVCET 138
            G   +  G    
Sbjct: 118 FGAEYVATGHYAK 130


>gi|261821429|ref|YP_003259535.1| tRNA-specific 2-thiouridylase MnmA [Pectobacterium wasabiae WPP163]
 gi|261605442|gb|ACX87928.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pectobacterium wasabiae WPP163]
          Length = 368

 Score = 61.9 bits (148), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 53/192 (27%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +   VE L     + +     C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYHVEGLFMKNWEEDDDTEYCS--AATDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +             +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G     +      R                 LG E       P+  L
Sbjct: 115 FAAEDLGADYIATGHYVRRHDVDGKSRLLRGMDGNKDQSYFLYTLGHEQIAQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K +  K+A+++
Sbjct: 175 EKPQVRKIAEEL 186


>gi|205815324|sp|B0KC14|MNMA1_THEP3 RecName: Full=tRNA-specific 2-thiouridylase mnmA 1
          Length = 364

 Score = 61.9 bits (148), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 61/200 (30%), Gaps = 13/200 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL---CVRKKIV 61
           +KK    ++  SGG DSS       ++   V  ++    Q    E        C    + 
Sbjct: 1   MKKNNRVVVGMSGGVDSSVSAYLLKEQGFDVIGVTMQIWQDKDEEAVRVEGGCCSLSAVN 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +          + +++      D+    +      +      PN  +     I       
Sbjct: 61  DARRVANKIGIKYYVMN---FKDVFKEKVIDYFVDEYLKGRTPNPCIACNKYIKFEELLK 117

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA-------INLGMESHVTVHTPLMW 174
            A+ +    +  G            R+   ++++T+        NL       +  PL  
Sbjct: 118 RAWMIDAYYVATGHYAIKEYDEERGRYLLKKSVDTSKDQTYVLYNLTQTQLEHILFPLGK 177

Query: 175 LKKYETWKLAQDIGGQDLVN 194
            KK E  +LA+++G      
Sbjct: 178 YKKDEVRELAKNLGLPVASK 197


>gi|167036708|ref|YP_001664286.1| tRNA-specific 2-thiouridylase MnmA [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320115132|ref|YP_004185291.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacter brockii subsp. finnii Ako-1]
 gi|166855542|gb|ABY93950.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|319928223|gb|ADV78908.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacter brockii subsp. finnii Ako-1]
          Length = 376

 Score = 61.9 bits (148), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 61/200 (30%), Gaps = 13/200 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL---CVRKKIV 61
           +KK    ++  SGG DSS       ++   V  ++    Q    E        C    + 
Sbjct: 13  MKKNNRVVVGMSGGVDSSVSAYLLKEQGFDVIGVTMQIWQDKDEEAVRVEGGCCSLSAVN 72

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +          + +++      D+    +      +      PN  +     I       
Sbjct: 73  DARRVANKIGIKYYVMN---FKDVFKEKVIDYFVDEYLKGRTPNPCIACNKYIKFEELLK 129

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA-------INLGMESHVTVHTPLMW 174
            A+ +    +  G            R+   ++++T+        NL       +  PL  
Sbjct: 130 RAWMIDAYYVATGHYAIKEYDEERGRYLLKKSVDTSKDQTYVLYNLTQTQLEHILFPLGK 189

Query: 175 LKKYETWKLAQDIGGQDLVN 194
            KK E  +LA+++G      
Sbjct: 190 YKKDEVRELAKNLGLPVASK 209


>gi|218264284|ref|ZP_03478141.1| hypothetical protein PRABACTJOHN_03832 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222121|gb|EEC94771.1| hypothetical protein PRABACTJOHN_03832 [Parabacteroides johnsonii
           DSM 18315]
          Length = 399

 Score = 61.9 bits (148), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 46/172 (26%), Gaps = 12/172 (6%)

Query: 7   KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                ++ FSGG D S T +  A ++   V     + G  ++ +L+       K+     
Sbjct: 1   MKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSEEQLKQNEENAYKLGA--- 57

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                      + + +  +    SL   V   +  N      V    I   +  A  A  
Sbjct: 58  --------TKYVTIDVTKEYYEKSLKYMVFGNVLRNGTYPISVSSERIFQALAIARYANE 109

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
           +G   I  G                + A    I              +   K
Sbjct: 110 IGADAIAHGSTGAGNDQIRFDMTFLVLAPNVEIITLTRDMALSRDYEINYLK 161


>gi|154491665|ref|ZP_02031291.1| hypothetical protein PARMER_01276 [Parabacteroides merdae ATCC
           43184]
 gi|154087906|gb|EDN86951.1| hypothetical protein PARMER_01276 [Parabacteroides merdae ATCC
           43184]
          Length = 399

 Score = 61.9 bits (148), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 46/172 (26%), Gaps = 12/172 (6%)

Query: 7   KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                ++ FSGG D S T +  A ++   V     + G  ++ +L+       K+     
Sbjct: 1   MKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSEEQLKQNEENAYKLGA--- 57

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                      + + +  +    SL   V   +  N      V    I   +  A  A  
Sbjct: 58  --------TKYVTIDVTKEYYEKSLKYMVFGNVLRNGTYPISVSSERIFQALAIARYANE 109

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
           +G   I  G                + A    I              +   K
Sbjct: 110 IGADAIAHGSTGAGNDQIRFDMTFLVLAPNVEIITLTRDMALSRDYEINYLK 161


>gi|149921054|ref|ZP_01909513.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Plesiocystis pacifica SIR-1]
 gi|149818058|gb|EDM77515.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Plesiocystis pacifica SIR-1]
          Length = 367

 Score = 61.5 bits (147), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 60/189 (31%), Gaps = 10/189 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS   +  ++    V  L+   Y  + + +     C     ++L  +  
Sbjct: 2   RVVCAMSGGVDSSVAAALMVEAGHEVIGLTMALYDAKGERKGRGGTCCSPAEIDLARRAC 61

Query: 69  DSLG-EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           D LG   + +      +   +++  + A +      PN        +        A  LG
Sbjct: 62  DLLGVPHYTVDE---RERFQAAVIDDFAREYLAGRTPNPCARCNEHVKFGPLLARARALG 118

Query: 128 ITNIVIGVCETDYSGYPDCRHDT-----IRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              +V G       G                      +G E+   V  PL    K +  +
Sbjct: 119 AELLVTGHYAQIVDGEAGPALHRGVDASKDQSYFLFAMGRETLAEVAFPLGAWSKAQVRE 178

Query: 183 LAQDIGGQD 191
            A+++G  +
Sbjct: 179 KARELGMPN 187


>gi|256842259|ref|ZP_05547763.1| argininosuccinate synthase [Parabacteroides sp. D13]
 gi|301309009|ref|ZP_07214954.1| argininosuccinate synthase [Bacteroides sp. 20_3]
 gi|256736143|gb|EEU49473.1| argininosuccinate synthase [Parabacteroides sp. D13]
 gi|300833035|gb|EFK63660.1| argininosuccinate synthase [Bacteroides sp. 20_3]
          Length = 399

 Score = 61.5 bits (147), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 46/172 (26%), Gaps = 12/172 (6%)

Query: 7   KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                ++ FSGG D S T +  A ++   V     + G  ++ +L+       K+     
Sbjct: 1   MKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSEEQLKQNEENAYKLGA--- 57

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                      + + +  +    SL   +   +  N      V    I   +  A  A  
Sbjct: 58  --------TKYVTIDVTKEYYEKSLKYMIFGNVLRNGTYPISVSSERIFQALAIARYANE 109

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
           +G   I  G                + A    I              +   K
Sbjct: 110 IGADAIAHGSTGAGNDQIRFDMTFLVLAPNVEIITLTRDMALSRDFEINYLK 161


>gi|224536323|ref|ZP_03676862.1| hypothetical protein BACCELL_01195 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522062|gb|EEF91167.1| hypothetical protein BACCELL_01195 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 401

 Score = 61.5 bits (147), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 55/195 (28%), Gaps = 6/195 (3%)

Query: 5   IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +++    ++ FSGG D S T +  A ++   V     + G  +  +L+       K+   
Sbjct: 1   MEEKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSPEQLKTNEENAYKLGAK 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                D   E +   L  +    +        + +    +       R    +   A   
Sbjct: 61  EYVTIDVTQEYYEKSLKYM-VFGNVLRNGTYPISVSSERIFQALAIARYANEIGADAIAH 119

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK----YE 179
              G  N  I    T     P     T+             ++  H       K    Y 
Sbjct: 120 GSTGAGNDQIRFDMTFLVLAPGVEIITLTRDMALSRQEEIDYLNKHGFSADFTKLKYSYN 179

Query: 180 TWKLAQDIGGQDLVN 194
                  I G ++++
Sbjct: 180 VGLWGTSICGGEILD 194


>gi|205822138|sp|Q21AM9|MNMA_RHOPB RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 400

 Score = 61.5 bits (147), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 51/186 (27%), Gaps = 10/186 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSST  +        V  ++   Y     +  +   C  + I +      
Sbjct: 15  RIVVAMSGGVDSSTTAALLKSEGYDVVGITLQLYDHGAAIHRKGACCAGQDIHDARAVAD 74

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           S+  + A        P   +     I      + A  LG 
Sbjct: 75  RIGIPHYVLD---YESRFQESVIDSFAASYATGETPVPCIECNRSIKFRDLLSTARELGA 131

Query: 129 TNIVIGVCETDYSGYP------DCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           + +  G   +                              +    +  PL  + K +T +
Sbjct: 132 SALATGHYVSSRRLADGSRALVCASDADRDQSYFLFATTRDQLDYLRFPLGDMTKPQTRE 191

Query: 183 LAQDIG 188
           LA+  G
Sbjct: 192 LARKFG 197


>gi|238926764|ref|ZP_04658524.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Selenomonas flueggei ATCC 43531]
 gi|238885296|gb|EEQ48934.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Selenomonas flueggei ATCC 43531]
          Length = 366

 Score = 61.5 bits (147), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 47/192 (24%), Gaps = 11/192 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--QRNKVELECRLCVRKKIVELM 64
           +    ++  SGG DSS   +   ++   V  ++       R+        C    + +  
Sbjct: 7   EKQRVVVAMSGGVDSSVTAALLQEQGYEVVGVTMRLSEEGRDADPDGRSCCSLSSVDDAR 66

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     +++                          PN  +     I          
Sbjct: 67  RVADILGIPHYVMDFTEPFQQLVIDYFTQE---YARGRTPNPCIACNRYIKFEGLLGKIR 123

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDT------IRAIETAINLGMESHVTVHTPLMWLKKY 178
            LG  +I  G             H                +L  +    V  PL   +K 
Sbjct: 124 ALGAQHIATGHYARITRTGDGIYHLRKGIDTAKDQSYVLYHLTQKMMDHVLFPLGDYRKD 183

Query: 179 ETWKLAQDIGGQ 190
           E   +A+D G  
Sbjct: 184 EIRHMAEDYGLP 195


>gi|14521954|ref|NP_127431.1| hypothetical protein PAB1152 [Pyrococcus abyssi GE5]
 gi|5459174|emb|CAB50660.1| Predicted ATPase of the PP-loop superfamily [Pyrococcus abyssi GE5]
          Length = 274

 Score = 61.5 bits (147), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 38/114 (33%), Gaps = 1/114 (0%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           + +I++K   A++ +SGG+DS+  L  A       VE +  D+G      +E    + + 
Sbjct: 45  LEEILRKVDKAIVAYSGGKDSTVALYLAKVKYGIDVEAVMVDHGFMASQAIENAKRIAEH 104

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
           +   +   K    +     L            + + +  +              
Sbjct: 105 LNVPLTIIKKDYSDIFREALLKAKSPCRKCSKRTMEILRKYAIEHGYRYIITGH 158


>gi|253989217|ref|YP_003040573.1| tRNA -specific 2-thiouridylase MnmA [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253780667|emb|CAQ83829.1| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Photorhabdus asymbiotica]
          Length = 367

 Score = 61.5 bits (147), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 54/193 (27%), Gaps = 11/193 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +V  L     + +  E  C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYQVAGLFMKNWEEDDNEEYCS--AATDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     ++            +  + I F  F  
Sbjct: 57  ADAQSVCDKLDIELHTVN--FAAEYWDNVFEHFLSEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G            +      +          L  +       P+  L
Sbjct: 115 FAAEDLGADYIATGHYVRRKDINGKSQLLRGLDNNKDQSYFLYTLNHQQIAQSLFPVGEL 174

Query: 176 KKYETWKLAQDIG 188
           +K E  ++A+ IG
Sbjct: 175 EKPEVRRIAEKIG 187


>gi|291522307|emb|CBK80600.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Coprococcus catus GD/7]
          Length = 368

 Score = 61.5 bits (147), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 54/189 (28%), Gaps = 10/189 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL--MP 65
           +   ++  SGG DSS        +   V  ++    Q  + E+         +  +    
Sbjct: 3   SKKVVVGMSGGVDSSVAAWLLKQQGYDVIGVTMQIWQEEEDEIVEENGGCCGLSAVDDAR 62

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +  + +G  + +      ++    +  N   + +    PN  +     +        A  
Sbjct: 63  RVAERIGIPYYVM--NFREVFREKVIDNFVSEYEKGRTPNPCIVCNRYVKWEALLEKALA 120

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMWLKKYE 179
           LG   I  G                  A +         NL          P+    K E
Sbjct: 121 LGADYIATGHYARIVHLPNGRYAIEKAAFDRKDQTYALYNLNQHQLAHTLMPVGAYDKSE 180

Query: 180 TWKLAQDIG 188
             ++A +IG
Sbjct: 181 VRRIAGEIG 189


>gi|188586399|ref|YP_001917944.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|205816905|sp|B2A5K1|MNMA_NATTJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|179351086|gb|ACB85356.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 368

 Score = 61.5 bits (147), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 41/162 (25%), Gaps = 4/162 (2%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +  +   L+  SGG DSS       ++   V         R + E      V K    L 
Sbjct: 1   MMMSNRVLVAMSGGVDSSVAALMLKEQGYEVIGAHMRIWYREEDEELYEQNV-KGCCSLA 59

Query: 65  PKWKDSLGEDHI---LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                    D I     +    +  +  + KN   +      PN  +     I       
Sbjct: 60  AVHDAKRVADKIGIPFYVLNFKEPFYDWVVKNFIDEYLQGRTPNPCIACNRFIKWEEFLK 119

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME 163
            A  L    I  G            R+   R  +   +    
Sbjct: 120 RAMALECDYIATGHYSKIVYDNLKNRYLLYRGKDKTKDQSYM 161


>gi|90422506|ref|YP_530876.1| tRNA-specific 2-thiouridylase MnmA [Rhodopseudomonas palustris
           BisB18]
 gi|90104520|gb|ABD86557.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhodopseudomonas palustris BisB18]
          Length = 404

 Score = 61.5 bits (147), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 51/186 (27%), Gaps = 10/186 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSST  +        V  ++   Y     +  +   C  + I +      
Sbjct: 19  RIVVAMSGGVDSSTTAALLKSEGYDVVGITLQLYDHGAAIHRKGACCAGQDIHDARAVAD 78

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           S+  + A        P   +     I      + A  LG 
Sbjct: 79  RIGIPHYVLD---YESRFQESVIDSFAASYATGETPVPCIECNRSIKFRDLLSTARELGA 135

Query: 129 TNIVIGVCETDYSGYP------DCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           + +  G   +                              +    +  PL  + K +T +
Sbjct: 136 SALATGHYVSSRRLADGSRALVCASDADRDQSYFLFATTRDQLDYLRFPLGDMTKPQTRE 195

Query: 183 LAQDIG 188
           LA+  G
Sbjct: 196 LARKFG 201


>gi|325955195|ref|YP_004238855.1| tRNA-specific 2-thiouridylase mnmA [Weeksella virosa DSM 16922]
 gi|323437813|gb|ADX68277.1| tRNA-specific 2-thiouridylase mnmA [Weeksella virosa DSM 16922]
          Length = 397

 Score = 61.5 bits (147), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 52/189 (27%), Gaps = 13/189 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS       ++   V  L         V LE      +   + +   +
Sbjct: 2   KRVVVGLSGGVDSSVAAYLLKEQGYEVIGLFMRNWNDASVTLEDECPWIEDSADALLTAE 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                  ++ ++         +   +  + +    PN  V     I        A  LG 
Sbjct: 62  KLNIPFQVIDMS---ASYKERIVDYMFAEYEQGRTPNPDVLCNREIKFDLFLKTALELGA 118

Query: 129 TNIVIGVCETDYSGYPDCR----------HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             +  G      S                 +          L  E       P+  L+K 
Sbjct: 119 DYVATGHYARKNSFIDKNGKEIFQLIKGVDNNKDQSYFLCQLSQEQLSKALFPIGNLEKS 178

Query: 179 ETWKLAQDI 187
           E  ++A+++
Sbjct: 179 EVRRIAKNL 187


>gi|140063954|gb|ABO82466.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Liberibacter asiaticus]
          Length = 408

 Score = 61.5 bits (147), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 58/199 (29%), Gaps = 16/199 (8%)

Query: 3   DIIKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKK 59
           D+ K       ++  SGG DSS   +        V  ++   Y  R   + +   C  + 
Sbjct: 13  DLDKNPKDMRVVVAMSGGVDSSVVAALLKRDGYDVIGVTVQLYNSRKASKRKGSCCAGQD 72

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           + +            ++       +   +++    A        P   V     +     
Sbjct: 73  VYDARRVCDTINVSHYVFD---YEERFRNAVIVPFASSYAAGETPLPCVDCNRTVKFSDL 129

Query: 120 ATLAYRLGITNIVIGVCETDY--------SGYPDCRHDTIRAIETAINLG--MESHVTVH 169
            ++  +LG   +  G                   CR   +   ++        +    + 
Sbjct: 130 LSVTRQLGADVLATGHYIRSRLYVGDDGKRRRIMCRPMDLERDQSYFLFATTQQQLCDLR 189

Query: 170 TPLMWLKKYETWKLAQDIG 188
            PL  +KK     LA+++G
Sbjct: 190 FPLGDMKKESVRDLAREMG 208


>gi|13508289|ref|NP_110239.1| thiamin biosynthesis protein [Mycoplasma pneumoniae M129]
 gi|2501551|sp|P75228|THII_MYCPN RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|1673963|gb|AAB95940.1| Thiamin biosynthesis protein [Mycoplasma pneumoniae M129]
 gi|301633604|gb|ADK87158.1| thiamine biosynthesis/tRNA modification protein ThiI [Mycoplasma
           pneumoniae FH]
          Length = 387

 Score = 61.5 bits (147), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 59/195 (30%), Gaps = 26/195 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           + +AL L SGG DS    S  L R   V+ ++F     +      ++     +V L    
Sbjct: 179 SGTALALLSGGIDSPVAASLVLQRGFNVDFITFINEPGHNAATIGKIQRLANLVSLNQTL 238

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G   +     L                Q      +    R ++       +A    
Sbjct: 239 C--TGRLFVFDFTDL----------------QKELSHISLEGYRIVLMRRCFYKIASLFK 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              ++ G      +         I+A+          +  V  PL+ L K +  + A+ +
Sbjct: 281 YDCLITGEALGQVASQTIDNLKVIQAV--------VPNTFVIRPLIGLSKDKIIEWAKAL 332

Query: 188 GGQDLVNLILEESHT 202
           G  +       ++ T
Sbjct: 333 GTFETSIEHHMDTCT 347


>gi|304436306|ref|ZP_07396284.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304370711|gb|EFM24358.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 361

 Score = 61.5 bits (147), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 56/219 (25%), Gaps = 13/219 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ--RNKVELECRLCVRKKIVELM 64
           +    ++  SGG DSS   +   ++   V  ++    +  R+        C    + +  
Sbjct: 2   EKQRVVVAMSGGVDSSVTAALLQEQGYEVVGVTMRLSEEARDADLDGRSCCSLSSVDDAR 61

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     +++                          PN  +     I          
Sbjct: 62  RVADILGIPHYVMDFTDPFQRLVIDYFTQE---YARGRTPNPCIACNRYIKFEGLLEKTR 118

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDT------IRAIETAINLGMESHVTVHTPLMWLKKY 178
            LG   I  G             H                +L  E    V  PL   +K 
Sbjct: 119 ALGAQYIATGHYARITHTEDGTYHLRKGIDAAKDQSYVLYHLTQEMMDHVLFPLGDYRKD 178

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
           E  ++A+D G         +E   C++ + D +      
Sbjct: 179 EIRRMAEDYGLPVAHKAESQEI--CFVPRDDYKSYLRTH 215


>gi|205815331|sp|B0K584|MNMA1_THEPX RecName: Full=tRNA-specific 2-thiouridylase mnmA 1
          Length = 364

 Score = 61.5 bits (147), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 61/200 (30%), Gaps = 13/200 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL---CVRKKIV 61
           +KK    ++  SGG DSS       ++   V  ++    Q    E        C    + 
Sbjct: 1   MKKNNRVVVGMSGGVDSSVSAYLLKEQGFDVIGVTMQIWQDKDEEAVRVEGGCCSLSAVN 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +          + +++    +          +  ++ +  N     +     I       
Sbjct: 61  DARRVANKIGIKYYVMNFKDVFKEKVIDYFVDEYLRGRTPNPC---IACNKYIKFEELLK 117

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA-------INLGMESHVTVHTPLMW 174
            A+ +    +  G            R+   ++++T+        NL       +  PL  
Sbjct: 118 RAWMIDAYYVATGHYAVKEYDEERGRYLLKKSVDTSKDQTYVLYNLTQTQLEHILFPLGK 177

Query: 175 LKKYETWKLAQDIGGQDLVN 194
            KK E  +LA+++G      
Sbjct: 178 YKKDEVRELAKNLGLPVASK 197


>gi|167039428|ref|YP_001662413.1| tRNA-specific 2-thiouridylase MnmA [Thermoanaerobacter sp. X514]
 gi|300915481|ref|ZP_07132794.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacter sp. X561]
 gi|307725247|ref|YP_003904998.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacter sp. X513]
 gi|166853668|gb|ABY92077.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacter sp. X514]
 gi|300888541|gb|EFK83690.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacter sp. X561]
 gi|307582308|gb|ADN55707.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacter sp. X513]
          Length = 376

 Score = 61.5 bits (147), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 61/200 (30%), Gaps = 13/200 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL---CVRKKIV 61
           +KK    ++  SGG DSS       ++   V  ++    Q    E        C    + 
Sbjct: 13  MKKNNRVVVGMSGGVDSSVSAYLLKEQGFDVIGVTMQIWQDKDEEAVRVEGGCCSLSAVN 72

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +          + +++    +          +  ++ +  N     +     I       
Sbjct: 73  DARRVANKIGIKYYVMNFKDVFKEKVIDYFVDEYLRGRTPNPC---IACNKYIKFEELLK 129

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA-------INLGMESHVTVHTPLMW 174
            A+ +    +  G            R+   ++++T+        NL       +  PL  
Sbjct: 130 RAWMIDAYYVATGHYAVKEYDEERGRYLLKKSVDTSKDQTYVLYNLTQTQLEHILFPLGK 189

Query: 175 LKKYETWKLAQDIGGQDLVN 194
            KK E  +LA+++G      
Sbjct: 190 YKKDEVRELAKNLGLPVASK 209


>gi|240140914|ref|YP_002965394.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylobacterium extorquens AM1]
 gi|254563424|ref|YP_003070519.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylobacterium extorquens DM4]
 gi|240010891|gb|ACS42117.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylobacterium extorquens AM1]
 gi|254270702|emb|CAX26706.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylobacterium extorquens DM4]
          Length = 410

 Score = 61.5 bits (147), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 53/199 (26%), Gaps = 14/199 (7%)

Query: 1   MN--DIIKKA--PSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLC 55
           MN  D+ K       ++  SGG DSS            V  ++   Y        +   C
Sbjct: 26  MNSLDLPKPPHETRVVVAMSGGVDSSVVAGLLKREGYDVVGVTLQLYDHGAATHRKGACC 85

Query: 56  VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
             + I +     +      ++L           S+    A        P   V     + 
Sbjct: 86  AGRDIHDARAVAETLGIPHYVLDYED---RFRESVIDRFAESYLSGETPIPCVECNRSVK 142

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDT------IRAIETAINLGMESHVTVH 169
                 LA  LG   +  G      +     R                     E    + 
Sbjct: 143 FRDLLGLARELGAEALATGHYVASRARPEGGRALYRALDPARDQSYFLYATTPEQLAYLR 202

Query: 170 TPLMWLKKYETWKLAQDIG 188
            PL    K ET  LA+++G
Sbjct: 203 FPLGERPKDETRALARELG 221


>gi|182625650|ref|ZP_02953419.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium perfringens D str. JGS1721]
 gi|177909052|gb|EDT71527.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium perfringens D str. JGS1721]
          Length = 359

 Score = 61.5 bits (147), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 58/210 (27%), Gaps = 12/210 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVELMP 65
               ++  SGG DSS       ++   V  ++    Q +K   E     C    + +   
Sbjct: 3   KKKVVIGMSGGVDSSVAAYLLKEQGYDVIGVTMQIWQEDKEYEEREGGCCSLSAVDDARR 62

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +      ++L        +      +  ++ +  N     +     +        A  
Sbjct: 63  VAQKLDIPFYVLNFRDSFKRNVIDYFVDEYIQGRTPNPC---IACNKYLKFDELLQKAKG 119

Query: 126 LGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           +G   +  G            +      D         NL  E       P     K + 
Sbjct: 120 IGADYVATGHYAKIEERDGRFQLIRSKDDRKDQTYALYNLTQEQLEHTLMPCGEFTKDKI 179

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDK 210
            ++A++IG         EE   C++   + 
Sbjct: 180 REIAKEIGLDVHNKKDSEEI--CFIPDNNH 207


>gi|168218238|ref|ZP_02643863.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium perfringens NCTC 8239]
 gi|182379744|gb|EDT77223.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium perfringens NCTC 8239]
          Length = 359

 Score = 61.5 bits (147), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 58/210 (27%), Gaps = 12/210 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVELMP 65
               ++  SGG DSS       ++   V  ++    Q +K   E     C    + +   
Sbjct: 3   KKKVVIGMSGGVDSSVAAYLLKEQGYDVIGVTMQIWQEDKEYEEREGGCCSLSAVDDARR 62

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +      ++L        +      +  ++ +  N     +     +        A  
Sbjct: 63  VAQKLDIPFYVLNFRDSFKRNVIDYFVDEYIQGRTPNPC---IACNKYLKFDELLQKAKG 119

Query: 126 LGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           +G   +  G            +      D         NL  E       P     K + 
Sbjct: 120 IGADYVATGHYAKIEERDGRFQLIRSKDDRKDQTYALYNLTQEQLEHTLMPCGEFTKDKI 179

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDK 210
            ++A++IG         EE   C++   + 
Sbjct: 180 REIAKEIGLDVHNKKDSEEI--CFIPDNNH 207


>gi|110801338|ref|YP_696468.1| tRNA-specific 2-thiouridylase MnmA [Clostridium perfringens ATCC
           13124]
 gi|168211408|ref|ZP_02637033.1| tRNA -methyltransferase [Clostridium perfringens B str. ATCC 3626]
 gi|24638315|sp|Q8XJH3|MNMA_CLOPE RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|123049729|sp|Q0TPH2|MNMA_CLOP1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|110675985|gb|ABG84972.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium perfringens ATCC 13124]
 gi|170710614|gb|EDT22796.1| tRNA -methyltransferase [Clostridium perfringens B str. ATCC 3626]
          Length = 359

 Score = 61.5 bits (147), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 58/210 (27%), Gaps = 12/210 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVELMP 65
               ++  SGG DSS       ++   V  ++    Q +K   E     C    + +   
Sbjct: 3   KKKVVIGMSGGVDSSVAAYLLKEQGYDVIGVTMQIWQEDKEYEEREGGCCSLSAVDDARR 62

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +      ++L        +      +  ++ +  N     +     +        A  
Sbjct: 63  VAQKLDIPFYVLNFRDSFKRNVIDYFVDEYIQGRTPNPC---IACNKYLKFDELLQKAKG 119

Query: 126 LGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           +G   +  G            +      D         NL  E       P     K + 
Sbjct: 120 IGADYVATGHYAKIEERDGRFQLIRSKDDRKDQTYALYNLTQEQLEHTLMPCGEFTKDKI 179

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDK 210
            ++A++IG         EE   C++   + 
Sbjct: 180 REIAKEIGLDVHNKKDSEEI--CFIPDNNH 207


>gi|168214260|ref|ZP_02639885.1| tRNA -methyltransferase [Clostridium perfringens CPE str. F4969]
 gi|170714272|gb|EDT26454.1| tRNA -methyltransferase [Clostridium perfringens CPE str. F4969]
          Length = 359

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 58/210 (27%), Gaps = 12/210 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVELMP 65
               ++  SGG DSS       ++   V  ++    Q +K   E     C    + +   
Sbjct: 3   KKKVVIGMSGGVDSSVAAYLLKEQGYDVIGVTMQIWQEDKEYEEREGGCCSLSAVDDARR 62

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +      ++L        +      +  ++ +  N     +     +        A  
Sbjct: 63  VAQKLDIPFYVLNFRDSFKRNVIDYFVDEYIQGRTPNPC---IACNKYLKFDELLQKAKG 119

Query: 126 LGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           +G   +  G            +      D         NL  E       P     K + 
Sbjct: 120 IGADYVATGHYAKIEERDGRFQLIRSKDDRKDQTYALYNLTQEQLEHTLMPCGEFTKDKI 179

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDK 210
            ++A++IG         EE   C++   + 
Sbjct: 180 REIAKEIGLDVHNKKDSEEI--CFIPDNNH 207


>gi|119468496|ref|ZP_01611587.1| thiamine biosynthesis protein ThiI [Alteromonadales bacterium TW-7]
 gi|119448004|gb|EAW29269.1| thiamine biosynthesis protein ThiI [Alteromonadales bacterium TW-7]
          Length = 485

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 55/187 (29%), Gaps = 25/187 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      L L SGG DS       + +  R   L F+ G            +  K     
Sbjct: 177 LPTQEDVLSLMSGGFDSGVASYQMIRKGARTHFLFFNLGG-------AAHEIGVKQASYF 229

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             WK       +           +   + V  +I +N   +        + +   + +A 
Sbjct: 230 -LWKKYSSTHKV--------KFITVDFEPVVAEILENVENSQMGVVLKRMMMRAGSAVAE 280

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           +L I  +V G      S         I  +   +         +  PL+   K E   +A
Sbjct: 281 KLNIQALVTGESIGQVSSQTLANLSVIDRVTETL---------ILRPLIQHDKQEIINIA 331

Query: 185 QDIGGQD 191
           + IG  +
Sbjct: 332 RQIGTAE 338


>gi|328542757|ref|YP_004302866.1| tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase,
           contains the PP-loop ATPase domain [polymorphum gilvum
           SL003B-26A1]
 gi|326412503|gb|ADZ69566.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase, contains the PP-loop ATPase domain
           [Polymorphum gilvum SL003B-26A1]
          Length = 393

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 44/185 (23%), Gaps = 9/185 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS            V  ++   Y     V+     C  + I +     +
Sbjct: 15  RVVVAMSGGVDSSVVAGLMKQEGYDVVGVTLQLYDHGAAVQRAGACCAGQDIHDARRVAE 74

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++    A        P   V     +        A  LG 
Sbjct: 75  RLGIPHYVLD---YERRFKEAVIDRFAESYMAGETPIPCVACNQTVKFSDLLETARTLGA 131

Query: 129 TNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +     V      +                       E    +  PL    K E   L
Sbjct: 132 DVLATGHYVRSAPAGNRRALYRPADLDRDQSYFLFATTQEQLDFLRFPLGGRPKAEVRAL 191

Query: 184 AQDIG 188
           A+  G
Sbjct: 192 ARRFG 196


>gi|193216506|ref|YP_001999748.1| thiamine biosynthesis protein ThiI [Mycoplasma arthritidis 158L3-1]
 gi|238692471|sp|B3PLZ2|THII_MYCA5 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|193001829|gb|ACF07044.1| thiamine biosynthesis protein [Mycoplasma arthritidis 158L3-1]
          Length = 381

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 53/187 (28%), Gaps = 25/187 (13%)

Query: 14  LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
           L SGG DS         R  R+  L+F                 +K+ EL+       G 
Sbjct: 173 LMSGGIDSPVAAYLLQKRGLRINFLNF------ITPPHTDEKTTQKVDELIKVIAKYQGS 226

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
             +  +                + +  N      +  R+   +         +       
Sbjct: 227 AKLYQVNF--------TDIMNYIGLVSNQKYKIILMRRSFYRIAQMLAKKLHIKA----- 273

Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
                  S   +      + +E    +     + +  PL+   K ET K+A+ IG   + 
Sbjct: 274 ------LSNGENLAQVASQTLEAIHTVSAPITLPIFRPLLSFDKNETIKIAEKIGTMPIS 327

Query: 194 NLILEES 200
            L   E+
Sbjct: 328 ILKACET 334


>gi|110802009|ref|YP_699068.1| tRNA-specific 2-thiouridylase MnmA [Clostridium perfringens SM101]
 gi|123047295|sp|Q0SS39|MNMA_CLOPS RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|110682510|gb|ABG85880.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium perfringens SM101]
          Length = 359

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 58/210 (27%), Gaps = 12/210 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVELMP 65
               ++  SGG DSS       ++   V  ++    Q +K   E     C    + +   
Sbjct: 3   KKKVVIGMSGGVDSSVAAYLLKEQGYDVIGVTMQIWQEDKEYEEREGGCCSLSAVDDARR 62

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +      ++L        +      +  ++ +  N     +     +        A  
Sbjct: 63  VAQKLDIPFYVLNFRDSFKRNVIDYFVDEYIQGRTPNPC---IACNKYLKFDELLQKAKG 119

Query: 126 LGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           +G   +  G            +      D         NL  E       P     K + 
Sbjct: 120 IGADYVATGHYAKIEERDGRFQLIRSKDDRKDQTYALYNLTQEQLEHTLMPCGEFTKDKI 179

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDK 210
            ++A++IG         EE   C++   + 
Sbjct: 180 REIAKEIGLDVHNKKDSEEI--CFIPDNNH 207


>gi|239832470|ref|ZP_04680799.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ochrobactrum intermedium LMG 3301]
 gi|239824737|gb|EEQ96305.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ochrobactrum intermedium LMG 3301]
          Length = 411

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 47/185 (25%), Gaps = 9/185 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS            V  ++   Y     V      C  + I +     +
Sbjct: 29  RVVVAMSGGVDSSVVAGILKREGYDVVGVTLQLYDHGAAVHRAGSCCAGQDIEDARRVSE 88

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++    A        P   V     +        A  LG 
Sbjct: 89  SLGIPHYVLD---YEARFREAVIDPFANSYVSGETPIPCVSCNQTVKFADLLQTARDLGA 145

Query: 129 TNI---VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYETWKL 183
             +          + +     R       ++            +       L K +  ++
Sbjct: 146 DALATGHYIRSRANGAHRALYRPVDTDRDQSYFLFATTQEQIDYLRFPLGHLPKAQVREI 205

Query: 184 AQDIG 188
           A+++G
Sbjct: 206 AEEMG 210


>gi|153008906|ref|YP_001370121.1| tRNA-specific 2-thiouridylase MnmA [Ochrobactrum anthropi ATCC
           49188]
 gi|166235072|sp|A6WZ88|MNMA_OCHA4 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|151560794|gb|ABS14292.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ochrobactrum anthropi ATCC 49188]
          Length = 398

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 47/185 (25%), Gaps = 9/185 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS            V  ++   Y     V      C  + I +     +
Sbjct: 16  RVVVAMSGGVDSSVVAGILKREGYDVVGVTLQLYDHGAAVHRAGSCCAGQDIEDARRVSE 75

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++    A        P   V     +        A  LG 
Sbjct: 76  SLGIPHYVLD---YEARFREAVIDPFANSYVSGETPIPCVSCNQTVKFADLLQTARDLGA 132

Query: 129 TNI---VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYETWKL 183
             +          + +     R       ++            +       L K +  ++
Sbjct: 133 DALATGHYIRSRANGAHRALYRPVDTDRDQSYFLFATTQEQIDYLRFPLGHLPKAQVREI 192

Query: 184 AQDIG 188
           A+++G
Sbjct: 193 AEEMG 197


>gi|319405239|emb|CBI78844.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bartonella sp. AR 15-3]
          Length = 409

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 47/188 (25%), Gaps = 9/188 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
           +    ++  SGG DSS            V  ++   Y            C  + I +   
Sbjct: 13  ENSRIVVAMSGGVDSSVVAGLLKKEGYDVVGITLQLYDHGAATHRVGACCAGQDIEDARR 72

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +      +IL      +    ++    A        P   V     +      T AY 
Sbjct: 73  VAETLGVPHYILD---YEERFREAVINPFAESYAHGETPIPCVACNQTVKFADLLTTAYE 129

Query: 126 LGITNI---VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYET 180
           LG   +            +     R       ++            +       L K   
Sbjct: 130 LGADALATGHYIRSRLHGAHRALFRSLDADRDQSYFLFATTQEQIDYLRFPLGDLSKEHV 189

Query: 181 WKLAQDIG 188
            ++A ++G
Sbjct: 190 REIAAEMG 197


>gi|253564120|ref|ZP_04841577.1| argininosuccinate synthase [Bacteroides sp. 3_2_5]
 gi|251947896|gb|EES88178.1| argininosuccinate synthase [Bacteroides sp. 3_2_5]
 gi|301161583|emb|CBW21123.1| putative argininosuccinate synthase [Bacteroides fragilis 638R]
          Length = 401

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 45/134 (33%), Gaps = 12/134 (8%)

Query: 5   IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +++    ++ FSGG D S T +  A ++   V     + G  ++ +L+       K+  +
Sbjct: 1   MEQKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSEEQLKQNEENAYKLGAV 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                        + L +  +    SL   +   +  N      V    I   +  A  A
Sbjct: 61  -----------KYVTLDVTQEYYEKSLKYMIFGNVLRNGTYPISVSSERIFQALAIARYA 109

Query: 124 YRLGITNIVIGVCE 137
             +G   I  G   
Sbjct: 110 KEIGAEAIAHGSTG 123


>gi|60680054|ref|YP_210198.1| putative argininosuccinate synthase [Bacteroides fragilis NCTC
           9343]
 gi|60491488|emb|CAH06240.1| putative argininosuccinate synthase [Bacteroides fragilis NCTC
           9343]
          Length = 401

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 45/134 (33%), Gaps = 12/134 (8%)

Query: 5   IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +++    ++ FSGG D S T +  A ++   V     + G  ++ +L+       K+  +
Sbjct: 1   MEQKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSEEQLKQNEENAYKLGAV 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                        + L +  +    SL   +   +  N      V    I   +  A  A
Sbjct: 61  -----------KYVTLDVTQEYYEKSLKYMIFGNVLRNGTYPISVSSERIFQALAIARYA 109

Query: 124 YRLGITNIVIGVCE 137
             +G   I  G   
Sbjct: 110 KEIGAEAIAHGSTG 123


>gi|53711824|ref|YP_097816.1| argininosuccinate synthase [Bacteroides fragilis YCH46]
 gi|255009885|ref|ZP_05282011.1| argininosuccinate synthase [Bacteroides fragilis 3_1_12]
 gi|265765192|ref|ZP_06093467.1| argininosuccinate synthase [Bacteroides sp. 2_1_16]
 gi|313147673|ref|ZP_07809866.1| argininosuccinate synthase [Bacteroides fragilis 3_1_12]
 gi|52214689|dbj|BAD47282.1| argininosuccinate synthase [Bacteroides fragilis YCH46]
 gi|263254576|gb|EEZ26010.1| argininosuccinate synthase [Bacteroides sp. 2_1_16]
 gi|313136440|gb|EFR53800.1| argininosuccinate synthase [Bacteroides fragilis 3_1_12]
          Length = 401

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 45/134 (33%), Gaps = 12/134 (8%)

Query: 5   IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +++    ++ FSGG D S T +  A ++   V     + G  ++ +L+       K+  +
Sbjct: 1   MEQKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSEEQLKQNEENAYKLGAV 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                        + L +  +    SL   +   +  N      V    I   +  A  A
Sbjct: 61  -----------KYVTLDVTQEYYEKSLKYMIFGNVLRNGTYPISVSSERIFQALAIARYA 109

Query: 124 YRLGITNIVIGVCE 137
             +G   I  G   
Sbjct: 110 KEIGAEAIAHGSTG 123


>gi|307129908|ref|YP_003881924.1| sulfur transfer protein [Dickeya dadantii 3937]
 gi|306527437|gb|ADM97367.1| sulfur transfer protein [Dickeya dadantii 3937]
          Length = 482

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 57/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAI-------DFEPVVGEILEKVDDGQMGVVLKRMMVRAASRIAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K    ++A+++G +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIIRMARELGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|218532352|ref|YP_002423168.1| tRNA-specific 2-thiouridylase MnmA [Methylobacterium
           chloromethanicum CM4]
 gi|218524655|gb|ACK85240.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylobacterium chloromethanicum CM4]
          Length = 410

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 53/199 (26%), Gaps = 14/199 (7%)

Query: 1   MN--DIIKKA--PSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLC 55
           MN  D+ K       ++  SGG DSS            V  ++   Y        +   C
Sbjct: 26  MNSLDLPKPPHETRVVVAMSGGVDSSVVAGLLKREGYDVVGVTLQLYDHGAATHRKGACC 85

Query: 56  VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
             + I +     +      ++L           S+    A        P   V     + 
Sbjct: 86  AGRDIHDARAVAETLGIPHYVLDYED---RFRESVIDRFADSYLSGETPIPCVECNRSVK 142

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDT------IRAIETAINLGMESHVTVH 169
                 LA  LG   +  G      +     R                     E    + 
Sbjct: 143 FRDLLGLARELGAEALATGHYVASRARPEGGRALYRALDPARDQSYFLYATTPEQLAYLR 202

Query: 170 TPLMWLKKYETWKLAQDIG 188
            PL    K ET  LA+++G
Sbjct: 203 FPLGERPKDETRALARELG 221


>gi|308189959|ref|YP_003922890.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycoplasma fermentans JER]
 gi|319777241|ref|YP_004136892.1| tRNA-specific 2-thiouridylase mnma [Mycoplasma fermentans M64]
 gi|307624701|gb|ADN69006.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycoplasma fermentans JER]
 gi|318038316|gb|ADV34515.1| tRNA-specific 2-thiouridylase MnmA [Mycoplasma fermentans M64]
          Length = 372

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 51/191 (26%), Gaps = 12/191 (6%)

Query: 7   KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-----KVELECRLCVR--- 57
                ++L  SGG DSS      L +   VE L                      +    
Sbjct: 1   MHKKKVILGMSGGVDSSVAAYLLLQQGYDVEGLFMRNWDSYVNNDFLGNENISQDICPQE 60

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           +   + +        + H +    + +   +     +    +        +  + I F  
Sbjct: 61  QDYQDALAVANKLGIKLHRVD--FVKEYWDNVFENFIEEYKKGRTPNPDILCNKYIKFDA 118

Query: 118 FAATLAYRLGITNIVIGVCETDYSGY-PDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
           F      +L    I +G      +G     +            L  +    V  PL    
Sbjct: 119 FLKYAFEKLNADYIAMGHYAKVKNGKLYRAKDQNKDQTYFLAQLTNQQLEKVLMPLADYP 178

Query: 177 KYETWKLAQDI 187
           K E  K+A+ +
Sbjct: 179 KEEIRKIAKKL 189


>gi|163868748|ref|YP_001609965.1| tRNA-specific 2-thiouridylase MnmA [Bartonella tribocorum CIP
           105476]
 gi|205812594|sp|A9IWH0|MNMA_BART1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|161018412|emb|CAK01970.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bartonella tribocorum CIP 105476]
          Length = 407

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/185 (11%), Positives = 44/185 (23%), Gaps = 9/185 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS            V  ++   Y            C  + I +     +
Sbjct: 16  RIVVAMSGGVDSSVVAGLLKREGYNVIGITLQLYDHGAATHRVGACCAGQDIEDARRVAE 75

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++    A        P   +     +        A  LG 
Sbjct: 76  MLGIPHYVLD---YEKRFREAVIDPFAESYAHGETPVPCIACNQTVKFADLLATARELGA 132

Query: 129 TNI---VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYETWKL 183
             +         +  +     R       ++            +       L K    ++
Sbjct: 133 DALATGHYIRSRSHGAHRALFRPLDNDRDQSYFLFATTQEQIDYLRFPLGDLPKARVREI 192

Query: 184 AQDIG 188
           A ++G
Sbjct: 193 AAEMG 197


>gi|148377683|ref|YP_001256559.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycoplasma agalactiae PG2]
 gi|205816906|sp|A5IYK6|MNMA_MYCAP RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|148291729|emb|CAL59115.1| TRNA(5 methylaminomethyl 2 thiouridylate) methyltransferase
           [Mycoplasma agalactiae PG2]
          Length = 374

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 56/194 (28%), Gaps = 16/194 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-----QRNKVELECRLCVR-- 57
           +      +L  SGG DSS C    L +   VE L                      +   
Sbjct: 1   MSNKKKVILGMSGGVDSSVCAYLLLKQGYEVEGLFMRNWDSMLNNDFLGNENISQDICPQ 60

Query: 58  -KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
            +   + +        + H +    + +  +      ++            +  + I F 
Sbjct: 61  EQDYQDALEVANKLGIKLHRVD--FVNEYWNDVFKTFISEYEAGRTPNPDILCNKYIKFK 118

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL- 175
            F+      LG   I +G       G      D  +  +    L   SH  +   LM L 
Sbjct: 119 AFSDYAFNNLGADYIAMGHYAKVTDGRLYRAKDQNK--DQTYFLAQLSHEQLKRVLMPLA 176

Query: 176 ---KKYETWKLAQD 186
               K E  K+AQ+
Sbjct: 177 EFSSKEEVRKIAQE 190


>gi|75674462|ref|YP_316883.1| hypothetical protein Nwi_0264 [Nitrobacter winogradskyi Nb-255]
 gi|74419332|gb|ABA03531.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
          Length = 452

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/227 (11%), Positives = 52/227 (22%), Gaps = 33/227 (14%)

Query: 11  ALLLFSGGQDS-STCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A++ +S G DS +     A    +R+  +    G +                        
Sbjct: 144 AVIAYSDGMDSRAVAGLMAESLGERL--VRVRVGPKAGGRPFKGQR-------------- 187

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                              + T   + + +             +             G  
Sbjct: 188 ---------EPFAAVPYSVAATGETSGRSRGFKFALISGIAAYLAEADVILVPESGQGAF 238

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                V                  +E  +N      V    P +W  K ET +    + G
Sbjct: 239 G-PALVTVAHAYPDYRNHPLFTSRMERFLNALFRRPVRFVFPRLWHTKAETLREYAALPG 297

Query: 190 QDLVNLILEESHTCY-LGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
                   +++ +C+   +          C  C AC LR+       
Sbjct: 298 SK-----WDDTKSCWRNARWSALNGNLVQCGICAACMLRRMSIHTAG 339


>gi|227327514|ref|ZP_03831538.1| thiamine biosynthesis protein ThiI [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 482

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVKQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +           V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFIAI-------DFDPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K    K A+++G +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIIKQARELGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|170743223|ref|YP_001771878.1| tRNA-specific 2-thiouridylase MnmA [Methylobacterium sp. 4-46]
 gi|205816883|sp|B0UIW7|MNMA_METS4 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|168197497|gb|ACA19444.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylobacterium sp. 4-46]
          Length = 382

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 54/199 (27%), Gaps = 14/199 (7%)

Query: 1   MN--DIIKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLC 55
           MN  D+ K       ++  SGG DSS        +   V  ++   Y            C
Sbjct: 1   MNSLDLPKAPQDTRVVVAMSGGVDSSVVAGLLRRQGYDVVGITLQLYDHGAATHRRGACC 60

Query: 56  VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
             + I +     +      ++L           ++    A        P   V     I 
Sbjct: 61  AGQDIHDARRAAETLGIPHYVLDYED---RFREAVIDRFAESYIHGETPIPCVECNRSIK 117

Query: 116 LVFAATLAYRLGITNI----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVH 169
                  A  LG   +     +        G    R       ++             + 
Sbjct: 118 FRDLLATALDLGADALATGHYVASRARPGGGRALYRALDPARDQSYFLYATTPEQLDVLR 177

Query: 170 TPLMWLKKYETWKLAQDIG 188
            PL  L K ET +LA++ G
Sbjct: 178 FPLGELPKDETRRLAREFG 196


>gi|167623646|ref|YP_001673940.1| tRNA-specific 2-thiouridylase MnmA [Shewanella halifaxensis
           HAW-EB4]
 gi|189040508|sp|B0TQ02|MNMA_SHEHH RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|167353668|gb|ABZ76281.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shewanella halifaxensis HAW-EB4]
          Length = 371

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 53/185 (28%), Gaps = 9/185 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS      + +  +VE L     + +  +  C       + +      
Sbjct: 11  KKVIVGMSGGVDSSVSAYLLMKQGYQVEGLFMKNWEEDDTDEYCA--AADDLKDAQAVCD 68

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + H +      +   +     +A            +  + I F  F       L  
Sbjct: 69  KLGIKLHTVN--FASEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFADEILDA 126

Query: 129 TNIVIGVCETDYSGYPDCRH-----DTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             I +G            +                 LG E       P+  L+K E  ++
Sbjct: 127 DYIAMGHYVRRRDIDGTSQMLRGIDGNKDQSYFLYTLGHEQVARSLFPVGELEKSEVREI 186

Query: 184 AQDIG 188
           A+++G
Sbjct: 187 AKEMG 191


>gi|110634566|ref|YP_674774.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mesorhizobium sp. BNC1]
 gi|123353475|sp|Q11G66|MNMA_MESSB RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|110285550|gb|ABG63609.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chelativorans sp. BNC1]
          Length = 391

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/185 (11%), Positives = 47/185 (25%), Gaps = 9/185 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS            V  ++   Y     V      C  + I +     +
Sbjct: 14  RVVVAMSGGVDSSVVAGLLAREGYEVVGVTLQLYDHGAAVHRAGSCCAGQDIDDARRVAE 73

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L      +    ++    A        P   V     +        A  LG 
Sbjct: 74  TLGIAHYVLD---YEERFRKAVIDPFAESYVTGETPIPCVACNQTVKFSDLLETARELGA 130

Query: 129 TNI---VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYETWKL 183
             +          + +     R       ++            +       + K +   +
Sbjct: 131 DALATGHYIRSRANGAHRALYRPVDADRDQSYFLFATTQEQIDYLRFPLGGMSKPQVRAI 190

Query: 184 AQDIG 188
           A+++G
Sbjct: 191 AEEMG 195


>gi|294155479|ref|YP_003559863.1| thiamine biosynthesis/tRNA modification protein ThiI [Mycoplasma
           crocodyli MP145]
 gi|291599944|gb|ADE19440.1| thiamine biosynthesis/tRNA modification protein ThiI [Mycoplasma
           crocodyli MP145]
          Length = 383

 Score = 61.5 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 58/193 (30%), Gaps = 25/193 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   L L SGG DS       + R  +V+ LSF          +       KI  L    
Sbjct: 164 SGKILHLMSGGIDSPVAAFLLMKRGLKVDFLSF------ITPPQTDEKTVDKITRLASTV 217

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                       + L   ++S L   +++    +            I             
Sbjct: 218 NQYQIT------SNLNFANYSKLMNYLSLTSNQSFKITLMRRSFYRI------------- 258

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                +       S   +      + +E+   +G   ++ +  PL+   K ET ++A+ I
Sbjct: 259 AKEFALKHDYIALSNGDNLGQVASQTLESMTTIGDAINMQILRPLLTYDKDETIQIAKKI 318

Query: 188 GGQDLVNLILEES 200
              D+      E+
Sbjct: 319 KTYDISIEKANET 331


>gi|253687428|ref|YP_003016618.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|259518568|sp|C6DB40|THII_PECCP RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|251754006|gb|ACT12082.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 482

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVKQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +           V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFIAI-------DFDPVVGEILEKVDDGQMGVVLKRMMVRAASKIAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K    K A+++G +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIIKQARELGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|291616532|ref|YP_003519274.1| ThiI [Pantoea ananatis LMG 20103]
 gi|291151562|gb|ADD76146.1| ThiI [Pantoea ananatis LMG 20103]
 gi|327392963|dbj|BAK10385.1| thiamine biosynthesis protein ThiI [Pantoea ananatis AJ13355]
          Length = 482

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 57/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYIWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGRSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASMVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K    K+A++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIIKVAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|227113451|ref|ZP_03827107.1| thiamine biosynthesis protein ThiI [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 482

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVKQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +           V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFIAI-------DFDPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K    K A+++G +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIIKQARELGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|221069865|ref|ZP_03545970.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Comamonas testosteroni KF-1]
 gi|220714888|gb|EED70256.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Comamonas testosteroni KF-1]
          Length = 376

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 54/194 (27%), Gaps = 12/194 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      ++  SGG DS+        +   V  +     + +     C   +     + +
Sbjct: 1   MSNKQRVVVGLSGGVDSAVTAYLLKQQGHEVVGIFMKNWEDDDDSEYCSSNI-----DFV 55

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                +      +            +      + Q    PN  V     I        A 
Sbjct: 56  DAAAVADVIGIEIEHVNFAADYKDRVFAEFLREYQAGRTPNPDVLCNAEIKFKAFLDHAM 115

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV-------HTPLMWLKK 177
           RLG   I  G              + ++ ++ + +     H            P+  L K
Sbjct: 116 RLGAEKIATGHYARVRQNPSTQLFELLKGLDNSKDQSYFLHRLNQAQLSKAMFPVGELHK 175

Query: 178 YETWKLAQDIGGQD 191
            E  ++A++IG  +
Sbjct: 176 TEVRRIAEEIGLPN 189


>gi|261822521|ref|YP_003260627.1| thiamine biosynthesis protein ThiI [Pectobacterium wasabiae WPP163]
 gi|261606534|gb|ACX89020.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Pectobacterium wasabiae WPP163]
          Length = 482

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVKQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +           V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFIAI-------DFDPVVGEILEKVDDGQMGVVLKRMMVRAASKIAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K    K A+++G +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIIKQARELGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|168207849|ref|ZP_02633854.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium perfringens E str. JGS1987]
 gi|169343749|ref|ZP_02864748.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium perfringens C str. JGS1495]
 gi|169298309|gb|EDS80399.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium perfringens C str. JGS1495]
 gi|170660837|gb|EDT13520.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium perfringens E str. JGS1987]
          Length = 359

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 58/210 (27%), Gaps = 12/210 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVELMP 65
               ++  SGG DSS       ++   V  ++    Q +K   E     C    + +   
Sbjct: 3   KKKVVIGMSGGVDSSVAAYLLKEQGYDVIGVTMQIWQEDKEYEEREGGCCSLSAVDDARR 62

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +      ++L        +      +  ++ +  N     +     +        A  
Sbjct: 63  VAQKLDIPFYVLNFRDSFKRNVIDYFVDEYIQGRTPNPC---IACNKYLKFDELLQKAKG 119

Query: 126 LGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           +G   +  G            +      D         NL  E       P     K + 
Sbjct: 120 IGADYVATGHYAKIEERDGRFQLIRSKDDRKDQTYALYNLTQEQLEHTLMPCGEFTKDKI 179

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDK 210
            ++A++IG         EE   C++   + 
Sbjct: 180 REIAKEIGLDVHNKKDSEEI--CFIPDNNH 207


>gi|302531818|ref|ZP_07284160.1| ExsB family protein [Streptomyces sp. AA4]
 gi|302440713|gb|EFL12529.1| ExsB family protein [Streptomyces sp. AA4]
          Length = 237

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 54/216 (25%), Gaps = 44/216 (20%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +LLFS G DS      A         L FD G R   +             +      + 
Sbjct: 9   VLLFSAGLDS----YPAWHYLGCPPGLYFDLGHRYASQERA---------AIAALADAAG 55

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
            E  I     LG                           RN+   + AA  A  +    +
Sbjct: 56  IEVEISEELRLGAWEAEDAIIP----------------LRNVHLAMLAANRAEVVWCIGV 99

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
                        D   +    +   I    E  V V +P   + K E        G   
Sbjct: 100 -------KGDHTLDKSREAFADMGRFIARFSEQPVRVDSPFWNMTKTEIIAWYLAQGLPV 152

Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLR 227
              L    + +C      +       C  CP+C  R
Sbjct: 153 DHLL---LTFSC-----SRTDGSTTHCGRCPSCLRR 180


>gi|167042070|gb|ABZ06805.1| putative tRNA methyl transferase [uncultured marine microorganism
           HF4000_141I21]
          Length = 382

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 52/190 (27%), Gaps = 9/190 (4%)

Query: 5   IKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +K+      ++  SGG DSST           V  ++       K   E R C   + + 
Sbjct: 14  LKRPKDTKVVVAMSGGVDSSTVAGLMKKDGYDVIGITLKLYDDAKSSKESRQCCAGQDIL 73

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
              +    L  DH +            +  +          P   V     +      + 
Sbjct: 74  DAKRVSQQLNIDHKI--LYYQKKFKKDVIDSFIDSYVAGETPIPCVQCNQTVKFRDLYSY 131

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDT-----IRAIETAINLGMESHVTVHTPLMWLKK 177
           A  +    ++ G          +                  +   E    +  PL  ++K
Sbjct: 132 ALEMKADALITGHYVNRIKKNGNAEMYRAIDLTRDQSYFLFSTTQEQLNFLRFPLGQMQK 191

Query: 178 YETWKLAQDI 187
            ET K+A  +
Sbjct: 192 KETRKIASKL 201


>gi|183220730|ref|YP_001838726.1| tRNA-specific 2-thiouridylase MnmA [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|189910831|ref|YP_001962386.1| tRNA-specific 2-thiouridylase MnmA [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Ames)']
 gi|205816873|sp|B0SPC6|MNMA_LEPBP RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205816879|sp|B0SG84|MNMA_LEPBA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|167775507|gb|ABZ93808.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Ames)']
 gi|167779152|gb|ABZ97450.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 380

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 60/194 (30%), Gaps = 11/194 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL---SFDYGQRNKVELECRLCVRKKIV 61
           +K+    ++  SGG DS+      ++    V  +   +++Y        +   C  + I 
Sbjct: 1   MKEKEKIIVAMSGGVDSAVAAGLLMEAGYDVIGVNLRTWEYEAPACDTTKKSCCSPEDIR 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +            +++    +  +    +        +D   PN  V     +       
Sbjct: 61  DARDVGLSLNIPFYVIK---MEKVFGERVIDRFISDYKDGRTPNPCVECNTFVKFGALFE 117

Query: 122 LAYRLGITNIVIGVCET--DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW---LK 176
            A +LGI  I  G      +  G    R+           L   S   +   +     + 
Sbjct: 118 QAKKLGIDKIATGHYARVIEVDGRYAIRNAVDMKKNQTYYLYGLSQDNIKNTVFPLGEMD 177

Query: 177 KYETWKLAQDIGGQ 190
           K E  ++A+ +G  
Sbjct: 178 KSEVREIAKRMGLP 191


>gi|332993407|gb|AEF03462.1| tRNA-specific 2-thiouridylase MnmA [Alteromonas sp. SN2]
          Length = 369

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 41/142 (28%), Gaps = 5/142 (3%)

Query: 1   MNDIIKK-APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           M DI    +   ++  SGG DSS      L +  +VE L     + +  +  C     + 
Sbjct: 1   MTDIESNASKKVIVGMSGGVDSSVSAYLLLQQGYQVEGLFMKNWEEDDNDEYC--LAAED 58

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           + +          E H +      +   +     +             +  + I F  F 
Sbjct: 59  LKDAQAVADKLGIELHTIN--FAAEYWDNVFEYFLEEYKAGRTPNPDIMCNKEIKFKAFL 116

Query: 120 ATLAYRLGITNIVIGVCETDYS 141
              A  LG   I  G       
Sbjct: 117 EFAAEDLGADYIATGHYVRRRH 138


>gi|320540323|ref|ZP_08039975.1| sulfurtransferase required for thiamine and 4-thiouridine
           biosynthesis [Serratia symbiotica str. Tucson]
 gi|320029643|gb|EFW11670.1| sulfurtransferase required for thiamine and 4-thiouridine
           biosynthesis [Serratia symbiotica str. Tucson]
          Length = 482

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHFCFFNLGG-------AAHEIC--VKQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
               H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FASSHKVRFVAI-------DFEPVVGEILEKVDDGQMGVVLKRMMVRAASQIAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K    K+A++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIIKVAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|319781789|ref|YP_004141265.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317167677|gb|ADV11215.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 396

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 47/188 (25%), Gaps = 9/188 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
           +    ++  SGG DSS            V  ++   Y            C  + I +   
Sbjct: 11  ENTRIVVAMSGGVDSSVVAGLLKREGYDVVGVTLQLYDHGAATHRAGSCCAGQDIDDARR 70

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +      ++L      +    ++    A        P   V     +        A  
Sbjct: 71  VSETLGIPHYVLD---YEERFRKAVIDPFAESYVAGETPIPCVSCNQTVKFADLLATAKE 127

Query: 126 LGITNIVIGVCETDYSGYPD---CRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYET 180
           LG   +  G      +        R       ++            +       L K + 
Sbjct: 128 LGADALATGHYIRSGANGAQRALYRPVDADRDQSYFLFATTQAQIDYLRFPLGGLSKPQV 187

Query: 181 WKLAQDIG 188
             +A+++G
Sbjct: 188 RAIAEEMG 195


>gi|257452732|ref|ZP_05618031.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
           [Fusobacterium sp. 3_1_5R]
 gi|257466593|ref|ZP_05630904.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
           [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917748|ref|ZP_07913988.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium gonidiaformans ATCC 25563]
 gi|317059273|ref|ZP_07923758.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium sp. 3_1_5R]
 gi|313684949|gb|EFS21784.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium sp. 3_1_5R]
 gi|313691623|gb|EFS28458.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium gonidiaformans ATCC 25563]
          Length = 345

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 53/193 (27%), Gaps = 22/193 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF--DYGQRNKVELECRLCVRKKIVELM 64
                +L  SGG DS+            V  + F     +R + E++    +  +    +
Sbjct: 1   MKEKVILGMSGGVDSAVAAYLLQKNGYDVIAVHFSVHKTERTQEEVKDSQTIANQFSIPL 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             +         +    L +I             +    P+      + +        A 
Sbjct: 61  YSYCLEKEFQEKIISYYLTEI-------------EKGRTPSPCPLCDDSVKFHLLFQEAE 107

Query: 125 RLGITNIVIGVCETDYSGYPD-------CRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
           + G   +  G   +  S             H           L  E    +  PL  L+K
Sbjct: 108 KHGAKYVATGHYASISSNNVFKTSLLEANHHIHKDQCYMLYRLSSEKLKRILFPLSSLEK 167

Query: 178 YETWKLAQDIGGQ 190
            E  ++A+ IG  
Sbjct: 168 SEVREIARKIGLF 180


>gi|315125902|ref|YP_004067905.1| thiamine biosynthesis protein ThiI [Pseudoalteromonas sp. SM9913]
 gi|315014416|gb|ADT67754.1| thiamine biosynthesis protein ThiI [Pseudoalteromonas sp. SM9913]
          Length = 485

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 55/187 (29%), Gaps = 25/187 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      L L SGG DS       + +  R   L F+ G            +  K     
Sbjct: 177 LPTQDDVLSLMSGGFDSGVASYQMIRKGARTHFLFFNLGG-------AAHEIGVKQASYY 229

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             WK       +           +   + V  +I +N   +        + +   + +A 
Sbjct: 230 -LWKQYSSTHKV--------KFITVDFEPVVAEILENVENSQMGVVLKRMMMRAGSAVAE 280

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           +L I  +V G      S         I  +   +         +  PL+   K E   +A
Sbjct: 281 KLNIQALVTGESIGQVSSQTLANLSVIDRVTETL---------ILRPLIQHDKQEIINIA 331

Query: 185 QDIGGQD 191
           + IG  +
Sbjct: 332 RQIGTAE 338


>gi|157370264|ref|YP_001478253.1| tRNA-specific 2-thiouridylase MnmA [Serratia proteamaculans 568]
 gi|166991124|sp|A8GDD5|MNMA_SERP5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|157322028|gb|ABV41125.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Serratia proteamaculans 568]
          Length = 367

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 51/192 (26%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +V  L     + +  E  C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVTAYLLQQQGYQVAGLFMKNWEEDDDEEYCS--AATDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +             +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G            R                 L  E       P+  L
Sbjct: 115 FAAEDLGADFIATGHYVRRQDVDSKSRLLRGVDGNKDQSYFLYTLSHEQVAQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K E  ++A+ +
Sbjct: 175 EKPEVRRIAEQL 186


>gi|270261459|ref|ZP_06189732.1| tRNA-specific 2-thiouridylase mnmA [Serratia odorifera 4Rx13]
 gi|270044943|gb|EFA18034.1| tRNA-specific 2-thiouridylase mnmA [Serratia odorifera 4Rx13]
          Length = 367

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 51/192 (26%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +V  L     + +  E  C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVTAYLLQQQGYQVAGLFMKNWEEDDDEEYCS--AATDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +             +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G            R                 L  E       P+  L
Sbjct: 115 FAAEDLGADFIATGHYVRRQDVDGKSRLLRGVDGNKDQSYFLYTLSHEQVAQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K E  ++A+ +
Sbjct: 175 EKPEVRRIAEQL 186


>gi|254470572|ref|ZP_05083976.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudovibrio sp. JE062]
 gi|211960883|gb|EEA96079.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudovibrio sp. JE062]
          Length = 400

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/183 (13%), Positives = 50/183 (27%), Gaps = 9/183 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS            V  ++   Y     ++ +   C  + I +     +
Sbjct: 15  RVVVAMSGGVDSSVVAGLMKREGYDVVGVTLQLYDHGEAIQRKGACCAGQDIHDARRVAE 74

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L            + +  A    +   P   V     +        A  LG 
Sbjct: 75  KLGIPHYVLD---YESRFKEQVIERFADSYINGETPIPCVTCNQTVKFKDLLETAKDLGA 131

Query: 129 TNIVIGVC---ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYETWKL 183
             +V G       + +     R   +   ++                    + K E  +L
Sbjct: 132 DVLVTGHYVRTGMEGNQLAMFRPVDLDRDQSYFLFATTQEQLDFLRFPLGGMTKPEVREL 191

Query: 184 AQD 186
           A++
Sbjct: 192 ARE 194


>gi|37526694|ref|NP_930038.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Photorhabdus luminescens subsp. laumondii TTO1]
 gi|81571961|sp|Q7MB22|MNMA_PHOLL RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|36786126|emb|CAE15178.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 367

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 53/193 (27%), Gaps = 11/193 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +V  L     + +  E  C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYQVAGLFMKNWEEDDDEEYCS--AATDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +A            +  + I F  F  
Sbjct: 57  ADAQSVCDKLGIELHTVN--FAAEYWDNVFEHFLAEYRAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  L    I  G            +      +          L  +       P+  L
Sbjct: 115 FAAEDLNADYIATGHYVRRRDINGKSQLLRGLDNNKDQSYFLYTLSHQQIAQSLFPVGEL 174

Query: 176 KKYETWKLAQDIG 188
           +K E  ++A+ IG
Sbjct: 175 EKPEVRRIAEKIG 187


>gi|189464269|ref|ZP_03013054.1| hypothetical protein BACINT_00608 [Bacteroides intestinalis DSM
           17393]
 gi|189438059|gb|EDV07044.1| hypothetical protein BACINT_00608 [Bacteroides intestinalis DSM
           17393]
          Length = 401

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 54/195 (27%), Gaps = 6/195 (3%)

Query: 5   IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           ++     ++ FSGG D S T +  A ++   V     + G  +  +L+       K+   
Sbjct: 1   MEDKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSPEQLKTNEENAYKLGAK 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                D   E +   L  +    +        + +    +       R    +   A   
Sbjct: 61  EYVTIDVTQEYYEKSLKYM-VFGNVLRNGTYPISVSSERIFQALAIARYANEIGADAIAH 119

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK----YE 179
              G  N  I    T     P     T+             ++  H       K    Y 
Sbjct: 120 GSTGAGNDQIRFDMTFLVLAPGVEIITLTRDMALSRQEEIDYLNKHGFSADFTKLKYSYN 179

Query: 180 TWKLAQDIGGQDLVN 194
                  I G ++++
Sbjct: 180 VGLWGTSICGGEILD 194


>gi|171464102|ref|YP_001798215.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Polynucleobacter necessarius subsp. necessarius STIR1]
 gi|171193640|gb|ACB44601.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Polynucleobacter necessarius subsp. necessarius STIR1]
          Length = 370

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 48/188 (25%), Gaps = 10/188 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
            +    ++  SGG DSS       ++   V  L     + +  +  C         + + 
Sbjct: 12  SRPKKVVIGMSGGVDSSVAAWMLKEQGFEVIGLFMKNWEDDDSDEYCSARQ-----DWLD 66

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
               +      +            +  +   +      PN  V     I        A  
Sbjct: 67  VVSVADMIGIDVEAVNFATEYRECVFADFLREYAAGRTPNPDVLCNAEIKFKAFLDHAMS 126

Query: 126 LGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           LG   I  G            +       +         L  +    V  PL  + K E 
Sbjct: 127 LGADAIATGHYARVRHESGKVQLLKAVDVSKDQSYFLHRLTQQQLANVMFPLGEIPKTEV 186

Query: 181 WKLAQDIG 188
            K+A  IG
Sbjct: 187 RKIADQIG 194


>gi|241889855|ref|ZP_04777153.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Gemella haemolysans ATCC 10379]
 gi|241863477|gb|EER67861.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Gemella haemolysans ATCC 10379]
          Length = 370

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 55/189 (29%), Gaps = 10/189 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      ++  SGG DSS        +   V  +        + + +  +C+ +K  E +
Sbjct: 1   MNSNKKVVVGMSGGVDSSVTAYLLKQQGYDVIGVFMKNW---EEKDDRGVCLAEKDYEDV 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            K  + L   +   +    +      T  +    +        +     I        A 
Sbjct: 58  IKVCEQLDIPY-YSINFEKEYWDKVFTYFLDEYKKGRTPNPDIMC-NKEIKFKVFLEYAE 115

Query: 125 RLGITNIVIGVCETDYSGYP---DCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYE 179
            LG   +  G               R       +T     L       +  P+  L+K +
Sbjct: 116 DLGADYVATGHYARVKDVDGERLMLRGVDNNKDQTYFLSQLKQHQIKNILFPVGELEKKD 175

Query: 180 TWKLAQDIG 188
             K+A++ G
Sbjct: 176 VRKIAEEAG 184


>gi|294140592|ref|YP_003556570.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Shewanella violacea DSS12]
 gi|293327061|dbj|BAJ01792.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Shewanella violacea DSS12]
          Length = 376

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 52/187 (27%), Gaps = 9/187 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS      L +  +VE L     + +  +  C       + +    
Sbjct: 10  NNKKVIVGMSGGVDSSVSAYLLLKQGYQVEGLFMKNWEEDDTDEYCA--AADDLKDAQAV 67

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H +      +   +     +A            +  + I F  F       L
Sbjct: 68  CDKLGIKLHTVN--FASEYWDNVFEYFLAEYKAGRTPNPDIICNKEIKFKAFLEFADEIL 125

Query: 127 GITNIVIGVCETDYSGYPDCRH-----DTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
               I +G            R                 L  E       P+  L+K E  
Sbjct: 126 DADFIAMGHYVRRSDETGQSRMLRGIDGNKDQSYFLYTLSHEQIARSLFPVGELEKSEVR 185

Query: 182 KLAQDIG 188
           ++A+++G
Sbjct: 186 EIAKEMG 192


>gi|153208618|ref|ZP_01946875.1| thiamine biosynthesis/tRNA modification protein ThiI [Coxiella
           burnetii 'MSU Goat Q177']
 gi|212218606|ref|YP_002305393.1| thiamine biosynthesis protein ThiI [Coxiella burnetii CbuK_Q154]
 gi|120575879|gb|EAX32503.1| thiamine biosynthesis/tRNA modification protein ThiI [Coxiella
           burnetii 'MSU Goat Q177']
 gi|212012868|gb|ACJ20248.1| thiamine biosynthesis protein [Coxiella burnetii CbuK_Q154]
          Length = 392

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 48/181 (26%), Gaps = 25/181 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS       L R   ++ + F                ++K+++L             L 
Sbjct: 191 IDSPVAGWTLLKRGMMIDAVYFH------SFPYTGEKAKEKVIDLARVLTSWKLRAINLH 244

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
           +     I  +                 T +  R ++ +                      
Sbjct: 245 IPYFTKIQETVNKMCPESTW-------TIIHRRFMMRIAEKL------------TKSTYH 285

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
                 +      + I+    +   +++ +  PL+   K +  K+A+ IG   +     E
Sbjct: 286 TLITGENLGQVASQTIQNIAVINQATNLPILRPLISFDKNDIIKIAEKIGTFRISKRPYE 345

Query: 199 E 199
           +
Sbjct: 346 D 346


>gi|90020152|ref|YP_525979.1| thiamine biosynthesis protein ThiI [Saccharophagus degradans 2-40]
 gi|123396662|sp|Q21NG2|THII_SACD2 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|89949752|gb|ABD79767.1| thiamine biosynthesis protein [Saccharophagus degradans 2-40]
          Length = 483

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 60/189 (31%), Gaps = 25/189 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +    S L L SGG DS+      + R  R     F+ G R          +  K +   
Sbjct: 176 MGTQESVLSLISGGYDSTVASFQMIKRGLRTHYCFFNLGGR-------EHELAVKEIAFF 228

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
               +  G  H +          S   + V  +I     P+        + L     +A 
Sbjct: 229 --LWNRFGSTHRVRFI-------SVPFEGVVGEILQKVGPSNMGVVLKRMMLRAGERIAE 279

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           R GI  +V G      S         I ++   +         V  PL+ + K +   ++
Sbjct: 280 RGGIEAMVTGEAVAQVSSQTIPNLSVIDSVTDMM---------VLRPLIVMDKRDIIDIS 330

Query: 185 QDIGGQDLV 193
           + IG ++  
Sbjct: 331 RKIGAEEFS 339


>gi|29654484|ref|NP_820176.1| thiamine biosynthesis protein ThiI [Coxiella burnetii RSA 493]
 gi|154706671|ref|YP_001424627.1| thiamine biosynthesis protein ThiI [Coxiella burnetii Dugway
           5J108-111]
 gi|161830910|ref|YP_001597042.1| thiamine biosynthesis protein ThiI [Coxiella burnetii RSA 331]
 gi|44888460|sp|Q83CD9|THII_COXBU RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|29541751|gb|AAO90690.1| thiamine biosynthesis protein [Coxiella burnetii RSA 493]
 gi|154355957|gb|ABS77419.1| thiamine biosynthesis protein [Coxiella burnetii Dugway 5J108-111]
 gi|161762777|gb|ABX78419.1| thiamine biosynthesis/tRNA modification protein ThiI [Coxiella
           burnetii RSA 331]
          Length = 392

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 48/181 (26%), Gaps = 25/181 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS       L R   ++ + F                ++K+++L             L 
Sbjct: 191 IDSPVAGWTLLKRGMMIDAVYFH------SFPYTGEKAKEKVIDLARVLTSWKLRAINLH 244

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
           +     I  +                 T +  R ++ +                      
Sbjct: 245 IPYFTKIQETVNKMCPESTW-------TIIHRRFMMRIAEKL------------TKSTYH 285

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
                 +      + I+    +   +++ +  PL+   K +  K+A+ IG   +     E
Sbjct: 286 TLITGENLGQVASQTIQNIAVINQATNLPILRPLISFDKNDIIKIAEKIGTFRISKRPYE 345

Query: 199 E 199
           +
Sbjct: 346 D 346


>gi|150015984|ref|YP_001308238.1| tRNA-specific 2-thiouridylase MnmA [Clostridium beijerinckii NCIMB
           8052]
 gi|205813680|sp|A6LSF2|MNMA_CLOB8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|149902449|gb|ABR33282.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium beijerinckii NCIMB 8052]
          Length = 358

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 48/198 (24%), Gaps = 6/198 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                L+  SGG DSS        +   V   +    Q +  E E R      +  +   
Sbjct: 1   MKKKVLVGMSGGVDSSVAAYLLKQQGYDVIGATMQIWQ-HDEEFEEREGGCCSLSAVDDA 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +     D    +    D     +      +  D   PN  +     +        A  +
Sbjct: 60  RRVCDKLDIPFYVLNFRDYFKEKVIDKFVQEYIDGKTPNPCIECNKHLKFDELLRRARGI 119

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK-----KYETW 181
           G   +  G                           + +          +      K +  
Sbjct: 120 GADYVATGHYAKIEKRDDRYLLIRSDDDRKDQTYALYNFTQDQLEHTLMPCGDYEKTKIR 179

Query: 182 KLAQDIGGQDLVNLILEE 199
           ++A++IG         EE
Sbjct: 180 EIAKEIGLAVHNKKDSEE 197


>gi|205822340|sp|A9W8W7|MNMA_METEP RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 385

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 53/199 (26%), Gaps = 14/199 (7%)

Query: 1   MN--DIIKKA--PSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLC 55
           MN  D+ K       ++  SGG DSS            V  ++   Y        +   C
Sbjct: 1   MNSLDLPKPPHETRVVVAMSGGVDSSVVAGLLKREGYDVVGVTLQLYDHGAATHRKGACC 60

Query: 56  VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
             + I +     +      ++L           S+    A        P   V     + 
Sbjct: 61  AGRDIHDARAVAETLGIPHYVLDYED---RFRESVIDRFAESYLSGETPIPCVECNRSVK 117

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDT------IRAIETAINLGMESHVTVH 169
                 LA  LG   +  G      +     R                     E    + 
Sbjct: 118 FRDLLGLARDLGAEALATGHYVASRARPEGGRALYRALDPARDQSYFLYATTPEQLAYLR 177

Query: 170 TPLMWLKKYETWKLAQDIG 188
            PL    K ET  LA+++G
Sbjct: 178 FPLGERPKDETRALARELG 196


>gi|163853494|ref|YP_001641537.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylobacterium extorquens PA1]
 gi|163665099|gb|ABY32466.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylobacterium extorquens PA1]
          Length = 410

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 53/199 (26%), Gaps = 14/199 (7%)

Query: 1   MN--DIIKKA--PSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLC 55
           MN  D+ K       ++  SGG DSS            V  ++   Y        +   C
Sbjct: 26  MNSLDLPKPPHETRVVVAMSGGVDSSVVAGLLKREGYDVVGVTLQLYDHGAATHRKGACC 85

Query: 56  VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
             + I +     +      ++L           S+    A        P   V     + 
Sbjct: 86  AGRDIHDARAVAETLGIPHYVLDYED---RFRESVIDRFAESYLSGETPIPCVECNRSVK 142

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDT------IRAIETAINLGMESHVTVH 169
                 LA  LG   +  G      +     R                     E    + 
Sbjct: 143 FRDLLGLARDLGAEALATGHYVASRARPEGGRALYRALDPARDQSYFLYATTPEQLAYLR 202

Query: 170 TPLMWLKKYETWKLAQDIG 188
            PL    K ET  LA+++G
Sbjct: 203 FPLGERPKDETRALARELG 221


>gi|157375020|ref|YP_001473620.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shewanella sediminis HAW-EB3]
 gi|189040509|sp|A8FUG9|MNMA_SHESH RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|157317394|gb|ABV36492.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shewanella sediminis HAW-EB3]
          Length = 372

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 57/187 (30%), Gaps = 9/187 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS      L +  +VE L     + +  +  C       + +    
Sbjct: 10  NNKKVIVGMSGGVDSSVSAYLLLKQGYQVEGLFMKNWEEDDTDEYCA--AADDLKDAQAV 67

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAAT 121
                 + H +      +   +     +A          + + N  +  +  +       
Sbjct: 68  CDKLGIKLHTVN--FASEYWDNVFEYFLAEYKAGRTPNPDIICNKEIKFKAFLEFADDIL 125

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            A  + + + V    E+  S     R            L  E       P+  L+K E  
Sbjct: 126 DADYIAMGHYVRRSDESGQSQMLRGRDGNKDQSYFLYTLSHEQISRSLFPVGELEKSEVR 185

Query: 182 KLAQDIG 188
           ++A+++G
Sbjct: 186 EIAKEMG 192


>gi|311696298|gb|ADP99171.1| thiamine biosynthesis protein [marine bacterium HP15]
          Length = 462

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 59/181 (32%), Gaps = 25/181 (13%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            + L L SGG DSS      + R  R   L F+ G            V   + +++    
Sbjct: 157 ENVLTLISGGYDSSVAAYLMMRRGLRNHFLFFNLGG-------TAHEV--GVRQVVHYLW 207

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D  G  H            S   + V  +I  +     +        L+ AA +A +   
Sbjct: 208 DRYGASH-------SAKFISVPFEGVVAEIMRSVSHRHWGVVLKRQMLMAAAEIARKNNA 260

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
           + +V G      S       + +      +         V  PL+ + K    ++A++IG
Sbjct: 261 SGVVTGDAVAQVSSQTLSNLNVVDRASDEV---------VLRPLVSMDKESIIRIAREIG 311

Query: 189 G 189
            
Sbjct: 312 T 312


>gi|213418073|ref|ZP_03351147.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 85

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/76 (42%), Positives = 40/76 (52%), Gaps = 9/76 (11%)

Query: 159 NLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGC 218
           NLGM   +   TPLMW+ K ETW LA   G    ++L+ EE+ TCY G +      G GC
Sbjct: 1   NLGMAKDIRFETPLMWIDKAETWALADYWGQ---LDLVREETLTCYNGIK------GDGC 51

Query: 219 NSCPACYLRQKGWMEF 234
             C AC LR  G   +
Sbjct: 52  GHCAACNLRANGLNHY 67


>gi|294155486|ref|YP_003559870.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycoplasma crocodyli MP145]
 gi|291599923|gb|ADE19419.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycoplasma crocodyli MP145]
          Length = 372

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 55/189 (29%), Gaps = 11/189 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-----YGQRNKVELECRLCVR---KK 59
               ++  SGG DSS       ++   V  L                 +    +    + 
Sbjct: 3   KKKVVIGMSGGVDSSVAAYLLKEQGYEVIGLFMRNWDSILNNDILGNEKINQDICPQEQD 62

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
             + +   +      H +    + +   +     +    +        +  + I F  FA
Sbjct: 63  YQDALSVAQKLNIPLHRVD--FVKEYWTNVFNNFIEEYKKGRTPNPDILCNKYIKFNYFA 120

Query: 120 ATLAYRLGITNIVIGVCETDYSGY-PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
                +LG   I +G      +G     + +          +  E    V  PL  L+K 
Sbjct: 121 NYAFDKLGADYIAMGHYAKVENGKLYRAKDENKDQTYFLAQVTEEQLKKVIMPLYDLQKS 180

Query: 179 ETWKLAQDI 187
           +  KLA D+
Sbjct: 181 QIRKLAADL 189


>gi|226226536|ref|YP_002760642.1| tRNA-specific 2-thiouridylase MnmA [Gemmatimonas aurantiaca T-27]
 gi|226089727|dbj|BAH38172.1| tRNA-specific 2-thiouridylase MnmA [Gemmatimonas aurantiaca T-27]
          Length = 381

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 51/193 (26%), Gaps = 8/193 (4%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M  +  K    L+  SGG DSS   +  ++    V  ++           +   C     
Sbjct: 1   MAGLPPKGARVLVAMSGGVDSSVAAAILMEHGCDVVGVTMKLHGDGADVPDRPCCSLDAT 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +     +      ++  L          +  +   +      P   V            
Sbjct: 61  SDARRVCEKLGIPHYVTNLVD---HFSHDVLDDFVQEYARGRTPIPCVRCNTFTKFRDLL 117

Query: 121 TLAYRLGITNIVIGVCETDYSGYP---DCRHDTIRAIETAINLGMESHV--TVHTPLMWL 175
             A  +    +  G        +      R       ++    G++  V   +  P+   
Sbjct: 118 HKADAIDAPWLATGHYARIGHRHGQAVMVRGLDTSKDQSYFLWGIDRPVLDRLVLPIGAQ 177

Query: 176 KKYETWKLAQDIG 188
            K ET  +A+  G
Sbjct: 178 TKAETRDIARRFG 190


>gi|329767202|ref|ZP_08258729.1| tRNA-specific 2-thiouridylase mnmA [Gemella haemolysans M341]
 gi|328836869|gb|EGF86516.1| tRNA-specific 2-thiouridylase mnmA [Gemella haemolysans M341]
          Length = 370

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 55/189 (29%), Gaps = 10/189 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      ++  SGG DSS        +   V  +        + + +  +C+ +K  E +
Sbjct: 1   MNSNKKVVVGMSGGVDSSVTAYLLKQQGYDVIGVFMKNW---EEKDDRGVCLAEKDYEDV 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            K  + L   +   +    +      T  +    +        +     I        A 
Sbjct: 58  IKVCEQLDIPY-YSINFEKEYWDKVFTYFLDEYKKGRTPNPDIMC-NKEIKFKVFLEYAE 115

Query: 125 RLGITNIVIGVCETDYSGYP---DCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYE 179
            LG   +  G               R       +T     L       +  P+  L+K +
Sbjct: 116 DLGADYVATGHYARVKDVDGERLMLRGVDNNKDQTYFLSQLKQHQIKNILFPVGELEKKD 175

Query: 180 TWKLAQDIG 188
             K+A++ G
Sbjct: 176 VRKIAEEAG 184


>gi|271500468|ref|YP_003333493.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Dickeya dadantii Ech586]
 gi|270344023|gb|ACZ76788.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Dickeya dadantii Ech586]
          Length = 370

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 51/192 (26%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +VE L     + +     C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYQVEGLFMKNWEEDDDTEYCS--AATDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +            H +      +   +     +A            +  + I F  F  
Sbjct: 57  ADAQAVCDKLGITLHTVN--FAAEYWDNVFEHFLAEYRAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G            R                 L  +       P+  L
Sbjct: 115 FAAEDLGADYIATGHYVRRQDIDGKSRLLRGLDGNKDQSYFLYTLSHQQLAQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K E  K+A+ +
Sbjct: 175 EKPEVRKIAEQL 186


>gi|110638005|ref|YP_678212.1| tRNA-specific 2-thiouridylase MnmA [Cytophaga hutchinsonii ATCC
           33406]
 gi|110280686|gb|ABG58872.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Cytophaga hutchinsonii ATCC 33406]
          Length = 358

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 54/188 (28%), Gaps = 11/188 (5%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
            SGG DSS       ++   V  ++    DY      + E   C    I +         
Sbjct: 1   MSGGIDSSVAAVMLHEQGYEVIGMTMKTWDYANLGGSKKETGCCSLDSINDARNIAVSLG 60

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
              +I+    + +     +  +   +  D   PN  V     I        A ++    I
Sbjct: 61  FPHYIVD---IREEFGDYVINHFNKEYLDGRTPNPCVLCNTHIKWDSLLRRADKMDCDFI 117

Query: 132 VIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
             G      S            +          +  +S      PL  L K +   +A +
Sbjct: 118 ATGHYAQVRSENNRFVISKGLDENKDQSYALWGISQQSLSRTMFPLGHLHKTDIRAMAAE 177

Query: 187 IGGQDLVN 194
            G  DLVN
Sbjct: 178 RGFMDLVN 185


>gi|300774572|ref|ZP_07084435.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chryseobacterium gleum ATCC 35910]
 gi|300506387|gb|EFK37522.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chryseobacterium gleum ATCC 35910]
          Length = 395

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 51/189 (26%), Gaps = 13/189 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS        +   V  L         V LE      +   + +   + 
Sbjct: 2   KIVVGLSGGVDSSVTAYLLQQQGHEVVALFMRNWNDASVTLEDECPWIEDSNDALMVAQK 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 ++ ++ L                +    PN  V     +        A  LG  
Sbjct: 62  LGIPFQVIDMSELYKERIVDYMFAE---YEKGRTPNPDVLCNREVKFDVFMKTAMSLGAD 118

Query: 130 NIVIGVCETDYSGYPDCR----------HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            +  G      S + +             +          L  +       P+  L K +
Sbjct: 119 KVATGHYARVTSTFDENGKEIFHLLAGKDNNKDQSYFLCQLSQDQLSKALFPIGELTKPQ 178

Query: 180 TWKLAQDIG 188
             ++A++IG
Sbjct: 179 VREIAKEIG 187


>gi|41615210|ref|NP_963708.1| hypothetical protein NEQ423 [Nanoarchaeum equitans Kin4-M]
 gi|40068934|gb|AAR39269.1| NEQ423 [Nanoarchaeum equitans Kin4-M]
          Length = 433

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 75/199 (37%), Gaps = 29/199 (14%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL LFSGG DS+    +A+ R      + F+              + K + E+  K K+
Sbjct: 170 KALSLFSGGFDSTLTAIFAIKRGVIPIIVYFN---------PFDDFIEKTVYEVYEKIKE 220

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              +   + +        S +   + M +++           +      A  LA +LG+ 
Sbjct: 221 FSPDSIFISIPF------SEVYYQLLMNVEEKYRQILLKIIMHK----TAKALAKKLGLK 270

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
           +I IG      S       +TI ++           ++V  P+  L K E  +  +++G 
Sbjct: 271 SIFIGESIGQKSTQTLKSLETIDSL-------TLDSISVFRPIAGLDKEEVIEYIRELGL 323

Query: 190 QDLVNLILEESHTCYLGKR 208
            D V  + E    C LG++
Sbjct: 324 YDYVIKVKEM---CALGRK 339


>gi|116754202|ref|YP_843320.1| thiamine biosynthesis protein [Methanosaeta thermophila PT]
 gi|116665653|gb|ABK14680.1| thiamine biosynthesis protein [Methanosaeta thermophila PT]
          Length = 335

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 57/183 (31%), Gaps = 26/183 (14%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           L L SGG DS       + R   V  L  D              + + + +   +   S 
Sbjct: 131 LALISGGIDSPVAAWLIMRRGCPVALLHLD-------VSPYADSIEQVVRQ--AEVLQSW 181

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
                L LAI+         + + M           +  R +  +     +  RL    I
Sbjct: 182 MSGRRLDLAIVR------NARAIEMISSRYPRETCVLCRRLMYHISTL--VMKRLRAKGI 233

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V G      +          +  E  +   +     V+ PL+ + K E  +LA+ IG  D
Sbjct: 234 VTGYSLGQVAS---------QTPENIMAEQVGIEAPVYHPLIAMDKTEIIELARRIGTYD 284

Query: 192 LVN 194
           +  
Sbjct: 285 ISI 287


>gi|253682565|ref|ZP_04863362.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum D str. 1873]
 gi|253562277|gb|EES91729.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum D str. 1873]
          Length = 346

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 52/186 (27%), Gaps = 20/186 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +    +  SGG DSS       ++   +  ++      +  E      + +K+      
Sbjct: 1   MSKKVAIGLSGGVDSSVAAYLLKEKGYDLIGITMKVSDVDVSED--AAKIAQKLD----- 53

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   HIL    L D   + +  N A +      PN        I        A  L
Sbjct: 54  -----IPYHILD---LRDEFKNHVIDNFAKEYLQGRTPNPCAMCNKYIKFGVLLQKAKEL 105

Query: 127 GITNIVIGVCETDYSGYPDC-----RHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           G   I  G                 + D         +L  +    +  P     K +  
Sbjct: 106 GADYIATGHYARVEEHNGRYLVLNAKDDKKDQTYMFYSLTQDVLKHILMPCGEYTKVQIR 165

Query: 182 KLAQDI 187
           ++A+++
Sbjct: 166 EIARNL 171


>gi|212224909|ref|YP_002308145.1| Hypothetical ATPase [Thermococcus onnurineus NA1]
 gi|212009866|gb|ACJ17248.1| Hypothetical ATPase [Thermococcus onnurineus NA1]
          Length = 276

 Score = 61.1 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 2/69 (2%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKI 60
           D++KK   A+L FSGG+DS+  L  A + +    +E +  D+G   +  +E    + + +
Sbjct: 47  DLMKKVDKAILAFSGGKDSTVALYLAKEVYKVPELEAVMIDHGLMAEEAIENAKRIAEHL 106

Query: 61  VELMPKWKD 69
                  + 
Sbjct: 107 NVPFRILRY 115


>gi|293364049|ref|ZP_06610785.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycoplasma alligatoris A21JP2]
 gi|292552539|gb|EFF41313.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycoplasma alligatoris A21JP2]
          Length = 372

 Score = 60.7 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 56/190 (29%), Gaps = 11/190 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIV---- 61
                ++  SGG DSS       ++   V  L   ++      ++     + + I     
Sbjct: 2   NKKRVVIGMSGGVDSSVAAYLLKEQGYEVVGLFMRNWDSLLNNDILGNEKITQDICPQEQ 61

Query: 62  ---ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
              + +   +      H +    + +   +     +    +        +  + I F  F
Sbjct: 62  DYQDALSVCQKLQIPLHRVD--FVKEYWQNVFNNFIEEYKKARTPNPDILCNKYIKFNAF 119

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDC-RHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
           A      L    I +G       G     + +          L  E    V  PL  L+K
Sbjct: 120 AKHAFNELKADYIAMGHYANVVDGRLYKAKDENKDQTYFLAQLSHEQLKNVIMPLANLEK 179

Query: 178 YETWKLAQDI 187
            +  K+A ++
Sbjct: 180 TQIRKIALEL 189


>gi|212212430|ref|YP_002303366.1| thiamine biosynthesis protein ThiI [Coxiella burnetii CbuG_Q212]
 gi|212010840|gb|ACJ18221.1| thiamine biosynthesis protein [Coxiella burnetii CbuG_Q212]
          Length = 392

 Score = 60.7 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 49/181 (27%), Gaps = 25/181 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS       L R   ++ + F                ++K+++L             L 
Sbjct: 191 IDSPVAGWTLLKRGMMIDAVYFH------SFPYTGEKAKEKVIDLARVLTSWKLRAINLH 244

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
           +     I  +                 T +  R ++ +                      
Sbjct: 245 IPYFTKIQETVNKMCPESTW-------TIIHRRFMMRIAEKL------------TKSTYH 285

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
                 +      + I+    +   +++T+  PL+   K +  K+A+ IG   +     E
Sbjct: 286 TLITGENLGQVASQTIQNIAVINQATNLTILRPLISFDKNDIIKIAEKIGTFRISKRPYE 345

Query: 199 E 199
           +
Sbjct: 346 D 346


>gi|47458906|ref|YP_015768.1| thiamine biosynthesis protein thiI [Mycoplasma mobile 163K]
 gi|47458234|gb|AAT27557.1| thiamine biosynthesis protein thiI [Mycoplasma mobile 163K]
          Length = 399

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 57/188 (30%), Gaps = 29/188 (15%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  A+ L SGG DS       + R   VE ++F                 KK   ++ + 
Sbjct: 181 SGKAIHLISGGFDSPVASFLMMKRGFEVEFVNF------ITPPHTDDLTVKKTKMILQEL 234

Query: 68  KDSL--GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  + H++    L +    S  +N              +  R+   +     +A +
Sbjct: 235 TKYQSKIKLHLIKFTDLMNYLGLSPKQN----------YKVVLMRRSFYRISQK--IAEK 282

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                I  G      +         I++            + +  PL    K E  K+++
Sbjct: 283 NNSIIISNGENIGQVASQTAEAIYVIQS---------GIKIPIIRPLATFDKNEIIKISK 333

Query: 186 DIGGQDLV 193
           +I   D+ 
Sbjct: 334 EIKTHDIS 341


>gi|23012016|ref|ZP_00052207.1| COG0482: Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase, contains the PP-loop ATPase domain
           [Magnetospirillum magnetotacticum MS-1]
          Length = 403

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 51/199 (25%), Gaps = 14/199 (7%)

Query: 1   MN--DIIKKA--PSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLC 55
           MN  D+ K       ++  SGG DSS            V  ++   Y        +   C
Sbjct: 19  MNSLDLPKPPHETRVVVAMSGGVDSSVVAGLLKREGYDVVGVTLQLYDHGAATHRKGACC 78

Query: 56  VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
             + I +     +      ++L           S+    A        P   V     + 
Sbjct: 79  AGRDIHDARAVAETLGIPHYVLDYED---KFRESVIDRFAESYLSGETPIPCVECNRSVK 135

Query: 116 LVFAATLAYRLGI------TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
                 LA  LG         +          G                    E    + 
Sbjct: 136 FRDLLALARDLGAEALATGHYVASRPLAEGGRGLFRALDPARDQSYFLYATTPEQLAFLR 195

Query: 170 TPLMWLKKYETWKLAQDIG 188
            PL    K ET  LA+++G
Sbjct: 196 FPLGERPKDETRALARELG 214


>gi|269964052|ref|ZP_06178357.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269831193|gb|EEZ85347.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 73

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 9/62 (14%)

Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
           MWL K ETW LA      D + L+ E + TCY G        G GC  CP+C LR+ G  
Sbjct: 1   MWLNKAETWALADQ---YDALQLVRENTLTCYNGI------IGDGCGDCPSCDLRKAGLD 51

Query: 233 EF 234
           ++
Sbjct: 52  DY 53


>gi|198282965|ref|YP_002219286.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218666259|ref|YP_002425168.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|259495823|sp|B7J5X6|MNMA_ACIF2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|259495824|sp|B5ENY8|MNMA_ACIF5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|198247486|gb|ACH83079.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218518472|gb|ACK79058.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 352

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 54/209 (25%), Gaps = 16/209 (7%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             AL+  SGG DS+        +   +  ++       ++    R C  K I +      
Sbjct: 4   KKALIALSGGVDSAVAALLMQGQGYELTGVTM------RLWPRSRCCDEKDIEDAAEICA 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                  +L            +        Q    PN        +          +LG 
Sbjct: 58  RLGIPYTVLDYREAFRRQVVDVFVAE---YQAGRTPNPCARCNQFLKFDALLAEGEKLGA 114

Query: 129 TNIVIGVCET-----DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           T +  G           +     R            +G      +  P+  + K E   +
Sbjct: 115 TMLATGHYARLAETSSGTALLRGRDHAKDQSYFLFAIGAGILSRLRFPVGGMNKDEVRAM 174

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRY 212
           A+  G         ++   C++   D R 
Sbjct: 175 ARKHGLPVAAKQDSQDI--CFVPDGDYRR 201


>gi|92116313|ref|YP_576042.1| tRNA-specific 2-thiouridylase MnmA [Nitrobacter hamburgensis X14]
 gi|122418585|sp|Q1QQB5|MNMA_NITHX RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|91799207|gb|ABE61582.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Nitrobacter hamburgensis X14]
          Length = 400

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 48/186 (25%), Gaps = 10/186 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +        V  ++   Y        +   C  + I +     +
Sbjct: 15  RVVVAMSGGVDSSVTAALLKSEGYDVVGITLQLYDHGAATHRKGACCAGQDIHDARNVAE 74

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++ +N A        P   +    ++        A  LG 
Sbjct: 75  RLGIPHYVLDYEN---RFRETVIENFADSYASGETPVPCIECNRLVKFRDLLATARELGA 131

Query: 129 ------TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
                   +                               E    +  PL  + K +T +
Sbjct: 132 AALATGHYVASHRMAGGSRALLCAADADRDQSYFLFATTREQLDFLRFPLGDMTKPQTRE 191

Query: 183 LAQDIG 188
           LA+  G
Sbjct: 192 LARSFG 197


>gi|269139398|ref|YP_003296099.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Edwardsiella tarda EIB202]
 gi|267985059|gb|ACY84888.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Edwardsiella tarda EIB202]
 gi|304559294|gb|ADM41958.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Edwardsiella tarda FL6-60]
          Length = 367

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 50/192 (26%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +V  L     + +  +  C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYQVAGLFMKNWEEDDSDEYCS--AATDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +             +  + I F  F  
Sbjct: 57  ADAQAVCDRLGIELHTVN--FAAEYWDNVFELFLQEYRAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G            +                 L  +       P+  L
Sbjct: 115 FAAEDLGADYIATGHYVRRRDINGTTQLLRGVDANKDQSYFLYTLSHQQVAQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K E  ++A  +
Sbjct: 175 EKPEVRRIAAQL 186


>gi|238920209|ref|YP_002933724.1| tRNA-specific 2-thiouridylase MnmA [Edwardsiella ictaluri 93-146]
 gi|259495829|sp|C5B8B9|MNMA_EDWI9 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|238869778|gb|ACR69489.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
           putative [Edwardsiella ictaluri 93-146]
          Length = 367

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 50/192 (26%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +V  L     + +  +  C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYQVAGLFMKNWEEDDSDEYCS--AATDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +             +  + I F  F  
Sbjct: 57  ADAQAVCDRLGIELHTVN--FAAEYWDNVFELFLQEYRAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G            +                 L  +       P+  L
Sbjct: 115 FAAEDLGADYIATGHYVRRRDINGTTQLLRGVDANKDQSYFLYTLSHQQVAQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K E  ++A  +
Sbjct: 175 EKPEVRRIAAQL 186


>gi|121602707|ref|YP_989294.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bartonella bacilliformis KC583]
 gi|166234845|sp|A1UTJ1|MNMA_BARBK RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|120614884|gb|ABM45485.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bartonella bacilliformis KC583]
          Length = 391

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 46/188 (24%), Gaps = 9/188 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
           +    ++  SGG DSS            V  ++   Y            C  + I +   
Sbjct: 13  ENSRVVVAMSGGVDSSVVAGLLKREGYDVVGITLQLYDHGAATHRAGACCAGQDIEDARR 72

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +      ++L           ++    A        P   V     +        A  
Sbjct: 73  VAETLRIPYYVLD---YESRFREAVIDPFAESYARGETPIPCVACNQTVKFADLLVTARE 129

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTI-----RAIETAINLGMESHVTVHTPLMWLKKYET 180
           LG   +  G      S                          E    +  PL  L K   
Sbjct: 130 LGADALATGHYIRSVSYGTHRALFRPLDSERDQSYFLFATTQEQIDYLRFPLGNLPKARV 189

Query: 181 WKLAQDIG 188
            ++A+++G
Sbjct: 190 REIAKEMG 197


>gi|227111563|ref|ZP_03825219.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
 gi|227327064|ref|ZP_03831088.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 368

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 52/192 (27%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +   VE L     + +     C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYHVEGLFMKNWEEDDDTEYCS--AATDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +             +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G     +      R                 L  E       P+  L
Sbjct: 115 FAAEDLGADYIATGHYVRRHDVDGKSRLLRGMDGNKDQSYFLYTLSHEQIAQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K +  K+A+++
Sbjct: 175 EKPQVRKIAEEL 186


>gi|332981931|ref|YP_004463372.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mahella australiensis 50-1 BON]
 gi|332699609|gb|AEE96550.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mahella australiensis 50-1 BON]
          Length = 360

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 53/188 (28%), Gaps = 7/188 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS        +   V  ++    Q +  E +        +  +    
Sbjct: 3   KNRVVVGMSGGVDSSVTAYLLKQQGYDVIGVTMQVWQDDDPERQRLEGGCCSLYAVDDAR 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           + +   D    +    D+    +      +      PN  +     I        A+ +G
Sbjct: 63  RVAQMLDIPYYVMNFKDVFRRKVIDYFVDEYTKGRTPNPCLACNRYIKFEELMRRAHAIG 122

Query: 128 ITNIVIGVCETDYSGYPDCRH----DTIRAIETAINLGMESHVTVHTPLMWL---KKYET 180
              I  G            R           + +  L   +   +   LM L    K E 
Sbjct: 123 AYYIATGHYAKIEYDEDLRRFILKRSIDDKKDQSYVLYTFTQYQLEHTLMPLGSYTKTEV 182

Query: 181 WKLAQDIG 188
            ++A+ IG
Sbjct: 183 REIARKIG 190


>gi|332162070|ref|YP_004298647.1| tRNA-specific 2-thiouridylase MnmA [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325666300|gb|ADZ42944.1| tRNA-specific 2-thiouridylase MnmA [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330860067|emb|CBX70393.1| tRNA-specific 2-thiouridylase mnmA [Yersinia enterocolitica W22703]
          Length = 373

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 51/192 (26%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +V  L     + +  E  C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYQVAGLFMKNWEEDDGEEYCS--AATDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +             +  + I F  F  
Sbjct: 57  ADAQAVCDKLGMELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G            R                 L  E       P+  L
Sbjct: 115 FAAEDLGADYIATGHYVRRQDVNGKSRLLRGLDGNKDQSYFLYTLSHEQLAQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K E  ++A+ +
Sbjct: 175 EKPEVRRIAEQL 186


>gi|123442025|ref|YP_001006008.1| tRNA-specific 2-thiouridylase MnmA [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|205828986|sp|A1JLK6|MNMA_YERE8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|122088986|emb|CAL11797.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia enterocolitica subsp. enterocolitica 8081]
          Length = 373

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 51/192 (26%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +V  L     + +  E  C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYQVAGLFMKNWEEDDGEEYCS--AATDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +             +  + I F  F  
Sbjct: 57  ADAQAVCDKLGMELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G            R                 L  E       P+  L
Sbjct: 115 FAAEDLGADYIATGHYVRRQDVNGKSRLLRGLDGNKDQSYFLYTLSHEQLAQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K E  ++A+ +
Sbjct: 175 EKPEVRRIAEQL 186


>gi|238796003|ref|ZP_04639515.1| tRNA-specific 2-thiouridylase mnmA [Yersinia mollaretii ATCC 43969]
 gi|238720208|gb|EEQ12012.1| tRNA-specific 2-thiouridylase mnmA [Yersinia mollaretii ATCC 43969]
          Length = 373

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 51/192 (26%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +V  L     + +  E  C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYQVAGLFMKNWEEDDGEEYCS--AATDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +             +  + I F  F  
Sbjct: 57  ADAQAVCDKLGMELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G            R                 L  E       P+  L
Sbjct: 115 FAAEDLGADYIATGHYVRRQDVNGKSRLLRGLDGNKDQSYFLYTLSHEQLAQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K E  ++A+ +
Sbjct: 175 EKPEVRRIAEQL 186


>gi|253688256|ref|YP_003017446.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|259495833|sp|C6DFW7|MNMA_PECCP RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|251754834|gb|ACT12910.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 368

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 52/192 (27%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +   VE L     + +     C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYHVEGLFMKNWEEDDDTEYCS--AATDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +             +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G     +      R                 L  E       P+  L
Sbjct: 115 FAAEDLGADYIATGHYVRRHDVDGKSRLLRGMDGNKDQSYFLYTLSHEQIAQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K +  K+A+++
Sbjct: 175 EKPQVRKIAEEL 186


>gi|318606118|emb|CBY27616.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia enterocolitica subsp. palearctica Y11]
          Length = 373

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 51/192 (26%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +V  L     + +  E  C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYQVAGLFMKNWEEDDGEEYCS--AATDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +             +  + I F  F  
Sbjct: 57  ADAQAVCDKLGMELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G            R                 L  E       P+  L
Sbjct: 115 FAAEDLGADYIATGHYVRRQDVNGKSRLLRGLDGNKDQSYFLYTLSHEQLTQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K E  ++A+ +
Sbjct: 175 EKPEVRRIAEQL 186


>gi|316935452|ref|YP_004110434.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhodopseudomonas palustris DX-1]
 gi|315603166|gb|ADU45701.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhodopseudomonas palustris DX-1]
          Length = 401

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 52/186 (27%), Gaps = 10/186 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +    +   V  ++   Y     +  +   C  + I +     +
Sbjct: 19  RVVVAMSGGVDSSATAALLKAQGYDVVGITLQLYDHGAAIHRKGACCAGQDIHDARAVAE 78

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           S+  + A        P   +     +        A  LG 
Sbjct: 79  RIGIPHYVLD---YESRFRESVIDSFADSYASGETPVPCIECNRSVKFRDLLATARELGA 135

Query: 129 TNIVIGVCETDYSGYPDCR------HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           + +  G   +        R                     E    +  PL  + K +T +
Sbjct: 136 SALATGHYVSSRRLENGSRALVCAADRDRDQSYFLFATTREQLQFLRFPLGDMTKPQTRE 195

Query: 183 LAQDIG 188
           LA+  G
Sbjct: 196 LARQFG 201


>gi|118593646|ref|ZP_01551022.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Stappia aggregata IAM 12614]
 gi|118433757|gb|EAV40418.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Stappia aggregata IAM 12614]
          Length = 392

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 45/185 (24%), Gaps = 9/185 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +        V  ++   Y     V      C    I +     +
Sbjct: 15  RVVVAMSGGVDSSVVAALMKAEGYDVIGVTLQLYDHGAAVSKAKSCCAGVDIHDARRAAE 74

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L               +  +  +        V     +        A  LG 
Sbjct: 75  TIGIPHYVLDYESRFKEQVMDRFADSYIAGETPIPC---VSCNQTVKFTDLLKTAKDLGA 131

Query: 129 TNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +     V    + +                       +    +  PL  + K +  +L
Sbjct: 132 DALATGHYVRSTQQGNKRALFRPADLDRDQSYFLFATTQDQLDFIRFPLGGMPKSKVREL 191

Query: 184 AQDIG 188
           A + G
Sbjct: 192 AAEFG 196


>gi|220925891|ref|YP_002501193.1| tRNA-specific 2-thiouridylase MnmA [Methylobacterium nodulans ORS
           2060]
 gi|254811453|sp|B8IU32|MNMA_METNO RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|219950498|gb|ACL60890.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylobacterium nodulans ORS 2060]
          Length = 382

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 54/199 (27%), Gaps = 14/199 (7%)

Query: 1   MN--DIIKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLC 55
           MN  D+ K       ++  SGG DSS        +   V  ++   Y            C
Sbjct: 1   MNSLDLPKAPQDTRVVVAMSGGVDSSVVAGLLKRQGYDVVGITLQLYDHGAATHRRGACC 60

Query: 56  VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
             + I +     +      ++L           ++    A        P   V     I 
Sbjct: 61  AGQDIHDARRAAETLGIPHYVLDYED---RFREAVIDRFADSYIHGETPIPCVECNRSIK 117

Query: 116 LVFAATLAYRLGITNI----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVH 169
                  A  LG   +     +             R       ++       +     + 
Sbjct: 118 FRDLLATALDLGADALATGHYVASRPRPGGSRALYRALDPARDQSYFLYATTAEQLDVLR 177

Query: 170 TPLMWLKKYETWKLAQDIG 188
            PL  L K ET +LA++ G
Sbjct: 178 FPLGELPKDETRRLAREFG 196


>gi|315231454|ref|YP_004071890.1| hypothetical protein TERMP_01692 [Thermococcus barophilus MP]
 gi|315184482|gb|ADT84667.1| hypothetical protein TERMP_01692 [Thermococcus barophilus MP]
          Length = 274

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRK 58
           + +++K    A++ FSGG+DS+  L  A + +    +E +  D+G      +E    + +
Sbjct: 45  LEELMKDVDKAIVAFSGGKDSTVALYLAKEVYKVPELEAVMIDHGFMAGEAIENAKRIAE 104

Query: 59  KIVELMPKWKD 69
            +       + 
Sbjct: 105 YLNVQFTILRY 115


>gi|146342725|ref|YP_001207773.1| tRNA-specific 2-thiouridylase MnmA [Bradyrhizobium sp. ORS278]
 gi|205811327|sp|A4Z082|MNMA_BRASO RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|146195531|emb|CAL79558.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bradyrhizobium sp. ORS278]
          Length = 397

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 48/184 (26%), Gaps = 10/184 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +    +   V  ++   Y        +   C  + I +     +
Sbjct: 15  RVVVAMSGGVDSSVTAALLKSQGYDVVGITLQLYDHGAATHRKGACCAGQDIHDARNVAE 74

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           S+  N A        P   +     I        A  LG 
Sbjct: 75  RLGIPHYVLDYED---RFRESVIDNFAASYASGETPVPCIECNRAIKFGDLLKTARELGA 131

Query: 129 TNIVIGVCETDYSGYPDCR------HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           + +  G            R                     E    +  PL  + K E  +
Sbjct: 132 SVLATGHYVASRRLPDGSRALTCAADADRDQSYFLFATTREQLDYLRFPLGDMTKPEVRE 191

Query: 183 LAQD 186
           LA+ 
Sbjct: 192 LARR 195


>gi|103487513|ref|YP_617074.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sphingopyxis alaskensis RB2256]
 gi|123379667|sp|Q1GRI1|MNMA_SPHAL RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|98977590|gb|ABF53741.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sphingopyxis alaskensis RB2256]
          Length = 382

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 51/185 (27%), Gaps = 3/185 (1%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
           K    ++  SGG DSS   + A      V  ++   Y    K +     C  + I +   
Sbjct: 27  KDRRIVVAMSGGVDSSVVAALAARSGAEVIGVTLQLYDHGAKAKRVGACCAGQDIRDARA 86

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL--A 123
                    H+         +      +  +  +          G     L   A    A
Sbjct: 87  VADRLGFVHHVHDHESRFRDTVIDQFADEYLAGRTPIPCVRCNMGVKFTDLFQLARELGA 146

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             L   + V  V   D +                     E    +  PL  L+K    ++
Sbjct: 147 DCLATGHYVRRVMGPDGAEMHRAVDPARDQSYFLFATTQEQLDFLRFPLGGLEKNVVREI 206

Query: 184 AQDIG 188
           A+D+G
Sbjct: 207 ARDLG 211


>gi|50120073|ref|YP_049240.1| thiamine biosynthesis protein ThiI [Pectobacterium atrosepticum
           SCRI1043]
 gi|81827199|sp|Q6D841|THII_ERWCT RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|49610599|emb|CAG74044.1| thiamine biosynthesis protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 482

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVKQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +           V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAI-------DFDPVVGEILEKVDDGQMGVVLKRMMVRAASKIAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K    K A+++G +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIIKQARELGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|50121369|ref|YP_050536.1| tRNA-specific 2-thiouridylase MnmA [Pectobacterium atrosepticum
           SCRI1043]
 gi|71658013|sp|Q6D4E9|MNMA_ERWCT RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|49611895|emb|CAG75344.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pectobacterium atrosepticum SCRI1043]
          Length = 368

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 52/192 (27%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +   VE L     + +     C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYHVEGLFMKNWEEDDDTEYCS--AATDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +             +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G     +      R                 L  E       P+  L
Sbjct: 115 FAAEDLGADYIATGHYVRRHDVDGKSRLLRGMDGNKDQSYFLYTLSHEQIAQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K +  K+A+++
Sbjct: 175 EKPQVRKIAEEL 186


>gi|300087159|ref|YP_003757681.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Dehalogenimonas lykanthroporepellens BL-DC-9]
 gi|299526892|gb|ADJ25360.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Dehalogenimonas lykanthroporepellens BL-DC-9]
          Length = 359

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 55/197 (27%), Gaps = 19/197 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV-------RKK 59
                L+  SGG DS+   + A +    V  +        +   E             + 
Sbjct: 1   MREKILVALSGGVDSAVAAALAQESGYDVTGIIMTIYDGPESPNEKSHKHGCYGPGEEED 60

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           + +     +    +  +     L +   +++ ++   + +    PN  V     I L   
Sbjct: 61  VKDAEAVAQHLGIKLQVFD---LKNEYRTNILESFKNEYRAGRTPNPCVYCNQQIKLGAL 117

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDC---------RHDTIRAIETAINLGMESHVTVHT 170
              A   G+    +       + +            R+           L       +  
Sbjct: 118 LDKARESGLDFEFVFTGHYARTDFHHQSNRYRLLRARYHNKDQSYFLSRLSQAQLRILRF 177

Query: 171 PLMWLKKYETWKLAQDI 187
           PL  L K E  KLA+ I
Sbjct: 178 PLGDLSKDEVRKLAERI 194


>gi|238749636|ref|ZP_04611141.1| tRNA-specific 2-thiouridylase mnmA [Yersinia rohdei ATCC 43380]
 gi|238712291|gb|EEQ04504.1| tRNA-specific 2-thiouridylase mnmA [Yersinia rohdei ATCC 43380]
          Length = 373

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 51/192 (26%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +V  L     + +  E  C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYQVAGLFMKNWEEDDGEEYCS--AATDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +             +  + I F  F  
Sbjct: 57  ADAQAVCDKLGMELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G            R                 L  E       P+  L
Sbjct: 115 FAAEDLGADYIATGHYVRRQDVDGKSRLLRGLDGNKDQSYFLYTLSHEQLAQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K E  ++A+ +
Sbjct: 175 EKPEVRRIAEQL 186


>gi|238758422|ref|ZP_04619599.1| tRNA-specific 2-thiouridylase mnmA [Yersinia aldovae ATCC 35236]
 gi|238703326|gb|EEP95866.1| tRNA-specific 2-thiouridylase mnmA [Yersinia aldovae ATCC 35236]
          Length = 373

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 51/192 (26%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +V  L     + +  E  C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYQVAGLFMKNWEEDDGEEYCS--AATDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +             +  + I F  F  
Sbjct: 57  ADAQAVCDKLGMELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G            R                 L  E       P+  L
Sbjct: 115 FAAEDLGADYIATGHYVRRQDVDGKSRLLRGLDGNKDQSYFLYTLSHEQLAQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K E  ++A+ +
Sbjct: 175 EKPEVRRIAEQL 186


>gi|205822121|sp|Q6NA79|MNMA_RHOPA RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 397

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 52/186 (27%), Gaps = 10/186 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +    +   V  ++   Y     +  +   C  + I +     +
Sbjct: 15  RVVVAMSGGVDSSATAALLKAQGYDVVGITLQLYDHGEAIHRKGACCAGQDIHDARAVAE 74

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           S+  + A        P   +     +        A  LG 
Sbjct: 75  RIGIPHYVLD---YESRFRESVIDSFADSYASGETPVPCIECNRSVKFRDLLATARELGA 131

Query: 129 TNIVIGVCETDYSGYPDCR------HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           + +  G   +        R                     E    +  PL  + K +T +
Sbjct: 132 SALATGHYVSSRRLDDGSRALVCAADRDRDQSYFLFATTREQLQFLRFPLGDMTKPQTRE 191

Query: 183 LAQDIG 188
           LA+  G
Sbjct: 192 LARQFG 197


>gi|192289904|ref|YP_001990509.1| tRNA-specific 2-thiouridylase MnmA [Rhodopseudomonas palustris
           TIE-1]
 gi|192283653|gb|ACF00034.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhodopseudomonas palustris TIE-1]
          Length = 401

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 52/186 (27%), Gaps = 10/186 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +    +   V  ++   Y     +  +   C  + I +     +
Sbjct: 19  RVVVAMSGGVDSSATAALLKAQGYDVVGITLQLYDHGEAIHRKGACCAGQDIHDARAVAE 78

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           S+  + A        P   +     +        A  LG 
Sbjct: 79  RIGIPHYVLD---YESRFRESVIDSFADSYASGETPVPCIECNRSVKFRDLLATARELGA 135

Query: 129 TNIVIGVCETDYSGYPDCR------HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           + +  G   +        R                     E    +  PL  + K +T +
Sbjct: 136 SALATGHYVSSRRLDDGSRALVCAADRDRDQSYFLFATTREQLQFLRFPLGDMTKPQTRE 195

Query: 183 LAQDIG 188
           LA+  G
Sbjct: 196 LARQFG 201


>gi|39934381|ref|NP_946657.1| tRNA-specific 2-thiouridylase MnmA [Rhodopseudomonas palustris
           CGA009]
 gi|39648230|emb|CAE26749.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhodopseudomonas palustris CGA009]
          Length = 401

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 52/186 (27%), Gaps = 10/186 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +    +   V  ++   Y     +  +   C  + I +     +
Sbjct: 19  RVVVAMSGGVDSSATAALLKAQGYDVVGITLQLYDHGEAIHRKGACCAGQDIHDARAVAE 78

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           S+  + A        P   +     +        A  LG 
Sbjct: 79  RIGIPHYVLD---YESRFRESVIDSFADSYASGETPVPCIECNRSVKFRDLLATARELGA 135

Query: 129 TNIVIGVCETDYSGYPDCR------HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           + +  G   +        R                     E    +  PL  + K +T +
Sbjct: 136 SALATGHYVSSRRLDDGSRALVCAADRDRDQSYFLFATTREQLQFLRFPLGDMTKPQTRE 195

Query: 183 LAQDIG 188
           LA+  G
Sbjct: 196 LARQFG 201


>gi|238791830|ref|ZP_04635467.1| tRNA-specific 2-thiouridylase mnmA [Yersinia intermedia ATCC 29909]
 gi|238728934|gb|EEQ20451.1| tRNA-specific 2-thiouridylase mnmA [Yersinia intermedia ATCC 29909]
          Length = 373

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 51/192 (26%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +V  L     + +  E  C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYQVAGLFMKNWEEDDGEEYCS--AATDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +             +  + I F  F  
Sbjct: 57  ADAQAVCDKLGMELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G            R                 L  E       P+  L
Sbjct: 115 FAAEDLGADYIATGHYVRRQDVDGKSRLLRGLDGNKDQSYFLYTLSHEQLAQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K E  ++A+ +
Sbjct: 175 EKPEVRRIAEQL 186


>gi|238762225|ref|ZP_04623197.1| tRNA-specific 2-thiouridylase mnmA [Yersinia kristensenii ATCC
           33638]
 gi|238699572|gb|EEP92317.1| tRNA-specific 2-thiouridylase mnmA [Yersinia kristensenii ATCC
           33638]
          Length = 373

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 51/192 (26%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +V  L     + +  E  C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYQVAGLFMKNWEEDDGEEYCS--AATDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +             +  + I F  F  
Sbjct: 57  ADAQAVCDKLGMELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G            R                 L  E       P+  L
Sbjct: 115 FAAEDLGADYIATGHYVRRQDVEGKSRLLRGLDGNKDQSYFLYTLSHEQLAQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K E  ++A+ +
Sbjct: 175 EKPEVRRIAEQL 186


>gi|304403980|ref|ZP_07385642.1| thiamine biosynthesis/tRNA modification protein ThiI [Paenibacillus
           curdlanolyticus YK9]
 gi|304346958|gb|EFM12790.1| thiamine biosynthesis/tRNA modification protein ThiI [Paenibacillus
           curdlanolyticus YK9]
          Length = 422

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 53/181 (29%), Gaps = 24/181 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS       + +   +E + F                ++K+V L  +     G    L 
Sbjct: 192 IDSPVAGWLGMRKGLELEAVHFY------SYPFTSEQAKEKVVTLAKRLLHFTGGKFKLH 245

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
           L              +  +   +N     +       L     +A R     IV G    
Sbjct: 246 LVPF---------TEIQTRFAQSNQERLIITLMRRAMLRITEIIAARESAHAIVTGDSLG 296

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
             +       +          +G  + + +  PL+ + K E  ++A+ IG  +   L  E
Sbjct: 297 QVASQTLGSMN---------VIGRATELPILRPLVMMDKIEIIRIAERIGTYETSILPFE 347

Query: 199 E 199
           +
Sbjct: 348 D 348


>gi|104779669|ref|YP_606167.1| thiamine biosynthesis protein ThiI [Pseudomonas entomophila L48]
 gi|95108656|emb|CAK13350.1| thiamine biosynthesis protein ThiI [Pseudomonas entomophila L48]
          Length = 484

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 57/183 (31%), Gaps = 29/183 (15%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWKD 69
           L+L SGG DS+      + R        F+ G R      +E    + KK          
Sbjct: 183 LVLMSGGFDSTVAAYQMMRRGLMTHFCFFNLGGRAHELGVMEVAHFLWKKYGSSQRVLFI 242

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           S+  + ++                   +I +    +        + L  AA +A RL I 
Sbjct: 243 SVPFEEVV------------------GEILNKVDNSYMGVTLKRMMLRAAARMADRLEID 284

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G   +  S         I +    +         V  PL+   K +    A +IG 
Sbjct: 285 ALVTGEAISQVSSQTLPNLSIIDSATEKL---------VLRPLLASHKQDIIDQATEIGT 335

Query: 190 QDL 192
            D 
Sbjct: 336 ADF 338


>gi|94498089|ref|ZP_01304652.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sphingomonas sp. SKA58]
 gi|94422524|gb|EAT07562.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sphingomonas sp. SKA58]
          Length = 368

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 51/195 (26%), Gaps = 9/195 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELM 64
           +     ++  SGG DSS   + A      V  ++   Y     V      C  + I +  
Sbjct: 11  RDQRRIVVAMSGGVDSSVVAALAAKTGAEVIGVTLQLYDHGAAVGRTGSCCAGQDIRDAR 70

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     ++            S+  + A +      P   V     +       +A 
Sbjct: 71  AVADRIGIAHYVFD---YESRFRDSVIADFADEYMAGRTPIPCVKCNMGVKFTDLFQIAR 127

Query: 125 RLGITNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            LG   +     V  V     +                          +  PL  L K +
Sbjct: 128 DLGADCLATGHYVRRVEGAAGAELHRAADPARDQSYFLFATTQAQLDYLRFPLGGLPKSQ 187

Query: 180 TWKLAQDIGGQDLVN 194
             ++A ++G    + 
Sbjct: 188 VREIAAELGLSVALK 202


>gi|293402102|ref|ZP_06646241.1| GMP synthase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291304494|gb|EFE45744.1| GMP synthase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 437

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 58/186 (31%), Gaps = 20/186 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K    LL  SGG DSS   +  +     ++  +  ++G   K E E  + V K  ++   
Sbjct: 141 KDKKVLLALSGGVDSSVVAALLIKAIGKQLVCVHVNHGLMRKGESESVVEVFKNQLDANL 200

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            + D+           LG + + +  +     I    +       R +            
Sbjct: 201 IYADA-------SERFLGKLENVADPEKKRKIIGTEFIRVFEEEARKL------------ 241

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            GI  +  G    D           +++      L  +    +  PL  L K E      
Sbjct: 242 EGIDYLAQGTIYPDIVESGTKTAKMVKSHHNVGGLPEDLGFALVEPLRQLFKDEVRACGL 301

Query: 186 DIGGQD 191
           ++G  D
Sbjct: 302 ELGLPD 307


>gi|322834063|ref|YP_004214090.1| thiamine biosynthesis/tRNA modification protein ThiI [Rahnella sp.
           Y9602]
 gi|321169264|gb|ADW74963.1| thiamine biosynthesis/tRNA modification protein ThiI [Rahnella sp.
           Y9602]
          Length = 482

 Score = 60.7 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 58/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVKQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +              + V  +I +             + +  A+++A R G+  
Sbjct: 231 FGSSHRVRFIA-------VDFEPVVGEILEKVEDGQMGVVLKRMMVRAASSIAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K    K+A++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISHDKEHIIKIAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|210622568|ref|ZP_03293250.1| hypothetical protein CLOHIR_01198 [Clostridium hiranonis DSM 13275]
 gi|210154151|gb|EEA85157.1| hypothetical protein CLOHIR_01198 [Clostridium hiranonis DSM 13275]
          Length = 357

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 51/189 (26%), Gaps = 12/189 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                +L  SGG DSS       ++   V  ++      N  E +        I +    
Sbjct: 1   MKKKVMLGMSGGVDSSVAAYLLKEQGYDVIGVNMMLSNDNTEEEKRMTE--DSIRDARRV 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +      H+L            +  +   +  +   PN  +     I       +A + 
Sbjct: 59  AEKLDIPLHVLD---FRREFKEKVIDDFIKEYAEGRTPNPCIVCNKFIKFGLFFDVAEKF 115

Query: 127 GITNIVIGVCETDYSGYPDCR-------HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           G   +  G            R                  N+  E    +  P+   +K  
Sbjct: 116 GCDYVATGHYARVERDEKTGRLVLKKGESAKKDQTYNLYNIKQEQLERILLPIGNYEKDT 175

Query: 180 TWKLAQDIG 188
             ++A+ IG
Sbjct: 176 VREIAKKIG 184


>gi|257063219|ref|YP_003142891.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Slackia heliotrinireducens DSM 20476]
 gi|256790872|gb|ACV21542.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Slackia heliotrinireducens DSM 20476]
          Length = 353

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 52/189 (27%), Gaps = 10/189 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
                L+  SGG DSS      L +   V   + + Y        + R      + +   
Sbjct: 1   MVQRVLVGMSGGVDSSVTAYLLLRQGYEVVGATMNLYDPGRLGVPDVRDGESNDLEDARS 60

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    H+L     G    +++ +  A    D   PN  +     +        A  
Sbjct: 61  VANRLGIAHHVLD---FGCEFENNVVRPFAQAYADGLTPNPCIACNRHLKFGLMLKAARE 117

Query: 126 LGITNIVIGVCETDYSGYPDCRHDT---IRAIETAINLGMESHVTVHTPLMWL---KKYE 179
           LG   I  G                     A + A  L   +   +   ++ L    K +
Sbjct: 118 LGCDGIATGHYARIAQRLDGRFVLMKGLDDAKDQAYVLYHMTQDQLAHTVLPLGEYTKQQ 177

Query: 180 TWKLAQDIG 188
              +A + G
Sbjct: 178 VRAIAAEQG 186


>gi|189030688|sp|Q4A5Q7|THII_MYCS5 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|144575142|gb|AAZ43914.2| thiamine biosynthesis protein [Mycoplasma synoviae 53]
          Length = 376

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 52/188 (27%), Gaps = 25/188 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   L L SGG DS       + R  +V+ L+F          +       KI  L    
Sbjct: 164 SGKVLHLISGGFDSPVAAYLLMKRGFKVDFLTF------VTPPQTDETTIDKIKNLTKVL 217

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                E ++                +  ++  +       +  R+   +         + 
Sbjct: 218 SRYQKESNLYVCDF--------SLISSYIEFTEFKSFKIILMRRSFYRIASELAKQNEI- 268

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                        S   +      +  E+   +G      +  PL+   K E   L++ I
Sbjct: 269 ----------LMISNGENLAQVASQTNESMAVIGSSIKNEILRPLLTYDKNEIINLSKVI 318

Query: 188 GGQDLVNL 195
              D+  L
Sbjct: 319 ETHDISIL 326


>gi|71894517|ref|YP_278625.1| thiamine biosynthesis protein [Mycoplasma synoviae 53]
          Length = 380

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 52/188 (27%), Gaps = 25/188 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   L L SGG DS       + R  +V+ L+F          +       KI  L    
Sbjct: 168 SGKVLHLISGGFDSPVAAYLLMKRGFKVDFLTF------VTPPQTDETTIDKIKNLTKVL 221

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                E ++                +  ++  +       +  R+   +         + 
Sbjct: 222 SRYQKESNLYVCDF--------SLISSYIEFTEFKSFKIILMRRSFYRIASELAKQNEI- 272

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                        S   +      +  E+   +G      +  PL+   K E   L++ I
Sbjct: 273 ----------LMISNGENLAQVASQTNESMAVIGSSIKNEILRPLLTYDKNEIINLSKVI 322

Query: 188 GGQDLVNL 195
              D+  L
Sbjct: 323 ETHDISIL 330


>gi|49475921|ref|YP_033962.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bartonella henselae str. Houston-1]
 gi|81647713|sp|Q6G2J9|MNMA_BARHE RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|49238729|emb|CAF27985.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bartonella henselae str. Houston-1]
          Length = 409

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/188 (10%), Positives = 45/188 (23%), Gaps = 9/188 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
           +    ++  SGG DSS            V  ++   Y            C  + I +   
Sbjct: 13  ENSRIVVAMSGGVDSSVVAGLLKKEGYDVIGITLQLYDHGAATHRVGACCAGQDIEDARC 72

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +      ++L      +    ++    A        P   +     +        A  
Sbjct: 73  VAETLGIPHYVLD---YEERFREAVIDPFAASYAHGETPVPCIACNQTVKFADLLATARE 129

Query: 126 LGITNI---VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYET 180
           L    +         +  +     R       ++            +       L K   
Sbjct: 130 LDADALATGHYIRSRSHGAHRALFRPLDSDRDQSYFLFATTQEQIDYLRFPLGDLPKARV 189

Query: 181 WKLAQDIG 188
            ++A ++G
Sbjct: 190 REMATEMG 197


>gi|194429520|ref|ZP_03062041.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli B171]
 gi|194412394|gb|EDX28695.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli B171]
 gi|323163677|gb|EFZ49499.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli E128010]
          Length = 368

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TATADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 177 QVRKIAEDLG 186


>gi|332306349|ref|YP_004434200.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332173678|gb|AEE22932.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 377

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 52/188 (27%), Gaps = 9/188 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS      L +  +VE L     + +  +  C     + + +   
Sbjct: 15  NSQKKVIVGMSGGVDSSVSAYILLQQGYQVEGLFMKNWEEDDNDEYCA--AAEDLKDAQA 72

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  E H +      +   +     +             +  + I F  F    A  
Sbjct: 73  VADKLGIELHQIN--FAAEYWDNVFEYFLEEYKSGRTPNPDIMCNKEIKFKAFLEFAAEE 130

Query: 126 LGITNIVIGVCETDYSGYPD-----CRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           L    I  G                   D          LG +       P+  ++K + 
Sbjct: 131 LEADYIATGHYVRRREVDGHWQMLRGMDDNKDQSYFLYTLGEQHVGQTLFPIGDIEKPQV 190

Query: 181 WKLAQDIG 188
            ++AQ+ G
Sbjct: 191 REIAQEQG 198


>gi|39995264|ref|NP_951215.1| argininosuccinate synthase [Geobacter sulfurreducens PCA]
 gi|47605391|sp|P61523|ASSY_GEOSL RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|39982026|gb|AAR33488.1| argininosuccinate synthase [Geobacter sulfurreducens PCA]
 gi|298504269|gb|ADI82992.1| argininosuccinate synthase [Geobacter sulfurreducens KN400]
          Length = 406

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 60/206 (29%), Gaps = 11/206 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
           M    K     +L +SGG D+S  L W  +     V   S D GQ +++       +   
Sbjct: 1   MAKAHKDVKKIVLAYSGGLDTSIILKWLKNEYGCEVIAFSADLGQGDELAPIRDKAIA-- 58

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                  + D L E+ +            +        +   ++    +  R +      
Sbjct: 59  -TGADKVYIDDLKEEFVKDFVF---PMFRANAIYEGHYLLGTSIARPLIAKRQMEIAKIE 114

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP----LMWL 175
              A   G T         + + Y      T+ A      L     +  +       + +
Sbjct: 115 GADAVSHGATGKGNDQVRFELAYYHFDPAITVVAPWREWKLNSRQALVNYARKNGIPIPV 174

Query: 176 KKYETWKLAQDIGGQDLVNLILEESH 201
            K   W   +++        ILE++ 
Sbjct: 175 TKKRPWSSDRNLLHISFEGGILEDTW 200


>gi|319900168|ref|YP_004159896.1| argininosuccinate synthase [Bacteroides helcogenes P 36-108]
 gi|319415199|gb|ADV42310.1| argininosuccinate synthase [Bacteroides helcogenes P 36-108]
          Length = 402

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 53/194 (27%), Gaps = 13/194 (6%)

Query: 4   IIKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +  K    ++ FSGG D S T +  A ++   V     + G  +  +L+       K+  
Sbjct: 1   MEAKKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSPEQLKTNEENAYKLGA 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                         + + +  +    SL   V   +  N      V    I   +  A  
Sbjct: 61  KEY-----------VTIDVTQEYYEKSLKYMVFGNVLRNGTYPISVSSERIFQALAIARY 109

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM-WLKKYETW 181
           A  +G   I  G                + A    I              + +L K+   
Sbjct: 110 ANEIGADAIAHGSTGAGNDQIRFDMTFLVMAPGVEIITLTRDMALSRQEEIDYLNKHGFA 169

Query: 182 KLAQDIGGQDLVNL 195
                +     V L
Sbjct: 170 ADFAKLKYSYNVGL 183


>gi|170719605|ref|YP_001747293.1| thiamine biosynthesis protein ThiI [Pseudomonas putida W619]
 gi|169757608|gb|ACA70924.1| thiamine biosynthesis/tRNA modification protein ThiI [Pseudomonas
           putida W619]
          Length = 484

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 57/181 (31%), Gaps = 25/181 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           L+L SGG DS+      + R        F+ G R              ++E+        
Sbjct: 183 LVLMSGGFDSTVAAYQMMRRGLMTHFCFFNLGGRAHELG---------VMEVAHYLWKKY 233

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G    +       +  S   + V  +I +    +        + L  AA +A RL I  +
Sbjct: 234 GSSQRV-------LFISVPFEEVVGEILNKVDNSYMGVTLKRMMLRGAARMADRLEIDAL 286

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V G   +  S         I +    +         V  PL+   K +    A +IG  D
Sbjct: 287 VTGEAISQVSSQTLPNLSIIDSATDKL---------VLRPLLASHKQDIIDQATEIGTAD 337

Query: 192 L 192
            
Sbjct: 338 F 338


>gi|317047158|ref|YP_004114806.1| thiamine biosynthesis/tRNA modification protein ThiI [Pantoea sp.
           At-9b]
 gi|316948775|gb|ADU68250.1| thiamine biosynthesis/tRNA modification protein ThiI [Pantoea sp.
           At-9b]
          Length = 482

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 57/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGRSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASMVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K    KLA+DIG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIIKLARDIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|242399643|ref|YP_002995068.1| Predicted ATPase of the PP-loop superfamily [Thermococcus sibiricus
           MM 739]
 gi|242266037|gb|ACS90719.1| Predicted ATPase of the PP-loop superfamily [Thermococcus sibiricus
           MM 739]
          Length = 275

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKK 59
           + +++ K   A+  FSGG+DS+  L  A +++   VE +  D+G   K  +E    + + 
Sbjct: 47  LEELMSKVDKAIAAFSGGKDSTVALYLAKEKYKVDVEAVMIDHGFMAKEAIENAKRITEH 106

Query: 60  I 60
           +
Sbjct: 107 L 107


>gi|329770388|ref|ZP_08261770.1| tRNA-specific 2-thiouridylase mnmA [Gemella sanguinis M325]
 gi|328836511|gb|EGF86171.1| tRNA-specific 2-thiouridylase mnmA [Gemella sanguinis M325]
          Length = 370

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 53/189 (28%), Gaps = 10/189 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      ++  SGG DSS       ++   V  +        + + +  +CV +K    +
Sbjct: 1   MSNGKKVVVGMSGGVDSSVTAYLLKEQGYDVIGVFMKNW---EEKDDKGVCVAEKDYADV 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            K  + L   +   +    +      T  +    +        +     I        A 
Sbjct: 58  IKVCEQLDIPY-YSINFEKEYWDKVFTYFLDEYKKGRTPNPDIMC-NKEIKFKAFLEYAE 115

Query: 125 RLGITNIVIGVCETDYSGYPDC-----RHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            LG   +  G                   +          L       +  P+  L+K +
Sbjct: 116 DLGADYVATGHYARVKDENGQRLLLRGVDNNKDQTYFLSQLKQHQIKNILFPVGELEKKD 175

Query: 180 TWKLAQDIG 188
             ++A++ G
Sbjct: 176 VRRIAEEAG 184


>gi|300023996|ref|YP_003756607.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525817|gb|ADJ24286.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Hyphomicrobium denitrificans ATCC 51888]
          Length = 397

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 36/140 (25%), Gaps = 4/140 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELM 64
                 ++  SGG DSS   +        V  ++   Y   +    +   C  + I +  
Sbjct: 12  SAKKRVVVAMSGGVDSSVAAAIMKAAGHDVIGVTLQLYDHGSATGRKGSCCAGQDIHDAR 71

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     ++L            + ++ A        P   V   N I        A 
Sbjct: 72  RVADALGIPHYVLD---YEARFAQKVIESFAESYVHGETPIPCVTCNNEIKFRDLLETAK 128

Query: 125 RLGITNIVIGVCETDYSGYP 144
            LG   +V G          
Sbjct: 129 DLGAEVLVTGHYVQRRDTEH 148


>gi|238754412|ref|ZP_04615768.1| tRNA-specific 2-thiouridylase mnmA [Yersinia ruckeri ATCC 29473]
 gi|238707445|gb|EEP99806.1| tRNA-specific 2-thiouridylase mnmA [Yersinia ruckeri ATCC 29473]
          Length = 371

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 53/192 (27%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +V  L     + +  E  C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYQVAGLFMKNWEEDDNEEYCS--AATDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +             +  + I F  F  
Sbjct: 57  ADAQAVCDKLGMELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G     +      +                 LG +       P+  L
Sbjct: 115 FAAEDLGADYIATGHYVRRHDVNGKSQLLRGLDSNKDQSYFLYTLGHDQLAQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K E  ++A+ +
Sbjct: 175 EKPEVRRIAETL 186


>gi|288573314|ref|ZP_06391671.1| argininosuccinate synthase [Dethiosulfovibrio peptidovorans DSM
          11002]
 gi|288569055|gb|EFC90612.1| argininosuccinate synthase [Dethiosulfovibrio peptidovorans DSM
          11002]
          Length = 411

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 5/74 (6%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-----CVRK 58
          +++K    +L +SGG D+S  + W ++R   V TL+ D GQ   +E +         V  
Sbjct: 1  MMEKKGKVVLAYSGGLDTSVAVCWLMERGYDVVTLTADVGQSVNLEEKKAKSLQTGAVAA 60

Query: 59 KIVELMPKWKDSLG 72
           +++L  ++     
Sbjct: 61 YVMDLKKQFVQEFV 74


>gi|238783798|ref|ZP_04627817.1| tRNA-specific 2-thiouridylase mnmA [Yersinia bercovieri ATCC 43970]
 gi|238715349|gb|EEQ07342.1| tRNA-specific 2-thiouridylase mnmA [Yersinia bercovieri ATCC 43970]
          Length = 373

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 52/192 (27%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +V  L     + +  E  C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYQVAGLFMKNWEEDDGEEYCS--AATDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +A            +  + I F  F  
Sbjct: 57  ADAQAVCDKLGMELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G            R                 L  E       P+  L
Sbjct: 115 FAAEDLGADYIATGHYVRRQDVNGKSRLLRGLDGNKDQSYFLYTLSHEQLAQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K E  ++A+ +
Sbjct: 175 EKPEVRRIAEQL 186


>gi|317491853|ref|ZP_07950288.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920287|gb|EFV41611.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 367

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 52/192 (27%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +V  L     + +  E  C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYQVAGLFMKNWEEDDNEEYCS--AATDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +A            +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G            +                 L  E       P+  L
Sbjct: 115 FAAEDLGADYIATGHYVRRRDIDGTTQLLRGVDTNKDQSYFLYTLSHEQVAQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K E  K+A+ +
Sbjct: 175 EKPEVRKIAEQL 186


>gi|229828822|ref|ZP_04454891.1| hypothetical protein GCWU000342_00905 [Shuttleworthia satelles DSM
           14600]
 gi|229791985|gb|EEP28099.1| hypothetical protein GCWU000342_00905 [Shuttleworthia satelles DSM
           14600]
          Length = 361

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 57/214 (26%), Gaps = 8/214 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV---ELECRLCVRKKIV 61
           + +  + ++  SGG DSS       +   RV  ++    Q       E     C    + 
Sbjct: 1   MSEVKTVVVGMSGGVDSSVAAYLLKEEGYRVIGVTMQIWQDESACSLEEHGGCCGLSAVE 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +     +      +++               +  ++ +  N             L+  + 
Sbjct: 61  DARRVARMIGIPHYVMNFKAEFQDRVIDYFTDEYLRGRTPNPCIACNRYVKWESLLERSL 120

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM---WLKKY 178
                 I        E   +G    R+    A +    L   +   +   LM      K 
Sbjct: 121 AIGADYIATGHYARVEHLANGRYAVRNSVTAAKDQTYALYNLTQEQLAHTLMPVGDYDKP 180

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRY 212
              ++A   G         E+   C++   D   
Sbjct: 181 RIREIALAAGLPVAHKADSEDI--CFIPDHDYAS 212


>gi|227499561|ref|ZP_03929668.1| thiamine biosynthesis protein [Anaerococcus tetradius ATCC 35098]
 gi|227218320|gb|EEI83574.1| thiamine biosynthesis protein [Anaerococcus tetradius ATCC 35098]
          Length = 387

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/181 (10%), Positives = 49/181 (27%), Gaps = 25/181 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS         R   +  + F                 +K ++L        G+  +  
Sbjct: 187 IDSPVAGYLMAKRGMNINAIHFH------SYPFTSKRAHQKAMDLAKILSAYTGKMTV-- 238

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
                   +S     +   I  N              +  A  ++ +     ++ G    
Sbjct: 239 --------YSVNLAEIYKAISKNCPRRETTILSRRFMMRIANKISEKYEYQALITGESLG 290

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
             +          + IE+   +   S + +  PL+ + K +  ++ + I   +      +
Sbjct: 291 QVAS---------QTIESVSVINESSSLPILRPLIAMDKKDIIEICEKIEAYEKAIEPFD 341

Query: 199 E 199
           +
Sbjct: 342 D 342


>gi|195952878|ref|YP_002121168.1| ExsB family protein [Hydrogenobaculum sp. Y04AAS1]
 gi|195932490|gb|ACG57190.1| ExsB family protein [Hydrogenobaculum sp. Y04AAS1]
          Length = 196

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 72/217 (33%), Gaps = 28/217 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L S G DS + L++ +++   +  +    G +            K + +++     
Sbjct: 2   KVVSLVSSGFDSISLLNYYINKNYEIYPIYVKSGFK------WEEEELKHLKDIIDHISK 55

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           S      L ++   +       +   +  +D       +P RN+  L+ A   AY +   
Sbjct: 56  SYKLIKPLKVSHAPNDFFEDFNERAFINDEDVE-----IPFRNLDLLISALKYAYAVDAN 110

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I IG+       + D  ++ I+ I       M     V TP + + K + +        
Sbjct: 111 LIAIGIMGLVA--FKDNSYNFIKTINDLF--SMYGDYKVDTPFLGMSKKDVFDRY----- 161

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYL 226
              +  + +++  C           G  C  C  C  
Sbjct: 162 --FIKELFDKAFCCMNPTD------GKECGVCSKCKE 190


>gi|251789549|ref|YP_003004270.1| tRNA-specific 2-thiouridylase MnmA [Dickeya zeae Ech1591]
 gi|247538170|gb|ACT06791.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Dickeya zeae Ech1591]
          Length = 372

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 51/192 (26%), Gaps = 9/192 (4%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+         ++  SGG DSS        +  +VE L     + +     C       +
Sbjct: 1   MSMSDNSQKKVIVGMSGGVDSSVSAYLLQQQGYQVEGLFMKNWEEDDDTEYCS--AATDL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +A            +  + I F  F  
Sbjct: 59  ADAQAVCDKLGIELHTVN--FAAEYWDNVFEHFLAEYRAGRTPNPDILCNKEIKFKAFLE 116

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G     +                        L  +       P+  L
Sbjct: 117 FAAEDLGADYIATGHYVRRHDIDGKSHLLRGLDGNKDQSYFLYTLSHQQLAQSLFPVGEL 176

Query: 176 KKYETWKLAQDI 187
           +K +  K+A+ +
Sbjct: 177 EKPQVRKIAEQL 188


>gi|186685498|ref|YP_001868694.1| tRNA-specific 2-thiouridylase MnmA [Nostoc punctiforme PCC 73102]
 gi|205816898|sp|B2J5L9|MNMA_NOSP7 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|186467950|gb|ACC83751.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Nostoc punctiforme PCC 73102]
          Length = 351

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 54/187 (28%), Gaps = 15/187 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSST  +    +   V  L+        +      C  + +++     +
Sbjct: 2   KKVVVGLSGGVDSSTAAAILHHQGYEVIGLTL------WLMKGKGQCCSEGMIDAADLCE 55

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                  I+ +  L                      +          +V  A     LG 
Sbjct: 56  QLGVPHQIVDIRDLFQTHIVDYLVTGYSAGITPLPCSQCNKTVKFGPMVQYAR--EELGC 113

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-------VTVHTPLMWLKKYETW 181
             I  G            R+  +RAI+   +     +            PL  L+K +T 
Sbjct: 114 DRIATGHYARISYDEATGRYQLLRAIDRNKDQSYFLYDLSQDLLAATIFPLGELEKTDTR 173

Query: 182 KLAQDIG 188
           ++A + G
Sbjct: 174 RIATEYG 180


>gi|325831399|ref|ZP_08164653.1| thiamine biosynthesis/tRNA modification protein ThiI [Eggerthella
           sp. HGA1]
 gi|325486653|gb|EGC89101.1| thiamine biosynthesis/tRNA modification protein ThiI [Eggerthella
           sp. HGA1]
          Length = 405

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/189 (11%), Positives = 47/189 (24%), Gaps = 25/189 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            + L S G DS         R      + F          +        + ++    + +
Sbjct: 185 VVSLLSSGIDSPVATWKLARRGAVCIGVHF------SGRPQTSDASEYLVDDIAQVLERT 238

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +         +LT    +           +  R +  +        R G   
Sbjct: 239 GCIARVYAVPFGDYQREIALTVPPEL--------RVIMYRRLMFKVAEEIARRERAGA-- 288

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      +           A            + V  PL+   K E    A+ +G  
Sbjct: 289 LVTGESLGQVASQTLDNIRCTDAA---------VDLPVFRPLIGTDKLEIIAEAERLGSF 339

Query: 191 DLVNLILEE 199
           ++ +    +
Sbjct: 340 EISSQDAPD 348


>gi|319957080|ref|YP_004168343.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Nitratifractor salsuginis DSM 16511]
 gi|319419484|gb|ADV46594.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Nitratifractor salsuginis DSM 16511]
          Length = 340

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 47/184 (25%), Gaps = 17/184 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIVELM 64
               L+  SGG DS+            V  +     D    ++        V + +    
Sbjct: 3   EKKVLVGMSGGVDSTVAALLLQKEGYEVVGVYMKLHDNEAYHRENYAKARRVGEYLG--- 59

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                   E H L ++  GD         V             V  R  I        A 
Sbjct: 60  -------VEVHFLDIS--GDFRQEVYDYFVEEYRTGRTPNPCVVCNRQ-IKFGRMLEFAD 109

Query: 125 RLGITNIVIGVC-ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            LGI  +  G    +D       R  +         +  E    +  PL    K E    
Sbjct: 110 SLGIEKVATGHYVRSDGRYIYMARDRSKDQSYFLAQVRKEVIPRLLFPLGEWLKEEVKAY 169

Query: 184 AQDI 187
           A +I
Sbjct: 170 AAEI 173


>gi|257791409|ref|YP_003182015.1| thiamine biosynthesis/tRNA modification protein ThiI [Eggerthella
           lenta DSM 2243]
 gi|257475306|gb|ACV55626.1| thiamine biosynthesis/tRNA modification protein ThiI [Eggerthella
           lenta DSM 2243]
          Length = 405

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/189 (11%), Positives = 47/189 (24%), Gaps = 25/189 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            + L S G DS         R      + F          +        + ++    + +
Sbjct: 185 VVSLLSSGIDSPVATWKLARRGAVCIGVHF------SGRPQTSDASEYLVDDIAQVLERT 238

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +         +LT    +           +  R +  +        R G   
Sbjct: 239 GCIARVYAVPFGDYQREIALTVPPEL--------RVIMYRRLMFKVAEEIARRERAGA-- 288

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      +           A            + V  PL+   K E    A+ +G  
Sbjct: 289 LVTGESLGQVASQTLDNIRCTDAA---------VDLPVFRPLIGTDKLEIIAEAERLGSF 339

Query: 191 DLVNLILEE 199
           ++ +    +
Sbjct: 340 EISSQDAPD 348


>gi|238897773|ref|YP_002923452.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
 gi|229465530|gb|ACQ67304.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
          Length = 364

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 59/192 (30%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M++  K +   ++  SGG DSS      L++  +V  L     + +  EL C       +
Sbjct: 1   MSN--KNSKKVVVGMSGGVDSSVAAYLLLEQGYQVCGLFMKNWEEDDNELYCA--AAVDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +  +   +  +   T  +A            +  + I F  F  
Sbjct: 57  SDTQAVCDKLNIELHTVNFS--AEYWNQVFTLFLAEYRAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
                LG   I  G      S            +          +G +       P+  L
Sbjct: 115 FALQDLGADYIATGHYVRHQSNNGQHFLLRGIDENKDQSYFLYTIGQQQLANCLFPIGGL 174

Query: 176 KKYETWKLAQDI 187
           KK E   +A+ +
Sbjct: 175 KKSEVRDIAKKL 186


>gi|238789081|ref|ZP_04632870.1| tRNA-specific 2-thiouridylase mnmA [Yersinia frederiksenii ATCC
           33641]
 gi|238722845|gb|EEQ14496.1| tRNA-specific 2-thiouridylase mnmA [Yersinia frederiksenii ATCC
           33641]
          Length = 373

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 51/192 (26%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +V  L     + +  E  C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYQVAGLFMKNWEEDDDEEYCS--AATDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +             +  + I F  F  
Sbjct: 57  ADAQAVCDKLGMELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G            R                 L  E       P+  L
Sbjct: 115 FAAEDLGADYIATGHYVRRQDVDGKSRLLRGLDGNKDQSYFLYTLSHEQLAQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K E  ++A+ +
Sbjct: 175 EKPEVRRIAEQL 186


>gi|158338655|ref|YP_001519832.1| tRNA-specific 2-thiouridylase MnmA [Acaryochloris marina MBIC11017]
 gi|205810972|sp|B0CE39|MNMA_ACAM1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|158308896|gb|ABW30513.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acaryochloris marina MBIC11017]
          Length = 355

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 53/186 (28%), Gaps = 15/186 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS   +   ++   V  L+        +      C    +V+     +
Sbjct: 2   KKVVVGLSGGVDSSVAAASLKEKGYEVIGLTL------WLMQGKGQCCSDGLVDAAQLCE 55

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D     H++    L   +          +       +          ++  A     L  
Sbjct: 56  DLDIPHHVVDSRDLFSNNIIDYLVEGYQQGITPLPCSQCNKTVKFGPMLNYARH--ELDT 113

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH-------TPLMWLKKYETW 181
             I  G          + R+  +RA++   +     +            PL    K ET 
Sbjct: 114 DTIATGHYARIAYSEKEKRYQLLRAVDRNKDQSYFLYDLDQDLLSGTVFPLGDHTKTETR 173

Query: 182 KLAQDI 187
           ++A  +
Sbjct: 174 RMATQL 179


>gi|114798727|ref|YP_759370.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Hyphomonas neptunium ATCC 15444]
 gi|123323559|sp|Q0C4H3|MNMA_HYPNA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|114738901|gb|ABI77026.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Hyphomonas neptunium ATCC 15444]
          Length = 394

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 48/183 (26%), Gaps = 9/183 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS   +        V  ++   Y     +E +   C  + I +      
Sbjct: 26  RVVAAMSGGVDSSVVAAMLKAEGYDVIGITLQLYDHGAAIEKKGACCAGQDIHDARNVSD 85

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L            + ++ A      + P   +     +        A  LG 
Sbjct: 86  AIGIPHYVLD---YESRFREQVMEDFADTYLSGSTPIPCIRCNQTVKFADLLATAKELGA 142

Query: 129 TNIVIGVCETDYSGY-----PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +  G       G         +  +                 +  PL  L K E  +L
Sbjct: 143 DCLATGHYIRRTDGPEGPELHRAQDASRDQSYFLFATTRAQLDFLRFPLGSLPKSEVREL 202

Query: 184 AQD 186
           A+ 
Sbjct: 203 AEK 205


>gi|296329079|ref|ZP_06871584.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium nucleatum subsp. nucleatum ATCC 23726]
 gi|296153798|gb|EFG94611.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium nucleatum subsp. nucleatum ATCC 23726]
          Length = 343

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 49/181 (27%), Gaps = 7/181 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKW 67
              ++  SGG DSS       ++   V  ++ +   + N  ++E    V  K+  +    
Sbjct: 2   KKVVIGMSGGVDSSVSAYLLKEQGYEVIGVTLNQHLEENLKDIEDAKKVCDKLGIIHEVV 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                 ++I+    L     S  T +  +   D           +     + A      G
Sbjct: 62  NIRKDFENIVIKYFLDG-YSSGKTPSPCVICDDEIKFKILFDIADKYKAEYVA-----TG 115

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
               V                           +  +    +  PL    K    ++A  I
Sbjct: 116 HYTSVEYSEVFSKYLLKSVHSIIKDQSYMLYRISPDKLERLIFPLKPYSKQGIREIALKI 175

Query: 188 G 188
           G
Sbjct: 176 G 176


>gi|226322606|ref|ZP_03798124.1| hypothetical protein COPCOM_00378 [Coprococcus comes ATCC 27758]
 gi|225208943|gb|EEG91297.1| hypothetical protein COPCOM_00378 [Coprococcus comes ATCC 27758]
          Length = 359

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/189 (10%), Positives = 49/189 (25%), Gaps = 6/189 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL---CVRKKIVELM 64
               ++  SGG DSS       ++   V  ++    Q  + +++      C    + +  
Sbjct: 3   KKKVVVGMSGGVDSSVAAYLLKEQGYDVIGVTMQIWQDEESKIQEENGGCCGLSAVDDAR 62

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL--VFAATL 122
                     +++               +  +  +  N             L        
Sbjct: 63  KVAAQIGIPYYVMNFKKDFQEKVIDYFVDEYLHGRTPNPCIACNRYVKWESLLTRSMEIG 122

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDT-IRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           A  +   +        +                    NL  +       P+   +K +  
Sbjct: 123 ADYIATGHYARVEQLPNGRYAIRHSATWSKDQTYALYNLTQDQLRRTLMPVGEYEKDQIR 182

Query: 182 KLAQDIGGQ 190
           ++A++IG Q
Sbjct: 183 EIAKEIGLQ 191


>gi|86359043|ref|YP_470935.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhizobium etli CFN 42]
 gi|123510891|sp|Q2K4M8|MNMA_RHIEC RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|86283145|gb|ABC92208.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferaseprotein
           [Rhizobium etli CFN 42]
          Length = 408

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 53/190 (27%), Gaps = 14/190 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS        +   V  ++   Y     V      C  + I +     +
Sbjct: 23  RVVVAMSGGVDSSVVAGLLKQQGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARHVCE 82

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++    A        P   V     +        A  LG 
Sbjct: 83  TLGIPHYVLD---YEKRFRETVINPFAESYVAGETPIPCVSCNQTVKFADLLATAKELGA 139

Query: 129 TNI----VIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMWLKKY 178
             +     I       S +P  R     A               E    +  PL  L K 
Sbjct: 140 DALATGHYIRSRPNPSSEHPGRRALFRPADADRDQSYFLFATTQEQIDYLRFPLGGLPKA 199

Query: 179 ETWKLAQDIG 188
           ET +LA+++G
Sbjct: 200 ETRRLAEEMG 209


>gi|224023314|ref|ZP_03641680.1| hypothetical protein BACCOPRO_00007 [Bacteroides coprophilus DSM
           18228]
 gi|224016536|gb|EEF74548.1| hypothetical protein BACCOPRO_00007 [Bacteroides coprophilus DSM
           18228]
          Length = 473

 Score = 60.3 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 63/230 (27%), Gaps = 17/230 (7%)

Query: 12  LLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           + LFSGG DS          L    ++  +S     +   +    L   ++      K+ 
Sbjct: 147 VALFSGGLDSLIGFIDEANTLSLNKKILLVSHMELGKEHSDQNSILGYCRENNIFANKYD 206

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             L    I P +     + +  T      +  +              L+        + I
Sbjct: 207 QVLLNAGIKPRSWNIKGTPTESTFRSRSLLFFSAGIYIANKISPQCKLIVPENGTISINI 266

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW-KLAQDI 187
                       S      H T         L +     +  P     K +   + +QD 
Sbjct: 267 PL----DSGRRSSCSTRTTHPTFVKRIQEALLAIGIANPICNPYRLKSKRDMVLECSQDK 322

Query: 188 GGQDLVNLILEESHTCY---------LGKRDKRYEWGYGCNSCPACYLRQ 228
             ++++N +++ S +C              +        C  C  C  R+
Sbjct: 323 TKKEILNSLVDLSCSCAKRGHNIFWDKSGTEIHDAKIKHCGMCLPCLYRR 372


>gi|237756395|ref|ZP_04584939.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691446|gb|EEP60510.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 352

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 59/183 (32%), Gaps = 7/183 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSST       +   V  +S  +   +  E++ ++C   K +    K  
Sbjct: 2   KKVVVGLSGGVDSSTAAFLLKKQGYEVVGISLKFTDIDSCEVDTQVCCSDKDILDAKKVA 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           + L   H +      DI    +        +    PN        +     A     LG 
Sbjct: 62  EFLEIPHYVI--NWKDIFEKKVINYFIEGYKSGLTPNPCSICNREVKTGLFAKYIKSLGF 119

Query: 129 TNI---VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYETWKL 183
             +        + +       R       ++     +E  V  T+  PL  L K E  K+
Sbjct: 120 DYLATGHYIRTDIEDGVKVLKRGIDKNKDQSYFMALVEREVVDTLIFPLGNLTKEEVRKI 179

Query: 184 AQD 186
           AQ+
Sbjct: 180 AQE 182


>gi|83593359|ref|YP_427111.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhodospirillum rubrum ATCC 11170]
 gi|123526416|sp|Q2RSS1|MNMA_RHORT RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|83576273|gb|ABC22824.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhodospirillum rubrum ATCC 11170]
          Length = 377

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 52/186 (27%), Gaps = 9/186 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +   ++   V  L+   Y     +    R C   + +    +  
Sbjct: 14  RVVVAMSGGVDSSVTAALLKEQGHDVVGLTMRLYDHGKPLGPGARTCCAGQDIHDARRVA 73

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D LG  H +            + +  A        P   V     +        A  LG 
Sbjct: 74  DRLGIAHYV--LDYESRFREDVIEPFAASYGRGETPIPCVLCNQTVKFRDLLAAALDLGG 131

Query: 129 TNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           T +  G       G    R          ++         +    +        K ET  
Sbjct: 132 TALATGHYVRRLDGPEGPRLYRAVDPGRDQSYFLFATTKGQLGRLLFPLGAMASKDETRA 191

Query: 183 LAQDIG 188
           +A+ +G
Sbjct: 192 IARRLG 197


>gi|302348418|ref|YP_003816056.1| Probable thiamine biosynthesis protein thiI [Acidilobus
           saccharovorans 345-15]
 gi|302328830|gb|ADL19025.1| Probable thiamine biosynthesis protein thiI [Acidilobus
           saccharovorans 345-15]
          Length = 375

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 51/181 (28%), Gaps = 27/181 (14%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L SGG DS       + R      L+   G       E R  V +++  L      
Sbjct: 167 RTVALVSGGIDSPVATWMIMKRGVVPLVLNLSIGG-----EEHRRAVLEEVRALRAWSGR 221

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              +   +                  MK          V     +    A  LA R G  
Sbjct: 222 HDIKVFFVD-------------GIPVMKGLAEVRRELRVVTLKRVLYRLAEALAIREGAH 268

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
           +I  G   +  S          + +           + V  PL+ + K E  ++A+ IG 
Sbjct: 269 SITTGESLSQVSS---------QTMWNLEAEEHGIELPVLRPLIAMDKDEIAEVARRIGT 319

Query: 190 Q 190
            
Sbjct: 320 Y 320


>gi|269114904|ref|YP_003302667.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycoplasma hominis]
 gi|268322529|emb|CAX37264.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycoplasma hominis ATCC 23114]
          Length = 370

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 52/188 (27%), Gaps = 7/188 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETL------SFDYGQRNKVELECRLCVRKKI 60
                +L  SGG DSS C      +   V  L      SF        E   +    ++ 
Sbjct: 1   MKKRVVLGMSGGVDSSVCGYLLQKQGYDVVGLFMRNWDSFLNNDILGNENITQNICPQEQ 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             L  K   S     +  +  + +   +     +    +           + I F  F+ 
Sbjct: 61  DYLDAKAVASQLNIQLYRIDFVKEYWENVFNYLIDEYKKGRTPNPDIFCNKFIKFKAFSD 120

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRH-DTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
                L    I +G       G       D          L  +    V  PL  + K E
Sbjct: 121 YAFKELKADYIAMGHYANAIDGELFRAQDDNKDQSYFLAQLSPDQLKKVIFPLANITKPE 180

Query: 180 TWKLAQDI 187
             ++A+ +
Sbjct: 181 VREIAKQL 188


>gi|224023564|ref|ZP_03641930.1| hypothetical protein BACCOPRO_00267 [Bacteroides coprophilus DSM
           18228]
 gi|224016786|gb|EEF74798.1| hypothetical protein BACCOPRO_00267 [Bacteroides coprophilus DSM
           18228]
          Length = 378

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 46/189 (24%), Gaps = 8/189 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           I K    L+  SGG DSS       ++   V  ++                   +++E  
Sbjct: 3   IHKDKRVLVGMSGGIDSSAVCIMLQEQGYEVVGVTMRTWDVPSHFSTPGQEQPDEVLEAQ 62

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                   E H+  +    +     + K    +      PN  V    +         A 
Sbjct: 63  ALAARLGIEHHVADV---REEFRQVIVKYFIDEYMRGRTPNPCVMCNPLFKERILCEWAD 119

Query: 125 RLGITNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           R     I             Y         T         L  E    +  PL  + K E
Sbjct: 120 RTDCAWIATGHYCQLEDRNGYRYILTGDDPTKDQSYFLWKLPQEILRRMIFPLGGMTKQE 179

Query: 180 TWKLAQDIG 188
                 + G
Sbjct: 180 VRAYLAEKG 188


>gi|312127260|ref|YP_003992134.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Caldicellulosiruptor hydrothermalis 108]
 gi|311777279|gb|ADQ06765.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Caldicellulosiruptor hydrothermalis 108]
          Length = 360

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 44/187 (23%), Gaps = 7/187 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL---ECRLCVRKKIVEL 63
                L+  SGG DSS   +   +    V   +    Q    E        C    + + 
Sbjct: 1   MKKKVLVAMSGGVDSSVAAAILKEEGYEVYGATMQIWQSGCGEELITGKSCCSLYAVDDA 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      ++  +             +  +K +  N            F +  A   
Sbjct: 61  RRVANILDIPYYVFNMKDDFKKMVIDYFVDEYIKGRTPNPCIMCNRKIKFEFFLKKAITI 120

Query: 124 ----YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
                  G   IV      +       +           N+  E       PL    K E
Sbjct: 121 GMDYIATGHYAIVEYDNSLNRYLLKRSKAKEKDQTYVLYNMTQEMLSKTLFPLGRFSKDE 180

Query: 180 TWKLAQD 186
             +LA+ 
Sbjct: 181 VRRLAEK 187


>gi|317490551|ref|ZP_07949027.1| thiamine biosynthesis/tRNA modification protein ThiI [Eggerthella
           sp. 1_3_56FAA]
 gi|316910331|gb|EFV31964.1| thiamine biosynthesis/tRNA modification protein ThiI [Eggerthella
           sp. 1_3_56FAA]
          Length = 405

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/189 (11%), Positives = 47/189 (24%), Gaps = 25/189 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            + L S G DS         R      + F          +        + ++    + +
Sbjct: 185 VVSLLSSGIDSPVATWKLARRGAVCIGVHF------SGRPQTSDASEYLVDDIAQVLERT 238

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +         +LT    +           +  R +  +        R G   
Sbjct: 239 GCIARVYTVPFGDYQREIALTVPPEL--------RVIMYRRLMFKVAEEIARRERAGA-- 288

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      +           A            + V  PL+   K E    A+ +G  
Sbjct: 289 LVTGESLGQVASQTLDNIRCTDAA---------VDLPVFRPLIGTDKLEIIAEAERLGSF 339

Query: 191 DLVNLILEE 199
           ++ +    +
Sbjct: 340 EISSQDAPD 348


>gi|163751230|ref|ZP_02158458.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shewanella benthica KT99]
 gi|161328944|gb|EDQ00018.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shewanella benthica KT99]
          Length = 376

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 52/188 (27%), Gaps = 9/188 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
             +   ++  SGG DSS      L +  RVE L     + +  +  C       + +   
Sbjct: 9   NSSKKVIVGMSGGVDSSVSAYLLLKQGYRVEGLFMKNWEEDDTDEYCA--AADDLKDAQA 66

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  + H +      +         +A            +  + I F  F       
Sbjct: 67  VCDKLGIKLHTVN--FAAEYWDKVFEYFLAEYKAGRTPNPDIICNKEIKFKAFLEFADEI 124

Query: 126 LGITNIVIGVCETDYSGYPDCRH-----DTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           L    I +G            R                 L  E       P+  L+K E 
Sbjct: 125 LDADYIAMGHYVRRCDETGQSRMLRGVDGNKDQSYFLYTLSHEQIARSLFPVGELEKSEV 184

Query: 181 WKLAQDIG 188
            ++A+++G
Sbjct: 185 REIAKEMG 192


>gi|225848332|ref|YP_002728495.1| tRNA-specific 2-thiouridylase MnmA [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225644575|gb|ACN99625.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 351

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/182 (12%), Positives = 52/182 (28%), Gaps = 4/182 (2%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR-KKIVELMPKW 67
              ++  SGG DSST       +  +V  ++    + ++  L+ ++C   K I++     
Sbjct: 2   KKVVVGLSGGVDSSTAAFILKQQGYQVIGITLKLSEVDQCSLDKQVCCSTKDILDAKKVA 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                  +++    +                   N  +          L   A    +  
Sbjct: 62  SFLGIPHYVIDWQDIFKEKVIDYFIREYQSGYTPNPCSICNREVKTGLLAKYAKKVLKAD 121

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLA 184
                  +      G    +     + + +  + +     +     PL    K E  K+A
Sbjct: 122 FFATGHYIKTDFLDGEKVIKRGVDTSKDQSYFMALVEKEVIDMLIFPLGDFTKEEVRKIA 181

Query: 185 QD 186
            +
Sbjct: 182 YE 183


>gi|71893779|ref|YP_279225.1| tRNA-specific 2-thiouridylase MnmA [Mycoplasma hyopneumoniae J]
 gi|123645587|sp|Q4A9Q7|MNMA_MYCHJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205822182|sp|Q600M2|MNMA_MYCH2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|71851906|gb|AAZ44514.1| tRNA-(5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Mycoplasma hyopneumoniae J]
 gi|312601389|gb|ADQ90644.1| tRNA-specific 2-thiouridylase mnmA [Mycoplasma hyopneumoniae 168]
          Length = 372

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 48/187 (25%), Gaps = 8/187 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI-------VE 62
             ++  SGG DS+            V  +       +           K           
Sbjct: 3   KIVVGLSGGVDSAVSAYLLKKAGHNVIAVFMRNWDSSLNNDFLGKKNEKNFTICPQEQDW 62

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           L  K         I  +  + +      +  +             +  +NI F  F    
Sbjct: 63  LDAKVVAKQLNIPIFRIDFIKEYWDEVFSDLILKYQSGLTPNPDILCNKNIKFKHFLDYA 122

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI-NLGMESHVTVHTPLMWLKKYETW 181
                   I +G      +G      D+++     +  L          PL  L K E  
Sbjct: 123 QKVHNADFIAMGHYAKTDNGNLYAGADSLKDQSYFLGQLSKSQLQKTIFPLGNLHKSEVR 182

Query: 182 KLAQDIG 188
           K+A ++G
Sbjct: 183 KIANELG 189


>gi|54020202|ref|YP_115943.1| tRNA-specific 2-thiouridylase MnmA [Mycoplasma hyopneumoniae 232]
 gi|53987375|gb|AAV27576.1| tRNA-(5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Mycoplasma hyopneumoniae 232]
          Length = 387

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 48/187 (25%), Gaps = 8/187 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI-------VE 62
             ++  SGG DS+            V  +       +           K           
Sbjct: 18  KIVVGLSGGVDSAVSAYLLKKAGHNVIAVFMRNWDSSLNNDFLGKKNEKNFTICPQEQDW 77

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           L  K         I  +  + +      +  +             +  +NI F  F    
Sbjct: 78  LDAKVVAKQLNIPIFRIDFIKEYWDEVFSDLILKYQSGLTPNPDILCNKNIKFKHFLDYA 137

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI-NLGMESHVTVHTPLMWLKKYETW 181
                   I +G      +G      D+++     +  L          PL  L K E  
Sbjct: 138 QKVHNADFIAMGHYAKTDNGNLYAGADSLKDQSYFLGQLSKSQLQKTIFPLGNLHKSEVR 197

Query: 182 KLAQDIG 188
           K+A ++G
Sbjct: 198 KIANELG 204


>gi|78222093|ref|YP_383840.1| tRNA-specific 2-thiouridylase MnmA [Geobacter metallireducens
           GS-15]
 gi|123572471|sp|Q39XA9|MNMA_GEOMG RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|78193348|gb|ABB31115.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Geobacter metallireducens GS-15]
          Length = 368

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 55/199 (27%), Gaps = 16/199 (8%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVR 57
           M +  K     ++  SGG DSS   +   +    V  +S    DY + +  E E      
Sbjct: 1   MTE--KARKRIVVAMSGGVDSSVTAALLKEEGHEVIGISMQVWDYSKFSAPEGEKFDTCC 58

Query: 58  --KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
               I +     +      +++      +     +  +   +      PN  V     + 
Sbjct: 59  SLDDIHDARRVAEQIGIPFYVVN---FEEEFQRLVIDDFVDEYFRGRTPNPCVRCNQRVK 115

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRH------DTIRAIETAINLGMESHVTVH 169
                  A  LG   +  G       G     H                 L  E    V 
Sbjct: 116 FELLLRKARELGADLLATGHYARIERGGDGLFHLLRGDDPGKDQSYFLFTLTQEQLARVT 175

Query: 170 TPLMWLKKYETWKLAQDIG 188
            PL  + K E  +LA   G
Sbjct: 176 FPLGGMTKPEVRQLATRFG 194


>gi|114320607|ref|YP_742290.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Alkalilimnicola ehrlichii MLHE-1]
 gi|122311715|sp|Q0A8N7|MNMA_ALHEH RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|114227001|gb|ABI56800.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Alkalilimnicola ehrlichii MLHE-1]
          Length = 366

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 48/192 (25%), Gaps = 10/192 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K    ++  SGG DS+      L+    VE L     + +     C     + + E  
Sbjct: 1   MGKTDKVVVGLSGGVDSAVAAMRLLEAGHHVEGLFMKNWEDDDTLTHCA--AEEDLAEAQ 58

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     H    A         + +    + +    PN  +     I        A 
Sbjct: 59  AVADHLGIRLHR---ANFAARYREQVFEVCLREYRAGRTPNPDILCNQRIKFRAFLDHAL 115

Query: 125 RLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            LG + +  G                              LG         PL  L K E
Sbjct: 116 SLGASKVATGHYAGVGEQGGRFTLLRGEDPHKDQSYFLYTLGQAQLRHSLFPLSELPKPE 175

Query: 180 TWKLAQDIGGQD 191
             + A   G  +
Sbjct: 176 VRRQAAAAGLPN 187


>gi|271499583|ref|YP_003332608.1| thiamine biosynthesis/tRNA modification protein ThiI [Dickeya
           dadantii Ech586]
 gi|270343138|gb|ACZ75903.1| thiamine biosynthesis/tRNA modification protein ThiI [Dickeya
           dadantii Ech586]
          Length = 482

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 57/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAI-------DFEPVVGEILEKVDDGQMGVVLKRMMVRAASRIAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K    +LA+++G +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIIRLARELGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|24373104|ref|NP_717147.1| thiamine biosynthesis protein ThiI [Shewanella oneidensis MR-1]
 gi|38372590|sp|Q8EGR4|THII_SHEON RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|24347293|gb|AAN54591.1|AE015599_3 thiamine biosynthesis protein ThiI [Shewanella oneidensis MR-1]
          Length = 484

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 61/188 (32%), Gaps = 25/188 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      L L SGG DS       + +  R     F+ G         +  +   + ++ 
Sbjct: 176 MATQEDVLSLISGGFDSGVSSYQFIKKGARTHYCFFNLGG-------AQHEI--GVKQVA 226

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                + GE H +          S   + V  +I +             + +  AA +A 
Sbjct: 227 YHLWKTFGESHKVKF-------VSVPFEPVVAEILEKIDNGQMGVVLKRMMMRTAARIAE 279

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           R+GI  IV G      S          + +     +   + + +  PL+ + K +     
Sbjct: 280 RMGIQAIVTGESLGQVSS---------QTLTNLNVIDRCTDMLILRPLITMDKQDIINEC 330

Query: 185 QDIGGQDL 192
           + IG +D 
Sbjct: 331 RRIGTEDF 338


>gi|166031729|ref|ZP_02234558.1| hypothetical protein DORFOR_01429 [Dorea formicigenerans ATCC
           27755]
 gi|166028182|gb|EDR46939.1| hypothetical protein DORFOR_01429 [Dorea formicigenerans ATCC
           27755]
          Length = 359

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 49/190 (25%), Gaps = 10/190 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL--M 64
           +    ++  SGG DSS       ++   V  ++    Q      +        +  +   
Sbjct: 2   EKKKVVVGMSGGVDSSVAAWLLKEQGYDVIGVTMQIWQDEDEFKQQEEGGCCGLSAVEDA 61

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            +    LG  + +      +     +             PN  +     +      T A 
Sbjct: 62  RRVAARLGIPYYVM--NFKNEFKKYVIDYFIDDYLHGRTPNPCIACNRYVKWESLLTRAM 119

Query: 125 RLGITNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            +G   I  G                              NL  +       P+    K 
Sbjct: 120 EIGADYIATGHYAQVEQLPSGRYSIKTSVTSMKDQTYALYNLTQDQLSKTLMPVGKYSKD 179

Query: 179 ETWKLAQDIG 188
           E  K+A++IG
Sbjct: 180 EVRKMAENIG 189


>gi|320458883|dbj|BAJ69504.1| hypothetical protein BLIJ_1925 [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 137

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 39/120 (32%), Gaps = 14/120 (11%)

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI-NLGMESHVTVHTPLMWLKK 177
            A+ A +  I ++   V   D   + +            +   G E  VT HTP + + K
Sbjct: 1   MASWALKHDIVDVYYAVHSNDAVFHDNHASYFEALHTVTVECEGDEYGVTFHTPYLSINK 60

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
               +    +G      +   ++ +C LG           C  C  C  R+  +     K
Sbjct: 61  CAVIQKGMGLG------VPFGDTWSCALGG-------TVHCGVCDPCRDRRTSFEILGIK 107


>gi|212691683|ref|ZP_03299811.1| hypothetical protein BACDOR_01178 [Bacteroides dorei DSM 17855]
 gi|237725766|ref|ZP_04556247.1| argininosuccinate synthase [Bacteroides sp. D4]
 gi|212665872|gb|EEB26444.1| hypothetical protein BACDOR_01178 [Bacteroides dorei DSM 17855]
 gi|229435574|gb|EEO45651.1| argininosuccinate synthase [Bacteroides dorei 5_1_36/D4]
          Length = 402

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 12/135 (8%)

Query: 4   IIKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +K    ++ FSGG D S T +  A ++   V     + G  ++ +L+       K+  
Sbjct: 1   MEEKKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSEEQLKQNEENAYKLGA 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +             + L +  +    SL   V   +  N      V    I   +  A  
Sbjct: 61  V-----------KYVTLDVTQEYYEKSLKYMVFGNVLRNGTYPISVSSERIFQGLAIARY 109

Query: 123 AYRLGITNIVIGVCE 137
           A  +G   I  G   
Sbjct: 110 ANEIGADAIAHGSTG 124


>gi|291550046|emb|CBL26308.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ruminococcus torques L2-14]
          Length = 358

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 58/191 (30%), Gaps = 10/191 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL--MP 65
               ++  SGG DSS       ++   V  ++    Q  + E++        +  +    
Sbjct: 3   KGKVVVGMSGGVDSSVAAWLLKEQGYDVIGVTMQIWQDEENEVQEENGGCCGLSAVDDAR 62

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +   S+G  + +           ++      +  +   PN  +     +        +  
Sbjct: 63  RVASSIGIPYYVM--NFKQEFQKNVIDYFTKEYLNGRTPNPCIACNRYVKWEALLQRSLS 120

Query: 126 LGITNIVIGVCETD---YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM---WLKKYE 179
           +G   I  G         +G    R     A +    L   +   +   LM      K +
Sbjct: 121 IGADYIATGHYARIDKLSNGRYAIRRSATLAKDQTYALYNLTQEQLEHTLMPVGNYSKDQ 180

Query: 180 TWKLAQDIGGQ 190
             ++A+ IG Q
Sbjct: 181 IREMAEKIGLQ 191


>gi|254780151|ref|YP_003064564.1| tRNA-specific 2-thiouridylase MnmA [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254039828|gb|ACT56624.1| tRNA-specific 2-thiouridylase MnmA [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|255957544|dbj|BAH96607.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Candidatus Liberibacter asiaticus]
 gi|255957840|dbj|BAH96814.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Candidatus Liberibacter asiaticus]
 gi|255957850|dbj|BAH96823.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Candidatus Liberibacter asiaticus]
 gi|255957860|dbj|BAH96832.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Candidatus Liberibacter asiaticus]
 gi|255957870|dbj|BAH96841.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Candidatus Liberibacter asiaticus]
 gi|255957880|dbj|BAH96850.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Candidatus Liberibacter asiaticus]
 gi|255957890|dbj|BAH96859.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Candidatus Liberibacter asiaticus]
 gi|255957900|dbj|BAH96868.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Candidatus Liberibacter asiaticus]
 gi|255957910|dbj|BAH96877.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Candidatus Liberibacter asiaticus]
 gi|255957920|dbj|BAH96886.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Candidatus Liberibacter asiaticus]
 gi|255957930|dbj|BAH96895.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Candidatus Liberibacter asiaticus]
 gi|255957940|dbj|BAH96904.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Candidatus Liberibacter asiaticus]
 gi|255957950|dbj|BAH96913.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Candidatus Liberibacter asiaticus]
 gi|255957960|dbj|BAH96922.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Candidatus Liberibacter asiaticus]
 gi|255957970|dbj|BAH96931.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Candidatus Liberibacter asiaticus]
 gi|255957980|dbj|BAH96940.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Candidatus Liberibacter asiaticus]
 gi|255957990|dbj|BAH96949.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Candidatus Liberibacter asiaticus]
 gi|255958000|dbj|BAH96958.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Candidatus Liberibacter asiaticus]
 gi|255958010|dbj|BAH96967.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Candidatus Liberibacter asiaticus]
 gi|255958020|dbj|BAH96976.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Candidatus Liberibacter asiaticus]
 gi|255958030|dbj|BAH96985.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Candidatus Liberibacter asiaticus]
 gi|255958040|dbj|BAH96994.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Candidatus Liberibacter asiaticus]
 gi|255958050|dbj|BAH97003.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Candidatus Liberibacter asiaticus]
 gi|255958060|dbj|BAH97012.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Candidatus Liberibacter asiaticus]
 gi|255958070|dbj|BAH97021.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Candidatus Liberibacter asiaticus]
 gi|255958080|dbj|BAH97030.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Candidatus Liberibacter asiaticus]
 gi|255958090|dbj|BAH97039.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Candidatus Liberibacter asiaticus]
 gi|255958100|dbj|BAH97048.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Candidatus Liberibacter asiaticus]
 gi|255958110|dbj|BAH97057.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Candidatus Liberibacter asiaticus]
 gi|255958120|dbj|BAH97066.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Candidatus Liberibacter asiaticus]
 gi|283362130|dbj|BAI65917.1| predicted tRNA (5-methylaminomethyl-2-thiouridylate)
           methyltransferase [Candidatus Liberibacter asiaticus]
 gi|283362140|dbj|BAI65926.1| predicted tRNA(5-methylaminomethyl-2-thiouridylate) [Candidatus
           Liberibacter asiaticus]
 gi|283362150|dbj|BAI65935.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate) [Candidatus
           Liberibacter asiaticus]
 gi|283362160|dbj|BAI65944.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate) [Candidatus
           Liberibacter asiaticus]
 gi|283362170|dbj|BAI65953.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate) [Candidatus
           Liberibacter asiaticus]
 gi|283362180|dbj|BAI65962.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate) [Candidatus
           Liberibacter asiaticus]
 gi|283362190|dbj|BAI65971.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate) [Candidatus
           Liberibacter asiaticus]
 gi|283362200|dbj|BAI65980.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate) [Candidatus
           Liberibacter asiaticus]
 gi|283362210|dbj|BAI65989.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate) [Candidatus
           Liberibacter asiaticus]
 gi|283362220|dbj|BAI65998.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate) [Candidatus
           Liberibacter asiaticus]
 gi|283362230|dbj|BAI66007.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate) [Candidatus
           Liberibacter asiaticus]
          Length = 408

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 58/199 (29%), Gaps = 16/199 (8%)

Query: 3   DIIKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKK 59
           D+ K       ++  SGG DSS   +        V  ++   Y  R   + +   C  + 
Sbjct: 13  DLDKNPKDMRVVVAMSGGVDSSVVAALLKRDGYDVIGVTLQLYNSRKASKRKGSCCAGQD 72

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           + +            ++       +   +++    A        P   V     +     
Sbjct: 73  VYDARRVCDTINVSHYVFD---YEERFRNAVIVPFASSYAAGETPLPCVDCNRTVKFSDL 129

Query: 120 ATLAYRLGITNIVIGVCETDY--------SGYPDCRHDTIRAIETAINLG--MESHVTVH 169
            ++  +LG   +  G                   CR   +   ++        +    + 
Sbjct: 130 LSVTRQLGADVLATGHYIRSRLYVGDDGKRRRIMCRPMDLERDQSYFLFATTQQQLCDLR 189

Query: 170 TPLMWLKKYETWKLAQDIG 188
            PL  +KK     LA+++G
Sbjct: 190 FPLGDMKKESVRDLAREMG 208


>gi|153950153|ref|YP_001400589.1| tRNA-specific 2-thiouridylase MnmA [Yersinia pseudotuberculosis IP
           31758]
 gi|205828987|sp|A7FH61|MNMA_YERP3 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|152961648|gb|ABS49109.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pseudotuberculosis IP 31758]
          Length = 371

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 52/192 (27%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +V  L     + +  E  C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYQVAGLFMKNWEEDDDEEYCS--AATDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +A            +  + I F  F  
Sbjct: 57  ADAQAVCDKLGMELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G            R                 L  E       P+  L
Sbjct: 115 FAAEDLGADYIATGHYVRRQDVDGKSRLLRGLDGNKDQSYFLYTLSHEQIAQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K E  ++A+ +
Sbjct: 175 EKPEVRRIAEQL 186


>gi|22125693|ref|NP_669116.1| tRNA-specific 2-thiouridylase MnmA [Yersinia pestis KIM 10]
 gi|45441579|ref|NP_993118.1| tRNA-specific 2-thiouridylase MnmA [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51596752|ref|YP_070943.1| tRNA-specific 2-thiouridylase MnmA [Yersinia pseudotuberculosis IP
           32953]
 gi|108807881|ref|YP_651797.1| tRNA-specific 2-thiouridylase MnmA [Yersinia pestis Antiqua]
 gi|108812155|ref|YP_647922.1| tRNA-specific 2-thiouridylase MnmA [Yersinia pestis Nepal516]
 gi|145599092|ref|YP_001163168.1| tRNA-specific 2-thiouridylase MnmA [Yersinia pestis Pestoides F]
 gi|149366398|ref|ZP_01888432.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis CA88-4125]
 gi|162421419|ref|YP_001607233.1| tRNA-specific 2-thiouridylase MnmA [Yersinia pestis Angola]
 gi|165925423|ref|ZP_02221255.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165938528|ref|ZP_02227085.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|166008070|ref|ZP_02228968.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166211105|ref|ZP_02237140.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167401703|ref|ZP_02307194.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167421866|ref|ZP_02313619.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167426312|ref|ZP_02318065.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|167470788|ref|ZP_02335492.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis FV-1]
 gi|170023961|ref|YP_001720466.1| tRNA-specific 2-thiouridylase MnmA [Yersinia pseudotuberculosis
           YPIII]
 gi|186895819|ref|YP_001872931.1| tRNA-specific 2-thiouridylase MnmA [Yersinia pseudotuberculosis
           PB1/+]
 gi|218928774|ref|YP_002346649.1| tRNA-specific 2-thiouridylase MnmA [Yersinia pestis CO92]
 gi|229841625|ref|ZP_04461783.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229843742|ref|ZP_04463885.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis biovar Orientalis str. India 195]
 gi|229894486|ref|ZP_04509668.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis Pestoides A]
 gi|229902476|ref|ZP_04517595.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis Nepal516]
 gi|270490345|ref|ZP_06207419.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis KIM D27]
 gi|294504164|ref|YP_003568226.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis Z176003]
 gi|24638321|sp|Q8ZFQ5|MNMA_YERPE RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|73920130|sp|Q669Q4|MNMA_YERPS RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|122980130|sp|Q1CI58|MNMA_YERPN RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|123245748|sp|Q1C6S0|MNMA_YERPA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205828988|sp|B2K711|MNMA_YERPB RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205828989|sp|A9R0L5|MNMA_YERPG RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205828990|sp|A4TLN3|MNMA_YERPP RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205828991|sp|B1JI67|MNMA_YERPY RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|21958608|gb|AAM85367.1|AE013782_8 hypothetical protein y1799 [Yersinia pestis KIM 10]
 gi|45436440|gb|AAS61995.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis biovar Microtus str. 91001]
 gi|51590034|emb|CAH21668.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pseudotuberculosis IP 32953]
 gi|108775803|gb|ABG18322.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis Nepal516]
 gi|108779794|gb|ABG13852.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis Antiqua]
 gi|115347385|emb|CAL20283.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis CO92]
 gi|145210788|gb|ABP40195.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis Pestoides F]
 gi|149290772|gb|EDM40847.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis CA88-4125]
 gi|162354234|gb|ABX88182.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis Angola]
 gi|165913643|gb|EDR32263.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|165922532|gb|EDR39683.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165992452|gb|EDR44753.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166208285|gb|EDR52765.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166960351|gb|EDR56372.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167048808|gb|EDR60216.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167054667|gb|EDR64471.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|169750495|gb|ACA68013.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pseudotuberculosis YPIII]
 gi|186698845|gb|ACC89474.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pseudotuberculosis PB1/+]
 gi|229680522|gb|EEO76619.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis Nepal516]
 gi|229689350|gb|EEO81413.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis biovar Orientalis str. India 195]
 gi|229694088|gb|EEO84136.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229703505|gb|EEO90522.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis Pestoides A]
 gi|262362281|gb|ACY59002.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis D106004]
 gi|262366214|gb|ACY62771.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis D182038]
 gi|270338849|gb|EFA49626.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis KIM D27]
 gi|294354623|gb|ADE64964.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Yersinia pestis Z176003]
 gi|320014781|gb|ADV98352.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
           [Yersinia pestis biovar Medievalis str. Harbin 35]
          Length = 371

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 52/192 (27%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +V  L     + +  E  C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYQVAGLFMKNWEEDDDEEYCS--AATDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +A            +  + I F  F  
Sbjct: 57  ADAQAVCDKLGMELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G            R                 L  E       P+  L
Sbjct: 115 FAAEDLGADYIATGHYVRRQDVDGKSRLLRGLDGNKDQSYFLYTLSHEQIAQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K E  ++A+ +
Sbjct: 175 EKPEVRRIAEQL 186


>gi|295689108|ref|YP_003592801.1| hypothetical protein Cseg_1700 [Caulobacter segnis ATCC 21756]
 gi|295431011|gb|ADG10183.1| conserved hypothetical protein [Caulobacter segnis ATCC 21756]
          Length = 458

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/227 (11%), Positives = 46/227 (20%), Gaps = 26/227 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++ +S G DS    +                      E      VR ++       K 
Sbjct: 143 KTIIPYSNGLDSLAVAAL-------------------TSEARPSDLVRVRLGAAFADQKS 183

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                                 K  + + +             +             G  
Sbjct: 184 HNKRRQAFASVPYEVRVAKGRRKESSARSRGFKFAVITGIAAVLAKADKIVVTESGQGAL 243

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
             V                     +E      +        P +W  K ET   A     
Sbjct: 244 GPV-LTVSGQAYPDYRVHPAFTMRVERLFATLLGHSAHYDFPRLWSTKGETIAEAARATP 302

Query: 190 QDLVNLILEESHTCYL-GKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
           Q        E+ +C+   ++         C  C AC LR+       
Sbjct: 303 Q-----PWAETRSCWQQSRQVGMGGKQRQCGVCAACMLRRMSLHAAG 344


>gi|326386236|ref|ZP_08207860.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Novosphingobium nitrogenifigens DSM 19370]
 gi|326209461|gb|EGD60254.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Novosphingobium nitrogenifigens DSM 19370]
          Length = 401

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 50/185 (27%), Gaps = 9/185 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   + A      V  ++   Y        +   C  + I +      
Sbjct: 40  RIVVAMSGGVDSSVVAALAARSGAEVIGVTLQLYDHGAATGRKGACCAGEDIRDARAVAD 99

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++            ++ +  A        P   +             +A  LG 
Sbjct: 100 RLGFAHYVFDH---ESDFREAVVERFADDYLSGRTPIPCIRCNMGPKFTDLMAMARDLGA 156

Query: 129 TNI---VIGVCETDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKL 183
             +            +G    R       ++    G        +  PL  L K +  ++
Sbjct: 157 DCLATGHYVRRVMTATGPELHRAVDPARDQSYFLYGTTDEQLAFLRFPLGGLAKPDVRRI 216

Query: 184 AQDIG 188
           A ++G
Sbjct: 217 AGELG 221


>gi|293396528|ref|ZP_06640804.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Serratia odorifera DSM 4582]
 gi|291420792|gb|EFE94045.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Serratia odorifera DSM 4582]
          Length = 370

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 51/192 (26%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +V  L     + +  E  C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVTAYLLQQQGYQVAGLFMKNWEEDDDEEYCS--AATDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +             +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G            R                 L  E       P+  L
Sbjct: 115 FAAEDLGADFIATGHYVRRQDVDGKNRLLRGVDGNKDQSYFLYTLSHEQVAQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K +  ++A+ +
Sbjct: 175 EKPQVRRIAEQL 186


>gi|224542883|ref|ZP_03683422.1| hypothetical protein CATMIT_02077 [Catenibacterium mitsuokai DSM
           15897]
 gi|224524213|gb|EEF93318.1| hypothetical protein CATMIT_02077 [Catenibacterium mitsuokai DSM
           15897]
          Length = 376

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/193 (10%), Positives = 40/193 (20%), Gaps = 17/193 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN--------KVELECRLCVRKKI 60
              +L  SGG DS+        +   V  +       +            +      K  
Sbjct: 2   KRVVLGLSGGVDSAVAAYLLKKQGYEVICVFMRNWDSSLNNDILGNPTNDDDVCPQEKDY 61

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E   +    + +      T  +    +        +     I      
Sbjct: 62  QDAQAVATHLGLEIRRVD--FIKEYWDQVFTYFLEEYAKGRTPNPDILC-NKHIKFKAFL 118

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMW 174
             A  +    I  G                               L          P+  
Sbjct: 119 DYAKSIDADYIATGHYARVVHTEGKESVMLRGVDNNKDQTYFLCQLNQNQLNNSLFPIGE 178

Query: 175 LKKYETWKLAQDI 187
           L K E  ++A+++
Sbjct: 179 LTKPEVRRIAEEL 191


>gi|150003178|ref|YP_001297922.1| argininosuccinate synthase [Bacteroides vulgatus ATCC 8482]
 gi|237711978|ref|ZP_04542459.1| argininosuccinate synthase [Bacteroides sp. 9_1_42FAA]
 gi|254882464|ref|ZP_05255174.1| argininosuccinate synthase [Bacteroides sp. 4_3_47FAA]
 gi|265753213|ref|ZP_06088782.1| argininosuccinate synthase [Bacteroides sp. 3_1_33FAA]
 gi|319640435|ref|ZP_07995157.1| argininosuccinate synthase [Bacteroides sp. 3_1_40A]
 gi|149931602|gb|ABR38300.1| argininosuccinate synthase [Bacteroides vulgatus ATCC 8482]
 gi|229454673|gb|EEO60394.1| argininosuccinate synthase [Bacteroides sp. 9_1_42FAA]
 gi|254835257|gb|EET15566.1| argininosuccinate synthase [Bacteroides sp. 4_3_47FAA]
 gi|263236399|gb|EEZ21894.1| argininosuccinate synthase [Bacteroides sp. 3_1_33FAA]
 gi|317387922|gb|EFV68779.1| argininosuccinate synthase [Bacteroides sp. 3_1_40A]
          Length = 402

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 12/135 (8%)

Query: 4   IIKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +K    ++ FSGG D S T +  A ++   V     + G  ++ +L+       K+  
Sbjct: 1   MEEKKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSEEQLKQNEENAYKLGA 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +             + L +  +    SL   V   +  N      V    I   +  A  
Sbjct: 61  V-----------KYVTLDVTREYYEKSLKYMVFGNVLRNGTYPISVSSERIFQGLAIARY 109

Query: 123 AYRLGITNIVIGVCE 137
           A  +G   I  G   
Sbjct: 110 ANEIGADAIAHGSTG 124


>gi|160875703|ref|YP_001555019.1| tRNA-specific 2-thiouridylase MnmA [Shewanella baltica OS195]
 gi|160861225|gb|ABX49759.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shewanella baltica OS195]
 gi|315267892|gb|ADT94745.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shewanella baltica OS678]
          Length = 392

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 53/192 (27%), Gaps = 10/192 (5%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +        ++  SGG DSS      + +  +VE L     + +     C     + + +
Sbjct: 25  EPTHTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDNNEYCA--AAEDLKD 82

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     + H +      +   +     +A            +  + I F  F    
Sbjct: 83  AQAVCDKLGIKLHTVN--FAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFA 140

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLK 176
              L    I +G                               L  E       P+  L+
Sbjct: 141 DEILDADYIAMGHYVRRRDNTDGSTQMLRGVDGNKDQSYFLYTLSHEQVARSLFPVGELE 200

Query: 177 KYETWKLAQDIG 188
           K+E  ++A+++G
Sbjct: 201 KHEVREIAKEMG 212


>gi|126174691|ref|YP_001050840.1| tRNA-specific 2-thiouridylase MnmA [Shewanella baltica OS155]
 gi|125997896|gb|ABN61971.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shewanella baltica OS155]
          Length = 392

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 53/192 (27%), Gaps = 10/192 (5%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +        ++  SGG DSS      + +  +VE L     + +     C     + + +
Sbjct: 25  EPTHTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDNNEYCA--AAEDLKD 82

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     + H +      +   +     +A            +  + I F  F    
Sbjct: 83  AQAVCDKLGIKLHTVN--FAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFA 140

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLK 176
              L    I +G                               L  E       P+  L+
Sbjct: 141 DEILDADYIAMGHYVRRRDNSDGSTQMLRGVDGNKDQSYFLYTLSHEQVARSLFPVGELE 200

Query: 177 KYETWKLAQDIG 188
           K+E  ++A+++G
Sbjct: 201 KHEVREIAKEMG 212


>gi|312135463|ref|YP_004002801.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Caldicellulosiruptor owensensis OL]
 gi|311775514|gb|ADQ05001.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Caldicellulosiruptor owensensis OL]
          Length = 360

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 51/187 (27%), Gaps = 7/187 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                L+  SGG DSS   +   +    V   +    Q    +   R      +  +   
Sbjct: 1   MKKKVLVAMSGGVDSSVAAAILKEEGYEVYGATMQIWQTETEDELIREKSCCSLTAVDDA 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            + +   D    +  + D     +      +      PN  +     I        A  L
Sbjct: 61  RRVAHILDIPYYVFNMKDNFKKEVINYFVGEYIKGRTPNPCIMCNRKIKFELFLKKAIAL 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAI---NLGMESHVTVHTPLMW----LKKYE 179
           G+  I  G           CR+   R+         +       + +  ++      K E
Sbjct: 121 GMDYIATGHYAIIEYDNTLCRYLLKRSKAREKDQTYVLYNMTQEILSKTIFPLGRFSKDE 180

Query: 180 TWKLAQD 186
             KLA+ 
Sbjct: 181 VRKLAEK 187


>gi|160888019|ref|ZP_02069022.1| hypothetical protein BACUNI_00425 [Bacteroides uniformis ATCC 8492]
 gi|270295613|ref|ZP_06201814.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|317478596|ref|ZP_07937753.1| argininosuccinate synthase [Bacteroides sp. 4_1_36]
 gi|156862518|gb|EDO55949.1| hypothetical protein BACUNI_00425 [Bacteroides uniformis ATCC 8492]
 gi|270274860|gb|EFA20721.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|316905237|gb|EFV27034.1| argininosuccinate synthase [Bacteroides sp. 4_1_36]
          Length = 401

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 53/193 (27%), Gaps = 13/193 (6%)

Query: 5   IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           ++K    ++ FSGG D S T +    ++   V     + G  +  +L+       K+   
Sbjct: 1   MEKKKKVVVAFSGGLDTSFTVMYLTKEKGYEVYAACANTGGFSAEQLKTNEENAYKLGAK 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                        + L +  +    SL   V   +  N      V    I   +  A  A
Sbjct: 61  EY-----------VTLDVTQEYYEKSLKYMVFGNVLRNGTYPISVSSERIFQALAIARYA 109

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM-WLKKYETWK 182
             +G   I  G                + A    I              + +L K+    
Sbjct: 110 NEIGADAIAHGSTGAGNDQIRFDMTFLVMAPGVEIITLTRDMALSRQEEIDYLNKHGFAA 169

Query: 183 LAQDIGGQDLVNL 195
               +     V L
Sbjct: 170 DFTKLKYSYNVGL 182


>gi|18976558|ref|NP_577915.1| n-type ATP pyrophosphatase superfamily protein [Pyrococcus furiosus
           DSM 3638]
 gi|18892117|gb|AAL80310.1| n-type ATP pyrophosphatase superfamily [Pyrococcus furiosus DSM
           3638]
          Length = 275

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 39/96 (40%), Gaps = 1/96 (1%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKK 59
           + +++ +   A++ +SGG+DS+  L  A + +D  VE +  D+G      +E    V + 
Sbjct: 46  LEELLSQVDKAIVAYSGGKDSTVALYLAKEEYDIDVEAVMVDHGFMAPQAIENAKKVSEY 105

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVA 95
           +   +   ++   E     L            + + 
Sbjct: 106 LNVPLTIIREDYSEIFKDALLKAKSPCRKCSRRTME 141


>gi|19705225|ref|NP_602720.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
           [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
 gi|81479885|sp|Q8R5Z5|MNMA2_FUSNN RecName: Full=tRNA-specific 2-thiouridylase mnmA 2
 gi|19713176|gb|AAL94019.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
           [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
          Length = 343

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 51/180 (28%), Gaps = 7/180 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKW 67
              ++  SGG DSS       ++   V  ++ +   + N  ++E    V  K+  +    
Sbjct: 2   KKVVIGMSGGVDSSVSAYLLKEQGYEVIGITLNQHLEENSKDIEDTKKVCDKLGIIHEVV 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                 ++I+    L +  +S  T +  +   D           +     + A      G
Sbjct: 62  NIRKDFENIVIKYFL-EGYNSGKTPSPCIICDDEIKFKILFDIADKYNAEYVA-----TG 115

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
               V                           L  +    +  PL    K E  ++A  I
Sbjct: 116 HYTSVEYSEVFSKYLLKSVHSIIKDQSYMLYRLSPDKLERLIFPLKDYSKQEIREIALKI 175


>gi|317495071|ref|ZP_07953443.1| tRNA methyl transferase [Gemella moribillum M424]
 gi|316914843|gb|EFV36317.1| tRNA methyl transferase [Gemella moribillum M424]
          Length = 370

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 53/189 (28%), Gaps = 10/189 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      ++  SGG DSS        +   V  +        + + +   CV +K  E +
Sbjct: 1   MSNGKKVVVGMSGGVDSSVTAYLLKQQGYDVIGVFMKNW---EEKDDRGGCVAEKDYEDV 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            K  + L   +            + +      + +    PN  +     I        A 
Sbjct: 58  IKVCEQLDIPY--YSINFEKEYWNKVFTYFLDEYKKGRTPNPDIMCNKEIKFKVFLEYAE 115

Query: 125 RLGITNIVIGVCETDYSGYPDC-----RHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            LG   +  G                   +          L       +  P+  L+K +
Sbjct: 116 DLGADYVATGHYARVKDEDNQRLLLRGVDNNKDQTYFLSQLKQHQIKNILFPVGELEKKD 175

Query: 180 TWKLAQDIG 188
             ++A++ G
Sbjct: 176 VRRIAEEAG 184


>gi|153000990|ref|YP_001366671.1| tRNA-specific 2-thiouridylase MnmA [Shewanella baltica OS185]
 gi|151365608|gb|ABS08608.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shewanella baltica OS185]
          Length = 392

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 53/192 (27%), Gaps = 10/192 (5%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +        ++  SGG DSS      + +  +VE L     + +     C     + + +
Sbjct: 25  EPTHTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDNNEYCA--AAEDLKD 82

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     + H +      +   +     +A            +  + I F  F    
Sbjct: 83  AQAVCDKLGIKLHTVN--FAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFA 140

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLK 176
              L    I +G                               L  E       P+  L+
Sbjct: 141 DEILDADYIAMGHYVRRRDNSDGSTQMLRGVDGNKDQSYFLYTLSHEQVARSLFPVGELE 200

Query: 177 KYETWKLAQDIG 188
           K+E  ++A+++G
Sbjct: 201 KHEVREIAKEMG 212


>gi|126661854|ref|ZP_01732853.1| (5-methylaminomethyl-2-thiouridylate)-methyltran sferase
           [Flavobacteria bacterium BAL38]
 gi|126625233|gb|EAZ95922.1| (5-methylaminomethyl-2-thiouridylate)-methyltran sferase
           [Flavobacteria bacterium BAL38]
          Length = 395

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 48/188 (25%), Gaps = 12/188 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS       ++   V  L       + V +       +   + +   +
Sbjct: 2   KRVVVGLSGGVDSSVAAYLLKEQGYEVIGLFMKNWHDDSVTISNECPWLEDSNDALLVAE 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   + L+            N     +    PN  V     I       +A  LG 
Sbjct: 62  KLGIPFQTVDLSEQYKEKIVDYMFNE---YEKGRTPNPDVLCNREIKFDVFMKIAMSLGA 118

Query: 129 TNIVIGVCETDYSGYPDCRHDTI---------RAIETAINLGMESHVTVHTPLMWLKKYE 179
             +  G      +   + +                     L  +       P+  L K E
Sbjct: 119 DYVATGHYCRKGTIEENGKEVFQLLAGKDDNKDQSYFLCQLSQDQLAKALFPIGELTKPE 178

Query: 180 TWKLAQDI 187
             ++A  +
Sbjct: 179 VREIATKL 186


>gi|167037462|ref|YP_001665040.1| tRNA-specific 2-thiouridylase MnmA [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|300914208|ref|ZP_07131524.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacter sp. X561]
 gi|307724557|ref|YP_003904308.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacter sp. X513]
 gi|320115876|ref|YP_004186035.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacter brockii subsp. finnii Ako-1]
 gi|205810696|sp|B0K991|MNMA2_THEP3 RecName: Full=tRNA-specific 2-thiouridylase mnmA 2
 gi|205815314|sp|B0K0P8|MNMA2_THEPX RecName: Full=tRNA-specific 2-thiouridylase mnmA 2
 gi|166856296|gb|ABY94704.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|300889143|gb|EFK84289.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacter sp. X561]
 gi|307581618|gb|ADN55017.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacter sp. X513]
 gi|319928967|gb|ADV79652.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacter brockii subsp. finnii Ako-1]
          Length = 364

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 53/193 (27%), Gaps = 13/193 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV---ELECRLCVRKKIV 61
           ++      +  SGG DSS        +   V  L+      ++    + +   C  K   
Sbjct: 1   MEINNRVAIGMSGGVDSSVAAYLLKKQGFDVIGLTMRVWVDHEAKAFDSDKSCCSLKATQ 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +     +      + + L+ +      +   N          PN  V     I       
Sbjct: 61  DAKKVAEILGIPHYTVDLSKIFYDKIVNYFVNE---YLKGRTPNPCVLCNRQIKFGELLE 117

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMW 174
            A+ LG   I  G            R+        +         L  +       PL  
Sbjct: 118 KAFELGAYYIATGHYVRKEYDEKTKRYLLKKGIDSSKDQSYVLYRLTQKQLEHALFPLGN 177

Query: 175 LKKYETWKLAQDI 187
            KK E   LA+++
Sbjct: 178 YKKEEIRALAEEL 190


>gi|57641491|ref|YP_183969.1| PP family ATPase [Thermococcus kodakarensis KOD1]
 gi|57159815|dbj|BAD85745.1| ATPase, PP-loop superfamily [Thermococcus kodakarensis KOD1]
          Length = 304

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 2/71 (2%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKK 59
             ++K     L++ SGG+DS+            +E L  + G     E          +K
Sbjct: 41  YKMLKPDEKVLVVVSGGKDSAVTAHVLKKLGYNIECLHINLGIGEYSEKGERYAREQCEK 100

Query: 60  IVELMPKWKDS 70
           I   +   +  
Sbjct: 101 IGAPLHIVRLK 111


>gi|251790662|ref|YP_003005383.1| thiamine biosynthesis protein ThiI [Dickeya zeae Ech1591]
 gi|247539283|gb|ACT07904.1| thiamine biosynthesis/tRNA modification protein ThiI [Dickeya zeae
           Ech1591]
          Length = 482

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 57/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAI-------DFEPVVGEILEKVDDGQMGVVLKRMMVRAASRIAERYGVEA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K    +LA+++G +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIIRLARELGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|77361203|ref|YP_340778.1| thiamine biosynthesis protein ThiI [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76876114|emb|CAI87336.1| thiamine biosynthesis protein [Pseudoalteromonas haloplanktis
           TAC125]
          Length = 485

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 54/187 (28%), Gaps = 25/187 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      L L SGG DS       + +  R   L F+ G            +  K     
Sbjct: 177 LPTQEDVLSLMSGGFDSGVASYQMIRKGARTHFLFFNLGG-------AAHEIGVKQASYY 229

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             W        +           +   + V  +I +N   +        + +   + +A 
Sbjct: 230 -LWNKYSSTHKV--------KFITVDFEPVVAEILENIENSQMGVVLKRMMMRAGSKVAE 280

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           +L I  +V G      S         I  +   +         +  PL+   K E   +A
Sbjct: 281 KLNIQALVTGESIGQVSSQTLANLSVIDRVTETL---------ILRPLIQHDKQEIINIA 331

Query: 185 QDIGGQD 191
           + IG  +
Sbjct: 332 RQIGTAE 338


>gi|146297250|ref|YP_001181021.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Caldicellulosiruptor saccharolyticus DSM 8903]
 gi|205814264|sp|A4XLP5|MNMA_CALS8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|145410826|gb|ABP67830.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 361

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 44/188 (23%), Gaps = 9/188 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL---ECRLCVRKKIVEL 63
                L+  SGG DSS   +   +    V   +    Q    E        C    + + 
Sbjct: 1   MKKKVLVAMSGGVDSSVAAAILKEEGYEVYGATMQIWQNECGEELITGKSCCSIYAVDDA 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      ++  +             +  +K +  N        +    L     +A
Sbjct: 61  RKVANILDIPYYVFNMKDDFRKIVIDYFIDEYIKGRTPNPC-IMCNRKIKFELFLKKAIA 119

Query: 124 YRLGITNIVIGVCETDYSGYPDC---RHDTIRAIETAINLGMESHVTVHTPLM--WLKKY 178
             +              S        R       +T +   M   +   T        K 
Sbjct: 120 IGMDYIATGHYAIIEYDSSLNRYLLKRSKAKEKDQTYVLYNMTQEMLSKTLFPLGRFSKD 179

Query: 179 ETWKLAQD 186
           E  KLA+ 
Sbjct: 180 EVRKLAEK 187


>gi|149911105|ref|ZP_01899732.1| thiamine biosynthesis protein ThiI [Moritella sp. PE36]
 gi|149805855|gb|EDM65844.1| thiamine biosynthesis protein ThiI [Moritella sp. PE36]
          Length = 484

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 57/195 (29%), Gaps = 25/195 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      L L SGG DS+      + R  R     F+ G            +  K +   
Sbjct: 176 MAGQEDVLSLMSGGFDSAVSSYLTIKRGSRTHFCFFNLGGD-------AHEIGVKQISYF 228

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             W        +           S     V  +I +    +        + +  A+ +A 
Sbjct: 229 -LWNKYSSSHKV--------KFVSVPFDPVVAEILEKVDNSQMGVVLKRMMMRAASKVAE 279

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           RLGI  +V G      S         I ++   +         +  PL+   K +    A
Sbjct: 280 RLGIEALVTGEAVGQVSSQTIRNLSLIDSVTDTL---------ILRPLIVADKQDIIDTA 330

Query: 185 QDIGGQDLVNLILEE 199
           + IG  +    I E 
Sbjct: 331 RKIGTAEFSETIPEY 345


>gi|254302170|ref|ZP_04969528.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
 gi|148322362|gb|EDK87612.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
          Length = 343

 Score = 59.9 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 65/234 (27%), Gaps = 32/234 (13%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKW 67
              ++  SGG DSS       ++   V  ++ +   + N  ++E    V  K+       
Sbjct: 2   KKVVIGISGGVDSSVSAYLLKEQGYEVIGVTLNQHLEENSKDIEDAKKVCNKLGISHEVI 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                 ++ +    L D   + +T +  +   D           +     + A      G
Sbjct: 62  NIRKDFENTVIKYFL-DGYSTGITPSPCVICDDEIKFKILFDIADKYKAEYVA-----TG 115

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
               V                           L       +  PL    K +  ++A  I
Sbjct: 116 HYTSVEYSEFFSKYLLKSVHSIIKDQSYMLYRLSPTKLERLIFPLKPYSKQKIREIALKI 175

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF-KEKYQD 240
           G +             Y  K  +          C A    ++G+ EF KE  +D
Sbjct: 176 GLEV------------YNKKDSQ--------GVCFA----KEGYKEFLKENLKD 205


>gi|302871531|ref|YP_003840167.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Caldicellulosiruptor obsidiansis OB47]
 gi|302574390|gb|ADL42181.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Caldicellulosiruptor obsidiansis OB47]
          Length = 360

 Score = 59.5 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 51/187 (27%), Gaps = 7/187 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                L+  SGG DSS   +   +    V   +    Q    +   R      +  +   
Sbjct: 1   MKKKVLVAMSGGVDSSVAAAILKEEGYEVYGATMQIWQTETEDELIREKSCCSLTAVDDA 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            + +   D    +  + +     +      +      PN  +     I        A  L
Sbjct: 61  RRVAHILDIPYYVFNMKEDFKKEVINYFIDEYIKGRTPNPCIMCNRKIKFELFLKRAMVL 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETA-------INLGMESHVTVHTPLMWLKKYE 179
           G+  I  G           CR+   R+            N+  E       PL    K E
Sbjct: 121 GMDYIATGHYAIIEYDNTLCRYLLKRSKAREKDQTYVLYNMTQEMLSKTIFPLGRFSKDE 180

Query: 180 TWKLAQD 186
             KLA+ 
Sbjct: 181 VRKLAEK 187


>gi|296133414|ref|YP_003640661.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermincola sp. JR]
 gi|296031992|gb|ADG82760.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermincola potens JR]
          Length = 358

 Score = 59.5 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 53/189 (28%), Gaps = 11/189 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS   +   ++   V  ++       + + E   C    + +    
Sbjct: 2   PKSKVVVAMSGGVDSSLAAALLQEQGYDVIGVTMQIW-PAEEQAEGGCCSLAAVEDARRV 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   +++    L     + +    A  +         V  R  +        A  L
Sbjct: 61  ADTLGIPYYVMNFRDL--FRKTVIADFCAEYMAGRTPNPCIVCNRK-VKFEALLQKALAL 117

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETA-------INLGMESHVTVHTPLMWLKKYE 179
           G   I  G            R+   RA++          NL          PL    K E
Sbjct: 118 GAEYIATGHYARLSYDEARRRYLMRRALDRGKDQTYALYNLTQYQLKHTLMPLGNYTKAE 177

Query: 180 TWKLAQDIG 188
             ++A  +G
Sbjct: 178 AREMAAKLG 186


>gi|291459813|ref|ZP_06599203.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291417603|gb|EFE91322.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 363

 Score = 59.5 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 50/191 (26%), Gaps = 13/191 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--RLCVRKKIVELM 64
               AL+  SGG DSS   +   +R      ++    ++           C  +   +  
Sbjct: 1   MGKKALVAMSGGVDSSVAAALMKERGYDCIGVTMKLYEKEGGGTCRVGSCCTAEDAEDAR 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     ++             + +  A        PN  +     +        A 
Sbjct: 61  QAASVLGIPYYVFN---FTGDFEREVIRRFAETYLKGGTPNPCIDCNRYMKHRRLYQRAR 117

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--------TVHTPLMWLK 176
            LG  +I  G            R    +A   A +     +         +V     +  
Sbjct: 118 ELGFDSIATGHYARVSFDAGRGRWLLKKARNAAKDQSYVLYFLSQEQLSHSVFPLGDFET 177

Query: 177 KYETWKLAQDI 187
           K E  +LA+ +
Sbjct: 178 KEEVRELAEKL 188


>gi|212634687|ref|YP_002311212.1| tRNA-specific 2-thiouridylase MnmA [Shewanella piezotolerans WP3]
 gi|226704776|sp|B8CLH4|MNMA_SHEPW RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|212556171|gb|ACJ28625.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shewanella piezotolerans WP3]
          Length = 371

 Score = 59.5 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 51/185 (27%), Gaps = 9/185 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS      + +  +VE L     + +  +  C       + +      
Sbjct: 11  KKVIVGMSGGVDSSVSAYLLMKQGYQVEGLFMKNWEEDDTDEYCA--AADDLKDAQAVCD 68

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + H +      +   +     +A            +  + I F  F       L  
Sbjct: 69  KLGIKLHTVN--FASEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFADEILDA 126

Query: 129 TNIVIGVCETDYSGYPDCRH-----DTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             I +G            +                 L  E       P+  L+K E   +
Sbjct: 127 DYIAMGHYVRRRDIDGTSQMLRGVDGNKDQSYFLYTLSHEQVARSLFPVGELEKSEVRDI 186

Query: 184 AQDIG 188
           A+++G
Sbjct: 187 AKEMG 191


>gi|170751444|ref|YP_001757704.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylobacterium radiotolerans JCM 2831]
 gi|205816882|sp|B1LV15|MNMA_METRJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|170657966|gb|ACB27021.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylobacterium radiotolerans JCM 2831]
          Length = 384

 Score = 59.5 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 49/186 (26%), Gaps = 10/186 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS        +   V  ++   Y        +   C  + I +     +
Sbjct: 14  RVVVAMSGGVDSSVVAGLLKRQGFDVVGVTLQLYDHGAASHRKGACCAGQDIHDARAAAE 73

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L            + +  A        P   V     +       LA  L  
Sbjct: 74  HLGIPHYVLDYED---RFRDEVIEKFAESYLAGETPIPCVECNRTVKFRDLLGLARDLDA 130

Query: 129 TNI----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYETWK 182
             +     +        G    R       ++       +            ++K ET  
Sbjct: 131 DALATGHYVASRALPGGGRALHRALDPARDQSYFLYATTAEQLDFLRFPLGEMEKTETRA 190

Query: 183 LAQDIG 188
           LA+++G
Sbjct: 191 LAKELG 196


>gi|74316869|ref|YP_314609.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thiobacillus denitrificans ATCC 25259]
 gi|123612137|sp|Q3SKH7|MNMA_THIDA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|74056364|gb|AAZ96804.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thiobacillus denitrificans ATCC 25259]
          Length = 358

 Score = 59.5 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 45/197 (22%), Gaps = 13/197 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMP 65
            +   ++  SGG DS+        +   V  +   ++   +  E            + + 
Sbjct: 1   MSTRVVVGLSGGVDSAVAAYLLKQQGYDVLGVFMKNWDDDDNTEHCTARQ------DFLD 54

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
               +      +            +      + Q    PN  V     I        A  
Sbjct: 55  VLAVADVLGIEVEAVNFAAEYKERVFSYFLAEYQAGRTPNPDVLCNAEIKFKAFLDDAIA 114

Query: 126 LGITNIVIGVCETDYSGYP------DCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            G   I  G                  R            L          PL  L K E
Sbjct: 115 RGADYIATGHYVGKGHDTFGRAALLRARDANKDQSYFLYRLNQAQLSPALFPLARLPKPE 174

Query: 180 TWKLAQDIGGQDLVNLI 196
             ++A+ IG  +     
Sbjct: 175 VREIARRIGLPNAAKKD 191


>gi|126459655|ref|YP_001055933.1| thiamine biosynthesis protein ThiI [Pyrobaculum calidifontis JCM
           11548]
 gi|126249376|gb|ABO08467.1| thiamine biosynthesis/tRNA modification protein ThiI [Pyrobaculum
           calidifontis JCM 11548]
          Length = 473

 Score = 59.5 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 57/184 (30%), Gaps = 26/184 (14%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L L SGG DS       + R   V+      G            +++ +  +      
Sbjct: 171 KVLALVSGGIDSPVAAWMLMRRGAHVDVFHCALGGTPT--------LKRSLEVIRQLLSW 222

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           S G +  + +A             VA  I+       +         + AA  A R+   
Sbjct: 223 SYGYNARVIVADCS---------PVAKAIRAKVREELWNIAFKRALYLAAAEAARRVKAL 273

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +  G      S          + ++    +     + V  PL+ + K E  +LA+ IG 
Sbjct: 274 ALATGESLGQVSS---------QTLQALAAVEKGLDMPVLRPLIGMDKEEIVQLAKRIGT 324

Query: 190 QDLV 193
            DL 
Sbjct: 325 YDLS 328


>gi|307944132|ref|ZP_07659473.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Roseibium sp. TrichSKD4]
 gi|307772478|gb|EFO31698.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Roseibium sp. TrichSKD4]
          Length = 390

 Score = 59.5 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 47/185 (25%), Gaps = 9/185 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +   +    V  ++   Y     V      C    I +     +
Sbjct: 15  RVVVAMSGGVDSSVVAALMKEEGYDVIGVTLQLYDHGAAVSRAKSCCAGVDIHDARRAAE 74

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L               +  +  +        V     +        A  LG 
Sbjct: 75  KIGIPHYVLDYESRFKEQVMDRFADSYIAGETPIPC---VSCNQTVKFTDLLKTAKDLGA 131

Query: 129 TNI---VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYETWKL 183
             +          D +     R   +   ++             +  PL    K E  +L
Sbjct: 132 DVLATGHYVRSRPDGNKRALFRPVDLDRDQSYFLFATTQEQLDFIRFPLGGRPKSEVRQL 191

Query: 184 AQDIG 188
           A+  G
Sbjct: 192 AEKFG 196


>gi|295091002|emb|CBK77109.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium cf. saccharolyticum K10]
          Length = 359

 Score = 59.5 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 49/190 (25%), Gaps = 12/190 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL---CVRKKIVEL 63
           +    ++  SGG DSS        +   V  ++    Q  + E        C    + + 
Sbjct: 2   EKKKVVVGMSGGVDSSVAAWLLKKQGYDVIGVTMQIWQDEEPEAVEENGGCCGLSAVDDA 61

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
               +D     +++           ++      +      PN  +     +        +
Sbjct: 62  RRVAEDLAIPYYVMN---FKKEFRENVMDYFVAEYLRGRTPNPCIACNRFVKWESLLKRS 118

Query: 124 YRLGITNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
             +G   I  G                              NL  E       P+    K
Sbjct: 119 LEIGADYIATGHYARIEKLPNGRYALKKSATAAKDQTYALYNLTQEQLAHTLMPVGEYTK 178

Query: 178 YETWKLAQDI 187
            E  K+AQ++
Sbjct: 179 DEIRKMAQEL 188


>gi|283795899|ref|ZP_06345052.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium sp. M62/1]
 gi|291076535|gb|EFE13899.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium sp. M62/1]
          Length = 359

 Score = 59.5 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 49/190 (25%), Gaps = 12/190 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL---CVRKKIVEL 63
           +    ++  SGG DSS        +   V  ++    Q  + E        C    + + 
Sbjct: 2   EKKKVVVGMSGGVDSSVAAWLLKKQGYDVIGVTMQIWQDEEPEAVEENGGCCGLSAVDDA 61

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
               +D     +++           ++      +      PN  +     +        +
Sbjct: 62  RRVAEDLAIPYYVMN---FKKEFRENVMDYFVAEYLRGRTPNPCIACNRFVKWESLLKRS 118

Query: 124 YRLGITNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
             +G   I  G                              NL  E       P+    K
Sbjct: 119 LEIGADYIATGHYARIEKLPNGRYALKKSATAAKDQTYALYNLTQEQLAHTLMPVGEYTK 178

Query: 178 YETWKLAQDI 187
            E  K+AQ++
Sbjct: 179 DEIRKMAQEL 188


>gi|205821998|sp|A9L4G9|MNMA_SHEB9 RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 372

 Score = 59.5 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 53/192 (27%), Gaps = 10/192 (5%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +        ++  SGG DSS      + +  +VE L     + +     C     + + +
Sbjct: 5   EPTHTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDNNEYCA--AAEDLKD 62

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     + H +      +   +     +A            +  + I F  F    
Sbjct: 63  AQAVCDKLGIKLHTVN--FAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFA 120

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLK 176
              L    I +G                               L  E       P+  L+
Sbjct: 121 DEILDADYIAMGHYVRRRDNTDGSTQMLRGVDGNKDQSYFLYTLSHEQVARSLFPVGELE 180

Query: 177 KYETWKLAQDIG 188
           K+E  ++A+++G
Sbjct: 181 KHEVREIAKEMG 192


>gi|311746884|ref|ZP_07720669.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Algoriphagus sp. PR1]
 gi|126578570|gb|EAZ82734.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Algoriphagus sp. PR1]
          Length = 403

 Score = 59.5 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/193 (11%), Positives = 55/193 (28%), Gaps = 14/193 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC----------RL 54
           +K  P  ++  SGG DSS      L++   V  +         V +             +
Sbjct: 1   MKTKPRVVVGLSGGVDSSVAAHLLLEQGYEVIGMFMKNWHDESVTISNECPWMEDSTDAM 60

Query: 55  CVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            V +K+         S      +   + G+           +  ++          + + 
Sbjct: 61  LVAEKLGIPFQAIDLSEEYRERIVDYMFGEYKAGRTPNPDILCNREIKFDIFLKAAQKLK 120

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
               A     + G   +         +G    +  +    +       ++   +      
Sbjct: 121 ADFVATGHYCQKGEIEVDGKPVYQLLAGADPNKDQSYFLCQLDQEQLSKALFPIG----H 176

Query: 175 LKKYETWKLAQDI 187
           L+K E  K+A+++
Sbjct: 177 LQKPEVRKIAKEL 189


>gi|113971061|ref|YP_734854.1| thiamine biosynthesis protein ThiI [Shewanella sp. MR-4]
 gi|123130220|sp|Q0HGM0|THII_SHESM RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|113885745|gb|ABI39797.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
           sp. MR-4]
          Length = 484

 Score = 59.5 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 61/188 (32%), Gaps = 25/188 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      L L SGG DS       + +  R     F+ G         +  +   + ++ 
Sbjct: 176 MATQEDVLSLISGGFDSGVSSYQFIKKGARTHYCFFNLGG-------AQHEI--GVKQVA 226

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                + GE H +          S   + V  +I +             + +  AA +A 
Sbjct: 227 YHLWKTYGESHKVKF-------VSVPFEPVVAEILEKIDNGQMGVVLKRMMMRTAARIAE 279

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           R+GI  IV G      S          + +     +   + + +  PL+ + K +     
Sbjct: 280 RMGIQAIVTGESLGQVSS---------QTLTNLNVIDRCTDMLILRPLIAMDKQDIINEC 330

Query: 185 QDIGGQDL 192
           + IG +D 
Sbjct: 331 RRIGTEDF 338


>gi|114048291|ref|YP_738841.1| thiamine biosynthesis protein ThiI [Shewanella sp. MR-7]
 gi|122944502|sp|Q0HSX1|THII_SHESR RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|113889733|gb|ABI43784.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
           sp. MR-7]
          Length = 484

 Score = 59.5 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 61/188 (32%), Gaps = 25/188 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      L L SGG DS       + +  R     F+ G         +  +   + ++ 
Sbjct: 176 MATQEDVLSLISGGFDSGVSSYQFIKKGARTHYCFFNLGG-------AQHEI--GVKQVA 226

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                + GE H +          S   + V  +I +             + +  AA +A 
Sbjct: 227 YHLWKTYGESHKVKF-------VSVPFEPVVAEILEKIDNGQMGVVLKRMMMRTAARIAE 279

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           R+GI  IV G      S          + +     +   + + +  PL+ + K +     
Sbjct: 280 RMGIQAIVTGESLGQVSS---------QTLTNLNVIDRCTDMLILRPLIAMDKQDIINEC 330

Query: 185 QDIGGQDL 192
           + IG +D 
Sbjct: 331 RRIGTEDF 338


>gi|117921337|ref|YP_870529.1| thiamine biosynthesis protein ThiI [Shewanella sp. ANA-3]
 gi|189030653|sp|A0KZA4|THII_SHESA RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|117613669|gb|ABK49123.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
           sp. ANA-3]
          Length = 484

 Score = 59.5 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 61/188 (32%), Gaps = 25/188 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      L L SGG DS       + +  R     F+ G         +  +   + ++ 
Sbjct: 176 MATQEDVLSLISGGFDSGVSSYQFIKKGARTHYCFFNLGG-------AQHEI--GVKQVA 226

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                + GE H +          S   + V  +I +             + +  AA +A 
Sbjct: 227 YHLWKTYGESHKVKF-------VSVPFEPVVAEILEKIDNGQMGVVLKRMMMRTAARIAE 279

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           R+GI  IV G      S          + +     +   + + +  PL+ + K +     
Sbjct: 280 RMGIQAIVTGESLGQVSS---------QTLTNLNVIDRCTDMLILRPLIAMDKQDIINEC 330

Query: 185 QDIGGQDL 192
           + IG +D 
Sbjct: 331 RRIGTEDF 338


>gi|330828858|ref|YP_004391810.1| putative tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase [Aeromonas veronii B565]
 gi|328803994|gb|AEB49193.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase [Aeromonas veronii B565]
          Length = 368

 Score = 59.5 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 51/183 (27%), Gaps = 9/183 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS        +  +VE L     + +  +  C     + + +       
Sbjct: 8   KVIVGMSGGVDSSVSAYLLQQQGYQVEGLFMKNWEEDDTDEYCS--AAQDLADAKAVCDK 65

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              + H +      +   +     +             +  + I F  F    A  LG T
Sbjct: 66  LGMKLHTIN--FAAEYWDNVFEHFLEEYKAGRTPNPDILCNKEIKFKAFLEFAAEELGAT 123

Query: 130 NIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            I  G            R                 L  +       P+  L+K E  ++A
Sbjct: 124 YIATGHYVRRDDSTGRPRLLRGLDTNKDQSYFLYTLSEKQVGQSLFPVGDLEKPEVRRIA 183

Query: 185 QDI 187
           + +
Sbjct: 184 EQL 186


>gi|212712841|ref|ZP_03320969.1| hypothetical protein PROVALCAL_03938 [Providencia alcalifaciens DSM
           30120]
 gi|212684533|gb|EEB44061.1| hypothetical protein PROVALCAL_03938 [Providencia alcalifaciens DSM
           30120]
          Length = 385

 Score = 59.5 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 55/197 (27%), Gaps = 13/197 (6%)

Query: 1   MNDIIKKAP----SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
           M+D   K+       ++  SGG DSS        +  +V  L     + +  E  C    
Sbjct: 13  MSDNSTKSDNSQIKVIVGMSGGVDSSVSAYLLQQQGYQVIGLFMKNWEEDDDEEYCS--A 70

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
              + +          E   +      +   +     +             +  + I F 
Sbjct: 71  ATDLADAQAVCDKLGIELRTIN--FAAEYWDNVFEHFLEEYKAGRTPNPDILCNKEIKFK 128

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTP 171
            F    A  LG   I  G            +      +          L  E       P
Sbjct: 129 AFLEFAAEDLGADYIATGHYVRRRDVDGKSQLLRGLDNNKDQSYFLYTLSHEQVAKSLFP 188

Query: 172 LMWLKKYETWKLAQDIG 188
           +  L+K E  ++A++IG
Sbjct: 189 VGELEKPEVRRIAEEIG 205


>gi|55378034|ref|YP_135884.1| thiamine biosynthesis protein ThiI [Haloarcula marismortui ATCC
           43049]
 gi|55230759|gb|AAV46178.1| probable thiamine biosynthesis protein ThiI [Haloarcula marismortui
           ATCC 43049]
          Length = 395

 Score = 59.5 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 54/186 (29%), Gaps = 24/186 (12%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            + L SGG DS       + R   V  +  D G     +        + +  +      +
Sbjct: 188 VVALISGGIDSPVAAWKLMKRGAPVIPVYVDLGDYGGPDHR-----ARAVSTVKTLASYA 242

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G D  + +   GD+          +     NL +  +       L  A  +A+      
Sbjct: 243 PGHDLSVNVVEAGDV----------VTDLSQNLGSLRMLVLRRFMLAVAEAIAHDYDAVG 292

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S           A          + + V+ P + + K E    A+ I   
Sbjct: 293 IVTGEAIGQKSSQTSANIAVTDAA---------TTLPVYRPNLTVDKSEITDHARTIETF 343

Query: 191 DLVNLI 196
           +   + 
Sbjct: 344 EDSTID 349


>gi|205821993|sp|A6WP69|MNMA_SHEB8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 372

 Score = 59.5 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 53/192 (27%), Gaps = 10/192 (5%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +        ++  SGG DSS      + +  +VE L     + +     C     + + +
Sbjct: 5   EPTHTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDNNEYCA--AAEDLKD 62

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     + H +      +   +     +A            +  + I F  F    
Sbjct: 63  AQAVCDKLGIKLHTVN--FAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFA 120

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLK 176
              L    I +G                               L  E       P+  L+
Sbjct: 121 DEILDADYIAMGHYVRRRDNSDGSTQMLRGVDGNKDQSYFLYTLSHEQVARSLFPVGELE 180

Query: 177 KYETWKLAQDIG 188
           K+E  ++A+++G
Sbjct: 181 KHEVREIAKEMG 192


>gi|217973050|ref|YP_002357801.1| tRNA-specific 2-thiouridylase MnmA [Shewanella baltica OS223]
 gi|205821978|sp|A3D5F8|MNMA_SHEB5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|254811460|sp|B8E945|MNMA_SHEB2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|217498185|gb|ACK46378.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shewanella baltica OS223]
          Length = 372

 Score = 59.5 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 53/192 (27%), Gaps = 10/192 (5%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +        ++  SGG DSS      + +  +VE L     + +     C     + + +
Sbjct: 5   EPTHTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDNNEYCA--AAEDLKD 62

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     + H +      +   +     +A            +  + I F  F    
Sbjct: 63  AQAVCDKLGIKLHTVN--FAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFA 120

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLK 176
              L    I +G                               L  E       P+  L+
Sbjct: 121 DEILDADYIAMGHYVRRRDNSDGSTQMLRGVDGNKDQSYFLYTLSHEQVARSLFPVGELE 180

Query: 177 KYETWKLAQDIG 188
           K+E  ++A+++G
Sbjct: 181 KHEVREIAKEMG 192


>gi|167759055|ref|ZP_02431182.1| hypothetical protein CLOSCI_01402 [Clostridium scindens ATCC 35704]
 gi|167663462|gb|EDS07592.1| hypothetical protein CLOSCI_01402 [Clostridium scindens ATCC 35704]
          Length = 361

 Score = 59.5 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 50/188 (26%), Gaps = 6/188 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ---RNKVELECRLCVRKKIVEL 63
           +    ++  SGG DSS       ++   V  ++    Q   R   E +   C    + + 
Sbjct: 2   EKKKVVVGMSGGVDSSVAAWLLKEQGYDVIGVTMQIWQDEERIVEEEQGGCCGLSAVDDA 61

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      +++               +  +  +  N             L+  +   
Sbjct: 62  RRVAASLGIPYYVMNFKQEFKTYVIDYFMDEYLHGRTPNPCIACNRYVKWESLLKRSMEI 121

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW---LKKYET 180
               I        E   +G    R     A +    L   +   +   LM      K E 
Sbjct: 122 GADYIATGHYARIERLGNGRCSLRTSAASAKDQTYALYSLTQEQLKRTLMPVGEYTKDEI 181

Query: 181 WKLAQDIG 188
            KLA  IG
Sbjct: 182 RKLAGKIG 189


>gi|304409068|ref|ZP_07390689.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shewanella baltica OS183]
 gi|307303071|ref|ZP_07582826.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shewanella baltica BA175]
 gi|304352889|gb|EFM17286.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shewanella baltica OS183]
 gi|306913431|gb|EFN43853.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shewanella baltica BA175]
          Length = 372

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 53/192 (27%), Gaps = 10/192 (5%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +        ++  SGG DSS      + +  +VE L     + +     C     + + +
Sbjct: 5   EPTHTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDNNEYCA--AAEDLKD 62

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     + H +      +   +     +A            +  + I F  F    
Sbjct: 63  AQAVCDKLGIKLHTVN--FAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFA 120

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLK 176
              L    I +G                               L  E       P+  L+
Sbjct: 121 DEILDADYIAMGHYVRRRDNSDGSTQMLRGVDGNKDQSYFLYTLSHEQVARSLFPVGELE 180

Query: 177 KYETWKLAQDIG 188
           K+E  ++A+++G
Sbjct: 181 KHEVREIAKEMG 192


>gi|126698878|ref|YP_001087775.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium difficile 630]
 gi|123174593|sp|Q18BE2|MNMA_CLOD6 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|115250315|emb|CAJ68137.1| transfer RNA-specific 2-thiouridylase MnmA [Clostridium difficile]
          Length = 361

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/149 (13%), Positives = 43/149 (28%), Gaps = 2/149 (1%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      ++  SGG DSS        +   V  ++    Q + V      C     VE  
Sbjct: 1   MFMNKKVMIGMSGGVDSSVAAYLLKQQGYDVIGVTMKLWQDDDVVEIEGGCCSLSAVEDA 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            +  + +G    +      ++    +      +  +   PN  +     I        A 
Sbjct: 61  RRVANKIGIPFYV--LNFREVFKEKVIDYFIDEYLEGKTPNPCIACNKHIKFDDFYKKAR 118

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRA 153
           ++G   +  G            R+   ++
Sbjct: 119 QIGCDYVATGHYAKIEKDESTGRYLLKKS 147


>gi|205829088|sp|A7ICB9|MNMA_XANP2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 389

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 45/188 (23%), Gaps = 10/188 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS            V  ++   Y            C  + I +     +
Sbjct: 17  RVVVAMSGGVDSSVVAGLYARAGYDVVGVTLQLYDHGEAAHRRGACCAGQDIYDASEVAR 76

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L            +    A        P   V     +        A  LG 
Sbjct: 77  TLGIPHYVLD---YESRFKEEVIDRFAASYASGVTPIPCVDCNRTVKFRDLLATAEELGA 133

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLKKYETWK 182
             +  G      +     R     A E                  +  PL  ++K +   
Sbjct: 134 RYLATGHYVASRALPDGRRGLYRAAEEARDQSYFLYATTAAQLERLRFPLGEMRKADVRA 193

Query: 183 LAQDIGGQ 190
           LA + G  
Sbjct: 194 LAAEFGLP 201


>gi|167040124|ref|YP_001663109.1| tRNA-specific 2-thiouridylase MnmA [Thermoanaerobacter sp. X514]
 gi|166854364|gb|ABY92773.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacter sp. X514]
          Length = 387

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 53/193 (27%), Gaps = 13/193 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV---ELECRLCVRKKIV 61
           ++      +  SGG DSS        +   V  L+      ++    + +   C  K   
Sbjct: 24  MEINNRVAIGMSGGVDSSVAAYLLKKQGFDVIGLTMRVWVDHEAKAFDSDKSCCSLKATQ 83

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +     +      + + L+ +      +   N          PN  V     I       
Sbjct: 84  DAKKVAEILGIPHYTVDLSKIFYDKIVNYFVNE---YLKGRTPNPCVLCNRQIKFGELLE 140

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMW 174
            A+ LG   I  G            R+        +         L  +       PL  
Sbjct: 141 KAFELGAYYIATGHYVRKEYDEKTKRYLLKKGIDSSKDQSYVLYRLTQKQLEHALFPLGN 200

Query: 175 LKKYETWKLAQDI 187
            KK E   LA+++
Sbjct: 201 YKKEEIRALAEEL 213


>gi|325299223|ref|YP_004259140.1| tRNA-specific 2-thiouridylase mnmA [Bacteroides salanitronis DSM
           18170]
 gi|324318776|gb|ADY36667.1| tRNA-specific 2-thiouridylase mnmA [Bacteroides salanitronis DSM
           18170]
          Length = 379

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 50/189 (26%), Gaps = 8/189 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K    L+  SGG DSS       ++   V  ++                   +I+E  
Sbjct: 1   MTKDKRVLVGMSGGIDSSATCIMLQEQGYEVVGVTMRTWDIPSHFSTPGQEQPDEILEAQ 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                   E H+  +    +     + +    +      PN  V    +         A 
Sbjct: 61  AVAARLGIEHHVADV---REEFRKVIVQYFIDEYMRGRTPNPCVLCNPLFKERILCEWAD 117

Query: 125 RLGITNIVI-GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM----WLKKYE 179
           R G   I     C+ +             A +       +    + + ++     + K +
Sbjct: 118 RTGCQWIATGHYCQIEKRNGWFYIVTGDDATKDQSYFLWKLPQEILSRMLFPLGGMTKDK 177

Query: 180 TWKLAQDIG 188
             +     G
Sbjct: 178 VREYLAHKG 186


>gi|319938290|ref|ZP_08012687.1| hypothetical protein HMPREF9488_03523 [Coprobacillus sp. 29_1]
 gi|319806583|gb|EFW03241.1| hypothetical protein HMPREF9488_03523 [Coprobacillus sp. 29_1]
          Length = 279

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 6/98 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            ALL+ SGG DS       L R   +E + +                R+K+++L+   + 
Sbjct: 178 KALLMLSGGIDSPVAGYLTLKRGVDIECIHY------ASPPYTSDLAREKVLDLVDVLRH 231

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF 107
                  + +    ++  +                  +
Sbjct: 232 YTHGKITVHIVPFTELQLAVYEHCEESYAMTVMRRMMY 269


>gi|154244361|ref|YP_001415319.1| tRNA-specific 2-thiouridylase MnmA [Xanthobacter autotrophicus Py2]
 gi|154158446|gb|ABS65662.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Xanthobacter autotrophicus Py2]
          Length = 436

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 45/188 (23%), Gaps = 10/188 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS            V  ++   Y            C  + I +     +
Sbjct: 64  RVVVAMSGGVDSSVVAGLYARAGYDVVGVTLQLYDHGEAAHRRGACCAGQDIYDASEVAR 123

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L            +    A        P   V     +        A  LG 
Sbjct: 124 TLGIPHYVLD---YESRFKEEVIDRFAASYASGVTPIPCVDCNRTVKFRDLLATAEELGA 180

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLKKYETWK 182
             +  G      +     R     A E                  +  PL  ++K +   
Sbjct: 181 RYLATGHYVASRALPDGRRGLYRAAEEARDQSYFLYATTAAQLERLRFPLGEMRKADVRA 240

Query: 183 LAQDIGGQ 190
           LA + G  
Sbjct: 241 LAAEFGLP 248


>gi|148270897|ref|YP_001245357.1| ExsB family protein [Thermotoga petrophila RKU-1]
 gi|147736441|gb|ABQ47781.1| ExsB family protein [Thermotoga petrophila RKU-1]
          Length = 268

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 55/188 (29%), Gaps = 6/188 (3%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           + +K+    +++FSGG DS+       +   +    L+ D     + E+E    +   I 
Sbjct: 9   EALKEKKKVVVMFSGGVDSTLLAKLTHEALGENSVALTIDSPVIPRKEIEKAKRLAGLIG 68

Query: 62  ELMPKWKDS-LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                 + + L   H++            L  +V       +       G N   L    
Sbjct: 69  IRHEFIELNELKSRHLIENPPDRCYLCRKLRDSVVKNWAKEHGFEVIADGLNFSDLQDYR 128

Query: 121 TLAY---RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                    GI +  I    T        R  ++          + S        + ++K
Sbjct: 129 PGVKASTEDGIWHPFIEFEVTKEEIRDFSRKLSLPTWNKPAMACLCSRFPYGFG-LDMEK 187

Query: 178 YETWKLAQ 185
               + A+
Sbjct: 188 VRMVEAAE 195


>gi|325271122|ref|ZP_08137683.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas sp. TJI-51]
 gi|324103751|gb|EGC01037.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas sp. TJI-51]
          Length = 484

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 57/181 (31%), Gaps = 25/181 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           L+L SGG DS+      + R        F+ G R              ++E+        
Sbjct: 183 LVLMSGGFDSTVAAYQMMRRGLMTHFCFFNLGGRAHELG---------VMEVAHYLWKKY 233

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G    +       +  S   + V  +I +    +        + L  AA +A RL I  +
Sbjct: 234 GSSQRV-------LFISVPFEEVVGEILNKVDNSYMGVTLKRMMLRGAAHMADRLQIDAL 286

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V G   +  S         I +    +         V  PL+   K +    A +IG  D
Sbjct: 287 VTGEAISQVSSQTLPNLSIIDSATDKL---------VLRPLLATHKQDIIDQATEIGTAD 337

Query: 192 L 192
            
Sbjct: 338 F 338


>gi|114706635|ref|ZP_01439536.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fulvimarina pelagi HTCC2506]
 gi|114538027|gb|EAU41150.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fulvimarina pelagi HTCC2506]
          Length = 394

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 51/185 (27%), Gaps = 9/185 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +   D    V  ++   Y   +        C  + I +      
Sbjct: 18  RVIVAMSGGVDSSVTAAILKDEGYDVVGITLQLYDAGDTPAKAGACCAGQDIRDARRVCD 77

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L      +    ++    A        P   V     +        A  LG 
Sbjct: 78  LLGIPHYVLD---YEENFREAVIDPFADAYVAGETPIPCVSCNQTVKFRDLLKTAMDLGG 134

Query: 129 TNI---VIGVCETDYSGYPDCRHDTIRAIETAINLG--MESHVTVHTPLMWLKKYETWKL 183
             +            +     R   +   ++    G   +    +  PL  L K ET ++
Sbjct: 135 DALATGHYIESRKRGNHRSLHRPFDLDRDQSYFLYGTTQKQVDFLRFPLASLTKDETREI 194

Query: 184 AQDIG 188
           A   G
Sbjct: 195 AAKHG 199


>gi|288958853|ref|YP_003449194.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Azospirillum sp. B510]
 gi|288911161|dbj|BAI72650.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Azospirillum sp. B510]
          Length = 391

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 53/198 (26%), Gaps = 13/198 (6%)

Query: 1   MNDI-IKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLC 55
           MN + + K P     ++  SGG DSS   +   +    V  ++   Y     ++     C
Sbjct: 1   MNSLGLSKRPQDTRVVVAMSGGVDSSVTAAVLREEGYDVVGITLQLYDHGLALQKPGACC 60

Query: 56  VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
             + I +            ++L            +  + A        P   V     + 
Sbjct: 61  AGQDIYDARQVADRIGIPHYVLD---YEGRFSQDVMDDFADSYLRGETPIPCVRCNQRVK 117

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDT-----IRAIETAINLGMESHVTVHT 170
                  A  LG   +  G      +G                         E    +  
Sbjct: 118 FRDLLNTARDLGADALATGHYVRRIAGPRGAELHRAVDPAKDQSYFLFATTREQLEFLRF 177

Query: 171 PLMWLKKYETWKLAQDIG 188
           PL  L K ET  LA   G
Sbjct: 178 PLGGLTKPETRALAGRHG 195


>gi|187478638|ref|YP_786662.1| tRNA-specific 2-thiouridylase MnmA [Bordetella avium 197N]
 gi|123514648|sp|Q2KZ71|MNMA_BORA1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|115423224|emb|CAJ49755.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bordetella avium 197N]
          Length = 370

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 50/197 (25%), Gaps = 14/197 (7%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M   ++K    ++  SGG DSS        +   V  L     + +     C     + +
Sbjct: 1   MVQTLQKKGRVVVGMSGGVDSSVTAWLLKQQGYEVVGLFMKNWEDDDDSEYCSTR--QDL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           ++          E   +            +  +   +      PN  V     I      
Sbjct: 59  LDAASVADLIGVEFEYVN---FASEYKDRVFADFLREYSAGRTPNPDVLCNAEIKFKAFL 115

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTI---------RAIETAINLGMESHVTVHTP 171
             A  LG  +I  G      +                           L          P
Sbjct: 116 DHAMSLGAEHIATGHYARVRAVDTARGQRFQLLKALDASKDQSYFLHRLNQAQLSRTLFP 175

Query: 172 LMWLKKYETWKLAQDIG 188
           L  L K E  ++A +IG
Sbjct: 176 LGELHKTEVRRIAHEIG 192


>gi|313501021|gb|ADR62387.1| ThiI [Pseudomonas putida BIRD-1]
          Length = 484

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 57/181 (31%), Gaps = 25/181 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           L+L SGG DS+      + R        F+ G R              ++E+        
Sbjct: 183 LVLMSGGFDSTVAAYQMMRRGLMTHFCFFNLGGRAHELG---------VMEVAHYLWKKY 233

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G    +       +  S   + V  +I +    +        + L  AA +A RL I  +
Sbjct: 234 GSSQRV-------LFISVPFEEVVGEILNKVDNSYMGVTLKRMMLRGAAHMADRLQIDAL 286

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V G   +  S         I +    +         V  PL+   K +    A +IG  D
Sbjct: 287 VTGEAISQVSSQTLPNLSIIDSATDKL---------VLRPLLASHKQDIIDQATEIGTAD 337

Query: 192 L 192
            
Sbjct: 338 F 338


>gi|296451277|ref|ZP_06893017.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium difficile NAP08]
 gi|296880371|ref|ZP_06904334.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium difficile NAP07]
 gi|296259883|gb|EFH06738.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium difficile NAP08]
 gi|296428612|gb|EFH14496.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium difficile NAP07]
          Length = 361

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 44/150 (29%), Gaps = 4/150 (2%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-RNKVELECRLCVRKKIVEL 63
           +      ++  SGG DSS        +   V  ++    Q  + VE+E   C    + + 
Sbjct: 1   MFMNKKVMIGMSGGVDSSVAAYLLKQQGYDVIGVTMKLWQDDDDVEIEGGCCSLSAVEDA 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      ++L      ++    +      +  +   PN  +     I        A
Sbjct: 61  RRVANKIGIPFYVLN---FREVFKEKVIDYFIDEYLEGKTPNPCIACNKHIKFDDFYKKA 117

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRA 153
            ++G   +  G            R+   ++
Sbjct: 118 RQIGCDYVATGHYAKIEKDESTGRYLLKKS 147


>gi|289208556|ref|YP_003460622.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thioalkalivibrio sp. K90mix]
 gi|288944187|gb|ADC71886.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Thioalkalivibrio sp. K90mix]
          Length = 493

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 62/183 (33%), Gaps = 25/183 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++L SGG DS+    + + R   V+ +  + G    V  E  L V +++V        
Sbjct: 178 RAMVLISGGFDSAVAAWYIMRRGTAVDFVFCNLGG--TVHEEMVLAVCRRLV-------- 227

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     A +     S     V   ++     + +      +    A  +A   G  
Sbjct: 228 ------SDWGAGIRPRMFSVDFSGVVDDLRAKVPGDAWQIVLKRLMYRAAEPIARERGAE 281

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G   +  S       +TI A          + + V  PL+   K E    A+ IG 
Sbjct: 282 ALVTGEALSQVSSQTLSNLETIDAA---------ADLPVLRPLIGFDKTEIMNRARAIGT 332

Query: 190 QDL 192
            +L
Sbjct: 333 FEL 335


>gi|16759402|ref|NP_455019.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29142826|ref|NP_806168.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|213052897|ref|ZP_03345775.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213427860|ref|ZP_03360610.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213585097|ref|ZP_03366923.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213647261|ref|ZP_03377314.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213855373|ref|ZP_03383613.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|289825068|ref|ZP_06544420.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|20140619|sp|Q8Z8X1|THII_SALTI RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|25513295|pir||AI0554 thiamin biosynthesis protein ThiI [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16501693|emb|CAD08881.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29138458|gb|AAO70028.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
          Length = 482

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 57/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DSS      + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSSVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|219669597|ref|YP_002460032.1| tRNA-specific 2-thiouridylase MnmA [Desulfitobacterium hafniense
           DCB-2]
 gi|219539857|gb|ACL21596.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Desulfitobacterium hafniense DCB-2]
          Length = 370

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 52/202 (25%), Gaps = 16/202 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL---SFDYGQRNKVELECRLCVRKKIV 61
           + +    ++  SGG DSS   +   +    V  +   +   G  + V   C +       
Sbjct: 3   LTEKKKVVVGMSGGVDSSMAAALLKEEGYEVIGITLQTMPSGGPDDVGGCCSITAIDDAR 62

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
            +  +        ++L    + + +      N  +  +  N                   
Sbjct: 63  RVAHQLG---IPHYVLNFRTIFEENVIDYFTNAYLSGETPNPCTMCNRVVRWGEF---LR 116

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMW 174
            A  LG   +  G            R+                 NL  +       PL  
Sbjct: 117 KARALGADYLATGHYAKILQDPDSGRYLMSRPVDTWKDQTYMLYNLTQDQLKHTLFPLAD 176

Query: 175 LKKYETWKLAQDIGGQDLVNLI 196
            KK    ++A + G   +    
Sbjct: 177 YKKEHIREMAAERGLLRVSRKP 198


>gi|261346011|ref|ZP_05973655.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Providencia rustigianii DSM 4541]
 gi|282565896|gb|EFB71431.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Providencia rustigianii DSM 4541]
          Length = 373

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 55/197 (27%), Gaps = 13/197 (6%)

Query: 1   MNDIIKKAP----SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
           M+D   K+       ++  SGG DSS        +  +V  L     + +  E  C    
Sbjct: 1   MSDNSTKSDNSQIKVIVGMSGGVDSSVSAYLLQQQGYQVVGLFMKNWEEDDDEEYCS--A 58

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
              + +          E   +      +   +     +             +  + I F 
Sbjct: 59  ATDLADAQAVCDKLGIELRTIN--FAAEYWDNVFEHFLEEYKAGRTPNPDILCNKEIKFK 116

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTP 171
            F    A  LG   I  G            +      +          L  E       P
Sbjct: 117 AFLEFAAEDLGADYIATGHYVRRRDVNGKSQLLRGLDNNKDQSYFLYTLSHEQIAKSLFP 176

Query: 172 LMWLKKYETWKLAQDIG 188
           +  L+K E  ++A++IG
Sbjct: 177 VGELEKPEVRRIAEEIG 193


>gi|117617943|ref|YP_855954.1| tRNA-specific 2-thiouridylase MnmA [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|166234841|sp|A0KI53|MNMA_AERHH RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|117559350|gb|ABK36298.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
          Length = 368

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 50/183 (27%), Gaps = 9/183 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS        +  +VE L     + +  +  C     + + +       
Sbjct: 8   KVIVGMSGGVDSSVSAYLLQQQGYQVEGLFMKNWEEDDTDEYCS--AAQDLADAKAVCDK 65

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              + H +      +   +     +             +  + I F  F    A  LG T
Sbjct: 66  LGMKLHTIN--FAAEYWDNVFEHFLEEYKAGRTPNPDILCNKEIKFKAFLEFAAEELGAT 123

Query: 130 NIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            I  G            R                 L          P+  L+K E  ++A
Sbjct: 124 YIATGHYVRRDDSTGRPRLLRGLDTNKDQSYFLYTLSEAQVGQSLFPVGDLEKPEVRRIA 183

Query: 185 QDI 187
           + +
Sbjct: 184 EQL 186


>gi|291085764|ref|ZP_06571184.1| thiamine biosynthesis/tRNA modification protein ThiI [Citrobacter
           youngae ATCC 29220]
 gi|291069782|gb|EFE07891.1| thiamine biosynthesis/tRNA modification protein ThiI [Citrobacter
           youngae ATCC 29220]
          Length = 526

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 57/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 224 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 274

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 275 FGSSHRVRFIAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 327

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA++IG +
Sbjct: 328 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISHDKEHIINLAREIGTE 378

Query: 191 DL 192
           D 
Sbjct: 379 DF 380


>gi|109898694|ref|YP_661949.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudoalteromonas atlantica T6c]
 gi|122971887|sp|Q15T93|MNMA_PSEA6 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|109700975|gb|ABG40895.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudoalteromonas atlantica T6c]
          Length = 396

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 50/188 (26%), Gaps = 9/188 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS      L +  +VE L     + +  +  C       + +   
Sbjct: 34  NSQKKVIVGMSGGVDSSVSAYILLQQGYQVEGLFMKNWEEDDNDEYCA--AADDLKDAQA 91

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    H +      +   +     +             +  + I F  F    A  
Sbjct: 92  VADKLGIVLHQIN--FAAEYWDNVFEYFLEEYKSGRTPNPDIMCNKEIKFKAFLEFAAEE 149

Query: 126 LGITNIVIGVCETDYSGYPD-----CRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           L    I  G                   D          LG +       P+  ++K + 
Sbjct: 150 LEADYIATGHYVRRREVDGHWQMLRGMDDNKDQSYFLYTLGEQHVGQTLFPIGDIEKPQV 209

Query: 181 WKLAQDIG 188
            ++AQ+ G
Sbjct: 210 REIAQEQG 217


>gi|26991721|ref|NP_747146.1| thiamine biosynthesis protein ThiI [Pseudomonas putida KT2440]
 gi|148550121|ref|YP_001270223.1| thiamine biosynthesis protein ThiI [Pseudomonas putida F1]
 gi|37999608|sp|Q88CY4|THII_PSEPK RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|24986825|gb|AAN70610.1|AE016704_1 thiamine biosynthesis protein ThiI [Pseudomonas putida KT2440]
 gi|148514179|gb|ABQ81039.1| thiamine biosynthesis/tRNA modification protein ThiI [Pseudomonas
           putida F1]
          Length = 484

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 57/181 (31%), Gaps = 25/181 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           L+L SGG DS+      + R        F+ G R              ++E+        
Sbjct: 183 LVLMSGGFDSTVAAYQMMRRGLMTHFCFFNLGGRAHELG---------VMEVAHYLWKKY 233

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G    +       +  S   + V  +I +    +        + L  AA +A RL I  +
Sbjct: 234 GSSQRV-------LFISVPFEEVVGEILNKVDNSYMGVTLKRMMLRGAAHMADRLQIDAL 286

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V G   +  S         I +    +         V  PL+   K +    A +IG  D
Sbjct: 287 VTGEAISQVSSQTLPNLSIIDSATDKL---------VLRPLLASHKQDIIDQATEIGTAD 337

Query: 192 L 192
            
Sbjct: 338 F 338


>gi|253583302|ref|ZP_04860500.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium varium ATCC 27725]
 gi|251833874|gb|EES62437.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium varium ATCC 27725]
          Length = 346

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 49/193 (25%), Gaps = 12/193 (6%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS            V  ++ +    +K E      ++ +I       
Sbjct: 3   RKKVVIGMSGGVDSSVAAYLLKSEGYGVIGVTLN----HKKE----ESLKDEIKAAQRIC 54

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA----TLA 123
                E  I+ +  L              +    +          +  L   A       
Sbjct: 55  HFLGIEHKIIDIEELFQKEVIDDFLEGYSQGITPSPCVICDEKVKMKILFEIADKENADF 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              G  + V    E   S                  L  +    +  PL   +K +   +
Sbjct: 115 VATGHYSSVEYSEEFKTSLLKVSYDPRKDQSYMLYRLDNDKISRLLFPLHSYEKKQIRDI 174

Query: 184 AQDIGGQDLVNLI 196
           A++IG +      
Sbjct: 175 AKNIGLEVYNKKD 187


>gi|281422007|ref|ZP_06253006.1| conserved hypothetical protein [Prevotella copri DSM 18205]
 gi|281403965|gb|EFB34645.1| conserved hypothetical protein [Prevotella copri DSM 18205]
          Length = 473

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/232 (13%), Positives = 63/232 (27%), Gaps = 21/232 (9%)

Query: 12  LLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           + LFSGG DS          L    ++  +S     +   + +  L   ++      K+ 
Sbjct: 147 VALFSGGLDSLIGFIDETNTLSVNKKILLVSHMELGKEHCDQKSILGYCRENNIFQNKF- 205

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF--AATLAYRL 126
                + +L  A L   S +          +  +L            +       +    
Sbjct: 206 -----EQVLLNAGLKPKSWNVKGTPSESTFRSRSLLFFAAGIYVAHKMSPNTPLIVPENG 260

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ- 185
            I+  +        +      H T           +  + T + P     K +  K    
Sbjct: 261 TISINIPLDSGRRSACSTRTTHPTFIKRIQEALQLVGINNTFYNPYRLKSKADMMKDCDN 320

Query: 186 DIGGQDLVNLILEESHTCYL---------GKRDKRYEWGYGCNSCPACYLRQ 228
           D+    ++  +  +S +C                R +    C  C  C  R+
Sbjct: 321 DVNKSVILRQLYSKSCSCAKRGHNSHWDKPGDVIRNKKITHCGMCLPCLYRR 372


>gi|241206171|ref|YP_002977267.1| tRNA-specific 2-thiouridylase MnmA [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240860061|gb|ACS57728.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 403

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 48/190 (25%), Gaps = 14/190 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS        +   V  ++   Y     V      C  + I +     +
Sbjct: 18  RVVVAMSGGVDSSVVAGLLKQQGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 77

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++    A        P   V     +        A  LG 
Sbjct: 78  TLGIPHYVLD---YEKRFRETVINPFAESYVAGETPIPCVSCNQTVKFADLLATAKELGA 134

Query: 129 TNIVIGVCETDYSGYPDCRH----------DTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             +  G                                      E    +  PL  L K 
Sbjct: 135 DALATGHYIRSGRNPSPDNPGRRALFRPADADRDQSYFLFATTQEQIDYLRFPLGGLPKA 194

Query: 179 ETWKLAQDIG 188
           ET +LA+++G
Sbjct: 195 ETRRLAEEMG 204


>gi|260172511|ref|ZP_05758923.1| tRNA-specific 2-thiouridylase MnmA [Bacteroides sp. D2]
          Length = 385

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 52/187 (27%), Gaps = 10/187 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIV 61
           ++++    LL  SGG DSS      L+    V  ++F + + N      E    + +++ 
Sbjct: 1   MMEENKRVLLGMSGGTDSSVAAMRLLEAGYEVIGVTFRFYELNGSTEYLEDARNLAERLG 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                +         +    + +      T        +           + + + + AT
Sbjct: 61  IRHITYDAREIFSKQIIEYFVQEYLAG-RTPVPCTLCNNYLKWPLLAKIADEMGIFYIAT 119

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
             Y   I                D         +  +         +  P+  + K E  
Sbjct: 120 GHYAQNIQLNNTFYITYAADSDKDQTFFLWGLKQDILC-------RMLLPMGDITKVEAR 172

Query: 182 KLAQDIG 188
             A + G
Sbjct: 173 VWAAEHG 179


>gi|291526521|emb|CBK92108.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Eubacterium rectale DSM 17629]
          Length = 362

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/212 (11%), Positives = 55/212 (25%), Gaps = 8/212 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS       ++   V  ++    Q   V  + +      +  +   
Sbjct: 1   MKKKVVVGMSGGVDSSVAAYLLKEQGYDVIGVTMQIWQDEDVFKQSQEGGCCGLSAVEDA 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            + +   D    +          +      + +    PN  +     +        +  +
Sbjct: 61  RRVAAVLDIPYYVMNFKADFKKYVIDYFVSEYERAYTPNPCIACNRYVKWESLLHRSLEI 120

Query: 127 GITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           G   I  G                              NL  E       P+   +K + 
Sbjct: 121 GADYIATGHYARIAQLPNGRYTIANSVTAEKDQTYALYNLTQEQLRRTLMPVGEYEKPQI 180

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRY 212
            ++A++ G         ++   C++   D   
Sbjct: 181 RRIAEEAGLPVAHKSDSQDI--CFVPDHDYAS 210


>gi|116253697|ref|YP_769535.1| tRNA-specific 2-thiouridylase MnmA [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|205816894|sp|Q1MC84|MNMA_RHIL3 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|115258345|emb|CAK09447.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhizobium leguminosarum bv. viciae 3841]
          Length = 408

 Score = 59.5 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 48/190 (25%), Gaps = 14/190 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS        +   V  ++   Y     V      C  + I +     +
Sbjct: 23  RVVVAMSGGVDSSVVAGLLKQQGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 82

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++    A        P   V     +        A  LG 
Sbjct: 83  TLGIPHYVLD---YEKRFRETVINPFAESYVAGETPIPCVSCNQTVKFADLLATAKELGA 139

Query: 129 TNIVIGVCETDYSGYPDCRH----------DTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             +  G                                      E    +  PL  L K 
Sbjct: 140 DALATGHYIRSGRNPSPENPGRRALFRPADADRDQSYFLFATTQEQIDYLRFPLGGLPKA 199

Query: 179 ETWKLAQDIG 188
           ET +LA+++G
Sbjct: 200 ETRRLAEEMG 209


>gi|146310551|ref|YP_001175625.1| thiamine biosynthesis protein ThiI [Enterobacter sp. 638]
 gi|145317427|gb|ABP59574.1| [ThiS-adenylate] sulfurtransferase [Enterobacter sp. 638]
          Length = 515

 Score = 59.2 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++       
Sbjct: 213 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWKR 263

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 264 FGSSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASQVAERYGVQA 316

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     +A++IG +
Sbjct: 317 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISHDKEHIIDMAREIGTE 367

Query: 191 DL 192
           D 
Sbjct: 368 DF 369


>gi|327266954|ref|XP_003218268.1| PREDICTED: GMP synthase [glutamine-hydrolyzing]-like [Anolis
           carolinensis]
          Length = 707

 Score = 59.2 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 58/197 (29%), Gaps = 11/197 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIV---- 61
           +   L+L SGG DS+ C +        D+V  +  D G   K E +      KK+     
Sbjct: 250 SSKVLVLLSGGVDSTVCTALLNRALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVK 309

Query: 62  -ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP--NTFVPGRNIIFLVF 118
                 W  +      +           S T N+    ++      +TFV   N +    
Sbjct: 310 VVNAAHWFYNGTTTLPISEEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEM 369

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLK 176
                        +        S     + + I+       L         V  PL    
Sbjct: 370 NLKPEEVFLAQGTLRPDLIESASVVASGKAEVIKTHHNDTELIRKLREEGKVIEPLKDFH 429

Query: 177 KYETWKLAQDIGGQDLV 193
           K E   L +++G  + +
Sbjct: 430 KDEVRVLGRELGLPEEL 446


>gi|50365230|ref|YP_053655.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mesoplasma florum L1]
 gi|81612889|sp|Q6F152|MNMA_MESFL RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|50363786|gb|AAT75771.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mesoplasma florum L1]
          Length = 374

 Score = 59.2 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 59/197 (29%), Gaps = 17/197 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCV-------RK 58
                ++  SGG DSS      + +   VE L   ++      ++     +        +
Sbjct: 1   MKKKVIVGLSGGVDSSVAAYLLIQQGYEVEGLFMRNWDSSANNDILGNQEIDNDVCPQEQ 60

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
             ++ +        + H +    + +         +    +        +  + I F  F
Sbjct: 61  DYLDALEVANKLGIKLHRID--FVQEYWEYVFEYFIKEYKKGRTPNPDILCNKYIKFDKF 118

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH-------TP 171
                  L    I +G            +++ IRA++T  +                  P
Sbjct: 119 LNHAINELKADYIAMGHYAGVRFNEKTKQYEMIRAVDTNKDQTYFLCQLTQNQLSKTLFP 178

Query: 172 LMWLKKYETWKLAQDIG 188
           L  L+K E  K+A + G
Sbjct: 179 LQSLEKPEIRKIAAEQG 195


>gi|292670858|ref|ZP_06604284.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Selenomonas noxia ATCC 43541]
 gi|292647479|gb|EFF65451.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Selenomonas noxia ATCC 43541]
          Length = 365

 Score = 59.2 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 56/195 (28%), Gaps = 12/195 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--QRNKVELECRLCVRK 58
           M   +KK    ++  SGG DSS   +   +R   V  ++       R+    +   C   
Sbjct: 1   MERKMKK-ERVVVAMSGGVDSSLAAALLQERGYDVVGVTMRLSAENRDAPSNDRSCCSLI 59

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
            + +            +++      +    ++      +      PN  +     I    
Sbjct: 60  SVDDARRVADVLGIPHYVMD---FTEPFQHAVIDYFFNEYLHGRTPNPCIACNRFIKFEG 116

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDT------IRAIETAINLGMESHVTVHTPL 172
               +  LG + I  G       G                      ++  E    V  PL
Sbjct: 117 LLHKSKELGASYIATGHYARIDHGKDGTYRLRKGLDLEKDQSYVLYHMNQEILAHVLLPL 176

Query: 173 MWLKKYETWKLAQDI 187
               K+ET ++A+  
Sbjct: 177 GVFSKHETRRMAEQY 191


>gi|238922734|ref|YP_002936247.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Eubacterium rectale ATCC 33656]
 gi|238874406|gb|ACR74113.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Eubacterium rectale ATCC 33656]
          Length = 362

 Score = 59.2 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/212 (11%), Positives = 55/212 (25%), Gaps = 8/212 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS       ++   V  ++    Q   V  + +      +  +   
Sbjct: 1   MKKKVVVGMSGGVDSSVAAYLLKEQGYDVIGVTMQIWQDEDVFKQSQEGGCCGLSAVEDA 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            + +   D    +          +      + +    PN  +     +        +  +
Sbjct: 61  RRVAAVLDIPYYVMNFKADFKKYVIDYFVSEYERAYTPNPCIACNRYVKWESLLHRSLEI 120

Query: 127 GITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           G   I  G                              NL  E       P+   +K + 
Sbjct: 121 GADYIATGHYARIAQLPNGRYTIANSVTAEKDQTYALYNLTQEQLRRTLMPVGEYEKPQI 180

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRY 212
            ++A++ G         ++   C++   D   
Sbjct: 181 RRIAEEAGLPVAHKSDSQDI--CFVPDHDYAS 210


>gi|315637436|ref|ZP_07892648.1| thiamine biosynthesis protein ThiI [Arcobacter butzleri JV22]
 gi|315478273|gb|EFU68994.1| thiamine biosynthesis protein ThiI [Arcobacter butzleri JV22]
          Length = 488

 Score = 59.2 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 58/180 (32%), Gaps = 25/180 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           S + L SGG DS+      + R  +   + F+ G            +   + ++     +
Sbjct: 189 SVISLMSGGFDSTVASYLTMKRGIKTHFIFFNLGGL-------AHEI--GVKQVAYYLWN 239

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G  H +          S   ++V  +I  +            + L+ +  +A  LGI 
Sbjct: 240 KFGSSHRVSFI-------SVPFEDVVSQIFKDVSQPYMGVMLKRLMLLASEKIADSLGID 292

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      S         I      +         V  PL  + K +  ++AQ IG 
Sbjct: 293 ALVTGESVAQVSSQTLRNLALIDQCTNKL---------VLRPLSMMSKPDIIEIAQKIGT 343


>gi|307700537|ref|ZP_07637571.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mobiluncus mulieris FB024-16]
 gi|307614258|gb|EFN93493.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mobiluncus mulieris FB024-16]
          Length = 394

 Score = 59.2 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/194 (10%), Positives = 46/194 (23%), Gaps = 4/194 (2%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY--GQRNKVELECRLCV--RKKIVE 62
            +   ++  SGG DS+   +  L++   V           R++        +   +K+  
Sbjct: 1   MSKKVIIGLSGGVDSAVAAARLLEQGYDVHAFFMKLEESGRDEENNPTAQALADARKVAA 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
            +    +      ++     G I+         +        N       ++        
Sbjct: 61  YLGIPPEKFHVWELVDRFERGVITPFVEAYASGLTPNPCVRCNRVFKFGYVVERALREGF 120

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
            Y        +      +        +  ++   A          +        K ET  
Sbjct: 121 DYVATGHYACLDHIGDGFRLRRGASLEKDQSYVLAGARAEMLAHAIFPLFDVRDKAETRA 180

Query: 183 LAQDIGGQDLVNLI 196
            AQ  G        
Sbjct: 181 EAQRRGLPVAHKRD 194


>gi|307131188|ref|YP_003883204.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Dickeya dadantii 3937]
 gi|306528717|gb|ADM98647.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Dickeya dadantii 3937]
          Length = 370

 Score = 59.2 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 52/192 (27%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  RVE L     + +     C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYRVEGLFMKNWEEDDDTEYCS--AATDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +A            +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIELHTVN--FAAEYWDNVFEHFLAEYRAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G            R                 L  +       P+  L
Sbjct: 115 FAAEDLGADYIATGHYVRRKDVDGKSRLLRGLDGNKDQSYFLYTLSHQQLAQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K +  ++A+ +
Sbjct: 175 EKPQVREIAEQL 186


>gi|291527010|emb|CBK92596.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Eubacterium rectale M104/1]
          Length = 362

 Score = 59.2 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/212 (11%), Positives = 55/212 (25%), Gaps = 8/212 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS       ++   V  ++    Q   V  + +      +  +   
Sbjct: 1   MKKKVVVGMSGGVDSSVAAYLLKEQGYDVIGVTMQIWQDEDVFKQSQEGGCCGLSAVEDA 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            + +   D    +          +      + +    PN  +     +        +  +
Sbjct: 61  RRVAAVLDIPYYVMNFKADFKKYVIDYFVSEYERAYTPNPCIACNRYVKWESLLHRSLEI 120

Query: 127 GITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           G   I  G                              NL  E       P+   +K + 
Sbjct: 121 GADYIATGHYARIAQLPNGRYTIANSVTAEKDQTYALYNLTQEQLRRTLMPVGEYEKPQI 180

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRY 212
            ++A++ G         ++   C++   D   
Sbjct: 181 RRIAEEAGLPVAHKSDSQDI--CFVPDHDYAS 210


>gi|157737660|ref|YP_001490343.1| thiamine biosynthesis protein ThiI [Arcobacter butzleri RM4018]
 gi|157699514|gb|ABV67674.1| thiamine biosynthesis protein ThiI [Arcobacter butzleri RM4018]
          Length = 488

 Score = 59.2 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 58/180 (32%), Gaps = 25/180 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           S + L SGG DS+      + R  +   + F+ G            +   + ++     +
Sbjct: 189 SVISLMSGGFDSTVASYLTMKRGIKTHFIFFNLGGL-------AHEI--GVKQVAYYLWN 239

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G  H +          S   ++V  +I  +            + L+ +  +A  LGI 
Sbjct: 240 KFGSSHRVSFI-------SVPFEDVVSQIFKDVSQPYMGVMLKRLMLLASEKIADSLGID 292

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      S         I      +         V  PL  + K +  ++AQ IG 
Sbjct: 293 ALVTGESVAQVSSQTLRNLALIDQCTNKL---------VLRPLSMMSKPDIIEIAQKIGT 343


>gi|254503485|ref|ZP_05115636.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Labrenzia alexandrii DFL-11]
 gi|222439556|gb|EEE46235.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Labrenzia alexandrii DFL-11]
          Length = 449

 Score = 59.2 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 45/185 (24%), Gaps = 9/185 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +        V  ++   Y     V      C    I +     +
Sbjct: 72  RVVVAMSGGVDSSVVAAMMHAEGYDVIGVTLQLYDHGAAVAKTKSCCAGVDIHDARRAAE 131

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L               +  +  +        V     +        A  LG 
Sbjct: 132 KIGIPHYVLDYESRFKEQVMDRFADSYIAGETPIPC---VSCNQTVKFTDLLKTARDLGA 188

Query: 129 TNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +     V    + +                       E    V  PL  + K +   L
Sbjct: 189 DALATGHYVRSATKGNKRALFRPADLDRDQSYFLFATTQEQLDFVRFPLGGMPKSQVRTL 248

Query: 184 AQDIG 188
           A++ G
Sbjct: 249 AEEFG 253


>gi|188997646|ref|YP_001931897.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932713|gb|ACD67343.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 352

 Score = 59.2 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 60/184 (32%), Gaps = 9/184 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSST       +   V  +S  +   +  EL+ ++C   K +    K  
Sbjct: 2   KKIVVGLSGGVDSSTAAFLLKKQGYEVVGISLKFTDIDSCELDTQVCCSDKDILDAKKVA 61

Query: 69  DSL-GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           + L    +++    + +    +    V    Q    PN        +     A     LG
Sbjct: 62  EFLEIPHYVINWKDIFEKKVINYFIEV---YQSGLTPNPCSICNKEVKTGLFAKYIKSLG 118

Query: 128 ITNI---VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYETWK 182
              +        +         R       ++     +E  V  T+  PL  L K E  K
Sbjct: 119 FDYLATGHYIRTDIQDGIKVLKRGIDKNKDQSYFMALVEKEVVDTLTFPLGNLTKEEVRK 178

Query: 183 LAQD 186
           +AQ+
Sbjct: 179 IAQE 182


>gi|157825546|ref|YP_001493266.1| tRNA-specific 2-thiouridylase MnmA [Rickettsia akari str. Hartford]
 gi|166235076|sp|A8GMY3|MNMA_RICAH RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|157799504|gb|ABV74758.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rickettsia akari str. Hartford]
          Length = 365

 Score = 59.2 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 56/194 (28%), Gaps = 9/194 (4%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKK 59
           M ++  K  + ++  SGG DSS   +   ++   V  ++   Y     V  +   C  + 
Sbjct: 1   MINLGDKHSTIVVAMSGGVDSSAVAAMLHEQGHNVIGITLQLYDHGMAVGKKNACCAGQD 60

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           I +            ++L           S+  N          P   V   N +     
Sbjct: 61  IYDAKMVANKLGIPHYVLD---YESKFKESVIDNFVDSYLQGETPLPCVQCNNSVKFRDL 117

Query: 120 ATLAYRLGITNIVIGVCETDYSGY-----PDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
              A  LG + +  G      SG                         E    +  PL W
Sbjct: 118 IKTARELGASQLATGHYVRKVSGDNGVELHTGLDPAKDQSYFLFTTTKEQLEYLSFPLGW 177

Query: 175 LKKYETWKLAQDIG 188
             K ET KLA   G
Sbjct: 178 FTKDETRKLASKFG 191


>gi|304413559|ref|ZP_07395032.1| putative tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase [Candidatus Regiella insecticola LSR1]
 gi|304284402|gb|EFL92795.1| putative tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase [Candidatus Regiella insecticola LSR1]
          Length = 367

 Score = 59.2 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 51/192 (26%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +V  L        + + +      K +
Sbjct: 1   MSD--HSQKKIIVGMSGGVDSSVAAYLLKQQGYQVAGLFMK--NWEEDDNDTYCGAAKDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +            H +      +   +     +A            +  + I F  F +
Sbjct: 57  ADAQAVCDKLNINLHRVN--FAAEYWDNVFKLFLAEYQAGRTPNPDILCNKEIKFNAFLS 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
                L    I  G     ++            D          L  +       P+  L
Sbjct: 115 FACEELEADYIATGHYVRRHTSAGKNCLLRGLDDNKDQSYFLYTLNQQQLARSLFPIGDL 174

Query: 176 KKYETWKLAQDI 187
           KK E   +A+ +
Sbjct: 175 KKSEVRNIAEQL 186


>gi|290474682|ref|YP_003467562.1| sulfur transfer protein (from cys to ThiS and from IscS to U8-tRNA)
           [Xenorhabdus bovienii SS-2004]
 gi|289173995|emb|CBJ80782.1| sulfur transfer protein (from cys to ThiS and from IscS to U8-tRNA)
           [Xenorhabdus bovienii SS-2004]
          Length = 482

 Score = 59.2 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 57/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------SAHEI--GVKQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  ++ +A R G+  
Sbjct: 231 FGSSHKVRFVAI-------DFEPVVAEILEKVDDGQMGVVLKRMMVRASSRIAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I      +         +  PL+   K    KLA++IG +
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIIKLAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|257125929|ref|YP_003164043.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Leptotrichia buccalis C-1013-b]
 gi|257049868|gb|ACV39052.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Leptotrichia buccalis C-1013-b]
          Length = 364

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/187 (11%), Positives = 53/187 (28%), Gaps = 4/187 (2%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVEL 63
           +++    +L  SGG DSS       ++   V  +   ++ ++++  +       K ++ +
Sbjct: 1   MERRKKVVLGMSGGVDSSVAAILLKEQGYDVIGVFMKNWEEKDENGVCMAEEDYKDVIAV 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-- 121
             +        + +        ++             + + N  +  R  +         
Sbjct: 61  AEQLGIPYYSVNFVKEYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFRAFLDYAMKIGAD 120

Query: 122 -LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            +A       I         S       D          L  E    V  PL    K + 
Sbjct: 121 YVATGHYARIIHEEKDGEMKSTMLRGIDDNKDQTYFLCQLNQEQLEKVLFPLGEYTKPKI 180

Query: 181 WKLAQDI 187
            ++A+  
Sbjct: 181 REIAEKY 187


>gi|162447421|ref|YP_001620553.1| tRNA-specific 2-thiouridylase MnmA [Acholeplasma laidlawii PG-8A]
 gi|205810979|sp|A9NFP7|MNMA_ACHLI RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|161985528|gb|ABX81177.1| tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase
           [Acholeplasma laidlawii PG-8A]
          Length = 375

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 44/191 (23%), Gaps = 10/191 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL--------CVRK 58
                L+  SGG DSS      L +   VE +                           K
Sbjct: 1   MKKKVLIGLSGGVDSSVAALILLQQGYDVEAVFMRNWDSATNMDFRGNPTLYDETCEQEK 60

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
              + +        + H +           S   +   K +  N              + 
Sbjct: 61  DYQDALKVANKLGIKLHRVDFIHEYWDRVFSYFIDEYEKNRTPNPDVLCNNEIKFKAFID 120

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLK 176
            +       I        +         R       +T     L  E    V  P+  L 
Sbjct: 121 YSEKFKPDYIAMGHYAQIDHTGDEPKLIRAVDSNKDQTYFLSQLKTEQLRNVLFPIGNLP 180

Query: 177 KYETWKLAQDI 187
           K E  ++A++ 
Sbjct: 181 KSEVRRIAKEH 191


>gi|242399054|ref|YP_002994478.1| hypothetical protein TSIB_1075 [Thermococcus sibiricus MM 739]
 gi|242265447|gb|ACS90129.1| hypothetical protein TSIB_1075 [Thermococcus sibiricus MM 739]
          Length = 485

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/220 (9%), Positives = 51/220 (23%), Gaps = 12/220 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
               ++ SGG++S        +    V    F+    +           +K      K  
Sbjct: 148 NKCAVMLSGGKESLLTYGLLKEIGCDVYPFFFNESGGHWKVALTAYKWFEKNESNTKKVW 207

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            ++   +    + +  +    + K  A                 +  +         LG 
Sbjct: 208 SNVDRLYNFIESNMKILQ--DVNKPKAEVYPIRLFFFEHYIFSFLPLIYKYNIGNVLLGN 265

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                     +  G P       ++      +             W       +    + 
Sbjct: 266 EYDDPRNLSYEQQGIPHFYAVFDQSQYFDKYMSQWFAKRSLKIRQWSA----VRPLSGLI 321

Query: 189 GQDLVNLILEE----SHTCYLGKRDKRYEWGYGCNSCPAC 224
            + +++    +      +C+     K       C +C  C
Sbjct: 322 VERILHNRYPDLFMLQRSCHS--VHKEGNEYVPCGTCFKC 359


>gi|240104187|ref|YP_002960496.1| PP-loop ATPase, YdaO-type [Thermococcus gammatolerans EJ3]
 gi|239911741|gb|ACS34632.1| PP-loop ATPase, YdaO-type [Thermococcus gammatolerans EJ3]
          Length = 304

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 24/69 (34%), Gaps = 2/69 (2%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKK 59
             ++K     L++ SGG+DS+            +E L  + G     E   E      + 
Sbjct: 41  YKMLKPDEKVLVVVSGGKDSAVTAYILKKLGYNIECLHINLGIGEYSEKSEEYAKKQCEA 100

Query: 60  IVELMPKWK 68
           +   +   +
Sbjct: 101 LEVPLHIVR 109


>gi|237736558|ref|ZP_04567039.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium mortiferum ATCC 9817]
 gi|229420420|gb|EEO35467.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium mortiferum ATCC 9817]
          Length = 352

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/189 (11%), Positives = 57/189 (30%), Gaps = 18/189 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                +L  SGG DSS  +     +   V  ++ +    +K E      ++++I      
Sbjct: 2   NRKKVVLGMSGGVDSSISVYLLQKQGYEVIGVTLN----HKKE----ESLKEEIDSAKKV 53

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 +  ++ +  +      +   +          P+  V     + +     +A   
Sbjct: 54  ANFFNIKHRVIDIEDIFQKEVVNNFLD---GYSKGITPSPCVICDERVKMKILFDIADEE 110

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-------TVHTPLMWLKKYE 179
               +  G   +        +    +A ++  +     +         +  PL    K E
Sbjct: 111 KAYYVATGHYCSTEYNEEFDKILLKKAKDSKKDQSYMLYRLDSDKISRLLFPLFKYTKNE 170

Query: 180 TWKLAQDIG 188
             ++ ++IG
Sbjct: 171 IREIGENIG 179


>gi|91978423|ref|YP_571082.1| tRNA-specific 2-thiouridylase MnmA [Rhodopseudomonas palustris
           BisB5]
 gi|91684879|gb|ABE41181.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhodopseudomonas palustris BisB5]
          Length = 402

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 55/204 (26%), Gaps = 19/204 (9%)

Query: 1   MNDII---------KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVEL 50
           M + +          +    ++  SGG DSS   +    +   V  ++   Y        
Sbjct: 1   MTESMLNSLDLEGRPQDTRVVVAMSGGVDSSATAALLKSQGYDVVGITLQLYDHGAATHR 60

Query: 51  ECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPG 110
           +   C  + I +     +      ++L           S+  + A        P   +  
Sbjct: 61  KGACCAGQDIHDARAVAERIGIPHYVLD---YESRFRESVIDSFADSYALGETPVPCIEC 117

Query: 111 RNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCR------HDTIRAIETAINLGMES 164
              +        A  LG + +  G   +        R                     E 
Sbjct: 118 NRSVKFRDLLATARELGASALATGHYVSSRRLDDGSRALICAADRDRDQSYFLFATTREQ 177

Query: 165 HVTVHTPLMWLKKYETWKLAQDIG 188
              +  PL  + K +T +LA+  G
Sbjct: 178 LDFLRFPLGDMTKPQTRELARQFG 201


>gi|221194434|ref|ZP_03567491.1| thiamine biosynthesis/tRNA modification protein ThiI [Atopobium
           rimae ATCC 49626]
 gi|221185338|gb|EEE17728.1| thiamine biosynthesis/tRNA modification protein ThiI [Atopobium
           rimae ATCC 49626]
          Length = 412

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 49/184 (26%), Gaps = 25/184 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L S G DS         R   V  + F                     +++   + 
Sbjct: 179 KVVSLLSSGIDSPVATWMVGRRGATVIPVHF------SGRPMTADTSEYLCQDIISTLEG 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +     +  +         SLT   ++           +  R +  +          G +
Sbjct: 233 AGIIGRLYVVPFGERQREISLTVPQSL--------RIIMYRRVMYQVSERIAQIE--GAS 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      +          + ++    +     + +  PL+   K E    AQ IG 
Sbjct: 283 ALVTGESLGQVAS---------QTLDNIAAVNEAVTIPILRPLIGSDKQEIIARAQAIGT 333

Query: 190 QDLV 193
            D+ 
Sbjct: 334 FDIS 337


>gi|188534649|ref|YP_001908446.1| thiamine biosynthesis protein ThiI [Erwinia tasmaniensis Et1/99]
 gi|238691978|sp|B2VHS0|THII_ERWT9 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|188029691|emb|CAO97570.1| Thiamine biosynthesis protein ThiI [Erwinia tasmaniensis Et1/99]
          Length = 482

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++       
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWKR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 YGSTHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKIAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K    KLA++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIIKLAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|260576792|ref|ZP_05844777.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhodobacter sp. SW2]
 gi|259021044|gb|EEW24355.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhodobacter sp. SW2]
          Length = 379

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 50/186 (26%), Gaps = 10/186 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +   +    V  ++   Y     +  +   C  + I +     +
Sbjct: 20  RVVVAMSGGVDSSVVAAMLAEEGYDVVGVTLQLYDHGAALAKKGACCAGRDIHDARRVAE 79

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL-- 126
                 ++L          +++    A        P   +     +        A  L  
Sbjct: 80  AMGFPHYVLDYEN---TFRAAVIDEFADAYLAGATPVPCIRCNERVKFKDLLATARELDA 136

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL----KKYETWK 182
                   +        P+    T  A + +  L   +   +      L     K ET  
Sbjct: 137 DCMATGHYIQRKLGLHGPELHSATDPARDQSYFLFSTTAEQLDYLRFPLGHLASKAETRA 196

Query: 183 LAQDIG 188
           LA   G
Sbjct: 197 LAARYG 202


>gi|205822155|sp|Q131Q8|MNMA_RHOPS RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 398

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 51/186 (27%), Gaps = 10/186 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +    +   V  ++   Y        +   C  + I +     +
Sbjct: 15  RVVVAMSGGVDSSATAALLKSQGYDVVGITLQLYDHGAATHRKGACCAGQDIHDARAVAE 74

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           S+  + A        P   +     +        A  LG 
Sbjct: 75  RIGIPHYVLD---YESRFRESVIDSFADSYALGETPVPCIECNRSVKFRDLLATARELGA 131

Query: 129 TNIVIGVCETDYSGYPDCR------HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           + +  G   +        R                     E    +  PL  + K +T +
Sbjct: 132 SALATGHYVSSRRLDDGSRALICAADRDRDQSYFLFATTREQLDFLRFPLGDMTKPQTRE 191

Query: 183 LAQDIG 188
           LA+  G
Sbjct: 192 LARQFG 197


>gi|167036086|ref|YP_001671317.1| thiamine biosynthesis protein ThiI [Pseudomonas putida GB-1]
 gi|166862574|gb|ABZ00982.1| thiamine biosynthesis/tRNA modification protein ThiI [Pseudomonas
           putida GB-1]
          Length = 484

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 57/181 (31%), Gaps = 25/181 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           L+L SGG DS+      + R        F+ G R              ++E+        
Sbjct: 183 LVLMSGGFDSTVAAYQMMRRGLMTHFCFFNLGGRAHELG---------VMEVAHYLWKKY 233

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G    +       +  S   + V  +I +    +        + L  AA +A RL I  +
Sbjct: 234 GSSQRV-------LFISVPFEEVVGEILNKVDNSYMGVTLKRMMLRGAAHMADRLEIDAL 286

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V G   +  S         I +    +         V  PL+   K +    A +IG  D
Sbjct: 287 VTGEAISQVSSQTLPNLSIIDSATDKL---------VLRPLLASHKQDIIDQANEIGTAD 337

Query: 192 L 192
            
Sbjct: 338 F 338


>gi|212636366|ref|YP_002312891.1| thiamine biosynthesis protein ThiI [Shewanella piezotolerans WP3]
 gi|226703950|sp|B8CQH4|THII_SHEPW RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|212557850|gb|ACJ30304.1| Thiamine biosynthesis protein [Shewanella piezotolerans WP3]
          Length = 484

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 63/196 (32%), Gaps = 27/196 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVEL 63
           +      L L SGG DS       + R  R     F+ G   +++           + ++
Sbjct: 176 MATQEDVLSLISGGFDSGVSSYQFIKRGSRTHYCFFNLGGDQHEIG----------VKQV 225

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                   GE H +          S     V  +I +             + +  AA +A
Sbjct: 226 AYHLWQKYGESHKVKFI-------SVPFDPVVQEILERVDNGQMGVVLKRMMMRAAARVA 278

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            ++GI  +V G      S       + I      +         +  PL+ + K +   +
Sbjct: 279 DKMGIQALVTGEAMGQVSSQTLTNLNVIDRCTEQL---------ILRPLIAMDKQDIINI 329

Query: 184 AQDIGGQDLVNLILEE 199
           +++IG +D    I E 
Sbjct: 330 SREIGTEDFAKSIPEY 345


>gi|157376456|ref|YP_001475056.1| thiamine biosynthesis protein ThiI [Shewanella sediminis HAW-EB3]
 gi|189030654|sp|A8FYK5|THII_SHESH RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|157318830|gb|ABV37928.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
           sediminis HAW-EB3]
          Length = 484

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 62/196 (31%), Gaps = 27/196 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVEL 63
           +      L L SGG DS       + R  R     F+ G   +++           + ++
Sbjct: 176 MATQEDVLSLISGGFDSGVSSYQFIKRGSRTHYCFFNLGGDQHEIG----------VKQV 225

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                   GE H +          S     V  +I +             + +  AA LA
Sbjct: 226 AYHLWQKYGESHKVKFI-------SVPFDPVVTEILEKIDNGQMGVILKRMMMRTAARLA 278

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            ++GI  +V G      S       + I      +         +  PL+ + K +   L
Sbjct: 279 DKMGIQALVTGEAMGQVSSQTLTNLNVIDRCTEQL---------ILRPLIAMDKQDIINL 329

Query: 184 AQDIGGQDLVNLILEE 199
           ++ IG +D    I E 
Sbjct: 330 SRKIGTEDFSKSIPEY 345


>gi|149276507|ref|ZP_01882651.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pedobacter sp. BAL39]
 gi|149233027|gb|EDM38402.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pedobacter sp. BAL39]
          Length = 353

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 49/187 (26%), Gaps = 12/187 (6%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
            SGG DSS       ++   V  L+    DY        E   C    I +      +  
Sbjct: 1   MSGGVDSSVAAVMLHEQGYEVIGLTMKTWDYATSGSSSKETGCCSLDSINDARTLAVNYG 60

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
              +IL +             +          PN  V     I        A +L    I
Sbjct: 61  FPHYILDIRDEFGDYVIDNFVDE---YLAGRTPNPCVLCNTHIKWEALLKRANKLDCEFI 117

Query: 132 VIGVCETDYSGYPDCR------HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
             G                    +          +  E+      PL    K E  ++A 
Sbjct: 118 ATGHYANVRQHDNGRHVISKGLDENKDQSYVLWGVSQENLARTKFPLGSFAKSEIRQMAL 177

Query: 186 DIGGQDL 192
           D+G ++L
Sbjct: 178 DMGQEEL 184


>gi|332525693|ref|ZP_08401842.1| tRNA-specific 2-thiouridylase MnmA [Rubrivivax benzoatilyticus JA2]
 gi|332109252|gb|EGJ10175.1| tRNA-specific 2-thiouridylase MnmA [Rubrivivax benzoatilyticus JA2]
          Length = 363

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 45/192 (23%), Gaps = 10/192 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           ++     ++  SGG DS+        +   V  L     + +     C         + +
Sbjct: 1   MQGKRRVVVGLSGGVDSAVSAWLLKQQGYEVVGLFMKNWEDDDDSEYCSSRQ-----DFL 55

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                +      L            +      +      PN  V     I        A 
Sbjct: 56  DAAAVADVIGIDLEHVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAM 115

Query: 125 RLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           RLG   I  G                              L          P+  L K E
Sbjct: 116 RLGAERIATGHYARVRERDGRFELLKGLDPAKDQSYFLHRLNQAQLARTMFPVGELPKTE 175

Query: 180 TWKLAQDIGGQD 191
             ++A +IG  +
Sbjct: 176 VRRIAAEIGLPN 187


>gi|332532676|ref|ZP_08408552.1| thiamine biosynthesis protein ThiI [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332037892|gb|EGI74341.1| thiamine biosynthesis protein ThiI [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 485

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 55/187 (29%), Gaps = 25/187 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      L L SGG DS       + +  R   L F+ G            +  K     
Sbjct: 177 LPTQEDVLSLMSGGFDSGVASYQMIRKGARTHFLFFNLGG-------AAHEIGVKQASYF 229

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             WK       +           +   + V  +I +N   +        + +   + +A 
Sbjct: 230 -LWKKYSSTHKV--------KFITVDFEPVVAEILENVENSQMGVVLKRMMMRAGSVVAE 280

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           +L I  +V G      S         I  +   +         +  PL+   K E   LA
Sbjct: 281 KLNIQALVTGESIGQVSSQTLANLSVIDRVTETL---------ILRPLIQNDKQEIINLA 331

Query: 185 QDIGGQD 191
           + IG  +
Sbjct: 332 RQIGTAE 338


>gi|327192984|gb|EGE59899.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase protein
           [Rhizobium etli CNPAF512]
          Length = 399

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 48/190 (25%), Gaps = 14/190 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS        +   V  ++   Y     V      C  + I +     +
Sbjct: 14  RVVVAMSGGVDSSVVAGLLKQQGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 73

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++    A        P   V     +        A  LG 
Sbjct: 74  TLGIPHYVLD---YEKRFRETVINPFAESYVAGETPIPCVSCNQTVKFADLLATAKELGA 130

Query: 129 TNIVIGVCETDYSGYPDCRH----------DTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             +  G                                      E    +  PL  L K 
Sbjct: 131 DALATGHYIRSRPNPSPEHPGRRALFRPADADRDQSYFLFATTQEQIDYLRFPLGGLPKA 190

Query: 179 ETWKLAQDIG 188
           ET +LA+++G
Sbjct: 191 ETRRLAEEMG 200


>gi|190893264|ref|YP_001979806.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
           [Rhizobium etli CIAT 652]
 gi|229486418|sp|B3PYW4|MNMA_RHIE6 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|190698543|gb|ACE92628.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase protein
           [Rhizobium etli CIAT 652]
          Length = 408

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 48/190 (25%), Gaps = 14/190 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS        +   V  ++   Y     V      C  + I +     +
Sbjct: 23  RVVVAMSGGVDSSVVAGLLKQQGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 82

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++    A        P   V     +        A  LG 
Sbjct: 83  TLGIPHYVLD---YEKRFRETVINPFAESYVAGETPIPCVSCNQTVKFADLLATAKELGA 139

Query: 129 TNIVIGVCETDYSGYPDCRH----------DTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             +  G                                      E    +  PL  L K 
Sbjct: 140 DALATGHYIRSRPNPSPEHPGRRALFRPADADRDQSYFLFATTQEQIDYLRFPLGGLPKA 199

Query: 179 ETWKLAQDIG 188
           ET +LA+++G
Sbjct: 200 ETRRLAEEMG 209


>gi|209550765|ref|YP_002282682.1| tRNA-specific 2-thiouridylase MnmA [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|226704775|sp|B5ZNK8|MNMA_RHILW RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|209536521|gb|ACI56456.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 399

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 48/190 (25%), Gaps = 14/190 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS        +   V  ++   Y     V      C  + I +     +
Sbjct: 14  RVVVAMSGGVDSSVVAGLLKQQGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 73

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++    A        P   V     +        A  LG 
Sbjct: 74  TLGIPHYVLD---YEKRFRETVINPFAESYVAGETPIPCVSCNQTVKFADLLATAKELGA 130

Query: 129 TNIVIGVCETDYSGYPDCRH----------DTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             +  G                                      E    +  PL  L K 
Sbjct: 131 DALATGHYIRSRPNPSPEHPGRRALYRPADADRDQSYFLFATTQEQIDYLRFPLGGLPKA 190

Query: 179 ETWKLAQDIG 188
           ET +LA+++G
Sbjct: 191 ETRRLAEEMG 200


>gi|167629936|ref|YP_001680435.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Heliobacterium modesticaldum Ice1]
 gi|205816855|sp|B0TFA7|MNMA_HELMI RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|167592676|gb|ABZ84424.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Heliobacterium modesticaldum Ice1]
          Length = 385

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 55/189 (29%), Gaps = 9/189 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              + ++  SGG DSS   +  L++   V  ++     ++  E     C     VE   +
Sbjct: 1   MKETVVVAMSGGVDSSVTAALLLEQGYDVIGVTLQIWPKDAPEGAEGGCCSLSAVEDAKR 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               LG  H +      D   + + +    +      PN  +    +I        +  L
Sbjct: 61  VASKLGVPHYV--LNFRDYFETEVIEYFGREYLAGQTPNPCIRCNRVIKFEGLLQKSLAL 118

Query: 127 GITNIVIGVCETDYSGYPDCRHD-------TIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           G   +  G            R+                 N+  E       PL    K E
Sbjct: 119 GAAKVATGHYARIEQDSATGRYRLGRGIDANKDQSYALFNMTQEQLSRTLFPLGGFTKPE 178

Query: 180 TWKLAQDIG 188
             + A  +G
Sbjct: 179 IREKAAQLG 187


>gi|225570688|ref|ZP_03779711.1| hypothetical protein CLOHYLEM_06788 [Clostridium hylemonae DSM
           15053]
 gi|225160515|gb|EEG73134.1| hypothetical protein CLOHYLEM_06788 [Clostridium hylemonae DSM
           15053]
          Length = 361

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 50/191 (26%), Gaps = 12/191 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ---RNKVELECRLCVRKKIVEL 63
           +    ++  SGG DSS       ++   V  ++    Q   R   E     C    + + 
Sbjct: 2   EKKKVVVGMSGGVDSSVAAYLLKEQGYDVIGVTMQIWQEEERAVQEENGGCCGLSAVDDA 61

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      +++            +      +      PN  +     +        +
Sbjct: 62  RRVAAQLGIPYYVMN---FRQEFKEHVIDYFVDEYTHGRTPNPCIACNRYVKWESLLKRS 118

Query: 124 YRLGITNIVIGVCET------DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
             +G   I  G          +         DT        NL  E       P+   +K
Sbjct: 119 MDIGADYIATGHYARIEQLPNERYALKVSATDTKDQTYALYNLTQEQLRRTLMPVGMYEK 178

Query: 178 YETWKLAQDIG 188
            E  ++A  +G
Sbjct: 179 EEIRRIAGSLG 189


>gi|242240307|ref|YP_002988488.1| thiamine biosynthesis protein ThiI [Dickeya dadantii Ech703]
 gi|242132364|gb|ACS86666.1| thiamine biosynthesis/tRNA modification protein ThiI [Dickeya
           dadantii Ech703]
          Length = 482

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVKQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +              + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVA-------VDFEPVVGEILEKVDDGQMGVVLKRMMVRAASRIAERYGVEA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K    KLA+++G +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIIKLARELGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|170758983|ref|YP_001788227.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum A3 str. Loch Maree]
 gi|205810606|sp|B1KZJ2|MNMA2_CLOBM RecName: Full=tRNA-specific 2-thiouridylase mnmA 2
 gi|169405972|gb|ACA54383.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum A3 str. Loch Maree]
          Length = 353

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 52/188 (27%), Gaps = 13/188 (6%)

Query: 7   KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
            +   + L  SGG DSS       +R   V  +  D   R++ E  C     +    +  
Sbjct: 1   MSKGIVALAMSGGVDSSVSAYILKERGYEVIGIYMDLW-RDEREEYCNKSAAEDARRVAE 59

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           K        HI+    +G    +++      +      PN  V     I        A  
Sbjct: 60  KLD---IPFHIIN---IGKEFKANVIDYFIDEYLSGRTPNPCVACNKTIKFEAFFNAAKE 113

Query: 126 LGITNIVIGVCETDYSGYPDC-----RHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            G   +  G                   D         NL          P    +K   
Sbjct: 114 FGADFMATGHYCKIEERNRRKVIVKAEDDKKDQTYMMYNLKQYQLERTIMPCGEYRKEHI 173

Query: 181 WKLAQDIG 188
            ++A++IG
Sbjct: 174 REIAENIG 181


>gi|167765590|ref|ZP_02437654.1| hypothetical protein CLOSS21_00084 [Clostridium sp. SS2/1]
 gi|167712775|gb|EDS23354.1| hypothetical protein CLOSS21_00084 [Clostridium sp. SS2/1]
          Length = 363

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 46/190 (24%), Gaps = 10/190 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL--M 64
                ++  SGG DSS        +   V  ++    Q     ++        +  +   
Sbjct: 1   MKEKVVVGMSGGVDSSVAAYLLKKQGYDVIGVTMQIWQEEDEFVQEENGGCCGLSAVDDA 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            +    +G  H + +    D     +       +            R  +          
Sbjct: 61  RRVAQMIGIPHYV-MNFRKDFKDKVIDYFCEEYLNARTPNPCIACNR-YVKWESLLKRCL 118

Query: 125 RLGITNIVIGVCETDY------SGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            +G   I  G                  +           NL          P+    K 
Sbjct: 119 DIGADYIATGHYSQITKLDNGRYALKCSKTQKKDQTYALYNLTQNQLSKTLMPIGAYTKD 178

Query: 179 ETWKLAQDIG 188
           E  ++A++IG
Sbjct: 179 EVRQIAEEIG 188


>gi|320536235|ref|ZP_08036280.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Treponema phagedenis F0421]
 gi|320146893|gb|EFW38464.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Treponema phagedenis F0421]
          Length = 359

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 51/183 (27%), Gaps = 7/183 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DS+      L++   V  ++    Q      E      + I +       
Sbjct: 2   KILVGLSGGVDSAVAAKLLLEQGHEVSGVTM---QMISPVGEIIKSQEQDIADARAIANT 58

Query: 70  SLGEDHILPLAILGD---ISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL-AYR 125
              +   L L        +++ + T    +      + N  +  R ++         A  
Sbjct: 59  LGIDFFTLDLRSAFREEIMNYFAETYKQGLTPNPCFICNKKMKFRRLLDAALERGFDAIA 118

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G    ++   +T                     L       +  PL    K E  K+A+
Sbjct: 119 TGHYAQIMRDLKTGRYLLLQGSDSKKDQSYFLALLNQFQLAHIMFPLGNYTKPEVRKIAE 178

Query: 186 DIG 188
             G
Sbjct: 179 KAG 181


>gi|222055075|ref|YP_002537437.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Geobacter sp. FRC-32]
 gi|221564364|gb|ACM20336.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Geobacter sp. FRC-32]
          Length = 370

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 43/143 (30%), Gaps = 9/143 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVR 57
           MN   K     ++  SGG DSS   +   ++   V  +S    DYG+    E E      
Sbjct: 1   MNK-EKSKKRVVIAMSGGVDSSVSAALLQEQGFEVIGISMQVWDYGKFAAAEGEKFDTCC 59

Query: 58  --KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
               I +     +      +++      D     + K+   +      PN  V     I 
Sbjct: 60  SLDDIHDARRVAEQLGIPFYVVN---FEDEFEDLVIKDFVDEYLKGRTPNPCVRCNQWIK 116

Query: 116 LVFAATLAYRLGITNIVIGVCET 138
                  A  LG   I  G    
Sbjct: 117 FELLLKKARGLGADFIATGHYAR 139


>gi|317498544|ref|ZP_07956838.1| tRNA methyl transferase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316894237|gb|EFV16425.1| tRNA methyl transferase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 363

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 46/190 (24%), Gaps = 10/190 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL--M 64
                ++  SGG DSS        +   V  ++    Q     ++        +  +   
Sbjct: 1   MKEKVVVGMSGGVDSSVAAYLLKKQGYDVIGVTMQIWQEEDEFVQEENGGCCGLSAVDDA 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            +    +G  H + +    D     +       +            R  +          
Sbjct: 61  RRVAQMIGIPHYV-MNFRKDFKDKVIDYFCEEYLNARTPNPCIACNR-YVKWESLLKRCL 118

Query: 125 RLGITNIVIGVCETDY------SGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            +G   I  G                  +           NL          P+    K 
Sbjct: 119 DIGADYIATGHYSQITKLDNGRYALKCSKTQKKDQTYALYNLTQNQLSKTLMPIGAYTKD 178

Query: 179 ETWKLAQDIG 188
           E  ++A++IG
Sbjct: 179 EVRQIAEEIG 188


>gi|310766825|gb|ADP11775.1| thiamine biosynthesis protein ThiI [Erwinia sp. Ejp617]
          Length = 482

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++       
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWKR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 YGSTHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASQIAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K    KLA++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIIKLAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|260889735|ref|ZP_05900998.1| tRNA methyl transferase [Leptotrichia hofstadii F0254]
 gi|260860341|gb|EEX74841.1| tRNA methyl transferase [Leptotrichia hofstadii F0254]
          Length = 229

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 58/193 (30%), Gaps = 6/193 (3%)

Query: 1   MN--DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVR 57
           MN  +I+++    +L  SGG DSS       ++   V  +   ++ ++++  +       
Sbjct: 1   MNRENIVERRKKVVLGMSGGVDSSVAAILLKEQGYDVIGVFMKNWEEKDENGVCMAEEDY 60

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           K ++ +  + +      + +        ++             + + N  +  R  +   
Sbjct: 61  KDVIAVAEQLEIPYYSVNFVKEYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFRAFLDYA 120

Query: 118 FAAT---LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
                  +A       I         S       D          L  E    V  PL  
Sbjct: 121 MKLGADYVATGHYARIIHEEKDGKIKSTMLRGIDDNKDQTYFLCQLSQEQLEKVLFPLGE 180

Query: 175 LKKYETWKLAQDI 187
             K +  ++A+  
Sbjct: 181 YTKPQIREIAEKY 193


>gi|209884347|ref|YP_002288204.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Oligotropha carboxidovorans OM5]
 gi|229486419|sp|B6JCC3|MNMA_OLICO RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|209872543|gb|ACI92339.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Oligotropha carboxidovorans OM5]
          Length = 393

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 48/184 (26%), Gaps = 10/184 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSST  +        V  ++   Y        +   C  + I +     +
Sbjct: 15  RVVVAMSGGVDSSTTAALLKAEGYDVIGITLQLYDHGEATHRKGACCAGQDIHDARDVAE 74

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           S+    A        P   +     +      T A  LG 
Sbjct: 75  RIGIPHYVLD---YESRFRESVIDRFAESYALGETPVPCIECNRSVKFRDLLTTAQELGA 131

Query: 129 TNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
             +  G            R                     +    +  PL  + K +T +
Sbjct: 132 QALATGHYVASRRQPDGSRAMVCAADADRDQSYFLFATTQDQLNHLRFPLGDMTKAQTRE 191

Query: 183 LAQD 186
           LA+ 
Sbjct: 192 LARR 195


>gi|292487453|ref|YP_003530325.1| thiamine biosynthesis protein ThiI [Erwinia amylovora CFBP1430]
 gi|292898695|ref|YP_003538064.1| thiamine biosynthesis protein [Erwinia amylovora ATCC 49946]
 gi|291198543|emb|CBJ45651.1| thiamine biosynthesis protein [Erwinia amylovora ATCC 49946]
 gi|291552872|emb|CBA19917.1| Thiamine biosynthesis protein thiI [Erwinia amylovora CFBP1430]
          Length = 482

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++       
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWKR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 YGSTHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASQIAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K    KLA++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIIKLAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|312065441|ref|XP_003135792.1| hypothetical protein LOAG_00204 [Loa loa]
 gi|307769046|gb|EFO28280.1| hypothetical protein LOAG_00204 [Loa loa]
          Length = 996

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 57/187 (30%), Gaps = 7/187 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              L++ SGG DS+ C +        DRV  +  D G     E +  +    K+   + +
Sbjct: 538 KKVLVMVSGGVDSTVCAALLHKALGSDRVIAVHIDNGFMRTSESDRVVESLNKLNLKVRR 597

Query: 67  WKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
           +          I     L      ++   V  KI  +          + + L     LA 
Sbjct: 598 YNAFYAFMNGRIPMENELSTPLMRTVQPEVKRKIIGDTFMRVKDKIMDELKLDKDVFLAQ 657

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                +++        S     +     +   A+   +     V  PL    K E  +L 
Sbjct: 658 GTLRPDLIESASHLASSHADVIKTHHNDS---ALVRELRDLGKVLEPLKDFHKDEVRELG 714

Query: 185 QDIGGQD 191
             +G  +
Sbjct: 715 ISLGLPE 721


>gi|298490709|ref|YP_003720886.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           ['Nostoc azollae' 0708]
 gi|298232627|gb|ADI63763.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           ['Nostoc azollae' 0708]
          Length = 351

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 55/187 (29%), Gaps = 15/187 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS   +   ++   V  L+        +      C  + +++     +
Sbjct: 2   KKVVVGLSGGVDSSVAAAMLHNQGYDVIGLTL------WLMKGKGQCCSEGMIDAASVCE 55

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                  ++ +  +   +      +           +          +V  A    +LG 
Sbjct: 56  QLGIPHEVVDIRDVFQANIVDYLLSGYSMGITPLPCSQCNKTVKFGPMVEYAR--EKLGS 113

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH-------TPLMWLKKYETW 181
             I  G            R+  +RA+    +     +            PL  L K +T 
Sbjct: 114 NAIATGHYAQVRYDETTGRYKLLRAVYRNKDQSYFLYDLSQDLLSASVFPLGELNKTDTR 173

Query: 182 KLAQDIG 188
           ++A + G
Sbjct: 174 RIAAEYG 180


>gi|222149632|ref|YP_002550589.1| tRNA-specific 2-thiouridylase MnmA [Agrobacterium vitis S4]
 gi|221736614|gb|ACM37577.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Agrobacterium vitis S4]
          Length = 402

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 47/190 (24%), Gaps = 14/190 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS            V  ++   Y     V      C  + I +     +
Sbjct: 18  RVVVAMSGGVDSSVVAGILKREGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 77

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++             P   V     +        A  LG 
Sbjct: 78  TLGIPHYVLD---YEQRFRDTVINPFMDSYIAGETPIPCVACNQTVKFADLLATARELGA 134

Query: 129 TNIVIGVCETDYSGYPDCRHDT----------IRAIETAINLGMESHVTVHTPLMWLKKY 178
             +  G      +                               E    +  PL  L K 
Sbjct: 135 DALATGHYIRSRATPLPNDPGHRALFRPIDSERDQSYFLFATTQEQIDYLRFPLGGLSKA 194

Query: 179 ETWKLAQDIG 188
           ET KLA+D+G
Sbjct: 195 ETRKLAEDMG 204


>gi|18977888|ref|NP_579245.1| GMP synthase subunit B [Pyrococcus furiosus DSM 3638]
 gi|23821600|sp|Q8U0R8|GUAAB_PYRFU RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
           AltName: Full=GMP synthetase
 gi|18893648|gb|AAL81640.1| GMP synthase [Pyrococcus furiosus DSM 3638]
          Length = 313

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 62/185 (33%), Gaps = 25/185 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A++  SGG DSST    A     DR+  +  + G   K E E    V K   +      
Sbjct: 27  KAIIALSGGVDSSTAAVLAHRAIGDRLHAVFVNTGFLRKGEPEF---VIKTFRDEFGMNL 83

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             +        A L  ++     + +                   +F+     +A  +G 
Sbjct: 84  HYVDAQDRF-FAALKGVTDPEEKRKIIG----------------RVFIEVFEEVAKDIGA 126

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++        +         I++      L  + ++ +  PL  L K E  +LA+++G
Sbjct: 127 EYLIQ----GTIAPDWIESQGKIKSHHNVGGLPEKLNLKIIEPLRDLYKDEVRQLAKELG 182

Query: 189 GQDLV 193
             + +
Sbjct: 183 LPEKI 187


>gi|86604778|ref|YP_473541.1| tRNA-specific 2-thiouridylase MnmA [Synechococcus sp. JA-3-3Ab]
 gi|123508144|sp|Q2JY34|MNMA_SYNJA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|86553320|gb|ABC98278.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Synechococcus sp. JA-3-3Ab]
          Length = 370

 Score = 59.2 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 54/188 (28%), Gaps = 15/188 (7%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            P  +   SGG DSST  +   ++   VE ++        +      C    +V+     
Sbjct: 19  RPRIVAALSGGVDSSTVAAILHEQGYAVEGVTL------WLMRGKGQCCTDGLVDAAAIC 72

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +      HI+    L   +                  +          L+  A     LG
Sbjct: 73  EQLGIPHHIVDSRELFQANIVDYLVAGYADGITPLPCSQCNKLVKFGPLLTYAR--ETLG 130

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW-------LKKYET 180
           I+ I  G            R+  +RA++   +     +      L           K +T
Sbjct: 131 ISQIATGHYARVRFNSELGRYQLLRAVDRQKDQSYFLYDLSQEHLAHSLFPLGNYTKAQT 190

Query: 181 WKLAQDIG 188
            ++A   G
Sbjct: 191 RQIAARYG 198


>gi|150397798|ref|YP_001328265.1| tRNA-specific 2-thiouridylase MnmA [Sinorhizobium medicae WSM419]
 gi|205828972|sp|A6UCQ0|MNMA_SINMW RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|150029313|gb|ABR61430.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sinorhizobium medicae WSM419]
          Length = 398

 Score = 58.8 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 51/191 (26%), Gaps = 16/191 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS            V  ++   Y     V      C  + I +     +
Sbjct: 14  RVVVAMSGGVDSSVVAGLLKREGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 73

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++    A        P   V     +        A  LG 
Sbjct: 74  TIGIPHYVLD---YEARFRETVINPFAESYIAGETPIPCVACNQTVKFADLLATAKELGA 130

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM-----------WLKK 177
             +  G         P  R+   RA+    +   +    +                 L K
Sbjct: 131 DALATGHYIRSRPS-PMPRYPGQRALYRPADADRDQSYFLFATTQEQIDYLRFPLGGLPK 189

Query: 178 YETWKLAQDIG 188
            ET  LA+++G
Sbjct: 190 SETRALAEEMG 200


>gi|240102208|ref|YP_002958516.1| P-loop ATPase, MJ1599 type [Thermococcus gammatolerans EJ3]
 gi|239909761|gb|ACS32652.1| P-loop ATPase, MJ1599 type [Thermococcus gammatolerans EJ3]
          Length = 276

 Score = 58.8 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 31/69 (44%), Gaps = 2/69 (2%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKI 60
           +++K    A++ +SGG+DS   L  A + +    +E +  D+G   +  +E    + + +
Sbjct: 47  ELMKNVDKAIVAYSGGKDSVVALYLAKEVYKVPELEAVMIDHGLMAEEAIENARRIAEHL 106

Query: 61  VELMPKWKD 69
                  + 
Sbjct: 107 GVPFRVLRY 115


>gi|237720472|ref|ZP_04550953.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides sp. 2_2_4]
 gi|293368878|ref|ZP_06615481.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides ovatus SD CMC 3f]
 gi|229450223|gb|EEO56014.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides sp. 2_2_4]
 gi|292636027|gb|EFF54516.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides ovatus SD CMC 3f]
          Length = 385

 Score = 58.8 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 53/187 (28%), Gaps = 10/187 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIV 61
           ++++    LL  SGG DSS      L+    V  ++F + + N      E    + +++ 
Sbjct: 1   MMEENKRVLLGMSGGTDSSVAAMRLLEAGYEVIGVTFRFYELNGSTEYLEDARNLAERLG 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                +         +    + +      T    +   +           + + + + AT
Sbjct: 61  IRHITYDAREIFSKQIIEYFVQEYLAG-RTPVPCILCNNYLKWPLLAKIADEMGVFYIAT 119

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
             Y   I                D         +  +         +  P+  + K E  
Sbjct: 120 GHYAQNIQLNNTFYITYAADSDKDQTFFLWGLKQDILC-------RMLLPMGDITKVEAR 172

Query: 182 KLAQDIG 188
             A + G
Sbjct: 173 VWAAEHG 179


>gi|164688541|ref|ZP_02212569.1| hypothetical protein CLOBAR_02186 [Clostridium bartlettii DSM
           16795]
 gi|164602954|gb|EDQ96419.1| hypothetical protein CLOBAR_02186 [Clostridium bartlettii DSM
           16795]
          Length = 362

 Score = 58.8 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 22/193 (11%), Positives = 62/193 (32%), Gaps = 14/193 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK----VELECRLCVRKKIVE 62
                ++  SGG DSS       ++   V  ++    Q ++    +E +   C  + + +
Sbjct: 1   MKKKVMIGMSGGVDSSVAAYLLKEQGYDVIGVTMKLWQDDEEYELIENDGGCCSLEAVED 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                +      ++L      ++    +      +  +   PN  +     I        
Sbjct: 61  ARSVAQKLDIPFYVLN---FKEVFKEKVIDYFIDEYINGRTPNPCIACNKYIKFEDLYRR 117

Query: 123 AYRLGITNI----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM---WL 175
           A ++G   +       + + + +G            +    L   +   +   L+     
Sbjct: 118 ARQIGCDYVATGHYARIEKDEETGRYLLTKSVTDKKDQTYALYNMTQDQLEHTLLPIGDF 177

Query: 176 KKYETWKLAQDIG 188
           +K +  ++A+++G
Sbjct: 178 EKEKVREMAKELG 190


>gi|160883986|ref|ZP_02064989.1| hypothetical protein BACOVA_01960 [Bacteroides ovatus ATCC 8483]
 gi|156110716|gb|EDO12461.1| hypothetical protein BACOVA_01960 [Bacteroides ovatus ATCC 8483]
          Length = 378

 Score = 58.8 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 53/190 (27%), Gaps = 10/190 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIV 61
           ++++    LL  SGG DSS      L+    V  ++F + + N      E    + +++ 
Sbjct: 1   MMEENKRVLLGMSGGTDSSVAAMRLLEAGYEVIGVTFRFYELNGSTEYLEDARNLAERLG 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                +         +    + +      T        +           + + + + AT
Sbjct: 61  IRHITYDAREIFSKQIIEYFVQEYLAG-RTPVPCTLCNNYLKWPLLAKIADEMGVFYIAT 119

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
             Y   I                D         +  +         +  P+  + K E  
Sbjct: 120 GHYAQNIQLNNTFYITYAADSDKDQTFFLWGLKQDILC-------RMLLPMGDITKVEAR 172

Query: 182 KLAQDIGGQD 191
             A + G Q 
Sbjct: 173 VWAAEHGFQK 182


>gi|24638313|sp|Q8U9M5|MNMA_AGRT5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 398

 Score = 58.8 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 50/190 (26%), Gaps = 14/190 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS            V  ++   Y     V      C  + I +     +
Sbjct: 14  RIVVAMSGGVDSSVVAGILKREGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 73

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++    A        P   V     +        A  LG 
Sbjct: 74  TLGIPHYVLD---YEARFRETVINPFAEAYAMGETPIPCVACNQTVKFADLLATAQELGA 130

Query: 129 TNI----VIGVCETDYSGYPDCRHDT------IRAIETAINLGMESHVTVHTPLMWLKKY 178
             +     I       SG P  R                     E    +  PL  L K 
Sbjct: 131 DALATGHYIRSRPNPVSGQPGRRALYRPIDSDRDQSWFLFATTQEQIDYLRFPLGGLSKA 190

Query: 179 ETWKLAQDIG 188
           ET  LA+++G
Sbjct: 191 ETRALAEEMG 200


>gi|312171556|emb|CBX79814.1| Thiamine biosynthesis protein thiI [Erwinia amylovora ATCC
           BAA-2158]
          Length = 482

 Score = 58.8 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++       
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWKR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 YGSTHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASQIAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K    KLA++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIIKLAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|254171778|ref|ZP_04878454.1| GMP synthase, C-terminal domain [Thermococcus sp. AM4]
 gi|214033674|gb|EEB74500.1| GMP synthase, C-terminal domain [Thermococcus sp. AM4]
          Length = 307

 Score = 58.8 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 60/185 (32%), Gaps = 25/185 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A++  SGG DSST    A     DR+  +  + G   K E E  +   +          
Sbjct: 21  KAIIALSGGVDSSTAAILAHKAIGDRLHAVFVNTGFMRKGEPEFVVKTFR---------D 71

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +     H +  +     +   +T     +                +F+     +A  +  
Sbjct: 72  EFGLNLHYVDASERFFKALKGVTDPEEKR-----------KIIGRVFIEVFEEIAKEINA 120

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++        +         I++      L    ++ +  PL  L K E  +LA+++G
Sbjct: 121 DFLIQ----GTIAPDWIESRGKIKSHHNVGGLPERLNLKLIEPLRDLYKDEVRELAKELG 176

Query: 189 GQDLV 193
             + +
Sbjct: 177 LPEKI 181


>gi|205821605|sp|Q07SU0|MNMA_RHOP5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 400

 Score = 58.8 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 52/186 (27%), Gaps = 10/186 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSST  +        V  ++   Y     +  +   C  + I +     +
Sbjct: 15  RVVVAMSGGVDSSTTAALLKAEGYDVVGITLQLYDHGEAIHRKGACCAGQDIHDARTVAE 74

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           S+  + A        P   +     I      + A  LG 
Sbjct: 75  RIGIPHYVLD---YESRFRESVIDSFATSYATGETPVPCIECNRSIKFRDLLSTARELGA 131

Query: 129 TNIVIGVCETDYSGYPDCR------HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
             +  G   +        R                     E    +  PL  + K +T +
Sbjct: 132 AVLATGHYVSSRRLPDGSRALVCAADADRDQSYFLFATTREQLDFLRFPLGDMTKPQTRE 191

Query: 183 LAQDIG 188
           LA+  G
Sbjct: 192 LARSFG 197


>gi|72080763|ref|YP_287821.1| tRNA-specific 2-thiouridylase MnmA [Mycoplasma hyopneumoniae 7448]
 gi|123644877|sp|Q4A7U1|MNMA_MYCH7 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|71913887|gb|AAZ53798.1| tRNA-(5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Mycoplasma hyopneumoniae 7448]
          Length = 372

 Score = 58.8 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 48/187 (25%), Gaps = 8/187 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI-------VE 62
             ++  SGG DS+            V  +       +           K           
Sbjct: 3   KIVVGLSGGVDSAVSAYLLKKAGHNVIAVFMRNWDSSLNNDFLGKKNEKNFTICPQEQDW 62

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           L  K         I  +  + +      +  +             +  +NI F  F    
Sbjct: 63  LDAKVVAKQLNIPIFRIDFIKEYWDEVFSDLILKYQSGLTPNPDILCNKNIKFKHFLDYA 122

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI-NLGMESHVTVHTPLMWLKKYETW 181
                   I +G      +G      D+++     +  L          PL  L K E  
Sbjct: 123 QKVHNADFIAMGHYAKTDNGNLYAGADSLKDQSYFLGQLSKSQLQKTIFPLGNLLKSEVR 182

Query: 182 KLAQDIG 188
           K+A ++G
Sbjct: 183 KIANELG 189


>gi|269115178|ref|YP_003302941.1| thiamine biosynthesis protein thiI [Mycoplasma hominis]
 gi|268322803|emb|CAX37538.1| Thiamine biosynthesis protein thiI [Mycoplasma hominis ATCC 23114]
          Length = 382

 Score = 58.8 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 64/193 (33%), Gaps = 25/193 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   + L SGG DS    +    R  ++  L+F          +       KI E++   
Sbjct: 168 SGKCIHLISGGIDSPVAANLLQKRGLKIVFLNF------ITPPQTDEKTIAKIDEIVNIL 221

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           K   G       A+L  I++S + + + +    N      +  R+   +         + 
Sbjct: 222 KKYQGN------AMLYQINYSKVMEYIGLI--SNQKYKITLMRRSFYRIANLIAKKENIK 273

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                        S   +      + +E+   +     + +  PL+   K ET  +A+ I
Sbjct: 274 AI-----------SNGENLAQVASQTLESIYTISEVCDLPIFRPLISFDKNETIAIAKKI 322

Query: 188 GGQDLVNLILEES 200
              D+  +   E+
Sbjct: 323 NTLDVSIVRACET 335


>gi|71904774|gb|AAZ52667.1| thiamine biosynthesis protein [Mycoplasma hominis ATCC 23114]
          Length = 353

 Score = 58.8 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 64/193 (33%), Gaps = 25/193 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   + L SGG DS    +    R  ++  L+F          +       KI E++   
Sbjct: 168 SGKCIHLISGGIDSPVAANLLQKRGLKIVFLNF------ITPPQTDEKTIAKIDEIVNIL 221

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           K   G       A+L  I++S + + + +    N      +  R+   +         + 
Sbjct: 222 KKYQGN------AMLYQINYSKVMEYIGLI--SNQKYKITLMRRSFYRIANLIAKKENIK 273

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                        S   +      + +E+   +     + +  PL+   K ET  +A+ I
Sbjct: 274 AI-----------SNGENLAQVASQTLESIYTISEVCDLPIFRPLISFDKNETIAIAKKI 322

Query: 188 GGQDLVNLILEES 200
              D+  +   E+
Sbjct: 323 NTLDVSIVRACET 335


>gi|157369324|ref|YP_001477313.1| thiamine biosynthesis protein ThiI [Serratia proteamaculans 568]
 gi|189030644|sp|A8GAP5|THII_SERP5 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|157321088|gb|ABV40185.1| thiamine biosynthesis/tRNA modification protein ThiI [Serratia
           proteamaculans 568]
          Length = 482

 Score = 58.8 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
               H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FASSHKVRFIAI-------DFEPVVGEILEKVEDGQMGVVLKRMMVRAASQIAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K    K+A++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIIKVAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|21227622|ref|NP_633544.1| hypothetical protein MM_1520 [Methanosarcina mazei Go1]
 gi|20906010|gb|AAM31216.1| conserved protein [Methanosarcina mazei Go1]
          Length = 275

 Score = 58.8 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 61/187 (32%), Gaps = 32/187 (17%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
            + IK   SA++ FSGG DS+T  + A +   DR   ++ D     + +LE       +I
Sbjct: 10  REAIKARESAVIAFSGGVDSTTLAALAFEELGDRALAVTIDSPLFPRHQLETASQAACEI 69

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                       +  ILP ++      ++ T N                      L    
Sbjct: 70  G----------IQHKILPFSLNSVPYFTANTIN-------------RCYFCKKALLETLL 106

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
             A + G   ++ G   ++  G     +  I+             +        + K E 
Sbjct: 107 EFAEKTGYNAVLEGTNASEIKGENRPGYRAIQEAGEK--------IYSPFVEFNVTKEEI 158

Query: 181 WKLAQDI 187
            ++A ++
Sbjct: 159 REIAANL 165


>gi|218460955|ref|ZP_03501046.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhizobium etli Kim 5]
          Length = 353

 Score = 58.8 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 48/190 (25%), Gaps = 14/190 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS        +   V  ++   Y     V      C  + I +     +
Sbjct: 23  RVVVAMSGGVDSSVVAGLLKQQGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 82

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++    A        P   V     +        A  LG 
Sbjct: 83  TLGIPHYVLD---YEKRFRETVINPFAESYVAGETPIPCVSCNQTVKFADLLATAKELGA 139

Query: 129 TNIVIGVCETDYSGYPDCRH----------DTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             +  G                                      +    +  PL  L K 
Sbjct: 140 DALATGHYIRSRPNPSPEHPGRRALFRPADADRDQSYFLFATTQQQIDYLRFPLGGLPKA 199

Query: 179 ETWKLAQDIG 188
           ET +LA+++G
Sbjct: 200 ETRRLAEEMG 209


>gi|299147036|ref|ZP_07040103.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides sp. 3_1_23]
 gi|298514921|gb|EFI38803.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides sp. 3_1_23]
          Length = 384

 Score = 58.8 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 52/186 (27%), Gaps = 10/186 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIVE 62
           +++    LL  SGG DSS      L+    V  ++F + + N      E    + +++  
Sbjct: 1   MEENKRVLLGMSGGTDSSVAAMRLLEAGYEVIGVTFRFYELNGSTEYLEDARNLAERLGI 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
               +      +  + +        +  T        +           + + + + AT 
Sbjct: 61  RHITYDAREIFNKQI-IDYFVQEYLAGRTPVPCTLCNNYLKWPLLAKIADEMGVFYIATG 119

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
            Y   I                D         +  +         +  P+  + K E   
Sbjct: 120 HYAQNIQLNNTFYITYAADSDKDQTFFLWGLKQDILC-------RMLLPMGNITKVEARA 172

Query: 183 LAQDIG 188
            A + G
Sbjct: 173 WAAEHG 178


>gi|295102218|emb|CBK99763.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Faecalibacterium prausnitzii L2-6]
          Length = 370

 Score = 58.8 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 50/197 (25%), Gaps = 14/197 (7%)

Query: 1   MNDI--IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR- 57
           M +     + P AL+  SGG DSS               ++    +   V  E       
Sbjct: 1   MTETQNTSRRPGALIAMSGGVDSSVAAWLMQRDGFDCTGVTMRLTRNEAVNTEGLHTCCS 60

Query: 58  -KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
            + I +             +L            +        +    PN  +     +  
Sbjct: 61  ERDIEDAAEVAYAMDIPYEVLD---FTADFQERIIDKFIRVYEAGGTPNPCIDCNRYMKF 117

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVH 169
                 A   G+ ++V G            R        +         NL  E    V 
Sbjct: 118 DHLLRWAEAHGLDHVVTGHYARVEQDEATGRWLLKKGLDENKDQSYVLYNLTQEQLAHVR 177

Query: 170 TPLMWLKKYETWKLAQD 186
            PL  L K E   +A+ 
Sbjct: 178 LPLGGLHKSEVRAIAEQ 194


>gi|296101544|ref|YP_003611690.1| hypothetical protein ECL_01180 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295056003|gb|ADF60741.1| hypothetical protein ECL_01180 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 482

 Score = 58.8 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 57/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISHDKEHIIDLAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|288936858|ref|YP_003440917.1| thiamine biosynthesis/tRNA modification protein ThiI [Klebsiella
           variicola At-22]
 gi|288891567|gb|ADC59885.1| thiamine biosynthesis/tRNA modification protein ThiI [Klebsiella
           variicola At-22]
          Length = 482

 Score = 58.8 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 57/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISHDKEHIIDLAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|262042446|ref|ZP_06015606.1| thiamine biosynthesis protein ThiI [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259040221|gb|EEW41332.1| thiamine biosynthesis protein ThiI [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 482

 Score = 58.8 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 57/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISHDKEHIIDLAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|206579645|ref|YP_002240109.1| thiamine biosynthesis/tRNA modification protein ThiI [Klebsiella
           pneumoniae 342]
 gi|290510086|ref|ZP_06549456.1| thiamine biosynthesis protein thiI [Klebsiella sp. 1_1_55]
 gi|226726951|sp|B5Y0W8|THII_KLEP3 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|206568703|gb|ACI10479.1| thiamine biosynthesis/tRNA modification protein ThiI [Klebsiella
           pneumoniae 342]
 gi|289776802|gb|EFD84800.1| thiamine biosynthesis protein thiI [Klebsiella sp. 1_1_55]
          Length = 482

 Score = 58.8 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 57/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISHDKEHIIDLAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|152968948|ref|YP_001334057.1| thiamine biosynthesis protein ThiI [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238893360|ref|YP_002918094.1| thiamine biosynthesis protein ThiI [Klebsiella pneumoniae
           NTUH-K2044]
 gi|330006918|ref|ZP_08305790.1| thiamine biosynthesis/tRNA modification protein ThiI [Klebsiella
           sp. MS 92-3]
 gi|189030634|sp|A6T5F6|THII_KLEP7 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|150953797|gb|ABR75827.1| thiamine biosynthesis protein ThiI [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238545676|dbj|BAH62027.1| thiamine biosynthesis protein [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|328535672|gb|EGF62121.1| thiamine biosynthesis/tRNA modification protein ThiI [Klebsiella
           sp. MS 92-3]
          Length = 482

 Score = 58.8 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 57/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISHDKEHIIDLAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|148244833|ref|YP_001219527.1| tRNA-specific 2-thiouridylase MnmA [Candidatus Vesicomyosocius
           okutanii HA]
 gi|166235089|sp|A5CW80|MNMA_VESOH RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|146326660|dbj|BAF61803.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Candidatus Vesicomyosocius okutanii HA]
          Length = 362

 Score = 58.8 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 40/136 (29%), Gaps = 5/136 (3%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
             + K    ++  SGG DSS      L +  +VE L     + +     C    ++ + +
Sbjct: 2   KNLNKNTKIIVGLSGGVDSSVTALLLLKQGYQVEALFMKNWEEDDKGRYCS--AKQDLSD 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     + H +          + +  +   + +    PN  +     I        
Sbjct: 60  AQNITNKLSIKLHTIN---FSVDYWNDVFTHFLKEYKKGRTPNPDILCNQKIKFGAFLKH 116

Query: 123 AYRLGITNIVIGVCET 138
           A  LG   I  G    
Sbjct: 117 AISLGADKIATGHYAR 132


>gi|260889979|ref|ZP_05901242.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Leptotrichia hofstadii F0254]
 gi|260860585|gb|EEX75085.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Leptotrichia hofstadii F0254]
          Length = 371

 Score = 58.8 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 57/191 (29%), Gaps = 7/191 (3%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE-LECRLCVRKK 59
           MN  + +    ++  SGG DSS        +   V  ++  +      E      C    
Sbjct: 7   MNKKLDE-KKVVVGMSGGIDSSVAALLLKQQGYEVIGVTLKHLPDELSENPGKTCCSLDD 65

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           I +            ++L +    +     + +           P+  V     + +   
Sbjct: 66  INDARYTCYTLGIPHYVLNVV---EEFKKDVMEYFIKMYNAGKTPSPCVICDEKVKIKKL 122

Query: 120 ATLAYRLGITNI--VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
              A ++GI  I        ++ +     +++          L  +       PL   +K
Sbjct: 123 LEFADKMGIKYISTGHYSKVSENNMLLWDKNNRKDQTYMLYRLDKDVVERFLFPLAEYEK 182

Query: 178 YETWKLAQDIG 188
            E  ++A+  G
Sbjct: 183 SEVREIARQNG 193


>gi|170727808|ref|YP_001761834.1| thiamine biosynthesis protein ThiI [Shewanella woodyi ATCC 51908]
 gi|238688724|sp|B1KQY3|THII_SHEWM RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|169813155|gb|ACA87739.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
           woodyi ATCC 51908]
          Length = 484

 Score = 58.8 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 62/196 (31%), Gaps = 27/196 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVEL 63
           +      L L SGG DS       + R  R     F+ G   +++           + ++
Sbjct: 176 MATQEDVLSLISGGFDSGVSSYQFIKRGSRTHYCFFNLGGDQHEIG----------VKQV 225

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                   GE H +    +           V  +I +             + +  AA +A
Sbjct: 226 AYHLWQKYGESHKVKFISI-------PFDPVVTEILEKIDNGQMGVILKRMMMRAAAKVA 278

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            ++GI  +V G      S         I      +         +  PL+ + K +   L
Sbjct: 279 RKMGIQALVTGEAMGQVSSQTLTNLSIIDRCTDQL---------ILRPLIAMDKQDIINL 329

Query: 184 AQDIGGQDLVNLILEE 199
           ++ IG +DL   I E 
Sbjct: 330 SRKIGTEDLSKSIPEY 345


>gi|170727050|ref|YP_001761076.1| tRNA-specific 2-thiouridylase MnmA [Shewanella woodyi ATCC 51908]
 gi|205816913|sp|B1KID0|MNMA_SHEWM RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|169812397|gb|ACA86981.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shewanella woodyi ATCC 51908]
          Length = 377

 Score = 58.8 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 56/186 (30%), Gaps = 9/186 (4%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS      L +  +VE L     + +  +  C       + +     
Sbjct: 16  NKKVIVGMSGGVDSSVSAYLLLKQGYQVEGLFMKNWEEDDTDEYCA--AADDLKDAQAVC 73

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATL 122
                + H +      +   +     +A          + + N  +  +  +        
Sbjct: 74  DKLGIKLHTVN--FASEYWDNVFEYFLAEYKAGRTPNPDIICNKEIKFKAFLEFADDILD 131

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A  + + + V    ++  S                  L  E       P+  L+K E  +
Sbjct: 132 ADYIAMGHYVRRSDDSGQSQMLRGIDGNKDQSYFLYTLSHEQVSRSLFPVGELEKSEVRE 191

Query: 183 LAQDIG 188
           +A+++G
Sbjct: 192 IAKEMG 197


>gi|317492930|ref|ZP_07951354.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919052|gb|EFV40387.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 482

 Score = 58.8 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------SAHEI--GVKQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +           V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAI-------DFAPVVGEILEKVDDGQMGVILKRMMMRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     +A++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDGVTDTL---------ILRPLISHDKEHIIDMAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|237730399|ref|ZP_04560880.1| thiamine biosynthesis protein ThiI [Citrobacter sp. 30_2]
 gi|226905938|gb|EEH91856.1| thiamine biosynthesis protein ThiI [Citrobacter sp. 30_2]
          Length = 482

 Score = 58.8 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 57/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISHDKEHIINLAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|218663598|ref|ZP_03519528.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhizobium etli IE4771]
          Length = 345

 Score = 58.8 bits (140), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 48/190 (25%), Gaps = 14/190 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS        +   V  ++   Y     V      C  + I +     +
Sbjct: 14  RVVVAMSGGVDSSVVAGLLKQQGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 73

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++    A        P   V     +        A  LG 
Sbjct: 74  TLGIPHYVLD---YEKRFRETVINPFAESYVAGETPIPCVSCNQTVKFADLLATAKELGA 130

Query: 129 TNIVIGVCETDYSGYPDCRH----------DTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             +  G                                      E    +  PL  L K 
Sbjct: 131 DALATGHYIRSRPNPSPEHPGRRALFRPADADRDQSYFLFATTQEQIDYLRFPLGGLPKA 190

Query: 179 ETWKLAQDIG 188
           ET +LA+++G
Sbjct: 191 ETRRLAEEMG 200


>gi|188583254|ref|YP_001926699.1| ExsB family protein [Methylobacterium populi BJ001]
 gi|179346752|gb|ACB82164.1| ExsB family protein [Methylobacterium populi BJ001]
          Length = 214

 Score = 58.8 bits (140), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 52/226 (23%), Gaps = 34/226 (15%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +LLFSGG DS+    W          L  DYGQR              I        ++L
Sbjct: 3   VLLFSGGLDSTALAWWQRPD----ACLFVDYGQRPAAGERAA---ATSIAAEFGLRLETL 55

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
             D              +            N     + G   +                +
Sbjct: 56  QVDLSGLGLGPLAGGEPAALARAPEWWPYRNQILVTLAGMRFV-------------AEGL 102

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
              +  T  +                +    E  V V  P   L           +    
Sbjct: 103 SEILIGTVATDVHADGRAPFLRTLDRLMRLQEGGVRVVAPARHLSGPAL------LAASG 156

Query: 192 LVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           L    L  + +C        +   Y C  C  C   ++    F  +
Sbjct: 157 LPASALGATFSC--------HVMEYACGQCRGCEKHRETLRSFGLR 194


>gi|225026476|ref|ZP_03715668.1| hypothetical protein EUBHAL_00725 [Eubacterium hallii DSM 3353]
 gi|224956215|gb|EEG37424.1| hypothetical protein EUBHAL_00725 [Eubacterium hallii DSM 3353]
          Length = 354

 Score = 58.8 bits (140), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 49/197 (24%), Gaps = 10/197 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR--KKIVELM 64
            A  AL+  SGG DSS       +       ++        + +           I +  
Sbjct: 1   MAKKALIAMSGGVDSSVAAYLMKEAGYDCIGVTMKLYDNEDIGMAREKTCCSLSDIEDAR 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     ++       D     +  N     Q+   PN  +     +        A 
Sbjct: 61  SVCVKLGIPYYVFN---FKDDFKEKVIDNFISCYQNGMTPNPCIECNRHLKFEHLYKRAK 117

Query: 125 RLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            L    IV G                   D+        +L  E       PL    K E
Sbjct: 118 VLHCDVIVTGHYAKITHDEQGYHLLKGVDDSKDQSYVLYSLTQEQLANTCFPLGDYSKTE 177

Query: 180 TWKLAQDIGGQDLVNLI 196
             K+A++ G  +     
Sbjct: 178 IRKIAEEQGFFNAHKHD 194


>gi|330813834|ref|YP_004358073.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Pelagibacter sp. IMCC9063]
 gi|327486929|gb|AEA81334.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Pelagibacter sp. IMCC9063]
          Length = 379

 Score = 58.8 bits (140), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 58/186 (31%), Gaps = 13/186 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIVELMPK 66
             ++  SGG DSST      ++   V  ++   +DYG+  K    C  C  K I +    
Sbjct: 25  KVVVAMSGGVDSSTVAGLLKEQNYHVIGITLQLYDYGKIGKTSGTC--CAGKDIYDAKRV 82

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +    E H+     L       + +  A        P   V     +        A +L
Sbjct: 83  SEQLNIEHHVFNYESL---FKEEVIEKFADSYLKGETPIPCVSCNQTVKFRDLFKSAKKL 139

Query: 127 GITNIVIGVC-----ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           G   +V G         + S                 +   E    +  PL  L K ET 
Sbjct: 140 GADALVTGHYVKRLGNLNQSKMYQPVDANRDQSYFLFSTTQEQLDYLRFPLADLPKQETR 199

Query: 182 KLAQDI 187
            LA+ +
Sbjct: 200 DLAKKM 205


>gi|228473347|ref|ZP_04058101.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Capnocytophaga gingivalis ATCC 33624]
 gi|228275249|gb|EEK14047.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Capnocytophaga gingivalis ATCC 33624]
          Length = 397

 Score = 58.8 bits (140), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 52/189 (27%), Gaps = 12/189 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS        +   V  L       + V +       +   + +   +
Sbjct: 2   KRVVVGLSGGVDSSVAAYLLQKQGYEVIGLFMKNWHDDSVTISNECPWLEDSNDALMVAE 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   + +++               + +    PN  V     I       LA  LG 
Sbjct: 62  KLGIPFQTVDMSVPYKQRIVDYMF---REYERGRTPNPDVLCNREIKFATFLDLALSLGA 118

Query: 129 TNI----VIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
             +         E +  G P  R                 L  E       P+  L+K E
Sbjct: 119 DYVATGHYCRKEEIEVDGKPIYRLLAGKDTNKDQSYFLCQLSQEQLSRALFPIGDLQKNE 178

Query: 180 TWKLAQDIG 188
              +A+++G
Sbjct: 179 VRAIAKELG 187


>gi|115523063|ref|YP_779974.1| tRNA-specific 2-thiouridylase MnmA [Rhodopseudomonas palustris
           BisA53]
 gi|115517010|gb|ABJ04994.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhodopseudomonas palustris BisA53]
          Length = 419

 Score = 58.8 bits (140), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 52/186 (27%), Gaps = 10/186 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSST  +        V  ++   Y     +  +   C  + I +     +
Sbjct: 34  RVVVAMSGGVDSSTTAALLKAEGYDVVGITLQLYDHGEAIHRKGACCAGQDIHDARTVAE 93

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           S+  + A        P   +     I      + A  LG 
Sbjct: 94  RIGIPHYVLD---YESRFRESVIDSFATSYATGETPVPCIECNRSIKFRDLLSTARELGA 150

Query: 129 TNIVIGVCETDYSGYPDCR------HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
             +  G   +        R                     E    +  PL  + K +T +
Sbjct: 151 AVLATGHYVSSRRLPDGSRALVCAADADRDQSYFLFATTREQLDFLRFPLGDMTKPQTRE 210

Query: 183 LAQDIG 188
           LA+  G
Sbjct: 211 LARSFG 216


>gi|304313061|ref|YP_003812659.1| Probable tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
           [gamma proteobacterium HdN1]
 gi|301798794|emb|CBL47027.1| Probable tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
           [gamma proteobacterium HdN1]
          Length = 387

 Score = 58.8 bits (140), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 52/195 (26%), Gaps = 16/195 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      ++  SGG DSS      L     VE L     + +     C       + +  
Sbjct: 1   MSHPKKVIVGMSGGVDSSVAAWLLLQEGYEVEGLFMKNWEEDDGTEYC--TALTDLADAQ 58

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     H    A         + +    + +    PN  +     I        A 
Sbjct: 59  QVADTLGIRLHT---ANFAAEYWDRVFEYFLAEYKGGRTPNPDILCNKEIKFRAFLDYAL 115

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH-----------TPLM 173
            LG   I  G   T            I  +   ++   +    +H            PL 
Sbjct: 116 TLGADAIATGHYATRGRNTQTEGGGEIAELCKGVDSNKDQSYFLHAVSGKQLAKTLFPLG 175

Query: 174 WLKKYETWKLAQDIG 188
            + K E  ++A++ G
Sbjct: 176 KMLKPEVRRIAKEQG 190


>gi|301607403|ref|XP_002933290.1| PREDICTED: LOW QUALITY PROTEIN: GMP synthase
           [glutamine-hydrolyzing]-like [Xenopus (Silurana)
           tropicalis]
          Length = 702

 Score = 58.8 bits (140), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 56/197 (28%), Gaps = 11/197 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +   L+L SGG DS+ C +        D+V  +  D G   K E +      KK+   + 
Sbjct: 236 SSKVLVLLSGGVDSTVCTALLNKALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVK 295

Query: 66  KW-KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                    +    L I  +        +  + +  N      + G   + +        
Sbjct: 296 VVNAAHSFYNGTTTLPISDEDRTPRKRISKTLNMTTNPEEKRKIIGDTFVKIANEVIGEM 355

Query: 125 RLGITNIV--------IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
            L    +           +                   +T +   +     V  PL    
Sbjct: 356 NLNPEEVFLAQGTLRPDLIESASLIASVKAEVIKTHHNDTELIRKLREEGKVIEPLKDFH 415

Query: 177 KYETWKLAQDIGGQDLV 193
           K E   L +++G  + +
Sbjct: 416 KDEVRVLGRELGLPEEL 432


>gi|119512160|ref|ZP_01631251.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Nodularia spumigena CCY9414]
 gi|119463191|gb|EAW44137.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Nodularia spumigena CCY9414]
          Length = 351

 Score = 58.8 bits (140), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 53/187 (28%), Gaps = 15/187 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSST  +    +   V  L+        +      C  + +++     +
Sbjct: 2   KKVVVGLSGGVDSSTAAAILHHQGYEVIGLTL------WLMKGKGQCCSEGMIDAADICE 55

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                  ++ +  +                      +          +V  A    +L  
Sbjct: 56  QLGVPHEVVDIREVFQTQIVDFLVTGYSAGITPLPCSQCNKTVKFGPMVQYAR--EKLDC 113

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH-------TPLMWLKKYETW 181
             I  G            R+  +RA++   +     +            PL  L K +T 
Sbjct: 114 DRIATGHYAQINYDEATGRYQLLRAVDRNKDQSYFLYDLSQELLKATVFPLGKLDKADTR 173

Query: 182 KLAQDIG 188
           ++A + G
Sbjct: 174 RIAAEYG 180


>gi|78186206|ref|YP_374249.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chlorobium luteolum DSM 273]
 gi|123583498|sp|Q3B625|MNMA_PELLD RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|78166108|gb|ABB23206.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chlorobium luteolum DSM 273]
          Length = 367

 Score = 58.8 bits (140), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 50/191 (26%), Gaps = 15/191 (7%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +K    ++  SGG DSS      +     V  L     Q               ++E 
Sbjct: 1   MERKKKKVIVGLSGGVDSSVAACMLVREGYEVLGLHLKVLQEGDGST---------VLEP 51

Query: 64  MPKWKDSLGEDHI-LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
            P    S  E HI +    L     + +      +      PN  +     I        
Sbjct: 52  SPMTISSREEFHIPVFTLNLAARFRNEVMDYFKEEYLAARTPNPCMVCNKTIKWRGLLEG 111

Query: 123 AYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKK 177
           A +LG   +  G            R                 L  E       PL  L K
Sbjct: 112 AAQLGADMVATGHYARTAFIDGRHRLFAGLDRKKDQSYFLWMLAQEELSRTILPLGGLTK 171

Query: 178 YETWKLAQDIG 188
            E   LA+  G
Sbjct: 172 PEVRDLARSFG 182


>gi|305667726|ref|YP_003864013.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Maribacter sp. HTCC2170]
 gi|88709776|gb|EAR02009.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Maribacter sp. HTCC2170]
          Length = 396

 Score = 58.8 bits (140), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 50/188 (26%), Gaps = 13/188 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS       ++   V  L       + V +       +   + +   +
Sbjct: 2   KKVVIGLSGGVDSSVAAYLLKEQGYEVIGLFMKNWHDDSVTISEECPWLEDSNDALIVAE 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   + L++           N     +    PN  V     I       +A +LG 
Sbjct: 62  KLGIPFQTVDLSVEYKERIVDYMFNE---YERGRTPNPDVLCNREIKFDVFLKIALQLGA 118

Query: 129 TNIVIGVCETDYSGYPDCR----------HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             +  G      +   D             D          L  E       P+  L K 
Sbjct: 119 DYVATGHYCRKGTLVNDKGEETFQLLSGKDDNKDQSYFLCQLSQEQLSKTLFPIGNLTKP 178

Query: 179 ETWKLAQD 186
           E  ++A D
Sbjct: 179 EVRQIAAD 186


>gi|57241962|ref|ZP_00369902.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter upsaliensis RM3195]
 gi|57017154|gb|EAL53935.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter upsaliensis RM3195]
          Length = 338

 Score = 58.8 bits (140), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 43/176 (24%), Gaps = 10/176 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DS+            V          +         + K    +    K 
Sbjct: 2   KILVAMSGGVDSTVTAYKLKKAGHEVIGCYMK---LHGKPGYHEENIAK----VEKVAKF 54

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                HIL    L +   + +        ++   PN        I L      A  LG  
Sbjct: 55  LQIPYHILD---LQEDFKAKVYMPFINTYKEGKTPNPCALCNRFIKLGKLLEFAKNLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            +  G      +G      D  +     +    +  +      +   K E  K   
Sbjct: 112 KLATGHYARLENGCIKVAVDESKDQSYFLANADKEALQYLIFPLGEMKKEDVKKFA 167


>gi|226330495|ref|ZP_03806013.1| hypothetical protein PROPEN_04413 [Proteus penneri ATCC 35198]
 gi|225201290|gb|EEG83644.1| hypothetical protein PROPEN_04413 [Proteus penneri ATCC 35198]
          Length = 367

 Score = 58.8 bits (140), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 53/192 (27%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++  +V  L     + +     C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLKEQGYQVVGLFMKNWEEDDDTEYCS--ASTDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E + +      +   +     ++            +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIELYTIN--FAAEYWDNVFEHFLSEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G            +      +          L  E       P+  +
Sbjct: 115 YAAEDLGADYIATGHYVRRRDINGKSQLLRGVDNNKDQSYFLYTLSHEQIAQSLFPVGEM 174

Query: 176 KKYETWKLAQDI 187
           +K E  K+A+ +
Sbjct: 175 EKPEVRKIAEKL 186


>gi|218675488|ref|ZP_03525157.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhizobium etli GR56]
          Length = 399

 Score = 58.8 bits (140), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 48/190 (25%), Gaps = 14/190 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS        +   V  ++   Y     V      C  + I +     +
Sbjct: 14  RVVVAMSGGVDSSVVAGLLKQQGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 73

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++    A        P   V     +        A  LG 
Sbjct: 74  TLGIPHYVLD---YEKRFRETVINPFAESYVAGETPIPCVSCNQTVKFADLLATAKELGA 130

Query: 129 TNIVIGVCETDYSGYPDCRH----------DTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             +  G                                      E    +  PL  L K 
Sbjct: 131 DALATGHYIRSRPNPSLEHPGRRALFRPADADRDQSYFLFATTQEQIDYLRFPLGGLPKA 190

Query: 179 ETWKLAQDIG 188
           ET +LA+++G
Sbjct: 191 ETRRLAEEMG 200


>gi|294084590|ref|YP_003551348.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Puniceispirillum marinum IMCC1322]
 gi|292664163|gb|ADE39264.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 419

 Score = 58.4 bits (139), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 55/185 (29%), Gaps = 9/185 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +   D    V  ++   Y     V+ +   C    I +      
Sbjct: 46  RVVVAMSGGVDSSVTAAMLHDEGYEVIGITLQLYDHGVAVQTKGACCAGIDIHDARTVSA 105

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L            + ++ A        P   V     +      T A  LG 
Sbjct: 106 RLGIPHYVLD---YESKFRDQVMEDFADSYLRGETPIPCVRCNQTVKFTDLLTTAQELGA 162

Query: 129 TNIV--IGVCETDYSGYPDCRHDTIRAIETAINL---GMESHVTVHTPLMWLKKYETWKL 183
             +     V   +    P  R     + + +  L     E    +  PL  L K ET  L
Sbjct: 163 DCLATGHYVQRLETPAGPVLRRGIDASKDQSYFLFATTAEQMDYLRFPLGGLTKDETRDL 222

Query: 184 AQDIG 188
           A+  G
Sbjct: 223 ARKYG 227


>gi|42528068|ref|NP_973166.1| thiamine biosynthesis protein ThiI [Treponema denticola ATCC 35405]
 gi|41819113|gb|AAS13085.1| thiamine biosynthesis protein ThiI [Treponema denticola ATCC 35405]
          Length = 387

 Score = 58.4 bits (139), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 52/181 (28%), Gaps = 25/181 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS       L R  +++ + F                + K+ +L               
Sbjct: 186 IDSPVAGFKMLTRGMKLDYIYFH------SHPYTSPEAQAKVEKLADILAGY-------- 231

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
              LG   +      V  +I++ +          I  +  A   A  +    ++ G    
Sbjct: 232 --GLGGYLNIIPFTKVQHQIREKSPEAYLTLMMRICMMKIANMTARGINSKCLITGESLA 289

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
             +          + +E        +   V  PL+ L K E    A++IG  +   L  E
Sbjct: 290 QVAS---------QTVENLTVTNSYAEFPVFRPLIGLDKEEITIEAKEIGTYETSILPYE 340

Query: 199 E 199
           +
Sbjct: 341 D 341


>gi|332158483|ref|YP_004423762.1| n-type ATP pyrophosphatase superfamily protein [Pyrococcus sp. NA2]
 gi|331033946|gb|AEC51758.1| n-type ATP pyrophosphatase superfamily protein [Pyrococcus sp. NA2]
          Length = 273

 Score = 58.4 bits (139), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 40/97 (41%), Gaps = 1/97 (1%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
           + +I+K+   A++ +SGG+DS+  L  A ++    VE +  D+G  +   +E    V K 
Sbjct: 45  LEEILKEIDRAIVAYSGGKDSTVALYLAKEKYGIDVEAVLVDHGFMDPRAIENAREVTKY 104

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAM 96
           +   +   K    +     L            + + +
Sbjct: 105 LGVPLTIIKRDYSDIFREALLKAKSPCRKCSKRTMEI 141


>gi|225012689|ref|ZP_03703124.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Flavobacteria bacterium MS024-2A]
 gi|225003222|gb|EEG41197.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Flavobacteria bacterium MS024-2A]
          Length = 394

 Score = 58.4 bits (139), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 44/190 (23%), Gaps = 13/190 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS            V  L         V L       +   + M  
Sbjct: 2   NKGRIIVGLSGGVDSSVAAYLLKKEGYEVIGLFMKNWHDETVTLSNECPWLEDSNDAMLV 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +        +    L       +   +  +      PN  V     I       +A  L
Sbjct: 62  AEKLGIPFQTVD---LSKEYKERIVDYMFDEYSKGRTPNPDVLCNREIKFDVFLEIALSL 118

Query: 127 GITNI----------VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
           G   +                           +          L  +    V  P+  L+
Sbjct: 119 GADYVATGHYCQKTFFATPSGDHIHQLKSGADNNKDQSYFLCQLNQKQLSHVLFPIGHLQ 178

Query: 177 KYETWKLAQD 186
           K E  K+A +
Sbjct: 179 KEEVRKIALE 188


>gi|168181589|ref|ZP_02616253.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum Bf]
 gi|237796359|ref|YP_002863911.1| tRNA-specific 2-thiouridylase MnmA [Clostridium botulinum Ba4 str.
           657]
 gi|182675018|gb|EDT86979.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum Bf]
 gi|229264171|gb|ACQ55204.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum Ba4 str. 657]
          Length = 353

 Score = 58.4 bits (139), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 52/188 (27%), Gaps = 13/188 (6%)

Query: 7   KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
            +   + L  SGG DSS       +R   V  +  D   R++ E  C     +    +  
Sbjct: 1   MSKGTVALAMSGGVDSSVSAYILKERGYDVIGIYMDLW-RDEREEYCNKSAAEDARRVAE 59

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           K        H++    +G    +++      +      PN  V     I        A  
Sbjct: 60  KLD---IPFHVIN---IGKEFKANVIDYFIDEYLSGRTPNPCVACNKTIKFEAFFNAAKE 113

Query: 126 LGITNIVIGVCETDYSGYPDC-----RHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            G   +  G                   D         NL          P    +K   
Sbjct: 114 FGADFMATGHYCKIEERNRRKVIVKAEDDKKDQTYMMYNLKQYQLERTIMPCGEYRKEHI 173

Query: 181 WKLAQDIG 188
            ++A++IG
Sbjct: 174 REIAENIG 181


>gi|304395485|ref|ZP_07377368.1| thiamine biosynthesis/tRNA modification protein ThiI [Pantoea sp.
           aB]
 gi|304356779|gb|EFM21143.1| thiamine biosynthesis/tRNA modification protein ThiI [Pantoea sp.
           aB]
          Length = 482

 Score = 58.4 bits (139), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 58/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       L R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLLRRGSRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+T+A R G+  
Sbjct: 231 FGRSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASTIAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K    ++A++IG +
Sbjct: 284 LVTGEAVGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIIRIAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|308190162|ref|YP_003923093.1| thiamine biosynthesis ATP pyrophosphatase [Mycoplasma fermentans
           JER]
 gi|319777467|ref|YP_004137118.1| thiamine biosynthesis protein thii [Mycoplasma fermentans M64]
 gi|307624904|gb|ADN69209.1| thiamine biosynthesis ATP pyrophosphatase [Mycoplasma fermentans
           JER]
 gi|318038542|gb|ADV34741.1| Probable thiamine biosynthesis protein ThiI [Mycoplasma fermentans
           M64]
          Length = 377

 Score = 58.4 bits (139), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 60/187 (32%), Gaps = 25/187 (13%)

Query: 14  LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
           L SGG DS       + R  +V  LSF          +       K+ EL+         
Sbjct: 171 LMSGGIDSPVAAFQLMKRGLKVNFLSF------ITPPQTDQATVNKMKELIKILTKYQ-- 222

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
                 +     ++S+L   +A+    N      +  R+   +      + +        
Sbjct: 223 ----NTSTFYLANYSTLMNYIALV--SNQAYKITLMRRSFYRIAAKLAQSKKNLAI---- 272

Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
                  S   +      + +E+   +  + ++ +  PL+   K ET  LA+ I   DL 
Sbjct: 273 -------SNGENLGQVASQTLESLYTISHDINMPILRPLLTNDKIETINLAKKIQTYDLS 325

Query: 194 NLILEES 200
                E+
Sbjct: 326 ITKCNET 332


>gi|238809549|dbj|BAH69339.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 377

 Score = 58.4 bits (139), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 60/187 (32%), Gaps = 25/187 (13%)

Query: 14  LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
           L SGG DS       + R  +V  LSF          +       K+ EL+         
Sbjct: 171 LMSGGIDSPVAAFQLMKRGLKVNFLSF------ITPPQTDQATVNKMKELIKILTKYQ-- 222

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
                 +     ++S+L   +A+    N      +  R+   +      + +        
Sbjct: 223 ----NTSTFYLANYSTLMNYIALV--SNQAYKITLMRRSFYRIAAKLAQSKKNLAI---- 272

Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
                  S   +      + +E+   +  + ++ +  PL+   K ET  LA+ I   DL 
Sbjct: 273 -------SNGENLGQVASQTLESLYTISHDINMPILRPLLTNDKIETINLAKKIQTYDLS 325

Query: 194 NLILEES 200
                E+
Sbjct: 326 ITKCNET 332


>gi|225174584|ref|ZP_03728582.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Dethiobacter alkaliphilus AHT 1]
 gi|225169711|gb|EEG78507.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Dethiobacter alkaliphilus AHT 1]
          Length = 366

 Score = 58.4 bits (139), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 55/196 (28%), Gaps = 15/196 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL-----CVRKK 59
           +KK    L+  SGG DSS C +   ++      ++         E E +      C    
Sbjct: 1   MKKNNRVLVAMSGGVDSSLCAALLKEQGYEAIGVTMRLWVSPDFEDEAKHSGRGCCSLSA 60

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           + +            ++L      +   + +      + +    PN  +     +     
Sbjct: 61  VDDARRVADKMEMPFYVLN---FKESFRTQVVDYFVDEYRRGRTPNPCIACNRYLKFDLL 117

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRA-------IETAINLGMESHVTVHTPL 172
              A+ L    +  G            R    +A         T  NL  +       PL
Sbjct: 118 LKKAFELEAWYVATGHYARVEYDESLERFRLKKAADARKDQTYTLYNLTQKQLAHTLFPL 177

Query: 173 MWLKKYETWKLAQDIG 188
               K E  ++A   G
Sbjct: 178 GGFLKSEVREMAAKYG 193


>gi|149376491|ref|ZP_01894252.1| thiamine biosynthesis protein ThiI [Marinobacter algicola DG893]
 gi|149359158|gb|EDM47621.1| thiamine biosynthesis protein ThiI [Marinobacter algicola DG893]
          Length = 484

 Score = 58.4 bits (139), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 58/198 (29%), Gaps = 30/198 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            + + L SGG DSS      + R  R   L F  G            +   + +++    
Sbjct: 179 ETVMTLVSGGYDSSVAAYLMMRRGLRSHFLFFSLGGP-------AHEI--GVRQVVHYLW 229

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D  G  H       G    S   + V  +I  +     +        L  A+ +A     
Sbjct: 230 DRYGASH-------GAKFISVPFEGVVAEIMRSVNQRHWGVVLKRQMLKAASDIAAANNA 282

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G      S       + +      +         V  PL+ + K     +A+DIG
Sbjct: 283 AGLVTGDAVAQVSSQTLSNLNVVDRASNEV---------VLRPLISMDKETIINIARDIG 333

Query: 189 GQDLVNLILEESHTCYLG 206
                      +   Y G
Sbjct: 334 T-----EPFARTMPEYCG 346


>gi|85058637|ref|YP_454339.1| thiamine biosynthesis protein ThiI [Sodalis glossinidius str.
           'morsitans']
 gi|123519928|sp|Q2NV91|THII_SODGM RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|84779157|dbj|BAE73934.1| thiamine biosynthesis protein ThiI [Sodalis glossinidius str.
           'morsitans']
          Length = 483

 Score = 58.4 bits (139), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 58/196 (29%), Gaps = 30/196 (15%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++       
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVNYCFFNLGG-------AAHEI--GVRQVAHHLWRR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G+ H +    L      +   N  +   ++      +    +     A+ +A R GI  
Sbjct: 231 FGQSHKVRFVSL----DFAPVVNEILAKVEDGQMGIVLKRMMV---RAASAIAERYGIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K     LA  IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIITLAHQIGTE 334

Query: 191 DLVNLILEESHTCYLG 206
           +       ++   Y G
Sbjct: 335 E-----YAKTMPEYCG 345


>gi|310778027|ref|YP_003966360.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ilyobacter polytropus DSM 2926]
 gi|309747350|gb|ADO82012.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ilyobacter polytropus DSM 2926]
          Length = 356

 Score = 58.4 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 20/161 (12%), Positives = 40/161 (24%), Gaps = 5/161 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR--KKIVELM 64
                ++  SGG DSS       +    V  ++  +      E            I +  
Sbjct: 1   MKKKVVVGMSGGVDSSVAAYLLKEEGYEVIGVTLKHLSDEDSENTNTKTCCSLDDIYDAK 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     +++      +     +      +      P+  V     I +   A  A 
Sbjct: 61  MACFKLGIPHYVVD---AVEPFKKDVIDYFIGEYSKGITPSPCVVCDEKIKIKKLAETAD 117

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH 165
           +LG   I  G             H    +  +A +     +
Sbjct: 118 KLGADYISTGHYCDVSYSQELGSHLLKLSKNSAKDQTYMLY 158


>gi|300814084|ref|ZP_07094367.1| thiamine biosynthesis/tRNA modification protein ThiI [Peptoniphilus
           sp. oral taxon 836 str. F0141]
 gi|300511741|gb|EFK38958.1| thiamine biosynthesis/tRNA modification protein ThiI [Peptoniphilus
           sp. oral taxon 836 str. F0141]
          Length = 394

 Score = 58.4 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 52/181 (28%), Gaps = 25/181 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS         R   ++ L F                 +K+++L  K     G+  +  
Sbjct: 188 IDSPVAGFLMAKRGIALDVLHFH------SYPFTSQRGEEKVIKLAEKISSFSGKMTMYS 241

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
           + +L          N+  +I  N   +          +  A  L+       I+ G    
Sbjct: 242 VNLL----------NIQKEINKNCPEDQMTLLSRRFMMRIADKLSLDNSYDAIITGENLG 291

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
             +            I   +         V  PL+ + K     +A++IG  +   L  E
Sbjct: 292 QVASQTIDGLKVTDIITRKL---------VFRPLIGMDKINIIDIAREIGTYETSILPFE 342

Query: 199 E 199
           +
Sbjct: 343 D 343


>gi|118602730|ref|YP_903945.1| tRNA-specific 2-thiouridylase MnmA [Candidatus Ruthia magnifica
           str. Cm (Calyptogena magnifica)]
 gi|166235080|sp|A1AX17|MNMA_RUTMC RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|118567669|gb|ABL02474.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Ruthia magnifica str. Cm (Calyptogena
           magnifica)]
          Length = 363

 Score = 58.4 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 40/136 (29%), Gaps = 5/136 (3%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
             + K    ++  SGG DSS      L +  +VE L     + +     C   V + + +
Sbjct: 2   KNLNKNTKIIVGLSGGVDSSVATLLLLKQGYQVEALFMKNWEEDDKSGYCS--VEQDLSD 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     + H +          + +  +   + +    PN  V     I        
Sbjct: 60  AQKIADKLDVKLHAVN---FSADYWNDVFIHFLKEHKKGRTPNPDVLCNQKIKFRVFLEH 116

Query: 123 AYRLGITNIVIGVCET 138
           A  LG   I  G    
Sbjct: 117 ALSLGADKIATGHYAR 132


>gi|83590486|ref|YP_430495.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Moorella thermoacetica ATCC 39073]
 gi|123524262|sp|Q2RHY7|MNMA_MOOTA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|83573400|gb|ABC19952.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Moorella thermoacetica ATCC 39073]
          Length = 357

 Score = 58.4 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 48/188 (25%), Gaps = 12/188 (6%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIVELMPKWKD 69
           ++  SGG DSST  +   +    V  ++      +      E   C  K + +       
Sbjct: 1   MVAMSGGVDSSTAAALLKEAGYEVIGVTLALWPEDTPPPPGETGCCSLKAVDDARRVANI 60

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                ++L    L +               +   PN  +     I        A  LGI 
Sbjct: 61  LDIPYYVLNFRDLFEREVIDYFIAS---YLEGETPNPCIACNRRIKFGALLAKARALGID 117

Query: 130 NIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
            I  G     +      R+                     E       PL    K E  +
Sbjct: 118 YIATGHYARRWYDKEKGRYLLARGRDAGKDQSYALYTFTQEQLAHTLLPLGDYTKVEVRE 177

Query: 183 LAQDIGGQ 190
           +A   G  
Sbjct: 178 IAARYGLP 185


>gi|254173021|ref|ZP_04879695.1| ATPase, PP-loop superfamily [Thermococcus sp. AM4]
 gi|214033177|gb|EEB74005.1| ATPase, PP-loop superfamily [Thermococcus sp. AM4]
          Length = 306

 Score = 58.4 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 23/69 (33%), Gaps = 2/69 (2%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKK 59
             ++K     L++ SGG+DS+            +E L  + G     E          + 
Sbjct: 43  YKMLKPDERVLVVVSGGKDSAVTAYILKKLGYNIECLHINLGIGEYSEKSESYAKKQCEA 102

Query: 60  IVELMPKWK 68
           +   +   +
Sbjct: 103 LGVPLHIVR 111


>gi|222086955|ref|YP_002545489.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase protein
           [Agrobacterium radiobacter K84]
 gi|254811443|sp|B9J9F7|MNMA_AGRRK RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|221724403|gb|ACM27559.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase protein
           [Agrobacterium radiobacter K84]
          Length = 399

 Score = 58.4 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 47/190 (24%), Gaps = 14/190 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS        +   V  ++   Y     V      C  + I +     +
Sbjct: 14  RVVVAMSGGVDSSVVAGILKRQGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 73

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++    A        P   V     +        A  LG 
Sbjct: 74  TIGIPHYVLD---YEKRFRETVINPFAESYVAGETPIPCVSCNQTVKFADLLATAKELGA 130

Query: 129 TNIVIGVCETDYSGYPDCRH----------DTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             +  G                                      E    +  PL  + K 
Sbjct: 131 DALATGHYIRSRPNPSADHPGRRALYRPADADRDQSYFLFATTQEQIDYLRFPLGGMPKA 190

Query: 179 ETWKLAQDIG 188
           ET  LA+++G
Sbjct: 191 ETRALAEEMG 200


>gi|86751223|ref|YP_487719.1| tRNA-specific 2-thiouridylase MnmA [Rhodopseudomonas palustris
           HaA2]
 gi|86574251|gb|ABD08808.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhodopseudomonas palustris HaA2]
          Length = 402

 Score = 58.4 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 54/204 (26%), Gaps = 19/204 (9%)

Query: 1   MNDII---------KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVEL 50
           M D +          +    ++  SGG DSS   +    +   V  ++   Y        
Sbjct: 1   MTDTMLNSLDLAGRPQDTRVVVAMSGGVDSSATAALLKSQGYDVVGITLQLYDHGAATHR 60

Query: 51  ECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPG 110
           +   C  + I +     +      ++L           S+  + A        P   +  
Sbjct: 61  KGACCAGQDIHDARDVAERIGIPHYVLD---YESRFRESVIDSFADSYALGETPVPCIEC 117

Query: 111 RNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCR------HDTIRAIETAINLGMES 164
              +        A  LG + +  G   +        R                     E 
Sbjct: 118 NRSVKFRDLLATARELGASALATGHYVSSRRLADGSRALICAADRDRDQSYFLFATTREQ 177

Query: 165 HVTVHTPLMWLKKYETWKLAQDIG 188
              +  PL  + K +T  LA+  G
Sbjct: 178 LDFLRFPLGDMTKPQTRDLARQFG 201


>gi|87198069|ref|YP_495326.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Novosphingobium aromaticivorans DSM 12444]
 gi|123487802|sp|Q2G2Z1|MNMA_NOVAD RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|87133750|gb|ABD24492.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Novosphingobium aromaticivorans DSM 12444]
          Length = 384

 Score = 58.4 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 52/187 (27%), Gaps = 13/187 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIVELMPK 66
             ++  SGG DSS     A      V  ++   +DYG       +   C    I +    
Sbjct: 24  RIVVAMSGGVDSSVVAGLAAATGAEVIGVTLQLYDYG--AATGRKGACCAGDDIRDARAV 81

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   ++             + +  A        P   V             +A  L
Sbjct: 82  ADRLGIAHYVFDH---ESSFREEVVERFADDYLSGRTPIPCVRCNMGPKFTDLLAMAREL 138

Query: 127 GITNIVIGVCETDY---SGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETW 181
           G   +  G         +G    R       ++    G        +  PL  L K ET 
Sbjct: 139 GADCLATGHYVRRVMGPAGPELHRAVDPARDQSYFLYGTTEEQLAFLRFPLGGLPKTETR 198

Query: 182 KLAQDIG 188
            +A+++G
Sbjct: 199 LIAEELG 205


>gi|282882808|ref|ZP_06291413.1| thiamine biosynthesis/tRNA modification protein ThiI [Peptoniphilus
           lacrimalis 315-B]
 gi|281297219|gb|EFA89710.1| thiamine biosynthesis/tRNA modification protein ThiI [Peptoniphilus
           lacrimalis 315-B]
          Length = 394

 Score = 58.4 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 52/181 (28%), Gaps = 25/181 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS         R   ++ L F                 +K+++L  K     G+  +  
Sbjct: 188 IDSPVAGFLMAKRGIALDVLHFH------SYPFTSQRGEEKVIKLAEKISSFSGKMTMYS 241

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
           + +L          N+  +I  N   +          +  A  L+       I+ G    
Sbjct: 242 VNLL----------NIQKEINKNCPEDQMTLLSRRFMMRIADKLSLDNSYDAIITGENLG 291

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
             +            I   +         V  PL+ + K     +A++IG  +   L  E
Sbjct: 292 QVASQTIDGLKVTDIITRKL---------VFRPLIGMDKINIIDIAREIGTYETSILPFE 342

Query: 199 E 199
           +
Sbjct: 343 D 343


>gi|183601045|ref|ZP_02962538.1| hypothetical protein PROSTU_04666 [Providencia stuartii ATCC 25827]
 gi|188019383|gb|EDU57423.1| hypothetical protein PROSTU_04666 [Providencia stuartii ATCC 25827]
          Length = 483

 Score = 58.4 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVKQIAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHKVRFIAVN-------FEPVVAEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I      +         V  PL+   K    K+A+ IG +
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDNASDTL---------VLRPLISHDKEHIIKIARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|163794310|ref|ZP_02188282.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [alpha
           proteobacterium BAL199]
 gi|159180478|gb|EDP64999.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [alpha
           proteobacterium BAL199]
          Length = 394

 Score = 58.4 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 50/189 (26%), Gaps = 9/189 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELM 64
           + A   ++  SGG DSS   +   +    V  ++   Y     V  +   C    I +  
Sbjct: 16  RSARRVVVAMSGGVDSSVTAALLKEAGYDVVGITLQLYDHGAAVARKGACCAGSDIHDAR 75

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +      ++L           S+  + A        P   V     +      T A 
Sbjct: 76  TVAERLGIPHYVLD---YESRFRESVIDDFADSYLRGETPIPCVRCNQTVKFRDLLTTAR 132

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDT-----IRAIETAINLGMESHVTVHTPLMWLKKYE 179
            LG   +  G       G                         E    +  PL  + K  
Sbjct: 133 DLGAEALATGHYVRRVLGPDGPELHRAVDPGKDQSYFLFATTPEQLAFLRFPLGSMSKEA 192

Query: 180 TWKLAQDIG 188
           T   A+ +G
Sbjct: 193 TRDEARRLG 201


>gi|327405404|ref|YP_004346242.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fluviicola taffensis DSM 16823]
 gi|327320912|gb|AEA45404.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fluviicola taffensis DSM 16823]
          Length = 392

 Score = 58.4 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 47/186 (25%), Gaps = 9/186 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS            V  L         V L           + +   +
Sbjct: 2   KRVVVGLSGGVDSSVTAHLLQQEGYEVIGLFMRNWHDETVTLSNDCPWIDDSNDALLIAE 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                  +L    L       +   +  + +    PN  V     I        A  LG 
Sbjct: 62  QLGIPFQVLD---LSKEYKERIVDYMFAEYEAGRTPNPDVLCNREIKFDVFLKAAMELGA 118

Query: 129 TNIVIGVCETDYSGYPDCRH------DTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
             +  G      +      H                 L  +       P+  L+K E   
Sbjct: 119 DFVATGHYCRKITTEDGIHHLLTGLDPNKDQSYFLCQLSQDQLSKALFPIGNLQKSEVRA 178

Query: 183 LAQDIG 188
           +A++IG
Sbjct: 179 IAKEIG 184


>gi|262306087|gb|ACY45636.1| gln amidotransferase [Periplaneta americana]
          Length = 197

 Score = 58.4 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 35/105 (33%), Gaps = 2/105 (1%)

Query: 8   APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +   L+L SGG DS+ C +      R D+V  +  D G   K E +      +K+   + 
Sbjct: 43  SNKVLMLVSGGVDSTVCAALLHKALREDQVIAVHIDNGFMRKNESQRVEQSLEKLGLRLK 102

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPG 110
               S    H      +     +S T+   M     N        
Sbjct: 103 VINASHQFLHGTTTIPMDKREPNSRTRVTKMLCMTTNPEEKRKII 147


>gi|145299593|ref|YP_001142434.1| thiamine biosynthesis protein ThiI [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|189030615|sp|A4SP64|THII_AERS4 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|142852365|gb|ABO90686.1| thiamine biosynthesis protein ThiI [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 482

 Score = 58.4 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 54/188 (28%), Gaps = 25/188 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      L L SGG DS       + R  RV    F+ G            +   + ++ 
Sbjct: 174 MATQEDVLSLLSGGFDSGVASYQFIKRGCRVHYCFFNLGG-------AAHEI--GVKQVA 224

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  G  H +    +         + V  +I +             + +  A  +A 
Sbjct: 225 YYLWSKFGASHKVRFTAI-------DFEPVVAEILEKVDNGQMGVVLKRMMMRAAGQVAD 277

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
              I  +V G C    S       + I  +   +         +  PL+   K +    A
Sbjct: 278 YFQIPALVTGECVGQVSSQTLTNLNVIDRVTDKV---------ILRPLITWDKPDIISEA 328

Query: 185 QDIGGQDL 192
           + IG  + 
Sbjct: 329 RRIGTLEF 336


>gi|229586563|ref|YP_002845064.1| tRNA-specific 2-thiouridylase MnmA [Rickettsia africae ESF-5]
 gi|259495837|sp|C3PN11|MNMA_RICAE RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|228021613|gb|ACP53321.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rickettsia africae ESF-5]
          Length = 365

 Score = 58.4 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 55/194 (28%), Gaps = 9/194 (4%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKK 59
           M ++  K  + ++  SGG DSS   +   ++   V  ++   Y     V  +   C  + 
Sbjct: 1   MINLGDKQSTIVVAMSGGVDSSAVAAMLHEQGHNVIGITLQLYDHGMAVGKKNACCAGQD 60

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           I +            ++L           S+  N          P   V     +     
Sbjct: 61  IYDAKMVANKLGIPHYVLD---YESKFKESVIDNFVDSYLQGETPLPCVQCNKSVKFRDL 117

Query: 120 ATLAYRLGITNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
              A  LG   +     V  +   + +                     E    +  PL  
Sbjct: 118 IKTARELGADKLATGHYVRKINGDNGAELHTGLDPAKDQSYFLFTTTKEQLEYLRFPLGG 177

Query: 175 LKKYETWKLAQDIG 188
           L K ET KLA   G
Sbjct: 178 LTKDETRKLASKFG 191


>gi|313899439|ref|ZP_07832949.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Clostridium sp. HGF2]
 gi|312955727|gb|EFR37385.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Clostridium sp. HGF2]
          Length = 430

 Score = 58.4 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 56/186 (30%), Gaps = 20/186 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K    LL  SGG DSS   +  L     ++  +  ++G   K E E  + V K  ++   
Sbjct: 134 KDRKVLLALSGGVDSSVVAALLLKAIGKQLYCVHVNHGLMRKGESESVIEVFKNQMDANL 193

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            + D+           LG +   +  +     I    +       R +            
Sbjct: 194 IYVDA-------SERFLGKLKDVAEPEQKRKIIGAEFIRVFEEEARKL------------ 234

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            GI  +  G    D           +++      L  +    +  PL  L K E      
Sbjct: 235 KGIDFLAQGTIYPDIVESGTKTAKVVKSHHNVGGLPDDLAFELVEPLRQLFKDEVRACGL 294

Query: 186 DIGGQD 191
           ++G   
Sbjct: 295 ELGLPH 300


>gi|227823283|ref|YP_002827255.1| tRNA-specific 2-thiouridylase MnmA [Sinorhizobium fredii NGR234]
 gi|254811457|sp|C3MI00|MNMA_RHISN RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|227342284|gb|ACP26502.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sinorhizobium fredii NGR234]
          Length = 398

 Score = 58.4 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 46/190 (24%), Gaps = 14/190 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS            V  ++   Y     V      C  + I +     +
Sbjct: 14  RVVVAMSGGVDSSVVAGLLKREGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 73

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++    A        P   V     +        A  LG 
Sbjct: 74  TLGIPHYVLD---YEARFRETVINPFAESYIAGETPIPCVACNQTVKFADLLATAKELGA 130

Query: 129 TNIVIGVCETDYSGYPD----------CRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             +  G                                      E    +  PL  L K 
Sbjct: 131 DALATGHYIRSRPSPKPRYQGQRALYRPTDAERDQSYFLFATTQEQIDYLRFPLGNLSKP 190

Query: 179 ETWKLAQDIG 188
           ET  LA+++G
Sbjct: 191 ETRALAEEMG 200


>gi|315635922|ref|ZP_07891184.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Arcobacter butzleri JV22]
 gi|315479901|gb|EFU70572.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Arcobacter butzleri JV22]
          Length = 367

 Score = 58.4 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 56/188 (29%), Gaps = 14/188 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV----RKKI 60
           + K    ++  SGG DSS        +   V  L     +      +C   +     KK+
Sbjct: 1   MNKNKKIVVGMSGGVDSSVTALLLKQQGYDVVGLFMRNWEYGIKGSQCPNRIEFEDAKKV 60

Query: 61  VELMPKW---KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
             L+      KD + E       +  +     LT N  +        N F+     +   
Sbjct: 61  GALIGIEVRGKDFVKEYRDRVFDVFLEGLKQGLTPNPDILCNKEIKFNVFLNEAKSMGAD 120

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
             AT  Y          V +T      D  +         ++  M        PL  L K
Sbjct: 121 MIATGHYAKIAKYKDHFVLDTPKDNTKDQSYFLHALSSEQLSHAMF-------PLGDLTK 173

Query: 178 YETWKLAQ 185
            E  ++A+
Sbjct: 174 KEVREIAR 181


>gi|266620688|ref|ZP_06113623.1| GMP synthase protein [Clostridium hathewayi DSM 13479]
 gi|288867681|gb|EFC99979.1| GMP synthase protein [Clostridium hathewayi DSM 13479]
          Length = 435

 Score = 58.4 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 56/183 (30%), Gaps = 20/183 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +  +     ++  +  ++G   K E E  + V K  ++    +
Sbjct: 141 KKVLLALSGGVDSSVVAALLIKAIGKQLTCVHVNHGLMRKGESESVIDVFKHQLDANLVY 200

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D+           LG ++  +  +     I    +       R +             G
Sbjct: 201 VDAT-------ERFLGKLAGVADPEQKRKIIGAEFIRVFEEEARKL------------EG 241

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           +++      L  +    +  PL  L K E      ++
Sbjct: 242 IEFLAQGTIYPDIVESGTKTAKMVKSHHNVGGLPEDLQFQLVEPLRQLFKDEVRACGVEL 301

Query: 188 GGQ 190
           G  
Sbjct: 302 GLP 304


>gi|157736746|ref|YP_001489429.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Arcobacter butzleri RM4018]
 gi|205810440|sp|A8ES36|MNMA2_ARCB4 RecName: Full=tRNA-specific 2-thiouridylase mnmA 2
 gi|157698600|gb|ABV66760.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Arcobacter butzleri RM4018]
          Length = 367

 Score = 58.4 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 56/188 (29%), Gaps = 14/188 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV----RKKI 60
           + K    ++  SGG DSS        +   V  L     +      +C   +     KK+
Sbjct: 1   MNKNKKIVVGMSGGVDSSVTALLLKQQGYDVVGLFMRNWEYGIKGSQCPNRIEFEDAKKV 60

Query: 61  VELMPKW---KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
             L+      KD + E       +  +     LT N  +        N F+     +   
Sbjct: 61  GALIGIEVRGKDFVKEYRDRVFDVFLEGLKQGLTPNPDILCNKEIKFNVFLNEAKSMGAD 120

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
             AT  Y          V +T      D  +         ++  M        PL  L K
Sbjct: 121 MIATGHYAKIAKYKDHFVLDTPKDNTKDQSYFLHALSSEQLSHAMF-------PLGDLTK 173

Query: 178 YETWKLAQ 185
            E  ++A+
Sbjct: 174 KEVREIAR 181


>gi|315126737|ref|YP_004068740.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudoalteromonas sp. SM9913]
 gi|315015251|gb|ADT68589.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudoalteromonas sp. SM9913]
          Length = 366

 Score = 58.4 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 53/191 (27%), Gaps = 11/191 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M++        ++  SGG DSS        +  +VE L     + +  +  C     + +
Sbjct: 1   MSE--NSHIKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNDEYCA--AAEDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +A            +  + I F  F  
Sbjct: 57  KDAQAVCDKLGIELHTVN--FAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G                              LG E       P+  +
Sbjct: 115 FAAQALGADFIATGHYVRRELRDDKYVMCRGLDDNKDQSYFLYTLGHEHIAQTLFPVGDI 174

Query: 176 KKYETWKLAQD 186
            K E  ++A++
Sbjct: 175 AKPEVRRIAEE 185


>gi|294635307|ref|ZP_06713805.1| thiamine biosynthesis/tRNA modification protein ThiI [Edwardsiella
           tarda ATCC 23685]
 gi|291091316|gb|EFE23877.1| thiamine biosynthesis/tRNA modification protein ThiI [Edwardsiella
           tarda ATCC 23685]
          Length = 482

 Score = 58.4 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 57/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------SAHEI--GVKQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +           V  +I +             + +  A+ +A R GI  
Sbjct: 231 FGSSHRVRFVAI-------DFAPVVGEILEKVDDGQMGVVLKRMMVRAASRVAERYGIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         V  PL+   K    +LA++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDGVSDTL---------VLRPLIAHDKEHIIRLAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|212709181|ref|ZP_03317309.1| hypothetical protein PROVALCAL_00214 [Providencia alcalifaciens DSM
           30120]
 gi|212688093|gb|EEB47621.1| hypothetical protein PROVALCAL_00214 [Providencia alcalifaciens DSM
           30120]
          Length = 483

 Score = 58.4 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVKQIAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHKVRFIAVN-------FEPVVAEILEKIDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I      +         V  PL+   K    KLA+ IG +
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDNASDTL---------VLRPLISHDKEHIIKLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|222529697|ref|YP_002573579.1| tRNA-specific 2-thiouridylase MnmA [Caldicellulosiruptor bescii DSM
           6725]
 gi|222456544|gb|ACM60806.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Caldicellulosiruptor bescii DSM 6725]
          Length = 360

 Score = 58.4 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 45/187 (24%), Gaps = 7/187 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL---ECRLCVRKKIVEL 63
                L+  SGG DSS   +   +    V   +    Q    +    E   C    + + 
Sbjct: 1   MKKKVLVAMSGGVDSSVAAAILKEEGYEVYGATMQIWQTETEDELIREKSCCSLTAVDDA 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      ++  +         +   +  +K +  N              +  A + 
Sbjct: 61  RRVAHILDIPYYVFNMKDDFKKEVINYFVDEYIKGRTPNPCIMCNRKIKFELFLKKAMVL 120

Query: 124 ----YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
                  G   I+              +           N+  E       PL    K E
Sbjct: 121 GMDYIATGHYAIIEYDKSLYRYILKRSKAREKDQTYVLYNMTQEMLSKTIFPLGRFSKDE 180

Query: 180 TWKLAQD 186
             KLA+ 
Sbjct: 181 VRKLAEK 187


>gi|257066418|ref|YP_003152674.1| thiamine biosynthesis/tRNA modification protein ThiI [Anaerococcus
           prevotii DSM 20548]
 gi|256798298|gb|ACV28953.1| thiamine biosynthesis/tRNA modification protein ThiI [Anaerococcus
           prevotii DSM 20548]
          Length = 387

 Score = 58.4 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 19/181 (10%), Positives = 45/181 (24%), Gaps = 25/181 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS         R   +  + F                 +K ++L        G+  +  
Sbjct: 187 IDSPVAGFLMAKRGMNINAIHFH------SYPFTSKRAHQKAMDLAKILSAYTGKMTVYS 240

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
           + +       S                   P R    L     +     I+         
Sbjct: 241 VNLAEIYKAISKN----------------CPRRETTILSRRFMMRIANKISEKYYYQALI 284

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
                        + IE+   +   S + +  PL+ + K +  ++++ I   +      +
Sbjct: 285 TGESL---GQVASQTIESVSVINDSSKLPILRPLIAMDKKDIIEISEKIDSYEKAIEPYD 341

Query: 199 E 199
           +
Sbjct: 342 D 342


>gi|114566016|ref|YP_753170.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
 gi|122318873|sp|Q0AZQ5|MNMA_SYNWW RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|114336951|gb|ABI67799.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
          Length = 338

 Score = 58.4 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 54/189 (28%), Gaps = 22/189 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DS+       ++   V  L+  + +R   E      +  ++         
Sbjct: 2   KVAVLMSGGIDSTVSALLLREQGYEVTGLTMVHLEREAGE--KAARIANEL--------- 50

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E  ++    L +   S++      + +  + PN  V     I        A  LG  
Sbjct: 51  -QIEHKVVD---LREPFQSAVVDYFCREYEQGHTPNPCVKCNEEIKFGLLLKAALDLGAD 106

Query: 130 NIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
            +  G             +                  L  +    +  PL   +K E  +
Sbjct: 107 KVASGHYARIDYDDKSQCYRLMKGVDPRKDQSYFLYRLKQQQLSRLIFPLGGYRKEEVRE 166

Query: 183 LAQDIGGQD 191
           +A+    Q 
Sbjct: 167 MARRYHLQL 175


>gi|167756778|ref|ZP_02428905.1| hypothetical protein CLORAM_02327 [Clostridium ramosum DSM 1402]
 gi|237734496|ref|ZP_04564977.1| tRNA-specific 2-thiouridylase mnmA [Mollicutes bacterium D7]
 gi|167702953|gb|EDS17532.1| hypothetical protein CLORAM_02327 [Clostridium ramosum DSM 1402]
 gi|229382316|gb|EEO32407.1| tRNA-specific 2-thiouridylase mnmA [Coprobacillus sp. D7]
          Length = 377

 Score = 58.4 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 17/195 (8%), Positives = 39/195 (20%), Gaps = 17/195 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-----YGQRNKVELECRLCVR---K 58
            +   +L  SGG DS+       ++   V  +                      +    +
Sbjct: 1   MSKRVVLGLSGGVDSAVAAYLLKEQGYDVIGVFMRNWDSQLNNDILGNPTNDNDICPQEE 60

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
              +     +        +    + +      T  +    +        +     I    
Sbjct: 61  DYNDAKAVAECLGIPIKRVD--FIKEYWDHVFTYFLDEYRKGRTPNPDILC-NKHIKFKA 117

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL--- 175
               A  L    I  G                               +        L   
Sbjct: 118 FLDFAKTLNADYIATGHYAQVKHYQGADSVMLKGLDNNKDQTYFLCQLNQQQLQNSLFPL 177

Query: 176 ---KKYETWKLAQDI 187
               K E  ++A+++
Sbjct: 178 GEIDKTEVRRIAREL 192


>gi|120598593|ref|YP_963167.1| tRNA-specific 2-thiouridylase MnmA [Shewanella sp. W3-18-1]
 gi|166235084|sp|A1RIW8|MNMA_SHESW RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|120558686|gb|ABM24613.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shewanella sp. W3-18-1]
          Length = 372

 Score = 58.4 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 53/192 (27%), Gaps = 10/192 (5%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +        ++  SGG DSS      + +  +VE L     + +     C     + + +
Sbjct: 5   EPTHTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDNNEYCA--AAEDLKD 62

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     + H +      +   +     +A            +  + I F  F    
Sbjct: 63  AQAVCDKLGIKLHTVN--FAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFA 120

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLK 176
              L    I +G                               L  E       P+  L+
Sbjct: 121 DEILDADYIAMGHYVRRRDNSDGSTQMLRGVDGNKDQSYFLYTLSHEQVARSLFPVGELE 180

Query: 177 KYETWKLAQDIG 188
           K++  ++A+++G
Sbjct: 181 KHQVREIAKEMG 192


>gi|30249408|ref|NP_841478.1| argininosuccinate synthase [Nitrosomonas europaea ATCC 19718]
 gi|34921586|sp|Q82UP5|ASSY_NITEU RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|30138771|emb|CAD85348.1| Argininosuccinate synthase [Nitrosomonas europaea ATCC 19718]
          Length = 404

 Score = 58.4 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 63/192 (32%), Gaps = 13/192 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + K   A+L FSGG D+S  L W  D +   V T + D GQ  ++E      V+  I E+
Sbjct: 1   MDKVKKAVLAFSGGLDTSVILKWLQDTYQCEVVTFTADIGQGEEIEPARAKAVQFGIREI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                ++    D++ P+         + T      +   ++    +  R +         
Sbjct: 61  FIEDLREEFVRDYVFPM-------FRANTIYEGEYLLGTSIARPLIAKRQVEIAQQTGAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A   G T         +   Y       + A     +L     +  +     +      +
Sbjct: 114 AVSHGATGKGNDQVRFELGYYALQPDIRVIAPWREWDLTSREKLLTYAEKQGIP----IE 169

Query: 183 LAQDIGGQDLVN 194
           + Q  G    ++
Sbjct: 170 MKQKAGSPYSMD 181


>gi|15966466|ref|NP_386819.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sinorhizobium meliloti 1021]
 gi|24638324|sp|Q92MB5|MNMA_RHIME RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|15075737|emb|CAC47292.1| Putative tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
           [Sinorhizobium meliloti 1021]
          Length = 398

 Score = 58.4 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 51/191 (26%), Gaps = 16/191 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS            V  ++   Y     V      C  + I +     +
Sbjct: 14  RVVVAMSGGVDSSVVAGLLKREGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 73

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++    A        P   V     +        A  LG 
Sbjct: 74  TIGIPHYVLD---YEARFRETVINPFAESYIAGETPIPCVACNQTVKFADLLATAKELGA 130

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM-----------WLKK 177
             +  G         P  R+   RA+    +   +    +                 L K
Sbjct: 131 DALATGHYIRSRPS-PKPRYAGQRALYRPADAERDQSYFLFATTQEQIDYLRFPLGGLPK 189

Query: 178 YETWKLAQDIG 188
            ET  LA+++G
Sbjct: 190 SETRALAEEMG 200


>gi|260174366|ref|ZP_05760778.1| putative GMP synthase (glutamine-hydrolyzing) [Bacteroides sp. D2]
 gi|315922634|ref|ZP_07918874.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313696509|gb|EFS33344.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 434

 Score = 58.4 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 55/183 (30%), Gaps = 21/183 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +  L    + +  +  ++G   K E E        +VE+  + 
Sbjct: 141 KKVLLALSGGVDSSVVAALLLKAIGNNLVCVHVNHGLMRKGESE-------DVVEVFNQL 193

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           K +L    +     L  ++     +     I    +       R +             G
Sbjct: 194 KANLVYVDVTD-RFLNKLAGVEDPEQKRKIIGGEFIRVFEEEARKL------------NG 240

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           +++      L  +    +  PL  L K E      ++
Sbjct: 241 IDFLGQGTIYPDIVESGTKTAKMVKSHHNVGGLPEDLKFQLVEPLRQLFKDEVRACGLEL 300

Query: 188 GGQ 190
           G  
Sbjct: 301 GLP 303


>gi|210615810|ref|ZP_03290791.1| hypothetical protein CLONEX_03009 [Clostridium nexile DSM 1787]
 gi|210150146|gb|EEA81155.1| hypothetical protein CLONEX_03009 [Clostridium nexile DSM 1787]
          Length = 362

 Score = 58.4 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 51/188 (27%), Gaps = 6/188 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ---RNKVELECRLCVRKKIVEL 63
           +    ++  SGG DSS       +    V  ++    Q   R   E     C    + + 
Sbjct: 2   EKKKVVVGMSGGVDSSVAAYLLKEEGYDVIGVTMQIWQDEDRAIQEENGGCCGLTAVDDA 61

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                D     +++        +      +  +  +  N             L+  +   
Sbjct: 62  RRVASDLGIPYYVMNFKKEFKENVIDYFVDEYLNGRTPNPCIACNRYVKWESLLKRSMDI 121

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW---LKKYET 180
               I        E   +G    R     A +    L   +   +   LM      K E 
Sbjct: 122 GADYIATGHYARIEKLPNGRYSLRRSATLAKDQTYALYNLTQEQLKRTLMPVGAYAKEEV 181

Query: 181 WKLAQDIG 188
            ++A+ IG
Sbjct: 182 REIAEKIG 189


>gi|307300497|ref|ZP_07580277.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sinorhizobium meliloti BL225C]
 gi|307318362|ref|ZP_07597797.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sinorhizobium meliloti AK83]
 gi|306896044|gb|EFN26795.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sinorhizobium meliloti AK83]
 gi|306904663|gb|EFN35247.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sinorhizobium meliloti BL225C]
          Length = 398

 Score = 58.4 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 51/191 (26%), Gaps = 16/191 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS            V  ++   Y     V      C  + I +     +
Sbjct: 14  RVVVAMSGGVDSSVVAGLLKREGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 73

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++    A        P   V     +        A  LG 
Sbjct: 74  TIGIPHYVLD---YEARFRETVINPFAESYIAGETPIPCVACNQTVKFADLLATAKELGA 130

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM-----------WLKK 177
             +  G         P  R+   RA+    +   +    +                 L K
Sbjct: 131 DALATGHYIRSRPS-PKPRYAGQRALYRPADAERDQSYFLFATTQEQIDYLRFPLGGLPK 189

Query: 178 YETWKLAQDIG 188
            ET  LA+++G
Sbjct: 190 SETRALAEEMG 200


>gi|254974826|ref|ZP_05271298.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium difficile QCD-66c26]
 gi|255092214|ref|ZP_05321692.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium difficile CIP 107932]
 gi|255100299|ref|ZP_05329276.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium difficile QCD-63q42]
 gi|255306238|ref|ZP_05350410.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium difficile ATCC 43255]
 gi|255313953|ref|ZP_05355536.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium difficile QCD-76w55]
 gi|255516633|ref|ZP_05384309.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium difficile QCD-97b34]
 gi|255649732|ref|ZP_05396634.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium difficile QCD-37x79]
 gi|260682888|ref|YP_003214173.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium difficile CD196]
 gi|260686486|ref|YP_003217619.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium difficile R20291]
 gi|260209051|emb|CBA62172.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium difficile CD196]
 gi|260212502|emb|CBE03431.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium difficile R20291]
          Length = 359

 Score = 58.4 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 20/147 (13%), Positives = 42/147 (28%), Gaps = 2/147 (1%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS        +   V  ++    Q + V      C     VE   +
Sbjct: 1   MNKKVMIGMSGGVDSSVAAYLLKQQGYDVIGVTMKLWQDDDVVEIEGGCCSLSAVEDARR 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             + +G    +      ++    +      +  +   PN  +     I        A ++
Sbjct: 61  VANKIGIPFYV--LNFREVFKEKVIDYFIDEYLEGKTPNPCIACNKHIKFDDFYKKARQI 118

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRA 153
           G   +  G            R+   ++
Sbjct: 119 GCDYVATGHYAKIEKDESTGRYLLKKS 145


>gi|148263558|ref|YP_001230264.1| tRNA-specific 2-thiouridylase MnmA [Geobacter uraniireducens Rf4]
 gi|205816712|sp|A5GE36|MNMA_GEOUR RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|146397058|gb|ABQ25691.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Geobacter uraniireducens Rf4]
          Length = 375

 Score = 58.4 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 49/194 (25%), Gaps = 14/194 (7%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVR--KKI 60
            K    ++  SGG DSS   +   +    V  +S    DY +    E E          I
Sbjct: 5   NKRKRVVIAMSGGVDSSVAAALLKEEGHEVIGISMQVWDYTRFTAEEGEKFDTCCSLDDI 64

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +     +      +++      +   + +  +   +      PN  V     I      
Sbjct: 65  HDARRVAEQLEIPFYVVN---FEEEFQNLVIDDFVNEYLLGRTPNPCVRCNQWIKFELLL 121

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDT------IRAIETAINLGMESHVTVHTPLMW 174
             A  LG   I  G                               L  E       PL  
Sbjct: 122 KKARGLGADMIATGHYARTEQDADGRYRLMKGVDPAKDQSYFLFTLTQEQLAMTLFPLGG 181

Query: 175 LKKYETWKLAQDIG 188
           + K E   LA   G
Sbjct: 182 MTKQEVRALAAGYG 195


>gi|145298399|ref|YP_001141240.1| tRNA-specific 2-thiouridylase MnmA [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|166234842|sp|A4SKS0|MNMA_AERS4 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|142851171|gb|ABO89492.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 368

 Score = 58.4 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 51/183 (27%), Gaps = 9/183 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS        +  +VE L     + +  +  C     + + +       
Sbjct: 8   KVIVGMSGGVDSSVSAYLLQQQGYQVEGLFMKNWEEDDTDEYCS--ASQDLADAKAVCDK 65

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              + H +      +   +     +             +  + I F  F    A  LG T
Sbjct: 66  LGMKLHTIN--FAAEYWDNVFEHFLEEYKAGRTPNPDILCNKEIKFKAFLEFAAEELGAT 123

Query: 130 NIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            I  G            R                 L  +       P+  L+K E  ++A
Sbjct: 124 YIATGHYVRRDDSTGHPRLLRGLDSNKDQSYFLYTLSEKQVGQSLFPVGDLEKPEVRRIA 183

Query: 185 QDI 187
           + +
Sbjct: 184 EQL 186


>gi|89895170|ref|YP_518657.1| hypothetical protein DSY2424 [Desulfitobacterium hafniense Y51]
 gi|122482441|sp|Q24US9|MNMA_DESHY RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|89334618|dbj|BAE84213.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 370

 Score = 58.4 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 51/202 (25%), Gaps = 16/202 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL---SFDYGQRNKVELECRLCVRKKIV 61
           + +    ++  SGG DSS   +   +    V  +   +   G  + V   C +       
Sbjct: 3   LTEKKKVVVGMSGGVDSSMAAALLKEEGYEVIGITLQTMPSGGPDDVGGCCSITAIDDAR 62

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
            +  +        ++L    + D +      N  +  +  N                   
Sbjct: 63  RVAHQLG---IPHYVLNFRTIFDENVIDYFTNAYLSGETPNPCTMCNRVVRWGEF---LR 116

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCR-------HDTIRAIETAINLGMESHVTVHTPLMW 174
            A  LG   +  G            R                  NL  +       PL  
Sbjct: 117 KARALGADYLATGHYAKVLQDPQSGRCFLSRPTDTWKDQTYMLYNLTQDQLKHTLFPLAD 176

Query: 175 LKKYETWKLAQDIGGQDLVNLI 196
            KK    ++A + G   +    
Sbjct: 177 YKKEHIREMAAERGLLRVSRKP 198


>gi|53711506|ref|YP_097498.1| tRNA-specific 2-thiouridylase MnmA [Bacteroides fragilis YCH46]
 gi|81383903|sp|Q64ZW2|MNMA1_BACFR RecName: Full=tRNA-specific 2-thiouridylase mnmA 1
 gi|52214371|dbj|BAD46964.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Bacteroides fragilis YCH46]
          Length = 364

 Score = 58.4 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 49/187 (26%), Gaps = 10/187 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVEL-ECRLCVRKKIV 61
           +++K    LL  SGG DSS      L+    V  ++F  Y      E  E    +  ++ 
Sbjct: 1   MMEKNKRVLLGMSGGTDSSVAAMLLLEAGYEVTGVTFRFYEFNGSTEYLEDARALAARLG 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                +         + +    D   S  T        +           + + + + AT
Sbjct: 61  IGHITYDARKVFQEQI-IDYFIDEYMSGHTPVPCTLCNNQLKWPLLAKIADEMGIFYLAT 119

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
             Y                    D         +  +         +  P+  + K E  
Sbjct: 120 GHYVRKQWVDGNYYIAPAEDVDKDQSFFLWGLRQEILQ-------RMLLPMGGMTKSEAR 172

Query: 182 KLAQDIG 188
             A   G
Sbjct: 173 AYAAGRG 179


>gi|254419496|ref|ZP_05033220.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Brevundimonas sp. BAL3]
 gi|196185673|gb|EDX80649.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Brevundimonas sp. BAL3]
          Length = 400

 Score = 58.4 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 24/183 (13%), Positives = 55/183 (30%), Gaps = 5/183 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +        V  ++   Y     ++ +   C  + I +     +
Sbjct: 36  RVVAAMSGGVDSTVVAALLHKAGYDVVGVTLQLYDHGAALKKKGACCAGQDIHDARLAAE 95

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYR 125
                 ++L        +      +  +K Q        N  V  R+++ +      A  
Sbjct: 96  MIGIPHYVLDYESRFKDAVIDQFADSYLKGQTPVPCIRCNQTVKFRDLLDVARDLG-AEA 154

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +   + V      + S        +            +    +  PL  L+K +   +A 
Sbjct: 155 MATGHYVRRAAVGNRSQMRKAIDHSRDQSYFLFATTQDQLDYLRFPLADLEKPQVRGVAA 214

Query: 186 DIG 188
           ++G
Sbjct: 215 ELG 217


>gi|319426629|gb|ADV54703.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shewanella putrefaciens 200]
          Length = 372

 Score = 58.4 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 53/192 (27%), Gaps = 10/192 (5%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +        ++  SGG DSS      + +  +VE L     + +     C     + + +
Sbjct: 5   EPTHTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDNNEYCA--AAEDLKD 62

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     + H +      +   +     +A            +  + I F  F    
Sbjct: 63  AQAVCDKLGIKLHTVN--FAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFA 120

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLK 176
              L    I +G                               L  E       P+  L+
Sbjct: 121 DEILDADYIAMGHYVRRRDNSDGSTQMLRGVDGNKDQSYFLYTLSHEQVARSLFPVGELE 180

Query: 177 KYETWKLAQDIG 188
           K++  ++A+++G
Sbjct: 181 KHQVREIAKEMG 192


>gi|295096797|emb|CBK85887.1| [ThiS-adenylate] sulfurtransferase [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 482

 Score = 58.4 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISHDKEHIIDLARKIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|227872028|ref|ZP_03990409.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Oribacterium sinus F0268]
 gi|227842120|gb|EEJ52369.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Oribacterium sinus F0268]
          Length = 362

 Score = 58.4 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 49/190 (25%), Gaps = 13/190 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR--KKIVELMPK 66
             AL+  SGG DSS   +   ++      ++         +          + + +    
Sbjct: 2   EKALIAMSGGVDSSVAAALMQEKGYDCIGITMKLYDSETGQACRSRTCCTLEDVEDARQV 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   ++L      D     +        ++   PN  +     +        A  L
Sbjct: 62  ASTLSMPFYVLN---FKDDFQKKVILPFVETYENGGTPNPCIRCNRFMKHDKLYQRAEEL 118

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL--------KKY 178
             + IV G            R+   +A +   +     +      L            K 
Sbjct: 119 SCSYIVTGHYARIEKDESSGRYLLKKAKDEKKDQSYVLYFLSQEQLAHTLFPLGEYSSKE 178

Query: 179 ETWKLAQDIG 188
           E  ++A   G
Sbjct: 179 EVREIADKYG 188


>gi|261341015|ref|ZP_05968873.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterobacter
           cancerogenus ATCC 35316]
 gi|288316880|gb|EFC55818.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterobacter
           cancerogenus ATCC 35316]
          Length = 482

 Score = 58.4 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 57/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           ++ G      S         I  +   +         +  PL+   K     LA++IG +
Sbjct: 284 LITGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISHDKEHIIDLAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|308185893|ref|YP_003930024.1| Thiamine biosynthesis protein thiI [Pantoea vagans C9-1]
 gi|308056403|gb|ADO08575.1| Thiamine biosynthesis protein thiI [Pantoea vagans C9-1]
          Length = 482

 Score = 58.4 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 58/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       L R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLLRRGSRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+T+A R G+  
Sbjct: 231 FGRSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASTVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K    ++A++IG +
Sbjct: 284 LVTGEAVGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIIRVAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|253564435|ref|ZP_04841892.1| tRNA-specific 2-thiouridylase mnmA 1 [Bacteroides sp. 3_2_5]
 gi|251948211|gb|EES88493.1| tRNA-specific 2-thiouridylase mnmA 1 [Bacteroides sp. 3_2_5]
 gi|301161234|emb|CBW20772.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides fragilis 638R]
          Length = 364

 Score = 58.4 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 49/187 (26%), Gaps = 10/187 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVEL-ECRLCVRKKIV 61
           +++K    LL  SGG DSS      L+    V  ++F  Y      E  E    +  ++ 
Sbjct: 1   MMEKNKRVLLGMSGGTDSSVAAMLLLEAGYEVTGVTFRFYEFNGSTEYLEDARALAARLG 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                +         + +    D   S  T        +           + + + + AT
Sbjct: 61  IGHITYDARKVFQEQI-IDYFIDEYMSGHTPVPCTLCNNQLKWPLLAKIADEMGIFYLAT 119

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
             Y                    D         +  +         +  P+  + K E  
Sbjct: 120 GHYVRKQWVDGNYYIAPAEDVDKDQSFFLWGLKQEILQ-------RMLLPMGGMTKSEAR 172

Query: 182 KLAQDIG 188
             A   G
Sbjct: 173 AYAAGRG 179


>gi|226940740|ref|YP_002795814.1| tRNA-specific 2-thiouridylase MnmA [Laribacter hongkongensis HLHK9]
 gi|226715667|gb|ACO74805.1| TrmU [Laribacter hongkongensis HLHK9]
          Length = 359

 Score = 58.4 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 52/193 (26%), Gaps = 10/193 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +K    ++  SGG DSS        +   V  +     Q  + + +   C  K+    
Sbjct: 1   MTEKKKRIVVGLSGGVDSSVTAYLLKQQGHEVIGVFM---QNWEDDNDSEYCSIKQDSLD 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                D LG D  +            + +    +      PN  V     I        A
Sbjct: 58  AMSVADLLGIDMEIV--NFAREYKERVFQYFLDEYSAGRTPNPDVLCNAEIKFKAFLDYA 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            +LG   I  G                              L          PL  L K 
Sbjct: 116 MQLGADCIATGHYARKLERDGRHYLLKGVDPGKDQSYFLYRLVPAQLEKALFPLGDLHKT 175

Query: 179 ETWKLAQDIGGQD 191
           E  ++A +IG  +
Sbjct: 176 EVRRIAGEIGLPN 188


>gi|88858568|ref|ZP_01133210.1| thiamine biosynthesis protein ThiI [Pseudoalteromonas tunicata D2]
 gi|88820185|gb|EAR29998.1| thiamine biosynthesis protein ThiI [Pseudoalteromonas tunicata D2]
          Length = 485

 Score = 58.4 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 55/187 (29%), Gaps = 25/187 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      L L SGG DS       + +  R   L F+ G            +  K     
Sbjct: 177 LPTQEDVLSLMSGGFDSGVATYQMIRKGARTHFLFFNLGG-------AAHEIGVKQASYF 229

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             W        +           S   + V  +I +N   +        + +   + +A 
Sbjct: 230 -LWDKYSSTHKV--------KFISVDFEPVVAEILENVENSQMGVVLKRMMMRAGSLVAK 280

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           + GI  +V G      S       + I  +   +         +  PL+   K E   +A
Sbjct: 281 QFGIDALVTGESLGQVSSQTLANLNVIDQVTDTL---------ILRPLIQYDKQEIINIA 331

Query: 185 QDIGGQD 191
           + IG  +
Sbjct: 332 RQIGTSE 338


>gi|127512489|ref|YP_001093686.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shewanella loihica PV-4]
 gi|166235081|sp|A3QD79|MNMA_SHELP RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|126637784|gb|ABO23427.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shewanella loihica PV-4]
          Length = 371

 Score = 58.4 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 56/185 (30%), Gaps = 9/185 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS      + +  +VE L     + +  +  C     + + +      
Sbjct: 11  KKVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDTDEYCA--AAEDLKDAQAVCD 68

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQD-----NNLPNTFVPGRNIIFLVFAATLA 123
               + H +      +   +     +A          + + N  +  +  +        A
Sbjct: 69  KLGIKLHTVN--FAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFADDILDA 126

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             + + + V     +  S                  L  E       P+  L+K E  ++
Sbjct: 127 DYIAMGHYVRRSDASGQSQMLRGVDGNKDQSYFLYTLSHEQIARSLFPVGELEKSEVREI 186

Query: 184 AQDIG 188
           A+++G
Sbjct: 187 AKEMG 191


>gi|146293329|ref|YP_001183753.1| tRNA-specific 2-thiouridylase MnmA [Shewanella putrefaciens CN-32]
 gi|166235082|sp|A4Y7M1|MNMA_SHEPC RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|145565019|gb|ABP75954.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shewanella putrefaciens CN-32]
          Length = 372

 Score = 58.4 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 53/192 (27%), Gaps = 10/192 (5%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +        ++  SGG DSS      + +  +VE L     + +     C     + + +
Sbjct: 5   EPTHTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDNNEYCA--AAEDLKD 62

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     + H +      +   +     +A            +  + I F  F    
Sbjct: 63  AQAVCDKLGIKLHTVN--FAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFA 120

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLK 176
              L    I +G                               L  E       P+  L+
Sbjct: 121 DEILDADYIAMGHYVRRRDNSDGSTQMLRGVDGNKDQSYFLYTLSHEQVARSLFPVGELE 180

Query: 177 KYETWKLAQDIG 188
           K++  ++A+++G
Sbjct: 181 KHQVREIAKEMG 192


>gi|302879502|ref|YP_003848066.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Gallionella capsiferriformans ES-2]
 gi|302582291|gb|ADL56302.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Gallionella capsiferriformans ES-2]
          Length = 366

 Score = 58.4 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 46/197 (23%), Gaps = 10/197 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K    ++  SGG DSS        +   V  L     + +     C         +L+
Sbjct: 1   MNKNKRVVVGMSGGVDSSVTALLLKQQGYDVIGLFMKNWEDDDNSEYCSSRQ-----DLL 55

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                +      +            +      + Q    PN  +     I        A 
Sbjct: 56  DAVSVADTIGIPIEAVNFAKEYKDRVFSAFLREYQSGRTPNPDILCNAEIKFKAFLDHAI 115

Query: 125 RLGITNIVIGVCETDYSGYP-----DCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            LG   I  G                    +         L          PL  L K E
Sbjct: 116 ELGADTIATGHYAQVREVDGLFQLLKATDASKDQSYFLHRLNQAQLSRAMFPLGRLLKSE 175

Query: 180 TWKLAQDIGGQDLVNLI 196
             K+A+  G  +     
Sbjct: 176 IRKIAEQHGLCNFAKKD 192


>gi|157803967|ref|YP_001492516.1| tRNA-specific 2-thiouridylase MnmA [Rickettsia canadensis str.
           McKiel]
 gi|166235078|sp|A8EZE8|MNMA_RICCK RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|157785230|gb|ABV73731.1| hypothetical protein A1E_04020 [Rickettsia canadensis str. McKiel]
          Length = 368

 Score = 58.4 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 54/194 (27%), Gaps = 9/194 (4%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKK 59
           M ++  K    ++  SGG DS+   +    +   V  ++   Y     V  +   C  + 
Sbjct: 1   MINLGDKQSIIVVAMSGGVDSAAVAAMLHAQGYNVIGITLQLYDHGMAVGKKNACCAGQD 60

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           I +            ++L           S+ +N          P   V     +     
Sbjct: 61  IYDAKMVANKLGIPHYVLD---YESKFKESVIENFVDSYLQGETPLPCVQCNKSVKFKDL 117

Query: 120 ATLAYRLGITNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
              A  LG   +     V  +   + +                     E    +  PL W
Sbjct: 118 IKTAKELGAAQLATGHYVRKINGDNGAELHIGIDPAKDQSYFLFTTTKEQLDYLSFPLGW 177

Query: 175 LKKYETWKLAQDIG 188
             K ET KLA   G
Sbjct: 178 FTKDETRKLASKFG 191


>gi|310780562|ref|YP_003968894.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ilyobacter polytropus DSM 2926]
 gi|309749885|gb|ADO84546.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ilyobacter polytropus DSM 2926]
          Length = 376

 Score = 58.0 bits (138), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 54/179 (30%), Gaps = 8/179 (4%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDY--GQRNKVELECRLCVR--KKIVELMPKWKDS 70
            SGG DSST       +   V  ++  +  G     E            I +      D 
Sbjct: 27  MSGGVDSSTVAYMLKKQGYNVIGITMKHWSGMDELSEDSNSKTCCSLDDIYDAKRVCDDL 86

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
               +++    L +     +      + +    PN  +     I L        ++G   
Sbjct: 87  DIPHYVIN---LKEPFKEKVVDYFIEEYEKGRTPNPCMVCNRYIKLGKLLEYGIKMGADF 143

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM-WLKKYETWKLAQDIG 188
           +  G      +G      D  +     ++     ++      +  L+K +  K+A+ +G
Sbjct: 144 VATGHYAKIKNGNLYMGDDPKKDQVYFLSQVKRENLKYLMFPVGDLEKPQVRKIAEYLG 202


>gi|309388972|gb|ADO76852.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Halanaerobium praevalens DSM 2228]
          Length = 360

 Score = 58.0 bits (138), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 44/187 (23%), Gaps = 10/187 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVE--TLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              ++  SGG DSS   +   +    V   T+          + E   C    + +    
Sbjct: 2   KKVMIAMSGGVDSSVAAALLKEEGYEVIGGTMHIFPDYEEATDREDHCCSYSAVRDAKRV 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +       +  L             +     +  N     V     I        A  +
Sbjct: 62  AQKLEIPHFVFNLREEFQEKVIDYFVDEYSLGRTPNPC---VMCNKEIKFAALHKKAIEI 118

Query: 127 GITNIVIGVCETD-----YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           G   I  G                   +          L  E       PL    K E  
Sbjct: 119 GCDYIASGHYAKIEKENGRYILKKGLDENKDQSYMLYVLNQEQLSQTLFPLSEYTKSEIR 178

Query: 182 KLAQDIG 188
           + A+++G
Sbjct: 179 EKAKNLG 185


>gi|255655293|ref|ZP_05400702.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium difficile QCD-23m63]
          Length = 359

 Score = 58.0 bits (138), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 20/148 (13%), Positives = 43/148 (29%), Gaps = 4/148 (2%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-RNKVELECRLCVRKKIVELMP 65
                ++  SGG DSS        +   V  ++    Q  + VE+E   C    + +   
Sbjct: 1   MNKKVMIGMSGGVDSSVAAYLLKQQGYDVIGVTMKLWQDDDDVEIEGGCCSLSAVEDARR 60

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    ++L      ++    +      +  +   PN  +     I        A +
Sbjct: 61  VANKIGIPFYVLN---FREVFKEKVIDYFIDEYLEGKTPNPCIACNKHIKFDDFYKKARQ 117

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRA 153
           +G   +  G            R+   ++
Sbjct: 118 IGCDYVATGHYAKIEKDESTGRYLLKKS 145


>gi|330940535|gb|EGH43609.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 484

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 56/183 (30%), Gaps = 29/183 (15%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWKD 69
           L+L SGG DS+      + R        F+ G R      +E    + KK          
Sbjct: 183 LVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAHELGVMEVAHFIWKKYGSSQRVLFV 242

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           S+  + +L   +                       +        + L  A+ +A RL I 
Sbjct: 243 SVPFEEVLEEIL------------------QKVDNSHMGVVLKRMMLRAASAVADRLEID 284

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G   +  +         I A    +         V  PL+   K +   LA +IG 
Sbjct: 285 VLVTGEAISQVASQTLPNLSLIDAATDKL---------VLRPLVATHKQDIVDLATEIGT 335

Query: 190 QDL 192
            D 
Sbjct: 336 ADF 338


>gi|24374174|ref|NP_718217.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shewanella oneidensis MR-1]
 gi|30173411|sp|Q8CX40|MNMA_SHEON RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|24348681|gb|AAN55661.1|AE015704_12 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shewanella oneidensis MR-1]
          Length = 372

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 53/192 (27%), Gaps = 10/192 (5%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +        ++  SGG DSS      + +  +VE L     + +  +  C     + + +
Sbjct: 5   EPTHTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDNDEYCA--AAEDLKD 62

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     + H +      +   +     +A            +  + I F  F    
Sbjct: 63  AQAVCDKLGIKLHTVN--FAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFA 120

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLK 176
              L    I +G                               L  E       P+  L+
Sbjct: 121 DDILDADYIAMGHYVRRRDNEDGTTQMLRGVDNNKDQSYFLYTLSHEQVARSLFPVGELE 180

Query: 177 KYETWKLAQDIG 188
           K+E  ++A+ +G
Sbjct: 181 KHEVREIAKQMG 192


>gi|242398445|ref|YP_002993869.1| ATPase, PP-loop superfamily [Thermococcus sibiricus MM 739]
 gi|242264838|gb|ACS89520.1| ATPase, PP-loop superfamily [Thermococcus sibiricus MM 739]
          Length = 302

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 55/194 (28%), Gaps = 15/194 (7%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
             ++K +   L++ SGG+DS+            VE L  + G       E      KK  
Sbjct: 41  YKLLKASEKVLVVISGGKDSAVTAYVLKKLGYDVECLHINLGI--GGYSEKSEEYAKKQC 98

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           ELM          +++ +  L       +                               
Sbjct: 99  ELM------GVPLYVVRVRELLGAGIGEVRTRRPACSYCGLTKRYIFNKFAYDNGFGVIA 152

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
             + L      I     +++           A +  +  G  + V    PL  L + E  
Sbjct: 153 TGHNLDDEASFIFSNLMNWNTE-------YLAKQGPVLPGEGTFVKKIKPLYGLTEREVV 205

Query: 182 KLAQDIGGQDLVNL 195
             A  +G + ++N 
Sbjct: 206 AYALAVGLEYIINE 219


>gi|205822083|sp|Q2ISK2|MNMA_RHOP2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 398

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 50/186 (26%), Gaps = 10/186 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +    +   V  ++   Y        +   C  + I +     +
Sbjct: 15  RVVVAMSGGVDSSATAALLKSQGYDVVGITLQLYDHGAATHRKGACCAGQDIHDARDVAE 74

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           S+  + A        P   +     +        A  LG 
Sbjct: 75  RIGIPHYVLD---YESRFRESVIDSFADSYALGETPVPCIECNRSVKFRDLLATARELGA 131

Query: 129 TNIVIGVCETDYSGYPDCR------HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           + +  G   +        R                     E    +  PL  + K +T  
Sbjct: 132 SALATGHYVSSRRLADGSRALICAADRDRDQSYFLFATTREQLDFLRFPLGDMTKPQTRD 191

Query: 183 LAQDIG 188
           LA+  G
Sbjct: 192 LARQFG 197


>gi|320101712|ref|YP_004177303.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Isosphaera pallida ATCC 43644]
 gi|319748994|gb|ADV60754.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Isosphaera pallida ATCC 43644]
          Length = 401

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 50/196 (25%), Gaps = 8/196 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             P  +L  SGG DSS       ++   V  L    G               +   L  +
Sbjct: 2   NRPRVVLAMSGGVDSSVAAGLLKNQGYDVVGLFMRTGVHFDDPTRRAKTCCSQFDALDAQ 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 +     L    +     + ++   +      PN  V     +          ++
Sbjct: 62  AVADRLDIPFHALDF--EADFGRIMEDFTEEYLRGRTPNPCVMCNIWLKFGKLWAYGKKV 119

Query: 127 GITNIVIGVCET---DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM---WLKKYET 180
           G   +  G       D SG P       RA + +  L       +   L+      K E 
Sbjct: 120 GADFVATGHYARVVQDESGRPRIARGVDRAKDQSYVLSGVRREILQRMLLPVGGFTKEEI 179

Query: 181 WKLAQDIGGQDLVNLI 196
              A+D          
Sbjct: 180 RAKARDWNLPVHSKAD 195


>gi|242398043|ref|YP_002993467.1| GMP synthase [glutamine-hydrolyzing] subunit B [Thermococcus
           sibiricus MM 739]
 gi|242264436|gb|ACS89118.1| GMP synthase [glutamine-hydrolyzing] subunit B [Thermococcus
           sibiricus MM 739]
          Length = 313

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 59/187 (31%), Gaps = 25/187 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              A++  SGG DSST    A     DR+  +  + G   K E E    V K   E    
Sbjct: 25  EKKAIIALSGGVDSSTAAILAYKAIGDRLHAVFVNTGFLRKGEPEF---VIKTFKEEFGL 81

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +          L  ++     + +  K                 F+     +A  +
Sbjct: 82  NLIYVDAQERF-FTALKGVTDPEEKRKIIGKT----------------FIDVFEEVANEI 124

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               ++        +         I++      L    ++ +  PL  L K E  ++A++
Sbjct: 125 DADFLIQ----GTIAPDWIESQGKIKSHHNVGGLPERLNLKLIEPLRDLYKDEVREVAKE 180

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 181 LGLPEKI 187


>gi|325285134|ref|YP_004260924.1| tRNA-specific 2-thiouridylase mnmA [Cellulophaga lytica DSM 7489]
 gi|324320588|gb|ADY28053.1| tRNA-specific 2-thiouridylase mnmA [Cellulophaga lytica DSM 7489]
          Length = 396

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 40/144 (27%), Gaps = 3/144 (2%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS       ++   V  L       + V +       +   + +   +
Sbjct: 2   KKVVVGLSGGVDSSVTAYLLKEQGYDVIGLFMKNWHDDSVTISNECPWLEDSNDALIVAE 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   +    L       +   +  + +    PN  V     I       +A +LG 
Sbjct: 62  KLGIPFQTVD---LSAEYKERIVDYMFNEYEKGRTPNPDVLCNREIKFDVFMKIAMQLGA 118

Query: 129 TNIVIGVCETDYSGYPDCRHDTIR 152
             +  G      S   +   +  +
Sbjct: 119 DYVATGHYCRKTSFINEEGKEIHQ 142


>gi|283784242|ref|YP_003364107.1| thiamine biosynthesis protein ThiI [Citrobacter rodentium ICC168]
 gi|282947696|emb|CBG87251.1| thiamine biosynthesis protein ThiI [Citrobacter rodentium ICC168]
          Length = 482

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 57/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 YGSSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     +A++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINIAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|17228854|ref|NP_485402.1| tRNA-specific 2-thiouridylase MnmA [Nostoc sp. PCC 7120]
 gi|24638319|sp|Q8YX56|MNMA_ANASP RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|17130706|dbj|BAB73316.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Nostoc sp. PCC 7120]
          Length = 352

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 57/187 (30%), Gaps = 15/187 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSST  +   ++   V  L+        +      C  + +++     +
Sbjct: 2   KKVVVGLSGGVDSSTAAAILHNQGYEVIGLTL------WLMKGKGQCCSEGMIDAAYICE 55

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                  ++ +  +                      +          +V  A+   +LG 
Sbjct: 56  QLGIPHEVVDMRDVFQTHIVDYLVTGYGAGITPLPCSQCNKTVKFGPMVQYAS--EKLGC 113

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH-------TPLMWLKKYETW 181
             I  G            R+  +RA++   +     +            PL  ++K +T 
Sbjct: 114 DRIATGHYARIRYDEATGRYQLLRAVDRNKDQSYFLYDLSQDLLAASLFPLGEMEKADTR 173

Query: 182 KLAQDIG 188
           ++A + G
Sbjct: 174 RIATEHG 180


>gi|218682213|ref|ZP_03529814.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhizobium etli CIAT 894]
          Length = 294

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 48/190 (25%), Gaps = 14/190 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS        +   V  ++   Y     V      C  + I +     +
Sbjct: 14  RVVVAMSGGVDSSVVAGLLKQQGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 73

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++    A        P   V     +        A  LG 
Sbjct: 74  TLGIPHYVLD---YEKRFRETVINPFAESYVAGETPIPCVSCNQTVKFADLLATAKELGA 130

Query: 129 TNIVIGVCETDYSGY----------PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             +  G                                      E    +  PL  L K 
Sbjct: 131 DALATGHYIRSRPNPLADKPGRRALFRPADADRDQSYFLFATTQEQIDYLRFPLGGLPKA 190

Query: 179 ETWKLAQDIG 188
           ET +LA+++G
Sbjct: 191 ETRRLAEEMG 200


>gi|238650755|ref|YP_002916609.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rickettsia peacockii str. Rustic]
 gi|259495838|sp|C4K1W0|MNMA_RICPU RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|238624853|gb|ACR47559.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rickettsia peacockii str. Rustic]
          Length = 365

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 55/194 (28%), Gaps = 9/194 (4%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKK 59
           M ++  K  + ++  SGG DSS   +   ++   V  ++   Y     V  +   C  + 
Sbjct: 1   MINLGDKQSTIVVAMSGGVDSSAVAAMLHEQGHNVIGITLQLYDHGMAVGKKNSCCAGQD 60

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           I +            ++L           S+  N          P   V     +     
Sbjct: 61  IYDAKMVANKLGIPHYVLD---YESKFKESVIDNFVDSYLQGETPLPCVQCNKSVKFRDL 117

Query: 120 ATLAYRLGITNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
              A  LG   +     V  +   + +                     E    +  PL  
Sbjct: 118 IKTARELGADKLATGHYVRKINGDNGAELHTGLDPAKDQSYFLFMTTKEQLEYLRFPLGG 177

Query: 175 LKKYETWKLAQDIG 188
           L K ET KLA   G
Sbjct: 178 LTKGETRKLASKFG 191


>gi|60679769|ref|YP_209913.1| tRNA-specific 2-thiouridylase MnmA [Bacteroides fragilis NCTC 9343]
 gi|81317158|sp|Q5LIS5|MNMA1_BACFN RecName: Full=tRNA-specific 2-thiouridylase mnmA 1
 gi|60491203|emb|CAH05951.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides fragilis NCTC 9343]
          Length = 364

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 49/187 (26%), Gaps = 10/187 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVEL-ECRLCVRKKIV 61
           +++K    LL  SGG DSS      L+    V  ++F  Y      E  E    +  ++ 
Sbjct: 1   MMEKNKRVLLGMSGGTDSSVAAMLLLEAGYEVTGVTFRFYEFNGSTEYLEDARALAARLG 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                +         + +    D   S  T        +           + + + + AT
Sbjct: 61  IGHITYDARKVFQEQI-IDYFIDEYMSGHTPVPCTLCNNQLKWPLLAKIADEMGIFYLAT 119

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
             Y                    D         +  +         +  P+  + K E  
Sbjct: 120 GHYVRKQWIDGNYYIAPAEDVDKDQSFFLWGLRQEILQ-------RMLLPMGGMTKSEAR 172

Query: 182 KLAQDIG 188
             A   G
Sbjct: 173 AYAAGRG 179


>gi|291320347|ref|YP_003515609.1| tRNA(5 methylaminomethyl 2 thiouridylate) methyltransferase
           [Mycoplasma agalactiae]
 gi|290752680|emb|CBH40653.1| TRNA(5 methylaminomethyl 2 thiouridylate) methyltransferase
           [Mycoplasma agalactiae]
          Length = 374

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 48/191 (25%), Gaps = 11/191 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-----YGQRNKVELECRLCVR-- 57
           +      +L  SGG DSS C    L +   VE L                      +   
Sbjct: 1   MFNKKKVILGMSGGVDSSVCAYLLLKQGFEVEGLFMRNWDSMLNNDFLGNENISQDICPQ 60

Query: 58  -KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
            +   + +        + H +    + +  +      ++            +  + I F 
Sbjct: 61  EQDYQDALKVANKLGIKLHRVD--FVNEYWNDVFKTFISEYEHGRTPNPDILCNKYIKFK 118

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHD-TIRAIETAINLGMESHVTVHTPLMWL 175
            F+      LG   I +G       G      D           L  E    V  PL   
Sbjct: 119 AFSDYAFNNLGADYIAMGHYARVTDGRLYRAKDLNKDQTYFLAQLSHEQLEKVLMPLADF 178

Query: 176 KKYETWKLAQD 186
              E  +   +
Sbjct: 179 TSKEEVRKIAE 189


>gi|91793184|ref|YP_562835.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shewanella denitrificans OS217]
 gi|91715186|gb|ABE55112.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shewanella denitrificans OS217]
          Length = 377

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 52/196 (26%), Gaps = 12/196 (6%)

Query: 1   MNDI--IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           M  I  I      ++  SGG DSS      + +   VE L     + +  +  C      
Sbjct: 6   MTSIKPIHNGKKVIVGMSGGVDSSVSAYLLMQQGYEVEGLFMKNWEEDDTDEYCA--AAD 63

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
            + +          + H +      +   +     +A            +  + I F  F
Sbjct: 64  DLKDAQAVCDKLGIKMHTVN--FAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAF 121

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPL 172
                  L    I +G                               L  E       P+
Sbjct: 122 LEFADDILDADYIAMGHYVRRRDNSDGSVQMLRGVDGNKDQSYFLYTLSHEQVARSLFPV 181

Query: 173 MWLKKYETWKLAQDIG 188
             L+K+E   +A+ +G
Sbjct: 182 GELEKHEVRDIAKQMG 197


>gi|205822016|sp|Q12N64|MNMA_SHEDO RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 372

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 52/196 (26%), Gaps = 12/196 (6%)

Query: 1   MNDI--IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           M  I  I      ++  SGG DSS      + +   VE L     + +  +  C      
Sbjct: 1   MTSIKPIHNGKKVIVGMSGGVDSSVSAYLLMQQGYEVEGLFMKNWEEDDTDEYCA--AAD 58

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
            + +          + H +      +   +     +A            +  + I F  F
Sbjct: 59  DLKDAQAVCDKLGIKMHTVN--FAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAF 116

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPL 172
                  L    I +G                               L  E       P+
Sbjct: 117 LEFADDILDADYIAMGHYVRRRDNSDGSVQMLRGVDGNKDQSYFLYTLSHEQVARSLFPV 176

Query: 173 MWLKKYETWKLAQDIG 188
             L+K+E   +A+ +G
Sbjct: 177 GELEKHEVRDIAKQMG 192


>gi|94499692|ref|ZP_01306229.1| thiamine biosynthesis protein ThiI [Oceanobacter sp. RED65]
 gi|94428446|gb|EAT13419.1| thiamine biosynthesis protein ThiI [Oceanobacter sp. RED65]
          Length = 483

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 25/185 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             S L L SGG DS+      + R  +   L F+ G            +   + ++    
Sbjct: 177 QDSVLSLVSGGFDSNVASYLMMRRGMQTHYLFFNLGG-------SAHEI--GVKQVAHYL 227

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            ++    H +          +   + V  +I +    +        + L   + +A  +G
Sbjct: 228 WENYSVSHGVKFI-------TIPFEGVVSEILERIDNSYMGVVLKRMMLRAGSQIAESMG 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +V G      S         I  +   +         V  PL+ + K E   ++++I
Sbjct: 281 IDALVTGESIAQVSSQTLKNLKVIDGVTETL---------VLRPLITMDKPEIINISREI 331

Query: 188 GGQDL 192
              D 
Sbjct: 332 DTYDF 336


>gi|73990460|ref|XP_866440.1| PREDICTED: similar to GMP synthase [glutamine-hydrolyzing]
           (Glutamine amidotransferase) (GMP synthetase) isoform 6
           [Canis familiaris]
          Length = 690

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 54/188 (28%), Gaps = 5/188 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        D+V  +  D G   K E +      KK+     + 
Sbjct: 243 KVLVLLSGGVDSTVCTALLNRALSQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQRERE 302

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +++         A   +            + +       FV   N +             
Sbjct: 303 REAETYRQREKQAPCREPDVGLDPCEDPEEKRKIIGDT-FVKIANEVIGEMNLKPEEVFL 361

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWKLAQ 185
               +        S     + + I+       L         V  PL    K E   L +
Sbjct: 362 AQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKDEVRILGR 421

Query: 186 DIGGQDLV 193
           ++G  + +
Sbjct: 422 ELGLPEEL 429


>gi|294010267|ref|YP_003543727.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Sphingobium japonicum UT26S]
 gi|292673597|dbj|BAI95115.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Sphingobium japonicum UT26S]
          Length = 373

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 49/191 (25%), Gaps = 9/191 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   + A         ++   Y     V      C  + I +      
Sbjct: 20  RIVVAMSGGVDSSVVAALAARTGAETIGVTLQLYDHGAAVGRTGSCCAGQDIRDARAVAD 79

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++            S+  + A +      P   V     +       +A  LG 
Sbjct: 80  RIGIAHYVFD---YESRFRDSVIADFADEYMAGRTPIPCVKCNMGVKFTDLFQIARDLGA 136

Query: 129 TNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +     V  V     +                          +  PL  L K +  ++
Sbjct: 137 DCLATGHYVRRVEGPQGAELHRAADSARDQSYFLFATTQAQLDYLRFPLGGLPKPQVREI 196

Query: 184 AQDIGGQDLVN 194
           A ++G    + 
Sbjct: 197 AAELGLSVALK 207


>gi|262306083|gb|ACY45634.1| gln amidotransferase [Nicoletia meinerti]
          Length = 197

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               LLL SGG DS+ C +      R D+V  +  D G   K E +      +K+   + 
Sbjct: 43  NNKVLLLVSGGIDSTVCAALLHKALREDQVIAVHIDNGFMRKNESQKVEESLEKLGLRLK 102

Query: 66  KW 67
             
Sbjct: 103 VI 104


>gi|253990910|ref|YP_003042266.1| thiamine biosynthesis protein ThiI [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253782360|emb|CAQ85524.1| Thiamine biosynthesis protein thiI [Photorhabdus asymbiotica]
          Length = 482

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------SAHEI--GVKQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +              + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHKVRFVA-------VDFEPVVAEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I      +         +  PL+   K    +LA++IG +
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIIRLAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|212224868|ref|YP_002308104.1| ATPase [Thermococcus onnurineus NA1]
 gi|212009825|gb|ACJ17207.1| ATPase [Thermococcus onnurineus NA1]
          Length = 305

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 48/193 (24%), Gaps = 27/193 (13%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKK 59
             ++K     L++ SGG+DS+            +E L  + G     E   E      + 
Sbjct: 43  YKLLKPDERVLVVVSGGKDSAVTAYVLKKLGYDIECLHINLGIGEYSEKSEEYAKRQCEA 102

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +   +   +      H +                      +            +      
Sbjct: 103 LGVPLHIVRVKELLGHGI---------------------GEVRTRRPTCSYCGLTKRYIF 141

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIR----AIETAINLGMESHVTVHTPLMWL 175
              AY  G   +  G    D + +             A +  +  G    V    PL  L
Sbjct: 142 NKFAYDNGFDAVATGHNLDDEASFIFSNLMHWNTQYLAKQGPLTPGEGKFVKKIKPLYEL 201

Query: 176 KKYETWKLAQDIG 188
            + E    A   G
Sbjct: 202 TEREVVAYALANG 214


>gi|37527743|ref|NP_931088.1| thiamine biosynthesis protein ThiI [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|44888378|sp|Q7N0J9|THII_PHOLL RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|36787179|emb|CAE16256.1| Thiamine biosynthesis protein ThiI [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 482

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------SAHEI--GVKQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +              + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHKVRFVA-------VDFEPVVAEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I      +         +  PL+   K    +LA++IG +
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIIRLAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|265764899|ref|ZP_06093174.1| tRNA methyl transferase [Bacteroides sp. 2_1_16]
 gi|263254283|gb|EEZ25717.1| tRNA methyl transferase [Bacteroides sp. 2_1_16]
          Length = 364

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 49/187 (26%), Gaps = 10/187 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVEL-ECRLCVRKKIV 61
           +++K    LL  SGG DSS      L+    V  ++F  Y      E  E    +  ++ 
Sbjct: 1   MMEKNKRVLLGMSGGTDSSVAAMLLLEAGYEVTGVTFRFYEFNGSTEYLEDARALAARLG 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                +         + +    D   S  T        +           + + + + AT
Sbjct: 61  IGHITYDARKVFQEQI-IDYFIDEYMSGHTPVPCTLCNNQLKWPLLAKIADEMGIFYLAT 119

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
             Y                    D         +  +         +  P+  + K E  
Sbjct: 120 GHYVRKQWIDGNYYIAPAEDVDKDQSFFLWGLRQEILQ-------RMLLPMGGMTKSEAR 172

Query: 182 KLAQDIG 188
             A   G
Sbjct: 173 AYAAGRG 179


>gi|15892333|ref|NP_360047.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rickettsia conorii str. Malish 7]
 gi|20455354|sp|Q92IL0|MNMA_RICCN RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|15619478|gb|AAL02948.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rickettsia conorii str. Malish 7]
          Length = 370

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 55/194 (28%), Gaps = 9/194 (4%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKK 59
           M ++  K  + ++  SGG DSS   +   ++   V  ++   Y     V  +   C  + 
Sbjct: 6   MINLGDKQSTIVVAMSGGVDSSAVAAMLHEQGHNVIGITLQLYDHGMAVGKKNACCAGQD 65

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           I +            ++L           S+  N          P   V     +     
Sbjct: 66  IYDAKMVANKLGIPHYVLDYEN---KFKESVIDNFVDSYLQGETPLPCVQCNKSVKFRDL 122

Query: 120 ATLAYRLGITNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
              A  LG   +     V  +   + +                     E    +  PL  
Sbjct: 123 IKTARELGADKLATGHYVRKINGDNGAELHTGLDPAKDQSYFLFTTTKEQLEYLRFPLGG 182

Query: 175 LKKYETWKLAQDIG 188
           L K ET KLA   G
Sbjct: 183 LTKDETRKLASKFG 196


>gi|330895673|gb|EGH27965.1| ExsB family protein [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 201

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 66/215 (30%), Gaps = 33/215 (15%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            + LL SGG DS +   W          ++ +YGQ                       + 
Sbjct: 2   KSALLLSGGMDSLSIAWWKRPD----IAITLNYGQLAAKAEIAASRA---------ICQR 48

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                H+L +      S     +            + + P RN + +  AA  A   G+T
Sbjct: 49  LEIPHHVLEIDCRHLGSGDMAGRQADDLAPA----SDWWPYRNQMLVTLAAMKAISFGVT 104

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
           ++ +G  ++D             A  + +    E  + V  P + +      +++     
Sbjct: 105 HLWLGTVKSDVFHRDGTPEFM--AAISRLLSLQEGGMVVEAPAIEMTTAGLVRIS----- 157

Query: 190 QDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPAC 224
             +    L  +H+C+             C +C  C
Sbjct: 158 -GIPASCLAWAHSCHKAD--------VPCGNCRGC 183


>gi|125973240|ref|YP_001037150.1| tRNA-specific 2-thiouridylase MnmA [Clostridium thermocellum ATCC
           27405]
 gi|256003718|ref|ZP_05428706.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium thermocellum DSM 2360]
 gi|281417440|ref|ZP_06248460.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium thermocellum JW20]
 gi|205813738|sp|A3DDC8|MNMA_CLOTH RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|125713465|gb|ABN51957.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium thermocellum ATCC 27405]
 gi|255992279|gb|EEU02373.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium thermocellum DSM 2360]
 gi|281408842|gb|EFB39100.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium thermocellum JW20]
 gi|316940529|gb|ADU74563.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium thermocellum DSM 1313]
          Length = 359

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 55/197 (27%), Gaps = 13/197 (6%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL---ECRLCVRKKIVELM 64
               ++  SGG DSS   +  L++   V   +         E    E   C    + +  
Sbjct: 3   KKKVMVGMSGGVDSSVAAAILLEQGYEVIGATMQIWPDTDEETKLVEGGCCSLSAVDDAR 62

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     ++L      DI   S+      +      PN  +     +        A 
Sbjct: 63  SVANKLGIPYYVLN---FKDIFEKSVINYFKDEYLKGRTPNPCIACNRFVKFESMLNKAL 119

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETA-------INLGMESHVTVHTPLMWLKK 177
            +GI  I  G            R+   +++           N+  E    +  P+    K
Sbjct: 120 SMGIDYIATGHYAIITYDDNKKRYLLKKSVTQQKDQTYALYNVTQEQLKHILMPIGNFTK 179

Query: 178 YETWKLAQDIGGQDLVN 194
            +    A+++G      
Sbjct: 180 EQVRAKAKELGLYVASK 196


>gi|330995862|ref|ZP_08319758.1| putative argininosuccinate synthase [Paraprevotella xylaniphila YIT
           11841]
 gi|332877299|ref|ZP_08445047.1| putative argininosuccinate synthase [Capnocytophaga sp. oral taxon
           329 str. F0087]
 gi|329574393|gb|EGG55964.1| putative argininosuccinate synthase [Paraprevotella xylaniphila YIT
           11841]
 gi|332684682|gb|EGJ57531.1| putative argininosuccinate synthase [Capnocytophaga sp. oral taxon
           329 str. F0087]
          Length = 401

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 54/195 (27%), Gaps = 10/195 (5%)

Query: 7   KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
            A   ++ FSGG D S T +  A ++   V     + G  +  +L+       K+     
Sbjct: 1   MAKKVVVAFSGGLDTSYTVMYLAKEKGYEVYAACANTGGFSAEQLKANEENAYKLGAKEY 60

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D   E +   L  +    +        + +    +       R    +   A     
Sbjct: 61  VTLDVTKEYYEKSLRYM-IYGNVLRNNCYPISVSSERIFQAIAIARYANEVGADAIAHGS 119

Query: 126 LGI------TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            G        ++   V           R   +   E    L    +    T L +     
Sbjct: 120 TGAGNDQIRFDMTFLVMAPGMEIITLTRDSNLSRQEEVDYLNQHGYYADFTKLKYSYNVG 179

Query: 180 TWKLAQDIGGQDLVN 194
            W     I G ++++
Sbjct: 180 IW--GTSICGGEILD 192


>gi|296242462|ref|YP_003649949.1| thiamine biosynthesis protein [Thermosphaera aggregans DSM 11486]
 gi|296095046|gb|ADG90997.1| thiamine biosynthesis protein [Thermosphaera aggregans DSM 11486]
          Length = 381

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 53/185 (28%), Gaps = 24/185 (12%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++LFSGG DS+     A+ R  R+  +  D      +         ++ +E +    +  
Sbjct: 176 VVLFSGGVDSALASILAVKRGVRIIPVFID------MSPYWSSMAVERAMEGLKLVAEK- 228

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
                +P   L       +     +                      A+ +A +     I
Sbjct: 229 -----IPWNTLKAYI---VRNTPRILANAQIPLRYRCLACKATMYKIASLVAEKENCDFI 280

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           + G      +          +       L       +  PL+++ K E    ++  G   
Sbjct: 281 ITGESLGQVAS---------QTPSNLKTLTGLIDKLIMRPLIFMDKEEIIDASRKTGLST 331

Query: 192 LVNLI 196
           L   +
Sbjct: 332 LSREV 336


>gi|153939777|ref|YP_001392187.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum F str. Langeland]
 gi|205810589|sp|A7GHC7|MNMA2_CLOBL RecName: Full=tRNA-specific 2-thiouridylase mnmA 2
 gi|152935673|gb|ABS41171.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum F str. Langeland]
 gi|295320186|gb|ADG00564.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum F str. 230613]
          Length = 353

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 49/186 (26%), Gaps = 9/186 (4%)

Query: 7   KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
            +   + L  SGG DSS       +R   V  +  D   R++ E  C     +    +  
Sbjct: 1   MSKGTVALAMSGGVDSSVSAYILKERGYDVIGIYMDLW-RDEREEYCNKSAAEDARRVAE 59

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           K        H++ +      +      +  +  +  N               F A   + 
Sbjct: 60  KLD---IPFHVINIEKKFKNNVIDYFIDEYLSGRTPNPC-VACNKTIKFEAFFNAAKEFG 115

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWK 182
                        + +G            +    +       +     P    KK    +
Sbjct: 116 ADFMATGHYCKIEERNGRKVIVKAEDDKKDQTYMMYNLKQYQLERTIMPCGEYKKDHIRE 175

Query: 183 LAQDIG 188
           +A+ IG
Sbjct: 176 IAESIG 181


>gi|325983111|ref|YP_004295513.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Nitrosomonas sp. AL212]
 gi|325532630|gb|ADZ27351.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Nitrosomonas sp. AL212]
          Length = 359

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 48/192 (25%), Gaps = 10/192 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS        +   V  L     + +  +  C         + +     
Sbjct: 5   RVIVGMSGGVDSSVAAYVLKQQGYDVVGLFMKNWEDDDTDEYCSSRQ-----DFIDAVSV 59

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +   D  + +          +      + Q    PN  V     I        A +LG  
Sbjct: 60  ADVIDIPIEIVNFSIEYKERVFSQFLAEYQAGRTPNPDVLCNAEIKFKAFLDHANKLGAD 119

Query: 130 NIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            I  G            +                 L          P+  L K E  K+A
Sbjct: 120 YIATGHYARVRKAGGVFQLLKGEDGNKDQSYFLYRLNQAQLAKSLFPIGHLYKREVRKIA 179

Query: 185 QDIGGQDLVNLI 196
           +++   +     
Sbjct: 180 RELKLPNSSKKD 191


>gi|189502542|ref|YP_001958259.1| tRNA-specific 2-thiouridylase MnmA [Candidatus Amoebophilus
           asiaticus 5a2]
 gi|229470222|sp|B3ETH8|MNMA_AMOA5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|189497983|gb|ACE06530.1| hypothetical protein Aasi_1200 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 376

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 57/195 (29%), Gaps = 11/195 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIVEL 63
           K    L+  SGG DSS       ++   +  L+    DY      + E   C    I + 
Sbjct: 2   KKGRVLVAMSGGIDSSITALLLHEQGYEIVGLTMKTWDYVSSGGRKKETGCCSLDSINDA 61

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                       IL    + +     +  N   +      PN  V     I        A
Sbjct: 62  RNVAVSLGFPHIILD---IREEFGDYVISNFTSEYLAGRTPNPCVLCNTHIKWDALLRRA 118

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME--SHVTVHTPLMWL---KKY 178
            +L    I  G                 + +    +  +   S  ++   L+ L    K 
Sbjct: 119 DKLNCEYIATGHYANIRHENGRYIVSRGKDLNKDQSYALWGVSQESLSRTLLPLGVFTKP 178

Query: 179 ETWKLAQDIGGQDLV 193
           E  ++A   G ++LV
Sbjct: 179 EIREIASQRGFKELV 193


>gi|88860122|ref|ZP_01134761.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudoalteromonas tunicata D2]
 gi|88818116|gb|EAR27932.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudoalteromonas tunicata D2]
          Length = 366

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 56/191 (29%), Gaps = 11/191 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS      + +  +VE L     + +  +  C       +
Sbjct: 1   MSD--NSNIKVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDTDEYCA--AADDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +     +      H +      +   +     +             +  + I F  F  
Sbjct: 57  KDAQAVCEKLGIPLHTVN--FASEYWDNVFQYFLEEYKAGRTPNPDIMCNKEIKFKAFLQ 114

Query: 121 TLAYRLGITNI---VIGVCETDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWL 175
             A  L    I        E     Y   R D     ++     L  E       P+  +
Sbjct: 115 FAAEALNADFIATGHYVRRELRGDKYVMIRGDDDNKDQSYFLYTLSHEHLAQTLFPVGEI 174

Query: 176 KKYETWKLAQD 186
           +K E  ++A++
Sbjct: 175 EKPEVRRIAEE 185


>gi|330982292|gb|EGH80395.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 484

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 57/183 (31%), Gaps = 29/183 (15%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWKD 69
           L+L SGG DS+      + R        F+ G R      +E    + KK          
Sbjct: 183 LVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAHELGVMEVAHFIWKKYG-------- 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     +    +  S   + V  +I      +        + L  A+ +A RL I 
Sbjct: 235 ----------SSQRVLFVSVPFEEVLGEILQKVDNSHMGVVLKRMMLRAASAVADRLEID 284

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G   +  +         I A    +         V  PL+   K +   LA +IG 
Sbjct: 285 VLVTGEAISQVASQTLPNLSLIDAATEKL---------VLRPLVATHKQDIVDLATEIGT 335

Query: 190 QDL 192
            D 
Sbjct: 336 ADF 338


>gi|237709041|ref|ZP_04539522.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|265755532|ref|ZP_06090153.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|229457103|gb|EEO62824.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|263234138|gb|EEZ19731.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 435

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 54/183 (29%), Gaps = 20/183 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +  L    + +  +  ++G   K E E  + V K  +     +
Sbjct: 141 KKVLLALSGGVDSSVVAALLLKAIGNNLVCVHVNHGLMRKGESEAVIEVFKNQLNANLIY 200

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D+           L  + + +  +     I    +       R +             G
Sbjct: 201 VDATDR-------FLSKLENVADPEQKRKIIGGEFIRVFEEEARKL------------NG 241

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           +++      L  +    +  PL  L K E      ++
Sbjct: 242 IDFLGQGTIYPDIVESGTKTAKMVKSHHNVGGLPEDLQFELVEPLRQLFKDEVRACGVEL 301

Query: 188 GGQ 190
           G  
Sbjct: 302 GLP 304


>gi|212692102|ref|ZP_03300230.1| hypothetical protein BACDOR_01597 [Bacteroides dorei DSM 17855]
 gi|237724624|ref|ZP_04555105.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|212665494|gb|EEB26066.1| hypothetical protein BACDOR_01597 [Bacteroides dorei DSM 17855]
 gi|229436819|gb|EEO46896.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
          Length = 435

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 54/183 (29%), Gaps = 20/183 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +  L    + +  +  ++G   K E E  + V K  +     +
Sbjct: 141 KKVLLALSGGVDSSVVAALLLKAIGNNLVCVHVNHGLMRKGESEAVIEVFKNQLNANLIY 200

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D+           L  + + +  +     I    +       R +             G
Sbjct: 201 VDATDR-------FLSKLENVADPEQKRKIIGGEFIRVFEEEARKL------------NG 241

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           +++      L  +    +  PL  L K E      ++
Sbjct: 242 IDFLGQGTIYPDIVESGTKTAKMVKSHHNVGGLPEDLQFELVEPLRQLFKDEVRACGVEL 301

Query: 188 GGQ 190
           G  
Sbjct: 302 GLP 304


>gi|150006079|ref|YP_001300823.1| putative GMP synthase [Bacteroides vulgatus ATCC 8482]
 gi|254883447|ref|ZP_05256157.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|319641766|ref|ZP_07996447.1| GMP synthase 2 [Bacteroides sp. 3_1_40A]
 gi|149934503|gb|ABR41201.1| putative GMP synthase [Bacteroides vulgatus ATCC 8482]
 gi|254836240|gb|EET16549.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|317386600|gb|EFV67498.1| GMP synthase 2 [Bacteroides sp. 3_1_40A]
          Length = 435

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 54/183 (29%), Gaps = 20/183 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +  L    + +  +  ++G   K E E  + V K  +     +
Sbjct: 141 KKVLLALSGGVDSSVVAALLLKAIGNNLVCVHVNHGLMRKGESEAVIEVFKNQLNANLIY 200

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D+           L  + + +  +     I    +       R +             G
Sbjct: 201 VDATDR-------FLSKLENVADPEQKRKIIGGEFIRVFEEEARKL------------NG 241

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           +++      L  +    +  PL  L K E      ++
Sbjct: 242 IDFLGQGTIYPDIVESGTKTAKMVKSHHNVGGLPEDLQFELVEPLRQLFKDEVRACGVEL 301

Query: 188 GGQ 190
           G  
Sbjct: 302 GLP 304


>gi|90408225|ref|ZP_01216392.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Psychromonas sp. CNPT3]
 gi|90310671|gb|EAS38789.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Psychromonas sp. CNPT3]
          Length = 369

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 52/184 (28%), Gaps = 9/184 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS        +  +VE L     + +     C     + + +       
Sbjct: 8   KVIVGMSGGVDSSVSAYLLQQQGYQVEGLFMKNWEEDDSSEYCA--AAQDLQDAQAVCDK 65

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              + H +  +   +   +     +A            +  + I F  F    A  LG  
Sbjct: 66  LDIKLHTVNFS--AEYWDNVFEHFLAEYKAGRTPNPDIMCNKEIKFKAFLEFAAEDLGAD 123

Query: 130 NIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            I  G            +                 +G +       P+  L+K E  ++A
Sbjct: 124 FIATGHYVRRREVNGHVQLLRGLDTNKDQSYFLYAVGEKQIAQTLFPVGELEKPEVRRIA 183

Query: 185 QDIG 188
           +  G
Sbjct: 184 EQQG 187


>gi|312622080|ref|YP_004023693.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202547|gb|ADQ45874.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Caldicellulosiruptor kronotskyensis 2002]
          Length = 360

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 40/151 (26%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                L+  SGG DSS   +   +    V   +    Q    +   R      +  +   
Sbjct: 1   MKKKVLVAMSGGVDSSVAAAILKEEGYEVYGATMQIWQTETEDELIREKSCCSLTAVDDA 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            + +   D    +  + D     +      +      PN  +     I        A  L
Sbjct: 61  RRVAHILDIPYYVFNMKDDFKKEVINYFVDEYIKGRTPNPCIMCNRKIKFELFLKKAMVL 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETA 157
           G+  I  G           CR+   R+    
Sbjct: 121 GMDYIATGHYAIIEYDKSLCRYLLKRSKARE 151


>gi|259909273|ref|YP_002649629.1| thiamine biosynthesis protein ThiI [Erwinia pyrifoliae Ep1/96]
 gi|224964895|emb|CAX56418.1| Thiamine biosynthesis protein ThiI [Erwinia pyrifoliae Ep1/96]
 gi|283479328|emb|CAY75244.1| Thiamine biosynthesis protein thiI [Erwinia pyrifoliae DSM 12163]
          Length = 482

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++       
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWKR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 YGSTHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRVASQIAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K    KL+++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIIKLSREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|257125311|ref|YP_003163425.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Leptotrichia buccalis C-1013-b]
 gi|257049250|gb|ACV38434.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Leptotrichia buccalis C-1013-b]
          Length = 364

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 57/191 (29%), Gaps = 7/191 (3%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE-LECRLCVRKK 59
           MN  +      ++  SGG DSS        +   V  ++  +      E      C    
Sbjct: 1   MNKKLD-DKKVVVGMSGGIDSSVAALLLKQQGYEVIGVTLKHLPDELSENPGKTCCSLDD 59

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           I +      +     ++L +    +     + +           P+  V     + +   
Sbjct: 60  INDARYTCYNLGIPHYVLNVV---EEFKKDVMEYFIKMYNAGKTPSPCVICDEKVKIKKL 116

Query: 120 ATLAYRLGITNI--VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
              A ++GI  I        ++ +     +++          L  +       PL   +K
Sbjct: 117 VEFADKMGIKYISTGHYSKVSENNMLLWDKNNRKDQTYMLYRLDKDIVERFLFPLAEYEK 176

Query: 178 YETWKLAQDIG 188
            E  ++A+  G
Sbjct: 177 SEVREIARQNG 187


>gi|268592053|ref|ZP_06126274.1| thiamine biosynthesis/tRNA modification protein ThiI [Providencia
           rettgeri DSM 1131]
 gi|291312447|gb|EFE52900.1| thiamine biosynthesis/tRNA modification protein ThiI [Providencia
           rettgeri DSM 1131]
          Length = 483

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVKQIAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHKVRFIAVN-------FEPVVAEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I      +         V  PL+   K    KLA+ IG +
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDNASDTL---------VLRPLISHDKEHIIKLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|255659674|ref|ZP_05405083.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mitsuokella multacida DSM 20544]
 gi|260848239|gb|EEX68246.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mitsuokella multacida DSM 20544]
          Length = 366

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/226 (12%), Positives = 58/226 (25%), Gaps = 16/226 (7%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--QRNKVELECRLCVRKKIVELMP 65
               ++  SGG DSS   +   ++      ++       R+  E +   C    + +   
Sbjct: 3   KKKVVVAMSGGVDSSLTAALLKEQGYEAIGVTMRLSEESRDFDENDRGCCSLSSVDDARR 62

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +      + +      ++    +             PN  +     +        A  
Sbjct: 63  VAEIIGIPHYTMN---FKEMFQEKVIDYFLADYAKGWTPNPCIACNRYVKFEGLLQKAME 119

Query: 126 LGITNIVIGVCETDYSGY------PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           LG   +  G                              +L  +S      PL    K E
Sbjct: 120 LGADYVATGHYARIAQDESGRYVLKKGIDTHKDQSYALYHLNQQSLAHFLMPLGDYTKVE 179

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACY 225
           T ++A+            +E   C++   D +          P+C 
Sbjct: 180 TREMAERYKLPVAHKPDSQEI--CFVPHDDYKAYLRA---KNPSCL 220


>gi|320016360|gb|ADV99931.1| sulfur transfer protein [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 483

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 181 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------SAHEI--GVKQVAHYLWNR 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 232 FGSSHRVRFIAI-------DFEPVVGEILEKVEDGQMGVVLKRMMVRAASQVAERHGVQA 284

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K     LA+ IG +
Sbjct: 285 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIINLARQIGTE 335

Query: 191 DL 192
           D 
Sbjct: 336 DF 337


>gi|312793905|ref|YP_004026828.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312181045|gb|ADQ41215.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 360

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 40/151 (26%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                L+  SGG DSS   +   +    V   +    Q    +   R      +  +   
Sbjct: 1   MKKKVLVAMSGGVDSSVAAAILKEEGYEVYGATMQIWQTETEDELIREKSCCSLTAVDDA 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            + +   D    +  + D     +      +      PN  +     I        A  L
Sbjct: 61  RRVAHILDIPYYVFNMKDDFKKEVINYFVDEYIKGRTPNPCIMCNRKIKFELFLKKAMVL 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETA 157
           G+  I  G           CR+   R+    
Sbjct: 121 GMDYIATGHYAIIEYDKSLCRYLLKRSKARE 151


>gi|303256580|ref|ZP_07342594.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderiales bacterium 1_1_47]
 gi|302860071|gb|EFL83148.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderiales bacterium 1_1_47]
          Length = 378

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 51/190 (26%), Gaps = 10/190 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +  + ++  SGG DS+        +   V  L     + +     C     + +++    
Sbjct: 19  ETKTVVVGLSGGVDSAVSAYLLKKQGYEVIGLFMKNWEDDDDSEYCSSR--QDLIDATAV 76

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 +   +            +      +      PN  V   + I        A RL
Sbjct: 77  ADVIGID---IEAVNFAKEYKDRVFAEFLSEYSAGRTPNPDVLCNSEIKFKAFLDHAIRL 133

Query: 127 GITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           G   I  G                   +T         L          P+  + K E  
Sbjct: 134 GADKIATGHYARVRERDGLFELLKGVDNTKDQSYFLNRLNQYQLSKAMFPVGDMCKTEVR 193

Query: 182 KLAQDIGGQD 191
           ++A++IG  +
Sbjct: 194 RIAEEIGLPN 203


>gi|188588033|ref|YP_001920516.1| tRNA-specific 2-thiouridylase MnmA [Clostridium botulinum E3 str.
           Alaska E43]
 gi|251778087|ref|ZP_04821007.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum E1 str. 'BoNT E Beluga']
 gi|205813690|sp|B2V3V9|MNMA_CLOBA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|188498314|gb|ACD51450.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum E3 str. Alaska E43]
 gi|243082402|gb|EES48292.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum E1 str. 'BoNT E Beluga']
          Length = 361

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 51/203 (25%), Gaps = 10/203 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIV 61
           +       L+  SGG DSS       ++   V   +    Q +K   E     C    + 
Sbjct: 1   MSLTKKKVLVGMSGGVDSSVAAYLLKEQGYEVIGATMQIWQEDKEVEEREGGCCSLSAVE 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +            ++L      D     + +    +  D   PN  +     +       
Sbjct: 61  DARRVCDKLDIPFYVLN---FRDSFKKKVIEPFIQEYIDGRTPNPCIECNKHLKFDELLR 117

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH-----TPLMWLK 176
            A  +G+  I  G                           + +           P     
Sbjct: 118 KAQGIGVDYIATGHYAKIEKKDDRYMLIRSDDDRKDQTYALYNFTQDQLAHTLMPCGEYT 177

Query: 177 KYETWKLAQDIGGQDLVNLILEE 199
           K    ++A++IG         EE
Sbjct: 178 KDRIREIAKEIGLAVHNKKDSEE 200


>gi|326566320|gb|EGE16471.1| thiamine biosynthesis protein ThiI [Moraxella catarrhalis 12P80B1]
 gi|326569496|gb|EGE19556.1| thiamine biosynthesis protein ThiI [Moraxella catarrhalis BC8]
 gi|326574039|gb|EGE23988.1| thiamine biosynthesis protein ThiI [Moraxella catarrhalis CO72]
 gi|326577322|gb|EGE27209.1| thiamine biosynthesis protein ThiI [Moraxella catarrhalis O35E]
          Length = 496

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 61/189 (32%), Gaps = 27/189 (14%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY-GQRNKVELECRLCVRKKIVEL 63
           +      L L SGG DSS      + R  RV    F+  GQ +++ ++            
Sbjct: 184 MSTQEDVLSLISGGFDSSVASHMFMRRGSRVHYCFFNLGGQAHELGVKQM---------A 234

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              W        +           +   + V  +I               + +  A+ +A
Sbjct: 235 YHLWSRYSLSHKV--------WFITVDFEPVVAEILKTIDDGHMGVVLKRMMVKAASQIA 286

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            ++ I  +V G      +       + I A  + +         +  PL+   K +  K+
Sbjct: 287 QQIKIQALVTGEAMGQVASQTLTNLNAIDAASSTL---------ILRPLITSDKEDIIKM 337

Query: 184 AQDIGGQDL 192
           A+ IG  ++
Sbjct: 338 AEKIGTANI 346


>gi|325265024|ref|ZP_08131751.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium sp. D5]
 gi|324029714|gb|EGB91002.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium sp. D5]
          Length = 356

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 54/188 (28%), Gaps = 12/188 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ---RNKVELECRLCVRKKIVELMPK 66
             ++  SGG DSS       ++   V  ++    Q   R   E     C    + +    
Sbjct: 3   KVVVGMSGGVDSSVAAYLLKEQGYDVIGVTMQIWQDEDRAVQEENGGCCGLSAVEDARRV 62

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +     +++            +      + ++   PN  +     +        +  +
Sbjct: 63  AAELEIPYYVMN---FKQEFKEHVIDYFVEEYRNGRTPNPCIACNRYVKWESLLHRSMAI 119

Query: 127 GITNIVIGVCETDY---SGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW---LKKYET 180
           G   I  G         +G    R     A +    L   +   +   LM      K E 
Sbjct: 120 GAEYIATGHYARVVKLDNGRFTLRRSATLAKDQTYALYNLTQEQLEHTLMPVGEYSKDEV 179

Query: 181 WKLAQDIG 188
            ++A+ IG
Sbjct: 180 RRIAEKIG 187


>gi|237809068|ref|YP_002893508.1| tRNA-specific 2-thiouridylase MnmA [Tolumonas auensis DSM 9187]
 gi|259495840|sp|C4L952|MNMA_TOLAT RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|237501329|gb|ACQ93922.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Tolumonas auensis DSM 9187]
          Length = 369

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 51/184 (27%), Gaps = 9/184 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS        +  +VE L     + +  +  C       + +       
Sbjct: 8   KVIVGMSGGVDSSVSAYLLQQQGYQVEGLFMKNWEEDDSDEYCS--AATDLADAQAVCDK 65

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              + H +      +   +     +A            +  + I F  F    A  LG  
Sbjct: 66  LGIKLHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGAD 123

Query: 130 NIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            I  G            R      +          L  E       P+  L+K +   +A
Sbjct: 124 YIATGHYVRRDDSTGHPRLLRGLDNNKDQSYFLYTLSSEQIAQSLFPVGDLEKPQVRAIA 183

Query: 185 QDIG 188
           + +G
Sbjct: 184 EQLG 187


>gi|145589976|ref|YP_001156573.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
 gi|205816900|sp|A4SZU5|MNMA_POLSQ RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|145048382|gb|ABP35009.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
          Length = 370

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 49/187 (26%), Gaps = 10/187 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +    ++  SGG DSS       ++   V  L     + +  +  C         + +  
Sbjct: 13  QTKKVVIGMSGGVDSSVAAWMLKEQGFEVIGLFMKNWEDDDNDEYCSARQ-----DWLDV 67

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +      +            +  +   +      PN  V     I        A  L
Sbjct: 68  VSVADMIGIDVEAVNFAAEYRERVFADFLCEYAAGRTPNPDVLCNAEIKFKAFLDHAMSL 127

Query: 127 GITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           G   I  G            +       +         L  +    V  PL  + K E  
Sbjct: 128 GADAIATGHYARVRHEGGRVQLLKAVDASKDQSYFLHRLTQQQLSKVMFPLGEIPKTEVR 187

Query: 182 KLAQDIG 188
           K+A+ IG
Sbjct: 188 KIAEQIG 194


>gi|57640128|ref|YP_182606.1| GMP synthase subunit B [Thermococcus kodakarensis KOD1]
 gi|62286909|sp|Q5JFM1|GUAAB_PYRKO RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
           AltName: Full=GMP synthetase
 gi|57158452|dbj|BAD84382.1| GMP synthase, PP-loop-ATPase component [Thermococcus kodakarensis
           KOD1]
          Length = 307

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 60/185 (32%), Gaps = 25/185 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A++  SGG DSST    A     DR+  +  + G   K E E  +   +          
Sbjct: 21  KAIIALSGGVDSSTAAVLAHRAIGDRLHAVFVNTGFMRKGEPEFVVKTFR---------D 71

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +     H +  +         +T     +                +F+     +A  +  
Sbjct: 72  EFGLNLHYVDASERFFRELKGVTDPEEKR-----------KIIGRVFIEVFEEVAKEINA 120

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++        +      H  I++      L    ++ +  PL  L K E  +LA+++G
Sbjct: 121 DFLIQ----GTIAPDWIESHGKIKSHHNVGGLPERLNLKLIEPLRDLYKDEVRELAKELG 176

Query: 189 GQDLV 193
             + +
Sbjct: 177 LPEKI 181


>gi|302325766|gb|ADL24967.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fibrobacter succinogenes subsp. succinogenes S85]
          Length = 390

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 56/202 (27%), Gaps = 16/202 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLC------VRK 58
           + +     +  SGG DS+        +   V  ++      +                  
Sbjct: 25  MSQKKRVAVGLSGGVDSALSAYLLKKQGYEVVGMTMATWDDSVKMPAVEGREGCYGPSED 84

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
           K +E      + LG  H +    + +     +      + +    PN  V     I    
Sbjct: 85  KNIEEAKLVAERLGIPHYVV--PVAEDYKREVLDYFRAEYRAGRTPNPCVRCNQSIKFGA 142

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCR--------HDTIRAIETAINLGMESHVTVHT 170
               A +LGI              + +           +          L  E   TV  
Sbjct: 143 LQHAARKLGIDFDYFATGHYARLDFKNPDVPFLYEALDEHKDQTYFLSRLSAEQLSTVIF 202

Query: 171 PLMWLKKYETWKLAQDIGGQDL 192
           PL  ++K +   LA++IG  D 
Sbjct: 203 PLGGMQKADVKALAKEIGWDDF 224


>gi|261415477|ref|YP_003249160.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fibrobacter succinogenes subsp. succinogenes S85]
 gi|261371933|gb|ACX74678.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fibrobacter succinogenes subsp. succinogenes S85]
          Length = 366

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 56/202 (27%), Gaps = 16/202 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLC------VRK 58
           + +     +  SGG DS+        +   V  ++      +                  
Sbjct: 1   MSQKKRVAVGLSGGVDSALSAYLLKKQGYEVVGMTMATWDDSVKMPAVEGREGCYGPSED 60

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
           K +E      + LG  H +    + +     +      + +    PN  V     I    
Sbjct: 61  KNIEEAKLVAERLGIPHYVV--PVAEDYKREVLDYFRAEYRAGRTPNPCVRCNQSIKFGA 118

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCR--------HDTIRAIETAINLGMESHVTVHT 170
               A +LGI              + +           +          L  E   TV  
Sbjct: 119 LQHAARKLGIDFDYFATGHYARLDFKNPDVPFLYEALDEHKDQTYFLSRLSAEQLSTVIF 178

Query: 171 PLMWLKKYETWKLAQDIGGQDL 192
           PL  ++K +   LA++IG  D 
Sbjct: 179 PLGGMQKADVKALAKEIGWDDF 200


>gi|149908394|ref|ZP_01897057.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Moritella sp. PE36]
 gi|149808557|gb|EDM68492.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Moritella sp. PE36]
          Length = 379

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 53/193 (27%), Gaps = 10/193 (5%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
              +      ++  SGG DSS        +  +VE L     + +  +  C     + + 
Sbjct: 10  TKALNSTKKVIVGMSGGVDSSVSAYLLQQQGYQVEGLFMKNWEDDDNDEYCA--AAEDLA 67

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +          E H +  +   +   +     +A            +  + I F  F   
Sbjct: 68  DAQAVCDKLGIELHAINFS--AEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLQF 125

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWL 175
            +  L    I +G   +                           L          P+  L
Sbjct: 126 ASEVLAADYIAMGHYVSRRQTADGKFEMLRGLDSNKDQSYFLYTLDHVQVSRSLFPVGEL 185

Query: 176 KKYETWKLAQDIG 188
           +K E  ++A++ G
Sbjct: 186 EKPEVRRIAEEQG 198


>gi|86608667|ref|YP_477429.1| tRNA-specific 2-thiouridylase MnmA [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|123502696|sp|Q2JM78|MNMA_SYNJB RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|86557209|gb|ABD02166.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 368

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 57/189 (30%), Gaps = 17/189 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            P  +   SGG DSST  +   ++   VE ++        +      C  + +V+     
Sbjct: 17  RPRIVAALSGGVDSSTVAALLQEQGYAVEGVTL------WLMRGKGQCCTEGLVDAAAVC 70

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA-YRL 126
           +      H++    L   +             +   P        ++        A  +L
Sbjct: 71  EQLGIPHHVVDSRELFQANIVDYLVA---GYAEGITPLPCSQCNKLVKFGPLLAYAREKL 127

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW-------LKKYE 179
           GI+ +  G            R+  +RA++   +     +      L           K +
Sbjct: 128 GISQMATGHYARVRFNAELGRYQLLRAVDRQKDQSYFLYDLSQEHLAHSLFPLGEYTKAQ 187

Query: 180 TWKLAQDIG 188
           T +LA   G
Sbjct: 188 TRQLAARYG 196


>gi|312877398|ref|ZP_07737363.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795872|gb|EFR12236.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Caldicellulosiruptor lactoaceticus 6A]
          Length = 360

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 40/151 (26%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                L+  SGG DSS   +   +    V   +    Q    +   R      +  +   
Sbjct: 1   MKKKVLVAMSGGVDSSVAAAILKEEGYEVYGATMQIWQTETEDELIREKSCCSLTAVDDA 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            + +   D    +  + D     +      +      PN  +     I        A  L
Sbjct: 61  RRVAHILDIPYYVFNMKDDFKKEVINYFVDEYIKGRTPNPCIMCNRKIKFELFLKKAMVL 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETA 157
           G+  I  G           CR+   R+    
Sbjct: 121 GMDYIATGHYAIIEYDKSLCRYLLKRSKARE 151


>gi|307293549|ref|ZP_07573393.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sphingobium chlorophenolicum L-1]
 gi|306879700|gb|EFN10917.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sphingobium chlorophenolicum L-1]
          Length = 376

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 49/188 (26%), Gaps = 9/188 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
            A   ++  SGG DSS   + A         ++   Y     V      C  + I +   
Sbjct: 20  NARRIVVAMSGGVDSSVVAALAARTGAETIGVTLQLYDHGAAVGRTGSCCAGQDIRDARA 79

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    ++            S+  + A +      P   V     +       +A  
Sbjct: 80  VADRIGIAHYVFD---YESRFRESVIADFADEYMAGRTPIPCVKCNMGVKFTDLFQIARD 136

Query: 126 LGITNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           LG   +     V  V     +                          +  PL  L K + 
Sbjct: 137 LGADCLATGHYVRRVEGPQGAELHRAADPARDQSYFLFATTQAQLDYLRFPLGGLPKPQV 196

Query: 181 WKLAQDIG 188
            ++A ++G
Sbjct: 197 REIAAELG 204


>gi|254173377|ref|ZP_04880050.1| N-type ATP pyrophosphatase superfamily protein [Thermococcus sp.
           AM4]
 gi|214032786|gb|EEB73615.1| N-type ATP pyrophosphatase superfamily protein [Thermococcus sp.
           AM4]
          Length = 271

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 37/98 (37%), Gaps = 2/98 (2%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRK 58
           + ++++    A++ +SGG+DS   L  A + +    +E +  D+G   +  +E    + +
Sbjct: 45  LKELMRDVNKAVVAYSGGKDSVVALYLAKEVYKVPELEAVMVDHGLMAEEAIENAKRIAE 104

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAM 96
            +       +    +     L        +   + +  
Sbjct: 105 HLGVPFKVLRYDYSDIFRNALLKAQSPCRACSKRTMEK 142


>gi|288799734|ref|ZP_06405193.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella sp. oral taxon 299 str. F0039]
 gi|288332982|gb|EFC71461.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella sp. oral taxon 299 str. F0039]
          Length = 357

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 50/189 (26%), Gaps = 8/189 (4%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN+ ++    A+ L SGG DSS  L   + +  + +      G   + E +C     + +
Sbjct: 1   MNENLQDKKIAV-LLSGGVDSSVVLYELVQQGLKPDCFYIKIGPEQEEEWDCSSE--EDL 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                       +  ++      +         +             +  R I F  F  
Sbjct: 58  EMATAVAHRYGCKLEVID--CHKEYWDQVTKYTMDKVKAGFTPNPDVMCNRLIKFGAFHD 115

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKK 177
                  +            +G            +    L       +     P+   +K
Sbjct: 116 KKGKDYDLIATGHYAQTEIINGKKWLVTSPDPVKDQTDFLAQIYDWQLKKAIFPIGHFQK 175

Query: 178 YETWKLAQD 186
            E   +A+ 
Sbjct: 176 DEVRVIAER 184


>gi|75910268|ref|YP_324564.1| tRNA-specific 2-thiouridylase MnmA [Anabaena variabilis ATCC 29413]
 gi|123608374|sp|Q3M5R7|MNMA_ANAVT RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|75703993|gb|ABA23669.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Anabaena variabilis ATCC 29413]
          Length = 352

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 56/187 (29%), Gaps = 15/187 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSST  +   ++   V  L+        +      C  + +++     +
Sbjct: 2   KKVVVGLSGGVDSSTAAAILHNQGYEVIGLTL------WLMKGKGQCCSEGMIDAAYICE 55

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                  ++ +  +                      +          +V  A    +LG 
Sbjct: 56  QLGIPHEVVDMRDVFQTHIVDYLVTGYGAGITPLPCSQCNKTVKFGPMVQYAR--EQLGC 113

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH-------TPLMWLKKYETW 181
             I  G            R+  +RA++   +     +            PL  ++K +T 
Sbjct: 114 DRIATGHYARISYDEASGRYQLLRAVDRNKDQSYFLYDLSQDLLAASLFPLGEMEKADTR 173

Query: 182 KLAQDIG 188
           ++A + G
Sbjct: 174 RIATEHG 180


>gi|77456574|ref|YP_346079.1| thiamine biosynthesis protein ThiI [Pseudomonas fluorescens Pf0-1]
 gi|123606290|sp|Q3KJG6|THII_PSEPF RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|77380577|gb|ABA72090.1| [ThiS-adenylate] sulfurtransferase [Pseudomonas fluorescens Pf0-1]
          Length = 484

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 56/183 (30%), Gaps = 29/183 (15%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWKD 69
           L+L SGG DS+      L R        F+ G R      +E    + KK          
Sbjct: 183 LVLMSGGFDSTVAAYQILRRGLMTHFCFFNLGGRAHELGVMEVAHFIWKKYG-------- 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     +    +  S   + V  +I      +        + L  A+++A RL I 
Sbjct: 235 ----------SSQRVLFVSVPFEEVLGEILGKVDDSHMGVVLKRMMLRAASSIAERLHID 284

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G   +  S         I  +   +         V  PL+   K +    A  IG 
Sbjct: 285 ALVTGEAISQVSSQTLPNLSVIDCVTDKL---------VLRPLIVAHKQDIIDTADQIGT 335

Query: 190 QDL 192
            D 
Sbjct: 336 GDF 338


>gi|168179339|ref|ZP_02614003.1| tRNA -methyltransferase [Clostridium botulinum NCTC 2916]
 gi|226950335|ref|YP_002805426.1| tRNA-specific 2-thiouridylase MnmA [Clostridium botulinum A2 str.
           Kyoto]
 gi|182669769|gb|EDT81745.1| tRNA -methyltransferase [Clostridium botulinum NCTC 2916]
 gi|226844215|gb|ACO86881.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum A2 str. Kyoto]
          Length = 353

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 49/186 (26%), Gaps = 9/186 (4%)

Query: 7   KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
            +   + L  SGG DSS       +R   V  +  D   R++ E  C     +    +  
Sbjct: 1   MSKGTVALAMSGGVDSSVSAYILKERGYDVIGIYMDLW-RDEREEYCNKSAAEDARRVAE 59

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           K        H++ +      +      +  +  +  N               F A   + 
Sbjct: 60  KLD---IPFHVINIEKKFKDNVIDYFIDEYLSGRTPNPC-VACNKTIKFEAFFNAAKEFG 115

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWK 182
                        + +G            +    +       +     P    KK    +
Sbjct: 116 ADFMATGHYCKIEERNGRKVIVKAEDDKKDQTYMMYNLKQYQLERTIMPCGEYKKDHIRE 175

Query: 183 LAQDIG 188
           +A+ IG
Sbjct: 176 IAESIG 181


>gi|307069664|ref|YP_003878141.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Zinderia insecticola CARI]
 gi|306482924|gb|ADM89795.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Zinderia insecticola CARI]
          Length = 365

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/193 (11%), Positives = 52/193 (26%), Gaps = 5/193 (2%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                +L  SGG DSS        +  +V  +       +           K+ ++ +  
Sbjct: 1   MKKKIILAMSGGIDSSITAWLLKKKGYKVIGIFMK--NWHFNNNSIFDSNCKEFLDALKI 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +    +  IL  +        +       K    N            F +      +++
Sbjct: 59  SEYLKIKIKILDFSKKYRKFIFNKFLKEYKKNNIPNPDILCNSIIKFKFFLNYCIKKFKI 118

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAIN---LGMESHVTVHTPLMWLKKYETWKL 183
            +      +    Y           +  + +     L  ++   +  PL  L K +  ++
Sbjct: 119 KLIATGHYLRIKKYKNKFFLLKALDKKKDQSYFLYSLNKKNISNIIFPLGDLNKKDIRRI 178

Query: 184 AQDIGGQDLVNLI 196
           A+ I   +     
Sbjct: 179 AKKIKFFNYNKKD 191


>gi|289672103|ref|ZP_06492993.1| thiamine biosynthesis protein ThiI [Pseudomonas syringae pv.
           syringae FF5]
          Length = 352

 Score = 58.0 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 57/183 (31%), Gaps = 29/183 (15%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWKD 69
           L+L SGG DS+      + R        F+ G R      +E    + KK          
Sbjct: 51  LVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAHELGVMEVAHFIWKKYG-------- 102

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     +    +  S   + V  +I      +        + L  A+ +A RL I 
Sbjct: 103 ----------SSQRVLFVSVPFEEVLGEILQKVDNSHMGVVLKRMMLRAASAVADRLEID 152

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G   +  +         I A    +         V  PL+   K +   LA +IG 
Sbjct: 153 VLVTGEAISQVASQTLPNLSLIDAATEKL---------VLRPLVATHKQDIVDLATEIGT 203

Query: 190 QDL 192
            D 
Sbjct: 204 ADF 206


>gi|240102817|ref|YP_002959126.1| GMP synthase subunit B [Thermococcus gammatolerans EJ3]
 gi|239910371|gb|ACS33262.1| GMP synthase [glutamine-hydrolyzing] pyrophosphatase subunit (C
           terminal domain) (guaA_C) [Thermococcus gammatolerans
           EJ3]
          Length = 311

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 60/185 (32%), Gaps = 25/185 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A++  SGG DSST    A     DR+  +  + G   K E E  +   +          
Sbjct: 25  KAIIALSGGVDSSTAAVLAHKAIGDRLHAVFVNTGFMRKGEPEFVVKTFR---------D 75

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +     H +  +     +   +T     +                +F+     +A  +  
Sbjct: 76  EFGLNLHYVDASERFFKALKGVTDPEEKR-----------KIIGRVFIEVFEEIAKEINA 124

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++        +         I++      L    ++ +  PL  L K E  +LA+++G
Sbjct: 125 DFLIQ----GTIAPDWIESKGKIKSHHNVGGLPERLNLKLIEPLRDLYKDEVRELAKELG 180

Query: 189 GQDLV 193
             + +
Sbjct: 181 LPEKI 185


>gi|205821554|sp|A8F172|MNMA_RICM5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 365

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 55/194 (28%), Gaps = 9/194 (4%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKK 59
           M ++  K  + ++  SGG DSS   +   ++   V  ++   Y     V  +   C  + 
Sbjct: 1   MINLGDKQSTIVVAMSGGVDSSAVAAMLHEQGHNVIGITLQLYDHGMAVGKKNACCAGQD 60

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           I +            ++L           S+  N          P   V     +     
Sbjct: 61  IYDAKMVANKLGIPHYVLD---YESKFKESVIDNFVDSYLQGETPLPCVRCNKSVKFRDL 117

Query: 120 ATLAYRLGITNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
              A  LG   +     V  +   + +                     E    +  PL  
Sbjct: 118 IKTARELGADKLATGHYVRKINGDNGAELYTGLDPAKDQSYFLFTTTKEQLEYLRFPLGG 177

Query: 175 LKKYETWKLAQDIG 188
           L K ET KLA   G
Sbjct: 178 LTKDETRKLASKFG 191


>gi|127513694|ref|YP_001094891.1| thiamine biosynthesis protein ThiI [Shewanella loihica PV-4]
 gi|189030650|sp|A3QGN4|THII_SHELP RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|126638989|gb|ABO24632.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
           loihica PV-4]
          Length = 485

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 63/196 (32%), Gaps = 27/196 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVEL 63
           +      L L SGG DS       + R  R     F+ G   +++           + ++
Sbjct: 176 MATQEDVLSLISGGFDSGVSSFQFIKRGSRTHYCFFNLGGDQHEIG----------VKQV 225

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                   GE H +          S     V  +I +             + +  A+ +A
Sbjct: 226 AYHLWQKYGESHKVKFI-------SVPFDPVVQEILEKIDNGQMGVILKRMMMRAASRIA 278

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            ++GI  +V G      S       + I      +         +  PL+ + K +   +
Sbjct: 279 EKMGIQALVTGEAMGQVSSQTLTNLNVIDRSTDML---------ILRPLIVMDKQDIINM 329

Query: 184 AQDIGGQDLVNLILEE 199
           +++IG +D    I E 
Sbjct: 330 SREIGTEDFAKSIPEY 345


>gi|51893527|ref|YP_076218.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Symbiobacterium thermophilum IAM 14863]
 gi|81388362|sp|Q67LS2|MNMA_SYMTH RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|51857216|dbj|BAD41374.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Symbiobacterium thermophilum IAM 14863]
          Length = 390

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 52/197 (26%), Gaps = 22/197 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--------QRNKVELECRLCVRKK 59
           A   L+  SGG DSS   +  +++   V  ++ +          Q N+    C L   + 
Sbjct: 27  AKRVLMAMSGGVDSSVAAALLVEQGYEVIGVTMNTWTDDIPEEIQMNQHSGCCSLAAVED 86

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
              +  K            +   G  + + +   +    +           R  +     
Sbjct: 87  ARSVAHKLGIPY-----YVMNFQGQFARTVIDYFIEEYTRGRTPNPCIACNR-YVKFSAF 140

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRH--------DTIRAIETAINLGMESHVTVHTP 171
              A +L    +  G                                NL  E+      P
Sbjct: 141 LEKAKQLECDYVATGHYAVIGQDDRFPGRWLLGKSADARKDQTYVLHNLTQEALAHTLFP 200

Query: 172 LMWLKKYETWKLAQDIG 188
           +  L+K E   LA   G
Sbjct: 201 VGHLQKSEVRALAAKYG 217


>gi|291296936|ref|YP_003508334.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Meiothermus ruber DSM 1279]
 gi|290471895|gb|ADD29314.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Meiothermus ruber DSM 1279]
          Length = 362

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 47/184 (25%), Gaps = 2/184 (1%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                L   SGG DSS   +    +   V      +   NK +     C          +
Sbjct: 1   MGKRVLAAMSGGVDSSVSAALLKQQGYEVIGAMMRFWPDNKKDDCFETCCSPDAAYEARR 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D +G      L    +     +        Q    PN  V     +        A  L
Sbjct: 61  VADIIGIP--FYLLDYREEFQEKIIDPFIAGYQQGETPNPCVNCNTRVKFDSLLKKARML 118

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   +  G    +  G                    E+   +  P+  L+K +   LA+ 
Sbjct: 119 GCDYVATGHYVINRDGGLYRGDPKKDQTYFLWGTPKEAIPHMLFPVGHLEKPQVRALAEQ 178

Query: 187 IGGQ 190
            G  
Sbjct: 179 FGLP 182


>gi|329298748|ref|ZP_08256084.1| tRNA s(4)U8 sulfurtransferase [Plautia stali symbiont]
          Length = 482

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 54/182 (29%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++       
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWQR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGRSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASMVAERYGVQT 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           ++ G      S         I      +         +  PL+   K     +A+ IG +
Sbjct: 284 LLTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIINIARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|12045233|ref|NP_073044.1| thiamine biosynthesis protein ThiI [Mycoplasma genitalium G37]
 gi|255660401|ref|ZP_05405810.1| thiamine biosynthesis protein ThiI [Mycoplasma genitalium G37]
 gi|1351561|sp|P47612|THII_MYCGE RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|3844960|gb|AAC71599.1| thiamine biosynthesis/tRNA modification protein ThiI [Mycoplasma
           genitalium G37]
 gi|166078795|gb|ABY79413.1| thiamine biosynthesis/tRNA modification protein ThiI [synthetic
           Mycoplasma genitalium JCVI-1.0]
          Length = 385

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 59/195 (30%), Gaps = 26/195 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  AL+L SGG DS    S  + R   ++ ++F        E        +KI  L    
Sbjct: 177 SGKALVLLSGGIDSPVAASLVMQRGFNIDFITF------INEPNKNQKTIEKITRLANLI 230

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +      +    L     +++ K +     ++         R ++        A    
Sbjct: 231 SFN----KTICSGKLLVFDFTAIQKELIHISNESY--------RIVLMRRVFYKAASMFK 278

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      +         I++              +  PL+   K +  +LA+  
Sbjct: 279 YDCLVTGEVLGQVASQTIENLKVIQSA--------TPDTFIVRPLIGFSKDKIIELAKFF 330

Query: 188 GGQDLVNLILEESHT 202
              D+      ++ +
Sbjct: 331 NTFDISIEQHLDTCS 345


>gi|330899022|gb|EGH30441.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas syringae pv. japonica
           str. M301072PT]
          Length = 317

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 57/183 (31%), Gaps = 29/183 (15%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWKD 69
           L+L SGG DS+      + R        F+ G R      +E    + KK          
Sbjct: 16  LVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAHELGVMEVAHFIWKKYG-------- 67

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     +    +  S   + V  +I      +        + L  A+ +A RL I 
Sbjct: 68  ----------SSQRVLFVSVPFEEVLGEILQKVDNSHMGVVLKRMMLRAASAVADRLEID 117

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G   +  +         I A    +         V  PL+   K +   LA +IG 
Sbjct: 118 VLVTGEAISQVASQTLPNLSLIDAATDKL---------VLRPLVATHKQDIVDLATEIGT 168

Query: 190 QDL 192
            D 
Sbjct: 169 ADF 171


>gi|291400046|ref|XP_002716320.1| PREDICTED: guanine monophosphate synthetase [Oryctolagus cuniculus]
          Length = 713

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 57/195 (29%), Gaps = 11/195 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        D+V  +  D G   K E +      KK+   +   
Sbjct: 258 KVLVLLSGGVDSTVCTALLNRALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 317

Query: 68  K-----DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP--NTFVPGRNIIFLVFAA 120
                  +      +           S T N+    ++      +TFV   N +      
Sbjct: 318 NAAHSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNL 377

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKY 178
                      +        S     + + I+       L         V  PL    K 
Sbjct: 378 KPEEVFLAQGTLRPDLIESASLIASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKD 437

Query: 179 ETWKLAQDIGGQDLV 193
           E   L +++G  + +
Sbjct: 438 EVRILGRELGLPEEL 452


>gi|210620567|ref|ZP_03292115.1| hypothetical protein CLOHIR_00058 [Clostridium hiranonis DSM 13275]
 gi|210155281|gb|EEA86287.1| hypothetical protein CLOHIR_00058 [Clostridium hiranonis DSM 13275]
          Length = 430

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 56/184 (30%), Gaps = 20/184 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +  +     ++  +  ++G   K E E  + + K  ++    +
Sbjct: 136 KKVLLALSGGVDSSVVAALLIKAIGKQLVCVHVNHGLMRKGESESVVEIFKNQMDANLIY 195

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D+           LG +   +  +     I    +       R +             G
Sbjct: 196 VDA-------EERFLGKLEGVADPEEKRKIIGAEFIRVFEEEARKL------------EG 236

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           +++      L  +    +  PL +L K E      ++
Sbjct: 237 IDFLAQGTIYPDIVESGTKTAKVVKSHHNVGGLPEDLGFELVEPLYYLFKDEVRACGVEL 296

Query: 188 GGQD 191
           G   
Sbjct: 297 GLPH 300


>gi|266623735|ref|ZP_06116670.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium hathewayi DSM 13479]
 gi|288864455|gb|EFC96753.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium hathewayi DSM 13479]
          Length = 369

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 54/193 (27%), Gaps = 11/193 (5%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D + K P  ++  SGG DSS       ++   V  ++    Q  + E++        +  
Sbjct: 9   DTMNK-PKVVVGMSGGVDSSVAAWLLKEQGYDVIGVTMQIWQDEETEVQEESGGCCGLSA 67

Query: 63  L--MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           +    +    LG  + +      +    ++      + ++   PN  +     +      
Sbjct: 68  VDDARRVAWDLGIPYYVM--NFKEEFRENVIDYFVDEYRNGRTPNPCIACNRYVKWESLL 125

Query: 121 TLAYRLGITNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
             +  +G   I  G                              NL          P+  
Sbjct: 126 KRSLDIGADYIATGHYARIEQLENGRYALKMSVTAAKDQTYALYNLTQYQLAHTLMPVGA 185

Query: 175 LKKYETWKLAQDI 187
             K +  ++A  I
Sbjct: 186 YSKDQIREIADRI 198


>gi|260914106|ref|ZP_05920579.1| thiamine biosynthesis protein ThiI [Pasteurella dagmatis ATCC
           43325]
 gi|260631739|gb|EEX49917.1| thiamine biosynthesis protein ThiI [Pasteurella dagmatis ATCC
           43325]
          Length = 480

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W+  
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWQRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + + V        L    V   + I        A R GI  
Sbjct: 232 SESHKVRFVAINFEGVVGEILEKVDNGQMGVVLKRMMVRAASRI--------AERFGIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I      +         V  PL+   K +   +A++IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDEASNCL---------VLRPLITHDKEQIIAMAKEIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|168239141|ref|ZP_02664199.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|194738212|ref|YP_002114241.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|194713714|gb|ACF92935.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197288113|gb|EDY27500.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
          Length = 368

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 54/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +     ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSENPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +             +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 LG E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRADVNGKSRLLRGLDGNKDQSYFLYTLGHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 177 QVRKIAEDLG 186


>gi|332214514|ref|XP_003256381.1| PREDICTED: GMP synthase [glutamine-hydrolyzing] isoform 2 [Nomascus
           leucogenys]
          Length = 594

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 57/195 (29%), Gaps = 11/195 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        D+V  +  D G   K E +      KK+   +   
Sbjct: 139 KVLVLLSGGVDSTVCTALLNRALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 198

Query: 68  K-----DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP--NTFVPGRNIIFLVFAA 120
                  +      +           S T N+    ++      +TFV   N +      
Sbjct: 199 NAAHSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNL 258

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKY 178
                      +        S     + + I+       L         V  PL    K 
Sbjct: 259 KPEEVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKD 318

Query: 179 ETWKLAQDIGGQDLV 193
           E   L +++G  + +
Sbjct: 319 EVRILGRELGLPEEL 333


>gi|332214512|ref|XP_003256380.1| PREDICTED: GMP synthase [glutamine-hydrolyzing] isoform 1 [Nomascus
           leucogenys]
          Length = 693

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 57/195 (29%), Gaps = 11/195 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        D+V  +  D G   K E +      KK+   +   
Sbjct: 238 KVLVLLSGGVDSTVCTALLNRALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 297

Query: 68  K-----DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP--NTFVPGRNIIFLVFAA 120
                  +      +           S T N+    ++      +TFV   N +      
Sbjct: 298 NAAHSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNL 357

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKY 178
                      +        S     + + I+       L         V  PL    K 
Sbjct: 358 KPEEVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKD 417

Query: 179 ETWKLAQDIGGQDLV 193
           E   L +++G  + +
Sbjct: 418 EVRILGRELGLPEEL 432


>gi|299131958|ref|ZP_07025153.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Afipia sp. 1NLS2]
 gi|298592095|gb|EFI52295.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Afipia sp. 1NLS2]
          Length = 393

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 49/184 (26%), Gaps = 10/184 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSST  +        V  ++   Y        +   C  + I +     +
Sbjct: 15  RVVVAMSGGVDSSTTAALLKAEGYDVIGITLQLYDHGAATHRKGACCAGQDIHDARDVAE 74

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L          S + +     +            R+ +      T A  LG 
Sbjct: 75  RIGIPHYVLDYE--SRFRESVIDRFAESYVLGETPVPCIECNRS-VKFRDLLTTARELGA 131

Query: 129 TNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
             +  G            R                     +    +  PL  + K +T +
Sbjct: 132 KALATGHYVASRRQADGSRAMVCAADADRDQSYFLFATTQDQLNDLRFPLGDMTKTQTRE 191

Query: 183 LAQD 186
           LA+ 
Sbjct: 192 LARR 195


>gi|297565299|ref|YP_003684271.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Meiothermus silvanus DSM 9946]
 gi|296849748|gb|ADH62763.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Meiothermus silvanus DSM 9946]
          Length = 371

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 47/187 (25%), Gaps = 2/187 (1%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           ++      L+  SGG DSS   +    +   V      +   NK +     C        
Sbjct: 1   MLVSKGRVLVAMSGGVDSSVSAALLKAQGYEVIGAMMRFWPDNKKDDCFETCCSPDAAYE 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
             +  D +G      L    +     +             PN  V     +        A
Sbjct: 61  ARRVADIVGVP--FYLLDYREEFQEKIIDPFIAGYAAGETPNPCVNCNTRVKFDSLLKKA 118

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             LG   +  G                            E+   +  P+  L+K +   +
Sbjct: 119 RMLGCDFVATGHYVIREGNALFRGDPKKDQTYFLWGTPKEAIPHMMFPVGHLEKPQVRAI 178

Query: 184 AQDIGGQ 190
           A+  G  
Sbjct: 179 AEQYGLP 185


>gi|149191014|ref|ZP_01869275.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio shilonii AK1]
 gi|148835148|gb|EDL52124.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio shilonii AK1]
          Length = 369

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 54/195 (27%), Gaps = 13/195 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +VE L     + +  E  C     + +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYC--TAAEDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +            H +      +   +     +A            +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIHLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDT-------IRAIETAINLGMESHVTVHTPLM 173
                L    I +G   +        +                   L  +       P+ 
Sbjct: 115 FADEVLDADYIAMGHYVSRTFPENGEKPQMLRGLDSNKDQSYFLYTLSHDQVARSLFPVG 174

Query: 174 WLKKYETWKLAQDIG 188
            L+K E  ++A++ G
Sbjct: 175 ELEKPEVRRIAEEQG 189


>gi|109048628|ref|XP_001105046.1| PREDICTED: GMP synthase [glutamine-hydrolyzing] isoform 1 [Macaca
           mulatta]
 gi|297286583|ref|XP_002803006.1| PREDICTED: GMP synthase [glutamine-hydrolyzing] isoform 2 [Macaca
           mulatta]
          Length = 693

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 57/195 (29%), Gaps = 11/195 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        D+V  +  D G   K E +      KK+   +   
Sbjct: 238 KVLVLLSGGVDSTVCTALLNRALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 297

Query: 68  K-----DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP--NTFVPGRNIIFLVFAA 120
                  +      +           S T N+    ++      +TFV   N +      
Sbjct: 298 NAAHSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNL 357

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKY 178
                      +        S     + + I+       L         V  PL    K 
Sbjct: 358 KPEEVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKD 417

Query: 179 ETWKLAQDIGGQDLV 193
           E   L +++G  + +
Sbjct: 418 EVRILGRELGLPEEL 432


>gi|332716432|ref|YP_004443898.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
           [Agrobacterium sp. H13-3]
 gi|325063117|gb|ADY66807.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
           [Agrobacterium sp. H13-3]
          Length = 402

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 50/190 (26%), Gaps = 14/190 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS            V  ++   Y     V      C  + I +     +
Sbjct: 18  RIVVAMSGGVDSSVVAGILKREGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 77

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++    A        P   V     +        A  LG 
Sbjct: 78  TLGIPHYVLD---YEARFRETVINPFAEAYAMGETPIPCVACNQTVKFADLLATAQELGA 134

Query: 129 TNI----VIGVCETDYSGYPDCRHDT------IRAIETAINLGMESHVTVHTPLMWLKKY 178
             +     I       +G P  R                     E    +  PL  L K 
Sbjct: 135 DALATGHYIRSRPNPVAGQPGRRALYRPIDSDRDQSWFLFATTQEQIDYLRFPLGGLSKA 194

Query: 179 ETWKLAQDIG 188
           ET  LA+D+G
Sbjct: 195 ETRALAEDMG 204


>gi|311105115|ref|YP_003977968.1| methyltransferase [Achromobacter xylosoxidans A8]
 gi|310759804|gb|ADP15253.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Achromobacter xylosoxidans A8]
          Length = 372

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 47/198 (23%), Gaps = 15/198 (7%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN    K    ++  SGG DSS        +   V  L     + +     C     + +
Sbjct: 1   MNQKSTKKGRVVVGMSGGVDSSVTAWLLKQQGYEVVGLFMKNWEDDDDSEYCSTR--QDL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           ++          E   +            +      +      PN  V     I      
Sbjct: 59  LDAASVADLVGVEFEFVN---FAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFL 115

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTI----------RAIETAINLGMESHVTVHT 170
             A  LG  +I  G                                   L          
Sbjct: 116 DHAMALGAEHIATGHYARVREVPAVGGGTQFQLLKALDASKDQSYFLHRLNQAQLSRTMF 175

Query: 171 PLMWLKKYETWKLAQDIG 188
           PL  + K E  ++A +IG
Sbjct: 176 PLGEIHKTEVRRIAHEIG 193


>gi|332521153|ref|ZP_08397611.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lacinutrix algicola 5H-3-7-4]
 gi|332043246|gb|EGI79443.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lacinutrix algicola 5H-3-7-4]
          Length = 396

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 35/138 (25%), Gaps = 3/138 (2%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS       ++   V  L       + V +           + M  
Sbjct: 1   MKKRVIVGLSGGVDSSVAAYLLKEQGYEVIGLFMKNWHDDSVTISDECPWLDDSNDAMLV 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +        +    L +     +   +  + +    PN  V     I       +A  L
Sbjct: 61  AEKLGIPFQTVD---LSEQYKERIVDYMFNEYEKGRTPNPDVLCNREIKFDVFMKIALDL 117

Query: 127 GITNIVIGVCETDYSGYP 144
           G   +  G          
Sbjct: 118 GADYVATGHYCRKGIIEK 135


>gi|213609353|ref|ZP_03369179.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 300

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 56/179 (31%), Gaps = 25/179 (13%)

Query: 14  LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
           + SGG DSS      + R  RV    F+ G            +   + ++     +  G 
Sbjct: 1   MISGGFDSSVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNRFGS 51

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
            H +    +         + V  +I +             + +  A+ +A R G+  +V 
Sbjct: 52  SHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQALVT 104

Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
           G      S         I  +   +         +  PL+   K     LA+ IG +D 
Sbjct: 105 GEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTEDF 154


>gi|161503672|ref|YP_001570784.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865019|gb|ABX21642.1| hypothetical protein SARI_01756 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 383

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 54/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +     ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 16  MSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 73

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +             +  + I F  F    A
Sbjct: 74  QAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAA 131

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 LG E       P+  L+K 
Sbjct: 132 EDLGADYIATGHYVRRVDINGKSRLLRGLDGNKDQSYFLYTLGHEQIAQSLFPVGELEKP 191

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 192 QVRKIAEDLG 201


>gi|15834848|ref|NP_296607.1| MesJ/Ycf62 family protein [Chlamydia muridarum Nigg]
 gi|270285014|ref|ZP_06194408.1| MesJ/Ycf62 family protein [Chlamydia muridarum Nigg]
 gi|301336412|ref|ZP_07224614.1| tRNA(Ile)-lysidine synthase [Chlamydia muridarum MopnTet14]
 gi|61216745|sp|Q9PL79|TILS_CHLMU RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|7190268|gb|AAF39100.1| MesJ/Ycf62 family protein [Chlamydia muridarum Nigg]
          Length = 321

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 46/178 (25%), Gaps = 22/178 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K    LL  SGG DS   +     R      +  DYG R     E          +L 
Sbjct: 19  LDKKKKYLLALSGGSDSLLLMYLLRSRGISFTAVHVDYGWRETSYQEA--------CDLA 70

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +       +    +   +  S +         +             +FL   A    
Sbjct: 71  SLCEREQIPFILDRQEVANPMDFSDIENIARQYRYELFYRLCKERLFAGVFLGHHADDQA 130

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              +  +  G    +  G                  G    +T+  PL+ + K +  +
Sbjct: 131 ETILKRVFEGAHLGNLKG--------------MARYGTYKGITLLRPLLHITKRQIVE 174


>gi|328955610|ref|YP_004372943.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Coriobacterium glomerans PW2]
 gi|328455934|gb|AEB07128.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Coriobacterium glomerans PW2]
          Length = 415

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 49/184 (26%), Gaps = 25/184 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L S G DS         R      + F    R +         +  I    P    
Sbjct: 179 KVVTLLSSGIDSPVATWLLSRRGAVCVPVHFS--GRPQTAASSEDLCQDIISAYAPAI-- 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G  +++           +    +             +  R +  L     +A   G  
Sbjct: 235 QIGRLYVVAFGDCQRAISLACPSAL----------RVIMYRRMMYALA--ERVARIEGAR 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      +          + +E    +     + V  PL+   K E    AQ IG 
Sbjct: 283 ALVTGESLGQVAS---------QTLENIQAVDDVVSIPVLRPLIGSDKQEIIDRAQAIGT 333

Query: 190 QDLV 193
            D+ 
Sbjct: 334 FDIS 337


>gi|269138338|ref|YP_003295038.1| thiamine biosynthesis ATP pyrophosphatase [Edwardsiella tarda
           EIB202]
 gi|267983998|gb|ACY83827.1| thiamine biosynthesis ATP pyrophosphatase [Edwardsiella tarda
           EIB202]
 gi|304558370|gb|ADM41034.1| Thiamine biosynthesis protein ThiI [Edwardsiella tarda FL6-60]
          Length = 482

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------SAHEI--GVKQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +           V  +I +             + +  A+ +A R GI  
Sbjct: 231 FGSSHRVRFVAI-------DFAPVVGEILEKVDDGQMGVVLKRMMVRAASRVAERYGIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         V  PL+   K    +LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDGVSDTL---------VLRPLIAHDKEHIIRLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|187933232|ref|YP_001885369.1| tRNA-specific 2-thiouridylase MnmA [Clostridium botulinum B str.
           Eklund 17B]
 gi|205813703|sp|B2THM7|MNMA_CLOBB RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|187721385|gb|ACD22606.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum B str. Eklund 17B]
          Length = 361

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 50/199 (25%), Gaps = 10/199 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVELMP 65
               L+  SGG DSS       ++   V   +    Q +K   E     C    + +   
Sbjct: 5   KKKVLVGMSGGVDSSVAAYLLKEQGYEVIGATMQIWQEDKEVEEREGGCCSLSAVEDARR 64

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    ++L      D     + +    +  D   PN  +     +        A  
Sbjct: 65  VCDKLDIPFYVLN---FRDSFKKKVIEPFIQEYIDGRTPNPCIECNKHLKFDELLRKAQG 121

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH-----TPLMWLKKYET 180
           +G+  I  G                           + +           P     K   
Sbjct: 122 IGVDYIATGHYAKIDKKDDRYMLIRSDDDRKDQTYALYNFTQDQLAHTLMPCGEYTKDRI 181

Query: 181 WKLAQDIGGQDLVNLILEE 199
            ++A++IG         EE
Sbjct: 182 REIAKEIGLAVHNKKDSEE 200


>gi|326390151|ref|ZP_08211712.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacter ethanolicus JW 200]
 gi|325993799|gb|EGD52230.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacter ethanolicus JW 200]
          Length = 364

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 50/193 (25%), Gaps = 13/193 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV--- 61
           ++      +  SGG DSS            V  L+      ++ +          +    
Sbjct: 1   MEINNRVAIGMSGGVDSSVAAYLLKKEGFDVIGLTMKVWVDHEAKAFDSDKSCCSLRATQ 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +     +      + +      ++ +  +      +      PN  V     I       
Sbjct: 61  DAKKVAEMLGVPHYTVD---FSEVFYDKIVNYFINEYLKGRTPNPCVLCNRQIKFGELLE 117

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMW 174
            A+ LG   I  G            R+        +         L  +       PL  
Sbjct: 118 KAFELGAYYIATGHYVRKDYDEKTKRYLLKKGIDSSKDQSYVLYRLTQKQLEHALFPLGN 177

Query: 175 LKKYETWKLAQDI 187
            KK E   LA+++
Sbjct: 178 YKKEEIRALAEEL 190


>gi|193216582|ref|YP_001999824.1| tRNA-specific 2-thiouridylase MnmA [Mycoplasma arthritidis 158L3-1]
 gi|229486415|sp|B3PM68|MNMA_MYCA5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|193001905|gb|ACF07120.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycoplasma arthritidis 158L3-1]
          Length = 370

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 53/188 (28%), Gaps = 7/188 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMP 65
            A   +L  SGG DSS C      +   V  L   ++      +      + + +     
Sbjct: 1   MAKRVVLGMSGGVDSSVCAYLLQQQGYEVVGLFMRNWDSFLNNDFLGNEAISQDVCPQEQ 60

Query: 66  KWKD-----SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            + D           +  +  + +      +  +                + I F  FA 
Sbjct: 61  DYADAKEVAKQLNIPLYRVDFIKEYWDHVFSYLIEEYKIGRTPNPDIFCNKYIKFNFFAQ 120

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDT-IRAIETAINLGMESHVTVHTPLMWLKKYE 179
               +     I +G      +G      D           L  E    V  PL  L K E
Sbjct: 121 VAFSKYQADFIAMGHYAYCENGELFKAKDDSKDQSYFLAQLSNEQLKKVIFPLANLTKQE 180

Query: 180 TWKLAQDI 187
             ++A+++
Sbjct: 181 VREIAKNL 188


>gi|262274515|ref|ZP_06052326.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Grimontia hollisae CIP 101886]
 gi|262221078|gb|EEY72392.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Grimontia hollisae CIP 101886]
          Length = 370

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 53/196 (27%), Gaps = 14/196 (7%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D    +   ++  SGG DSS        +  +VE L     + +  +  C     + +
Sbjct: 1   MSD--NSSKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNDEYCS--AAEDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +            H +      +   +     +             +  + I F  F  
Sbjct: 57  ADAQAVCDKLEIPLHTIN--FAAEYWDNVFEHFLTEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTI--------RAIETAINLGMESHVTVHTPL 172
                L    I +G                +                L  +       P+
Sbjct: 115 FADEVLEADYIAMGHYVRRTFPTKTGEKAQMLRGLDSNKDQSYFLYTLSHDQVARSLFPV 174

Query: 173 MWLKKYETWKLAQDIG 188
             L+K E  ++A++ G
Sbjct: 175 GDLEKPEVRRIAEEQG 190


>gi|205822040|sp|A9MG80|MNMA_SALAR RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 368

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 54/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +     ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +             +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 LG E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRVDINGKSRLLRGLDGNKDQSYFLYTLGHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 177 QVRKIAEDLG 186


>gi|170755772|ref|YP_001782543.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum B1 str. Okra]
 gi|205810298|sp|B1ILH4|MNMA1_CLOBK RecName: Full=tRNA-specific 2-thiouridylase mnmA 1
 gi|169120984|gb|ACA44820.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum B1 str. Okra]
          Length = 353

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 52/188 (27%), Gaps = 11/188 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K   AL + SGG DSS       +R   V  +  D   R++ E  C     +    + 
Sbjct: 1   MSKGTVALAM-SGGVDSSVSAYILKERGYDVIGIYMDLW-RDEREEYCNKSAAEDARRVA 58

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN-IIFLVFAATLA 123
            K        H++ +        + +   +   +            R       F A   
Sbjct: 59  EKLD---IPFHVINIE--KKFKDNVIDYFIDEYLSGRTPNPCVACNRTIKFEAFFNAAKE 113

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYET 180
           +              + +G            +    +       +     P    KK   
Sbjct: 114 FGADFMATGHYCKIEERNGRKVIVKAEDDKKDQTYMMYNLKQYQLERTIMPCGEYKKDYI 173

Query: 181 WKLAQDIG 188
            ++A++IG
Sbjct: 174 REIAENIG 181


>gi|126338491|ref|XP_001372324.1| PREDICTED: similar to guanosine 5-monophosphate synthetase
           [Monodelphis domestica]
          Length = 815

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 57/195 (29%), Gaps = 11/195 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        D+V  +  D G   K E +      +K+   +   
Sbjct: 360 KVLVLLSGGVDSTVCTALLNRALDQDQVIAVHIDNGFMRKRESQSVEEALRKLGIQVKVV 419

Query: 68  K-----DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP--NTFVPGRNIIFLVFAA 120
                  +      +           S T N+    ++      +TFV   N +      
Sbjct: 420 NAAHSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNL 479

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKY 178
                      +        S     + + I+       L         V  PL    K 
Sbjct: 480 RPEEVFLAQGTLRPDLIESASLVASGKAEVIKTHHNDTELIRKLREEGKVIEPLKDFHKD 539

Query: 179 ETWKLAQDIGGQDLV 193
           E   L +++G  + +
Sbjct: 540 EVRILGRELGLPEEL 554


>gi|66048040|ref|YP_237881.1| thiamine biosynthesis protein ThiI [Pseudomonas syringae pv.
           syringae B728a]
 gi|75500200|sp|Q4ZLX9|THII_PSEU2 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|63258747|gb|AAY39843.1| Thiamine biosynthesis protein [Pseudomonas syringae pv. syringae
           B728a]
          Length = 484

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 57/183 (31%), Gaps = 29/183 (15%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWKD 69
           L+L SGG DS+      + R        F+ G R      +E    + KK          
Sbjct: 183 LVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAHELGVMEVAHFIWKKYG-------- 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     +    +  S   + V  +I      +        + L  A+ +A RL I 
Sbjct: 235 ----------SSQRVLFVSVPFEEVLGEILQKVDNSHMGVVLKRMMLRAASAVADRLEID 284

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G   +  +         I A    +         V  PL+   K +   LA +IG 
Sbjct: 285 VLVTGEAISQVASQTLPNLSLIDAATDKL---------VLRPLVATHKQDIVDLATEIGT 335

Query: 190 QDL 192
            D 
Sbjct: 336 ADF 338


>gi|322807224|emb|CBZ04798.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum H04402 065]
          Length = 353

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 50/186 (26%), Gaps = 9/186 (4%)

Query: 7   KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
            +   + L  SGG DSS       +R   V  +  D   R++ E  C     +    +  
Sbjct: 1   MSKGTVALAMSGGVDSSVSAYILKERGYDVIGIYMDLW-RDEREEYCNKSAAEDARRVAE 59

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           K        H++ +      +      +  +  +  N               F A   + 
Sbjct: 60  KLD---IPFHVINIEKKFKDNVIDYFIDEYLSGRTPNPC-VACNKTIKFEAFFNAAKEFG 115

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWK 182
                        + +G            +    +       +     P    KK    +
Sbjct: 116 ADFMATGHYCKIEERNGRKVIVKAEDDKKDQTYMMYNLKQYQLERTIMPCGEYKKDHIRE 175

Query: 183 LAQDIG 188
           +A++IG
Sbjct: 176 IAENIG 181


>gi|157962804|ref|YP_001502838.1| thiamine biosynthesis protein ThiI [Shewanella pealeana ATCC
           700345]
 gi|189030651|sp|A8H6W6|THII_SHEPA RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|157847804|gb|ABV88303.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
           pealeana ATCC 700345]
          Length = 484

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 61/196 (31%), Gaps = 27/196 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVEL 63
           +      L L SGG DS       + R  R     F+ G   +++           + ++
Sbjct: 176 MATQEDVLSLISGGFDSGVSSYQFIKRGSRTHYCFFNLGGDQHEIG----------VKQV 225

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                   GE H +          S     V  +I +             + +  A  +A
Sbjct: 226 AYHLWQKYGESHKVKFI-------SVPFDPVVQEILERIDNGQMGVILKRMMMRAATRVA 278

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            ++GI  +V G      S       + I      +         +  PL+ + K +   +
Sbjct: 279 QKMGIQALVTGEAMGQVSSQTLTNLNVIDRCTEQL---------ILRPLIAMDKQDIINI 329

Query: 184 AQDIGGQDLVNLILEE 199
           ++ IG +D    I E 
Sbjct: 330 SRQIGTEDFAKSIPEY 345


>gi|78776909|ref|YP_393224.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sulfurimonas denitrificans DSM 1251]
 gi|123550559|sp|Q30SP2|MNMA_SULDN RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|78497449|gb|ABB43989.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sulfurimonas denitrificans DSM 1251]
          Length = 341

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 60/198 (30%), Gaps = 17/198 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR---NKVELECRLCVRKKIVEL 63
            +   LL  SGG DS+    +  +    VE L          +++           +   
Sbjct: 1   MSKKVLLGMSGGVDSTVSAMFLKEEGYEVEGLYMKLHSNPGYHEIHEARARKAADFLG-- 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    + H++    L +I +  + K           PN        +        A
Sbjct: 59  --------IKLHVID---LQEIFNEKVFKPFVDTYAKGKTPNPCALCNRSLKFGEMLKFA 107

Query: 124 YRLGITNIVIGVC-ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           Y++G   +  G   +TD   + +   DT         +  E    +  PL   KK E  +
Sbjct: 108 YKIGADFVATGHYIKTDGKYFYEADDDTKDQSYFLFYVNKEILPRLLFPLGDRKKSEIKE 167

Query: 183 LAQDIGGQDLVNLILEES 200
           LA  I G        E S
Sbjct: 168 LAASINGLATFASQRESS 185


>gi|157813158|gb|ABV81324.1| putative GMP synthetase [Cydia pomonella]
          Length = 194

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 28/71 (39%), Gaps = 2/71 (2%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKK 59
            D +  +   L+L SGG DS+ C +      R D+V  L  D G   K E        ++
Sbjct: 38  RDAVGDSNKVLVLVSGGVDSTVCAALLRTALREDQVIALHIDNGFMRKNESSKVERCLRE 97

Query: 60  IVELMPKWKDS 70
           +   +     S
Sbjct: 98  LGVRLHVVNAS 108


>gi|302189385|ref|ZP_07266058.1| thiamine biosynthesis protein ThiI [Pseudomonas syringae pv.
           syringae 642]
          Length = 484

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 57/183 (31%), Gaps = 29/183 (15%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWKD 69
           L+L SGG DS+      + R        F+ G R      +E    + KK          
Sbjct: 183 LVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAHELGVMEVAHFIWKKYG-------- 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     +    +  S   + V  +I      +        + L  A+ +A RL I 
Sbjct: 235 ----------SSQRVLFVSVPFEEVLGEILQKVDNSHMGVVLKRMMLRAASAVADRLEID 284

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G   +  +         I A    +         V  PL+   K +   LA +IG 
Sbjct: 285 VLVTGEAISQVASQTLPNLSLIDAATDKL---------VLRPLVATHKQDIVDLATEIGT 335

Query: 190 QDL 192
            D 
Sbjct: 336 ADF 338


>gi|296227744|ref|XP_002759511.1| PREDICTED: GMP synthase [glutamine-hydrolyzing] [Callithrix
           jacchus]
          Length = 693

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 57/195 (29%), Gaps = 11/195 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        D+V  +  D G   K E +      KK+   +   
Sbjct: 238 KVLVLLSGGVDSTVCTALLNRALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 297

Query: 68  K-----DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP--NTFVPGRNIIFLVFAA 120
                  +      +           S T N+    ++      +TFV   + +      
Sbjct: 298 NAAHSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIASEVIGEMNL 357

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKY 178
                      +        S     + + I+       L         V  PL    K 
Sbjct: 358 KPEEVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGRVIEPLKDFHKD 417

Query: 179 ETWKLAQDIGGQDLV 193
           E   L +++G  + +
Sbjct: 418 EVRILGRELGLPEEL 432


>gi|62179036|ref|YP_215453.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|81309775|sp|Q57SD9|THII_SALCH RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|62126669|gb|AAX64372.1| exonuclease VII, small subunit [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|322713497|gb|EFZ05068.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 482

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKGHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|114563431|ref|YP_750944.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shewanella frigidimarina NCIMB 400]
 gi|122299537|sp|Q081F9|MNMA_SHEFN RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|114334724|gb|ABI72106.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shewanella frigidimarina NCIMB 400]
          Length = 372

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 50/189 (26%), Gaps = 10/189 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS      + +   VE L     + +  +  C       + +   
Sbjct: 8   SNGKKVIVGMSGGVDSSVSAYLLMQQGFEVEGLFMKNWEEDDTDEYCA--AADDLKDAQA 65

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  + H +      +   +     +A            +  + I F  F       
Sbjct: 66  VCDKLGIKMHTVN--FAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFADDI 123

Query: 126 LGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           L    I +G                               L  E       P+  L+K++
Sbjct: 124 LDADYIAMGHYVRRRDNSDGSVEMLRGVDGNKDQSYFLYTLSHEQVARSLFPVGELEKHQ 183

Query: 180 TWKLAQDIG 188
             ++AQ +G
Sbjct: 184 VREIAQKLG 192


>gi|328473137|gb|EGF43985.1| tRNA-specific 2-thiouridylase MnmA [Vibrio parahaemolyticus 10329]
          Length = 374

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 53/195 (27%), Gaps = 13/195 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +VE L     + +  E  C     + +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYC--TAAEDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +            H +      +   +     +A            +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIHLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDT-------IRAIETAINLGMESHVTVHTPLM 173
                L    I +G            +                   L  E       P+ 
Sbjct: 115 FADEVLEADYIAMGHYVRRSFPENGEKPQMLRGLDSNKDQSYFLYTLSHEQVARSLFPVG 174

Query: 174 WLKKYETWKLAQDIG 188
            L+K E  ++A++ G
Sbjct: 175 DLEKPEVRRIAEEQG 189


>gi|221134862|ref|ZP_03561165.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Glaciecola sp. HTCC2999]
          Length = 372

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 52/184 (28%), Gaps = 9/184 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS        +  +VE +     + +  +  C     + + +       
Sbjct: 13  KVIVGMSGGVDSSVSAYLLKQQGFQVEGVFMKNWEEDDNDEYCA--AAEDLADAHAVADK 70

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                H +      +   +     +A            +  + I F  F    A  LG  
Sbjct: 71  LGITLHSIN--FAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEYAAEDLGAD 128

Query: 130 NIVIGVCETDYSGYP---DCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYETWKLA 184
            I  G   +           R       ++     L  E       P+  L+K    ++A
Sbjct: 129 YIATGHYVSRAKNGDKWEMLRGFDQNKDQSYFLYTLSHEHIAKTLFPIGHLEKPTVREIA 188

Query: 185 QDIG 188
           +  G
Sbjct: 189 EAQG 192


>gi|323965106|gb|EGB60565.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli M863]
 gi|327254745|gb|EGE66361.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli STEC_7v]
          Length = 482

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|312116059|ref|YP_004013655.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhodomicrobium vannielii ATCC 17100]
 gi|311221188|gb|ADP72556.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhodomicrobium vannielii ATCC 17100]
          Length = 395

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 47/184 (25%), Gaps = 9/184 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +           ++   Y     +  +   C  + I++      
Sbjct: 34  RIVVAMSGGVDSSLTAALVKRAGYDTVGITLQLYDHGEAMARKGACCAGQDIMDARGVAD 93

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           S+  + A        P   V     +        A  LG 
Sbjct: 94  RLGVPHYVLDYED---RFRQSVIDDFADSYLAGETPVPCVRCNQTVKFRDLLGAARELGA 150

Query: 129 TNIVIGVC-----ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           + +V G                                      +  PL  + K ET ++
Sbjct: 151 SALVTGHYVRSVPGPRGIEMHQAADPDRDQSYFLFATTQAQLDFLRFPLGGMTKTETREM 210

Query: 184 AQDI 187
           A  +
Sbjct: 211 AAAL 214


>gi|238754215|ref|ZP_04615572.1| Thiamine biosynthesis protein thiI [Yersinia ruckeri ATCC 29473]
 gi|238707462|gb|EEP99822.1| Thiamine biosynthesis protein thiI [Yersinia ruckeri ATCC 29473]
          Length = 536

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 234 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------SAHEI--GVKQVAHYLWNR 284

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 285 FGRSHKVRFVAI-------DFEPVVGEILEKVEDGQMGVVLKRMMVRAASQIAERYGVQA 337

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K     LA++IG +
Sbjct: 338 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIINLAREIGTE 388

Query: 191 DL 192
           D 
Sbjct: 389 DF 390


>gi|269119363|ref|YP_003307540.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Sebaldella termitidis ATCC 33386]
 gi|268613241|gb|ACZ07609.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Sebaldella termitidis ATCC 33386]
          Length = 353

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 52/185 (28%), Gaps = 6/185 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL-ECRLCVRKKIVELMP 65
                ++  SGG DSS    +   +   V  ++  +      E      C    I +   
Sbjct: 1   MKTKVIVGMSGGVDSSAAALFLKKQGYEVIGITLKHLPDELSENGGKTCCSIDDITDAKN 60

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    + + ++   +     +         +   P+  V     I +   A +A +
Sbjct: 61  VCSHLEIPHYTIDVS---EEFKKEVMDYFIKMYNEGKTPSPCVICDEKIKIKKLAEIADK 117

Query: 126 LGITNIVIGVCETDYSGYP--DCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           +G   I  G              R +T         L       +  PL    K E  ++
Sbjct: 118 MGAEYIATGHYSGKTLENKLIWDRENTKDQTYMLYRLDTGILSRMLFPLSGYNKKEIREI 177

Query: 184 AQDIG 188
            ++ G
Sbjct: 178 VKEAG 182


>gi|108756833|ref|YP_631693.1| tRNA-specific 2-thiouridylase MnmA [Myxococcus xanthus DK 1622]
 gi|123374481|sp|Q1D6N0|MNMA_MYXXD RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|108460713|gb|ABF85898.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Myxococcus xanthus DK 1622]
          Length = 348

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 50/183 (27%), Gaps = 7/183 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS   +   ++   V  ++               C    I +     + 
Sbjct: 2   RVVVAMSGGVDSSAAAALLKEQGHEVIGITLRVWSYEGKATCGSCCSPDDIDDARAVAQT 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                ++   A   +I    +             P   V     +   F    A  LG  
Sbjct: 62  LGIPFYV---ANAEEIFQDRVINPFVQSYLGGRTPIPCVACNRDVKFNFLLKRARALGAR 118

Query: 130 -NIVIGVCETDYSGYPDCRHDTIRAIETAIN---LGMESHVTVHTPLMWLKKYETWKLAQ 185
                     +  G    R     A + +     LG +    +  P+  + K E   +A+
Sbjct: 119 LATGHYARVEEVDGRFVLRRAVDAAKDQSYFLFTLGQDELRDILFPVGGMTKAEVRAVAE 178

Query: 186 DIG 188
             G
Sbjct: 179 RHG 181


>gi|153838264|ref|ZP_01990931.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio parahaemolyticus AQ3810]
 gi|161511058|ref|NP_797509.2| tRNA-specific 2-thiouridylase MnmA [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260364461|ref|ZP_05777086.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio parahaemolyticus K5030]
 gi|260877061|ref|ZP_05889416.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio parahaemolyticus AN-5034]
 gi|260896850|ref|ZP_05905346.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio parahaemolyticus Peru-466]
 gi|260902426|ref|ZP_05910821.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio parahaemolyticus AQ4037]
 gi|32130287|sp|Q87QL9|MNMA_VIBPA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|149748319|gb|EDM59178.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio parahaemolyticus AQ3810]
 gi|308087006|gb|EFO36701.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio parahaemolyticus Peru-466]
 gi|308093683|gb|EFO43378.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio parahaemolyticus AN-5034]
 gi|308110639|gb|EFO48179.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio parahaemolyticus AQ4037]
 gi|308114601|gb|EFO52141.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio parahaemolyticus K5030]
          Length = 374

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 53/195 (27%), Gaps = 13/195 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +VE L     + +  E  C     + +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYC--TAAEDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +            H +      +   +     +A            +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIHLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDT-------IRAIETAINLGMESHVTVHTPLM 173
                L    I +G            +                   L  E       P+ 
Sbjct: 115 FADEVLEADYIAMGHYVRRSFPENGEKPQMLRGLDSNKDQSYFLYTLSHEQVARSLFPVG 174

Query: 174 WLKKYETWKLAQDIG 188
            L+K E  ++A++ G
Sbjct: 175 DLEKPEVRRIAEEQG 189


>gi|330961945|gb|EGH62205.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 484

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 57/183 (31%), Gaps = 29/183 (15%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWKD 69
           L+L SGG DS+      + R        F+ G R      +E    + KK          
Sbjct: 183 LVLMSGGFDSTVAAYQVMRRGLMAHFCFFNLGGRAHELGVMEVAHFIWKKYG-------- 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     +    +  S   + V  +I      +        + L  A+ +A RL I 
Sbjct: 235 ----------SSQRVLFVSVPFEEVLGEILQKVDNSHMGVVLKRMMLRAASAVADRLEID 284

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G   +  +         I A    +         V  PL+   K +   LA +IG 
Sbjct: 285 VLVTGEAISQVASQTLPNLSLIDAATDKL---------VLRPLVATHKQDIVDLATEIGT 335

Query: 190 QDL 192
            D 
Sbjct: 336 ADF 338


>gi|325981798|ref|YP_004294200.1| argininosuccinate synthase [Nitrosomonas sp. AL212]
 gi|325531317|gb|ADZ26038.1| argininosuccinate synthase [Nitrosomonas sp. AL212]
          Length = 404

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 53/157 (33%), Gaps = 7/157 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +KK   A+L FSGG D+S  L W  D +   V T + D GQ  +VE        K++  +
Sbjct: 1   MKKINKAVLAFSGGLDTSVILKWLQDTYQCEVVTFTADIGQGEEVEP--ARAKAKQLG-V 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + D L E+ +            + T      +   ++    +  R I         A
Sbjct: 58  KEIYIDDLREEFVRDFVF---PMFRANTIYEGEYLLGTSIARPLIAKRQIEIAKETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         +   Y       + A     NL
Sbjct: 115 VSHGATGKGNDQVRFELGYYALQPDIQVIAPWREWNL 151


>gi|197099468|ref|NP_001124563.1| GMP synthase [glutamine-hydrolyzing] [Pongo abelii]
 gi|75041859|sp|Q5RA96|GUAA_PONAB RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|55729155|emb|CAH91314.1| hypothetical protein [Pongo abelii]
          Length = 693

 Score = 57.6 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 55/195 (28%), Gaps = 11/195 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        ++V  +  D G   K E +      KK+   +   
Sbjct: 238 KVLVLLSGGVDSTVCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 297

Query: 68  -KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                  +    L I  +        +  + +  +      + G   + +         L
Sbjct: 298 NAAHSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMSL 357

Query: 127 GITNIV--------IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
               +           +                   +T +   +     V  PL    K 
Sbjct: 358 KPEEVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKD 417

Query: 179 ETWKLAQDIGGQDLV 193
           E   L +++G  + +
Sbjct: 418 EVRILGRELGLPEEL 432


>gi|332098574|gb|EGJ03540.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
           boydii 3594-74]
          Length = 476

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 174 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 224

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 225 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 277

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 278 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 328

Query: 191 DL 192
           D 
Sbjct: 329 DF 330


>gi|332094578|gb|EGI99624.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
           boydii 5216-82]
          Length = 482

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|332085601|gb|EGI90765.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
           dysenteriae 155-74]
          Length = 476

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 174 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 224

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 225 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 277

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 278 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 328

Query: 191 DL 192
           D 
Sbjct: 329 DF 330


>gi|331000512|ref|ZP_08324184.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Parasutterella excrementihominis YIT 11859]
 gi|329571476|gb|EGG53161.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Parasutterella excrementihominis YIT 11859]
          Length = 388

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 51/190 (26%), Gaps = 10/190 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +  + ++  SGG DS+        +   V  L     + +     C     + +++    
Sbjct: 29  ETKTVVVGLSGGVDSAVSAYLLKKQGYEVIGLFMKNWEDDDDSEYCSSR--QDLIDATAV 86

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 +   +            +      +      PN  V   + I        A RL
Sbjct: 87  ADVIGID---IEAVNFAKEYKDRVFAEFLSEYSAGRTPNPDVLCNSEIKFKAFLDHAIRL 143

Query: 127 GITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           G   I  G                   +T         L          P+  + K E  
Sbjct: 144 GADKIATGHYARVRERDGLFELLKGVDNTKDQSYFLNRLNQYQLSKAMFPVGDMCKTEVR 203

Query: 182 KLAQDIGGQD 191
           ++A++IG  +
Sbjct: 204 RIAEEIGLPN 213


>gi|325498294|gb|EGC96153.1| tRNA s(4)U8 sulfurtransferase [Escherichia fergusonii ECD227]
          Length = 482

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|324114642|gb|EGC08610.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           fergusonii B253]
          Length = 482

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|323976096|gb|EGB71189.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli TW10509]
          Length = 482

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|323214164|gb|EFZ98924.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
          Length = 230

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 54/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +     ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +             +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 LG E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRADVNGKSRLLRGLDGNKDQSYFLYTLGHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 177 QVRKIAEDLG 186


>gi|323157127|gb|EFZ43251.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli EPECa14]
          Length = 352

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 50  VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 100

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 101 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 153

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 154 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 204

Query: 191 DL 192
           D 
Sbjct: 205 DF 206


>gi|320638417|gb|EFX08131.1| tRNA s(4)U8 sulfurtransferase [Escherichia coli O157:H7 str. G5101]
          Length = 482

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|315179841|gb|ADT86755.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio furnissii NCTC 11218]
          Length = 372

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 52/194 (26%), Gaps = 11/194 (5%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           N         ++  SGG DSS        +  +VE L     + +  E  C     + + 
Sbjct: 4   NRNANSQKKVIVGMSGGVDSSVSAYLLQQQGYQVEGLFMKNWEEDDNEEYC--TAAEDLA 61

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +            H +      +   +     +A            +  + I F  F   
Sbjct: 62  DAQAVCDKLGIHLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEF 119

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDT-------IRAIETAINLGMESHVTVHTPLMW 174
               L    I +G            +                   LG E       P+  
Sbjct: 120 ADEVLDADYIAMGHYVRRTFPEHGEKPQMLRGLDGNKDQSYFLYTLGHEQVARSLFPVGE 179

Query: 175 LKKYETWKLAQDIG 188
           L+K E  ++A++ G
Sbjct: 180 LEKPEVRRIAEEQG 193


>gi|331681817|ref|ZP_08382450.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli H299]
 gi|331081019|gb|EGI52184.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli H299]
          Length = 482

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|331651359|ref|ZP_08352384.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli M718]
 gi|331051100|gb|EGI23152.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli M718]
          Length = 482

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|300937033|ref|ZP_07151899.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 21-1]
 gi|300457864|gb|EFK21357.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 21-1]
          Length = 482

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|300918196|ref|ZP_07134803.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 115-1]
 gi|300414647|gb|EFJ97957.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 115-1]
          Length = 482

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|293408570|ref|ZP_06652409.1| thiamine biosynthesis protein ThiI [Escherichia coli B354]
 gi|291471748|gb|EFF14231.1| thiamine biosynthesis protein ThiI [Escherichia coli B354]
          Length = 482

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|293413678|ref|ZP_06656327.1| thiamine biosynthesis protein ThiI [Escherichia coli B185]
 gi|291433736|gb|EFF06709.1| thiamine biosynthesis protein ThiI [Escherichia coli B185]
          Length = 482

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|284920233|emb|CBG33292.1| thiamine biosynthesis protein ThiI [Escherichia coli 042]
          Length = 482

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|281177593|dbj|BAI53923.1| thiamine biosynthesis protein ThiI [Escherichia coli SE15]
          Length = 482

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|291281330|ref|YP_003498148.1| Thiamine biosynthesis protein thiI [Escherichia coli O55:H7 str.
           CB9615]
 gi|209743994|gb|ACI70304.1| putative oxidoreductase [Escherichia coli]
 gi|209744000|gb|ACI70307.1| putative oxidoreductase [Escherichia coli]
 gi|290761203|gb|ADD55164.1| Thiamine biosynthesis protein thiI [Escherichia coli O55:H7 str.
           CB9615]
 gi|320643797|gb|EFX12920.1| tRNA s(4)U8 sulfurtransferase [Escherichia coli O157:H- str.
           493-89]
 gi|320649148|gb|EFX17726.1| tRNA s(4)U8 sulfurtransferase [Escherichia coli O157:H- str. H
           2687]
 gi|320656041|gb|EFX23957.1| tRNA s(4)U8 sulfurtransferase [Escherichia coli O55:H7 str. 3256-97
           TW 07815]
 gi|320661191|gb|EFX28622.1| tRNA s(4)U8 sulfurtransferase [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320665167|gb|EFX32260.1| tRNA s(4)U8 sulfurtransferase [Escherichia coli O157:H7 str.
           LSU-61]
          Length = 482

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|218552986|ref|YP_002385899.1| thiamine biosynthesis protein ThiI [Escherichia coli IAI1]
 gi|226703945|sp|B7M3R2|THII_ECO8A RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|218359754|emb|CAQ97295.1| sulfurtransferase required for thiamine and 4-thiouridine
           biosynthesis [Escherichia coli IAI1]
          Length = 482

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|218549917|ref|YP_002383708.1| thiamine biosynthesis protein ThiI [Escherichia fergusonii ATCC
           35469]
 gi|226703948|sp|B7LMG4|THII_ESCF3 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|218357458|emb|CAQ90097.1| sulfurtransferase required for thiamine and 4-thiouridine
           biosynthesis [Escherichia fergusonii ATCC 35469]
          Length = 482

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|170767956|ref|ZP_02902409.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           albertii TW07627]
 gi|170123444|gb|EDS92375.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           albertii TW07627]
          Length = 482

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|170679960|ref|YP_001742560.1| thiamine biosynthesis protein ThiI [Escherichia coli SMS-3-5]
 gi|215485504|ref|YP_002327935.1| thiamine biosynthesis protein ThiI [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218698668|ref|YP_002406297.1| thiamine biosynthesis protein ThiI [Escherichia coli IAI39]
 gi|312964555|ref|ZP_07778811.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli 2362-75]
 gi|226703944|sp|B7NJ74|THII_ECO7I RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|226703947|sp|B1LJH3|THII_ECOSM RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|254784223|sp|B7UJP6|THII_ECO27 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|170517678|gb|ACB15856.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli SMS-3-5]
 gi|215263576|emb|CAS07906.1| sulfurtransferase required for thiamine and 4-thiouridine
           biosynthesis [Escherichia coli O127:H6 str. E2348/69]
 gi|218368654|emb|CAR16393.1| sulfurtransferase required for thiamine and 4-thiouridine
           biosynthesis [Escherichia coli IAI39]
 gi|312290789|gb|EFR18666.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli 2362-75]
          Length = 482

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|24111801|ref|NP_706311.1| thiamine biosynthesis protein ThiI [Shigella flexneri 2a str. 301]
 gi|24050591|gb|AAN42018.1| putative oxidoreductase [Shigella flexneri 2a str. 301]
          Length = 456

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|82542911|ref|YP_406858.1| thiamine biosynthesis protein ThiI [Shigella boydii Sb227]
 gi|123560447|sp|Q325H8|THII_SHIBS RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|81244322|gb|ABB65030.1| putative oxidoreductase [Shigella boydii Sb227]
 gi|320186052|gb|EFW60797.1| Thiamine biosynthesis protein thiI [Shigella flexneri CDC 796-83]
          Length = 482

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|82775668|ref|YP_402015.1| thiamine biosynthesis protein ThiI [Shigella dysenteriae Sd197]
 gi|309787016|ref|ZP_07681628.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
           dysenteriae 1617]
 gi|123563413|sp|Q32JI1|THII_SHIDS RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|81239816|gb|ABB60526.1| putative oxidoreductase [Shigella dysenteriae Sd197]
 gi|308924594|gb|EFP70089.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
           dysenteriae 1617]
          Length = 482

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|74310992|ref|YP_309411.1| thiamine biosynthesis protein ThiI [Shigella sonnei Ss046]
 gi|123746046|sp|Q3Z4Y6|THII_SHISS RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|73854469|gb|AAZ87176.1| putative oxidoreductase [Shigella sonnei Ss046]
 gi|323164214|gb|EFZ50021.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
           sonnei 53G]
          Length = 482

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|30061917|ref|NP_836088.1| thiamine biosynthesis protein ThiI [Shigella flexneri 2a str.
           2457T]
 gi|110804445|ref|YP_687965.1| thiamine biosynthesis protein ThiI [Shigella flexneri 5 str. 8401]
 gi|44888471|sp|Q83SG1|THII_SHIFL RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|122957624|sp|Q0T7G6|THII_SHIF8 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|30040161|gb|AAP15894.1| putative oxidoreductase [Shigella flexneri 2a str. 2457T]
 gi|110613993|gb|ABF02660.1| putative oxidoreductase [Shigella flexneri 5 str. 8401]
 gi|281599755|gb|ADA72739.1| Thiamine biosynthesis protein thiI [Shigella flexneri 2002017]
 gi|313646960|gb|EFS11417.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
           flexneri 2a str. 2457T]
 gi|332760703|gb|EGJ90991.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
           flexneri 4343-70]
 gi|332761713|gb|EGJ91992.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
           flexneri 2747-71]
 gi|332764300|gb|EGJ94536.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
           flexneri K-671]
 gi|332768528|gb|EGJ98711.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
           flexneri 2930-71]
 gi|333007913|gb|EGK27389.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
           flexneri K-218]
 gi|333008618|gb|EGK28086.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
           flexneri VA-6]
 gi|333010866|gb|EGK30292.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
           flexneri K-272]
 gi|333021365|gb|EGK40618.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
           flexneri K-227]
 gi|333022022|gb|EGK41267.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
           flexneri K-304]
          Length = 482

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|26246429|ref|NP_752468.1| thiamine biosynthesis protein ThiI [Escherichia coli CFT073]
 gi|91209492|ref|YP_539478.1| thiamine biosynthesis protein ThiI [Escherichia coli UTI89]
 gi|117622683|ref|YP_851596.1| thiamine biosynthesis protein ThiI [Escherichia coli APEC O1]
 gi|218557332|ref|YP_002390245.1| thiamine biosynthesis protein ThiI [Escherichia coli S88]
 gi|218688286|ref|YP_002396498.1| thiamine biosynthesis protein ThiI [Escherichia coli ED1a]
 gi|227884569|ref|ZP_04002374.1| thiamine biosynthesis protein ThiI [Escherichia coli 83972]
 gi|237707583|ref|ZP_04538064.1| thiamine biosynthesis protein thiI [Escherichia sp. 3_2_53FAA]
 gi|300988025|ref|ZP_07178505.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 45-1]
 gi|301049624|ref|ZP_07196575.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 185-1]
 gi|306813111|ref|ZP_07447304.1| thiamine biosynthesis protein ThiI [Escherichia coli NC101]
 gi|331656478|ref|ZP_08357440.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli TA206]
 gi|29337058|sp|Q8FKB7|THII_ECOL6 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|122424764|sp|Q1RFB7|THII_ECOUT RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|189030628|sp|A1A892|THII_ECOK1 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|226703943|sp|B7MD81|THII_ECO45 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|254784225|sp|B7MQD8|THII_ECO81 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|26106827|gb|AAN79012.1|AE016756_195 Thiamine biosynthesis protein thiI [Escherichia coli CFT073]
 gi|91071066|gb|ABE05947.1| thiamine biosynthesis protein ThiI [Escherichia coli UTI89]
 gi|115511807|gb|ABI99881.1| thiamine biosynthesis protein ThiI [Escherichia coli APEC O1]
 gi|218364101|emb|CAR01766.1| sulfurtransferase required for thiamine and 4-thiouridine
           biosynthesis [Escherichia coli S88]
 gi|218425850|emb|CAR06656.1| sulfurtransferase required for thiamine and 4-thiouridine
           biosynthesis [Escherichia coli ED1a]
 gi|222032218|emb|CAP74957.1| Thiamine biosynthesis protein thiI [Escherichia coli LF82]
 gi|226898793|gb|EEH85052.1| thiamine biosynthesis protein thiI [Escherichia sp. 3_2_53FAA]
 gi|227838655|gb|EEJ49121.1| thiamine biosynthesis protein ThiI [Escherichia coli 83972]
 gi|294492376|gb|ADE91132.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli IHE3034]
 gi|300298617|gb|EFJ55002.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 185-1]
 gi|300407577|gb|EFJ91115.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 45-1]
 gi|305853874|gb|EFM54313.1| thiamine biosynthesis protein ThiI [Escherichia coli NC101]
 gi|307552328|gb|ADN45103.1| thiamine biosynthesis protein ThiI [Escherichia coli ABU 83972]
 gi|307628108|gb|ADN72412.1| thiamine biosynthesis protein ThiI [Escherichia coli UM146]
 gi|312945000|gb|ADR25827.1| thiamine biosynthesis protein ThiI [Escherichia coli O83:H1 str.
           NRG 857C]
 gi|315289862|gb|EFU49252.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 110-3]
 gi|315294198|gb|EFU53549.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 153-1]
 gi|315299589|gb|EFU58837.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 16-3]
 gi|320197139|gb|EFW71756.1| Thiamine biosynthesis protein thiI [Escherichia coli WV_060327]
 gi|323191341|gb|EFZ76604.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli RN587/1]
 gi|323952965|gb|EGB48833.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli H252]
 gi|323958616|gb|EGB54319.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli H263]
 gi|324010101|gb|EGB79320.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 57-2]
 gi|331054726|gb|EGI26735.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli TA206]
          Length = 482

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|16128408|ref|NP_414957.1| tRNA s(4)U8 sulfurtransferase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|89107293|ref|AP_001073.1| sulfurtransferase required for thiamine and 4-thiouridine
           biosynthesis [Escherichia coli str. K-12 substr. W3110]
 gi|170080009|ref|YP_001729329.1| sulfurtransferase required for thiamine and 4-thiouridine
           biosynthesis [Escherichia coli str. K-12 substr. DH10B]
 gi|218703706|ref|YP_002411225.1| thiamine biosynthesis protein ThiI [Escherichia coli UMN026]
 gi|238899711|ref|YP_002925507.1| sulfurtransferase required for thiamine and 4-thiouridine
           biosynthesis [Escherichia coli BW2952]
 gi|256023960|ref|ZP_05437825.1| thiamine biosynthesis protein ThiI [Escherichia sp. 4_1_40B]
 gi|293403543|ref|ZP_06647634.1| thiamine biosynthesis protein ThiI [Escherichia coli FVEC1412]
 gi|298379155|ref|ZP_06989036.1| thiamine biosynthesis protein thiI [Escherichia coli FVEC1302]
 gi|300900491|ref|ZP_07118658.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 198-1]
 gi|300947926|ref|ZP_07162074.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 116-1]
 gi|300957988|ref|ZP_07170153.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 175-1]
 gi|301025690|ref|ZP_07189206.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 196-1]
 gi|301647346|ref|ZP_07247158.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 146-1]
 gi|307137066|ref|ZP_07496422.1| thiamine biosynthesis protein ThiI [Escherichia coli H736]
 gi|331640941|ref|ZP_08342076.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli H736]
 gi|331661802|ref|ZP_08362725.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli TA143]
 gi|331671969|ref|ZP_08372765.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli TA280]
 gi|2501549|sp|P77718|THII_ECOLI RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|226703946|sp|B7N8X6|THII_ECOLU RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|229558679|sp|B1XF11|THII_ECODH RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|259518547|sp|C4ZTI0|THII_ECOBW RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|1773107|gb|AAB40179.1| similar to M. jannaschii MG372 [Escherichia coli]
 gi|1786625|gb|AAC73526.1| tRNA s(4)U8 sulfurtransferase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|85674563|dbj|BAE76203.1| sulfurtransferase required for thiamine and 4-thiouridine
           biosynthesis [Escherichia coli str. K12 substr. W3110]
 gi|169887844|gb|ACB01551.1| sulfurtransferase required for thiamine and 4-thiouridine
           biosynthesis [Escherichia coli str. K-12 substr. DH10B]
 gi|218430803|emb|CAR11677.1| sulfurtransferase required for thiamine and 4-thiouridine
           biosynthesis [Escherichia coli UMN026]
 gi|238863607|gb|ACR65605.1| sulfurtransferase required for thiamine and 4-thiouridine
           biosynthesis [Escherichia coli BW2952]
 gi|260450390|gb|ACX40812.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli DH1]
 gi|291429396|gb|EFF02416.1| thiamine biosynthesis protein ThiI [Escherichia coli FVEC1412]
 gi|298280268|gb|EFI21772.1| thiamine biosynthesis protein thiI [Escherichia coli FVEC1302]
 gi|299880002|gb|EFI88213.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 196-1]
 gi|300315324|gb|EFJ65108.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 175-1]
 gi|300355972|gb|EFJ71842.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 198-1]
 gi|300452526|gb|EFK16146.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 116-1]
 gi|301074491|gb|EFK89297.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 146-1]
 gi|309700685|emb|CBI99981.1| thiamine biosynthesis protein ThiI [Escherichia coli ETEC H10407]
 gi|315135105|dbj|BAJ42264.1| thiamine biosynthesis protein ThiI [Escherichia coli DH1]
 gi|315616637|gb|EFU97254.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli 3431]
 gi|323938608|gb|EGB34857.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli E1520]
 gi|323943229|gb|EGB39385.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli E482]
 gi|331037739|gb|EGI09959.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli H736]
 gi|331060224|gb|EGI32188.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli TA143]
 gi|331070958|gb|EGI42317.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli TA280]
 gi|332341786|gb|AEE55120.1| thiamine biosynthesis protein ThiI [Escherichia coli UMNK88]
          Length = 482

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|15800153|ref|NP_286165.1| thiamine biosynthesis protein ThiI [Escherichia coli O157:H7
           EDL933]
 gi|15829731|ref|NP_308504.1| thiamine biosynthesis protein ThiI [Escherichia coli O157:H7 str.
           Sakai]
 gi|168749885|ref|ZP_02774907.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli O157:H7 str. EC4113]
 gi|168756965|ref|ZP_02781972.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli O157:H7 str. EC4401]
 gi|168761629|ref|ZP_02786636.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli O157:H7 str. EC4501]
 gi|168768374|ref|ZP_02793381.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli O157:H7 str. EC4486]
 gi|168776271|ref|ZP_02801278.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli O157:H7 str. EC4196]
 gi|168783289|ref|ZP_02808296.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli O157:H7 str. EC4076]
 gi|168786270|ref|ZP_02811277.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli O157:H7 str. EC869]
 gi|168800306|ref|ZP_02825313.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli O157:H7 str. EC508]
 gi|195938510|ref|ZP_03083892.1| thiamine biosynthesis protein ThiI [Escherichia coli O157:H7 str.
           EC4024]
 gi|208808957|ref|ZP_03251294.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli O157:H7 str. EC4206]
 gi|208815247|ref|ZP_03256426.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli O157:H7 str. EC4045]
 gi|208822980|ref|ZP_03263298.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli O157:H7 str. EC4042]
 gi|209397021|ref|YP_002269069.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli O157:H7 str. EC4115]
 gi|217325977|ref|ZP_03442061.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli O157:H7 str. TW14588]
 gi|254791607|ref|YP_003076444.1| thiamine biosynthesis protein ThiI [Escherichia coli O157:H7 str.
           TW14359]
 gi|261223904|ref|ZP_05938185.1| sulfur transfer protein [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256382|ref|ZP_05948915.1| sulfur transfer protein [Escherichia coli O157:H7 str. FRIK966]
 gi|20140595|sp|Q8XE74|THII_ECO57 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|226726949|sp|B5Z3S9|THII_ECO5E RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|12513279|gb|AAG54773.1|AE005221_10 putative oxidoreductase [Escherichia coli O157:H7 str. EDL933]
 gi|13359934|dbj|BAB33900.1| putative oxidoreductase [Escherichia coli O157:H7 str. Sakai]
 gi|187768273|gb|EDU32117.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli O157:H7 str. EC4196]
 gi|188015859|gb|EDU53981.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli O157:H7 str. EC4113]
 gi|188999332|gb|EDU68318.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli O157:H7 str. EC4076]
 gi|189356012|gb|EDU74431.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli O157:H7 str. EC4401]
 gi|189362457|gb|EDU80876.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli O157:H7 str. EC4486]
 gi|189368047|gb|EDU86463.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli O157:H7 str. EC4501]
 gi|189373595|gb|EDU92011.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli O157:H7 str. EC869]
 gi|189377419|gb|EDU95835.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli O157:H7 str. EC508]
 gi|208728758|gb|EDZ78359.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli O157:H7 str. EC4206]
 gi|208731895|gb|EDZ80583.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli O157:H7 str. EC4045]
 gi|208737173|gb|EDZ84857.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli O157:H7 str. EC4042]
 gi|209158421|gb|ACI35854.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli O157:H7 str. EC4115]
 gi|209743996|gb|ACI70305.1| putative oxidoreductase [Escherichia coli]
 gi|209743998|gb|ACI70306.1| putative oxidoreductase [Escherichia coli]
 gi|209744002|gb|ACI70308.1| putative oxidoreductase [Escherichia coli]
 gi|217322198|gb|EEC30622.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli O157:H7 str. TW14588]
 gi|254591007|gb|ACT70368.1| sulfur transfer protein [Escherichia coli O157:H7 str. TW14359]
 gi|320192837|gb|EFW67477.1| Thiamine biosynthesis protein thiI [Escherichia coli O157:H7 str.
           EC1212]
 gi|326341185|gb|EGD64977.1| Thiamine biosynthesis protein thiI [Escherichia coli O157:H7 str.
           1044]
 gi|326346040|gb|EGD69779.1| Thiamine biosynthesis protein thiI [Escherichia coli O157:H7 str.
           1125]
          Length = 482

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|194432608|ref|ZP_03064894.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
           dysenteriae 1012]
 gi|194419169|gb|EDX35252.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
           dysenteriae 1012]
 gi|320181595|gb|EFW56510.1| Thiamine biosynthesis protein thiI [Shigella boydii ATCC 9905]
          Length = 482

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|191166742|ref|ZP_03028569.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli B7A]
 gi|193065188|ref|ZP_03046261.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli E22]
 gi|194428860|ref|ZP_03061395.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli B171]
 gi|209917636|ref|YP_002291720.1| thiamine biosynthesis protein ThiI [Escherichia coli SE11]
 gi|218693883|ref|YP_002401550.1| thiamine biosynthesis protein ThiI [Escherichia coli 55989]
 gi|256020390|ref|ZP_05434255.1| thiamine biosynthesis protein ThiI [Shigella sp. D9]
 gi|260842621|ref|YP_003220399.1| sulfurtransferase [Escherichia coli O103:H2 str. 12009]
 gi|260866581|ref|YP_003232983.1| sulfurtransferase [Escherichia coli O111:H- str. 11128]
 gi|293418490|ref|ZP_06660925.1| thiamine biosynthesis protein thiI [Escherichia coli B088]
 gi|300818252|ref|ZP_07098463.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 107-1]
 gi|300820338|ref|ZP_07100490.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 119-7]
 gi|300903312|ref|ZP_07121240.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 84-1]
 gi|301301571|ref|ZP_07207706.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 124-1]
 gi|307312202|ref|ZP_07591838.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli W]
 gi|309794851|ref|ZP_07689272.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 145-7]
 gi|331666773|ref|ZP_08367647.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli TA271]
 gi|331676091|ref|ZP_08376803.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli H591]
 gi|332281570|ref|ZP_08393983.1| thiamine biosynthesis protein thiI [Shigella sp. D9]
 gi|226726950|sp|B6HZM6|THII_ECOSE RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|254784224|sp|B7L657|THII_ECO55 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|190903253|gb|EDV62975.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli B7A]
 gi|192927162|gb|EDV81783.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli E22]
 gi|194413163|gb|EDX29450.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli B171]
 gi|209910895|dbj|BAG75969.1| thiamine biosynthesis protein ThiI [Escherichia coli SE11]
 gi|218350615|emb|CAU96307.1| sulfurtransferase required for thiamine and 4-thiouridine
           biosynthesis [Escherichia coli 55989]
 gi|257757768|dbj|BAI29265.1| sulfurtransferase [Escherichia coli O103:H2 str. 12009]
 gi|257762937|dbj|BAI34432.1| sulfurtransferase [Escherichia coli O111:H- str. 11128]
 gi|291325018|gb|EFE64433.1| thiamine biosynthesis protein thiI [Escherichia coli B088]
 gi|300404607|gb|EFJ88145.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 84-1]
 gi|300527123|gb|EFK48192.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 119-7]
 gi|300529143|gb|EFK50205.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 107-1]
 gi|300843068|gb|EFK70828.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 124-1]
 gi|306907704|gb|EFN38206.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli W]
 gi|308121504|gb|EFO58766.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 145-7]
 gi|315059700|gb|ADT74027.1| sulfurtransferase required for thiamine and 4-thiouridine
           biosynthesis [Escherichia coli W]
 gi|315256248|gb|EFU36216.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 85-1]
 gi|320173759|gb|EFW48942.1| Thiamine biosynthesis protein thiI [Shigella dysenteriae CDC
           74-1112]
 gi|320201664|gb|EFW76240.1| Thiamine biosynthesis protein thiI [Escherichia coli EC4100B]
 gi|323160470|gb|EFZ46418.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli E128010]
 gi|323178313|gb|EFZ63891.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli 1180]
 gi|323184751|gb|EFZ70122.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli 1357]
 gi|323379734|gb|ADX52002.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli KO11]
 gi|323945324|gb|EGB41380.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli H120]
 gi|324016721|gb|EGB85940.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 117-3]
 gi|324116907|gb|EGC10820.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli E1167]
 gi|331065997|gb|EGI37881.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli TA271]
 gi|331076149|gb|EGI47431.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli H591]
 gi|332103922|gb|EGJ07268.1| thiamine biosynthesis protein thiI [Shigella sp. D9]
          Length = 482

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|170021205|ref|YP_001726159.1| thiamine biosynthesis protein ThiI [Escherichia coli ATCC 8739]
 gi|188493918|ref|ZP_03001188.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli 53638]
 gi|312970518|ref|ZP_07784699.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli 1827-70]
 gi|189030629|sp|B1J026|THII_ECOLC RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|169756133|gb|ACA78832.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli ATCC 8739]
 gi|188489117|gb|EDU64220.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli 53638]
 gi|310337167|gb|EFQ02305.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli 1827-70]
          Length = 482

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|120599623|ref|YP_964197.1| thiamine biosynthesis protein ThiI [Shewanella sp. W3-18-1]
 gi|146292383|ref|YP_001182807.1| thiamine biosynthesis protein ThiI [Shewanella putrefaciens CN-32]
 gi|189030652|sp|A4Y4X5|THII_SHEPC RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|189030655|sp|A1RLU8|THII_SHESW RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|120559716|gb|ABM25643.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
           sp. W3-18-1]
 gi|145564073|gb|ABP75008.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
           putrefaciens CN-32]
 gi|319425683|gb|ADV53757.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
           putrefaciens 200]
          Length = 484

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 60/188 (31%), Gaps = 25/188 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      L L SGG DS       + +  R     F+ G         +  +   + ++ 
Sbjct: 176 MATQEDVLSLISGGFDSGVSSYQFIKKGARTHYCFFNLGG-------AQHEI--GVKQVA 226

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                + GE H +          S   + V  +I +             + +  AA +A 
Sbjct: 227 YHLWKTYGESHKVKF-------VSVPFEPVVAEILEKIDNGQMGVVLKRMMMRTAARIAE 279

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           RLGI  +V G      S       + I      +         +  PL+ + K +    +
Sbjct: 280 RLGIQALVTGESLGQVSSQTLTNLNVIDRCTELL---------ILRPLIAMDKQDIINES 330

Query: 185 QDIGGQDL 192
           + IG +D 
Sbjct: 331 RRIGTEDF 338


>gi|191173532|ref|ZP_03035059.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli F11]
 gi|300997390|ref|ZP_07181730.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 200-1]
 gi|190906241|gb|EDV65853.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli F11]
 gi|300304209|gb|EFJ58729.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 200-1]
 gi|324010683|gb|EGB79902.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 60-1]
          Length = 482

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|157159945|ref|YP_001457263.1| thiamine biosynthesis protein ThiI [Escherichia coli HS]
 gi|193068615|ref|ZP_03049576.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli E110019]
 gi|194438886|ref|ZP_03070971.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli 101-1]
 gi|253774592|ref|YP_003037423.1| thiamine biosynthesis protein ThiI [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254160489|ref|YP_003043597.1| thiamine biosynthesis protein ThiI [Escherichia coli B str. REL606]
 gi|300930281|ref|ZP_07145694.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 187-1]
 gi|189030627|sp|A7ZX76|THII_ECOHS RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|157065625|gb|ABV04880.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli HS]
 gi|192957978|gb|EDV88420.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli E110019]
 gi|194422180|gb|EDX38182.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli 101-1]
 gi|242376201|emb|CAQ30892.1| thiI [Escherichia coli BL21(DE3)]
 gi|253325636|gb|ACT30238.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli 'BL21-Gold(DE3)pLysS AG']
 gi|253972390|gb|ACT38061.1| thiamine biosynthesis protein ThiI [Escherichia coli B str. REL606]
 gi|253976600|gb|ACT42270.1| thiamine biosynthesis protein ThiI [Escherichia coli BL21(DE3)]
 gi|300461853|gb|EFK25346.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 187-1]
 gi|323170505|gb|EFZ56155.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli LT-68]
 gi|323963409|gb|EGB58971.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli H489]
 gi|323972273|gb|EGB67483.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli TA007]
          Length = 482

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|157156951|ref|YP_001461606.1| thiamine biosynthesis protein ThiI [Escherichia coli E24377A]
 gi|300924144|ref|ZP_07140136.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 182-1]
 gi|301330715|ref|ZP_07223317.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 78-1]
 gi|189030626|sp|A7ZIH7|THII_ECO24 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|157078981|gb|ABV18689.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli E24377A]
 gi|300419597|gb|EFK02908.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 182-1]
 gi|300843376|gb|EFK71136.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 78-1]
          Length = 482

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|187731644|ref|YP_001879133.1| thiamine biosynthesis protein ThiI [Shigella boydii CDC 3083-94]
 gi|238689514|sp|B2U4M7|THII_SHIB3 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|187428636|gb|ACD07910.1| thiamine biosynthesis/tRNA modification protein ThiI [Shigella
           boydii CDC 3083-94]
          Length = 482

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|330972968|gb|EGH73034.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 484

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 57/183 (31%), Gaps = 29/183 (15%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWKD 69
           L+L SGG DS+      + R        F+ G R      +E    + KK          
Sbjct: 183 LVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAHELGVMEVAHFIWKKYG-------- 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     +    +  S   + V  +I      +        + L  A+ +A RL I 
Sbjct: 235 ----------SSQRVLFVSVPFEEVLGEILQKVDNSHMGVVLKRMMLRAASAVADRLEID 284

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G   +  +         I A    +         V  PL+   K +   LA +IG 
Sbjct: 285 VLVTGEAISQVASQTLPNLSLIDAATDKL---------VLRPLVATHKQDIVDLATEIGT 335

Query: 190 QDL 192
            D 
Sbjct: 336 ADF 338


>gi|311269579|ref|XP_003132551.1| PREDICTED: GMP synthase [glutamine-hydrolyzing]-like [Sus scrofa]
          Length = 330

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        D+V  +  D G   K E +      KK+   +   
Sbjct: 95  KVLVLLSGGVDSTVCTALLNRALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 154

Query: 68  K 68
            
Sbjct: 155 N 155


>gi|194221748|ref|XP_001488278.2| PREDICTED: similar to GMPS protein [Equus caballus]
          Length = 1032

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        D+V  +  D G   K E +      KK+   +   
Sbjct: 577 KVLVLLSGGVDSTVCTALLNRALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 636

Query: 68  K 68
            
Sbjct: 637 N 637


>gi|149064654|gb|EDM14805.1| guanine monphosphate synthetase, isoform CRA_a [Rattus norvegicus]
          Length = 529

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        D+V  +  D G   K E +      KK+   +   
Sbjct: 238 KVLVLLSGGVDSTVCTALLNRALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 297

Query: 68  K 68
            
Sbjct: 298 N 298


>gi|74144707|dbj|BAE27334.1| unnamed protein product [Mus musculus]
          Length = 693

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        D+V  +  D G   K E +      KK+   +   
Sbjct: 238 KVLVLLSGGVDSTVCTALLNRALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 297

Query: 68  K 68
            
Sbjct: 298 N 298


>gi|51873878|gb|AAH80685.1| Gmps protein [Mus musculus]
          Length = 477

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 10 SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            L+L SGG DS+ C +        D+V  +  D G   K E +      KK+   +   
Sbjct: 22 KVLVLLSGGVDSTVCTALLNRALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 81

Query: 68 K 68
           
Sbjct: 82 N 82


>gi|85861218|ref|NP_001028472.2| GMP synthase [glutamine-hydrolyzing] [Mus musculus]
 gi|145558920|sp|Q3THK7|GUAA_MOUSE RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|74139380|dbj|BAE40832.1| unnamed protein product [Mus musculus]
 gi|74146610|dbj|BAE41314.1| unnamed protein product [Mus musculus]
 gi|74226222|dbj|BAE25299.1| unnamed protein product [Mus musculus]
 gi|148703454|gb|EDL35401.1| mCG6377, isoform CRA_a [Mus musculus]
 gi|187952891|gb|AAI38412.1| Guanine monphosphate synthetase [Mus musculus]
 gi|187953909|gb|AAI38413.1| Guanine monphosphate synthetase [Mus musculus]
          Length = 693

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        D+V  +  D G   K E +      KK+   +   
Sbjct: 238 KVLVLLSGGVDSTVCTALLNRALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 297

Query: 68  K 68
            
Sbjct: 298 N 298


>gi|67078508|ref|NP_001019925.1| GMP synthase [glutamine-hydrolyzing] [Rattus norvegicus]
 gi|81908630|sp|Q4V7C6|GUAA_RAT RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|66910916|gb|AAH98016.1| Guanine monphosphate synthetase [Rattus norvegicus]
          Length = 693

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        D+V  +  D G   K E +      KK+   +   
Sbjct: 238 KVLVLLSGGVDSTVCTALLNRALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 297

Query: 68  K 68
            
Sbjct: 298 N 298


>gi|74212049|dbj|BAE40189.1| unnamed protein product [Mus musculus]
          Length = 693

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        D+V  +  D G   K E +      KK+   +   
Sbjct: 238 KVLVLLSGGVDSTVCTALLNRALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 297

Query: 68  K 68
            
Sbjct: 298 N 298


>gi|74193453|dbj|BAE20667.1| unnamed protein product [Mus musculus]
          Length = 682

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        D+V  +  D G   K E +      KK+   +   
Sbjct: 227 KVLVLLSGGVDSTVCTALLNRALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 286

Query: 68  K 68
            
Sbjct: 287 N 287


>gi|34580653|ref|ZP_00142133.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rickettsia sibirica 246]
 gi|28262038|gb|EAA25542.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rickettsia sibirica 246]
          Length = 365

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 54/194 (27%), Gaps = 9/194 (4%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKK 59
           M ++  K  + ++  SGG DSS   +   ++   V  ++   Y     V  +   C  + 
Sbjct: 1   MINLGDKQSTIVVAMSGGVDSSAVAAMLHEQGHNVIGITLQLYDHGMAVGKKNACCAGQD 60

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           I +            ++L           S+  N          P   V     +     
Sbjct: 61  IYDAKMVANKLGIPHYVLD---YESKFKESVIDNFVDSYLQGETPLPCVQCNKSVKFRDL 117

Query: 120 ATLAYRLGITNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
              A  LG   +     V  +   + +                     E    +  PL  
Sbjct: 118 IKTARELGADKLATGHYVRKINGDNGAELHTGLDPAKDQSYFLFTTTKEQLEYLRFPLGG 177

Query: 175 LKKYETWKLAQDIG 188
             K ET KLA   G
Sbjct: 178 FTKDETRKLASKFG 191


>gi|67458888|ref|YP_246512.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rickettsia felis URRWXCal2]
 gi|75536671|sp|Q4UM73|MNMA_RICFE RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|67004421|gb|AAY61347.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rickettsia felis URRWXCal2]
          Length = 365

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 55/194 (28%), Gaps = 9/194 (4%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKK 59
           M ++  K  + ++  SGG DSS   +   ++   V  ++   Y     V  +   C  + 
Sbjct: 1   MINLGDKQSTIVVAMSGGVDSSAVAAMLHEQGHNVIGITLQLYDHGMAVGKKNACCAGQD 60

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           I +            ++L           S+  N          P   V     +     
Sbjct: 61  IYDAKMVANKLGIPHYVLD---YESKFKESVIDNFVDSYLQGETPLPCVQCNKSVKFRDL 117

Query: 120 ATLAYRLGITNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
              A  LG   +     V  V   + +                     E    +  PL  
Sbjct: 118 IKTARELGAAQLATGHYVRKVNGDNGAELHTGLDPAKDQSYFLFTTTKEQLEYLSFPLGG 177

Query: 175 LKKYETWKLAQDIG 188
           L K ET +LA   G
Sbjct: 178 LTKDETRRLASKFG 191


>gi|326623649|gb|EGE29994.1| tRNA-specific 2-thiouridylase mnmA [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|326628111|gb|EGE34454.1| tRNA-specific 2-thiouridylase mnmA [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 383

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 54/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +     ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 16  MSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 73

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +             +  + I F  F    A
Sbjct: 74  QAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAA 131

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 LG E       P+  L+K 
Sbjct: 132 EDLGADYIATGHYVRRADVNGKSRLLRGLDGNKDQSYFLYTLGHEQIAQSLFPVGELEKP 191

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 192 QVRKIAEDLG 201


>gi|320086325|emb|CBY96098.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. 2007-60-3289-1]
          Length = 383

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 54/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +     ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 16  MSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 73

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +             +  + I F  F    A
Sbjct: 74  QAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAA 131

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 LG E       P+  L+K 
Sbjct: 132 EDLGADYIATGHYVRRADVNGKSRLLRGLDGNKDQSYFLYTLGHEQIAQSLFPVGELEKP 191

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 192 QVRKIAEDLG 201


>gi|332160734|ref|YP_004297311.1| thiamine biosynthesis protein ThiI [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318604613|emb|CBY26111.1| thiamine biosynthesis protein thiI [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325664964|gb|ADZ41608.1| thiamine biosynthesis protein ThiI [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330859970|emb|CBX70299.1| thiamine biosynthesis protein thiI [Yersinia enterocolitica W22703]
          Length = 483

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 181 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------SAHEI--GVKQVAHYLWNR 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 232 FGSSHRVRFVAI-------DFEPVVGEILEKVEDGQMGVVLKRMMVRAASQVAERYGVQA 284

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K     LA++IG +
Sbjct: 285 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIINLAREIGTE 335

Query: 191 DL 192
           D 
Sbjct: 336 DF 337


>gi|302382556|ref|YP_003818379.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Brevundimonas subvibrioides ATCC 15264]
 gi|302193184|gb|ADL00756.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Brevundimonas subvibrioides ATCC 15264]
          Length = 407

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/183 (12%), Positives = 52/183 (28%), Gaps = 4/183 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +        V  ++   Y     ++ +   C  + I +     +
Sbjct: 41  RVVAAMSGGVDSTVVAALLHKAGYDVVGVTLQLYDHGAALKKKGACCAGQDIHDARLAAE 100

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYR 125
                 ++L        +      +  +K Q        N  V  R+++ +      A  
Sbjct: 101 MLGIPHYVLDYESRFRDAVIDQFADSYLKGQTPVPCIRCNQTVKFRDLLDVARDLGAAAM 160

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                +   V     +        +            +    +  PL  L+K     +A 
Sbjct: 161 ATGHYVGRAVAADGRAQMRKAIDPSRDQSYFLFATTRDQLDYLRFPLAGLEKPAVRGVAA 220

Query: 186 DIG 188
           ++G
Sbjct: 221 ELG 223


>gi|238760653|ref|ZP_04621778.1| Thiamine biosynthesis protein thiI [Yersinia aldovae ATCC 35236]
 gi|238701118|gb|EEP93710.1| Thiamine biosynthesis protein thiI [Yersinia aldovae ATCC 35236]
          Length = 483

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 181 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------SAHEI--GVKQVAHYLWNR 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 232 FGSSHRVRFVAI-------DFEPVVGEILEKVEDGQMGVVLKRMMVRAASQVAERYGVQA 284

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K     LA++IG +
Sbjct: 285 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIINLAREIGTE 335

Query: 191 DL 192
           D 
Sbjct: 336 DF 337


>gi|238765449|ref|ZP_04626370.1| Thiamine biosynthesis protein thiI [Yersinia kristensenii ATCC
           33638]
 gi|238696343|gb|EEP89139.1| Thiamine biosynthesis protein thiI [Yersinia kristensenii ATCC
           33638]
          Length = 483

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 181 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------SAHEI--GVKQVAHYLWNR 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 232 FGSSHRVRFVAI-------DFEPVVGEILEKVEDGQMGVVLKRMMVRAASQVAERYGVQA 284

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K     LA++IG +
Sbjct: 285 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIINLAREIGTE 335

Query: 191 DL 192
           D 
Sbjct: 336 DF 337


>gi|197303193|ref|ZP_03168235.1| hypothetical protein RUMLAC_01916 [Ruminococcus lactaris ATCC
           29176]
 gi|197297733|gb|EDY32291.1| hypothetical protein RUMLAC_01916 [Ruminococcus lactaris ATCC
           29176]
          Length = 358

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 49/187 (26%), Gaps = 6/187 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS       ++   V  ++    Q  +  ++        +  +    
Sbjct: 3   KGKVVVGMSGGVDSSVAAWLLKEQGYDVIGVTMQIWQDEENTVQEENGGCCGLSAVDDAR 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           + +        +    D    S+ +    +      PN  +     +        +  +G
Sbjct: 63  RVAAAIGIPYYVMNFKDEFQKSVIEYFTKEYLAGRTPNPCIACNRYVKWEALLQRSLSIG 122

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMWLKKYETW 181
              I  G                  A           NL  E       P+    K    
Sbjct: 123 ADYIATGHYARIEHLPNGRYAIRRSATMEKDQTYALYNLTQEQLARTLMPVGEYSKDRIR 182

Query: 182 KLAQDIG 188
           ++A +IG
Sbjct: 183 EMADEIG 189


>gi|194378708|dbj|BAG63519.1| unnamed protein product [Homo sapiens]
          Length = 594

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 57/195 (29%), Gaps = 11/195 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        ++V  +  D G   K E +      KK+   +   
Sbjct: 139 KVLVLLSGGVDSTVCTALLNRALDQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 198

Query: 68  K-----DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP--NTFVPGRNIIFLVFAA 120
                  +      +           S T N+    ++      +TFV   N +      
Sbjct: 199 NAAHSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNL 258

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKY 178
                      +        S     + + I+       L         V  PL    K 
Sbjct: 259 KPEEVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKD 318

Query: 179 ETWKLAQDIGGQDLV 193
           E   L +++G  + +
Sbjct: 319 EVRILGRELGLPEEL 333


>gi|123443359|ref|YP_001007333.1| thiamine biosynthesis protein ThiI [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|189030672|sp|A1JNR2|THII_YERE8 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|122090320|emb|CAL13186.1| thiamine biosynthesis protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 483

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 181 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------SAHEI--GVKQVAHYLWNR 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 232 FGSSHRVRFVAI-------DFEPVVGEILEKVEDGQMGVVLKRMMVRAASQVAERYGVQA 284

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K     LA++IG +
Sbjct: 285 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIINLAREIGTE 335

Query: 191 DL 192
           D 
Sbjct: 336 DF 337


>gi|16419753|gb|AAL20163.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. LT2]
 gi|261246446|emb|CBG24256.1| 5-methylaminomethyl-2-thiouridylate-methyltrans ferase EC 2.1.1.61
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. D23580]
 gi|323129504|gb|ADX16934.1| tRNA-specific 2-thiouridylase mnmA [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|332988125|gb|AEF07108.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 383

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 54/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +     ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 16  MSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 73

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +             +  + I F  F    A
Sbjct: 74  QAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAA 131

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 LG E       P+  L+K 
Sbjct: 132 EDLGADYIATGHYVRRADVNGKSRLLRGLDGNKDQSYFLYTLGHEQIAQSLFPVGELEKP 191

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 192 QVRKIAEDLG 201


>gi|238787988|ref|ZP_04631784.1| Thiamine biosynthesis protein thiI [Yersinia frederiksenii ATCC
           33641]
 gi|238723936|gb|EEQ15580.1| Thiamine biosynthesis protein thiI [Yersinia frederiksenii ATCC
           33641]
          Length = 483

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 181 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------SAHEI--GVKQVAHYLWNR 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 232 FGSSHRVRFVAI-------DFEPVVGEILEKVEDGQMGVVLKRMMVRAASQVAERYGVQA 284

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K     LA++IG +
Sbjct: 285 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIINLAREIGTE 335

Query: 191 DL 192
           D 
Sbjct: 336 DF 337


>gi|213971000|ref|ZP_03399121.1| thiamin biosynthesis protein ThiI [Pseudomonas syringae pv. tomato
           T1]
 gi|301382256|ref|ZP_07230674.1| thiamine biosynthesis protein ThiI [Pseudomonas syringae pv. tomato
           Max13]
 gi|302059550|ref|ZP_07251091.1| thiamine biosynthesis protein ThiI [Pseudomonas syringae pv. tomato
           K40]
 gi|302133556|ref|ZP_07259546.1| thiamine biosynthesis protein ThiI [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|213924236|gb|EEB57810.1| thiamin biosynthesis protein ThiI [Pseudomonas syringae pv. tomato
           T1]
          Length = 484

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 57/183 (31%), Gaps = 29/183 (15%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWKD 69
           L+L SGG DS+      + R        F+ G R      +E    + KK          
Sbjct: 183 LVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAHELGVMEVAHFIWKKYG-------- 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     +    +  S   + V  +I      +        + L  A+ +A RL I 
Sbjct: 235 ----------SSQRVLFVSVPFEEVLGEILQKVDNSHMGVVLKRMMLRAASAVADRLEID 284

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G   +  +         I A    +         V  PL+   K +   LA +IG 
Sbjct: 285 VLVTGEAISQVASQTLPNLSLIDAATDKL---------VLRPLVATHKQDIVDLATEIGT 335

Query: 190 QDL 192
            D 
Sbjct: 336 ADF 338


>gi|62127388|gb|AAX65091.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
          Length = 383

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 54/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +     ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 16  MSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 73

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +             +  + I F  F    A
Sbjct: 74  QAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAA 131

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 LG E       P+  L+K 
Sbjct: 132 EDLGADYIATGHYVRRADVNGKSRLLRGLDGNKDQSYFLYTLGHEQIAQSLFPVGELEKP 191

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 192 QVRKIAEDLG 201


>gi|28867590|ref|NP_790209.1| thiamin biosynthesis protein ThiI [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|37999600|sp|Q88AM9|THII_PSESM RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|28850825|gb|AAO53904.1| thiamin biosynthesis protein ThiI [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|330874601|gb|EGH08750.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330965651|gb|EGH65911.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas syringae pv. actinidiae
           str. M302091]
 gi|331014896|gb|EGH94952.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 484

 Score = 57.6 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 57/183 (31%), Gaps = 29/183 (15%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWKD 69
           L+L SGG DS+      + R        F+ G R      +E    + KK          
Sbjct: 183 LVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAHELGVMEVAHFIWKKYG-------- 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     +    +  S   + V  +I      +        + L  A+ +A RL I 
Sbjct: 235 ----------SSQRVLFVSVPFEEVLGEILQKVDNSHMGVVLKRMMLRAASAVADRLEID 284

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G   +  +         I A    +         V  PL+   K +   LA +IG 
Sbjct: 285 VLVTGEAISQVASQTLPNLSLIDAATDKL---------VLRPLVATHKQDIVDLATEIGT 335

Query: 190 QDL 192
            D 
Sbjct: 336 ADF 338


>gi|311280688|ref|YP_003942919.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterobacter
           cloacae SCF1]
 gi|308749883|gb|ADO49635.1| thiamine biosynthesis/tRNA modification protein ThiI [Enterobacter
           cloacae SCF1]
          Length = 482

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 57/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         V  PL+   K     LA++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------VLRPLISYDKEHIINLAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|126729666|ref|ZP_01745479.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sagittula stellata E-37]
 gi|126709785|gb|EBA08838.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sagittula stellata E-37]
          Length = 379

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 48/184 (26%), Gaps = 6/184 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +   +    V  ++   Y     +  +   C    I +     +
Sbjct: 20  RVVVAMSGGVDSSVVAAMLKEEGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDARRVAE 79

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D     ++L    +   +      +  +                   L+  A        
Sbjct: 80  DMGFPHYVLDYENIFQEAVIEEFADSYLGGATPVPCIRCNERVKFKDLLETAKDLEA-DC 138

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL----KKYETWKLA 184
                 +     +  P+       A + +  L   +   +      L     K  T +LA
Sbjct: 139 MATGHYIQRKTGARGPELHSAADAARDQSYFLFSTTPEQLDFLRFPLGHLPSKAATRELA 198

Query: 185 QDIG 188
              G
Sbjct: 199 ARYG 202


>gi|89898057|ref|YP_515167.1| PP-loop superfamily ATPase [Chlamydophila felis Fe/C-56]
 gi|123483693|sp|Q255L6|TILS_CHLFF RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
          Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
          Full=tRNA(Ile)-lysidine synthetase
 gi|89331429|dbj|BAE81022.1| PP-loop superfamily ATPase [Chlamydophila felis Fe/C-56]
          Length = 317

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 25/72 (34%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          +    S LL  SGG DS   L     R      +  DYG R     E      +   E +
Sbjct: 19 LDMKKSYLLALSGGSDSLFLLYLLKSRGVSFIAVHVDYGWRESSYREAEELELRCQAEGV 78

Query: 65 PKWKDSLGEDHI 76
          P   D +  ++ 
Sbjct: 79 PIIVDHVPPEYR 90


>gi|282896191|ref|ZP_06304214.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Raphidiopsis brookii D9]
 gi|281198880|gb|EFA73758.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Raphidiopsis brookii D9]
          Length = 350

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 55/189 (29%), Gaps = 15/189 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS   +   ++   V  L+        +      C  + +V+    
Sbjct: 1   MMKKVVVGLSGGVDSSVAAAILHNQGYDVIGLTL------WLMKGKGQCCSEGMVDAATI 54

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +       I+ +  +   +       V+               R + F         +L
Sbjct: 55  CQQLDIPHEIVDMRDVFQTNIVDYL--VSGYSAGITPLPCSQCNRTVKFGPMLQYAKDKL 112

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-------VTVHTPLMWLKKYE 179
               I  G        +   R+  +RA +   +     +            PL  L K +
Sbjct: 113 QSDTIATGHYARIAYDHRTERYQLLRAFDRNKDQSYFLYDLSQELLAGTIFPLGELNKND 172

Query: 180 TWKLAQDIG 188
           T K+A + G
Sbjct: 173 TRKIASEYG 181


>gi|269986127|gb|EEZ92441.1| thiamine biosynthesis protein [Candidatus Parvarchaeum acidiphilum
           ARMAN-4]
          Length = 366

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 52/189 (27%), Gaps = 28/189 (14%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWKDS 70
           L LFSGG DS+      + R  +V+ L        +         +  K+  +       
Sbjct: 162 LSLFSGGIDSAIAPLEMMKRGSKVDLLHIYALNSPDFALESKISTIANKLSTVEQGLNLY 221

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           L   H   +A L                         +       L  A  ++   G   
Sbjct: 222 LIPFHYFSVAALK------------------IEKRYELVLFKRFLLKLAEEISKEKGYMA 263

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G   +  +          + IE    +     + V  P +   K E    +   G  
Sbjct: 264 IVTGDALSQVAS---------QTIENINAISFGIDLPVFRPFIGYNKSEIIDKSIKYGFY 314

Query: 191 DLVNLILEE 199
           +L     ++
Sbjct: 315 ELSIEEYKD 323


>gi|237731114|ref|ZP_04561595.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Citrobacter sp. 30_2]
 gi|226906653|gb|EEH92571.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Citrobacter sp. 30_2]
          Length = 383

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 54/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +     ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 16  MSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 73

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +             +  + I F  F    A
Sbjct: 74  QAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAA 131

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 LG E       P+  L+K 
Sbjct: 132 EDLGADYIATGHYVRRADVDGKSRLLRGLDGNKDQSYFLYTLGHEQIAQSLFPVGELEKP 191

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 192 QVRKIAEDLG 201


>gi|162139594|ref|YP_216172.2| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|71658017|sp|Q57QC0|MNMA_SALCH RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|322714225|gb|EFZ05796.1| tRNA-specific 2-thiouridylase mnmA [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 368

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 54/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +     ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +             +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 LG E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRADVNGKSRLLRGLDGNKDQSYFLYTLGHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 177 QVRKIAEDLG 186


>gi|16760109|ref|NP_455726.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29142120|ref|NP_805462.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56413780|ref|YP_150855.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|161614531|ref|YP_001588496.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|168233116|ref|ZP_02658174.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|168244308|ref|ZP_02669240.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
 gi|168467196|ref|ZP_02701038.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|168822341|ref|ZP_02834341.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|194444280|ref|YP_002040490.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194449928|ref|YP_002045236.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194472097|ref|ZP_03078081.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|197249278|ref|YP_002146807.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197362703|ref|YP_002142340.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|198245672|ref|YP_002215901.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|204930753|ref|ZP_03221626.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|205353032|ref|YP_002226833.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207857259|ref|YP_002243910.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|213428090|ref|ZP_03360840.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E02-1180]
 gi|213580464|ref|ZP_03362290.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-0664]
 gi|213612639|ref|ZP_03370465.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-2068]
 gi|213648222|ref|ZP_03378275.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           J185]
 gi|224584258|ref|YP_002638056.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|24638320|sp|Q8Z7G9|MNMA_SALTI RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|71658018|sp|Q5PMJ4|MNMA_SALPA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205816911|sp|A9N4K8|MNMA_SALPB RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|25298380|pir||AC0647 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC
           2.1.1.61) [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16502403|emb|CAD08358.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi]
 gi|29137749|gb|AAO69311.1| tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           Ty2]
 gi|56128037|gb|AAV77543.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. ATCC 9150]
 gi|161363895|gb|ABX67663.1| hypothetical protein SPAB_02280 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194402943|gb|ACF63165.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
 gi|194408232|gb|ACF68451.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL476]
 gi|194458461|gb|EDX47300.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|195630429|gb|EDX49055.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|197094180|emb|CAR59684.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. AKU_12601]
 gi|197212981|gb|ACH50378.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Agona str.
           SL483]
 gi|197940188|gb|ACH77521.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|204320212|gb|EDZ05416.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|205272813|emb|CAR37739.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 287/91]
 gi|205332653|gb|EDZ19417.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|205336786|gb|EDZ23550.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
 gi|205341217|gb|EDZ27981.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|206709062|emb|CAR33395.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. P125109]
 gi|224468785|gb|ACN46615.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Paratyphi C
           strain RKS4594]
 gi|322616610|gb|EFY13519.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322619875|gb|EFY16749.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622443|gb|EFY19288.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322629439|gb|EFY26216.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322632935|gb|EFY29678.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322636820|gb|EFY33523.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641380|gb|EFY38019.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322645145|gb|EFY41674.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322652308|gb|EFY48664.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322655660|gb|EFY51962.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322660965|gb|EFY57195.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322665449|gb|EFY61637.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322667574|gb|EFY63735.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322673632|gb|EFY69734.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322677558|gb|EFY73622.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322679777|gb|EFY75816.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322687250|gb|EFY83222.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323193058|gb|EFZ78280.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323199445|gb|EFZ84538.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323203633|gb|EFZ88655.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323208826|gb|EFZ93764.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323217800|gb|EGA02515.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323218889|gb|EGA03400.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323226637|gb|EGA10837.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229603|gb|EGA13726.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323232828|gb|EGA16924.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240136|gb|EGA24180.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242877|gb|EGA26898.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323246793|gb|EGA30763.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323254307|gb|EGA38124.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323255573|gb|EGA39332.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323259407|gb|EGA43043.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323267003|gb|EGA50488.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323272107|gb|EGA55521.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 368

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 54/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +     ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +             +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 LG E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRADVNGKSRLLRGLDGNKDQSYFLYTLGHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 177 QVRKIAEDLG 186


>gi|39546313|ref|NP_460204.2| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|167991976|ref|ZP_02573075.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168264253|ref|ZP_02686226.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
 gi|197263918|ref|ZP_03163992.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|200391023|ref|ZP_03217634.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|24638322|sp|Q8ZPZ4|MNMA_SALTY RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|197242173|gb|EDY24793.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|199603468|gb|EDZ02014.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|205329792|gb|EDZ16556.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205347303|gb|EDZ33934.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
 gi|267993013|gb|ACY87898.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. 14028S]
 gi|301157775|emb|CBW17268.1| Probable tRNA [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312912222|dbj|BAJ36196.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321223852|gb|EFX48915.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. TN061786]
          Length = 368

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 54/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +     ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +             +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 LG E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRADVNGKSRLLRGLDGNKDQSYFLYTLGHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 177 QVRKIAEDLG 186


>gi|291085497|ref|ZP_06353231.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Citrobacter youngae ATCC 29220]
 gi|291071151|gb|EFE09260.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Citrobacter youngae ATCC 29220]
          Length = 383

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 54/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +     ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 16  MSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 73

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +             +  + I F  F    A
Sbjct: 74  QAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAA 131

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 LG E       P+  L+K 
Sbjct: 132 EDLGADYIATGHYVRRADVDGKSRLLRGLDGNKDQSYFLYTLGHEQIAQSLFPVGELEKP 191

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 192 QVRKIAEDLG 201


>gi|284925349|gb|ADC27701.1| tRNA-specific 2-thiouridylase MnmA [Campylobacter jejuni subsp.
           jejuni IA3902]
          Length = 338

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 43/176 (24%), Gaps = 10/176 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DS+       +    V          +         ++K    +      
Sbjct: 2   KILVAMSGGVDSTVTAYKLKNLGHEVIGCYMK---LHGKPNYHEENIKK----VEKVANF 54

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                HIL    L +   + +        ++   PN        I L      A  LG  
Sbjct: 55  LQIPYHILD---LQEDFKNKVYMPFVDTYKEGKTPNPCALCNRFIKLGKLLEFAKSLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            +  G      +       D  +     +    +  +      +   K E  K   
Sbjct: 112 KLATGHYARLENNLIKTAVDESKDQSYFLASADKEALKYLIFPLGEMKKEDVKKFA 167


>gi|283955497|ref|ZP_06372992.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792958|gb|EFC31732.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter jejuni subsp. jejuni 1336]
          Length = 338

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 43/176 (24%), Gaps = 10/176 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DS+       +    V          +         ++K    +      
Sbjct: 2   KILVAMSGGVDSTVTAYKLKNLGHEVIGCYMK---LHGKPNYHEENIKK----VEKVANF 54

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                HIL    L +   + +        ++   PN        I L      A  LG  
Sbjct: 55  LQIPYHILD---LQEDFKNKVYMPFVDTYKEGKTPNPCALCNRFIKLGKLLEFAKSLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            +  G      +       D  +     +    +  +      +   K E  K   
Sbjct: 112 KLATGHYARLENNLIKTAVDESKDQSYFLASADKEALKYLIFPLGEMKKEDVKKFA 167


>gi|157146082|ref|YP_001453401.1| tRNA-specific 2-thiouridylase MnmA [Citrobacter koseri ATCC
           BAA-895]
 gi|157083287|gb|ABV12965.1| hypothetical protein CKO_01838 [Citrobacter koseri ATCC BAA-895]
          Length = 383

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 54/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +     ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 16  MSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 73

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +             +  + I F  F    A
Sbjct: 74  QAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAA 131

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 LG E       P+  L+K 
Sbjct: 132 EDLGADYIATGHYVRRADVDGKSRLLRGLDGNKDQSYFLYTLGHEQIAQSLFPVGELEKP 191

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 192 QVRKIAEDLG 201


>gi|91787812|ref|YP_548764.1| hypothetical protein Bpro_1935 [Polaromonas sp. JS666]
 gi|91697037|gb|ABE43866.1| conserved hypothetical protein [Polaromonas sp. JS666]
          Length = 466

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/226 (11%), Positives = 55/226 (24%), Gaps = 19/226 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
                + +S G DS    +         E +  +    +++     L   +       + 
Sbjct: 146 QERVFMPYSNGLDSFALANQVQRDSSTTELILINVQAAHRLTNWKNLGRARDKDMQAVQV 205

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                E H    +         +                         +V        LG
Sbjct: 206 AVFFNEPHRTEPSFRSRPFIYDMLAG------------YGASLAQPAKVVIPENGQGSLG 253

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            + + +G      S +P       R +    N+     V    P ++  K +        
Sbjct: 254 GSLVPLGDEAPHRSCHPGFTSRLTRLVNALTNV----TVRFEHPALFQTKGQVLAQLAS- 308

Query: 188 GGQDLVNLILEESHTC-YLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
             +      L    +C Y  +   + +    C  C  C LR+    
Sbjct: 309 -QKSASEAWLAGHRSCSYDARHSSQDKRSMHCGVCGNCLLRRVALK 353


>gi|332987373|gb|AEF06356.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 482

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|301157036|emb|CBW16519.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|323128744|gb|ADX16174.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
          Length = 482

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|225174283|ref|ZP_03728282.1| GMP synthase, large subunit [Dethiobacter alkaliphilus AHT 1]
 gi|225170068|gb|EEG78863.1| GMP synthase, large subunit [Dethiobacter alkaliphilus AHT 1]
          Length = 435

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 58/184 (31%), Gaps = 20/184 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +  +     ++  +  ++G   K E E  + V K  ++    +
Sbjct: 141 KKVLLALSGGVDSSVVAALLIKAIGKQLVCVHVNHGLMRKNESEAVVEVFKNQLDANLIY 200

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D+           L  +++ S  +     I    +       R +             G
Sbjct: 201 VDA-------SERFLNKLANVSDPEEKRKVIGTEFIRVFEEEARKL------------EG 241

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           +++      L  +   ++  PL  L K E      ++
Sbjct: 242 IDFLAQGTIYPDIVESGTKTASVVKSHHNVGGLPEDLQFSLVEPLYHLFKDEVRACGIEL 301

Query: 188 GGQD 191
           G  +
Sbjct: 302 GLPE 305


>gi|205351736|ref|YP_002225537.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|226729115|sp|B5R6S6|THII_SALG2 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|205271517|emb|CAR36335.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|326626771|gb|EGE33114.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 482

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|168818964|ref|ZP_02830964.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|205343976|gb|EDZ30740.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|320084701|emb|CBY94492.1| Thiamine biosynthesis protein thiI [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
          Length = 482

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|168240248|ref|ZP_02665180.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|168465515|ref|ZP_02699397.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|194446549|ref|YP_002039667.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194448678|ref|YP_002044460.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|226729114|sp|B4T8R6|THII_SALHS RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|238693541|sp|B4SWR7|THII_SALNS RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|194405212|gb|ACF65434.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194406982|gb|ACF67201.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|195631978|gb|EDX50498.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|205339722|gb|EDZ26486.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
          Length = 482

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|168232398|ref|ZP_02657456.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|194472893|ref|ZP_03078877.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|194459257|gb|EDX48096.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|205333477|gb|EDZ20241.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
          Length = 482

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|168261142|ref|ZP_02683115.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|198242480|ref|YP_002214379.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200390289|ref|ZP_03216900.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|207855906|ref|YP_002242557.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|226726953|sp|B5FKT0|THII_SALDC RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|226729116|sp|B5QTH3|THII_SALEP RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|197936996|gb|ACH74329.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|199602734|gb|EDZ01280.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|205349900|gb|EDZ36531.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|206707709|emb|CAR31993.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|326622127|gb|EGE28472.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
           enterica subsp. enterica serovar Dublin str. 3246]
          Length = 482

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|167551764|ref|ZP_02345517.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|205323444|gb|EDZ11283.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
          Length = 482

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|161615387|ref|YP_001589352.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|189030643|sp|A9MX06|THII_SALPB RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|161364751|gb|ABX68519.1| hypothetical protein SPAB_03158 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 482

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|161504391|ref|YP_001571503.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|189030642|sp|A9MM39|THII_SALAR RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|160865738|gb|ABX22361.1| hypothetical protein SARI_02502 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 482

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|157146961|ref|YP_001454280.1| thiamine biosynthesis protein ThiI [Citrobacter koseri ATCC
           BAA-895]
 gi|189030622|sp|A8AK31|THII_CITK8 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|157084166|gb|ABV13844.1| hypothetical protein CKO_02738 [Citrobacter koseri ATCC BAA-895]
          Length = 482

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|56414420|ref|YP_151495.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|168237538|ref|ZP_02662596.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|194735073|ref|YP_002113458.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197250561|ref|YP_002145407.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197266005|ref|ZP_03166079.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|197363340|ref|YP_002142977.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|204926685|ref|ZP_03217887.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|238911442|ref|ZP_04655279.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|81821410|sp|Q5PFQ4|THII_SALPA RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|226726952|sp|B5EXG6|THII_SALA4 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|238689943|sp|B5BDA7|THII_SALPK RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|238690695|sp|B4TMA5|THII_SALSV RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|56128677|gb|AAV78183.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|194710575|gb|ACF89796.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197094817|emb|CAR60350.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|197214264|gb|ACH51661.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197244260|gb|EDY26880.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|197289454|gb|EDY28817.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|204323350|gb|EDZ08545.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|322614705|gb|EFY11634.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322618811|gb|EFY15699.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322623518|gb|EFY20357.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322629184|gb|EFY25963.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322631904|gb|EFY28658.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322637359|gb|EFY34061.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322642044|gb|EFY38654.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322647863|gb|EFY44338.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322652541|gb|EFY48895.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322653297|gb|EFY49630.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322660554|gb|EFY56790.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322664706|gb|EFY60899.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322669241|gb|EFY65391.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322670786|gb|EFY66919.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322678975|gb|EFY75030.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682003|gb|EFY78028.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322685168|gb|EFY81165.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323194484|gb|EFZ79679.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323196979|gb|EFZ82121.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323203964|gb|EFZ88981.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323206951|gb|EFZ91904.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323210831|gb|EFZ95703.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323214522|gb|EFZ99273.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323223079|gb|EGA07422.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323227028|gb|EGA11209.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323230154|gb|EGA14274.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323233892|gb|EGA17981.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323238414|gb|EGA22472.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323244102|gb|EGA28111.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323246262|gb|EGA30245.1| tRNA s(4)U8 sulfurtransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323251888|gb|EGA35751.1| tRNA s(4)U8 sulfurtransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323257885|gb|EGA41564.1| tRNA s(4)U8 sulfurtransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323261102|gb|EGA44694.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323264968|gb|EGA48467.1| tRNA s(4)U8 sulfurtransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323272531|gb|EGA55938.1| tRNA s(4)U8 sulfurtransferase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 482

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|16763805|ref|NP_459420.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|167992275|ref|ZP_02573373.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|3915896|sp|P55913|THII_SALTY RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|2098763|gb|AAB63031.1| ThiI [Salmonella enterica subsp. enterica serovar Typhimurium]
 gi|16418930|gb|AAL19379.1| sulfur transfer protein (from cys to ThiS and from IscS to U8-tRNA)
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. LT2]
 gi|205329560|gb|EDZ16324.1| thiamine biosynthesis/tRNA modification protein ThiI [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|261245708|emb|CBG23504.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267992137|gb|ACY87022.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|312911458|dbj|BAJ35432.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321225153|gb|EFX50214.1| Thiamine biosynthesis protein thiI [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
          Length = 482

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|307595677|ref|YP_003901994.1| thiamine biosynthesis/tRNA modification protein ThiI [Vulcanisaeta
           distributa DSM 14429]
 gi|307550878|gb|ADN50943.1| thiamine biosynthesis/tRNA modification protein ThiI [Vulcanisaeta
           distributa DSM 14429]
          Length = 483

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 55/184 (29%), Gaps = 25/184 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L L SGG DS     + + R   V+ L           ++    +R   V        
Sbjct: 176 KLLALISGGFDSPVAAWFMMRRGSYVDALFCSL----AYPIDVINFLRVSHVLFSRWSIG 231

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 I+  + L              + +    P+ +      +    A+ +A  +   
Sbjct: 232 YDPRLFIIDCSPL------------IGEFRAKADPHMWSVLFKRVLYEVASRVARSISAL 279

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      S          + +   + +     + ++ PL+ L K E    A+ IG 
Sbjct: 280 GIVTGESLGQVSS---------QTLHNLMAIEHGIDMPIYRPLIGLDKDEIMNYARRIGT 330

Query: 190 QDLV 193
            +  
Sbjct: 331 YEES 334


>gi|119945887|ref|YP_943567.1| thiamine biosynthesis protein ThiI [Psychromonas ingrahamii 37]
 gi|189030641|sp|A1SWV3|THII_PSYIN RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|119864491|gb|ABM03968.1| sulfur transferase ThiI [Psychromonas ingrahamii 37]
          Length = 484

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 60/192 (31%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             S L L SGG DS       + R  RV    F+ G            +   + ++  + 
Sbjct: 179 QESVLSLISGGFDSGVSSYKLIKRGSRVHYCFFNLGGG-------AHEI--GVKQVAYQL 229

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +  G  H +    +         + V  +I +             + +  A  +A RLG
Sbjct: 230 WNRFGSSHRVKFISI-------PFEPVVAEILEKVENGQMGVVLKRMMMRAATLMAERLG 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  ++ G      S         I  +   +         +  PL+   K +    A+ I
Sbjct: 283 VEALITGEALGQVSSQTLRNLSVIDKVSDML---------ILRPLIATDKQDIVDCARVI 333

Query: 188 GGQDLVNLILEE 199
           G  ++   I E 
Sbjct: 334 GTAEISETIPEY 345


>gi|71737034|ref|YP_276939.1| thiamine biosynthesis protein ThiI [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71557587|gb|AAZ36798.1| thiamin biosynthesis protein ThiI [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 505

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 57/183 (31%), Gaps = 29/183 (15%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWKD 69
           L+L SGG DS+      + R        F+ G R      +E    + KK          
Sbjct: 204 LVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAHELGVMEVAHFIWKKYG-------- 255

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     +    +  S   + V  +I      +        + L  A+ +A RL I 
Sbjct: 256 ----------SSQRVLFVSVPFEEVLGEILQKVDNSHMGVVLKRMMLRAASAVADRLEID 305

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G   +  +         I A    +         V  PL+   K +   LA +IG 
Sbjct: 306 VLVTGEAISQVASQTLPNLSLIDAATDKL---------VLRPLVASHKQDIVDLATEIGT 356

Query: 190 QDL 192
            D 
Sbjct: 357 ADF 359


>gi|57169043|ref|ZP_00368171.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter coli RM2228]
 gi|57019588|gb|EAL56278.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter coli RM2228]
          Length = 338

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 43/176 (24%), Gaps = 10/176 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DS+       +    V          +         ++K    +      
Sbjct: 2   KILVAMSGGVDSTVTAYKLKNLGHEVIGCYMK---LHGKPNYHEENIKK----VEKVANF 54

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                HIL    L +   + +        ++   PN        I L      A  LG  
Sbjct: 55  LQIPYHILD---LQEDFKNKVYMPFVDTYKEGKTPNPCALCNRFIKLGKLLEFAKSLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            +  G      +       D  +     +    +  +      +   K E  K   
Sbjct: 112 KLATGHYARLENNLIRTAVDESKDQSYFLASADKEALKYLIFPLGEMKKEDVKKFA 167


>gi|302392703|ref|YP_003828523.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acetohalobium arabaticum DSM 5501]
 gi|302204780|gb|ADL13458.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acetohalobium arabaticum DSM 5501]
          Length = 361

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 49/188 (26%), Gaps = 11/188 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR--KKIVELMP 65
               ++  SGG DSS   +        V  ++       +  ++          + +   
Sbjct: 6   QNRVVVAMSGGVDSSLAAAILKKEGYEVIGITMKIWPSEETPVDNENGCCSLSAVNDARR 65

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    +++    L      ++ +N   +      PN  V    +I        A  
Sbjct: 66  VAYKLDIPFYVINFEDL---FKRTVIQNFKNEYAQARTPNPCVVCNKVIKFNAFLNKAKE 122

Query: 126 LGITNIVIGVCETDYSGYPDCR------HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           LG   +  G                              NL  E       PL    K +
Sbjct: 123 LGAYYMATGHYAKIIQNEDGRYLLKKSAAPDKDQTYMLYNLTQEQLKHTIFPLAEYTKQQ 182

Query: 180 TWKLAQDI 187
           T +LA+D 
Sbjct: 183 TRELAKDY 190


>gi|205814741|sp|A8AHK2|MNMA_CITK8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 368

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 54/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +     ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +             +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 LG E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDGNKDQSYFLYTLGHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 177 QVRKIAEDLG 186


>gi|315231792|ref|YP_004072228.1| GMP synthase (glutamine-hydrolyzing) [Thermococcus barophilus MP]
 gi|315184820|gb|ADT85005.1| GMP synthase (glutamine-hydrolyzing) [Thermococcus barophilus MP]
          Length = 307

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 58/185 (31%), Gaps = 25/185 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A++  SGG DSST    A     D++  +  + G   K E E    V K   +      
Sbjct: 21  KAIIALSGGVDSSTAAILAHKAIGDKLYAVFVNTGFLRKGEPEF---VIKTFRDEFGLNL 77

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             +          L  I      + +                   +F+     +A  +  
Sbjct: 78  IYVDAQERF-FNALKGIVDPEQKRKIIG----------------KVFIDVFEEVAKEIDA 120

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++        +         I++      L    ++ +  PL  L K E  ++A+++G
Sbjct: 121 EFLIQ----GTIAPDWIESKGKIKSHHNVGGLPERLNLKLIEPLRDLYKDEVREVAKELG 176

Query: 189 GQDLV 193
             + +
Sbjct: 177 LPEKI 181


>gi|14591154|ref|NP_143230.1| GMP synthase subunit B [Pyrococcus horikoshii OT3]
 gi|13626774|sp|O59072|GUAAB_PYRHO RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
           AltName: Full=GMP synthetase
 gi|119389212|pdb|2DPL|A Chain A, Crystal Structure Of The Gmp Synthase From Pyrococcus
           Horikoshii Ot3
 gi|119389213|pdb|2DPL|B Chain B, Crystal Structure Of The Gmp Synthase From Pyrococcus
           Horikoshii Ot3
 gi|188036150|pdb|2Z0C|A Chain A, Crystal Structure Of Gmp Synthetase Ph1347 From Pyrococcus
           Horikoshii Ot3
 gi|188036151|pdb|2Z0C|B Chain B, Crystal Structure Of Gmp Synthetase Ph1347 From Pyrococcus
           Horikoshii Ot3
 gi|254574796|pdb|3A4I|A Chain A, Crystal Structure Of Gmp Synthetase Ph1347 From Pyrococcus
           Horikoshii Ot3
 gi|254574797|pdb|3A4I|B Chain B, Crystal Structure Of Gmp Synthetase Ph1347 From Pyrococcus
           Horikoshii Ot3
 gi|3257770|dbj|BAA30453.1| 308aa long hypothetical GMP synthase [Pyrococcus horikoshii OT3]
          Length = 308

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 62/185 (33%), Gaps = 25/185 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A++  SGG DSST    A     DR+  +  + G   K E E    V K   +      
Sbjct: 22  KAIIALSGGVDSSTAAVLAHKAIGDRLHAVFVNTGFLRKGEPEF---VVKTFRDEFGMNL 78

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             +        + L  ++     + +                   +F+     +A ++G 
Sbjct: 79  HYVDAQDRF-FSALKGVTDPEEKRKIIG----------------RVFIEVFEEVAKKIGA 121

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++        +         I++      L  + ++ +  PL  L K E  +LA+ +G
Sbjct: 122 EYLIQ----GTIAPDWIESQGKIKSHHNVGGLPEKLNLKLIEPLRDLYKDEVRELAKFLG 177

Query: 189 GQDLV 193
             + +
Sbjct: 178 LPEKI 182


>gi|150015222|ref|YP_001307476.1| GMP synthase [Clostridium beijerinckii NCIMB 8052]
 gi|259647752|sp|A6LQ90|GUAA_CLOB8 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|149901687|gb|ABR32520.1| GMP synthase, large subunit [Clostridium beijerinckii NCIMB 8052]
          Length = 510

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 59/187 (31%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS             +  +  D+G   K E +    V KK  ++  K 
Sbjct: 216 KKVLCALSGGVDSSVAAMIVHKAIGHNLTCIFVDHGLLRKDEGDTVERVFKKEFDMNIKR 275

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +       +    LG ++  S  +     I +               +      A ++G
Sbjct: 276 VN-------VADRFLGKLAGVSDPETKRKIIGEEF-------------IRVFEEEAKKVG 315

Query: 128 -ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  +V G    D          TI++      L  +    +  PL  L K E   + ++
Sbjct: 316 QIDYLVQGTIYPDIVESGTKTSATIKSHHNVGGLPEDMQFELIEPLRELFKDEVRAVGEE 375

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 376 LGIPHKL 382


>gi|325967587|ref|YP_004243779.1| thiamine biosynthesis protein ThiI [Vulcanisaeta moutnovskia
           768-28]
 gi|323706790|gb|ADY00277.1| thiamine biosynthesis protein ThiI [Vulcanisaeta moutnovskia
           768-28]
          Length = 483

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 54/184 (29%), Gaps = 25/184 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L L SGG DS     + + R   V  L           ++    +R            
Sbjct: 176 KLLALISGGFDSPVAAWFMMRRGSYVNALFCSL----AYPIDVINFLRVSHALFSRWSIG 231

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 I+  + L              + + N    + +  R +  +     +A  +G  
Sbjct: 232 YDPRLFIIDCSSL----------ISEFRAKANPHIWSVLFKRILYEIASK--IAKSIGAL 279

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      S          + +   + +     + V+ PL+ L K +    A+ IG 
Sbjct: 280 GLVTGESLGQVSS---------QTLHNLMAIEHGIDLPVYRPLIGLDKDDIMNYARRIGT 330

Query: 190 QDLV 193
            +  
Sbjct: 331 YEES 334


>gi|169334418|ref|ZP_02861611.1| hypothetical protein ANASTE_00818 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259135|gb|EDS73101.1| hypothetical protein ANASTE_00818 [Anaerofustis stercorihominis DSM
           17244]
          Length = 384

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/178 (12%), Positives = 48/178 (26%), Gaps = 25/178 (14%)

Query: 22  STCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAI 81
                    R  +V  L F             +  ++K+ +L     D     +++ +++
Sbjct: 188 PVAGYLMNKRGMKVVGLHFH------SYPFTSMDAKEKVKDLAEVLSDYNMGINLVNISL 241

Query: 82  LGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYS 141
                         +         T +  R +I +       + L               
Sbjct: 242 TK--------IQEQIISNCEGEYLTVILRRFMIKIANRLKNKFDLKALI----------- 282

Query: 142 GYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEE 199
                     + IE        S + +  PL+   K E   +++ IG  D+     E+
Sbjct: 283 TGESLGQVASQTIEGISCTNECSALPILRPLIAFDKTEIVDISRKIGAYDISIRPYED 340


>gi|163758747|ref|ZP_02165834.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Hoeflea phototrophica DFL-43]
 gi|162284037|gb|EDQ34321.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Hoeflea phototrophica DFL-43]
          Length = 401

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 33/135 (24%), Gaps = 4/135 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS            V  ++   Y     V      C  + I +     +
Sbjct: 19  RVVVAMSGGVDSSVVAGLLAREGYDVLGVTLQLYDHGAAVHRAGACCAGQDIDDARRVCE 78

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++    A        P   V     +        A  LG 
Sbjct: 79  VLGIPHYVLD---YEKRFQEAVINPFAESYVAGETPIPCVACNQTVKFADLLATARDLGA 135

Query: 129 TNIVIGVCETDYSGY 143
             +  G      +  
Sbjct: 136 DALATGHYIRSRANP 150


>gi|331082801|ref|ZP_08331923.1| GMP synthase 2 [Lachnospiraceae bacterium 6_1_63FAA]
 gi|330400130|gb|EGG79779.1| GMP synthase 2 [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 430

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 55/184 (29%), Gaps = 20/184 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +  +     ++  +  ++G   K E E  + + +  +     +
Sbjct: 136 KKVLLALSGGVDSSVVAAMLIKAIGQQLVCVHVNHGLMRKNESESVVKIFRDELHANLIY 195

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D+           LG + + +  +     I    +       R +             G
Sbjct: 196 VDAT-------ERFLGKLENVADPEEKRKIIGGEFIRVFEEEARKL------------EG 236

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           +++      L  +    +  PL  L K E      ++
Sbjct: 237 IDFLGQGTIYPDIIESGTKTAKCVKSHHNVGGLPEDLQFELVEPLKQLFKDEVRACGIEL 296

Query: 188 GGQD 191
           G   
Sbjct: 297 GLPH 300


>gi|330446458|ref|ZP_08310110.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328490649|dbj|GAA04607.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 371

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 56/196 (28%), Gaps = 14/196 (7%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS      L +  +VE L     + +  +  C     + +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLLQQGYQVEGLFMKNWEEDDNDEYCS--AAEDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +            H +      +   +     +A            +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIPLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETD------YSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPL 172
                L    I +G                  R       ++     L  E       P+
Sbjct: 115 FADEVLEADYIAMGHYTRRSFPTAEGEKPQMLRGVDNNKDQSYFLYTLSHEQIARSLFPV 174

Query: 173 MWLKKYETWKLAQDIG 188
             L+K E  ++A++ G
Sbjct: 175 GELEKPEVRRIAEEQG 190


>gi|324503970|gb|ADY41713.1| GMP synthase [glutamine-hydrolyzing] [Ascaris suum]
          Length = 769

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 53/184 (28%), Gaps = 3/184 (1%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              L++ SGG DS+ C +        D+V  +  D G     E E  +    K+   + +
Sbjct: 311 KKVLVMVSGGVDSTVCAALMHKALGPDKVVAIHIDNGFMRYNESEGVVEALNKLNLNVKR 370

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +                       T    MK +        V    +  L     +    
Sbjct: 371 YDAFHSFICGTVTVDGVVSRPLLRTTQPEMKRKIIGDTFMRVKDCVMEELKLDKDIFLAQ 430

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G     +    +  +        T    +TA+   +     V  PL    K E  +L + 
Sbjct: 431 GTLRPDLIESASSLASGHADTIKTHH-NDTALVRELRDLGKVIEPLKDFHKDEVRELGES 489

Query: 187 IGGQ 190
           +G  
Sbjct: 490 LGLP 493


>gi|260768141|ref|ZP_05877075.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio furnissii CIP 102972]
 gi|260616171|gb|EEX41356.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio furnissii CIP 102972]
          Length = 372

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 52/194 (26%), Gaps = 11/194 (5%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           N         ++  SGG DSS        +  +VE L     + +  E  C     + + 
Sbjct: 4   NRNANSQKKVIVGMSGGVDSSVSAYLLQQQGYQVEGLFMKNWEEDDNEEYC--TAAEDLA 61

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +            H +      +   +     +A            +  + I F  F   
Sbjct: 62  DAQAVCDKLGIHLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEF 119

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDT-------IRAIETAINLGMESHVTVHTPLMW 174
               L    I +G            +                   LG E       P+  
Sbjct: 120 ADEVLDADYIAMGHYVRRTFPEHGEKPQMLRGLDGNKDQSYFLYTLGHEQVARSLFPVGE 179

Query: 175 LKKYETWKLAQDIG 188
           L+K E  ++A++ G
Sbjct: 180 LEKPEVRRIAEEQG 193


>gi|237802284|ref|ZP_04590745.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331025141|gb|EGI05197.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 484

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 57/183 (31%), Gaps = 29/183 (15%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWKD 69
           L+L SGG DS+      + R        F+ G R      +E    + KK          
Sbjct: 183 LVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAHELGVMEVAHFIWKKYG-------- 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     +    +  S   + V  +I      +        + L  A+ +A RL I 
Sbjct: 235 ----------SSQRVLFVSVPFEEVLGEILQKVDNSHMGVVLKRMMLRAASAVADRLEID 284

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G   +  +         I A    +         V  PL+   K +   LA +IG 
Sbjct: 285 VLVTGEAISQVASQTLPNLSLIDAATDKL---------VLRPLVATHKQDIVDLATEIGT 335

Query: 190 QDL 192
            D 
Sbjct: 336 ADF 338


>gi|260587030|ref|ZP_05852943.1| GMP synthase domain protein [Blautia hansenii DSM 20583]
 gi|260542520|gb|EEX23089.1| GMP synthase domain protein [Blautia hansenii DSM 20583]
          Length = 430

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 55/184 (29%), Gaps = 20/184 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +  +     ++  +  ++G   K E E  + + +  +     +
Sbjct: 136 KKVLLALSGGVDSSVVAAMLIKAIGQQLVCVHVNHGLMRKNESESVVKIFRDELHANLIY 195

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D+           LG + + +  +     I    +       R +             G
Sbjct: 196 VDAT-------ERFLGKLENVADPEEKRKIIGGEFIRVFEEEARKL------------EG 236

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           +++      L  +    +  PL  L K E      ++
Sbjct: 237 IDFLGQGTIYPDIIESGTKTAKCVKSHHNVGGLPEDLQFELVEPLKQLFKDEVRACGIEL 296

Query: 188 GGQD 191
           G   
Sbjct: 297 GLPH 300


>gi|332529592|ref|ZP_08405548.1| tRNA-specific 2-thiouridylase MnmA [Hylemonella gracilis ATCC
           19624]
 gi|332040942|gb|EGI77312.1| tRNA-specific 2-thiouridylase MnmA [Hylemonella gracilis ATCC
           19624]
          Length = 386

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 50/196 (25%), Gaps = 12/196 (6%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D   +    ++  SGG DS+        +   V  +     + +     C   V     +
Sbjct: 2   DKSNRGQRVVVGLSGGVDSAVTAYLLKKQGHDVVGIFMKNWEDDDDNEYCSSNV-----D 56

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
            +     +      +            +      + Q    PN  V     I        
Sbjct: 57  FVDAAAVADVIGIEIEHVNFAAEYKDRVFAEFLREYQAGRTPNPDVLCNAEIKFKAFLDH 116

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWL 175
           A RLG   I  G            +H        +         L          P+  L
Sbjct: 117 AMRLGAEKIATGHYARVRLNEKTGKHELLKGLDPSKDQSYFLHRLNQAQLSKTLFPVGEL 176

Query: 176 KKYETWKLAQDIGGQD 191
            K E  ++A +IG  +
Sbjct: 177 HKTEVRRIAAEIGLPN 192


>gi|300722006|ref|YP_003711286.1| sulfur transfer protein [Xenorhabdus nematophila ATCC 19061]
 gi|297628503|emb|CBJ89070.1| sulfur transfer protein (from cys to ThiS and from IscS to U8-tRNA)
           [Xenorhabdus nematophila ATCC 19061]
          Length = 482

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------SAHEI--GVKQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +              + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHKVRFVA-------VDFEPVVAEILEKVDDGQMGVVLKRMMVRAASKIAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I      +         +  PL+   K    KLA +IG +
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIIKLACEIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|296282975|ref|ZP_06860973.1| tRNA-specific 2-thiouridylase MnmA [Citromicrobium bathyomarinum
           JL354]
          Length = 384

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 48/184 (26%), Gaps = 7/184 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIVELMPK 66
             ++  SGG DSS   + A      V  ++   +DYG       +   C    I +    
Sbjct: 27  RIVVAMSGGVDSSVVAALAAKTGADVVGITLQLYDYG--AATGRKGACCAGDDIADARAV 84

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT--LAY 124
                   ++         S      +  +  +          G     L+  A    A 
Sbjct: 85  ADRLGIAHYVFDHESAFRESVVEQFADDYLAGRTPVPCIRCNMGPKFTDLLTMARELDAD 144

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            L   + V  V     S                          +  PL  + K +   LA
Sbjct: 145 CLATGHYVRRVMGAGGSELHRAEDAGRDQSYFLFATTQPQLDFLRFPLGGMPKSQVRALA 204

Query: 185 QDIG 188
           ++ G
Sbjct: 205 EEAG 208


>gi|332818178|ref|XP_003310107.1| PREDICTED: GMP synthase [glutamine-hydrolyzing] isoform 2 [Pan
           troglodytes]
          Length = 594

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 57/195 (29%), Gaps = 11/195 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        ++V  +  D G   K E +      KK+   +   
Sbjct: 139 KVLVLLSGGVDSTVCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 198

Query: 68  K-----DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP--NTFVPGRNIIFLVFAA 120
                  +      +           S T N+    ++      +TFV   N +      
Sbjct: 199 NAAHSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNL 258

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKY 178
                      +        S     + + I+       L         V  PL    K 
Sbjct: 259 KPEEVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKD 318

Query: 179 ETWKLAQDIGGQDLV 193
           E   L +++G  + +
Sbjct: 319 EVRILGRELGLPEEL 333


>gi|332818176|ref|XP_003310106.1| PREDICTED: GMP synthase [glutamine-hydrolyzing] isoform 1 [Pan
           troglodytes]
          Length = 693

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 57/195 (29%), Gaps = 11/195 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        ++V  +  D G   K E +      KK+   +   
Sbjct: 238 KVLVLLSGGVDSTVCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 297

Query: 68  K-----DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP--NTFVPGRNIIFLVFAA 120
                  +      +           S T N+    ++      +TFV   N +      
Sbjct: 298 NAAHSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNL 357

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKY 178
                      +        S     + + I+       L         V  PL    K 
Sbjct: 358 KPEEVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKD 417

Query: 179 ETWKLAQDIGGQDLV 193
           E   L +++G  + +
Sbjct: 418 EVRILGRELGLPEEL 432


>gi|196049679|pdb|2VXO|A Chain A, Human Gmp Synthetase In Complex With Xmp
 gi|196049680|pdb|2VXO|B Chain B, Human Gmp Synthetase In Complex With Xmp
          Length = 697

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 57/195 (29%), Gaps = 11/195 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        ++V  +  D G   K E +      KK+   +   
Sbjct: 242 KVLVLLSGGVDSTVCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 301

Query: 68  K-----DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP--NTFVPGRNIIFLVFAA 120
                  +      +           S T N+    ++      +TFV   N +      
Sbjct: 302 NAAHSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNL 361

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKY 178
                      +        S     + + I+       L         V  PL    K 
Sbjct: 362 KPEEVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKD 421

Query: 179 ETWKLAQDIGGQDLV 193
           E   L +++G  + +
Sbjct: 422 EVRILGRELGLPEEL 436


>gi|194374669|dbj|BAG62449.1| unnamed protein product [Homo sapiens]
          Length = 642

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 57/195 (29%), Gaps = 11/195 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        ++V  +  D G   K E +      KK+   +   
Sbjct: 187 KVLVLLSGGVDSTVCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 246

Query: 68  K-----DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP--NTFVPGRNIIFLVFAA 120
                  +      +           S T N+    ++      +TFV   N +      
Sbjct: 247 NAAHSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNL 306

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKY 178
                      +        S     + + I+       L         V  PL    K 
Sbjct: 307 KPEEVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKD 366

Query: 179 ETWKLAQDIGGQDLV 193
           E   L +++G  + +
Sbjct: 367 EVRILGRELGLPEEL 381


>gi|62898359|dbj|BAD97119.1| guanine monophosphate synthetase variant [Homo sapiens]
          Length = 693

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 57/195 (29%), Gaps = 11/195 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        ++V  +  D G   K E +      KK+   +   
Sbjct: 238 KVLVLLSGGVDSTVCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 297

Query: 68  K-----DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP--NTFVPGRNIIFLVFAA 120
                  +      +           S T N+    ++      +TFV   N +      
Sbjct: 298 NAAHSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNL 357

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKY 178
                      +        S     + + I+       L         V  PL    K 
Sbjct: 358 KPEEVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKD 417

Query: 179 ETWKLAQDIGGQDLV 193
           E   L +++G  + +
Sbjct: 418 EVRILGRELGLPEEL 432


>gi|15602400|ref|NP_245472.1| thiamine biosynthesis protein ThiI [Pasteurella multocida subsp.
           multocida str. Pm70]
 gi|13431925|sp|P57849|THII_PASMU RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|12720799|gb|AAK02619.1| ThiI [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 480

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W+  
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWQRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + + V        L    V   + I        A R GI  
Sbjct: 232 SASHKVRFVAINFEGVVGEILEKVDNGQMGVVLKRMMVRAASRI--------AERFGIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I     ++         V  PL+   K +   +A++IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDEASESL---------VLRPLITHDKEQIIAMAKEIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|4504035|ref|NP_003866.1| GMP synthase [glutamine-hydrolyzing] [Homo sapiens]
 gi|1708072|sp|P49915|GUAA_HUMAN RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|595410|gb|AAA60331.1| guanosine 5'-monophosphate synthetase [Homo sapiens]
 gi|15082535|gb|AAH12178.1| Guanine monphosphate synthetase [Homo sapiens]
 gi|119599147|gb|EAW78741.1| guanine monphosphate synthetase, isoform CRA_b [Homo sapiens]
 gi|124000223|gb|ABM87620.1| guanine monphosphate synthetase [synthetic construct]
 gi|157929256|gb|ABW03913.1| guanine monphosphate synthetase [synthetic construct]
 gi|158256440|dbj|BAF84193.1| unnamed protein product [Homo sapiens]
 gi|164691081|dbj|BAF98723.1| unnamed protein product [Homo sapiens]
          Length = 693

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 57/195 (29%), Gaps = 11/195 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        ++V  +  D G   K E +      KK+   +   
Sbjct: 238 KVLVLLSGGVDSTVCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 297

Query: 68  K-----DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP--NTFVPGRNIIFLVFAA 120
                  +      +           S T N+    ++      +TFV   N +      
Sbjct: 298 NAAHSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNL 357

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKY 178
                      +        S     + + I+       L         V  PL    K 
Sbjct: 358 KPEEVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKD 417

Query: 179 ETWKLAQDIGGQDLV 193
           E   L +++G  + +
Sbjct: 418 EVRILGRELGLPEEL 432


>gi|224061092|ref|XP_002187518.1| PREDICTED: guanine monphosphate synthetase [Taeniopygia guttata]
          Length = 693

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 60/198 (30%), Gaps = 13/198 (6%)

Query: 8   APSALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +   L+L SGG DS+ C +    AL+R ++V  +  D G   K E +      +K+   +
Sbjct: 236 SSKVLVLLSGGVDSTVCTALLNRALNR-EQVIAVHIDNGFMRKRESQAVEEALRKLGIHV 294

Query: 65  PKW-KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                     +    L I  +        +  + +  +      + G   + +       
Sbjct: 295 KVVNAAHSFYNGTTTLPISNEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGE 354

Query: 124 YRLGITNIV--------IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
             L    +           +                   +T +   +     V  PL   
Sbjct: 355 MNLKPEEVFLAQGTLRPDLIESASLVASGKAEVIKTHHNDTELIRKLREEGKVIEPLKDF 414

Query: 176 KKYETWKLAQDIGGQDLV 193
            K E   L +++G  + +
Sbjct: 415 HKDEVRVLGRELGLPEEL 432


>gi|157964381|ref|YP_001499205.1| tRNA-specific 2-thiouridylase MnmA [Rickettsia massiliae MTU5]
 gi|157844157|gb|ABV84658.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rickettsia massiliae MTU5]
          Length = 374

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 55/194 (28%), Gaps = 9/194 (4%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKK 59
           M ++  K  + ++  SGG DSS   +   ++   V  ++   Y     V  +   C  + 
Sbjct: 10  MINLGDKQSTIVVAMSGGVDSSAVAAMLHEQGHNVIGITLQLYDHGMAVGKKNACCAGQD 69

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           I +            ++L           S+  N          P   V     +     
Sbjct: 70  IYDAKMVANKLGIPHYVLD---YESKFKESVIDNFVDSYLQGETPLPCVRCNKSVKFRDL 126

Query: 120 ATLAYRLGITNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
              A  LG   +     V  +   + +                     E    +  PL  
Sbjct: 127 IKTARELGADKLATGHYVRKINGDNGAELYTGLDPAKDQSYFLFTTTKEQLEYLRFPLGG 186

Query: 175 LKKYETWKLAQDIG 188
           L K ET KLA   G
Sbjct: 187 LTKDETRKLASKFG 200


>gi|51595293|ref|YP_069484.1| thiamine biosynthesis protein ThiI [Yersinia pseudotuberculosis IP
           32953]
 gi|186894310|ref|YP_001871422.1| thiamine biosynthesis protein ThiI [Yersinia pseudotuberculosis
           PB1/+]
 gi|81825907|sp|Q66DV0|THII_YERPS RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|238691416|sp|B2K6U1|THII_YERPB RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|51588575|emb|CAH20183.1| thiamine biosynthesis protein thiI [Yersinia pseudotuberculosis IP
           32953]
 gi|186697336|gb|ACC87965.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
           pseudotuberculosis PB1/+]
          Length = 483

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 181 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------SAHEI--GVKQVAHYLWNR 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 232 FGSSHRVRFIAI-------DFEPVVGEILEKVEDGQMGVVLKRMMVRAASQVAERYGVQA 284

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K     LA+ IG +
Sbjct: 285 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIINLARQIGTE 335

Query: 191 DL 192
           D 
Sbjct: 336 DF 337


>gi|121613044|ref|YP_999778.1| tRNA-specific 2-thiouridylase MnmA [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|167004752|ref|ZP_02270510.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter jejuni subsp. jejuni 81-176]
 gi|166234848|sp|A1VXD7|MNMA_CAMJJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|87249047|gb|EAQ72009.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 338

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 43/176 (24%), Gaps = 10/176 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DS+       +    V          +         ++K    +      
Sbjct: 2   KILVAMSGGVDSTVTAYKLKNLGHEVIGCYMK---LHGKPNYHEENIKK----VEKVANF 54

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                HIL    L +   + +        ++   PN        I L      A  LG  
Sbjct: 55  LQIPYHILD---LQEDFKNKVYMPFVDTYKEGKTPNPCALCNRFIKLGKLLEFAKSLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            +  G      +       D  +     +    +  +      +   K E  K   
Sbjct: 112 KLATGHYARLENNLIKTAVDESKDQSYFLASADKEALKYLIFPLGEMKKEDVKKFA 167


>gi|22124919|ref|NP_668342.1| thiamine biosynthesis protein ThiI [Yersinia pestis KIM 10]
 gi|45440607|ref|NP_992146.1| thiamine biosynthesis protein ThiI [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108808658|ref|YP_652574.1| thiamine biosynthesis protein ThiI [Yersinia pestis Antiqua]
 gi|108811080|ref|YP_646847.1| thiamine biosynthesis protein ThiI [Yersinia pestis Nepal516]
 gi|145600067|ref|YP_001164143.1| thiamine biosynthesis protein ThiI [Yersinia pestis Pestoides F]
 gi|149364981|ref|ZP_01887016.1| thiamine biosynthesis protein [Yersinia pestis CA88-4125]
 gi|153948038|ref|YP_001402068.1| thiamine biosynthesis protein ThiI [Yersinia pseudotuberculosis IP
           31758]
 gi|162421286|ref|YP_001607436.1| thiamine biosynthesis protein ThiI [Yersinia pestis Angola]
 gi|165926649|ref|ZP_02222481.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
           pestis biovar Orientalis str. F1991016]
 gi|165936029|ref|ZP_02224599.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
           pestis biovar Orientalis str. IP275]
 gi|166010975|ref|ZP_02231873.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
           pestis biovar Antiqua str. E1979001]
 gi|166212987|ref|ZP_02239022.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
           pestis biovar Antiqua str. B42003004]
 gi|167399413|ref|ZP_02304937.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
           pestis biovar Antiqua str. UG05-0454]
 gi|167421633|ref|ZP_02313386.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
           pestis biovar Orientalis str. MG05-1020]
 gi|167423450|ref|ZP_02315203.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
           pestis biovar Mediaevalis str. K1973002]
 gi|170025467|ref|YP_001721972.1| thiamine biosynthesis protein ThiI [Yersinia pseudotuberculosis
           YPIII]
 gi|218930203|ref|YP_002348078.1| thiamine biosynthesis protein ThiI [Yersinia pestis CO92]
 gi|229838778|ref|ZP_04458937.1| sulfur transfer protein [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229896068|ref|ZP_04511238.1| sulfur transfer protein [Yersinia pestis Pestoides A]
 gi|229899346|ref|ZP_04514489.1| sulfur transfer protein [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229901307|ref|ZP_04516429.1| sulfur transfer protein [Yersinia pestis Nepal516]
 gi|270489499|ref|ZP_06206573.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
           pestis KIM D27]
 gi|20140626|sp|Q8ZC49|THII_YERPE RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|123072664|sp|Q1C4J3|THII_YERPA RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|123246671|sp|Q1CL83|THII_YERPN RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|189030673|sp|A7FLE0|THII_YERP3 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|189030674|sp|A4TPF8|THII_YERPP RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|238687255|sp|A9QZR9|THII_YERPG RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|238688408|sp|B1JID5|THII_YERPY RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|21957756|gb|AAM84593.1|AE013704_10 putative oxidoreductase [Yersinia pestis KIM 10]
 gi|45435464|gb|AAS61023.1| thiamine biosynthesis protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|108774728|gb|ABG17247.1| thiamine biosynthesis protein [Yersinia pestis Nepal516]
 gi|108780571|gb|ABG14629.1| thiamine biosynthesis protein [Yersinia pestis Antiqua]
 gi|115348814|emb|CAL21768.1| thiamine biosynthesis protein [Yersinia pestis CO92]
 gi|145211763|gb|ABP41170.1| thiamine biosynthesis protein [Yersinia pestis Pestoides F]
 gi|149291394|gb|EDM41468.1| thiamine biosynthesis protein [Yersinia pestis CA88-4125]
 gi|152959533|gb|ABS46994.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
           pseudotuberculosis IP 31758]
 gi|162354101|gb|ABX88049.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
           pestis Angola]
 gi|165916174|gb|EDR34781.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
           pestis biovar Orientalis str. IP275]
 gi|165921577|gb|EDR38774.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
           pestis biovar Orientalis str. F1991016]
 gi|165989975|gb|EDR42276.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
           pestis biovar Antiqua str. E1979001]
 gi|166205774|gb|EDR50254.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
           pestis biovar Antiqua str. B42003004]
 gi|166960552|gb|EDR56573.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
           pestis biovar Orientalis str. MG05-1020]
 gi|167051917|gb|EDR63325.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
           pestis biovar Antiqua str. UG05-0454]
 gi|167057620|gb|EDR67366.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
           pestis biovar Mediaevalis str. K1973002]
 gi|169752001|gb|ACA69519.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
           pseudotuberculosis YPIII]
 gi|229681236|gb|EEO77330.1| sulfur transfer protein [Yersinia pestis Nepal516]
 gi|229687748|gb|EEO79821.1| sulfur transfer protein [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229695144|gb|EEO85191.1| sulfur transfer protein [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229700991|gb|EEO89020.1| sulfur transfer protein [Yersinia pestis Pestoides A]
 gi|270338003|gb|EFA48780.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
           pestis KIM D27]
          Length = 483

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 181 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------SAHEI--GVKQVAHYLWNR 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 232 FGSSHRVRFIAI-------DFEPVVGEILEKVEDGQMGVVLKRMMVRAASQVAERYGVQA 284

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K     LA+ IG +
Sbjct: 285 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIINLARQIGTE 335

Query: 191 DL 192
           D 
Sbjct: 336 DF 337


>gi|305432523|ref|ZP_07401685.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter coli JV20]
 gi|304444562|gb|EFM37213.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter coli JV20]
          Length = 338

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 43/176 (24%), Gaps = 10/176 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DS+       +    V          +         ++K    +      
Sbjct: 2   KILVAMSGGVDSTVTAYKLKNLGHEVIGCYMK---LHGKPNYHEENIKK----VEKVANF 54

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                HIL    L +   + +        ++   PN        I L      A  LG  
Sbjct: 55  LQIPYHILD---LQEDFKNKVYMPFVDTYKEGKTPNPCALCNRFIKLGKLLEFAKSLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            +  G      +       D  +     +    +  +      +   K E  K   
Sbjct: 112 KLATGHYARLENNLIKTAVDESKDQSYFLASADKEALKYLIFPLGEMKKEDVKKFA 167


>gi|262394626|ref|YP_003286480.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio sp. Ex25]
 gi|262338220|gb|ACY52015.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio sp. Ex25]
          Length = 374

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 53/195 (27%), Gaps = 13/195 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +VE L     + +  E  C     + +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYC--TAAEDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +            H +      +   +     +A            +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIHLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDT-------IRAIETAINLGMESHVTVHTPLM 173
                L    I +G            +                   L  E       P+ 
Sbjct: 115 FADEVLDADYIAMGHYVRRSFPDNGEKPAMLRGLDGNKDQSYFLYTLSHEQIGRSLFPVG 174

Query: 174 WLKKYETWKLAQDIG 188
            L+K E  ++A++ G
Sbjct: 175 DLEKPEVRRIAEEQG 189


>gi|114332296|ref|YP_748518.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Nitrosomonas eutropha C91]
 gi|122313046|sp|Q0ADM9|MNMA_NITEC RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|114309310|gb|ABI60553.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Nitrosomonas eutropha C91]
          Length = 361

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 50/197 (25%), Gaps = 11/197 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K+   ++  SGG DSS        +   V  L     + +  +  C         + +
Sbjct: 1   MNKS-RVVVGMSGGVDSSVAALLLKQQGYDVIGLFMKNWEDDDTDEYCSSR-----KDFL 54

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                +   D  L            +      + Q    PN  V   + I        A 
Sbjct: 55  DAASVADILDIPLEAVNFSAEYRERVFSLFLAEYQAGRTPNPDVLCNSEIKFKAFLDHAL 114

Query: 125 RLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            LG   I  G     +      +                 L  +       P+  L K E
Sbjct: 115 ALGADWIATGHYAQVHEINGQFQLLKGEDGNKDQSYFLYRLNQQQLSRTIFPIGHLYKRE 174

Query: 180 TWKLAQDIGGQDLVNLI 196
             K+A   G  +     
Sbjct: 175 VRKIAHKHGLPNSTKKD 191


>gi|330987257|gb|EGH85360.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 484

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 57/183 (31%), Gaps = 29/183 (15%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWKD 69
           L+L SGG DS+      + R        F+ G R      +E    + KK          
Sbjct: 183 LVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAHELGVMEVAHFIWKKYG-------- 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     +    +  S   + V  +I      +        + L  A+ +A RL I 
Sbjct: 235 ----------SSQRVLFVSVPFEEVLGEILQKVDNSHMGVVLKRMMLRAASAVADRLEID 284

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G   +  +         I A    +         V  PL+   K +   LA +IG 
Sbjct: 285 VLVTGEAISQVASQTLPNLSLIDAATDKL---------VLRPLVASHKQDIVDLATEIGT 335

Query: 190 QDL 192
            D 
Sbjct: 336 ADF 338


>gi|153003258|ref|YP_001377583.1| thiamine biosynthesis protein [Anaeromyxobacter sp. Fw109-5]
 gi|152026831|gb|ABS24599.1| thiamine biosynthesis protein [Anaeromyxobacter sp. Fw109-5]
          Length = 351

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 39/128 (30%), Gaps = 3/128 (2%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K   A+ + SGG DS+  L+    +   V+ ++F  G    +    R    +    + 
Sbjct: 1   MPKQGKAIAMISGGLDSTLALALVRRQGVEVKAVTFYTGF--CITETQRRKGGRADGAVP 58

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                    D  + +  + DIS S     +                  +  +  A  +  
Sbjct: 59  RNEALRAAADLEVDIEYV-DISGSEYLDMLVHPKYGYGANANPCVDCRVFMMRKAKEIME 117

Query: 125 RLGITNIV 132
             G   I 
Sbjct: 118 AEGADFIF 125


>gi|121535962|ref|ZP_01667756.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermosinus carboxydivorans Nor1]
 gi|121305454|gb|EAX46402.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermosinus carboxydivorans Nor1]
          Length = 364

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 58/193 (30%), Gaps = 11/193 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL- 63
           +   P  ++  SGG DSS   +  + +   V  ++    + +  E++        +  + 
Sbjct: 1   MGAKPRVVVAMSGGVDSSLTAALLVHQGYDVIGVTMQIWENDLPEIDPEHRGCCSLSAVN 60

Query: 64  -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
              +  D LG  + +      ++   ++      +      PN  +     +        
Sbjct: 61  DARRVADKLGIPYYV--LNFREMFQETVVDYFIREYAAGKTPNPCIACNRYVKFEGLLQK 118

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWL 175
           A  L    +  G            R+        T        +L   +      PL   
Sbjct: 119 ALALDAQYVATGHYARIEYDKGRGRYILRKGVDRTKDQSYALYHLNQHTLRHFLMPLGEY 178

Query: 176 KKYETWKLAQDIG 188
            K +T ++A+  G
Sbjct: 179 TKVQTRQMARQFG 191


>gi|269977689|ref|ZP_06184653.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mobiluncus mulieris 28-1]
 gi|269934117|gb|EEZ90687.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mobiluncus mulieris 28-1]
          Length = 394

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/194 (10%), Positives = 44/194 (22%), Gaps = 4/194 (2%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR----NKVELECRLCVRKKIVE 62
            +   ++  SGG DS+   +  L++   V        +             L   +K+  
Sbjct: 1   MSKKVIIGLSGGVDSAVAAARLLEQGYDVHAFFMKLEESDCDGEDNPTAQALADARKVAA 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
            +    +      ++     G I+         +        N       ++        
Sbjct: 61  YLGIPPEKFHVWELVDRFERGVITPFVEAYASGLTPNPCVRCNRVFKFGYVVERALREGF 120

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
            Y        +      +        +  ++   A          +        K ET  
Sbjct: 121 DYVATGHYACLDHIGDGFRLRRGASLEKDQSYVLAGARAEMLAHAIFPLFDVRDKAETRS 180

Query: 183 LAQDIGGQDLVNLI 196
            AQ  G        
Sbjct: 181 EAQRRGLPVAHKRD 194


>gi|57237061|ref|YP_178073.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter jejuni RM1221]
 gi|86149727|ref|ZP_01067957.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|86151459|ref|ZP_01069674.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter jejuni subsp. jejuni 260.94]
 gi|86154052|ref|ZP_01072253.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|88597704|ref|ZP_01100937.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter jejuni subsp. jejuni 84-25]
 gi|148926860|ref|ZP_01810538.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter jejuni subsp. jejuni CG8486]
 gi|205356437|ref|ZP_03223201.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter jejuni subsp. jejuni CG8421]
 gi|218561738|ref|YP_002343517.1| tRNA-specific 2-thiouridylase MnmA [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|14195288|sp|Q9PJ66|MNMA_CAMJE RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|71658012|sp|Q5HXB2|MNMA_CAMJR RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|57165865|gb|AAW34644.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter jejuni RM1221]
 gi|85839995|gb|EAQ57254.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|85841806|gb|EAQ59053.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85842466|gb|EAQ59680.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|88190008|gb|EAQ93984.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112359444|emb|CAL34227.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter jejuni subsp. jejuni NCTC 11168]
 gi|145844437|gb|EDK21545.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter jejuni subsp. jejuni CG8486]
 gi|205345624|gb|EDZ32263.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter jejuni subsp. jejuni CG8421]
 gi|315057493|gb|ADT71822.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter jejuni subsp. jejuni S3]
 gi|315929157|gb|EFV08382.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter jejuni subsp. jejuni 305]
          Length = 338

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 43/176 (24%), Gaps = 10/176 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DS+       +    V          +         ++K    +      
Sbjct: 2   KILVAMSGGVDSTVTAYKLKNLGHEVIGCYMK---LHGKPNYHEENIKK----VEKVANF 54

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                HIL    L +   + +        ++   PN        I L      A  LG  
Sbjct: 55  LQIPYHILD---LQEDFKNKVYMPFVDTYKEGKTPNPCALCNRFIKLGKLLEFAKSLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            +  G      +       D  +     +    +  +      +   K E  K   
Sbjct: 112 KLATGHYARLENNLIKTAVDESKDQSYFLASADKEALKYLIFPLGEMKKEDVKKFA 167


>gi|315638313|ref|ZP_07893494.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter upsaliensis JV21]
 gi|315481660|gb|EFU72283.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter upsaliensis JV21]
          Length = 338

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 43/176 (24%), Gaps = 10/176 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DS+            V          +         + K    +    K 
Sbjct: 2   KILVAMSGGVDSTVTAYKLKQAGHEVIGCYMK---LHGKSGYHEENIAK----VEKVAKF 54

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                HIL    L +   + +        ++   PN        I L      A  LG  
Sbjct: 55  LQIPYHILD---LQEDFKAKVYMPFINTYKEGKTPNPCALCNRFIKLGKLLEFAKSLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            +  G      +G      D  +     +    +  +      +   K E  K   
Sbjct: 112 KLATGHYARLENGCIKVAVDESKDQSYFLANANKEALQYLIFPLGEMKKEDVKKFA 167


>gi|294139896|ref|YP_003555874.1| thiamine biosynthesis protein ThiI [Shewanella violacea DSS12]
 gi|293326365|dbj|BAJ01096.1| thiamine biosynthesis protein ThiI [Shewanella violacea DSS12]
          Length = 484

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 62/196 (31%), Gaps = 27/196 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVEL 63
           +      L L SGG DS       + R  R     F+ G   +++           + ++
Sbjct: 176 MATQEDVLSLISGGFDSGVSSYQFIKRGSRTHYCFFNLGGDQHEIG----------VKQV 225

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                   GE H +          S     V  +I +             + +  A  +A
Sbjct: 226 AYHLWQKYGESHKVKFI-------SVPFDPVVTEILEKIDNGQMGVILKRMMMRAATKIA 278

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            ++GI  +V G      S       + I      +         +  PL+ + K +   L
Sbjct: 279 NKMGIQALVTGEAMGQVSSQTLTNLNVIDRCTEQL---------ILRPLIAMDKQDIINL 329

Query: 184 AQDIGGQDLVNLILEE 199
           ++ IG +DL   I E 
Sbjct: 330 SRVIGTEDLSKSIPEY 345


>gi|294504903|ref|YP_003568965.1| thiamine biosynthesis protein [Yersinia pestis Z176003]
 gi|262362969|gb|ACY59690.1| thiamine biosynthesis protein [Yersinia pestis D106004]
 gi|294355362|gb|ADE65703.1| thiamine biosynthesis protein [Yersinia pestis Z176003]
          Length = 464

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 162 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------SAHEI--GVKQVAHYLWNR 212

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 213 FGSSHRVRFIAI-------DFEPVVGEILEKVEDGQMGVVLKRMMVRAASQVAERYGVQA 265

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K     LA+ IG +
Sbjct: 266 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIINLARQIGTE 316

Query: 191 DL 192
           D 
Sbjct: 317 DF 318


>gi|257437854|ref|ZP_05613609.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Faecalibacterium prausnitzii A2-165]
 gi|257199514|gb|EEU97798.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Faecalibacterium prausnitzii A2-165]
          Length = 371

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 51/200 (25%), Gaps = 17/200 (8%)

Query: 1   MNDIIK-----KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLC 55
           M D +      K P AL+  SGG DSS               ++    +   +       
Sbjct: 1   MRDDMTEAQNTKRPGALIAMSGGVDSSVAAWLMQQAGYDCTGITMRLTRNETLGQSGFHT 60

Query: 56  VR--KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
               K I +             +L            + +      +    PN  +     
Sbjct: 61  CCSEKDIEDAAEVAFAMDIPYEVLD---FTADFREKIIEKFIRVYEMGGTPNPCIDCNRY 117

Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHV 166
           +        A   G+  +V G            R        +         NL  E   
Sbjct: 118 MKFDHLLRWAESHGMEYVVTGHYARVEQDEATGRWLLKKGLDEGKDQSYVLYNLTQEQLA 177

Query: 167 TVHTPLMWLKKYETWKLAQD 186
            V  PL  L K E  ++A+ 
Sbjct: 178 HVRLPLGGLHKAEVREIAEK 197


>gi|157828286|ref|YP_001494528.1| tRNA-specific 2-thiouridylase MnmA [Rickettsia rickettsii str.
           'Sheila Smith']
 gi|166235079|sp|A8GRJ5|MNMA_RICRS RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205822057|sp|B0BWZ7|MNMA_RICRO RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|157800767|gb|ABV76020.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rickettsia rickettsii str. 'Sheila Smith']
          Length = 365

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 55/194 (28%), Gaps = 9/194 (4%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKK 59
           M ++  K  + ++  SGG DSS   +   ++   V  ++   Y     V  +   C  + 
Sbjct: 1   MINLGAKQSTIVVAMSGGVDSSAVAAMLNEQGHNVIGITLQLYDHGMAVGKKNACCAGQD 60

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           I +            ++L           S+  N          P   V     +     
Sbjct: 61  IYDAKMVANKLGIPHYVLD---YESKFKESVIDNFVDSYLQGETPLPCVQCNKSVKFRDL 117

Query: 120 ATLAYRLGITNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
              A  LG   +     V  +   + +                     E    +  PL  
Sbjct: 118 IKTARELGADKLATGHYVRKINGDNGAELHTGLDPAKDQSYFLFTTTKEQLEYLRFPLGG 177

Query: 175 LKKYETWKLAQDIG 188
           L K ET KLA   G
Sbjct: 178 LTKGETRKLASKFG 191


>gi|165932990|ref|YP_001649779.1| tRNA-specific 2-thiouridylase MnmA [Rickettsia rickettsii str.
           Iowa]
 gi|165908077|gb|ABY72373.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rickettsia rickettsii str. Iowa]
          Length = 370

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 55/194 (28%), Gaps = 9/194 (4%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKK 59
           M ++  K  + ++  SGG DSS   +   ++   V  ++   Y     V  +   C  + 
Sbjct: 6   MINLGAKQSTIVVAMSGGVDSSAVAAMLNEQGHNVIGITLQLYDHGMAVGKKNACCAGQD 65

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           I +            ++L           S+  N          P   V     +     
Sbjct: 66  IYDAKMVANKLGIPHYVLD---YESKFKESVIDNFVDSYLQGETPLPCVQCNKSVKFRDL 122

Query: 120 ATLAYRLGITNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
              A  LG   +     V  +   + +                     E    +  PL  
Sbjct: 123 IKTARELGADKLATGHYVRKINGDNGAELHTGLDPAKDQSYFLFTTTKEQLEYLRFPLGG 182

Query: 175 LKKYETWKLAQDIG 188
           L K ET KLA   G
Sbjct: 183 LTKGETRKLASKFG 196


>gi|16081205|ref|NP_393503.1| hypothetical protein Ta0024 [Thermoplasma acidophilum DSM 1728]
 gi|10639171|emb|CAC11173.1| hypothetical protein [Thermoplasma acidophilum]
          Length = 477

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/228 (13%), Positives = 61/228 (26%), Gaps = 22/228 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +     ++ SGG++S T      +    V  + F+    +    +      KK    + K
Sbjct: 155 ERNRVAVMSSGGKESLTTFGMLREIGADVFPVFFNESGGHWKTAKIAYDYMKKNYSNVHK 214

Query: 67  WKDSLGEDHIL-----PLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
              ++   +       P+    +I  ++ +  V M I    + +             A  
Sbjct: 215 VWSNVDRFYSFMNGHMPMLDQKEIRKTADSYPVQMFIFPVYVFSMLPYVIKYGIGNIALG 274

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
             +   I        +  Y  Y           +    +GM   V      ++    E  
Sbjct: 275 DEFDDPIYQEKYRGIKHFYGVYDQTNEFNDTVSDLLARIGMPVRVFSAVYPIFGTLVEKI 334

Query: 182 KLAQDIGGQDLVNLILEESHTC----YLGKRDKRYEWGYGCNSCPACY 225
            +            +L    +C    Y G+          C  C  C 
Sbjct: 335 LV-------KRYPELLRIQRSCHLCHYEGEEV------VPCGRCTKCL 369


>gi|13540904|ref|NP_110592.1| metal-binding protein containing [Thermoplasma volcanium GSS1]
 gi|14324286|dbj|BAB59214.1| hypothetical protein [Thermoplasma volcanium GSS1]
          Length = 466

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/220 (9%), Positives = 51/220 (23%), Gaps = 12/220 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++L SGG++S        +    V  + F+    +    +          E + +   
Sbjct: 149 KVIVLSSGGKESLLTFGILKEIGAVVYPVFFNESGAHWKTAKVAYDYFSSKYENVLRVWS 208

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++   +      L  +    + +          +   ++       + +       LG  
Sbjct: 209 NVDRFYSFVNRHLKILDQDEIRRKADSYPVQMFIFPVYIFSVLPYVIKYGIG-NIALGDE 267

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                  E  +                           +H  +     Y  +    +   
Sbjct: 268 LDDPIYEEPYHGIKHYYGVYDQTNDFNLTLTSFLREYGIHCKVFSAV-YPIFGTLVEKIL 326

Query: 190 QDLVNLILEESHTC----YLGKRDKRYEWGYGCNSCPACY 225
               N +     +C    Y G           C +C  C 
Sbjct: 327 VQRYNDLFRVQRSCHLCHYEGGDV------KPCGTCSKCL 360


>gi|167624988|ref|YP_001675282.1| thiamine biosynthesis protein ThiI [Shewanella halifaxensis
           HAW-EB4]
 gi|189030649|sp|B0TQ31|THII_SHEHH RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|167355010|gb|ABZ77623.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
           halifaxensis HAW-EB4]
          Length = 484

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 61/196 (31%), Gaps = 27/196 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVEL 63
           +      L L SGG DS       + R  R     F+ G   +++           + ++
Sbjct: 176 MATQEDVLSLISGGFDSGVSSYQFIKRGSRTHYCFFNLGGDQHEIG----------VKQV 225

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                   GE H +          S     V  +I +             + +  A  +A
Sbjct: 226 AYHLWQKYGESHKVKFI-------SVPFDPVVQEILERIDNGQMGVILKRMMMRAATRVA 278

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            ++GI  +V G      S       + I      +         +  PL+ + K +   L
Sbjct: 279 QKMGIQALVTGEAMGQVSSQTLTNLNVIDRCTEQL---------ILRPLIAMDKQDIINL 329

Query: 184 AQDIGGQDLVNLILEE 199
           ++ IG +D    I E 
Sbjct: 330 SRQIGTEDFAKSIPEY 345


>gi|330807046|ref|YP_004351508.1| thiamine biosynthesis protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375154|gb|AEA66504.1| Putative thiamine biosynthesis protein [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 484

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 54/183 (29%), Gaps = 29/183 (15%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWKD 69
           L+L SGG DS+      + R        F+ G R      +E    + KK          
Sbjct: 183 LVLMSGGFDSTVAAYQIMRRGLMSHFCFFNLGGRAHELGVMEVAHFIWKKYGSSQRVI-- 240

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                             S   + V  +I      +        + L  A+ +A RL I 
Sbjct: 241 ----------------FVSVPFEEVLGEILGKVDNSHMGVILKRMMLRAASRIADRLQID 284

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G   +  S         I  +   +         V  PL+   K +    A +IG 
Sbjct: 285 ALVTGEAISQVSSQTLPNLSVIDCVTEKL---------VLRPLIASHKQDIIDQANEIGT 335

Query: 190 QDL 192
            + 
Sbjct: 336 AEF 338


>gi|193215134|ref|YP_001996333.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chloroherpeton thalassium ATCC 35110]
 gi|193088611|gb|ACF13886.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chloroherpeton thalassium ATCC 35110]
          Length = 365

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 42/191 (21%), Gaps = 13/191 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-----NKVELECRLCVRKKIV 61
                ++  SGG DSS       +    V  ++    ++     N  E +  L    +  
Sbjct: 1   MKKKVIVGMSGGVDSSVAACLLAEEGFEVIGVTLHTWEKLPKTNNDSEEQNALSPTHEHE 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           E              +              K+  +  +  N             L     
Sbjct: 61  EAKQIAAAKGFLHFTIDFREAFQREVIDYFKSEYLLGRTPNPCVICNTKIKWQAL---LQ 117

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDT-----IRAIETAINLGMESHVTVHTPLMWLK 176
            A R G   I  G            R                 L  E       PL    
Sbjct: 118 EAKRHGAAYIATGHYARVAKQEGRFRLLQGCDASKDQSYVLWGLSQEILEKARFPLADYT 177

Query: 177 KYETWKLAQDI 187
           K E   LA+  
Sbjct: 178 KDEVRALARKY 188


>gi|126736443|ref|ZP_01752184.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Roseobacter sp. CCS2]
 gi|126713981|gb|EBA10851.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Roseobacter sp. CCS2]
          Length = 379

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/186 (11%), Positives = 45/186 (24%), Gaps = 10/186 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +   +    V  ++   Y     +  +   C  + I +     +
Sbjct: 20  RVVVAMSGGVDSSVVAAKLAEEGYDVVGVTLQLYDHGAALAKKGACCAGRDIHDARRVAE 79

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +     ++L           ++    A        P   +     +        A  L  
Sbjct: 80  EMGFPHYVLDYEN---TFREAVMDEFADSYLGGATPVPCIRCNERVKFKDLLETAKDLDA 136

Query: 129 ------TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
                   I   +       +        ++         +             K ET  
Sbjct: 137 DCMATGHYIQRMMGANGAELHSAADPTKDQSYFLFSTTQDQLDYLRFPLGHHASKEETRA 196

Query: 183 LAQDIG 188
           LA   G
Sbjct: 197 LAAKYG 202


>gi|84686908|ref|ZP_01014792.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84665105|gb|EAQ11585.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhodobacterales bacterium HTCC2654]
          Length = 381

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 49/186 (26%), Gaps = 10/186 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +        V  ++   Y     +  +   C    I +     +
Sbjct: 22  RVVVAMSGGVDSSVVAAKLKREGYDVIGVTLQLYDHGAALAKKGACCAGVDIHDARRVAE 81

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +     ++L    +      ++ +  A        P   +     +        A  L  
Sbjct: 82  EMGFPHYVLDYENI---FREAVIEEFADSYLGGATPVPCIRCNERVKFKDLLATAKDLDA 138

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIET----AINLGMESHVTVHTPLMWL--KKYETWK 182
             +  G     + G                   +       ++     +     K ET  
Sbjct: 139 DCMATGHYIQRFDGDAGPELHRAADANRDQSYFLFSTTPEQLSFLRFPLGHLKTKDETRA 198

Query: 183 LAQDIG 188
           LA++ G
Sbjct: 199 LAREFG 204


>gi|119386805|ref|YP_917860.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Paracoccus denitrificans PD1222]
 gi|205816904|sp|A1B9H0|MNMA_PARDP RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|119377400|gb|ABL72164.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Paracoccus denitrificans PD1222]
          Length = 389

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 48/186 (25%), Gaps = 10/186 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +    +   V  ++   Y     +  +   C  + I +     +
Sbjct: 30  RVVVAMSGGVDSSVVAAMLAAQGYDVIGVTLQLYDHGAALAKKGACCAGQDIHDARRVAE 89

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL-- 126
                 ++L           S+ +  A        P   +     +        A  L  
Sbjct: 90  RIGFPHYVLDYEN---KFRESVIEEFADAYLAGATPVPCIRCNERVKFRDLLQTARELDA 146

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL----KKYETWK 182
                   +         +       A + +  L   +   +      L     K ET  
Sbjct: 147 DCMATGHYIRRLMGPKGAELHMAADPARDQSYFLFSTTQEQLDFLRFPLGGLASKAETRA 206

Query: 183 LAQDIG 188
           LA   G
Sbjct: 207 LAAQYG 212


>gi|238918997|ref|YP_002932511.1| thiamine biosynthesis protein ThiI [Edwardsiella ictaluri 93-146]
 gi|259518550|sp|C5BCI2|THII_EDWI9 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|238868566|gb|ACR68277.1| thiamine biosynthesis/tRNA modification protein ThiI, putative
           [Edwardsiella ictaluri 93-146]
          Length = 482

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 57/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------SAHEI--GVKQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +           V  +I +             + +  A+ +A R GI  
Sbjct: 231 FGSSHRVRFVAI-------DFAPVVGEILEKVDDGQMGVVLKRMMVRAASRVAERYGIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         V  PL+   K    +LA++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDGVSDTL---------VLRPLIAHDKEHIIRLARNIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|71083529|ref|YP_266248.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Pelagibacter ubique HTCC1062]
 gi|91762051|ref|ZP_01264016.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Pelagibacter ubique HTCC1002]
 gi|123646720|sp|Q4FME4|MNMA_PELUB RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|71062642|gb|AAZ21645.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Pelagibacter ubique HTCC1062]
 gi|91717853|gb|EAS84503.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Pelagibacter ubique HTCC1002]
          Length = 371

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 54/183 (29%), Gaps = 9/183 (4%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWKD 69
            ++  SGG DSST  +   +    V  ++   Y    +     + C  + I++       
Sbjct: 18  VIVAMSGGVDSSTVAAMMKNEGYNVIGITLKLYNDSKETASSKQCCAGQDIMDAKRVADK 77

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E  IL      +     +  N      +   P   V     +        A RL   
Sbjct: 78  LKIEHKIL---YYQNKFKEGVIDNFIDSYLNGETPIPCVQCNKTVKFTDLFEEAKRLNAD 134

Query: 130 NIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            +V G      +   +                  N   +    +  PL  L K ET  +A
Sbjct: 135 ALVTGHYVKSITEKDNTDMYRGIDLNRDQSYFLFNTTKDQLNFLRFPLGNLLKDETRNIA 194

Query: 185 QDI 187
           +++
Sbjct: 195 REL 197


>gi|330829149|ref|YP_004392101.1| tRNA sulfurtransferase [Aeromonas veronii B565]
 gi|328804285|gb|AEB49484.1| tRNA sulfurtransferase [Aeromonas veronii B565]
          Length = 482

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 55/188 (29%), Gaps = 25/188 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           I      L L SGG DS       + R  RV    F+ G            +   + ++ 
Sbjct: 174 IATQEDVLSLLSGGFDSGVASFQFIKRGCRVHYCFFNLGG-------AAHEI--GVKQVA 224

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
               +  G  H +              + V  +I +             + +  AA +A 
Sbjct: 225 YHLWNRFGSSHRVRFTA-------VDFEPVVAEILEKIDNGQMGVVLKRMMMRAAAKVAD 277

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
              I  +V G C    S       + I  +   +         +  PL+   K +    A
Sbjct: 278 EFQIPALVTGECVGQVSSQTLTNLNVIDRVTDKV---------ILRPLITWDKPDIISEA 328

Query: 185 QDIGGQDL 192
           + IG  + 
Sbjct: 329 RRIGTLEF 336


>gi|117920194|ref|YP_869386.1| tRNA-specific 2-thiouridylase MnmA [Shewanella sp. ANA-3]
 gi|166235083|sp|A0KW11|MNMA_SHESA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|117612526|gb|ABK47980.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shewanella sp. ANA-3]
          Length = 372

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 53/192 (27%), Gaps = 10/192 (5%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +        ++  SGG DSS      + +  +VE L     + +  +  C     + + +
Sbjct: 5   EPTHTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDNDEYCA--AAEDLKD 62

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     + H +      +   +     +A            +  + I F  F    
Sbjct: 63  AQAVCDKLGIKLHTVN--FAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLDFA 120

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLK 176
              L    I +G                               L  E       P+  L+
Sbjct: 121 DDILDADYIAMGHYVRRRDNADGTTQMLRGVDNNKDQSYFLYTLSHEQVARSLFPVGELE 180

Query: 177 KYETWKLAQDIG 188
           K+E  ++A+ +G
Sbjct: 181 KHEVREIAKKMG 192


>gi|306817970|ref|ZP_07451707.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mobiluncus mulieris ATCC 35239]
 gi|304649238|gb|EFM46526.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mobiluncus mulieris ATCC 35239]
          Length = 394

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/194 (10%), Positives = 44/194 (22%), Gaps = 4/194 (2%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR----NKVELECRLCVRKKIVE 62
            +   ++  SGG DS+   +  L++   V        +             L   +K+  
Sbjct: 1   MSKKVIIGLSGGVDSAVAAARLLEQGYDVHAFFMKLEESDCDGEDNPTAQALADARKVAA 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
            +    +      ++     G I+         +        N       ++        
Sbjct: 61  YLGIPPEKFHVWELVDRFERGVITPFVEAYASGLTPNPCVRCNRVFKFGYVVERALREGF 120

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
            Y        +      +        +  ++   A          +        K ET  
Sbjct: 121 DYVATGHYACLDHIGDGFRLRRGASLEKDQSYVLAGARAEMLAHAIFPLFDVRDKAETRA 180

Query: 183 LAQDIGGQDLVNLI 196
            AQ  G        
Sbjct: 181 EAQRRGLPVAHKRD 194


>gi|301022586|ref|ZP_07186458.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 69-1]
 gi|300397467|gb|EFJ81005.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli MS 69-1]
          Length = 482

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARHIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|262306075|gb|ACY45630.1| gln amidotransferase [Hexagenia limbata]
          Length = 197

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 2/63 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +   LLL SGG DS+ C +      R D+V  +  D G   K E +      +K+   + 
Sbjct: 43  SNKVLLLVSGGVDSTVCAALLHKALREDQVIAVHIDNGFMRKGESQKVEQSLEKLGLHLK 102

Query: 66  KWK 68
              
Sbjct: 103 VVN 105


>gi|301780780|ref|XP_002925806.1| PREDICTED: GMP synthase [glutamine-hydrolyzing]-like [Ailuropoda
           melanoleuca]
          Length = 699

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 57/195 (29%), Gaps = 11/195 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        D+V  +  D G   K E +      KK+   +   
Sbjct: 244 KVLVLLSGGVDSTVCTALLNRALSQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 303

Query: 68  K-----DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP--NTFVPGRNIIFLVFAA 120
                  +      +           S T N+    ++      +TFV   N +      
Sbjct: 304 NAAHSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNL 363

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKY 178
                      +        S     + + I+       L         V  PL    K 
Sbjct: 364 KPEEVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKD 423

Query: 179 ETWKLAQDIGGQDLV 193
           E   L +++G  + +
Sbjct: 424 EVRILGRELGLPEEL 438


>gi|281343173|gb|EFB18757.1| hypothetical protein PANDA_015366 [Ailuropoda melanoleuca]
          Length = 784

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 57/195 (29%), Gaps = 11/195 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        D+V  +  D G   K E +      KK+   +   
Sbjct: 329 KVLVLLSGGVDSTVCTALLNRALSQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 388

Query: 68  K-----DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP--NTFVPGRNIIFLVFAA 120
                  +      +           S T N+    ++      +TFV   N +      
Sbjct: 389 NAAHSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNL 448

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKY 178
                      +        S     + + I+       L         V  PL    K 
Sbjct: 449 KPEEVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKD 508

Query: 179 ETWKLAQDIGGQDLV 193
           E   L +++G  + +
Sbjct: 509 EVRILGRELGLPEEL 523


>gi|153951834|ref|YP_001397317.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter jejuni subsp. doylei 269.97]
 gi|166234847|sp|A7H1D7|MNMA_CAMJD RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|152939280|gb|ABS44021.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter jejuni subsp. doylei 269.97]
          Length = 338

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 43/176 (24%), Gaps = 10/176 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DS+       +    V          +         ++K    +      
Sbjct: 2   KILVAMSGGVDSTVTAYKLKNLGHEVIGCYMK---LHGKPNYHEENIKK----VEKVANF 54

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                HIL    L +   + +        ++   PN        I L      A  LG  
Sbjct: 55  LQIPYHILD---LQEDFKNKVYMPFVDTYKEGKTPNPCALCNRFIKLGKLLEFAKNLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            +  G      +       D  +     +    +  +      +   K E  K   
Sbjct: 112 KLATGHYARLENNLIKTAVDESKDQSYFLASADKEALKYLIFPLGEMKKEDVKKFA 167


>gi|73990462|ref|XP_866454.1| PREDICTED: similar to GMP synthase [glutamine-hydrolyzing]
           (Glutamine amidotransferase) (GMP synthetase) isoform 7
           [Canis familiaris]
          Length = 700

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 57/195 (29%), Gaps = 11/195 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        D+V  +  D G   K E +      KK+   +   
Sbjct: 245 KVLVLLSGGVDSTVCTALLNRALSQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 304

Query: 68  K-----DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP--NTFVPGRNIIFLVFAA 120
                  +      +           S T N+    ++      +TFV   N +      
Sbjct: 305 NAAHSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNL 364

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKY 178
                      +        S     + + I+       L         V  PL    K 
Sbjct: 365 KPEEVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKD 424

Query: 179 ETWKLAQDIGGQDLV 193
           E   L +++G  + +
Sbjct: 425 EVRILGRELGLPEEL 439


>gi|73990454|ref|XP_866405.1| PREDICTED: similar to GMP synthase [glutamine-hydrolyzing]
           (Glutamine amidotransferase) (GMP synthetase) isoform 3
           [Canis familiaris]
          Length = 727

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 57/195 (29%), Gaps = 11/195 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        D+V  +  D G   K E +      KK+   +   
Sbjct: 245 KVLVLLSGGVDSTVCTALLNRALSQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 304

Query: 68  K-----DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP--NTFVPGRNIIFLVFAA 120
                  +      +           S T N+    ++      +TFV   N +      
Sbjct: 305 NAAHSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNL 364

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKY 178
                      +        S     + + I+       L         V  PL    K 
Sbjct: 365 KPEEVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKD 424

Query: 179 ETWKLAQDIGGQDLV 193
           E   L +++G  + +
Sbjct: 425 EVRILGRELGLPEEL 439


>gi|73990456|ref|XP_866417.1| PREDICTED: similar to GMP synthase [glutamine-hydrolyzing]
           (Glutamine amidotransferase) (GMP synthetase) isoform 4
           [Canis familiaris]
          Length = 724

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 57/195 (29%), Gaps = 11/195 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        D+V  +  D G   K E +      KK+   +   
Sbjct: 243 KVLVLLSGGVDSTVCTALLNRALSQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 302

Query: 68  K-----DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP--NTFVPGRNIIFLVFAA 120
                  +      +           S T N+    ++      +TFV   N +      
Sbjct: 303 NAAHSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNL 362

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKY 178
                      +        S     + + I+       L         V  PL    K 
Sbjct: 363 KPEEVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKD 422

Query: 179 ETWKLAQDIGGQDLV 193
           E   L +++G  + +
Sbjct: 423 EVRILGRELGLPEEL 437


>gi|57103704|ref|XP_534316.1| PREDICTED: similar to GMP synthase [glutamine-hydrolyzing]
           (Glutamine amidotransferase) (GMP synthetase) isoform 1
           [Canis familiaris]
 gi|73990451|ref|XP_852817.1| PREDICTED: similar to GMP synthase [glutamine-hydrolyzing]
           (Glutamine amidotransferase) (GMP synthetase) isoform 2
           [Canis familiaris]
          Length = 698

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 57/195 (29%), Gaps = 11/195 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        D+V  +  D G   K E +      KK+   +   
Sbjct: 243 KVLVLLSGGVDSTVCTALLNRALSQDQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 302

Query: 68  K-----DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP--NTFVPGRNIIFLVFAA 120
                  +      +           S T N+    ++      +TFV   N +      
Sbjct: 303 NAAHSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNL 362

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKY 178
                      +        S     + + I+       L         V  PL    K 
Sbjct: 363 KPEEVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKD 422

Query: 179 ETWKLAQDIGGQDLV 193
           E   L +++G  + +
Sbjct: 423 EVRILGRELGLPEEL 437


>gi|222823281|ref|YP_002574854.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter lari RM2100]
 gi|254811447|sp|B9KEW8|MNMA_CAMLR RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|222538502|gb|ACM63603.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter lari RM2100]
          Length = 338

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/176 (14%), Positives = 44/176 (25%), Gaps = 10/176 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DS+            +          +         ++K    +      
Sbjct: 2   KILVAMSGGVDSTVTAYKLKQAGHEIIGCYMK---LHGKPNYHEENIQK----VEKVANF 54

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              + HIL    L +   + +        +D   PN        I L      A  LG  
Sbjct: 55  LGIKYHILD---LQEDFKNQVYMPFINTYKDGKTPNPCALCNRFIKLGKLLEFAKSLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            +  G      +G      D  +     +    +  +      +   K E  K   
Sbjct: 112 KLATGHYARIENGLIKTAFDDSKDQSYFLANADKEALEYLIFPLGEMKKEDVKKFA 167


>gi|332158560|ref|YP_004423839.1| hypothetical protein PNA2_0919 [Pyrococcus sp. NA2]
 gi|331034023|gb|AEC51835.1| hypothetical protein PNA2_0919 [Pyrococcus sp. NA2]
          Length = 302

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 23/71 (32%), Gaps = 2/71 (2%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCVRKK 59
             ++KK    L+  SGG+DS+            +E L  + G     E          + 
Sbjct: 41  YRLLKKNEKVLVAVSGGKDSAVTAYVLKKLGYNIECLHINLGIGEYSEKSEMYARKQCEL 100

Query: 60  IVELMPKWKDS 70
           I   +   +  
Sbjct: 101 IGAKLHIVRIR 111


>gi|319954152|ref|YP_004165419.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Cellulophaga algicola DSM 14237]
 gi|319422812|gb|ADV49921.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Cellulophaga algicola DSM 14237]
          Length = 396

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 38/144 (26%), Gaps = 3/144 (2%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS       ++   V  L       + V +       +   + M   +
Sbjct: 2   KKVVVGLSGGVDSSVAAYLLKEQGYEVIGLFMKNWHDDTVTISDECPWLEDSNDAMIVAE 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   +    L       +   +  +      PN  V     I       +A +LG 
Sbjct: 62  KLGIPFQTVD---LSAEYKERIVDYMFDEYAKGRTPNPDVLCNREIKFDVFMKIALQLGA 118

Query: 129 TNIVIGVCETDYSGYPDCRHDTIR 152
             +  G              +T +
Sbjct: 119 DYVATGHYCKKGIIKNSDGSETYQ 142


>gi|330340409|ref|NP_001193365.1| GMP synthase [Bos taurus]
 gi|296491166|gb|DAA33239.1| guanine monphosphate synthetase [Bos taurus]
          Length = 699

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 57/195 (29%), Gaps = 11/195 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        D+V  +  D G   K E +      +K+   +   
Sbjct: 244 KVLVLLSGGVDSTVCTALLNRALNQDQVIAVHIDNGFMRKRESQSVEEALRKLGIQVKVI 303

Query: 68  K-----DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP--NTFVPGRNIIFLVFAA 120
                  +      +           S T N+    ++      +TFV   N +      
Sbjct: 304 NAAHSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNL 363

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKY 178
                      +        S     + + I+       L         V  PL    K 
Sbjct: 364 KPEEVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKD 423

Query: 179 ETWKLAQDIGGQDLV 193
           E   L +++G  + +
Sbjct: 424 EVRILGRELGLPEEL 438


>gi|257483877|ref|ZP_05637918.1| thiamine biosynthesis protein ThiI [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|320326306|gb|EFW82359.1| thiamine biosynthesis protein ThiI [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320331695|gb|EFW87633.1| thiamine biosynthesis protein ThiI [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330872417|gb|EGH06566.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|331012032|gb|EGH92088.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 484

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 57/183 (31%), Gaps = 29/183 (15%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWKD 69
           L+L SGG DS+      + R        F+ G R      +E    + KK          
Sbjct: 183 LVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAHELGVMEVAHFIWKKYG-------- 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     +    +  S   + V  +I      +        + L  A+ +A RL I 
Sbjct: 235 ----------SSQRVLFVSVPFEEVLGEILQKVDNSHMGVVLKRMMLRAASAVADRLEID 284

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G   +  +         I A    +         V  PL+   K +   LA +IG 
Sbjct: 285 VLVTGEAISQVASQTLPNLSLIDAATDKL---------VLRPLVASHKQDIVDLATEIGT 335

Query: 190 QDL 192
            D 
Sbjct: 336 ADF 338


>gi|83405734|gb|AAI11274.1| GMPS protein [Bos taurus]
          Length = 704

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 57/195 (29%), Gaps = 11/195 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        D+V  +  D G   K E +      +K+   +   
Sbjct: 249 KVLVLLSGGVDSTVCTALLNRALNQDQVIAVHIDNGFMRKRESQSVEEALRKLGIQVKVI 308

Query: 68  K-----DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP--NTFVPGRNIIFLVFAA 120
                  +      +           S T N+    ++      +TFV   N +      
Sbjct: 309 NAAHSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNL 368

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKY 178
                      +        S     + + I+       L         V  PL    K 
Sbjct: 369 KPEEVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKD 428

Query: 179 ETWKLAQDIGGQDLV 193
           E   L +++G  + +
Sbjct: 429 EVRILGRELGLPEEL 443


>gi|331091036|ref|ZP_08339878.1| tRNA-specific 2-thiouridylase mnmA [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330405258|gb|EGG84794.1| tRNA-specific 2-thiouridylase mnmA [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 360

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 47/193 (24%), Gaps = 12/193 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ---RNKVELECRLCVRKKIVEL 63
           +    ++  SGG DSS       ++   V  ++    Q   R   E     C    + + 
Sbjct: 2   EKKKVVVGMSGGVDSSVAAHLLKEQGYDVIGVTMQIWQDEDRAIQEENGGCCGLSAVDDA 61

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      +++            +      + +    PN  +     +        +
Sbjct: 62  RRVAGQLEIPYYVMN---FKKEFKKEVIDYFIEEYRQGRTPNPCIACNRYVKWESLLKRS 118

Query: 124 YRLGITNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
             +G   I  G                              NL          P+    K
Sbjct: 119 MDIGADYIATGHYARIVKLENGRYTLKRSATLAKDQTYALYNLTQNQLSHTLMPVGEYTK 178

Query: 178 YETWKLAQDIGGQ 190
            E  ++A+ I  Q
Sbjct: 179 DEIRQIAEKIHLQ 191


>gi|149641234|ref|XP_001512299.1| PREDICTED: similar to guanosine 5-monophosphate synthetase, partial
           [Ornithorhynchus anatinus]
          Length = 631

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        D+V  +  D G   K E +      KK+   +   
Sbjct: 176 KVLVLLSGGVDSTVCTALLNRALNQDQVIAVHIDNGFMRKRESQSVEEALKKLGIRVKVV 235

Query: 68  K 68
            
Sbjct: 236 N 236


>gi|269960819|ref|ZP_06175190.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio harveyi 1DA3]
 gi|269834483|gb|EEZ88571.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio harveyi 1DA3]
          Length = 380

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/195 (12%), Positives = 49/195 (25%), Gaps = 8/195 (4%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +VE L     + +  E  C     + +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYC--TAAEDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +            H +      +   +     +A            +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIHLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
                L    I +G              +     +    L      +       L   + 
Sbjct: 115 FADEVLDADYIAMGHYVRRSFPENALPGEEQEKPQMLRGLDGNKDQSYFLYT--LSNEQI 172

Query: 181 WKLAQDIGGQDLVNL 195
            +    +G  +   +
Sbjct: 173 ARSLFPVGDLEKPEV 187


>gi|205822510|sp|Q5FR73|MNMA_GLUOX RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 361

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 54/188 (28%), Gaps = 15/188 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIVELMPK 66
             L+  SGG DSS   +    +   V   +   +D+GQ  K    C       I++    
Sbjct: 2   RILVAMSGGVDSSVVAALLKRQGHEVIGATLQLYDHGQAAKPGACCAGR---DIMDARAV 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   +++           S+ ++ A        P   V     +       +A  L
Sbjct: 59  ADRLGFPHYVID---AESRFRDSVVESFADAYARGETPVPCVACNQGVKFTDLLGMARDL 115

Query: 127 GITNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL-KKYET 180
           G   +     V  V   + +                     +    +  PL  +  K   
Sbjct: 116 GCEAMATGHYVRRVEGPEGAEMHRPVDAERDQTWFLFATTKDQLDYLRFPLGEMPDKAHV 175

Query: 181 WKLAQDIG 188
             LAQ++G
Sbjct: 176 RALAQELG 183


>gi|12483930|gb|AAG53900.1| MLL/GMPS fusion protein [Homo sapiens]
          Length = 551

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        ++V  +  D G   K E +      KK+   +   
Sbjct: 371 KVLVLLSGGVDSTVCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 430

Query: 68  K 68
            
Sbjct: 431 N 431


>gi|89069527|ref|ZP_01156871.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Oceanicola granulosus HTCC2516]
 gi|89044862|gb|EAR50952.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Oceanicola granulosus HTCC2516]
          Length = 379

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 48/186 (25%), Gaps = 6/186 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +        V  ++   Y     +  +   C  + I +     +
Sbjct: 20  RVVVAMSGGVDSSVVAAELAREGYDVVGVTLQLYDHGAALARKGACCAGRDIHDARRVAE 79

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +     ++L    +   +      +  +                   L+  A        
Sbjct: 80  EMGFPHYVLDYENVFKDAVIDEFADSYLAGATPVPCIRCNERVKFKDLLETARDLDA-DC 138

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL----KKYETWKLA 184
                 +     +  P+       A + +  L   +   +      L     K ET  LA
Sbjct: 139 MATGHYIQRKMGAHGPELHSAADAARDQSYFLFSTTPEQLAYLRFPLGHLASKAETRALA 198

Query: 185 QDIGGQ 190
              G  
Sbjct: 199 GRHGLP 204


>gi|326403958|ref|YP_004284040.1| tRNA-specific 2-thiouridylase MnmA [Acidiphilium multivorum AIU301]
 gi|325050820|dbj|BAJ81158.1| tRNA-specific 2-thiouridylase MnmA [Acidiphilium multivorum AIU301]
          Length = 345

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 37/135 (27%), Gaps = 4/135 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS       +    V  ++   Y        +   C  + I +      
Sbjct: 2   RVVVAMSGGVDSSVVAGLMHEAGHEVIGVTLQLYDHGAATSRKGACCAGQDIHDARNVAD 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 +++          +++  + A    +   P   V     +       LA  LG 
Sbjct: 62  RLGIAHYVID---AEAAFRAAVIGDFAESYAEGRTPVPCVRCNQHLKFGDLLGLARDLGA 118

Query: 129 TNIVIGVCETDYSGY 143
             +  G       G 
Sbjct: 119 EALATGHYVRREDGP 133


>gi|315607452|ref|ZP_07882448.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
 gi|315250884|gb|EFU30877.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
          Length = 443

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/224 (10%), Positives = 57/224 (25%), Gaps = 22/224 (9%)

Query: 12  LLLFSGGQDSSTCLSWALD---RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           + LFSGG DS       ++   +  ++   S       K     +  +  K  +  P   
Sbjct: 144 VNLFSGGMDSLIGAIDYMESCGKQCQIYLASHHDSIM-KGPKIDQERIITKFTQQYP--- 199

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                       I       + T +  +  +  +L    +      +      +     +
Sbjct: 200 ---------DKFIYRQPVGITPTISKELTCRSRSLMFLSIAFMVAAYKSCKVIVPENGSV 250

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
           +           +      H         +   +   + +  P  +  K E         
Sbjct: 251 SLNYPLSVSRRAACSTRTTHPLFLQSIRELLSVLSLPIIIENPYEFRTKGEMVANCL--- 307

Query: 189 GQDLVNLILEESHTCYLGKRD---KRYEWGYGCNSCPACYLRQK 229
            +  +  I+++ ++C                 C  C  C  R+ 
Sbjct: 308 NKSYLLDIVDKCNSCGKRGGHQFMPDNPHASHCGRCMPCMYRKA 351


>gi|114047179|ref|YP_737729.1| tRNA-specific 2-thiouridylase MnmA [Shewanella sp. MR-7]
 gi|122944742|sp|Q0HW33|MNMA_SHESR RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|113888621|gb|ABI42672.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shewanella sp. MR-7]
          Length = 372

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 53/192 (27%), Gaps = 10/192 (5%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +        ++  SGG DSS      + +  +VE L     + +  +  C     + + +
Sbjct: 5   EPTHTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDNDEYCA--AAEDLKD 62

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     + H +      +   +     +A            +  + I F  F    
Sbjct: 63  AQAVCDKLGIKLHTVN--FAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLDFA 120

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLK 176
              L    I +G                               L  E       P+  L+
Sbjct: 121 DDILDADYIAMGHYVRRRDNADGTTQMLRGVDNNKDQSYFLYTLSHEQVARSLFPVGELE 180

Query: 177 KYETWKLAQDIG 188
           K+E  ++A+ +G
Sbjct: 181 KHEVREIAKKMG 192


>gi|108805594|ref|YP_645531.1| thiamine biosynthesis protein [Rubrobacter xylanophilus DSM 9941]
 gi|108766837|gb|ABG05719.1| thiamine biosynthesis protein [Rubrobacter xylanophilus DSM 9941]
          Length = 502

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 67/190 (35%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL LFSGG DS       + R  RV+ + +D G     ++   L V +++   +     
Sbjct: 195 RALALFSGGFDSPVAAWRVMRRGIRVDLVVYDLGG--CGQVGQALAVARELA--LRWAPG 250

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                +++ LA              A+  + +      +  R +      + LA  LG  
Sbjct: 251 LEVRANVVDLA----------PVVSALVRRVDPRLRQILLKRAMY--RAGSILAGELGFE 298

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      S          + +         + V V  PL+   K E  + A+ IG 
Sbjct: 299 ALVTGESLGQVST---------QTLRNLAVAEEAASVPVLRPLVGSDKQEIIEAARSIGT 349

Query: 190 QDLVNLILEE 199
            D+  L+ E 
Sbjct: 350 HDVSALVKEH 359


>gi|217967082|ref|YP_002352588.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Dictyoglomus turgidum DSM 6724]
 gi|217336181|gb|ACK41974.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Dictyoglomus turgidum DSM 6724]
          Length = 343

 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 57/191 (29%), Gaps = 22/191 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +    +  SGG DSS            V  L+ +      +     +   KK+ E +  
Sbjct: 1   MSIKVAVGMSGGVDSSITAYLLKKEGYEVIGLTMN------IAYSSSIKDAKKVAEYLN- 53

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     +    L +     + K      +    PN  V    +I        A  L
Sbjct: 54  -----IPHFFVD---LKNEFEEKIIKYFVESYKHGYTPNPCVFCNKLIKFGLLLEKAKEL 105

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRA----IETAINLGMESHVTVH---TPLMWLKKYE 179
           G   +  G             +  +RA     + +  LGM +   +     PL  L K E
Sbjct: 106 GADFLSTGHYVRKVWDEERKTYLLMRAKDLKKDQSYFLGMLTQEQIKKTLFPLGELTKEE 165

Query: 180 TWKLAQDIGGQ 190
             K+A ++G  
Sbjct: 166 VRKIADELGIF 176


>gi|309776979|ref|ZP_07671949.1| GMP synthase, C- domain protein [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308915390|gb|EFP61160.1| GMP synthase, C- domain protein [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 430

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 55/183 (30%), Gaps = 20/183 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +  L     ++  +  ++G   K E E  + V +  ++    + 
Sbjct: 137 KVLLALSGGVDSSVVAALLLKAIGKQLYCVHVNHGLMRKGESESVIEVFQNQMDANLIYV 196

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D+           LG +   +  +     I    +       R +             GI
Sbjct: 197 DA-------SERFLGKLKDVAEPEQKRKIIGAEFIRVFEEEARKL------------EGI 237

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G    D           +++      L  +    +  PL  L K E      ++G
Sbjct: 238 DFLAQGTIYPDIVESGTKTAKVVKSHHNVGGLPDDLAFELVEPLRQLFKDEVRACGLELG 297

Query: 189 GQD 191
              
Sbjct: 298 LPH 300


>gi|262402513|ref|ZP_06079074.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio sp. RC586]
 gi|262351295|gb|EEZ00428.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio sp. RC586]
          Length = 371

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 55/190 (28%), Gaps = 11/190 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +  +VE L     + +  E  C     + + +   
Sbjct: 8   NSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYC--TAAEDLADAQA 65

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    H +      +   +     +A            +  + I F  F       
Sbjct: 66  VCDKLGIPLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEFADEV 123

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH-------TPLMWLKKY 178
           L    I +G            +   +R ++   +     +   H        P+  L+K 
Sbjct: 124 LDADYIAMGHYVRRTFPQNGEKPQMLRGLDNNKDQSYFLYTLSHEQVTRSLFPVGDLEKP 183

Query: 179 ETWKLAQDIG 188
           E  ++A++ G
Sbjct: 184 EVRRIAEEQG 193


>gi|115376200|ref|ZP_01463442.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
 gi|310821768|ref|YP_003954126.1| hypothetical protein STAUR_4519 [Stigmatella aurantiaca DW4/3-1]
 gi|115366773|gb|EAU65766.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
 gi|309394840|gb|ADO72299.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 293

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 65/250 (26%), Gaps = 54/250 (21%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
           M   I+   +AL+ FSGG DS+  L  A++   +R   ++         E +    +  +
Sbjct: 21  MRAAIRAHGTALVAFSGGVDSTFVLKVAVEELGERALAVTALSASVAPEEEQEARELAAR 80

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                                          T N     Q    P               
Sbjct: 81  FGARHEVL-----------------------TSNELANPQYAANPTNRCYFCKTELYDLC 117

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
                 LG   ++ G    D+  +                   E  V        L K E
Sbjct: 118 EARRQALGYAVVLDGFNADDFKDHRPGHK-----------AAQEHRVQSPLAQAGLTKEE 166

Query: 180 TWKLAQDIG---------GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
               +  +G               +    S T     R++ ++            LR+ G
Sbjct: 167 IRAWSHHLGLPTWDKPQMACLASRIPYGTSVT-----RERLFQIARA-----ESELRRMG 216

Query: 231 WMEFKEKYQD 240
           + +F+ +Y +
Sbjct: 217 FRQFRVRYHE 226


>gi|113969944|ref|YP_733737.1| tRNA-specific 2-thiouridylase MnmA [Shewanella sp. MR-4]
 gi|123029751|sp|Q0HJT7|MNMA_SHESM RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|113884628|gb|ABI38680.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shewanella sp. MR-4]
          Length = 372

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 53/192 (27%), Gaps = 10/192 (5%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +        ++  SGG DSS      + +  +VE L     + +  +  C     + + +
Sbjct: 5   EPTHTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDNDEYCA--AAEDLKD 62

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     + H +      +   +     +A            +  + I F  F    
Sbjct: 63  AQAVCDKLGIKLHTVN--FAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLDFA 120

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLK 176
              L    I +G                               L  E       P+  L+
Sbjct: 121 DDILDADYIAMGHYVRRRDNADGTTQMLRGVDNNKDQSYFLYTLSHEQVARSLFPVGELE 180

Query: 177 KYETWKLAQDIG 188
           K+E  ++A+ +G
Sbjct: 181 KHEVREIAKKMG 192


>gi|149278290|ref|ZP_01884428.1| argininosuccinate synthetase [Pedobacter sp. BAL39]
 gi|149231056|gb|EDM36437.1| argininosuccinate synthetase [Pedobacter sp. BAL39]
          Length = 397

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               +L FSGG D S  C+  A DR   V ++  + G  ++ EL+        +     
Sbjct: 1  MKKKVVLAFSGGLDTSFCCIYLAQDRGLEVHSVIVNTGGFSEEELQEIEKRAYALGVASH 60

Query: 66 KWKD 69
             D
Sbjct: 61 AVVD 64


>gi|119470125|ref|ZP_01612891.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Alteromonadales bacterium TW-7]
 gi|119446546|gb|EAW27820.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Alteromonadales bacterium TW-7]
          Length = 366

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 51/191 (26%), Gaps = 11/191 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M++        ++  SGG DSS        +  +VE L     + +  +  C     + +
Sbjct: 1   MSE--NSHIKVIVGMSGGVDSSVSAYLLQQQGYQVEGLFMKNWEEDDNDEYCA--AAEDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +             +  + I F  F  
Sbjct: 57  KDAQAVCDKLGIELHTVN--FAAEYWDNVFEYFLEEYKAGRTPNPDIMCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G                              L  E       P+  +
Sbjct: 115 FAAQALGADFIATGHYVRRELRDDKYVMCRGLDNNKDQSYFLYTLSHEHIAQTLFPVGDI 174

Query: 176 KKYETWKLAQD 186
            K E  ++A++
Sbjct: 175 AKPEVRRIAEE 185


>gi|22299799|ref|NP_683046.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermosynechococcus elongatus BP-1]
 gi|30173409|sp|Q8CWM0|MNMA_THEEB RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|22295983|dbj|BAC09808.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Thermosynechococcus elongatus BP-1]
          Length = 369

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 60/197 (30%), Gaps = 15/197 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +   P+ ++  SGG DSS  ++    +   V  L+        +      C  + +V+  
Sbjct: 1   MSDLPAVVVGLSGGVDSSVAIASLKAQGHPVVGLTL------WLMKGKGQCCSEGLVDAA 54

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +      HI+    + +    +    ++               R + F    A    
Sbjct: 55  RLCEQLGVPHHIVDSREIFEKYIVNYL--ISGYANGVTPLPCSQCNRLVKFGPMLAYSRE 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-------VTVHTPLMWLKK 177
           +LGI  I  G            R++  RA++   +     +         V  PL    K
Sbjct: 113 QLGIDYIATGHYAQVKYNPTSDRYELWRAVDRHKDQSYFLYDLPQEILAHVLFPLGQQTK 172

Query: 178 YETWKLAQDIGGQDLVN 194
            ET  LA   G      
Sbjct: 173 AETRALAAQYGLPTASK 189


>gi|289624849|ref|ZP_06457803.1| thiamine biosynthesis protein ThiI [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289650741|ref|ZP_06482084.1| thiamine biosynthesis protein ThiI [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|298489244|ref|ZP_07007261.1| Thiamine biosynthesis protein thiI [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298156208|gb|EFH97311.1| Thiamine biosynthesis protein thiI [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|330869226|gb|EGH03935.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas syringae pv. aesculi
           str. 0893_23]
          Length = 484

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 57/183 (31%), Gaps = 29/183 (15%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWKD 69
           L+L SGG DS+      + R        F+ G R      +E    + KK          
Sbjct: 183 LVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAHELGVMEVAHFIWKKYG-------- 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     +    +  S   + V  +I      +        + L  A+ +A RL I 
Sbjct: 235 ----------SSQRVLFVSVPFEEVLGEILQKVDNSHMGVVLKRMMLRAASAVADRLEID 284

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G   +  +         I A    +         V  PL+   K +   LA +IG 
Sbjct: 285 VLVTGEAISQVASQTLPNLSLIDAATDKL---------VLRPLVASHKQDIVDLATEIGT 335

Query: 190 QDL 192
            D 
Sbjct: 336 ADF 338


>gi|37520120|ref|NP_923497.1| tRNA-specific 2-thiouridylase MnmA [Gloeobacter violaceus PCC 7421]
 gi|73920124|sp|Q7MBC9|MNMA_GLOVI RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|35211112|dbj|BAC88492.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Gloeobacter violaceus PCC 7421]
          Length = 357

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 57/191 (29%), Gaps = 15/191 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +  +P  +   SGG DSS   +    +  RV  ++        +      C    + +  
Sbjct: 1   MTSSPKIVAALSGGVDSSVAAALVRKQGYRVCGVTL------WLMRGKGSCCSDGMKDAA 54

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +      HI+ +        + +   V    +           + + F +       
Sbjct: 55  RVCEQLDIPHHIVDIR--QQFEETIVDFLVEGYREGITPLPCSRCNKELKFGLLLEYARR 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWLKK 177
           +LGI  +  G            RH        T        +L  E   +   PL  + K
Sbjct: 113 KLGIGTVATGHYARTGFDGQTGRHWLARAVDRTKDQSYFLYDLSQEQLASAVFPLGEMTK 172

Query: 178 YETWKLAQDIG 188
            +T  LA ++G
Sbjct: 173 DQTRTLAAELG 183


>gi|262405518|ref|ZP_06082068.1| tRNA methyl transferase [Bacteroides sp. 2_1_22]
 gi|294646343|ref|ZP_06723990.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides ovatus SD CC 2a]
 gi|294806678|ref|ZP_06765509.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides xylanisolvens SD CC 1b]
 gi|262356393|gb|EEZ05483.1| tRNA methyl transferase [Bacteroides sp. 2_1_22]
 gi|292638298|gb|EFF56669.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides ovatus SD CC 2a]
 gi|294446098|gb|EFG14734.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides xylanisolvens SD CC 1b]
 gi|295086173|emb|CBK67696.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides xylanisolvens XB1A]
          Length = 379

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 53/187 (28%), Gaps = 10/187 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIV 61
           +I++    LL  SGG DSS      L+    V  ++F + + N      E    + +++ 
Sbjct: 1   MIEENKRVLLGMSGGTDSSVAAMRLLEAGYEVIGVTFRFYELNGSTEYLEDARNLAERLG 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                +         +    + +      T        +           + + + + AT
Sbjct: 61  IRHITYDAREIFARQIIEYFVQEYLAG-RTPVPCTLCNNYLKWPLLAKIADEMGIFYIAT 119

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
             Y   I                D         +  +N        +  P+  + K E  
Sbjct: 120 GHYAQNIQLNETFYITYAADSDKDQTFFLWGLKQDILN-------RMLLPMGDITKAEAR 172

Query: 182 KLAQDIG 188
             A + G
Sbjct: 173 AWAAEHG 179


>gi|167469773|ref|ZP_02334477.1| thiamine biosynthesis/tRNA modification protein ThiI [Yersinia
           pestis FV-1]
          Length = 470

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 168 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------SAHEI--GVKQVAHYLWNR 218

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 219 FGSSHRVRFIAI-------DFEPVVGEILEKVEDGQMGVVLKRMMVRAASQVAERYGVQA 271

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K     LA+ IG +
Sbjct: 272 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIINLARQIGTE 322

Query: 191 DL 192
           D 
Sbjct: 323 DF 324


>gi|33593833|ref|NP_881477.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bordetella pertussis Tohama I]
 gi|33600935|ref|NP_888495.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bordetella bronchiseptica RB50]
 gi|81423057|sp|Q7U359|MNMA_BORPE RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|81423064|sp|Q7U387|MNMA_BORBR RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|33563906|emb|CAE43165.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bordetella pertussis Tohama I]
 gi|33568535|emb|CAE32447.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bordetella bronchiseptica RB50]
 gi|332383252|gb|AEE68099.1| tRNA-specific 2-thiouridylase MnmA [Bordetella pertussis CS]
          Length = 371

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 48/197 (24%), Gaps = 14/197 (7%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M     +    ++  SGG DSS        +   V  L     + +     C     + +
Sbjct: 1   MPSNPTRKGRVVVGMSGGVDSSVTAWLLKQQGYEVVGLFMKNWEDDDDSEYCSTR--QDL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           ++          E   +            +      +      PN  V     I      
Sbjct: 59  LDAASVADLVGVEFEYVN---FAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFL 115

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTI---------RAIETAINLGMESHVTVHTP 171
             A  LG  +I  G      +                           L          P
Sbjct: 116 DHAMALGAEHIATGHYARVRTVETPAGPRHQLLKALDDTKDQSYFLHRLNQVQLARTLFP 175

Query: 172 LMWLKKYETWKLAQDIG 188
           L  L+K E  ++A +IG
Sbjct: 176 LGELRKTEVRRIAHEIG 192


>gi|251772733|gb|EES53295.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Leptospirillum ferrodiazotrophum]
          Length = 372

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 53/193 (27%), Gaps = 11/193 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +K+  S ++  SGG DS+            V  +      ++  E        ++    +
Sbjct: 1   MKRNKSIVIGMSGGVDSAVSAWLLKKEGYDVTGVILRLWGKDSSE--ASKGWGERTCCHV 58

Query: 65  PKWKDSLGEDHILP--LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           P  +    +   +P  +        S +  +     +    PN        + L      
Sbjct: 59  PMVEYLCQKILNIPYAIVDAESAFKSDVVDSFKSAYRTGETPNPCTSCNEKVKLPLLRRW 118

Query: 123 AYRLGITNI-------VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
           A   GI  +            + + SG                            P+  +
Sbjct: 119 AEENGIPKVATGHYTYWKRSEDFNVSGLAMAHDLAKDQSYFLSRTPDLCPENTVFPVGRM 178

Query: 176 KKYETWKLAQDIG 188
            K +  +LA++ G
Sbjct: 179 SKPQVRELAREAG 191


>gi|205814656|sp|B1X0U7|MNMA_CYAA5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 355

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 54/185 (29%), Gaps = 15/185 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS   +    +   V  L+        +      C  + +V+     +
Sbjct: 2   KKVVVGLSGGVDSSVAAASLHHQGYDVIGLTL------WLMKGKGQCCSEGMVDAAFICE 55

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 HI+    L + +  +    V+               R + F    A     L  
Sbjct: 56  QLGVPHHIVDTRELFEANIINYL--VSGYESGVTPLPCSQCNRAVKFGPMLAYAKEELNC 113

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-------TVHTPLMWLKKYETW 181
             I  G            R+  +RAI+   +     +            PL    K ET 
Sbjct: 114 DRIATGHYARIRYDEQTRRYQLLRAIDRNKDQSYFLYDLSQDILKGTIFPLGEQTKEETR 173

Query: 182 KLAQD 186
           ++A +
Sbjct: 174 RIAAE 178


>gi|172038551|ref|YP_001805052.1| tRNA-specific 2-thiouridylase MnmA [Cyanothece sp. ATCC 51142]
 gi|171700005|gb|ACB52986.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Cyanothece sp. ATCC 51142]
          Length = 367

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 54/185 (29%), Gaps = 15/185 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS   +    +   V  L+        +      C  + +V+     +
Sbjct: 14  KKVVVGLSGGVDSSVAAASLHHQGYDVIGLTL------WLMKGKGQCCSEGMVDAAFICE 67

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 HI+    L + +  +    V+               R + F    A     L  
Sbjct: 68  QLGVPHHIVDTRELFEANIINYL--VSGYESGVTPLPCSQCNRAVKFGPMLAYAKEELNC 125

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-------TVHTPLMWLKKYETW 181
             I  G            R+  +RAI+   +     +            PL    K ET 
Sbjct: 126 DRIATGHYARIRYDEQTRRYQLLRAIDRNKDQSYFLYDLSQDILKGTIFPLGEQTKEETR 185

Query: 182 KLAQD 186
           ++A +
Sbjct: 186 RIAAE 190


>gi|153875033|ref|ZP_02003007.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Beggiatoa sp. PS]
 gi|152068503|gb|EDN66993.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Beggiatoa sp. PS]
          Length = 359

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 46/184 (25%), Gaps = 10/184 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS        +   V+ L     + +  E  C     + + +       
Sbjct: 2   KVIVGMSGGVDSSVAALLLKKQGYEVQGLFMKNWEEDDTENYCS--AAEDVRDAQAVCDT 59

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                H +      +   +  T  +             +  R  I        A  LG  
Sbjct: 60  LEIPLHTVN--FATEYWDNVFTHCLQEYQAGRTPNPDILCNRE-IKFKVFLEHALHLGGK 116

Query: 130 NIVIGVCETDYSGYPDC-----RHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            I  G                              LG         P+  L+K +  +LA
Sbjct: 117 AIATGHYVRLGKNNAHYQLLKGHDPNKDQSYFLYTLGQSQLAHSLFPIGELQKTQVRQLA 176

Query: 185 QDIG 188
           +  G
Sbjct: 177 EQAG 180


>gi|114569244|ref|YP_755924.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Maricaulis maris MCS10]
 gi|122316614|sp|Q0ARV1|MNMA_MARMM RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|114339706|gb|ABI64986.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Maricaulis maris MCS10]
          Length = 405

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 53/185 (28%), Gaps = 9/185 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +        V  ++   Y     +  +   C  + I +     +
Sbjct: 37  RVVVAMSGGVDSSVTAALLHHLGYDVVGVTLQLYDHGAAMAKKGACCAGQDIYDAKRVAE 96

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++ +  A        P   V     +      T A +LG 
Sbjct: 97  ACGFRHYVLD---YESRFREAVIEEFADTYLAGFTPIPCVRCNQTVKFADLLTTARQLGA 153

Query: 129 TNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +     +  V   + +                     +    +  PL  L K +T +L
Sbjct: 154 VCMATGHYIQRVDGPNGAELRRAADAGKDQSYFLFATTHDQLDFLRFPLGHLNKDQTREL 213

Query: 184 AQDIG 188
           A+  G
Sbjct: 214 AEAFG 218


>gi|90413208|ref|ZP_01221203.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Photobacterium profundum 3TCK]
 gi|90325760|gb|EAS42218.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Photobacterium profundum 3TCK]
          Length = 371

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 55/194 (28%), Gaps = 14/194 (7%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS      L +  +VE L     + +  E  C     + +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLLQQGYQVEGLFMKNWEEDDNEEYCS--AAEDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +            H +      +   +     +A            +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIHLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETD------YSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPL 172
                L    I +G                  R       ++     L  E       P+
Sbjct: 115 FADEVLEADYIAMGHYTRRSFPTAEGEKPKMLRGVDGNKDQSYFLYTLSHEQIARSLFPV 174

Query: 173 MWLKKYETWKLAQD 186
             L+K E  ++A++
Sbjct: 175 GELEKPEVRRIAEE 188


>gi|57529561|ref|NP_001006556.1| GMP synthase [Gallus gallus]
 gi|53136506|emb|CAG32582.1| hypothetical protein RCJMB04_30a22 [Gallus gallus]
          Length = 693

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 59/202 (29%), Gaps = 21/202 (10%)

Query: 8   APSALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +   L+L SGG DS+ C +    AL+R D+V  +  D G   K E +      KK+   +
Sbjct: 236 SSKVLVLLSGGVDSTVCTALLNRALNR-DQVIAVHIDNGFMRKRESQSVEEALKKLGIQV 294

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                +    H                       +  N+  +    R II   F      
Sbjct: 295 KVVNAA----HSFYNGNTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANE 350

Query: 125 RLGITNIVIGVCETDYSGYPDC-------------RHDTIRAIETAINLGMESHVTVHTP 171
            +G  N+                                    +T +   +     V  P
Sbjct: 351 VIGEMNLKPEEVFLAQGTLRPDLIESASLVASGKAEVIKTHHNDTELIRKLREEGKVIEP 410

Query: 172 LMWLKKYETWKLAQDIGGQDLV 193
           L    K E   L +++G  + +
Sbjct: 411 LKDFHKDEVRVLGRELGLPEEL 432


>gi|148260759|ref|YP_001234886.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acidiphilium cryptum JF-5]
 gi|205811039|sp|A5FZD5|MNMA_ACICJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|146402440|gb|ABQ30967.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acidiphilium cryptum JF-5]
          Length = 345

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 37/135 (27%), Gaps = 4/135 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS       +    V  ++   Y        +   C  + I +      
Sbjct: 2   RVVVAMSGGVDSSVVAGLMHEAGHEVIGVTLQLYDHGAATGRKGACCAGQDIHDARNVAD 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 +++          +++  + A    +   P   V     +       LA  LG 
Sbjct: 62  RLGIAHYVID---AEAAFRAAVIGDFAESYAEGRTPVPCVRCNQHLKFGDLLGLARDLGA 118

Query: 129 TNIVIGVCETDYSGY 143
             +  G       G 
Sbjct: 119 EALATGHYVRREDGP 133


>gi|315920804|ref|ZP_07917044.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313694679|gb|EFS31514.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 384

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 51/186 (27%), Gaps = 10/186 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIVE 62
           +++    LL  SGG DSS      L+    V  ++F + + N      E    + +++  
Sbjct: 1   MEENKRVLLGMSGGTDSSVAAMRLLEAGYEVIGVTFRFYELNGSTEYLEDARNLAERLGI 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
               +         +    + +      T        +           + + + + AT 
Sbjct: 61  RHITYDAREIFSKQIIEYFVQEYLAG-RTPVPCTLCNNYLKWPLLAKIADEMGIFYIATG 119

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
            Y   I                D         +  +         +  P+  + K E   
Sbjct: 120 HYAQNIQLNNTFYITYAADSDKDQTFFLWGLKQDILC-------RMLLPMGDITKVEARV 172

Query: 183 LAQDIG 188
            A + G
Sbjct: 173 WAAEHG 178


>gi|229587910|ref|YP_002870029.1| thiamine biosynthesis protein ThiI [Pseudomonas fluorescens SBW25]
 gi|259518583|sp|C3K7D0|THII_PSEFS RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|229359776|emb|CAY46626.1| thiamine biosynthesis protein [Pseudomonas fluorescens SBW25]
          Length = 484

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 58/183 (31%), Gaps = 29/183 (15%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWKD 69
           L+L SGG DS+      + R        F+ G R      +E    + KK          
Sbjct: 183 LVLMSGGFDSTVAAYQIMRRGLMSHFCFFNLGGRAHELGVMEVAHFIWKKYG-------- 234

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     +    +  S   + V  +I      +        + L  A+ +A +L I 
Sbjct: 235 ----------SSQRVLFVSVPFEEVLGEILGKVDNSHMGVVLKRMMLRAASRIADQLQID 284

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G   +  S         I  +   +         V  PL+   K +   LA++IG 
Sbjct: 285 ALVTGEAISQVSSQTLPNLSLIDCVTEKL---------VLRPLIASHKQDIIDLAEEIGT 335

Query: 190 QDL 192
            D 
Sbjct: 336 ADF 338


>gi|161936317|ref|YP_129360.2| tRNA-specific 2-thiouridylase MnmA [Photobacterium profundum SS9]
          Length = 371

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 55/194 (28%), Gaps = 14/194 (7%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS      L +  +VE L     + +  E  C     + +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLLQQGYQVEGLFMKNWEEDDNEEYCS--AAEDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +            H +      +   +     +A            +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIHLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETD------YSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPL 172
                L    I +G                  R       ++     L  E       P+
Sbjct: 115 FADEVLEADYIAMGHYTRRSFPTAEGEKPKMLRGVDSNKDQSYFLYTLSHEQIARSLFPV 174

Query: 173 MWLKKYETWKLAQD 186
             L+K E  ++A++
Sbjct: 175 GELEKPEVRRIAEE 188


>gi|163749516|ref|ZP_02156764.1| thiamine biosynthesis protein ThiI [Shewanella benthica KT99]
 gi|161330925|gb|EDQ01852.1| thiamine biosynthesis protein ThiI [Shewanella benthica KT99]
          Length = 484

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 61/196 (31%), Gaps = 27/196 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVEL 63
           +      L L SGG DS       + R  R     F+ G   +++           + ++
Sbjct: 176 MATQEDVLSLISGGFDSGVSSYQFIKRGSRTHYCFFNLGGDQHEIG----------VKQV 225

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                   GE H +          S     V  +I +             + +  A  +A
Sbjct: 226 AYHLWQKYGESHKVKFI-------SVPFDPVVTEILERIDNGQMGVVLKRMMMRAATKIA 278

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            ++GI  +V G      S       + I      +         +  PL+ + K +   +
Sbjct: 279 NKMGIQALVTGEAMGQVSSQTLTNLNVIDRCTEQL---------ILRPLIAMDKQDIINI 329

Query: 184 AQDIGGQDLVNLILEE 199
           ++ IG +D    I E 
Sbjct: 330 SRVIGTEDFSKSIPEY 345


>gi|329890336|ref|ZP_08268679.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
           [Brevundimonas diminuta ATCC 11568]
 gi|328845637|gb|EGF95201.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
           [Brevundimonas diminuta ATCC 11568]
          Length = 410

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/183 (13%), Positives = 53/183 (28%), Gaps = 5/183 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +        V  ++   Y     ++ +   C  + I +      
Sbjct: 46  RVVAAMSGGVDSTVVAALLHKAGYDVVGVTLQLYDHGEALKKKGACCAGQDIHDARLAAD 105

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYR 125
                 ++L        +      +  +K Q        N  V  R+++ +      A  
Sbjct: 106 LIGIPHYVLDYENRFKDAVIDQFADSYLKGQTPVPCIRCNQTVKFRDLLDVARDLG-AEA 164

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +   + V      + S        +            +    +  PL  L+K +   +A 
Sbjct: 165 MATGHYVRRATHGNRSQMRKAVDHSRDQSYFLFATTQDQLDYLRFPLADLEKPQVRGVAA 224

Query: 186 DIG 188
            +G
Sbjct: 225 SLG 227


>gi|298480486|ref|ZP_06998683.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides sp. D22]
 gi|298273307|gb|EFI14871.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides sp. D22]
          Length = 379

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 53/187 (28%), Gaps = 10/187 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIV 61
           +I++    LL  SGG DSS      L+    V  ++F + + N      E    + +++ 
Sbjct: 1   MIEENKRVLLGMSGGTDSSVAAMRLLEAGYEVIGVTFRFYELNGSTEYLEDARNLAERLG 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                +         +    + +      T        +           + + + + AT
Sbjct: 61  IRHITYDAREIFARQIIEYFVQEYLAG-RTPVPCTLCNNYLKWPLLAKIADEMGIFYIAT 119

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
             Y   I                D         +  +N        +  P+  + K E  
Sbjct: 120 GHYAQNIQLNETFYITYAADSDKDQTFFLWGLKQDILN-------RMLLPMGDITKAEAR 172

Query: 182 KLAQDIG 188
             A + G
Sbjct: 173 AWAAEHG 179


>gi|302344576|ref|YP_003809105.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Desulfarculus baarsii DSM 2075]
 gi|301641189|gb|ADK86511.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Desulfarculus baarsii DSM 2075]
          Length = 340

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 46/179 (25%), Gaps = 14/179 (7%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +  SGG DS+            V  L+   G   +  L       + +            
Sbjct: 6   VALSGGVDSTVAALMLRRAGHEVIGLTLALGAGPRRALTEAAEAARALG----------L 55

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
              ++ +A   + +  +         +  N          I  L   A  A+        
Sbjct: 56  THQVIDVAAAFERAVIAPAARAYAAGRTPNPCAVCNAALKIPALW-RAAQAFGCQALATG 114

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHV---TVHTPLMWLKKYETWKLAQDIG 188
                    G P        A   A  L          +  PL  L K E  ++A++ G
Sbjct: 115 HYARLARLGGRPVLARAADAAKSQAYFLARLRPALLERLIFPLGGLTKDEVRRVARESG 173


>gi|323144195|ref|ZP_08078830.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Succinatimonas hippei YIT 12066]
 gi|322416036|gb|EFY06735.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Succinatimonas hippei YIT 12066]
          Length = 487

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 54/182 (29%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS      A+ R  RV  L F+ G            +   + +      D 
Sbjct: 183 VLSLISGGFDSGVSTYRAIRRGCRVNYLFFNMGG-------TAHEI--GVKQESYFIWDR 233

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
               H +          +   +++  +I +             + +   + +A ++G   
Sbjct: 234 FASSHRVKFI-------TIPFEDIVGQILERTHHGVRGVILKRMMMRVGSAVAEKIGAAA 286

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I    +++         +  PL+   K +    A  IG  
Sbjct: 287 LVTGESVGQVSSQTLINLSHIDRAASSL---------ILRPLVMEDKQDIIDEATLIGTA 337

Query: 191 DL 192
             
Sbjct: 338 GF 339


>gi|258621706|ref|ZP_05716737.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio mimicus VM573]
 gi|258626348|ref|ZP_05721195.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio mimicus VM603]
 gi|262171838|ref|ZP_06039516.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio mimicus MB-451]
 gi|258581400|gb|EEW06302.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio mimicus VM603]
 gi|258585937|gb|EEW10655.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio mimicus VM573]
 gi|261892914|gb|EEY38900.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio mimicus MB-451]
          Length = 371

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 55/190 (28%), Gaps = 11/190 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +  +VE L     + +  E  C     + + +   
Sbjct: 8   NSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYC--TAAEDLADAQA 65

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    H +      +   +     +A            +  + I F  F       
Sbjct: 66  VCDKLGIPLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEFADEV 123

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH-------TPLMWLKKY 178
           L    I +G            +   +R ++   +     +   H        P+  L+K 
Sbjct: 124 LDADYIAMGHYVRRTFPQNGEKPQMLRGLDNNKDQSYFLYTLSHEQVARSLFPVGDLEKP 183

Query: 179 ETWKLAQDIG 188
           E  ++A++ G
Sbjct: 184 EVRRIAEEQG 193


>gi|163755895|ref|ZP_02163012.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Kordia algicida OT-1]
 gi|161324066|gb|EDP95398.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Kordia algicida OT-1]
          Length = 395

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 49/187 (26%), Gaps = 12/187 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS       ++   V  L       + V +       +   + M   +
Sbjct: 2   KRVIVGLSGGVDSSVTAYLLKEQGYEVIGLFMKNWHDDSVTISNECPWLEDSNDAMIVAE 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   +    L +     +   +  + +    PN  V     I       +A  LG 
Sbjct: 62  KLGIPFQTVD---LSEQYKERIVDYMFNEYEKGRTPNPDVLCNREIKFDVFLKIALDLGA 118

Query: 129 TNIVIGVCETDYSGYPDCRHDT---------IRAIETAINLGMESHVTVHTPLMWLKKYE 179
             +  G      +   + +                     L  E       P+  L K E
Sbjct: 119 DYVATGHYCRKETIEKNGKQIHKLLAGKDGNKDQSYFLCQLSQEQLEKSLFPIGELTKPE 178

Query: 180 TWKLAQD 186
             ++A  
Sbjct: 179 VREIAAK 185


>gi|159040606|ref|YP_001539858.1| thiamine biosynthesis/tRNA modification protein ThiI [Caldivirga
           maquilingensis IC-167]
 gi|157919441|gb|ABW00868.1| thiamine biosynthesis/tRNA modification protein ThiI [Caldivirga
           maquilingensis IC-167]
          Length = 416

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 61/193 (31%), Gaps = 25/193 (12%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
            +    L L SGG DS         R   V+ L             C L     ++ L+ 
Sbjct: 177 SQGGKVLALVSGGFDSPVAYWLMSRRGALVDALF------------CSLAPPVDVIGLIR 224

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                L E+ +     L  I+  +   N    ++ +   +             A ++A  
Sbjct: 225 VI-RYLYENWVFGYDPLIMIADCTQLVNA---MRSSVNSHLMNTVFKKFLYRLAESIAVE 280

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G   IV G      S        +  A           +V +  PL+ + K +  KLA+
Sbjct: 281 GGYMGIVTGESLGQVSSQTLSNLYSASA---------GINVPIFRPLIGMDKDDIIKLAK 331

Query: 186 DIGGQDLVNLILE 198
            IG  +    ++E
Sbjct: 332 RIGTYEESVKMIE 344


>gi|294775258|ref|ZP_06740781.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Bacteroides vulgatus PC510]
 gi|294450835|gb|EFG19312.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Bacteroides vulgatus PC510]
          Length = 435

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 54/183 (29%), Gaps = 20/183 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +  L    + +  +  ++G   K E E  + V K  +     +
Sbjct: 141 KKVLLALSGGVDSSVVAALLLKAIGNNLVCVHVNHGLMRKGESEAVIEVFKNQLNANLIY 200

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D+           L  + + +  +     I    +       R +             G
Sbjct: 201 VDATDR-------FLSKLENVTDPEQKRKIIGGEFIRVFEEEARKL------------NG 241

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           +++      L  +    +  PL  L K E      ++
Sbjct: 242 IDFLGQGTIYPDIVESGTKTAKMVKSHHNVGGLPEDLQFELVEPLRQLFKDEVRACGVEL 301

Query: 188 GGQ 190
           G  
Sbjct: 302 GLP 304


>gi|157813156|gb|ABV81323.1| putative GMP synthetase [Antheraea paukstadtorum]
          Length = 199

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 2/69 (2%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKK 59
            D +      L+L SGG DS+ C +      R D+V  L  D G   K E        ++
Sbjct: 38  RDTVGDTNKVLVLVSGGVDSTVCAALLRTALREDQVIALHIDNGFMRKNESAKVERCLRE 97

Query: 60  IVELMPKWK 68
           +   +    
Sbjct: 98  LGVRLHVVN 106


>gi|260596791|ref|YP_003209362.1| tRNA s(4)U8 sulfurtransferase [Cronobacter turicensis z3032]
 gi|260215968|emb|CBA28599.1| Thiamine biosynthesis protein thiI [Cronobacter turicensis z3032]
          Length = 482

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++       
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWSR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         V  PL+   K     +A+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------VLRPLISYDKEHIIDIARKIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|156935028|ref|YP_001438944.1| thiamine biosynthesis protein ThiI [Cronobacter sakazakii ATCC
           BAA-894]
 gi|156533282|gb|ABU78108.1| hypothetical protein ESA_02879 [Cronobacter sakazakii ATCC BAA-894]
          Length = 537

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++       
Sbjct: 235 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWSR 285

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 286 FGSSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 338

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         V  PL+   K     +A+ IG +
Sbjct: 339 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------VLRPLISYDKEHIIDIARKIGTE 389

Query: 191 DL 192
           D 
Sbjct: 390 DF 391


>gi|33597091|ref|NP_884734.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bordetella parapertussis 12822]
 gi|81423061|sp|Q7U375|MNMA_BORPA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|33566542|emb|CAE37798.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bordetella parapertussis]
          Length = 371

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 48/197 (24%), Gaps = 14/197 (7%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M     +    ++  SGG DSS        +   V  L     + +     C     + +
Sbjct: 1   MPSNPTRKGRVVVGMSGGVDSSVTAWLLKQQGYEVVGLFMKNWEDDDDSEYCSTR--QDL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           ++          E   +            +      +      PN  V     I      
Sbjct: 59  LDAASVADLVGVEFEYVN---FAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFL 115

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTI---------RAIETAINLGMESHVTVHTP 171
             A  LG  +I  G      +                           L          P
Sbjct: 116 DHAMALGAEHIATGHYARVRTVETPAGPRHQLLKALDDTKDQSYFLHRLNQAQLARTLFP 175

Query: 172 LMWLKKYETWKLAQDIG 188
           L  L+K E  ++A +IG
Sbjct: 176 LGELRKTEVRRIAHEIG 192


>gi|238795558|ref|ZP_04639073.1| Thiamine biosynthesis protein thiI [Yersinia mollaretii ATCC 43969]
 gi|238720677|gb|EEQ12478.1| Thiamine biosynthesis protein thiI [Yersinia mollaretii ATCC 43969]
          Length = 483

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 181 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------SAHEI--GVKQVAHYLWNR 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 232 FGSSHRVRFVAI-------DFEPVVGEILEKVEDGQMGVVLKRMMVRAASQVAERYGVQA 284

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K     LA+ IG +
Sbjct: 285 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIINLARKIGTE 335

Query: 191 DL 192
           D 
Sbjct: 336 DF 337


>gi|238783624|ref|ZP_04627645.1| Thiamine biosynthesis protein thiI [Yersinia bercovieri ATCC 43970]
 gi|238715502|gb|EEQ07493.1| Thiamine biosynthesis protein thiI [Yersinia bercovieri ATCC 43970]
          Length = 483

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 181 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------SAHEI--GVKQVAHYLWNR 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 232 FGSSHRVRFVAI-------DFEPVVGEILEKVEDGQMGVVLKRMMVRAASQVAERYGVQA 284

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K     LA+ IG +
Sbjct: 285 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIINLARKIGTE 335

Query: 191 DL 192
           D 
Sbjct: 336 DF 337


>gi|119775197|ref|YP_927937.1| tRNA-specific 2-thiouridylase MnmA [Shewanella amazonensis SB2B]
 gi|205816912|sp|A1S7B1|MNMA_SHEAM RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|119767697|gb|ABM00268.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shewanella amazonensis SB2B]
          Length = 377

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 51/188 (27%), Gaps = 9/188 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
             +   ++  SGG DSS        +  +VE L     + +  +  C     + + +   
Sbjct: 14  NSSKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDTDEYCA--AAEDLKDAQA 71

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  + H +      +   +     +A            +  + I F  F       
Sbjct: 72  VCDKLGIKLHTVN--FAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFADDI 129

Query: 126 LGITNIVIGVCETDYSGYPDCRH-----DTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           L    I +G                              L  E       P+  L+K E 
Sbjct: 130 LDADYIAMGHYVRRRDTDGKTEMLRGIDGNKDQSYFLYTLSHEQVARSLFPVGELEKPEV 189

Query: 181 WKLAQDIG 188
            ++A++ G
Sbjct: 190 RRIAEEQG 197


>gi|226946597|ref|YP_002801670.1| thiamine biosynthesis protein ThiI [Azotobacter vinelandii DJ]
 gi|259518543|sp|C1DHW2|THII_AZOVD RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|226721524|gb|ACO80695.1| thiamine biosynthesis/tRNA modification protein ThiI [Azotobacter
           vinelandii DJ]
          Length = 484

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 54/181 (29%), Gaps = 25/181 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           L+L SGG DS+      + R        F+ G R              ++E+        
Sbjct: 183 LVLMSGGFDSTVAAFQTMRRGLMTHFCFFNLGGRAHELG---------VMEVAHYLWQKY 233

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G    +       +  S   + V  +I      +        + L  A  +A RL I  +
Sbjct: 234 GSSQRV-------LFVSVPFEEVVGEILGKVDNSQMGVILKRMMLRAATRVAERLKIDAL 286

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V G   +  S         I +    +         V  PL+   K +    A  IG  +
Sbjct: 287 VTGEAISQVSSQTLPNLSVIDSATDML---------VLRPLIASHKQDIIDTATRIGTAE 337

Query: 192 L 192
            
Sbjct: 338 F 338


>gi|310816020|ref|YP_003963984.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ketogulonicigenium vulgare Y25]
 gi|308754755|gb|ADO42684.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ketogulonicigenium vulgare Y25]
          Length = 379

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 49/186 (26%), Gaps = 10/186 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +        V  ++   Y     +  +   C  + I +     +
Sbjct: 20  RVVVAMSGGVDSSVVAAQLKREGYDVVGVTLQLYDHGAALAKKGACCAGRDIHDARRVAE 79

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +     ++L           ++    A        P   +     +        A  L  
Sbjct: 80  EMGFPHYVLDYEN---TFREAVIDEFADSYLAGATPVPCIRCNERVKFKDLLQTAKDLDA 136

Query: 129 TNI----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL--KKYETWK 182
             +     I     DY+       D  R     +       +      +     K ET  
Sbjct: 137 DCMATGHYIQRKMGDYAPELHSAADPNRDQSYFLFSTTPEQLAYLRFPLGHLKSKAETRA 196

Query: 183 LAQDIG 188
           LA + G
Sbjct: 197 LAAEFG 202


>gi|108757976|ref|YP_633262.1| argininosuccinate synthase [Myxococcus xanthus DK 1622]
 gi|108461856|gb|ABF87041.1| argininosuccinate synthase [Myxococcus xanthus DK 1622]
          Length = 396

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 29/62 (46%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          +    + +L FSGG D++ C  +  ++   V T++ D G     +LE    + K++  + 
Sbjct: 1  MSNKKNVVLAFSGGLDTAFCAVYLREQGYDVTTVTVDTGGFPPEQLERIAALSKQLGAVE 60

Query: 65 PK 66
            
Sbjct: 61 HV 62


>gi|326926259|ref|XP_003209320.1| PREDICTED: GMP synthase [glutamine-hydrolyzing]-like [Meleagris
           gallopavo]
          Length = 710

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 4/64 (6%)

Query: 8   APSALLLFSGGQDSSTCLSW---ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +   L+L SGG DS+ C +    AL+R D+V  +  D G   K E +      KK+   +
Sbjct: 253 SSKVLVLLSGGVDSTVCTALLNRALNR-DQVIAVHIDNGFMRKRESQSVEEALKKLGIQV 311

Query: 65  PKWK 68
               
Sbjct: 312 KVVN 315


>gi|326336750|ref|ZP_08202918.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Capnocytophaga sp. oral taxon 338 str. F0234]
 gi|325691220|gb|EGD33191.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Capnocytophaga sp. oral taxon 338 str. F0234]
          Length = 396

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 53/188 (28%), Gaps = 12/188 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS            V  +       + V +       +   + +   +
Sbjct: 2   KRVVVGLSGGVDSSVAAYLLQREGYEVIGIFMKNWHDDSVTISNECPWLEDSNDALMVAE 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   + ++   +     +   +  + +    PN  V     I       LA  LG 
Sbjct: 62  KLGIPFQTVDMS---EPYKQRIVDYMFREYERGRTPNPDVLCNREIKFATFLELALNLGA 118

Query: 129 TNI----VIGVCETDYSGYPDCRHDTIRAIETA-----INLGMESHVTVHTPLMWLKKYE 179
             +         E + +G    R  T +            L  +       P+  L+K E
Sbjct: 119 DYVATGHYCRKEEIEVNGQKIYRLLTGKDNNKDQSYFLCQLSQQQLEKALFPIGNLQKSE 178

Query: 180 TWKLAQDI 187
              +A+ +
Sbjct: 179 VRTIAKQL 186


>gi|237749060|ref|ZP_04579540.1| tRNA-specific 2-thiouridylase mnmA [Oxalobacter formigenes OXCC13]
 gi|229380422|gb|EEO30513.1| tRNA-specific 2-thiouridylase mnmA [Oxalobacter formigenes OXCC13]
          Length = 367

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 47/189 (24%), Gaps = 10/189 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS       ++   V  L     + +     C         + +   
Sbjct: 3   KKKVVIGMSGGVDSSVSAWLLKEQGYEVVGLFMKNWEDDDDGEYCSARQ-----DWLDAV 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +      + +          +      + +    PN  V     I        A  LG
Sbjct: 58  SVADVIGVDIEVVNFAAEYKERVFSEFLREYEAGRTPNPDVLCNAEIKFKAFLDHAVSLG 117

Query: 128 ITNIVIGVCETDYSGYPDCRHDT-----IRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G                              L  +       PL  ++K E  K
Sbjct: 118 AEQIATGHYARVRENNGLFELMKAVDDTKDQSYFLHRLNQKQLSKAIFPLGEIRKTEVRK 177

Query: 183 LAQDIGGQD 191
           +A+ +G  +
Sbjct: 178 IAEKLGLPN 186


>gi|296132308|ref|YP_003639555.1| GMP synthase, large subunit [Thermincola sp. JR]
 gi|296030886|gb|ADG81654.1| GMP synthase, large subunit [Thermincola potens JR]
          Length = 513

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 58/187 (31%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS   +       D++  +  D+G    +  +    V +   +     
Sbjct: 219 KKVLCALSGGVDSSVAAALVHKAVGDQLTCVFVDHG---LLRKDEARQVIQTFRDQFHI- 274

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                         L  +  S+   N    + D       +      F+      A +LG
Sbjct: 275 -------------NLVAVDASARFLNKLKGVTDPEQKRKII---GNEFIRVFEEEARKLG 318

Query: 128 -ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  +V G    D           I++      L  +    +  PL WL K E  ++ + 
Sbjct: 319 EIDFLVQGTLYPDVVESGTDTAAVIKSHHNVGGLPEDMKFDLVEPLRWLFKDEVRQVGEQ 378

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 379 LGLPERI 385


>gi|72053243|ref|XP_783757.1| PREDICTED: similar to GMPS protein [Strongylocentrotus purpuratus]
 gi|115924043|ref|XP_001183900.1| PREDICTED: similar to GMPS protein [Strongylocentrotus purpuratus]
          Length = 684

 Score = 56.8 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 60/197 (30%), Gaps = 11/197 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               L+L SGG DS+ C +      R D+V  L  D G   + E +       ++   + 
Sbjct: 226 NNKVLVLVSGGVDSTVCAALLRKALRADQVVALHIDNGFMRRNESQLVEESLSRLGLKLK 285

Query: 66  KWKD----SLGEDHI-LPLAILGDISHSSLTKNVAMKIQDNNLP--NTFVPGRNIIFLVF 118
                     G   + +           + T N+ +  ++      +TF+   + + +  
Sbjct: 286 VVNASQSFYNGTTSVPVDKTDPKSPKRITKTLNLTINPEEKRKIIGDTFMQIADEVCVEL 345

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLK 176
                  +     +        S       + I+       L  +      V  PL    
Sbjct: 346 NLKPEDTILAQGTLRPDLIESASALASSNAEAIKTHHNDTELVRQLRAKGRVVEPLKDFH 405

Query: 177 KYETWKLAQDIGGQDLV 193
           K E   L +D+G    V
Sbjct: 406 KDEVRALGKDLGLPLDV 422


>gi|300723601|ref|YP_003712906.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Xenorhabdus nematophila ATCC 19061]
 gi|297630123|emb|CBJ90760.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Xenorhabdus nematophila ATCC 19061]
          Length = 367

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 53/193 (27%), Gaps = 11/193 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +V  L     + +  E  C        
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYQVAGLFMKNWEEDDGEEYCSAADDL-- 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +A            +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIELHTIN--FAAEYWDNVFEHFLAEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G            +                 L  +       P+  L
Sbjct: 115 FAAEDLGADYIATGHYVRRRDADGISQLLRGLDGNKDQSYFLYTLSHQQIAKSLFPVGEL 174

Query: 176 KKYETWKLAQDIG 188
           +K E  ++A++IG
Sbjct: 175 EKPEVRRIAEEIG 187


>gi|295134761|ref|YP_003585437.1| tRNA methyl transferase [Zunongwangia profunda SM-A87]
 gi|294982776|gb|ADF53241.1| tRNA methyl transferase [Zunongwangia profunda SM-A87]
          Length = 395

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 37/137 (27%), Gaps = 3/137 (2%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS       ++   V  L       + V +       +   + M   +
Sbjct: 2   KKVVVGLSGGVDSSVSAYLLKEQGYEVIGLFMKNWHDDSVTISDECPWLEDSNDAMIVAE 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   +    L +     +   +  + +    PN  V     I       +A  LG 
Sbjct: 62  KLGIPFQTVD---LSEQYKERIVDYMFNEYERGRTPNPDVLCNREIKFDVFMKIALSLGA 118

Query: 129 TNIVIGVCETDYSGYPD 145
             +  G          +
Sbjct: 119 DYVATGHYCRKGEIEKN 135


>gi|81615317|sp|Q6LT18|MNMA_PHOPR RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|46912768|emb|CAG19558.1| putative (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Photobacterium profundum SS9]
          Length = 377

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 55/194 (28%), Gaps = 14/194 (7%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS      L +  +VE L     + +  E  C     + +
Sbjct: 7   MSD--NSQKKVIVGMSGGVDSSVSAYLLLQQGYQVEGLFMKNWEEDDNEEYCS--AAEDL 62

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +            H +      +   +     +A            +  + I F  F  
Sbjct: 63  ADAQAVCDKLGIHLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLE 120

Query: 121 TLAYRLGITNIVIGVCETD------YSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPL 172
                L    I +G                  R       ++     L  E       P+
Sbjct: 121 FADEVLEADYIAMGHYTRRSFPTAEGEKPKMLRGVDSNKDQSYFLYTLSHEQIARSLFPV 180

Query: 173 MWLKKYETWKLAQD 186
             L+K E  ++A++
Sbjct: 181 GELEKPEVRRIAEE 194


>gi|254475742|ref|ZP_05089128.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ruegeria sp. R11]
 gi|214029985|gb|EEB70820.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ruegeria sp. R11]
          Length = 381

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/184 (11%), Positives = 49/184 (26%), Gaps = 6/184 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   ++  D+   V  ++   Y     +  +   C    I +     +
Sbjct: 22  RVVVAMSGGVDSSVVAAYLADQGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDARRVAE 81

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +     ++L    +   +      +  +                   L+  A        
Sbjct: 82  ERGFPHYVLDYENIFKDAVIDEFADSYLAGATPVPCIRCNERVKFKDLLETARDLEA-DC 140

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL----KKYETWKLA 184
                 +     +  P+         + +  L   +   +      L     K  T ++A
Sbjct: 141 MATGHYIQRKMGAHGPELHSAEDANRDQSYFLFSTTPEQLDYLRFPLGHLPSKDATREMA 200

Query: 185 QDIG 188
              G
Sbjct: 201 AQYG 204


>gi|157414371|ref|YP_001481627.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter jejuni subsp. jejuni 81116]
 gi|172046984|sp|A8FJL3|MNMA_CAMJ8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|157385335|gb|ABV51650.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter jejuni subsp. jejuni 81116]
 gi|307747016|gb|ADN90286.1| tRNA-specific 2-thiouridylase mnmA [Campylobacter jejuni subsp.
           jejuni M1]
          Length = 338

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 42/176 (23%), Gaps = 10/176 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DS+       +    V          +         ++K    +      
Sbjct: 2   KILVAMSGGVDSTVTAYKLKNLGHEVIGCYMK---LHGKPNYHEENIKK----VEKVANF 54

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                HIL    L     + +        ++   PN        I L      A  LG  
Sbjct: 55  LQIPYHILD---LQKDFKNKVYMPFVDTYKEGKTPNPCALCNRFIKLGKLLEFAKSLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            +  G      +       D  +     +    +  +      +   K E  K   
Sbjct: 112 KLATGHYARLENNLIKTAVDESKDQSYFLASADKEALKYLIFPLGEMKKEDVKKFA 167


>gi|260853643|ref|YP_003227534.1| sulfurtransferase [Escherichia coli O26:H11 str. 11368]
 gi|257752292|dbj|BAI23794.1| sulfurtransferase [Escherichia coli O26:H11 str. 11368]
          Length = 482

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 57/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + +++    + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVVHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|237746906|ref|ZP_04577386.1| tRNA-specific 2-thiouridylase mnmA [Oxalobacter formigenes HOxBLS]
 gi|229378257|gb|EEO28348.1| tRNA-specific 2-thiouridylase mnmA [Oxalobacter formigenes HOxBLS]
          Length = 369

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 49/189 (25%), Gaps = 10/189 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS       ++   V  L     + +     C         + +   
Sbjct: 3   RKKVVIGMSGGVDSSVSAWLLKEQGYEVIGLFMKNWEDDDDSEFCSARQ-----DWLDAV 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +      + +          +      + +    PN  V     I        A  LG
Sbjct: 58  TVADVIGIDIEVVNFAAEYKERVFSEFLKEYEAGRTPNPDVLCNAEIKFKAFLDHAISLG 117

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G                   DT         L  +       PL  ++K E  +
Sbjct: 118 AERIATGHYARVRENNGFFELLKAVDDTKDQSYFLHRLNQQQLSKTIFPLGEIRKTEVRQ 177

Query: 183 LAQDIGGQD 191
           +A+ IG  +
Sbjct: 178 IAEKIGLPN 186


>gi|163789149|ref|ZP_02183592.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Flavobacteriales bacterium ALC-1]
 gi|159875562|gb|EDP69623.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Flavobacteriales bacterium ALC-1]
          Length = 395

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 48/189 (25%), Gaps = 12/189 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS       ++   V  L       + V +       +   + M    
Sbjct: 2   KRVIVGLSGGVDSSVAAYLLKEQGYEVIGLFMKNWHDDSVTISDECPWLEDSNDAMLVAD 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   + L++           N     +    PN  V     I       +A  LG 
Sbjct: 62  KLGIPFQTVDLSVQYKERIVDYMFNE---YEKGRTPNPDVLCNREIKFDVFMDIALELGA 118

Query: 129 TNIVIGVCETDYSGYPDCRHDTI---------RAIETAINLGMESHVTVHTPLMWLKKYE 179
             +  G      +   D +                     L          P+  L K E
Sbjct: 119 DYVATGHYCRKSTIEKDGKVIHQLLSGADNNKDQSYFLCQLSQAQLAKALFPIGELTKPE 178

Query: 180 TWKLAQDIG 188
             ++A+  G
Sbjct: 179 VREIAKAQG 187


>gi|283784944|ref|YP_003364809.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Citrobacter rodentium ICC168]
 gi|282948398|emb|CBG87986.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Citrobacter rodentium ICC168]
          Length = 368

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 52/189 (27%), Gaps = 9/189 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +     ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +             +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 LG E       P+  L K 
Sbjct: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDGNKDQSYFLYTLGHEQIAQSLFPVGELSKP 176

Query: 179 ETWKLAQDI 187
           +  K+A+D+
Sbjct: 177 QVRKIAEDL 185


>gi|331645597|ref|ZP_08346701.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli M605]
 gi|330910215|gb|EGH38725.1| thiamine biosynthesis protein thiI [Escherichia coli AA86]
 gi|331045759|gb|EGI17885.1| thiamine biosynthesis/tRNA modification protein ThiI [Escherichia
           coli M605]
          Length = 482

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA  IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLASQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|84500833|ref|ZP_00999068.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Oceanicola batsensis HTCC2597]
 gi|84390900|gb|EAQ03318.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Oceanicola batsensis HTCC2597]
          Length = 382

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/186 (11%), Positives = 47/186 (25%), Gaps = 6/186 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +   +    V  ++   Y     +  +   C    I +     +
Sbjct: 22  RVVVAMSGGVDSSVVAAMLAEEGYDVVGVTLQLYDHGAALAKKGACCAGLDIHDARRVAE 81

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +     ++L    +   +      +  +                   L+  A        
Sbjct: 82  EMGFPHYVLDYENIFRDAVIDEFADSYLAGATPVPCIRCNERVKFKDLLETARDLDA-DC 140

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL----KKYETWKLA 184
                 +     +   +       A + +  L   +   +      L     K ET  LA
Sbjct: 141 MATGHYIQRKMGAAGAELHSAADAARDQSYFLFSTTPEQLSFLRFPLGHLASKAETRALA 200

Query: 185 QDIGGQ 190
              G  
Sbjct: 201 AKYGLP 206


>gi|269120194|ref|YP_003308371.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Sebaldella termitidis ATCC 33386]
 gi|268614072|gb|ACZ08440.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Sebaldella termitidis ATCC 33386]
          Length = 359

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 48/187 (25%), Gaps = 12/187 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMP 65
                +L  SGG DSS       ++   V  +   ++ + ++  +       K ++ +  
Sbjct: 1   MKKRVVLGMSGGVDSSVAAILLKEQGYEVIGVFMKNWDETDENGVCPADEDYKDVIAVAE 60

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +            +  + +      T  +             +     I        A +
Sbjct: 61  QLDVPY-----YSVNFVKEYWDRVFTYFLDEYRAGRTPNPDVMC-NKEIKFKAFLDYAVK 114

Query: 126 LGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           +G   I  G            R      D          L  E    V  P+    K + 
Sbjct: 115 IGADYIATGHYARIERDSGKVRLLRGLDDNKDQTYFLCQLSQEQLDKVIFPIGEYNKKDI 174

Query: 181 WKLAQDI 187
             +A+  
Sbjct: 175 RAIAEKY 181


>gi|160914335|ref|ZP_02076554.1| hypothetical protein EUBDOL_00343 [Eubacterium dolichum DSM 3991]
 gi|158433808|gb|EDP12097.1| hypothetical protein EUBDOL_00343 [Eubacterium dolichum DSM 3991]
          Length = 430

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 55/184 (29%), Gaps = 20/184 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +  +     ++  +  ++G   K E E  + V K  ++    +
Sbjct: 136 KKVLLALSGGVDSSVVAAMLIKAIGKQLVCVHVNHGLMRKGESESVVEVFKNQMDANLVY 195

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D+           L  + +    +     I    +       R +             G
Sbjct: 196 VDA-------SERFLKKLENVDDPEAKRKIIGAEFIRVFEEEARKL------------EG 236

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           +++      L  +    +  PL +L K E      ++
Sbjct: 237 IDFLAQGTIYPDIVESGTKTAKVVKSHHNVGGLPEDLEFELVEPLYYLFKDEVRACGVEL 296

Query: 188 GGQD 191
           G   
Sbjct: 297 GLPH 300


>gi|27366203|ref|NP_761731.1| tRNA-specific 2-thiouridylase MnmA [Vibrio vulnificus CMCP6]
 gi|30173408|sp|Q8CWJ6|MNMA_VIBVU RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|27362403|gb|AAO11258.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio vulnificus CMCP6]
          Length = 374

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 52/195 (26%), Gaps = 13/195 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +VE L     + +     C     + +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDDSEYC--TAAEDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +            H +      +   +     +A            +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIHLHKIN--FASEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDT-------IRAIETAINLGMESHVTVHTPLM 173
                L    I +G            +                   L  E       P+ 
Sbjct: 115 FADEVLDADYIAMGHYVRRSFPENGEKPQMLRGLDGNKDQSYFLYTLSHEQVARSLFPVG 174

Query: 174 WLKKYETWKLAQDIG 188
            L+K E  ++A++ G
Sbjct: 175 DLEKPEVRRIAEEQG 189


>gi|227874682|ref|ZP_03992843.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mobiluncus mulieris ATCC 35243]
 gi|227844725|gb|EEJ54873.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mobiluncus mulieris ATCC 35243]
          Length = 394

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/196 (12%), Positives = 45/196 (22%), Gaps = 8/196 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +   ++  SGG DS+   +  L++   V        + +           + + +    
Sbjct: 1   MSKKVIIGLSGGVDSAVAAARLLEQGYDVHAFFMKLEESDCDGENNPT--AQALADARKV 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                       +  L D     +             PN  V    +    +    A R 
Sbjct: 59  AAYLGIPPEKFHVWELVDRFERGVITPFVEAYASGLTPNPCVRCNRVFKFGYVVERALRE 118

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINL------GMESHVTVHTPLMWLKKYET 180
           G   +  G            R     ++E   +              +        K ET
Sbjct: 119 GFDYVATGHYARLDHIGDGFRLRRGASLEKDQSYVLAGARAEMLAHAIFPLFDVRDKAET 178

Query: 181 WKLAQDIGGQDLVNLI 196
              AQ  G        
Sbjct: 179 RAEAQRRGLPVAHKRD 194


>gi|261346379|ref|ZP_05974023.1| thiamine biosynthesis/tRNA modification protein ThiI [Providencia
           rustigianii DSM 4541]
 gi|282565697|gb|EFB71232.1| thiamine biosynthesis/tRNA modification protein ThiI [Providencia
           rustigianii DSM 4541]
          Length = 483

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVKQIAYYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHKVRFIAVN-------FEPVVAEILEKIDDGQMGVVLKRMMVRAASRVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I      +         +  PL+   K    KLA+ IG +
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIIKLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|114332031|ref|YP_748253.1| argininosuccinate synthase [Nitrosomonas eutropha C91]
 gi|122313270|sp|Q0AEE4|ASSY_NITEC RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|114309045|gb|ABI60288.1| argininosuccinate synthase [Nitrosomonas eutropha C91]
          Length = 404

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 63/192 (32%), Gaps = 13/192 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + K   A+L FSGG D+S  L W  D +   V T + D GQ  ++E      ++  I E+
Sbjct: 1   MDKVKKAVLAFSGGLDTSVILKWLQDTYQCEVVTFTADIGQGEEIEPARAKALQFGIKEI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                ++    D++ P+         + T      +   ++    +  R +         
Sbjct: 61  FIEDLREEFVRDYVFPM-------FRANTVYEGEYLLGTSIARPLIAKRQVEIAQQTGAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A   G T         +   Y       + A     +L     +  +     +      +
Sbjct: 114 AVSHGATGKGNDQVRFELGYYALQPDIRVIAPWREWDLTSREKLLAYAEKQGIP----IE 169

Query: 183 LAQDIGGQDLVN 194
           + +  G    ++
Sbjct: 170 MKKKQGSPYSMD 181


>gi|189465036|ref|ZP_03013821.1| hypothetical protein BACINT_01380 [Bacteroides intestinalis DSM
           17393]
 gi|189437310|gb|EDV06295.1| hypothetical protein BACINT_01380 [Bacteroides intestinalis DSM
           17393]
          Length = 350

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 48/186 (25%), Gaps = 10/186 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIVE 62
           +K     LL  SGG DSS       +    V  ++F +      E   +    +  ++  
Sbjct: 1   MKSKKRVLLGMSGGTDSSVAAMLLQEAGYEVTGVTFRFYDSEGFEESLDDARTLASRLNI 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
               +         +    +G+   S+ T        +           + + + + +T 
Sbjct: 61  PHIIYDARELFRERIIRYFIGE-YLSARTPVPCTLCNNELKWPLLAKIADEMGIYWISTG 119

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
            Y   +                D         +  +         +  P+    K E   
Sbjct: 120 HYVRKVFQDNHYFIAPAADRDKDQTFFLWGLKQDILE-------RMILPMGDWTKDEVRT 172

Query: 183 LAQDIG 188
            A   G
Sbjct: 173 YAAGRG 178


>gi|160944760|ref|ZP_02091987.1| hypothetical protein FAEPRAM212_02275 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443944|gb|EDP20948.1| hypothetical protein FAEPRAM212_02275 [Faecalibacterium prausnitzii
           M21/2]
          Length = 367

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 54/189 (28%), Gaps = 10/189 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMP 65
             P AL+  SGG DSS               ++          +   + C  +K +E   
Sbjct: 8   NRPRALIAMSGGVDSSVAACLMQQAGYDCTGITMRLTHNETLGQSGYQTCCSEKDIEDAA 67

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +   +L   + +          + + +      +    PN  +     +        A  
Sbjct: 68  EVAFALDMPYQV--LDFTADFRAQIIEKFIRVYEAGGTPNPCIDCNKYMKFRHLLDWAEE 125

Query: 126 LGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            G+  +V G            R        +         NL  E    +  PL  L K 
Sbjct: 126 HGMEYVVTGHYARVEQDAATGRWLLKKGLDEGKDQSYVLYNLTQEQLAHIRLPLGALHKT 185

Query: 179 ETWKLAQDI 187
           E  ++AQ+ 
Sbjct: 186 EVREIAQEH 194


>gi|289423312|ref|ZP_06425120.1| GMP synthase [Peptostreptococcus anaerobius 653-L]
 gi|289156243|gb|EFD04900.1| GMP synthase [Peptostreptococcus anaerobius 653-L]
          Length = 511

 Score = 56.8 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 52/195 (26%), Gaps = 21/195 (10%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCV-RKKI 60
             +     AL   SGG DSS   +         +  +  D+G   K E +    + R+K 
Sbjct: 210 KAMVGDKKALCALSGGVDSSVAAALMHKAIGKNLTCVFVDHGLLRKNEGDDVERIFREKF 269

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
              + +               LG ++  +  +     I +          R         
Sbjct: 270 GMNLVRVNAED--------RFLGKLAGVTEPEAKRKIIGEEF-------IRVFEEESHKL 314

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
                L    I   V E+                             +  PL  L K E 
Sbjct: 315 GKMDFLVQGTIYPDVIESGLG----DSATIKSHHNVGGLPEDVDFQEIIEPLRELFKDEV 370

Query: 181 WKLAQDIGGQDLVNL 195
            K+  ++G ++ +  
Sbjct: 371 RKIGLELGIEENLIF 385


>gi|238752776|ref|ZP_04614245.1| Thiamine biosynthesis protein thiI [Yersinia rohdei ATCC 43380]
 gi|238709034|gb|EEQ01283.1| Thiamine biosynthesis protein thiI [Yersinia rohdei ATCC 43380]
          Length = 483

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 181 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------SAHEI--GVKQVAHYLWNR 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 232 FGSSHRVRFVAI-------DFEPVVGEILEKVEDGQMGVVLKRMMVRAASQVAERYGVQA 284

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K     LA+ IG +
Sbjct: 285 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIINLARQIGTE 335

Query: 191 DL 192
           D 
Sbjct: 336 DF 337


>gi|319940913|ref|ZP_08015251.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sutterella wadsworthensis 3_1_45B]
 gi|319805629|gb|EFW02417.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sutterella wadsworthensis 3_1_45B]
          Length = 382

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 51/194 (26%), Gaps = 14/194 (7%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
            + + K    ++  SGG DSS       ++   V  L     + +     C     +  +
Sbjct: 14  TEQMSK-GKVVVGLSGGVDSSVSAWLLKEQGYEVIGLFMKNWEDDDDSEYCSSR--QDFI 70

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +          +   +            +  N   +      PN  +   + I       
Sbjct: 71  DATSVADVVGID---IEAVNFAKEYKDRVFSNFLEEYSAGRTPNPDILCNSEIKFRAFLD 127

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDT--------IRAIETAINLGMESHVTVHTPLM 173
            A R+G   I  G                                 L  E    V  P+ 
Sbjct: 128 HAMRMGADWIATGHYARVQRPEGVDGPTELLRGIDPGKDQSYFLHRLSQEQIARVLFPVG 187

Query: 174 WLKKYETWKLAQDI 187
            + K +  ++A++I
Sbjct: 188 NMFKTDVRRIAEEI 201


>gi|270291444|ref|ZP_06197666.1| tRNA methyl transferase [Pediococcus acidilactici 7_4]
 gi|304385157|ref|ZP_07367503.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pediococcus acidilactici DSM 20284]
 gi|270280290|gb|EFA26126.1| tRNA methyl transferase [Pediococcus acidilactici 7_4]
 gi|304329351|gb|EFL96571.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pediococcus acidilactici DSM 20284]
          Length = 377

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 46/194 (23%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS        +   V  +             C     +  
Sbjct: 1   MTD--NSKTRVVVGMSGGVDSSVVAYLLKKQGYDVVGVFMKNWDDTDENGYC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            +      + +    PN  V   N I      
Sbjct: 57  KDVAKVAAKIGIPYYSVN---FEKEYWDRVFTYFLDEYKKGRTPNPDVICNNEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
             A  LG   +  G           +                   L  E    V  PL  
Sbjct: 114 DYAISLGADYVATGHYAQVERDENGHQHLLRATDSNKDQTYFLSQLSAEQLDRVMFPLGG 173

Query: 175 LKKYETWKLAQDIG 188
           + K E   +A++ G
Sbjct: 174 MVKPEVRAIAKEAG 187


>gi|163801953|ref|ZP_02195849.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio sp. AND4]
 gi|159174094|gb|EDP58902.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio sp. AND4]
          Length = 374

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 52/193 (26%), Gaps = 13/193 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +VE L     + +  E  C     + +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYC--TAAEDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +            H +      +   +     +A            +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIHLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDT-------IRAIETAINLGMESHVTVHTPLM 173
                L    I +G            +                   L  E       P+ 
Sbjct: 115 FADEVLDADYIAMGHYVRRSFPENGKKPQMLRGLDSNKDQSYFLYTLSNEQIARSLFPVG 174

Query: 174 WLKKYETWKLAQD 186
            L+K E  ++A++
Sbjct: 175 NLEKPEVRRIAEE 187


>gi|307721116|ref|YP_003892256.1| (ThiS-adenylate) sulfurtransferase [Sulfurimonas autotrophica DSM
           16294]
 gi|306979209|gb|ADN09244.1| (ThiS-adenylate) sulfurtransferase [Sulfurimonas autotrophica DSM
           16294]
          Length = 480

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 57/181 (31%), Gaps = 25/181 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           L L SGG DS+      + R  +   + F+ G            +   + ++     +  
Sbjct: 182 LSLMSGGFDSTVASYLTMKRGIKTHFIFFNLGG-------MAHEI--GVKQVALYLWNKF 232

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G  H +          S    +V  +I  +  P         + L+ +  +A  + I  +
Sbjct: 233 GSSHKVKFI-------SVPFDDVLTEIFRSTPPTYMGVTLKRLMLMASEKVANAMEIDAL 285

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V G      S         I  +   +         +  PL  + K E   +A +IG + 
Sbjct: 286 VTGESVAQVSSQTLRNLALIDQVTNKL---------ILRPLATMNKPEIISIANEIGTRH 336

Query: 192 L 192
            
Sbjct: 337 F 337


>gi|90407002|ref|ZP_01215192.1| thiamine biosynthesis protein ThiI [Psychromonas sp. CNPT3]
 gi|90311873|gb|EAS39968.1| thiamine biosynthesis protein ThiI [Psychromonas sp. CNPT3]
          Length = 484

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 59/192 (30%), Gaps = 25/192 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             S L L SGG DS       + R  RV    F+ G            +   + ++  + 
Sbjct: 179 QESVLSLISGGFDSGVSSYQFIKRGSRVHYCFFNLGG-------AAHEI--GVKQVAYRL 229

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +  G  H +    +         + V  +I +             + +     +A RL 
Sbjct: 230 WERFGSSHKVKFISI-------PFEPVVAEILEKVENGQMGVVLKRMMMRAGTLVAERLD 282

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I ++V G      S         I  +   +         +  PL+   K +    A+ I
Sbjct: 283 IESLVTGEALGQVSSQTLRNLSVIDKVTDML---------ILRPLIVTDKQDIIDCARVI 333

Query: 188 GGQDLVNLILEE 199
           G  +L   I E 
Sbjct: 334 GTAELSETIPEY 345


>gi|325661222|ref|ZP_08149849.1| tRNA-specific 2-thiouridylase mnmA [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325472729|gb|EGC75940.1| tRNA-specific 2-thiouridylase mnmA [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 357

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 45/190 (23%), Gaps = 12/190 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ---RNKVELECRLCVRKKIVEL 63
                ++  SGG DSS       ++   V  ++    Q   R   E     C    + + 
Sbjct: 1   MKKKVVVGMSGGVDSSVAAYLLKEQGYDVIGVTMQIWQDEDRAVEEENGGCCGLSAVDDA 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      +++            +      +      PN  +     +        +
Sbjct: 61  RRVAAALEIPYYVMN---FKKEFKEKVIDYFVQEYLHGRTPNPCIACNRYVKWESLLKRS 117

Query: 124 YRLGITNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
             +G   I  G                              NL  E       P+    K
Sbjct: 118 MDIGADYIATGHYARVVQLENGRYTLKCSATLAKDQTYALYNLTQEQLKRTLMPVGEYTK 177

Query: 178 YETWKLAQDI 187
            +  ++A+ I
Sbjct: 178 DQVREIAEKI 187


>gi|33862318|ref|NP_893878.1| GMP synthase [Prochlorococcus marinus str. MIT 9313]
 gi|44887937|sp|Q7V9A9|GUAA_PROMM RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|33640431|emb|CAE20220.1| Glutamine amidotransferase class-I:GMP synthase [Prochlorococcus
           marinus str. MIT 9313]
          Length = 528

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 52/191 (27%), Gaps = 19/191 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSST          D++  +  D G   K E E               
Sbjct: 224 QKRVLLALSGGVDSSTLAFLLKKAIGDQLTCMFIDQGFMRKGEPEF-------------- 269

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D   +   + +  +             +  ++          R              L
Sbjct: 270 LMDFFDQKFHINVEYINARQRFISKLKGIIDPEEKRKIIGTEFIRVFEEESNRLGPFDYL 329

Query: 127 GITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
               +   V E+  +       +     I++      L  +    +  PL  L K E  K
Sbjct: 330 AQGTLYPDVIESSGTNIDPKTGERVAVKIKSHHNVGGLPKDLQFKLVEPLRRLFKDEVRK 389

Query: 183 LAQDIGGQDLV 193
           + + +G  + +
Sbjct: 390 VGRALGLPEEI 400


>gi|27262188|gb|AAN87375.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
           [Heliobacillus mobilis]
          Length = 376

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 55/188 (29%), Gaps = 9/188 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              + ++  SGG DSS   +  L++   V  ++     ++  E     C     VE   +
Sbjct: 1   MPETVVVAMSGGVDSSVTAALLLEKGYNVIGVTLQIWPKDAPEGAEGGCCSLSAVEDARR 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +LG  H +      D     +      +      PN  +    +I        +  L
Sbjct: 61  VAFTLGIPHYVM--NFRDYFEEEVINYFGQEYLAGQTPNPCIRCNRVIKFEGLLQKSLAL 118

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-------TVHTPLMWLKKYE 179
           G   +  G            R+   +A +   +                  PL    K E
Sbjct: 119 GADKVATGHYARIEYDAERQRYRLGQAKDAKKDQSYVLFNMTQEQLSRTMFPLGGFTKPE 178

Query: 180 TWKLAQDI 187
             ++A+  
Sbjct: 179 IREMARAY 186


>gi|114319762|ref|YP_741445.1| argininosuccinate synthase [Alkalilimnicola ehrlichii MLHE-1]
 gi|119361257|sp|Q0AB32|ASSY_ALHEH RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|114226156|gb|ABI55955.1| argininosuccinate synthase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 402

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 61/212 (28%), Gaps = 24/212 (11%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  + +   V T + D GQ  ++E        +K  E 
Sbjct: 1   MSDVKKVVLAYSGGLDTSVILQWLRETYDCEVVTFTADLGQGEELEP------ARKKAEA 54

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
               +  + +     +         +        +   ++    +  R +         A
Sbjct: 55  FGIKEIYIDDLREEFVRDFVFPMFRANAIYEGEYLLGTSIARPLIAKRQVEIARETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              G T         +   Y    +  + A     +L     +  +       K+     
Sbjct: 115 VSHGATGKGNDQVRFELGYYGLEPNIKVIAPWREWDLNSREKLLAYAE-----KHGISIE 169

Query: 184 AQDIGGQDLVNL-----------ILEESHT-C 203
            +  GG                 +LE++ T C
Sbjct: 170 GKQSGGSPYSMDANLLHISYEGGVLEDTWTEC 201


>gi|90415927|ref|ZP_01223860.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [marine gamma proteobacterium HTCC2207]
 gi|90332301|gb|EAS47498.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [marine gamma proteobacterium HTCC2207]
          Length = 370

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 58/189 (30%), Gaps = 10/189 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           ++K    ++  SGG DSS      +++   VE L          + E   C  K  +   
Sbjct: 1   MRKIEKVIVGMSGGVDSSVAALLLMEQGYSVEGLFMKNW---DEDDETEYCTAKADLADA 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            +  D LG    L  A        ++ ++   + +    PN  +     I        A 
Sbjct: 58  QQVCDKLG--ITLHTANFAADYWDNVFEHFLEEYRAGRTPNPDILCNREIKFKVFLDYAQ 115

Query: 125 RLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            LG   I  G            R                 +   +      P+  L+K E
Sbjct: 116 ILGADAIATGHYTRLAEVDGQTRLLKGLDGNKDQSYFLHAVEQSAFAKSLFPVGELEKPE 175

Query: 180 TWKLAQDIG 188
             ++A++ G
Sbjct: 176 VRRIAEEHG 184


>gi|70733891|ref|YP_257531.1| thiamine biosynthesis protein ThiI [Pseudomonas fluorescens Pf-5]
 gi|68348190|gb|AAY95796.1| thiamine biosynthesis protein ThiI [Pseudomonas fluorescens Pf-5]
          Length = 505

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 58/183 (31%), Gaps = 29/183 (15%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWKD 69
           L+L SGG DS+      + R        F+ G R      +E    + KK          
Sbjct: 204 LVLMSGGFDSTVAAYQIMRRGLMGHFCFFNLGGRAHELGVMEVAHYIWKKYG-------- 255

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     +    +  S   + V  +I      +        + L  A+++A RL I 
Sbjct: 256 ----------SSQRVLFVSVPFEEVLGEILGKVDNSHMGVILKRMMLRAASSIADRLHID 305

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G   +  S         I  +   +         V  PL+   K +   LA +IG 
Sbjct: 306 ALVTGEAISQVSSQTLPNLSVIDCVTEKL---------VLRPLIASHKQDIIDLAVEIGT 356

Query: 190 QDL 192
            D 
Sbjct: 357 ADF 359


>gi|270263556|ref|ZP_06191825.1| thiamine biosynthesis protein ThiI [Serratia odorifera 4Rx13]
 gi|270042440|gb|EFA15535.1| thiamine biosynthesis protein ThiI [Serratia odorifera 4Rx13]
          Length = 482

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 54/182 (29%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K V     W   
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEIGVKQVAYY-LWNRF 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + + V        L    V   + +        A R G+  
Sbjct: 232 ASSHKVRFVAIDFEPVVGEILEKVDDGQMGVVLKRMMVRAASQV--------AERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K    K+A++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIIKVAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|187778511|ref|ZP_02994984.1| hypothetical protein CLOSPO_02106 [Clostridium sporogenes ATCC
           15579]
 gi|187772136|gb|EDU35938.1| hypothetical protein CLOSPO_02106 [Clostridium sporogenes ATCC
           15579]
          Length = 353

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 49/189 (25%), Gaps = 15/189 (7%)

Query: 7   KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL------ECRLCVRKK 59
            +   + L  SGG DSS       +R   V  +  D  +  + E       E    V +K
Sbjct: 1   MSKGTVALAMSGGVDSSVSAYILKERGYDVIGIYMDLWRDEREEYCNKSASEDARRVAEK 60

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +            +     +    D   S  T N  +          F          F 
Sbjct: 61  LNIPFHVINIE-KKFKDNVIDYFIDEYLSGRTPNPCVACNKTIKFEAFFNAAKEFGADFM 119

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           AT  Y          V         D  +      +  ++           P    KK  
Sbjct: 120 ATGHYCKIEERNERKVIVKAEDDKKDQTYMMYNLKQYQLDRT-------IMPCGEYKKDH 172

Query: 180 TWKLAQDIG 188
             ++A+ IG
Sbjct: 173 IREIAESIG 181


>gi|126656453|ref|ZP_01727714.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Cyanothece sp. CCY0110]
 gi|126622139|gb|EAZ92846.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Cyanothece sp. CCY0110]
          Length = 349

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 54/185 (29%), Gaps = 15/185 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS   +    +   V  L+        +      C  + +V+     +
Sbjct: 2   KKVVVGLSGGVDSSVAAASLQHQGYTVIGLTL------WLMKGKGQCCSEGMVDAAFICE 55

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 HI+    L + +  +    V+               R + F    A     L  
Sbjct: 56  QLGVPHHIVDTRELFEANIINYL--VSGYESGVTPLPCSQCNRAVKFGPMLAYAREELNC 113

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-------TVHTPLMWLKKYETW 181
             I  G            R+  +RAI+   +     +            PL    K ET 
Sbjct: 114 DRIATGHYARIRYDEQMDRYQLLRAIDRNKDQSYFLYDLSQDILKGTIFPLGEQTKEETR 173

Query: 182 KLAQD 186
           ++A +
Sbjct: 174 RIAAE 178


>gi|237809242|ref|YP_002893682.1| thiamine biosynthesis protein ThiI [Tolumonas auensis DSM 9187]
 gi|259518617|sp|C4LAC1|THII_TOLAT RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|237501503|gb|ACQ94096.1| thiamine biosynthesis/tRNA modification protein ThiI [Tolumonas
           auensis DSM 9187]
          Length = 485

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 55/188 (29%), Gaps = 25/188 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      L L SGG DS       + R  RV    F+ G            +  K V   
Sbjct: 176 LSTQEDVLSLISGGFDSGVASYLFIKRGSRVHYCFFNLGG-------AAHEIGVKQVAYY 228

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             W        +           S   + V  +I +             + +  A+ +A 
Sbjct: 229 -LWSKYSQSHKV--------KFVSVPFEPVVGEILEKIDNGLMGVVLKRMMMRAASRVAE 279

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           R+G+  +V G      S         I  +   +         +  PL+   K +    A
Sbjct: 280 RMGVEALVTGESVGQVSSQTVTNLSVIDRVTDTL---------ILRPLIVSDKQDIIDQA 330

Query: 185 QDIGGQDL 192
           + IG Q+ 
Sbjct: 331 RAIGTQEF 338


>gi|257076354|ref|ZP_05570715.1| thiamine biosynthesis protein ThiI [Ferroplasma acidarmanus fer1]
          Length = 473

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 51/186 (27%), Gaps = 25/186 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +K    A+ LFSGG DS       + R    + L       +  +    L   + +  L 
Sbjct: 165 LKSEGKAISLFSGGIDSPVATFMVMKRGMATDLLFCSLA--HPSDTLYMLKAARNL--LF 220

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     +IL    L               I  N            +   +A  L  
Sbjct: 221 RYSYGYNSNIYILDGTSL------------ITGILRNPEQKYANLIFKKLLYSYAEELCQ 268

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                 IV G      S          +  +   +L  + +  V  PL+   K ET   +
Sbjct: 269 ENDYDAIVTGESIGQVSS---------QIPKNLKSLSYDINTPVFRPLIGFDKEETINYS 319

Query: 185 QDIGGQ 190
           +  G  
Sbjct: 320 KRKGLY 325


>gi|86608644|ref|YP_477406.1| GMP synthase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86557186|gb|ABD02143.1| GMP synthase, glutamine-hydrolyzing [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 536

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 54/191 (28%), Gaps = 19/191 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSST          D++  +  D G   K E +  L + +        
Sbjct: 231 NKKVLLALSGGVDSSTLAFLLHKAIGDQLTCVFIDQGFMRKDEPQRLLRLFQ-------- 282

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 E   +P+  +                ++          R              L
Sbjct: 283 ------EQFHIPVHYVDGQERFLRQLQGVTDPEEKRKRIGAEFIRVFEEESQRLGPFEYL 336

Query: 127 GITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
               +   V E+  +       +     I++      L       +  PL  L K E  +
Sbjct: 337 AQGTLYPDVIESANTHVDPVTGERIAVKIKSHHNVGGLPENLRFKLVEPLRKLFKDEVRQ 396

Query: 183 LAQDIGGQDLV 193
           LA+ +G  + +
Sbjct: 397 LARSLGLPEEI 407


>gi|304321619|ref|YP_003855262.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Parvularcula bermudensis HTCC2503]
 gi|303300521|gb|ADM10120.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Parvularcula bermudensis HTCC2503]
          Length = 409

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 50/190 (26%), Gaps = 9/190 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVEL 63
           + K    ++  SGG DSS   +        V  ++   Y     +  +   C  + I + 
Sbjct: 21  LPKGARIVVAMSGGVDSSVTAALVHRAGYDVVGITLQLYDHGVAIAKKGACCAGQDIADA 80

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      ++L           S+ ++ A        P   V     +        A
Sbjct: 81  RAVADRLGIPHYVLDYED---RFGDSVMQDFADTYLAGATPIPCVRCNQRVKFRDLLHTA 137

Query: 124 YRLGITNIVIGVCETDYS-----GYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   +  G                                 E    +  PL  L K 
Sbjct: 138 RDLGAAAMATGHYIRRTDDDRGLALRRAEDAGKDQSYFLFATTREQLSFLRFPLGDLPKE 197

Query: 179 ETWKLAQDIG 188
            T ++A ++G
Sbjct: 198 TTRQIAAELG 207


>gi|160890962|ref|ZP_02071965.1| hypothetical protein BACUNI_03407 [Bacteroides uniformis ATCC 8492]
 gi|270294277|ref|ZP_06200479.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|317481491|ref|ZP_07940556.1| GMP synthase domain-containing protein [Bacteroides sp. 4_1_36]
 gi|156859183|gb|EDO52614.1| hypothetical protein BACUNI_03407 [Bacteroides uniformis ATCC 8492]
 gi|270275744|gb|EFA21604.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|316902337|gb|EFV24226.1| GMP synthase domain-containing protein [Bacteroides sp. 4_1_36]
          Length = 435

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 56/182 (30%), Gaps = 20/182 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +  L    D++  +  ++G   K E E  + +  K ++    + 
Sbjct: 142 KVLLALSGGVDSSVVAALLLKAIGDKLVCVHVNHGLMRKGESEAVVEIFGKELKANLIYV 201

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D+           L  + + +  +     I    +       R +             GI
Sbjct: 202 DATDR-------FLSKLENVADPEEKRKIIGGEFIRVFEEEARKLD------------GI 242

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G    D           +++      L  +    +  PL  L K E      ++G
Sbjct: 243 DFLGQGTIYPDIVESGTKTAKMVKSHHNVGGLPEDLQFELVEPLRQLFKDEVRACGVELG 302

Query: 189 GQ 190
             
Sbjct: 303 LP 304


>gi|118618570|ref|YP_906902.1| hypothetical protein MUL_3215 [Mycobacterium ulcerans Agy99]
 gi|118570680|gb|ABL05431.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
          Length = 420

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 59/234 (25%), Gaps = 32/234 (13%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           P A+ L SGG DS +       +      LS      +          R+    L     
Sbjct: 134 PDAVSLLSGGLDSLSGAVL---KGAPGLFLS------HTDNPTVTGAQRRTWNWLTSNGV 184

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +       L  A     + +  T+ +        L +     R  +       L   LG 
Sbjct: 185 EGECVRLSLNEASRKRENTT-RTRALLFYALAVALADARGIDRVEVSENGFTGLNLSLG- 242

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +          H     +   +       + +  P  W  K E  + A D+ 
Sbjct: 243 -------NDRGGVLSTRSTHPWTMHLMQRLLDDAGIDIELVNPYEWQTKGELVRAAADVC 295

Query: 189 GQDLVNLILEESHTC-------YLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
                 L+   + +C       Y G           C  C AC  R+       
Sbjct: 296 PAFAEGLV--TTLSCAKLDGRTYKGGNPNLN-----CGLCVACLTRRASIRAAG 342


>gi|160871950|ref|ZP_02062082.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rickettsiella grylli]
 gi|159120749|gb|EDP46087.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rickettsiella grylli]
          Length = 361

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 49/187 (26%), Gaps = 10/187 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K    ++  SGG DSS       ++  +VE L     + +  E+ C       I +    
Sbjct: 2   KKKRVMVGLSGGVDSSVAALLLKEQGYQVEGLFMKNWEEDDTEVYCS--ASTDIADAQAI 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     +          +++  +   + +    PN  +     I        A   
Sbjct: 60  CDKLAIPLRTIN---FAAEYWNAVFMHFLAEYRRGRTPNPDILCNKEIKFKAFLQYALHT 116

Query: 127 GITNIVIGVCETDYSGYPD-----CRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           G   I  G                C             LG         PL  L K E  
Sbjct: 117 GADFIATGHYAHKSFQNNMYQLLQCADKNKDQTYFLYTLGQHPLAHTLFPLARLTKSEVR 176

Query: 182 KLAQDIG 188
            +AQ  G
Sbjct: 177 AIAQSKG 183


>gi|88798892|ref|ZP_01114474.1| thiamine biosynthesis protein ThiI [Reinekea sp. MED297]
 gi|88778372|gb|EAR09565.1| thiamine biosynthesis protein ThiI [Reinekea sp. MED297]
          Length = 544

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 59/210 (28%), Gaps = 28/210 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           A S L L SGG DS+      + R  +   L F+ G            V   +      W
Sbjct: 236 ADSTLTLVSGGFDSTVAAYQMIRRGVKTHFLFFNLGG--AAHENGVKEVIYYL------W 287

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           K       +  +++  +    ++ ++V  +     L    +                   
Sbjct: 288 KKYGSSHKVQFVSVPFEGVVENILESVEDRYMGVVLKRMMMRA----------------- 330

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   +    Y         + + +     +   +   V  PL    K++   +A+ I
Sbjct: 331 ANQVSDRLKLDSYVTGEALSQVSSQTMMNQRLIDDVADRLVIRPLAVTDKHDIVTIARQI 390

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
           G    V  I E    C +  R         
Sbjct: 391 GAASFVERIPEY---CGVISRKPNAACKRH 417


>gi|114766932|ref|ZP_01445852.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pelagibaca bermudensis HTCC2601]
 gi|114540839|gb|EAU43901.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Roseovarius sp. HTCC2601]
          Length = 380

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 49/186 (26%), Gaps = 10/186 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +   +    V  ++   Y     +  +   C    I +     +
Sbjct: 21  RVVVAMSGGVDSSVVAAMLAEEGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDARRVAE 80

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L    +      ++    A        P   +     +        A  L  
Sbjct: 81  QMGFPHYVLDYENI---FRDAVIDEFAESYLGGATPVPCIRCNERVKFKDLLETAKDLDA 137

Query: 129 TNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL-KKYETWK 182
             +     +  +     +                 +   E    +  PL  L  K ET +
Sbjct: 138 DCMATGHYIQRMVGDQGAELHSAADANRDQSYFLFSTTPEQLDYLRFPLGHLKSKAETRE 197

Query: 183 LAQDIG 188
           LA   G
Sbjct: 198 LAAKYG 203


>gi|85709728|ref|ZP_01040793.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Erythrobacter sp. NAP1]
 gi|85688438|gb|EAQ28442.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Erythrobacter sp. NAP1]
          Length = 390

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 48/184 (26%), Gaps = 7/184 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIVELMPK 66
             ++  SGG DSS   + A D    V  ++   +DYG       +   C    I +    
Sbjct: 31  RIVVAMSGGVDSSVVAALAADTGAEVIGITLQLYDYG--AATGRKGACCAGDDIADARAV 88

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL--AY 124
                   ++                +  +  +          G     L   A    A 
Sbjct: 89  SDRLGIAHYVFDHESAFREDVVEQFADEYLAGRTPVPCIRCNMGPKFTDLFRMARELGAD 148

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            L   + V  V              +            E    +  PL  L K +  +LA
Sbjct: 149 CLATGHYVRRVEAEGGPHLYRANDPSRDQSYFLYATTQEQLDFIRFPLGGLPKTKVRELA 208

Query: 185 QDIG 188
           +  G
Sbjct: 209 EAAG 212


>gi|223986315|ref|ZP_03636326.1| hypothetical protein HOLDEFILI_03636 [Holdemania filiformis DSM
           12042]
 gi|223961723|gb|EEF66224.1| hypothetical protein HOLDEFILI_03636 [Holdemania filiformis DSM
           12042]
          Length = 435

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 56/184 (30%), Gaps = 20/184 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +  +     ++  +  ++G   K E E  + V +  ++    +
Sbjct: 141 KKVLLALSGGVDSSVVAALLIKAIGKQLVCVHVNHGLMRKGESESVIEVFRNQMDANLIY 200

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D+           L  +   +  +     I    +       R +             G
Sbjct: 201 VDA-------SERFLTKLEGVADPEQKRKIIGAEFIRVFEEEARKL------------EG 241

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           +++      L  + +  +  PL +L K E      ++
Sbjct: 242 IDFLAQGTIYPDIVESGTKTAKVVKSHHNVGGLPEDMNFELVEPLYYLFKDEVRACGLEL 301

Query: 188 GGQD 191
           G   
Sbjct: 302 GLPH 305


>gi|160884988|ref|ZP_02065991.1| hypothetical protein BACOVA_02984 [Bacteroides ovatus ATCC 8483]
 gi|237718004|ref|ZP_04548485.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|299147700|ref|ZP_07040763.1| GMP synthase, C- domain protein [Bacteroides sp. 3_1_23]
 gi|156109338|gb|EDO11083.1| hypothetical protein BACOVA_02984 [Bacteroides ovatus ATCC 8483]
 gi|229452645|gb|EEO58436.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|298513883|gb|EFI37769.1| GMP synthase, C- domain protein [Bacteroides sp. 3_1_23]
          Length = 435

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 52/183 (28%), Gaps = 20/183 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +  L    + +  +  ++G   K E E        +     + 
Sbjct: 141 KKVLLALSGGVDSSVVAALLLKAIGNNLVCVHVNHGLMRKGESE------DVVEVFSNQL 194

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           K +L    +     L  ++     +     I    +       R +             G
Sbjct: 195 KANLVYVDVTD-RFLNKLAGVEDPEQKRKIIGGEFIRVFEEEARKL------------NG 241

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           +++      L  +    +  PL  L K E      ++
Sbjct: 242 IDFLGQGTIYPDIVESGTKTAKMVKSHHNVGGLPEDLKFQLVEPLRQLFKDEVRACGLEL 301

Query: 188 GGQ 190
           G  
Sbjct: 302 GLP 304


>gi|206901317|ref|YP_002250407.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Dictyoglomus thermophilum H-6-12]
 gi|206740420|gb|ACI19478.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Dictyoglomus thermophilum H-6-12]
          Length = 345

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 61/208 (29%), Gaps = 14/208 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                 +  SGG DSST           V  L+ +      +     +   +KI + +  
Sbjct: 1   MPIKVAVGMSGGVDSSTTAYLLKKEGYEVIGLTMN------IAYSDSIKDAEKIAKYLNI 54

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +         I+     S  +          N    F               A  L
Sbjct: 55  PHFYVDLRKEFEEQIIKYFIDSYKSGYTPNPCTFCNRIIKFGLLLKK----AQELGAEYL 110

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYETWKLA 184
              + V  V + +   +   R   ++  ++     L  E       PL  L K E  KLA
Sbjct: 111 ATGHYVRKVWDEEKKVFLLKRAKDLKKDQSYFLAYLTQEQIEKSLFPLGDLTKNEVRKLA 170

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRY 212
           ++IG         ++   C+L  RD R 
Sbjct: 171 EEIGLFVSDKEESQDI--CFLPDRDYRK 196


>gi|124021760|ref|YP_001016067.1| GMP synthase [Prochlorococcus marinus str. MIT 9303]
 gi|226739662|sp|A2C5P2|GUAA_PROM3 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|123962046|gb|ABM76802.1| Glutamine amidotransferase class-I:GMP synthase [Prochlorococcus
           marinus str. MIT 9303]
          Length = 528

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 52/190 (27%), Gaps = 19/190 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST          D++  +  D G   K E E                
Sbjct: 225 KRVLLALSGGVDSSTLAFLLKKAIGDQLTCMFIDQGFMRKGEPEF--------------L 270

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D       + +  +          N  +  ++          R              L 
Sbjct: 271 MDFFDRKFNINVEYINARQRFISKLNGIVDPEEKRKIIGTEFIRVFEEESNRLGPFDYLA 330

Query: 128 ITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              +   V E+  +       +     I++      L  +    +  PL  L K E  K+
Sbjct: 331 QGTLYPDVIESAGTNIDPKTGERVAVKIKSHHNVGGLPKDLQFKLVEPLRRLFKDEVRKV 390

Query: 184 AQDIGGQDLV 193
            + +G  + +
Sbjct: 391 GRSLGLPEEI 400


>gi|57641486|ref|YP_183964.1| ATPase [Thermococcus kodakarensis KOD1]
 gi|57159810|dbj|BAD85740.1| predicted ATPase, PP-loop superfamily [Thermococcus kodakarensis
           KOD1]
          Length = 276

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 33/69 (47%), Gaps = 2/69 (2%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKI 60
           ++++K   A++ +SGG+DS   L  A + +    +E +  D+G   +  +E    + + +
Sbjct: 47  ELMEKVDRAIVAYSGGKDSVVALYLAKEVYKVPELEAVMVDHGLMAEEAIENARRMAEAL 106

Query: 61  VELMPKWKD 69
             L    + 
Sbjct: 107 GVLFKILRY 115


>gi|153808320|ref|ZP_01960988.1| hypothetical protein BACCAC_02613 [Bacteroides caccae ATCC 43185]
 gi|149129223|gb|EDM20439.1| hypothetical protein BACCAC_02613 [Bacteroides caccae ATCC 43185]
          Length = 435

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 53/184 (28%), Gaps = 22/184 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +  L    D +  +  ++G   K E E        +     + 
Sbjct: 141 KKVLLALSGGVDSSVVAALLLKAIGDNLVCVHVNHGLMRKGESE------DVVEVFSNQL 194

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL- 126
           K +L    +    +          +   +   +              F+      A +L 
Sbjct: 195 KANLIYLDVTDRFLDKLAGVEDPEQKRKIIGSE--------------FIRVFEEEARKLD 240

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI  +  G    D           +++      L  +    +  PL  L K E      +
Sbjct: 241 GIDFLGQGTIYPDIVESGTKTAKMVKSHHNVGGLPEDLKFQLVEPLRQLFKDEVRACGLE 300

Query: 187 IGGQ 190
           +G  
Sbjct: 301 LGLP 304


>gi|329962135|ref|ZP_08300146.1| GMP synthase domain protein [Bacteroides fluxus YIT 12057]
 gi|328530783|gb|EGF57641.1| GMP synthase domain protein [Bacteroides fluxus YIT 12057]
          Length = 435

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 56/182 (30%), Gaps = 20/182 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +  L    D++  +  ++G   K E E  + +  K ++    + 
Sbjct: 142 KVLLALSGGVDSSVVAALLLKAIGDKLVCVHVNHGLMRKGESEAVVEIFGKELKANLIYV 201

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D+           L  + + +  +     I    +       R +             GI
Sbjct: 202 DATDR-------FLSKLENVADPEQKRKIIGGEFIRVFEEEARKLD------------GI 242

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G    D           +++      L  +    +  PL  L K E      ++G
Sbjct: 243 DFLGQGTIYPDIVESGTKTAKMVKSHHNVGGLPEDLQFELVEPLRQLFKDEVRACGVELG 302

Query: 189 GQ 190
             
Sbjct: 303 LP 304


>gi|225851037|ref|YP_002731271.1| tRNA-specific 2-thiouridylase MnmA [Persephonella marina EX-H1]
 gi|254811456|sp|C0QRH5|MNMA_PERMH RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|225646565|gb|ACO04751.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Persephonella marina EX-H1]
          Length = 353

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 46/184 (25%), Gaps = 8/184 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +  SGG DSS       ++   V  ++               C  + I +       
Sbjct: 2   RVAVGMSGGVDSSVAALLLKEKGYDVIGVTLKLSSIVCSNDIQVCCSPQDIKDAKRVASY 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI- 128
              E +++    +      +    V    +        V  R +     A  +   LG  
Sbjct: 62  LGIEHYVIDWEDIFREKVINYF--VEEYKKGKTPNPCSVCNREVKTGRLAKFVNIVLGAD 119

Query: 129 -----TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
                  I I                          L  +    +  PL  L K E  K+
Sbjct: 120 KFATGHYIKIEDHPVYGKVIKRGSDIKKDQSYFMALLERDVLDLLIFPLSDLTKEEVRKI 179

Query: 184 AQDI 187
           A+D 
Sbjct: 180 AEDY 183


>gi|158337547|ref|YP_001518722.1| GMP synthase [Acaryochloris marina MBIC11017]
 gi|158307788|gb|ABW29405.1| GMP synthase [Acaryochloris marina MBIC11017]
          Length = 541

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 54/187 (28%), Gaps = 11/187 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSST          D +  +  D G   K+E E    + K   +    
Sbjct: 237 NKRVLLALSGGVDSSTLAFLLHKAIGDNLTCMFIDQGFMRKLEPE---RLIKLFRDQFHI 293

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             + +         + G         +   K +        V       L     LA   
Sbjct: 294 PVEYVMARDRFLERLNG-------ITDPEEKRKRIGHEFIQVFEEESRRLGPFDYLAQGT 346

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
              +++            +     I++      L  +    +  PL  L K E  K+ + 
Sbjct: 347 LYPDVIESADTNVDPATGERVAVKIKSHHNVGGLPKDLRFKLVEPLRKLFKDEVRKVGRS 406

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 407 LGLPEEI 413


>gi|15829029|ref|NP_326389.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycoplasma pulmonis UAB CTIP]
 gi|24638329|sp|Q98Q11|MNMA_MYCPU RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|14089973|emb|CAC13731.1| TRNA (5-METHYLAMINOMETHYL-2-THIOURIDYLATE)-METHYLTRANSFERASE
           [Mycoplasma pulmonis]
          Length = 371

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 49/186 (26%), Gaps = 11/186 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR--------NKVELECRLCVRKKIV 61
             ++  SGG DSS        +   V  L               N    +      +   
Sbjct: 3   KIVIGLSGGVDSSVAAYLLKQQGHEVIGLFMRNWDSLVNSDILGNSSLNQSLCPQEQDFQ 62

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +     K      + +    + +   S     +             +  + I F  F   
Sbjct: 63  DASRVAKQIGIPIYRVD--FIKEYWDSVFENLIEQYQNGFTPNPDILCNKYIKFDKFFNY 120

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-VHTPLMWLKKYET 180
              + G   + +G       G      D  +     +       +  V  PL  ++K E 
Sbjct: 121 AIEKFGADYVAMGHYAIAKEGNLYRGIDQSKDQSYFLTQVRSQVLEKVIFPLGNMEKSEV 180

Query: 181 WKLAQD 186
            ++AQ+
Sbjct: 181 RRIAQE 186


>gi|328950099|ref|YP_004367434.1| tRNA-specific 2-thiouridylase mnmA [Marinithermus hydrothermalis
           DSM 14884]
 gi|328450423|gb|AEB11324.1| tRNA-specific 2-thiouridylase mnmA [Marinithermus hydrothermalis
           DSM 14884]
          Length = 374

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 55/193 (28%), Gaps = 9/193 (4%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M++  ++    L   SGG DSS   +   ++   V      +   NK E     C     
Sbjct: 1   MSE--RRKGRVLAAMSGGVDSSVTAALLKEQGYEVIGAMMRFWPDNKPEDCFNTCCSPDA 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                +  D +G      L    ++    + +      +    P   V     +      
Sbjct: 59  AYEARRVADQIGIP--FYLLDYREVFEVEIIQPFLEGYRRGETPIPCVWCNTRVKFDALL 116

Query: 121 TLAYRLGITNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   +     V  V       +                   E+   +  P+  +
Sbjct: 117 KKARMLGCDYVATGHYVRRVEGPQGIEFHRGGDPRKDQTYFLWGTPREAMPHILFPVGHM 176

Query: 176 KKYETWKLAQDIG 188
           +K E  +LA+  G
Sbjct: 177 QKPEVRRLAERFG 189


>gi|148241148|ref|YP_001226305.1| GMP synthase [Synechococcus sp. RCC307]
 gi|147849458|emb|CAK26952.1| GMP synthase (glutamine-hydrolyzing) [Synechococcus sp. RCC307]
          Length = 563

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 52/191 (27%), Gaps = 19/191 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   LL  SGG DSST          D++  +  D G   K E E               
Sbjct: 259 SKRVLLALSGGVDSSTLAFLLHKAIGDQLTCMFIDQGFMRKGEPEF-------------- 304

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +   +   + +  +                ++          R              L
Sbjct: 305 LVEFFDKRFHINVEYINARERFINKLAGITDPEEKRRIIGTEFIRVFEEESKRLGPFDYL 364

Query: 127 GITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
               +   V E+  +       +     I++      L  +    +  PL  L K E  K
Sbjct: 365 AQGTLYPDVIESAGTNVDPKTGERVAVKIKSHHNVGGLPKDLQFKLVEPLRRLFKDEVRK 424

Query: 183 LAQDIGGQDLV 193
           + + +G  + +
Sbjct: 425 VGRSLGLPEEI 435


>gi|304439506|ref|ZP_07399414.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304372014|gb|EFM25612.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 355

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/187 (11%), Positives = 52/187 (27%), Gaps = 12/187 (6%)

Query: 5   IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      ++L  SGG DSS       ++   V  +      +N  E +         +++
Sbjct: 1   MTDKKRTVVLGISGGVDSSVAAYLLKEQGYNVIGVFM----KNWDENDEECTATDDYLDV 56

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +        + + +      +   +  T  +    +        +     I        A
Sbjct: 57  VKVANALDIKYYTVN--FEKEYWDTVFTYFLNEYKKGRTPNPDVMC-NQNIKFKAFLDFA 113

Query: 124 YRLGITNIVIGVCET----DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            +LG   I +G        +   Y     D  +     ++   E  +      +   K E
Sbjct: 114 LKLGADYIAMGHYARVKHENGHSYLLRGVDENKDQSYFLSRVKEEALKKTIFPIGDIKKE 173

Query: 180 TWKLAQD 186
             +   +
Sbjct: 174 RVREIAE 180


>gi|213052788|ref|ZP_03345666.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E00-7866]
          Length = 374

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 53/188 (28%), Gaps = 9/188 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K     ++  SGG DSS        +  +VE L     + +  E  C       + +   
Sbjct: 9   KAQKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADAQA 66

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  E H +      +   +     +             +  + I F  F    A  
Sbjct: 67  VCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAAED 124

Query: 126 LGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           LG   I  G            R                 LG E       P+  L+K + 
Sbjct: 125 LGADYIATGHYVRRADVNGKSRLLRGLDGNKDQSYFLYTLGHEQIAQSLFPVGELEKPQV 184

Query: 181 WKLAQDIG 188
            K+A+D+G
Sbjct: 185 RKIAEDLG 192


>gi|77360631|ref|YP_340206.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudoalteromonas haloplanktis TAC125]
 gi|123588218|sp|Q3IH16|MNMA_PSEHT RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|76875542|emb|CAI86763.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 366

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 51/191 (26%), Gaps = 11/191 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M++        ++  SGG DSS        +  +VE L     + +  +  C       +
Sbjct: 1   MSE--NSHIKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNDEYCA--AADDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +A            +  + I F  F  
Sbjct: 57  KDAQAVCDKLGIELHTVN--FAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G                              L  E       P+  +
Sbjct: 115 FAAQALGADFIATGHYVRRELRDDKYVMCRGLDDNKDQSYFLYTLSHEHIGQTLFPVGDI 174

Query: 176 KKYETWKLAQD 186
            K E  ++A++
Sbjct: 175 AKPEVRRIAEE 185


>gi|116492933|ref|YP_804668.1| tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase,
           PP-loop ATPase [Pediococcus pentosaceus ATCC 25745]
 gi|122265603|sp|Q03EZ6|MNMA_PEDPA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|116103083|gb|ABJ68226.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pediococcus pentosaceus ATCC 25745]
          Length = 377

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 47/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS        +   V  +             C     +  
Sbjct: 1   MTD--NSKTRVVVGMSGGVDSSVVAYLLKQQGYDVVGVFMKNWDDTDENGYC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            +      + +    PN  V   N I      
Sbjct: 57  KDVAKVAAKIGIPYYSVN---FEKEYWDRVFTYFLDEYKKGRTPNPDVICNNEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
             A  LG   +  G           +                   L  E    V  PL  
Sbjct: 114 DYAISLGADYVATGHYAQVERDENGHQHLLRATDSNKDQTYFLSQLSAEQLDRVMFPLGG 173

Query: 175 LKKYETWKLAQDIG 188
           + K E  K+A++ G
Sbjct: 174 MIKPEVRKVAEEAG 187


>gi|237802710|ref|YP_002887904.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia trachomatis
           B/Jali20/OT]
 gi|231273944|emb|CAX10736.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chlamydia trachomatis B/Jali20/OT]
          Length = 358

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 54/186 (29%), Gaps = 9/186 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSF-DYGQRNKVELECRLCVRKKIVELM 64
              + ++  SGG DSS        +    V  L   ++G++++          + +  + 
Sbjct: 1   MRKTVIVAMSGGVDSSVVAYLLKKQGEYNVVGLFMKNWGEQDENGECTATKDFRDVERIA 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            +            ++   +      ++ +             +  R I F +    +  
Sbjct: 61  EQLSIPYYT-----VSFYKEYKERVFSRFLREYANGYTPNPDVLCNREIKFDLLQKKVRE 115

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYETWK 182
             G        C     G    R       ++    G        V  PL  + K E  +
Sbjct: 116 LKGDFLATGHYCRGGADGTGLSRGIDPNKDQSYFLCGTPKDALSNVLFPLGGMYKTEVRR 175

Query: 183 LAQDIG 188
           +AQ+ G
Sbjct: 176 IAQEAG 181


>gi|114768812|ref|ZP_01446438.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [alpha
           proteobacterium HTCC2255]
 gi|114549729|gb|EAU52610.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [alpha
           proteobacterium HTCC2255]
          Length = 382

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 53/212 (25%), Gaps = 25/212 (11%)

Query: 1   MNDIIKKAPSAL---------------LLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQ 44
           M+ I+ +   AL               +  SGG DSS   +   +    V  ++   Y  
Sbjct: 1   MDKIMIQNTKALNSMGFAKDPKDTRVLVAMSGGVDSSVVAAMLSEEGYDVVGVTLQLYDH 60

Query: 45  RNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP 104
              +  +   C  + I +     ++     ++L           S+    A        P
Sbjct: 61  GAALAKKGACCAGRDIQDARRVAEEMGFPHYVLDYEN---KFKESVIDEFADAYLAGATP 117

Query: 105 NTFVPGRNIIFLVFAATLAYRLGI------TNIVIGVCETDYSGYPDCRHDTIRAIETAI 158
              +     +        A  L          I   V       +     D  ++     
Sbjct: 118 VPCIRCNERVKFRDLLETAKDLDADCMATGHYIQRFVENGKAELHKAADQDRDQSYFLFS 177

Query: 159 NLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
               +             K +T +LA   G  
Sbjct: 178 TKQEQLDYLRFPLGHLKSKKDTRELAHKYGLP 209


>gi|297518659|ref|ZP_06937045.1| thiamine biosynthesis protein ThiI [Escherichia coli OP50]
          Length = 482

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R   V    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCCVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|293369968|ref|ZP_06616535.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Bacteroides ovatus SD CMC 3f]
 gi|292634886|gb|EFF53408.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Bacteroides ovatus SD CMC 3f]
          Length = 435

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 52/183 (28%), Gaps = 20/183 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +  L    + +  +  ++G   K E E    V         + 
Sbjct: 141 KKVLLALSGGVDSSVVAALLLKAIGNNLVCVHVNHGLMRKGESEDVAEV------FSNQL 194

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           K +L    +     L  ++     +     I    +       R +             G
Sbjct: 195 KANLVYVDVTD-RFLNKLAGVEDPEQKRKIIGGEFIRVFEEEARKL------------NG 241

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           +++      L  +    +  PL  L K E      ++
Sbjct: 242 IDFLGQGTIYPDIVESGTKTAKMVKSHHNVGGLPEDLKFQLVEPLRQLFKDEVRACGLEL 301

Query: 188 GGQ 190
           G  
Sbjct: 302 GLP 304


>gi|283955448|ref|ZP_06372946.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter jejuni subsp. jejuni 414]
 gi|283793075|gb|EFC31846.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter jejuni subsp. jejuni 414]
          Length = 338

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/176 (13%), Positives = 43/176 (24%), Gaps = 10/176 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DS+       +    +          +         ++K    +      
Sbjct: 2   KILVAMSGGVDSTVTAYKLKNLGHEIIGCYMK---LHGKPNYHEENIKK----VEKVANF 54

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                HIL    L +   + +        ++   PN        I L      A  LG  
Sbjct: 55  LQIPYHILD---LQEDFKNKVYMPFVDTYKEGKTPNPCALCNRFIKLGKLLEFAKSLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            +  G      +       D  +     +    +  +      +   K E  K   
Sbjct: 112 KLATGHYARLENNLIKTALDESKDQSYFLASADKEALKYLIFPLGEMKKEDVKKFA 167


>gi|289208445|ref|YP_003460511.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thioalkalivibrio sp. K90mix]
 gi|288944076|gb|ADC71775.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thioalkalivibrio sp. K90mix]
          Length = 373

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 57/192 (29%), Gaps = 10/192 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      ++  SGG DS+   S  L+   RVE L        + + +   C  +   E+ 
Sbjct: 1   MSGPERVIVGLSGGVDSAVAASRLLEAGYRVEGLFMKNW---EDDDDAEYCAAEADFEMA 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            +    L  +  L  A   +     + ++   + +    PN  +     I        A 
Sbjct: 58  REVAACL--EIPLHKANFAEDYRQRVFRHFLHEYEAGRTPNPDILCNREIKFRSFLDHAR 115

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETA-----INLGMESHVTVHTPLMWLKKYE 179
           +LG   I  G                              L  E       PL  + K +
Sbjct: 116 QLGAQWIATGHYARVRHLPGHSELCMAADANKDQTYFLHTLTQEQLRPALFPLGDIPKDQ 175

Query: 180 TWKLAQDIGGQD 191
               A+++G  +
Sbjct: 176 VRARARELGLPN 187


>gi|163784843|ref|ZP_02179624.1| hypothetical protein HG1285_07966 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879890|gb|EDP73613.1| hypothetical protein HG1285_07966 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 341

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/130 (12%), Positives = 32/130 (24%), Gaps = 11/130 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK----KIVE 62
               A+ L+SGG DS+  +    ++   V  L F  G         R   ++     +  
Sbjct: 1   MKRKAVALYSGGLDSTLAIKLIQEQGIEVIALHFYTGFCITETKRRRGEKKEDGSHYMNP 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
            +           I+ ++             +                        A   
Sbjct: 61  ALKYAAKYGFSLEIIDIS-------EGYFDIIQNPKYGYGSNINPCIDCRAYMYKHAKKY 113

Query: 123 AYRLGITNIV 132
              +G   I+
Sbjct: 114 MEEIGADFII 123


>gi|152990183|ref|YP_001355905.1| tRNA-specific 2-thiouridylase MnmA [Nitratiruptor sp. SB155-2]
 gi|205816887|sp|A6Q239|MNMA_NITSB RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|151422044|dbj|BAF69548.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Nitratiruptor sp. SB155-2]
          Length = 339

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 50/182 (27%), Gaps = 11/182 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +   ++  SGG DSS   +    R   V  +   +   +  E   +  +      +   
Sbjct: 1   MSKKIVVAMSGGVDSSYTANLLQSRGYEVIGVYMKF---HPREEYHQKNIAN----IQKV 53

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            K    E H+L      +         V   +         +  R  +        A  L
Sbjct: 54  AKHLGIEYHVLDRT--KEFQERVYQPFVDSYVAGLTPNPCAMCNRV-MKFTELIEFADEL 110

Query: 127 GITNIVIGVCET-DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           G+ N+  G     D     +    +        NL  E    +  PL    K    K A 
Sbjct: 111 GVDNVATGHYAKTDGQFIYEATDKSKDQSYFLFNLKKEFLPRIIFPLGDWYKENVKKEAM 170

Query: 186 DI 187
            I
Sbjct: 171 KI 172


>gi|153814505|ref|ZP_01967173.1| hypothetical protein RUMTOR_00719 [Ruminococcus torques ATCC 27756]
 gi|317500546|ref|ZP_07958768.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331089354|ref|ZP_08338254.1| tRNA-specific 2-thiouridylase mnmA [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145847999|gb|EDK24917.1| hypothetical protein RUMTOR_00719 [Ruminococcus torques ATCC 27756]
 gi|316898056|gb|EFV20105.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330405417|gb|EGG84952.1| tRNA-specific 2-thiouridylase mnmA [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 356

 Score = 56.5 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 49/186 (26%), Gaps = 6/186 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN---KVELECRLCVRKKIVELMP 65
              ++  SGG DSS       ++   V  ++    Q      VE     C    + +   
Sbjct: 2   KKVVVGMSGGVDSSVAAYLLKEQGYDVIGVTMQIWQEEDVCTVEENGGCCGLSAVEDARR 61

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    +++        +      +  +  Q  N             L+  +     
Sbjct: 62  VAAALGIPYYVMNFREEFQKNVIDYFADSYVNGQTPNPCIACNRYVKWEALLKRSISIGA 121

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW---LKKYETWK 182
             I        E   +G    R     A +    L   +   +   LM      K E   
Sbjct: 122 DFIATGHYARVEQLSNGRYALRRSATAAKDQTYALYNLTQEQLKRTLMPVGEYTKEEVRV 181

Query: 183 LAQDIG 188
           +A+ IG
Sbjct: 182 IAEKIG 187


>gi|332159562|ref|YP_004424841.1| GMP synthase subunit B [Pyrococcus sp. NA2]
 gi|331035025|gb|AEC52837.1| GMP synthase subunit B [Pyrococcus sp. NA2]
          Length = 308

 Score = 56.5 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 60/187 (32%), Gaps = 25/187 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              A++  SGG DSST    A     DR+  +  + G   K E E    V K   +    
Sbjct: 20  NSKAIIALSGGVDSSTAAVLAYKAIGDRLHAVFVNTGFLRKGEPEF---VVKTFRDEFGM 76

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +        + L  ++     + +                   +F+     +A  +
Sbjct: 77  NLHYVDAQDRF-FSALKGVTDPEEKRKIIG----------------RVFIEVFEEVAREI 119

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   ++        +         I++      L    ++ +  PL  L K E  +LA+ 
Sbjct: 120 GAEYLIQ----GTIAPDWIESQGKIKSHHNVGGLPERLNLKLIEPLRDLYKDEVRELAKF 175

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 176 LGLPEKI 182


>gi|241767515|ref|ZP_04765194.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acidovorax delafieldii 2AN]
 gi|241361655|gb|EER58004.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acidovorax delafieldii 2AN]
          Length = 310

 Score = 56.5 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 46/191 (24%), Gaps = 12/191 (6%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DS+        +   V  +     + +     C   +     + +   
Sbjct: 6   KQRVVVGLSGGVDSAVTAYLLKQQGHEVVGIFMKNWEDDDDSEYCSSNI-----DFVDAA 60

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +      +            +      + Q    PN  V     I        A RLG
Sbjct: 61  AVADVIGIEIEHVNFAAEYKDRVFAEFLREYQAGRTPNPDVLCNAEIKFKAFLDHAMRLG 120

Query: 128 ITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
              I  G                      +         L          P+  L K E 
Sbjct: 121 AEKIATGHYARVRQNAATGLFELLKGLDPSKDQSYFLHRLNQAQLSKTLFPVGELHKAEV 180

Query: 181 WKLAQDIGGQD 191
            ++A +IG  +
Sbjct: 181 RRIAAEIGLPN 191


>gi|227486179|ref|ZP_03916495.1| argininosuccinate synthase [Anaerococcus lactolyticus ATCC 51172]
 gi|227235810|gb|EEI85825.1| argininosuccinate synthase [Anaerococcus lactolyticus ATCC 51172]
          Length = 413

 Score = 56.5 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 69/203 (33%), Gaps = 11/203 (5%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
            +++K+A   +L +SGG D+S  ++W ++     V  +S D GQ    + +      K I
Sbjct: 6   YEVLKEAKKVVLAYSGGLDTSVMVTWLMENGAKEVICVSVDLGQ--VKDPKAMEE--KAI 61

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                K+ +   ED  +       +   +  +NV   +    +    +    +       
Sbjct: 62  KSGAKKFYNINVEDEFVEEYDFKSLMAGAKYENV--YLLGTAIARPLISKVLVDVANKEG 119

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESHVTVHTPLMWLK 176
                 G T         + S         + A     ++      E++   H   +   
Sbjct: 120 ADLIVHGCTGKGNDQIRFELSIMAIAPDMKVIAPWRFWDIKGRSEEEAYAKDHGINLNFT 179

Query: 177 KYETWKLAQDIGGQDLVNLILEE 199
           K E + + ++I       L LE+
Sbjct: 180 KDEDYSMDENIWHLSHEGLDLED 202


>gi|21672533|ref|NP_660600.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Buchnera aphidicola str. Sg (Schizaphis graminum)]
 gi|25009493|sp|Q8K9Q8|MNMA_BUCAP RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|21623156|gb|AAM67811.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Buchnera aphidicola str. Sg (Schizaphis graminum)]
          Length = 367

 Score = 56.5 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 52/188 (27%), Gaps = 5/188 (2%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +IKK    ++  SGG DSS    +  +   +VE L        + + +      K + + 
Sbjct: 1   MIKKNKKVIIAMSGGVDSSVSAWFLKNENYQVEGLFMK--NWEEDDEKEYCNAAKDLSDA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
               K      H +  +            N   K +  N                 A   
Sbjct: 59  EEVCKKLNIHLHKVNFSKEYWEKVFENFLNEHKKGKTPNPDILCNKEIKFKIFFNYAIQE 118

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKKYET 180
            +               +G            + +  L     +    +  P+  LKK + 
Sbjct: 119 LQSDYIATGHYAQIKKKNGKYFLLKAVDLNKDQSYFLYTLKGIQLKNILFPIGGLKKSQV 178

Query: 181 WKLAQDIG 188
             +A+ IG
Sbjct: 179 RIIAKKIG 186


>gi|78221430|ref|YP_383177.1| argininosuccinate synthase [Geobacter metallireducens GS-15]
 gi|119361277|sp|Q39Z72|ASSY_GEOMG RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|78192685|gb|ABB30452.1| argininosuccinate synthase [Geobacter metallireducens GS-15]
          Length = 406

 Score = 56.5 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 59/206 (28%), Gaps = 11/206 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
           M  + K     +L +SGG D+S  L W  +     V   S D GQ +++           
Sbjct: 1   MAKVHKDVKKIVLAYSGGLDTSIILKWLKNEYGCEVIAFSADLGQGDELAPIRDKAFA-- 58

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                  + D L E+ +            +        +   ++    +  R +      
Sbjct: 59  -TGADKVYIDDLKEEFVRDFVF---PMFRANAIYEGHYLLGTSIARPLIAKRQMEIAKIE 114

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP----LMWL 175
              A   G T         + + Y      T+        L     +  +       + +
Sbjct: 115 GADAVSHGATGKGNDQVRFELAYYHFDPAITVVVPWREWKLNSRQALVNYAKKNGIPIPV 174

Query: 176 KKYETWKLAQDIGGQDLVNLILEESH 201
            K   W   +++        ILE++ 
Sbjct: 175 TKKRPWSSDRNMLHISFEGGILEDTW 200


>gi|86133287|ref|ZP_01051869.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Polaribacter sp. MED152]
 gi|85820150|gb|EAQ41297.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Polaribacter sp. MED152]
          Length = 395

 Score = 56.5 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 52/187 (27%), Gaps = 12/187 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS       ++   V  L       + V +       +   + M   +
Sbjct: 2   KRVVVGLSGGVDSSVTAHLLKEQGYEVIGLFMKNWHDDSVTISNECPWLEDSNDAMIVAE 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                  ++    L +     +   +  + +    PN  V     I       +A +LG 
Sbjct: 62  KLGIPFQVVD---LSEQYKERIVDYMFAEYEKGRTPNPDVLCNREIKFDVFMDIALKLGA 118

Query: 129 TNIVIGVCETDYSGYPDCRHDT---------IRAIETAINLGMESHVTVHTPLMWLKKYE 179
             +  G          D +                     L  +       P+  L K E
Sbjct: 119 DYVATGHYCRKAEEIIDDKPVYKLLAGKDNNKDQSYFLCQLSQQQLAKALFPIGELTKPE 178

Query: 180 TWKLAQD 186
             ++A++
Sbjct: 179 VREIAKE 185


>gi|320156716|ref|YP_004189095.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio vulnificus MO6-24/O]
 gi|319932028|gb|ADV86892.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio vulnificus MO6-24/O]
          Length = 374

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 52/195 (26%), Gaps = 13/195 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +VE L     + +     C     + +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNSEYC--TAAEDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +            H +      +   +     +A            +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIHLHKIN--FASEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDT-------IRAIETAINLGMESHVTVHTPLM 173
                L    I +G            +                   L  E       P+ 
Sbjct: 115 FADEVLDADYIAMGHYVRRSFPENGEKPQMLRGLDGNKDQSYFLYTLSHEQVARSLFPVG 174

Query: 174 WLKKYETWKLAQDIG 188
            L+K E  ++A++ G
Sbjct: 175 ELEKPEVRRIAEEQG 189


>gi|219870478|ref|YP_002474853.1| thiamine biosynthesis protein ThiI [Haemophilus parasuis SH0165]
 gi|219690682|gb|ACL31905.1| thiamine biosynthesis protein ThiI/thiamine biosynthesis ATP
           pyrophosphatase [Haemophilus parasuis SH0165]
          Length = 483

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 53/182 (29%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W   
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWSRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + + V        L    V   + I        A R  I  
Sbjct: 232 SSSHKVRFVAINFENVVGEILEKVDNGQMGVVLKRMMVRAASKI--------AERFDIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I      +         V  PL+   K +   +A++IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDKTSDTL---------VLRPLITHDKEQIIAMAKEIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|330838778|ref|YP_004413358.1| tRNA-specific 2-thiouridylase mnmA [Selenomonas sputigena ATCC
           35185]
 gi|329746542|gb|AEB99898.1| tRNA-specific 2-thiouridylase mnmA [Selenomonas sputigena ATCC
           35185]
          Length = 352

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 53/187 (28%), Gaps = 13/187 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                 +  SGG DSS C +   ++   V  ++      ++                  +
Sbjct: 1   MKKKVAVAMSGGVDSSLCAALLQEQGYEVLGITMQLSDDSREMNGVSSAATD-----ARR 55

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D LG +H++  A    +    +      +      PN  V     +      + A   
Sbjct: 56  VADFLGIEHVV--ADFRTLFSDKVVDYFLTEYLTARTPNPCVICNRFLKFGELLSFAKEK 113

Query: 127 GI------TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           G         + +   E         R +          L  E    +  PL   +K ET
Sbjct: 114 GADFLATGHYVRVEKEEDGSFSLKKGRDEKKDQSYVLYRLPREILSHILFPLGSYRKEET 173

Query: 181 WKLAQDI 187
             LAQ +
Sbjct: 174 RALAQKL 180


>gi|325111009|ref|YP_004272077.1| argininosuccinate synthase [Planctomyces brasiliensis DSM 5305]
 gi|324971277|gb|ADY62055.1| argininosuccinate synthase [Planctomyces brasiliensis DSM 5305]
          Length = 406

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 43/150 (28%), Gaps = 5/150 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               +L +SGG D+S  + W LD+   V  L  D GQ ++ + E  L    KI       
Sbjct: 3   KEKVILAYSGGLDTSVLVGWLLDKGYEVHCLYVDLGQPSE-DREAMLDKALKIGATTAVI 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D   E                  K   + +   ++    +    +        +A+  G
Sbjct: 62  ADVQEELC----TDFAFPVLQWQAKYEGIYLLGTSIARPLISKACLQRAREVGAVAFVHG 117

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETA 157
            T      C    +           A    
Sbjct: 118 ATGKGNDQCRFQLAAEALDPTVNTMAPWRM 147


>gi|159030575|emb|CAO88238.1| guaA [Microcystis aeruginosa PCC 7806]
          Length = 541

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 53/186 (28%), Gaps = 11/186 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST          D++  +  D G   K E E    + +   E     
Sbjct: 238 KRVLLALSGGVDSSTLAFLLHRAIGDQLTCMFIDQGFMRKGEPE---RLMQIFNEQFHIG 294

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +             ++  +   +   K +        V       L     LA    
Sbjct: 295 VQYVNARKRF-------LAQVAGVTDPEEKRRRIGHEFIQVFEEESNRLGPFDYLAQGTL 347

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +++            +     I++      L       +  PL  L K E  KL + I
Sbjct: 348 YPDVIESADSNVDPKTGERVAVKIKSHHNVGGLPKNLRFKLVEPLRKLFKDEVRKLGRSI 407

Query: 188 GGQDLV 193
           G  + +
Sbjct: 408 GLPEEI 413


>gi|322513968|ref|ZP_08067043.1| thiamine biosynthesis protein ThiI [Actinobacillus ureae ATCC
           25976]
 gi|322120194|gb|EFX92152.1| thiamine biosynthesis protein ThiI [Actinobacillus ureae ATCC
           25976]
          Length = 482

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 53/182 (29%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W   
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWSRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + + V        L    V   + I        A R  I  
Sbjct: 232 STSHKVRFVAINFENVVGEILEKVDNGQMGVVLKRMMVRAASKI--------AERFDIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I      +         V  PL+   K +   +A++IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDKASDTL---------VLRPLITHDKEQIIAMAKEIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|307259409|ref|ZP_07541134.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306866345|gb|EFM98208.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
          Length = 482

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 53/182 (29%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W   
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWSRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + + V        L    V   + I        A R  I  
Sbjct: 232 STSHKVRFVAINFENVVGEILEKVDNGQMGVVLKRMMVRAASKI--------AERFDIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I      +         V  PL+   K +   +A++IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDKASDTL---------VLRPLITHDKEQIIAMAKEIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|307257127|ref|ZP_07538899.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|306864289|gb|EFM96200.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
          Length = 482

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 53/182 (29%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W   
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWSRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + + V        L    V   + I        A R  I  
Sbjct: 232 STSHKVRFVAINFENVVGEILEKVDNGQMGVVLKRMMVRAASKI--------AERFDIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I      +         V  PL+   K +   +A++IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDKASDTL---------VLRPLITHDKEQIIAMAKEIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|307250326|ref|ZP_07532276.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306857653|gb|EFM89759.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
          Length = 482

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 53/182 (29%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W   
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWSRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + + V        L    V   + I        A R  I  
Sbjct: 232 STSHKVRFVAINFENVVGEILEKVDNGQMGVVLKRMMVRAASKI--------AERFDIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I      +         V  PL+   K +   +A++IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDKASDTL---------VLRPLITHDKEQIIAMAKEIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|307245992|ref|ZP_07528074.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307254971|ref|ZP_07536790.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306852927|gb|EFM85150.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306862089|gb|EFM94064.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
          Length = 482

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 53/182 (29%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W   
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWSRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + + V        L    V   + I        A R  I  
Sbjct: 232 STSHKVRFVAINFENVVGEILEKVDNGQMGVVLKRMMVRAASKI--------AERFDIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I      +         V  PL+   K +   +A++IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDKASDTL---------VLRPLITHDKEQIIAMAKEIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|303250178|ref|ZP_07336380.1| thiamine biosynthesis protein ThiI [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307252710|ref|ZP_07534601.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|302651241|gb|EFL81395.1| thiamine biosynthesis protein ThiI [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306859742|gb|EFM91764.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 482

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 53/182 (29%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W   
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWSRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + + V        L    V   + I        A R  I  
Sbjct: 232 STSHKVRFVAINFENVVGEILEKVDNGQMGVVLKRMMVRAASKI--------AERFDIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I      +         V  PL+   K +   +A++IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDKASDTL---------VLRPLITHDKEQIIAMAKEIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|190150401|ref|YP_001968926.1| thiamine biosynthesis protein ThiI [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|303253350|ref|ZP_07339499.1| thiamine biosynthesis protein ThiI [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307249157|ref|ZP_07531162.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307261555|ref|ZP_07543223.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|307263744|ref|ZP_07545350.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|189915532|gb|ACE61784.1| thiamine biosynthesis protein ThiI [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|302648032|gb|EFL78239.1| thiamine biosynthesis protein ThiI [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|306854327|gb|EFM86525.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306868678|gb|EFN00487.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306870865|gb|EFN02603.1| Thiamine biosynthesis protein thiI [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 482

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 53/182 (29%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W   
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWSRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + + V        L    V   + I        A R  I  
Sbjct: 232 STSHKVRFVAINFENVVGEILEKVDNGQMGVVLKRMMVRAASKI--------AERFDIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I      +         V  PL+   K +   +A++IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDKASDTL---------VLRPLITHDKEQIIAMAKEIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|165976497|ref|YP_001652090.1| thiamine biosynthesis protein ThiI [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|165876598|gb|ABY69646.1| thiamine biosynthesis protein [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
          Length = 465

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 53/182 (29%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W   
Sbjct: 163 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWSRY 214

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + + V        L    V   + I        A R  I  
Sbjct: 215 STSHKVRFVAINFENVVGEILEKVDNGQMGVVLKRMMVRAASKI--------AERFDIQA 266

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I      +         V  PL+   K +   +A++IG  
Sbjct: 267 IVTGEALGQVSSQTLTNLRLIDKASDTL---------VLRPLITHDKEQIIAMAKEIGTD 317

Query: 191 DL 192
           D+
Sbjct: 318 DI 319


>gi|154493619|ref|ZP_02032939.1| hypothetical protein PARMER_02959 [Parabacteroides merdae ATCC
           43184]
 gi|154086829|gb|EDN85874.1| hypothetical protein PARMER_02959 [Parabacteroides merdae ATCC
           43184]
          Length = 435

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 54/182 (29%), Gaps = 20/182 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +  L    D++  +  ++G   K E E  + V K   +L     
Sbjct: 142 KVLLALSGGVDSSVVAALLLKAIGDKLVCVHVNHGLMRKGESENVVEVFK--NQLNANLI 199

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                D  L       ++  +  +     I    +       R +             GI
Sbjct: 200 YKDVTDRFLD-----KLAGVADPEEKRKIIGGEFIRVFEEEARKLD------------GI 242

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G    D           +++      L  +    +  PL  L K E      ++G
Sbjct: 243 DFLAQGTIYPDIVESGTKTAKMVKSHHNVGGLPEDLKFELVEPLRQLFKDEVRACGLELG 302

Query: 189 GQ 190
             
Sbjct: 303 LP 304


>gi|126208546|ref|YP_001053771.1| thiamine biosynthesis protein ThiI [Actinobacillus pleuropneumoniae
           L20]
 gi|126097338|gb|ABN74166.1| thiamine biosynthesis protein ThiI [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 482

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 53/182 (29%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W   
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWSRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + + V        L    V   + I        A R  I  
Sbjct: 232 STSHKVRFVAINFENVVGEILEKVDNGQMGVVLKRMMVRAASKI--------AERFDIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I      +         V  PL+   K +   +A++IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDKASDTL---------VLRPLITHDKEQIIAMAKEIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|46143459|ref|ZP_00135196.2| COG0301: Thiamine biosynthesis ATP pyrophosphatase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
          Length = 471

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 53/182 (29%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W   
Sbjct: 169 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWSRY 220

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + + V        L    V   + I        A R  I  
Sbjct: 221 STSHKVRFVAINFENVVGEILEKVDNGQMGVVLKRMMVRAASKI--------AERFDIQA 272

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I      +         V  PL+   K +   +A++IG  
Sbjct: 273 IVTGEALGQVSSQTLTNLRLIDKASDTL---------VLRPLITHDKEQIIAMAKEIGTD 323

Query: 191 DL 192
           D+
Sbjct: 324 DI 325


>gi|239947878|ref|ZP_04699631.1| tRNA-methyltransferase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239922154|gb|EER22178.1| tRNA-methyltransferase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 370

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 55/194 (28%), Gaps = 9/194 (4%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKK 59
           M ++  K  + ++  SGG DSS   +   ++   V  ++   Y     V  +   C  + 
Sbjct: 6   MINLGDKQSTIVVAMSGGVDSSAVAAMLHEQGHNVIGITLQLYDHGMAVGKKNACCAGQD 65

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           I +            ++L           S+  N          P   V     +     
Sbjct: 66  IYDAKMVANKLGIPHYVL---GYESKFKESVIDNFVDSYLQGETPLPCVQCNKSVKFRDL 122

Query: 120 ATLAYRLGITNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
              A  LG   +     V  +   + +                     E    +  PL  
Sbjct: 123 IKTARELGADKLATGHYVRKINGDNGAELHTGLDPAKDQSYFLFTTTKEQLEYLSFPLGG 182

Query: 175 LKKYETWKLAQDIG 188
           L K ET KLA   G
Sbjct: 183 LTKDETRKLASKFG 196


>gi|91205346|ref|YP_537701.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rickettsia bellii RML369-C]
 gi|157826947|ref|YP_001496011.1| tRNA-specific 2-thiouridylase MnmA [Rickettsia bellii OSU 85-389]
 gi|122425762|sp|Q1RJ52|MNMA_RICBR RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|166235077|sp|A8GVU7|MNMA_RICB8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|91068890|gb|ABE04612.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rickettsia bellii RML369-C]
 gi|157802251|gb|ABV78974.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rickettsia bellii OSU 85-389]
          Length = 367

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 52/194 (26%), Gaps = 9/194 (4%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKK 59
           M +   +  + ++  SGG DSS       ++   V  ++   Y        +   C  + 
Sbjct: 1   MINSNDRQSTLVVAMSGGVDSSVVAGILCEQGYNVIGITLQLYDHGMATAKKNACCAGQD 60

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           I +            ++L           S+  N          P   V     +     
Sbjct: 61  IYDAKMVANKLGMPHYVLD---YESKFKESVIDNFVDSYLRGETPLPCVQCNKSVKFRDL 117

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDT-----IRAIETAINLGMESHVTVHTPLMW 174
              A  LG   +V G      +G                         E    +  PL  
Sbjct: 118 IKTAKELGADKLVTGHYVRKINGDNGPELHMGLDPLKDQSYFLFATTKEQLEYLDFPLGA 177

Query: 175 LKKYETWKLAQDIG 188
           L K ET KLA   G
Sbjct: 178 LTKDETRKLASKFG 191


>gi|13472503|ref|NP_104070.1| tRNA-specific 2-thiouridylase MnmA [Mesorhizobium loti MAFF303099]
 gi|14023249|dbj|BAB49856.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Mesorhizobium loti MAFF303099]
          Length = 378

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 44/180 (24%), Gaps = 9/180 (5%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
            SGG DSS            V  ++   Y            C  + I +     +     
Sbjct: 1   MSGGVDSSVVAGLLKREGYDVVGVTLQLYDHGAATHRAGSCCAGQDIDDARRVSETLGIP 60

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
            ++L      +    ++    A        P   V     +        A  LG   +  
Sbjct: 61  HYVLD---YEERFRKAVIDPFAESYVAGETPIPCVSCNQTVKFADLLATAKELGADALAT 117

Query: 134 GVCETDYSGYPD---CRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYETWKLAQDIG 188
           G      +        R       ++            +       L K +   +A+++G
Sbjct: 118 GHYIRSGANGAHRALYRPVDADRDQSYFLFATTQAQIDYLRFPLGGLSKPQVRAIAEEMG 177


>gi|313681611|ref|YP_004059349.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sulfuricurvum kujiense DSM 16994]
 gi|313154471|gb|ADR33149.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sulfuricurvum kujiense DSM 16994]
          Length = 339

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 46/189 (24%), Gaps = 17/189 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR---NKVELECRLCVRKKIVEL 63
                L+  SGG DS+       ++   VE +      +   +++               
Sbjct: 1   MGKKVLIGMSGGVDSTVSTLLLKEQGYDVEGVYMKLHSKPGYHEIHQARAQRAADFAGVK 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +                 L +  ++ +        ++   PN        I        A
Sbjct: 61  LHIL-------------DLQEEFNAKVFTPFIETYKEGKTPNPCALCNRNIKFGAMVAYA 107

Query: 124 YRLGITNIVIGVC-ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
             +G   +  G     D         DT         +       +  PL    K +   
Sbjct: 108 DSIGADYVATGHYIRHDGQYLLQAHDDTKDQSYFLFYIDPALVPRLLFPLGERHKSDIKA 167

Query: 183 LAQDIGGQD 191
            A  I G +
Sbjct: 168 YAAGIEGLE 176


>gi|296446642|ref|ZP_06888583.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylosinus trichosporium OB3b]
 gi|296255870|gb|EFH02956.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylosinus trichosporium OB3b]
          Length = 411

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 50/183 (27%), Gaps = 9/183 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +   ++   V  ++   Y     V  +   C  + I +      
Sbjct: 27  RVVVAMSGGVDSSVVAALLAEQGYDVVGVTLQLYDHGEAVHRKGSCCAGQDIHDARRVAA 86

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++    A        P   V     +  V     A  LG 
Sbjct: 87  RLGIPHYVLD---FETRFRETVIDTFAQSYASGETPVPCVACNQFVKFVDLFETAKDLGA 143

Query: 129 TNIV--IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL---KKYETWKL 183
             +     +      G          A + +  L   +   +      L    K +  +L
Sbjct: 144 DALATGHYIASRPGRGGRGLYRAMDAARDQSYFLFATTRPQLDMLRFPLGEYAKPDVREL 203

Query: 184 AQD 186
           A+ 
Sbjct: 204 ARR 206


>gi|254588106|ref|NP_956881.2| GMP synthase [Danio rerio]
 gi|220672808|emb|CAX14207.1| guanine monphosphate synthetase [Danio rerio]
          Length = 692

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 54/201 (26%), Gaps = 19/201 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               L+L SGG DS+ C +        ++V  +  D G   K E +       K+   + 
Sbjct: 235 KSKVLVLLSGGVDSTVCTALLNKALNQEQVIAVHIDNGFMRKRESQSVEEALTKLGIKLK 294

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
               +    H                       +  N+       R II   F       
Sbjct: 295 VVNAA----HTFYNGTTTLPISEEDRTPRKRISKTLNMTTNPEEKRKIIGDTFVKVANEV 350

Query: 126 LGITNI-------------VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
           +G  N+                +    +              +T +   +     V  PL
Sbjct: 351 IGEMNLKPEDVYLAQGTLRPDLIESASHLASGKAEVIKTHHNDTELIRKLRDEGKVIEPL 410

Query: 173 MWLKKYETWKLAQDIGGQDLV 193
               K E   L +++G  + +
Sbjct: 411 KDFHKDEVRALGRELGLPEEI 431


>gi|225850620|ref|YP_002730854.1| thiamine biosynthesis protein [Persephonella marina EX-H1]
 gi|225645577|gb|ACO03763.1| thiamine biosynthesis protein [Persephonella marina EX-H1]
          Length = 352

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/180 (11%), Positives = 48/180 (26%), Gaps = 5/180 (2%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK-- 58
           M   +K    A+ L+SGG DS+  +    ++   V  + F  G         R   ++  
Sbjct: 1   MLGKMK-GKKAVALYSGGLDSTLAIKLIQNQGIDVTAVHFYTGFCITETKRRRGEKKEDG 59

Query: 59  --KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
              +   +        +  I+ ++       ++        I        F+  +    +
Sbjct: 60  SHYMNPALKYAAKYGFKLEIVDISDEYFNIVTNPKYGYGSNINPCIDCRAFMYKKAREIM 119

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
                     G       + +   +     R   +  +            T+     W+ 
Sbjct: 120 EDIGADFLVSGEVLNQRPMSQHLKAMKIIEREAGVEGLVVKPLSAKVLPPTIPEIRGWVD 179


>gi|294807986|ref|ZP_06766763.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Bacteroides xylanisolvens SD CC 1b]
 gi|294444799|gb|EFG13489.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Bacteroides xylanisolvens SD CC 1b]
          Length = 450

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 52/183 (28%), Gaps = 20/183 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +  L    + +  +  ++G   K E E        +     + 
Sbjct: 156 KKVLLALSGGVDSSVVAALLLKAIGNNLVCVHVNHGLMRKGESE------DVVEVFSNQL 209

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           K +L    +     L  ++     +     I    +       R +             G
Sbjct: 210 KANLIYVDVTD-RFLNKLAGVEDPEQKRKIIGGEFIRVFEEEARKL------------NG 256

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           +++      L  +    +  PL  L K E      ++
Sbjct: 257 IDFLGQGTIYPDIVESGTKTAKMVKSHHNVGGLPEDLKFELVEPLRQLFKDEVRACGLEL 316

Query: 188 GGQ 190
           G  
Sbjct: 317 GLP 319


>gi|237712767|ref|ZP_04543248.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262409743|ref|ZP_06086281.1| GMP synthase domain-containing protein [Bacteroides sp. 2_1_22]
 gi|294645358|ref|ZP_06723069.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Bacteroides ovatus SD CC 2a]
 gi|298483134|ref|ZP_07001314.1| GMP synthase, C- domain protein [Bacteroides sp. D22]
 gi|229447179|gb|EEO52970.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262352396|gb|EEZ01498.1| GMP synthase domain-containing protein [Bacteroides sp. 2_1_22]
 gi|292639296|gb|EFF57603.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Bacteroides ovatus SD CC 2a]
 gi|295084597|emb|CBK66120.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain or B
           subunit [Bacteroides xylanisolvens XB1A]
 gi|298270651|gb|EFI12232.1| GMP synthase, C- domain protein [Bacteroides sp. D22]
          Length = 435

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 52/183 (28%), Gaps = 20/183 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +  L    + +  +  ++G   K E E        +     + 
Sbjct: 141 KKVLLALSGGVDSSVVAALLLKAIGNNLVCVHVNHGLMRKGESE------DVVEVFSNQL 194

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           K +L    +     L  ++     +     I    +       R +             G
Sbjct: 195 KANLIYVDVTD-RFLNKLAGVEDPEQKRKIIGGEFIRVFEEEARKL------------NG 241

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           +++      L  +    +  PL  L K E      ++
Sbjct: 242 IDFLGQGTIYPDIVESGTKTAKMVKSHHNVGGLPEDLKFELVEPLRQLFKDEVRACGLEL 301

Query: 188 GGQ 190
           G  
Sbjct: 302 GLP 304


>gi|261210711|ref|ZP_05925003.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio sp. RC341]
 gi|260840196|gb|EEX66776.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio sp. RC341]
          Length = 371

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 55/190 (28%), Gaps = 11/190 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +  +VE L     + +  E  C     + + +   
Sbjct: 8   NSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYC--TAAEDLADAQA 65

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    H +      +   +     +A            +  + I F  F       
Sbjct: 66  VCDKLDIPLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEFADEV 123

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH-------TPLMWLKKY 178
           L    I +G            +   +R ++   +     +   H        P+  L+K 
Sbjct: 124 LDADYIAMGHYVRRTFPQNGEKPQMLRGLDNNKDQSYFLYTLSHEQVARSLFPVGELEKP 183

Query: 179 ETWKLAQDIG 188
           E  ++A++ G
Sbjct: 184 EVRRIAEEQG 193


>gi|330827143|ref|YP_004390446.1| tRNA-specific 2-thiouridylase mnmA [Alicycliphilus denitrificans
           K601]
 gi|329312515|gb|AEB86930.1| tRNA-specific 2-thiouridylase mnmA [Alicycliphilus denitrificans
           K601]
          Length = 373

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 47/193 (24%), Gaps = 12/193 (6%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DS+        +   V  +     + +     C         + + 
Sbjct: 4   STKQRVVVGLSGGVDSAVTAHLLKQQGHEVVGIFMKNWEDDDDSEYCSSRQ-----DFLD 58

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
               +      +            +      + Q    PN  V     I        A R
Sbjct: 59  AASVADVIGIEIEHVNFAAEYKDRVFAEFLREYQAGRTPNPDVLCNAEIKFKAFLDHAMR 118

Query: 126 LGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWLKKY 178
           LG   I  G                                L  E       P+  L+K 
Sbjct: 119 LGAEKIATGHYARVRHNPATGLFELLKGLDPAKDQSYFLHRLNQEQLARTLFPVGELRKT 178

Query: 179 ETWKLAQDIGGQD 191
           E  ++A++IG  +
Sbjct: 179 EVRRIAEEIGLPN 191


>gi|150025823|ref|YP_001296649.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Flavobacterium psychrophilum JIP02/86]
 gi|205816862|sp|A6H0G9|MNMA_FLAPJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|149772364|emb|CAL43842.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Flavobacterium psychrophilum JIP02/86]
          Length = 395

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 35/135 (25%), Gaps = 3/135 (2%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS       ++   V  L       + V +       +   + +   +
Sbjct: 2   KRVVVGLSGGVDSSVAAYLLQEQGYEVIGLFMKNWHDDSVTISNECPWLEDSNDALLVAE 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   +    L       +   +  + +    PN  V     I       +A  LG 
Sbjct: 62  KLGIPFQTVD---LSQQYQEKIVDYMFSEYKKGRTPNPDVLCNREIKFDVFMKIALSLGA 118

Query: 129 TNIVIGVCETDYSGY 143
             +  G         
Sbjct: 119 DYVATGHYCRKGEIE 133


>gi|148380860|ref|YP_001255401.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum A str. ATCC 3502]
 gi|153934263|ref|YP_001385167.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum A str. ATCC 19397]
 gi|153935159|ref|YP_001388636.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum A str. Hall]
 gi|205810535|sp|A7FXG3|MNMA2_CLOB1 RecName: Full=tRNA-specific 2-thiouridylase mnmA 2
 gi|205810559|sp|A5I5Y9|MNMA2_CLOBH RecName: Full=tRNA-specific 2-thiouridylase mnmA 2
 gi|148290344|emb|CAL84469.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum A str. ATCC 3502]
 gi|152930307|gb|ABS35807.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum A str. ATCC 19397]
 gi|152931073|gb|ABS36572.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum A str. Hall]
          Length = 353

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 47/173 (27%), Gaps = 11/173 (6%)

Query: 7   KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL------ECRLCVRKK 59
            +   + L  SGG DSS       +R   V  +  D  +  +         E    V +K
Sbjct: 1   MSKGIVALAMSGGVDSSVSAYILKERGYDVIGIYMDLWRDERKGYCNKSAAEDARRVAEK 60

Query: 60  IVELMPKWK-DSLGEDHILPLAI---LGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
           +         +   +D+++   I   L   + +           +         G + + 
Sbjct: 61  LDIPFHVINIEKKFKDNVIDYFIDEYLSGRTPNPCVACNKTIKFEAFFNAAKEFGADFMA 120

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV 168
                 +  R G   IV    +     Y        +   T +  G      +
Sbjct: 121 TGHYCKIEERNGRKVIVKAEDDKKDQTYMMYNLKQYQLERTIMPCGEYKKDHI 173


>gi|160881034|ref|YP_001560002.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium phytofermentans ISDg]
 gi|205813731|sp|A9KPI9|MNMA_CLOPH RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|160429700|gb|ABX43263.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium phytofermentans ISDg]
          Length = 357

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 49/186 (26%), Gaps = 6/186 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS       +    V  ++    Q    +          +  +    +
Sbjct: 2   KKVVVGMSGGVDSSVAAYLLKEAGYDVIGVTMQIWQDEDNQTVEENGGCCGLSAVDDARR 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +   D    +        +++      + Q    PN  +     +      T + ++G 
Sbjct: 62  VANSLDIPYYVMNFKSEFKANVMDYFVKEYQAGRTPNPCIACNRYVKWESLLTRSLQIGA 121

Query: 129 TNIVIGVCETDYSGY------PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
             I  G      +                       NL  +       P+    K E  +
Sbjct: 122 DYIATGHYARIVTLPNGRFALKKSATAAKDQTYALYNLTQDQLSKTLMPVGEYTKEEVRE 181

Query: 183 LAQDIG 188
           +A  IG
Sbjct: 182 IAAKIG 187


>gi|85375520|ref|YP_459582.1| tRNA-specific 2-thiouridylase MnmA [Erythrobacter litoralis
           HTCC2594]
 gi|122543295|sp|Q2N6A6|MNMA_ERYLH RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|84788603|gb|ABC64785.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Erythrobacter litoralis HTCC2594]
          Length = 384

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 52/198 (26%), Gaps = 15/198 (7%)

Query: 1   MNDIIKKA--PSALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLC 55
           M D+ + A     ++  SGG DSS   + A      V  ++   +DYG       +   C
Sbjct: 16  MFDLPRPAAESRIVVAMSGGVDSSVVAALAHASGAEVIGITLQLYDYG--AATGRKGACC 73

Query: 56  VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
               I +            ++             + +  A        P   +       
Sbjct: 74  AGDDIQDARAVADRLGIAHYVFDHESA---FREDVVEQFADDYLSGRTPVPCIRCNMGPK 130

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPD---CRHDTIRAIETAINLGMESHVTVHTPL 172
                 +A  LG   +  G      +G       R       ++    G           
Sbjct: 131 FTDLLRMARELGADCLATGHYVRRVAGEHGPELHRALDPARDQSYFLYGTTETQLDFLRF 190

Query: 173 M--WLKKYETWKLAQDIG 188
               L K    +LA+  G
Sbjct: 191 PLGDLPKTAVRELAEAAG 208


>gi|170289597|ref|YP_001739835.1| PP-loop domain-containing protein [Thermotoga sp. RQ2]
 gi|170177100|gb|ACB10152.1| PP-loop domain protein [Thermotoga sp. RQ2]
          Length = 268

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 49/172 (28%), Gaps = 5/172 (2%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
           ++ IK     +++FSGG DS+     A +        L+ D     + E+E    +   I
Sbjct: 8   SEAIKSKKKLVVMFSGGVDSTLLAKLAYEALGKNAVALTIDSPVIPRKEIEEAKNLANLI 67

Query: 61  VELMPKWKDS-LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                  + + L   H++            L  N+       N  +    G N   L   
Sbjct: 68  GIRHEFIELNELKSRHLIENPPDRCYLCRKLRDNIVKNWARENGFDVIADGLNFSDLQDY 127

Query: 120 ATLAY---RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV 168
                     GI +  I    T        R   +   +      + S    
Sbjct: 128 RPGVKASTEDGIWHPFIDFEVTKEEIREYSRKLGLPTWDKPAMACLCSRFPY 179


>gi|152995561|ref|YP_001340396.1| argininosuccinate synthase [Marinomonas sp. MWYL1]
 gi|189046393|sp|A6VVI2|ASSY_MARMS RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|150836485|gb|ABR70461.1| Argininosuccinate synthase [Marinomonas sp. MWYL1]
          Length = 410

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 48/158 (30%), Gaps = 9/158 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S    W  + +   V T + D GQ  +VE          I E+
Sbjct: 1   MSDVKKVVLAYSGGLDTSVIAKWLQEEYNCEVVTFTADLGQGEEVEPARAKAQALGIKEI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                ++    D + P+         + T      +   ++    +  R I         
Sbjct: 61  YIEDLREEFVRDFVFPM-------FRANTIYEGEYLLGTSIARPLIAKRLIEIANETGAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         +   Y       + A     +L
Sbjct: 114 AISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDL 151


>gi|294102033|ref|YP_003553891.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
          [Aminobacterium colombiense DSM 12261]
 gi|293617013|gb|ADE57167.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
          [Aminobacterium colombiense DSM 12261]
          Length = 352

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 12/88 (13%), Positives = 22/88 (25%), Gaps = 1/88 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY-GQRNKVELECRLCVRKKIVELMP 65
               L+  SGG DS+        +   V  + F   G    V       + +K+     
Sbjct: 1  MKKKVLVGMSGGLDSAVTSLLLKKQGYEVVGVFFALSGADESVAERQAADLAQKLDIKFE 60

Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKN 93
           +         +   +L           
Sbjct: 61 VYDGRELFQKNVLTKLLSAYEKGMTPNP 88


>gi|91226036|ref|ZP_01260963.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio alginolyticus 12G01]
 gi|91189477|gb|EAS75754.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio alginolyticus 12G01]
          Length = 374

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 52/193 (26%), Gaps = 13/193 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +VE L     + +  E  C     + +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYC--TAAEDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +            H +      +   +     +A            +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIHLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDT-------IRAIETAINLGMESHVTVHTPLM 173
                L    I +G            +                   L  E       P+ 
Sbjct: 115 FADEVLDADYIAMGHYVRRSFPENGEKPQMLRGLDGNKDQSYFLYTLSNEQIARSLFPVG 174

Query: 174 WLKKYETWKLAQD 186
            L+K E  ++A++
Sbjct: 175 DLEKPEVRRIAEE 187


>gi|300715577|ref|YP_003740380.1| thiamine biosynthesis protein ThiI [Erwinia billingiae Eb661]
 gi|299061413|emb|CAX58525.1| Thiamine biosynthesis protein ThiI [Erwinia billingiae Eb661]
          Length = 482

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 54/182 (29%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R  +  
Sbjct: 231 FGRSHKVRFVAIN-------FEPVVGEILEKVEDGQMGVVLKRMMVRAASQIAERYDVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K     LA+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIINLARHIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|331085021|ref|ZP_08334108.1| tRNA-specific 2-thiouridylase mnmA [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330408721|gb|EGG88186.1| tRNA-specific 2-thiouridylase mnmA [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 357

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 45/190 (23%), Gaps = 12/190 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ---RNKVELECRLCVRKKIVEL 63
                ++  SGG DSS       ++   V  ++    Q   R   E     C    + + 
Sbjct: 1   MKKKVVVGMSGGVDSSVAAYLLKEQGYDVIGVTMQIWQDEDRAVEEENGGCCGLSAVDDA 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      +++            +      +      PN  +     +        +
Sbjct: 61  RRVAAALEIPYYVMN---FKKEFKEKVIDYFVQEYLHGRTPNPCIACNRYVKWESLLKRS 117

Query: 124 YRLGITNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
             +G   I  G                              NL  E       P+    K
Sbjct: 118 MDIGADYIATGHYARVVQLENGRYTLKCSATLAKDQTYALYNLTQEQLKRTLMPVGEYTK 177

Query: 178 YETWKLAQDI 187
            +  ++A+ I
Sbjct: 178 DQVREIAEKI 187


>gi|293392562|ref|ZP_06636882.1| thiamine biosynthesis protein ThiI [Serratia odorifera DSM 4582]
 gi|291424964|gb|EFE98173.1| thiamine biosynthesis protein ThiI [Serratia odorifera DSM 4582]
          Length = 482

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            + L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VMSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------SAHEI--GVKQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHKVRFVAI-------DFEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K     +A+ IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIINVARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|260435923|ref|ZP_05789893.1| GMP synthase [Synechococcus sp. WH 8109]
 gi|260413797|gb|EEX07093.1| GMP synthase [Synechococcus sp. WH 8109]
          Length = 528

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 50/191 (26%), Gaps = 19/191 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSST          D++  +  D G   K E E               
Sbjct: 224 NKRVLLALSGGVDSSTLAFLLKKAIGDQLTCMFIDQGFMRKGEPEF-------------- 269

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D       + +  +                ++          R              L
Sbjct: 270 LMDFFDRKFNIHVEYINARQRFIGKLKGITDPEEKRKIIGTEFIRVFEEESKRLGPFDYL 329

Query: 127 GITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
               +   V E+  +       +     I++      L  +    +  PL  L K E  K
Sbjct: 330 AQGTLYPDVIESAGTNVDPKTGERVAVKIKSHHNVGGLPKDLQFKLVEPLRKLFKDEVRK 389

Query: 183 LAQDIGGQDLV 193
           + + +G  + +
Sbjct: 390 VGRSLGLPEEI 400


>gi|312958461|ref|ZP_07772981.1| tRNA sulfurtransferase [Pseudomonas fluorescens WH6]
 gi|311287004|gb|EFQ65565.1| tRNA sulfurtransferase [Pseudomonas fluorescens WH6]
          Length = 505

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 57/183 (31%), Gaps = 29/183 (15%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWKD 69
           L+L SGG DS+      + R        F+ G R      +E    + KK          
Sbjct: 204 LVLMSGGFDSTVAAYQIMRRGLMSHFCFFNLGGRAHELGVMEVAHFIWKKYG-------- 255

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     +    +  S   + V  +I      +        + L  A+ +A +L I 
Sbjct: 256 ----------SSQRVLFVSVPFEEVLGEILGKVDNSHMGVVLKRMMLRAASRIADQLQID 305

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G   +  S         I  +   +         V  PL+   K +   LA+ IG 
Sbjct: 306 ALVTGEAISQVSSQTLPNLSLIDCVTEKL---------VLRPLIASHKQDIIDLAEQIGT 356

Query: 190 QDL 192
            D 
Sbjct: 357 ADF 359


>gi|89073381|ref|ZP_01159905.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Photobacterium sp. SKA34]
 gi|89050868|gb|EAR56342.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Photobacterium sp. SKA34]
          Length = 371

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 55/194 (28%), Gaps = 14/194 (7%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS      L +  +VE L     + +  +  C     + +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLLQQGYQVEGLFMKNWEEDDNDEYCS--AAEDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +            H +      +   +     +A            +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIPLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETD------YSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPL 172
                L    I +G                  R       ++     L  E       P+
Sbjct: 115 FADEVLEADYIAMGHYTRRSFPTAEGDKPQMLRGVDNNKDQSYFLYTLSHEQIARSLFPV 174

Query: 173 MWLKKYETWKLAQD 186
             L+K E  ++A++
Sbjct: 175 GELEKPEVRRIAEE 188


>gi|319764949|ref|YP_004128886.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Alicycliphilus denitrificans BC]
 gi|317119510|gb|ADV01999.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Alicycliphilus denitrificans BC]
          Length = 373

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 47/193 (24%), Gaps = 12/193 (6%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DS+        +   V  +     + +     C         + + 
Sbjct: 4   STKQRVVVGLSGGVDSAVTAHLLKQQGHEVVGIFMKNWEDDDDSEYCSSRQ-----DFLD 58

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
               +      +            +      + Q    PN  V     I        A R
Sbjct: 59  AASVADVIGIEIEHVNFAAEYKDRVFAEFLREYQAGRTPNPDVLCNAEIKFKAFLDHAMR 118

Query: 126 LGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWLKKY 178
           LG   I  G                                L  E       P+  L+K 
Sbjct: 119 LGAEKIATGHYARVRHNPATGLFELLKGLDPAKDQSYFLHRLNQEQLARTLFPVGELRKT 178

Query: 179 ETWKLAQDIGGQD 191
           E  ++A++IG  +
Sbjct: 179 EVRRIAEEIGLPN 191


>gi|296282649|ref|ZP_06860647.1| argininosuccinate synthase [Citromicrobium bathyomarinum JL354]
          Length = 412

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 60/182 (32%), Gaps = 7/182 (3%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           M++        +L +SGG D+S    W  ++R   V T + D GQ  ++E   R      
Sbjct: 1   MSNNASTNNRVVLAYSGGLDTSVIAKWLEVERGLEVVTFTADLGQGEELEPARRKAQAMG 60

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           I +    + + L E+ +            +  +     +   ++    +  R +      
Sbjct: 61  IPD-KHIFIEDLREEFVRDFVF---PMMRANARYEGDYLLGTSIARPLISKRLVEIARET 116

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKK 177
              A   G T         + S Y      T+ A     +L   + +     +  + + K
Sbjct: 117 GAGAIAHGATGKGNDQVRFELSAYALDPDVTVIAPWREWDLTSRTALIAWAESHQIEVPK 176

Query: 178 YE 179
            +
Sbjct: 177 DK 178


>gi|257465621|ref|ZP_05629992.1| thiamine biosynthesis protein ThiI [Actinobacillus minor 202]
 gi|257451281|gb|EEV25324.1| thiamine biosynthesis protein ThiI [Actinobacillus minor 202]
          Length = 483

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 53/182 (29%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W   
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWSRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + + V        L    V   + I        A R  I  
Sbjct: 232 SSSHKVRFVAINFENVVGEILEKVDNGQMGVVLKRMMVRAASKI--------AERFDIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I      +         V  PL+   K +   +A++IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDKASDTL---------VLRPLITHDKEQIIAMAKEIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|240949560|ref|ZP_04753899.1| thiamine biosynthesis protein ThiI [Actinobacillus minor NM305]
 gi|240296001|gb|EER46667.1| thiamine biosynthesis protein ThiI [Actinobacillus minor NM305]
          Length = 483

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 53/182 (29%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W   
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWSRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + + V        L    V   + I        A R  I  
Sbjct: 232 SSSHKVRFVAINFENVVGEILEKVDNGQMGVVLKRMMVRAASKI--------AERFDIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I      +         V  PL+   K +   +A++IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDKASDTL---------VLRPLITHDKEQIIAMAKEIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|197335100|ref|YP_002155479.1| thiamine biosynthesis/tRNA modification protein ThiI [Vibrio
           fischeri MJ11]
 gi|226729110|sp|B5FBH1|THII_VIBFM RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|197316590|gb|ACH66037.1| thiamine biosynthesis/tRNA modification protein ThiI [Vibrio
           fischeri MJ11]
          Length = 482

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 27/183 (14%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV-RKKIVELMPKWKD 69
            L L SGG DS       + R  +V  L F+ G            +  K++   + K   
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYLFFNLGGP-------AHEIGVKQVSHFLWKKYG 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           S  +   + +              V  +I +             +F+     +A + GI 
Sbjct: 233 SSAKVKFISVDF----------DPVVAEILEKVDDGQMGVILKRMFMRAGGMVAEKFGIE 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      S         I  +  ++         +  PL+   K +   LA++IG 
Sbjct: 283 GLVTGEALGQVSSQTLTNLRHIDNVTDSL---------ILRPLINWDKEDIIDLAREIGT 333

Query: 190 QDL 192
           +D 
Sbjct: 334 EDF 336


>gi|149175981|ref|ZP_01854598.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Planctomyces maris DSM 8797]
 gi|148845135|gb|EDL59481.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Planctomyces maris DSM 8797]
          Length = 369

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 55/205 (26%), Gaps = 27/205 (13%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK-----IV 61
            +   +L  SGG DSS      L++   V  L    G       E    +  K     + 
Sbjct: 1   MSQRVVLAMSGGVDSSAAAHLLLEQGYEVIGLFMRSG----ATEETACAIEDKNSLPVLN 56

Query: 62  ELMPK-----WKDSLGEDHILPLAI--LGDISHSSLTKNVAMKIQDNN----LPNTFVPG 110
               K       D+     +  +       ++       +     D       PN  V  
Sbjct: 57  LKAHKQGCCSASDAADARRVADMLDIPFHALNFKDAFGRIKDYFADEYLAGRTPNPCVMC 116

Query: 111 RNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGME 163
            N +        A ++G + I  G      S   + +         +         +   
Sbjct: 117 NNWLKFGKLWEFAEQVGASYISTGHYAQLTSLPDETQPALIRGLDRSKDQSYVLFGINRG 176

Query: 164 SHVTVHTPLMWLKKYETWKLAQDIG 188
               +  P+    K E  ++A + G
Sbjct: 177 LLDKIIFPVGGFVKPEIREMAGEAG 201


>gi|148269543|ref|YP_001244003.1| tRNA-specific 2-thiouridylase MnmA [Thermotoga petrophila RKU-1]
 gi|166235088|sp|A5IJQ4|MNMA_THEP1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|147735087|gb|ABQ46427.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermotoga petrophila RKU-1]
          Length = 358

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 48/188 (25%), Gaps = 16/188 (8%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI-------VELMP 65
           +  SGG DS+  L   L     V+          + E   R  ++KK+        + M 
Sbjct: 5   VALSGGVDSAVALYLLLKEGHEVKAFHMKTK---EDEFFIRKEIKKKVCCSPSDTADAMR 61

Query: 66  KWKDSLGEDHILPLAILG-----DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                  E  I+ +  +      +   S L K +      +              L    
Sbjct: 62  IAHFLGVEIEIVDVKEIFREKVIEPFKSDLLKGLTPNPCVHCNRFVKFGYLMDYVLNQGF 121

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
                     I                    ++   A          +    ++  K E 
Sbjct: 122 DAFASGHYARIEFSEKYGRKVIKKGVDLKKDQSYFLARIEPWRIERLIFPNGIY-TKEEI 180

Query: 181 WKLAQDIG 188
            K+A++ G
Sbjct: 181 RKIAEEAG 188


>gi|59711323|ref|YP_204099.1| thiamine biosynthesis protein ThiI [Vibrio fischeri ES114]
 gi|71658007|sp|Q5E6Y5|THII_VIBF1 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|59479424|gb|AAW85211.1| sulfurtransferase required for thiamine and 4-thiouridine
           biosynthesis [Vibrio fischeri ES114]
          Length = 482

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 27/183 (14%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV-RKKIVELMPKWKD 69
            L L SGG DS       + R  +V  L F+ G            +  K++   + K   
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYLFFNLGGP-------AHEIGVKQVSHFLWKKYG 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           S  +   + +              V  +I +             +F+     +A + GI 
Sbjct: 233 SSAKVKFISVDF----------DPVVAEILEKVDDGQMGVILKRMFMRAGGMVAEKFGIE 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      S         I  +  ++         +  PL+   K +   LA++IG 
Sbjct: 283 GLVTGEALGQVSSQTLTNLRHIDNVTDSL---------ILRPLINWDKEDIIDLAREIGT 333

Query: 190 QDL 192
           +D 
Sbjct: 334 EDF 336


>gi|329957022|ref|ZP_08297590.1| GMP synthase domain protein [Bacteroides clarus YIT 12056]
 gi|328523779|gb|EGF50871.1| GMP synthase domain protein [Bacteroides clarus YIT 12056]
          Length = 435

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 53/182 (29%), Gaps = 20/182 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +  L    D +  +  ++G   K E E  + + K   +L     
Sbjct: 142 KVLLALSGGVDSSVVAALLLKAIGDNLVCVHVNHGLMRKGESEAVIEIFK--NKLNANLV 199

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                D  L       ++  +  +     I    +       R +             GI
Sbjct: 200 YVDATDRFLD-----KLAGVADPEQKRKIIGGEFIRVFEEEARKLD------------GI 242

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G    D           +++      L  +    +  PL  L K E      ++G
Sbjct: 243 DFLGQGTIYPDIVESGTKTAKMVKSHHNVGGLPEDLQFELVEPLRQLFKDEVRACGLELG 302

Query: 189 GQ 190
             
Sbjct: 303 LP 304


>gi|153835174|ref|ZP_01987841.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio harveyi HY01]
 gi|148868331|gb|EDL67456.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio harveyi HY01]
          Length = 374

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 52/193 (26%), Gaps = 13/193 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +VE L     + +  E  C     + +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYC--TAAEDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +            H +      +   +     +A            +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIHLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDT-------IRAIETAINLGMESHVTVHTPLM 173
                L    I +G            +                   L  E       P+ 
Sbjct: 115 FADEVLDADYIAMGHYVRRSFPENGEKPQMLRGLDSNKDQSYFLYTLSNEQIARSLFPVG 174

Query: 174 WLKKYETWKLAQD 186
            L+K E  ++A++
Sbjct: 175 DLEKPEVRRIAEE 187


>gi|229515510|ref|ZP_04404969.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae TMA 21]
 gi|229520442|ref|ZP_04409867.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae TM 11079-80]
 gi|229525739|ref|ZP_04415144.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae bv. albensis VL426]
 gi|229529783|ref|ZP_04419173.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae 12129(1)]
 gi|229333557|gb|EEN99043.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae 12129(1)]
 gi|229339320|gb|EEO04337.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae bv. albensis VL426]
 gi|229342540|gb|EEO07533.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae TM 11079-80]
 gi|229347279|gb|EEO12239.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae TMA 21]
 gi|327483833|gb|AEA78240.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Vibrio cholerae LMA3894-4]
          Length = 371

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 50/190 (26%), Gaps = 11/190 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +  +VE L     + +  E  C     + + +   
Sbjct: 8   NSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYC--TAAEDLADAQA 65

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    H +      +   +     +A            +  + I F  F       
Sbjct: 66  VCDKLGIPLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEFADEV 123

Query: 126 LGITNIVIGVCETDYSGYPDCRHDT-------IRAIETAINLGMESHVTVHTPLMWLKKY 178
           L    I +G            +                   L  E       P+  L+K 
Sbjct: 124 LDADYIAMGHYVRRTFPQNGEKPQMLRGLDGNKDQSYFLYTLSHEQVARSLFPVGELEKP 183

Query: 179 ETWKLAQDIG 188
           E  ++A++ G
Sbjct: 184 EVRRIAEEQG 193


>gi|113474569|ref|YP_720630.1| tRNA-specific 2-thiouridylase MnmA [Trichodesmium erythraeum
           IMS101]
 gi|123352667|sp|Q118B7|MNMA_TRIEI RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|110165617|gb|ABG50157.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Trichodesmium erythraeum IMS101]
          Length = 359

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 57/187 (30%), Gaps = 15/187 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSST  +    +  +VE L+        +      C  + +V+     +
Sbjct: 2   NKIIVGLSGGVDSSTAAAILHHQGYQVEGLTL------WLMKGKGQCCSEGMVDAAYICE 55

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 HI+    L   +       V                + + F    A    +LGI
Sbjct: 56  QLDIPHHIVDTRNLFQANIVDYL--VTGYSAGITPLPCSQCNKTVKFGPMLAYGREKLGI 113

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW-------LKKYETW 181
             I  G            R+   RAI+   +     +      L         + K ET 
Sbjct: 114 DKIATGHYARLDYDSKSDRYLLKRAIDRNKDQSYFLYDLTQYLLAGSVFPLGEMVKSETR 173

Query: 182 KLAQDIG 188
           ++A + G
Sbjct: 174 RIAAEYG 180


>gi|300868100|ref|ZP_07112736.1| tRNA-specific 2-thiouridylase mnmA [Oscillatoria sp. PCC 6506]
 gi|300333898|emb|CBN57914.1| tRNA-specific 2-thiouridylase mnmA [Oscillatoria sp. PCC 6506]
          Length = 352

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 54/187 (28%), Gaps = 15/187 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSST  +    +   V  L+        +      C  + +V+     +
Sbjct: 2   NKIVVGLSGGVDSSTAAAILHHQGYEVVGLTL------WLMKGKGQCCSEGMVDAAQICE 55

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                  I+    L   S       V                R + F         +LGI
Sbjct: 56  QLGIPHEIVDSRDLFQASIVDYL--VEGYGAGITPLPCSQCNRTVKFGPMLRYAREKLGI 113

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME-------SHVTVHTPLMWLKKYETW 181
             I  G            R+   RA+++  +                  PL  + K ET 
Sbjct: 114 EKIATGHYAQISYDGSVDRYQLRRAVDSTKDQSYFLYDLTQEMLAGSVFPLGDIAKTETR 173

Query: 182 KLAQDIG 188
           ++A + G
Sbjct: 174 RIAAEFG 180


>gi|332187411|ref|ZP_08389149.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sphingomonas sp. S17]
 gi|332012572|gb|EGI54639.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sphingomonas sp. S17]
          Length = 365

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 47/184 (25%), Gaps = 3/184 (1%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
           +A   ++  SGG DSS   + A         ++   Y     V      C  + I +   
Sbjct: 11  RAKRIVVAMSGGVDSSVVAALAHATGAETIGVTLQLYDHGEAVGRAGACCAGRDIRDARA 70

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL--A 123
                    ++                +  +  +          G     L+  A    A
Sbjct: 71  VCDRLGIAHYVFDHEDSFRTQVVDRFADEYLAGRTPIPCVQCNMGPKFTDLLKLARDLGA 130

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             L   + V  V  T  +                     E    +  PL  L K    ++
Sbjct: 131 DCLATGHYVRRVEGTHGAELHRGADPARDQSYFLFATTQEQLNFLRFPLGALPKSRVREI 190

Query: 184 AQDI 187
           A ++
Sbjct: 191 AAEL 194


>gi|326572739|gb|EGE22725.1| thiamine biosynthesis protein ThiI [Moraxella catarrhalis BC7]
          Length = 496

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 60/189 (31%), Gaps = 27/189 (14%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY-GQRNKVELECRLCVRKKIVEL 63
           +      L L SGG DS       + R  RV    F+  GQ +++ ++            
Sbjct: 184 MSTQEDVLSLISGGFDSGVASHMFMRRGSRVHYCFFNLGGQAHELGVKQM---------A 234

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              W        +           +   + V  +I               + +  A+ +A
Sbjct: 235 YHLWSRYSLSHKV--------WFITVDFEPVVAEILKTIDDGHMGVVLKRMMVKAASQIA 286

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            ++ I  +V G      +       + I A  + +         +  PL+   K +  K+
Sbjct: 287 QQIKIQALVTGEAMGQVASQTLTNLNAIDAASSTL---------ILRPLITSDKEDIIKM 337

Query: 184 AQDIGGQDL 192
           A+ IG  ++
Sbjct: 338 AEKIGTANI 346


>gi|260772624|ref|ZP_05881540.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio metschnikovii CIP 69.14]
 gi|260611763|gb|EEX36966.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio metschnikovii CIP 69.14]
          Length = 372

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 51/194 (26%), Gaps = 11/194 (5%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           N         ++  SGG DSS        +  +VE L     + +  E  C     + + 
Sbjct: 4   NRSANSQKKVIVGMSGGVDSSVSAYLLQQQGYQVEGLFMKNWEEDDNEEYC--TAAEDLA 61

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +            H +      +   +     +A            +  + I F  F   
Sbjct: 62  DAQAVCDKLGIYLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEF 119

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDT-------IRAIETAINLGMESHVTVHTPLMW 174
               L    I +G            +                   L  E       P+  
Sbjct: 120 ADEVLDADYIAMGHYVRRTFPTQGEKPQMLRGLDSNKDQSYFLYTLSHEQVARSLFPVGE 179

Query: 175 LKKYETWKLAQDIG 188
           L+K E  ++A++ G
Sbjct: 180 LEKPEVRRIAEEQG 193


>gi|126173600|ref|YP_001049749.1| thiamine biosynthesis protein ThiI [Shewanella baltica OS155]
 gi|152999880|ref|YP_001365561.1| thiamine biosynthesis protein ThiI [Shewanella baltica OS185]
 gi|160874505|ref|YP_001553821.1| thiamine biosynthesis protein ThiI [Shewanella baltica OS195]
 gi|217974156|ref|YP_002358907.1| thiamine biosynthesis protein ThiI [Shewanella baltica OS223]
 gi|304409471|ref|ZP_07391091.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
           baltica OS183]
 gi|307303829|ref|ZP_07583582.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
           baltica BA175]
 gi|189030646|sp|A3D2B7|THII_SHEB5 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|189030647|sp|A6WL09|THII_SHEB8 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|189030648|sp|A9KTM0|THII_SHEB9 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|254784230|sp|B8EAU2|THII_SHEB2 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|125996805|gb|ABN60880.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
           baltica OS155]
 gi|151364498|gb|ABS07498.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
           baltica OS185]
 gi|160860027|gb|ABX48561.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
           baltica OS195]
 gi|217499291|gb|ACK47484.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
           baltica OS223]
 gi|304351989|gb|EFM16387.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
           baltica OS183]
 gi|306912727|gb|EFN43150.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
           baltica BA175]
 gi|315266743|gb|ADT93596.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
           baltica OS678]
          Length = 484

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 60/188 (31%), Gaps = 25/188 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      L L SGG DS       + +  R     F+ G         +  +   + ++ 
Sbjct: 176 MATQEDVLSLISGGFDSGVSSYQFIKKGARTHYCFFNLGG-------AQHEI--GVKQVA 226

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                + GE H +          S   + V  +I +             + +  AA +A 
Sbjct: 227 YHLWKTYGESHKVKFI-------SVPFEPVVAEILERIDNGQMGVVLKRMMMRTAARIAD 279

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           R+GI  +V G      S       + I      +         +  PL+ + K +    +
Sbjct: 280 RMGIQALVTGESLGQVSSQTLTNLNVIDRCTELL---------ILRPLIAMDKQDIINES 330

Query: 185 QDIGGQDL 192
           + IG +D 
Sbjct: 331 RKIGTEDF 338


>gi|325187233|emb|CCA21772.1| tRNA(Ile)lysidine synthase putative [Albugo laibachii Nc14]
          Length = 660

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 46/190 (24%), Gaps = 31/190 (16%)

Query: 13  LLFSGGQDSSTCLSWALD-----RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  SGG DS               +  +  +  DYG R +   EC           +  W
Sbjct: 226 VSLSGGVDSMVLAYLLHKVRLSSHYYGIVAIHIDYGNRPESAAECS---------YVKYW 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D L                    + +    +     + +      I      ++  +  
Sbjct: 277 CDRLDIQF--------------YARRIDEVTRGETKRDEYEKIARDIRYSTYRSILEKHS 322

Query: 128 ITNIVIGVCETDYSGYPDCRHDTI---RAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           I  I  G    D                ++         + V +  P++   K   +  A
Sbjct: 323 IPGICFGHHRGDVQENVVSNMMKGLSLLSLNGMSETSTANGVVIWRPMLEFDKSTIFDFA 382

Query: 185 QDIGGQDLVN 194
              G     +
Sbjct: 383 HRYGIPYFKD 392


>gi|291279546|ref|YP_003496381.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Deferribacter desulfuricans SSM1]
 gi|290754248|dbj|BAI80625.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Deferribacter desulfuricans SSM1]
          Length = 346

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 52/187 (27%), Gaps = 12/187 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIVEL 63
                ++  SGG DSS      L     V  ++   FD  +  +  +     V K +   
Sbjct: 1   MKDKIIVAMSGGVDSSVAAYKMLKEGFDVVGVTLKLFD-SENTEKMIADAESVAKLLG-- 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
               K  + +       ++    +S             N    FV   N +    A  +A
Sbjct: 58  ---IKWCVADYSSYFKDVISYFINSYRKGETPNPCAYCNKTAKFVYLFNEMQKNNAKYIA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
                  I                    ++   A+    +  +          K ET ++
Sbjct: 115 TGHYAKII---EKNGKKYIGKATNLQKDQSYYLALLDSFQISLLKFPLSEIDSKDETRQI 171

Query: 184 AQDIGGQ 190
           A++IG  
Sbjct: 172 AKEIGLP 178


>gi|254291552|ref|ZP_04962342.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae AM-19226]
 gi|150422504|gb|EDN14461.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae AM-19226]
          Length = 372

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 50/190 (26%), Gaps = 11/190 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +  +VE L     + +  E  C     + + +   
Sbjct: 9   NSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYC--TAAEDLADAQA 66

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    H +      +   +     +A            +  + I F  F       
Sbjct: 67  VCDKLGIPLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEFADEV 124

Query: 126 LGITNIVIGVCETDYSGYPDCRHDT-------IRAIETAINLGMESHVTVHTPLMWLKKY 178
           L    I +G            +                   L  E       P+  L+K 
Sbjct: 125 LDADYIAMGHYVRRTFPQNGEKPQMLRGLDGNKDQSYFLYTLSHEQVARSLFPVGELEKP 184

Query: 179 ETWKLAQDIG 188
           E  ++A++ G
Sbjct: 185 EVRRIAEEQG 194


>gi|153214224|ref|ZP_01949259.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae 1587]
 gi|153802718|ref|ZP_01957304.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae MZO-3]
 gi|153828671|ref|ZP_01981338.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae 623-39]
 gi|254225518|ref|ZP_04919128.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae V51]
 gi|297578730|ref|ZP_06940658.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae RC385]
 gi|124115473|gb|EAY34293.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae 1587]
 gi|124121758|gb|EAY40501.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae MZO-3]
 gi|125621988|gb|EAZ50312.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae V51]
 gi|148875824|gb|EDL73959.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae 623-39]
 gi|297536324|gb|EFH75157.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae RC385]
          Length = 372

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 50/190 (26%), Gaps = 11/190 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +  +VE L     + +  E  C     + + +   
Sbjct: 9   NSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYC--TAAEDLADAQA 66

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    H +      +   +     +A            +  + I F  F       
Sbjct: 67  VCDKLGIPLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEFADEV 124

Query: 126 LGITNIVIGVCETDYSGYPDCRHDT-------IRAIETAINLGMESHVTVHTPLMWLKKY 178
           L    I +G            +                   L  E       P+  L+K 
Sbjct: 125 LDADYIAMGHYVRRTFPQNGEKPQMLRGLDGNKDQSYFLYTLSHEQVARSLFPVGELEKP 184

Query: 179 ETWKLAQDIG 188
           E  ++A++ G
Sbjct: 185 EVRRIAEEQG 194


>gi|30248966|ref|NP_841036.1| trmU; tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
           protein [Nitrosomonas europaea ATCC 19718]
 gi|81584700|sp|Q82VV0|MNMA_NITEU RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|30138583|emb|CAD84874.1| trmU; tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
           protein [Nitrosomonas europaea ATCC 19718]
          Length = 362

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 51/188 (27%), Gaps = 11/188 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K+   ++  SGG DSS        +   V  L     + +  +  C         + +
Sbjct: 1   MNKS-RVVVGMSGGVDSSVAALLLKQQGYDVTGLFMKNWEEDDTDEYCSSRQ-----DFL 54

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                +   D  L +          +      + Q    PN  V   + I        A 
Sbjct: 55  DAASVADILDIPLEVVNFSTEYRERVFNLFLKEYQAGRTPNPDVLCNSEIKFRAFLDHAL 114

Query: 125 RLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            LG   I  G     +      +                 L  +       P+  L K E
Sbjct: 115 NLGADWIATGHYAQVHETDGLFQLLKGEDGNKDQSYFLYRLNQQQLSHTIFPIGHLYKRE 174

Query: 180 TWKLAQDI 187
             K+A++ 
Sbjct: 175 VRKIAREH 182


>gi|304372837|ref|YP_003856046.1| tRNA-specific 2-thiouridylase mnmA [Mycoplasma hyorhinis HUB-1]
 gi|304309028|gb|ADM21508.1| tRNA-specific 2-thiouridylase mnmA [Mycoplasma hyorhinis HUB-1]
          Length = 370

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 49/197 (24%), Gaps = 31/197 (15%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF------------------DYGQRNKVELE 51
             ++  SGG DSS        +   V  +                    D+    + + +
Sbjct: 3   KVVIGMSGGVDSSVAAYLLKQQGYEVIGVFMRNWDSTLNNDIKGNDSYNDFICPQEKDWQ 62

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
               V KK+               I  +  + +         +             +  +
Sbjct: 63  DAQEVCKKLN------------IPIYRVDFIKEYWEEVFEDFIEKYKSGKTPNPDILCNK 110

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHD-TIRAIETAINLGMESHVTVHT 170
           NI F  F            I +G      +G      D T         L          
Sbjct: 111 NIKFKHFLDYALKTFNADFIAMGHYAKTENGKLFKAKDLTKDQSYFLAQLNNYQLSKTIF 170

Query: 171 PLMWLKKYETWKLAQDI 187
           PL  + K E  K+A ++
Sbjct: 171 PLANITKTEVRKIATEL 187


>gi|254437717|ref|ZP_05051211.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Octadecabacter antarcticus 307]
 gi|198253163|gb|EDY77477.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Octadecabacter antarcticus 307]
          Length = 379

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/149 (12%), Positives = 37/149 (24%), Gaps = 4/149 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +   +    V  ++   Y     +  +   C  + I +     +
Sbjct: 20  RVVVAMSGGVDSSVVAAQLAEEGYDVVGVTLQLYDHGAALAKKGACCAGRDIHDARRVAE 79

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D     ++L           ++    A        P   +     +        A  L  
Sbjct: 80  DMGFPHYVLDYEN---TFREAVIDEFADSYLAGATPVPCIRCNERVKFKDLLETAKDLDA 136

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETA 157
             +  G       G    +          
Sbjct: 137 DCMATGHYIQRKMGPRGAQLHCAEDANRD 165


>gi|229505277|ref|ZP_04394787.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae BX 330286]
 gi|229511053|ref|ZP_04400532.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae B33]
 gi|229518173|ref|ZP_04407617.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae RC9]
 gi|229608296|ref|YP_002878944.1| tRNA-specific 2-thiouridylase MnmA [Vibrio cholerae MJ-1236]
 gi|254848257|ref|ZP_05237607.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae MO10]
 gi|255745540|ref|ZP_05419488.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholera CIRS 101]
 gi|262158386|ref|ZP_06029502.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae INDRE 91/1]
 gi|262170249|ref|ZP_06037936.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae RC27]
 gi|229344888|gb|EEO09862.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae RC9]
 gi|229351018|gb|EEO15959.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae B33]
 gi|229357500|gb|EEO22417.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae BX 330286]
 gi|229370951|gb|ACQ61374.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae MJ-1236]
 gi|254843962|gb|EET22376.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae MO10]
 gi|255736615|gb|EET92012.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholera CIRS 101]
 gi|262021264|gb|EEY39978.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae RC27]
 gi|262029827|gb|EEY48475.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae INDRE 91/1]
          Length = 371

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 50/190 (26%), Gaps = 11/190 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +  +VE L     + +  E  C     + + +   
Sbjct: 8   NSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYC--TAAEDLADAQA 65

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    H +      +   +     +A            +  + I F  F       
Sbjct: 66  VCDKLGIPLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEFADEV 123

Query: 126 LGITNIVIGVCETDYSGYPDCRHDT-------IRAIETAINLGMESHVTVHTPLMWLKKY 178
           L    I +G            +                   L  E       P+  L+K 
Sbjct: 124 LDADYIAMGHYVRRTFPQNGEKPQMLRGLDGNKDQSYFLYTLSHEQVARTLFPVGELEKP 183

Query: 179 ETWKLAQDIG 188
           E  ++A++ G
Sbjct: 184 EVRRIAEEQG 193


>gi|295402096|ref|ZP_06812056.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Geobacillus thermoglucosidasius C56-YS93]
 gi|294975878|gb|EFG51496.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Geobacillus thermoglucosidasius C56-YS93]
          Length = 370

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 46/186 (24%), Gaps = 10/186 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K    ++  SGG DSS            V  +          +  C     +   ++   
Sbjct: 2   KKKRVVVGMSGGVDSSVAAYLLKQEGYDVIGVFMKNWDDTNDDGVC--TATEDYEDVKRV 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   + +            +      +++    PN  V     I        A  L
Sbjct: 60  ANQLGIPYYSVN---FEKEYWDRVFTYFMDELKRGRTPNPDVLCNTEIKFKAFVDYALSL 116

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAI-----NLGMESHVTVHTPLMWLKKYETW 181
               I  G                 + +          L  +    V  PL  L K E  
Sbjct: 117 DADYIATGHYARIRRENGQVTLLRGKDLNKDQTYFLSQLTEKHLAKVLFPLGELTKDEVR 176

Query: 182 KLAQDI 187
           K+A+++
Sbjct: 177 KIAKEL 182


>gi|312109803|ref|YP_003988119.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Geobacillus sp. Y4.1MC1]
 gi|311214904|gb|ADP73508.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Geobacillus sp. Y4.1MC1]
          Length = 370

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 46/186 (24%), Gaps = 10/186 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K    ++  SGG DSS            V  +          +  C     +   ++   
Sbjct: 2   KKKRVVVGMSGGVDSSVAAYLLKQEGYDVIGVFMKNWDDTNDDGVC--TATEDYEDVKRV 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   + +            +      +++    PN  V     I        A  L
Sbjct: 60  ANQLGIPYYSVN---FEKEYWDRVFTYFMDELKRGRTPNPDVLCNTEIKFKAFVDYALSL 116

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAI-----NLGMESHVTVHTPLMWLKKYETW 181
               I  G                 + +          L  +    V  PL  L K E  
Sbjct: 117 DADYIATGHYARIRRENGQVTLLRGKDLNKDQTYFLSQLTEKHLAKVLFPLGELTKDEVR 176

Query: 182 KLAQDI 187
           K+A+++
Sbjct: 177 KIAKEL 182


>gi|156974113|ref|YP_001445020.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio harveyi ATCC BAA-1116]
 gi|166235090|sp|A7MSW1|MNMA_VIBHB RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|156525707|gb|ABU70793.1| hypothetical protein VIBHAR_01824 [Vibrio harveyi ATCC BAA-1116]
          Length = 374

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 53/193 (27%), Gaps = 13/193 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +VE L     + +  E  C     + +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYC--TAAEDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +            H +      +   +     +A            +  + I F  F  
Sbjct: 57  ADAQAVCDKLDIHLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDT-------IRAIETAINLGMESHVTVHTPLM 173
                L    I +G          D +                   L  E       P+ 
Sbjct: 115 FADEVLDADYIAMGHYVRRSFPENDEKPQMLRGLDSNKDQSYFLYTLSNEQIARSLFPVG 174

Query: 174 WLKKYETWKLAQD 186
            L+K E  ++A++
Sbjct: 175 DLEKPEVRRIAEE 187


>gi|308513324|ref|NP_953615.2| tRNA-specific 2-thiouridylase MnmA [Geobacter sulfurreducens PCA]
 gi|81701559|sp|Q74A22|MNMA_GEOSL RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|41152729|gb|AAR35942.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Geobacter sulfurreducens PCA]
 gi|298506604|gb|ADI85327.1| tRNA (5-carboxymethylaminomethyl-2-thio-U34)-thioltransferase
           [Geobacter sulfurreducens KN400]
          Length = 365

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 53/199 (26%), Gaps = 16/199 (8%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVR 57
           M +  K     ++  SGG DSS   +   +    V  +S    DY      E E      
Sbjct: 1   MAE--KHRQRIVIAMSGGVDSSVAAALLKEEGHEVIGISMQVWDYANFAAPEGEKFDTCC 58

Query: 58  --KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
               I +     +      +++      +     +  +   +      PN  V     + 
Sbjct: 59  SLDDIHDARRVAEQIGIPFYVVN---FEEEFRRLVIDDFVDEYFRGRTPNPCVRCNQRVK 115

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRH------DTIRAIETAINLGMESHVTVH 169
                  A  LG   +  G       G     H                 L  +      
Sbjct: 116 FELLLHKARELGADFLATGHYARRVRGEDGLYHLLRGLDPAKDQSYFLFTLTQDQLARTL 175

Query: 170 TPLMWLKKYETWKLAQDIG 188
            PL  + K +  +LA + G
Sbjct: 176 FPLGEMTKEQVRRLAAERG 194


>gi|15641141|ref|NP_230773.1| tRNA-specific 2-thiouridylase MnmA [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121587442|ref|ZP_01677211.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae 2740-80]
 gi|121726243|ref|ZP_01679533.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae V52]
 gi|147673628|ref|YP_001216596.1| tRNA-specific 2-thiouridylase MnmA [Vibrio cholerae O395]
 gi|153816924|ref|ZP_01969591.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae NCTC 8457]
 gi|153822021|ref|ZP_01974688.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae B33]
 gi|227081301|ref|YP_002809852.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae M66-2]
 gi|14195282|sp|Q9KSX8|MNMA_VIBCH RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205828983|sp|A5F2F2|MNMA_VIBC3 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|9655600|gb|AAF94287.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121548362|gb|EAX58426.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae 2740-80]
 gi|121631189|gb|EAX63562.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae V52]
 gi|126512511|gb|EAZ75105.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae NCTC 8457]
 gi|126520486|gb|EAZ77709.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae B33]
 gi|146315511|gb|ABQ20050.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae O395]
 gi|227009189|gb|ACP05401.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae M66-2]
 gi|227012943|gb|ACP09153.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae O395]
          Length = 372

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 50/190 (26%), Gaps = 11/190 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +  +VE L     + +  E  C     + + +   
Sbjct: 9   NSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYC--TAAEDLADAQA 66

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    H +      +   +     +A            +  + I F  F       
Sbjct: 67  VCDKLGIPLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEFADEV 124

Query: 126 LGITNIVIGVCETDYSGYPDCRHDT-------IRAIETAINLGMESHVTVHTPLMWLKKY 178
           L    I +G            +                   L  E       P+  L+K 
Sbjct: 125 LDADYIAMGHYVRRTFPQNGEKPQMLRGLDGNKDQSYFLYTLSHEQVARTLFPVGELEKP 184

Query: 179 ETWKLAQDIG 188
           E  ++A++ G
Sbjct: 185 EVRRIAEEQG 194


>gi|124268750|ref|YP_001022754.1| tRNA-specific 2-thiouridylase MnmA [Methylibium petroleiphilum PM1]
 gi|166234857|sp|A2SLT0|MNMA_METPP RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|124261525|gb|ABM96519.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylibium petroleiphilum PM1]
          Length = 396

 Score = 56.1 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 34/140 (24%), Gaps = 5/140 (3%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  K    ++  SGG DS+        +   V  L     + +  +  C         + 
Sbjct: 1   MSAKKERVVVGLSGGVDSAVSAWLLKQQGHEVVGLFMKNWEDDDDDEYCSSRQ-----DF 55

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +     +      +            +      + +    PN  V     I        A
Sbjct: 56  LDAASVADVIGIEIEHVNFAAEYRDRVFAEFLREYEAGRTPNPDVLCNAEIKFKAFLDHA 115

Query: 124 YRLGITNIVIGVCETDYSGY 143
            RLG   I  G         
Sbjct: 116 LRLGAGKIATGHYARVRRAP 135


>gi|259416977|ref|ZP_05740897.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Silicibacter sp. TrichCH4B]
 gi|259348416|gb|EEW60193.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Silicibacter sp. TrichCH4B]
          Length = 381

 Score = 56.1 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/184 (10%), Positives = 48/184 (26%), Gaps = 6/184 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   ++  ++   V  ++   Y     +  +   C    I +     +
Sbjct: 22  RVVVAMSGGVDSSVVAAYLAEQGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDARRVAE 81

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +     ++L    +   +      +  +                   L+  A        
Sbjct: 82  ERGFPHYVLDYENIFKDAVIDEFADSYLAGATPVPCIRCNERVKFKDLLETAKDLEA-DC 140

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL----KKYETWKLA 184
                 +        P+         + +  L   +   +      L     K  T ++A
Sbjct: 141 MATGHYIQRKMGEHGPELHSAEDANRDQSYFLFSTTPEQLDFLRFPLGHLPSKDATREMA 200

Query: 185 QDIG 188
              G
Sbjct: 201 AQYG 204


>gi|153005212|ref|YP_001379537.1| tRNA-specific 2-thiouridylase MnmA [Anaeromyxobacter sp. Fw109-5]
 gi|205811178|sp|A7HCV7|MNMA_ANADF RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|152028785|gb|ABS26553.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Anaeromyxobacter sp. Fw109-5]
          Length = 349

 Score = 56.1 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 50/186 (26%), Gaps = 7/186 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DSST  +  +     V  +S      +        C    + +     + 
Sbjct: 2   RVLVALSGGVDSSTAAALLVAEGHDVIGVSMRVADYSDARRGRSCCAPDDLEDARAAARR 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                ++  +          + +       +   PN  V   + +   +    A  LG  
Sbjct: 62  LDIPFYVANV---EARFRERVIEPFVRDYVEGRTPNPCVACNSDVKFDWLLARARALGAK 118

Query: 130 NIVIGVCETDYSGYPD----CRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                    +  G                     LG E+   V  P+  L K +   +A 
Sbjct: 119 LATGHYARVERRGGRFALCRAGDPAKDQTYFLYGLGQEALRDVLFPVGDLAKRDVRAVAA 178

Query: 186 DIGGQD 191
             G  +
Sbjct: 179 QAGLPN 184


>gi|302387623|ref|YP_003823445.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium saccharolyticum WM1]
 gi|302198251|gb|ADL05822.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium saccharolyticum WM1]
          Length = 372

 Score = 56.1 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 50/194 (25%), Gaps = 11/194 (5%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
            + + KA   ++  SGG DSS       ++   V  ++    Q      +        + 
Sbjct: 11  RETMSKA-KVVVGMSGGVDSSVAAWLLKEQGYDVIGVTMQIWQDEDTGTQEENGGCCGLS 69

Query: 62  EL--MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
            +    +    LG  + +      +   S +      + Q    PN  +     +     
Sbjct: 70  AVDDARRVAWDLGIPYYVM--NFKEEFKSQVIDYFVGEYQKGRTPNPCIACNRYVKWESL 127

Query: 120 ATLAYRLGITNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
              +  +G   I  G                              NL          P+ 
Sbjct: 128 LKRSLDIGADYIATGHYAQIEKLPNGRYALKKSVTAAKDQTYALYNLTQHQLSHTLMPVG 187

Query: 174 WLKKYETWKLAQDI 187
              K +  ++A  I
Sbjct: 188 AYSKDQIREIADRI 201


>gi|297538087|ref|YP_003673856.1| argininosuccinate synthase [Methylotenera sp. 301]
 gi|297257434|gb|ADI29279.1| argininosuccinate synthase [Methylotenera sp. 301]
          Length = 406

 Score = 56.1 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 48/157 (30%), Gaps = 7/157 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + K    +L +SGG D+S  L W  D +   V T + D GQ  ++E          + E+
Sbjct: 1   MSKVNKVVLAYSGGLDTSVILKWLQDEYQCEVVTFTADLGQGEELEPARAKAKAAGVKEI 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +         + T      +   ++    +  R I         A
Sbjct: 61  ------YIDDVREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIARETNADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         +   Y    +  I A     +L
Sbjct: 115 ISHGATGKGNDQVRFELGAYALNPNIQIIAPWREWDL 151


>gi|296112963|ref|YP_003626901.1| thiamine biosynthesis protein ThiI [Moraxella catarrhalis RH4]
 gi|295920657|gb|ADG61008.1| thiamine biosynthesis protein ThiI [Moraxella catarrhalis RH4]
 gi|326561188|gb|EGE11553.1| thiamine biosynthesis protein ThiI [Moraxella catarrhalis 7169]
 gi|326563003|gb|EGE13278.1| thiamine biosynthesis protein ThiI [Moraxella catarrhalis 46P47B1]
 gi|326567925|gb|EGE18022.1| thiamine biosynthesis protein ThiI [Moraxella catarrhalis BC1]
 gi|326573871|gb|EGE23823.1| thiamine biosynthesis protein ThiI [Moraxella catarrhalis 101P30B1]
          Length = 496

 Score = 56.1 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 60/189 (31%), Gaps = 27/189 (14%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY-GQRNKVELECRLCVRKKIVEL 63
           +      L L SGG DS       + R  RV    F+  GQ +++ ++            
Sbjct: 184 MSTQEDVLSLISGGFDSGVASHMFMRRGSRVHYCFFNLGGQAHELGVKQM---------A 234

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              W        +           +   + V  +I               + +  A+ +A
Sbjct: 235 YHLWSRYSLSHKV--------WFITVDFEPVVAEILKTIDDGHMGVVLKRMMVKAASQIA 286

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            ++ I  +V G      +       + I A  + +         +  PL+   K +  K+
Sbjct: 287 QQIKIQALVTGEAMGQVASQTLTNLNAIDAASSTL---------ILRPLITSDKEDIIKM 337

Query: 184 AQDIGGQDL 192
           A+ IG  ++
Sbjct: 338 AEKIGTANI 346


>gi|157813146|gb|ABV81318.1| putative GMP synthetase [Podura aquatica]
          Length = 220

 Score = 56.1 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +    L+L SGG DS+ C +      R D++  +  D G   K E E       K+   +
Sbjct: 42  QNKQVLMLLSGGVDSTVCAALLKKALREDQIIAVHIDNGFLRKNESENVEKSLVKLGLKI 101

Query: 65  PKWK 68
              K
Sbjct: 102 HVVK 105


>gi|255534090|ref|YP_003094462.1| argininosuccinate synthase [Pedobacter heparinus DSM 2366]
 gi|255347074|gb|ACU06400.1| argininosuccinate synthase [Pedobacter heparinus DSM 2366]
          Length = 397

 Score = 56.1 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 1/64 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               +L FSGG D S  C+  A DR   V ++  + G  +  EL+        +     
Sbjct: 1  MKKKVVLAFSGGLDTSFCCIYLAQDRGLEVHSVIVNTGGFSDEELKEIEKRAYALGVASH 60

Query: 66 KWKD 69
             D
Sbjct: 61 AVVD 64


>gi|239787342|emb|CAX83819.1| tRNA-specific 2-thiouridylase MnmA [uncultured bacterium]
          Length = 366

 Score = 56.1 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 56/186 (30%), Gaps = 5/186 (2%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVEL 63
           I K     +  SGG DSS   +       +V  ++   Y     ++     C  + I + 
Sbjct: 13  IPKGARVAVAMSGGVDSSVVAALMHKEGYQVVGITLQLYDHGEAIQKTKTCCAGQDIYDA 72

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
               +      ++L    +       +  + A        P   V     I        A
Sbjct: 73  RRVSEKIGFHHYVLDYESI---FKEEVIDDFADSYLRGETPIPCVQCNQKIKFRDLLRTA 129

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM-WLKKYETWK 182
             L    +V G    + +G     HD  R     +    +  +      +  + K +T  
Sbjct: 130 RDLDCAALVTGHYVQNINGELHQAHDPSRDQSYFLFSTKQQDLNYLRFPLGGIPKSQTRI 189

Query: 183 LAQDIG 188
           LA++ G
Sbjct: 190 LAEEFG 195


>gi|89092122|ref|ZP_01165077.1| thiamin biosynthesis protein ThiI [Oceanospirillum sp. MED92]
 gi|89083857|gb|EAR63074.1| thiamin biosynthesis protein ThiI [Oceanospirillum sp. MED92]
          Length = 487

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 59/181 (32%), Gaps = 25/181 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           L L SGG DS      ++ R  +   L F+ G  +  E+       K++   + +   S 
Sbjct: 183 LSLISGGFDSIVASYMSMRRGCKTHFLFFNLGG-HAHEIG-----VKQVALYLWQKYGSS 236

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
                + +              V  +I  +   +        + +     ++ R+GI  +
Sbjct: 237 ARVKFITIPF----------DEVVGEILQSVHHSHMGVVLKRMMMRAGEKVSDRMGIDAL 286

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V G      S         I A    +         V  PL+ + K +   + ++IG  D
Sbjct: 287 VTGESIAQVSSQTLPNLAIIDAATEKL---------VVRPLVTMDKQDIIDITREIGAYD 337

Query: 192 L 192
            
Sbjct: 338 F 338


>gi|227832922|ref|YP_002834629.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Corynebacterium aurimucosum ATCC 700975]
 gi|262182589|ref|ZP_06042010.1| tRNA-specific 2-thiouridylase MnmA [Corynebacterium aurimucosum
           ATCC 700975]
 gi|254811450|sp|C3PFT7|MNMA_CORA7 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|227453938|gb|ACP32691.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Corynebacterium aurimucosum ATCC 700975]
          Length = 361

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 49/182 (26%), Gaps = 5/182 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK-KIVELMPKWK 68
             L+  SGG DSS   + A++    V  +     +  +   E        +      +  
Sbjct: 2   RVLVAMSGGVDSSVAAARAVEAGHDVIGVHLALHKDAQQTREKARGCCSLEDSADARRIC 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D LG    +      +    ++  +          PN  +     I           LG 
Sbjct: 62  DKLGIPFYVW--DFSEEFKEAVIGDFVDSYARGETPNPCLRCNEKIKFAALLRKGMALGF 119

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYETWKLAQD 186
             +  G   T  S     R       ++ +   +      H         K +  + A+ 
Sbjct: 120 DAVATGHYATIDSDGYMRRSLDENKDQSYVLGVITKEELDHCFFPIGDTPKPQIREEAKR 179

Query: 187 IG 188
            G
Sbjct: 180 HG 181


>gi|90579124|ref|ZP_01234934.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio angustum S14]
 gi|90439957|gb|EAS65138.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio angustum S14]
          Length = 371

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 55/194 (28%), Gaps = 14/194 (7%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS      L +  +VE L     + +  +  C     + +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLLQQGYQVEGLFMKNWEEDDNDEYCS--AAEDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +            H +      +   +     +A            +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIPLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETD------YSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPL 172
                L    I +G                  R       ++     L  E       P+
Sbjct: 115 FADEVLEADYIAMGHYTRRSFPTAEGEKPQMLRGVDNNKDQSYFLYTLSHEQIARSLFPV 174

Query: 173 MWLKKYETWKLAQD 186
             L+K E  ++A++
Sbjct: 175 GELEKPEVRRIAEE 188


>gi|332284783|ref|YP_004416694.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pusillimonas sp. T7-7]
 gi|330428736|gb|AEC20070.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pusillimonas sp. T7-7]
          Length = 379

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 48/205 (23%), Gaps = 14/205 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M  +       ++  SGG DSS       ++   V  L     + +     C     +  
Sbjct: 9   MTKVSATKGRVVIGMSGGVDSSVAAWLLKEQGYDVLGLFMKNWEDDDDSEYCSTR--QDW 66

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           ++          +   +            +  +   +      PN  V     I      
Sbjct: 67  LDAASVADLIGVD---IEAVNFATEYKDRVFADFLREYSAGRTPNPDVLCNAEIKFKAFL 123

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTI---------RAIETAINLGMESHVTVHTP 171
             A  LG   I  G      S                           L          P
Sbjct: 124 DHAMTLGADYIATGHYARVRSIQTPNGTQHQLLKALDLSKDQSYFLHRLNQAQLARTLFP 183

Query: 172 LMWLKKYETWKLAQDIGGQDLVNLI 196
           L  + K E  +LAQ++   +     
Sbjct: 184 LGEIPKTEVRRLAQELQLPNAAKKD 208


>gi|329909731|ref|ZP_08275115.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327546403|gb|EGF31411.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 369

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 46/197 (23%), Gaps = 13/197 (6%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS   +   ++   V  L     + +     C         + +   
Sbjct: 3   KKKVVIGLSGGVDSSVSAALLKEQGYEVIGLFMKNWEDDDDAEYCSTRQ-----DWIDAV 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +      +            +      + Q    PN  V     I        A  LG
Sbjct: 58  SVADVLGIDIEAVNFSAEYKDRVFAEFLREYQAGRTPNPDVLCNAEIKFKAFLDHAMHLG 117

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK--------KYE 179
              I  G          D     +                ++   +           K E
Sbjct: 118 ADLIATGHYARVRESASDAGRFELLKAIDHTKDQSYFLHRLNQAQLSKTLFPLGEIRKTE 177

Query: 180 TWKLAQDIGGQDLVNLI 196
             K+A+ +G  +     
Sbjct: 178 VRKMAEQLGLPNAAKKD 194


>gi|295695739|ref|YP_003588977.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Bacillus tusciae DSM 2912]
 gi|295411341|gb|ADG05833.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Bacillus tusciae DSM 2912]
          Length = 363

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 52/188 (27%), Gaps = 10/188 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             + ++  SGG DSS   +   +R   V  ++       +       C    + +     
Sbjct: 3   KGTVVVAMSGGVDSSVTAALLKERGYDVIGITMRLRGGEETSSGRGCCSVDDVSDARRVC 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +      + +      +       ++   + +  N             L      A  LG
Sbjct: 63  QSLGIPFYAVNYREAFEKRVIQYFEDEYKRGRTPNPCIACNMYMKYDLL---LEQAVDLG 119

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETA-------INLGMESHVTVHTPLMWLKKYET 180
              +  G            R+   +A +          +L  E       PL   +K E 
Sbjct: 120 ADYLATGHYARVLYDESRGRYVLRKAEDRRKDQTYVLYHLTQEQLARTLFPLGEYEKSEV 179

Query: 181 WKLAQDIG 188
            ++A+  G
Sbjct: 180 REMARKFG 187


>gi|317056376|ref|YP_004104843.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ruminococcus albus 7]
 gi|315448645|gb|ADU22209.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ruminococcus albus 7]
          Length = 360

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 55/188 (29%), Gaps = 11/188 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSST +   LD    V   +   Y   +    E   C    + +     
Sbjct: 4   KKVLAAMSGGVDSSTAVKLLLDAGYEVAGATMHLYNNEDIGIREKSCCSLNDVEDARLVA 63

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                + H+       D   + +  N          PN  +     +        A  LG
Sbjct: 64  LKLGIDFHVFN---FSDEFKTCVMDNFVDTYLAGGTPNPCIECNKHLKFGRFLDRARMLG 120

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-------ESHVTVHTPLMWLKKYET 180
              I  G   T +      R    R+ +++ +          +       P+  + K E 
Sbjct: 121 FDYIATGHYVTSHYDDASGRWLLKRSADSSKDQSYVLYGMTQDQLAHTIFPVGEMSKPEI 180

Query: 181 WKLAQDIG 188
             +A++ G
Sbjct: 181 RAIAEENG 188


>gi|255076007|ref|XP_002501678.1| predicted protein [Micromonas sp. RCC299]
 gi|226516942|gb|ACO62936.1| predicted protein [Micromonas sp. RCC299]
          Length = 780

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 55/205 (26%), Gaps = 34/205 (16%)

Query: 7   KAPSALLL-FSGGQDSSTCLSWALDR-----FDRVETLSFDYGQRNKVELECRLCVRKKI 60
           + P ++ +  SGG DS    +             V  +  DY  R +   E         
Sbjct: 293 ERPRSVAISLSGGVDSMVLATILKAAAPSFGDFDVVAMHIDYANRPESGKEA-------- 344

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            + +  W +  G   ++              + +A   +       +      I      
Sbjct: 345 -DFVRGWCERKGIVCVV--------------RRIAEVKRGVTPREQYEAESRAIRYGLYK 389

Query: 121 TLAYRLGITNIVIGVCETDYS---GYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
             A   G   + +G  E D          R   +  +      G+   V +  P++   K
Sbjct: 390 ECAKTHGFPAVFVGHHEGDVQENIIANIFRGANVLGMNGMNEEGVVEGVRIWRPMLPHSK 449

Query: 178 YETWKLAQDIGGQDLVNLILEESHT 202
                 A   G    ++     + +
Sbjct: 450 DPVLDFAHTFGVPYFLDT--TPTWS 472


>gi|255693956|ref|ZP_05417631.1| GMP synthase domain protein [Bacteroides finegoldii DSM 17565]
 gi|260620230|gb|EEX43101.1| GMP synthase domain protein [Bacteroides finegoldii DSM 17565]
          Length = 435

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 52/183 (28%), Gaps = 20/183 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +  L    D +  +  ++G   + E E        +     + 
Sbjct: 141 KKVLLALSGGVDSSVVAALLLKAIGDNLVCVHVNHGLMRRGESE------DVVEVFSNQL 194

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           K +L          L  ++  +  +     I    +       R +             G
Sbjct: 195 KANLIYVDATD-RFLNKLAGVADPEQKRKIIGGEFIRVFEEEARKLD------------G 241

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           +++      L  +    +  PL  L K E      ++
Sbjct: 242 IDFLGQGTIYPDIVESGTKTAKMVKSHHNVGGLPEDLKFELVEPLRQLFKDEVRACGLEL 301

Query: 188 GGQ 190
           G  
Sbjct: 302 GLP 304


>gi|205822290|sp|Q122U9|MNMA_POLSJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 401

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 47/196 (23%), Gaps = 12/196 (6%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D        ++  SGG DS+        +   V  +     + +     C   +     +
Sbjct: 2   DKQHSKQRIVVGLSGGVDSAVTAYLLKQQGHEVIGIFMKNWEDDDDSEYCSSNI-----D 56

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
            +     +      +            +      + Q    PN  +     I        
Sbjct: 57  FVDAAAVADVIGIEIEHVNFAADYKDRVFAEFLREYQAGRTPNPDILCNAEIKFKAFLDH 116

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWL 175
           A RLG   I  G             H                  L          P+  L
Sbjct: 117 AMRLGAEKIATGHYARVRRNESTGLHELLKGLDPAKDQSYFLHRLNQAQLSKTLFPVGEL 176

Query: 176 KKYETWKLAQDIGGQD 191
            K E  ++A +IG  +
Sbjct: 177 HKTEVRRIADEIGLPN 192


>gi|91790389|ref|YP_551341.1| tRNA-specific 2-thiouridylase MnmA [Polaromonas sp. JS666]
 gi|91699614|gb|ABE46443.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Polaromonas sp. JS666]
          Length = 421

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 47/196 (23%), Gaps = 12/196 (6%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D        ++  SGG DS+        +   V  +     + +     C   +     +
Sbjct: 22  DKQHSKQRIVVGLSGGVDSAVTAYLLKQQGHEVIGIFMKNWEDDDDSEYCSSNI-----D 76

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
            +     +      +            +      + Q    PN  +     I        
Sbjct: 77  FVDAAAVADVIGIEIEHVNFAADYKDRVFAEFLREYQAGRTPNPDILCNAEIKFKAFLDH 136

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWL 175
           A RLG   I  G             H                  L          P+  L
Sbjct: 137 AMRLGAEKIATGHYARVRRNESTGLHELLKGLDPAKDQSYFLHRLNQAQLSKTLFPVGEL 196

Query: 176 KKYETWKLAQDIGGQD 191
            K E  ++A +IG  +
Sbjct: 197 HKTEVRRIADEIGLPN 212


>gi|269967776|ref|ZP_06181823.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio alginolyticus 40B]
 gi|269827596|gb|EEZ81883.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio alginolyticus 40B]
          Length = 430

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 52/193 (26%), Gaps = 13/193 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +VE L     + +  E  C     + +
Sbjct: 57  MSD--NSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYC--TAAEDL 112

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +            H +      +   +     +A            +  + I F  F  
Sbjct: 113 ADAQAVCDKLGIHLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLE 170

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDT-------IRAIETAINLGMESHVTVHTPLM 173
                L    I +G            +                   L  E       P+ 
Sbjct: 171 FADEVLDADYIAMGHYVRRSFPENGEKPQMLRGLDGNKDQSYFLYTLSNEQIARSLFPVG 230

Query: 174 WLKKYETWKLAQD 186
            L+K E  ++A++
Sbjct: 231 DLEKPEVRRIAEE 243


>gi|241956978|ref|XP_002421209.1| tRNA(Ile)-lysidine synthase, putative [Candida dubliniensis CD36]
 gi|223644552|emb|CAX41370.1| tRNA(Ile)-lysidine synthase, putative [Candida dubliniensis CD36]
          Length = 479

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 45/179 (25%), Gaps = 5/179 (2%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
                +  SGG DS             +  ++ D+  R +   E      +     +   
Sbjct: 21  PKKVAVALSGGPDSMLLTWLLSQCQFEIYAITIDHKYRTESSREALAVHERVKNWNLNHI 80

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL- 126
             SL     +    L +    +  K      Q        V            T   RL 
Sbjct: 81  IKSLDYPAGVDPTKLNNFEEVAREKRYEAMAQVCYEKEIPVLFLGHHRDDQLETFIQRLQ 140

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           G ++I         S  P  R  +  +          S V +  P     K +  +  Q
Sbjct: 141 GNSSIFGLAGTHKVSPLPISRDLSPESTL----FNQASQVRILRPFWDYDKQDILETCQ 195


>gi|84516171|ref|ZP_01003531.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Loktanella vestfoldensis SKA53]
 gi|84509867|gb|EAQ06324.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Loktanella vestfoldensis SKA53]
          Length = 379

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/186 (11%), Positives = 45/186 (24%), Gaps = 10/186 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +   +    V  ++   Y     +  +   C  + I +     +
Sbjct: 20  RVVVAMSGGVDSSVVAAKLAEEGYDVVGVTLQLYDHGAALAKKGACCAGRDIHDARRVAE 79

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +     ++L           ++    A        P   +     +        A  L  
Sbjct: 80  EMGFPHYVLDYEN---TFREAVMDEFADSYLGGATPVPCIRCNERVKFKDLLQTARDLDA 136

Query: 129 ------TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
                   I   +       +        ++         +             K ET  
Sbjct: 137 DCMATGHYIQRKMGVQGAELHSAADAAKDQSYFLFSTTQDQLDYLRFPLGHHKSKDETRA 196

Query: 183 LAQDIG 188
           LA   G
Sbjct: 197 LAAKYG 202


>gi|262196730|ref|YP_003267939.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Haliangium ochraceum DSM 14365]
 gi|262080077|gb|ACY16046.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Haliangium ochraceum DSM 14365]
          Length = 391

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 51/192 (26%), Gaps = 10/192 (5%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR--KKIVELMPKWKD 69
           +   SGG DS+   +  +++  RV  ++      +             + I +       
Sbjct: 8   VAALSGGVDSAVTAAMLVEQGHRVVGMTMRLYDASGTSASVGGRCCGPRDIEDARRVCAH 67

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                +++           ++  +          PN  V     I        A  LG  
Sbjct: 68  LGIPFYVVN---FEVDFAHTVIDDFVDTYLAGETPNPCVKCNQHIKFTPLLARARALGAE 124

Query: 130 NIVIGVCET---DYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETWKLA 184
            +  G         +G    R       ++     M      +V  PL  + K E    A
Sbjct: 125 TVATGHYARLEDTGAGIRLRRGRDASKDQSYFLFSMPREELASVRFPLGAMTKDEVRDKA 184

Query: 185 QDIGGQDLVNLI 196
           +  G  +     
Sbjct: 185 RAYGLPNAAKAD 196


>gi|325479846|gb|EGC82931.1| argininosuccinate synthase [Anaerococcus prevotii
          ACS-065-V-Col13]
          Length = 410

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 5/92 (5%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          ++K+A   +L +SGG D+S    W  +     V  +S D GQ    +        K +  
Sbjct: 8  MLKEANKVILAYSGGLDTSVLSYWLKENGASEVICVSVDLGQVENPDKLKE----KALAA 63

Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNV 94
             K+ +   ED  +       +   +  +N+
Sbjct: 64 GASKFYNVNVEDEFIDNYAYKSLLAGAKYENI 95


>gi|291531960|emb|CBK97545.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Eubacterium siraeum 70/3]
          Length = 358

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 35/134 (26%), Gaps = 5/134 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY--GQRNKVELECRLCVRKKIVELM 64
               A++  SGG DSS        R      ++      +   +  E   C    + ++ 
Sbjct: 1   MNNKAVIAMSGGVDSSVAAYLMKQRGFDCIGVTMKLFANEDIGISREHSCCSLDDVDDVR 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     ++       D   + +        ++   PN  +     +        A 
Sbjct: 61  SVAYSLDMPYYVFN---FSDRFETDVIDRFIHAYENGITPNPCIDCNRYLKFDKLYMRAK 117

Query: 125 RLGITNIVIGVCET 138
            L    +V G    
Sbjct: 118 ELDRDYVVTGHYAR 131


>gi|149203838|ref|ZP_01880807.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Roseovarius sp. TM1035]
 gi|149142955|gb|EDM30997.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Roseovarius sp. TM1035]
          Length = 383

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 48/186 (25%), Gaps = 6/186 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +        V  ++   Y     +  +   C    I +     +
Sbjct: 22  RVVVAMSGGVDSSVVAAHLAAEGYDVVGVTLQLYDHGAALAKKGACCAGVDIHDARRVAE 81

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +     ++L    +   +      +  +                   L+  A        
Sbjct: 82  EMGFPHYVLDYENIFRDAVIDEFADSYLAGATPVPCIRCNERVKFKDLLETARDLEA-DC 140

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL----KKYETWKLA 184
                 +        P+    T  A + +  L   +   +      L     K  T +LA
Sbjct: 141 MATGHYIQRKMGVQGPELHSATDSARDQSYFLFSTTPEQLEFLRFPLGHLPSKQATRELA 200

Query: 185 QDIGGQ 190
              G Q
Sbjct: 201 AQYGLQ 206


>gi|17230338|ref|NP_486886.1| GMP synthase [Nostoc sp. PCC 7120]
 gi|44887971|sp|Q8YT80|GUAA_ANASP RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|17131940|dbj|BAB74545.1| GMP synthase (glutamine-hydrolyzing) [Nostoc sp. PCC 7120]
          Length = 540

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 54/186 (29%), Gaps = 11/186 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST          D++  +  D G   K E E    + K   E     
Sbjct: 237 KRVLLALSGGVDSSTLAFLMHKAIGDQLTCVFIDQGFMRKYEPE---RLVKLFQEQFHIP 293

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            + +             +   S   +   K +        V       L     LA    
Sbjct: 294 VEYVNARDRF-------LDIMSGVTDPEEKRRRIGHEFIQVFEETSKNLGPFDYLAQGTL 346

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +++            +     I++      L  +    +  PL  L K E  K+ + +
Sbjct: 347 YPDVIESADTNVDPQTGERVAVKIKSHHNVGGLPKDLRFKLVEPLRKLFKDEVRKVGRSV 406

Query: 188 GGQDLV 193
           G  + +
Sbjct: 407 GLPEEI 412


>gi|218262621|ref|ZP_03477009.1| hypothetical protein PRABACTJOHN_02688 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223270|gb|EEC95920.1| hypothetical protein PRABACTJOHN_02688 [Parabacteroides johnsonii
           DSM 18315]
          Length = 435

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 54/182 (29%), Gaps = 20/182 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +  L    D++  +  ++G   K E E  + V K   +L     
Sbjct: 142 KVLLALSGGVDSSVVAALLLKAIGDKLVCVHVNHGLMRKGESEDVVEVFK--NQLNANLI 199

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                D  L       ++  +  +     I    +       R +             GI
Sbjct: 200 YKDVTDRFLD-----KLAGVADPEEKRKIIGGEFIRVFEEEARKLD------------GI 242

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G    D           +++      L  +    +  PL  L K E      ++G
Sbjct: 243 DFLAQGTIYPDIVESGTKTAKMVKSHHNVGGLPEDLKFELVEPLRQLFKDEVRACGLELG 302

Query: 189 GQ 190
             
Sbjct: 303 LP 304


>gi|170591100|ref|XP_001900309.1| GMP synthase [Brugia malayi]
 gi|158592459|gb|EDP31059.1| GMP synthase, putative [Brugia malayi]
          Length = 786

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 59/189 (31%), Gaps = 7/189 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              L++ SGG DS+ C +        DRV  +  D G     E +  + +  ++   + K
Sbjct: 328 KKVLVMVSGGVDSTVCAALLHKALGSDRVIAIHIDNGFMRSNESDQVVDLLNELNLKVRK 387

Query: 67  WKDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
           +          I     L      ++   +  KI  +          + + L     LA 
Sbjct: 388 YSAFYAFMNGRIQIGNELSTPLMGTIQPELKRKIIGDTFMRVKDKIMDELKLDKDIFLAQ 447

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                +++        S     +     +   A+   +     V  PL    K E  +L 
Sbjct: 448 GTLRPDLIESASHLASSHADVIKTHHNDS---ALVRELRDLGKVLEPLKDFHKDEVRELG 504

Query: 185 QDIGGQDLV 193
             +G  + V
Sbjct: 505 ISLGLPEHV 513


>gi|153826012|ref|ZP_01978679.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae MZO-2]
 gi|149740232|gb|EDM54379.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio cholerae MZO-2]
          Length = 372

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 50/190 (26%), Gaps = 11/190 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +  +VE L     + +  E  C     + + +   
Sbjct: 9   NSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYC--TAAEDLADAQA 66

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    H +      +   +     +A            +  + I F  F       
Sbjct: 67  VCDKIGIPLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEFADEV 124

Query: 126 LGITNIVIGVCETDYSGYPDCRHDT-------IRAIETAINLGMESHVTVHTPLMWLKKY 178
           L    I +G            +                   L  E       P+  L+K 
Sbjct: 125 LDADYIAMGHYVRRTFPQNGEKPQMLRGLDGNKDQSYFLYTLSHEQVARSLFPVGELEKP 184

Query: 179 ETWKLAQDIG 188
           E  ++A++ G
Sbjct: 185 EVRRIAEEQG 194


>gi|167644970|ref|YP_001682633.1| tRNA-specific 2-thiouridylase MnmA [Caulobacter sp. K31]
 gi|205811623|sp|B0SWD8|MNMA_CAUSK RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|167347400|gb|ABZ70135.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Caulobacter sp. K31]
          Length = 409

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 51/187 (27%), Gaps = 11/187 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +        V  ++   Y     +  +   C  + I++     +
Sbjct: 39  RIVAAMSGGVDSTVTAALLAKAGYDVVGVTLQLYDHGAAITKKGACCAGQDILDARMAAE 98

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L            + +  A        P   V     +       +A  LG 
Sbjct: 99  RIGIPHYVLD---YESRFKEQVIEEFADAYLRGETPIPCVRCNQTVKFRDLLDVARDLGA 155

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-------TVHTPLMWLKKYETW 181
             +  G            R    RA + A +               +  PL  + K    
Sbjct: 156 EAMATGHYVQRSFAAGANRPQLRRAADPAKDQSYFLFATTAEQLDFLRFPLGGMDKPTVR 215

Query: 182 KLAQDIG 188
            +A ++G
Sbjct: 216 LVAAELG 222


>gi|239624724|ref|ZP_04667755.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239521110|gb|EEQ60976.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 432

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 57/182 (31%), Gaps = 20/182 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +  +     ++  +  ++G   K E E  + V K  ++    + 
Sbjct: 139 KVLLALSGGVDSSVVAALLIKAIGRQLTCVHVNHGLMRKGESESVIEVFKNQMDANLVYV 198

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D++          LG +   +  +     I    +       R +             GI
Sbjct: 199 DAV-------ERFLGKLEGVADPEQKRKIIGAEFIRVFEEEARKL------------EGI 239

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G    D           +++      L  +   T+  PL  L K E      ++G
Sbjct: 240 DFLAQGTIYPDIVESGTKTAKVVKSHHNVGGLPEDLDFTLVEPLRQLFKDEVRACGLELG 299

Query: 189 GQ 190
             
Sbjct: 300 LP 301


>gi|149185324|ref|ZP_01863641.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Erythrobacter sp. SD-21]
 gi|148831435|gb|EDL49869.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Erythrobacter sp. SD-21]
          Length = 383

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 46/184 (25%), Gaps = 7/184 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIVELMPK 66
             ++  SGG DSS   + A      V  ++   +DYG       +   C    I +    
Sbjct: 26  RIVVAMSGGVDSSVVAALAAKSGAEVIGITLQLYDYG--AATGRKGACCAGDDIADARAV 83

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL--AY 124
                   ++                +  +  +          G     L   A    A 
Sbjct: 84  ADRLGIAHYVSDHESAFREEVVETFADEYLAGRTPVPCIRCNMGPKFTDLFAMARELGAD 143

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            L   + V  +                           +    +  PL  L K +  +LA
Sbjct: 144 CLATGHYVQRLMGPAGPELHRANDPARDQSYFLYATTEDQLNFLRFPLGGLPKAQVRELA 203

Query: 185 QDIG 188
           +  G
Sbjct: 204 EAAG 207


>gi|75907277|ref|YP_321573.1| GMP synthase [Anabaena variabilis ATCC 29413]
 gi|91206794|sp|Q3MEA8|GUAA_ANAVT RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|75701002|gb|ABA20678.1| GMP synthase (glutamine-hydrolyzing) [Anabaena variabilis ATCC
           29413]
          Length = 540

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 55/186 (29%), Gaps = 11/186 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST          D++  +  D G   K E E    + K   E     
Sbjct: 237 KRVLLALSGGVDSSTLAFLMHKAIGDQLTCVFIDQGFMRKYEPE---RLVKLFQEQFHIP 293

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            + +         ++G         +   K +        V       L     LA    
Sbjct: 294 VEYVNARDRFLDIMVG-------VTDPEEKRRRIGHEFIQVFEETSRNLGPFDYLAQGTL 346

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +++            +     I++      L  +    +  PL  L K E  K+ + +
Sbjct: 347 YPDVIESADTNVDPQTGERVAVKIKSHHNVGGLPKDLRFKLVEPLRKLFKDEVRKVGRSV 406

Query: 188 GGQDLV 193
           G  + +
Sbjct: 407 GLPEEI 412


>gi|86147101|ref|ZP_01065418.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio sp. MED222]
 gi|218710012|ref|YP_002417633.1| tRNA-specific 2-thiouridylase MnmA [Vibrio splendidus LGP32]
 gi|85835166|gb|EAQ53307.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio sp. MED222]
 gi|218323031|emb|CAV19208.1| Probable tRNA(5-methylaminomethyl-2-thiouridylate)-
           methyltransferase [Vibrio splendidus LGP32]
          Length = 378

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 38/142 (26%), Gaps = 6/142 (4%)

Query: 1   MNDIIK--KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           M+DI         ++  SGG DSS        +  +VE L     + +  E  C     +
Sbjct: 1   MSDISSGNSEKKVIVGMSGGVDSSVSAYLLQQQGYQVEGLFMKNWEEDDNEEYC--TAAE 58

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
            + +            H +      +   +     +             +  + I F  F
Sbjct: 59  DLADAQAVCDKLGIHLHTIN--FAAEYWDNVFEYFLEEYKAGRTPNPDILCNKEIKFKAF 116

Query: 119 AATLAYRLGITNIVIGVCETDY 140
                  L    I +G      
Sbjct: 117 LEFADEVLDADYIAMGHYVRRT 138


>gi|84391736|ref|ZP_00991638.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio splendidus 12B01]
 gi|84376449|gb|EAP93328.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio splendidus 12B01]
          Length = 378

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 38/142 (26%), Gaps = 6/142 (4%)

Query: 1   MNDIIK--KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           M+DI         ++  SGG DSS        +  +VE L     + +  E  C     +
Sbjct: 1   MSDISSGNSEKKVIVGMSGGVDSSVSAYLLQQQGYQVEGLFMKNWEEDDNEEYC--TAAE 58

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
            + +            H +      +   +     +             +  + I F  F
Sbjct: 59  DLADAQAVCDKLGIHLHTIN--FAAEYWDNVFEYFLEEYKAGRTPNPDILCNKEIKFKAF 116

Query: 119 AATLAYRLGITNIVIGVCETDY 140
                  L    I +G      
Sbjct: 117 LEFADEVLDADYIAMGHYVRRT 138


>gi|332652518|ref|ZP_08418263.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ruminococcaceae bacterium D16]
 gi|332517664|gb|EGJ47267.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ruminococcaceae bacterium D16]
          Length = 361

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 56/223 (25%), Gaps = 15/223 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV--RKKIVELM 64
             P A    SGG DSST +             +      + +  + R      + + +  
Sbjct: 1   MNPIA-AAMSGGVDSSTAVWLLQQAGYDPVGFTMSLFSPDALPPDQRSQCHTARDVADAQ 59

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +      H L    L +     +        +    PN  V     I        A 
Sbjct: 60  AVAQRLGISHHTLD---LSESFCREVMDPFVQAYEQGQTPNPCVLCNRAIKFGALLQAAQ 116

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIE-------TAINLGMESHVTVHTPLMWLKK 177
            +G   +  G            R    +A+            L  +       PL  L K
Sbjct: 117 EMGCPLLATGHYAQVEQDSGSGRWLLKKALHPDKDQSYVLWTLTQQQLAATRFPLGQLSK 176

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNS 220
            E   +A + G         ++   C++   D      +    
Sbjct: 177 EEIRAIALEQGLVSARKSDSQDI--CFVPDGDYASFICHHTGK 217


>gi|256390704|ref|YP_003112268.1| GMP synthase [Catenulispora acidiphila DSM 44928]
 gi|256356930|gb|ACU70427.1| GMP synthase, large subunit [Catenulispora acidiphila DSM 44928]
          Length = 523

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 56/187 (29%), Gaps = 11/187 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              A+   SGG DS+   +       +++  +  D+G   K E      V K  V     
Sbjct: 218 TKRAICGLSGGVDSAVAAAIVQKAVGEQLTCVFVDHGLLRKGE---AEQVEKDFVAATGV 274

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +  +       L  ++  S  +     I    +       R I+     A    R 
Sbjct: 275 QLKVVDAEQR----FLSALAGVSDPEEKRKIIGREFIRVFEQAEREIVEQSADAGEPVR- 329

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +               I++      L  +    +  PL  L K E  ++ ++
Sbjct: 330 --FLVQGTLYPDVVESGGGTGAANIKSHHNVGGLPDDLQFELIEPLRKLFKDEVRQVGRE 387

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 388 LGLPEAI 394


>gi|121596352|ref|YP_988248.1| tRNA-specific 2-thiouridylase MnmA [Acidovorax sp. JS42]
 gi|205811052|sp|A1WD47|MNMA_ACISJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|120608432|gb|ABM44172.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acidovorax sp. JS42]
          Length = 379

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 48/194 (24%), Gaps = 13/194 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +KK    ++  SGG DS+        +   V  +     + +     C         + +
Sbjct: 1   MKKH-RVVVGLSGGVDSAVTAHLLKQQGHEVVGIFMKNWEDDDDSEFCSSRQ-----DFL 54

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                +      +            +      + Q    PN  V     I        A 
Sbjct: 55  DAASVADVIGIEIEHVNFAAEYKDRVFAEFLREYQAGRTPNPDVLCNAEIKFKAFLDHAM 114

Query: 125 RLGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWLKK 177
           RLG   I  G                      +         L          P+  L K
Sbjct: 115 RLGAEKIATGHYARVRQNPATGLFELLKGLDPSKDQSYFLHRLNQAQLSKTLFPVGELHK 174

Query: 178 YETWKLAQDIGGQD 191
            E  ++A DIG  +
Sbjct: 175 TEVRRIAADIGLPN 188


>gi|51473501|ref|YP_067258.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rickettsia typhi str. Wilmington]
 gi|73920129|sp|Q68X66|MNMA_RICTY RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|51459813|gb|AAU03776.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rickettsia typhi str. Wilmington]
          Length = 358

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 55/185 (29%), Gaps = 13/185 (7%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIVELMPKWK 68
           ++  SGG DSS   +   ++   V  ++   +DYG    V  +   C  K I +      
Sbjct: 5   VVAMSGGVDSSAVAAMLHEQGHHVIGITLQLYDYGI--AVGKKNACCAGKDIYDAKMVAN 62

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           S+  N          P   V    ++        A  LG 
Sbjct: 63  KLGIPHYVLDYEN---KFKESVIDNFVNSYLHGETPLPCVQCNKLVKFRDLINTAKELGA 119

Query: 129 TNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +     V  +   + +                  +  E    +  PL    KYET KL
Sbjct: 120 DKLATGHYVRKINGYNGAELHTGLDAAKDQSYFLFTITREQLEYLIFPLGGFTKYETRKL 179

Query: 184 AQDIG 188
           A   G
Sbjct: 180 ASKFG 184


>gi|209694506|ref|YP_002262434.1| thiamine biosynthesis protein ThiI [Aliivibrio salmonicida LFI1238]
 gi|226726948|sp|B6EIB2|THII_ALISL RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|208008457|emb|CAQ78623.1| thiamine biosynthesis protein ThiI [Aliivibrio salmonicida LFI1238]
          Length = 482

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 60/183 (32%), Gaps = 27/183 (14%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV-RKKIVELMPKWKD 69
            L L SGG DS       + R  +V  + F+ G            +  K++   + K   
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYMFFNLGGP-------AHEIGVKQVSHFLWKKYG 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           S  +   + +            + V  +I +             +F+     +A +LGI 
Sbjct: 233 SSAKVKFIAVDF----------EPVVAEILEKVDDGQMGVILKRMFMRAGGMVAEKLGIQ 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      S         I  +   +         +  PL+   K +   +A+DIG 
Sbjct: 283 GMVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIINVARDIGT 333

Query: 190 QDL 192
           +D 
Sbjct: 334 EDF 336


>gi|148262311|ref|YP_001229017.1| argininosuccinate synthase [Geobacter uraniireducens Rf4]
 gi|187470630|sp|A5GDA4|ASSY_GEOUR RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|146395811|gb|ABQ24444.1| argininosuccinate synthase [Geobacter uraniireducens Rf4]
          Length = 406

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 59/201 (29%), Gaps = 11/201 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K+    +L +SGG D+S  L W  +     V T S D GQ +++                
Sbjct: 4   KEVKKIVLAYSGGLDTSIILKWLKNEYGCEVITFSADLGQGDELTPIRDKAFA---TGAD 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             + D L E+ +            +        +   ++    +  R +         A 
Sbjct: 61  KVYIDDLREEFVRDFVF---PMFRANAIYEGHYLLGTSIARPLIAKRQMEIAKIEGADAV 117

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP----LMWLKKYET 180
             G T         +   Y      T+ A      L     +  +       + + K   
Sbjct: 118 SHGATGKGNDQVRFELGYYHFNPAITVIAPWRDWKLNSRQALINYAKKNDIPIPVTKKRP 177

Query: 181 WKLAQDIGGQDLVNLILEESH 201
           W   +++        ILE++ 
Sbjct: 178 WSSDRNLLHISFEGAILEDTW 198


>gi|332799658|ref|YP_004461157.1| GMP synthase [Tepidanaerobacter sp. Re1]
 gi|332697393|gb|AEE91850.1| GMP synthase (glutamine-hydrolyzing) [Tepidanaerobacter sp. Re1]
          Length = 511

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 59/187 (31%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             A+   SGG DSS           D +  +  D+G   K E      V K   +     
Sbjct: 217 KKAICALSGGVDSSVAALLVHKAIGDNLTCIFVDHGLLRKNE---AENVIKTFKDKFHMN 273

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             ++       L+ L  ++     + +  +                 F+      A +LG
Sbjct: 274 LIAVDASKRF-LSKLKGVTDPEKKRKIIGEE----------------FIRVFEEEAAKLG 316

Query: 128 -ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +  +V G    D     +     +++      L  +    +  PL  L K E  K+  +
Sbjct: 317 KVNFLVQGTVYPDVIESVNPIGGAVKSHHNVGGLPEDLEFELIEPLRELFKDEVRKIGLE 376

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 377 LGLPEEL 383


>gi|296535629|ref|ZP_06897808.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Roseomonas cervicalis ATCC 49957]
 gi|296264053|gb|EFH10499.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Roseomonas cervicalis ATCC 49957]
          Length = 368

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 47/186 (25%), Gaps = 10/186 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS       ++   V   +   Y     +E +   C  + I +      
Sbjct: 2   RIVVAMSGGVDSSVVAGLLKEQGHEVIGATLQLYDHGAAIEKKGACCAGQDIHDARDVAD 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++ ++ A        P   V     +       LA  LG 
Sbjct: 62  RLGIPHYVLDR---ERRFRDAVIEDFAEAYARGETPIPCVRCNQTVKFQDLVELARDLGA 118

Query: 129 TNIVIGVCETDYSG------YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
             +  G       G               ++         +          +  K E   
Sbjct: 119 DALATGHYVRRTEGEAGAELRRAADPARDQSYFLFATTRAQLEFCRFPLGDYTSKAEVRA 178

Query: 183 LAQDIG 188
            A  +G
Sbjct: 179 EALRLG 184


>gi|166364457|ref|YP_001656730.1| GMP synthase [Microcystis aeruginosa NIES-843]
 gi|166086830|dbj|BAG01538.1| GMP synthetase [Microcystis aeruginosa NIES-843]
          Length = 541

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 54/186 (29%), Gaps = 11/186 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST          D++  +  D G   K E E    + +   E     
Sbjct: 238 KRVLLALSGGVDSSTLAFLLHRAIGDQLTCMFIDQGFMRKGEPE---RLMQIFNEQFHIR 294

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            + +             ++  +   +   K +        V       L     LA    
Sbjct: 295 VEYVNARERF-------LAQVAGVTDPEEKRRRIGHEFIQVFEEESNRLGPFDYLAQGTL 347

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +++            +     I++      L       +  PL  L K E  KL + I
Sbjct: 348 YPDVIESADSNVDPKTGERVAVKIKSHHNVGGLPKNLRFKLVEPLRKLFKDEVRKLGRSI 407

Query: 188 GGQDLV 193
           G  + +
Sbjct: 408 GLPEEI 413


>gi|160939548|ref|ZP_02086897.1| hypothetical protein CLOBOL_04441 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437499|gb|EDP15262.1| hypothetical protein CLOBOL_04441 [Clostridium bolteae ATCC
           BAA-613]
          Length = 433

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 60/185 (32%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +  +     ++  +  ++G   K E E  + V K  ++    + 
Sbjct: 140 KVLLALSGGVDSSVVAALLIKAIGKQLTCVHVNHGLMRKGESESVIDVFKNQMDANLVYV 199

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D++          LG ++  +  +     I    +       R +             GI
Sbjct: 200 DAVDR-------FLGKLAGVADPEQKRKIIGAEFIRVFEEEARKL------------EGI 240

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G    D           +++      L  + + T+  PL  L K E      ++G
Sbjct: 241 EFLAQGTIYPDIVESGTKTAKVVKSHHNVGGLPEDLNFTLVEPLRQLFKDEVRACGLELG 300

Query: 189 GQDLV 193
               +
Sbjct: 301 LPHSM 305


>gi|325679422|ref|ZP_08159007.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ruminococcus albus 8]
 gi|324109019|gb|EGC03250.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ruminococcus albus 8]
          Length = 356

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 59/221 (26%), Gaps = 13/221 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS  +   LD+   V   +   Y   +    E   C    + +    
Sbjct: 3   KKRVLAAMSGGVDSSAAVKLLLDKGYEVAGATMHLYNNEDIGIREKNCCSLNDVEDARLV 62

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H+       D     +  +          PN  +     +        A  L
Sbjct: 63  ALKLGIDFHVFN---FSDEFKMRVMDDFVNTYLSGGTPNPCIECNKHLKFGRFLERAELL 119

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-------ESHVTVHTPLMWLKKYE 179
           G   I  G   T +      R    R+ + A +                  P+  + K +
Sbjct: 120 GFDYIATGHYVTSHYDEASGRWLLKRSADRAKDQSYVLYGMTQHQLAHTIFPVGDMNKTD 179

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNS 220
              LA++ G  +      ++   C++   D           
Sbjct: 180 IRALAEENGLINAHKRDSQDI--CFIPDGDYAKFITEAAGE 218


>gi|262306019|gb|ACY45602.1| gln amidotransferase [Ctenolepisma lineata]
          Length = 197

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 2/63 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               LLL SGG DS+ C +      R D+V  +  D G   K E +      +K+   + 
Sbjct: 43  NNKVLLLISGGVDSTVCAALLHKALREDQVIAVHIDNGFMRKNESQRVEQSLEKLGLRIK 102

Query: 66  KWK 68
             K
Sbjct: 103 VVK 105


>gi|220906770|ref|YP_002482081.1| tRNA-specific 2-thiouridylase MnmA [Cyanothece sp. PCC 7425]
 gi|219863381|gb|ACL43720.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Cyanothece sp. PCC 7425]
          Length = 368

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 48/168 (28%), Gaps = 8/168 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +  S ++  SGG DSS   +    +  RV  L+        +      C  + +V+    
Sbjct: 11  QNKSVVVGLSGGVDSSVAAASLHHQGYRVVGLTL------WLMKGKGQCCSEGLVDAAQL 64

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            ++     HI+    L           VA               R + F          L
Sbjct: 65  CEELGVPHHIVDSRELFQSQIVDYL--VAGYSDGITPLPCSQCNRTVKFGPMLHYAQTEL 122

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
           GI  I  G            R+   RA++ + +     +      L  
Sbjct: 123 GIETIATGHYARITVDPQTGRYQLRRAVDRSKDQSYFLYDLTQAHLAH 170


>gi|239828143|ref|YP_002950767.1| tRNA-specific 2-thiouridylase MnmA [Geobacillus sp. WCH70]
 gi|239808436|gb|ACS25501.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Geobacillus sp. WCH70]
          Length = 370

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 43/186 (23%), Gaps = 10/186 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K    ++  SGG DSS            V  +          +  C     +   ++   
Sbjct: 2   KKKRVVVGMSGGVDSSVAAYLLKQEGYDVIGVFMKNWDDTNDDGVC--TATEDYEDVKRV 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   + +      +      T  +    +        +     I        A  L
Sbjct: 60  ANQLGIPYYSVN--FEKEYWDRVFTYFIDELKRGRTPNPDVLC-NTEIKFKAFVDYALSL 116

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAI-----NLGMESHVTVHTPLMWLKKYETW 181
               I  G                 +            L  E    V  P+  L K E  
Sbjct: 117 DADYIATGHYARISRENGQIALLRGKDPNKDQTYFLSQLTAEHLSKVLFPIGELTKDEVR 176

Query: 182 KLAQDI 187
           K+AQ++
Sbjct: 177 KIAQEL 182


>gi|24214187|ref|NP_711668.1| tRNA-specific 2-thiouridylase MnmA [Leptospira interrogans serovar
           Lai str. 56601]
 gi|59799068|sp|Q8F625|MNMA_LEPIN RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|24195088|gb|AAN48686.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Leptospira interrogans serovar Lai str. 56601]
          Length = 375

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 52/191 (27%), Gaps = 11/191 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETL---SFDYGQRNKVELECRLCVRKKIVELM 64
               ++  SGG DS+      ++    V  +   +++Y        +   C  + I +  
Sbjct: 3   KGKIIVAMSGGVDSAVTAGLLMEDGYEVIGVNLRTWEYEAPACDTTKKSCCSPEDIRDAR 62

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     +++ +  +                Q    PN  V     +        A 
Sbjct: 63  DVGISLKIPFYVIKMEKVFQEKVIDRFIE---DYQHGKTPNPCVECNTFVKFGALFEKAK 119

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDT-----IRAIETAINLGMESHVTVHTPLMWLKKYE 179
            LGI  I  G                              L  E+   V  PL  + K E
Sbjct: 120 ALGIDKIATGHYARIARNGERYAIANGIDVGKNQAYYLYGLSQENLKNVIFPLGEMTKPE 179

Query: 180 TWKLAQDIGGQ 190
             ++A+ +G  
Sbjct: 180 VRQIARRMGLP 190


>gi|73920128|sp|Q72Q44|MNMA_LEPIC RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 375

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 52/191 (27%), Gaps = 11/191 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETL---SFDYGQRNKVELECRLCVRKKIVELM 64
               ++  SGG DS+      ++    V  +   +++Y        +   C  + I +  
Sbjct: 3   KGKIIVAMSGGVDSAVTAGLLMEDGYEVIGVNLRTWEYEAPACDTTKKSCCSPEDIRDAR 62

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     +++ +  +                Q    PN  V     +        A 
Sbjct: 63  DVGISLKIPFYVIKMEKVFQEKVIDRFIE---DYQHGKTPNPCVECNTFVKFGALFEKAK 119

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDT-----IRAIETAINLGMESHVTVHTPLMWLKKYE 179
            LGI  I  G                              L  E+   V  PL  + K E
Sbjct: 120 ALGIDKIATGHYARIARNGERYAIANGIDVGKNQAYYLYGLSQENLKNVIFPLGEMTKPE 179

Query: 180 TWKLAQDIGGQ 190
             ++A+ +G  
Sbjct: 180 VRQIARRMGLP 190


>gi|159902578|ref|YP_001549922.1| GMP synthase [Prochlorococcus marinus str. MIT 9211]
 gi|159887754|gb|ABX07968.1| Glutamine amidotransferase class-I:GMP synthase [Prochlorococcus
           marinus str. MIT 9211]
          Length = 548

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 51/190 (26%), Gaps = 19/190 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST          D++  +  D G   K E E                
Sbjct: 245 KKVLLALSGGVDSSTLAFLLKRAIGDQLTCMFIDQGFMRKGEPEF--------------L 290

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +   +   + +  +                +D          R              L 
Sbjct: 291 MEFFDQKFKINVQYINARERFISKLQGISDPEDKRKVIGREFIRVFEEESERLGPFDYLA 350

Query: 128 ITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              +   V E+  +       +     I++      L  +    +  PL  L K E  K+
Sbjct: 351 QGTLYPDVIESSGTNLDPKTGERIAVKIKSHHNVGGLPKDLQFKLVEPLRMLFKDEVRKV 410

Query: 184 AQDIGGQDLV 193
            + +G  + +
Sbjct: 411 GRALGLPEEI 420


>gi|310829791|ref|YP_003962148.1| GMP synthase [Eubacterium limosum KIST612]
 gi|308741525|gb|ADO39185.1| GMP synthase [Eubacterium limosum KIST612]
          Length = 435

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 56/183 (30%), Gaps = 20/183 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +  +     ++  +  ++G   K E E  + V K  ++    + 
Sbjct: 142 KVLLALSGGVDSSVVAALLIKAIGKQLVCVHVNHGLMRKGESESVVEVFKNQLDANLVYV 201

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D+           L  ++  +  +     I    +       R +             GI
Sbjct: 202 DAT-------ERFLTKLAGVADPEEKRKIIGAEFIRVFEEEARKL------------EGI 242

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G    D           +++      L  +    +  P+  L K E      ++G
Sbjct: 243 DFLGQGTIYPDIVESGTKTAKMVKSHHNVGGLPEDLQFELVEPVRQLFKDEVRACGTELG 302

Query: 189 GQD 191
             D
Sbjct: 303 LPD 305


>gi|302335768|ref|YP_003800975.1| thiamine biosynthesis/tRNA modification protein ThiI [Olsenella uli
           DSM 7084]
 gi|301319608|gb|ADK68095.1| thiamine biosynthesis/tRNA modification protein ThiI [Olsenella uli
           DSM 7084]
          Length = 410

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 51/184 (27%), Gaps = 25/184 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L S G DS         R      + F    R           +  +  L P    
Sbjct: 178 KVVTLLSSGFDSPVATWMVGRRGATCVPVHFS--GRPMTPDTSEYLTQDIVRALAP--SG 233

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G  +++P          ++              +  +     +    A  +A   G  
Sbjct: 234 VVGRLYVVPFGARQREISLAV------------PQSLRIISYRRVMFSVAERIAQLEGAK 281

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      +          + ++    +     + V  PL+   K E  + A+ IG 
Sbjct: 282 AIVTGESLGQVAS---------QTLDNIAAVNEVVSLPVLRPLIGSDKQEIMRRAEQIGT 332

Query: 190 QDLV 193
            D+ 
Sbjct: 333 YDIS 336


>gi|282880951|ref|ZP_06289642.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella timonensis CRIS 5C-B1]
 gi|281305174|gb|EFA97243.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella timonensis CRIS 5C-B1]
          Length = 358

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 50/189 (26%), Gaps = 7/189 (3%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN    K     +L SGG DSS  +   +    + +      G   + E +C     + +
Sbjct: 1   MNIDEIKDKRIAVLLSGGVDSSVVVYELVRMGVQPDCFYIKIGPEEQEEWDCTSE--EDL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                       +  ++      +  +      +             +  R I F  F  
Sbjct: 59  EMATHVAAKYGCKLQVVD--CHKEYWNEVTRYTMEKVKAGYTPNPDVMCNRLIKFGAFHE 116

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH---TPLMWLKK 177
            + Y+  +             G            +    L       +     P+   +K
Sbjct: 117 KMGYQYDLIATGHYAQTEIIEGRKWLTTSPDPVKDQTDFLAQIYDWQLKKALFPIGHYQK 176

Query: 178 YETWKLAQD 186
            E  K+A+ 
Sbjct: 177 GEVRKIAER 185


>gi|298376303|ref|ZP_06986259.1| GMP synthase, C- domain protein [Bacteroides sp. 3_1_19]
 gi|298267340|gb|EFI08997.1| GMP synthase, C- domain protein [Bacteroides sp. 3_1_19]
          Length = 435

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 58/183 (31%), Gaps = 20/183 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +  L    D++  +  ++G   K E E          +++  +
Sbjct: 141 KKVLLALSGGVDSSVVAALLLKAIGDKLVCVHVNHGLMRKGESE----------DVVEVF 190

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           K+ L  + +   A    ++  +  ++   K +        V       L          G
Sbjct: 191 KNQLNANLVYVDATDRFLNKLADVEDPEQKRKIIGGEFIRVFEEEARKL---------DG 241

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           +++      L  +    +  PL  L K E      ++
Sbjct: 242 IDFLAQGTIYPDIVESGTKTAKMVKSHHNVGGLPEDLQFELVEPLRQLFKDEVRACGVEL 301

Query: 188 GGQ 190
           G  
Sbjct: 302 GLP 304


>gi|262383281|ref|ZP_06076417.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262294179|gb|EEY82111.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 435

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 58/183 (31%), Gaps = 20/183 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +  L    D++  +  ++G   K E E          +++  +
Sbjct: 141 KKVLLALSGGVDSSVVAALLLKAIGDKLVCVHVNHGLMRKGESE----------DVVEVF 190

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           K+ L  + +   A    ++  +  ++   K +        V       L          G
Sbjct: 191 KNQLNANLVYVDATDRFLNKLADVEDPEQKRKIIGGEFIRVFEEEARKL---------DG 241

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           +++      L  +    +  PL  L K E      ++
Sbjct: 242 IDFLAQGTIYPDIVESGTKTAKMVKSHHNVGGLPEDLQFELVEPLRQLFKDEVRACGVEL 301

Query: 188 GGQ 190
           G  
Sbjct: 302 GLP 304


>gi|256841570|ref|ZP_05547077.1| GMP synthase domain-containing protein [Parabacteroides sp. D13]
 gi|256737413|gb|EEU50740.1| GMP synthase domain-containing protein [Parabacteroides sp. D13]
          Length = 435

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 58/183 (31%), Gaps = 20/183 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +  L    D++  +  ++G   K E E          +++  +
Sbjct: 141 KKVLLALSGGVDSSVVAALLLKAIGDKLVCVHVNHGLMRKGESE----------DVVEVF 190

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           K+ L  + +   A    ++  +  ++   K +        V       L          G
Sbjct: 191 KNQLNANLVYVDATDRFLNKLADVEDPEQKRKIIGGEFIRVFEEEARKL---------DG 241

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           +++      L  +    +  PL  L K E      ++
Sbjct: 242 IDFLAQGTIYPDIVESGTKTAKMVKSHHNVGGLPEDLQFELVEPLRQLFKDEVRACGVEL 301

Query: 188 GGQ 190
           G  
Sbjct: 302 GLP 304


>gi|171185766|ref|YP_001794685.1| thiamine biosynthesis protein ThiI [Thermoproteus neutrophilus
           V24Sta]
 gi|170934978|gb|ACB40239.1| thiamine biosynthesis/tRNA modification protein ThiI [Thermoproteus
           neutrophilus V24Sta]
          Length = 475

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 53/185 (28%), Gaps = 28/185 (15%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L L SGG DS       + R   V+      G          L +  ++++ +  W  
Sbjct: 173 KVLALVSGGIDSPVAAWMLMRRGAHVDVFYCHLGG------TYALRLVVEVIKRLLSW-- 224

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-LAYRLGI 128
                              S   N  + + D +     +       L   A   A  L  
Sbjct: 225 -------------------SYGYNARVAVADCSPVVRALRRGVREELWNIAFKRALYLAA 265

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
           + +   V              + + ++          + +  PL+ + K E   LA+ IG
Sbjct: 266 SKVAEAVKAAALVTGESLGQVSSQTLQALAAAERGLDMPIFRPLVGMDKDEIVHLAERIG 325

Query: 189 GQDLV 193
             ++ 
Sbjct: 326 TYEVS 330


>gi|150008446|ref|YP_001303189.1| putative GMP synthase [Parabacteroides distasonis ATCC 8503]
 gi|255014181|ref|ZP_05286307.1| putative GMP synthase [Bacteroides sp. 2_1_7]
 gi|301309336|ref|ZP_07215278.1| GMP synthase, C- domain protein [Bacteroides sp. 20_3]
 gi|149936870|gb|ABR43567.1| putative GMP synthase [Parabacteroides distasonis ATCC 8503]
 gi|300832425|gb|EFK63053.1| GMP synthase, C- domain protein [Bacteroides sp. 20_3]
          Length = 435

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 58/183 (31%), Gaps = 20/183 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +  L    D++  +  ++G   K E E          +++  +
Sbjct: 141 KKVLLALSGGVDSSVVAALLLKAIGDKLVCVHVNHGLMRKGESE----------DVVEVF 190

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           K+ L  + +   A    ++  +  ++   K +        V       L          G
Sbjct: 191 KNQLNANLVYVDATDRFLNKLADVEDPEQKRKIIGGEFIRVFEEEARKL---------DG 241

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           +++      L  +    +  PL  L K E      ++
Sbjct: 242 IDFLAQGTIYPDIVESGTKTAKMVKSHHNVGGLPEDLQFELVEPLRQLFKDEVRACGVEL 301

Query: 188 GGQ 190
           G  
Sbjct: 302 GLP 304


>gi|32475293|ref|NP_868287.1| argininosuccinate synthase [Rhodopirellula baltica SH 1]
 gi|32445834|emb|CAD78565.1| argininosuccinate synthase [Rhodopirellula baltica SH 1]
          Length = 444

 Score = 55.7 bits (132), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 45/151 (29%), Gaps = 5/151 (3%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
            +  S +L +SGG D+S  L W  D+   V  +  D GQ      E R  + +K      
Sbjct: 39  SEMKSCVLAYSGGLDTSVILGWLQDQGYEVHCVYVDLGQ----PCEDRDAIMEKARTCGA 94

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           K    L +              +   K   + +   ++    +    +         AY 
Sbjct: 95  K-SSRLVDVREELCRDFAFPVLAWQAKYEQIYLLGTSIARPLISKVCLEVAREVGATAYA 153

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIET 156
            G T      C    +      +  + A   
Sbjct: 154 HGATGKGNDQCRFQLAAEALDPNIEMIAPWR 184


>gi|239616529|ref|YP_002939851.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Kosmotoga olearia TBF 19.5.1]
 gi|239505360|gb|ACR78847.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Kosmotoga olearia TBF 19.5.1]
          Length = 359

 Score = 55.7 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/185 (11%), Positives = 39/185 (21%), Gaps = 7/185 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSF----DYGQRNKVELECRLCVRKKIVELMPKWK 68
           +  SGG DS+   +        V         D       E +   C     ++      
Sbjct: 7   VALSGGVDSAVAAAILKAEGHDVVGYHMKNLPDTLFELVPEKKKVCCSPSDTIDTHKIAA 66

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA---TLAYR 125
               E  I+ L  +                +  N             L+  A    +   
Sbjct: 67  KLGIELRIVKLNDIFRKEIIDYFIREYQAGKTPNPCVRCNDLMKFGALMEKAFGDGMEKF 126

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                  I                          +       +  P   + K E   +A+
Sbjct: 127 ASGHYARIVEHPKYGLSLARGVAKYKDQAYFLSRIKRRKLPYIIFPNGNMTKEEIRDIAR 186

Query: 186 DIGGQ 190
           ++G  
Sbjct: 187 ELGLP 191


>gi|296435803|gb|ADH17977.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia trachomatis G/9768]
 gi|296437663|gb|ADH19824.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia trachomatis G/11074]
 gi|297140162|gb|ADH96920.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia trachomatis G/9301]
          Length = 358

 Score = 55.7 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 54/186 (29%), Gaps = 9/186 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSF-DYGQRNKVELECRLCVRKKIVELM 64
              + ++  SGG DSS        +    V  L   ++G++++          + +  + 
Sbjct: 1   MRKTVIVAMSGGVDSSVVAYLLKKQGEYNVVGLFMKNWGEQDENGECTATKDFRDVERIA 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            +            ++   +      ++ +             +  R I F +    +  
Sbjct: 61  EQLSIPYYT-----VSFSKEYKERVFSRFLREYANGYTPNPDVLCNREIKFDLLQKKVRE 115

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYETWK 182
             G        C     G    R       ++    G        V  PL  + K E  +
Sbjct: 116 LKGDFLATGHYCRGGADGTGLSRGIDPNKDQSYFLCGTPKDALSNVLFPLGGMYKTEVRR 175

Query: 183 LAQDIG 188
           +AQ+ G
Sbjct: 176 IAQEAG 181


>gi|255311088|ref|ZP_05353658.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia trachomatis 6276]
          Length = 358

 Score = 55.7 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 54/186 (29%), Gaps = 9/186 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSF-DYGQRNKVELECRLCVRKKIVELM 64
              + ++  SGG DSS        +    V  L   ++G++++          + +  + 
Sbjct: 1   MRKTVIVAMSGGVDSSVVAYLLKKQGEYNVVGLFMKNWGEQDENGECTATKDFRDVERIA 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            +            ++   +      ++ +             +  R I F +    +  
Sbjct: 61  EQLSIPYYT-----VSFSKEYKERVFSRFLREYANGYTPNPDVLCNREIKFDLLQKKVRE 115

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYETWK 182
             G        C     G    R       ++    G        V  PL  + K E  +
Sbjct: 116 LKGDFLATGHYCRGGADGTGLSRGIDPNKDQSYFLCGTPKDALSNVLFPLGGMYKTEVRR 175

Query: 183 LAQDIG 188
           +AQ+ G
Sbjct: 176 IAQEAG 181


>gi|313113898|ref|ZP_07799457.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310623777|gb|EFQ07173.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 367

 Score = 55.7 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 47/189 (24%), Gaps = 12/189 (6%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR--KKIVELMP 65
            P AL+  SGG DSS               ++    +   +           K I +   
Sbjct: 9   KPRALIAMSGGVDSSVAAWLMQQAGYDCTGITMRLTRNETLGQSGFHTCCSEKDIEDAAE 68

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                     +L            + +      +    PN  +     +        A  
Sbjct: 69  VAYAMDIPYEVLD---FTADFREQIIEKFVRVYEAGGTPNPCIDCNKYMKFRHLLDWARA 125

Query: 126 LGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            G+  +V G            R        +         NL  E    +  PL  L K 
Sbjct: 126 HGMEYVVTGHYARVEQDEATGRFLLKKGLDEGKDQSYVLYNLTQEQLAHIRLPLGGLHKT 185

Query: 179 ETWKLAQDI 187
           E  ++A+  
Sbjct: 186 EVREIAEQH 194


>gi|284006406|emb|CBA71642.1| thiamine biosynthesis protein [Arsenophonus nasoniae]
          Length = 465

 Score = 55.7 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 53/182 (29%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++       
Sbjct: 163 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------TSHEI--GVKQVAYHLWHR 213

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +      S         Q              + +  A+T+A R G+  
Sbjct: 214 FGRSHKVRFVAIDFAPIVSEILTKIDDGQ-------MGVVLKRMIIRAASTIAERYGVQA 266

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K     +A++IG  
Sbjct: 267 LVTGEALGQVSSQTLTNLRLIDNVTDTL---------ILRPLISHDKENIINIAREIGTA 317

Query: 191 DL 192
           D 
Sbjct: 318 DF 319


>gi|307265214|ref|ZP_07546773.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919836|gb|EFN50051.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 387

 Score = 55.7 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 48/193 (24%), Gaps = 13/193 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV--- 61
           ++      +  SGG DSS            V  L+      +  +          +    
Sbjct: 24  MEINNRVAIGMSGGVDSSVAAYLLKKEGFDVIGLTMKVWVDHAAKAFDSDKSCCSLRATQ 83

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +     +      + +      ++ +  +      +      PN  V     I       
Sbjct: 84  DAKKVAEMLGVPHYTVD---FSEVFYDKIVNYFINEYLKGRTPNPCVLCNRQIKFGELLE 140

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMW 174
            A+ LG   I  G            R+        +         L  +       PL  
Sbjct: 141 KAFELGAYYIATGHYVRKDYDEKTKRYLLKKGIDSSKDQSYVLYRLTQKQLEHALFPLGN 200

Query: 175 LKKYETWKLAQDI 187
            KK E   LA+ +
Sbjct: 201 YKKEEIRALAEGL 213


>gi|253995996|ref|YP_003048060.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylotenera mobilis JLW8]
 gi|253982675|gb|ACT47533.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylotenera mobilis JLW8]
          Length = 369

 Score = 55.7 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/196 (12%), Positives = 50/196 (25%), Gaps = 13/196 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN    +    ++  SGG DSS        +   V  L     + +  +  C     + +
Sbjct: 1   MNLNKAQKKKIVVGLSGGVDSSVTALLLKQQGYEVTGLFMKNWEDDDTDEYCSSK--QDL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           ++ +        +   +            +  N   + Q    PN  +     I      
Sbjct: 59  IDAVSVADKIGID---IEAVNFSKEYKDRVFANFLSEYQAGRTPNPDILCNAEIKFKAFL 115

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK---- 176
             A  +G   I  G                +   +            ++   +       
Sbjct: 116 DHAMGMGADLIATGHYAQVRENPLQPGKFQLLKADDGSKDQSYFLYRLNQAQLSKTLFPL 175

Query: 177 ----KYETWKLAQDIG 188
               K E  ++A+  G
Sbjct: 176 GQHLKREVREIARSAG 191


>gi|255283411|ref|ZP_05347966.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bryantella formatexigens DSM 14469]
 gi|255266059|gb|EET59264.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bryantella formatexigens DSM 14469]
          Length = 357

 Score = 55.7 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 48/188 (25%), Gaps = 6/188 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS       ++   V  ++    Q  + + +        +  +   
Sbjct: 1   MKKKVVVGMSGGVDSSVAAWLLKEQGYDVVGVTMQIWQDEEEQTQEENGGCCGLSAVEDA 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            + +   +    +          +    A +      PN  +     +        +  +
Sbjct: 61  RRVAQTLEIPYYVMNFKAEFKEKVMDYFAQEYLCGRTPNPCIACNRYVKWEALLQRSLAI 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRA------IETAINLGMESHVTVHTPLMWLKKYET 180
           G   I  G                  A           NL  E       P+    K E 
Sbjct: 121 GADYIATGHYARIRQLPGGRYTICRSATAAKDQTYALYNLTQEQLAHTLMPVGEYTKEEI 180

Query: 181 WKLAQDIG 188
             +A+ IG
Sbjct: 181 RGIAEKIG 188


>gi|256752921|ref|ZP_05493754.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacter ethanolicus CCSD1]
 gi|256748201|gb|EEU61272.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacter ethanolicus CCSD1]
          Length = 172

 Score = 55.7 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 40/147 (27%), Gaps = 6/147 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV---ELECRLCVRKKIV 61
           ++      +  SGG DSS        +   V  L+      ++    + +   C  K   
Sbjct: 24  MEINNRVAIGMSGGVDSSVAAYLLKKQGFDVIGLTMRVWVDHEAKAFDSDKSCCSLKATQ 83

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +     +      + + L+ +      +   N          PN  V     I       
Sbjct: 84  DAKKVAEILGIPHYTVDLSKIFYDKIVNYFVNE---YLKGRTPNPCVLCNRQIKFGELLE 140

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRH 148
            A+ LG   I  G            R+
Sbjct: 141 KAFELGAYYIATGHYVRKEYDEKTKRY 167


>gi|224536736|ref|ZP_03677275.1| hypothetical protein BACCELL_01612 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521652|gb|EEF90757.1| hypothetical protein BACCELL_01612 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 350

 Score = 55.7 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 48/186 (25%), Gaps = 10/186 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIVE 62
           +K A   LL  SGG DSS       +    V  ++F +      E   +    +  ++  
Sbjct: 1   MKSAKRVLLGMSGGTDSSVAAMLLQEAGYEVTGVTFRFYDSEGFEESLDDARNLASRLNI 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
               +         + +    D   S+ T        +           + + + + +T 
Sbjct: 61  PHIIYDARELFRERI-IRYFVDEYLSAHTPVPCTLCNNELKWPLLAKIADEMGIYWISTG 119

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
            Y   +                D         +  +         +  P+    K E   
Sbjct: 120 HYVRKVFRDGYYFIAPAADRDKDQTFFLWGLQQNILE-------RMLLPMGDWTKNEVRA 172

Query: 183 LAQDIG 188
            A   G
Sbjct: 173 YAAKRG 178


>gi|254416844|ref|ZP_05030593.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Microcoleus chthonoplastes PCC 7420]
 gi|196176390|gb|EDX71405.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Microcoleus chthonoplastes PCC 7420]
          Length = 359

 Score = 55.7 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 46/162 (28%), Gaps = 10/162 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           I      ++  SGG DSS   +    +   V  L+        +      C  + +V+  
Sbjct: 3   IHVMKKVVVGLSGGVDSSVAAATLHHQGYEVVGLTL------WLMKGKGQCCSEGMVDAA 56

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA- 123
              +      HI+    +   +      +     +    P         +        A 
Sbjct: 57  FICEQLGIPHHIVDSREVFQANIVDYLVS---GYESGITPLPCSQCNKTVKFGPMLAYAR 113

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH 165
             LGI  I  G            R+  +RA+++  +     +
Sbjct: 114 ETLGIDKIATGHYARIRYDAKSDRYQLLRAVDSNKDQSYFLY 155


>gi|144899505|emb|CAM76369.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Magnetospirillum gryphiswaldense MSR-1]
          Length = 360

 Score = 55.7 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 43/138 (31%), Gaps = 8/138 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIV 61
           +      ++  SGG DSS   +   ++   V  ++   +D+GQ       C  C  K I 
Sbjct: 1   MTAKGRIVVAMSGGVDSSATAALLKEQGWDVVGVTLQLYDHGQAVCRPNTC--CAGKDIH 58

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +            +++    +    H+ +    A        P   V     +      +
Sbjct: 59  DARTVADVLGIPHYVMD---MESTFHADVVDKFAESYIRGETPIPCVLCNQTVKFRDLFS 115

Query: 122 LAYRLGITNIVIGVCETD 139
           +A  LG   +  G     
Sbjct: 116 IARDLGADALATGHYVQR 133


>gi|15605008|ref|NP_219792.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia trachomatis
           D/UW-3/CX]
 gi|237804632|ref|YP_002888786.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia trachomatis
           B/TZ1A828/OT]
 gi|255317389|ref|ZP_05358635.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia trachomatis 6276s]
 gi|6647880|sp|O84289|MNMA_CHLTR RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|3328701|gb|AAC67880.1| PP-loop superfamily ATPase [Chlamydia trachomatis D/UW-3/CX]
 gi|231272932|emb|CAX09843.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chlamydia trachomatis B/TZ1A828/OT]
 gi|296436728|gb|ADH18898.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia trachomatis G/11222]
 gi|297748416|gb|ADI50962.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chlamydia trachomatis D-EC]
 gi|297749296|gb|ADI51974.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chlamydia trachomatis D-LC]
          Length = 358

 Score = 55.7 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 54/186 (29%), Gaps = 9/186 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSF-DYGQRNKVELECRLCVRKKIVELM 64
              + ++  SGG DSS        +    V  L   ++G++++          + +  + 
Sbjct: 1   MRKTVIVAMSGGVDSSVVAYLLKKQGEYNVVGLFMKNWGEQDENGECTATKDFRDVERIA 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            +            ++   +      ++ +             +  R I F +    +  
Sbjct: 61  EQLSIPYYT-----VSFSKEYKERVFSRFLREYANGYTPNPDVLCNREIKFDLLQKKVRE 115

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYETWK 182
             G        C     G    R       ++    G        V  PL  + K E  +
Sbjct: 116 LKGDFLATGHYCRGGADGTGLSRGIDPNKDQSYFLCGTPKDALSNVLFPLGGMYKTEVRR 175

Query: 183 LAQDIG 188
           +AQ+ G
Sbjct: 176 IAQEAG 181


>gi|312971270|ref|ZP_07785448.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli 1827-70]
 gi|310336472|gb|EFQ01658.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli 1827-70]
          Length = 234

 Score = 55.7 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 177 QVRKIAEDLG 186


>gi|307720640|ref|YP_003891780.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sulfurimonas autotrophica DSM 16294]
 gi|306978733|gb|ADN08768.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sulfurimonas autotrophica DSM 16294]
          Length = 341

 Score = 55.7 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 51/189 (26%), Gaps = 17/189 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR---NKVELECRLCVRKKIVEL 63
                L+  SGG DS+       ++   VE L      +   +++           +   
Sbjct: 1   MKEKVLVGMSGGVDSTITSLLLKEQGYEVEGLYMKLHSKPGYHEIHQARAQKAADFVGIK 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +                 L +  +  + +       +   PN        +        A
Sbjct: 61  LHVL-------------DLQETFNEKVFQPFIDTYAEGKTPNPCALCNRNLKFGEMIKFA 107

Query: 124 YRLGITNIVIGVC-ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
             +G   +  G   +TD         DT         +  E    +  PL    K +  +
Sbjct: 108 DEIGAQYLATGHYIKTDGEYLYAADDDTKDQSYFLFYINREILPRLKFPLGERHKKDIKE 167

Query: 183 LAQDIGGQD 191
           LA  I G +
Sbjct: 168 LAASIKGLE 176


>gi|298387971|ref|ZP_06997519.1| GMP synthase, C- domain protein [Bacteroides sp. 1_1_14]
 gi|298259237|gb|EFI02113.1| GMP synthase, C- domain protein [Bacteroides sp. 1_1_14]
          Length = 435

 Score = 55.7 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 52/183 (28%), Gaps = 20/183 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +  L    + +  +  ++G   K E E        +     + 
Sbjct: 141 KKVLLALSGGVDSSVVAALLLKAIGENLVCVHVNHGLMRKGESE------DVVEVFSNQL 194

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           K +L    +     L  ++     +     I    +       R +             G
Sbjct: 195 KANLVYVDVTD-RFLDKLAGVEDPEQKRKIIGGEFIRVFEEEARKLD------------G 241

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           +++      L  +    +  PL  L K E      ++
Sbjct: 242 IDFLGQGTIYPDIVESGTKTAKMVKSHHNVGGLPEDLKFQLVEPLRQLFKDEVRACGLEL 301

Query: 188 GGQ 190
           G  
Sbjct: 302 GLP 304


>gi|295690747|ref|YP_003594440.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Caulobacter segnis ATCC 21756]
 gi|295432650|gb|ADG11822.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Caulobacter segnis ATCC 21756]
          Length = 409

 Score = 55.7 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 51/187 (27%), Gaps = 11/187 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +        V  ++   Y     +  +   C  + I++     +
Sbjct: 39  RIVAAMSGGVDSTVTAALLARAGYDVVGVTLQLYDHGAAISRKGACCAGQDILDARMAAE 98

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L            + ++ A        P   V     +       +A  LG 
Sbjct: 99  RIGIPHYVLD---YESRFREQVIEDFADAYLRGETPIPCVRCNQTVKFRDLLDVARDLGA 155

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-------TVHTPLMWLKKYETW 181
             +  G            R    RA + A +               +  PL  + K    
Sbjct: 156 EAMATGHYVQRGMPAGTNRPQLRRAADPAKDQSYFLFATTREQLDFLRFPLGGMDKPTVR 215

Query: 182 KLAQDIG 188
            +A  +G
Sbjct: 216 AVAAGLG 222


>gi|317047745|ref|YP_004115393.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pantoea sp. At-9b]
 gi|316949362|gb|ADU68837.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pantoea sp. At-9b]
          Length = 370

 Score = 55.7 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 52/200 (26%), Gaps = 27/200 (13%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC-------- 52
           M+D        ++  SGG DSS        +  +VE L     + +  E  C        
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAADDLAD 58

Query: 53  RLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN 112
              V  K+   + K                 +   +     +             +  + 
Sbjct: 59  AQAVCDKLGIKLHKVN------------FAAEYWDNVFEHFLEEYKAGRTPNPDILCNKE 106

Query: 113 IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVT 167
           I F  F    A  LG   I  G            R                 L  E    
Sbjct: 107 IKFKAFLEFAAEDLGADFIATGHYVRRQDIDGQSRLLRGLDGNKDQSYFLYTLSHEQVAQ 166

Query: 168 VHTPLMWLKKYETWKLAQDI 187
              P+  L+K E  ++A+ +
Sbjct: 167 SLFPVGELEKPEVRRIAEQL 186


>gi|29347829|ref|NP_811332.1| putative GMP synthase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253572215|ref|ZP_04849619.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|44887958|sp|Q8A525|GUAA2_BACTN RecName: Full=Putative GMP synthase [glutamine-hydrolyzing] 2;
           AltName: Full=GMP synthetase 2; AltName: Full=Glutamine
           amidotransferase 2
 gi|29339731|gb|AAO77526.1| putative GMP synthase, glutamine-hydrolyzing [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|251838395|gb|EES66482.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 435

 Score = 55.7 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 52/183 (28%), Gaps = 20/183 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +  L    + +  +  ++G   K E E        +     + 
Sbjct: 141 KKVLLALSGGVDSSVVAALLLKAIGENLVCVHVNHGLMRKGESE------DVVEVFSNQL 194

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           K +L    +     L  ++     +     I    +       R +             G
Sbjct: 195 KANLVYVDVTD-RFLDKLAGVEDPEQKRKIIGGEFIRVFEEEARKLD------------G 241

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           +++      L  +    +  PL  L K E      ++
Sbjct: 242 IDFLGQGTIYPDIVESGTKTAKMVKSHHNVGGLPEDLKFQLVEPLRQLFKDEVRACGLEL 301

Query: 188 GGQ 190
           G  
Sbjct: 302 GLP 304


>gi|14521010|ref|NP_126485.1| GMP synthase subunit B [Pyrococcus abyssi GE5]
 gi|13626967|sp|Q9V0I7|GUAAB_PYRAB RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
           AltName: Full=GMP synthetase
 gi|5458227|emb|CAB49716.1| guaA-C GMP synthase [glutamine-hydrolyzing] pyrophosphatase subunit
           (EC 6.3.5.2) [Pyrococcus abyssi GE5]
          Length = 308

 Score = 55.7 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 60/185 (32%), Gaps = 25/185 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A++  SGG DSST    A     D++  +  + G   K E E    V K   +      
Sbjct: 22  KAIIALSGGVDSSTAAVLAYKAIGDKLHAVFVNTGFLRKGEPEF---VVKTFRDEFGMNL 78

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             +        + L  ++     + +                   +F+     +A  +G 
Sbjct: 79  HYVDAQDRF-FSALKGVTDPEEKRKIIG----------------RVFIEVFEEVAREIGA 121

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++        +         I++      L    ++ +  PL  L K E  +LA+ +G
Sbjct: 122 EYLIQ----GTIAPDWIESQGKIKSHHNVGGLPERLNLKLIEPLRDLYKDEVRELAKFLG 177

Query: 189 GQDLV 193
             + +
Sbjct: 178 LPEKI 182


>gi|238791416|ref|ZP_04635054.1| Thiamine biosynthesis protein thiI [Yersinia intermedia ATCC 29909]
 gi|238729032|gb|EEQ20548.1| Thiamine biosynthesis protein thiI [Yersinia intermedia ATCC 29909]
          Length = 483

 Score = 55.7 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 54/182 (29%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++       
Sbjct: 181 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------SAHEI--GVKQVAHYLWSR 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 232 FGSSHRVRFVAI-------DFEPVVGEILEKVEDGQMGVVLKRMMVRAASQVAERYGVQA 284

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I      +         +  PL+   K     LA+ IG +
Sbjct: 285 LVTGEALGQVSSQTLTNLRLIDNASDTL---------ILRPLISHDKEHIINLARHIGTE 335

Query: 191 DL 192
           D 
Sbjct: 336 DF 337


>gi|325290391|ref|YP_004266572.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Syntrophobotulus glycolicus DSM 8271]
 gi|324965792|gb|ADY56571.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Syntrophobotulus glycolicus DSM 8271]
          Length = 352

 Score = 55.7 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 51/194 (26%), Gaps = 11/194 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +  SGG DSS            V  ++     + + + E   C    + +       
Sbjct: 3   KVFVAMSGGVDSSVAALLLKREGYDVVGVTMQIWPQPE-DKEKACCSLDAVNDARRVAWK 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                ++L      D     + +    +      PN  +     +        A  +G  
Sbjct: 62  LGIPHYVLN---FRDDFEEKVIRYFCREYLAGRTPNPCIACNRYLKFDLFLQKALAMGAD 118

Query: 130 NIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
            I  G            R+        T        NL  +       PL   KK ET K
Sbjct: 119 YISTGHYARIRRNEQTERYELRKGLDQTKDQSYALYNLQQDQLQHTLFPLGTYKKEETRK 178

Query: 183 LAQDIGGQDLVNLI 196
           LAQ+ G        
Sbjct: 179 LAQEGGLPVAFKKD 192


>gi|257462397|ref|ZP_05626811.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
           [Fusobacterium sp. D12]
 gi|317060061|ref|ZP_07924546.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium sp. D12]
 gi|313685737|gb|EFS22572.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium sp. D12]
          Length = 350

 Score = 55.7 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 54/178 (30%), Gaps = 19/178 (10%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC-RLCVRKKIVELMPKWKDSL 71
           +  SGG DSST       R   +  ++     R   E +     V + +           
Sbjct: 17  IALSGGVDSSTVAYLLKKRGYDIFGVTM----RTCHEEDADAKKVCQDLG---------- 62

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
            + ++L L              V   +Q        V  R  I            G   +
Sbjct: 63  IQHYVLDLTEDFSEKVMDYF--VEEYMQGRTPNPCMVCNR-HIKFGKLLDFILEQGAQYM 119

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLAQDIG 188
             G       G+     D  +     ++   +  +  +  P+  L+K +  +LA+++G
Sbjct: 120 ATGHYTKLVDGHLSVGDDGGKDQVYFLSQVPKEKLKNIIFPVGDLEKRQVRELAKELG 177


>gi|78211601|ref|YP_380380.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Synechococcus sp. CC9605]
 gi|123579036|sp|Q3ANK7|GUAA_SYNSC RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|78196060|gb|ABB33825.1| GMP synthase [Synechococcus sp. CC9605]
          Length = 528

 Score = 55.7 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 50/190 (26%), Gaps = 19/190 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST          D++  +  D G   K E E                
Sbjct: 225 KRVLLALSGGVDSSTLAFLLKKAIGDQLTCMFIDQGFMRKGEPEF--------------L 270

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D       + +  +                ++          R              L 
Sbjct: 271 MDFFDRKFNIHVEYINARQRFIGKLEGITDPEEKRKIIGTEFIRVFEEESKRLGPFDYLA 330

Query: 128 ITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              +   V E+  +       +     I++      L  +    +  PL  L K E  K+
Sbjct: 331 QGTLYPDVIESAGTNVDPKTGERVAVKIKSHHNVGGLPKDLQFKLVEPLRKLFKDEVRKV 390

Query: 184 AQDIGGQDLV 193
            + +G  + +
Sbjct: 391 GRSLGLPEEI 400


>gi|303286641|ref|XP_003062610.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226456127|gb|EEH53429.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 758

 Score = 55.7 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 55/200 (27%), Gaps = 30/200 (15%)

Query: 11  AL-LLFSGGQDSSTCLSWALDR-------FDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           A+ +  SGG DS                    V  +  DY  R +  +E          +
Sbjct: 278 AVGISLSGGVDSMALAVILKRLSRDASYGGFDVVAMHIDYDNRPESGVEA---------D 328

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
            +  W D +G + ++            +T+ V  + Q          G         A  
Sbjct: 329 FVRGWCDRMGIECVVRKIA-------EVTRGVTPREQYEAESRAIRYGFYKDVAKTHAFP 381

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A  +G           +       R   + A+      G+   V +  P++   K     
Sbjct: 382 AVFVG----HHEGDVQENIIANLMRGANLLAVNGMEETGVVEGVAIWRPMLPHSKAVVLD 437

Query: 183 LAQDIGGQDLVNLILEESHT 202
            A   G    ++     + +
Sbjct: 438 FAHKYGVPYFLDS--TPTWS 455


>gi|307243697|ref|ZP_07525837.1| GMP synthase (glutamine-hydrolyzing) [Peptostreptococcus stomatis
           DSM 17678]
 gi|306492906|gb|EFM64919.1| GMP synthase (glutamine-hydrolyzing) [Peptostreptococcus stomatis
           DSM 17678]
          Length = 511

 Score = 55.7 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 51/189 (26%), Gaps = 21/189 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCV-RKKIVELMPK 66
             AL   SGG DSS   +       D +  +  D+G   K E +    + R+K    + +
Sbjct: 216 KKALCALSGGVDSSVAAALMHRAIGDNLTCVFVDHGLLRKNEGDDVERIFRQKFGMNLIR 275

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                          LG ++  +  +     I +          R              L
Sbjct: 276 VNAED--------RFLGKLAGVTEPEAKRKIIGEEF-------IRVFEAESQKLGKMDFL 320

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   + E                              +  PL  L K E  K+  +
Sbjct: 321 VQGTIYPDIVE----SGNGESATIKSHHNVGGLPEDVDFQEIIEPLRELFKDEVRKIGLE 376

Query: 187 IGGQDLVNL 195
           +G ++ +  
Sbjct: 377 LGIEENLIF 385


>gi|149372147|ref|ZP_01891417.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [unidentified eubacterium SCB49]
 gi|149354914|gb|EDM43476.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [unidentified eubacterium SCB49]
          Length = 418

 Score = 55.7 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 35/137 (25%), Gaps = 3/137 (2%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K    ++  SGG DSS       ++   V  L       + V +           + M  
Sbjct: 20  KKKRVVVGLSGGVDSSVTAYLLKEQGYEVIGLFMKNWHDDSVTISDECPWLDDSNDAMLV 79

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +        +    L       +   +  + +    PN  V     I       +A  L
Sbjct: 80  AQALDIPFQTVD---LSAEYKERIVDYMFREYKMGRTPNPDVLCNREIKFDVFLKIALEL 136

Query: 127 GITNIVIGVCETDYSGY 143
           G   +  G         
Sbjct: 137 GADFVATGHYCRKGISQ 153


>gi|56419544|ref|YP_146862.1| tRNA-specific 2-thiouridylase MnmA [Geobacillus kaustophilus
           HTA426]
 gi|81347762|sp|Q5L186|MNMA1_GEOKA RecName: Full=tRNA-specific 2-thiouridylase mnmA 1
 gi|56379386|dbj|BAD75294.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Geobacillus kaustophilus HTA426]
          Length = 370

 Score = 55.7 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 43/186 (23%), Gaps = 10/186 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K    ++  SGG DSS            V  +          +  C     +   ++   
Sbjct: 2   KKKRVVVGMSGGVDSSVAAYLLKQEGYDVIGVFMKNWDDTNDDGVC--TATEDYEDVKRV 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   + +      +      T  +    +        +     I        A  L
Sbjct: 60  ANQLGIPYYSVN--FEKEYWDRVFTYFIDELKRGRTPNPDVLC-NTEIKFKAFVDYALSL 116

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAI-----NLGMESHVTVHTPLMWLKKYETW 181
               I  G                 +            L  E    V  P+  L K E  
Sbjct: 117 DADYIATGHYARINRENGQIALLRGKDPNKDQTYFLSQLTAEHLSKVLFPIGELTKDEVR 176

Query: 182 KLAQDI 187
           K+AQ++
Sbjct: 177 KIAQEL 182


>gi|85702766|ref|ZP_01033870.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Roseovarius sp. 217]
 gi|85671694|gb|EAQ26551.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Roseovarius sp. 217]
          Length = 383

 Score = 55.7 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 49/186 (26%), Gaps = 6/186 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +        V  ++   Y     +  +   C    I +     +
Sbjct: 22  RVVVAMSGGVDSSVVAAHLASEGYDVVGVTLQLYDHGAALAKKGACCAGVDIHDARRVAE 81

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +     ++L    +   +      +  +                   L+  A        
Sbjct: 82  EMGFPHYVLDYENIFRDAVIDEFADSYLAGATPVPCIRCNERVKFKDLLETARDLEA-DC 140

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL----KKYETWKLA 184
                 +     S  P+    +  A + +  L   +   +      L     K  T +LA
Sbjct: 141 MATGHYIQRKLGSQGPELHCASDSARDQSYFLFSTTPEQLDYLRFPLGHLPSKAATRELA 200

Query: 185 QDIGGQ 190
              G Q
Sbjct: 201 AQYGLQ 206


>gi|298675346|ref|YP_003727096.1| argininosuccinate synthase [Methanohalobium evestigatum Z-7303]
 gi|298288334|gb|ADI74300.1| argininosuccinate synthase [Methanohalobium evestigatum Z-7303]
          Length = 395

 Score = 55.3 bits (131), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 59/207 (28%), Gaps = 10/207 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +    +L +SGG D+S C+    +   +D V T++ + GQ  + E++      +KI +
Sbjct: 1   MPEPKKVVLAYSGGLDTSVCIPLLKEEYGYDEVITVAVNVGQ-PEEEIKEADEKAEKISD 59

Query: 63  LMPKWKDS--LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                        D+I PL          +      +                  L    
Sbjct: 60  KHYTIDARKEFVNDYIFPLIKANGDYEGYVMGTSVARPLIAKKVVEVAEKEKASALSHGC 119

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           T      +    +          P    +  R  E          V+V T   W      
Sbjct: 120 TGKGNDQLRFEAVFRLTDLEVIAPMRDMNLTREWEIEYAKKHGIPVSVTTGEPWSIDENI 179

Query: 181 WKLAQDIGGQD-----LVNLILEESHT 202
           W  + + G  +         I   + +
Sbjct: 180 WSRSIEGGELEDPACAPPQEIYSWTVS 206


>gi|256822321|ref|YP_003146284.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Kangiella koreensis DSM 16069]
 gi|256795860|gb|ACV26516.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Kangiella koreensis DSM 16069]
          Length = 367

 Score = 55.3 bits (131), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 52/193 (26%), Gaps = 10/193 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D   +    ++  SGG DSS        +  +VE L     + +  +  C     + +
Sbjct: 1   MTDKAPENTHVIVGMSGGVDSSVSAYLLKKQGYQVEGLFMKNWEEDDTDEYCS--AAEDL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          +   +            + +    + +    PN  +     I      
Sbjct: 59  ADAQAVCDKLGIKLRTVN---FAAEYWDRVFEYFLEEYKAGRTPNPDIMCNKEIKFKAFL 115

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G                              +  E       P+  +
Sbjct: 116 DYAQLLGADYIATGHYVRRGEADGKATLLRGLDLNKDQSYFLYGVSHEKIAKTLFPVGCI 175

Query: 176 KKYETWKLAQDIG 188
           +K E  K+A++ G
Sbjct: 176 EKPEVRKIAEEQG 188


>gi|254500068|ref|ZP_05112221.1| hypothetical protein SADFL11_106 [Labrenzia alexandrii DFL-11]
 gi|222441535|gb|EEE48212.1| hypothetical protein SADFL11_106 [Labrenzia alexandrii DFL-11]
          Length = 457

 Score = 55.3 bits (131), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/235 (10%), Positives = 52/235 (22%), Gaps = 33/235 (14%)

Query: 11  ALLLFSGGQDS-STCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A++ FS G DS +           ++                       ++         
Sbjct: 144 AIMAFSDGMDSRAVAGLIGSGLGPKLV----------------------RVRVGSNDIGR 181

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              ++   P  ++      ++    A                  +       +       
Sbjct: 182 PDKKNRREPFTMVPYDVPCNMPNREASARSRGFKFALISGIAAYLSGASEIIIPESGQGA 241

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                                 + +E  +       +    P +W  K ET +    +  
Sbjct: 242 IGPAIAPVVHAYPDYRNHPRFTQRMERLLKALFGKEIRYVFPRLWNTKGETLRSFATLPE 301

Query: 190 QDLVNLILEESHTCYLGKRD-KRYEWGYGCNSCPACYLRQ-----KGWMEFKEKY 238
                     + +C+   R          C  C AC LR+      G  E  + Y
Sbjct: 302 GSN----WHTTRSCWRSNRWCSVNGKRRQCGVCAACMLRRLSVHAAGLTEADDAY 352


>gi|317125511|ref|YP_004099623.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Intrasporangium calvum DSM 43043]
 gi|315589599|gb|ADU48896.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Intrasporangium calvum DSM 43043]
          Length = 365

 Score = 55.3 bits (131), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/223 (12%), Positives = 53/223 (23%), Gaps = 17/223 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR--KKIVELMPKW 67
             +   SGG DS+   +  LD    V  +     Q      E        +   +     
Sbjct: 2   RVVAAMSGGVDSAVAAARMLDAGHDVVGVHLALSQSAATLRESARGCCTIEDAGDARRVA 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                  ++     + +     + ++   +      PN  +     I        A  LG
Sbjct: 62  DVLGIPFYVWD---MAERFRRDVVEDFTAEYARGRTPNPCLRCNEKIKFAALLDKAIALG 118

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV----------TVHTPLMWLKK 177
              +  G                        +   +S+V              PL    K
Sbjct: 119 FDAVATGHYAQVVEVPGVGGGVRRELHRAVDSAKDQSYVLGVLDAEQLARAFFPLGDTTK 178

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNS 220
            +  + A + G          +   C++   D R   G     
Sbjct: 179 PQIREEAAERGFFVARKPDSHDI--CFIPDGDTRAWLGRALGE 219


>gi|260426477|ref|ZP_05780456.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Citreicella sp. SE45]
 gi|260420969|gb|EEX14220.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Citreicella sp. SE45]
          Length = 380

 Score = 55.3 bits (131), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 46/186 (24%), Gaps = 10/186 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +   +    V  ++   Y     +  +   C    I +     +
Sbjct: 21  RVVVAMSGGVDSSVVAAMLAEEGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDARRVAE 80

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L    +      ++    A        P   +     +        A  L  
Sbjct: 81  QMGFPHYVLDYENI---FRDAVIDEFAESYLGGATPVPCIRCNERVKFKDLLETAKDLDA 137

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIET----AINLGMESHVTVHTPLMWL--KKYETWK 182
             +  G       G       +           +       ++     +     K ET  
Sbjct: 138 DCMATGHYIQRMVGDRGPELHSAADANRDQSYFLFSTTPEQLSFLRFPLGHLKSKAETRA 197

Query: 183 LAQDIG 188
           LA   G
Sbjct: 198 LAAKYG 203


>gi|37679527|ref|NP_934136.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio vulnificus YJ016]
 gi|61217310|sp|Q7MLT4|MNMA_VIBVY RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|37198271|dbj|BAC94107.1| predicted tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase [Vibrio vulnificus YJ016]
          Length = 374

 Score = 55.3 bits (131), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 52/195 (26%), Gaps = 13/195 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +VE L     + +     C     + +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDDSEYC--TAAEDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +            H +      +   +     ++            +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIHLHKIN--FAAEYWDNVFEYFLSEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDT-------IRAIETAINLGMESHVTVHTPLM 173
                L    I +G            +                   L  E       P+ 
Sbjct: 115 FADEVLDADYIAMGHYVRRSFPENGEKPQMLRGLDGNKDQSYFLYTLSHEQVARSLFPVG 174

Query: 174 WLKKYETWKLAQDIG 188
            L+K E  ++A++ G
Sbjct: 175 ELEKPEVRRIAEEQG 189


>gi|225631290|ref|ZP_03787968.1| tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Wolbachia endosymbiont of Muscidifurax uniraptor]
 gi|225591011|gb|EEH12215.1| tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Wolbachia endosymbiont of Muscidifurax uniraptor]
          Length = 370

 Score = 55.3 bits (131), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 57/182 (31%), Gaps = 8/182 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
            A++  SGG DSS   +   +   +V  ++   YG           C   + +    +  
Sbjct: 20  KAVVAMSGGVDSSVAAALLHNLGYQVIGVTLQLYGTDGNANARKGACCAGQDIYDAKRVA 79

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +S+G  H +      +I    + ++ A        P   V     +       +   LG 
Sbjct: 80  ESVGFPHYI--LNYEEIFKKEVIEDFASTYMRGETPIPCVRCNQTVKFRDLLQVTKNLGA 137

Query: 129 TNIVIGVC----ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM-WLKKYETWKL 183
             +V G      E +         D  +     +    +  + +    +    K +  KL
Sbjct: 138 DVLVTGHYVRRLEKNGEVKLCRSIDKSKDQSYFLFATTQEQLKLLRFPLGGFYKSDIRKL 197

Query: 184 AQ 185
           A+
Sbjct: 198 AK 199


>gi|325474722|gb|EGC77908.1| thiamine biosynthesis protein ThiI [Treponema denticola F0402]
          Length = 387

 Score = 55.3 bits (131), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 52/181 (28%), Gaps = 25/181 (13%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS       L R  +++ + F                + K+ +L               
Sbjct: 186 IDSPVAGFKMLTRGMKLDYIYFH------SHPYTSPEAQAKVEKLAGILAGY-------- 231

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
              LG   +      V  +I++ +          I  +  A   A  +    ++ G    
Sbjct: 232 --GLGGYLNIIPFTKVQQQIREKSPEAYLTLMMRICMMKIANMTARGINSKCLITGESLA 289

Query: 139 DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
             +          + +E        +   V  PL+ L K E    A++IG  +   L  E
Sbjct: 290 QVAS---------QTVENLTVTNSYAEFPVFRPLIGLDKEEITIEAKEIGTYETSILPHE 340

Query: 199 E 199
           +
Sbjct: 341 D 341


>gi|116074322|ref|ZP_01471584.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Synechococcus sp. RS9916]
 gi|116069627|gb|EAU75379.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Synechococcus sp. RS9916]
          Length = 528

 Score = 55.3 bits (131), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 52/190 (27%), Gaps = 19/190 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST          D++  +  D G   K E E                
Sbjct: 225 KRVLLALSGGVDSSTLAFLLKKAIGDQLTCMFIDQGFMRKGEPEF--------------L 270

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D       + +  +          N     ++          R              L 
Sbjct: 271 MDFFDRKFNIHVEYINARQRFLAKLNGITDPEEKRKIIGTEFIRVFEEESKRLGPFDYLA 330

Query: 128 ITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              +   V E+  +       +     I++      L  +    +  PL  L K E  K+
Sbjct: 331 QGTLYPDVIESAGTNVDPKTGERVAVKIKSHHNVGGLPKDLQFKLVEPLRKLFKDEVRKV 390

Query: 184 AQDIGGQDLV 193
            +++G  + +
Sbjct: 391 GRNLGLPEEI 400


>gi|222054223|ref|YP_002536585.1| Argininosuccinate synthase [Geobacter sp. FRC-32]
 gi|254807525|sp|B9M374|ASSY_GEOSF RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|221563512|gb|ACM19484.1| Argininosuccinate synthase [Geobacter sp. FRC-32]
          Length = 406

 Score = 55.3 bits (131), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 55/198 (27%), Gaps = 11/198 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L +SGG D+S  L W  +     V T S D GQ +++                   
Sbjct: 7   KKIVLAYSGGLDTSIILKWLKNEYGCEVITFSADLGQGDELAPIREKAFA------TGAD 60

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           K  + +     +         +        +   ++    +  R +         A   G
Sbjct: 61  KVYIDDLKEEFVRDFVYPMFRANAIYEGHYLLGTSIARPLIAKRQMEIAKIEGADAVSHG 120

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP----LMWLKKYETWKL 183
            T         +   Y      T+ A      L     +  +       + + K   W  
Sbjct: 121 ATGKGNDQVRFELGYYHFNPAITVIAPWRDWKLNSRQALVNYAKKNDIPIPVTKKRPWSS 180

Query: 184 AQDIGGQDLVNLILEESH 201
            +++        ILE++ 
Sbjct: 181 DRNLLHISFEGAILEDTW 198


>gi|146300143|ref|YP_001194734.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Flavobacterium johnsoniae UW101]
 gi|205816863|sp|A5FHA9|MNMA_FLAJO RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|146154561|gb|ABQ05415.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Flavobacterium johnsoniae UW101]
          Length = 395

 Score = 55.3 bits (131), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 49/188 (26%), Gaps = 12/188 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS        +   V  L       + V +       +   + +   +
Sbjct: 2   KRVVVGLSGGVDSSVAAYLLQQQGYEVIGLFMKNWHDDSVTISNECPWLEDSNDALLVAE 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   +    L +     +   +  + +    PN  V     I       +A  LG 
Sbjct: 62  KLGIPFQTVD---LSEEYKEKIVDYMFNEYEKGRTPNPDVLCNREIKFDVFMKIALSLGA 118

Query: 129 TNIVIGVCETDYSGYPDCRHDTI---------RAIETAINLGMESHVTVHTPLMWLKKYE 179
             +  G          D +                     L  E       P+  L K E
Sbjct: 119 DYVATGHYCQKSEIEVDGKTVYQLIAGNDVNKDQSYFLCQLSQEQLSKALFPIGALTKPE 178

Query: 180 TWKLAQDI 187
             ++A ++
Sbjct: 179 VREIAAEM 186


>gi|33864583|ref|NP_896142.1| GMP synthase [Synechococcus sp. WH 8102]
 gi|44887992|sp|Q7UA53|GUAA_SYNPX RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|33632106|emb|CAE06562.1| GMP synthase (glutamine-hydrolysing) [Synechococcus sp. WH 8102]
          Length = 528

 Score = 55.3 bits (131), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 50/191 (26%), Gaps = 19/191 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSST          D++  +  D G   K E E               
Sbjct: 224 EKRVLLALSGGVDSSTLAFLLKKAIGDQLTCMFIDQGFMRKGEPEF-------------- 269

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D       + +  +                ++          R              L
Sbjct: 270 LMDFFDRKFNIHVEYINARQRFISKLKGITDPEEKRKIIGTEFIRVFEEESKRLGPFDYL 329

Query: 127 GITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
               +   V E+  +       +     I++      L  +    +  PL  L K E  K
Sbjct: 330 AQGTLYPDVIESAGTNVDPKTGERVAVKIKSHHNVGGLPKDLQFKLVEPLRKLFKDEVRK 389

Query: 183 LAQDIGGQDLV 193
           + + +G  + +
Sbjct: 390 VGRALGLPEEI 400


>gi|304415287|ref|ZP_07395979.1| sulfurtransferase required for thiamine and 4-thiouridine
           biosynthesis [Candidatus Regiella insecticola LSR1]
 gi|304282861|gb|EFL91332.1| sulfurtransferase required for thiamine and 4-thiouridine
           biosynthesis [Candidatus Regiella insecticola LSR1]
          Length = 486

 Score = 55.3 bits (131), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 55/185 (29%), Gaps = 31/185 (16%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV---ELMPKW 67
            L L SGG DS       + R  RV    F+ G            V  ++         W
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHFCFFNLGG-----------VAHELGVKQVAYHLW 228

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                   +  ++I      + +   V+   +   L    +     I        A R  
Sbjct: 229 HRFSRCHRVRFVSIDFAEVVAEILTKVSDSQRGVVLKRMMIRAATKI--------AERYK 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  IV G      S         I  +   +         +  PL+   K +  +LA++I
Sbjct: 281 VQAIVTGEALGQVSSQTLTNLHVIDNVSDTL---------ILRPLIAHDKEQIIRLAREI 331

Query: 188 GGQDL 192
           G ++ 
Sbjct: 332 GTEEF 336


>gi|62185345|ref|YP_220130.1| hypothetical protein CAB732 [Chlamydophila abortus S26/3]
 gi|81312504|sp|Q5L5B2|TILS_CHLAB RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
          Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
          Full=tRNA(Ile)-lysidine synthetase
 gi|62148412|emb|CAH64179.1| conserved hypothetical protein [Chlamydophila abortus S26/3]
          Length = 317

 Score = 55.3 bits (131), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 23/67 (34%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          +    S LL  SGG DS   L     R      +  DYG R     E      +   E +
Sbjct: 19 LDMKKSYLLALSGGSDSLFLLYLLKSRGVSFTAVHVDYGWRESSYREAEELKLRCQEEGV 78

Query: 65 PKWKDSL 71
          P   D +
Sbjct: 79 PLIVDHV 85


>gi|333029750|ref|ZP_08457811.1| Argininosuccinate synthase [Bacteroides coprosuis DSM 18011]
 gi|332740347|gb|EGJ70829.1| Argininosuccinate synthase [Bacteroides coprosuis DSM 18011]
          Length = 401

 Score = 55.3 bits (131), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 45/173 (26%), Gaps = 12/173 (6%)

Query: 7   KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L FSGG D S   +  + D    V T   + G  ++ EL+       ++     
Sbjct: 1   MKKKVVLAFSGGLDTSFCAMYLSKDLGYDVYTAIANTGGFDEEELKTIEEKAYRLGAKEH 60

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                      + L +  +    S+   +   +  N      V    I   +  A  A  
Sbjct: 61  -----------VTLDVTQEYYDKSIKYMIYGNVLRNGTYPISVSSERIFQAIAIANYAKE 109

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
           +    I  G                + A    I       V      +   K 
Sbjct: 110 INADAIAHGSTGAGNDQIRFDLTFDVLAPNIEIITPTRDMVLTREYEINYLKD 162


>gi|318043016|ref|ZP_07974972.1| GMP synthase [Synechococcus sp. CB0101]
          Length = 531

 Score = 55.3 bits (131), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 51/190 (26%), Gaps = 19/190 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST          D++  +  D G   K E E                
Sbjct: 228 KRVLLALSGGVDSSTLAFLLHKAIGDQLTCMFIDQGFMRKGEPEF--------------L 273

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +   +   + +  +                ++          R              L 
Sbjct: 274 VEFFDKRFHINVEYINARERFINKLEGVTDPEEKRKLIGTEFIRVFEEESKRLGPFDYLA 333

Query: 128 ITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              +   V E+  +       +     I++      L  +    +  PL  L K E  K+
Sbjct: 334 QGTLYPDVIESAGTNVDPKTGERVAVKIKSHHNVGGLPKDLQFKLVEPLRKLFKDEVRKV 393

Query: 184 AQDIGGQDLV 193
            + +G  + +
Sbjct: 394 GRTLGLPEEI 403


>gi|282895929|ref|ZP_06303969.1| Glutamine amidotransferase, class-I [Raphidiopsis brookii D9]
 gi|281199174|gb|EFA74043.1| Glutamine amidotransferase, class-I [Raphidiopsis brookii D9]
          Length = 540

 Score = 55.3 bits (131), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 55/189 (29%), Gaps = 19/189 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSST          D++  +  D G   K+E E    + K   E      
Sbjct: 238 RVLLALSGGVDSSTLAFLLHKAIGDQLTCVFIDQGFMRKLEPE---RLLKLFQEQFHIPV 294

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           + +        AI G               ++          R              L  
Sbjct: 295 EYVNARDRFINAIAG-----------VTDPEEKRRRIGHEFIRVFEETSKRLGHFDYLAQ 343

Query: 129 TNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             +   V E+  +       +     I++      L  +    +  PL  L K E  K+ 
Sbjct: 344 GTLYPDVIESAGTNVDPKTGERVAVKIKSHHNVGGLPKDLRFKLVEPLRKLFKDEVRKVG 403

Query: 185 QDIGGQDLV 193
           + +G  + +
Sbjct: 404 RSLGLPEEI 412


>gi|282899767|ref|ZP_06307730.1| Glutamine amidotransferase, class-I [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195382|gb|EFA70316.1| Glutamine amidotransferase, class-I [Cylindrospermopsis raciborskii
           CS-505]
          Length = 540

 Score = 55.3 bits (131), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 55/189 (29%), Gaps = 19/189 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSST          D++  +  D G   K+E E    + K   E      
Sbjct: 238 RVLLALSGGVDSSTLAFLLHKAIGDQLTCVFIDQGFMRKLEPE---RLLKLFQEQFHIPV 294

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           + +        AI G               ++          R              L  
Sbjct: 295 EYVNARDRFINAIAG-----------VTDPEEKRRRIGHEFIRVFEETSKRLGHFDYLAQ 343

Query: 129 TNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             +   V E+  +       +     I++      L  +    +  PL  L K E  K+ 
Sbjct: 344 GTLYPDVIESAGTNVDPKTGERVAVKIKSHHNVGGLPKDLRFKLVEPLRKLFKDEVRKVG 403

Query: 185 QDIGGQDLV 193
           + +G  + +
Sbjct: 404 RSLGLPEEI 412


>gi|257094501|ref|YP_003168142.1| tRNA-specific 2-thiouridylase MnmA [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257047025|gb|ACV36213.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Accumulibacter phosphatis clade IIA str.
           UW-1]
          Length = 366

 Score = 55.3 bits (131), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 52/184 (28%), Gaps = 10/184 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K  + ++  SGG DSS       ++   V  L     + +  +  C     + +V+++
Sbjct: 1   MNKGKTVVVGLSGGVDSSVAALLLKEQGWHVVGLFMKNWEDDDTDEYCSSR--QDLVDVL 58

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                   +  ++            +  +   +      PN  V   + I        A 
Sbjct: 59  SVADRIGIDVEVVN---FASQYRERVFAHFLAEYAAGRTPNPDVLCNSEIKFSAFLEHAL 115

Query: 125 RLGITNIVIGVCETDYSGYP-----DCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           ++G   I  G                    T         L  +       PL  L K E
Sbjct: 116 KIGAERIATGHYAGVREFQGAWQLLKAEDGTKDQSYFLHRLNQQQLAKTLFPLAGLYKRE 175

Query: 180 TWKL 183
             K+
Sbjct: 176 VRKM 179


>gi|158521761|ref|YP_001529631.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Desulfococcus oleovorans Hxd3]
 gi|205816872|sp|A9A0S9|MNMA_DESOH RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|158510587|gb|ABW67554.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Desulfococcus oleovorans Hxd3]
          Length = 358

 Score = 55.3 bits (131), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 44/181 (24%), Gaps = 18/181 (9%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +L SGG DS             V  + F  G     E E R    +K+            
Sbjct: 21  VLVSGGIDSLVAAHLLKQSGADVTAIHFLTG----YEPEDRAGRLEKL---------FTQ 67

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
            D  + +     +  S++             PN  +   + I        A  LG   + 
Sbjct: 68  MDIPVFIFDCRTVFQSNVVDYFTAAYLRGETPNPCMVCNSRIKFGACMDYARSLGADAVA 127

Query: 133 IGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            G            R                 L  +       PL  + K +    A   
Sbjct: 128 TGHYCRTTKDPDGVRLWKGADPAKEQSYFLAFLSQDQLGRARFPLERMTKDQVRAHAARH 187

Query: 188 G 188
           G
Sbjct: 188 G 188


>gi|310821277|ref|YP_003953635.1| tRNA-specific 2-thiouridylase mnma [Stigmatella aurantiaca DW4/3-1]
 gi|309394349|gb|ADO71808.1| tRNA-specific 2-thiouridylase MnmA [Stigmatella aurantiaca DW4/3-1]
          Length = 348

 Score = 55.3 bits (131), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 45/182 (24%), Gaps = 7/182 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS   +   ++   V  ++               C    I +     + 
Sbjct: 2   RVVVAMSGGVDSSAAAALLKEQGHEVIGITLRVWSYEGKAQCGSCCSPDDIDDARAVAQK 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                ++   A   +I    +             P   V     +   F    A  LG  
Sbjct: 62  LDIPFYV---ANAEEIFKDRVINPFVQSYLGGRTPIPCVACNRDVKFNFLLKRARALGAQ 118

Query: 130 ----NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
               +      E D                    LG      V  P+  + K E   +A+
Sbjct: 119 LATGHYARVEREGDRHVLRRAVDLAKDQSYFLFTLGQAELADVLFPVGGMTKAEVRAVAE 178

Query: 186 DI 187
             
Sbjct: 179 RH 180


>gi|291240188|ref|XP_002740001.1| PREDICTED: argininosuccinate synthetase 1-like [Saccoglossus
           kowalevskii]
          Length = 414

 Score = 55.3 bits (131), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 38/127 (29%), Gaps = 12/127 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +    + +L +SGG D+S  L W  ++   V     + GQ ++     R    K      
Sbjct: 1   MSDKKTVVLAYSGGLDTSCILVWLKEQGYDVIAFMANLGQVDEDFDAAREKAIK------ 54

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 LG   +  + I  +     +   +       +           +       +A 
Sbjct: 55  ------LGAKKVFIVDIRKEFVEEFIYPGIQANALYEDRYQLGTSFARPVIAREQVRIAK 108

Query: 125 RLGITNI 131
           + G   +
Sbjct: 109 QEGAEYL 115


>gi|33151616|ref|NP_872969.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus ducreyi 35000HP]
 gi|71153355|sp|Q7U342|MNMA_HAEDU RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|33147837|gb|AAP95358.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus ducreyi 35000HP]
          Length = 384

 Score = 55.3 bits (131), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 37/136 (27%), Gaps = 4/136 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
            K    ++  SGG DSS        +  +VE L     + +     C       + +   
Sbjct: 22  NKNKKVIIGMSGGVDSSVSAFILQQQGYQVEGLFMKNWEEDDDTDYC--TAAADLADAQN 79

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  + H +      +   +     +A            +  + I F  F    A  
Sbjct: 80  VADRLGIKLHKIN--FAAEYWDNVFEHFLAEYQAGRTPNPDILCNKEIKFKAFLEYAAED 137

Query: 126 LGITNIVIGVCETDYS 141
           LG   I  G      +
Sbjct: 138 LGADYIATGHYVRRSA 153


>gi|301605226|ref|XP_002932238.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 [Xenopus
           (Silurana) tropicalis]
          Length = 418

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 33/118 (27%), Gaps = 9/118 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--------QRNKVELECRLCV 56
           ++     +   SGG DSS        R   V  +  +             + + E    V
Sbjct: 1   MQTVRRVVCAMSGGVDSSVAALLLRRRGYEVTGVFMNNWDAVDEHGVCSAERDCEDAYRV 60

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            KK+     +        H +    L +      T N  +    +   N F+     I
Sbjct: 61  CKKLDIPFHQVSYVKEYWHEVFSYFLNEYEKG-RTPNPDILCNKHIKFNHFLSYAIDI 117


>gi|167751458|ref|ZP_02423585.1| hypothetical protein EUBSIR_02454 [Eubacterium siraeum DSM 15702]
 gi|167655704|gb|EDR99833.1| hypothetical protein EUBSIR_02454 [Eubacterium siraeum DSM 15702]
          Length = 358

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 34/134 (25%), Gaps = 5/134 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY--GQRNKVELECRLCVRKKIVELM 64
               A++  SGG DSS        R      ++      +   +  E   C    + +  
Sbjct: 1   MNNKAVIAMSGGVDSSVAAYLMKQRGFDCIGVTMKLFANEDIGISREHSCCSLDDVEDAR 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     ++       D   + +        ++   PN  +     +        A 
Sbjct: 61  SVAYSLDMPYYVFN---FSDRFETDVIDRFINAYENGITPNPCIDCNRYLKFDKLYMRAK 117

Query: 125 RLGITNIVIGVCET 138
            L    +V G    
Sbjct: 118 ELDRDYVVTGHYAR 131


>gi|34785183|gb|AAH56730.1| Guanine monphosphate synthetase [Danio rerio]
 gi|220672807|emb|CAX14206.1| guanine monphosphate synthetase [Danio rerio]
          Length = 359

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 2/63 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               L+L SGG DS+ C +        ++V  +  D G   K E +       K+   + 
Sbjct: 235 KSKVLVLLSGGVDSTVCTALLNKALNQEQVIAVHIDNGFMRKRESQSVEEALTKLGIKLK 294

Query: 66  KWK 68
              
Sbjct: 295 VVN 297


>gi|99081242|ref|YP_613396.1| tRNA-specific 2-thiouridylase MnmA [Ruegeria sp. TM1040]
 gi|123077645|sp|Q1GGT2|MNMA_SILST RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|99037522|gb|ABF64134.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ruegeria sp. TM1040]
          Length = 381

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/184 (11%), Positives = 48/184 (26%), Gaps = 6/184 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   ++  D+   V  ++   Y     +  +   C    I +     +
Sbjct: 22  RVVVAMSGGVDSSVVAAYLADQGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDARRVAE 81

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +     ++L    +   +      +  +                   L+  A        
Sbjct: 82  ERGFPHYVLDYENIFKDAVIDEFADSYLAGATPVPCIRCNERVKFKDLLETAKDLEA-DC 140

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL----KKYETWKLA 184
                 +        P+         + +  L   +   +      L     K  T ++A
Sbjct: 141 MATGHYIQRKMGEHGPELHSAEDANRDQSYFLFSTTPEQLDFLRFPLGHLPSKDATREMA 200

Query: 185 QDIG 188
              G
Sbjct: 201 AQYG 204


>gi|332535582|ref|ZP_08411352.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035000|gb|EGI71520.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 366

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 52/191 (27%), Gaps = 11/191 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M++        ++  SGG DSS        +  +VE L     + +  +  C       +
Sbjct: 1   MSE--NSHIKVIVGMSGGVDSSVSAYLLQQQGYQVEGLFMKNWEEDDNDEYCA--AADDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +A            +  + I F  F  
Sbjct: 57  KDAQAVCDKLGIELHTVN--FAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G                              L  E       P+  +
Sbjct: 115 FAAQALGADFIATGHYVRRELRDDKYVMCRGLDNNKDQSYFLYTLSHEHIGQTLFPVGDI 174

Query: 176 KKYETWKLAQD 186
           +K E  ++A++
Sbjct: 175 EKPEVRRIAEE 185


>gi|308048596|ref|YP_003912162.1| (ThiS-adenylate) sulfurtransferase [Ferrimonas balearica DSM 9799]
 gi|307630786|gb|ADN75088.1| (ThiS-adenylate) sulfurtransferase [Ferrimonas balearica DSM 9799]
          Length = 484

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 54/185 (29%), Gaps = 25/185 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS      A+ R  R     F+ G              + + E+     + 
Sbjct: 182 VLSLISGGFDSGVSTYQAIKRGTRTHYCFFNLGG---------AEHERGVKEVAYYLWNK 232

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +          S   + V  +I +             + +  AA +A R  I  
Sbjct: 233 FGSSHRVRFI-------SVPFEPVVEEILERVDNGQMGVVLKRMMMKVAAEVAARFDIPA 285

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S       + I      +         +  PL+   K E    A+ IG  
Sbjct: 286 LVTGEAMGQVSSQTLTNLNVIDRATDTV---------ILRPLITWDKQEIVDTARAIGTA 336

Query: 191 DLVNL 195
               +
Sbjct: 337 PFAEV 341


>gi|148642250|ref|YP_001272763.1| ATPase [Methanobrevibacter smithii ATCC 35061]
 gi|222444577|ref|ZP_03607092.1| hypothetical protein METSMIALI_00189 [Methanobrevibacter smithii
           DSM 2375]
 gi|148551267|gb|ABQ86395.1| predicted ATPase [Methanobrevibacter smithii ATCC 35061]
 gi|222434142|gb|EEE41307.1| hypothetical protein METSMIALI_00189 [Methanobrevibacter smithii
           DSM 2375]
          Length = 343

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 66/212 (31%), Gaps = 11/212 (5%)

Query: 2   NDIIKKAPS--ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           +++ K++    A++  SGG DSS  L  A         ++ D G    +         KK
Sbjct: 132 SNVFKESEKTEAVVALSGGVDSSFSLILAKYLGFNPTAVTIDPG--TIILPNQYKRNIKK 189

Query: 60  IVELMPKWKDSLGEDHI-LPLAILGDISH----SSLTKNVAMKIQDNNLPNTFVPGRNII 114
           + + +    + +  D+  +    L    H     S      +     N     V   +++
Sbjct: 190 LTDQLNAGHEYIKADYSEIIRESLNGRFHPCGRCSKHTEELINQYAINNNIPIVIFGDML 249

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
                       G+  +             +        +++    G      VH    +
Sbjct: 250 STGTQCITPQEKGLYRL-NLPASLAVGKQENKSLTQQFDLQSFSGFGCPLLYEVHRKYPY 308

Query: 175 LKKYETWKLAQDIGGQDL-VNLILEESHTCYL 205
           LKKY   ++ ++     L V   L+   + Y 
Sbjct: 309 LKKYSIQRILRETRSSALEVGEALDLIWSFYN 340


>gi|258646059|ref|ZP_05733528.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Dialister invisus DSM 15470]
 gi|260403430|gb|EEW96977.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Dialister invisus DSM 15470]
          Length = 350

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 20/186 (10%), Positives = 49/186 (26%), Gaps = 7/186 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + +    ++  SGG DS+       +    V   + +  Q +  ++     +   +    
Sbjct: 1   MTEKKKVVVAMSGGVDSTLTARLLQEAGYDVYGATMN--QFDGQDMTEAQKIADFLGIPH 58

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                      I+    L     S             +    F    + +   F      
Sbjct: 59  KVIDVRKMYQDIV----LSYFVDSYKNGITPNPCMMCDFKIKFGFFYDTVRAFFDCPYFA 114

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                 I        Y           ++     +L  +    +  PL  + K +T +++
Sbjct: 115 TGHYARITYDGTRRKYQVEKATDLAKDQSYM-MYHLTQDQLAHILFPLGRIYKKDTRRIS 173

Query: 185 QDIGGQ 190
           ++ G  
Sbjct: 174 EEKGLP 179


>gi|167854751|ref|ZP_02477530.1| thiamine biosynthesis protein ThiI [Haemophilus parasuis 29755]
 gi|167854165|gb|EDS25400.1| thiamine biosynthesis protein ThiI [Haemophilus parasuis 29755]
          Length = 483

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 53/182 (29%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W   
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------AAHGIGVKQMAY-HIWSRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + + V        L    V   + I        A R  I  
Sbjct: 232 SSSHKVRFVAINFENVVGEILEKVDNGQMGVVLKRMMVRAASKI--------AERFDIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I      +         V  PL+   K +   +A++IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDKTSDTL---------VLRPLITHDKEQIIAMAKEIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|323497848|ref|ZP_08102859.1| tRNA-specific 2-thiouridylase MnmA [Vibrio sinaloensis DSM 21326]
 gi|323317076|gb|EGA70076.1| tRNA-specific 2-thiouridylase MnmA [Vibrio sinaloensis DSM 21326]
          Length = 369

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 38/140 (27%), Gaps = 6/140 (4%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +VE L     + +  E  C     + +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYC--TAAEDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +            H +      +   +     +A            +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIHLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDY 140
                L    I +G      
Sbjct: 115 FADEVLDADYIAMGHYVRRT 134


>gi|261493743|ref|ZP_05990260.1| thiamine biosynthesis protein ThiI [Mannheimia haemolytica serotype
           A2 str. BOVINE]
 gi|261496157|ref|ZP_05992564.1| thiamine biosynthesis protein ThiI [Mannheimia haemolytica serotype
           A2 str. OVINE]
 gi|261308189|gb|EEY09485.1| thiamine biosynthesis protein ThiI [Mannheimia haemolytica serotype
           A2 str. OVINE]
 gi|261310588|gb|EEY11774.1| thiamine biosynthesis protein ThiI [Mannheimia haemolytica serotype
           A2 str. BOVINE]
          Length = 483

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 52/182 (28%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W   
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWSRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + + V        L    V   + I        A R  I  
Sbjct: 232 STSHKVRFIAINFENVVGEILEKVDNGQMGVVLKRMMVRAASRI--------AERFDIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I      +         V  PL+   K +   +A+ IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDKASDTL---------VLRPLITHDKEQIIAMAKAIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|254361917|ref|ZP_04978050.1| thiamine biosynthesis protein ThiI [Mannheimia haemolytica PHL213]
 gi|153093458|gb|EDN74446.1| thiamine biosynthesis protein ThiI [Mannheimia haemolytica PHL213]
          Length = 483

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 52/182 (28%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W   
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWSRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + + V        L    V   + I        A R  I  
Sbjct: 232 STSHKVRFIAINFENVVGEILEKVDNGQMGVVLKRMMVRAASRI--------AERFDIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I      +         V  PL+   K +   +A+ IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDKASDTL---------VLRPLITHDKEQIIAMAKAIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|281411738|ref|YP_003345817.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermotoga naphthophila RKU-10]
 gi|281372841|gb|ADA66403.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermotoga naphthophila RKU-10]
          Length = 358

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 47/189 (24%), Gaps = 18/189 (9%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI-------VELMP 65
           +  SGG DS+  L   L     V+          + E   R  ++KK+        + M 
Sbjct: 5   VALSGGVDSAVALYLLLKEGHEVKAFHMKTK---EDEFFIRKEIKKKVCCSPSDTADAMR 61

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKN------VAMKIQDNNLPNTFVPGRNIIFLVFA 119
                  E  I+ +  +         K               N    F    + +     
Sbjct: 62  IAHFLGVEIEIVDVKEIFREKVIEPFKRDLLKGLTPNPCAHCNRFVKFGYLMDYVLNQGF 121

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
              A       I                    ++   A          +    ++  K E
Sbjct: 122 DAFASGHYAR-IEFSEKYGRKVIKKGVDLKKDQSYFLARIEPWRIERLIFPNGIY-TKEE 179

Query: 180 TWKLAQDIG 188
             K+A++ G
Sbjct: 180 IRKIAEEAG 188


>gi|288869783|ref|ZP_05976300.2| conserved hypothetical protein [Methanobrevibacter smithii DSM
           2374]
 gi|288860221|gb|EFC92519.1| conserved hypothetical protein [Methanobrevibacter smithii DSM
           2374]
          Length = 343

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 66/212 (31%), Gaps = 11/212 (5%)

Query: 2   NDIIKKAPS--ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           +++ K++    A++  SGG DSS  L  A         ++ D G    +         KK
Sbjct: 132 SNVFKESEKTEAVVALSGGVDSSFSLILAKYLGFNPTAVTIDPG--TIILPNQYKRNIKK 189

Query: 60  IVELMPKWKDSLGEDHI-LPLAILGDISH----SSLTKNVAMKIQDNNLPNTFVPGRNII 114
           + + +    + +  D+  +    L    H     S      +     N     V   +++
Sbjct: 190 LTDQLNADHEYIKADYSEIIRESLNGRFHPCGRCSKHTEELINQYAINKDIPIVIFGDML 249

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
                       G+  +             +        +++    G      VH    +
Sbjct: 250 STGTQCITPQEKGLYRL-NLPASLAVGKQENKSLTQQFDLQSFSGFGCPLLYEVHRKYPY 308

Query: 175 LKKYETWKLAQDIGGQDL-VNLILEESHTCYL 205
           LKKY   ++ ++     L V   L+   + Y 
Sbjct: 309 LKKYSIQRILRETRSSALEVGEALDLIWSFYN 340


>gi|167553799|ref|ZP_02347544.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|205321840|gb|EDZ09679.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
          Length = 368

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 53/190 (27%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +     ++  SGG DSS           +VE L     + +  E  C       + + 
Sbjct: 1   MSESPKKVIVGMSGGVDSSVSAWLLQQLGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +             +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 LG E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRADVNGKSRLLRGLDGNKDQSYFLYTLGHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 177 QVRKIAEDLG 186


>gi|159028008|emb|CAO87968.1| trmU [Microcystis aeruginosa PCC 7806]
          Length = 352

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 52/187 (27%), Gaps = 17/187 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS   +    +   V  L+        +      C  + +V+     + 
Sbjct: 3   KVVVGLSGGVDSSVAAAALHAQGYDVIGLTL------WLMKGKGQCCSEGMVDAAFICEQ 56

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA-YRLGI 128
                HI+    L          +     +    P         +        A   L  
Sbjct: 57  LGVPHHIVDSRELFQKEIIDYLVS---GYEAGITPLPCSQCNKAVKFSPMLHYARETLET 113

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL-------KKYETW 181
             I  G          + R+  +RA++   +     +      L           K ET 
Sbjct: 114 DTIATGHYARIRFSPENNRYQLMRAVDKNKDQSYFLYDLTQDVLRGTLFPLGEQTKAETR 173

Query: 182 KLAQDIG 188
           ++AQ+ G
Sbjct: 174 RIAQEFG 180


>gi|197119634|ref|YP_002140061.1| tRNA-specific 2-thiouridylase MnmA [Geobacter bemidjiensis Bem]
 gi|197088994|gb|ACH40265.1| tRNA (5-carboxymethylaminomethyl-2-thio-U34)-thioltransferase
           [Geobacter bemidjiensis Bem]
          Length = 355

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 55/214 (25%), Gaps = 14/214 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC---RLCVR 57
           M+   K    A+ + SGG DSST  +   ++   V  ++     R+  + +       V 
Sbjct: 1   MSGNFKGKKVAVAM-SGGVDSSTVAALLKEQGAEVIGINMKLFARDGEDPQAKGDAQIVA 59

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           + +               ++                           N +V    ++   
Sbjct: 60  EYLGIEFHLVHLEEQFSRLIMEDFRAQYLGGETPNP-------CVRCNRYVKFGLLLDKA 112

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL-K 176
                 Y      +     +                      L  +    V  PL  +  
Sbjct: 113 LELGAEYLATGHYVRTSRDDGGSYHLLKAAFLAKDQSYFLYTLTQKQLSHVVFPLGDMPS 172

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDK 210
           K E  +LA+  G         +E   C++   D 
Sbjct: 173 KDEVRRLAEKFGLPVAQKSDSQEI--CFVPGDDY 204


>gi|119486285|ref|ZP_01620344.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lyngbya sp. PCC 8106]
 gi|119456498|gb|EAW37628.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lyngbya sp. PCC 8106]
          Length = 352

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 46/158 (29%), Gaps = 10/158 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS   +    +   V  L+        +      C  + +V+     +
Sbjct: 2   KKVVVGLSGGVDSSAAAAILHHQDYEVVGLTL------WLMKGKGQCCSEGMVDAAFICE 55

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA-YRLG 127
                 HI+    L     + +   +         P         +        A   LG
Sbjct: 56  QLGVPHHIVDSRELFQ---THIVDYLVEGYSAGITPLPCSQCNKTVKFGPMLRHAKEELG 112

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH 165
           I  I  G          + R+  +RA++ + +     +
Sbjct: 113 IDLIATGHYARIRYDEQNNRYQLLRAVDKSKDQSYFLY 150


>gi|77463173|ref|YP_352677.1| tRNA-specific 2-thiouridylase MnmA [Rhodobacter sphaeroides 2.4.1]
 gi|123592152|sp|Q3J358|MNMA_RHOS4 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|77387591|gb|ABA78776.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhodobacter sphaeroides 2.4.1]
          Length = 379

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 47/188 (25%), Gaps = 10/188 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +        V  ++   Y     +  +   C  + I +     +
Sbjct: 19  RVVVAMSGGVDSSVVAAELAAEGYDVVGVTLQLYDHGAALAKKGACCAGRDIHDARRVAE 78

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL-- 126
                 ++L           ++    A        P   +     +        A  L  
Sbjct: 79  TMGFPHYVLDYEN---TFREAVIDEFADAYLAGATPVPCIRCNERVKFKDLLQTAKDLDA 135

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL----KKYETWK 182
                   +        P+       A + +  L   +   +      L     K ET  
Sbjct: 136 DCMATGHYIQRKMGPAGPELHSAADPARDQSYFLFSTTPEQLAFLRFPLGHLASKAETRA 195

Query: 183 LAQDIGGQ 190
           LA   G  
Sbjct: 196 LAARHGLP 203


>gi|269955513|ref|YP_003325302.1| GMP synthase large subunit [Xylanimonas cellulosilytica DSM 15894]
 gi|269304194|gb|ACZ29744.1| GMP synthase, large subunit [Xylanimonas cellulosilytica DSM 15894]
          Length = 524

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 56/185 (30%), Gaps = 11/185 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +       D++  +  D+G          L    ++ ++   + 
Sbjct: 221 RVICALSGGVDSAVAAALVQKAVGDQLTCVHVDHG----------LMRAGEVEQIERDFV 270

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            S G   I+       ++  +   +   K +        V       ++  A  A     
Sbjct: 271 ASTGVRLIVRDEKERFLTALAGVTDPETKRKIIGREFIRVFEDAQRQIIKDAGEAGEDVK 330

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +    +  PL  L K E   + +++G
Sbjct: 331 FLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPDDLQFELVEPLRALFKDEVRAVGRELG 390

Query: 189 GQDLV 193
             + +
Sbjct: 391 IPEEI 395


>gi|170768217|ref|ZP_02902670.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia albertii TW07627]
 gi|170122983|gb|EDS91914.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia albertii TW07627]
          Length = 368

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRADVNGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 177 QVRKIAEDLG 186


>gi|113954939|ref|YP_729285.1| GMP synthase [Synechococcus sp. CC9311]
 gi|123031950|sp|Q0IE37|GUAA_SYNS3 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|113882290|gb|ABI47248.1| GMP synthase, glutamine-hydrolyzing [Synechococcus sp. CC9311]
          Length = 528

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 51/191 (26%), Gaps = 19/191 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSST          D++  +  D G   K E E               
Sbjct: 224 QKRVLLALSGGVDSSTLAFLLKKAIGDQLTCMFIDQGFMRKGEPEF-------------- 269

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +       + +  +          +     ++          R              L
Sbjct: 270 LMEFFDRKFNIHVEYINARERFIKKLDGITDPEEKRKIIGTEFIRVFEEESRRLGPFDYL 329

Query: 127 GITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
               +   V E+  +       +     I++      L  +    +  PL  L K E  K
Sbjct: 330 VQGTLYPDVIESAGTNVDPKTGERVAVKIKSHHNVGGLPKDLRFKLVEPLRKLFKDEVRK 389

Query: 183 LAQDIGGQDLV 193
           + + +G  + +
Sbjct: 390 VGRTLGLPEEI 400


>gi|254465357|ref|ZP_05078768.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhodobacterales bacterium Y4I]
 gi|206686265|gb|EDZ46747.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhodobacterales bacterium Y4I]
          Length = 381

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/184 (11%), Positives = 48/184 (26%), Gaps = 6/184 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   ++  D+   V  ++   Y     +  +   C    I +     +
Sbjct: 22  RVVVAMSGGVDSSVVAAYLADQGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDARRVAE 81

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +     ++L    +   +      +  +                   L+  A        
Sbjct: 82  ERGFPHYVLDYENIFKDAVIDEFADSYLAGATPVPCIRCNERVKFKDLLETAKDLEA-DC 140

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL----KKYETWKLA 184
                 +        P+         + +  L   +   +      L     K  T ++A
Sbjct: 141 MATGHYIQRKMGPNGPELHSAEDANRDQSYFLFSTTPEQLDYLRFPLGHLPSKDATREMA 200

Query: 185 QDIG 188
              G
Sbjct: 201 AQYG 204


>gi|160940314|ref|ZP_02087659.1| hypothetical protein CLOBOL_05203 [Clostridium bolteae ATCC
           BAA-613]
 gi|158436894|gb|EDP14661.1| hypothetical protein CLOBOL_05203 [Clostridium bolteae ATCC
           BAA-613]
          Length = 351

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/182 (12%), Positives = 47/182 (25%), Gaps = 6/182 (3%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS       ++   V  ++    Q    E++        +  +    + ++   
Sbjct: 1   MSGGVDSSVAAWLLKEQGYDVIGVTMQIWQDEDTEVQEAEGGCCGLSAVDDARRVAMDLG 60

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
               +    +    ++      +  +   PN  +     +        +  +G   I  G
Sbjct: 61  IPYYVMNFKEEFRKNVMDYFVGEYVEGRTPNPCIACNRHVKWESLLRRSMAIGADYIATG 120

Query: 135 VCE------TDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                                         NL  E       P+    K E   +A+ +G
Sbjct: 121 HYAQIDRLPGGRYSLKTSVTAAKDQTYALYNLTQEQLSHTLMPVGSYHKEEIRDMAKRLG 180

Query: 189 GQ 190
             
Sbjct: 181 LP 182


>gi|167745698|ref|ZP_02417825.1| hypothetical protein ANACAC_00390 [Anaerostipes caccae DSM 14662]
 gi|167655010|gb|EDR99139.1| hypothetical protein ANACAC_00390 [Anaerostipes caccae DSM 14662]
          Length = 356

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 46/187 (24%), Gaps = 6/187 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS       ++   V  ++    Q  + EL         +  +   
Sbjct: 1   MKEKVVVGMSGGVDSSVAAYLLKEQGYEVIGVTMQIWQDEEQELLEENGGCCGLSAVDDA 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            + +   D    +          +      +  D   PN  +     +        +  +
Sbjct: 61  RRVAQALDIPYYVMNFKQDFKEHVIDYFIDEYLDGRTPNPCIACNRYVKWESLLKRSLDI 120

Query: 127 GITNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           G   I  G                              NL          P+    K E 
Sbjct: 121 GADYIATGHYARIEKLSNGRYALKRSATPEKDQTYALYNLTQNQLSKTLMPVGEYTKDEI 180

Query: 181 WKLAQDI 187
            ++A+ I
Sbjct: 181 REIAEKI 187


>gi|148980425|ref|ZP_01816047.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrionales bacterium SWAT-3]
 gi|145961228|gb|EDK26541.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrionales bacterium SWAT-3]
          Length = 378

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 39/142 (27%), Gaps = 6/142 (4%)

Query: 1   MNDIIK--KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           M+DI         ++  SGG DSS        +  +VE L     + +  E  C     +
Sbjct: 1   MSDISSGNSEKKVIVGMSGGVDSSVSAYLLQQQGYQVEGLFMKNWEEDDNEEYC--TAAE 58

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
            + +            H +      +   +     +A            +  + I F  F
Sbjct: 59  DLADAQAVCDKLGIHLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAF 116

Query: 119 AATLAYRLGITNIVIGVCETDY 140
                  L    I +G      
Sbjct: 117 LEFADEVLDADYIAMGHYVRRT 138


>gi|84995316|ref|XP_952380.1| trna methyl transferase [Theileria annulata strain Ankara]
 gi|65302541|emb|CAI74648.1| trna methyl transferase, putative [Theileria annulata]
          Length = 1070

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 40/168 (23%), Gaps = 8/168 (4%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC-------R 53
           M    +      +L SGG DSS  L     R   V+         +     C        
Sbjct: 289 MFQSPRSKKRVAVLVSGGVDSSLALWIMKSRGFDVQAFHLKVNDLSNGPGLCSSNDISYA 348

Query: 54  LCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
           + V   +   +     S   D  +   +L D     +  N  +          F+     
Sbjct: 349 MEVCNILRVTLHVLPFSQVYDKHILSDVLDDYRKGEVP-NPDILCNSRIKFGEFLKMATD 407

Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
               + AT  Y     +          S    C           + L 
Sbjct: 408 WGFDYVATGHYATLCDDFFTKEQIKSPSYLDGCTSINGYYRIKRLCLS 455


>gi|227886510|ref|ZP_04004315.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli 83972]
 gi|300975599|ref|ZP_07173078.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 45-1]
 gi|301051077|ref|ZP_07197911.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 185-1]
 gi|227836714|gb|EEJ47180.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli 83972]
 gi|300297249|gb|EFJ53634.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 185-1]
 gi|300410262|gb|EFJ93800.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 45-1]
 gi|315293099|gb|EFU52451.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 153-1]
          Length = 383

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 16  MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 73

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 74  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 131

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 132 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 191

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 192 QVRKIAEDLG 201


>gi|119475106|ref|ZP_01615459.1| thiamine biosynthesis protein ThiI [marine gamma proteobacterium
           HTCC2143]
 gi|119451309|gb|EAW32542.1| thiamine biosynthesis protein ThiI [marine gamma proteobacterium
           HTCC2143]
          Length = 448

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 60/185 (32%), Gaps = 27/185 (14%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKW 67
            SA+ L SGG DS+      + R  R     F+ G R ++V           + E+    
Sbjct: 144 ESAVSLISGGFDSTVSTYMTMKRGMRTHFCFFNLGGRDHEVG----------VKEIALYL 193

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    +          S   ++V  +I  N   +        + L     +A  L 
Sbjct: 194 WMKYGASSRVKF-------VSVPFEDVVAEILKNVDDSQMGVVLKRMMLRAGTEVAKNLR 246

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      S         I ++   +         V  PL+   K +  ++A++I
Sbjct: 247 GQALVTGEAVAQVSSQTLTNLSVIDSVTETL---------VLRPLIVSDKEDIIRIAREI 297

Query: 188 GGQDL 192
           G +  
Sbjct: 298 GTEKF 302


>gi|91210289|ref|YP_540275.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli UTI89]
 gi|117623318|ref|YP_852231.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli APEC O1]
 gi|237706881|ref|ZP_04537362.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia sp. 3_2_53FAA]
 gi|300982382|ref|ZP_07176080.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 200-1]
 gi|91071863|gb|ABE06744.1| probable ATPase YcfB [Escherichia coli UTI89]
 gi|115512442|gb|ABJ00517.1| putative ATPase [Escherichia coli APEC O1]
 gi|226898091|gb|EEH84350.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia sp. 3_2_53FAA]
 gi|300307219|gb|EFJ61739.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 200-1]
 gi|315287470|gb|EFU46881.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 110-3]
 gi|315296602|gb|EFU55897.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 16-3]
 gi|324013226|gb|EGB82445.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 60-1]
          Length = 383

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 16  MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 73

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 74  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 131

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 132 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 191

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 192 QVRKIAEDLG 201


>gi|260906013|ref|ZP_05914335.1| GMP synthase [Brevibacterium linens BL2]
          Length = 526

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 57/187 (30%), Gaps = 11/187 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DSS   +       D++  +  D+G   + E E          ++   
Sbjct: 221 SKKVICALSGGVDSSVAAALVHKAIGDQLTCVFVDHGLLRENERE----------QVEND 270

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           + DS+G   +   A    +S  +   +   K +                LV  A      
Sbjct: 271 YVDSIGVRLVTIDARERFLSELAGVTDPETKRKIIGREFIRTFESASADLVAEAKDEGEE 330

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +               I++      L  +    +  PL  L K E   + ++
Sbjct: 331 IGFLVQGTLYPDVVESGGGSGTANIKSHHNVGGLPDDITFELIEPLRALFKDEVRAIGRE 390

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 391 LGVPEAI 397


>gi|85860332|ref|YP_462534.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Syntrophus aciditrophicus SB]
 gi|123517346|sp|Q2LWA6|MNMA1_SYNAS RecName: Full=tRNA-specific 2-thiouridylase mnmA 1
 gi|85723423|gb|ABC78366.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Syntrophus aciditrophicus SB]
          Length = 372

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 55/184 (29%), Gaps = 9/184 (4%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               LL  SGG DSS       +    V  ++   G R + E + R C R+ I +     
Sbjct: 20  KKRVLLAISGGVDSSVAALLLKEEGYEVAGVTMCLGVR-EEENKVRCCGREAIEDARGVC 78

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +      ++L  A L     + +      + +    PN  +     +        A  +G
Sbjct: 79  EILGIPHYVLDYAPL---LETCVIDKFVREYRLGRTPNPCIDCNRYLKFGHLLDSARTMG 135

Query: 128 ITNIVIGVCETDYS-----GYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              +  G                 +            + + +   +  PL    K E  +
Sbjct: 136 FDYLATGHYAKIERKESRWILKKAKDLVKDQTYFLYPIPVAALEHILFPLADRTKDEVRE 195

Query: 183 LAQD 186
           +A+ 
Sbjct: 196 IARQ 199


>gi|333004970|gb|EGK24490.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shigella flexneri VA-6]
          Length = 368

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 177 QVRKIAEDLG 186


>gi|24051447|gb|AAN42769.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|30040928|gb|AAP16658.1| hypothetical protein S1235 [Shigella flexneri 2a str. 2457T]
 gi|281600566|gb|ADA73550.1| putative tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase, contains the PP-loop ATPase domain
           [Shigella flexneri 2002017]
          Length = 383

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 16  MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 73

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 74  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 131

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 132 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 191

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 192 QVRKIAEDLG 201


>gi|12514787|gb|AAG55959.1|AE005329_3 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
 gi|13361069|dbj|BAB35028.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|209772838|gb|ACI84731.1| hypothetical protein ECs1605 [Escherichia coli]
 gi|209772840|gb|ACI84732.1| hypothetical protein ECs1605 [Escherichia coli]
 gi|209772842|gb|ACI84733.1| hypothetical protein ECs1605 [Escherichia coli]
 gi|209772844|gb|ACI84734.1| hypothetical protein ECs1605 [Escherichia coli]
 gi|209772846|gb|ACI84735.1| hypothetical protein ECs1605 [Escherichia coli]
          Length = 383

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 16  MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 73

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 74  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 131

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 132 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 191

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 192 QVRKIAEDLG 201


>gi|324005950|gb|EGB75169.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 57-2]
          Length = 383

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 16  MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 73

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 74  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 131

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 132 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 191

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 192 QVRKIAEDLG 201


>gi|293404489|ref|ZP_06648483.1| trmU [Escherichia coli FVEC1412]
 gi|298380264|ref|ZP_06989869.1| tRNA-specific 2-thiouridylase mnmA [Escherichia coli FVEC1302]
 gi|300896838|ref|ZP_07115333.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 198-1]
 gi|300938705|ref|ZP_07153429.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 21-1]
 gi|301024581|ref|ZP_07188253.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 69-1]
 gi|331646392|ref|ZP_08347495.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli M605]
 gi|281178243|dbj|BAI54573.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Escherichia coli SE15]
 gi|291429075|gb|EFF02100.1| trmU [Escherichia coli FVEC1412]
 gi|298279962|gb|EFI21470.1| tRNA-specific 2-thiouridylase mnmA [Escherichia coli FVEC1302]
 gi|300359320|gb|EFJ75190.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 198-1]
 gi|300396506|gb|EFJ80044.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 69-1]
 gi|300456350|gb|EFK19843.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 21-1]
 gi|331045144|gb|EGI17271.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli M605]
          Length = 383

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 16  MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 73

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 74  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 131

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 132 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 191

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 192 QVRKIAEDLG 201


>gi|215486387|ref|YP_002328818.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli O127:H6 str.
           E2348/69]
 gi|215264459|emb|CAS08822.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli O127:H6 str. E2348/69]
          Length = 368

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 177 QVRKIAEDLG 186


>gi|300816836|ref|ZP_07097056.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 107-1]
 gi|300821083|ref|ZP_07101232.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 119-7]
 gi|300906948|ref|ZP_07124620.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 84-1]
 gi|300917906|ref|ZP_07134539.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 115-1]
 gi|300922663|ref|ZP_07138760.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 182-1]
 gi|300928309|ref|ZP_07143845.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 187-1]
 gi|300949484|ref|ZP_07163481.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 116-1]
 gi|300955539|ref|ZP_07167901.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 175-1]
 gi|301306077|ref|ZP_07212155.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 124-1]
 gi|301328492|ref|ZP_07221558.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 78-1]
 gi|301644551|ref|ZP_07244544.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 146-1]
 gi|309796520|ref|ZP_07690927.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 145-7]
 gi|331641677|ref|ZP_08342812.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli H736]
 gi|331652184|ref|ZP_08353203.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli M718]
 gi|331676926|ref|ZP_08377622.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli H591]
 gi|332279679|ref|ZP_08392092.1| conserved hypothetical protein [Shigella sp. D9]
 gi|300317578|gb|EFJ67362.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 175-1]
 gi|300401295|gb|EFJ84833.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 84-1]
 gi|300414896|gb|EFJ98206.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 115-1]
 gi|300421012|gb|EFK04323.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 182-1]
 gi|300451104|gb|EFK14724.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 116-1]
 gi|300463695|gb|EFK27188.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 187-1]
 gi|300526382|gb|EFK47451.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 119-7]
 gi|300530610|gb|EFK51672.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 107-1]
 gi|300838649|gb|EFK66409.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 124-1]
 gi|300845099|gb|EFK72859.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 78-1]
 gi|301077133|gb|EFK91939.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 146-1]
 gi|308119832|gb|EFO57094.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 145-7]
 gi|315135765|dbj|BAJ42924.1| trmU [Escherichia coli DH1]
 gi|315254893|gb|EFU34861.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 85-1]
 gi|324017533|gb|EGB86752.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 117-3]
 gi|331038475|gb|EGI10695.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli H736]
 gi|331050462|gb|EGI22520.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli M718]
 gi|331075615|gb|EGI46913.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli H591]
 gi|332102031|gb|EGJ05377.1| conserved hypothetical protein [Shigella sp. D9]
          Length = 383

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 16  MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 73

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 74  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 131

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 132 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 191

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 192 QVRKIAEDLG 201


>gi|81245791|gb|ABB66499.1| conserved hypothetical protein [Shigella boydii Sb227]
          Length = 383

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 16  MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 73

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 74  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 131

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 132 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 191

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 192 QVRKIAEDLG 201


>gi|56752503|ref|YP_173204.1| tRNA-specific 2-thiouridylase MnmA [Synechococcus elongatus PCC
           6301]
 gi|81300318|ref|YP_400526.1| tRNA-specific 2-thiouridylase MnmA [Synechococcus elongatus PCC
           7942]
 gi|81561195|sp|Q5MZ36|MNMA_SYNP6 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|123556790|sp|Q31N30|MNMA_SYNE7 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|56687462|dbj|BAD80684.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Synechococcus elongatus PCC 6301]
 gi|81169199|gb|ABB57539.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Synechococcus elongatus PCC 7942]
          Length = 357

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 17/188 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS   +    +   VE L+        +      C  + +V+     +
Sbjct: 2   ERVVVGLSGGVDSSVAAALLHRQGYAVEGLTL------WLMKGKGQCCSEGMVDAAGICE 55

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY-RLG 127
                 H++           ++   V    +    P         +        A   L 
Sbjct: 56  QMGVPYHVVDSRD---RFQEAIVDYVVQGYEAGITPLPCSQCNRAVKFGPMLDYAKTELK 112

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-------VTVHTPLMWLKKYET 180
              I  G            R + +RA++   +     +        +V  PL  L K ET
Sbjct: 113 ADAIATGHYARLRQNPETGRTELLRAVDRNKDQTYFLYDLPQSVLQSVKFPLGELTKPET 172

Query: 181 WKLAQDIG 188
            ++A ++G
Sbjct: 173 RQIAAELG 180


>gi|110641310|ref|YP_669040.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli 536]
 gi|191173062|ref|ZP_03034595.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli F11]
 gi|218558015|ref|YP_002390928.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli S88]
 gi|218689086|ref|YP_002397298.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli ED1a]
 gi|306814017|ref|ZP_07448190.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli NC101]
 gi|331657197|ref|ZP_08358159.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli TA206]
 gi|123344119|sp|Q0TIU0|MNMA_ECOL5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205822319|sp|A1AA27|MNMA_ECOK1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205822366|sp|Q1RD20|MNMA_ECOUT RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|110342902|gb|ABG69139.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli 536]
 gi|190906607|gb|EDV66213.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli F11]
 gi|218364784|emb|CAR02474.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli S88]
 gi|218426650|emb|CAR07478.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli ED1a]
 gi|294491197|gb|ADE89953.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli IHE3034]
 gi|305852654|gb|EFM53102.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli NC101]
 gi|307627395|gb|ADN71699.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli UM146]
 gi|323187621|gb|EFZ72928.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli RN587/1]
 gi|323953180|gb|EGB49046.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli H252]
 gi|323957959|gb|EGB53671.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli H263]
 gi|331055445|gb|EGI27454.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli TA206]
          Length = 368

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 177 QVRKIAEDLG 186


>gi|307553134|gb|ADN45909.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli ABU 83972]
          Length = 368

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 177 QVRKIAEDLG 186


>gi|222032885|emb|CAP75625.1| hypothetical protein LF82_1359 [Escherichia coli LF82]
 gi|312945695|gb|ADR26522.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli O83:H1 str.
           NRG 857C]
          Length = 368

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 177 QVRKIAEDLG 186


>gi|170682526|ref|YP_001744044.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli SMS-3-5]
 gi|218549144|ref|YP_002382935.1| tRNA-specific 2-thiouridylase MnmA [Escherichia fergusonii ATCC
           35469]
 gi|205816880|sp|B1LI10|MNMA_ECOSM RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|170520244|gb|ACB18422.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli SMS-3-5]
 gi|218356685|emb|CAQ89312.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia fergusonii ATCC 35469]
 gi|323967072|gb|EGB62498.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli M863]
 gi|323976496|gb|EGB71584.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli TW10509]
 gi|324113924|gb|EGC07898.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia fergusonii B253]
 gi|325497565|gb|EGC95424.1| orf, hypothetical protein [Escherichia fergusonii ECD227]
 gi|327253837|gb|EGE65466.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli STEC_7v]
          Length = 368

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 177 QVRKIAEDLG 186


>gi|161984923|ref|YP_408327.2| tRNA-specific 2-thiouridylase MnmA [Shigella boydii Sb227]
 gi|205821943|sp|Q31ZK9|MNMA_SHIBS RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|332094391|gb|EGI99440.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shigella boydii 3594-74]
          Length = 368

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 177 QVRKIAEDLG 186


>gi|110805161|ref|YP_688681.1| tRNA-specific 2-thiouridylase MnmA [Shigella flexneri 5 str. 8401]
 gi|161485922|ref|NP_707062.2| tRNA-specific 2-thiouridylase MnmA [Shigella flexneri 2a str. 301]
 gi|161486505|ref|NP_836851.2| tRNA-specific 2-thiouridylase MnmA [Shigella flexneri 2a str.
           2457T]
 gi|123342960|sp|Q0T5N9|MNMA_SHIF8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205828969|sp|Q83LF7|MNMA_SHIFL RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|110614709|gb|ABF03376.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
 gi|313650389|gb|EFS14796.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shigella flexneri 2a str. 2457T]
 gi|332758322|gb|EGJ88645.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shigella flexneri 4343-70]
 gi|332761100|gb|EGJ91387.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shigella flexneri K-671]
 gi|332767378|gb|EGJ97572.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shigella flexneri 2930-71]
 gi|333005353|gb|EGK24871.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shigella flexneri K-218]
 gi|333019439|gb|EGK38722.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shigella flexneri K-304]
          Length = 368

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 177 QVRKIAEDLG 186


>gi|38703944|ref|NP_309632.2| tRNA-specific 2-thiouridylase MnmA [Escherichia coli O157:H7 str.
           Sakai]
 gi|161367616|ref|NP_287347.2| tRNA-specific 2-thiouridylase MnmA [Escherichia coli O157:H7
           EDL933]
 gi|168749736|ref|ZP_02774758.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli O157:H7 str. EC4113]
 gi|168756472|ref|ZP_02781479.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli O157:H7 str. EC4401]
 gi|168762550|ref|ZP_02787557.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli O157:H7 str. EC4501]
 gi|168771001|ref|ZP_02796008.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli O157:H7 str. EC4486]
 gi|168776054|ref|ZP_02801061.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli O157:H7 str. EC4196]
 gi|168782470|ref|ZP_02807477.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli O157:H7 str. EC4076]
 gi|168787608|ref|ZP_02812615.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli O157:H7 str. EC869]
 gi|168800455|ref|ZP_02825462.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli O157:H7 str. EC508]
 gi|195938765|ref|ZP_03084147.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli O157:H7 str. EC4024]
 gi|208808537|ref|ZP_03250874.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli O157:H7 str. EC4206]
 gi|208814775|ref|ZP_03255954.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli O157:H7 str. EC4045]
 gi|208822542|ref|ZP_03262861.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli O157:H7 str. EC4042]
 gi|209397379|ref|YP_002270050.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli O157:H7 str. EC4115]
 gi|217328487|ref|ZP_03444569.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli O157:H7 str. TW14588]
 gi|254792593|ref|YP_003077430.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli O157:H7 str.
           TW14359]
 gi|261227234|ref|ZP_05941515.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|261258759|ref|ZP_05951292.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli O157:H7 str. FRIK966]
 gi|291282168|ref|YP_003498986.1| putative tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase, contains the PP-loop ATPase domain
           [Escherichia coli O55:H7 str. CB9615]
 gi|24638314|sp|Q8X735|MNMA_ECO57 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|187768490|gb|EDU32334.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli O157:H7 str. EC4196]
 gi|188016000|gb|EDU54122.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli O157:H7 str. EC4113]
 gi|189000055|gb|EDU69041.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli O157:H7 str. EC4076]
 gi|189356337|gb|EDU74756.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli O157:H7 str. EC4401]
 gi|189360141|gb|EDU78560.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli O157:H7 str. EC4486]
 gi|189367117|gb|EDU85533.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli O157:H7 str. EC4501]
 gi|189372405|gb|EDU90821.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli O157:H7 str. EC869]
 gi|189377259|gb|EDU95675.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli O157:H7 str. EC508]
 gi|208728338|gb|EDZ77939.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli O157:H7 str. EC4206]
 gi|208731423|gb|EDZ80111.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli O157:H7 str. EC4045]
 gi|208738027|gb|EDZ85710.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli O157:H7 str. EC4042]
 gi|209158779|gb|ACI36212.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli O157:H7 str. EC4115]
 gi|217318914|gb|EEC27340.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli O157:H7 str. TW14588]
 gi|254591993|gb|ACT71354.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli O157:H7 str. TW14359]
 gi|290762041|gb|ADD56002.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase, contains the PP-loop ATPase domain
           [Escherichia coli O55:H7 str. CB9615]
 gi|320187860|gb|EFW62530.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
           [Escherichia coli O157:H7 str. EC1212]
 gi|320637601|gb|EFX07401.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli O157:H7 str.
           G5101]
 gi|320643161|gb|EFX12362.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli O157:H- str.
           493-89]
 gi|320648098|gb|EFX16774.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli O157:H- str. H
           2687]
 gi|320653931|gb|EFX22005.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320659411|gb|EFX26980.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320664548|gb|EFX31699.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli O157:H7 str.
           LSU-61]
 gi|326339412|gb|EGD63224.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli O157:H7 str.
           1044]
 gi|326341465|gb|EGD65256.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
           [Escherichia coli O157:H7 str. 1125]
          Length = 368

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 177 QVRKIAEDLG 186


>gi|194433661|ref|ZP_03065937.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shigella dysenteriae 1012]
 gi|194418090|gb|EDX34183.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shigella dysenteriae 1012]
 gi|320179167|gb|EFW54125.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
           [Shigella boydii ATCC 9905]
 gi|332089265|gb|EGI94371.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shigella boydii 5216-82]
 gi|332092905|gb|EGI97973.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shigella dysenteriae 155-74]
          Length = 368

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 177 QVRKIAEDLG 186


>gi|331682639|ref|ZP_08383258.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli H299]
 gi|331080270|gb|EGI51449.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli H299]
          Length = 368

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 177 QVRKIAEDLG 186


>gi|146311302|ref|YP_001176376.1| tRNA-specific 2-thiouridylase MnmA [Enterobacter sp. 638]
 gi|205816867|sp|A4W9E5|MNMA_ENT38 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|145318178|gb|ABP60325.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterobacter sp. 638]
          Length = 369

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 53/189 (28%), Gaps = 9/189 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +       ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSASPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +             +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            +                 LG +  V    P+  L+K 
Sbjct: 117 EDLGADFIATGHYVRRADVDGKSQLLRGLDGNKDQSYFLYTLGHDQIVQSLFPVGELEKP 176

Query: 179 ETWKLAQDI 187
           E  K+A+++
Sbjct: 177 EVRKIAENL 185


>gi|73855169|gb|AAZ87876.1| conserved hypothetical protein [Shigella sonnei Ss046]
          Length = 383

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 16  MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 73

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 74  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 131

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 132 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 191

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 192 QVRKIAEDLG 201


>gi|220931733|ref|YP_002508641.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Halothermothrix orenii H 168]
 gi|259495830|sp|B8CWH7|MNMA_HALOH RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|219993043|gb|ACL69646.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Halothermothrix orenii H 168]
          Length = 358

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 58/190 (30%), Gaps = 15/190 (7%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVET----LSFDYGQRNKVELECRLCVRKKIVELM 64
              L+  SGG DSS   +   ++   V      +  DY Q    E  C  C    I +  
Sbjct: 2   DRVLVAMSGGVDSSVTAALLKEQGYEVIGGTMEIFPDYEQPPLDEGGC--CSLSSIEDAR 59

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     +      L  +    +  N   + ++   PN  V   N I        A 
Sbjct: 60  RVAHHIGIRHYTFN---LKKVFEEEVINNFVNEYKNARTPNPCVVCNNEIKFRSLLKKAL 116

Query: 125 RLGITNI---VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL---KKY 178
            L    I      + E + +G    +       +    L   +   +   LM L    K 
Sbjct: 117 ELDADYIATGHYAIVEHNVNGKHLLKKAKDVDKDQTYMLYGLTQFQLSHTLMPLGNYTKQ 176

Query: 179 ETWKLAQDIG 188
           E  ++A+D G
Sbjct: 177 EVRQMAKDFG 186


>gi|89107979|ref|AP_001759.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Escherichia coli str. K-12 substr. W3110]
 gi|90111218|ref|NP_415651.4| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli str. K-12 substr. MG1655]
 gi|157156703|ref|YP_001462402.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli E24377A]
 gi|157160657|ref|YP_001457975.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli HS]
 gi|170020474|ref|YP_001725428.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli ATCC 8739]
 gi|170080784|ref|YP_001730104.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli str. K-12 substr. DH10B]
 gi|191168327|ref|ZP_03030119.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli B7A]
 gi|193066260|ref|ZP_03047312.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli E22]
 gi|193071716|ref|ZP_03052616.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli E110019]
 gi|194436948|ref|ZP_03069047.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli 101-1]
 gi|209918390|ref|YP_002292474.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli SE11]
 gi|218553711|ref|YP_002386624.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli IAI1]
 gi|218694667|ref|YP_002402334.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli 55989]
 gi|238900387|ref|YP_002926183.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli BW2952]
 gi|253773843|ref|YP_003036674.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254161240|ref|YP_003044348.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli B str. REL606]
 gi|256018611|ref|ZP_05432476.1| tRNA-specific 2-thiouridylase MnmA [Shigella sp. D9]
 gi|256023169|ref|ZP_05437034.1| tRNA-specific 2-thiouridylase MnmA [Escherichia sp. 4_1_40B]
 gi|260843449|ref|YP_003221227.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Escherichia coli O103:H2 str. 12009]
 gi|260854815|ref|YP_003228706.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Escherichia coli O26:H11 str. 11368]
 gi|260867562|ref|YP_003233964.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Escherichia coli O111:H- str. 11128]
 gi|293433421|ref|ZP_06661849.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli B088]
 gi|297518453|ref|ZP_06936839.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli OP50]
 gi|301029558|ref|ZP_07192636.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 196-1]
 gi|307137768|ref|ZP_07497124.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli H736]
 gi|307310090|ref|ZP_07589740.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli W]
 gi|331667534|ref|ZP_08368398.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli TA271]
 gi|8039808|sp|P25745|MNMA_ECOLI RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205816868|sp|A7ZZ88|MNMA_ECOHS RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205816869|sp|B1XA43|MNMA_ECODH RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205816870|sp|A7ZKS3|MNMA_ECO24 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205816881|sp|B1IUD4|MNMA_ECOLC RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|4062697|dbj|BAA35955.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Escherichia coli str. K12 substr. W3110]
 gi|87081837|gb|AAC74217.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli str. K-12 substr. MG1655]
 gi|157066337|gb|ABV05592.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli HS]
 gi|157078733|gb|ABV18441.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli E24377A]
 gi|169755402|gb|ACA78101.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli ATCC 8739]
 gi|169888619|gb|ACB02326.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli str. K-12 substr. DH10B]
 gi|190901622|gb|EDV61379.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli B7A]
 gi|192926109|gb|EDV80751.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli E22]
 gi|192954978|gb|EDV85481.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli E110019]
 gi|194423931|gb|EDX39919.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli 101-1]
 gi|209911649|dbj|BAG76723.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Escherichia coli SE11]
 gi|218351399|emb|CAU97105.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli 55989]
 gi|218360479|emb|CAQ98033.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli IAI1]
 gi|238863704|gb|ACR65702.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli BW2952]
 gi|242376935|emb|CAQ31656.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli BL21(DE3)]
 gi|253324887|gb|ACT29489.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253973141|gb|ACT38812.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli B str. REL606]
 gi|253977355|gb|ACT43025.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli BL21(DE3)]
 gi|257753464|dbj|BAI24966.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Escherichia coli O26:H11 str. 11368]
 gi|257758596|dbj|BAI30093.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Escherichia coli O103:H2 str. 12009]
 gi|257763918|dbj|BAI35413.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Escherichia coli O111:H- str. 11128]
 gi|260449728|gb|ACX40150.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli DH1]
 gi|291324240|gb|EFE63662.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli B088]
 gi|299877553|gb|EFI85764.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli MS 196-1]
 gi|306909808|gb|EFN40302.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli W]
 gi|309701457|emb|CBJ00761.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli ETEC H10407]
 gi|315060410|gb|ADT74737.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli W]
 gi|315616009|gb|EFU96635.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli 3431]
 gi|320175639|gb|EFW50731.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
           [Shigella dysenteriae CDC 74-1112]
 gi|320184390|gb|EFW59201.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
           [Shigella flexneri CDC 796-83]
 gi|320201029|gb|EFW75613.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
           [Escherichia coli EC4100B]
 gi|323153179|gb|EFZ39443.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli EPECa14]
 gi|323179331|gb|EFZ64901.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli 1180]
 gi|323185683|gb|EFZ71044.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli 1357]
 gi|323379030|gb|ADX51298.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli KO11]
 gi|323937873|gb|EGB34137.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli E1520]
 gi|323942603|gb|EGB38770.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli E482]
 gi|323962732|gb|EGB58310.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli H489]
 gi|323973277|gb|EGB68466.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli TA007]
 gi|324117296|gb|EGC11203.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli E1167]
 gi|331065119|gb|EGI37014.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli TA271]
 gi|332342735|gb|AEE56069.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TrmU
           [Escherichia coli UMNK88]
          Length = 368

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 177 QVRKIAEDLG 186


>gi|253828114|ref|ZP_04870999.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Helicobacter canadensis MIT 98-5491]
 gi|253511520|gb|EES90179.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Helicobacter canadensis MIT 98-5491]
          Length = 349

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 47/177 (26%), Gaps = 10/177 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              LLL SGG DSS C      +   V  +      + +        ++K    L     
Sbjct: 2   KKVLLLMSGGVDSSYCAYLLQKQGYSVYGIYLKLHDKEEKHDYYTRNIQKCAESLN---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                  I+    L   S      +     +    PN        +    A  LA  LG 
Sbjct: 58  ---IPYQIVDERELFKKSVYDYFVDS---YKKGLTPNPCAMCNPNVKFNIAFKLAKDLGC 111

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
             +  G      +G      DT +     +       +      +  KK E  K   
Sbjct: 112 EFVATGHYAQIKNGRIAQAVDTHKDQSYFLFGLKPEWIEKIIFPLGDKKKEEIKPIA 168


>gi|218700344|ref|YP_002407973.1| tRNA-specific 2-thiouridylase MnmA [Escherichia coli IAI39]
 gi|218704607|ref|YP_002412126.1| tRNA -specific 2-thiouridylase MnmA [Escherichia coli UMN026]
 gi|218370330|emb|CAR18133.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli IAI39]
 gi|218431704|emb|CAR12586.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli UMN026]
 gi|284920959|emb|CBG34022.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli 042]
 gi|330910947|gb|EGH39457.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli AA86]
          Length = 368

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 177 QVRKIAEDLG 186


>gi|296119548|ref|ZP_06838106.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Corynebacterium ammoniagenes DSM 20306]
 gi|295967431|gb|EFG80698.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Corynebacterium ammoniagenes DSM 20306]
          Length = 361

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/182 (13%), Positives = 49/182 (26%), Gaps = 5/182 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK-KIVELMPKWK 68
             L+  SGG DSS   + A++    V  +     +  +   E        +      +  
Sbjct: 2   RVLVAMSGGVDSSVAAARAVEAGHEVVGVHLALHKDAQQTREKARGCCSLEDSADARRIC 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D LG    +      +    ++  +          PN  +     I           LG 
Sbjct: 62  DKLGIPFYVW--DFSEEFKEAVITDFVDSYARGETPNPCLRCNEKIKFAALLRKGMALGF 119

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYETWKLAQD 186
             +  G   T        R       ++ +   + +    +         K +  + A+ 
Sbjct: 120 DAVATGHYATLDKDGYMRRSLDENKDQSYVLGVITAEELSYCYFPIGDTPKPQIREEAKR 179

Query: 187 IG 188
            G
Sbjct: 180 HG 181


>gi|295134637|ref|YP_003585313.1| argininosuccinate synthase [Zunongwangia profunda SM-A87]
 gi|294982652|gb|ADF53117.1| argininosuccinate synthase [Zunongwangia profunda SM-A87]
          Length = 393

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 11/175 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++ +SGG D+S C     +    V  +S + G  +K E++      KKI     K  
Sbjct: 2   KKVVIAYSGGLDTSYCAKSLSNEGFEVHAVSVNTGGFSKEEVQKIGDNAKKIGATTYK-- 59

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                     +  +       +   +   +  NN     V    I+  +     A  +G 
Sbjct: 60  ---------NIDAVSSFYTKVVKYLIFGNVLKNNTYPLSVSAERIVQAIEIINYAKEIGA 110

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             I  G                I A E  I   +          +   K    ++
Sbjct: 111 KYIAHGSTGAGNDQVRFDMIFQIIAPEIEIITPIRDKQLSRQEEIDYLKENGVEM 165


>gi|161986546|ref|YP_310111.2| tRNA-specific 2-thiouridylase MnmA [Shigella sonnei Ss046]
 gi|205829110|sp|Q3Z2Y6|MNMA_SHISS RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 368

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 177 QVRKIAEDLG 186


>gi|121606705|ref|YP_984034.1| tRNA-specific 2-thiouridylase MnmA [Polaromonas naphthalenivorans
           CJ2]
 gi|205816918|sp|A1VTY5|MNMA_POLNA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|120595674|gb|ABM39113.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Polaromonas naphthalenivorans CJ2]
          Length = 394

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 48/196 (24%), Gaps = 12/196 (6%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D        ++  SGG DS+        +   V  +     + +     C   +     +
Sbjct: 2   DKQHSKQRIVVGLSGGVDSAVTAYLLKQQGHEVIGIFMKNWEDDDDSEFCSSNI-----D 56

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
            +     +      +            +      + Q    PN  +     I        
Sbjct: 57  FVDAAAVADVIGIEIEHVNFAANYKDRVFAEFLREYQAGRTPNPDILCNAEIKFKAFLDH 116

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWL 175
           A RLG   I  G             H        +         L          P+  L
Sbjct: 117 AMRLGAEKIATGHYARVRQNEATGLHELLKGLDPSKDQSYFLHRLNQAQLSKTLFPVGEL 176

Query: 176 KKYETWKLAQDIGGQD 191
            K E  ++A +IG  +
Sbjct: 177 HKTEVRRIADEIGLPN 192


>gi|260828723|ref|XP_002609312.1| hypothetical protein BRAFLDRAFT_124725 [Branchiostoma floridae]
 gi|229294668|gb|EEN65322.1| hypothetical protein BRAFLDRAFT_124725 [Branchiostoma floridae]
          Length = 383

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/175 (12%), Positives = 45/175 (25%), Gaps = 13/175 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + +    +L +SGG D+S  L W +++   V     D GQ    E +      K +    
Sbjct: 1   MSEDKKVVLAYSGGLDTSCILVWLIEQGFDVIAYMADVGQ----EEDFAEAKEKALKLGA 56

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            K      +   +   I   +  +++ ++                            +A 
Sbjct: 57  KKVYIEDLKKQFVDEYIWPAVQANAIYED---------RYLMGTAVARPCIARRQVEVAK 107

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           + G   +  G                       I    +           L  +E
Sbjct: 108 KEGAQYVSHGATGKGNDQIRFELTCYALYPGVKIYAPWKIPAFFERFKGRLDLFE 162


>gi|114793688|pdb|2DER|A Chain A, Cocrystal Structure Of An Rna Sulfuration Enzyme Mnma And
           Trna-Glu In The Initial Trna Binding State
 gi|114793689|pdb|2DER|B Chain B, Cocrystal Structure Of An Rna Sulfuration Enzyme Mnma And
           Trna-Glu In The Initial Trna Binding State
 gi|114793692|pdb|2DET|A Chain A, Cocrystal Structure Of An Rna Sulfuration Enzyme Mnma And
           Trna-Glu In The Pre-Reaction State
 gi|114793694|pdb|2DEU|A Chain A, Cocrystal Structure Of An Rna Sulfuration Enzyme Mnma And
           Trna-Glu In The Adenylated Intermediate State
 gi|114793695|pdb|2DEU|B Chain B, Cocrystal Structure Of An Rna Sulfuration Enzyme Mnma And
           Trna-Glu In The Adenylated Intermediate State
          Length = 380

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 13  MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 70

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 71  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 128

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 129 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 188

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 189 QVRKIAEDLG 198


>gi|188494195|ref|ZP_03001465.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli 53638]
 gi|188489394|gb|EDU64497.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli 53638]
          Length = 368

 Score = 55.3 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 177 QVRKIAEDLG 186


>gi|262306111|gb|ACY45648.1| gln amidotransferase [Tomocerus sp. 'Tom2']
          Length = 196

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 2/66 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +    L+L SGG DS+ C +      R D++  +  D G   K E +       ++   +
Sbjct: 42  RNQKVLMLLSGGVDSTVCAALLKKALREDQIIAVHVDNGFLRKNESDAVEQSLSRLGLKI 101

Query: 65  PKWKDS 70
              K S
Sbjct: 102 QVVKAS 107


>gi|197104258|ref|YP_002129635.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Phenylobacterium zucineum HLK1]
 gi|196477678|gb|ACG77206.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Phenylobacterium zucineum HLK1]
          Length = 371

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 48/185 (25%), Gaps = 9/185 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +        V  ++   Y     V+ +   C  + I +     +
Sbjct: 8   RIVAAMSGGVDSTVTAALLARAGYDVVGVTLQLYDHGAAVQKKGACCAGQDIHDARTAAE 67

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L            + ++ A        P   +     +       +A  LG 
Sbjct: 68  GIGIPHYVLD---YESRFKQQVIEDFADAYLRGETPIPCIRCNQTVKFRDLLDVARDLGA 124

Query: 129 TNIVIGVCETDYSGY-----PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +  G      +G                         E    +  PL  + K      
Sbjct: 125 QAMATGHYVRREAGAEGPELHRAADPARDQSYFLFATTAEQLDYLRFPLGAMPKPAVRAA 184

Query: 184 AQDIG 188
           A ++G
Sbjct: 185 AAELG 189


>gi|83319617|ref|YP_424495.1| tRNA-specific 2-thiouridylase MnmA [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
 gi|123535669|sp|Q2SRW8|MNMA_MYCCT RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|83283503|gb|ABC01435.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycoplasma capricolum subsp. capricolum ATCC 27343]
          Length = 375

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 46/198 (23%), Gaps = 23/198 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN------------------KV 48
                ++  SGG DSS      L +   VE L                          + 
Sbjct: 1   MKQKVVVGLSGGVDSSVACYLLLQQGYEVEGLFMRNWDSATNNDILGNTNINDDICPQEQ 60

Query: 49  ELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFV 108
           +      V  K+   + +  D + E      +   +    + T N  +        + F+
Sbjct: 61  DYLDAKAVADKLNIKLHRV-DFIKEYWDYVFSYFIEEYKKARTPNPDILCNKYIKFDKFL 119

Query: 109 PGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV 168
                        +    G    V     T                     L        
Sbjct: 120 NYAINQLNADYIAM----GHYAKVEFNKTTKQYELIKASDINKDQTYFLSQLNQNQLSKT 175

Query: 169 HTPLMWLKKYETWKLAQD 186
             PL  L K +  K+A +
Sbjct: 176 LFPLANLTKEQVRKIALE 193


>gi|332881980|ref|ZP_08449621.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332680106|gb|EGJ53062.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 397

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 38/131 (29%), Gaps = 3/131 (2%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS       ++   V  L       + V +       +   + +   +
Sbjct: 2   KRVVVGLSGGVDSSVAAYLLKEQGYEVIGLFMKNWHDDSVTISDECPWLEDSNDALLVAE 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   + ++   +   + +   +  + +    PN  V     I       LA  LG 
Sbjct: 62  KLGIPFQTVDMS---EPYKARIVDYMFNEYEHGRTPNPDVLCNREIKFDVFMKLALSLGA 118

Query: 129 TNIVIGVCETD 139
             +  G     
Sbjct: 119 DYVATGHYCRK 129


>gi|315223915|ref|ZP_07865760.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Capnocytophaga ochracea F0287]
 gi|314946087|gb|EFS98091.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Capnocytophaga ochracea F0287]
          Length = 397

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 38/131 (29%), Gaps = 3/131 (2%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS       ++   V  L       + V +       +   + +   +
Sbjct: 2   KRVVVGLSGGVDSSVAAYLLKEQGYEVIGLFMKNWHDDSVTISDECPWLEDSNDALLVAE 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   + ++   +   + +   +  + +    PN  V     I       LA  LG 
Sbjct: 62  KLGIPFQTVDMS---EPYKARIVDYMFNEYEHGRTPNPDVLCNREIKFDVFMKLALSLGA 118

Query: 129 TNIVIGVCETD 139
             +  G     
Sbjct: 119 DYVATGHYCRK 129


>gi|309811460|ref|ZP_07705245.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Dermacoccus sp. Ellin185]
 gi|308434586|gb|EFP58433.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Dermacoccus sp. Ellin185]
          Length = 525

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 11/185 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DSS   +       DR+  +  D+G     E      V++  V       
Sbjct: 222 RAICGLSGGVDSSVAAAMVQKAIGDRLTCVFVDHGLLRAGE---AEQVKEDFVAAT---- 274

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G D ++  A    +   +   +   K +        V  +    +V A + +     
Sbjct: 275 ---GVDLVVVDASQQFLDALAGQSDPETKRKIIGREFIRVFEQAARDIVGAESSSEHPVE 331

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +   T+  PL  L K E  ++  ++G
Sbjct: 332 FLVQGTLYPDVVESGGGTGAANIKSHHNVGGLPDDLQFTLVEPLRSLFKDEVRQVGLELG 391

Query: 189 GQDLV 193
             + +
Sbjct: 392 VPEAI 396


>gi|254294555|ref|YP_003060578.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Hirschia baltica ATCC 49814]
 gi|254043086|gb|ACT59881.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Hirschia baltica ATCC 49814]
          Length = 409

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 51/190 (26%), Gaps = 5/190 (2%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIV 61
           D  +     +   SGG DS+   +        V  ++   Y     ++ +   C  + I 
Sbjct: 34  DKPRSETRVVAAMSGGVDSTVVAALLHHAGYDVVGVTLQLYDHGAALKKQGACCAGQDIH 93

Query: 62  ELMPKWKDSLGEDHILPLAILGD---ISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
           +            ++L          +   + T             N  V  R+++    
Sbjct: 94  DARRACDALGIPHYVLDYESRFKEQVMEDFADTYLAGSTPIPCVRCNQTVKFRDLLETSK 153

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
               A  +   + +  V   +                       E    +  PL  + K 
Sbjct: 154 DLG-ADCMATGHYIRRVVGENGPELARAADPDKDQSYFLFATTHEQLDYLRFPLGGMNKE 212

Query: 179 ETWKLAQDIG 188
            T K+A  +G
Sbjct: 213 STRKVASALG 222


>gi|256820771|ref|YP_003142050.1| tRNA-specific 2-thiouridylase MnmA [Capnocytophaga ochracea DSM
           7271]
 gi|256582354|gb|ACU93489.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Capnocytophaga ochracea DSM 7271]
          Length = 397

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 38/131 (29%), Gaps = 3/131 (2%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS       ++   V  L       + V +       +   + +   +
Sbjct: 2   KRVVVGLSGGVDSSVAAYLLKEQGYEVIGLFMKNWHDDSVTISDECPWLEDSNDALLVAE 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   + ++   +   + +   +  + +    PN  V     I       LA  LG 
Sbjct: 62  KLGIPFQTVDMS---EPYKARIVDYMFNEYEHGRTPNPDVLCNREIKFDVFMKLALSLGA 118

Query: 129 TNIVIGVCETD 139
             +  G     
Sbjct: 119 DYVATGHYCRK 129


>gi|213962751|ref|ZP_03391012.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Capnocytophaga sputigena Capno]
 gi|213954746|gb|EEB66067.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Capnocytophaga sputigena Capno]
          Length = 397

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 38/131 (29%), Gaps = 3/131 (2%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS       ++   V  L       + V +       +   + +   +
Sbjct: 2   KRVVVGLSGGVDSSVAAYLLKEQGYEVIGLFMKNWHDDSVTISDECPWLEDSNDALLVAE 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   + ++   +   + +   +  + +    PN  V     I       LA  LG 
Sbjct: 62  KLGIPFQTVDMS---EPYKARIVDYMFNEYEHGRTPNPDVLCNREIKFDVFMKLALSLGA 118

Query: 129 TNIVIGVCETD 139
             +  G     
Sbjct: 119 DYVATGHYCRK 129


>gi|209528181|ref|ZP_03276652.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Arthrospira maxima CS-328]
 gi|209491390|gb|EDZ91774.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Arthrospira maxima CS-328]
          Length = 359

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 52/185 (28%), Gaps = 15/185 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS   +    +   V  L+        +      C  + +V+     + 
Sbjct: 3   KIVVGLSGGVDSSAAAAILHHQGYEVVGLTL------WLMRGKGQCCSEGMVDAAHICEQ 56

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                +I+    L                      +          ++  A+    L I 
Sbjct: 57  LGIPHYIVDSRDLFQTHIIDYLVEGYGAGITPLPCSQCNRAVKFGPMLGYAST--ELNIN 114

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-------VTVHTPLMWLKKYETWK 182
           +I  G            RH   RA++   +     +         V  PL  + K ET +
Sbjct: 115 HIATGHYARVSYNSQCDRHQLKRAVDRTKDQSYFLYDLTQDLLAGVVFPLGEVPKSETRR 174

Query: 183 LAQDI 187
           +A   
Sbjct: 175 IAAQY 179


>gi|262306015|gb|ACY45600.1| gln amidotransferase [Armadillidium vulgare]
          Length = 197

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 2/65 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +   L+L SGG DS+ C +        D+V  +  D G   K E++      +K+   + 
Sbjct: 43  SNKVLMLVSGGVDSTVCAALLRKALTEDQVIAVHIDNGFLRKKEVQQVEESLQKLGLKLK 102

Query: 66  KWKDS 70
                
Sbjct: 103 VVSAH 107


>gi|166154498|ref|YP_001654616.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chlamydia trachomatis 434/Bu]
 gi|166155373|ref|YP_001653628.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|301335758|ref|ZP_07224002.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia trachomatis L2tet1]
 gi|205813555|sp|B0B7K3|MNMA_CHLT2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205813565|sp|B0BBR8|MNMA_CHLTB RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|165930486|emb|CAP03979.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chlamydia trachomatis 434/Bu]
 gi|165931361|emb|CAP06933.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chlamydia trachomatis L2b/UCH-1/proctitis]
          Length = 358

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 54/186 (29%), Gaps = 9/186 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSF-DYGQRNKVELECRLCVRKKIVELM 64
              + ++  SGG DSS        +    V  L   ++G++++          + +  + 
Sbjct: 1   MRKTVIVAMSGGVDSSVVAYLLKKQGEYNVVGLFMKNWGEQDENGECTATKDFRDVERIA 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            +            ++   +      ++ +             +  R I F +    +  
Sbjct: 61  EQLSIPYYT-----VSFSKEYKERVFSRFLREYANGYTPNPDVLCNREIKFDLLQKKVLE 115

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYETWK 182
             G        C     G    R       ++    G        V  PL  + K E  +
Sbjct: 116 LKGDFLATGHYCRGGADGTGLSRGIDPNKDQSYFLCGTPKDALSNVLFPLGGMYKTEVRR 175

Query: 183 LAQDIG 188
           +AQ+ G
Sbjct: 176 IAQEAG 181


>gi|157813154|gb|ABV81322.1| putative GMP synthetase [Tanystylum orbiculare]
          Length = 197

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 2/63 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +   L+L SGG DS+ C +        ++V  +  D G   K E +      +K+   + 
Sbjct: 43  SNKVLVLVSGGVDSTVCAALLHKALEQNQVIAVHIDNGFMRKQESKQVEESLRKLGLQLT 102

Query: 66  KWK 68
              
Sbjct: 103 VIN 105


>gi|117620212|ref|YP_856231.1| thiamine biosynthesis protein ThiI [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|189030614|sp|A0KIY0|THII_AERHH RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|117561619|gb|ABK38567.1| thiamine biosynthesis/tRNA modification protein ThiI [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 482

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 55/188 (29%), Gaps = 25/188 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           I      L L SGG DS       + R  RV    F+ G            +   + ++ 
Sbjct: 174 IATQEDVLSLISGGFDSGVASFQFIKRGCRVHYCFFNLGG-------AAHEI--GVKQVA 224

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
               +  G  H +              + V  +I +             + +  AA +A 
Sbjct: 225 YHLWNRFGSSHRVRFTA-------VDFEPVVAEILEKIDNGQMGVVLKRMMMRAAAKVAD 277

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
              I  +V G C    S       + I  +   +         +  PL+   K +    A
Sbjct: 278 EFQIPALVTGECVGQVSSQTLTNLNVIDRVTDKV---------ILRPLITWDKPDIISEA 328

Query: 185 QDIGGQDL 192
           + IG  + 
Sbjct: 329 RRIGTLEF 336


>gi|333019852|gb|EGK39124.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shigella flexneri K-227]
          Length = 368

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFKLFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 177 QVRKIAEDLG 186


>gi|254451424|ref|ZP_05064861.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Octadecabacter antarcticus 238]
 gi|198265830|gb|EDY90100.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Octadecabacter antarcticus 238]
          Length = 379

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 18/149 (12%), Positives = 36/149 (24%), Gaps = 4/149 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +   +    V  ++   Y     +  +   C  + I +     +
Sbjct: 20  RVVVAMSGGVDSSVVAAQLAEEGYDVVGVTLQLYDHGAALAKKGACCAGRDIHDARRVAE 79

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D     ++L           ++    A        P   +     +        A  L  
Sbjct: 80  DMGFPHYVLDYEN---TFREAVIDEFADSYLAGATPVPCIRCNERVKFKDLLETAKDLDA 136

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETA 157
             +  G       G               
Sbjct: 137 DCMATGHYIQRKMGARGAELHCAEDANRD 165


>gi|163736308|ref|ZP_02143727.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Phaeobacter gallaeciensis BS107]
 gi|161390178|gb|EDQ14528.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Phaeobacter gallaeciensis BS107]
          Length = 381

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/184 (11%), Positives = 47/184 (25%), Gaps = 6/184 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +   D    V  ++   Y     +  +   C    I +     +
Sbjct: 22  RVVVAMSGGVDSSVVAAHLADEGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDARRVAE 81

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +     ++L    +   +      +  +                   L+  A        
Sbjct: 82  ERGFPHYVLDYENIFKDAVIDEFADSYLAGATPVPCIRCNERVKFKDLLETARDLEA-DC 140

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL----KKYETWKLA 184
                 +   D    P+         + +  L   +   +      L     K  T ++A
Sbjct: 141 MATGHYIQRKDGPNGPELHSAEDANRDQSYFLFSTTPEQLDYLRFPLGHLPSKDATREMA 200

Query: 185 QDIG 188
              G
Sbjct: 201 SQYG 204


>gi|163741163|ref|ZP_02148555.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Phaeobacter gallaeciensis 2.10]
 gi|161385516|gb|EDQ09893.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Phaeobacter gallaeciensis 2.10]
          Length = 381

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/184 (11%), Positives = 47/184 (25%), Gaps = 6/184 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +   D    V  ++   Y     +  +   C    I +     +
Sbjct: 22  RVVVAMSGGVDSSVVAAHLADEGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDARRVAE 81

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +     ++L    +   +      +  +                   L+  A        
Sbjct: 82  ERGFPHYVLDYENIFKDAVIDEFADSYLAGATPVPCIRCNERVKFKDLLETARDLEA-DC 140

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL----KKYETWKLA 184
                 +   D    P+         + +  L   +   +      L     K  T ++A
Sbjct: 141 MATGHYIQRKDGPNGPELHSAEDANRDQSYFLFSTTPEQLDYLRFPLGHLPSKDATREMA 200

Query: 185 QDIG 188
              G
Sbjct: 201 SQYG 204


>gi|133901714|ref|NP_001076631.1| hypothetical protein M106.4 [Caenorhabditis elegans]
 gi|112982608|emb|CAL36508.1| C. elegans protein M106.4c, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 709

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 52/187 (27%), Gaps = 3/187 (1%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              L++ SGG DS+ C +        +RV  +  D G     E +        +   + +
Sbjct: 237 KKVLVMVSGGVDSAVCAALLRRALGPNRVTAIHIDNGFMRHEESDAVEKSLAALDLPIHR 296

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +               G+++          +    N              +         
Sbjct: 297 YNFGTTFRSSTEHCKDGEVALDECDDPEMKRKIIGNTFIRVKDVIMKDLNINHDEYFLAQ 356

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G     +    +  +        T    +T +   +     V  PL    K E  +L +D
Sbjct: 357 GTLRPDLIESASALASGHADTIKTHH-NDTFLVRELRKLGKVVEPLKDFHKDEVRELGKD 415

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 416 LGLPESI 422


>gi|71992717|ref|NP_001022257.1| hypothetical protein M106.4 [Caenorhabditis elegans]
 gi|37620046|emb|CAE48508.1| C. elegans protein M106.4b, partially confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 794

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 52/187 (27%), Gaps = 3/187 (1%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              L++ SGG DS+ C +        +RV  +  D G     E +        +   + +
Sbjct: 322 KKVLVMVSGGVDSAVCAALLRRALGPNRVTAIHIDNGFMRHEESDAVEKSLAALDLPIHR 381

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +               G+++          +    N              +         
Sbjct: 382 YNFGTTFRSSTEHCKDGEVALDECDDPEMKRKIIGNTFIRVKDVIMKDLNINHDEYFLAQ 441

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G     +    +  +        T    +T +   +     V  PL    K E  +L +D
Sbjct: 442 GTLRPDLIESASALASGHADTIKTHH-NDTFLVRELRKLGKVVEPLKDFHKDEVRELGKD 500

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 501 LGLPESI 507


>gi|71992710|ref|NP_001022256.1| hypothetical protein M106.4 [Caenorhabditis elegans]
 gi|6016175|sp|Q09580|GUAA_CAEEL RecName: Full=Probable GMP synthase [glutamine-hydrolyzing];
           AltName: Full=Glutamine amidotransferase
 gi|3878715|emb|CAA87052.1| C. elegans protein M106.4a, partially confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 792

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 52/187 (27%), Gaps = 3/187 (1%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              L++ SGG DS+ C +        +RV  +  D G     E +        +   + +
Sbjct: 320 KKVLVMVSGGVDSAVCAALLRRALGPNRVTAIHIDNGFMRHEESDAVEKSLAALDLPIHR 379

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +               G+++          +    N              +         
Sbjct: 380 YNFGTTFRSSTEHCKDGEVALDECDDPEMKRKIIGNTFIRVKDVIMKDLNINHDEYFLAQ 439

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G     +    +  +        T    +T +   +     V  PL    K E  +L +D
Sbjct: 440 GTLRPDLIESASALASGHADTIKTHH-NDTFLVRELRKLGKVVEPLKDFHKDEVRELGKD 498

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 499 LGLPESI 505


>gi|255263925|ref|ZP_05343267.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thalassiobium sp. R2A62]
 gi|255106260|gb|EET48934.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thalassiobium sp. R2A62]
          Length = 378

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 49/186 (26%), Gaps = 10/186 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +   +    V  ++   Y     +  +   C    I +     +
Sbjct: 20  RVVVAMSGGVDSSVVAAQLAEEGYDVVGVTLQLYDHGAALAKQGACCAGLDIHDARRVAQ 79

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +     ++L           ++    A        P   +     +        A  L  
Sbjct: 80  EMGFPHYVLDYEN---TFKEAVIDEFADSYLAGATPVPCIRCNERVKFKDLLETAKDLDA 136

Query: 129 TNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL-KKYETWK 182
             +     +        +                 +  ++    +  PL  L  K ET  
Sbjct: 137 DCMATGHYIQRKMGDHGAELHCATDANRDQSYFLFSTTLDQLDYLRFPLGHLPSKNETRA 196

Query: 183 LAQDIG 188
           LA+  G
Sbjct: 197 LAEKYG 202


>gi|123965271|ref|YP_001010352.1| GMP synthase [Prochlorococcus marinus str. MIT 9515]
 gi|226739663|sp|A2BTY4|GUAA_PROM5 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|123199637|gb|ABM71245.1| Glutamine amidotransferase class-I:GMP synthase [Prochlorococcus
           marinus str. MIT 9515]
          Length = 528

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 50/191 (26%), Gaps = 19/191 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST           ++  +  D G   K E E                
Sbjct: 225 KKVLLALSGGVDSSTLAFLLNKAIGKQLTCMFIDQGFMRKGEPEF--------------L 270

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +   +   + +  +          N     ++          R              L 
Sbjct: 271 MEFFAKKFHIKVEYINARERFLHKLNGVTDPEEKRKIIGGEFIRVFEEESHRLGPFEYLA 330

Query: 128 ITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              +   V E+  +       +     I++      L  +    +  PL  L K E  KL
Sbjct: 331 QGTLYPDVIESAGTNLDPKTGERIAVKIKSHHNVGGLPKDLQFKLVEPLRKLFKDEVRKL 390

Query: 184 AQDIGGQDLVN 194
              +G  D + 
Sbjct: 391 GNALGLPDEII 401


>gi|325844820|ref|ZP_08168272.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Turicibacter sp. HGF1]
 gi|325489007|gb|EGC91395.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Turicibacter sp. HGF1]
          Length = 377

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 20/146 (13%), Positives = 35/146 (23%), Gaps = 15/146 (10%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD----------YGQRNKVELECRLC 55
            K    ++  SGG DSS       ++   VE +              G     +  C   
Sbjct: 4   NKGKKVIVGMSGGVDSSVAAYLLKEQGYEVEGVFMRNWDSAANADVLGNPTLNDEVCPQE 63

Query: 56  VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
           V     +          + H +            +      + +    PN  +     + 
Sbjct: 64  V--DYNDAKAVADQLGIKLHRVD---FVQEYWDRVFMYFLDEYRAGRTPNPDIMCNKEVK 118

Query: 116 LVFAATLAYRLGITNIVIGVCETDYS 141
                  A  LG   I +G       
Sbjct: 119 FKAFLDYAMNLGCDYIAMGHYARVSH 144


>gi|284052528|ref|ZP_06382738.1| tRNA-specific 2-thiouridylase MnmA [Arthrospira platensis str.
           Paraca]
 gi|291571991|dbj|BAI94263.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Arthrospira platensis NIES-39]
          Length = 359

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 51/185 (27%), Gaps = 15/185 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS   +    +   V  L+        +      C  + +V+     + 
Sbjct: 3   KIVVGLSGGVDSSAAAAILHHQGYEVVGLTL------WLMRGKGQCCSEGMVDAAHICEQ 56

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                +I+    L                      +          ++  A+    L I 
Sbjct: 57  LGIPHYIVDSRDLFQTHIIDYLVEGYGAGITPLPCSQCNRAVKFGPMLGYAST--ELNIN 114

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-------TVHTPLMWLKKYETWK 182
            I  G            RH   RA++   +     +         V  PL  + K ET +
Sbjct: 115 RIATGHYARVSYNSQCDRHQLKRAVDRTKDQSYFLYDLTQDILGAVVFPLGEVPKSETRR 174

Query: 183 LAQDI 187
           +A   
Sbjct: 175 IAAQY 179


>gi|114769872|ref|ZP_01447482.1| argininosuccinate synthase [alpha proteobacterium HTCC2255]
 gi|114549577|gb|EAU52459.1| argininosuccinate synthase [alpha proteobacterium HTCC2255]
          Length = 406

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 23/178 (12%), Positives = 50/178 (28%), Gaps = 9/178 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  ++    V T + D GQ  +++        + +   
Sbjct: 1   MSAPKKVVLAYSGGLDTSIILKWLEIEYGCEVVTFTADLGQGEELDP--ARKKAELLGIK 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                     +  +           +      + +   ++    +  R +         A
Sbjct: 59  AENIFIEDVREEFV--RDFVFPMFRANAVYEGLYLLGTSIARPLISKRLVEIAAQVGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV----TVHTPLMWLKK 177
              G T         + S Y       + A     +L   + +      H   +   K
Sbjct: 117 VAHGATGKGNDQVRFELSAYALNPDIKVIAPWREWDLSSRTKLLEFAEKHQIPIAKDK 174


>gi|119944723|ref|YP_942403.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Psychromonas ingrahamii 37]
 gi|166235075|sp|A1STI9|MNMA_PSYIN RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|119863327|gb|ABM02804.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Psychromonas ingrahamii 37]
          Length = 367

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 50/182 (27%), Gaps = 9/182 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS        +   VE L     + +  +  C     + + +       
Sbjct: 8   KVIVGMSGGVDSSVSAYLLQQQGYLVEGLFMKNWEEDDTDQYCA--AAQDLEDAQSVCDK 65

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                H +      +   +     +A            +  + I F  F    A  LG  
Sbjct: 66  LGIPLHTIN--FAAEYWDNVFEHFLAEYKAGRTPNPDIMCNKEIKFKAFLEFAAEDLGAD 123

Query: 130 NIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            I  G            +      +          +G +       P+  L+K E  ++A
Sbjct: 124 YIATGHYVRRREVDGHVQLLRGLDNNKDQSYFLYAIGEKQIAKSLFPVGELEKPEVRRIA 183

Query: 185 QD 186
           + 
Sbjct: 184 EQ 185


>gi|15604175|ref|NP_220690.1| tRNA-specific 2-thiouridylase MnmA [Rickettsia prowazekii str.
           Madrid E]
 gi|6226259|sp|Q9ZDM1|MNMA_RICPR RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|3860867|emb|CAA14767.1| unknown [Rickettsia prowazekii]
 gi|292571906|gb|ADE29821.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rickettsia prowazekii Rp22]
          Length = 358

 Score = 55.3 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 55/185 (29%), Gaps = 13/185 (7%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIVELMPKWK 68
           ++  SGG DSS   +   ++   V  ++   +DYG    V  +   C  + I +      
Sbjct: 5   VVAMSGGVDSSAVAAMLHEQGHNVIGITLQLYDYGI--AVGKKNACCAGQDIYDAKMVAN 62

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           S+  N          P   V     +        A  LG 
Sbjct: 63  KLGIPHYVLDYEN---KFKESVIDNFVDSYLHGETPLPCVQCNKSVKFRDLINTAKELGA 119

Query: 129 TNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +     V  +   + +        T         +  E    +  PL    KYET KL
Sbjct: 120 DKLATGHYVRKINGYNGAELHTGLDTTKDQSYFLFTITREQLEYLSFPLGGFTKYETRKL 179

Query: 184 AQDIG 188
           A   G
Sbjct: 180 ASKFG 184


>gi|326559941|gb|EGE10340.1| thiamine biosynthesis protein ThiI [Moraxella catarrhalis 103P14B1]
          Length = 430

 Score = 54.9 bits (130), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 60/189 (31%), Gaps = 27/189 (14%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY-GQRNKVELECRLCVRKKIVEL 63
           +      L L SGG DS       + R  RV    F+  GQ +++ ++            
Sbjct: 118 MSTQEDVLSLISGGFDSGVASHMFMRRGSRVHYCFFNLGGQAHELGVKQM---------A 168

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              W        +           +   + V  +I               + +  A+ +A
Sbjct: 169 YHLWSRYSLSHKV--------WFITVDFEPVVAEILKTIDDGHMGVVLKCMMVKAASQIA 220

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            ++ I  +V G      +       + I A  + +         +  PL+   K +  K+
Sbjct: 221 QQIKIQALVTGEAMGQVASQTLTNLNAIDAASSTL---------ILRPLITSDKEDIIKM 271

Query: 184 AQDIGGQDL 192
           A+ IG  ++
Sbjct: 272 AEKIGTANI 280


>gi|225573524|ref|ZP_03782279.1| hypothetical protein RUMHYD_01717 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039121|gb|EEG49367.1| hypothetical protein RUMHYD_01717 [Blautia hydrogenotrophica DSM
           10507]
          Length = 362

 Score = 54.9 bits (130), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 50/190 (26%), Gaps = 9/190 (4%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPK 66
               ++  SGG DSS            V  ++   +   ++   +  L    +++E   +
Sbjct: 3   RKRVVIGMSGGVDSSVAAYLLKKAGYEVLGVTMKTWTPVSESADDPGLGGSPEVIEDAKE 62

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +LG  + +            +      +  +   PN  V     +        A  L
Sbjct: 63  VARALGISYYVV--DFQRDFSDYVVDYFTQEYLEGRTPNPCVVCNRYVKWEALLNKAKEL 120

Query: 127 GITNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           G   I  G                 C            NL          P+    K E 
Sbjct: 121 GADYIATGHYARIVCLENGRYALKTCEVSAKDQTYALYNLTQAQLAHTLMPVGDYNKEEI 180

Query: 181 WKLAQDIGGQ 190
            ++A  IG  
Sbjct: 181 REIASKIGLP 190


>gi|126737635|ref|ZP_01753365.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Roseobacter sp. SK209-2-6]
 gi|126721028|gb|EBA17732.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Roseobacter sp. SK209-2-6]
          Length = 381

 Score = 54.9 bits (130), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/184 (11%), Positives = 48/184 (26%), Gaps = 6/184 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   ++  D+   V  ++   Y     +  +   C    I +     +
Sbjct: 22  RVVVAMSGGVDSSVVAAYLADQGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDARRVAE 81

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +     ++L    +   +      +  +                   L+  A        
Sbjct: 82  ERGFPHYVLDYENIFKDAVIDEFADSYLAGATPVPCIRCNERVKFKDLLETAKDLEA-DC 140

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL----KKYETWKLA 184
                 +        P+         + +  L   +   +      L     K  T ++A
Sbjct: 141 MATGHYIQRMMGEQGPELHSAEDANRDQSYFLFSTTPEQLDYLRFPLGHLPSKDATREMA 200

Query: 185 QDIG 188
              G
Sbjct: 201 AQYG 204


>gi|81241404|gb|ABB62114.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
          Length = 383

 Score = 54.9 bits (130), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 16  MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 73

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 74  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 131

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 132 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAKSLFPVGELEKP 191

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 192 QVRKIAEDLG 201


>gi|317402803|gb|EFV83347.1| tRNA-specific 2-thiouridylase mnmA [Achromobacter xylosoxidans C54]
          Length = 372

 Score = 54.9 bits (130), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 48/198 (24%), Gaps = 15/198 (7%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+    K    ++  SGG DSS        +   V  L     + +     C     + +
Sbjct: 1   MSQTSTKKGRVVVGMSGGVDSSVTAWLLKQQGYEVVGLFMKNWEDDDDSEYCSTR--QDL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           ++          E   +            +      +      PN  V     I      
Sbjct: 59  LDAASVADLVGVEFEYVN---FAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFL 115

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTI----------RAIETAINLGMESHVTVHT 170
             A  LG  +I  G          +                        L          
Sbjct: 116 DHAMALGAEHIATGHYARVREVAAEGGGSRFELLKALDGSKDQSYFLHRLNQAQLSRTLF 175

Query: 171 PLMWLKKYETWKLAQDIG 188
           PL  + K E  ++A +IG
Sbjct: 176 PLGEIHKTEVRRIAHEIG 193


>gi|317472707|ref|ZP_07932022.1| tRNA methyl transferase [Anaerostipes sp. 3_2_56FAA]
 gi|316899884|gb|EFV21883.1| tRNA methyl transferase [Anaerostipes sp. 3_2_56FAA]
          Length = 301

 Score = 54.9 bits (130), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 46/187 (24%), Gaps = 6/187 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS       ++   V  ++    Q  + EL         +  +   
Sbjct: 1   MKEKVVVGMSGGVDSSVAAYLLKEQGYEVIGVTMQIWQDEEQELLEENGGCCGLSAVDDA 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            + +   D    +          +      +  D   PN  +     +        +  +
Sbjct: 61  RRVAQALDIPYYVMNFKQDFKEHVIDYFIDEYLDGRTPNPCIACNRYVKWESLLKRSLDI 120

Query: 127 GITNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           G   I  G                              NL          P+    K E 
Sbjct: 121 GADYIATGHYARIEKLSNGRYALKRSATPEKDQTYALYNLTQNQLSKTLMPVGEYTKDEI 180

Query: 181 WKLAQDI 187
            ++A+ I
Sbjct: 181 REIAEKI 187


>gi|329943107|ref|ZP_08291881.1| tRNA(Ile)-lysidine synthetase [Chlamydophila psittaci Cal10]
 gi|332287689|ref|YP_004422590.1| tRNA(Ile)-lysidine synthetase [Chlamydophila psittaci 6BC]
 gi|325506432|gb|ADZ18070.1| tRNA(Ile)-lysidine synthetase [Chlamydophila psittaci 6BC]
 gi|328814654|gb|EGF84644.1| tRNA(Ile)-lysidine synthetase [Chlamydophila psittaci Cal10]
          Length = 317

 Score = 54.9 bits (130), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 23/67 (34%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          +    S LL  SGG DS   L     R      +  DYG R     E      +   E +
Sbjct: 19 LDMKKSYLLALSGGSDSLFLLYLLKSRGVSFTAVHVDYGWRESSYREAEELKLRCQEEGV 78

Query: 65 PKWKDSL 71
          P   + +
Sbjct: 79 PLIVNHV 85


>gi|315122753|ref|YP_004063242.1| tRNA-specific 2-thiouridylase MnmA [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313496155|gb|ADR52754.1| tRNA-specific 2-thiouridylase MnmA [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 398

 Score = 54.9 bits (130), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 44/141 (31%), Gaps = 8/141 (5%)

Query: 1   MNDI-IKKAPS---ALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLC 55
           MN +   K P     ++  SGG DSS   +        V  ++   Y    + + +   C
Sbjct: 1   MNSLDFDKNPKDMRVVVAMSGGVDSSIVAALLKRDGYDVVGVTLQLYNGGKESKRKGSCC 60

Query: 56  VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
             + + +            ++       +  H+++    A        P   V     + 
Sbjct: 61  AGQDVYDARRVCDAIDVPHYVFD---YEERFHNAVIVPFANAYIAGETPLPCVDCNRTVK 117

Query: 116 LVFAATLAYRLGITNIVIGVC 136
            +   ++  RLG   +  G  
Sbjct: 118 FLDLLSVMRRLGADVLATGHY 138


>gi|161950103|ref|YP_403605.2| tRNA-specific 2-thiouridylase MnmA [Shigella dysenteriae Sd197]
 gi|309788203|ref|ZP_07682809.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shigella dysenteriae 1617]
 gi|205821961|sp|Q32EZ1|MNMA_SHIDS RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|308924055|gb|EFP69556.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shigella dysenteriae 1617]
          Length = 368

 Score = 54.9 bits (130), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAKSLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 177 QVRKIAEDLG 186


>gi|91776467|ref|YP_546223.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylobacillus flagellatus KT]
 gi|123254088|sp|Q1GZF5|MNMA_METFK RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|91710454|gb|ABE50382.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylobacillus flagellatus KT]
          Length = 360

 Score = 54.9 bits (130), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 47/193 (24%), Gaps = 18/193 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--------RLCVRK 58
                ++  SGG DSS       ++   V  L     + +  +  C           V  
Sbjct: 1   MKKKVIVGMSGGVDSSVAALLLKEQGYEVVGLFMKNWEDDDTDEYCPAKQDLIDAAAVAD 60

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN-IIFLV 117
           KI   +     S      +    L + S         +   +                L+
Sbjct: 61  KIGIELEAVNFSKEYKERVFANFLEEYSAGRTPNPDILCNSEIKFKAFLDHAMALGGDLM 120

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                A       +   +   D +         +   + +  L          PL  L K
Sbjct: 121 ATGHYAQVREKNGLFQLMKADDGTKDQSYFLYRLNQAQLSKTL---------FPLGHLLK 171

Query: 178 YETWKLAQDIGGQ 190
            E   +A+  G  
Sbjct: 172 REIRDIARRAGLP 184


>gi|15643726|ref|NP_228774.1| hypothetical protein TM0966 [Thermotoga maritima MSB8]
 gi|222100584|ref|YP_002535152.1| PP-loop domain protein [Thermotoga neapolitana DSM 4359]
 gi|4981504|gb|AAD36045.1|AE001759_9 conserved hypothetical protein [Thermotoga maritima MSB8]
 gi|221572974|gb|ACM23786.1| PP-loop domain protein [Thermotoga neapolitana DSM 4359]
          Length = 268

 Score = 54.9 bits (130), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 49/172 (28%), Gaps = 5/172 (2%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           ++ IK     +++FSGG DS+     A +        L+ D     + E+E    +   I
Sbjct: 8   SEAIKSKKKLVVMFSGGVDSTLLAKLAREVLGKNAVALTIDSPVIPRKEIEEAKNLANLI 67

Query: 61  VELMPKWKDS-LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                  + + L   H++            L  N+       N  +    G N   L   
Sbjct: 68  GIRHEFIELNELKSRHLIENPPDRCYLCRKLRDNIVKNWARENGFDVIADGLNFSDLQDY 127

Query: 120 ATLAY---RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV 168
                     GI +  I    T        +   +   +      + S    
Sbjct: 128 RPGVKASTEDGIWHPFIDFEVTKEEIREYSKKLGLPTWDKPAMACLCSRFPY 179


>gi|186681209|ref|YP_001864405.1| GMP synthase [Nostoc punctiforme PCC 73102]
 gi|226739650|sp|B2J9G3|GUAA_NOSP7 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|186463661|gb|ACC79462.1| GMP synthase, large subunit [Nostoc punctiforme PCC 73102]
          Length = 540

 Score = 54.9 bits (130), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 55/187 (29%), Gaps = 11/187 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSST          +++  +  D G   K E E    + K   E    
Sbjct: 236 EKRVLLALSGGVDSSTLAFLLYKAIGEQLTCVFIDQGFMRKYEPE---RLVKLFQEQFHI 292

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             + +             ++  +   +   K +        V       L     LA   
Sbjct: 293 PVEYVNARDRF-------LAKVAGVTDPEEKRRRIGHEFINVFEETSKRLGHFDYLAQGT 345

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
              +++            +     I++      L  +    +  PL  L K E  K+ + 
Sbjct: 346 LYPDVIESADTNADPQTGERVAVKIKSHHNVGGLPKDLRFKLVEPLRKLFKDEVRKVGRS 405

Query: 187 IGGQDLV 193
           IG  + +
Sbjct: 406 IGLPEEI 412


>gi|295104304|emb|CBL01848.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Faecalibacterium prausnitzii SL3/3]
          Length = 367

 Score = 54.9 bits (130), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 54/189 (28%), Gaps = 10/189 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMP 65
             P AL+  SGG DSS               ++          +   + C  +K +E   
Sbjct: 8   NRPHALIAMSGGVDSSVAACLMQQAGYDCTGITMRLTHNETLGQSGYQTCCSEKDIEDAA 67

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +   +L   + +          + + +      +    PN  +     +        A  
Sbjct: 68  EVAFALDMPYQV--LDFTADFRAQIIEKFIRVYEAGGTPNPCIDCNKYMKFRHLLDWAEE 125

Query: 126 LGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            G+  +V G            R        +         NL  E    +  PL  L K 
Sbjct: 126 HGMEYVVTGHYARVEQDAATGRWLLKKGLDEGKDQSYVLYNLTQEQLAHIRLPLGALHKT 185

Query: 179 ETWKLAQDI 187
           E  K+AQ+ 
Sbjct: 186 EVRKIAQEH 194


>gi|262306045|gb|ACY45615.1| gln amidotransferase [Euperipatoides rowelli]
          Length = 197

 Score = 54.9 bits (130), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 2/65 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K    L+L SGG DS+ C +      + D+V  +  D G   K E E       KI   +
Sbjct: 42  KDNKVLMLVSGGVDSTVCAALLHKALKEDQVIAVHIDNGFMRKKESEQVEKSLNKIGLKL 101

Query: 65  PKWKD 69
                
Sbjct: 102 KVVNG 106


>gi|85059063|ref|YP_454765.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sodalis glossinidius str. 'morsitans']
 gi|123519587|sp|Q2NU15|MNMA_SODGM RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|84779583|dbj|BAE74360.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Sodalis glossinidius str. 'morsitans']
          Length = 369

 Score = 54.9 bits (130), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 60/221 (27%), Gaps = 13/221 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  RVE L     + +  E  C       +
Sbjct: 1   MSD--NGQKKVIVGMSGGVDSSVSAWLLQQQGYRVEGLFMKNWEEDDNEEYC--TAASDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +            H +      +   +     +A            +  + I F  F  
Sbjct: 57  ADARAVCDTLGIALHTVN--FAAEYWDNVFAHFLAEYQVGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
                LG   I  G            R      D          LG         P+  L
Sbjct: 115 FADDDLGADYIATGHYVRRADVNGKSRLLRGLDDNKDQSYFLYTLGHAQLARCLFPIGEL 174

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGY 216
            K E  ++A D+G              C++G+R  R   G 
Sbjct: 175 AKPEVRRIAADLGLATAAKKDSTGI--CFIGERKFRDFLGR 213


>gi|326470757|gb|EGD94766.1| argininosuccinate synthase [Trichophyton tonsurans CBS 112818]
          Length = 412

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 37/101 (36%), Gaps = 3/101 (2%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + +    LL +SGG D+S  L+W L++   V     D GQ    + +        +    
Sbjct: 1   MAQKEKVLLAYSGGLDTSCILAWLLEQGHEVVCFLADVGQ--AEDFKEAERKALAVGA-K 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN 105
               + L ++ +  L       ++  + + A  +    +  
Sbjct: 58  KLVVEDLKKEFVEDLCFKAIQCNTDTSSDDARPVIARAMMR 98


>gi|325275197|ref|ZP_08141164.1| argininosuccinate synthase [Pseudomonas sp. TJI-51]
 gi|324099684|gb|EGB97563.1| argininosuccinate synthase [Pseudomonas sp. TJI-51]
          Length = 405

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 59/205 (28%), Gaps = 13/205 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MADVKKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +         + T      +   ++    +  R I         A
Sbjct: 61  ------YIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN------LGMESHVTVHTPLMWLKK 177
              G T         +   Y       + A     +      L   +           KK
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHGIPIERHGKK 174

Query: 178 YETWKLAQDIGGQDLVNLILEESHT 202
              + +  ++        +LE++ T
Sbjct: 175 KSPYSMDANLLHISYEGGVLEDTWT 199


>gi|293414424|ref|ZP_06657073.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli B185]
 gi|291434482|gb|EFF07455.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli B185]
          Length = 368

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRVDVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 177 QVRKIAEDLG 186


>gi|226329089|ref|ZP_03804607.1| hypothetical protein PROPEN_02992 [Proteus penneri ATCC 35198]
 gi|225202275|gb|EEG84629.1| hypothetical protein PROPEN_02992 [Proteus penneri ATCC 35198]
          Length = 483

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 54/182 (29%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGYDSGVSSYMLMRRGSRVHYCFFNLGG-------SAHEI--GVKQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +              + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGRSHKVHFVA-------VDFEPVVAEILEKVDDGQMGVVLKRMMVRAASRVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I      +         +  PL+   K     +A+ IG +
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDNATDTL---------ILRPLITHDKENIINIARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|170720303|ref|YP_001747991.1| argininosuccinate synthase [Pseudomonas putida W619]
 gi|229889895|sp|B1J4I4|ASSY_PSEPW RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|169758306|gb|ACA71622.1| Argininosuccinate synthase [Pseudomonas putida W619]
          Length = 405

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 59/205 (28%), Gaps = 13/205 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MADVKKVVLAYSGGLDTSVILKWLQDTYDCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +         + T      +   ++    +  R I         A
Sbjct: 61  ------YIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN------LGMESHVTVHTPLMWLKK 177
              G T         +   Y       + A     +      L   +           KK
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHGIPIERHGKK 174

Query: 178 YETWKLAQDIGGQDLVNLILEESHT 202
              + +  ++        +LE++ T
Sbjct: 175 KSPYSMDANLLHISYEGGVLEDTWT 199


>gi|87118398|ref|ZP_01074297.1| argininosuccinate synthase [Marinomonas sp. MED121]
 gi|86166032|gb|EAQ67298.1| argininosuccinate synthase [Marinomonas sp. MED121]
          Length = 410

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 54/178 (30%), Gaps = 14/178 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  + W  + +   V T + D GQ  +VE          I E+
Sbjct: 1   MSDVKKVVLAYSGGLDTSVIVKWLQEEYQCEVVTFTADLGQGEEVEPARAKAQALGIKEI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                ++    D + P+         + T      +   ++    +  R I         
Sbjct: 61  YIEDLREEFVRDFVFPM-------FRANTIYEGEYLLGTSIARPLIAKRLIEIANETGAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           A   G T         +   Y       + A     +L     +  +       K+E 
Sbjct: 114 AISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLTSRETLMAYCE-----KHEI 166


>gi|26987824|ref|NP_743249.1| argininosuccinate synthase [Pseudomonas putida KT2440]
 gi|104780418|ref|YP_606916.1| argininosuccinate synthase [Pseudomonas entomophila L48]
 gi|148546372|ref|YP_001266474.1| argininosuccinate synthase [Pseudomonas putida F1]
 gi|30172776|sp|P59604|ASSY_PSEPK RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|166221008|sp|Q1IE03|ASSY_PSEE4 RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|166221010|sp|A5VZI0|ASSY_PSEP1 RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|24982523|gb|AAN66713.1|AE016299_9 argininosuccinate synthase [Pseudomonas putida KT2440]
 gi|95109405|emb|CAK14105.1| putative argininosuccinate synthase [Pseudomonas entomophila L48]
 gi|148510430|gb|ABQ77290.1| argininosuccinate synthase [Pseudomonas putida F1]
 gi|313497454|gb|ADR58820.1| ArgG [Pseudomonas putida BIRD-1]
          Length = 405

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 59/205 (28%), Gaps = 13/205 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MADVKKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +         + T      +   ++    +  R I         A
Sbjct: 61  ------YIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN------LGMESHVTVHTPLMWLKK 177
              G T         +   Y       + A     +      L   +           KK
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHGIPIERHGKK 174

Query: 178 YETWKLAQDIGGQDLVNLILEESHT 202
              + +  ++        +LE++ T
Sbjct: 175 KSPYSMDANLLHISYEGGVLEDTWT 199


>gi|312966389|ref|ZP_07780611.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli 2362-75]
 gi|312288842|gb|EFR16740.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli 2362-75]
          Length = 368

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSETAKKVIVGISGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 177 QVRKIAEDLG 186


>gi|293409499|ref|ZP_06653075.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli B354]
 gi|291469967|gb|EFF12451.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli B354]
          Length = 395

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 28  MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 85

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 86  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 143

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 144 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 203

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 204 QVRKIAEDLG 213


>gi|304397251|ref|ZP_07379130.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pantoea sp. aB]
 gi|304355400|gb|EFM19768.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pantoea sp. aB]
          Length = 370

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 53/200 (26%), Gaps = 27/200 (13%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC-------- 52
           M+D        ++  SGG DSS        +  +VE L     + +  E  C        
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAADDLAD 58

Query: 53  RLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN 112
              V  K+   + K                 +   +     +             +  + 
Sbjct: 59  AQAVCDKLGMKLHKVN------------FAAEYWDNVFEHFLEEYKAGRTPNPDILCNKE 106

Query: 113 IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVT 167
           I F  F    A  LG   I  G     +      +                 L  +    
Sbjct: 107 IKFKAFLEFAAEDLGADFIATGHYVRRHDVDGQSQLLRGLDGNKDQSYFLYTLSHQQIAQ 166

Query: 168 VHTPLMWLKKYETWKLAQDI 187
              P+  L+K E  ++A+ +
Sbjct: 167 SLFPVGELEKPEVRRIAEQL 186


>gi|197284009|ref|YP_002149881.1| thiamine biosynthesis protein ThiI [Proteus mirabilis HI4320]
 gi|227358121|ref|ZP_03842462.1| thiamine biosynthesis protein [Proteus mirabilis ATCC 29906]
 gi|238693151|sp|B4EU34|THII_PROMH RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|194681496|emb|CAR40360.1| thiamine biosynthesis protein [Proteus mirabilis HI4320]
 gi|227161457|gb|EEI46494.1| thiamine biosynthesis protein [Proteus mirabilis ATCC 29906]
          Length = 483

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 54/182 (29%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGYDSGVSSYMLMRRGSRVHYCFFNLGG-------SAHEI--GVKQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +              + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGRSHKVHFVA-------VDFEPVVAEILEKIDDGQMGVVLKRMMVRAASRVAERYGVQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I      +         +  PL+   K     +A+ IG +
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDNATDTL---------ILRPLITHDKENIINIARQIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|312881247|ref|ZP_07741045.1| tRNA-specific 2-thiouridylase MnmA [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309371139|gb|EFP98593.1| tRNA-specific 2-thiouridylase MnmA [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 369

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 54/195 (27%), Gaps = 13/195 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M++        ++  SGG DSS        +  +VE L     + +  E  C     + +
Sbjct: 1   MSE--NSKKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEDYC--TAAEDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +            H +      +   +     +A            +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIHLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLD 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDT-------IRAIETAINLGMESHVTVHTPLM 173
                L    I +G          D +                   L  E       P+ 
Sbjct: 115 FADDVLEADYIAMGHYVRRSCIESDQKPQMLRGLDGNKDQSYFLYTLSHEQIGRSLFPVG 174

Query: 174 WLKKYETWKLAQDIG 188
            L+K E  ++A++ G
Sbjct: 175 ELEKPEVRRIAEEQG 189


>gi|332652624|ref|ZP_08418369.1| GMP synthase, C- domain protein [Ruminococcaceae bacterium D16]
 gi|332517770|gb|EGJ47373.1| GMP synthase, C- domain protein [Ruminococcaceae bacterium D16]
          Length = 429

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 60/186 (32%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +  +     ++  +  ++G   K E E  + V +  ++    +
Sbjct: 135 KKVLLALSGGVDSSVVAALLIKAIGKQLTCVHVNHGLLRKGEPEQVVKVFRDEMDANLVY 194

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D++          L  ++  S  +     I    +       R +             G
Sbjct: 195 VDAVDR-------FLDKLAGVSDPEQKRKIIGGEFIRVFEEEARKL------------EG 235

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I+ +  G    D           +++      L  + +  +  PL  L K E     + +
Sbjct: 236 ISFLGQGTIYPDIIESGTKTVKAVKSHHNVGGLPEDLNFELVEPLKMLFKDEVRACGKAL 295

Query: 188 GGQDLV 193
           G  D +
Sbjct: 296 GLPDSM 301


>gi|120436568|ref|YP_862254.1| tRNA methyl transferase [Gramella forsetii KT0803]
 gi|205816859|sp|A0M3J2|MNMA_GRAFK RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|117578718|emb|CAL67187.1| tRNA methyl transferase [Gramella forsetii KT0803]
          Length = 395

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 34/132 (25%), Gaps = 3/132 (2%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS       ++   V  L       + V +           + M    
Sbjct: 2   KKVVVGLSGGVDSSVSAYLLKEQGYEVIGLFMKNWHDDSVTISDECPWLDDSNDAMMVAD 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   +    L +     +   +  + +    PN  V     I       +A  LG 
Sbjct: 62  KLGIPFQTVD---LSEQYKERIVDYMFNEYEKGRTPNPDVLCNREIKFDVFMKIALSLGA 118

Query: 129 TNIVIGVCETDY 140
             +  G      
Sbjct: 119 DYVATGHYCRKA 130


>gi|14590222|ref|NP_142287.1| hypothetical protein PH0300 [Pyrococcus horikoshii OT3]
 gi|3256690|dbj|BAA29373.1| 310aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 310

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 2/71 (2%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--QRNKVELECRLCVRKK 59
             ++ K    L+  SGG+DS+            +E L  + G    ++   E      K 
Sbjct: 41  YKLLTKDERILVAVSGGKDSAVTAYVLKKLGYNIECLHINLGISGYSEKSEEYAKKQCKL 100

Query: 60  IVELMPKWKDS 70
           I   +   +  
Sbjct: 101 IGAPLHIVRIK 111


>gi|296272288|ref|YP_003654919.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Arcobacter nitrofigilis DSM 7299]
 gi|296096463|gb|ADG92413.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Arcobacter nitrofigilis DSM 7299]
          Length = 376

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 55/187 (29%), Gaps = 18/187 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV----RKKIVEL 63
               ++  SGG DSS        +   V  L     +      +C   +     KK+ EL
Sbjct: 12  KKKVVVGMSGGVDSSVTALLLKQQGYDVIGLFMRNWEYGIKGSQCPNRIEFEDAKKVGEL 71

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +    + LG+D +       +   + +       ++    PN  +     I        A
Sbjct: 72  IGI--EVLGKDFV-------EEYRTKVFDVFLEGLKKGLTPNPDILCNREIKFNVFLNEA 122

Query: 124 YRLGITNIVIGVCETDYSGYPDC-----RHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            ++G   I  G                 +  +         L  E       PL  L K 
Sbjct: 123 KKMGADVIATGHYAKIAKYKDHYVLDTPKDSSKDQSYFLHALSSEQLSHAMFPLGDLTKK 182

Query: 179 ETWKLAQ 185
           E  ++A+
Sbjct: 183 EVREIAR 189


>gi|315497620|ref|YP_004086424.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Asticcacaulis excentricus CB 48]
 gi|315415632|gb|ADU12273.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Asticcacaulis excentricus CB 48]
          Length = 402

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 54/192 (28%), Gaps = 13/192 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIV 61
           + +    +   SGG DSS   +        V  ++   +D+GQ  K       C  + I 
Sbjct: 31  LSQGARVVAAMSGGVDSSVAAALLHAAGYEVIGVTLQLYDHGQALKKTG--ACCAGQDIH 88

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +     +      ++L           S+ +  A        P   +     +       
Sbjct: 89  DARVAAEKIGIAHYVLD---YESRFKDSVIEEFADSYLRGETPVPCIRCNQTVKFRDLLD 145

Query: 122 LAYRLGITNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
           +A  LG   +     V      + +                     E    +  PL  + 
Sbjct: 146 VARDLGAEAMATGHYVERRDTGNRAELRRAIDRNRDQSYFLFATTREQLDFLRFPLADIP 205

Query: 177 KYETWKLAQDIG 188
           K +   +A+ +G
Sbjct: 206 KPQVRDIARQMG 217


>gi|253702333|ref|YP_003023522.1| argininosuccinate synthase [Geobacter sp. M21]
 gi|259585360|sp|C6E6Y6|ASSY_GEOSM RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|251777183|gb|ACT19764.1| argininosuccinate synthase [Geobacter sp. M21]
          Length = 406

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 64/204 (31%), Gaps = 17/204 (8%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCV---RKKIV 61
           K+    +L +SGG D+S  L W  +     V T S D GQ +++E            K+ 
Sbjct: 4   KEVKKIVLAYSGGLDTSIILKWLKNEYGCEVVTFSADLGQGDELEPVREKAFKTGADKV- 62

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
             +   ++    D + P+     I   S     ++           +  R +        
Sbjct: 63  -YIDDLREEFVRDFVFPMFRANAIYEGSYLLGTSIARP-------LIAKRQMEIAQIEGC 114

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP----LMWLKK 177
            A   G T         + + Y      T+ A      L     +  +       + + K
Sbjct: 115 DAVSHGATGKGNDQVRFELAYYHFNPGITVVAPWREWKLNSRQALINYAKRNDIPIPITK 174

Query: 178 YETWKLAQDIGGQDLVNLILEESH 201
              W   +++        ILE++ 
Sbjct: 175 KRPWSSDRNLLHISFEGGILEDTW 198


>gi|189219049|ref|YP_001939690.1| tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase
           [Methylacidiphilum infernorum V4]
 gi|189185907|gb|ACD83092.1| tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase
           [Methylacidiphilum infernorum V4]
          Length = 367

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 50/192 (26%), Gaps = 4/192 (2%)

Query: 1   MN-DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV-RK 58
           MN   IKK    ++  SGG DS+            V  ++        + +    C    
Sbjct: 3   MNVAPIKKNTRIVVGMSGGVDSTVAAYLLKREGFDVVGITLKIWTDRCMHISSEKCCGPD 62

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
            I +            ++L  A   +    S         +  N             L  
Sbjct: 63  AINDARNMAAQIGIPHYVLDEADCFEKEVISYFLREYSLGRTPNPCVKCNEKIKFGRLWT 122

Query: 119 AATL--AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
                    L   +  +   +         +           +L       + TPL  L+
Sbjct: 123 RVQSWGVEYLATGHYALVENQDHIPRLKKAKDKRRDQSYFLFSLSAGQLSRMITPLGNLE 182

Query: 177 KYETWKLAQDIG 188
           K E   +A++ G
Sbjct: 183 KKEVRAIAKEAG 194


>gi|154503928|ref|ZP_02040988.1| hypothetical protein RUMGNA_01754 [Ruminococcus gnavus ATCC 29149]
 gi|153795527|gb|EDN77947.1| hypothetical protein RUMGNA_01754 [Ruminococcus gnavus ATCC 29149]
          Length = 356

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 52/184 (28%), Gaps = 6/184 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS       ++   V  ++    Q  +   +        +  +    + 
Sbjct: 3   KVVVGMSGGVDSSVAAYLLKEQGYDVIGVTMQIWQDEEQAAQEENGGCCGLSAVDDARRV 62

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +   +    +         ++      + Q+   PN  +     +        +  +G  
Sbjct: 63  AAALEIPYYVMNFKKEFKENVIDYFVEEYQNGRTPNPCIACNRYVKWESLLQRSLSIGAE 122

Query: 130 NIVIGVCETDY---SGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW---LKKYETWKL 183
            I  G         +G    R     A +    L   +   +   LM      K E   +
Sbjct: 123 YIATGHYARVVQLENGRYTLRRSATLAKDQTYALYNLTQEQLKRTLMPVGKYTKDEVRAI 182

Query: 184 AQDI 187
           A+ I
Sbjct: 183 AEKI 186


>gi|73668265|ref|YP_304280.1| hypothetical protein Mbar_A0722 [Methanosarcina barkeri str.
           Fusaro]
 gi|72395427|gb|AAZ69700.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 272

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 60/186 (32%), Gaps = 32/186 (17%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           + IK   SA++ FSGG DS+T  + A +   ++   ++ +     K +LE  +    +I 
Sbjct: 11  EAIKARESAVIAFSGGVDSATLAALAFEVLGEKALAVTINSPLFPKKQLETAVETACEIG 70

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                      E  IL  + L     S+ T N                      L     
Sbjct: 71  ----------IEHKILSFSQLSLPYFSANTLN-------------RCYFCKKALLETLLD 107

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            A + G   ++ G   ++  G     +  ++             +        + K E  
Sbjct: 108 FAEKAGYNAVLEGTNSSEIHGENRPGYRAVQEAGEK--------IYSPFVEFNVTKDEIR 159

Query: 182 KLAQDI 187
           ++A  +
Sbjct: 160 EVASKL 165


>gi|88811454|ref|ZP_01126709.1| argininosuccinate synthase [Nitrococcus mobilis Nb-231]
 gi|88791343|gb|EAR22455.1| argininosuccinate synthase [Nitrococcus mobilis Nb-231]
          Length = 404

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 49/158 (31%), Gaps = 9/158 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W ++     V T + D GQ  ++E          + ++
Sbjct: 1   MSDVKKVVLAYSGGLDTSVILHWLVETYGCEVVTFTADLGQGEELEPARSKAKAFGVKQI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                ++    D + P+     +         ++           +  R +     +   
Sbjct: 61  YIEDLREEFVRDFVFPMFRANALYEGEYLLGTSIARP-------LIAKRQVQIAHESGAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         +   Y    +  + A     +L
Sbjct: 114 AVAHGATGKGNDQVRFELGYYGLDPNIKVIAPWREWDL 151


>gi|331703443|ref|YP_004400130.1| tRNA(5 methylaminomethyl 2 thiouridylate) methyltransferase
           [Mycoplasma mycoides subsp. capri LC str. 95010]
 gi|328801998|emb|CBW54152.1| tRNA(5 methylaminomethyl 2 thiouridylate) methyltransferase
           [Mycoplasma mycoides subsp. capri LC str. 95010]
          Length = 384

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 46/198 (23%), Gaps = 23/198 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN------------------KV 48
                ++  SGG DSS      L +   VE L                          + 
Sbjct: 10  MKQKVVVGLSGGVDSSVACYLLLQQGYEVEGLFMRNWDSATNNDILGNTNINNDICPQEQ 69

Query: 49  ELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFV 108
           +      V  K+   + +  D + E      +   +    + T N  +        + F+
Sbjct: 70  DFLDAKAVADKLNIKLHRV-DFIKEYWDYVFSYFIEEYKKARTPNPDILCNKYIKFDKFL 128

Query: 109 PGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV 168
                        +    G    V     T                     L        
Sbjct: 129 NYAINQLNADYIAM----GHYAKVEFNKTTKQYELIKASDTNKDQTYFLSQLNQNQLSKT 184

Query: 169 HTPLMWLKKYETWKLAQD 186
             PL  L K +  K+A +
Sbjct: 185 LFPLANLTKEQVRKIALE 202


>gi|261405437|ref|YP_003241678.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Paenibacillus sp. Y412MC10]
 gi|261281900|gb|ACX63871.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Paenibacillus sp. Y412MC10]
          Length = 375

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 49/199 (24%), Gaps = 15/199 (7%)

Query: 1   MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCV 56
           M   + K       ++  SGG DSS        +   V  +   ++   +++        
Sbjct: 3   MVITMSKEKHNTRIVVGMSGGVDSSVTALLLKQQGYEVIGIFMKNWDDTDELGYCTAEAD 62

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
            + +  +  +            +    +      +  +             +  R  I  
Sbjct: 63  AEDVRRVCEQLDIPYYT-----VNFEKEYFDKVFSYFLDEYKAGRTPNPDVMCNRE-IKF 116

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTP 171
                 A  LG   +  G            R                 L  E       P
Sbjct: 117 GEFLNKAMDLGADYVATGHYARVIEEDGQYRLLRGVDSNKDQTYFLNALSQEQLAKAMFP 176

Query: 172 LMWLKKYETWKLAQDIGGQ 190
           +  L K E  +LA++ G  
Sbjct: 177 IGHLPKPEVRRLAEEAGLY 195


>gi|166367576|ref|YP_001659849.1| tRNA-specific 2-thiouridylase MnmA [Microcystis aeruginosa
           NIES-843]
 gi|205816884|sp|B0JVR4|MNMA_MICAN RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|166089949|dbj|BAG04657.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Microcystis aeruginosa NIES-843]
          Length = 352

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 52/187 (27%), Gaps = 17/187 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS   +    +   V  L+        +      C  + +V+     + 
Sbjct: 3   KVVVGLSGGVDSSVAAAALHAQGYDVIGLTL------WLMKGKGQCCSEGMVDAAFICEQ 56

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA-YRLGI 128
                HI+    L          +     +    P         +        A   L  
Sbjct: 57  LGVPHHIVDSRELFQKEIIDYLVS---GYEAGITPLPCSQCNKAVKFSPMLHYARETLQT 113

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL-------KKYETW 181
             I  G          + R+  +RA++   +     +      L           K ET 
Sbjct: 114 DTIATGHYARIRFSPENNRYQLLRAVDQNKDQSYFLYDLTQDVLRGTLFPLGEQTKAETR 173

Query: 182 KLAQDIG 188
           ++AQ+ G
Sbjct: 174 RIAQEFG 180


>gi|42521055|ref|NP_966970.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Wolbachia endosymbiont of Drosophila melanogaster]
 gi|81652123|sp|Q73FR5|MNMA_WOLPM RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|42410796|gb|AAS14904.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Wolbachia endosymbiont of Drosophila melanogaster]
          Length = 370

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 57/182 (31%), Gaps = 8/182 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
            A++  SGG DSS   +   +   +V  ++   YG           C   + +    +  
Sbjct: 20  KAVVAMSGGVDSSVAAALLHNLGYKVVGVTLQLYGTDGNANARKGACCAGQDIYDAKRVA 79

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +S+G  H   L    +I    + ++ A        P   V     +       +   LG 
Sbjct: 80  ESVGFPH--YLLNYEEIFKKEVIEDFASTYMRGETPIPCVRCNQTVKFRDLLQVTKNLGA 137

Query: 129 TNIVIGVC----ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM-WLKKYETWKL 183
             +V G      E +         D  +     +    +  + +    +    K +  KL
Sbjct: 138 DVLVTGHYVRRLEKNGEVKLCRSIDKSKDQSYFLFATTQEQLKLLRFPLGGFYKSDIRKL 197

Query: 184 AQ 185
           A+
Sbjct: 198 AK 199


>gi|192358816|ref|YP_001983984.1| thiamine biosynthesis protein ThiI [Cellvibrio japonicus Ueda107]
 gi|190684981|gb|ACE82659.1| thiazole biosynthesis protein ThiI [Cellvibrio japonicus Ueda107]
          Length = 491

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS+      + R  R     F+ G R          +   + E+     + 
Sbjct: 182 VLSLISGGFDSTVSTYLCIKRGLRAHYCFFNLGGR-------AHEI--GVKEVAYYLWNK 232

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +          +   + V  +I +             + L  A  +A  L I  
Sbjct: 233 YGASHRVKF-------VTVPFEEVVREILEKVDNAYMGVTLKRMMLRAAEKVAESLEIPA 285

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S       + I              + V  PL  + K +   +++ IG +
Sbjct: 286 LVTGESVAQVSSQTLINLNAIDRA---------IDMLVLRPLATMDKGDIIDISRKIGTE 336

Query: 191 DL 192
             
Sbjct: 337 SF 338


>gi|18310765|ref|NP_562699.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium perfringens str. 13]
 gi|18145446|dbj|BAB81489.1| probable tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium perfringens str. 13]
          Length = 350

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 56/203 (27%), Gaps = 12/203 (5%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVELMPKWKDSLG 72
            SGG DSS       ++   V  ++    Q +K   E     C    + +     +    
Sbjct: 1   MSGGVDSSVAAYLLKEQGYDVIGVTMQIWQEDKEYEEREGGCCSLSAVDDARRVAQKLDI 60

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
             ++L        +      +  ++ +  N     +     +        A  +G   + 
Sbjct: 61  PFYVLNFRDSFKRNVIDYFVDEYIQGRTPNPC---IACNKYLKFDELLQKAKGIGADYVA 117

Query: 133 IGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            G            +      D         NL  E       P     K +  ++A++I
Sbjct: 118 TGHYAKIEERDGRFQLIRSKDDRKDQTYALYNLTQEQLEHTLMPCGEFTKDKIREIAKEI 177

Query: 188 GGQDLVNLILEESHTCYLGKRDK 210
           G         EE   C++   + 
Sbjct: 178 GLDVHNKKDSEEI--CFIPDNNH 198


>gi|94499665|ref|ZP_01306202.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Oceanobacter sp. RED65]
 gi|94428419|gb|EAT13392.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Oceanobacter sp. RED65]
          Length = 369

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 53/193 (27%), Gaps = 10/193 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+         ++  SGG DSS      +++   VE L     + +     C    ++ +
Sbjct: 1   MSTESNVNTKVIVGMSGGVDSSVSAYLLMEQGYHVEGLFMKNWEEDDGTEYC--TAKEDL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          + H        +   +     +             +  R  I      
Sbjct: 59  ADAQAVCDKLGIKLH--SANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFKAFL 115

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G     Y             +          +G +       P+  L
Sbjct: 116 DYAKILGADYIATGHYVRRYEKDGSTYLLKGLDNNKDQSYFLHAVGEDEIKQTLFPVGEL 175

Query: 176 KKYETWKLAQDIG 188
           +K E  ++A++ G
Sbjct: 176 EKPEVRRIAEEQG 188


>gi|307545317|ref|YP_003897796.1| thiamine biosynthesis protein ThiI [Halomonas elongata DSM 2581]
 gi|307217341|emb|CBV42611.1| thiamine biosynthesis protein ThiI [Halomonas elongata DSM 2581]
          Length = 492

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 53/185 (28%), Gaps = 25/185 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  +   + F+ G          +            W+  
Sbjct: 183 VLSLISGGFDSPVAAWRMMRRGVKSHFVFFNLGGPAHEAGVREVT--------HHLWQRY 234

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
               ++  +++  +     + K +   +    L    V   + I        A R GI  
Sbjct: 235 SASHNVHFISVPFEGVIGEILKTIPDGLMGVVLKRMMVRAASRI--------AERAGIPA 286

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S          + +     +   S + +  PL+   K      A+ I   
Sbjct: 287 LVTGDAIAQVSS---------QTLSNLALIDDASPMPILRPLLTEDKQAIIDQARQIDTA 337

Query: 191 DLVNL 195
               +
Sbjct: 338 RHAEV 342


>gi|254430367|ref|ZP_05044070.1| GMP synthase [Cyanobium sp. PCC 7001]
 gi|197624820|gb|EDY37379.1| GMP synthase [Cyanobium sp. PCC 7001]
          Length = 548

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 51/191 (26%), Gaps = 19/191 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSST          D++  +  D G   K E E               
Sbjct: 244 EKRVLLALSGGVDSSTLAFLLHKAIGDQLTCMFIDQGFMRKGEPEF-------------- 289

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +   +   + +  +                ++          R              L
Sbjct: 290 LVEFFDKRFHINVEYINARERFLARLEGVTDPEEKRKLIGTEFIRVFEEESKRLGPFDYL 349

Query: 127 GITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
               +   V E+  +       +     I++      L  +    +  PL  L K E  K
Sbjct: 350 AQGTLYPDVIESAGTNVDPKTGERVAVKIKSHHNVGGLPKDLQFKLVEPLRKLFKDEVRK 409

Query: 183 LAQDIGGQDLV 193
           + + +G  + +
Sbjct: 410 VGRSLGLPEEI 420


>gi|167035317|ref|YP_001670548.1| argininosuccinate synthase [Pseudomonas putida GB-1]
 gi|189046399|sp|B0KUE7|ASSY_PSEPG RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|166861805|gb|ABZ00213.1| Argininosuccinate synthase [Pseudomonas putida GB-1]
          Length = 405

 Score = 54.9 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 59/205 (28%), Gaps = 13/205 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MADVKKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +         + T      +   ++    +  R I         A
Sbjct: 61  ------YIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANATGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN------LGMESHVTVHTPLMWLKK 177
              G T         +   Y       + A     +      L   +           KK
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHGIPIERHGKK 174

Query: 178 YETWKLAQDIGGQDLVNLILEESHT 202
              + +  ++        +LE++ T
Sbjct: 175 KSPYSMDANLLHISYEGGVLEDTWT 199


>gi|313665411|ref|YP_004047282.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycoplasma leachii PG50]
 gi|312949863|gb|ADR24459.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycoplasma leachii PG50]
          Length = 375

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 47/198 (23%), Gaps = 23/198 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN------------------KV 48
                ++  SGG DSS      L +   VE L                          + 
Sbjct: 1   MKQKVVVGLSGGVDSSVACYLLLQQGYEVEGLFMRNWDSATNNDILGNANINNDICPQEQ 60

Query: 49  ELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFV 108
           +      V  K+   + +  D + E      +   +    + T N  +        + F+
Sbjct: 61  DYLDAKAVADKLNIKLHRV-DFIKEYWDYVFSYFIEEYKKARTPNPDILCNKYIKFDKFL 119

Query: 109 PGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV 168
                        +    G    V     T+                    L  +     
Sbjct: 120 NYAINQLNADYIAM----GHYAKVEFNKTTNQYELIKASDTNKDQTYFLSQLNQKQLSKT 175

Query: 169 HTPLMWLKKYETWKLAQD 186
             PL  L K +  K+A  
Sbjct: 176 LFPLANLTKEQVRKIALK 193


>gi|307327693|ref|ZP_07606877.1| GMP synthase, large subunit [Streptomyces violaceusniger Tu 4113]
 gi|306886591|gb|EFN17593.1| GMP synthase, large subunit [Streptomyces violaceusniger Tu 4113]
          Length = 565

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 58/187 (31%), Gaps = 11/187 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              A+   SGG DS+   +       D++  +  D+G   K E E          ++   
Sbjct: 260 TKRAICGLSGGVDSAVAAALVQKAIGDQLTCVYVDHGLMRKGESE----------QVEKD 309

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  + G    +  A    +S  +   +   K +        V  +    LV  A  A   
Sbjct: 310 FVAATGVQLKVVEAEERFLSALAGVSDPEEKRKIIGREFIRVFEQAQAELVAEAGAAGED 369

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +               I++      L  +    +  PL  L K E   + Q+
Sbjct: 370 VEFLVQGTLYPDVVESGGGSGTANIKSHHNVGGLPDDIEFQLVEPLRRLFKDEVRMVGQE 429

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 430 LGLPDEI 436


>gi|294650884|ref|ZP_06728231.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acinetobacter haemolyticus ATCC 19194]
 gi|292823302|gb|EFF82158.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acinetobacter haemolyticus ATCC 19194]
          Length = 377

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 48/166 (28%), Gaps = 5/166 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS   +  L +  +VE L     + +     C     + + +    
Sbjct: 1   MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGLFMKNWEEDDGTEYC--TALEDLADAQAV 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H    A         + ++   +      PN  +     I        A  L
Sbjct: 59  ADKIGIKLHT---ANFAMEYWDRVFEHFLAEYAAGRTPNPDILCNKEIKFRAFLDHAMTL 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
           G   I  G      +   + R +T   +   ++   +    +H   
Sbjct: 116 GADFIATGHYARRGASMQNSRGETYAPLLRGVDNNKDQTYFLHAVH 161


>gi|170575385|ref|XP_001893218.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
          putative [Brugia malayi]
 gi|158600895|gb|EDP37948.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
          putative [Brugia malayi]
          Length = 383

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 15/43 (34%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK 47
          +K+    +   SGG DS+        R   V  +      R +
Sbjct: 1  MKQIRKVVCAISGGVDSAVSAYLLKKRGFDVIGVHMVNWDRAE 43


>gi|86138410|ref|ZP_01056984.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Roseobacter sp. MED193]
 gi|85824935|gb|EAQ45136.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Roseobacter sp. MED193]
          Length = 381

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/184 (10%), Positives = 47/184 (25%), Gaps = 6/184 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   ++  D+   V  ++   Y     +  +   C    I +     +
Sbjct: 22  RVVVAMSGGVDSSVVAAYLADQGYDVIGVTLQLYDHGAALAKKGACCAGIDIHDARRVAE 81

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +     ++L    +   +      +  +                   L+  A        
Sbjct: 82  ERGFPHYVLDYENIFKDAVIDEFADSYLAGATPVPCIRCNERVKFKDLLETARDLEA-DC 140

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL----KKYETWKLA 184
                 +         +         + +  L   +   +      L     K  T ++A
Sbjct: 141 MATGHYIQRKMGDNGAELHSAEDANRDQSYFLFSTTPEQLDYLRFPLGHLPSKDATREMA 200

Query: 185 QDIG 188
              G
Sbjct: 201 AQYG 204


>gi|257466420|ref|ZP_05630731.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
           [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917577|ref|ZP_07913817.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691452|gb|EFS28287.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium gonidiaformans ATCC 25563]
          Length = 350

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 53/177 (29%), Gaps = 17/177 (9%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +  SGG DSST       +   +  ++                  KK+ E      D   
Sbjct: 17  VALSGGVDSSTVAYLLKKQGYDIFGVTM-------KTCHAEDADAKKVCE------DLGI 63

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           + ++L L              V   ++        V  R  I            G   + 
Sbjct: 64  DHYVLDLTEPFSEKVMDYF--VEEYMRGKTPNPCMVCNR-HIKFGKLLDFILGQGAQYMA 120

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLAQDIG 188
            G       G+     D  +     ++   +  +  +  P+  L+K +  +LA+++G
Sbjct: 121 TGHYTKLVDGHLSVGDDGGKDQVYFLSQVPKEKLKKIIFPVGELEKTQVRELAKELG 177


>gi|85374397|ref|YP_458459.1| argininosuccinate synthase [Erythrobacter litoralis HTCC2594]
 gi|122544222|sp|Q2N9H9|ASSY_ERYLH RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|84787480|gb|ABC63662.1| argininosuccinate synthase [Erythrobacter litoralis HTCC2594]
          Length = 404

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 61/203 (30%), Gaps = 11/203 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S    W  ++R   V T + D GQ  ++E          I + 
Sbjct: 1   MPDIKRVVLAYSGGLDTSVIAKWLEVERGLEVVTFTADLGQGEELEPARAKAQAMGIPD- 59

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + + L E+ +            +  +     +   ++    +  R +         A
Sbjct: 60  KHIFIEDLREEFVRDYVF---PMMRANARYEGDYLLGTSIARPLISKRLVEIAQETGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              G T         + S Y       + A     +L   + +     + W +K++    
Sbjct: 117 IAHGATGKGNDQVRFELSAYALDPDIKVIAPWREWDLTSRTAL-----IAWAEKHQIQVP 171

Query: 184 AQDIGGQDLVNLILEESHTCYLG 206
               G            HT   G
Sbjct: 172 KDKRGESPFS-TDANLLHTSSEG 193


>gi|52425117|ref|YP_088254.1| thiamine biosynthesis protein ThiI [Mannheimia succiniciproducens
           MBEL55E]
 gi|81825551|sp|Q65TP1|THII_MANSM RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|52307169|gb|AAU37669.1| ThiI protein [Mannheimia succiniciproducens MBEL55E]
          Length = 486

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W   
Sbjct: 180 VLSLISGGFDSGVSSYMFIRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWNRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G   +  +AI  +     + + +        L    V   + +        A R GI  
Sbjct: 232 SGSHKVRFVAINFENVVGEILEKIDNGQMGVVLKRMMVRAASKV--------AERFGIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I    +A+         V  PL+   K     +A+ IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDEAASAL---------VLRPLITHDKEAIIAMAKQIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|187730842|ref|YP_001879941.1| tRNA-specific 2-thiouridylase MnmA [Shigella boydii CDC 3083-94]
 gi|205816914|sp|B2TZ86|MNMA_SHIB3 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|187427834|gb|ACD07108.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shigella boydii CDC 3083-94]
          Length = 368

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 56/190 (29%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +  ++     +A            +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWNNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            R                 L  E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 177 QVRKIAEDLG 186


>gi|296102847|ref|YP_003612993.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295057306|gb|ADF62044.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 370

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 53/192 (27%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +VE L     + +  E  C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYKVEGLFMKNWEEDDGEEYC--TAAADL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +             +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G            +                 L  E       P+  L
Sbjct: 115 FAAEDLGADYIATGHYVRRADVNGKSQLLRGLDGNKDQSYFLYTLSHEQIAQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K E  K+A+++
Sbjct: 175 EKPEVRKIAEEL 186


>gi|242309155|ref|ZP_04808310.1| tRNA methyltransferase [Helicobacter pullorum MIT 98-5489]
 gi|239524196|gb|EEQ64062.1| tRNA methyltransferase [Helicobacter pullorum MIT 98-5489]
          Length = 349

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 47/177 (26%), Gaps = 10/177 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              LLL SGG DSS C      +   V  +      +++        + +K  E +    
Sbjct: 2   KKVLLLMSGGVDSSYCAYLLQKQGYSVYGIYLKLHNKDEKHQYYTQNI-QKCSEYLKIPY 60

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             + E  +   ++      S             N    F     +         A  L  
Sbjct: 61  QIVDERELFKKSVYDYFVESYKQGLTPNPCAMCNPNVKFHIAFKL---------AKELNC 111

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
             +  G      +G      DT +     +    +  +      +  KK E  K   
Sbjct: 112 DFVATGHYAQIQNGRIAQAVDTHKDQSYFLFGLKQEWIDRIIFPLGDKKKEEIKPIA 168


>gi|206889455|ref|YP_002249424.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206889622|ref|YP_002249374.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206741393|gb|ACI20450.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206741560|gb|ACI20617.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 342

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 58/192 (30%), Gaps = 19/192 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              LL  SGG DSS       ++   VE + F        +    + + K+    +    
Sbjct: 2   EKVLLAMSGGIDSSVAAYLLREKGMAVEGVFF-----ILFDEPANIELAKQTANFLNI-- 54

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L +  L +   + +        +    PN  V     I       LA ++  
Sbjct: 55  -------KLHIEDLREKFKADVITPFFEGYKKGITPNPCVICNKKIKFPLLKFLAEKVKA 107

Query: 129 TNIVIGVCETDYSGYPD---CRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYETWKL 183
             I  G               +    +  ++    G+E  +   +  PL    KY+  ++
Sbjct: 108 NYIATGHYARIVRINNIPLLMKGIDPKKDQSYFLYGIERTLLSHIIFPLGEYTKYKIREI 167

Query: 184 AQDIGGQDLVNL 195
           A+ +G    V  
Sbjct: 168 AEKVGIPSKVAE 179


>gi|160892535|ref|ZP_02073325.1| hypothetical protein CLOL250_00064 [Clostridium sp. L2-50]
 gi|156865576|gb|EDO59007.1| hypothetical protein CLOL250_00064 [Clostridium sp. L2-50]
          Length = 362

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/241 (12%), Positives = 59/241 (24%), Gaps = 20/241 (8%)

Query: 7   KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL---CVRKKIVE 62
                + +  SGG DSS       ++   V  ++    Q    +        C    + +
Sbjct: 1   MDKKTVCVGMSGGVDSSVAAYLLKEQGYNVIGVTMQIWQDEDADQISEHGGCCGLSAVDD 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                       +++               +     +  N             L+  +  
Sbjct: 61  ARRVAAQLEIPYYVMNFKEDFRKYVIDYFVDEYRNGRTPNPCIACNRYVKWESLLRRSLS 120

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW---LKKYE 179
                I        E   SG    R       +    L   +   +   LM      K +
Sbjct: 121 IGGDYIATGHYARVEQLSSGRYTLRVAKGIEKDQTYALYNLTQDQLSKTLMPVGEYNKTQ 180

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
             ++A DIG Q       ++   C++   D                 R++G       + 
Sbjct: 181 IRQIAADIGIQVANKPDSQDI--CFVPDGDYAGY-----------LEREEGLKAVPGNFV 227

Query: 240 D 240
           D
Sbjct: 228 D 228


>gi|313848263|emb|CBY17264.1| conserved hypothetical protein [Chlamydophila psittaci RD1]
 gi|328914942|gb|AEB55775.1| MesJ/Ycf62 family protein, putative [Chlamydophila psittaci 6BC]
          Length = 297

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 22/65 (33%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             S LL  SGG DS   L     R      +  DYG R     E      +   E +P 
Sbjct: 1  MKKSYLLALSGGSDSLFLLYLLKSRGVSFTAVHVDYGWRESSYREAEELKLRCQEEGVPL 60

Query: 67 WKDSL 71
            + +
Sbjct: 61 IVNHV 65


>gi|224582263|ref|YP_002636061.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|254784229|sp|C0Q7V0|THII_SALPC RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|224466790|gb|ACN44620.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
          Length = 482

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 58/183 (31%), Gaps = 27/183 (14%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKWKD 69
            L L SGG DS       + R  RV    F+ G   +++           + ++     +
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAVHEIG----------VRQVAHYLWN 229

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G  H +    +         + V  +I +             + +  A+ +A R G+ 
Sbjct: 230 RFGSSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQ 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      S         I  +   +         +  PL+   K     LA+ IG 
Sbjct: 283 ALVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLARQIGT 333

Query: 190 QDL 192
           +D 
Sbjct: 334 EDF 336


>gi|323141806|ref|ZP_08076673.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Phascolarctobacterium sp. YIT 12067]
 gi|322413729|gb|EFY04581.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Phascolarctobacterium sp. YIT 12067]
          Length = 357

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 49/191 (25%), Gaps = 12/191 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR--KKIVELM 64
               AL+  SGG DSS      L++      ++        + +           + +  
Sbjct: 1   MNKKALIAMSGGVDSSVSALMMLEQDYECTGVTMKLFANEDIGVSKANSCCSIDDVADAR 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     ++   A   +        +  +  +  N             L      A 
Sbjct: 61  SVATSLGMLYYVFNFADRFERDVIDRFVDAYVNGRTPNPCIDCNRYLKFDQLF---VRAQ 117

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRA-------IETAINLGMESHVTVHTPLMWLKK 177
            LG   +V G            R+   +A             L  E       PL  L K
Sbjct: 118 ELGCDYVVTGHYAQISYDEAKGRYLLRKAVDPLKDQSYVLYALTQEQLAHAMFPLGGLYK 177

Query: 178 YETWKLAQDIG 188
            +  ++A+  G
Sbjct: 178 TQVREIAEKHG 188


>gi|319791106|ref|YP_004152746.1| tRNA (5-methylaminomethyL-2-thiouridylate)-methyltransferase
           [Variovorax paradoxus EPS]
 gi|315593569|gb|ADU34635.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Variovorax paradoxus EPS]
          Length = 366

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 49/191 (25%), Gaps = 12/191 (6%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DS+        +   V  +     + +     C   +    ++     
Sbjct: 3   KQRIVVGLSGGVDSAVTAHLLKQQGHEVVGIFMKNWEDDDDSEYCSSNI--DFIDAASVA 60

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                E   +            +      + +    PN  V     I        A RLG
Sbjct: 61  DVLGIEIEHVN---FAADYKDRVFAEFLREYKAGRTPNPDVLCNAEIKFKAFLDHAMRLG 117

Query: 128 ITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
              I  G            RH        +         L          P+  L K E 
Sbjct: 118 AEKIATGHYARVRHNEVTGRHELLKGLDPSKDQSYFLHRLNQAQLSKTLFPVGELHKTEV 177

Query: 181 WKLAQDIGGQD 191
            ++A++IG  +
Sbjct: 178 RRIAEEIGLPN 188


>gi|262402757|ref|ZP_06079318.1| thiamine biosynthesis protein ThiI [Vibrio sp. RC586]
 gi|262351539|gb|EEZ00672.1| thiamine biosynthesis protein ThiI [Vibrio sp. RC586]
          Length = 483

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 56/184 (30%), Gaps = 29/184 (15%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWK 68
            L L SGG DS       + R  +V    F+ G         +    + +K         
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQTAYYLWQKYGSSAKVRF 239

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            ++  + ++   +                  +             +F+  A  +A + GI
Sbjct: 240 IAIDFEPVVAEIL------------------EKIDDGQMGVVLKRMFMRAAGMVAEKFGI 281

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G      S         I  +   +         +  PL+   K +  +LA++IG
Sbjct: 282 QALVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKDDIIRLAREIG 332

Query: 189 GQDL 192
            +D 
Sbjct: 333 TEDF 336


>gi|226951365|ref|ZP_03821829.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acinetobacter sp. ATCC 27244]
 gi|226837887|gb|EEH70270.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acinetobacter sp. ATCC 27244]
          Length = 377

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 48/166 (28%), Gaps = 5/166 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS   +  L +  +VE L     + +     C     + + +    
Sbjct: 1   MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGLFMKNWEEDDGTEYC--TALEDLADAQAV 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H    A         + ++   +      PN  +     I        A  L
Sbjct: 59  ADKIGIKLHT---ANFAMEYWDRVFEHFLAEYAAGRTPNPDILCNKEIKFRAFLDHAMTL 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
           G   I  G      +   + R +T   +   ++   +    +H   
Sbjct: 116 GADFIATGHYARRGASMQNSRGETYAPLLRGVDNNKDQTYFLHAVH 161


>gi|126726432|ref|ZP_01742273.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhodobacterales bacterium HTCC2150]
 gi|126704295|gb|EBA03387.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhodobacterales bacterium HTCC2150]
          Length = 377

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 49/188 (26%), Gaps = 10/188 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +   ++   V  ++   Y     +  +   C  + I +     +
Sbjct: 19  RVVVAMSGGVDSSVVAAVLAEQGYDVVGVTLQLYDHGAALAKKGACCAGRDIHDARRVAE 78

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++    A        P   +     +        A  L  
Sbjct: 79  TMGFPHYVLDYEN---KFKEAVIDEFADSYLAGATPVPCIRCNERVKFKDLLETAKDLDA 135

Query: 129 TNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK-KYETWK 182
             +     +  +     +                 +   +    +  PL  L  K ET  
Sbjct: 136 DCMATGHYIQRMMGDTKAELHQAADGNRDQSYFLFSTKQDQLDYLRFPLGHLTSKAETRA 195

Query: 183 LAQDIGGQ 190
           LA   G  
Sbjct: 196 LAAKYGLP 203


>gi|120613352|ref|YP_973030.1| tRNA-specific 2-thiouridylase MnmA [Acidovorax citrulli AAC00-1]
 gi|166991120|sp|A1TWB8|MNMA_ACIAC RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|120591816|gb|ABM35256.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acidovorax citrulli AAC00-1]
          Length = 378

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 48/193 (24%), Gaps = 12/193 (6%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DS+        +   V  +     + +     C   V     + + 
Sbjct: 4   SPKQRIVVGLSGGVDSAVTAHLLKQQGHEVVGIFMKNWEDDDDSEYCSSNV-----DFVD 58

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
               +      +            +      + +    PN  V     I        A R
Sbjct: 59  AAAVADVIGIEIEHVNFAAEYKDRVFAEFLREYEAGRTPNPDVLCNAEIKFKAFLDHAMR 118

Query: 126 LGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWLKKY 178
           +G   I  G             H                  L          P+  L+K 
Sbjct: 119 VGAEKIATGHYARVRHNPATGLHELLKGLDPAKDQSYFLHRLNQSQLSRTLFPVGELRKT 178

Query: 179 ETWKLAQDIGGQD 191
           E  ++A++IG  +
Sbjct: 179 EVRRIAEEIGLPN 191


>gi|95930240|ref|ZP_01312978.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Desulfuromonas acetoxidans DSM 684]
 gi|95133703|gb|EAT15364.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Desulfuromonas acetoxidans DSM 684]
          Length = 346

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 53/190 (27%), Gaps = 21/190 (11%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY--GQRNKVELECRLCVRKKIVE 62
           +KK  + L+  SGG DSS   +  +D+   V         G ++         + +++  
Sbjct: 1   MKKN-TVLVAMSGGVDSSVTAALLIDQGYEVIGAHMRLLPGDQSIQGEADARRIAEELEI 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                                D  ++++  +   + +    PN  V             L
Sbjct: 60  PFHSL-------------DCRDTFNAAIIGDFCREYRAGRTPNPCVRCNQQFKFGALFAL 106

Query: 123 AYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKK 177
           A  LG   +  G            R     +           L       V  PL  L K
Sbjct: 107 ADELGADYLATGHYARIDRQKDHVRLCRGLYKQKDQSYFLFVLSAAQLKRVLFPLGGLTK 166

Query: 178 YETWKLAQDI 187
            E   LA+  
Sbjct: 167 PEVRNLAEKY 176


>gi|315185969|gb|EFU19733.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Spirochaeta thermophila DSM 6578]
          Length = 376

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 50/192 (26%), Gaps = 12/192 (6%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           ++    ++  SGG DSS      L     V  L+F    R     E       +      
Sbjct: 18  RRPRRLVVAMSGGVDSSVTAHLLLSAGIEVVGLTF---IRVNTPAEVDHEGFSEEARAAR 74

Query: 66  KWKDSLG-EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
           +    LG E H+L L  L   +   L +               +  R + F         
Sbjct: 75  EVASHLGIEHHVLNLHDL--YTSRVLRRAWEEYRSGRTPNPCVLCNRTLKFGHLVRYARE 132

Query: 125 RLGITNIVIGVCETDYSGYPDCRH---DTIRAIETAINLGMESHVTVHTPLMWL---KKY 178
            L    I  G     Y     C H         E +  L       +      L    K 
Sbjct: 133 VLRADGIATGHYARIYVDAEGCVHLLRGKAGTKEQSYFLAQTRPEDLRHAYFPLGDQTKN 192

Query: 179 ETWKLAQDIGGQ 190
           E    A+  G  
Sbjct: 193 EIRTYARHHGIP 204


>gi|110679829|ref|YP_682836.1| tRNA-specific 2-thiouridylase MnmA [Roseobacter denitrificans OCh
           114]
 gi|123065538|sp|Q166E3|MNMA_ROSDO RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|109455945|gb|ABG32150.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Roseobacter denitrificans OCh 114]
          Length = 380

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/136 (13%), Positives = 36/136 (26%), Gaps = 4/136 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +   +    V  ++   Y     +  +   C    I +     +
Sbjct: 22  RVVVAMSGGVDSSVVAAMLAEEGYDVVGVTLQLYDHGAALAKKGACCAGLDIHDARRVSE 81

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L    +      ++    A        P   +     +        A  L  
Sbjct: 82  KMGFPHYVLDYENI---FKDAVIDEFAESYLGGATPVPCIRCNERVKFKDLLETAKDLDA 138

Query: 129 TNIVIGVCETDYSGYP 144
             +  G      SG  
Sbjct: 139 DCMATGHYIQRKSGPY 154


>gi|145224833|ref|YP_001135511.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycobacterium gilvum PYR-GCK]
 gi|315445164|ref|YP_004078043.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycobacterium sp. Spyr1]
 gi|189040505|sp|A4TDZ4|MNMA_MYCGI RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|145217319|gb|ABP46723.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycobacterium gilvum PYR-GCK]
 gi|315263467|gb|ADU00209.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycobacterium sp. Spyr1]
          Length = 357

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 43/181 (23%), Gaps = 4/181 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE-LMPKWK 68
             L+  SGG DSS   +  +     V  +                    K       +  
Sbjct: 2   RVLVAMSGGVDSSVAAARMVAAGHDVVGVHLALSSAPGTLRTGSRGCCSKEDAGDARRVA 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D LG    +      D     +  +          PN  V     I     A+ A  LG 
Sbjct: 62  DVLGIPFYVW--DFADRFKEDVIDDFVESYARGETPNPCVRCNERIKFSALASRALALGF 119

Query: 129 TNIVIGVCETDYSGY-PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +  G       G                  L  E       P+    K +  + A  +
Sbjct: 120 DALATGHYARLADGRLRRAVDHDKDQSYVLAVLTAEQLRHAVFPIGDTPKAQIREEAARL 179

Query: 188 G 188
           G
Sbjct: 180 G 180


>gi|237738505|ref|ZP_04568986.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium mortiferum ATCC 9817]
 gi|229420385|gb|EEO35432.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium mortiferum ATCC 9817]
          Length = 357

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 54/187 (28%), Gaps = 18/187 (9%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +  K    A+ + SGG DSST       +   +  ++         E E    V + +  
Sbjct: 14  EKNKNIKIAVAM-SGGVDSSTVAYILKKQGYDLIGITMR---TCNPEDEDAKKVCEDLG- 68

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                       ++L          + +      +      PN  +     I        
Sbjct: 69  ---------IPHYVLD---ATKEFKTKVMDYFIEEYLQGKTPNPCMVCNKHIKFGMLIDF 116

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM-WLKKYETW 181
           A   G   +  G       G      D  +     ++   + ++      +  L+K +  
Sbjct: 117 ARSKGADFMATGHYTQLKDGVLSMGDDPNKDQVYFLSQINKENLKYLMFPIGDLEKPKVR 176

Query: 182 KLAQDIG 188
           +LA+ +G
Sbjct: 177 ELAEQLG 183


>gi|156361200|ref|XP_001625407.1| predicted protein [Nematostella vectensis]
 gi|156212239|gb|EDO33307.1| predicted protein [Nematostella vectensis]
          Length = 401

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 37/121 (30%), Gaps = 6/121 (4%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             + +L +SGG D+S  L W  ++   V     D GQ    + E      KK+      +
Sbjct: 7   RKTCVLAYSGGLDTSCILVWLQEQGYDVIAYLADIGQ--TEDFEAAREKAKKLGA-KKVY 63

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            + L E+ +            +        +    +    +  R I   +         G
Sbjct: 64  IEDLKEEFVTDFIFPSLQ---ANAIYEDRYLLGTAIARPCIAKRQIEIALKEGAQFVTHG 120

Query: 128 I 128
            
Sbjct: 121 A 121


>gi|328715380|ref|XP_001943073.2| PREDICTED: GMP synthase [glutamine-hydrolyzing]-like isoform 1
           [Acyrthosiphon pisum]
          Length = 682

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 56/193 (29%), Gaps = 9/193 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIV-ELMPK 66
             L+L SGG DS+ C +      DR  V  +  D G     E E  +     +  ++   
Sbjct: 227 KVLVLLSGGVDSTVCAALLHRALDREQVIAVHIDNGFMRLGESEQVMKSLNALGLDVKAV 286

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP----NTFVPGRNIIFLVFAATL 122
                 +     L  L   + + ++  +              + FV   +        + 
Sbjct: 287 NATFDFKYGTTILPDLHVSNRTRISPPLCQTSNPEEKRKIIGDVFVKTADKFLKTLNLSS 346

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA--INLGMESHVTVHTPLMWLKKYET 180
                    +        S       DTI+       +   +     V  PL    K E 
Sbjct: 347 EDVFLAQGTLRPDLIESASRLASTNADTIKTHHNDSKLIRELRDKGRVIEPLQEFHKDEV 406

Query: 181 WKLAQDIGGQDLV 193
            +L  D+G  + +
Sbjct: 407 RRLGMDLGLSESI 419


>gi|328715378|ref|XP_003245614.1| PREDICTED: GMP synthase [glutamine-hydrolyzing]-like isoform 2
           [Acyrthosiphon pisum]
          Length = 713

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 56/193 (29%), Gaps = 9/193 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIV-ELMPK 66
             L+L SGG DS+ C +      DR  V  +  D G     E E  +     +  ++   
Sbjct: 258 KVLVLLSGGVDSTVCAALLHRALDREQVIAVHIDNGFMRLGESEQVMKSLNALGLDVKAV 317

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP----NTFVPGRNIIFLVFAATL 122
                 +     L  L   + + ++  +              + FV   +        + 
Sbjct: 318 NATFDFKYGTTILPDLHVSNRTRISPPLCQTSNPEEKRKIIGDVFVKTADKFLKTLNLSS 377

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA--INLGMESHVTVHTPLMWLKKYET 180
                    +        S       DTI+       +   +     V  PL    K E 
Sbjct: 378 EDVFLAQGTLRPDLIESASRLASTNADTIKTHHNDSKLIRELRDKGRVIEPLQEFHKDEV 437

Query: 181 WKLAQDIGGQDLV 193
            +L  D+G  + +
Sbjct: 438 RRLGMDLGLSESI 450


>gi|325263320|ref|ZP_08130055.1| GMP synthase, C- domain protein [Clostridium sp. D5]
 gi|324031713|gb|EGB92993.1| GMP synthase, C- domain protein [Clostridium sp. D5]
          Length = 430

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 49/183 (26%), Gaps = 20/183 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +  +     ++  +  ++G   K E E  + V +   +L    
Sbjct: 136 KKVLLALSGGVDSSVVAALLIKAIGGQLVCVHVNHGLMRKNESESVVEVFQ--NQLHANL 193

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                 D  L                     ++          R              LG
Sbjct: 194 IYVDATDRFLD------------KLAGVADPEEKRKIIGGEFIRVFEEEARKLDGIEFLG 241

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I   + E+            +++      L  +    +  PL  L K E      ++
Sbjct: 242 QGTIYPDIIESGT-----KTAKMVKSHHNVGGLPEDLQFALVEPLKQLFKDEVRACGIEL 296

Query: 188 GGQ 190
           G  
Sbjct: 297 GLP 299


>gi|294102163|ref|YP_003554021.1| argininosuccinate synthase [Aminobacterium colombiense DSM 12261]
 gi|293617143|gb|ADE57297.1| argininosuccinate synthase [Aminobacterium colombiense DSM 12261]
          Length = 406

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
          +      +L +SGG D+S    W  ++   V T++ D GQ  +V+LE       K
Sbjct: 1  MLDKKKVVLAYSGGLDTSVATMWLKEQGYEVITMTADVGQ--QVDLEAAKQKALK 53


>gi|291617068|ref|YP_003519810.1| TrmU [Pantoea ananatis LMG 20103]
 gi|291152098|gb|ADD76682.1| TrmU [Pantoea ananatis LMG 20103]
          Length = 376

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 54/200 (27%), Gaps = 27/200 (13%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC-------- 52
           M+D        ++  SGG DSS        +  +VE L     + +  E  C        
Sbjct: 7   MSD--NCQKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAADDLAD 64

Query: 53  RLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN 112
              V  K+   + K                 +   +     +             +  + 
Sbjct: 65  AQAVCDKLGIKLHKVN------------FAAEYWDNVFEHFLEEYKAGRTPNPDILCNKE 112

Query: 113 IIFLVFAATLAYRLGITNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
           I F  F    A  LG   I     V        S     R            L  E    
Sbjct: 113 IKFKAFLEFAAEDLGADFIATGHYVRRQDSDGRSHLLRGRDGNKDQSYFLYTLSHEQIAQ 172

Query: 168 VHTPLMWLKKYETWKLAQDI 187
              P+  L+K E  ++A+++
Sbjct: 173 SLFPVGELEKPEVRRIAEEL 192


>gi|319760374|ref|YP_004124312.1| tRNA sulfurtransferase [Candidatus Blochmannia vafer str. BVAF]
 gi|318039088|gb|ADV33638.1| tRNA sulfurtransferase [Candidatus Blochmannia vafer str. BVAF]
          Length = 499

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 60/204 (29%), Gaps = 26/204 (12%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           +L L SGG DS+      + R  +V    F+        +E           +   W   
Sbjct: 180 SLSLISGGFDSTVASYMLIRRGCKVHYCFFNLIGNITHTIEV-------YKIISYLWNKF 232

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G   +        IS         + ++  N     +  R +I         Y++    
Sbjct: 233 SGSHKV------KLISVDFSIVVKELFMKIKNNYIGIILKRMMIRAASTLASHYKIK--- 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
                              T+  +    N+   S   V  PL+   K    KLA+ IG +
Sbjct: 284 -----SLVTGESLGQVSSQTLDNLILINNVVSSSDCIVFRPLIVHDKESIIKLARQIGTE 338

Query: 191 DLVNLILEE-----SHTCYLGKRD 209
           +L   I E        +C   K+ 
Sbjct: 339 ELSRTIPEYCGLISKRSCAKAKKK 362


>gi|298490690|ref|YP_003720867.1| GMP synthase large subunit ['Nostoc azollae' 0708]
 gi|298232608|gb|ADI63744.1| GMP synthase, large subunit ['Nostoc azollae' 0708]
          Length = 540

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 56/187 (29%), Gaps = 11/187 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSST          +++  +  D G   K+E E    + K   E    
Sbjct: 236 EKRVLLALSGGVDSSTLAFLLYKAIGEQLTCVFIDQGFMRKLEPE---RLLKLFQEQFHI 292

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             + +        AI       +   +   K +        V       L     LA   
Sbjct: 293 PVEYVNARDRFIKAI-------ADIIDPEEKRRRIGHEFIRVFEETSKKLGHFDYLAQGT 345

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
              +++            +     I++      L  +    +  PL  L K E  K+ + 
Sbjct: 346 LYPDVIESADTNVDPKTGERVAVKIKSHHNVGGLPKDLRFKLVEPLRKLFKDEVRKVGRS 405

Query: 187 IGGQDLV 193
           IG  + +
Sbjct: 406 IGLPEEI 412


>gi|239813406|ref|YP_002942316.1| tRNA-specific 2-thiouridylase MnmA [Variovorax paradoxus S110]
 gi|239799983|gb|ACS17050.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Variovorax paradoxus S110]
          Length = 369

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 49/191 (25%), Gaps = 12/191 (6%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DS+        +   V  +     + +     C   +     + +   
Sbjct: 3   KQRIVVGLSGGVDSAVTAHLLKQQGHEVVGIFMKNWEDDDDSEYCSSNI-----DFVDAA 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +      +            +      + +    PN  V     I        A RLG
Sbjct: 58  SVADVLGIEIEHVNFAADYKDRVFAEFLREYKAGRTPNPDVLCNAEIKFKAFLDHAMRLG 117

Query: 128 ITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
              I  G            RH        +         L          P+  L K E 
Sbjct: 118 AEKIATGHYARVRLNETTGRHELLKGLDPSKDQSYFLHRLNQAQLSKTLFPVGELHKTEV 177

Query: 181 WKLAQDIGGQD 191
            ++A++IG  +
Sbjct: 178 RRIAEEIGLPN 188


>gi|11499151|ref|NP_070385.1| hypothetical protein AF1556 [Archaeoglobus fulgidus DSM 4304]
 gi|2649005|gb|AAB89691.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 274

 Score = 54.9 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 32/74 (43%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
          +N  I++    L+ FSGG DSST  +   +    V  ++       + E+E    + +++
Sbjct: 19 LNHFIQQFEKVLIAFSGGVDSSTLAAVCSNAGVEVLAVTVLSSVSPRREMEEAKRIAEEL 78

Query: 61 VELMPKWKDSLGED 74
                 K  L ++
Sbjct: 79 GVRHEFLKIDLMDE 92


>gi|284007318|emb|CBA72670.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Arsenophonus nasoniae]
          Length = 364

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 50/185 (27%), Gaps = 9/185 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS        +  +V  L     + +  E  C       + +      
Sbjct: 2   KKVIVGMSGGVDSSVSAYLLKQQGYQVAGLFMKNWEEDDNEEYCA--AATDLADAQSVCD 59

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E H +      +   +     +A            +  + I F  F    A  L  
Sbjct: 60  KLDIELHTVN--FAAEYWDNVFAHFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLAA 117

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             I  G      +     +      +          L          P+  L+K    ++
Sbjct: 118 DYIATGHYARCKTVNGRHQLLRGLDNNKDQSYFLYTLDQAQLAQSLFPIGELEKSTVRRI 177

Query: 184 AQDIG 188
           A++IG
Sbjct: 178 AEEIG 182


>gi|255348647|ref|ZP_05380654.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia trachomatis 70]
 gi|255503187|ref|ZP_05381577.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia trachomatis 70s]
          Length = 358

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 54/186 (29%), Gaps = 9/186 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSF-DYGQRNKVELECRLCVRKKIVELM 64
              + ++  SGG DSS        +    V  L   ++G++++          + +  + 
Sbjct: 1   MRKTIIVAMSGGVDSSVVAYLLKKQGEYNVVGLFMKNWGEQDENGECTATKDFRDVERIA 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            +            ++   +      ++ +             +  R I F +    +  
Sbjct: 61  EQLSIPYYT-----VSFSKEYKERVFSRFLREYANGYTPNPDVLCNREIKFDLLQKKVRE 115

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYETWK 182
             G        C     G    R       ++    G        V  PL  + K E  +
Sbjct: 116 LKGDFLATGHYCRGGADGTGLSRGIDPNKDQSYFLCGTPKDALSNVLFPLGGMYKTEVRR 175

Query: 183 LAQDIG 188
           +AQ+ G
Sbjct: 176 IAQEAG 181


>gi|229846706|ref|ZP_04466813.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae 7P49H1]
 gi|229810195|gb|EEP45914.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae 7P49H1]
          Length = 485

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 54/182 (29%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W+  
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWQRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  + I  +     + + V        L    V   + +        A R  I  
Sbjct: 232 SASHKVRFITINFEGVVGEILEKVDNGQMGVVLKRMMVRAASKV--------AQRFNIEA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I     A+         V  PL+   K +   +A++IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDEAADAL---------VLRPLITHDKEQIIAMAKEIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|68250032|ref|YP_249144.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae
           86-028NP]
 gi|145632794|ref|ZP_01788527.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae 3655]
 gi|145634986|ref|ZP_01790693.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae PittAA]
 gi|81335544|sp|Q4QKG3|THII_HAEI8 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|68058231|gb|AAX88484.1| predicted thiamine biosynthesis ATP pyrophosphatase [Haemophilus
           influenzae 86-028NP]
 gi|144986450|gb|EDJ93016.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae 3655]
 gi|145267852|gb|EDK07849.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae PittAA]
          Length = 485

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 54/182 (29%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W+  
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWQRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  + I  +     + + V        L    V   + +        A R  I  
Sbjct: 232 SASHKVRFITINFEGVVGEILEKVDNGQMGVVLKRMMVRAASKV--------AQRFNIEA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I     A+         V  PL+   K +   +A++IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDEAADAL---------VLRPLITHDKEQIIAMAKEIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|268680794|ref|YP_003305225.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Sulfurospirillum deleyianum DSM 6946]
 gi|268618825|gb|ACZ13190.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Sulfurospirillum deleyianum DSM 6946]
          Length = 339

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 46/179 (25%), Gaps = 16/179 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIVELMPK 66
              LL SGG DSS C     +    V  +     D  +++ V +     V + +      
Sbjct: 2   KIALLMSGGIDSSYCAYLLKEEGHEVVGIYLKLHDDDKKHGVNIANIEKVSQHLG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + HI+    L                +    PN        +   FA   A   
Sbjct: 57  -----IKTHIIDAKALFKEQIYDYFV---RSYEQGLTPNPCAFCNPKMKFGFAFEKALEF 108

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           G   I  G       G+     D  +     +       +      +   K E  K   
Sbjct: 109 GCEKIATGHYARVKEGHIQEAKDKSKDQSYFLFGLKREVIEKIIFPLGEMKKEEIKPIA 167


>gi|37679057|ref|NP_933666.1| thiamine biosynthesis protein ThiI [Vibrio vulnificus YJ016]
 gi|44888371|sp|Q7MN44|THII_VIBVY RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|37197799|dbj|BAC93637.1| thiamine biosynthesis ATP pyrophosphatase [Vibrio vulnificus YJ016]
          Length = 482

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 57/181 (31%), Gaps = 25/181 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           L L SGG DS       + R  +V    F+ G            +   + ++     +  
Sbjct: 181 LSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGP-------AHEI--GVKQVAHFLWNKY 231

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G       +       S   + V  +I +             +F+  A  +A +  I  +
Sbjct: 232 G-------SSAKVRFISVDFEPVVAEILEKVEDGQMGVVLKRMFMRAAGMVAEKFDIQAL 284

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V G      S         I  +   +         +  PL+   K E  K+A+DIG +D
Sbjct: 285 VTGEALGQVSSQTLTNLRHIDVVTDRL---------ILRPLINWDKDEIIKVARDIGTED 335

Query: 192 L 192
            
Sbjct: 336 F 336


>gi|27363785|ref|NP_759313.1| tRNA s(4)U8 sulfurtransferase [Vibrio vulnificus CMCP6]
 gi|320157194|ref|YP_004189573.1| thiamine biosynthesis protein thiI [Vibrio vulnificus MO6-24/O]
 gi|29611890|sp|Q8DFA8|THII_VIBVU RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|27359901|gb|AAO08840.1| thiamine biosynthesis/tRNA modification protein ThiI [Vibrio
           vulnificus CMCP6]
 gi|319932506|gb|ADV87370.1| thiamine biosynthesis protein thiI [Vibrio vulnificus MO6-24/O]
          Length = 482

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 57/181 (31%), Gaps = 25/181 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           L L SGG DS       + R  +V    F+ G            +   + ++     +  
Sbjct: 181 LSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGP-------AHEI--GVKQVAHFLWNKY 231

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G       +       S   + V  +I +             +F+  A  +A +  I  +
Sbjct: 232 G-------SSAKVRFISVDFEPVVAEILEKVEDGQMGVVLKRMFMRAAGMVAEKFDIQAL 284

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V G      S         I  +   +         +  PL+   K E  K+A+DIG +D
Sbjct: 285 VTGEALGQVSSQTLTNLRHIDVVTDRL---------ILRPLINWDKDEIIKVARDIGTED 335

Query: 192 L 192
            
Sbjct: 336 F 336


>gi|319789152|ref|YP_004150785.1| GMP synthase, large subunit [Thermovibrio ammonificans HB-1]
 gi|317113654|gb|ADU96144.1| GMP synthase, large subunit [Thermovibrio ammonificans HB-1]
          Length = 518

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 55/187 (29%), Gaps = 17/187 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            + +   SGG DSS   +       D++  +  D G   K E E      K+        
Sbjct: 221 KNVICALSGGVDSSVVAALLHRAIGDQLYPIFVDTGLLRKGERESVERTFKE-------- 272

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           K  +    ++  + L       +T       +                       A  L 
Sbjct: 273 KFHMKNFKVIDASDLFLERLKGVTDP-----EQKRKIIGHTFIEVFEKAAKEIPNAEFLA 327

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   V E+     P      I++      L    +  +  PL  L K E  +L +++
Sbjct: 328 QGTLYPDVIESVSVKGPSAT---IKSHHNVGGLPERLNFKLIEPLRELFKDEVRELGKEL 384

Query: 188 GGQDLVN 194
           G  + + 
Sbjct: 385 GLPEEII 391


>gi|302879202|ref|YP_003847766.1| argininosuccinate synthase [Gallionella capsiferriformans ES-2]
 gi|302581991|gb|ADL56002.1| argininosuccinate synthase [Gallionella capsiferriformans ES-2]
          Length = 407

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 50/157 (31%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +     A+L +SGG D+S  L W  D +   V T + D GQ  ++E        K  +  
Sbjct: 1   MSDIKKAVLAYSGGLDTSVILKWLQDTYQCEVVTFTADVGQGEELEPARA-KALKMGITP 59

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + D L E+ +            + T      +   ++    +  R I         A
Sbjct: 60  ENIYIDDLREEFVRDFVF---PMFRANTVYEGEYLLGTSIARPLIAKRLIEIASMTGAQA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         +   Y    +  + A     +L
Sbjct: 117 ISHGATGKGNDQVRFELGAYALNPNIKVIAPWREWDL 153


>gi|240047229|ref|YP_002960617.1| tRNA-specific 2-thiouridylase MnmA [Mycoplasma conjunctivae
           HRC/581]
 gi|239984801|emb|CAT04780.1| tRNA-specific 2-thiouridylase mnmA [Mycoplasma conjunctivae]
          Length = 370

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 51/192 (26%), Gaps = 23/192 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF--------------DYGQRNKVELECRLC 55
             ++  SGG DSS        +   V  +                D  Q +    E    
Sbjct: 3   RIVVGLSGGVDSSVTAYLLKQQGHEVIAVFMRNWDSTINNDIKGNDSYQDHICPQEKDWL 62

Query: 56  VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
             +KI + +          H +    + +  +      +             +  +NI F
Sbjct: 63  DAQKIAKQLD------IPIHRVD--FIDEYWNEVFEDLIEKYKNGKTPNPDILCNKNIKF 114

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDC-RHDTIRAIETAINLGMESHVTVHTPLMW 174
             F      +     I +G      + +    + +          L  E    V  PL  
Sbjct: 115 KHFLNYSIEKFKADFIAMGHYAKTENSFLFEAKDENKDQSYFLSQLSNEQLKKVLFPLGD 174

Query: 175 LKKYETWKLAQD 186
             K +  K+A +
Sbjct: 175 YTKDQVRKIAFE 186


>gi|289706606|ref|ZP_06502956.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Micrococcus luteus SK58]
 gi|289556741|gb|EFD50082.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Micrococcus luteus SK58]
          Length = 539

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 57/186 (30%), Gaps = 8/186 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             A+   SGG DS+   +       DR+  +  D+G   + E      + +   E     
Sbjct: 232 KRAICGLSGGVDSAVAAALVQRAIGDRLTCVYVDHGLMREGE---SAEIEQAFGEAHGGA 288

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +  + +     L+ L  ++     + +     +  +        +I+        A  + 
Sbjct: 289 RLVMVDAREDFLSALAGVTDPEAKRKIIG---ERFIRTFEKAQADIVLESEHDPDATEVR 345

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   +               I++      L  +    +  PL  L K E   +  ++
Sbjct: 346 -FLVQGTLYPDVVESGGGDGAANIKSHHNVGGLPDDIEFELCEPLRELFKDEVRAVGAEL 404

Query: 188 GGQDLV 193
           G  + +
Sbjct: 405 GLPEGI 410


>gi|239918131|ref|YP_002957689.1| GMP synthase (glutamine-hydrolyzing) [Micrococcus luteus NCTC 2665]
 gi|259647685|sp|C5CBZ4|GUAA_MICLC RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|239839338|gb|ACS31135.1| GMP synthase (glutamine-hydrolyzing) [Micrococcus luteus NCTC 2665]
          Length = 539

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 57/186 (30%), Gaps = 8/186 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             A+   SGG DS+   +       DR+  +  D+G   + E      + +   E     
Sbjct: 232 KRAICGLSGGVDSAVAAALVQRAIGDRLTCVYVDHGLMREGE---SAEIEQAFGEAHGGA 288

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +  + +     L+ L  ++     + +     +  +        +I+        A  + 
Sbjct: 289 RLVMVDAREDFLSALAGVTDPEAKRKIIG---ERFIRTFEKAQADIVLESEHDPDATEVR 345

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   +               I++      L  +    +  PL  L K E   +  ++
Sbjct: 346 -FLVQGTLYPDVVESGGGDGAANIKSHHNVGGLPDDIEFELCEPLRELFKDEVRAVGAEL 404

Query: 188 GGQDLV 193
           G  + +
Sbjct: 405 GLPEGI 410


>gi|116071765|ref|ZP_01469033.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Synechococcus sp. BL107]
 gi|116065388|gb|EAU71146.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Synechococcus sp. BL107]
          Length = 528

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 52/191 (27%), Gaps = 19/191 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSST          D++  +  D G   K E E               
Sbjct: 224 QKRVLLALSGGVDSSTLAFLLKKAIGDQLTCMFIDQGFMRKGEPEF-------------- 269

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +   +   + +  +                +D          R              L
Sbjct: 270 LMEFFDQKFNINVEYINARKRFIDKLKGITDPEDKRKIIGTEFIRVFEEESKRLGPFDYL 329

Query: 127 GITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
               +   V E+  +       +     I++      L  +    +  PL  L K E  K
Sbjct: 330 AQGTLYPDVIESAGTNVDPKTGERVAVKIKSHHNVGGLPKDLRFKLVEPLRKLFKDEVRK 389

Query: 183 LAQDIGGQDLV 193
           + +++G  + +
Sbjct: 390 VGRNLGLPEEI 400


>gi|78183626|ref|YP_376060.1| GMP synthase [Synechococcus sp. CC9902]
 gi|123582368|sp|Q3B0W1|GUAA_SYNS9 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|78167920|gb|ABB25017.1| GMP synthase (glutamine-hydrolyzing) [Synechococcus sp. CC9902]
          Length = 528

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 52/191 (27%), Gaps = 19/191 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSST          D++  +  D G   K E E               
Sbjct: 224 QKRVLLALSGGVDSSTLAFLLKKAIGDQLTCMFIDQGFMRKGEPEF-------------- 269

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +   +   + +  +                +D          R              L
Sbjct: 270 LMEFFDQKFNINVEYINARKRFIDKLKGITDPEDKRKIIGTEFIRVFEEESKRLGPFDYL 329

Query: 127 GITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
               +   V E+  +       +     I++      L  +    +  PL  L K E  K
Sbjct: 330 AQGTLYPDVIESAGTNVDPKTGERVAVKIKSHHNVGGLPKDLRFKLVEPLRKLFKDEVRK 389

Query: 183 LAQDIGGQDLV 193
           + +++G  + +
Sbjct: 390 VGRNLGLPEEI 400


>gi|153813145|ref|ZP_01965813.1| hypothetical protein RUMOBE_03554 [Ruminococcus obeum ATCC 29174]
 gi|149830800|gb|EDM85890.1| hypothetical protein RUMOBE_03554 [Ruminococcus obeum ATCC 29174]
          Length = 375

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 45/190 (23%), Gaps = 10/190 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
               A++  SGG DSS      +         +   Y          R C      E   
Sbjct: 11  MQKKAIIAMSGGVDSSVAAYLMVKEGYDCAGATLKLYDNPQCSFPGHRACCTPSDTEDAR 70

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                LG  + +    + D    S+    A        PN  +     +        A  
Sbjct: 71  SVAARLGMLYYVF--PMHDEFRHSVIDKFADTYLHGGTPNPCIDCNRFLKFSALLDKARE 128

Query: 126 LGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWLKKY 178
           LG   I  G            R         T         +  +       PL    K 
Sbjct: 129 LGCEYIASGHYARREQDPETGRFILKKGLDPTKDQSYVLYAMTQDQLAHTLFPLGSYTKK 188

Query: 179 ETWKLAQDIG 188
           E   +AQ  G
Sbjct: 189 EIRHIAQKQG 198


>gi|126179559|ref|YP_001047524.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Methanoculleus marisnigri JR1]
 gi|125862353|gb|ABN57542.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Methanoculleus marisnigri JR1]
          Length = 392

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 51/180 (28%), Gaps = 23/180 (12%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            + L S G DS       + R   V  +  +    +           K ++    +    
Sbjct: 177 VMALLSEGIDSPVASWLMMRRGCLV--VHVNM---HGGRFGGAD-AEKNVLANHARLSLW 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           +    +  L +  +   +++T            P           L  A+ LA   G   
Sbjct: 231 VPGHALDLLVVEMEPFFTAITGLKE--------PRYRCVLCKRFMLRVASLLATERGAAA 282

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      +          + +     +   + V V  PL+   K E    A+ IG  
Sbjct: 283 LVSGDNLGQVAS---------QTLANMAVIAPAATVPVLRPLIGFDKEEVVDRARAIGTF 333


>gi|212225045|ref|YP_002308281.1| GMP synthase subunit B [Thermococcus onnurineus NA1]
 gi|212010002|gb|ACJ17384.1| GMP synthase [Thermococcus onnurineus NA1]
          Length = 307

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 58/185 (31%), Gaps = 25/185 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A++  SGG DSST    A     D++  +  + G   K E E    V K   + +    
Sbjct: 21  KAIIALSGGVDSSTAAVLAHRAIGDKLHAVFVNTGFLRKGEPEF---VLKTFRDELGMNL 77

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             +        A+ G        K +     +                     +A  +  
Sbjct: 78  HYVDAQGRFFEALKGVTDPEEKRKVIGRVFIE-----------------VFEEVAREIDA 120

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++        +         I++      L    ++ +  PL  L K E  +LA+++G
Sbjct: 121 EFLIQ----GTIAPDWIESKGKIKSHHNVGGLPERLNLKLIEPLRDLYKDEVRELAKELG 176

Query: 189 GQDLV 193
             + +
Sbjct: 177 LPEKI 181


>gi|197119999|ref|YP_002140426.1| argininosuccinate synthase [Geobacter bemidjiensis Bem]
 gi|226697532|sp|B5ED13|ASSY_GEOBB RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|197089359|gb|ACH40630.1| argininosuccinate synthase [Geobacter bemidjiensis Bem]
          Length = 406

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 64/204 (31%), Gaps = 17/204 (8%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCV---RKKIV 61
           K+    +L +SGG D+S  L W  +     V T S D GQ +++E            K+ 
Sbjct: 4   KEVKKIVLAYSGGLDTSIILKWLKNEYGCEVVTFSADLGQGDELEPVREKAFKTGADKV- 62

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
             +   ++    D + P+     I   S     ++           +  R +        
Sbjct: 63  -YIDDLREEFVRDFVYPMFRANAIYEGSYLLGTSIARP-------LIAKRQMEIAKIEGC 114

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP----LMWLKK 177
            A   G T         + + Y      T+ A      L     +  +       + + K
Sbjct: 115 DAVSHGATGKGNDQVRFELAYYHFNPGITVVAPWREWKLNSRQALINYAKRNDIPIPITK 174

Query: 178 YETWKLAQDIGGQDLVNLILEESH 201
              W   +++        ILE++ 
Sbjct: 175 KRPWSSDRNLLHISFEGGILEDTW 198


>gi|56696559|ref|YP_166916.1| tRNA-specific 2-thiouridylase MnmA [Ruegeria pomeroyi DSS-3]
 gi|81349989|sp|Q5LST9|MNMA_SILPO RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|56678296|gb|AAV94962.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ruegeria pomeroyi DSS-3]
          Length = 375

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/184 (11%), Positives = 48/184 (26%), Gaps = 6/184 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   ++  D+   V  ++   Y     +  +   C    I +     +
Sbjct: 16  RVVVAMSGGVDSSVVAAYLADQGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDARRVAE 75

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +     ++L    +   +      +  +                   L+  A        
Sbjct: 76  ERGFPHYVLDYENIFKDAVIDEFADSYLAGATPVPCIRCNERVKFKDLLETARDLEA-DC 134

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL----KKYETWKLA 184
                 +        P+         + +  L   +   +      L     K  T ++A
Sbjct: 135 MATGHYIQRKMGPNGPELHCAEDANRDQSYFLFSTTPEQLDYLRFPLGHLPSKDATREMA 194

Query: 185 QDIG 188
              G
Sbjct: 195 AQYG 198


>gi|91215966|ref|ZP_01252935.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Psychroflexus torquis ATCC 700755]
 gi|91185943|gb|EAS72317.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Psychroflexus torquis ATCC 700755]
          Length = 397

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 37/137 (27%), Gaps = 3/137 (2%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS       ++   V  L       + V +       +   + M   +
Sbjct: 2   KRVVVGLSGGVDSSVAAYLCKEKGYEVIGLFMKNWHDDSVTISDECPWLEDSNDAMLVAE 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   +    L       +   +  + +    PN  V     I       +A  LG 
Sbjct: 62  KLGIPFQTVD---LSKQYKERIVDYMFAEYEKGRTPNPDVLCNREIKFDVFMDIATSLGA 118

Query: 129 TNIVIGVCETDYSGYPD 145
             +  G      S   +
Sbjct: 119 DYVATGHYCRKDSIEKN 135


>gi|163731902|ref|ZP_02139349.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Roseobacter litoralis Och 149]
 gi|161395356|gb|EDQ19678.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Roseobacter litoralis Och 149]
          Length = 380

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 36/135 (26%), Gaps = 4/135 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +   +    V  ++   Y     +  +   C    I +     +
Sbjct: 22  RVVVAMSGGVDSSVVAAMLAEEGYDVVGVTLQLYDHGAALAKKGACCAGLDIHDARRVSE 81

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L    +      ++    A        P   +     +        A  L  
Sbjct: 82  KMGFPHYVLDYENI---FKDAVIDEFAESYLGGATPVPCIRCNERVKFKDLLETAKDLDA 138

Query: 129 TNIVIGVCETDYSGY 143
             +  G      SG 
Sbjct: 139 DCMATGHYIQRKSGP 153


>gi|152989960|ref|YP_001355682.1| hypothetical protein NIS_0211 [Nitratiruptor sp. SB155-2]
 gi|151421821|dbj|BAF69325.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
          Length = 329

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 8/73 (10%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ---RNKVELECRLCVR 57
          M+ I      AL LFSGG DS   +   +D+   V  L FD G      + + E    + 
Sbjct: 1  MSKI-----RALALFSGGLDSLLAMKLIIDQGVDVIGLHFDTGFGGRNAEQKKEYLEKIT 55

Query: 58 KKIVELMPKWKDS 70
          +KI   +      
Sbjct: 56 QKIGAKLEIVNIR 68


>gi|126179558|ref|YP_001047523.1| ExsB family protein [Methanoculleus marisnigri JR1]
 gi|125862352|gb|ABN57541.1| ExsB family protein [Methanoculleus marisnigri JR1]
          Length = 257

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 58/187 (31%), Gaps = 34/187 (18%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           ++K      +  SGG DSS  L+ A     +V  +S D G     EL     + +++   
Sbjct: 10  LLKSYEPVAVALSGGTDSSVLLALARHHGIQVIAISVDTGLTPPGELAAARKLSERLG-- 67

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                       ++PL +L               +++N     +V  R ++  +     A
Sbjct: 68  --------LPHVVIPLDML-----------DIPAVRENRPDRCYVCKRAMMEAIV--AEA 106

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            R G   +V G    D                          +        + K +   L
Sbjct: 107 RRQGCRTVVDGTHADDRPAARPGMRVLSE-----------LGIKSPFAECGMGKADVEAL 155

Query: 184 AQDIGGQ 190
           A+++G  
Sbjct: 156 ARELGVP 162


>gi|66522082|ref|XP_393336.2| PREDICTED: GMP synthase [glutamine-hydrolyzing] [Apis mellifera]
          Length = 718

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 2/63 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               LLL SGG DS+ C +        ++V  L  + G   K E +       ++   + 
Sbjct: 240 NKKVLLLVSGGVDSTVCAALLHKALNKEQVIALHINNGFMRKGETQFVEQSLAQLGIRLR 299

Query: 66  KWK 68
              
Sbjct: 300 VVN 302


>gi|87123303|ref|ZP_01079154.1| GMP synthase [Synechococcus sp. RS9917]
 gi|86169023|gb|EAQ70279.1| GMP synthase [Synechococcus sp. RS9917]
          Length = 528

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 50/191 (26%), Gaps = 19/191 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSST          D++  +  D G   K E E               
Sbjct: 224 EKRVLLALSGGVDSSTLAFLLKKAIGDQLTCMFIDQGFMRKGEPEF-------------- 269

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D       + +  +                ++          R              L
Sbjct: 270 LMDFFDRKFNIHVEYIHARKRFLDKLAGITDPEEKRKIIGTEFIRVFEEESKRLGPFDYL 329

Query: 127 GITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
               +   V E+  +       +     I++      L  +    +  PL  L K E  K
Sbjct: 330 AQGTLYPDVIESAGTNIDPKTGERVAVKIKSHHNVGGLPKDLQFKLVEPLRKLFKDEVRK 389

Query: 183 LAQDIGGQDLV 193
           + + +G  + +
Sbjct: 390 VGRSLGLPEEI 400


>gi|308510318|ref|XP_003117342.1| hypothetical protein CRE_01794 [Caenorhabditis remanei]
 gi|308242256|gb|EFO86208.1| hypothetical protein CRE_01794 [Caenorhabditis remanei]
          Length = 707

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 55/187 (29%), Gaps = 3/187 (1%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              L++ SGG DS+ C +        +RV  +  D G     E +        +   + +
Sbjct: 235 KKVLVMVSGGVDSAVCAALLSRALGPNRVTAIHIDNGFMRHEESDAVEKSLAALNLPVHR 294

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +            A  G++S          +    N              +         
Sbjct: 295 YNYGTTFRSSGEHAQEGEMSLDECDDPELKRRIIGNTFIRVKDLIMKDLNITHEEYFLAQ 354

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G     +    +  +        T    +TA+   + +   V  PL    K E  +L +D
Sbjct: 355 GTLRPDLIESASALASGHADTIKTHH-NDTALVRDLRNLGKVVEPLKDFHKDEVRELGKD 413

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 414 LGLPEQI 420


>gi|225405534|ref|ZP_03760723.1| hypothetical protein CLOSTASPAR_04754 [Clostridium asparagiforme
           DSM 15981]
 gi|225042946|gb|EEG53192.1| hypothetical protein CLOSTASPAR_04754 [Clostridium asparagiforme
           DSM 15981]
          Length = 437

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 58/185 (31%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +  L    +++  +  ++G   K E E  + V K  +     + 
Sbjct: 144 KVLLALSGGVDSSVVAALLLKAIGNQLVCVHVNHGLMRKNESESVVEVFKNQLHANLIYV 203

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D++          LG + + S  +     I    +       R +             GI
Sbjct: 204 DAV-------ERFLGKLENVSDPEQKRKIIGGEFIRVFEEEARKLD------------GI 244

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G    D           +++      L  +    +  PL  L K E      ++G
Sbjct: 245 DFLGQGTIYPDIIESGTKTAKMVKSHHNVGGLPEDLKFELVEPLKQLFKDEVRACGVELG 304

Query: 189 GQDLV 193
               +
Sbjct: 305 LPHSM 309


>gi|260433794|ref|ZP_05787765.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417622|gb|EEX10881.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Silicibacter lacuscaerulensis ITI-1157]
          Length = 381

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/184 (11%), Positives = 48/184 (26%), Gaps = 6/184 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   ++  D+   V  ++   Y     +  +   C    I +     +
Sbjct: 22  RVVVAMSGGVDSSVVAAYLADQGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDARRVAE 81

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +     ++L    +   +      +  +                   L+  A        
Sbjct: 82  ERGFPHYVLDYENIFKDAVIDEFADSYLAGATPVPCIRCKERVKFKDLLETAKDLEA-DC 140

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL----KKYETWKLA 184
                 +        P+         + +  L   +   +      L     K  T ++A
Sbjct: 141 MATGHYIQRKMGPNGPELHCAEDANRDQSYFLFSTTPEQLEFLRFPLGHLPSKDATREMA 200

Query: 185 QDIG 188
              G
Sbjct: 201 AQYG 204


>gi|262165144|ref|ZP_06032881.1| thiamine biosynthesis protein ThiI [Vibrio mimicus VM223]
 gi|262024860|gb|EEY43528.1| thiamine biosynthesis protein ThiI [Vibrio mimicus VM223]
          Length = 471

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 56/184 (30%), Gaps = 29/184 (15%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWK 68
            L L SGG DS       + R  +V    F+ G         +    + +K         
Sbjct: 168 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQTAYYLWQKYGSSAKVRF 227

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            ++  + ++   +                  +             +F+  A  +A + GI
Sbjct: 228 IAIDFEPVVAEIL------------------EKIDDGQMGVVLKRMFMRAAGMVAEKFGI 269

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G      S         I  +   +         +  PL+   K +  +LA++IG
Sbjct: 270 QALVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIIRLAREIG 320

Query: 189 GQDL 192
            +D 
Sbjct: 321 TEDF 324


>gi|262172093|ref|ZP_06039771.1| thiamine biosynthesis protein ThiI [Vibrio mimicus MB-451]
 gi|261893169|gb|EEY39155.1| thiamine biosynthesis protein ThiI [Vibrio mimicus MB-451]
          Length = 483

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 56/184 (30%), Gaps = 29/184 (15%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWK 68
            L L SGG DS       + R  +V    F+ G         +    + +K         
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQTAYYLWQKYGSSAKVRF 239

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            ++  + ++   +                  +             +F+  A  +A + GI
Sbjct: 240 IAIDFEPVVAEIL------------------EKIDDGQMGVVLKRMFMRAAGMVAEKFGI 281

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G      S         I  +   +         +  PL+   K +  +LA++IG
Sbjct: 282 QALVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIIRLAREIG 332

Query: 189 GQDL 192
            +D 
Sbjct: 333 TEDF 336


>gi|261212056|ref|ZP_05926342.1| thiamine biosynthesis protein ThiI [Vibrio sp. RC341]
 gi|260838664|gb|EEX65315.1| thiamine biosynthesis protein ThiI [Vibrio sp. RC341]
          Length = 483

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 56/184 (30%), Gaps = 29/184 (15%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWK 68
            L L SGG DS       + R  +V    F+ G         +    + +K         
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQTAYYLWQKYGSSAKVRF 239

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            ++  + ++   +                  +             +F+  A  +A + GI
Sbjct: 240 IAIDFEPVVAEIL------------------EKIDDGQMGVVLKRMFMRAAGMVAEKFGI 281

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G      S         I  +   +         +  PL+   K +  +LA++IG
Sbjct: 282 QALVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIIRLAREIG 332

Query: 189 GQDL 192
            +D 
Sbjct: 333 TEDF 336


>gi|258621629|ref|ZP_05716661.1| thiamin biosynthesis protein ThiI [Vibrio mimicus VM573]
 gi|258586101|gb|EEW10818.1| thiamin biosynthesis protein ThiI [Vibrio mimicus VM573]
          Length = 483

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 56/184 (30%), Gaps = 29/184 (15%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWK 68
            L L SGG DS       + R  +V    F+ G         +    + +K         
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQTAYYLWQKYGSSAKVRF 239

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            ++  + ++   +                  +             +F+  A  +A + GI
Sbjct: 240 IAIDFEPVVAEIL------------------EKIDDGQMGVVLKRMFMRAAGMVAEKFGI 281

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G      S         I  +   +         +  PL+   K +  +LA++IG
Sbjct: 282 QALVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIIRLAREIG 332

Query: 189 GQDL 192
            +D 
Sbjct: 333 TEDF 336


>gi|258624380|ref|ZP_05719328.1| thiamin biosynthesis protein ThiI [Vibrio mimicus VM603]
 gi|258583342|gb|EEW08143.1| thiamin biosynthesis protein ThiI [Vibrio mimicus VM603]
          Length = 483

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 56/184 (30%), Gaps = 29/184 (15%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWK 68
            L L SGG DS       + R  +V    F+ G         +    + +K         
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQTAYYLWQKYGSSAKVRF 239

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            ++  + ++   +                  +             +F+  A  +A + GI
Sbjct: 240 IAIDFEPVVAEIL------------------EKIDDGQMGVVLKRMFMRAAGMVAEKFGI 281

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G      S         I  +   +         +  PL+   K +  +LA++IG
Sbjct: 282 QALVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIIRLAREIG 332

Query: 189 GQDL 192
            +D 
Sbjct: 333 TEDF 336


>gi|257452558|ref|ZP_05617857.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
           [Fusobacterium sp. 3_1_5R]
 gi|317059098|ref|ZP_07923583.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium sp. 3_1_5R]
 gi|313684774|gb|EFS21609.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium sp. 3_1_5R]
          Length = 350

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 53/177 (29%), Gaps = 17/177 (9%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +  SGG DSST       +   +  ++                  KK+ E      D   
Sbjct: 17  VALSGGVDSSTVAYLLKKQGYDIFGVTM-------KTCHAEDADAKKVCE------DLGI 63

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           + ++L L              V   ++        V  R  I            G   + 
Sbjct: 64  DHYVLDLTEPFSEKVMDYF--VEEYMRGKTPNPCMVCNR-HIKFGKLLDFILGQGAQYMA 120

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLAQDIG 188
            G       G+     D  +     ++   +  +  +  P+  L+K +  +LA+++G
Sbjct: 121 TGHYTKLVDGHLSVGDDGGKDQVYFLSQVPKEKLKKIIFPVGELEKIQVRELAKELG 177


>gi|116490973|ref|YP_810517.1| argininosuccinate synthase [Oenococcus oeni PSU-1]
 gi|118586470|ref|ZP_01543915.1| argininosuccinate synthase [Oenococcus oeni ATCC BAA-1163]
 gi|122276845|sp|Q04FC0|ASSY_OENOB RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|116091698|gb|ABJ56852.1| argininosuccinate synthase [Oenococcus oeni PSU-1]
 gi|118433093|gb|EAV39814.1| argininosuccinate synthase [Oenococcus oeni ATCC BAA-1163]
          Length = 406

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 1/68 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           A   +L +SGG D+S  + W  D+   V  +S D GQ +  ++E       KI  +   
Sbjct: 1  MADKIVLAYSGGLDTSVAIPWLKDKGYEVIAVSLDVGQ-HGKQIENIQKKALKIGAIQSF 59

Query: 67 WKDSLGED 74
            D   E 
Sbjct: 60 IIDGKDEF 67


>gi|307213208|gb|EFN88703.1| GMP synthase [glutamine-hydrolyzing] [Harpegnathos saltator]
          Length = 718

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 2/63 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               LLL SGG DS+ C +        ++V  L  + G   K E +       ++   + 
Sbjct: 240 NKKVLLLVSGGVDSTVCAALLHKALSKEQVIALHINNGFMRKGETQSVEQSLAQLGVKLK 299

Query: 66  KWK 68
              
Sbjct: 300 VVN 302


>gi|258543643|ref|YP_003189076.1| tRNA-specific 2-thiouridylase MnmA [Acetobacter pasteurianus IFO
           3283-01]
 gi|256634721|dbj|BAI00697.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Acetobacter pasteurianus IFO 3283-01]
 gi|256637777|dbj|BAI03746.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Acetobacter pasteurianus IFO 3283-03]
 gi|256640831|dbj|BAI06793.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Acetobacter pasteurianus IFO 3283-07]
 gi|256643886|dbj|BAI09841.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Acetobacter pasteurianus IFO 3283-22]
 gi|256646941|dbj|BAI12889.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Acetobacter pasteurianus IFO 3283-26]
 gi|256649994|dbj|BAI15935.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Acetobacter pasteurianus IFO 3283-32]
 gi|256652984|dbj|BAI18918.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256656038|dbj|BAI21965.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Acetobacter pasteurianus IFO 3283-12]
          Length = 360

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 47/185 (25%), Gaps = 9/185 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DSS   +  L+    V   +           +   C  + I +       
Sbjct: 2   RILVAMSGGVDSSVVAARLLEEGHEVVGATLQLYDSRGAAKKGACCAGQDIRDARAVADL 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                +++           S+ +  A        P   V     +       LA  +G  
Sbjct: 62  LGFPHYVID---AERRFKDSVIERFADAYASGETPVPCVACNQGVKFTDLLGLAREIGAD 118

Query: 130 NIVIGVCETDYSGYP--DCRHDTIRAIETAINLGMESHVTVHTPLMWL----KKYETWKL 183
            +  G       G    +         + +  L   +   +      L     K    K 
Sbjct: 119 AMATGHYVRRVEGPDGAELHRPCDEDRDQSWFLFATTRDQLEFLRFPLGDMPDKAAVRKE 178

Query: 184 AQDIG 188
           A+  G
Sbjct: 179 AERFG 183


>gi|14521864|ref|NP_127340.1| hypothetical protein PAB1092 [Pyrococcus abyssi GE5]
 gi|5459084|emb|CAB50570.1| Predicted ATPase of the PP-loop superfamilyl [Pyrococcus abyssi
           GE5]
          Length = 303

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 26/71 (36%), Gaps = 2/71 (2%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD--YGQRNKVELECRLCVRKK 59
             ++KK    L+  SGG+DS+            +E L  +   G+ +K   E      + 
Sbjct: 41  YKLLKKDEKILVAVSGGKDSAVTAYVLNKLGYNIECLHINLGIGEYSKKSEEYAKKQCEL 100

Query: 60  IVELMPKWKDS 70
           I   +   +  
Sbjct: 101 IGAPLHIVRIK 111


>gi|319787135|ref|YP_004146610.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudoxanthomonas suwonensis 11-1]
 gi|317465647|gb|ADV27379.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudoxanthomonas suwonensis 11-1]
          Length = 373

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 48/191 (25%), Gaps = 11/191 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +  AP  ++  SGG DSS          + +  L       +          R+  V + 
Sbjct: 1   MSTAPRTVVGVSGGVDSSVAAWLLAQSGEPLAGLFMQNWDDDGSGECRAEEDRRDAVAVC 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            +                     + + ++   +      PN  V     +        A 
Sbjct: 61  GRLGIP------FHFRDFSKEYWAGVFEHFLAEYAAGRTPNPDVLCNREVKFKHFLDAAR 114

Query: 125 RLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            LG   I  G            R                 LG         P+  L K E
Sbjct: 115 ELGAERIATGHYAQVLHEGGRWRLLRGADRDKDQTYFLHQLGQAQLAATLFPIGHLPKAE 174

Query: 180 TWKLAQDIGGQ 190
             +LA++ G  
Sbjct: 175 VRRLAREAGLP 185


>gi|317124173|ref|YP_004098285.1| GMP synthase (glutamine-hydrolyzing) [Intrasporangium calvum DSM
           43043]
 gi|315588261|gb|ADU47558.1| GMP synthase (glutamine-hydrolyzing) [Intrasporangium calvum DSM
           43043]
          Length = 527

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 57/187 (30%), Gaps = 11/187 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS   +       D++  +  D+G   + E      V K  VE    
Sbjct: 222 EDRVLCALSGGVDSSVAAALVQRAVGDQLTCVFVDHGLLREGE---AEQVEKDFVEAT-- 276

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G D ++  A    ++  +       K +        V  +    +V +       
Sbjct: 277 -----GVDLVVVDAQERFLTALAGVTEPEAKRKIIGEQFIRVFEQAARDVVGSHADEEHP 331

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +               I++      L  +    +  PL  L K E  ++  +
Sbjct: 332 VKWLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPDDLQFKLIEPLRTLFKDEVRQVGLE 391

Query: 187 IGGQDLV 193
           +G  +++
Sbjct: 392 LGVPEVI 398


>gi|302544557|ref|ZP_07296899.1| GMP synthase (Glutamine amidotransferase) [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302462175|gb|EFL25268.1| GMP synthase (Glutamine amidotransferase) [Streptomyces
           himastatinicus ATCC 53653]
          Length = 528

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 56/185 (30%), Gaps = 11/185 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              A+   SGG DS+   +       D++  +  D+G   K E E          ++   
Sbjct: 223 TKRAICGLSGGVDSAVAAALVQKAIGDQLTCVYVDHGLMRKGESE----------QVEKD 272

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  + G    +  A    +   +   +   K +        V  +    LV  A  A   
Sbjct: 273 FVAATGVQLKVVEAEQRFLDALAGVSDPEEKRKIIGREFIRVFEQAQAELVAEAGAAGEA 332

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +               I++      L  +    +  PL  L K E   + Q+
Sbjct: 333 VEFLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPDDIEFQLVEPLRRLFKDEVRNVGQE 392

Query: 187 IGGQD 191
           +G  +
Sbjct: 393 LGLPE 397


>gi|163815111|ref|ZP_02206492.1| hypothetical protein COPEUT_01267 [Coprococcus eutactus ATCC 27759]
 gi|158449520|gb|EDP26515.1| hypothetical protein COPEUT_01267 [Coprococcus eutactus ATCC 27759]
          Length = 363

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 52/193 (26%), Gaps = 7/193 (3%)

Query: 3   DIIKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
            +I      + +  SGG DSS       ++   V  ++    Q    ++         + 
Sbjct: 2   KLIDTDKKTVCVGMSGGVDSSVAALLLKEQGYNVIGVTMQIWQDEDRDVVSAHAGCCGLS 61

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
            +    + +   D    +    +     +      + +    PN  +     +      T
Sbjct: 62  AVDDARRVASQLDIPYYVMNFKEEFKKYVIDYFVDEYKHGRTPNPCIACNRYVKWESLLT 121

Query: 122 LAYRLGITNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
               +G   I  G                + R           NL  E       P+   
Sbjct: 122 RCMAIGGDYIATGHYARIIQLPNGRYTLQEARGIDKDQTYALYNLTQEQLARTLMPVGEY 181

Query: 176 KKYETWKLAQDIG 188
            K E  K+A+D G
Sbjct: 182 SKPEIRKIAEDHG 194


>gi|323702190|ref|ZP_08113857.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Desulfotomaculum nigrificans DSM 574]
 gi|323532877|gb|EGB22749.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Desulfotomaculum nigrificans DSM 574]
          Length = 366

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/196 (11%), Positives = 50/196 (25%), Gaps = 13/196 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIV 61
           +      +   SGG DSS   +    +   V  ++    D             C    + 
Sbjct: 1   MTTKGKVIAAMSGGVDSSVTAALLQQQGYEVVGVTMQIWDPDVTVVDGDYVGCCSLSAVD 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +            ++       ++    + +    +      PN  +     I       
Sbjct: 61  DARRVANILGIPYYVFN---FRELFTEKVIQYFVDEYLRGRTPNPCIACNRFIKFEALLQ 117

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-------ESHVTVHTPLMW 174
            A ++G   I  G            R+   +A +   +          +       PL  
Sbjct: 118 KARQMGFDYIATGHYARLGYSEEYKRYTVRKARDERKDQTYVLYGFTQDQIAHTLMPLAD 177

Query: 175 LKKYETWKLAQDIGGQ 190
             K +  ++A+  G  
Sbjct: 178 YTKEQVREMARRWGLP 193


>gi|262306089|gb|ACY45637.1| gln amidotransferase [Peripatus sp. 'Pep']
          Length = 197

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 25/66 (37%), Gaps = 2/66 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K    L+L SGG DS+ C +      +  +V  +  D G   K E E       KI   +
Sbjct: 42  KDNKVLMLVSGGVDSTVCAALLHKALKRHQVIAVHIDNGFMRKKESEQVENSLNKIGLKL 101

Query: 65  PKWKDS 70
                S
Sbjct: 102 KVVNAS 107


>gi|261749248|ref|YP_003256933.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Blattabacterium sp. (Periplaneta americana) str. BPLAN]
 gi|261497340|gb|ACX83790.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Blattabacterium sp. (Periplaneta americana) str. BPLAN]
          Length = 511

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 57/187 (30%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +L FSGG DS            D +  +  D G   + E E    + KK+      
Sbjct: 216 SKKVILGFSGGVDSFVAAYIIHQAIGDSLHCIFVDTGFLLEKEKEKISHICKKMN----- 270

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     + +    +   SSLT  +  +++   +   F+                  
Sbjct: 271 --------FSIKIIDARERFLSSLTGVIDPEMKRKIIGKEFISIFQQESEKIKNVEFLAQ 322

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G       +           ++ +I++      L     + +  PL  L K E   L ++
Sbjct: 323 G------TIYPDVIESSIFHKNFSIKSHHNVGGLPYFMKLKLLEPLKELFKDEVRNLGKE 376

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 377 LGIPKEI 383


>gi|237756601|ref|ZP_04585118.1| thiamine biosynthesis protein [Sulfurihydrogenibium
          yellowstonense SS-5]
 gi|237691232|gb|EEP60323.1| thiamine biosynthesis protein [Sulfurihydrogenibium
          yellowstonense SS-5]
          Length = 355

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 26/79 (32%), Gaps = 4/79 (5%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ----RNKVELECRLCVRKKIVE 62
              A+ L+SGG DS+  +    ++   V  L F  G       +   E +      I  
Sbjct: 1  MKRKAVALYSGGLDSTLAIKLVQNQGIDVLALHFYTGFCITETKRRRGEKKEDGSHYINP 60

Query: 63 LMPKWKDSLGEDHILPLAI 81
           +           I+ ++ 
Sbjct: 61 ALKFAAKYGFPLEIVDISD 79


>gi|223986594|ref|ZP_03636589.1| hypothetical protein HOLDEFILI_03911 [Holdemania filiformis DSM
           12042]
 gi|223961453|gb|EEF65970.1| hypothetical protein HOLDEFILI_03911 [Holdemania filiformis DSM
           12042]
          Length = 513

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 52/185 (28%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS   +        ++  +  D+G   K E      V +     M  
Sbjct: 215 TDKVLLALSGGVDSSVVAALLHKAIGPQLYCMFIDHGLLRKGE---AESVMETFGRNMKL 271

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +       L  L  +S     + +                            A   
Sbjct: 272 NLTKIDASKKF-LDKLKGVSDPEQKRKIIGNEFVYTFDEEVKKL------------AEGE 318

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  +  G   TD          TI++      L  +    +  PL  L K E  +L ++
Sbjct: 319 NIHWLAQGTLYTDVIESGTQTAQTIKSHHNVGGLPEDMQFQLIEPLNTLFKDEVRQLGKE 378

Query: 187 IGGQD 191
           +G  D
Sbjct: 379 LGLPD 383


>gi|262274766|ref|ZP_06052577.1| thiamine biosynthesis protein ThiI [Grimontia hollisae CIP 101886]
 gi|262221329|gb|EEY72643.1| thiamine biosynthesis protein ThiI [Grimontia hollisae CIP 101886]
          Length = 482

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 56/184 (30%), Gaps = 29/184 (15%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWK 68
            L L SGG DS       + R  +V    F+ G         +    + +K         
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGAAHEIGVQQTAYYLWEKYG------- 232

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                      +       S   + V  +I +             +F+  A+ LA + GI
Sbjct: 233 -----------SSAKVKFVSVDFEPVVAEILEKVDDGQMGVILKRMFMRAASMLAEKFGI 281

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G      S         I  +   +         +  PL+   K +   LA++IG
Sbjct: 282 QALVTGEALGQVSSQTLTNLRHIDNVSDTL---------ILRPLINWDKEDIINLAREIG 332

Query: 189 GQDL 192
            +D 
Sbjct: 333 TEDF 336


>gi|254880932|ref|ZP_05253642.1| tRNA-specific 2-thiouridylase mnmA 3 [Bacteroides sp. 4_3_47FAA]
 gi|294775009|ref|ZP_06740538.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides vulgatus PC510]
 gi|319639940|ref|ZP_07994667.1| tRNA-specific 2-thiouridylase mnmA 3 [Bacteroides sp. 3_1_40A]
 gi|254833725|gb|EET14034.1| tRNA-specific 2-thiouridylase mnmA 3 [Bacteroides sp. 4_3_47FAA]
 gi|294451053|gb|EFG19524.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides vulgatus PC510]
 gi|317388218|gb|EFV69070.1| tRNA-specific 2-thiouridylase mnmA 3 [Bacteroides sp. 3_1_40A]
          Length = 375

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 50/190 (26%), Gaps = 8/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  +    L+  SGG DSS       ++   V  ++                    ++E 
Sbjct: 1   MNNRDKRVLVGMSGGIDSSATCIMLQEQGYEVVGVTMRTWDVPSRFSTPGQDEPDDVLEA 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
               +    E H+  +    +     + K+   +      PN  V    +         A
Sbjct: 61  RALAERLGIEHHVADV---REEFKQIIVKHFIDEYMQGRTPNPCVLCNPLFKERILCEWA 117

Query: 124 YRLGITNI----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW-LKKY 178
            +    +I       + E     Y     D  +     +    +  +      +    K 
Sbjct: 118 DQTNCAHISTGHYCRLEERKGKLYIVAGDDQTKDQSYFLWKLPQEILQRFLFPLGTYTKQ 177

Query: 179 ETWKLAQDIG 188
           E  +  +  G
Sbjct: 178 EVREYLRQKG 187


>gi|56694946|ref|YP_165291.1| argininosuccinate synthase [Ruegeria pomeroyi DSS-3]
 gi|61211384|sp|Q5LWG3|ASSY_SILPO RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|56676683|gb|AAV93349.1| argininosuccinate synthase [Ruegeria pomeroyi DSS-3]
          Length = 409

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 44/157 (28%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W   +    V T + D GQ  ++E        + +   
Sbjct: 1   MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEP--ARKKAELLGIK 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                     +  +           +      + +   ++    +  R +         A
Sbjct: 59  PENIHIEDVREEFV--RDFVFPMFRANAVYEGLYLLGTSIARPLISKRLVEIAAEHGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         + S Y       + A     +L
Sbjct: 117 VAHGATGKGNDQVRFELSAYALNPEIRVIAPWRLWDL 153


>gi|44887702|sp|Q7UFW4|ASSY_RHOBA RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|327540936|gb|EGF27494.1| argininosuccinate synthase [Rhodopirellula baltica WH47]
          Length = 404

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 44/148 (29%), Gaps = 5/148 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            S +L +SGG D+S  L W  D+   V  +  D GQ      E R  + +K      K  
Sbjct: 2   KSCVLAYSGGLDTSVILGWLQDQGYEVHCVYVDLGQ----PCEDRDAIMEKARTCGAK-S 56

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             L +              +   K   + +   ++    +    +         AY  G 
Sbjct: 57  SRLVDVREELCRDFAFPVLAWQAKYEQIYLLGTSIARPLISKVCLEVAREVGATAYAHGA 116

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIET 156
           T      C    +      +  + A   
Sbjct: 117 TGKGNDQCRFQLAAEALDPNIEMIAPWR 144


>gi|304394517|ref|ZP_07376438.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ahrensia sp. R2A130]
 gi|303293427|gb|EFL87806.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ahrensia sp. R2A130]
          Length = 406

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 37/128 (28%), Gaps = 4/128 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS       ++   V  ++   Y     V+ +   C  + I +     +
Sbjct: 16  RVVVAMSGGVDSSVVACLLKEQGYEVLGMTLQLYDHGAAVQKKGACCAGQDIHDARRVSE 75

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L            +    A    +   P   V     +      T A  LG 
Sbjct: 76  QMGFPHYVLD---YEQKFREQVIDPFAKAYINGETPIPCVACNQTVKFSDLLTTARELGA 132

Query: 129 TNIVIGVC 136
             +  G  
Sbjct: 133 DCLATGHY 140


>gi|254506120|ref|ZP_05118264.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio parahaemolyticus 16]
 gi|219550938|gb|EED27919.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio parahaemolyticus 16]
          Length = 374

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 38/140 (27%), Gaps = 6/140 (4%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +VE L     + +  E  C     + +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYQVEGLFMKNWEEDDNEEYC--TAAEDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +            H +      +   +     +A            +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIHLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDY 140
                L    I +G      
Sbjct: 115 FADEVLDADYIAMGHYVRRT 134


>gi|168700409|ref|ZP_02732686.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Gemmata obscuriglobus UQM 2246]
          Length = 357

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 53/181 (29%), Gaps = 5/181 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +L  SGG DSS        +   V  L    G     + + R   +K     +     
Sbjct: 3   RVVLAMSGGVDSSASAVLLKKQGHEVIGLFMRTGTHGHDQPDERRDNKKGCCSAIDAGDA 62

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFVPGRNIIFLVFAATLAYRL 126
               D  L +        S   + +     +      PN  V   N +      T   +L
Sbjct: 63  RRVADK-LDIPFYALDFESEFNRIIDYFADEYVRGRTPNPCVVCNNWLKFGQLWTFGQKL 121

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAIN-LGMESHVTVHTPLMWLKKYETWKLAQ 185
           G   I  G      +G      D  +     ++ +  E    +  P+    K +  + A+
Sbjct: 122 GADFIATGHYAQVRNGELHKGVDADKDQSYVLHGIKREVLPHLLFPVGGYTKPQIRQFAR 181

Query: 186 D 186
           +
Sbjct: 182 E 182


>gi|145641596|ref|ZP_01797173.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae R3021]
 gi|145273643|gb|EDK13512.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae 22.4-21]
          Length = 485

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W+  
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWQRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + + V        L    V   + +        A R  I  
Sbjct: 232 SASHKVRFIAINFEGVVGEILEKVDNGQMGVVLKRMMVRAASKV--------AQRFNIEA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I     A+         V  PL+   K +   +A++IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDEAADAL---------VLRPLITHDKEQIIAMAKEIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|329926781|ref|ZP_08281189.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Paenibacillus sp. HGF5]
 gi|328938981|gb|EGG35349.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Paenibacillus sp. HGF5]
          Length = 389

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 49/199 (24%), Gaps = 15/199 (7%)

Query: 1   MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCV 56
           M   + K       ++  SGG DSS        +   V  +   ++   +++        
Sbjct: 17  MVITMSKEKHNTRIVVGMSGGVDSSVTALLLKQQGYEVIGIFMKNWDDTDELGYCTAEAD 76

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
            + +  +  +            +    +      +  +             +  R  I  
Sbjct: 77  AEDVRRVCEQLDIPYYT-----VNFEKEYFDKVFSYFLDEYKAGRTPNPDVMCNRE-IKF 130

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTP 171
                 A  LG   +  G            R                 L  E       P
Sbjct: 131 GEFLNKAMDLGADYVATGHYARVIEEDGQYRLLRGVDSNKDQTYFLNALSQEQLSKAMFP 190

Query: 172 LMWLKKYETWKLAQDIGGQ 190
           +  L K E  +LA++ G  
Sbjct: 191 IGHLPKPEVRRLAEEAGLY 209


>gi|322419745|ref|YP_004198968.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Geobacter sp. M18]
 gi|320126132|gb|ADW13692.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Geobacter sp. M18]
          Length = 356

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/77 (12%), Positives = 27/77 (35%), Gaps = 2/77 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVE 62
          + +    ++  SGG DSS   +   ++   V  +S    +R +  +           +++
Sbjct: 1  MSEKKRIVVAMSGGVDSSVTAALLKEQGHDVIGVSLQLYERPEQTVSGGKTCCSLTDVMD 60

Query: 63 LMPKWKDSLGEDHILPL 79
               +       ++ L
Sbjct: 61 AARVARRLGIPFQVIDL 77


>gi|163747144|ref|ZP_02154500.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Oceanibulbus indolifex HEL-45]
 gi|161379705|gb|EDQ04118.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Oceanibulbus indolifex HEL-45]
          Length = 380

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/184 (11%), Positives = 46/184 (25%), Gaps = 6/184 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +   D    V  ++   Y     +  +   C    I +     +
Sbjct: 22  RVVVAMSGGVDSSVVAAMLADEGYDVVGVTLQLYDHGAALAKKGACCAGVDIQDARRVAE 81

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +     ++L    +   +      +  +                   L+  A        
Sbjct: 82  EMGFPHYVLDYENVFKDAVIDEFADSYLGGATPVPCIRCNERVKFKDLLETAKDLEA-DC 140

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL----KKYETWKLA 184
                 +        P+         + +  L   +   +      L     K +T  LA
Sbjct: 141 MATGHYIQRKMGENGPELHAAADGNRDQSYFLFSTTEEQLDYLRFPLGHLPSKDDTRALA 200

Query: 185 QDIG 188
              G
Sbjct: 201 AKYG 204


>gi|89890355|ref|ZP_01201865.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Flavobacteria bacterium BBFL7]
 gi|89517270|gb|EAS19927.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Flavobacteria bacterium BBFL7]
          Length = 392

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 48/185 (25%), Gaps = 12/185 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS       ++   V  L       + V +       +   + M     
Sbjct: 3   KVVVGLSGGVDSSVAAYLLKEQGHEVIGLFMKNWHDDTVTISDECPWLEDSNDAMLVADK 62

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                  +    L +     +   +  +      PN  V     I       +A  LG  
Sbjct: 63  LGIPFQTVD---LSEQYKERIVDYMFDEYARGRTPNPDVLCNREIKFDVFMDIALELGAD 119

Query: 130 NIVIGVCETDYSGYPDCRHDTI---------RAIETAINLGMESHVTVHTPLMWLKKYET 180
            +  G      +   D +                     +  E       P+  L+K E 
Sbjct: 120 YVATGHYCQKTTTMIDGKEIHHLIGGADLNKDQSYFLCQVSQEQLARTIFPIGHLQKPEV 179

Query: 181 WKLAQ 185
            ++A 
Sbjct: 180 REIAA 184


>gi|89902516|ref|YP_524987.1| tRNA-specific 2-thiouridylase MnmA [Rhodoferax ferrireducens T118]
 gi|122478272|sp|Q21RZ7|MNMA_RHOFD RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|89347253|gb|ABD71456.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhodoferax ferrireducens T118]
          Length = 384

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 37/155 (23%), Gaps = 6/155 (3%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN         ++  SGG DS+        +   V  +     + +     C   V    
Sbjct: 1   MNKR-HSGQRVVVGLSGGVDSAVTAWLLKQQGYEVIGIFMKNWEDDDDSEYCSSNV--DF 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           ++          E   +            +      + Q    PN  +     I      
Sbjct: 58  IDAAAVADVIGIEIEHVN---FAAEYKDRVFAEFLREYQAGRTPNPDILCNAEIKFKAFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIE 155
             A RLG   I  G          D R       +
Sbjct: 115 DHALRLGAQKIATGHYARVRCVAADGRVLDAAQAQ 149


>gi|146306426|ref|YP_001186891.1| argininosuccinate synthase [Pseudomonas mendocina ymp]
 gi|166221009|sp|A4XS43|ASSY_PSEMY RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|145574627|gb|ABP84159.1| argininosuccinate synthase [Pseudomonas mendocina ymp]
          Length = 405

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 59/205 (28%), Gaps = 13/205 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MADVKKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQALGVKEI 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +         + T      +   ++    +  R I         A
Sbjct: 61  ------YIDDLREEFVRDFVYPMFRANTIYEGEYLLGTSIARPLIAKRLIEIANETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN------LGMESHVTVHTPLMWLKK 177
              G T         +   Y       + A     +      L   +           KK
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHAIPIERHGKK 174

Query: 178 YETWKLAQDIGGQDLVNLILEESHT 202
              + +  ++        +LE++ T
Sbjct: 175 KSPYSMDANLLHISYEGGVLEDTWT 199


>gi|319936290|ref|ZP_08010708.1| GMP synthase domain-containing protein [Coprobacillus sp. 29_1]
 gi|319808666|gb|EFW05210.1| GMP synthase domain-containing protein [Coprobacillus sp. 29_1]
          Length = 433

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 55/183 (30%), Gaps = 20/183 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +  +     ++  +  ++G   K E E  + V +  ++    +
Sbjct: 139 KKVLLALSGGVDSSVVAALLVKAIGKQLYCVHVNHGLMRKGESEDVVEVFQNQLDANLVY 198

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D+           L  + + +  +     I    +       R +             G
Sbjct: 199 VDAT-------ERFLTKLENVADPEQKRKIIGAEFIRVFEEEARKLD------------G 239

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           +++      L  +    +  PL  L K E      ++
Sbjct: 240 IEFLAQGTIYPDIIESGTKTAKMVKSHHNVGGLPEDLQFELVEPLFQLFKDEVRACGVEL 299

Query: 188 GGQ 190
           G  
Sbjct: 300 GLP 302


>gi|209695634|ref|YP_002263563.1| tRNA-specific 2-thiouridylase MnmA [Aliivibrio salmonicida LFI1238]
 gi|208009586|emb|CAQ79882.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Aliivibrio salmonicida LFI1238]
          Length = 374

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 37/140 (26%), Gaps = 6/140 (4%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +VE L     + +  E  C     + +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYQVEGLFMKNWEEDDNEEYC--TAAEDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +            H +      +   +     +             +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIHLHTIN--FAAEYWDNVFEYFLEEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDY 140
                L    I +G      
Sbjct: 115 FADEVLDADFIAMGHYVRRT 134


>gi|197336343|ref|YP_002156606.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio fischeri MJ11]
 gi|229487426|sp|B5FG83|MNMA_VIBFM RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|197317833|gb|ACH67280.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio fischeri MJ11]
          Length = 374

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 37/140 (26%), Gaps = 6/140 (4%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +VE L     + +  E  C     + +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYQVEGLFMKNWEEDDNEEYC--TAAEDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +            H +      +   +     +             +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIHLHTIN--FAAEYWDNVFEYFLEEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDY 140
                L    I +G      
Sbjct: 115 FADEVLDADFIAMGHYVRRT 134


>gi|167527119|ref|XP_001747892.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163773641|gb|EDQ87279.1| predicted protein [Monosiga brevicollis MX1]
          Length = 666

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 24/64 (37%), Gaps = 2/64 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             AL+L SGG DSS C +        +RV  L  D G     E        +++   +  
Sbjct: 219 KKALVLVSGGVDSSVCAALLNKAVGHERVVALHIDNGFMRLDESVKVKVSLERLGLPLHV 278

Query: 67  WKDS 70
              S
Sbjct: 279 IDAS 282


>gi|59712391|ref|YP_205167.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio fischeri ES114]
 gi|71658019|sp|Q5E3W7|MNMA_VIBF1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|59480492|gb|AAW86279.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio fischeri ES114]
          Length = 374

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 37/140 (26%), Gaps = 6/140 (4%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +VE L     + +  E  C     + +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYQVEGLFMKNWEEDDNEEYC--TAAEDL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +            H +      +   +     +             +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIHLHTIN--FAAEYWDNVFEYFLEEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDY 140
                L    I +G      
Sbjct: 115 FADEVLDADFIAMGHYVRRT 134


>gi|16330399|ref|NP_441127.1| tRNA-specific 2-thiouridylase MnmA [Synechocystis sp. PCC 6803]
 gi|3122978|sp|P73755|MNMA_SYNY3 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|1652889|dbj|BAA17807.1| sll0844 [Synechocystis sp. PCC 6803]
          Length = 358

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 43/159 (27%), Gaps = 8/159 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS   +    +   V  ++        +      C  + +V+    
Sbjct: 1   MTQKVVVGLSGGVDSSVAAALLHRQGYAVVGVTL------WLMKGKGQCCSEGLVDAASI 54

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +       I+    L              +       +          ++  A     L
Sbjct: 55  CEQLGVPHEIVDTRDLFQNHIIDYLVQGYGEGVTPLPCSQCNKAVKFGPMLQYA--QQSL 112

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH 165
           GI  I  G            R++ +RA++   +     +
Sbjct: 113 GIDKIATGHYARIRFNEASQRYELLRAVDRQKDQSYFLY 151


>gi|312070856|ref|XP_003138339.1| hypothetical protein LOAG_02754 [Loa loa]
 gi|307766493|gb|EFO25727.1| hypothetical protein LOAG_02754 [Loa loa]
          Length = 383

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 14/41 (34%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR 45
          +K+    +   SGG DS+        R   V  +      R
Sbjct: 1  MKQIRKVVCAISGGVDSAVSAYLLKKRGFDVIGVHMVNWDR 41


>gi|262306007|gb|ACY45596.1| gln amidotransferase [Abacion magnum]
          Length = 197

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              L+L SGG DS+ C +      + D+V  L  D G   K E +  +    KI   +  
Sbjct: 44  NKVLMLLSGGVDSTVCAALLHKALKDDQVIALHIDNGFMRKSESQQVVASLNKIGLKVEV 103

Query: 67  WK 68
             
Sbjct: 104 IN 105


>gi|221233878|ref|YP_002516314.1| tRNA-specific 2-thiouridylase MnmA [Caulobacter crescentus NA1000]
 gi|220963050|gb|ACL94406.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Caulobacter crescentus NA1000]
          Length = 410

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 54/188 (28%), Gaps = 12/188 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +        V  ++   Y     +  +   C  + I++     +
Sbjct: 39  RIVAAMSGGVDSTVTAALLARAGYDVVGVTLQLYDHGAAISRKGACCAGQDILDARMAAE 98

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L            + ++ A        P   V     +       +A  LG 
Sbjct: 99  RIGIPHYVLD---YESRFREQVIEDFADAYLRGETPIPCVRCNQTVKFRDLLDVARDLGA 155

Query: 129 TNI-----VIGVCETDYSGYPDCRHDTIRAIETAINL---GMESHVTVHTPLMWLKKYET 180
             +     V      +    P+ R     A + +  L     E    +  PL  + K   
Sbjct: 156 EAMATGHYVQRAMPGNGGNRPELRRAADPAKDQSYFLFATTREQLDFLRFPLGGMDKPTV 215

Query: 181 WKLAQDIG 188
             +A  +G
Sbjct: 216 RAVAAGLG 223


>gi|16125150|ref|NP_419714.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Caulobacter crescentus CB15]
 gi|14195261|sp|P58074|MNMA_CAUCR RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|13422162|gb|AAK22882.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Caulobacter crescentus CB15]
          Length = 383

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 54/188 (28%), Gaps = 12/188 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +        V  ++   Y     +  +   C  + I++     +
Sbjct: 12  RIVAAMSGGVDSTVTAALLARAGYDVVGVTLQLYDHGAAISRKGACCAGQDILDARMAAE 71

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L            + ++ A        P   V     +       +A  LG 
Sbjct: 72  RIGIPHYVLD---YESRFREQVIEDFADAYLRGETPIPCVRCNQTVKFRDLLDVARDLGA 128

Query: 129 TNI-----VIGVCETDYSGYPDCRHDTIRAIETAINL---GMESHVTVHTPLMWLKKYET 180
             +     V      +    P+ R     A + +  L     E    +  PL  + K   
Sbjct: 129 EAMATGHYVQRAMPGNGGNRPELRRAADPAKDQSYFLFATTREQLDFLRFPLGGMDKPTV 188

Query: 181 WKLAQDIG 188
             +A  +G
Sbjct: 189 RAVAAGLG 196


>gi|315452550|ref|YP_004072820.1| Arginino succinate synthase [Helicobacter felis ATCC 49179]
 gi|315131602|emb|CBY82230.1| Arginino succinate synthase [Helicobacter felis ATCC 49179]
          Length = 352

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 30/101 (29%), Gaps = 2/101 (1%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL LFSGG DS   +     +   V  L F+ G       + R  + K   ++  +   
Sbjct: 2   KALALFSGGLDSLLSMHLVASQGIEVIALHFNIGF--GGNKDKREYLEKASAQVGAQLLL 59

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPG 110
              ++      +           N  +    N     F   
Sbjct: 60  CDIQEQFFDEVLFKPKYGYGKYFNPCIDCHANMFRQAFYKL 100


>gi|310659055|ref|YP_003936776.1| pp-loop superfamily ATP-utilizing protein [Clostridium sticklandii
           DSM 519]
 gi|308825833|emb|CBH21871.1| ATP-utilizing enzyme of the PP-loop superfamily (modular protein)
           [Clostridium sticklandii]
          Length = 428

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 52/209 (24%), Gaps = 46/209 (22%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           IKK    ++ FSGG DSS  L         D V  ++       + E    + +   I  
Sbjct: 177 IKKDKKVVVAFSGGVDSS-LLINLCKEVLKDEVVAVTVKGPHIPESEFNEAVKLANAIGI 235

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                ++ +     +    L                                   +    
Sbjct: 236 KHEIVEEDILSIKEVREGDLR-----------------------RCYYCKSFVFKYIDDY 272

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A ++G + +  G    D S Y                     HV          K +  +
Sbjct: 273 AKKIGASAVYDGSNIDDLSDYRPGMQALEE-----------LHVKSPFLETNWTKSDIRE 321

Query: 183 LAQDIG---------GQDLVNLILEESHT 202
            ++ +G            +  +   ++ T
Sbjct: 322 YSKLLGLKTHDKEAAACLISRVSYGQTIT 350


>gi|154173866|ref|YP_001408766.1| tRNA-specific 2-thiouridylase MnmA [Campylobacter curvus 525.92]
 gi|205811591|sp|A7GZX4|MNMA_CAMC5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|112802625|gb|EAT99969.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter curvus 525.92]
          Length = 339

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 56/179 (31%), Gaps = 11/179 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DS+       +    +E       Q+     E    V KK+ E +     
Sbjct: 2   KIMVAMSGGVDSTMTAKILKEAGHEIEGCYMKLHQKPGYHEENIRKV-KKVGEYL----- 55

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              + HIL    L D  +  +        ++   PN        I L      A + G  
Sbjct: 56  -GIKVHILD---LQDKFNEFVYDPFVRLYKEGKTPNPCALCNRFIKLGALLNFAKQNGCE 111

Query: 130 NIVIGVCETDYSGY-PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            +  G       G+    +  +         +  E    V  PL    K +  +LA+++
Sbjct: 112 KLATGHYVQIIDGFVTMAKDPSKDQSYFLAQVPKEVLKDVIFPLGDKFKADIKELAREV 170


>gi|91773296|ref|YP_565988.1| thiamine biosynthesis protein [Methanococcoides burtonii DSM 6242]
 gi|91712311|gb|ABE52238.1| RNA binding protein containing THUMP domain [Methanococcoides
           burtonii DSM 6242]
          Length = 309

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 3/57 (5%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           ++L SGG DS       + R  +V  +   Y        +  L    K VE + KW 
Sbjct: 183 IVLMSGGIDSPVAAWLMMKRGVKVIPV---YANNIPFSDDRALERAIKAVERLQKWS 236


>gi|58698498|ref|ZP_00373403.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Wolbachia endosymbiont of Drosophila ananassae]
 gi|225630917|ref|YP_002727708.1| tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Wolbachia sp. wRi]
 gi|254811470|sp|C0R4S5|MNMA_WOLWR RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|58534992|gb|EAL59086.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Wolbachia endosymbiont of Drosophila ananassae]
 gi|225592898|gb|ACN95917.1| tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Wolbachia sp. wRi]
          Length = 370

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 57/182 (31%), Gaps = 8/182 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
            A++  SGG DSS   +   +   +V  ++   YG           C   + +    +  
Sbjct: 20  KAIVAMSGGVDSSVAAALLHNLGYQVIGVTLQLYGTDGNANARKGACCAGQDIYDAKRVA 79

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +S+G  H +      +I    + ++ A        P   V     +       +   LG 
Sbjct: 80  ESVGFPHYI--LNYEEIFKKEVIEDFASTYMRGETPIPCVRCNQTVKFRDLLQVTKNLGA 137

Query: 129 TNIVIGVC----ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM-WLKKYETWKL 183
             +V G      E +         D  +     +    +  + +    +    K +  KL
Sbjct: 138 DVLVTGHYVRRLEKNGEVKLCRSIDKSKDQSYFLFATTQEQLKLLRFPLGGFYKSDIRKL 197

Query: 184 AQ 185
           A+
Sbjct: 198 AK 199


>gi|295096181|emb|CBK85271.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 370

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 53/192 (27%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +VE L     + +  E  C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYKVEGLFMKNWEEDDGEEYC--TAAADL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +             +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G            +                 L  E       P+  L
Sbjct: 115 FAAEDLGADYIATGHYVRRADVNGKSQLLRGLDGNKDQSYFLYTLSHEQIAQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K E  K+A+D+
Sbjct: 175 EKPEVRKIAEDL 186


>gi|148826939|ref|YP_001291692.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae PittGG]
 gi|189030632|sp|A5UEV3|THII_HAEIG RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|148718181|gb|ABQ99308.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae PittGG]
          Length = 485

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W+  
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWQRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + + V        L    V   + +        A R  I  
Sbjct: 232 SASHKVRFIAINFEGVVGEILEKVDNGQMGVVLKRMMVRAASKV--------AQRFNIEA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I     A+         V  PL+   K +   +A++IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDEAADAL---------VLRPLITHDKEQIIAMAKEIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|167574274|ref|ZP_02367148.1| hypothetical protein BoklC_30830 [Burkholderia oklahomensis C6786]
          Length = 198

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 57/213 (26%), Gaps = 33/213 (15%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           LL SGG DS     W          ++  YGQR                      +    
Sbjct: 5   LLLSGGMDSIAIAYWVRPA----VGITVAYGQRAAQAEV---------RAAAAVCEALNI 51

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           E H++   +      S     +A               + ++ L     +A  +    I 
Sbjct: 52  EHHVIDADL--STLGSGDMAGLAPSTLAPVSEWWPFRNQMLVTLAAMRAVALDVNRLLIG 109

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
               +  ++         + A+      G    + +  P + L   E  K         +
Sbjct: 110 SLRTDGIHADGKPEFIAAMSAVLQCQEGG----IALEAPAIKLSGAELIK------TSGV 159

Query: 193 VNLILEESHTCYLGKRDKRYEWGYGCNSCPACY 225
              +L  +H+C++            C  C  C 
Sbjct: 160 PIDLLAWAHSCHVANE--------ACGICRGCR 184


>gi|260790337|ref|XP_002590199.1| hypothetical protein BRAFLDRAFT_283497 [Branchiostoma floridae]
 gi|229275389|gb|EEN46210.1| hypothetical protein BRAFLDRAFT_283497 [Branchiostoma floridae]
          Length = 688

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 57/195 (29%), Gaps = 11/195 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        D+V  +  D G   K E +       ++   +   
Sbjct: 233 KVLVLVSGGVDSAVCAALLHKALDKDQVIAVHIDNGFMRKNESQMVYESLTRLGLDLKMV 292

Query: 68  KD----SLGEDHI-LPLAILGDISHSSLTKNVAMKIQDNNLP--NTFVPGRNIIFLVFAA 120
                   G+ H+ +  A        +   N     +D      +TF+   + +      
Sbjct: 293 NAAHQFYNGKTHVPINKADPKGKKRITEQLNRTTNPEDKRRIIGDTFMKVADEVISEMNL 352

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKY 178
                      +        S       D I+      NL         V  PL    K 
Sbjct: 353 NPEEVFLAQGTLRPDLIESASSLASKNADAIKTHHNDTNLVRELRDKGRVVEPLKDFHKD 412

Query: 179 ETWKLAQDIGGQDLV 193
           E   L +D+G    +
Sbjct: 413 EVRALGRDLGLPQDL 427


>gi|119512578|ref|ZP_01631655.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Nodularia spumigena CCY9414]
 gi|119462778|gb|EAW43738.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Nodularia spumigena CCY9414]
          Length = 539

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 55/186 (29%), Gaps = 11/186 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST          +++  +  D G   K+E E    + K   E     
Sbjct: 236 KRVLLALSGGVDSSTLAFLLYKAIGEQLTCVFIDQGFMRKLEPE---RLLKLFKEQFHIP 292

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            + +             ++      +   K +        V       L     LA    
Sbjct: 293 VEYVMARDRF-------LNMIEGITDPEEKRRRIGHEFIQVFEETSKRLGHFDYLAQGTL 345

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +++            +     I++      L  +    +  PL  L K E  K+ + I
Sbjct: 346 YPDVIESADTNVDPQTGERVAVKIKSHHNVGGLPKDLRFKLVEPLRKLFKDEVRKVGRSI 405

Query: 188 GGQDLV 193
           G  + +
Sbjct: 406 GLPEEI 411


>gi|329113810|ref|ZP_08242581.1| tRNA-specific 2-thiouridylase MnmA [Acetobacter pomorum DM001]
 gi|326696820|gb|EGE48490.1| tRNA-specific 2-thiouridylase MnmA [Acetobacter pomorum DM001]
          Length = 360

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 48/185 (25%), Gaps = 9/185 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DSS   +  L+    V   +           +   C  + I +       
Sbjct: 2   RILVAMSGGVDSSVVAARLLEEGHEVVGATLQLYDSRGAAKKGACCAGQDIRDARAVADL 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                +++           S+ +  A        P   V     +       LA  +G  
Sbjct: 62  LGFPHYVID---AERRFKDSVIERFADAYASGETPVPCVACNQGVKFTDLLGLAREIGAD 118

Query: 130 NI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL-KKYETWKL 183
            +     V  V   + +       +             +    +  PL  +  K    K 
Sbjct: 119 AMATGHYVRRVEGPEGAELHRPCDEDRDQSWFLFATTRDQLEFLRFPLGDMPDKAAVRKE 178

Query: 184 AQDIG 188
           A+  G
Sbjct: 179 AERFG 183


>gi|33239490|ref|NP_874432.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Prochlorococcus marinus subsp. marinus str. CCMP1375]
 gi|44887938|sp|Q7VEH5|GUAA_PROMA RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|33237015|gb|AAP99084.1| GMP synthase [Prochlorococcus marinus subsp. marinus str. CCMP1375]
          Length = 528

 Score = 54.5 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 50/191 (26%), Gaps = 19/191 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSST          +++  +  D G   K E E               
Sbjct: 224 KKRVLLALSGGVDSSTLAFLLKKAIGNQLTCMFIDQGFMRKGEPEF-------------- 269

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +   +   + +  +                +           R              L
Sbjct: 270 LMEFFDKKFHINVEYINARDRFLDKLQGVSDPEKKRKIIGTEFIRVFEEESLRLGPFDYL 329

Query: 127 GITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
               +   V E+  +       +     I++      L  +    +  PL  L K E  K
Sbjct: 330 AQGTLYPDVIESSGTNIDPKTGERIAVKIKSHHNVGGLPKDLQFKLVEPLRTLFKDEVRK 389

Query: 183 LAQDIGGQDLV 193
           + + +G  + +
Sbjct: 390 VGRSLGLPEEI 400


>gi|325970705|ref|YP_004246896.1| tRNA-specific 2-thiouridylase mnmA [Spirochaeta sp. Buddy]
 gi|324025943|gb|ADY12702.1| tRNA-specific 2-thiouridylase mnmA [Spirochaeta sp. Buddy]
          Length = 356

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 33/118 (27%), Gaps = 7/118 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-------VELECRLCVRKKIVE 62
             L+  SGG DSS        +   V  ++     +                   + I+ 
Sbjct: 2   KVLVGMSGGIDSSVAAYLLKQQGHEVMGVTMTIWNKRSHLTRPLNSTSCFAPDKTEDIIA 61

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           +    +    E  +L L+ L +    +  K   M  +  N             +V  A
Sbjct: 62  IKKICEKIGIEHQVLELSDLFEEIVLANFKTEYMDGRTPNPCVWCNSKIKFGAMVEYA 119


>gi|290475827|ref|YP_003468719.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Xenorhabdus bovienii SS-2004]
 gi|289175152|emb|CBJ81955.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Xenorhabdus bovienii SS-2004]
          Length = 367

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 50/188 (26%), Gaps = 9/188 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +  +V  L     + +  E  C         +   
Sbjct: 4   NSQKKVIVGMSGGVDSSVSAYLLQQQGYKVAGLFMKNWEEDDDEEYCSAAADL--ADAQA 61

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  E H +      +   +     +A            +  + I F  F    A  
Sbjct: 62  VCDKLGIELHTIN--FAAEYWDNVFEHFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAED 119

Query: 126 LGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           LG   I  G            +                 L  +       P+  L+K E 
Sbjct: 120 LGADYIATGHYVRRRDVDGISQLLRGLDGNKDQSYFLYTLSHQQIAKSLFPVGELEKPEV 179

Query: 181 WKLAQDIG 188
            +LA++IG
Sbjct: 180 RRLAEEIG 187


>gi|315634332|ref|ZP_07889619.1| thiamine biosynthesis protein ThiI [Aggregatibacter segnis ATCC
           33393]
 gi|315476922|gb|EFU67667.1| thiamine biosynthesis protein ThiI [Aggregatibacter segnis ATCC
           33393]
          Length = 482

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 57/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       L R  RV    F+ G            +  K +     W+  
Sbjct: 180 VLSLISGGFDSGVSSYMLLRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWQRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + +NV        L    V   + I        A R  I  
Sbjct: 232 GSSHKVRFVAINFEGVVGEILENVDNGQMGVVLKRMMVRAASKI--------AQRFDIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S          + +     +   + V V  PL+   K +   +A+ IG  
Sbjct: 284 IVTGEALGQVSS---------QTLTNLRLIDEAADVLVLRPLITHDKEQIIAMAKHIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|300864149|ref|ZP_07109043.1| GMP synthase [Oscillatoria sp. PCC 6506]
 gi|300337839|emb|CBN54189.1| GMP synthase [Oscillatoria sp. PCC 6506]
          Length = 537

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 54/186 (29%), Gaps = 11/186 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST           ++  +  D G   K E E    + K   E     
Sbjct: 234 KRVLLALSGGVDSSTLAFLLHKAIGAQLTCMFIDQGFMRKYEPE---RLVKLFHEQFHID 290

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +             ++  +   +  +K +        V       L     LA    
Sbjct: 291 VQYVNARDRF-------LAKIAGVTDPEVKRKHIGHEFIQVFEEESKRLGPFDYLAQGTL 343

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +++            +     I++      L  +    +  PL  L K E  KL + I
Sbjct: 344 YPDVIESADTNVDPKTGERVAVKIKSHHNVGGLPKDLRFKLIEPLRKLFKDEVRKLGRSI 403

Query: 188 GGQDLV 193
           G  + +
Sbjct: 404 GLPEEI 409


>gi|304317430|ref|YP_003852575.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacterium thermosaccharolyticum DSM 571]
 gi|302778932|gb|ADL69491.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacterium thermosaccharolyticum DSM 571]
          Length = 372

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 51/192 (26%), Gaps = 12/192 (6%)

Query: 4   IIKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           +I+       ++  SGG DSS       ++   V  +             C     +   
Sbjct: 1   MIESNKNIKVVVGMSGGVDSSVSALLLKEQGYDVVGIFMKNWDEEDDSGYC--TAAEDYE 58

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +++          + +            + K    + +    PN  V     I       
Sbjct: 59  DVVRVCDKIGIPYYSIN---FTQEYWDRVFKYFLDEYRSGRTPNPDVMCNKEIKFKAFLD 115

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRH-----DTIRAIETAINLGMESHVTVHTPLMWLK 176
            + ++G   I  G            R                 LG +       P+  L 
Sbjct: 116 FSLKIGADYIATGHYARIEYSNGKYRMLKGVDKNKDQTYFLCELGQKQLSKTIFPIGHLN 175

Query: 177 KYETWKLAQDIG 188
           K+E  ++A+  G
Sbjct: 176 KFEVREIARKAG 187


>gi|256383871|gb|ACU78441.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256384702|gb|ACU79271.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455514|gb|ADH21749.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 375

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 52/195 (26%), Gaps = 17/195 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-----VELECRLCVR---K 58
                ++  SGG DSS      L +   VE L                +     +    +
Sbjct: 1   MKQKVVVGLSGGVDSSVACYLLLQQGYEVEGLFMRNWDSATNNDILGNININNDICPQEQ 60

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
             ++          + H +    + +         +    +        +  + I F  F
Sbjct: 61  DYLDAKAVADKLNIKLHRVD--FIKEYWDYVFLYFIEEYKKARTPNPDILCNKYIKFDKF 118

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI-------NLGMESHVTVHTP 171
                 +L    I +G            +++  +A +T          L          P
Sbjct: 119 LNYAINQLNADYIAMGHYAKVEFNKTTKQYELFKASDTNKDQTYFLSQLNQNQLSKTLFP 178

Query: 172 LMWLKKYETWKLAQD 186
           L  L K +  K+A +
Sbjct: 179 LANLTKEQVRKIALE 193


>gi|261418420|ref|YP_003252102.1| tRNA-specific 2-thiouridylase MnmA [Geobacillus sp. Y412MC61]
 gi|319767620|ref|YP_004133121.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Geobacillus sp. Y412MC52]
 gi|261374877|gb|ACX77620.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Geobacillus sp. Y412MC61]
 gi|317112486|gb|ADU94978.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Geobacillus sp. Y412MC52]
          Length = 371

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 53/193 (27%), Gaps = 11/193 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN    +    ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MNKAPHET-RVVVGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            +      + +    PN  V     I      
Sbjct: 58  EDVVRVCNQIGIPYYAVN---FEKQYWDKVFTYFLNEYKAGRTPNPDVMCNKEIKFKAFL 114

Query: 121 TLAYRLGITNIVIGVCET---DYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWL 175
             A  +G   I  G           Y   R       +T     LG      V  P+  L
Sbjct: 115 EHAMSIGADYIATGHYARVEFRDGEYKMLRGADPNKDQTYFLNQLGQAQLSKVMFPIGHL 174

Query: 176 KKYETWKLAQDIG 188
           +K +  ++A++ G
Sbjct: 175 QKADVRRIAKEAG 187


>gi|126462045|ref|YP_001043159.1| tRNA-specific 2-thiouridylase MnmA [Rhodobacter sphaeroides ATCC
           17029]
 gi|205816923|sp|A3PJ71|MNMA_RHOS1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|126103709|gb|ABN76387.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhodobacter sphaeroides ATCC 17029]
          Length = 379

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 47/188 (25%), Gaps = 10/188 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +        V  ++   Y     +  +   C  + I +     +
Sbjct: 19  RVVVAMSGGVDSSVVAAELAAEGYDVVGVTLQLYDHGAALAKKGACCAGRDIHDARRVAE 78

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL-- 126
                 ++L           ++    A        P   +     +        A  L  
Sbjct: 79  TMGFPHYVLDYEN---TFREAVIDEFADAYLAGATPVPCIRCNERVKFKDLLQTAKDLDA 135

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL----KKYETWK 182
                   +        P+       A + +  L   +   +      L     K ET  
Sbjct: 136 DCMATGHYIQRKMGPAGPELHCAADAARDQSYFLFSTTPEQLAFLRFPLGHLASKAETRA 195

Query: 183 LAQDIGGQ 190
           LA   G  
Sbjct: 196 LAARHGLP 203


>gi|146277942|ref|YP_001168101.1| tRNA-specific 2-thiouridylase MnmA [Rhodobacter sphaeroides ATCC
           17025]
 gi|205817026|sp|A4WTT2|MNMA_RHOS5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|145556183|gb|ABP70796.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhodobacter sphaeroides ATCC 17025]
          Length = 378

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 48/188 (25%), Gaps = 10/188 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +        V  ++   Y     +  +   C  + I +     +
Sbjct: 19  RVVVAMSGGVDSSVVAAELAADGYDVVGVTLQLYDHGAALAKKGACCAGRDIHDARRVAE 78

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL-- 126
                 ++L           ++    A        P   +     +        A  L  
Sbjct: 79  TMGFPHYVLDYEN---TFREAVIDEFADAYLAGATPVPCIRCNERVKFKDLLQTAKDLDA 135

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL----KKYETWK 182
                   +     +  P+       A + +  L   +   +      L     K ET  
Sbjct: 136 DCMATGHYIQRKMGAAGPELHCAADAARDQSYFLFSTTREQLDYLRFPLGHLASKAETRA 195

Query: 183 LAQDIGGQ 190
           LA   G  
Sbjct: 196 LAARHGLP 203


>gi|319779509|ref|YP_004130422.1| Argininosuccinate synthase [Taylorella equigenitalis MCE9]
 gi|317109533|gb|ADU92279.1| Argininosuccinate synthase [Taylorella equigenitalis MCE9]
          Length = 406

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 50/157 (31%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +    +L +SGG D+S  L W  D +   V T + D GQ  ++E        K  ++ 
Sbjct: 1   MSEYKKVVLAYSGGLDTSVILKWLQDTYNCEVITFTADIGQGEELEPARA-KALKFGIKP 59

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + D L E+ +            + T      +   ++    +  R I         A
Sbjct: 60  EHIFIDDLKEEFVKDFVF---PMFRANTIYEGEYLLGTSIARPLIAKRQIEIAKQVGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         +   Y       + A     +L
Sbjct: 117 VSHGATGKGNDQVRFELGYYALNPDIKVIAPWREWDL 153


>gi|291514578|emb|CBK63788.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Alistipes shahii WAL 8301]
          Length = 399

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 47/189 (24%), Gaps = 13/189 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE----------CRLCVRKK 59
             ++  SGG DSS       ++   V  L           LE              V +K
Sbjct: 3   RVVIGLSGGVDSSVAAWLLKEQGHEVVGLFMINWHDTTGTLEGDCPWHDDRVFAELVARK 62

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +   +     S      + +  +        T N  +        + F+     +   + 
Sbjct: 63  LDIELHVVDLSADYRTRV-VDYMFAEYERGRTPNPDVLCNREIKFDVFLREALKLGADYV 121

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           AT  Y                                   L  E       P+  L K E
Sbjct: 122 ATGHYCRKAEE--TLPDGRTIHKLLAGSDPNKDQSYFLCQLSQEQLSRALFPVGGLLKPE 179

Query: 180 TWKLAQDIG 188
             ++A++ G
Sbjct: 180 VRRIAEEQG 188


>gi|85708990|ref|ZP_01040056.1| argininosuccinate synthase [Erythrobacter sp. NAP1]
 gi|85690524|gb|EAQ30527.1| argininosuccinate synthase [Erythrobacter sp. NAP1]
          Length = 407

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 55/178 (30%), Gaps = 7/178 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S    W  ++R   V T + D GQ  ++E          I + 
Sbjct: 1   MSDIKRVVLAYSGGLDTSVIAKWLSVERGLEVVTFTADLGQGEEIEPAREKARAMGIPD- 59

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + + L E+ +            +  +     +   ++    +  R +         A
Sbjct: 60  EHIFIEDLREEFVRDFVF---PMMRANARYEGDYLLGTSIARPLISKRLVEIAHETGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYE 179
              G T         + S Y       + A     +L   + +        + + K +
Sbjct: 117 IAHGATGKGNDQVRFELSAYALDPSIKVIAPWREWDLTSRTALIAWAEAHQIAVPKDK 174


>gi|293400445|ref|ZP_06644590.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305471|gb|EFE46715.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 391

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 52/195 (26%), Gaps = 12/195 (6%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-----QRNKVELECRLCVR- 57
           ++K A   LL  SGG DS+       ++   V                      +  V  
Sbjct: 2   VMKMAQKVLLGLSGGVDSAVAAYILKEQGYDVTCAFMRNWDSFANNDIMGNPTIQDDVCP 61

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           ++   L  K         +L +  + +   +  T  +    +        +     I   
Sbjct: 62  QEQDYLDAKAVADKLGLPLLRVDFVKEYWDNVFTYFLDEYRKGRTPNPDILC-NKYIKFD 120

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRH-----DTIRAIETAINLGMESHVTVHTPL 172
                A +LG   +  G            R                 +  ++      P+
Sbjct: 121 AFMKYARKLGFDILATGHYAQVEHTPLYSRMLRGADSNKDQTYFLCQVSQDALAHALFPI 180

Query: 173 MWLKKYETWKLAQDI 187
             L K E  ++AQ +
Sbjct: 181 GNLNKAEVREIAQKL 195


>gi|262306025|gb|ACY45605.1| gln amidotransferase [Cryptocellus centralis]
          Length = 196

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 26/65 (40%), Gaps = 2/65 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +   L+L SGG DS+ C +      + D+V  +  D G   K E        +++   M 
Sbjct: 43  SNKVLMLLSGGVDSTVCAALLHKALKEDQVIAVHIDNGFMRKNESLQVEQSLRRLGVKMR 102

Query: 66  KWKDS 70
               S
Sbjct: 103 VINAS 107


>gi|237750858|ref|ZP_04581338.1| tRNA methyltransferase [Helicobacter bilis ATCC 43879]
 gi|229373303|gb|EEO23694.1| tRNA methyltransferase [Helicobacter bilis ATCC 43879]
          Length = 354

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 37/105 (35%), Gaps = 4/105 (3%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL-ECRLCVRKKIVE 62
           + KK  SA+ LFSGG DS   +    ++  +V  L+F+ G  +  +  E      K++  
Sbjct: 1   MTKKQISAVALFSGGLDSMISMQLLHEQGIKVYALNFNIGFGSNKDKSEYFYNAAKQVGA 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF 107
            + +              +           N  +    N   + F
Sbjct: 61  ELIQIN---IAKQFFDNILFKPQYGYGKYFNPCIDCHANMFSHAF 102


>gi|222099726|ref|YP_002534294.1| GMP synthase [Thermotoga neapolitana DSM 4359]
 gi|221572116|gb|ACM22928.1| GMP synthase [Thermotoga neapolitana DSM 4359]
          Length = 503

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 58/190 (30%), Gaps = 23/190 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              A+L  SGG DSS             +  +  D+G   K E E    V K+       
Sbjct: 207 NKKAILALSGGVDSSVAAVLVHRAIGKNLVCVFVDHGLLRKNEREEVERVFKE------- 259

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                            ++      K    K++    P          F+      A + 
Sbjct: 260 -------------HFDMNLVVVDARKRFLEKLRGVTDPEKKRKIIGEEFIRVFEEEAKKH 306

Query: 127 GITNIVIGVCETDY--SGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            +  +V G   +D   S         I++      L  + ++ +  PL  L K E  K+ 
Sbjct: 307 DVEFLVQGTIYSDVIESAASGKTTAKIKSHHNVGGLPEKMNLKLVEPLRDLFKDEVRKVG 366

Query: 185 QDIGGQDLVN 194
           + +G  D + 
Sbjct: 367 KYLGIPDRII 376


>gi|188997212|ref|YP_001931463.1| thiamine biosynthesis protein [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932279|gb|ACD66909.1| thiamine biosynthesis protein [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 355

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 26/79 (32%), Gaps = 4/79 (5%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ----RNKVELECRLCVRKKIVE 62
              A+ L+SGG DS+  +    ++   V  L F  G       +   E +      +  
Sbjct: 1  MKRKAVALYSGGLDSTLAIKLVQNQGIDVLALHFYTGFCITETKRRRGEKKEDGSHYMNP 60

Query: 63 LMPKWKDSLGEDHILPLAI 81
           +           I+ ++ 
Sbjct: 61 ALKYAAKYGFPLEIVDISD 79


>gi|148270235|ref|YP_001244695.1| GMP synthase [Thermotoga petrophila RKU-1]
 gi|226739760|sp|A5ILP6|GUAA_THEP1 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|147735779|gb|ABQ47119.1| GMP synthase (glutamine-hydrolyzing) [Thermotoga petrophila RKU-1]
          Length = 501

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 58/190 (30%), Gaps = 23/190 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              A+L  SGG DSS             +  +  D+G   K E E    V K+       
Sbjct: 205 NKKAILALSGGVDSSVAAVLVHRAIGKNLVCVFVDHGLLRKNEREEVERVFKE------- 257

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                            ++      K    K++    P          F+      A + 
Sbjct: 258 -------------HFDMNLVVVDARKRFLEKLRGVTDPEKKRKIIGEEFIRVFEEEAKKH 304

Query: 127 GITNIVIGVCETDY--SGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            +  +V G   +D   S         I++      L  + ++ +  PL  L K E  K+ 
Sbjct: 305 DVEFLVQGTIYSDVIESAASGKTTAKIKSHHNVGGLPEKMNLKLVEPLRDLFKDEVRKVG 364

Query: 185 QDIGGQDLVN 194
           + +G  D + 
Sbjct: 365 KYLGIPDRII 374


>gi|15644564|ref|NP_229617.1| GMP synthase [Thermotoga maritima MSB8]
 gi|170288796|ref|YP_001739034.1| GMP synthase, large subunit [Thermotoga sp. RQ2]
 gi|281412430|ref|YP_003346509.1| GMP synthase, large subunit [Thermotoga naphthophila RKU-10]
 gi|13627216|sp|Q9X2E0|GUAA_THEMA RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226739761|sp|B1LAK3|GUAA_THESQ RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|4982402|gb|AAD36883.1|AE001819_6 GMP synthase [Thermotoga maritima MSB8]
 gi|170176299|gb|ACB09351.1| GMP synthase, large subunit [Thermotoga sp. RQ2]
 gi|281373533|gb|ADA67095.1| GMP synthase, large subunit [Thermotoga naphthophila RKU-10]
          Length = 501

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 58/190 (30%), Gaps = 23/190 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              A+L  SGG DSS             +  +  D+G   K E E    V K+       
Sbjct: 205 NKKAILALSGGVDSSVAAVLVHRAIGKNLVCVFVDHGLLRKNEREEVERVFKE------- 257

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                            ++      K    K++    P          F+      A + 
Sbjct: 258 -------------HFDMNLVVVDARKRFLEKLRGVTDPEKKRKIIGEEFIRVFEEEAKKH 304

Query: 127 GITNIVIGVCETDY--SGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            +  +V G   +D   S         I++      L  + ++ +  PL  L K E  K+ 
Sbjct: 305 DVEFLVQGTIYSDVIESAASGKTTAKIKSHHNVGGLPEKMNLKLVEPLRDLFKDEVRKVG 364

Query: 185 QDIGGQDLVN 194
           + +G  D + 
Sbjct: 365 KYLGIPDRII 374


>gi|198274021|ref|ZP_03206553.1| hypothetical protein BACPLE_00158 [Bacteroides plebeius DSM 17135]
 gi|198273099|gb|EDY97368.1| hypothetical protein BACPLE_00158 [Bacteroides plebeius DSM 17135]
          Length = 375

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/194 (10%), Positives = 43/194 (22%), Gaps = 17/194 (8%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL---------SFDYGQRNKVELECRL 54
           + ++    L+  SGG DSS       ++   V  +          F  G     E+    
Sbjct: 1   MKEREKRVLVGMSGGIDSSAACIMLQEQGYEVVGVTMRTWDVASHFTPGNDQPNEVIEAQ 60

Query: 55  CVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            +  ++               ++    + +                  + N     R + 
Sbjct: 61  ELAARLGIEHHVADVRTEFRQVIVQYFIDEYMRGRTPNP-------CVMCNPLFKERILC 113

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
                   A+        +                  ++      L  E    +  PL  
Sbjct: 114 EWADKCNCAWIATGHYCQLKDLNGYRYILTGDDPLKDQSYF-LWKLPQEILKRMMFPLGG 172

Query: 175 LKKYETWKLAQDIG 188
           + K          G
Sbjct: 173 MTKASVRDYLASKG 186


>gi|13541621|ref|NP_111309.1| thiamine biosynthesis protein ThiI [Thermoplasma volcanium GSS1]
 gi|20140709|sp|Q97AK6|THII_THEVO RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|14325020|dbj|BAB59946.1| hypohtetical protein [Thermoplasma volcanium GSS1]
          Length = 476

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 62/186 (33%), Gaps = 25/186 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + + SGG DS       + R    +   F     + ++ +  L + KK+VE    ++D
Sbjct: 170 KLISMVSGGIDSPVATWLMMKRGSPCDI--FFCSLADPIDTQAFLEIAKKLVERWSPYRD 227

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                              +  +++   +      N        +    A  LA +    
Sbjct: 228 GNVFI--------------ADCRDLIRDMVIEKKTNFNNVTFKKVLYRLAERLAEKYRYL 273

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      S          +  E  +++    +  ++ PL+ L K E   +A+DIG 
Sbjct: 274 GIVTGESLGQVSS---------QTAENLLSIEHGINFPIYRPLIGLDKDEITAIARDIGT 324

Query: 190 QDLVNL 195
               N+
Sbjct: 325 FPEKNV 330


>gi|260779096|ref|ZP_05887988.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605260|gb|EEX31555.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio coralliilyticus ATCC BAA-450]
          Length = 373

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 49/188 (26%), Gaps = 11/188 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +  +VE L     + +  E  C     + + +   
Sbjct: 8   NSKKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYC--TAAEDLADAQA 65

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    H +      +   +     +A            +  + I F  F       
Sbjct: 66  VCDKLGIHLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEFADEV 123

Query: 126 LGITNIVIGVCETDYSGYPDCRHDT-------IRAIETAINLGMESHVTVHTPLMWLKKY 178
           L    I +G            +                   L  +       P+  L+K 
Sbjct: 124 LDADYIAMGHYVRRTFPDNGEKPQMLRGLDGNKDQSYFLYTLSSDQIARSLFPVGELEKP 183

Query: 179 ETWKLAQD 186
           E  ++A++
Sbjct: 184 EVRRIAEE 191


>gi|254499186|ref|ZP_05111866.1| tRNA (5 methylaminomethyl-2-thiouridylate) methyltransferase
           [Legionella drancourtii LLAP12]
 gi|254351576|gb|EET10431.1| tRNA (5 methylaminomethyl-2-thiouridylate) methyltransferase
           [Legionella drancourtii LLAP12]
          Length = 361

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 49/187 (26%), Gaps = 10/187 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS       ++   VE L     +++  +  C         +    
Sbjct: 1   MKAKIIVGMSGGVDSSVAAWLLKEQGYEVEGLFMKNWEQDDTDGFCPAAQDL--ADAQAV 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   H +      +     +  +   + +    PN  V     I        A  L
Sbjct: 59  CNQLNIPLHSVN---FSEQYWERVFMHFLSEYEKGRTPNPDVLCNKEIKFNAFLNYALDL 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-----VHTPLMWLKKYETW 181
           G   I  G    +            +  +      + +           P+    K E  
Sbjct: 116 GADYIATGHYAKNKISNNIGHLLKAKDRDKDQTYFLHAVDPAALAKTLFPIGDYTKPEIR 175

Query: 182 KLAQDIG 188
           + A+ +G
Sbjct: 176 EFAKQLG 182


>gi|56421098|ref|YP_148416.1| tRNA-specific 2-thiouridylase MnmA [Geobacillus kaustophilus
           HTA426]
 gi|81557817|sp|Q5KWT8|MNMA2_GEOKA RecName: Full=tRNA-specific 2-thiouridylase mnmA 2
 gi|56380940|dbj|BAD76848.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Geobacillus kaustophilus HTA426]
          Length = 371

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 53/193 (27%), Gaps = 11/193 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN    +    ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MNKAPHET-RVVVGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            +      + +    PN  V     I      
Sbjct: 58  EDVVRVCNQIGIPYYAVN---FEKQYWDKVFTYFLNEYKAGRTPNPDVMCNKEIKFKAFL 114

Query: 121 TLAYRLGITNIVIGVCET---DYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWL 175
             A  +G   I  G           Y   R       +T     LG      V  P+  L
Sbjct: 115 EHAMSIGADYIATGHYARVEFRDGEYKMLRGADPNKDQTYFLNQLGQAQLSKVMFPIGHL 174

Query: 176 KKYETWKLAQDIG 188
           +K +  ++A++ G
Sbjct: 175 QKADVRRIAKEAG 187


>gi|229816665|ref|ZP_04446954.1| hypothetical protein COLINT_03714 [Collinsella intestinalis DSM
           13280]
 gi|229807793|gb|EEP43606.1| hypothetical protein COLINT_03714 [Collinsella intestinalis DSM
           13280]
          Length = 327

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 53/186 (28%), Gaps = 24/186 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             ALL  SGG DSS   +  +     +   +  ++G   K E E      + +     + 
Sbjct: 37  KKALLALSGGVDSSVVAALLIKAIGKQFICVHVNHGLMRKGESE------QVVDVFRNQL 90

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +L     +    L  +   +  +     I    +       R +   V          
Sbjct: 91  DANLVYVDAID-RFLSLLDGVAEPEAKRKIIGAEFIRVFEEEARKVGDEVSFLA------ 143

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                                D ++A      L  +    +  P+  L K E   + +++
Sbjct: 144 ----------QGTIYPDILESDGVKAHHNVGGLPDDLQFELCEPVRLLYKDEVRVVGREL 193

Query: 188 GGQDLV 193
           G  + +
Sbjct: 194 GLPESM 199


>gi|168182080|ref|ZP_02616744.1| GMP synthase (glutamine-hydrolyzing) [Clostridium botulinum Bf]
 gi|237796735|ref|YP_002864287.1| GMP synthase [Clostridium botulinum Ba4 str. 657]
 gi|259647673|sp|C3KUC5|GUAA_CLOB6 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|182674773|gb|EDT86734.1| GMP synthase (glutamine-hydrolyzing) [Clostridium botulinum Bf]
 gi|229263393|gb|ACQ54426.1| GMP synthase [Clostridium botulinum Ba4 str. 657]
          Length = 510

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 58/188 (30%), Gaps = 22/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS            ++  +  D+G   K E +    + K   ++   
Sbjct: 215 NKKVICALSGGVDSSVAAVIVHKAIGKQLTCIFVDHGLLRKDEGDQVEKIFKDQFDMNLI 274

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             ++           LG +   S  +     I +               +      A +L
Sbjct: 275 RVNAQDR-------FLGKLKGVSDPERKRKIIGEEF-------------IRVFEEEAKKL 314

Query: 127 G-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           G I+ +V G    D          TI++      L  +    +  PL  L K E   + +
Sbjct: 315 GDISFLVQGTIYPDIVESGTNTSATIKSHHNVGGLPEDMEFKLIEPLRELFKDEVRAVGE 374

Query: 186 DIGGQDLV 193
           ++G    +
Sbjct: 375 ELGIPHKL 382


>gi|86606329|ref|YP_475092.1| GMP synthase [Synechococcus sp. JA-3-3Ab]
 gi|86554871|gb|ABC99829.1| GMP synthase, glutamine-hydrolyzing [Synechococcus sp. JA-3-3Ab]
          Length = 538

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 54/190 (28%), Gaps = 19/190 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST          D++  +  D G   K E +  L + +         
Sbjct: 234 KRVLLALSGGVDSSTLAFLLHKAIGDQLTCVFIDQGFMRKDEPQRLLRLFQ--------- 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                E   +P+  +                ++          R              L 
Sbjct: 285 -----EQFHIPVHYVDGQERFLRQLQGVTDPEEKRKRIGAEFIRVFEEESQRLGPFEYLA 339

Query: 128 ITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              +   V E+  +       +     I++      L       +  PL  L K E  +L
Sbjct: 340 QGTLYPDVIESANTNVDPVTGERIAVKIKSHHNVGGLPENLRFKLVEPLRKLFKDEVRQL 399

Query: 184 AQDIGGQDLV 193
           A+ +G  + +
Sbjct: 400 ARSLGLPEEI 409


>gi|254449359|ref|ZP_05062802.1| thiamine biosynthesis/tRNA modification protein ThiI [gamma
           proteobacterium HTCC5015]
 gi|198261026|gb|EDY85328.1| thiamine biosynthesis/tRNA modification protein ThiI [gamma
           proteobacterium HTCC5015]
          Length = 481

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 60/184 (32%), Gaps = 27/184 (14%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-RNKVELECRLCVRKKIVELMPKWKD 69
           A+ L SGG DS+      + R  +   L F+ G   ++V           + E+      
Sbjct: 181 AMSLMSGGFDSAVASYLTMSRGLKTHFLFFNLGGSDHEVG----------VKEVAYYLWQ 230

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G  H +          S   + V  +I D    +        +FL  A+ +A    + 
Sbjct: 231 RYGSSHKVKFI-------SVDFEPVVAEILDKVKNSQMGVVLKRMFLRAASDIAKVHKVE 283

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      S                  +   +   V  PL+   K +  ++A+ IG 
Sbjct: 284 ALVTGEAIAQVSSQTLP---------NLAVIDEVTEHLVLRPLITTHKKDIIRIARQIGT 334

Query: 190 QDLV 193
           ++  
Sbjct: 335 EEFS 338


>gi|309973119|gb|ADO96320.1| Thiamine biosynthesis protein ThiI [Haemophilus influenzae R2846]
          Length = 485

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W+  
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWQRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + + V        L    V   + +        A R  I  
Sbjct: 232 SASHKVRFIAINFEGVVGEILEKVDNGQMGVVLKRMMVRAASKV--------AQRFNIEA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I     A+         V  PL+   K +   +A++IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDEAADAL---------VLRPLITHDKEQIIAMAKEIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|297529272|ref|YP_003670547.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Geobacillus sp. C56-T3]
 gi|297252524|gb|ADI25970.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Geobacillus sp. C56-T3]
          Length = 371

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 53/193 (27%), Gaps = 11/193 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN    +    ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MNKAPHET-RVVVGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            +      + +    PN  V     I      
Sbjct: 58  EDVVRVCNQIGIPYYAVN---FEKQYWDKVFTYFLNEYKAGRTPNPDVMCNKEIKFKAFL 114

Query: 121 TLAYRLGITNIVIGVCET---DYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWL 175
             A  +G   I  G           Y   R       +T     LG      V  P+  L
Sbjct: 115 EHAMSIGADYIATGHYARVEFRDGEYKMLRGADPNKDQTYFLNQLGQAQLSKVMFPIGHL 174

Query: 176 KKYETWKLAQDIG 188
           +K +  ++A++ G
Sbjct: 175 QKADVRRIAKEAG 187


>gi|293374251|ref|ZP_06620579.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Turicibacter sanguinis PC909]
 gi|292647084|gb|EFF65066.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Turicibacter sanguinis PC909]
          Length = 377

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/192 (11%), Positives = 43/192 (22%), Gaps = 11/192 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-----VELECRLCVR-KK 59
            K    ++  SGG DSS       ++   VE +                      V  ++
Sbjct: 4   NKGKKVIVGMSGGVDSSVAAYLLKEQGYEVEGVFMRNWDSAANADVLGNPTLNDEVCPQE 63

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +     K         +  +  + +         +             +     +     
Sbjct: 64  VDYNDAKTVADQLGIKLHRVDFVQEYWDRVFMYFLDEYRAGRTPNPDIMC-NKEVKFKAF 122

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCR----HDTIRAIETAINLGMESHVTVHTPLMWL 175
              A  LG   I +G                  +          L          P+  L
Sbjct: 123 LDYAMNLGCDYIAMGHYARVSHEGEVQMLRGLDNNKDQTYFLSQLTQAQLSKTLFPVGEL 182

Query: 176 KKYETWKLAQDI 187
           +K E   +A  +
Sbjct: 183 QKSEVRAIAAKL 194


>gi|262306037|gb|ACY45611.1| gln amidotransferase [Eumesocampa frigilis]
          Length = 196

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +    LLL SGG DS+ C +      + D+V  +  D G   K E        +K+   +
Sbjct: 42  QNNKVLLLVSGGVDSTVCAALLNKALKEDQVIAVHIDNGFMRKNESIKVEQSLRKLGLRL 101

Query: 65  PKWKDS 70
                S
Sbjct: 102 RVVNAS 107


>gi|117924260|ref|YP_864877.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Magnetococcus sp. MC-1]
 gi|205816907|sp|A0L678|MNMA_MAGSM RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|117608016|gb|ABK43471.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Magnetococcus sp. MC-1]
          Length = 358

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 52/192 (27%), Gaps = 11/192 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL- 63
           + +     +  SGG DSS   +  +++   V  L+      +             + +L 
Sbjct: 1   MTQPQRVAVAMSGGVDSSATAALLVEQGYEVIGLTMQLW-DHSSPKVAGSRSCCALDDLY 59

Query: 64  -MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
              +   +LG  + +           ++  +          PN  V    I+        
Sbjct: 60  DARQVAQTLGIPYYVV--NYEADFRQAVVDDFIQTYAAGQTPNPCVRCNQILKFDLLLKK 117

Query: 123 AYRLGITNIVIGVC------ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
           A  LG   +  G                                 M     V  PL  + 
Sbjct: 118 ALALGADFLATGHYAIRREDAQGVPQLWQGSDPAKDQSYFLFTTTMAQLAHVRFPLGEMD 177

Query: 177 KYETWKLAQDIG 188
           K +T +LAQ  G
Sbjct: 178 KQQTRQLAQRFG 189


>gi|313887530|ref|ZP_07821213.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312846408|gb|EFR33786.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 353

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 51/188 (27%), Gaps = 12/188 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +++    +L  SGG DSS       +    V  +      RN  E +     R+  ++++
Sbjct: 1   MQEKKKVILGMSGGVDSSVSAILLKEAGYDVTAVFM----RNWAEDDGMCTAREDYIDVV 56

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                   +   +            +      + +    PN  V     I        A 
Sbjct: 57  SVCSQLGIKYFTVN---FEKEYRDRVFSYFLSEYKKGRTPNPDVMCNTEIKFKAFLDYAM 113

Query: 125 RLGITNIVIGVCET--DYSGYPDCRHDTIRAIETAINLGMESHVTVH---TPLMWLKKYE 179
                 I +G         G            + +  L       +     P+  L K E
Sbjct: 114 DFDADYIAMGHYARTKKVHGKTYLLKGLDNNKDQSYFLSRVKSEALEKTLFPVGDLTKDE 173

Query: 180 TWKLAQDI 187
             ++A+  
Sbjct: 174 VRRIAEKY 181


>gi|254510076|ref|ZP_05122143.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhodobacteraceae bacterium KLH11]
 gi|221533787|gb|EEE36775.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhodobacteraceae bacterium KLH11]
          Length = 381

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/184 (10%), Positives = 47/184 (25%), Gaps = 6/184 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   ++  D+   V  ++   Y     +  +   C    I +     +
Sbjct: 22  RVVVAMSGGVDSSVVAAYLADQGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDARRVAE 81

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +     ++L    +   +      +  +                   L+  A        
Sbjct: 82  ERGFPHYVLDYENIFKDAVIDEFADSYLAGATPVPCIRCNERVKFKDLLETARDLEA-DC 140

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL----KKYETWKLA 184
                 +         +         + +  L   +   +      L     K  T ++A
Sbjct: 141 MATGHYIQRKMGPNGSELHSAEDANRDQSYFLFSTTPEQLDFLRFPLGHLPSKDATREMA 200

Query: 185 QDIG 188
              G
Sbjct: 201 AQYG 204


>gi|145636148|ref|ZP_01791818.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae PittHH]
 gi|145270670|gb|EDK10603.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae PittHH]
          Length = 485

 Score = 54.2 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W+  
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWQRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + + V        L    V   + +        A R  I  
Sbjct: 232 SASHKVRFIAINFEGVVGEILEKVDNGQMGVVLKRMMVRAASKV--------AQRFNIEA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I     A+         V  PL+   K +   +A++IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDEAADAL---------VLRPLITHDKEQIIAMAKEIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|78044956|ref|YP_359914.1| GMP synthase [Carboxydothermus hydrogenoformans Z-2901]
 gi|91206799|sp|Q3AD70|GUAA_CARHZ RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|77997071|gb|ABB15970.1| GMP synthase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 509

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 56/188 (29%), Gaps = 22/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS           D +  +  D+G   K E      V +   E    
Sbjct: 214 EEKVVCALSGGVDSSVAAVLVHKAIGDNLTCIFVDHGLLRKGE---AEEVVRTFKEQFQ- 269

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                            ++      +    K++    P          F+      A +L
Sbjct: 270 ----------------MNLVFVDAKEQFLAKLKGVRDPEQKRKIIGHEFIRVFEEEAAKL 313

Query: 127 G-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           G I  +V G    D          TI++      L  +    +  PL WL K E  +L  
Sbjct: 314 GDIRFLVQGTLYPDVVESGTATAATIKSHHNVGGLPEDMKFQLIEPLKWLFKDEVRELGL 373

Query: 186 DIGGQDLV 193
           ++G  + +
Sbjct: 374 ELGLPESI 381


>gi|168186048|ref|ZP_02620683.1| GMP synthase [Clostridium botulinum C str. Eklund]
 gi|169296037|gb|EDS78170.1| GMP synthase [Clostridium botulinum C str. Eklund]
          Length = 512

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 61/187 (32%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS            ++  +  D+G   K E +    + KK  + M   
Sbjct: 218 KKVLCALSGGVDSSVAAVLVHKAIGKQLTCVFVDHGLLRKDEGDQVETIFKKQFD-MNLI 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           + + GE        LG +   S  +     I +               +      A +LG
Sbjct: 277 RVNAGE------RFLGKLKGVSDPEKKRKIIGEEF-------------IRVFEEEANKLG 317

Query: 128 -ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  +V G    D          TI++      L  +   ++  PL  L K E   + ++
Sbjct: 318 QIDFLVQGTIYPDVVESGTNTSATIKSHHNVGGLPEDMQFSLIEPLRELFKDEVRAVGEE 377

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 378 LGIPHKL 384


>gi|57234425|ref|YP_181511.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Dehalococcoides ethenogenes 195]
 gi|123618735|sp|Q3Z8D8|MNMA_DEHE1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|57224873|gb|AAW39930.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Dehalococcoides ethenogenes 195]
          Length = 357

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 53/192 (27%), Gaps = 13/192 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MND    +   ++  SGG DSS      L++   V  +S     ++  E        K I
Sbjct: 1   MNDT---SELIMVAMSGGVDSSVAAMLLLEQGYDVAGVSLQL--KSNNEPYGNGYNLKLI 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                         +++ L+ +      +   +   +      PN  +     + +    
Sbjct: 56  NRAREVAAALGIPHYVVDLSDIFSQRVIA---DFCQQYSQGRTPNPCIRCNYYVKIGALL 112

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
                     +  G      S            +          L  ES   +  PL   
Sbjct: 113 EKIPDFNAGYLATGHYARVLSDENGTHLLKGADEKKDQSYFLYTLPPESLSRLIFPLGKR 172

Query: 176 KKYETWKLAQDI 187
            K +  +LA  +
Sbjct: 173 YKKDIIRLADKM 184


>gi|83859630|ref|ZP_00953150.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Oceanicaulis alexandrii HTCC2633]
 gi|83851989|gb|EAP89843.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Oceanicaulis alexandrii HTCC2633]
          Length = 433

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 51/185 (27%), Gaps = 9/185 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS   +       +V  ++   Y     V  +   C  + I +     +
Sbjct: 76  RVVAAMSGGVDSSVVAAVLHRAGYQVVGMTLQLYDHGEAVHRKGACCAGQDIHDARRVAE 135

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L           ++ ++ A        P   V     +        + +LG 
Sbjct: 136 AMGFAHYVLD---YETRFREAVIEDFADTYLAGFTPIPCVRCNQSVKFADLLATSKQLGA 192

Query: 129 TNIV-----IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +V           +                       E    +  PL  L K +T +L
Sbjct: 193 DCLVTGHYIQRTMSGNRPELRRAADAGKDQSYFLFATTEEQLDYLRFPLGHLNKEQTREL 252

Query: 184 AQDIG 188
           A  +G
Sbjct: 253 AAALG 257


>gi|330502363|ref|YP_004379232.1| argininosuccinate synthase [Pseudomonas mendocina NK-01]
 gi|328916649|gb|AEB57480.1| argininosuccinate synthase [Pseudomonas mendocina NK-01]
          Length = 405

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 59/205 (28%), Gaps = 13/205 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MADVKKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQALGVKEI 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +         + T      +   ++    +  R I         A
Sbjct: 61  ------YIDDLREEFVRDFVYPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN------LGMESHVTVHTPLMWLKK 177
              G T         +   Y       + A     +      L   +           KK
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHAIPIERHGKK 174

Query: 178 YETWKLAQDIGGQDLVNLILEESHT 202
              + +  ++        +LE++ T
Sbjct: 175 KSPYSMDANLLHISYEGGVLEDTWT 199


>gi|88809316|ref|ZP_01124824.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Synechococcus sp. WH 7805]
 gi|88786535|gb|EAR17694.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Synechococcus sp. WH 7805]
          Length = 528

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 49/190 (25%), Gaps = 19/190 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST          D++  +  D G   K E E                
Sbjct: 225 KRVLLALSGGVDSSTLAFLLKKAIGDQLTCMFIDQGFMRKGEPEF--------------L 270

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D       + +  +                +           R              L 
Sbjct: 271 MDFFDRKFNIHVEYINARQRFLEKLKDITDPEQKRKIIGTEFIRVFEEESRRLGPFDYLA 330

Query: 128 ITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              +   V E+  +       +     I++      L  +    +  PL  L K E  K+
Sbjct: 331 QGTLYPDVIESAGTNVDPKTGERVAVKIKSHHNVGGLPKDLQFKLVEPLRKLFKDEVRKV 390

Query: 184 AQDIGGQDLV 193
            + +G  + +
Sbjct: 391 GRSLGLPEEI 400


>gi|212703506|ref|ZP_03311634.1| hypothetical protein DESPIG_01551 [Desulfovibrio piger ATCC 29098]
 gi|212673074|gb|EEB33557.1| hypothetical protein DESPIG_01551 [Desulfovibrio piger ATCC 29098]
          Length = 514

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 50/186 (26%), Gaps = 18/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DS+            R+  +  D G     E E              + 
Sbjct: 218 KHVVCALSGGIDSTVVAVLLHKAIGHRLHCIFVDNGLLRLNEGE--------------EV 263

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              L E   L L  +          ++   ++D       +    I      A     + 
Sbjct: 264 VSYLREHFDLNLNFVQAQ---DRFLDLLKGVEDPEKKRKIIGHTFIDIFDEEAKKLPEVE 320

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    +   S         I++      L     + +  PL  L K E  K+A ++
Sbjct: 321 YLAQGTLYPDVIESVSHKGPSAVIKSHHNVGGLPETMKLKLVEPLRELFKDEVRKVAAEL 380

Query: 188 GGQDLV 193
           G  D +
Sbjct: 381 GMPDSI 386


>gi|146281587|ref|YP_001171740.1| argininosuccinate synthase [Pseudomonas stutzeri A1501]
 gi|166221011|sp|A4VIU7|ASSY_PSEU5 RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|145569792|gb|ABP78898.1| argininosuccinate synthase [Pseudomonas stutzeri A1501]
 gi|327479765|gb|AEA83075.1| argininosuccinate synthase [Pseudomonas stutzeri DSM 4166]
          Length = 405

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 59/205 (28%), Gaps = 13/205 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MADVKKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQALGVKEI 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +         + T      +   ++    +  R I         A
Sbjct: 61  ------YIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN------LGMESHVTVHTPLMWLKK 177
              G T         +   Y       + A     +      L   +           KK
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHAIPIERHGKK 174

Query: 178 YETWKLAQDIGGQDLVNLILEESHT 202
              + +  ++        +LE++ T
Sbjct: 175 KSPYSMDANLLHISYEGGVLEDTWT 199


>gi|119775565|ref|YP_928305.1| thiamine biosynthesis protein ThiI [Shewanella amazonensis SB2B]
 gi|189030645|sp|A1S8C9|THII_SHEAM RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|119768065|gb|ABM00636.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
           amazonensis SB2B]
          Length = 484

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 59/182 (32%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + +  R     F+ G         +  +   + ++      +
Sbjct: 182 VLSLISGGFDSGVASFQFIKKGSRTHYCFFNLGG-------AQHEI--GVKQVAYHLWKT 232

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            GE H +          S   + V  +I +             + +  A  +A R+GI  
Sbjct: 233 YGESHKVKF-------VSVPFEEVVTEILERIENGQMGVVLKRMMMRAATRVAERMGIQA 285

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S       + I      +         +  PL+ + K +  + A+ IG +
Sbjct: 286 LVTGESLGQVSSQTLTNLNVIDRSTDLL---------ILRPLISMDKPDIIREARRIGTE 336

Query: 191 DL 192
           D 
Sbjct: 337 DF 338


>gi|260583058|ref|ZP_05850840.1| thiamine biosynthesis/tRNA modification protein ThiI [Haemophilus
           influenzae NT127]
 gi|260093909|gb|EEW77815.1| thiamine biosynthesis/tRNA modification protein ThiI [Haemophilus
           influenzae NT127]
          Length = 485

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W+  
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------TAHEIGVKQMAY-HIWQRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + + V        L    V   + +        A R  I  
Sbjct: 232 SSSHKVRFIAINFEGVVGEILEKVDNGQMGVVLKRMMVRAASKV--------AQRFNIEA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I     A+         V  PL+   K +   +A++IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDEAADAL---------VLRPLITHDKEQIIAMAKEIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|288942041|ref|YP_003444281.1| argininosuccinate synthase [Allochromatium vinosum DSM 180]
 gi|288897413|gb|ADC63249.1| argininosuccinate synthase [Allochromatium vinosum DSM 180]
          Length = 406

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 50/169 (29%), Gaps = 7/169 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L +SGG D+S  L W  ++    V T + D GQ  ++E          + E+    
Sbjct: 7   KKVVLAYSGGLDTSVILKWLQEQYGCEVVTFTADIGQGEELEPARTKAQAAGVKEI---- 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              + +     ++        + T      +   ++    +  R I         A   G
Sbjct: 63  --YIDDLREEFVSDFVFPMFRANTIYEGEYLLGTSIARPLIAKRLIEIAAETGADAIAHG 120

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
            T         + + Y       I A     +L     +  +     + 
Sbjct: 121 ATGKGNDQVRFELTAYALNPEIKIIAPWREWDLLSREKLMAYAESRGIT 169


>gi|307151112|ref|YP_003886496.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Cyanothece sp. PCC 7822]
 gi|306981340|gb|ADN13221.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Cyanothece sp. PCC 7822]
          Length = 353

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 55/185 (29%), Gaps = 15/185 (8%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            ++  SGG DSST  +    +   V  L+        +      C  + +V+     +  
Sbjct: 4   VVVGLSGGVDSSTAAATLHHQGYEVVGLTL------WLMKGKGQCCSEGMVDAAFICEQL 57

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
               HI+    +   +       V+               R + F          LGI  
Sbjct: 58  GIPHHIVDSRDVFQENIIDYL--VSGYEAGITPLPCSQCNRAVKFGPMLRYARQELGIDC 115

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-------VTVHTPLMWLKKYETWKL 183
           I  G            R+  +RA++   +     +            PL    K ET ++
Sbjct: 116 IATGHYARIRYDETTQRYQLLRAVDRNKDQSYFLYDLTQDLLAGTIFPLGNQTKEETRRI 175

Query: 184 AQDIG 188
           A + G
Sbjct: 176 ANEFG 180


>gi|298292472|ref|YP_003694411.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Starkeya novella DSM 506]
 gi|296928983|gb|ADH89792.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Starkeya novella DSM 506]
          Length = 395

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 50/187 (26%), Gaps = 11/187 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--RLCVRKKIVELMPKW 67
             ++  SGG DSS   +        V  ++       +         C  + I +     
Sbjct: 15  RVVVAMSGGVDSSVVAALYAKAGYDVVGVTLQLYDHGEAMHHRPGACCAGQDIYDARTVA 74

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +      ++L           ++ +  A        P   V     +        A  LG
Sbjct: 75  EKLGIPHYVLD---YESRFRHAVIERFADAYAAGETPIPCVDCNRTVKFRDLLETARDLG 131

Query: 128 ITNIVIGVCETDYSGYPDCRHDTI---RAIETAINLGMESHVTVHTPLMWL---KKYETW 181
              +  G   T  +     R        + + +  L   +   +      L    K E  
Sbjct: 132 ADILATGHYVTSRALEGGRRALFRPLDESRDQSYFLYATTQEQIDMLRFPLGETTKPEVR 191

Query: 182 KLAQDIG 188
            LA++ G
Sbjct: 192 ALAEEFG 198


>gi|85057877|ref|YP_456793.1| tRNA (5-methylaminomethyl-2-thioruidylate) methyltransferase [Aster
           yellows witches'-broom phytoplasma AYWB]
 gi|123518066|sp|Q2NIM9|MNMA_AYWBP RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|84789982|gb|ABC65714.1| tRNA (5-methylaminomethyl-2-thioruidylate) methyltransferase [Aster
           yellows witches'-broom phytoplasma AYWB]
          Length = 378

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 53/194 (27%), Gaps = 19/194 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLS---------FDYGQRNKVELEC-------- 52
             ++  SGG DS+        +   VE +          FD      +   C        
Sbjct: 3   KVVVGLSGGVDSAVAAFLLKKQGYLVEAVFMRNWDSNLNFDIQGNPTLNDICPQELDYKD 62

Query: 53  RLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN 112
            L V +++   + +          + ++ +     ++LT N  +   +      F+    
Sbjct: 63  ALKVSEQLGIKLHRVDFIEEYWQKVFMSFIKA-FENNLTPNPDILCNNEIKFRAFIEYVT 121

Query: 113 IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
                    + +   I        +  +                   L  +    +  PL
Sbjct: 122 TKLAPRYIAMGHYANIIYE-TFSEQKLFPQLACAVDQNKDQTYFLSQLATKQLQNILFPL 180

Query: 173 MWLKKYETWKLAQD 186
             L K E  ++A +
Sbjct: 181 GNLTKQEVRQIALE 194


>gi|325578410|ref|ZP_08148545.1| thiamine biosynthesis protein ThiI [Haemophilus parainfluenzae ATCC
           33392]
 gi|325160146|gb|EGC72275.1| thiamine biosynthesis protein ThiI [Haemophilus parainfluenzae ATCC
           33392]
          Length = 483

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W   
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWSRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + + V        L    V G + +        A R  I  
Sbjct: 232 SSSHKVRFIAIPFEGVVGEILEKVDNGQMGVVLKRMMVRGASKV--------AQRFDIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I     A+         V  PL+   K +   +A++IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDEASDAL---------VLRPLITHDKEQIIAMAKEIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|325989606|ref|YP_004249305.1| Trifunctional protein ribF/mnmA [Mycoplasma suis KI3806]
 gi|323574691|emb|CBZ40347.1| Trifunctional protein ribF/mnmA [Mycoplasma suis]
          Length = 369

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 26/79 (32%), Gaps = 4/79 (5%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--QRNKVELECRLCVRK 58
          M+ ++      ++  SGG DSS           +V  +       Q N++E++       
Sbjct: 1  MSSLV--EKKVVIALSGGVDSSVAALLLKKEGYKVFGIHMINWDSQLNELEMDKECESLS 58

Query: 59 KIVELMPKWKDSLGEDHIL 77
          K  E        L     +
Sbjct: 59 KDREYAEIIAQQLEIPFFV 77


>gi|291562415|emb|CBL41231.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [butyrate-producing bacterium SS3/4]
          Length = 358

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 56/225 (24%), Gaps = 14/225 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV---ELECRLCVRKKIVEL 63
                ++  SGG DSS       ++   V  ++    Q       E     C    + + 
Sbjct: 1   MKKKVVVGMSGGVDSSVAACLLKEQGYDVIGVTMQIWQEEDSCTVEENGGCCGLSAVEDA 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      +++        +         +  +  N             L+  +   
Sbjct: 61  RRVAWTLGIPYYVMNFRKEFQKNVIDYFVAEYLHGRTPNPCIACNRYVKWEALLERSLEI 120

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM---WLKKYET 180
               I            +G    R+    A +    L   +   +   LM      K E 
Sbjct: 121 GADYIATGHYARISQLPNGRYTIRNSVTAAKDQTYALYNLTQFQLSKTLMPIGDYTKDEV 180

Query: 181 WKLAQDIGGQDLVNLILEESHTC------YLGKRDKRYEWGYGCN 219
            K+A+D G          E   C      Y G  ++      GC 
Sbjct: 181 RKIAEDRGLAVAKKKDSMEI--CFVPDNDYAGFIEREASDVPGCG 223


>gi|224436863|ref|ZP_03657852.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter cinaedi CCUG
           18818]
 gi|313143341|ref|ZP_07805534.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Helicobacter cinaedi CCUG 18818]
 gi|313128372|gb|EFR45989.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Helicobacter cinaedi CCUG 18818]
          Length = 346

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 54/200 (27%), Gaps = 21/200 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIVELMP 65
               LL SGG DSS C    L +   V  L     D  +++K+ ++    V  ++     
Sbjct: 2   KKVALLMSGGVDSSYCAHLLLSQGYEVIGLYLKLHDKEKKHKIYIKNCEQVASQLGIRFE 61

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                           L +    ++        +    PN       ++        A  
Sbjct: 62  VL-------------DLREEFKKNVYDAFVKSYKAGQTPNPCAVCNPLMKFGLGLQKADE 108

Query: 126 LGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           LG   I  G            R      DT         L   +   +  PL    K E 
Sbjct: 109 LGCDFIATGHYAQIKEINGIKRIAKALDDTKDQSYFLYALPQSAIDRIIFPLGTFTKEEV 168

Query: 181 WKLAQDIGGQDLVNLILEES 200
            K A  +          +ES
Sbjct: 169 KKTALKLLPFLGTLETYKES 188


>gi|221639030|ref|YP_002525292.1| tRNA-specific 2-thiouridylase MnmA [Rhodobacter sphaeroides KD131]
 gi|254811459|sp|B9KR64|MNMA_RHOSK RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|221159811|gb|ACM00791.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhodobacter sphaeroides KD131]
          Length = 379

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 47/188 (25%), Gaps = 10/188 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +        V  ++   Y     +  +   C  + I +     +
Sbjct: 19  RVVVAMSGGVDSSVVAAELAAEGYDVVGVTLQLYDHGAALAKKGACCAGRDIHDARRVAE 78

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL-- 126
                 ++L           ++    A        P   +     +        A  L  
Sbjct: 79  TMGFPHYVLDYEN---TFREAVIDEFADAYLAGATPVPCIRCNERVKFKDLLQTAKDLDA 135

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL----KKYETWK 182
                   +        P+       A + +  L   +   +      L     K ET  
Sbjct: 136 DCMATGHYIQRKMGPAGPELHCAADPARDQSYFLFSTTPEQLAFLRFPLGHLASKAETRA 195

Query: 183 LAQDIGGQ 190
           LA   G  
Sbjct: 196 LAARHGLP 203


>gi|149915230|ref|ZP_01903758.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Roseobacter sp. AzwK-3b]
 gi|149810951|gb|EDM70790.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Roseobacter sp. AzwK-3b]
          Length = 379

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 49/184 (26%), Gaps = 6/184 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +   +    V  ++   Y     +  +   C    I +     +
Sbjct: 20  RVVVAMSGGVDSSVVAAQLAEEGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDARRVAE 79

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D     ++L    +   +      +  +                   L+  A        
Sbjct: 80  DMGFPHYVLDYENIFRDAVIDEFADSYLAGATPVPCIRCNERVKFKDLLETARDLDA-DC 138

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL----KKYETWKLA 184
                 +     +  P+       A + +  L   +   +      L     K+ T +LA
Sbjct: 139 MATGHYIQRKMGAHGPELHCAADAARDQSYFLFSTTPEQLDFLRFPLGHLPSKHATRELA 198

Query: 185 QDIG 188
              G
Sbjct: 199 ARYG 202


>gi|301062815|ref|ZP_07203413.1| creatininase [delta proteobacterium NaphS2]
 gi|300443077|gb|EFK07244.1| creatininase [delta proteobacterium NaphS2]
          Length = 778

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/226 (10%), Positives = 52/226 (23%), Gaps = 14/226 (6%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +L SGG+DS        +    V  +  +   R+              V+   +   +  
Sbjct: 163 VLSSGGKDSLLSFGLLNEMDMEVHPVFVNESGRHWFTALNAYRHFSGNVDRTARVWTNSD 222

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
                 L  L  +                     F+ G   I L              ++
Sbjct: 223 RVFNWMLRHLPFVRQDFAGIRSDEYPIRLWTVAVFIFGTLPILLKRGVG-------RLVI 275

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
               +T                + +           H     + ++   +   ++  + +
Sbjct: 276 GDEYDTTRRFSFKGITHYDGLFDQSRYFDNALTRYFHRKGWGVSQFSILRPLSELLIEKI 335

Query: 193 VNLILE----ESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEF 234
           +            +C+   +D        C  C  C  R    +  
Sbjct: 336 LVERYPALQRHQVSCHAAHKDGERV--KPCGRCEKCM-RIIALLRA 378


>gi|223041195|ref|ZP_03611447.1| tRNA methyl transferase [Campylobacter rectus RM3267]
 gi|222877554|gb|EEF12683.1| tRNA methyl transferase [Campylobacter rectus RM3267]
          Length = 328

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 31/102 (30%), Gaps = 2/102 (1%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL+LFSGG DS   +     +   V  +  D G     + +    +R++  E   + K 
Sbjct: 2   KALVLFSGGLDSMIAIRLLTAQGIDVTAIHIDIGF--SGDEKKAEILRRRANEAGAELKI 59

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
               +  L   +           N  +              R
Sbjct: 60  INIRNEYLRDVLFTPKHGYGKHFNPCIDCHGYMFKTALAMMR 101


>gi|29840521|ref|NP_829627.1| MesJ/Ycf62 family protein [Chlamydophila caviae GPIC]
 gi|61216617|sp|Q822B9|TILS_CHLCV RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
          Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
          Full=tRNA(Ile)-lysidine synthetase
 gi|29834870|gb|AAP05505.1| MesJ/Ycf62 family protein [Chlamydophila caviae GPIC]
          Length = 317

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 25/72 (34%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          +    S LL  SGG DS   L     R      +  D+G R     E      +   E +
Sbjct: 19 LDMKKSYLLALSGGSDSLFLLYLLKSRGVAFTAVHVDHGWRESSYREAEELKIRCEEEGI 78

Query: 65 PKWKDSLGEDHI 76
          P   D +  ++ 
Sbjct: 79 PILIDHVPPEYR 90


>gi|17538240|ref|NP_502120.1| hypothetical protein B0035.16 [Caenorhabditis elegans]
 gi|20141962|sp|Q17440|MTU1_CAEEL RecName: Full=Probable mitochondrial tRNA-specific 2-thiouridylase
           1
 gi|13548315|emb|CAA97418.2| C. elegans protein B0035.16, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 375

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 53/198 (26%), Gaps = 10/198 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSF------DYGQRN---KVELECRLCVRKK 59
           P  ++  SGG DS+        R   V  L        + G  +     +      V  +
Sbjct: 2   PRVVIGMSGGVDSAVSAFLLKKRGFDVIGLHMINWDVQEEGTSHCPRSKDESDARNVCDR 61

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +              + + L  L +  +   T       Q           R      F 
Sbjct: 62  LNIPFHTVNFVKEYWNDVFLKFLENYKNGRTTVPDIDCNQSIKFDVFHKIAREKFNADFI 121

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW-LKKY 178
           AT  Y            +           D ++     +    +  +      +  L+K 
Sbjct: 122 ATGHYATTNFGDFQQNAKDSDEIRLFSGKDPLKDQTFFLCTVNQEQLKRAMFPLGSLQKS 181

Query: 179 ETWKLAQDIGGQDLVNLI 196
           E  ++A++ G Q++    
Sbjct: 182 EVKRIAEEQGFQEVAKKP 199


>gi|300774165|ref|ZP_07084033.1| ExsB superfamily protein [Sphingobacterium spiritivorum ATCC 33861]
 gi|300758976|gb|EFK55804.1| ExsB superfamily protein [Sphingobacterium spiritivorum ATCC 33861]
          Length = 198

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 61/213 (28%), Gaps = 33/213 (15%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           LL SGG DS                 + +YGQ               ++ +  K  +   
Sbjct: 8   LLLSGGVDSICLAYGLKPD----IAYTINYGQIPASREIYVSRYICNLLRIQHKVIE--- 60

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
               +    LG     +  +      Q+      + P RN + +  AA  A +  I  + 
Sbjct: 61  ----VNCKSLGSGILINEERLDISPSQE------WWPYRNQLLITLAAMQAIKDKIGVL- 109

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
             +       +          +   +    E ++++         +E  K        ++
Sbjct: 110 -HLASVKSDSFHKDGTPQFYDLINELVKYQEGNISIVCESTGYYSHELVKK------YNV 162

Query: 193 VNLILEESHTCYLGKRDKRYEWGYGCNSCPACY 225
              I+  +H+C        +     C  CP C 
Sbjct: 163 PLEIIAFAHSC--------HISNTACGQCPGCK 187


>gi|169832175|ref|YP_001718157.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Desulforudis audaxviator MP104C]
 gi|205816638|sp|B1I677|MNMA_DESAP RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|169639019|gb|ACA60525.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Desulforudis audaxviator MP104C]
          Length = 343

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 55/213 (25%), Gaps = 22/213 (10%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +  SGG DSST      +   RV TL+     R              +     +    LG
Sbjct: 6   VALSGGVDSSTTALLMKEAGHRVFTLTMATNDR--------------VAAEAARVSAFLG 51

Query: 73  -EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA----TLAYRLG 127
              H+L ++ L +           ++ +  N             L   A       +  G
Sbjct: 52  LPHHVLDISGLFEQRVIGPFCAAYLEGRTPNPCIACNRDLKYGTLFRQAVEWGADYFATG 111

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
               V    E         R            L  E    +  PL  L K    + A+  
Sbjct: 112 HYARVRFEPEPGRYVLLRARDPRKDQSYVLFYLDQERLARLLLPLGDLTKETVREKARAA 171

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNS 220
           G         E    C++   D R      C  
Sbjct: 172 GIPFTAAESQEI---CFVAGDDYRTFIRRRCGQ 201


>gi|170717619|ref|YP_001784700.1| thiamine biosynthesis protein ThiI [Haemophilus somnus 2336]
 gi|189030633|sp|B0UUA1|THII_HAES2 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|168825748|gb|ACA31119.1| thiamine biosynthesis/tRNA modification protein ThiI [Haemophilus
           somnus 2336]
          Length = 484

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 61/183 (33%), Gaps = 27/183 (14%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-RNKVELECRLCVRKKIVELMPKWKD 69
            L L SGG DS       + R  RV    F+ G   +++ ++               WK 
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGGATHEIGVKQM---------AYHIWKR 230

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G   +  +AI  +   + + + V        L    V   + +        A R GI 
Sbjct: 231 FSGSHKVRFVAINFEQVVAEILEKVDNGQMGVVLKRMMVRAASKV--------AQRFGIQ 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      S         I  +  ++         V  PL+   K +    A++IG 
Sbjct: 283 AIVTGEALGQVSSQTLTNLRLIDEVAESL---------VLRPLITHDKEQIIAKAKEIGT 333

Query: 190 QDL 192
           +D+
Sbjct: 334 EDI 336


>gi|99035878|ref|ZP_01314930.1| hypothetical protein Wendoof_01000225 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 370

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 57/182 (31%), Gaps = 8/182 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
            A++  SGG DSS   +   +   +V  ++   YG           C   + +    +  
Sbjct: 20  KAVVAMSGGVDSSVAAALLHNLGYKVVGMTLQLYGTDGNANARKGACCAGQDIYDAKRVA 79

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +S+G  H +      +I    + ++ A        P   V     +       +   LG 
Sbjct: 80  ESVGFPHYI--LNYEEIFKKEVIEDFASTYMRGETPIPCVRCNQTVKFRDLLQVTKNLGA 137

Query: 129 TNIVIGVC----ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM-WLKKYETWKL 183
             +V G      E +         D  +     +    +  + +    +    K +  KL
Sbjct: 138 DVLVTGHYVRRLEKNGEVKLCRSIDKSKDQSYFLFATTQEQLKLLRFPLGGFYKSDIRKL 197

Query: 184 AQ 185
           A+
Sbjct: 198 AK 199


>gi|289810346|ref|ZP_06540975.1| queuosine biosynthesis protein QueC [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 56

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 9/63 (14%)

Query: 165 HVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPAC 224
            +   TPLMW+ K ETW LA   G    ++L+ EE+ TCY G +      G GC  C AC
Sbjct: 3   DIRFETPLMWIDKAETWALADYWGQ---LDLVREETLTCYNGIK------GDGCGHCAAC 53

Query: 225 YLR 227
            LR
Sbjct: 54  NLR 56


>gi|156088637|ref|XP_001611725.1| tRNA methyl transferase family protein [Babesia bovis]
 gi|154798979|gb|EDO08157.1| tRNA methyl transferase family protein [Babesia bovis]
          Length = 665

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 51/188 (27%), Gaps = 11/188 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN---------KVELECRLCVRKKI 60
               L SGG DS+  L     R   +E                     +LE  + V K +
Sbjct: 288 RVACLVSGGVDSAVALWLLKSRGFDIEAFYLKVWSVENGDLGDCQWSADLEHAMGVTKLL 347

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
              +            +    +   S    T N  +   +      F+           A
Sbjct: 348 NVPLHVVPFQDVYHQRVLDPFVAGASLG-ETPNPDVCCNEFIKFGAFLDYAVRWGFSHIA 406

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           +  Y   I ++V     T  +    CR            L       V  PL  L K E 
Sbjct: 407 SGHYASIIEDLV-PGTSTRIARLRLCRDLRKDQTYFLSRLSQSQLRRVMFPLSQLYKNEV 465

Query: 181 WKLAQDIG 188
             +A+ +G
Sbjct: 466 RTIARTLG 473


>gi|148381238|ref|YP_001255779.1| GMP synthase [Clostridium botulinum A str. ATCC 3502]
 gi|153933266|ref|YP_001385613.1| GMP synthase [Clostridium botulinum A str. ATCC 19397]
 gi|153935009|ref|YP_001389019.1| GMP synthase [Clostridium botulinum A str. Hall]
 gi|226738421|sp|A7FYP0|GUAA_CLOB1 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226738422|sp|A5I720|GUAA_CLOBH RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|148290722|emb|CAL84853.1| GMP synthase [glutamine-hydrolyzing] [Clostridium botulinum A str.
           ATCC 3502]
 gi|152929310|gb|ABS34810.1| GMP synthase [Clostridium botulinum A str. ATCC 19397]
 gi|152930923|gb|ABS36422.1| GMP synthase [Clostridium botulinum A str. Hall]
          Length = 510

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 58/187 (31%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS            ++  +  D+G   K E +    + K   ++    
Sbjct: 216 KKVICALSGGVDSSVAAVIVHKAIGKQLTCVFVDHGLLRKDEGDQVERIFKDQFDMNLIR 275

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            ++           LG +   S  +     I +               +      A +LG
Sbjct: 276 VNAQDR-------FLGKLKGVSDPERKRKIIGEEF-------------IRVFEEEAKKLG 315

Query: 128 -ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I+ +V G    D          TI++      L  +    +  PL  L K E   + ++
Sbjct: 316 DISFLVQGTIYPDIVESGTNTSATIKSHHNVGGLPEDMEFKLIEPLRELFKDEVRAVGEE 375

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 376 LGIPHKL 382


>gi|260776525|ref|ZP_05885420.1| thiamine biosynthesis protein ThiI [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260607748|gb|EEX34013.1| thiamine biosynthesis protein ThiI [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 482

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 57/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  +V    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGP-------AHEI--GVKQVSHYLWNK 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G       +       S   + V  +I +             +F+  A  +A + GI  
Sbjct: 231 YG-------SSAKVRFISIDFEPVVAEILEKVDDGQMGVILKRMFMRAAGMVAEKFGIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K +   LA+DIG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIINLARDIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|152989325|ref|YP_001347006.1| argininosuccinate synthase [Pseudomonas aeruginosa PA7]
 gi|166221007|sp|A6V1S1|ASSY_PSEA7 RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|150964483|gb|ABR86508.1| argininosuccinate synthase [Pseudomonas aeruginosa PA7]
          Length = 405

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 59/205 (28%), Gaps = 13/205 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MADVKKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKARAMGVREI 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +         + T      +   ++    +  R I         A
Sbjct: 61  ------YIDDLREEFVRDFVYPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN------LGMESHVTVHTPLMWLKK 177
              G T         +   Y       + A     +      L   +           KK
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHGIPIERHGKK 174

Query: 178 YETWKLAQDIGGQDLVNLILEESHT 202
              + +  ++        +LE++ T
Sbjct: 175 KSPYSMDANLLHISYEGGVLEDTWT 199


>gi|260062425|ref|YP_003195505.1| tRNA-specific 2-thiouridylase MnmA [Robiginitalea biformata
           HTCC2501]
 gi|88783988|gb|EAR15159.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Robiginitalea biformata HTCC2501]
          Length = 399

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 46/194 (23%), Gaps = 13/194 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      ++  SGG DSS        +   V  L       + V +           + +
Sbjct: 1   MGTTRKVVVGLSGGVDSSVTALLLKQQGYEVIGLFMKNWHDDSVTISRECPWLDDSNDAL 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +        +    L       +   +  + Q    PN  V     I       +A 
Sbjct: 61  IVAEKLGIPFQTVD---LSAAYKERIVNYMFREYQQGRTPNPDVLCNREIKFDLFLKIAM 117

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTI----------RAIETAINLGMESHVTVHTPLMW 174
            LG   +  G                                   L  E       P+  
Sbjct: 118 DLGADFVATGHYCRKDEATGPDGQVRYRLLAGADANKDQSYFLCQLNQEQLSRALFPIGH 177

Query: 175 LKKYETWKLAQDIG 188
           L+K E   LA + G
Sbjct: 178 LQKSEVRALAAENG 191


>gi|301106300|ref|XP_002902233.1| tRNA(Ile)-lysidine synthase, putative [Phytophthora infestans
           T30-4]
 gi|262098853|gb|EEY56905.1| tRNA(Ile)-lysidine synthase, putative [Phytophthora infestans
           T30-4]
          Length = 665

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 57/187 (30%), Gaps = 25/187 (13%)

Query: 13  LLFSGGQDSSTCLSWALDR-----FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  SGG DS                  +  +  DYG R +   EC         + + +W
Sbjct: 229 VSLSGGVDSMVVAYLMHKLKEKHGDFTIVAVHLDYGNRPESGAEC---------DYVRRW 279

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +  G   +  +  + ++  ++  ++   KI      +T+        +       +R  
Sbjct: 280 CERFG--IVFHVRRIDEVKRATTRRDDYEKISREIRYSTYAEVMQKYHIPGMCFGHHRGD 337

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +   VI       S                    + + V +  PL+ L+K   ++ A   
Sbjct: 338 VQENVISNMMKGLSLLNLNGMQAS---------SVVNGVRIWRPLLDLEKDVIFEFAHRY 388

Query: 188 GGQDLVN 194
           G     +
Sbjct: 389 GVPYFKD 395


>gi|116328677|ref|YP_798397.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Leptospira borgpetersenii serovar Hardjo-bovis L550]
 gi|116330666|ref|YP_800384.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Leptospira borgpetersenii serovar Hardjo-bovis JB197]
 gi|122281579|sp|Q04TZ4|MNMA_LEPBJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|122283538|sp|Q04ZN1|MNMA_LEPBL RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|116121421|gb|ABJ79464.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Leptospira borgpetersenii serovar Hardjo-bovis L550]
 gi|116124355|gb|ABJ75626.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Leptospira borgpetersenii serovar Hardjo-bovis JB197]
          Length = 377

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 53/189 (28%), Gaps = 11/189 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETL---SFDYGQRNKVELECRLCVRKKIVELM 64
               ++  SGG DS+      ++    V  +   +++Y        +   C  + I +  
Sbjct: 3   KGKIIVAMSGGVDSAVTAGLLMEEGYEVIGVNLRTWEYEAPVCDTTKKSCCSPEDIRDAR 62

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     +++ +  +          +     Q    PN  V     +        A 
Sbjct: 63  DVGLSLKIPFYVVKMEKVFQEKVIDRFID---DYQHGKTPNPCVECNTFVKFGALFEKAK 119

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDT-----IRAIETAINLGMESHVTVHTPLMWLKKYE 179
            LGI  I  G                              L  E+   V  PL  + K E
Sbjct: 120 ALGIDKIATGHYARIVRNGERYAISNGVDIGKNQAYYLYGLSQENLKNVTFPLGGMTKPE 179

Query: 180 TWKLAQDIG 188
             ++A+ +G
Sbjct: 180 VREIARRMG 188


>gi|317968376|ref|ZP_07969766.1| GMP synthase [Synechococcus sp. CB0205]
          Length = 531

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 51/190 (26%), Gaps = 19/190 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST          D++  +  D G   K E E                
Sbjct: 228 KRVLLALSGGVDSSTLAFLLHKAIGDQLTCMFIDQGFMRKGEPEF--------------L 273

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D   +   + +  +                ++          R              L 
Sbjct: 274 MDFFDKKFHIRVEYINARERFINKLAGVTDPEEKRKLIGTEFIRVFEEESKRLGPFDYLA 333

Query: 128 ITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              +   V E+  +       +     I++      L  +    +  PL  L K E  K+
Sbjct: 334 QGTLYPDVIESAGTNVDPKTGERVAVKIKSHHNVGGLPKDLQFKLVEPLRRLFKDEVRKV 393

Query: 184 AQDIGGQDLV 193
            + +G  + +
Sbjct: 394 GRTLGLPEEI 403


>gi|261868090|ref|YP_003256012.1| thiamine biosynthesis protein ThiI [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261413422|gb|ACX82793.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 485

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 54/182 (29%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       L R  RV    F+ G            +  K +     W+  
Sbjct: 180 VLSLISGGFDSGVSSYMLLRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWQRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + +NV        L    V   + I        A R  I  
Sbjct: 232 GSSHKVRFVAINFEGVVGEILENVDNGQMGVVLKRMMVRAASKI--------AQRFDIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I      +         V  PL+   K +   +A+ IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDEAAEGL---------VLRPLITHDKEQIIAMAKHIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|253998326|ref|YP_003050389.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylovorus sp. SIP3-4]
 gi|313200400|ref|YP_004039058.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylovorus sp. MP688]
 gi|253985005|gb|ACT49862.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylovorus sp. SIP3-4]
 gi|312439716|gb|ADQ83822.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylovorus sp. MP688]
          Length = 361

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 38/131 (29%), Gaps = 5/131 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS       ++   V  L     + +  +  C    ++ +++     
Sbjct: 3   KKRVVVGLSGGVDSSVTALLLKEQGYDVVGLFMKNWEDDDTDEYCP--AKQDLIDAAAVA 60

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                E   +            + +N   + Q    PN  +   + I        A  LG
Sbjct: 61  DKIGIELEAVN---FSKEYKERVFQNFLEEYQAGRTPNPDIFCNSEIKFKAFLDHAMGLG 117

Query: 128 ITNIVIGVCET 138
              I  G    
Sbjct: 118 ADLIATGHYAQ 128


>gi|330016186|ref|ZP_08308416.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Klebsiella sp. MS 92-3]
 gi|328529471|gb|EGF56376.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Klebsiella sp. MS 92-3]
          Length = 388

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 53/189 (28%), Gaps = 9/189 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +     ++  SGG DSS      L +  +VE L     + +  E  C       + + 
Sbjct: 21  MSESQKKVIVGMSGGVDSSVSAYLLLQQGYKVEGLFMKNWEEDDGEEYC--TAAADLADA 78

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +             +  + I F  F    A
Sbjct: 79  QAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAA 136

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            +                 L  E       P+  L+K 
Sbjct: 137 EDLGADYIATGHYVRRADVNGKSQLLRGLDGNKDQSYFLYTLSHEQIAQSLFPVGELEKP 196

Query: 179 ETWKLAQDI 187
           +  K+A+++
Sbjct: 197 QVRKIAEEL 205


>gi|322421564|ref|YP_004200787.1| argininosuccinate synthase [Geobacter sp. M18]
 gi|320127951|gb|ADW15511.1| argininosuccinate synthase [Geobacter sp. M18]
          Length = 406

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 63/204 (30%), Gaps = 17/204 (8%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCV---RKKIV 61
           K+    +L +SGG D+S  L W  +     V T S D GQ +++E            K+ 
Sbjct: 4   KEVKKIVLAYSGGLDTSIILKWLKNEYGCEVVTFSADLGQGDELEPVREKAFKTGADKV- 62

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
             +   ++    D + P+     I   S     ++           +  R +        
Sbjct: 63  -YIDDLREEFVRDFVYPMFRANAIYEGSYLLGTSIARP-------LIAKRQMEIAKLEGC 114

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP----LMWLKK 177
            A   G T         +   Y      T+ A      L     +  +       + + K
Sbjct: 115 DAVSHGATGKGNDQVRFELGYYHFNPAITVIAPWREWKLNSRQALINYAKRNDIPIPITK 174

Query: 178 YETWKLAQDIGGQDLVNLILEESH 201
              W   +++        ILE++ 
Sbjct: 175 KRPWSSDRNLLHISFEGGILEDTW 198


>gi|74204229|dbj|BAE39875.1| unnamed protein product [Mus musculus]
          Length = 692

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 2/61 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        D+   +  D G   K E +      KK+   +   
Sbjct: 238 KVLVLLSGGVDSTVCTALLNRALNQDQDIAVHIDNGFMRKRESQSVEEALKKLGIQVKVI 297

Query: 68  K 68
            
Sbjct: 298 N 298


>gi|15598721|ref|NP_252215.1| argininosuccinate synthase [Pseudomonas aeruginosa PAO1]
 gi|107103037|ref|ZP_01366955.1| hypothetical protein PaerPA_01004106 [Pseudomonas aeruginosa PACS2]
 gi|116051524|ref|YP_789640.1| argininosuccinate synthase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218890248|ref|YP_002439112.1| argininosuccinate synthase [Pseudomonas aeruginosa LESB58]
 gi|254236450|ref|ZP_04929773.1| argininosuccinate synthase [Pseudomonas aeruginosa C3719]
 gi|254242185|ref|ZP_04935507.1| argininosuccinate synthase [Pseudomonas aeruginosa 2192]
 gi|296387972|ref|ZP_06877447.1| argininosuccinate synthase [Pseudomonas aeruginosa PAb1]
 gi|313108870|ref|ZP_07794853.1| argininosuccinate synthase [Pseudomonas aeruginosa 39016]
 gi|24211531|sp|Q9HY84|ASSY_PSEAE RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|122260664|sp|Q02QZ6|ASSY_PSEAB RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|226729198|sp|B7UVV5|ASSY_PSEA8 RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|9949674|gb|AAG06913.1|AE004773_2 argininosuccinate synthase [Pseudomonas aeruginosa PAO1]
 gi|115586745|gb|ABJ12760.1| argininosuccinate synthase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126168381|gb|EAZ53892.1| argininosuccinate synthase [Pseudomonas aeruginosa C3719]
 gi|126195563|gb|EAZ59626.1| argininosuccinate synthase [Pseudomonas aeruginosa 2192]
 gi|218770471|emb|CAW26236.1| argininosuccinate synthase [Pseudomonas aeruginosa LESB58]
 gi|310881355|gb|EFQ39949.1| argininosuccinate synthase [Pseudomonas aeruginosa 39016]
          Length = 405

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 59/205 (28%), Gaps = 13/205 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MADVKKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKARAMGVKEI 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +         + T      +   ++    +  R I         A
Sbjct: 61  ------YIDDLREEFVRDFVYPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN------LGMESHVTVHTPLMWLKK 177
              G T         +   Y       + A     +      L   +           KK
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHGIPIERHGKK 174

Query: 178 YETWKLAQDIGGQDLVNLILEESHT 202
              + +  ++        +LE++ T
Sbjct: 175 KSPYSMDANLLHISYEGGVLEDTWT 199


>gi|317500695|ref|ZP_07958913.1| GMP synthase domain-containing protein [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|316897889|gb|EFV19942.1| GMP synthase domain-containing protein [Lachnospiraceae bacterium
           8_1_57FAA]
          Length = 430

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 55/182 (30%), Gaps = 20/182 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +  +     ++  +  ++G   K E E  + V +  +     + 
Sbjct: 137 KVLLALSGGVDSSVVAAMLIKAIGQQLVCVHVNHGLMRKNESESVVEVFRNQLHANLIYV 196

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D+           LG + + S  +     I    +       R +             GI
Sbjct: 197 DAT-------ERFLGKLENVSDPEEKRKIIGGEFIRVFEEEARKL------------EGI 237

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G    D           +++      L  +    +  PL  L K E      ++G
Sbjct: 238 DFLGQGTIYPDIIESGTKTAKMVKSHHNVGGLPEDLQFELVEPLKQLFKDEVRACGIELG 297

Query: 189 GQ 190
             
Sbjct: 298 LP 299


>gi|227529026|ref|ZP_03959075.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus vaginalis ATCC 49540]
 gi|227351038|gb|EEJ41329.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus vaginalis ATCC 49540]
          Length = 377

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 50/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D  K     ++  SGG DSS        +   V  +             C     +  
Sbjct: 1   MSD--KSHTRVVVGMSGGVDSSVTALLLKRQGYDVVGVFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + K    + +    PN  V     I      
Sbjct: 57  KDVAKVATKIGIPYYSVN---FEKEYWDRVFKYFIAEYKKGRTPNPDVICNKEIKFKAFI 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A +LG   +  G             H      +          L  +    V  PL  
Sbjct: 114 DYANQLGADYVATGHYADLKRDADGRMHLMRAKDQNKDQTYFLSQLDYQQLDKVLFPLAN 173

Query: 175 LKKYETWKLAQDIG 188
             K E  ++A++ G
Sbjct: 174 YTKPEIRQIAEEAG 187


>gi|150003843|ref|YP_001298587.1| tRNA-specific 2-thiouridylase MnmA [Bacteroides vulgatus ATCC 8482]
 gi|205810962|sp|A6KZV1|MNMA3_BACV8 RecName: Full=tRNA-specific 2-thiouridylase mnmA 3
 gi|149932267|gb|ABR38965.1| putative tRNA methyltransferase [Bacteroides vulgatus ATCC 8482]
          Length = 375

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 49/190 (25%), Gaps = 8/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  +    L+  SGG DSS       ++   V  ++                    ++E 
Sbjct: 1   MNNRDKRVLVGMSGGIDSSATCIMLQEQGYEVVGVTMRTWDVPSRFSTPGQDEPDDVLEA 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
               +    E H+  +          + K+   +      PN  V    +         A
Sbjct: 61  RALAERLGIEHHVADV---RKEFKQIIVKHFIDEYMQGRTPNPCVLCNPLFKERILCEWA 117

Query: 124 YRLGITNI----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW-LKKY 178
            +    +I       + E     Y     D  +     +    +  +      +    K 
Sbjct: 118 DQTNCAHISTGHYCRLEERKGKLYIVAGDDQTKDQSYFLWKLPQEILQRFLFPLGTYTKQ 177

Query: 179 ETWKLAQDIG 188
           E  +  +  G
Sbjct: 178 EVREYLRQKG 187


>gi|153815930|ref|ZP_01968598.1| hypothetical protein RUMTOR_02175 [Ruminococcus torques ATCC 27756]
 gi|331089830|ref|ZP_08338723.1| GMP synthase 2 [Lachnospiraceae bacterium 3_1_46FAA]
 gi|145846749|gb|EDK23667.1| hypothetical protein RUMTOR_02175 [Ruminococcus torques ATCC 27756]
 gi|330403527|gb|EGG83085.1| GMP synthase 2 [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 430

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 55/182 (30%), Gaps = 20/182 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +  +     ++  +  ++G   K E E  + V +  +     + 
Sbjct: 137 KVLLALSGGVDSSVVAAMLIKAIGQQLVCVHVNHGLMRKNESESVVEVFRNQLHANLIYV 196

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D+           LG + + S  +     I    +       R +             GI
Sbjct: 197 DAT-------ERFLGKLENVSDPEEKRKIIGGEFIRVFEEEARKL------------EGI 237

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G    D           +++      L  +    +  PL  L K E      ++G
Sbjct: 238 DFLGQGTIYPDIIESGTKTAKMVKSHHNVGGLPEDLQFELVEPLKQLFKDEVRACGIELG 297

Query: 189 GQ 190
             
Sbjct: 298 LP 299


>gi|113461045|ref|YP_719112.1| thiamine biosynthesis protein ThiI [Haemophilus somnus 129PT]
 gi|122945282|sp|Q0I3G4|THII_HAES1 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|112823088|gb|ABI25177.1| [ThiS-adenylate] sulfurtransferase [Haemophilus somnus 129PT]
          Length = 484

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 60/183 (32%), Gaps = 27/183 (14%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-RNKVELECRLCVRKKIVELMPKWKD 69
            L L SGG DS       + R  RV    F+ G   +++ ++               WK 
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGGATHEIGVKQM---------AYHIWKR 230

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G   +  +AI  +   + + + V        L    V   + +        A R GI 
Sbjct: 231 FSGSHKVRFVAINFEQVVAEILEKVDNGQMGVVLKRMMVRAASKV--------AQRFGIQ 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      S         I     ++         V  PL+   K +    A++IG 
Sbjct: 283 AIVTGEALGQVSSQTLTNLRLIDEAAESL---------VLRPLITHDKEQIIAKAKEIGT 333

Query: 190 QDL 192
           +D+
Sbjct: 334 EDI 336


>gi|332558047|ref|ZP_08412369.1| tRNA-specific 2-thiouridylase MnmA [Rhodobacter sphaeroides WS8N]
 gi|332275759|gb|EGJ21074.1| tRNA-specific 2-thiouridylase MnmA [Rhodobacter sphaeroides WS8N]
          Length = 379

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 47/188 (25%), Gaps = 10/188 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +        V  ++   Y     +  +   C  + I +     +
Sbjct: 19  RVVVAMSGGVDSSVVAAELAAEGYDVVGVTLQLYDHGAALAKKGACCAGRDIHDARRVAE 78

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL-- 126
                 ++L           ++    A        P   +     +        A  L  
Sbjct: 79  TMGFPHYVLDYEN---TFREAVIDEFADAYLAGATPVPCIRCNERVKFKDLLQTAKDLDA 135

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL----KKYETWK 182
                   +        P+       A + +  L   +   +      L     K ET  
Sbjct: 136 DCMATGHYIQRKMGPAGPELHCAADAARDQSYFLFSTTPEQLAFLRFPLGHLASKAETRA 195

Query: 183 LAQDIGGQ 190
           LA   G  
Sbjct: 196 LAARHGLP 203


>gi|76789009|ref|YP_328095.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chlamydia trachomatis A/HAR-13]
 gi|123606993|sp|Q3KM75|MNMA_CHLTA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|76167539|gb|AAX50547.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chlamydia trachomatis A/HAR-13]
          Length = 358

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 54/186 (29%), Gaps = 9/186 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSF-DYGQRNKVELECRLCVRKKIVELM 64
              + ++  SGG DSS        +    V  L   ++G++++          + +  + 
Sbjct: 1   MRKTVIVAMSGGVDSSVVAYLLKKQGEYNVVGLFMKNWGEQDENGECTATKDFRDVERIA 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            +            ++   +      ++ +             +  R I F +    +  
Sbjct: 61  EQLSIPYYT-----VSFSKEYKERVFSRFLREYANGYTPNPDVLCNREIKFDLLQKKVRE 115

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYETWK 182
             G        C     G    R       ++    G        V  PL  + K E  +
Sbjct: 116 LKGDFLATGHYCRGGADGTGLSRGIDPNKDQSYFLCGTPKDALSNVLFPLGGVYKTEVRR 175

Query: 183 LAQDIG 188
           +AQ+ G
Sbjct: 176 IAQEAG 181


>gi|253996737|ref|YP_003048801.1| argininosuccinate synthase [Methylotenera mobilis JLW8]
 gi|253983416|gb|ACT48274.1| argininosuccinate synthase [Methylotenera mobilis JLW8]
          Length = 406

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 50/158 (31%), Gaps = 9/158 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  ++E          + E+
Sbjct: 1   MSNVNKVVLAYSGGLDTSVILKWLQDEYKCEVVTYTADLGQGEELEPARAKAKAAGVKEI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                ++    D + P+         + T      +   ++    +  R I         
Sbjct: 61  FIDDVREEFVRDFVFPM-------FRANTVYEGEYLLGTSIARPLIAKRLIEVARDTKAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         +   Y    +  I A     +L
Sbjct: 114 AISHGATGKGNDQVRFELGAYALNPNIQIIAPWREWDL 151


>gi|166154184|ref|YP_001654302.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis 434/Bu]
 gi|166155059|ref|YP_001653314.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301335429|ref|ZP_07223673.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis L2tet1]
 gi|259533695|sp|B0B969|TILS_CHLT2 RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|259533707|sp|B0BAU8|TILS_CHLTB RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|165930172|emb|CAP03656.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis 434/Bu]
 gi|165931047|emb|CAP06610.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 321

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 49/191 (25%), Gaps = 22/191 (11%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K    LL  SGG DS   +     R      +  DYG R     E             
Sbjct: 19  LDKKKKYLLALSGGSDSLFLMYLLKSRAIFFTAVHVDYGWRETSYQEASDLAA------- 71

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
               +      IL      D   S   +N A + +                         
Sbjct: 72  --LCEQEQIPFILDRPEATDPMDSRDIENAARRYRYELFYRLCKEKCFSGVF---LGHHA 126

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                 I+  V E  + G        +          M   V +  PL+ + K++  +  
Sbjct: 127 DDQAETILKRVFEGAHLGNLKGMSAQV----------MYRDVALLRPLLHIPKHKIVEAL 176

Query: 185 QDIGGQDLVNL 195
                Q + ++
Sbjct: 177 DSHQVQYVQDI 187


>gi|157273520|gb|ABV27419.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Chloracidobacterium thermophilum]
          Length = 392

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 58/198 (29%), Gaps = 17/198 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC-------RLCVRKK 59
                 +  SGG DSST  +   ++   V   S     + ++ ++        R C    
Sbjct: 1   MTERIAVAMSGGVDSSTAAALLKEQGYDVVGFSMQLWNQRRINVDAEGNPLPSRCCSLDD 60

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           + +     +      ++L      +   + + +   +   + N P+  V   + +     
Sbjct: 61  LYDARAVAEALGIPFYVLN---FEEEFEARVVRPFVVSYLNGNTPSPCVACNSRMKFDTL 117

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHD-------TIRAIETAINLGMESHVTVHTPL 172
             LA  +G   +  G            R +                 L  E       PL
Sbjct: 118 VALARDVGAAKVATGHYARVQFNDTTGRWELRKGRDLHKDQSYFLFELTQEQLAWALFPL 177

Query: 173 MWLKKYETWKLAQDIGGQ 190
             L K ET  LA+  G  
Sbjct: 178 GELSKAETRALARRYGLP 195


>gi|71908904|ref|YP_286491.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Dechloromonas aromatica RCB]
 gi|123626679|sp|Q47AW0|MNMA_DECAR RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|71848525|gb|AAZ48021.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Dechloromonas aromatica RCB]
          Length = 365

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 40/133 (30%), Gaps = 6/133 (4%)

Query: 7   KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
            +   +++  SGG DSS        +   V  L     + +  E  C     + ++++M 
Sbjct: 1   MSKKTVVVGLSGGVDSSVAALLLKQQGWNVIGLFMKNWEDDDTEEYCSSR--QDLIDVMS 58

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  +  ++            +      + Q    PN  +   + I        A +
Sbjct: 59  VADKIGIDVEVVN---FAAEYRERVFAEFLSEYQAGRTPNPDILCNSEIKFKAFLDHAMQ 115

Query: 126 LGITNIVIGVCET 138
           LG   I  G    
Sbjct: 116 LGAEKIATGHYAG 128


>gi|332877855|ref|ZP_08445593.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332684150|gb|EGJ57009.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 378

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 48/192 (25%), Gaps = 7/192 (3%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  +    L+  SGG DSS      LD    V  ++       +   +        I + 
Sbjct: 1   MEHERKKVLVGMSGGIDSSAVCLMLLDEGYEVVGVTMRVWDLPRQFADTGQEYPDFIQDA 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      ++                +  +  +  N      P          A  A
Sbjct: 61  RALAARLGIAHYVADERTAFKDIVVRNFVDEYLAGRTPNPCVMCNPA---FKFRVLAEWA 117

Query: 124 YRLGITNI----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            +LG   I     + V E        C  D  +     +    +  ++     +   + E
Sbjct: 118 DKLGCDYIATGHYVRVKEEGGRYGLYCGVDGKKDQSYFLWRLGQDVLSRCIFPLGALRKE 177

Query: 180 TWKLAQDIGGQD 191
             +      G +
Sbjct: 178 DVRGYLARKGFE 189


>gi|330723585|gb|AEC45955.1| tRNA-specific 2-thiouridylase MnmA [Mycoplasma hyorhinis MCLD]
          Length = 370

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 50/197 (25%), Gaps = 31/197 (15%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF------------------DYGQRNKVELE 51
             ++  SGG DSS        +   V  +                    D+    + + +
Sbjct: 3   KVVIGMSGGVDSSVAAYLLKQQGYEVIGVFMRNWDSTLNNDIKGNDSYNDFICPQEKDWQ 62

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
               V KK+               I  +  + +         +             +  +
Sbjct: 63  DAQEVCKKLN------------IPIYRVDFIKEYWEEVFEDFIEKYKSGKTPNPDILCNK 110

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHD-TIRAIETAINLGMESHVTVHT 170
           NI F  F         +  I +G      +G      D T         L          
Sbjct: 111 NIKFKHFLDYALKTFNVDFIAMGHYAKTENGKLFKAKDLTKDQSYFLAQLNNYQLSKTIF 170

Query: 171 PLMWLKKYETWKLAQDI 187
           PL  + K E  K+A ++
Sbjct: 171 PLANITKTEVRKIATEL 187


>gi|297581279|ref|ZP_06943203.1| thiamin biosynthesis protein ThiI [Vibrio cholerae RC385]
 gi|297534595|gb|EFH73432.1| thiamin biosynthesis protein ThiI [Vibrio cholerae RC385]
          Length = 515

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 55/184 (29%), Gaps = 29/184 (15%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWK 68
            L L SGG DS       + R  +V    F+ G         +    + +K         
Sbjct: 212 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQTAYYLWQKYGSSAKV-- 269

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   + +              V  +I +             +F+  A  +A + GI
Sbjct: 270 ------RFIAIDFA----------PVVAEILEKIDDGQMGVVLKRMFMRTAGMVAEKFGI 313

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G      S         I  +   +         +  PL+   K +  +LA++IG
Sbjct: 314 QALVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIIRLAREIG 364

Query: 189 GQDL 192
            +D 
Sbjct: 365 TEDF 368


>gi|255744685|ref|ZP_05418636.1| thiamine biosynthesis protein ThiI [Vibrio cholera CIRS 101]
 gi|255737716|gb|EET93110.1| thiamine biosynthesis protein ThiI [Vibrio cholera CIRS 101]
          Length = 471

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 55/184 (29%), Gaps = 29/184 (15%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWK 68
            L L SGG DS       + R  +V    F+ G         +    + +K         
Sbjct: 168 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQTAYYLWQKYGSSAKV-- 225

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   + +              V  +I +             +F+  A  +A + GI
Sbjct: 226 ------RFIAIDFA----------PVVAEILEKIDDGQMGVVLKRMFMRTAGMVAEKFGI 269

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G      S         I  +   +         +  PL+   K +  +LA++IG
Sbjct: 270 QALVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIIRLAREIG 320

Query: 189 GQDL 192
            +D 
Sbjct: 321 TEDF 324


>gi|322420793|ref|YP_004200016.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Geobacter sp. M18]
 gi|320127180|gb|ADW14740.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Geobacter sp. M18]
          Length = 357

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 59/220 (26%), Gaps = 26/220 (11%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC---RLCVR 57
           M+   K    A+ + SGG DSST  +   ++   V  ++    +R   + +       V 
Sbjct: 1   MSADYKGKKIAVAM-SGGVDSSTVAALLKEQGAEVIGINMKLFRREGEDPQAKGDARIVA 59

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           + +     +         ++                          PN  V     +   
Sbjct: 60  EYLGIEFHQVHLEEEFARLIMEDFRSQYL-------------GGETPNPCVRCNRYVKFG 106

Query: 118 FAATLAYRLGITNI---VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
                A  LG   +          D SG          A + +  L   +   +   L  
Sbjct: 107 LLLDKALELGADYLATGHYVRTSRDDSGTYHLLKAAHLAKDQSYFLYTLTQPQLARVLFP 166

Query: 175 L----KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDK 210
           L     K E  K A   G         +E   C++   D 
Sbjct: 167 LGDMPSKDEVRKRAAAFGIPVAQKSDSQEI--CFVPGDDY 204


>gi|229525510|ref|ZP_04414915.1| thiamine biosynthesis protein ThiI [Vibrio cholerae bv. albensis
           VL426]
 gi|229339091|gb|EEO04108.1| thiamine biosynthesis protein ThiI [Vibrio cholerae bv. albensis
           VL426]
          Length = 483

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 55/184 (29%), Gaps = 29/184 (15%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWK 68
            L L SGG DS       + R  +V    F+ G         +    + +K         
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQTAYYLWQKYGSSAKV-- 237

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   + +              V  +I +             +F+  A  +A + GI
Sbjct: 238 ------RFIAIDFA----------PVVAEILEKIDDGQMGVVLKRMFMRTAGMVAEKFGI 281

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G      S         I  +   +         +  PL+   K +  +LA++IG
Sbjct: 282 QALVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIIRLAREIG 332

Query: 189 GQDL 192
            +D 
Sbjct: 333 TEDF 336


>gi|229530003|ref|ZP_04419393.1| thiamine biosynthesis protein ThiI [Vibrio cholerae 12129(1)]
 gi|229333777|gb|EEN99263.1| thiamine biosynthesis protein ThiI [Vibrio cholerae 12129(1)]
 gi|327483631|gb|AEA78038.1| Thiamine biosynthesis protein thiI [Vibrio cholerae LMA3894-4]
          Length = 483

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 55/184 (29%), Gaps = 29/184 (15%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWK 68
            L L SGG DS       + R  +V    F+ G         +    + +K         
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQTAYYLWQKYGSSAKV-- 237

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   + +              V  +I +             +F+  A  +A + GI
Sbjct: 238 ------RFIAIDFA----------PVVAEILEKIDDGQMGVVLKRMFMRTAGMVAEKFGI 281

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G      S         I  +   +         +  PL+   K +  +LA++IG
Sbjct: 282 QALVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIIRLAREIG 332

Query: 189 GQDL 192
            +D 
Sbjct: 333 TEDF 336


>gi|256824827|ref|YP_003148787.1| tRNA-specific 2-thiouridylase MnmA [Kytococcus sedentarius DSM
           20547]
 gi|256688220|gb|ACV06022.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Kytococcus sedentarius DSM 20547]
          Length = 416

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 52/193 (26%), Gaps = 17/193 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR--KKIVELMPKW 67
             +   SGG DS+   +  +D    V  +     Q  +   E        +   +     
Sbjct: 16  RVVAAMSGGVDSAVAAARMIDAGHEVTGVHLALSQSAETLRESARGCCTLEDAGDARRVA 75

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                  ++     + +     + ++   + +    PN  +     I        A  LG
Sbjct: 76  DALGIPFYVWD---MAERFRRDVIEDFVAEYEAGRTPNPCLRCNESIKFAALLDKAVALG 132

Query: 128 ---------ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWL 175
                       + +     +     +       A + +  LG+     +   H PL   
Sbjct: 133 FDAVATGHYAQVVEVPDPAAEGGVRRELHRAVDAAKDQSYVLGVLDADQLARAHFPLGDT 192

Query: 176 KKYETWKLAQDIG 188
            K +  + A   G
Sbjct: 193 TKPQIREEAARRG 205


>gi|254285567|ref|ZP_04960531.1| thiamin biosynthesis protein ThiI [Vibrio cholerae AM-19226]
 gi|150424429|gb|EDN16366.1| thiamin biosynthesis protein ThiI [Vibrio cholerae AM-19226]
          Length = 515

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 55/184 (29%), Gaps = 29/184 (15%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWK 68
            L L SGG DS       + R  +V    F+ G         +    + +K         
Sbjct: 212 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQTAYYLWQKYGSSAKV-- 269

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   + +              V  +I +             +F+  A  +A + GI
Sbjct: 270 ------RFIAIDFA----------PVVAEILEKIDDGQMGVVLKRMFMRTAGMVAEKFGI 313

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G      S         I  +   +         +  PL+   K +  +LA++IG
Sbjct: 314 QALVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIIRLAREIG 364

Query: 189 GQDL 192
            +D 
Sbjct: 365 TEDF 368


>gi|153827042|ref|ZP_01979709.1| thiamin biosynthesis protein ThiI [Vibrio cholerae MZO-2]
 gi|149739083|gb|EDM53379.1| thiamin biosynthesis protein ThiI [Vibrio cholerae MZO-2]
          Length = 515

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 55/184 (29%), Gaps = 29/184 (15%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWK 68
            L L SGG DS       + R  +V    F+ G         +    + +K         
Sbjct: 212 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQTAYYLWQKYGSSAKV-- 269

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   + +              V  +I +             +F+  A  +A + GI
Sbjct: 270 ------RFIAIDFA----------PVVAEILEKIDDGQMGVVLKRMFMRTAGMVAEKFGI 313

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G      S         I  +   +         +  PL+   K +  +LA++IG
Sbjct: 314 QALVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIIRLAREIG 364

Query: 189 GQDL 192
            +D 
Sbjct: 365 TEDF 368


>gi|147678886|ref|YP_001213101.1| GMP synthase [Pelotomaculum thermopropionicum SI]
 gi|146274983|dbj|BAF60732.1| hypothetical GMP synthase [Pelotomaculum thermopropionicum SI]
          Length = 513

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 59/189 (31%), Gaps = 22/189 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +  AL   SGG DSS           DR+  +  ++G   K E      V+K   E    
Sbjct: 218 SGRALCALSGGVDSSVAAVLVHRAVGDRLTCVFVNHGLLRKGE---AEQVQKTFKEKFKM 274

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +         + G    +       +  ++              F+      A  L
Sbjct: 275 NLIYVDARRRFLSRLAG---VTDPEMKRKIIGEE--------------FIRVFEDQAAAL 317

Query: 127 G-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           G +  +V G    D           I++      L  +    +  PL WL K E  +L +
Sbjct: 318 GQVDFLVQGTLYPDVVESGTATAAVIKSHHNVGCLPGDMRFGLVEPLRWLFKDEVRELGE 377

Query: 186 DIGGQDLVN 194
           ++G  + V 
Sbjct: 378 EMGLPEEVI 386


>gi|254225119|ref|ZP_04918733.1| thiamin biosynthesis protein ThiI [Vibrio cholerae V51]
 gi|125622506|gb|EAZ50826.1| thiamin biosynthesis protein ThiI [Vibrio cholerae V51]
          Length = 515

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 55/184 (29%), Gaps = 29/184 (15%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWK 68
            L L SGG DS       + R  +V    F+ G         +    + +K         
Sbjct: 212 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQTAYYLWQKYGSSAKV-- 269

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   + +              V  +I +             +F+  A  +A + GI
Sbjct: 270 ------RFIAIDFA----------PVVAEILEKIDDGQMGVVLKRMFMRTAGMVAEKFGI 313

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G      S         I  +   +         +  PL+   K +  +LA++IG
Sbjct: 314 QALVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIIRLAREIG 364

Query: 189 GQDL 192
            +D 
Sbjct: 365 TEDF 368


>gi|153802280|ref|ZP_01956866.1| thiamin biosynthesis protein ThiI [Vibrio cholerae MZO-3]
 gi|124122162|gb|EAY40905.1| thiamin biosynthesis protein ThiI [Vibrio cholerae MZO-3]
          Length = 515

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 55/184 (29%), Gaps = 29/184 (15%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWK 68
            L L SGG DS       + R  +V    F+ G         +    + +K         
Sbjct: 212 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQTAYYLWQKYGSSAKV-- 269

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   + +              V  +I +             +F+  A  +A + GI
Sbjct: 270 ------RFIAIDFA----------PVVAEILEKIDDGQMGVVLKRMFMRTAGMVAEKFGI 313

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G      S         I  +   +         +  PL+   K +  +LA++IG
Sbjct: 314 QALVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIIRLAREIG 364

Query: 189 GQDL 192
            +D 
Sbjct: 365 TEDF 368


>gi|153215993|ref|ZP_01950215.1| thiamine biosynthesis/tRNA modification protein ThiI [Vibrio
           cholerae 1587]
 gi|229513006|ref|ZP_04402472.1| thiamine biosynthesis protein ThiI [Vibrio cholerae TMA 21]
 gi|124114506|gb|EAY33326.1| thiamine biosynthesis/tRNA modification protein ThiI [Vibrio
           cholerae 1587]
 gi|229349899|gb|EEO14853.1| thiamine biosynthesis protein ThiI [Vibrio cholerae TMA 21]
          Length = 483

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 55/184 (29%), Gaps = 29/184 (15%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWK 68
            L L SGG DS       + R  +V    F+ G         +    + +K         
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQTAYYLWQKYGSSAKV-- 237

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   + +              V  +I +             +F+  A  +A + GI
Sbjct: 238 ------RFIAIDFA----------PVVAEILEKIDDGQMGVVLKRMFMRTAGMVAEKFGI 281

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G      S         I  +   +         +  PL+   K +  +LA++IG
Sbjct: 282 QALVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIIRLAREIG 332

Query: 189 GQDL 192
            +D 
Sbjct: 333 TEDF 336


>gi|121588123|ref|ZP_01677870.1| thiamin biosynthesis protein ThiI [Vibrio cholerae 2740-80]
 gi|121728347|ref|ZP_01681377.1| thiamin biosynthesis protein ThiI [Vibrio cholerae V52]
 gi|147673207|ref|YP_001216372.1| thiamine biosynthesis protein ThiI [Vibrio cholerae O395]
 gi|153817197|ref|ZP_01969864.1| thiamin biosynthesis protein ThiI [Vibrio cholerae NCTC 8457]
 gi|227081070|ref|YP_002809621.1| thiamin biosynthesis protein ThiI [Vibrio cholerae M66-2]
 gi|298498984|ref|ZP_07008791.1| thiamine biosynthesis protein ThiI [Vibrio cholerae MAK 757]
 gi|121547614|gb|EAX57713.1| thiamin biosynthesis protein ThiI [Vibrio cholerae 2740-80]
 gi|121629402|gb|EAX61832.1| thiamin biosynthesis protein ThiI [Vibrio cholerae V52]
 gi|126512231|gb|EAZ74825.1| thiamin biosynthesis protein ThiI [Vibrio cholerae NCTC 8457]
 gi|146315090|gb|ABQ19629.1| thiamin biosynthesis protein ThiI [Vibrio cholerae O395]
 gi|227008958|gb|ACP05170.1| thiamin biosynthesis protein ThiI [Vibrio cholerae M66-2]
 gi|227012714|gb|ACP08924.1| thiamin biosynthesis protein ThiI [Vibrio cholerae O395]
 gi|297543317|gb|EFH79367.1| thiamine biosynthesis protein ThiI [Vibrio cholerae MAK 757]
          Length = 515

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 55/184 (29%), Gaps = 29/184 (15%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWK 68
            L L SGG DS       + R  +V    F+ G         +    + +K         
Sbjct: 212 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQTAYYLWQKYGSSAKV-- 269

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   + +              V  +I +             +F+  A  +A + GI
Sbjct: 270 ------RFIAIDFA----------PVVAEILEKIDDGQMGVVLKRMFMRTAGMVAEKFGI 313

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G      S         I  +   +         +  PL+   K +  +LA++IG
Sbjct: 314 QALVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIIRLAREIG 364

Query: 189 GQDL 192
            +D 
Sbjct: 365 TEDF 368


>gi|229505500|ref|ZP_04395010.1| thiamine biosynthesis protein ThiI [Vibrio cholerae BX 330286]
 gi|262168685|ref|ZP_06036380.1| thiamine biosynthesis protein ThiI [Vibrio cholerae RC27]
 gi|229357723|gb|EEO22640.1| thiamine biosynthesis protein ThiI [Vibrio cholerae BX 330286]
 gi|262022803|gb|EEY41509.1| thiamine biosynthesis protein ThiI [Vibrio cholerae RC27]
          Length = 483

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 55/184 (29%), Gaps = 29/184 (15%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWK 68
            L L SGG DS       + R  +V    F+ G         +    + +K         
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQTAYYLWQKYGSSAKV-- 237

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   + +              V  +I +             +F+  A  +A + GI
Sbjct: 238 ------RFIAIDFA----------PVVAEILEKIDDGQMGVVLKRMFMRTAGMVAEKFGI 281

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G      S         I  +   +         +  PL+   K +  +LA++IG
Sbjct: 282 QALVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIIRLAREIG 332

Query: 189 GQDL 192
            +D 
Sbjct: 333 TEDF 336


>gi|15640910|ref|NP_230541.1| thiamine biosynthesis protein ThiI [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|153823689|ref|ZP_01976356.1| thiamin biosynthesis protein ThiI [Vibrio cholerae B33]
 gi|254848029|ref|ZP_05237379.1| thiamine biosynthesis protein ThiI [Vibrio cholerae MO10]
 gi|9655349|gb|AAF94056.1| thiamin biosynthesis protein ThiI [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|126518792|gb|EAZ76015.1| thiamin biosynthesis protein ThiI [Vibrio cholerae B33]
 gi|254843734|gb|EET22148.1| thiamine biosynthesis protein ThiI [Vibrio cholerae MO10]
          Length = 515

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 55/184 (29%), Gaps = 29/184 (15%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWK 68
            L L SGG DS       + R  +V    F+ G         +    + +K         
Sbjct: 212 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQTAYYLWQKYGSSAKV-- 269

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   + +              V  +I +             +F+  A  +A + GI
Sbjct: 270 ------RFIAIDFA----------PVVAEILEKIDDGQMGVVLKRMFMRTAGMVAEKFGI 313

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G      S         I  +   +         +  PL+   K +  +LA++IG
Sbjct: 314 QALVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIIRLAREIG 364

Query: 189 GQDL 192
            +D 
Sbjct: 365 TEDF 368


>gi|86147425|ref|ZP_01065737.1| thiamine biosynthesis protein ThiI [Vibrio sp. MED222]
 gi|218710364|ref|YP_002417985.1| thiamine biosynthesis protein ThiI [Vibrio splendidus LGP32]
 gi|254784241|sp|B7VJ96|THII_VIBSL RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|85834718|gb|EAQ52864.1| thiamine biosynthesis protein ThiI [Vibrio sp. MED222]
 gi|218323383|emb|CAV19560.1| Thiamine biosynthesis protein thiI [Vibrio splendidus LGP32]
          Length = 482

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 57/184 (30%), Gaps = 25/184 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           L L SGG DS       + R  +V    F+ G            +   + ++     D  
Sbjct: 181 LSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGP-------AHEI--GVKQVSHYLWDKY 231

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G    +    +         + V  +I +N            +F+     +A R GI  +
Sbjct: 232 GSSAKVKFISI-------DFEPVVAEILENVEDGQMGVVLKRMFMRAGGMVAERFGIEAL 284

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V G      S         I  +   +         +  PL+   K +   L++ IG +D
Sbjct: 285 VTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIIDLSRKIGTED 335

Query: 192 LVNL 195
              +
Sbjct: 336 FAKV 339


>gi|84394350|ref|ZP_00993071.1| thiamine biosynthesis protein ThiI [Vibrio splendidus 12B01]
 gi|84375009|gb|EAP91935.1| thiamine biosynthesis protein ThiI [Vibrio splendidus 12B01]
          Length = 482

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 57/184 (30%), Gaps = 25/184 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           L L SGG DS       + R  +V    F+ G            +   + ++     D  
Sbjct: 181 LSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGP-------AHEI--GVKQVSHYLWDKY 231

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G    +    +         + V  +I +N            +F+     +A R GI  +
Sbjct: 232 GSSAKVKFISI-------DFEPVVAEILENVEDGQMGVVLKRMFMRAGGMVAERFGIEAL 284

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V G      S         I  +   +         +  PL+   K +   L++ IG +D
Sbjct: 285 VTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIIDLSRKIGTED 335

Query: 192 LVNL 195
              +
Sbjct: 336 FAKV 339


>gi|229510830|ref|ZP_04400309.1| thiamine biosynthesis protein ThiI [Vibrio cholerae B33]
 gi|229517951|ref|ZP_04407395.1| thiamine biosynthesis protein ThiI [Vibrio cholerae RC9]
 gi|229523308|ref|ZP_04412715.1| thiamine biosynthesis protein ThiI [Vibrio cholerae TM 11079-80]
 gi|229608519|ref|YP_002879167.1| thiamine biosynthesis protein ThiI [Vibrio cholerae MJ-1236]
 gi|262161182|ref|ZP_06030293.1| thiamine biosynthesis protein ThiI [Vibrio cholerae INDRE 91/1]
 gi|262191488|ref|ZP_06049673.1| thiamine biosynthesis protein ThiI [Vibrio cholerae CT 5369-93]
 gi|22002002|sp|Q9KTK8|THII_VIBCH RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|229339671|gb|EEO04686.1| thiamine biosynthesis protein ThiI [Vibrio cholerae TM 11079-80]
 gi|229344666|gb|EEO09640.1| thiamine biosynthesis protein ThiI [Vibrio cholerae RC9]
 gi|229350795|gb|EEO15736.1| thiamine biosynthesis protein ThiI [Vibrio cholerae B33]
 gi|229371174|gb|ACQ61597.1| thiamine biosynthesis protein ThiI [Vibrio cholerae MJ-1236]
 gi|262028932|gb|EEY47585.1| thiamine biosynthesis protein ThiI [Vibrio cholerae INDRE 91/1]
 gi|262032636|gb|EEY51189.1| thiamine biosynthesis protein ThiI [Vibrio cholerae CT 5369-93]
          Length = 483

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 55/184 (29%), Gaps = 29/184 (15%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWK 68
            L L SGG DS       + R  +V    F+ G         +    + +K         
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQTAYYLWQKYGSSAKV-- 237

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   + +              V  +I +             +F+  A  +A + GI
Sbjct: 238 ------RFIAIDFA----------PVVAEILEKIDDGQMGVVLKRMFMRTAGMVAEKFGI 281

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G      S         I  +   +         +  PL+   K +  +LA++IG
Sbjct: 282 QALVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIIRLAREIG 332

Query: 189 GQDL 192
            +D 
Sbjct: 333 TEDF 336


>gi|255506865|ref|ZP_05382504.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia trachomatis D(s)2923]
 gi|289525326|emb|CBJ14802.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chlamydia trachomatis Sweden2]
 gi|296434876|gb|ADH17054.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia trachomatis E/150]
 gi|296438596|gb|ADH20749.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia trachomatis E/11023]
          Length = 358

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 54/186 (29%), Gaps = 9/186 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSF-DYGQRNKVELECRLCVRKKIVELM 64
              + ++  SGG DSS        +    V  L   ++G++++          + +  + 
Sbjct: 1   MRKTIIVAMSGGVDSSVVAYLLKKQGECNVVGLFMKNWGEQDENGECTATKDFRDVERIA 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            +            ++   +      ++ +             +  R I F +    +  
Sbjct: 61  EQLSIPYYT-----VSFSKEYKERVFSRFLREYANGYTPNPDVLCNREIKFDLLQKKVRE 115

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYETWK 182
             G        C     G    R       ++    G        V  PL  + K E  +
Sbjct: 116 LKGDFLATGHYCRGGADGTGLSRGIDPNKDQSYFLCGTPKDALSNVLFPLGGMYKTEVRR 175

Query: 183 LAQDIG 188
           +AQ+ G
Sbjct: 176 IAQEAG 181


>gi|92114240|ref|YP_574168.1| thiamine biosynthesis protein ThiI [Chromohalobacter salexigens DSM
           3043]
 gi|91797330|gb|ABE59469.1| [ThiS-adenylate] sulfurtransferase [Chromohalobacter salexigens DSM
           3043]
          Length = 496

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 56/181 (30%), Gaps = 25/181 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           AL L SGG DS       + R  +   L F+ G            V  ++      W+  
Sbjct: 183 ALALISGGYDSPVAAWRMIRRGLKTHYLFFNLGG--AAHERTVREVVHRV------WQGY 234

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +++  +     + + V   +    L            L  A  +A R  I  
Sbjct: 235 SASHRVHFISVPFEEVLDEIQRRVPAGLAGVVLKRMM--------LRAANRVAARARIPA 286

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           ++ G      S          +++     +   S   V  PL+   K    + AQ IG  
Sbjct: 287 LITGDALAQVSS---------QSVTNLGLIDRVSERPVLRPLIADDKQRIIEDAQRIGTA 337

Query: 191 D 191
           +
Sbjct: 338 E 338


>gi|296273128|ref|YP_003655759.1| thiamine biosynthesis/tRNA modification protein ThiI [Arcobacter
           nitrofigilis DSM 7299]
 gi|296097302|gb|ADG93252.1| thiamine biosynthesis/tRNA modification protein ThiI [Arcobacter
           nitrofigilis DSM 7299]
          Length = 490

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 54/181 (29%), Gaps = 25/181 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           L L SGG DS+      + R  +   + F+ G            +   + ++     +  
Sbjct: 191 LSLMSGGFDSTVASYLTMKRGIKTHFVFFNLGG-------IAHEI--GVKQVALYLWNKF 241

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G  H +    +          +V  +I  +            + L  A  +A  L I  +
Sbjct: 242 GSSHRVTFTSI-------PFDDVVTEIFRSTHETYMGVTLKRLMLKAAEKIANDLKIDAL 294

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           + G      S         I      +         V  PL  + K +   +A +IG + 
Sbjct: 295 LTGESVAQVSSQTLRNLALIDQSTNKL---------VLRPLATMNKPDIIDIANEIGTKR 345

Query: 192 L 192
            
Sbjct: 346 F 346


>gi|288936092|ref|YP_003440151.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Klebsiella variicola At-22]
 gi|290510856|ref|ZP_06550226.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Klebsiella sp. 1_1_55]
 gi|288890801|gb|ADC59119.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Klebsiella variicola At-22]
 gi|289777572|gb|EFD85570.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Klebsiella sp. 1_1_55]
          Length = 388

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 53/189 (28%), Gaps = 9/189 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +     ++  SGG DSS      L +  +VE L     + +  E  C       + + 
Sbjct: 21  MSESQKKVIVGMSGGVDSSVSAYLLLQQGYKVEGLFMKNWEEDDGEEYC--TAAADLADA 78

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +             +  + I F  F    A
Sbjct: 79  QAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAA 136

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            +                 L  E       P+  L+K 
Sbjct: 137 EDLGADYIATGHYVRRADVDGKSQLLRGLDGNKDQSYFLYTLSHEQIAQSLFPVGELEKP 196

Query: 179 ETWKLAQDI 187
           +  K+A+++
Sbjct: 197 QVRKIAEEL 205


>gi|251798335|ref|YP_003013066.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Paenibacillus sp. JDR-2]
 gi|247545961|gb|ACT02980.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Paenibacillus sp. JDR-2]
          Length = 377

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/192 (11%), Positives = 46/192 (23%), Gaps = 13/192 (6%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELM 64
           K+    ++  SGG DSS        +   V  +   ++   ++          + +  + 
Sbjct: 5   KQETRVVVGMSGGVDSSVTALLLKQQGYDVVGIFMKNWDDTDEFGHCTAEEDAEDVRRVC 64

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            +            +           T  +    +        +  R  I        A 
Sbjct: 65  DQIGIPYYT-----VNFEKQYFDKVFTYFLDEYKRGRTPNPDVMCNRE-IKFGDFLKKAN 118

Query: 125 RLGITNIVIGVCETDYSGYPDCRH------DTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            LG   +  G                               L  +       P+  L K 
Sbjct: 119 ELGADYLATGHYARVERNEDGETRLLRGVDGNKDQTYFLSALNQKQLEKAMFPIGHLPKP 178

Query: 179 ETWKLAQDIGGQ 190
           E  ++A++ G  
Sbjct: 179 EVRRIAEEAGLY 190


>gi|152969695|ref|YP_001334804.1| tRNA-specific 2-thiouridylase MnmA [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|150954544|gb|ABR76574.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
          Length = 388

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 53/189 (28%), Gaps = 9/189 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +     ++  SGG DSS      L +  +VE L     + +  E  C       + + 
Sbjct: 21  MSESQKKVIVGMSGGVDSSVSAYLLLQQGYKVEGLFMKNWEEDDGEEYC--TAAADLADA 78

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +             +  + I F  F    A
Sbjct: 79  QAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAA 136

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            +                 L  E       P+  L+K 
Sbjct: 137 EDLGADYIATGHYVRRADVDGKSQLLRGLDGNKDQSYFLYTLSHEQIAQSLFPVGELEKP 196

Query: 179 ETWKLAQDI 187
           +  K+A+++
Sbjct: 197 QVRKIAEEL 205


>gi|22299961|ref|NP_683208.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Thermosynechococcus elongatus BP-1]
 gi|44887998|sp|Q8DGA5|GUAA_THEEB RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|22296146|dbj|BAC09970.1| GMP synthetase [Thermosynechococcus elongatus BP-1]
          Length = 535

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 54/186 (29%), Gaps = 11/186 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST          D++  +  D G   K E E    + K   E     
Sbjct: 232 KRVLLALSGGVDSSTLAFLLHRAIGDQLTCMFIDQGFMRKGEPE---RLLKLFQEQFHIK 288

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            + +         ++G         +   K +        V       L     LA    
Sbjct: 289 VEYVNARDRFLAQLVG-------VTDPEEKRKRIGHEFIRVFEEESQRLGPFDYLAQGTL 341

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +++            +     I++      L       +  PL  L K E  ++ + +
Sbjct: 342 YPDVIESANTNIDPQTGERVAVKIKSHHNVGGLPENLRFKLVEPLRKLFKDEVRQVGRSL 401

Query: 188 GGQDLV 193
           G  + +
Sbjct: 402 GLPEEI 407


>gi|262306027|gb|ACY45606.1| gln amidotransferase [Craterostigmus tasmanianus]
          Length = 197

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              L+L SGG DS+ C +      + D+V  L  D G   K E        +K+   +  
Sbjct: 44  NKVLMLVSGGVDSTVCAALLHKALKKDQVIALHIDNGFMRKSETLQVKESLEKLGLKLKI 103

Query: 67  WKDS 70
            + S
Sbjct: 104 VRAS 107


>gi|78485443|ref|YP_391368.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thiomicrospira crunogena XCL-2]
 gi|123555534|sp|Q31GM9|MNMA_THICR RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|78363729|gb|ABB41694.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thiomicrospira crunogena XCL-2]
          Length = 379

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 5/129 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS        +   VE L     + +  E  C     + + +++   + 
Sbjct: 12  KVIVGLSGGVDSSVTALLLKQQGYDVEGLFMKNWEGDDTEDYCP--AAEDLKDVLAICEK 69

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                H+             + ++   + Q    PN  +     +        A  LG  
Sbjct: 70  LDIPLHV---ENFSGEYWDRVFEHFLAEYQSGRTPNPDILCNKEVKFKAFLEHAMTLGAD 126

Query: 130 NIVIGVCET 138
            I  G    
Sbjct: 127 YIATGHYAR 135


>gi|76789585|ref|YP_328671.1| TilS [Chlamydia trachomatis A/HAR-13]
 gi|237803272|ref|YP_002888466.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis B/Jali20/OT]
 gi|237805193|ref|YP_002889347.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255311681|ref|ZP_05354251.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis 6276]
 gi|255317982|ref|ZP_05359228.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis 6276s]
 gi|255349245|ref|ZP_05381252.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis 70]
 gi|255503782|ref|ZP_05382172.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis 70s]
 gi|255507463|ref|ZP_05383102.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis D(s)2923]
 gi|123606544|sp|Q3KKJ9|TILS_CHLTA RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|76168115|gb|AAX51123.1| TilS [Chlamydia trachomatis A/HAR-13]
 gi|231273493|emb|CAX10409.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231274506|emb|CAX11302.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis B/Jali20/OT]
 gi|289525886|emb|CBJ15368.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis Sweden2]
 gi|296435472|gb|ADH17650.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis E/150]
 gi|296436396|gb|ADH18570.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis G/9768]
 gi|296438255|gb|ADH20416.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis G/11074]
 gi|296439189|gb|ADH21342.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis E/11023]
 gi|297140756|gb|ADH97514.1| tRNA(Ile)-lysidine synthase [Chlamydia trachomatis G/9301]
          Length = 321

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 49/191 (25%), Gaps = 22/191 (11%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K    LL  SGG DS   +     R      +  DYG R     E             
Sbjct: 19  LDKKKKYLLALSGGSDSLFLMYLLKSRAIFFTAVHVDYGWRETSYQEASDLAA------- 71

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
               +      IL      D   S   +N A + +                         
Sbjct: 72  --LCEQEQIPFILDRPEATDPMDSRDIENAARRYRYELFYRLCKEKCFSGVF---LGHHA 126

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                 I+  V E  + G        +          M   V +  PL+ + K++  +  
Sbjct: 127 DDQAETILKRVFEGAHLGNLKGMSAQV----------MYRDVALLRPLLHIPKHKIVEAL 176

Query: 185 QDIGGQDLVNL 195
                Q + ++
Sbjct: 177 DSHQVQYVQDI 187


>gi|313905756|ref|ZP_07839115.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Eubacterium cellulosolvens 6]
 gi|313469362|gb|EFR64705.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Eubacterium cellulosolvens 6]
          Length = 363

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/183 (13%), Positives = 48/183 (26%), Gaps = 18/183 (9%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-------------VEL 50
           +  K  + ++  SGG DSS       ++   V  ++    Q                  +
Sbjct: 1   MSNKDKTVVVGMSGGVDSSVAAYLLKEQGYNVIGVTMQIWQDESECRLENEGGCCGVTAV 60

Query: 51  ECRLCVRKKIVE-----LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN 105
           E    V   +          +       D+ +   + G   +  +  N  +K +     +
Sbjct: 61  EDARRVAGVLGIPYYVMNFKEEFQKNVIDYFVDEYLHGRTPNPCIACNRYVKWESLLTKS 120

Query: 106 TFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH 165
             +    I    +A       G   I   V       Y        +   T + +G    
Sbjct: 121 LAIGADYIATGHYARIRHLDNGRYAIANSVTAKKDQTYALYGLTQNQLAHTLMPVGDYEK 180

Query: 166 VTV 168
             V
Sbjct: 181 PKV 183


>gi|262306085|gb|ACY45635.1| gln amidotransferase [Orchesella imitari]
          Length = 196

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 2/57 (3%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
          K    L+L SGG DS+ C +      R D++  +  D G   K E +       +I 
Sbjct: 42 KHHKVLMLLSGGVDSTVCAALLKKALREDQIIAVHVDNGFLRKNESDAVEQSLSRIG 98


>gi|262043152|ref|ZP_06016290.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|259039540|gb|EEW40673.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
          Length = 388

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 53/189 (28%), Gaps = 9/189 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +     ++  SGG DSS      L +  +VE L     + +  E  C       + + 
Sbjct: 21  MSESQKKVIVGMSGGVDSSVSAYLLLQQGYKVEGLFMKNWEEDDGEEYC--TAAADLADA 78

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +             +  + I F  F    A
Sbjct: 79  QAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAA 136

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            +                 L  E       P+  L+K 
Sbjct: 137 EDLGADYIATGHYVRRADVDGKSQLLRGLDGNKDQSYFLYTLSHEQIAQSLFPVGELEKP 196

Query: 179 ETWKLAQDI 187
           +  K+A+++
Sbjct: 197 QVRKIAEEL 205


>gi|237740278|ref|ZP_04570759.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Fusobacterium sp. 2_1_31]
 gi|229422295|gb|EEO37342.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Fusobacterium sp. 2_1_31]
          Length = 334

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 7/82 (8%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVET---LSFDYGQRNKVELECRLCVRKKIV 61
          +K+   AL LFSGG DS+  +    D+   V     +S  +G +     E    + +++ 
Sbjct: 1  MKEKIKALALFSGGLDSALAIKLVQDQGVEVIALNFVSHFFGGK----NEKAEKMAEQLG 56

Query: 62 ELMPKWKDSLGEDHILPLAILG 83
            +           ++   + G
Sbjct: 57 IKLEYIDFKKRHMFVVEDPVYG 78


>gi|222112576|ref|YP_002554840.1| tRNA-specific 2-thiouridylase mnma [Acidovorax ebreus TPSY]
 gi|254811451|sp|B9MIA2|MNMA_DIAST RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|221732020|gb|ACM34840.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acidovorax ebreus TPSY]
          Length = 370

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 45/189 (23%), Gaps = 12/189 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DS+        +   V  +     + +     C         + +     
Sbjct: 5   RVVVGLSGGVDSAVTAHLLKQQGHEVVGIFMKNWEDDDDSEFCSSRQ-----DFLDAASV 59

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +      +            +      + Q    PN  V     I        A RLG  
Sbjct: 60  ADVIGIEIEHVNFAAEYKDRVFAEFLREYQAGRTPNPDVLCNAEIKFKAFLDHAMRLGAE 119

Query: 130 NIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
            I  G                      +         L          P+  L K E  +
Sbjct: 120 KIATGHYARVRQNPATGLFELLKGLDPSKDQSYFLHRLNQAQLSKTLFPVGDLHKTEVRR 179

Query: 183 LAQDIGGQD 191
           +A DIG  +
Sbjct: 180 IAADIGLPN 188


>gi|190571202|ref|YP_001975560.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Wolbachia endosymbiont of Culex quinquefasciatus Pel]
 gi|213018602|ref|ZP_03334410.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Wolbachia endosymbiont of Culex quinquefasciatus JHB]
 gi|229487430|sp|B3CLZ0|MNMA_WOLPP RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|190357474|emb|CAQ54908.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Wolbachia endosymbiont of Culex quinquefasciatus Pel]
 gi|212995553|gb|EEB56193.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Wolbachia endosymbiont of Culex quinquefasciatus JHB]
          Length = 368

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 56/186 (30%), Gaps = 8/186 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A++  SGG DSS   +   +    V  ++      +    +   C  + I +     + 
Sbjct: 20  KAIVAMSGGVDSSVAAALLYNLGYEVIGVTLQLYGSDGNARKGACCAGQDIYDAKYVAES 79

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                +IL      +I    + ++ A        P   V     +       +   LG  
Sbjct: 80  VGFPHYILN---YEEIFKKEVIEDFANTYMRGETPIPCVRCNQTVKFRDLLQVTKNLGAD 136

Query: 130 NIVIGVC----ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM-WLKKYETWKLA 184
            +V G      E +         D  +     +    E  + +    +    K +  KLA
Sbjct: 137 VLVTGHYVRRLEENGEVKLCRSIDKSKDQSYFLFATTEEQLKLLRFPLGGFYKSDIRKLA 196

Query: 185 QDIGGQ 190
           +  G Q
Sbjct: 197 KYFGLQ 202


>gi|283850323|ref|ZP_06367612.1| GMP synthase, large subunit [Desulfovibrio sp. FW1012B]
 gi|283574349|gb|EFC22320.1| GMP synthase, large subunit [Desulfovibrio sp. FW1012B]
          Length = 516

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 48/185 (25%), Gaps = 18/185 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+            ++  +  D G     E E    V   + E       
Sbjct: 222 VVCALSGGVDSTVVAVMLHKAIGKKLHCIFVDNGLLRLGEGE---EVAAYLREHFDLNLH 278

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +    +    + G        K +     +                   A    ++   
Sbjct: 279 YINASKLFLDRLAGVTDPEQKRKIIGTSFIEVFEVE--------------AAKLPKVKYL 324

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                  +   S         I++      L     + +  PL  L K E  K+A ++G 
Sbjct: 325 AQGTLYPDVIESVSFKGPSAVIKSHHNVGGLPDVMKLELIEPLRELFKDEVRKVAVELGM 384

Query: 190 QDLVN 194
            D + 
Sbjct: 385 PDFII 389


>gi|229844086|ref|ZP_04464227.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae 6P18H1]
 gi|229813080|gb|EEP48768.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae 6P18H1]
          Length = 485

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W+  
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWQRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + + V        L    V   + +        A R  I  
Sbjct: 232 SASHKVRFIAINFEGVVGEILEKVDNGQMGVVLKRMMVRAASKV--------AQRFNIEA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I     A+         V  PL+   K +   +A+DIG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDEAADAL---------VLRPLITHDKEQIIAMAKDIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|298206785|ref|YP_003714964.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Croceibacter atlanticus HTCC2559]
 gi|83849417|gb|EAP87285.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Croceibacter atlanticus HTCC2559]
          Length = 396

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 51/187 (27%), Gaps = 12/187 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            S ++  SGG DSS       ++   V  L       + V +           + M   +
Sbjct: 2   KSVVVGLSGGVDSSVSAYLLKEQGYEVIGLFMKNWHDDTVTISDECPWLDDSNDAMLVAE 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   +    L +     +   +  + ++   PN  V     I       +A  LG 
Sbjct: 62  KLGIPFQTVD---LSEEYKERIVDYMFNEYKNGRTPNPDVLCNREIKFDVFMKIAMSLGA 118

Query: 129 TNIVIGVCETDYSGYPDCRHDTI---------RAIETAINLGMESHVTVHTPLMWLKKYE 179
             +  G      S   D                       L  E       P+  L+K E
Sbjct: 119 DYVATGHYCRKSSIEKDGETIYQLLSGKDNNKDQSYFLCQLSQEQLSKTLFPIGELQKSE 178

Query: 180 TWKLAQD 186
             K+A +
Sbjct: 179 VRKIAAE 185


>gi|226943527|ref|YP_002798600.1| argininosuccinate synthase [Azotobacter vinelandii DJ]
 gi|259585350|sp|C1DQV2|ASSY_AZOVD RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|226718454|gb|ACO77625.1| Argininosuccinate synthase [Azotobacter vinelandii DJ]
          Length = 406

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 62/206 (30%), Gaps = 15/206 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MADVKKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQALGVKEI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                ++    D + P+         + T      +   ++    +  R I         
Sbjct: 61  FIDDLREEFVRDFVFPM-------FRANTVYEGEYLLGTSIARPLIAKRLIEIANATGAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN------LGMESHVTVHTPLMWLK 176
           A   G T         +   Y       + A     +      L   +           K
Sbjct: 114 AISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHGIPIERHGK 173

Query: 177 KYETWKLAQDIGGQDLVNLILEESHT 202
           K   + +  ++        +LE++ T
Sbjct: 174 KKSPYSMDANLLHISYEGGVLEDTWT 199


>gi|206576946|ref|YP_002239233.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Klebsiella pneumoniae 342]
 gi|229486343|sp|B5XSN3|MNMA_KLEP3 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|206566004|gb|ACI07780.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Klebsiella pneumoniae 342]
          Length = 368

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 53/189 (28%), Gaps = 9/189 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +     ++  SGG DSS      L +  +VE L     + +  E  C       + + 
Sbjct: 1   MSESQKKVIVGMSGGVDSSVSAYLLLQQGYKVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +             +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            +                 L  E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRADVDGKSQLLRGLDGNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDI 187
           +  K+A+++
Sbjct: 177 QVRKIAEEL 185


>gi|195952741|ref|YP_002121031.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Hydrogenobaculum sp. Y04AAS1]
 gi|226704772|sp|B4U7E2|MNMA_HYDS0 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|195932353|gb|ACG57053.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Hydrogenobaculum sp. Y04AAS1]
          Length = 342

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 43/173 (24%), Gaps = 3/173 (1%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS       ++   V  ++  + +    E     C  K + +            
Sbjct: 7   MSGGVDSSVAAYLLKEQGHDVIGVTLRFYKEECKENARVCCSPKDVQDARIVCDMLGIPH 66

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
             L    L                   N            FL F       +        
Sbjct: 67  ITLDWENLFKERVIDYFIKSYKTGLTPNPCAICNKDVKTAFLGFYLKQTADIDFLATGHY 126

Query: 135 VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           V + +       R            +  +S   +  P+ ++ K E   +A+ I
Sbjct: 127 VIKEEG---KIKRAKEKDQSYFMALVPKQSLDYLMFPVGYMTKQEIRDIAKKI 176


>gi|147669349|ref|YP_001214167.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Dehalococcoides sp. BAV1]
 gi|146270297|gb|ABQ17289.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Dehalococcoides sp. BAV1]
          Length = 361

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 52/190 (27%), Gaps = 10/190 (5%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           ++   +   ++  SGG DSS      L++   V  +S     ++  E        K I  
Sbjct: 4   EMSDSSELVMVAMSGGVDSSVTAMLLLEQGYNVAGVSLQL--KSNNEPYGNGYNLKLINR 61

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                       +++ L+ +      +   +   +      PN  +     + +      
Sbjct: 62  AREVAAALNIPHYVVDLSDIFSQRVIA---DFCQQYSQGRTPNPCIRCNYYVKIGALLNK 118

Query: 123 AYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                   +  G      S                       L  ES   +  PL    K
Sbjct: 119 IQDFKADYLATGHYARIVSDENGTHLLRGADGKKDQSYFLYTLPPESLSRLMFPLGQKYK 178

Query: 178 YETWKLAQDI 187
            +  +LA ++
Sbjct: 179 KDIVRLATNM 188


>gi|332288104|ref|YP_004418956.1| thiamine biosynthesis protein ThiI [Gallibacterium anatis UMN179]
 gi|330431000|gb|AEC16059.1| thiamine biosynthesis protein ThiI [Gallibacterium anatis UMN179]
          Length = 487

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 53/182 (29%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       L R  RV    F+ G            +  K +     W   
Sbjct: 180 VLSLISGGFDSGVSSYMLLRRGCRVHYCFFNLGG-------AAHEIGVKQMAY-HIWNRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +   + + + +        L    V   + +        A R  I  
Sbjct: 232 GSSHKVRFVAINFEKVVAEILEKIDNGQMGVVLKRMMVRAASKV--------ADRFQIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I      +         V  PL+   K +   +A+ IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDEAADCL---------VLRPLISSDKEQIIAMAKQIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|237753451|ref|ZP_04583931.1| argininosuccinate synthase [Helicobacter winghamensis ATCC BAA-430]
 gi|229375718|gb|EEO25809.1| argininosuccinate synthase [Helicobacter winghamensis ATCC BAA-430]
          Length = 403

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 45/159 (28%), Gaps = 5/159 (3%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + K     +L +SGG D+S  L W  D     V T + D GQ  +VE        +K+  
Sbjct: 1   MQKNFKKVVLAYSGGLDTSVILKWLGDTYGCEVVTFTADIGQGEEVEP--ARAKAQKLGI 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                      +  +           + T      +   ++    +  R +         
Sbjct: 59  KPENIFIEDLREEFI--RDFVFPMFRANTIYEGEYLLGTSIARPLIAKRLVEIAKQVGAD 116

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
           A   G T         +   Y       + A     +L 
Sbjct: 117 AISHGATGKGNDQVRFEIGAYALNPDIKVIAPWREWDLN 155


>gi|256371277|ref|YP_003109101.1| GMP synthase, large subunit [Acidimicrobium ferrooxidans DSM 10331]
 gi|256007861|gb|ACU53428.1| GMP synthase, large subunit [Acidimicrobium ferrooxidans DSM 10331]
          Length = 517

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 61/183 (33%), Gaps = 20/183 (10%)

Query: 10  SALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+   +  A    DR+  +  D G     E        +++  L     
Sbjct: 223 RAICALSGGVDSTVAAALTAEAIGDRLTCVFVDTGLLRSGE-------AEQVEHLFR--S 273

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E  ++  A     + + +T   A                 +   +F  T A +   
Sbjct: 274 QFDIELIVVDAADRFFDALAGVTDPEAK----------RKIIGELFIRIFEETAASKTNA 323

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
           T++V G    D          TI++      L  +   T+  PL  L K E  ++  ++G
Sbjct: 324 THLVQGTLYPDIVESGSDGSATIKSHHNVGGLPDDVAFTIVEPLRRLFKDEVRRIGVELG 383

Query: 189 GQD 191
             +
Sbjct: 384 IPE 386


>gi|205822469|sp|A6T7K3|MNMA_KLEP7 RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 368

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 53/189 (28%), Gaps = 9/189 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +     ++  SGG DSS      L +  +VE L     + +  E  C       + + 
Sbjct: 1   MSESQKKVIVGMSGGVDSSVSAYLLLQQGYKVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +             +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            +                 L  E       P+  L+K 
Sbjct: 117 EDLGADYIATGHYVRRADVDGKSQLLRGLDGNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDI 187
           +  K+A+++
Sbjct: 177 QVRKIAEEL 185


>gi|315180894|gb|ADT87808.1| thiamine biosynthesis protein ThiI [Vibrio furnissii NCTC 11218]
          Length = 482

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 57/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  +V    F+ G          + V++    L  K+   
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG-----PAHEIGVKQVAYYLWHKYG-- 232

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                    +       S     V  +I +             +F+  A  +A + GI  
Sbjct: 233 ---------SSAKVRFISVDFAPVVAEILEKVDDGQMGVILKRMFMRAAGQVAEKFGIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K +   +A++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKDDIINVAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|260767263|ref|ZP_05876204.1| thiamine biosynthesis protein ThiI [Vibrio furnissii CIP 102972]
 gi|260617771|gb|EEX42949.1| thiamine biosynthesis protein ThiI [Vibrio furnissii CIP 102972]
          Length = 482

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 57/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  +V    F+ G          + V++    L  K+   
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG-----PAHEIGVKQVAYYLWHKYG-- 232

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                    +       S     V  +I +             +F+  A  +A + GI  
Sbjct: 233 ---------SSAKVRFISVDFAPVVAEILEKVDDGQMGVILKRMFMRAAGQVAEKFGIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K +   +A++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKDDIINVAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|281413177|ref|YP_003347256.1| NAD synthase [Thermotoga naphthophila RKU-10]
 gi|281374280|gb|ADA67842.1| NAD synthase [Thermotoga naphthophila RKU-10]
          Length = 268

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 48/172 (27%), Gaps = 5/172 (2%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           ++ IK     +++FSGG DS+     A +        L+ D     + E+E    +   I
Sbjct: 8   SEAIKSKKKLVVMFSGGVDSTLLAKLAREVLEKNAVALTIDSPVIPRKEIEEAKNLANLI 67

Query: 61  VELMPKWKDS-LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                  + + L   H++            L  N+       N  +    G N   L   
Sbjct: 68  GIRHEFIELNELKSRHLIENPPDRCYLCRKLRDNIVKNWARENGFDVIADGLNFSDLQDY 127

Query: 120 ATLAY---RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV 168
                     GI +  I    T        R   +          + S    
Sbjct: 128 RPGVKASTEDGIWHPFIDFEVTKEEIREYSRKLGLPTWNKPAMACLCSRFPY 179


>gi|15605575|ref|NP_220361.1| PP-loop superfamily ATPase [Chlamydia trachomatis D/UW-3/CX]
 gi|61216368|sp|O84847|TILS_CHLTR RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|3329312|gb|AAC68437.1| PP-loop superfamily ATPase [Chlamydia trachomatis D/UW-3/CX]
 gi|296437327|gb|ADH19497.1| PP-loop superfamily ATPase [Chlamydia trachomatis G/11222]
 gi|297748968|gb|ADI51514.1| TilS [Chlamydia trachomatis D-EC]
 gi|297749848|gb|ADI52526.1| TilS [Chlamydia trachomatis D-LC]
          Length = 321

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 49/191 (25%), Gaps = 22/191 (11%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K    LL  SGG DS   +     R      +  DYG R     E             
Sbjct: 19  LDKKKKYLLALSGGSDSLFLMYLLKSRAIFFTAVHVDYGWRETSYQEASDLAA------- 71

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
               +      IL      D   S   +N A + +                         
Sbjct: 72  --LCEQEQIPFILDRPEATDPMDSRDIENAARRYRYELFYRLCKEKCFSGVF---LGHHA 126

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                 I+  V E  + G        +          M   V +  PL+ + K++  +  
Sbjct: 127 DDQAETILKRVFEGAHLGNLKGMSAQV----------MYRDVALLRPLLHIPKHKIVEAL 176

Query: 185 QDIGGQDLVNL 195
                Q + ++
Sbjct: 177 DSHQVQYVQDI 187


>gi|301156306|emb|CBW15777.1| sulfurtransferase required for thiamine and 4-thiouridine
           biosynthesis [Haemophilus parainfluenzae T3T1]
          Length = 483

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 54/182 (29%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W   
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWNRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + + V        L    V   + +        A R  I  
Sbjct: 232 SSSHKVRFIAIPFEGVVGEILEKVDNGQMGVVLKRMMVRSASKV--------AQRFDIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I     A+         V  PL+   K +   +A++IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDEAADAL---------VLRPLITHDKEQIITMAKEIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|210630940|ref|ZP_03296685.1| hypothetical protein COLSTE_00570 [Collinsella stercoris DSM 13279]
 gi|210160255|gb|EEA91226.1| hypothetical protein COLSTE_00570 [Collinsella stercoris DSM 13279]
          Length = 327

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 55/184 (29%), Gaps = 24/184 (13%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             ALL  SGG DSS   +  +     ++  +  ++G   K E E  + V +  ++    +
Sbjct: 37  KKALLALSGGVDSSVVAALLIKAIGKQLICVHVNHGLMRKGESEQVVDVFRNQLDANLVY 96

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D+           L  +   +  +     I    +       R +   V          
Sbjct: 97  VDATDR-------FLSLLDGVAEPEAKRKIIGAEFIRVFEEEARKVGDEVSFLA------ 143

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                                D ++A      L  +    +  P+  L K E   + +++
Sbjct: 144 ----------QGTIYPDILESDGVKAHHNVGGLPDDLQFELCEPVRLLYKDEVRVVGREL 193

Query: 188 GGQD 191
           G  +
Sbjct: 194 GLPE 197


>gi|189468120|ref|ZP_03016905.1| hypothetical protein BACINT_04514 [Bacteroides intestinalis DSM
           17393]
 gi|189436384|gb|EDV05369.1| hypothetical protein BACINT_04514 [Bacteroides intestinalis DSM
           17393]
          Length = 435

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 52/185 (28%), Gaps = 22/185 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS   +  L    D +  +  ++G   K E      V +     +  
Sbjct: 140 NRKVLLALSGGVDSSVVAALLLKAIGDNLVCVHVNHGLMRKGE---SEDVVEMFGNQLKA 196

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +                   T+    K++    P          F+      A +L
Sbjct: 197 NLIYV-----------------DATERFLTKLEGVEDPEQKRKIIGGEFIRVFEEEARKL 239

Query: 127 -GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            GI  +  G    D           +++      L  +    +  PL  L K E      
Sbjct: 240 DGIDFLGQGTIYPDIVESGTKTAKMVKSHHNVGGLPEDLQFELVEPLRQLFKDEVRACGV 299

Query: 186 DIGGQ 190
           ++G  
Sbjct: 300 ELGLP 304


>gi|83942322|ref|ZP_00954783.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sulfitobacter sp. EE-36]
 gi|83846415|gb|EAP84291.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sulfitobacter sp. EE-36]
          Length = 380

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/149 (11%), Positives = 35/149 (23%), Gaps = 4/149 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +   +    V  ++   Y     +  +   C    I +     +
Sbjct: 22  RVVVAMSGGVDSSVVAAMLAEEGYDVVGVTLQLYDHGAALARKGACCAGIDIHDARRVAE 81

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L       +   ++    A        P   +     +        A  L  
Sbjct: 82  SMGFPHYVLDYEN---VFKDAVIDEFADSYLGGATPVPCIRCNERVKFKDLLETAKDLDA 138

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETA 157
             +  G       G               
Sbjct: 139 DCMATGHYIQRKMGPDGAELHCAADANRD 167


>gi|212692631|ref|ZP_03300759.1| hypothetical protein BACDOR_02128 [Bacteroides dorei DSM 17855]
 gi|212664916|gb|EEB25488.1| hypothetical protein BACDOR_02128 [Bacteroides dorei DSM 17855]
          Length = 375

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 49/190 (25%), Gaps = 8/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  +    L+  SGG DSS       ++   V  ++                    ++E 
Sbjct: 1   MNNRDKRVLVGMSGGIDSSATCIMLQEQGYEVVGVTMRTWDIPSRFSTPGQDEPDDVLEA 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
               +    E H+  +          + K+   +      PN  V    +         A
Sbjct: 61  KALAERLGIEHHVADV---RKEFKQIIVKHFIDEYMQGRTPNPCVLCNPLFKERILCEWA 117

Query: 124 YRLGITNI----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW-LKKY 178
            +    +I       + E     Y     D  +     +    +  +      +    K 
Sbjct: 118 DQTNCAHISTGHYCRLEERKGKLYIVAGDDQTKDQSYFLWKLPQEILQRFLFPLGTYTKQ 177

Query: 179 ETWKLAQDIG 188
           E  +  +  G
Sbjct: 178 EVREYLRQKG 187


>gi|88703376|ref|ZP_01101092.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Congregibacter litoralis KT71]
 gi|88702090|gb|EAQ99193.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Congregibacter litoralis KT71]
          Length = 372

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 37/180 (20%), Gaps = 5/180 (2%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M    K     ++  SGG DSS      L++   VE L       +     C   V    
Sbjct: 1   MTAPAKNTEKVIVGMSGGVDSSVAALILLEQGYDVEGLFMKNWDEDDGTEYCTAKV--DY 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +            H        +   +     +             +  R  I      
Sbjct: 59  ADAQAVADKLGITLH--AANFAAEYWDNVFEHFLDEYRAGRTPNPDILCNRE-IKFRAFL 115

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
             A  LG   I  G        +               +  + +              E 
Sbjct: 116 DYALELGADRIATGHYARRGMRHGRPALCKGLDNNKDQSYFLHAVGHAELSKTLFPLGEI 175


>gi|330993151|ref|ZP_08317089.1| tRNA-specific 2-thiouridylase mnmA [Gluconacetobacter sp. SXCC-1]
 gi|329759921|gb|EGG76427.1| tRNA-specific 2-thiouridylase mnmA [Gluconacetobacter sp. SXCC-1]
          Length = 376

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 47/185 (25%), Gaps = 9/185 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DSS   +  +D    V   +       +   +   C  + I +       
Sbjct: 12  RILVAMSGGVDSSVVAARLVDEGHEVIGATLQLYDSRESTKKGACCAGRDIHDARRVADR 71

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG-- 127
                +++         H S+    A        P   V     +       +A  LG  
Sbjct: 72  LGIPHYVID---AERRFHDSVIGTFADAYAAGETPVPCVACNQGVKFTDLLGMARELGVD 128

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL----KKYETWKL 183
                  V   +    P+         + +  L   +   +      L     K      
Sbjct: 129 AMATGHYVRRVEGPDGPEMHRPVDAGRDQSWFLFATTRDQLDFLRFPLGDMPDKAAVRAE 188

Query: 184 AQDIG 188
           A+  G
Sbjct: 189 AERFG 193


>gi|311029205|ref|ZP_07707295.1| (5-methylaminomethyl-2-thiouridylate)-methyltran sferase [Bacillus
           sp. m3-13]
          Length = 368

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 49/193 (25%), Gaps = 15/193 (7%)

Query: 5   IKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKI 60
           +KK P     ++  SGG DSS       ++   V  +   ++   ++          + +
Sbjct: 1   MKKRPEDTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDESGFCTATEDYEDV 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           +++  +            +           T  +             +     I      
Sbjct: 61  IKVSNQIGIPYYA-----VNFEKQYWDKVFTYFLEEYKSGRTPNPDVMC-NKEIKFKAFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  +G   I  G            R                 L  +       PL  L
Sbjct: 115 NHAMSIGADYIATGHYARVEEKDGQYRLLRGADHNKDQSYFLNALSQKQLSKTMFPLGHL 174

Query: 176 KKYETWKLAQDIG 188
            K E  ++A + G
Sbjct: 175 SKKEVREIAIEAG 187


>gi|265752582|ref|ZP_06088151.1| tRNA methyl transferase [Bacteroides sp. 3_1_33FAA]
 gi|263235768|gb|EEZ21263.1| tRNA methyl transferase [Bacteroides sp. 3_1_33FAA]
          Length = 375

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 49/190 (25%), Gaps = 8/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  +    L+  SGG DSS       ++   V  ++                    ++E 
Sbjct: 1   MNNRDKRVLVGMSGGIDSSATCIMLQEQGYEVVGVTMRTWDVPSRFSTPGQDEPDDVLEA 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
               +    E H+  +          + K+   +      PN  V    +         A
Sbjct: 61  KALAERLGIEHHVADV---RKEFKQIIVKHFIDEYMQGRTPNPCVLCNPLFKERILCEWA 117

Query: 124 YRLGITNI----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW-LKKY 178
            +    +I       + E     Y     D  +     +    +  +      +    K 
Sbjct: 118 DQTNCAHISTGHYCRLEERKGKLYIVAGDDQTKDQSYFLWKLPQEILQRFLFPLGTYTKQ 177

Query: 179 ETWKLAQDIG 188
           E  +  +  G
Sbjct: 178 EVREYLRQKG 187


>gi|255324545|ref|ZP_05365662.1| tRNA-methyltransferase [Corynebacterium tuberculostearicum SK141]
 gi|255298451|gb|EET77751.1| tRNA-methyltransferase [Corynebacterium tuberculostearicum SK141]
          Length = 365

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 49/187 (26%), Gaps = 5/187 (2%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK-KIVEL 63
           +      L+  SGG DSS   + A++    V  +     +  +   E        +    
Sbjct: 1   MGSTMRVLVAMSGGVDSSVAAARAVEAGHEVIGVHLALHKDAQQTREKARGCCSLEDSAD 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
             +  D LG    +      +     +  +          PN  +     I         
Sbjct: 61  ARRICDKLGIPFYVW--DFSEEFKEEVITDFVDSYARGETPNPCLRCNEKIKFRALLQKG 118

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYETW 181
             LG   +  G   T        R       ++ +   +  E       P+    K +  
Sbjct: 119 MALGFDAVATGHYATIDEDGYMRRSLDENKDQSYVLGVISAEELEHCFFPIGDTPKPQIR 178

Query: 182 KLAQDIG 188
           + A   G
Sbjct: 179 EEAAAHG 185


>gi|326796169|ref|YP_004313989.1| Argininosuccinate synthase [Marinomonas mediterranea MMB-1]
 gi|326546933|gb|ADZ92153.1| Argininosuccinate synthase [Marinomonas mediterranea MMB-1]
          Length = 411

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 49/158 (31%), Gaps = 9/158 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  + W  + +   V T + D GQ  +VE          + E+
Sbjct: 1   MSDVKKVVLAYSGGLDTSVIVKWLQEEYQCEVVTFTADLGQGEEVEPARAKAQALGVNEI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                ++    D + P+         + T      +   ++    +  R I         
Sbjct: 61  YIEDLREEFVRDFVFPM-------FRANTIYEGEYLLGTSIARPLIAKRLIEIANETGAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         +   Y       + A     +L
Sbjct: 114 AIAHGATGKGNDQVRFELGAYALKPGVKVVAPWREWDL 151


>gi|313681859|ref|YP_004059597.1| argininosuccinate synthase [Sulfuricurvum kujiense DSM 16994]
 gi|313154719|gb|ADR33397.1| argininosuccinate synthase [Sulfuricurvum kujiense DSM 16994]
          Length = 405

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 49/162 (30%), Gaps = 11/162 (6%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCV---RKK 59
           + K+    +L +SGG D+S  L W  D +   V T + D GQ  +VE      +    K 
Sbjct: 1   MKKEVKKVVLAYSGGLDTSVILKWLQDEYNCEVVTFTADIGQGEEVEPARAKAISLGIKP 60

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
               +   ++    D++ P+     I         ++           +  R        
Sbjct: 61  ENIYIEDLREEFVRDYVFPMFRANAIYEGEYLLGTSIARP-------LIAKRQAEIARIT 113

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
              A   G T         +          TI A     +L 
Sbjct: 114 GADAVSHGATGKGNDQVRFEMGYLGQNSALTIIAPWREWDLN 155


>gi|295396917|ref|ZP_06807041.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Aerococcus viridans ATCC 11563]
 gi|294974851|gb|EFG50554.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Aerococcus viridans ATCC 11563]
          Length = 378

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 46/189 (24%), Gaps = 11/189 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
            K    ++  SGG DSS        +   V  +             C     +   ++  
Sbjct: 7   NKNTRVVVGMSGGVDSSVTALLLKQQGYDVIGIFMKNWDDTDENGFC--TATEDYKDVAA 64

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    + +      +      T  +    +D       +     I        A  
Sbjct: 65  VAAQIGIPYYSIN--FEKEYWDKVFTYFLDEYKRDRTPNPDVMC-NKEIKFKAFLDYALE 121

Query: 126 LGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           LG   +  G             H                 L  +    V  PL  L+K E
Sbjct: 122 LGADYVATGHYAQVERDAKGKVHMLRGLDNNKDQTYFLNQLSQDQLQRVMFPLGHLEKPE 181

Query: 180 TWKLAQDIG 188
             ++A++ G
Sbjct: 182 VRRIAEEAG 190


>gi|331002457|ref|ZP_08325975.1| tRNA-specific 2-thiouridylase mnmA [Lachnospiraceae oral taxon 107
           str. F0167]
 gi|330410273|gb|EGG89707.1| tRNA-specific 2-thiouridylase mnmA [Lachnospiraceae oral taxon 107
           str. F0167]
          Length = 363

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 51/186 (27%), Gaps = 6/186 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL---CVRKKIVEL 63
           +    ++  SGG DSS       +    V  ++    Q    E        C    + + 
Sbjct: 2   EKKKVVVGMSGGVDSSVAAYLLKEAGYDVTGVTMQIWQSEDEEDMSGSGGCCGLSAVDDA 61

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
               +D     +++               N  ++ +  N             L+  + + 
Sbjct: 62  RRVARDIGIPYYVMNFRDEFKDKVIDYFVNEYVQARTPNPCIACNRYVKWESLLERSMML 121

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM---WLKKYET 180
               I        E   +G    R     A +    L   +   +   LM     +K E 
Sbjct: 122 GADYIATGHYARIEKLENGRFALRMSKTSAKDQTYALYNLTQDQLSKTLMPVGDYEKDEI 181

Query: 181 WKLAQD 186
            ++A+ 
Sbjct: 182 REIAKK 187


>gi|301170225|emb|CBW29829.1| sulfurtransferase required for thiamine and 4-thiouridine
           biosynthesis [Haemophilus influenzae 10810]
          Length = 485

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W+  
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWQRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + + V        L    V   + +        A R  I  
Sbjct: 232 SSSHKVRFIAINFEGVVGEILEKVDNGQMGVVLKRMMVRAASKV--------AQRFNIEA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I     A+         V  PL+   K +   +A++IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDEAADAL---------VLRPLITHDKEQIIAMAKEIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|45358916|ref|NP_988473.1| hypothetical protein MMP1353 [Methanococcus maripaludis S2]
 gi|45047782|emb|CAF30909.1| conserved hypothetical protein [Methanococcus maripaludis S2]
          Length = 324

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 58/203 (28%), Gaps = 11/203 (5%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRLCVR 57
           N+II      L+  SGG+DS   L            ++  ++ D                
Sbjct: 69  NNIISPKDKILVGLSGGKDSLALLHLLEPYRRKYGVQIYAVTVDLNINGIRPWTESNKNV 128

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           +KI E             I+     G++   S   +   K  + +   +    R  +   
Sbjct: 129 EKIAEHCKNLN---IPHKIIAHD--GNVVEMSKILSENTKGIEYSPCFSCSMVRRHVLTN 183

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIR--AIETAINLGMESHVTVHTPLMWL 175
           +A           I IG    D S                  I    E+ V      + L
Sbjct: 184 YAKNNFESDSNVKIAIGHTLEDNSDTIMANIFKGNIIKALEPIKNFNETDVDFKDFKLNL 243

Query: 176 KKYETWKLAQDIGGQDLVNLILE 198
           K     +   ++  + +V  ++E
Sbjct: 244 KSCCMIRPMLNVSEEKIVKALVE 266


>gi|292492798|ref|YP_003528237.1| argininosuccinate synthase [Nitrosococcus halophilus Nc4]
 gi|291581393|gb|ADE15850.1| argininosuccinate synthase [Nitrosococcus halophilus Nc4]
          Length = 405

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 48/158 (30%), Gaps = 9/158 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  +     V T + D GQ  +V           + E+
Sbjct: 1   MSTIKKVVLAYSGGLDTSVILKWLRETYGCEVVTFTADIGQGEEVAPARAKAEALGVKEI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
              +  +    D++ P+         + T      +   ++    +  R        +  
Sbjct: 61  YVEELCEEFARDYVFPM-------FRANTLYEGEYLLGTSIARPLIAKRLAEIASETSAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         +   Y       + A     +L
Sbjct: 114 AIAHGATGKGNDQVRFELGAYALRPDIQVIAPWREWDL 151


>gi|262372981|ref|ZP_06066260.1| tRNA methyl transferase [Acinetobacter junii SH205]
 gi|262313006|gb|EEY94091.1| tRNA methyl transferase [Acinetobacter junii SH205]
          Length = 377

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 47/166 (28%), Gaps = 5/166 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS   +  L +  +VE L     + +     C     + + +    
Sbjct: 1   MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGLFMKNWEEDDGTEYC--TALEDLADAQAV 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H    A         + ++   +      PN  +     I        A  L
Sbjct: 59  ADKIGIKLHT---ANFAMEYWDRVFEHFLAEYAAGRTPNPDILCNKEIKFRAFLDHAMTL 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
           G   I  G          + R +T   +   ++   +    +H   
Sbjct: 116 GADFIATGHYARRGVSTQNSRGETYAPLLRGVDNNKDQTYFLHAVH 161


>gi|145638947|ref|ZP_01794555.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae PittII]
 gi|145271919|gb|EDK11828.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae PittII]
 gi|309750916|gb|ADO80900.1| Thiamine biosynthesis protein ThiI [Haemophilus influenzae R2866]
          Length = 485

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W+  
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWQRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + + V        L    V   + +        A R  I  
Sbjct: 232 SASHKVRFIAINFEGIVGEILEKVDNGQMGVVLKRMMVRAASKV--------AQRFNIEA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I     A+         V  PL+   K +   +A++IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDEASGAL---------VLRPLITHDKEQIIAMAKEIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|262306103|gb|ACY45644.1| gln amidotransferase [Scutigerella sp. 'Scu3']
          Length = 197

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKI 60
             +      L+L SGG DS+ C +      + D+V  L  + G   K E +      +KI
Sbjct: 38  RSMVGENKVLMLVSGGVDSTVCAALLHKALKEDQVIALHINNGFMRKGETQQVETSLRKI 97

Query: 61  VELMPKWKDS 70
              +     S
Sbjct: 98  GLKLKVVNAS 107


>gi|148238384|ref|YP_001223771.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Synechococcus sp. WH 7803]
 gi|147846923|emb|CAK22474.1| GMP synthase (glutamine-hydrolyzing) [Synechococcus sp. WH 7803]
          Length = 539

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 49/190 (25%), Gaps = 19/190 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST          D++  +  D G   K E E                
Sbjct: 236 KRVLLALSGGVDSSTLAFLLKKAIGDQLTCMFIDQGFMRKGEPEF--------------L 281

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D       + +  +                +           R              L 
Sbjct: 282 MDFFDRKFNIHVEYINARQRFLDKLKDITDPEQKRKIIGTEFIRVFEEESRRLGPFDYLA 341

Query: 128 ITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              +   V E+  +       +     I++      L  +    +  PL  L K E  K+
Sbjct: 342 QGTLYPDVIESAGTDVDPKTGERVAVKIKSHHNVGGLPKDLQFKLVEPLRKLFKDEVRKV 401

Query: 184 AQDIGGQDLV 193
            + +G  + +
Sbjct: 402 GRSLGLPEEI 411


>gi|88798697|ref|ZP_01114280.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Reinekea sp. MED297]
 gi|88778460|gb|EAR09652.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Reinekea sp. MED297]
          Length = 364

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 39/148 (26%), Gaps = 5/148 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS   +  L++  +VE L          +     C  K+ +       D
Sbjct: 8   KVIVGMSGGVDSSVTAALLLEQGYQVEGLFMKNW---DEDDGTEYCTAKEDLADAQAVAD 64

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG  H+       +   +     +             +  R  I        A  LG  
Sbjct: 65  RLG-IHLHKANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFKAFLEYALTLGAD 122

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETA 157
            I  G      +     R          
Sbjct: 123 KIATGHYARTDTMNGKGRLLRGNDHNKD 150


>gi|118443777|ref|YP_878930.1| GMP synthase [Clostridium novyi NT]
 gi|226738427|sp|A0Q2S8|GUAA_CLONN RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|118134233|gb|ABK61277.1| GMP synthase [Clostridium novyi NT]
          Length = 512

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 61/187 (32%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS            ++  +  D+G   K E +    + KK  + M   
Sbjct: 218 KKVLCALSGGVDSSVAAVLVHKAIGKQLTCVFVDHGLLRKDEGDQVEAIFKKQFD-MNLI 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           + + GE        LG +   S  +     I +               +      A +LG
Sbjct: 277 RVNAGE------RFLGKLKGVSDPETKRKIIGEEF-------------IRVFEEEAGKLG 317

Query: 128 -ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  +V G    D          TI++      L  +   ++  PL  L K E   + ++
Sbjct: 318 QIDFLVQGTIYPDVVESGTNTSATIKSHHNVGGLPEDMQFSLIEPLRELFKDEVRAVGEE 377

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 378 LGIPHKL 384


>gi|293977825|ref|YP_003543255.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Sulcia muelleri DMIN]
 gi|292667756|gb|ADE35391.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Sulcia muelleri DMIN]
          Length = 380

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 43/183 (23%), Gaps = 7/183 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS        +   V  +   Y   +         +   +V    K  
Sbjct: 4   KRVIVGMSGGVDSSVAALLLKKQGYDVIGIFMKYYNFDNKCPWREDSIDAMLVSQSLKIP 63

Query: 69  DSLGED----HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             + +       L +  L        T N  +          F+     +   F AT  Y
Sbjct: 64  FYIIDITKNYKNLIIDYLYKEYKKGYTPNPDIICNSKIKFKFFLEKSIFLKSDFIATGHY 123

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                   I                          L          PL WL K E  ++A
Sbjct: 124 VRKKE---INENGKISYKIISGIDSNKDQSYFLCKLNKVQIKKSIFPLGWLNKKEVREIA 180

Query: 185 QDI 187
              
Sbjct: 181 NKY 183


>gi|253574914|ref|ZP_04852254.1| tRNA methyl transferase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251845960|gb|EES73968.1| tRNA methyl transferase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 378

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/196 (11%), Positives = 45/196 (22%), Gaps = 12/196 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKK 59
           M          ++  SGG DSS        +   V  +   ++   ++          + 
Sbjct: 1   MMAKPNSETRVVVGMSGGVDSSVTALLLKQQGYDVIGIFMKNWDDTDEFGYCTAEADAED 60

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +  +  +            +              +    +        +  R  I     
Sbjct: 61  VRRVCEQIDIPYYT-----VNFEKQYYDKVFAYFLEEYKRGRTPNPDVMCNRE-IKFGEF 114

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMW 174
              A  LG   +  G            +                 L  E       P+  
Sbjct: 115 LNKALDLGADYVATGHYARVVEENKTYKLLRGVDSNKDQTYFLNALNQEQLSKAMFPIGH 174

Query: 175 LKKYETWKLAQDIGGQ 190
           L K E  ++A++ G  
Sbjct: 175 LPKPEVRRIAEEAGLY 190


>gi|225016206|ref|ZP_03705398.1| hypothetical protein CLOSTMETH_00109 [Clostridium methylpentosum
           DSM 5476]
 gi|224951028|gb|EEG32237.1| hypothetical protein CLOSTMETH_00109 [Clostridium methylpentosum
           DSM 5476]
          Length = 352

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 51/182 (28%), Gaps = 11/182 (6%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWKDSLG 72
            SGG DSS   +  +++   V   +F   +      + E   C    I +          
Sbjct: 4   MSGGVDSSVAAALLIEQGYEVVGATFRLWKPEDDLFDSEATCCSLDDINDAREVCHQLGI 63

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
             ++L    L      ++ +N   + Q    PN  +     I   +    A  LG   + 
Sbjct: 64  PHYVLN---LKREFKEAVVQNFVEEYQAGRTPNPCIVCNQKIKFDYFYQKAAALGFDYVA 120

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLKKYETWKLAQD 186
            G                  A            +       +  PL    K +  +LA+ 
Sbjct: 121 TGHYARIEQNEQGEFQLKTAAYAQKDQSYFLYGIPYPNLGHILFPLGGYTKPQVRELAEK 180

Query: 187 IG 188
            G
Sbjct: 181 YG 182


>gi|323345389|ref|ZP_08085612.1| GMP synthase [Prevotella oralis ATCC 33269]
 gi|323093503|gb|EFZ36081.1| GMP synthase [Prevotella oralis ATCC 33269]
          Length = 514

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 58/188 (30%), Gaps = 21/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS C +         +  +  D+G   K E    +   + +      
Sbjct: 213 NDRVILGLSGGVDSSVCATLLNKAIGSNLTCIFVDHGMLRKNEFRKVMDAYQGLG----- 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   H++ +                +    +      + GR+ + +  A       
Sbjct: 268 -------LHVIGIDASKKFFD-------DLAGVTDPEQKRKIIGRDFVEVFNAEAKKIT- 312

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G    D          TI++      L  E  + +  PL WL K E  ++ ++
Sbjct: 313 DAKWLAQGTIYPDRIESLSITGMTIKSHHNVGGLPKEMKLQLCEPLQWLFKDEVRRVGRE 372

Query: 187 IGGQDLVN 194
           +G  + + 
Sbjct: 373 LGMPERLI 380


>gi|268589250|ref|ZP_06123471.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Providencia rettgeri DSM 1131]
 gi|291315435|gb|EFE55888.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Providencia rettgeri DSM 1131]
          Length = 366

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 52/188 (27%), Gaps = 9/188 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +  +V  L        + + +   C     +    
Sbjct: 3   NSQKKVIVGMSGGVDSSVSAYLLQQQGYQVAGLFMKNW---EEDDDTEYCSAAADLADAQ 59

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG + +  +    +   +     +             +  + I F  F    A  
Sbjct: 60  AVCDKLGIE-LHTINFAAEYWDNVFEHFLTEYKAGRTPNPDILCNKEIKFKAFLEFAAED 118

Query: 126 LGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           LG   I  G            +                 L  E       P+  L+K E 
Sbjct: 119 LGADYIATGHYVRRRDIDGKSQLLRGLDGNKDQSYFLYTLSHEQVAKSLFPVGELEKPEV 178

Query: 181 WKLAQDIG 188
            ++A++IG
Sbjct: 179 RRIAEEIG 186


>gi|262306003|gb|ACY45594.1| gln amidotransferase [Achelia echinata]
          Length = 197

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 2/63 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +   L+L SGG DS+ C +      + ++V  +  D G   K E +      +K+   + 
Sbjct: 43  SSKVLVLVSGGVDSTVCAALLHKALQPEQVIAVHIDNGFMRKEESKQVEESLRKLGLHLL 102

Query: 66  KWK 68
              
Sbjct: 103 VVN 105


>gi|253699615|ref|YP_003020804.1| tRNA-specific 2-thiouridylase MnmA [Geobacter sp. M21]
 gi|251774465|gb|ACT17046.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Geobacter sp. M21]
          Length = 355

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 55/214 (25%), Gaps = 14/214 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC---RLCVR 57
           M+   K    A+ + SGG DSST  +   ++   V  ++     R+  + +       V 
Sbjct: 1   MSANYKGRKVAVAM-SGGVDSSTVAALLKEQGAEVIGINMKLFARDGEDPQAKGDAQIVA 59

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           + +               ++                           N +V    ++   
Sbjct: 60  EYLGIEFHLVHLEEEFSRLIMEDFRAQYLGGETPNP-------CVRCNRYVKFGLLLDKA 112

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL-K 176
                 Y      +     +                      L  +    V  PL  +  
Sbjct: 113 LELGAEYLATGHYVRTSRDDGGSYHLLKAAFLAKDQSYFLYTLTQKQLSHVVFPLGDMPS 172

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDK 210
           K E  +LA+  G         +E   C++   D 
Sbjct: 173 KDEVRRLAEKFGLPVAQKSDSQEI--CFVPGDDY 204


>gi|329894882|ref|ZP_08270681.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [gamma
           proteobacterium IMCC3088]
 gi|328922611|gb|EGG29946.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [gamma
           proteobacterium IMCC3088]
          Length = 361

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 47/190 (24%), Gaps = 11/190 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      ++  SGG DSS      +++   VE L          + +        + +  
Sbjct: 1   MNPKQKVIVGLSGGVDSSVAALCLIEQGFDVEALFMKNW-----DEDDDTEYCTAMQDFA 55

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                +     +L  A         + +    + +    PN  +     I        A 
Sbjct: 56  DASAVAAALGIVLHGANFAREYWDRVFEYFLAEYRAGRTPNPDILCNKEIKFKAFLDYAL 115

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPLMWLKKY 178
            LG   I  G                  A            V          PL  + K 
Sbjct: 116 NLGADFIATGHYARTGLDNAGLTTLQKGADPNKDQSYFLHQVPHQALAKTLFPLGDMHKT 175

Query: 179 ETWKLAQDIG 188
           E  + A+  G
Sbjct: 176 EVRERAKAAG 185


>gi|308186449|ref|YP_003930580.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Pantoea vagans C9-1]
 gi|308056959|gb|ADO09131.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Pantoea vagans C9-1]
          Length = 370

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 52/200 (26%), Gaps = 27/200 (13%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC-------- 52
           M+D        ++  SGG DSS        +  +VE L     + +  E  C        
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAADDLAD 58

Query: 53  RLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN 112
              V  K+   + K                 +   +     +             +  + 
Sbjct: 59  AQAVCDKLGMKLHKVN------------FAAEYWDNVFEHFLEEYKAGRTPNPDILCNKE 106

Query: 113 IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVT 167
           I F  F    A  LG   I  G            +                 L  E    
Sbjct: 107 IKFKAFLEFAAEDLGADFIATGHYVRRKDVDGQSQLLRGLDGNKDQSYFLYTLSHEQIAQ 166

Query: 168 VHTPLMWLKKYETWKLAQDI 187
              P+  L+K E  ++A+ +
Sbjct: 167 SLFPVGELEKPEVRRIAEQL 186


>gi|301065024|ref|ZP_07205369.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [delta
           proteobacterium NaphS2]
 gi|300440873|gb|EFK05293.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [delta
           proteobacterium NaphS2]
          Length = 363

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 51/189 (26%), Gaps = 11/189 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DSS   ++      RV  L F       V        +K+I +     + 
Sbjct: 15  KILVALSGGVDSSMAAAFLKGAGHRVHGLHF-------VLPSPADISQKRISKAKEISEH 67

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA--TLAYRLG 127
                    L  + +    +   +  +K    N      P      +           + 
Sbjct: 68  LQIPLTTFDLRPIFETELIAPFVDAYLKGLTPNPCVRCNPLIKFEQMYRHLKTFQFDFMA 127

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYETWKLAQ 185
             + V    +   S     R       ++     LG         PL  + K E    A+
Sbjct: 128 TGHYVRIRRKGKNSPVTLWRGKDRLKDQSYFLHRLGQRQLAKTIFPLGHMTKTEIRFQAR 187

Query: 186 DIGGQDLVN 194
            +G     +
Sbjct: 188 KMGIPSSED 196


>gi|327393518|dbj|BAK10940.1| tRNA 5-methylaminomethyl-2- thiouridylate-methyltransferase TrmU
           [Pantoea ananatis AJ13355]
          Length = 370

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 53/200 (26%), Gaps = 27/200 (13%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC-------- 52
           M+D        ++  SGG DSS        +  +VE L     + +  E  C        
Sbjct: 1   MSD--NCQKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAADDLAD 58

Query: 53  RLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN 112
              V  K+   + K                 +   +     +             +  + 
Sbjct: 59  AQAVCDKLGIKLHKVN------------FAAEYWDNVFEHFLEEYKAGRTPNPDILCNKE 106

Query: 113 IIFLVFAATLAYRLGITNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
           I F  F    A  LG   I     V        S                  L  E    
Sbjct: 107 IKFKAFLEFAAEDLGADFIATGHYVRRQDSDGRSHLLRGGDGNKDQSYFLYTLSHEQIAQ 166

Query: 168 VHTPLMWLKKYETWKLAQDI 187
              P+  L+K E  ++A+++
Sbjct: 167 SLFPVGELEKPEVRRIAEEL 186


>gi|323340632|ref|ZP_08080884.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus ruminis ATCC 25644]
 gi|323091755|gb|EFZ34375.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus ruminis ATCC 25644]
          Length = 375

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/185 (11%), Positives = 47/185 (25%), Gaps = 11/185 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS C      +   V  +        + +      V +   ++     +
Sbjct: 8   RVVVGMSGGVDSSVCAYLLKRQGYDVVGVFMKNWD--EKKDSGVCTVTEDYQDVAKVANE 65

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                + +      +      T  +             +     +        A  L   
Sbjct: 66  IGIPYYSVN--FEKEYWDGVFTYFLDEYRHGRTPNPDVMC-NKEVKFKAFLDYAMELDAD 122

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMWLKKYETWKL 183
            I +G             H    A +          L  +       P+  ++K E  ++
Sbjct: 123 YIAMGHYAQIKRDDDGTVHLMRGADQNKDQTYFLSQLSGKQLEKAMFPIGGMQKSEVREI 182

Query: 184 AQDIG 188
           A+  G
Sbjct: 183 AKKAG 187


>gi|307243659|ref|ZP_07525800.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Peptostreptococcus stomatis DSM 17678]
 gi|306492969|gb|EFM64981.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Peptostreptococcus stomatis DSM 17678]
          Length = 350

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 43/184 (23%), Gaps = 10/184 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              LL  SGG DSS            V   +           +  +   + +   +    
Sbjct: 2   KRVLLGMSGGVDSSVAAFLLQKEGYEVVGATMALWDFKDGNKDTSIEDARVVCNKLK--- 58

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA----Y 124
               + H+L               +     +  N             L   A        
Sbjct: 59  ---IDHHVLDFREDFKDLVVDNFIDEYFAGKTPNPCVFCNKTIKFGLLFDKARELGCDYV 115

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G   +V    ++          D+        NL  E       P+    K     +A
Sbjct: 116 ATGHYALVDFNEKSGKYEIKKASSDSKDQTYVLYNLNQEKLARTLFPIGKYDKDTIRDMA 175

Query: 185 QDIG 188
           ++IG
Sbjct: 176 KEIG 179


>gi|53804157|ref|YP_114223.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylococcus capsulatus str. Bath]
 gi|81681831|sp|Q607H5|MNMA_METCA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|53757918|gb|AAU92209.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylococcus capsulatus str. Bath]
          Length = 371

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 37/132 (28%), Gaps = 5/132 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             P  ++  SGG DSS      L +  RV  L     + +     C     +   +    
Sbjct: 1   MKPHVVVGMSGGVDSSVTALLLLRQGYRVSGLFMKNWEEDDGTEYC--TAAQDFADAKQV 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +    E H +            + +    + +    PN  +     I        A  L
Sbjct: 59  CERLGVELHTVN---FAAEYWDEVFEVFLSEYRAGRTPNPDILCNKQIKFRAFLDYAEDL 115

Query: 127 GITNIVIGVCET 138
           G   I +G    
Sbjct: 116 GADLIAMGHYAR 127


>gi|254786948|ref|YP_003074377.1| argininosuccinate synthase [Teredinibacter turnerae T7901]
 gi|237684351|gb|ACR11615.1| argininosuccinate synthase [Teredinibacter turnerae T7901]
          Length = 411

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 49/162 (30%), Gaps = 9/162 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKK 59
           M+         +L +SGG D+S  + W  + +   V T + + GQ  +VE          
Sbjct: 1   MSAENSSIKKVVLAYSGGLDTSVIVKWLQETYQCEVVTFTANIGQGEEVEPARAKAQAMG 60

Query: 60  IVELM-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
           + E+     ++    D++ P+     I         ++           +  R I     
Sbjct: 61  VKEIYIEDLREEFVRDYVFPMFRANAIYEGEYLLGTSIARP-------LIAKRMIEIANE 113

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
               A   G T         +   Y       + A     NL
Sbjct: 114 TGADAISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWNL 155


>gi|224419182|ref|ZP_03657188.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter canadensis MIT
           98-5491]
          Length = 190

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 47/177 (26%), Gaps = 10/177 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              LLL SGG DSS C      +   V  +      + +        ++K    L     
Sbjct: 2   KKVLLLMSGGVDSSYCAYLLQKQGYSVYGIYLKLHDKEEKHDYYTRNIQKCAESLN---- 57

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                  I+    L   S      +     +    PN        +    A  LA  LG 
Sbjct: 58  ---IPYQIVDERELFKKSVYDYFVDS---YKKGLTPNPCAMCNPNVKFNIAFKLAKDLGC 111

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
             +  G      +G      DT +     +       +      +  KK E  K   
Sbjct: 112 EFVATGHYAQIKNGRIAQAVDTHKDQSYFLFGLKPEWIEKIIFPLGDKKKEEIKPIA 168


>gi|86132339|ref|ZP_01050934.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Dokdonia donghaensis MED134]
 gi|85817258|gb|EAQ38441.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Dokdonia donghaensis MED134]
          Length = 397

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 37/135 (27%), Gaps = 3/135 (2%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            + ++  SGG DSS       ++   V  L       + V +           + M   +
Sbjct: 2   KTVVVGLSGGVDSSVTAYLLKEQGYNVIGLFMKNWHDDSVTISDECPWLDDSNDAMLVAE 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   +    L +     +   +  + +    PN  V     I       +A  LG 
Sbjct: 62  KLGIPFQTVD---LSEQYQERIVDYMFREYEMGRTPNPDVLCNREIKFDVFMKIALSLGA 118

Query: 129 TNIVIGVCETDYSGY 143
             +  G      S  
Sbjct: 119 DYVATGHYCQKSSIE 133


>gi|297571855|ref|YP_003697629.1| GMP synthase, large subunit [Arcanobacterium haemolyticum DSM
           20595]
 gi|296932202|gb|ADH93010.1| GMP synthase, large subunit [Arcanobacterium haemolyticum DSM
           20595]
          Length = 521

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 53/187 (28%), Gaps = 14/187 (7%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             A+   SGG DSS   +       D++  +  D+G   K E      V +   E     
Sbjct: 218 KHAICALSGGVDSSVAAALVHRAIGDQLTCVFVDHGLLRKGE---AEQVIEDYAEARGM- 273

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    +      +   ++L      + +   +   F+       +         + 
Sbjct: 274 --------KIVAVDESERFLTALAGVRDPEEKRKIIGREFIRSFEAAQIKLMEEAPEGVE 325

Query: 128 -ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +               I++      L  +   ++  PL  L K E   +  +
Sbjct: 326 FAFLVQGTLYPDVVESGGGDGTANIKSHHNVGGLPDDIEFSLVEPLRDLFKDEVRAIGLE 385

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 386 LGLSEKL 392


>gi|29348763|ref|NP_812266.1| tRNA-specific 2-thiouridylase MnmA [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|81443497|sp|Q8A2F1|MNMA2_BACTN RecName: Full=tRNA-specific 2-thiouridylase mnmA 2
 gi|29340669|gb|AAO78460.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides thetaiotaomicron VPI-5482]
          Length = 370

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 53/190 (27%), Gaps = 10/190 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIV 61
           ++++    LL  SGG DSS      L+    V  ++F + + N      E    + +++ 
Sbjct: 1   MMEENKRVLLGMSGGTDSSVAAMRLLEAGYEVTGVTFRFYELNDSTEYLEDARHLAERLG 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                +         +    + +      T        +           + + + + AT
Sbjct: 61  IRHITYDAREIFRKQIIEYFVHEYMVG-HTPVPCTLCNNYLKWPLLSKIADEMGIFYIAT 119

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
             Y   +                D         +  +         +  P+  + K E  
Sbjct: 120 GHYVRKVKVDDTCYITYAADSDKDQTFFLWGLKQDILR-------RMLLPMGDITKVEAR 172

Query: 182 KLAQDIGGQD 191
             A + G Q 
Sbjct: 173 AFAAERGFQK 182


>gi|11498169|ref|NP_069395.1| hypothetical protein AF0559 [Archaeoglobus fulgidus DSM 4304]
 gi|2650065|gb|AAB90680.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 265

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 52/188 (27%), Gaps = 34/188 (18%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M   ++     ++ FSGG DSST  +   D    V  ++    +    E++    +  +I
Sbjct: 12  MRGFLEGFKGVVIAFSGGVDSSTLAAVCKDAGLDVLAVTVVSQKSPSREIKDAAKIAMEI 71

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                       +   + + IL                +     +          L    
Sbjct: 72  G----------VKHEFVNMDIL--------------TPEFRENTSERCYFCKKKVLSSLV 107

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           +LA   G   +  G   +D  G+                      V        + K E 
Sbjct: 108 SLAEERGYDAVFEGTNASDLEGHRPGYKAVKE----------MHGVYSPWAEFGITKKEI 157

Query: 181 WKLAQDIG 188
             +A+ +G
Sbjct: 158 RMVAKSMG 165


>gi|315652097|ref|ZP_07905095.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Eubacterium saburreum DSM 3986]
 gi|315485589|gb|EFU75973.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Eubacterium saburreum DSM 3986]
          Length = 363

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 51/186 (27%), Gaps = 6/186 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL---CVRKKIVEL 63
           +    ++  SGG DSS       +    V  ++    Q    E        C    + + 
Sbjct: 2   EKKKVVVGMSGGVDSSVAAYLLKEAGYDVTGVTMQIWQSEDEEDMSGSGGCCGLSAVDDA 61

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
               +D     +++               N  ++ +  N             L+  + + 
Sbjct: 62  RRVARDIGIPYYVMNFRDEFKDKVIDYFVNEYVQARTPNPCIACNRYVKWESLLERSMML 121

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM---WLKKYET 180
               I        E   +G    R     A +    L   +   +   LM     +K E 
Sbjct: 122 GADYIATGHYARIEKLENGRYALRTSKTSAKDQTYALYNLTQDQLSRTLMPVGDYEKDEI 181

Query: 181 WKLAQD 186
            ++A+ 
Sbjct: 182 REIAKK 187


>gi|261339434|ref|ZP_05967292.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterobacter cancerogenus ATCC 35316]
 gi|288318240|gb|EFC57178.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterobacter cancerogenus ATCC 35316]
          Length = 370

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 52/192 (27%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +VE L     + +  E  C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYKVEGLFMKNWEEDDGEEYC--TAAADL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +             +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G            +                 L  E       P+  L
Sbjct: 115 FAAEDLGADYIATGHYVRRADVNGKSQLLRGLDGNKDQSYFLYTLSHEQIAQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K E  K+A+ +
Sbjct: 175 EKPEVRKIAEAL 186


>gi|114799235|ref|YP_759017.1| hypothetical protein HNE_0287 [Hyphomonas neptunium ATCC 15444]
 gi|114739409|gb|ABI77534.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
          Length = 456

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 65/230 (28%), Gaps = 25/230 (10%)

Query: 8   APSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            P  ++ +S G DS       A  R   +   +   G   K     R    + +      
Sbjct: 141 TPPVVIPYSNGLDSFAVARLHAQPRQHIIRVSTGRVGDTEKKVSHARTASTRWVS----- 195

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     +P+++ G           +       +  T         +V   +     
Sbjct: 196 ----------MPISLPGAGVRLPEQSYRSRGFLFGAVAATAAGIMKGAEIVVPESGQGTF 245

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G    VIG    D    P        A+   ++   ES +    P +W  K ET    Q 
Sbjct: 246 GPALTVIGHEHPDVRMSPIFTS----ALGRFVSRIFESPIRFVHPRVWSTKGETLAALQI 301

Query: 187 IGGQDLVNLILEESHTCYLGKRDK-RYEWGYGCNSCPACYLRQKGWMEFK 235
                 ++   E + +C    R K +      C  C  C LR++      
Sbjct: 302 ----AQLSEGWEVTVSCSRSSRRKIQGSVAKHCGVCANCLLRRQSLQVAG 347


>gi|284044473|ref|YP_003394813.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Conexibacter woesei DSM 14684]
 gi|283948694|gb|ADB51438.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Conexibacter woesei DSM 14684]
          Length = 519

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 37/135 (27%), Gaps = 3/135 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DS+     A      V  ++ +     + + E   C  + +         
Sbjct: 144 RTLVAMSGGVDSAVAALLAARESGDVVAVTLELWADEQNDGERSCCSAQAVRFARALAHR 203

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                  L    L +   + +             PN  V     + L     LA RLG  
Sbjct: 204 MGLPHLTLD---LREEFSAGVVTPFLDDHAAGLTPNPCVRCNGHVRLDAMLELADRLGAA 260

Query: 130 NIVIGVCETDYSGYP 144
            +  G         P
Sbjct: 261 TLATGHYARVEPAEP 275


>gi|262306101|gb|ACY45643.1| gln amidotransferase [Scutigera coleoptrata]
          Length = 197

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 24/65 (36%), Gaps = 2/65 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               L+L SGG DS+ C +      + D+V  +  D G   K E         KI   + 
Sbjct: 43  TNKVLMLVSGGVDSTVCAALLHKALKDDQVIAVHIDNGFMRKNESRQVEQSLSKIGLKLK 102

Query: 66  KWKDS 70
               S
Sbjct: 103 VVNAS 107


>gi|291613490|ref|YP_003523647.1| argininosuccinate synthase [Sideroxydans lithotrophicus ES-1]
 gi|291583602|gb|ADE11260.1| argininosuccinate synthase [Sideroxydans lithotrophicus ES-1]
          Length = 408

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 53/157 (33%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +   A+L +SGG D+S  L W  D +   V T + D GQ  ++E   R    K  ++ 
Sbjct: 1   MSEIKKAVLAYSGGLDTSVILKWLQDTYQCEVVTFTADLGQGEELEP-ARQKALKFGIKP 59

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + D L E+ +            + T      +   ++    +  R I  +      A
Sbjct: 60  ENIFIDDLREEFVRDFVF---PMFRANTIYEGEYLLGTSIARPLIAKRLIDIVNKTGAQA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         +   Y       I A     +L
Sbjct: 117 ISHGATGKGNDQVRFELGAYALKPGIKIIAPWREWDL 153


>gi|220905069|ref|YP_002480381.1| GMP synthase [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
 gi|219869368|gb|ACL49703.1| GMP synthase, large subunit [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 511

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 50/186 (26%), Gaps = 18/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DS+            R+  +  D G     E +              + 
Sbjct: 215 KHVVCALSGGIDSTVVAVLLHRAIGKRLHCIFVDNGLLRLGEGD--------------EV 260

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              L E   L L  +          +    ++D       +    I      A    ++ 
Sbjct: 261 VSYLREHFDLNLNFVQAQE---RFLSKLKGVEDPEKKRKIIGHTFIEIFDEEANKLDQVD 317

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    +   S         I++      L     + +  PL  L K E  K+A ++
Sbjct: 318 FLAQGTLYPDVIESISHKGPSAVIKSHHNVGGLPDTMKLKLIEPLRELFKDEVRKVAAEL 377

Query: 188 GGQDLV 193
           G  D +
Sbjct: 378 GMPDSI 383


>gi|78043170|ref|YP_361010.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Carboxydothermus hydrogenoformans Z-2901]
 gi|123575599|sp|Q3AA24|MNMA_CARHZ RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|77995285|gb|ABB14184.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Carboxydothermus hydrogenoformans Z-2901]
          Length = 365

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 48/189 (25%), Gaps = 11/189 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIVELM 64
               L+  SGG DSS   +  L++   V  ++    D       E     C    + +  
Sbjct: 6   RKKVLVAMSGGVDSSVTAALLLEQGYEVVGVTMQIWDPKIEVIGEEYVGCCSIYAVNDAR 65

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA---- 120
                     ++L    L +           ++ +  N             L+  A    
Sbjct: 66  RVADRLGIPYYVLNFRELFERKVIDYFTEEYLRGRTPNPCIACNRYIKFDALLKKALSLG 125

Query: 121 --TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
              +A       +               R           NL  +    +  PL    K 
Sbjct: 126 MDYMATGHYARVVYKDDIGKYGLFRGVDRKK--DQTYVLYNLTQDMLRRLLLPLGEYTKE 183

Query: 179 ETWKLAQDI 187
           +  +LA+  
Sbjct: 184 QVRELARKY 192


>gi|297537830|ref|YP_003673599.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylotenera sp. 301]
 gi|297257177|gb|ADI29022.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylotenera sp. 301]
          Length = 369

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/196 (12%), Positives = 49/196 (25%), Gaps = 13/196 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN         ++  SGG DSS        +   V  L     + +  +  C     + +
Sbjct: 1   MNLNKSSKKHVVVGLSGGVDSSVTALLLKQQGYEVTGLFMKNWEDDDTDEYCSSK--QDL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           ++ +        +   +            +  N   + +    PN  +     I      
Sbjct: 59  IDAVSVADKIGID---IEAVNFSKEYKDRVFDNFLSEYKAGRTPNPDILCNAEIKFKAFL 115

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK---- 176
             A  LG   I  G                +   +            ++   +       
Sbjct: 116 DHAMGLGADVIATGHYAQVRENPLKPGLFQLMKADDGSKDQSYFLHRLNQAQLSKTLFPL 175

Query: 177 ----KYETWKLAQDIG 188
               K E  ++A+  G
Sbjct: 176 GQMLKREVREIARGAG 191


>gi|311740584|ref|ZP_07714411.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311304104|gb|EFQ80180.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 365

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 50/187 (26%), Gaps = 5/187 (2%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK-KIVEL 63
           +      L+  SGG DSS   + A++    V  +     +  +   E        +    
Sbjct: 1   MGSTMRVLVAMSGGVDSSVAAARAVEAGHEVIGVHLALHKDAQQTREKARGCCSLEDSAD 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
             +  D LG    +      +     +  +          PN  +     I         
Sbjct: 61  ARRICDKLGIPFYVW--DFSEEFKEEVITDFVDSYARGETPNPCLRCNEKIKFRALLQKG 118

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYETW 181
             LG   +  G   T        R    +  ++ +   +  E       P+    K +  
Sbjct: 119 MALGFDAVATGHYATIDKDGYMRRSLDEKKDQSYVLGVISAEELEHCFFPIGDTPKPQIR 178

Query: 182 KLAQDIG 188
           + A   G
Sbjct: 179 EEAAAHG 185


>gi|46202527|ref|ZP_00053063.2| COG0482: Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase, contains the PP-loop ATPase domain
           [Magnetospirillum magnetotacticum MS-1]
          Length = 373

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 39/140 (27%), Gaps = 9/140 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE------CRLCVRKKIVEL 63
             ++  SGG DSS   +   ++   V  ++          +E         C  K I + 
Sbjct: 14  RVVVAMSGGVDSSAVAALLKEQGYDVVGVTLQLYDLATSGIEPGACRPNTCCAGKDIHDA 73

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      ++L      +     + +  A    +   P   +     +       +A
Sbjct: 74  RAVADALGIPHYVLD---FEETFRRDVVERFAQTYLEAKTPVPCIECNRTVKFRDLLGVA 130

Query: 124 YRLGITNIVIGVCETDYSGY 143
             LG   +  G      SG 
Sbjct: 131 KDLGADALATGHYVRRRSGP 150


>gi|330998316|ref|ZP_08322141.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Paraprevotella xylaniphila YIT 11841]
 gi|329568705|gb|EGG50506.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Paraprevotella xylaniphila YIT 11841]
          Length = 378

 Score = 53.8 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 49/192 (25%), Gaps = 7/192 (3%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  +    L+  SGG DSS       D    V  ++       +   +        I + 
Sbjct: 1   MEHERKKVLVGMSGGIDSSAVCLMLQDEGYEVVGVTMRVWDLARQFTDAGQEYPDFIQDA 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      ++                +  +  +  N      P      LV     A
Sbjct: 61  RALAARLGIVHYVADERTAFKDIVVRDFVDEYLAGRTPNPCVMCNPAFKFRVLVE---WA 117

Query: 124 YRLGITNI----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            +LG   I     + V E D      C  D  +     +    +  ++     +   + E
Sbjct: 118 DKLGCDYIATGHYVRVKEEDGHYALYCGVDGKKDQSYFLWRLGQDVLSRCIFPLGAMRKE 177

Query: 180 TWKLAQDIGGQD 191
             +      G +
Sbjct: 178 DVRGYLARKGFE 189


>gi|313681460|ref|YP_004059198.1| gmp synthase (glutamine-hydrolyzing) [Sulfuricurvum kujiense DSM
           16994]
 gi|313154320|gb|ADR32998.1| GMP synthase (glutamine-hydrolyzing) [Sulfuricurvum kujiense DSM
           16994]
          Length = 514

 Score = 53.4 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 55/185 (29%), Gaps = 18/185 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS   +   +   D++  +  D G   K E E    + K    +  K  
Sbjct: 219 KVLCALSGGVDSSVVAALLYEAIGDQLIPVFVDNGLLRKGERESVENIFK----VHLKVP 274

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             + +   + L  L  ++     + +                  I FL         +  
Sbjct: 275 LVVADASEIFLGKLAGVTDPETKRKIIGHTFIEVFEAEAKKHDGIKFLAQGTLYPDVIE- 333

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                       S   +    TI++      L       +  PL  L K E  KL  ++G
Sbjct: 334 ------------SVSVNGPSVTIKSHHNVGGLPDWMDFELIEPLRDLFKDEVRKLGLELG 381

Query: 189 GQDLV 193
             D +
Sbjct: 382 LPDSL 386


>gi|311279962|ref|YP_003942193.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterobacter cloacae SCF1]
 gi|308749157|gb|ADO48909.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterobacter cloacae SCF1]
          Length = 369

 Score = 53.4 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 53/192 (27%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +VE L     + +  E  C       +
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYKVEGLFMKNWEEDDGEEYC--TAAADL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +             +  + I F  F  
Sbjct: 57  ADAQAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G            +                 L  E       P+  L
Sbjct: 115 FAAEDLGADYIATGHYVRRADVNGKSQLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K +  K+A+++
Sbjct: 175 EKPQVRKIAEEL 186


>gi|289741327|gb|ADD19411.1| GMP synthase [Glossina morsitans morsitans]
          Length = 683

 Score = 53.4 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 55/194 (28%), Gaps = 8/194 (4%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIV---E 62
               LLL SGG DS+ C +         ++  +  D G   K E E      + I     
Sbjct: 228 KNKVLLLVSGGVDSTVCAALLRHALHPSQIIAVHVDNGFMRKDESEKVEKSLRDIGIDLI 287

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-NTFVPGRNIIFLVFAAT 121
           +  +    L     +       I  + +        +   +  + FV     I       
Sbjct: 288 VRKEVYTFLKGTTQIKRPGQFSIVETPMLCQTINPEEKRKIIGDIFVKITKDIVEDMKLK 347

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA--INLGMESHVTVHTPLMWLKKYE 179
               L     +        S       +TI+       +   + +   V  PL    K E
Sbjct: 348 PEEVLLAQGTLRPDLIESASNLVSPNAETIKTHHNDTELIRELRNAGRVVEPLSDFHKDE 407

Query: 180 TWKLAQDIGGQDLV 193
             +L  D+G    +
Sbjct: 408 VRELGHDLGIPPEL 421


>gi|262376077|ref|ZP_06069308.1| tRNA methyl transferase [Acinetobacter lwoffii SH145]
 gi|262309171|gb|EEY90303.1| tRNA methyl transferase [Acinetobacter lwoffii SH145]
          Length = 379

 Score = 53.4 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 46/166 (27%), Gaps = 5/166 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS   +  L +  +VE L     + +     C     + + +    
Sbjct: 1   MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGLFMKNWEEDDGTEYC--TAMEDLADAQAV 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H    A         + ++   +      PN  +     I        A  L
Sbjct: 59  CDKIGIKLHT---ANFAMEYWDRVFEHFLAEYAAGRTPNPDILCNKEIKFRAFLDHAVNL 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
           G   I  G          + R +    +   ++   +    +H   
Sbjct: 116 GADFIATGHYCRRGETMTNSRGEEYAPLLRGVDNNKDQTYFLHAVH 161


>gi|257060381|ref|YP_003138269.1| tRNA-specific 2-thiouridylase MnmA [Cyanothece sp. PCC 8802]
 gi|256590547|gb|ACV01434.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Cyanothece sp. PCC 8802]
          Length = 349

 Score = 53.4 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 44/157 (28%), Gaps = 8/157 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS   +    +   V  L+        +      C  + +V+     +
Sbjct: 2   NKVVVGLSGGVDSSVAAAVLHHQGYEVIGLTL------WLMKGKGQCCSEGMVDAAFICE 55

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 HI+    +   +  +    V+               R + F          LG 
Sbjct: 56  QLGIPHHIVDSRDVFQANIVNYL--VSGYEAGITPLPCSQCNRAVKFGPMLDYARQELGC 113

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH 165
             I  G            R+  +RAI+   +     +
Sbjct: 114 DRIATGHYARIRYDEISQRYQLLRAIDRNKDQSYFLY 150


>gi|313147999|ref|ZP_07810192.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides fragilis 3_1_12]
 gi|313136766|gb|EFR54126.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides fragilis 3_1_12]
          Length = 364

 Score = 53.4 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 46/190 (24%), Gaps = 16/190 (8%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           ++++    LL  SGG DSS      L+    V  ++F                 + + + 
Sbjct: 1   MMEENKRVLLGMSGGTDSSVAAMLLLEAGYEVTGVTFR--------FYEFNDSTEYLEDA 52

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E        +          +        + P       N +     A +A
Sbjct: 53  RALATRLGIEHITYDAREIFRKKIVDYFIDE---YMAGHTPVPCTLCNNWLKWPLLAKIA 109

Query: 124 YRLGITNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             +GI  +     V                           L  +    +  P+  + K 
Sbjct: 110 DEMGIFYLATGHYVRKKWMDGSYYITLAADPDKDQSFFLWGLKQDILQRMLLPMGEMTKP 169

Query: 179 ETWKLAQDIG 188
           E    A   G
Sbjct: 170 EARAYAAGRG 179


>gi|262306109|gb|ACY45647.1| gln amidotransferase [Stenochrus portoricensis]
          Length = 196

 Score = 53.4 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 2/63 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +   L+L SGG DS+ C +      + D+V  +  + G   K E        K++   + 
Sbjct: 43  SNKVLMLLSGGVDSTVCAALLHKALKEDQVIAIHINNGFMRKNESLQVEQSLKRLGLKLK 102

Query: 66  KWK 68
              
Sbjct: 103 VID 105


>gi|261252577|ref|ZP_05945150.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio orientalis CIP 102891]
 gi|260935968|gb|EEX91957.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Vibrio orientalis CIP 102891]
          Length = 378

 Score = 53.4 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 35/135 (25%), Gaps = 4/135 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +  +VE L     + +  E  C     + + +   
Sbjct: 8   NSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYC--TAAEDLADAQA 65

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    H +      +   +     +A            +  + I F  F       
Sbjct: 66  VCDKLGIHLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEFADEV 123

Query: 126 LGITNIVIGVCETDY 140
           L    I +G      
Sbjct: 124 LDADYIAMGHYVRRT 138


>gi|145589933|ref|YP_001156530.1| argininosuccinate synthase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189046397|sp|A4SZQ2|ASSY_POLSQ RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|145048339|gb|ABP34966.1| argininosuccinate synthase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 410

 Score = 53.4 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 46/157 (29%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +     A+L +SGG D+S  L W  D     + T + D GQ  ++E        K +   
Sbjct: 1   MSDIKKAVLAYSGGLDTSVILKWLQDTYGCEIVTFTADLGQGEELEPARA----KALQFG 56

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +      + +     +         + T      +   ++    +  R I         A
Sbjct: 57  IKPENIFIDDLREEFVRDFVFPMFRANTIYEGEYLLGTSIARPLIAKRQIEIARLTGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         +   Y       + A     +L
Sbjct: 117 VSHGATGKGNDQVRFELGYYALEPGIKVIAPWREWDL 153


>gi|50084409|ref|YP_045919.1| tRNA-specific 2-thiouridylase MnmA [Acinetobacter sp. ADP1]
 gi|73919892|sp|Q6FCW2|MNMA_ACIAD RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|49530385|emb|CAG68097.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acinetobacter sp. ADP1]
          Length = 377

 Score = 53.4 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 47/166 (28%), Gaps = 5/166 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS   +  L +  +VE L     + +     C     + + +    
Sbjct: 1   MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGLFMKNWEEDDGTEYC--TALEDLADAQAV 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H    A         + ++   +      PN  +     I        A  L
Sbjct: 59  ADKIGIKLHT---ANFAMEYWDRVFEHFLAEYAAGRTPNPDILCNKEIKFRAFIDHAMTL 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
           G   I  G          + R ++   +   ++   +    +H   
Sbjct: 116 GADFIATGHYTRRGESMQNSRGESYAPLLRGVDNNKDQSYFLHAVH 161


>gi|312865771|ref|ZP_07725993.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus downei F0415]
 gi|311098646|gb|EFQ56868.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus downei F0415]
          Length = 374

 Score = 53.4 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 50/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 2   MTD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDY 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    K +    PN  V     I      
Sbjct: 58  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAKYRAGRTPNPDVMCNKEIKFKAFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A  LG   +  G             H    A            L  E    V  PL  
Sbjct: 115 DYAMSLGADYVATGHYAQVSRDEDGTVHMLRGADNNKDQTYFLSQLSQEQLQKVMFPLGH 174

Query: 175 LKKYETWKLAQDIG 188
           L+K E  K+A++ G
Sbjct: 175 LEKPEVRKIAEEAG 188


>gi|323527083|ref|YP_004229236.1| hypothetical protein BC1001_2761 [Burkholderia sp. CCGE1001]
 gi|323384085|gb|ADX56176.1| hypothetical protein BC1001_2761 [Burkholderia sp. CCGE1001]
          Length = 460

 Score = 53.4 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/230 (11%), Positives = 56/230 (24%), Gaps = 27/230 (11%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR--NKVELECRLCVRKKIVEL 63
              P+A + +S G DS                    Y Q   +         +  +    
Sbjct: 135 STPPAAFIPYSHGLDS--------------------YAQYRLHNENAGAAGIMCVQAATH 174

Query: 64  MPKWKDSLGEDHIL--PLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                       +    +  L    H           +        +     +    A  
Sbjct: 175 GQVSSWKTYCRRVFGEEVIALAVPVHVQCPHRSEPTFRSRPFGYYLLAAYGALLAGGAQV 234

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           L    G  ++   +  T    +  C     + +   +       +  + P ++  K +  
Sbjct: 235 LIPENGQGSLGASLVPTGDPKHRSCYPGFTKQLSRFLEKLTRKSIDFYHPALFQTKAQVL 294

Query: 182 KLAQDIGGQDLVNLILEESHTC-YLGKRDKRYEWGYGCNSCPACYLRQKG 230
              Q  G    +  +L +  +C Y  +          C  C  C LR+  
Sbjct: 295 --MQLEGHGVGLGQVLAQHWSCSYDSRWAHAEHRKVHCGICGNCLLRRVA 342


>gi|262277849|ref|ZP_06055642.1| argininosuccinate synthase [alpha proteobacterium HIMB114]
 gi|262224952|gb|EEY75411.1| argininosuccinate synthase [alpha proteobacterium HIMB114]
          Length = 395

 Score = 53.4 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 60/193 (31%), Gaps = 18/193 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE- 62
           +KK    +L +SGG D+S  L W  D++   V   + D GQ  ++  +      KK+   
Sbjct: 1   MKKIKKIVLAYSGGLDTSVILKWLQDKYNAEVICYTSDLGQ--EINRKAIYTNAKKLGVK 58

Query: 63  --LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             ++   K+   +D++ P+     +         ++           +  R I      +
Sbjct: 59  KIIIEDLKEKFVKDYVFPMIRGNALYEGIYLLGTSIARP-------LIARRQIEIAKKFS 111

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
             A   G T         +   Y    +  + A     NL   + +  +       K   
Sbjct: 112 AQAVSHGATGKGNDQVRFELGYYYFGPNIKVIAPWRDWNLNSRTALIKYAK-----KNGI 166

Query: 181 WKLAQDIGGQDLV 193
                  G     
Sbjct: 167 IVPKDKKGAPPFS 179


>gi|308233992|ref|ZP_07664729.1| thiamine biosynthesis/tRNA modification protein ThiI [Atopobium
           vaginae DSM 15829]
 gi|328943998|ref|ZP_08241463.1| thiamine biosynthesis protein ThiI [Atopobium vaginae DSM 15829]
 gi|327491967|gb|EGF23741.1| thiamine biosynthesis protein ThiI [Atopobium vaginae DSM 15829]
          Length = 432

 Score = 53.4 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 49/187 (26%), Gaps = 25/187 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             + L S G DS         R      L F    R +         R+ +  L      
Sbjct: 203 KVVTLLSSGFDSPVATWMVGRRGAVCIPLHFS--GRPQTADTSEYLTRQIVSAL------ 254

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                            +     +   +I      +  +     I    A  LA   G  
Sbjct: 255 --------DPTGCIGRLYVCPFGDQQREISLCVPQSLRIICYRRIMFAVAEKLALAEGAK 306

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
           ++V G      +          + ++    +     + V  PL+   K E  K +  IG 
Sbjct: 307 SLVTGESLGQVAS---------QTLDNIAAVNEMVSLPVLRPLIGSDKQEIIKRSLQIGT 357

Query: 190 QDLVNLI 196
            D+ +  
Sbjct: 358 YDISSKP 364


>gi|269925445|ref|YP_003322068.1| argininosuccinate synthase [Thermobaculum terrenum ATCC BAA-798]
 gi|269789105|gb|ACZ41246.1| argininosuccinate synthase [Thermobaculum terrenum ATCC BAA-798]
          Length = 403

 Score = 53.4 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 36/97 (37%), Gaps = 2/97 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI-VE 62
          ++K    +L +SGG D+S  L+W  +     V   + D GQ  +VE   +  +       
Sbjct: 1  MEKIKKVVLAYSGGLDTSVILAWIKENYGAEVIAFTADVGQGEEVEEAKQKALATGASKA 60

Query: 63 LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ 99
               ++    D + P+     +  +      ++   
Sbjct: 61 YALDLREEFVRDFVFPVIRAAAVYENQYLMGTSIARP 97


>gi|254456653|ref|ZP_05070082.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Pelagibacter sp. HTCC7211]
 gi|207083655|gb|EDZ61081.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Pelagibacter sp. HTCC7211]
          Length = 372

 Score = 53.4 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 54/181 (29%), Gaps = 3/181 (1%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
           + ++  SGG DSST      +   +V  ++   Y    +V    + C  + I++      
Sbjct: 18  TVVVAMSGGVDSSTVAGMMKNEGYKVIGITLKLYDDGKEVAKSKQCCSGQDIMDAKRVAH 77

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF--AATLAYRL 126
               E  IL               +  +  +                L        A  L
Sbjct: 78  KLNIEHKILYYQDKFKQGVIDNFVDSYLNGETPIPCVQCNQTVKFKDLFEVSKELNADAL 137

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
              + V  +   + +       +         N   E    +  PL  + K ET ++A+D
Sbjct: 138 VTGHYVKSITSNNTTNMYRAIDENRDQSYFLFNTTREQLDYLRFPLGGMLKDETREIAKD 197

Query: 187 I 187
           +
Sbjct: 198 L 198


>gi|119484405|ref|ZP_01619022.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Lyngbya sp. PCC 8106]
 gi|119457879|gb|EAW39002.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Lyngbya sp. PCC 8106]
          Length = 539

 Score = 53.4 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 52/186 (27%), Gaps = 11/186 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST          D +  +  D G   K E E    + K   E     
Sbjct: 236 KRVLLALSGGVDSSTLAFLMHRAIGDNLTCMFIDQGFMRKYEPE---RLVKLFEEQFHIP 292

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G         +   K +        V       L     LA    
Sbjct: 293 VQYVNARERFLTKLNG-------VTDPEEKRKIIGHEFIGVFEEESSRLGPFDYLAQGTL 345

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +++            +     I++      L  +    +  PL  L K E  K+ + I
Sbjct: 346 YPDVIESADTNVDPQTGERVAVKIKSHHNVGGLPKDLRFKLIEPLRKLFKDEVRKVGRSI 405

Query: 188 GGQDLV 193
           G  + +
Sbjct: 406 GLPEEI 411


>gi|262306001|gb|ACY45593.1| gln amidotransferase [Aphonopelma chalcodes]
          Length = 197

 Score = 53.4 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 2/63 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               L+L SGG DS+ C +      + D+V  +  D G   K E        KK+   + 
Sbjct: 43  NSKVLMLVSGGVDSTVCAALLHRALQADQVIAIHIDNGFMRKNESFQVETSLKKLGLQLK 102

Query: 66  KWK 68
              
Sbjct: 103 VLN 105


>gi|256846987|ref|ZP_05552433.1| tRNA methyl transferase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715651|gb|EEU30626.1| tRNA methyl transferase [Lactobacillus coleohominis 101-4-CHN]
          Length = 377

 Score = 53.4 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 48/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS        +   V  +             C     +  
Sbjct: 1   MAD--NSHTRVVVGMSGGVDSSVTALLLKRQGYDVVGVFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + K    + +    PN  V     I      
Sbjct: 57  KDVAKVATQIGIPYYSVN---FEKEYWDRVFKYFIAEYKKGRTPNPDVICNKEIKFKAFI 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A +LG   +  G             H      +          L  E    V  PL  
Sbjct: 114 EYANQLGADYVATGHYADLKRDADGNMHLMRAKDQHKDQTYFLSQLDHEQLDHVMFPLAN 173

Query: 175 LKKYETWKLAQDIG 188
             K E  ++A++ G
Sbjct: 174 YTKPEIRQIAKEAG 187


>gi|71281561|ref|YP_269601.1| tRNA-specific 2-thiouridylase MnmA [Colwellia psychrerythraea 34H]
 gi|123632113|sp|Q480B8|MNMA_COLP3 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|71147301|gb|AAZ27774.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Colwellia psychrerythraea 34H]
          Length = 375

 Score = 53.4 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 37/130 (28%), Gaps = 4/130 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS       ++  +VE L     + +  +  C     + + +       
Sbjct: 14  KVIVGMSGGVDSSVSAYLLKEQGYQVEGLFMKNWEEDDTDEYCA--ASQDLEDAQAICDK 71

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              + H +      +   +     +A            +  + I F  F       LG  
Sbjct: 72  LDIKLHTIN--FATEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFACEDLGAD 129

Query: 130 NIVIGVCETD 139
            I  G     
Sbjct: 130 YIATGHYVQR 139


>gi|26107782|gb|AAN79981.1|AE016759_255 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli CFT073]
          Length = 383

 Score = 53.4 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 54/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 16  MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 73

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 74  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 131

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             L    I  G            R                 L  E       P+  L+K 
Sbjct: 132 EDLCADYIATGHYVRRAXVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 191

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 192 QVRKIAEDLG 201


>gi|159185866|ref|NP_356917.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Agrobacterium tumefaciens str. C58]
 gi|25298384|pir||AC3012 hypothetical protein trmU [imported] - Agrobacterium tumefaciens
           (strain C58, Dupont)
 gi|159141000|gb|AAK89702.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Agrobacterium tumefaciens str. C58]
          Length = 380

 Score = 53.4 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 48/185 (25%), Gaps = 14/185 (7%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
            SGG DSS            V  ++   Y     V      C  + I +     +     
Sbjct: 1   MSGGVDSSVVAGILKREGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCETLGIP 60

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI-- 131
            ++L           ++    A        P   V     +        A  LG   +  
Sbjct: 61  HYVLD---YEARFRETVINPFAEAYAMGETPIPCVACNQTVKFADLLATAQELGADALAT 117

Query: 132 --VIGVCETDYSGYPDCRHDT------IRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              I       SG P  R                     E    +  PL  L K ET  L
Sbjct: 118 GHYIRSRPNPVSGQPGRRALYRPIDSDRDQSWFLFATTQEQIDYLRFPLGGLSKAETRAL 177

Query: 184 AQDIG 188
           A+++G
Sbjct: 178 AEEMG 182


>gi|170761419|ref|YP_001788611.1| GMP synthase [Clostridium botulinum A3 str. Loch Maree]
 gi|226738425|sp|B1L1J7|GUAA_CLOBM RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|169408408|gb|ACA56819.1| GMP synthase [Clostridium botulinum A3 str. Loch Maree]
          Length = 510

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 58/187 (31%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS            ++  +  D+G   K E +    + K   E+    
Sbjct: 216 KKVICALSGGVDSSVAAVIVHKAIGKQLTCIFVDHGLLRKDEGDQVEKIFKDQFEMNLIR 275

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            ++           LG +   S  +     I +               +      A +LG
Sbjct: 276 VNAQDR-------FLGKLKGVSDPERKRKIIGEEF-------------IRVFEEEAKKLG 315

Query: 128 -ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I+ +V G    D          TI++      L  +    +  PL  L K E   + ++
Sbjct: 316 DISFLVQGTIYPDIVESGTNTSATIKSHHNVGGLPEDMEFKLIEPLRELFKDEVRAVGEE 375

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 376 LGIPHKL 382


>gi|160896253|ref|YP_001561835.1| tRNA-specific 2-thiouridylase MnmA [Delftia acidovorans SPH-1]
 gi|205816627|sp|A9BS40|MNMA_DELAS RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|160361837|gb|ABX33450.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Delftia acidovorans SPH-1]
          Length = 372

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 45/189 (23%), Gaps = 12/189 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DS+        +   V  +     + +     C   V       +     
Sbjct: 5   RVVVGLSGGVDSAVTAHLLKQQGHEVVGIFMKNWEDDDDSEYCSSNVDFVDAAAVADVVG 64

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E                +      + Q    PN  V     I        A RLG  
Sbjct: 65  IEIEH-----VNFASEYKDRVFAEFLREYQAGRTPNPDVLCNAEIKFKAFLDHAMRLGAE 119

Query: 130 NIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
            I  G                                L          P+  LKK E  +
Sbjct: 120 KIATGHYARVRQNPDTQLFELLKGLDPAKDQSYFLHRLNQAQLSRSMFPVGELKKTEVRR 179

Query: 183 LAQDIGGQD 191
           +A++IG  +
Sbjct: 180 IAEEIGLPN 188


>gi|161486247|ref|NP_753421.2| tRNA-specific 2-thiouridylase MnmA [Escherichia coli CFT073]
 gi|30173414|sp|Q8CXZ8|MNMA_ECOL6 RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 368

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 54/190 (28%), Gaps = 9/190 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + + A   ++  SGG DSS        +  +VE L     + +  E  C       + + 
Sbjct: 1   MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +A            +  + I F  F    A
Sbjct: 59  QAVCDKLGIELHTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             L    I  G            R                 L  E       P+  L+K 
Sbjct: 117 EDLCADYIATGHYVRRAXVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKP 176

Query: 179 ETWKLAQDIG 188
           +  K+A+D+G
Sbjct: 177 QVRKIAEDLG 186


>gi|48477555|ref|YP_023261.1| thiamine biosynthesis protein ThiI [Picrophilus torridus DSM 9790]
 gi|48430203|gb|AAT43068.1| hypothetical thiamine biosynthesis protein thiI [Picrophilus
           torridus DSM 9790]
          Length = 469

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 55/193 (28%), Gaps = 30/193 (15%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           ++   SAL LFSGG DS       + R     +   SF + +     L     +  K   
Sbjct: 165 LRSEGSALSLFSGGNDSPLATYMVMKRGSPCDLLFCSFAHPEDTYNMLLSARRLFDKY-- 222

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                                     S   +  + I D     + +  RN  +       
Sbjct: 223 --------------------------SYGYDPLIYIIDGTELASRIMERNQKYGNLIFKK 256

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              L   N+                  + + +E   +L       +  PL+   K E   
Sbjct: 257 LLYLYADNLCSLKNYNAMVTGESIGQVSSQTLENLRSLSHGIDHPILRPLIGFDKDEIVS 316

Query: 183 LAQDIGGQDLVNL 195
            ++++G  +  +L
Sbjct: 317 KSRELGIFEYNHL 329


>gi|323494972|ref|ZP_08100063.1| tRNA-specific 2-thiouridylase MnmA [Vibrio brasiliensis LMG 20546]
 gi|323310767|gb|EGA63940.1| tRNA-specific 2-thiouridylase MnmA [Vibrio brasiliensis LMG 20546]
          Length = 378

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 35/135 (25%), Gaps = 4/135 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +  +VE L     + +  E  C     + + +   
Sbjct: 8   NSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYC--TAAEDLADAQA 65

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    H +      +   +     +A            +  + I F  F       
Sbjct: 66  VCDKLGIHLHTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEFADEV 123

Query: 126 LGITNIVIGVCETDY 140
           L    I +G      
Sbjct: 124 LDADYIAMGHYVRRT 138


>gi|83746745|ref|ZP_00943793.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ralstonia solanacearum UW551]
 gi|207744291|ref|YP_002260683.1| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           protein [Ralstonia solanacearum IPO1609]
 gi|83726514|gb|EAP73644.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ralstonia solanacearum UW551]
 gi|206595696|emb|CAQ62623.1| probable trna
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           protein [Ralstonia solanacearum IPO1609]
          Length = 370

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 44/188 (23%), Gaps = 10/188 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS        +   V  L     + +     C         + +    
Sbjct: 4   KRVVVGLSGGVDSSVTAWLLKQQGYEVVGLFMKNWEDDDDSEYCSTRQ-----DWIDVVS 58

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +   D  +            +  +   +      PN  V     I        A  LG 
Sbjct: 59  VADLIDVDVEAVNFAAEYKDRVFADFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMALGA 118

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             I  G                    T         L          PL  + K    ++
Sbjct: 119 DTIATGHYARVREVDGRFELLKAFDHTKDQSYFLHRLNQAQLSRTLFPLGEIPKTRVREI 178

Query: 184 AQDIGGQD 191
           A +IG  +
Sbjct: 179 AAEIGLPN 186


>gi|290890450|ref|ZP_06553525.1| hypothetical protein AWRIB429_0915 [Oenococcus oeni AWRIB429]
 gi|290479846|gb|EFD88495.1| hypothetical protein AWRIB429_0915 [Oenococcus oeni AWRIB429]
          Length = 406

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 1/68 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           A   +L +SGG D+S  + W  D+   V  +S D GQ +  ++E       KI  +   
Sbjct: 1  MADKIVLAYSGGLDTSVTIPWLKDKGYEVIAVSLDVGQ-HGKQIENIQKKALKIGAIQSF 59

Query: 67 WKDSLGED 74
            D   E 
Sbjct: 60 IIDGKDEF 67


>gi|225569024|ref|ZP_03778049.1| hypothetical protein CLOHYLEM_05103 [Clostridium hylemonae DSM
           15053]
 gi|225161823|gb|EEG74442.1| hypothetical protein CLOHYLEM_05103 [Clostridium hylemonae DSM
           15053]
          Length = 430

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 54/182 (29%), Gaps = 20/182 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +  L     ++  +  ++G   K E E  + V K  +     + 
Sbjct: 137 KVLLALSGGVDSSVVAAMLLKAIGQQLTCVHVNHGLMRKNESEGVVEVFKNQLHANLIYV 196

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D+           LG +   S  +     I    +       R +             GI
Sbjct: 197 DAT-------ERFLGKLDGVSDPEQKRKIIGGEFIRVFEEEARKLD------------GI 237

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G    D           +++      L  +    +  PL  L K E      ++G
Sbjct: 238 EFLGQGTIYPDIIESGTKTAKMVKSHHNVGGLPEDLQFELVEPLKQLFKDEVRACGIELG 297

Query: 189 GQ 190
             
Sbjct: 298 LP 299


>gi|218248292|ref|YP_002373663.1| tRNA-specific 2-thiouridylase MnmA [Cyanothece sp. PCC 8801]
 gi|226704769|sp|B7K1G5|MNMA_CYAP8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|218168770|gb|ACK67507.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Cyanothece sp. PCC 8801]
          Length = 349

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 44/157 (28%), Gaps = 8/157 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS   +    +   V  L+        +      C  + +V+     +
Sbjct: 2   NKVVVGLSGGVDSSVAAAVLHHQGYEVIGLTL------WLMKGKGQCCSEGMVDAAFICE 55

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 HI+    +   +  +    V+               R + F          LG 
Sbjct: 56  QLGIPHHIVDSRDVFQANIVNYL--VSGYEAGITPLPCSQCNRAVKFGPMLNYARQELGC 113

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH 165
             I  G            R+  +RAI+   +     +
Sbjct: 114 DRIATGHYARIRYDEISQRYQLLRAIDRNKDQSYFLY 150


>gi|34498857|ref|NP_903072.1| tRNA-specific 2-thiouridylase MnmA [Chromobacterium violaceum ATCC
           12472]
 gi|81653627|sp|Q7MBE1|MNMA_CHRVO RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|34104709|gb|AAQ61066.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chromobacterium violaceum ATCC 12472]
          Length = 384

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 49/188 (26%), Gaps = 10/188 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS        +   V  +     + +  +  C   +++  ++ M   
Sbjct: 30  KKRIVVGMSGGVDSSVTAWLLKQQGHEVIGVFMQNWEDDNDDEYCS--IKQDALDAMSVA 87

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                +  I+            +      +      PN  V     I        A  LG
Sbjct: 88  DIVGIDMEIVN---FAKEYKDRVFSYFLKEYSAGRTPNPDVLCNAEIKFKAFLDYAMELG 144

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G                    T         L          PL  ++K E  +
Sbjct: 145 ADCIATGHYARKLEQDGTHYLMKAVDHTKDQSYFLYRLQQHQLAKAIFPLGDIRKTEVRR 204

Query: 183 LAQDIGGQ 190
           LA++ G  
Sbjct: 205 LAEEAGLP 212


>gi|42560982|ref|NP_975433.1| tRNA-specific 2-thiouridylase MnmA [Mycoplasma mycoides subsp.
           mycoides SC str. PG1]
 gi|81400641|sp|Q6MTG1|MNMA_MYCMS RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|42492479|emb|CAE77075.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycoplasma mycoides subsp. mycoides SC str. PG1]
 gi|301320545|gb|ADK69188.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale]
          Length = 375

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 53/193 (27%), Gaps = 13/193 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR------KKI 60
                ++  SGG DSS      L++   VE L                         ++ 
Sbjct: 1   MKQKVIVGLSGGVDSSVACYLLLEQGYEVEGLFMRNWDSATNNDILGNRNINDDICPQEQ 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             L  K         +  +  + +      +  +    +        +  + I F  F  
Sbjct: 61  DYLDAKAVADKLNIKLYRVDFIKEYWDYVFSYFIEEYKKARTPNPDILCNKYIKFDKFLN 120

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI-------NLGMESHVTVHTPLM 173
               +L    I +G            +++ I+A +T          L  +       PL 
Sbjct: 121 YAINQLNADYIAMGHYAKVEFNKTTNQYELIKASDTNKDQTYFLSQLNQKQLSKTLFPLA 180

Query: 174 WLKKYETWKLAQD 186
            L K +  K+A  
Sbjct: 181 NLTKEQVRKIALK 193


>gi|26554279|ref|NP_758213.1| tRNA-(5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Mycoplasma penetrans HF-2]
 gi|30173413|sp|Q8CXQ3|MNMA_MYCPE RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|26454288|dbj|BAC44617.1| tRNA-(5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Mycoplasma penetrans HF-2]
          Length = 370

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 49/194 (25%), Gaps = 14/194 (7%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS        R   V  +          +      ++ K+     ++ 
Sbjct: 2   KKVIVGISGGVDSSVSAYLLKLRGYDVMGVFMQNWDPYINKESNNDAIKSKLDTCEAEYD 61

Query: 69  DSLGE-------DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
             +           +  +  + +         +    +        +  + I F  F   
Sbjct: 62  YQIASKVCQRLGIKLERINFIKEYWDMVFEPFLDEYKKGLTPNPDILCNKYIKFGAFHKY 121

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAI-------ETAINLGMESHVTVHTPLMW 174
                    I  G          +  ++ + A            +L          PL  
Sbjct: 122 CFENFDCDYIATGHYADVRFNQANNIYELLEAKDIEKDQTYFLCSLNQSQLSKSIFPLAD 181

Query: 175 LKKYETWKLAQDIG 188
           L K E  ++A  IG
Sbjct: 182 LTKKEVREIANKIG 195


>gi|19111975|ref|NP_595183.1| argininosuccinate synthase (predicted) [Schizosaccharomyces pombe
           972h-]
 gi|6685242|sp|O94354|ASSY_SCHPO RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|3947869|emb|CAA22280.1| argininosuccinate synthase (predicted) [Schizosaccharomyces pombe]
          Length = 410

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 50/157 (31%), Gaps = 14/157 (8%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE- 62
           + ++    +L +SGG D+S  L+W ++    V     + GQ  + + +       K+   
Sbjct: 1   MPQEVKRCVLAYSGGLDTSCILAWLIEEGWEVICYMANVGQ--EEDWDAAREKALKVGAK 58

Query: 63  --LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
              +   ++    D ++P A    I  +      ++           +  R  I +    
Sbjct: 59  KVYVEDLREEFINDTVIPAAQANAIYENVYLLGTSLARP--------IIARRQIQIAEKE 110

Query: 121 TL-AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIET 156
              A   G T         + + Y       + A   
Sbjct: 111 NCIAVSHGCTGKGNDQVRFELAYYALKPDVQVIAPWR 147


>gi|83953541|ref|ZP_00962262.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sulfitobacter sp. NAS-14.1]
 gi|83841486|gb|EAP80655.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sulfitobacter sp. NAS-14.1]
          Length = 380

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/149 (11%), Positives = 35/149 (23%), Gaps = 4/149 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +   +    V  ++   Y     +  +   C    I +     +
Sbjct: 22  RVVVAMSGGVDSSVVAAMLAEEGYDVVGVTLQLYDHGAALARKGACCAGIDIHDARRVAE 81

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L       +   ++    A        P   +     +        A  L  
Sbjct: 82  SMGFPHYVLDYEN---VFKDAVIDEFADSYLGGATPVPCIRCNERVKFKDLLETAKDLDA 138

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETA 157
             +  G       G               
Sbjct: 139 DCMATGHYIQRKMGLDGAELHCAADANRD 167


>gi|294636777|ref|ZP_06715115.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Edwardsiella tarda ATCC 23685]
 gi|291089992|gb|EFE22553.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Edwardsiella tarda ATCC 23685]
          Length = 376

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 49/192 (25%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +V  L     + +  +  C        
Sbjct: 10  MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYQVAGLFMKNWEEDDNDEYCSAAADL-- 65

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +          E H +      +   +     +             +  + I F  F  
Sbjct: 66  ADAQAVCDKLGIELHTVN--FAAEYWDNVFELFLQEYRAGRTPNPDILCNKEIKFKAFLE 123

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   I  G            +                 L  +       P+  L
Sbjct: 124 FAAEDLGADYIATGHYVRRRDIDGTTQLLRGVDANKDQSYFLYTLSHQQVAQSLFPVGEL 183

Query: 176 KKYETWKLAQDI 187
           +K E  ++A  +
Sbjct: 184 EKPEVRRIATQL 195


>gi|90410909|ref|ZP_01218923.1| thiamine biosynthesis protein ThiI [Photobacterium profundum 3TCK]
 gi|90328122|gb|EAS44433.1| thiamine biosynthesis protein ThiI [Photobacterium profundum 3TCK]
          Length = 482

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 60/183 (32%), Gaps = 27/183 (14%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV-RKKIVELMPKWKD 69
            L L SGG DS       + R  +V    F+ G            +  K++   + K   
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGP-------AHEIGVKQVSHFLWKKYG 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           S  +   + +            + V  +I +             +F+  A  +A R GI 
Sbjct: 233 SSAKVKFISIDF----------EPVVAEILEKVDNGQMGVVLKRMFMRAAGQVAERYGIQ 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      S         I  +  ++         +  PL+   K +   +A++IG 
Sbjct: 283 ALVTGEALGQVSSQTLTNLRMIDNVTDSL---------ILRPLINWDKEDIIDIARNIGT 333

Query: 190 QDL 192
           ++ 
Sbjct: 334 EEF 336


>gi|54308005|ref|YP_129025.1| thiamine biosynthesis protein ThiI [Photobacterium profundum SS9]
 gi|81615455|sp|Q6LU02|THII_PHOPR RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|46912431|emb|CAG19223.1| Putative thiamin biosynthesis protein, ThiI [Photobacterium
           profundum SS9]
          Length = 482

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 60/183 (32%), Gaps = 27/183 (14%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV-RKKIVELMPKWKD 69
            L L SGG DS       + R  +V    F+ G            +  K++   + K   
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGP-------AHEIGVKQVSHFLWKKYG 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           S  +   + +            + V  +I +             +F+  A  +A R GI 
Sbjct: 233 SSAKVKFISIDF----------EPVVAEILEKVDNGQMGVVLKRMFMRAAGQVAERYGIQ 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      S         I  +  ++         +  PL+   K +   +A++IG 
Sbjct: 283 ALVTGEALGQVSSQTLTNLRMIDNVTDSL---------ILRPLINWDKEDIIDIARNIGT 333

Query: 190 QDL 192
           ++ 
Sbjct: 334 EEF 336


>gi|330973096|gb|EGH73162.1| argininosuccinate synthase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 405

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 59/205 (28%), Gaps = 13/205 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +         + T      +   ++    +  R I         A
Sbjct: 61  ------YIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN------LGMESHVTVHTPLMWLKK 177
              G T         +   Y       + A     +      L   +           KK
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHNIPIERHGKK 174

Query: 178 YETWKLAQDIGGQDLVNLILEESHT 202
              + +  ++        +LE++ T
Sbjct: 175 KSPYSMDANLLHISYEGGVLEDTWT 199


>gi|330966672|gb|EGH66932.1| argininosuccinate synthase [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 405

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 59/205 (28%), Gaps = 13/205 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +         + T      +   ++    +  R I         A
Sbjct: 61  ------YIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN------LGMESHVTVHTPLMWLKK 177
              G T         +   Y       + A     +      L   +           KK
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHNIPIERHGKK 174

Query: 178 YETWKLAQDIGGQDLVNLILEESHT 202
              + +  ++        +LE++ T
Sbjct: 175 KSPYSMDANLLHISYEGGVLEDTWT 199


>gi|330898577|gb|EGH29996.1| argininosuccinate synthase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 267

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 59/205 (28%), Gaps = 13/205 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +         + T      +   ++    +  R I         A
Sbjct: 61  ------YIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN------LGMESHVTVHTPLMWLKK 177
              G T         +   Y       + A     +      L   +           KK
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHNIPIERHGKK 174

Query: 178 YETWKLAQDIGGQDLVNLILEESHT 202
              + +  ++        +LE++ T
Sbjct: 175 KSPYSMDANLLHISYEGGVLEDTWT 199


>gi|291222319|ref|XP_002731165.1| PREDICTED: guanine monophosphate synthetase-like [Saccoglossus
           kowalevskii]
          Length = 578

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 26/70 (37%), Gaps = 5/70 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L L SGG DS+ C +         +V  +  D G   K E      V + + EL  K 
Sbjct: 130 KVLALVSGGVDSTVCAALLHKALDNSQVIAVHIDNGFMRKNE---SQSVAESLSELGLKL 186

Query: 68  KDSLGEDHIL 77
           K  +   H  
Sbjct: 187 KGIVNASHTF 196


>gi|226950720|ref|YP_002805811.1| GMP synthase [Clostridium botulinum A2 str. Kyoto]
 gi|254800092|sp|C1FLV2|GUAA_CLOBJ RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226844589|gb|ACO87255.1| GMP synthase [Clostridium botulinum A2 str. Kyoto]
          Length = 510

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 58/187 (31%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS            ++  +  D+G   K E +    + K   ++    
Sbjct: 216 KKVICALSGGVDSSVAAVIVHKAIGKQLTCIFVDHGLLRKDEGDQVEKIFKDQFDMNLIR 275

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            ++           LG +   S  +     I +               +      A +LG
Sbjct: 276 VNAQDR-------FLGKLKGVSDPERKRKIIGEEF-------------IRVFEEEAKKLG 315

Query: 128 -ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I+ +V G    D          TI++      L  +    +  PL  L K E   + ++
Sbjct: 316 NISFLVQGTIYPDIVESGTNTSATIKSHHNVGGLPEDMEFKLIEPLRELFKDEVRAVGEE 375

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 376 LGIPHKL 382


>gi|187776788|ref|ZP_02993261.1| hypothetical protein CLOSPO_00304 [Clostridium sporogenes ATCC
           15579]
 gi|187775447|gb|EDU39249.1| hypothetical protein CLOSPO_00304 [Clostridium sporogenes ATCC
           15579]
          Length = 510

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 58/187 (31%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS            ++  +  D+G   K E +    + K   ++    
Sbjct: 216 KKVICALSGGVDSSVAAVIVHKAIGKQLTCIFVDHGLLRKDEGDQVEKIFKDQFDMNLIR 275

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            ++           LG +   S  +     I +               +      A +LG
Sbjct: 276 VNAQDR-------FLGKLKGVSDPERKRKIIGEEF-------------IRVFEEEAKKLG 315

Query: 128 -ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I+ +V G    D          TI++      L  +    +  PL  L K E   + ++
Sbjct: 316 DISFLVQGTIYPDIVESGTNTSATIKSHHNVGGLPEDMEFKLIEPLRELFKDEVRAVGEE 375

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 376 LGIPHKL 382


>gi|168179058|ref|ZP_02613722.1| GMP synthase [Clostridium botulinum NCTC 2916]
 gi|182670215|gb|EDT82191.1| GMP synthase [Clostridium botulinum NCTC 2916]
          Length = 510

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 58/187 (31%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS            ++  +  D+G   K E +    + K   ++    
Sbjct: 216 KKVICALSGGVDSSVAAVIVHKAIGKQLTCIFVDHGLLRKDEGDQVEKIFKDQFDMNLIR 275

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            ++           LG +   S  +     I +               +      A +LG
Sbjct: 276 VNAQDR-------FLGKLKGVSDPERKRKIIGEEF-------------IRVFEEEAKKLG 315

Query: 128 -ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I+ +V G    D          TI++      L  +    +  PL  L K E   + ++
Sbjct: 316 DISFLVQGTIYPDIVESGTNTSATIKSHHNVGGLPEDMEFKLIEPLRELFKDEVRAVGEE 375

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 376 LGIPHKL 382


>gi|153940088|ref|YP_001392640.1| GMP synthase [Clostridium botulinum F str. Langeland]
 gi|170756813|ref|YP_001782918.1| GMP synthase [Clostridium botulinum B1 str. Okra]
 gi|226738423|sp|B1IFD1|GUAA_CLOBK RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226738424|sp|A7GIN0|GUAA_CLOBL RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|152935984|gb|ABS41482.1| GMP synthase [Clostridium botulinum F str. Langeland]
 gi|169122025|gb|ACA45861.1| GMP synthase [Clostridium botulinum B1 str. Okra]
 gi|295320625|gb|ADG01003.1| GMP synthase [Clostridium botulinum F str. 230613]
 gi|322807605|emb|CBZ05180.1| gmp synthase [glutamine-hydrolyzing] [Clostridium botulinum H04402
           065]
          Length = 510

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 58/187 (31%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS            ++  +  D+G   K E +    + K   ++    
Sbjct: 216 KKVICALSGGVDSSVAAVIVHKAIGKQLTCIFVDHGLLRKDEGDQVEKIFKDQFDMNLIR 275

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            ++           LG +   S  +     I +               +      A +LG
Sbjct: 276 VNAQDR-------FLGKLKGVSDPERKRKIIGEEF-------------IRVFEEEAKKLG 315

Query: 128 -ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I+ +V G    D          TI++      L  +    +  PL  L K E   + ++
Sbjct: 316 DISFLVQGTIYPDIVESGTNTSATIKSHHNVGGLPEDMEFKLIEPLRELFKDEVRAVGEE 375

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 376 LGIPHKL 382


>gi|66047119|ref|YP_236960.1| argininosuccinate synthase [Pseudomonas syringae pv. syringae
           B728a]
 gi|75500941|sp|Q4ZPK0|ASSY_PSEU2 RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|63257826|gb|AAY38922.1| Argininosuccinate synthase [Pseudomonas syringae pv. syringae
           B728a]
 gi|330949997|gb|EGH50257.1| argininosuccinate synthase [Pseudomonas syringae Cit 7]
          Length = 405

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 59/205 (28%), Gaps = 13/205 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +         + T      +   ++    +  R I         A
Sbjct: 61  ------YIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN------LGMESHVTVHTPLMWLKK 177
              G T         +   Y       + A     +      L   +           KK
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHNIPIERHGKK 174

Query: 178 YETWKLAQDIGGQDLVNLILEESHT 202
              + +  ++        +LE++ T
Sbjct: 175 KSPYSMDANLLHISYEGGVLEDTWT 199


>gi|28871297|ref|NP_793916.1| argininosuccinate synthase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213970868|ref|ZP_03398991.1| argininosuccinate synthase [Pseudomonas syringae pv. tomato T1]
 gi|301384497|ref|ZP_07232915.1| argininosuccinate synthase [Pseudomonas syringae pv. tomato Max13]
 gi|302059912|ref|ZP_07251453.1| argininosuccinate synthase [Pseudomonas syringae pv. tomato K40]
 gi|302130511|ref|ZP_07256501.1| argininosuccinate synthase [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|31562913|sp|Q87XM3|ASSY_PSESM RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|28854547|gb|AAO57611.1| argininosuccinate synthase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213924391|gb|EEB57963.1| argininosuccinate synthase [Pseudomonas syringae pv. tomato T1]
 gi|330877333|gb|EGH11482.1| argininosuccinate synthase [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
 gi|331015673|gb|EGH95729.1| argininosuccinate synthase [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 405

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 59/205 (28%), Gaps = 13/205 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +         + T      +   ++    +  R I         A
Sbjct: 61  ------YIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN------LGMESHVTVHTPLMWLKK 177
              G T         +   Y       + A     +      L   +           KK
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHNIPIERHGKK 174

Query: 178 YETWKLAQDIGGQDLVNLILEESHT 202
              + +  ++        +LE++ T
Sbjct: 175 KSPYSMDANLLHISYEGGVLEDTWT 199


>gi|148825979|ref|YP_001290732.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae PittEE]
 gi|189030631|sp|A5UC48|THII_HAEIE RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|148716139|gb|ABQ98349.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae PittEE]
          Length = 485

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 55/185 (29%), Gaps = 31/185 (16%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE---LMPKW 67
            L L SGG DS       + R  RV    F+ G            V  +I         W
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-----------VAHEIGVKQMAYHIW 228

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +       +  +AI  +     + + V        L    V   + +        A R  
Sbjct: 229 QRYSASHKVRFIAINFEGVVGEILEKVDNGQMGVVLKRMMVRAASKV--------AQRFN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  IV G      S         I     A+         V  PL+   K +   +A++I
Sbjct: 281 IEAIVTGEALGQVSSQTLTNLRLIDEAADAL---------VLRPLITHDKEQIIAMAKEI 331

Query: 188 GGQDL 192
           G  D+
Sbjct: 332 GTDDI 336


>gi|71736983|ref|YP_276023.1| argininosuccinate synthase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|237798776|ref|ZP_04587237.1| argininosuccinate synthase [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|257486626|ref|ZP_05640667.1| argininosuccinate synthase [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|289650465|ref|ZP_06481808.1| argininosuccinate synthase [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|289676757|ref|ZP_06497647.1| argininosuccinate synthase [Pseudomonas syringae pv. syringae FF5]
 gi|302184718|ref|ZP_07261391.1| argininosuccinate synthase [Pseudomonas syringae pv. syringae 642]
 gi|119361306|sp|Q48F14|ASSY_PSE14 RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|71557536|gb|AAZ36747.1| argininosuccinate synthase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|320327086|gb|EFW83100.1| argininosuccinate synthase [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330879062|gb|EGH13211.1| argininosuccinate synthase [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330937556|gb|EGH41497.1| argininosuccinate synthase [Pseudomonas syringae pv. pisi str.
           1704B]
 gi|330981563|gb|EGH79666.1| argininosuccinate synthase [Pseudomonas syringae pv. aptata str.
           DSM 50252]
 gi|330989531|gb|EGH87634.1| argininosuccinate synthase [Pseudomonas syringae pv. lachrymans
           str. M301315]
 gi|331010108|gb|EGH90164.1| argininosuccinate synthase [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|331021629|gb|EGI01686.1| argininosuccinate synthase [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 405

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 59/205 (28%), Gaps = 13/205 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +         + T      +   ++    +  R I         A
Sbjct: 61  ------YIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN------LGMESHVTVHTPLMWLKK 177
              G T         +   Y       + A     +      L   +           KK
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHNIPIERHGKK 174

Query: 178 YETWKLAQDIGGQDLVNLILEESHT 202
              + +  ++        +LE++ T
Sbjct: 175 KSPYSMDANLLHISYEGGVLEDTWT 199


>gi|326803425|ref|YP_004321243.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651703|gb|AEA01886.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Aerococcus urinae ACS-120-V-Col10a]
          Length = 374

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 52/193 (26%), Gaps = 13/193 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MND  KK    +L  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MND--KKNKKVVLGMSGGVDSSVSALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + + +  PN  V     I      
Sbjct: 57  RDVQAVASQIGIPYYSVN---FEKEYWDRVFEYFLDEYRHDRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYP------DCRHDTIRAIETAINLGMESHVTVHTPLMW 174
             A  LG   + +G      +                        L  E       P+  
Sbjct: 114 DYALDLGADYVAMGHYARVRTNDQGEVELLRGVDSNKDQTYFLNQLSQEQLQHALFPIGE 173

Query: 175 LKKYETWKLAQDI 187
           L+K E  K+A+D 
Sbjct: 174 LEKSEVRKIAEDH 186


>gi|83951896|ref|ZP_00960628.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Roseovarius nubinhibens ISM]
 gi|83836902|gb|EAP76199.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Roseovarius nubinhibens ISM]
          Length = 380

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/183 (12%), Positives = 48/183 (26%), Gaps = 4/183 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +   +    V  ++   Y     +  +   C    I +     +
Sbjct: 20  RVVVAMSGGVDSSVVAAQLAEEGYDVVGVTLQLYDHGAALAKKGACCAGIDIHDARRVAE 79

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT--LAYRL 126
           +     ++L    +   +      +  +                   L+  A    A  +
Sbjct: 80  EMGFPHYVLDYENIFQDAVIDEFADSYLAGATPVPCIRCNERVKFKDLLQTARDLDADCM 139

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL-KKYETWKLAQ 185
              + +      +                   +   E    +  PL  L  K  T +LA 
Sbjct: 140 ATGHYIQRKQGQNGPELHCATDANRDQSYFLFSTTPEQLEFLRFPLGHLPSKDATRELAA 199

Query: 186 DIG 188
             G
Sbjct: 200 KYG 202


>gi|297183152|gb|ADI19294.1| GMP synthase, pp-ATPase domain/subunit [uncultured SAR406 cluster
           bacterium HF0500_01L02]
          Length = 516

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 53/186 (28%), Gaps = 17/186 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L+  SGG DS+   +       +R   +  D+G   K E +  +   K          
Sbjct: 220 KVLVGVSGGVDSTVVAALMHRAIGERSTAVLIDHGLMRKNEAKNCVSALK---------D 270

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 H    + +     S +T       ++           +   +         L  
Sbjct: 271 GLKVNIHCYDESNIFLSKLSDITDP-----EEKRKIIGNQFIYSFDRISGELGEMQFLAQ 325

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+  S         I++      L       +  PL  L K E   + +++G
Sbjct: 326 GTLYPDVIESGVS--KGKSAHMIKSHHNVGGLPKNMTFELVEPLRELFKDEVRNVGRELG 383

Query: 189 GQDLVN 194
             + + 
Sbjct: 384 LPESLI 389


>gi|297158199|gb|ADI07911.1| GMP synthase [Streptomyces bingchenggensis BCW-1]
          Length = 528

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 58/187 (31%), Gaps = 11/187 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              A+   SGG DS+   +       D++  +  D+G   K E E          ++   
Sbjct: 223 TKRAICGLSGGVDSAVAAALVQRAIGDQLTCVYVDHGLMRKGESE----------QVEKD 272

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  + G    +  A    ++  +   +   K +        V  +    LV  A  A   
Sbjct: 273 FVAATGVQLKVVDAEERFLTALAGVSDPEEKRKIIGREFIRVFEQAQAELVAEAGAAGEA 332

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +               I++      L  +    +  PL  L K E   + Q+
Sbjct: 333 VEFLVQGTLYPDVVESGGGTGAANIKSHHNVGGLPDDLEFQLIEPLRRLFKDEVRMVGQE 392

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 393 LGLPEEI 399


>gi|328884512|emb|CCA57751.1| GMP synthase [Streptomyces venezuelae ATCC 10712]
          Length = 533

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 57/187 (30%), Gaps = 11/187 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              A+   SGG DS+   +        ++  +  D+G   K E E          ++   
Sbjct: 228 TKRAVCGLSGGVDSAVAAALVQKAIGSQLTCVYVDHGLMRKGETE----------QVEKD 277

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  S G +  +  A    ++  +   +   K +        V  +    +V  +      
Sbjct: 278 FVASTGVNLKVVDAQERFLTALAGVSDPETKRKIIGREFIRVFEQAQAEIVAESAGTGED 337

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +               I++      L  +    +  PL  L K E   + Q+
Sbjct: 338 VAFLVQGTLYPDIVESGGGTGTANIKSHHNVGGLPEDLEFELVEPLRQLFKDEVRMVGQE 397

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 398 LGLPEEI 404


>gi|303241870|ref|ZP_07328364.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acetivibrio cellulolyticus CD2]
 gi|302590544|gb|EFL60298.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acetivibrio cellulolyticus CD2]
          Length = 360

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 52/196 (26%), Gaps = 8/196 (4%)

Query: 7   KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE---LECRLCVRKKIVE 62
               ++++  SGG DSS   +  L++   V  ++       K E    E   C    + +
Sbjct: 1   MTKKSVMIGMSGGVDSSVAAAVLLEKGYDVIGVTMQIWPETKEEVKLTEGGCCSLSAVDD 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                       ++L    + +    +   +  +K +  N             L+  A  
Sbjct: 61  ARGVANSLGIPYYVLNFKEVFEEKVINYFIDEYLKGKTPNPCIACNRHVKFESLLSKAVS 120

Query: 123 A----YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
                   G   I+                          NL  +    V  P+    K 
Sbjct: 121 MGLDYVATGHYAIIEYDENRKRYLLKKSVTQQKDQTYALYNLTQDQLSKVLMPIGNYSKD 180

Query: 179 ETWKLAQDIGGQDLVN 194
              + A ++G      
Sbjct: 181 VVRQKAAELGLCVASK 196


>gi|295110441|emb|CBL24394.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ruminococcus obeum A2-162]
          Length = 373

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 46/190 (24%), Gaps = 10/190 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
               A++  SGG DSS      +         +   Y          R C      E   
Sbjct: 1   MQKKAMIAMSGGVDSSVAAYLMVQNGYDCAGATLKLYDNPQCSFPGHRACCTPSDTEDAR 60

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                LG  + +    + D    S+    A        PN  +     +        A  
Sbjct: 61  SVAARLGMLYYVF--PMHDEFRHSVIDKFADTYLHGGTPNPCIDCNRFLKFSALLDKARE 118

Query: 126 LGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWLKKY 178
           LG   I  G            R         T         +  +       PL    K 
Sbjct: 119 LGCEYIASGHYARREQDPETGRFILKKGLDPTKDQSYVLYAMTQDQLAHTLFPLGGYTKK 178

Query: 179 ETWKLAQDIG 188
           E   +AQ+ G
Sbjct: 179 EIRHIAQEQG 188


>gi|291545182|emb|CBL18291.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ruminococcus sp. 18P13]
          Length = 359

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 53/190 (27%), Gaps = 12/190 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIVELMP 65
              ++  SGG DSS            V  ++   F      +     R C   + VE   
Sbjct: 2   KKVMIGMSGGVDSSVAALRLQQEGYDVTGVTLKLFGDEDIIQAPDATRTCCALRDVEDAR 61

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                LG +H++      D   S + +           PN  +     I        A  
Sbjct: 62  SVAYRLGFEHLVF--NFKDAFRSHVMQPFCDSYLRGETPNPCIDCNRHIKFDAMLRRAEA 119

Query: 126 LGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWLKKY 178
           LG   I  G            R+        +        NL          PL  L+K 
Sbjct: 120 LGYDYIATGHYAVRRQDPATGRYLLCRPKDRSKDQTYVLYNLTQHQLAHTLFPLGDLEKA 179

Query: 179 ETWKLAQDIG 188
           +  ++A+  G
Sbjct: 180 QVRQMAEAAG 189


>gi|160931216|ref|ZP_02078618.1| hypothetical protein CLOLEP_00053 [Clostridium leptum DSM 753]
 gi|156869771|gb|EDO63143.1| hypothetical protein CLOLEP_00053 [Clostridium leptum DSM 753]
          Length = 357

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 50/190 (26%), Gaps = 8/190 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK-KIVELMP 65
                +L  SGG DSS      L +   V  ++        +             ++   
Sbjct: 1   MKKKVMLGMSGGVDSSVAALLLLQQGYDVTGVTMKLRPDQYMAESQSGGCCSLDDIDDAR 60

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +    LG +H++       +    +    A +      PN  +     +        A  
Sbjct: 61  RVAYRLGIEHLV--LNFTQVFSEKVIDYFASEYLAGRTPNPCIACNAHVKFDALLRKALS 118

Query: 126 LGITNIVIGVCETDYSGYP-----DCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           L    +  G                    +        +L          PL  ++K E 
Sbjct: 119 LEYDYVATGHYAVITQNDEGRWLLKKAPCSKDQSYVLYHLTQHQLAHTLMPLAGMEKSEA 178

Query: 181 WKLAQDIGGQ 190
            +LA++ G  
Sbjct: 179 RELAREAGLP 188


>gi|138896133|ref|YP_001126586.1| tRNA-specific 2-thiouridylase MnmA [Geobacillus thermodenitrificans
           NG80-2]
 gi|196250086|ref|ZP_03148780.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Geobacillus sp. G11MC16]
 gi|166234855|sp|A4IR87|MNMA_GEOTN RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|134267646|gb|ABO67841.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Geobacillus thermodenitrificans NG80-2]
 gi|196210270|gb|EDY05035.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Geobacillus sp. G11MC16]
          Length = 371

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 53/193 (27%), Gaps = 11/193 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN    +    ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MNKAPHET-RVVVGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            +      + +    PN  V     I      
Sbjct: 58  EDVVRVCNQIGIPYYAVN---FEKQYWDKVFTYFLNEYKAGRTPNPDVMCNKEIKFKAFL 114

Query: 121 TLAYRLGITNIVIGVCET---DYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWL 175
             A  +G   +  G           Y   R       +T     LG      V  P+  L
Sbjct: 115 EHAMSIGADYVATGHYARVEFRDGEYKMLRGADPNKDQTYFLNQLGQAQLSKVMFPIGHL 174

Query: 176 KKYETWKLAQDIG 188
           +K +  ++A++ G
Sbjct: 175 QKADVRRIAKEAG 187


>gi|325529396|gb|EGD06318.1| hypothetical protein B1M_02050 [Burkholderia sp. TJI49]
          Length = 468

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 57/220 (25%), Gaps = 20/220 (9%)

Query: 13  LLFSGGQDSS--TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           + FS G DS     L         V  +  D           R    +    L  +  + 
Sbjct: 151 VPFSHGLDSYGQVRLWQREHPDTEVVCVFAD----------ARTSGVENGNGLKRRTSEH 200

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           +    +    +       +     +       L            ++        +G + 
Sbjct: 201 IQYMRV---PVSVKPMRRAEPSFRSRPFMFYLLAALGAVESGTNKVMIPENGQGSIGGSL 257

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S YP         +   +       V  + P ++  K    +   D G  
Sbjct: 258 IVTGHEAKHRSCYPGFT----AKLSRFVEALTGKRVKFYHPALFETKGAVLRALADAGED 313

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
               L    S +C   +   R +  + C  C  C LR+  
Sbjct: 314 VRAVLGRHRSCSC-DARLTSRDKQMFHCGVCGNCLLRRAA 352


>gi|323486116|ref|ZP_08091447.1| hypothetical protein HMPREF9474_03198 [Clostridium symbiosum
           WAL-14163]
 gi|323692975|ref|ZP_08107196.1| GMP synthase domain-containing protein [Clostridium symbiosum
           WAL-14673]
 gi|323400683|gb|EGA93050.1| hypothetical protein HMPREF9474_03198 [Clostridium symbiosum
           WAL-14163]
 gi|323502976|gb|EGB18817.1| GMP synthase domain-containing protein [Clostridium symbiosum
           WAL-14673]
          Length = 430

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 55/182 (30%), Gaps = 20/182 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +  +     ++  +  ++G   K E E  + V +  +     + 
Sbjct: 137 KVLLALSGGVDSSVVAALLIKAIGQQLVCVHVNHGLMRKNESESVIEVFRNQLHANLIYV 196

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D+           LG + + S  +     I    +       R +             GI
Sbjct: 197 DAA-------ERFLGKLENVSDPEQKRKIIGGEFIRVFEEEARKL------------EGI 237

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G    D           +++      L  +    +  PL  L K E      ++G
Sbjct: 238 DFLGQGTIYPDIIESGTKTAKMVKSHHNVGGLPEDLKFELVEPLKQLFKDEVRACGLELG 297

Query: 189 GQ 190
             
Sbjct: 298 LP 299


>gi|289624958|ref|ZP_06457912.1| argininosuccinate synthase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|330867248|gb|EGH01957.1| argininosuccinate synthase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 405

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 59/205 (28%), Gaps = 13/205 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +         + T      +   ++    +  R I         A
Sbjct: 61  ------YIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN------LGMESHVTVHTPLMWLKK 177
              G T         +   Y       + A     +      L   +           KK
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHNIPIERHGKK 174

Query: 178 YETWKLAQDIGGQDLVNLILEESHT 202
              + +  ++        +LE++ T
Sbjct: 175 KSPYSMDANLLHISYEGGVLEDTWT 199


>gi|261856534|ref|YP_003263817.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Halothiobacillus neapolitanus c2]
 gi|261837003|gb|ACX96770.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Halothiobacillus neapolitanus c2]
          Length = 377

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 51/188 (27%), Gaps = 14/188 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS      ++   +VE L     + +  +  C       +++ +     
Sbjct: 13  RVIVGLSGGVDSSVAALRLIEAGYQVEGLFMKNWEGDDNDEYCAAKA--DMLDALSVADR 70

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E H +      D         +             +  R  I        A  LG  
Sbjct: 71  LGIEFHFVN--FAQDYWDRVFAHFLDEYRAGRTPNPDILCNRE-IKFRAFLDHARTLGAD 127

Query: 130 NIVIGVCETDYSGYPDCR---------HDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            I  G         PD                       L  E   +   P+  ++K E 
Sbjct: 128 YIATGHYARVQHALPDDSGETCLLKGLDANKDQSYFLHALSREQLASALFPIGEMEKPEV 187

Query: 181 WKLAQDIG 188
            ++A+  G
Sbjct: 188 RRIAEQAG 195


>gi|303244455|ref|ZP_07330790.1| PP-loop domain protein [Methanothermococcus okinawensis IH1]
 gi|302485153|gb|EFL48082.1| PP-loop domain protein [Methanothermococcus okinawensis IH1]
          Length = 330

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 65/225 (28%), Gaps = 11/225 (4%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDY---GQRNKVELECRL 54
             II      ++  SGG+DS   L             +  ++ D    G R        +
Sbjct: 69  YKIINPKDKIIVGLSGGKDSLALLHLLEPYRRRYGIEIYAITIDLNINGIRPWSSDNKNM 128

Query: 55  CVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII 114
              KK  E +      +G D    +  +  I   +            ++   ++     +
Sbjct: 129 ASIKKHCENLNIPHKIIGFDK--DVVEMSKILSENTKGIEYSPCFSCSVVRRYILTNFAM 186

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIR--AIETAINLGMESHVTVHTPL 172
            L+   T    +    I +G    D S                  +    E+        
Sbjct: 187 KLLEVNTNNIDINKIKICLGHTLEDNSDTILANILKGDVIKTLEPLKNFEEAVFDFKEFK 246

Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
           + L+K    +    +  ++++  + E S + Y  K +  Y    G
Sbjct: 247 LKLQKSTIIRPLLSVSEKEIIKALNECSISYYRDKDECPYSRDKG 291


>gi|293390004|ref|ZP_06634338.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290950538|gb|EFE00657.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 485

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 54/182 (29%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       L R  RV    F+ G            +  K +     W+  
Sbjct: 180 VLSLISGGFDSGVSSYMLLRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWQRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + +NV        L    V   + I        A R  I  
Sbjct: 232 GSSHKVRFVAINFEGVVGEILENVDNGQMGVVLKRMMVRAASKI--------AQRFDIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I              V V  PL+   K +   +A+ IG  
Sbjct: 284 IVTGEVLGQVSSQTLTNLRLIDEAAE---------VLVLRPLITHDKEQIIVMAKHIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|239906875|ref|YP_002953616.1| GMP synthase [Desulfovibrio magneticus RS-1]
 gi|259647678|sp|C4XSN8|GUAA_DESMR RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|239796741|dbj|BAH75730.1| GMP synthase [Desulfovibrio magneticus RS-1]
          Length = 516

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 48/185 (25%), Gaps = 18/185 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+            ++  +  D G     E E    V   + E       
Sbjct: 222 VVCALSGGVDSTVVAVMLHKAIGKKLHCIFVDNGLLRMGEGE---EVAAYLREHFDLNLH 278

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +    +    + G        K +     +                   A    ++   
Sbjct: 279 YVDAAKLFLDKLAGVTDPEEKRKIIGKTFIEVFEVE--------------AAKLPKVKYL 324

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                  +   S         I++      L     + +  PL  L K E  K+A ++G 
Sbjct: 325 AQGTLYPDVIESVSFKGPSAVIKSHHNVGGLPEVMKLALIEPLRELFKDEVRKVAVELGM 384

Query: 190 QDLVN 194
            D + 
Sbjct: 385 PDFII 389


>gi|89054998|ref|YP_510449.1| tRNA-specific 2-thiouridylase MnmA [Jannaschia sp. CCS1]
 gi|122498420|sp|Q28PD8|MNMA_JANSC RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|88864547|gb|ABD55424.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Jannaschia sp. CCS1]
          Length = 380

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 47/186 (25%), Gaps = 10/186 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +   D    V  ++   Y     +  +   C  + I +     +
Sbjct: 22  RVVVAMSGGVDSSAVAAQLADEGYDVVGVTLQLYDHGAALAKKGACCAGRDIHDAARVAE 81

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL-- 126
                 ++L       +   ++    A        P   +     +        A  L  
Sbjct: 82  TMGFPHYVLDYEN---VFKDAVIDEFADSYLAGATPVPCIRCNERVKFKDLLETAKDLDA 138

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL----KKYETWK 182
                   +         +       A + +  L       +      L     K ET  
Sbjct: 139 DCMATGHYIQRKMGREKAELHSAADAARDQSYFLFSTKQEQLDFLRFPLGHLESKAETRA 198

Query: 183 LAQDIG 188
           LA   G
Sbjct: 199 LAAKYG 204


>gi|313201356|ref|YP_004040014.1| argininosuccinate synthase [Methylovorus sp. MP688]
 gi|312440672|gb|ADQ84778.1| argininosuccinate synthase [Methylovorus sp. MP688]
          Length = 407

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 49/157 (31%), Gaps = 7/157 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  ++E        KK   +
Sbjct: 1   MSDVKKVVLAYSGGLDTSVILKWLQDTYQCEVVTFTADLGQGEELEP--AREKAKKFG-V 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + D L E+ +            + T      +   ++    +  R I         A
Sbjct: 58  KEIYIDDLREEFVRDFVF---PMFRANTVYEGEYLLGTSIARPLIAKRLIDIANETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         +   Y       + A     +L
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDL 151


>gi|331214035|ref|XP_003319699.1| argininosuccinate synthase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309298689|gb|EFP75280.1| argininosuccinate synthase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 432

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 44/187 (23%), Gaps = 16/187 (8%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           ++      LL +SGG D+S  L+W +++   V     D GQ  + + +       K+   
Sbjct: 1   MVSSQGRVLLAYSGGLDTSCILAWLIEQGYEVVAFMADVGQ--EEDFKAAEAKALKVGA- 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                          L  L     + L                         +      A
Sbjct: 58  -----------KKFVLKDLKREFVTELITPAVQANCIYEGVYLLGTSLARPVIARGMIEA 106

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
                   V   C    +            + +   +        +         +  K 
Sbjct: 107 ATTEQCAFVSHGCTGKGNDQVRFELAFYALVPSIKVIAPWRLPEFYNRFAGRS--DLLKY 164

Query: 184 AQDIGGQ 190
           A + G  
Sbjct: 165 AAEKGIP 171


>gi|14591705|ref|NP_143793.1| hypothetical protein PH1968 [Pyrococcus horikoshii OT3]
 gi|3258412|dbj|BAA31095.1| 273aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 273

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 1/92 (1%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELM 64
            K   A++ +SGG+DS   L  A +++   VE +  D+G      ++    V K +   +
Sbjct: 50  SKVDKAIVAYSGGKDSIVALYLAKEKYSIDVEAVMVDHGFIAPQAIKNAKNVAKYLDVPL 109

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAM 96
              K    +     L            + + +
Sbjct: 110 TIIKRDYSDIFREALLKAKSPCRKCSRRTMEI 141


>gi|167807|gb|AAA33213.1| GMP synthetase [Dictyostelium discoideum]
          Length = 718

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 54/195 (27%), Gaps = 6/195 (3%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKI 60
             I      L+L SGG DS+ C +        + V  L  D G   K E          +
Sbjct: 262 KSIVSNKKVLVLVSGGVDSTVCAALISKAIGPENVIALHIDNGFMRKDESLNVEKALSVL 321

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
              +        +        +     SSL + ++ + +   + +TF+            
Sbjct: 322 G--LHLIVVDASQTFYNSTTTIKGHLTSSLKETISPEERRKIIGDTFMRVAENEVKKLGL 379

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKY 178
                      +        S       D I+       L         V  PL    K 
Sbjct: 380 QPEDVYLAQGTLRPDLIESSSKTVSGVADVIKTHHNDTELVRILRDSGRVVEPLKDYHKD 439

Query: 179 ETWKLAQDIGGQDLV 193
           E  +L + +G  D +
Sbjct: 440 EVRELGKSLGLSDSL 454


>gi|66812710|ref|XP_640534.1| GMP synthetase [Dictyostelium discoideum AX4]
 gi|161783815|sp|P32073|GUAA_DICDI RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|60468534|gb|EAL66537.1| GMP synthetase [Dictyostelium discoideum AX4]
          Length = 718

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 54/195 (27%), Gaps = 6/195 (3%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKI 60
             I      L+L SGG DS+ C +        + V  L  D G   K E          +
Sbjct: 262 KSIVSNKKVLVLVSGGVDSTVCAALISKAIGPENVIALHIDNGFMRKDESLNVEKALSVL 321

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
              +        +        +     SSL + ++ + +   + +TF+            
Sbjct: 322 G--LHLIVVDASQTFYNSTTTIKGHLTSSLKETISPEERRKIIGDTFMRVAENEVKKLGL 379

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKY 178
                      +        S       D I+       L         V  PL    K 
Sbjct: 380 QPEDVYLAQGTLRPDLIESSSKTVSGVADVIKTHHNDTELVRILRDSGRVVEPLKDYHKD 439

Query: 179 ETWKLAQDIGGQDLV 193
           E  +L + +G  D +
Sbjct: 440 EVRELGKSLGLSDSL 454


>gi|295425130|ref|ZP_06817835.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus amylolyticus DSM 11664]
 gi|295065189|gb|EFG56092.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus amylolyticus DSM 11664]
          Length = 375

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 47/189 (24%), Gaps = 11/189 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
            K    ++  SGG DSS        +   V  +             C     +   ++  
Sbjct: 4   NKKKRVVVGMSGGVDSSVSALLLKQQGYDVIGVFMKNWDDTDDAGVC--TATEDYEDVKK 61

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    + +            + +    + +    PN  V   + I        A  
Sbjct: 62  VADKIGIPYYSIN---FEKEYWHRVFEYFLNEYKKGRTPNPDVMCNSQIKFKSFLEFAMD 118

Query: 126 LGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYE 179
           L    I +G                R       +T     L  E    V  PL  L K +
Sbjct: 119 LDADYIAMGHYAKTVKDENGIVHMMRPKDGNKDQTYFLSQLSQEQIKKVIFPLADLTKPQ 178

Query: 180 TWKLAQDIG 188
             ++A   G
Sbjct: 179 VREIALANG 187


>gi|253999267|ref|YP_003051330.1| argininosuccinate synthase [Methylovorus sp. SIP3-4]
 gi|253985946|gb|ACT50803.1| argininosuccinate synthase [Methylovorus sp. SIP3-4]
          Length = 407

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 49/157 (31%), Gaps = 7/157 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  ++E        KK   +
Sbjct: 1   MSDVKKVVLAYSGGLDTSVILKWLQDTYQCEVVTFTADLGQGEELEP--AREKAKKFG-V 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + D L E+ +            + T      +   ++    +  R I         A
Sbjct: 58  KEIYIDDLREEFVRDFVF---PMFRANTVYEGEYLLGTSIARPLIAKRLIDIANETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         +   Y       + A     +L
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDL 151


>gi|328472525|gb|EGF43388.1| tRNA s(4)U8 sulfurtransferase [Vibrio parahaemolyticus 10329]
          Length = 482

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  +V    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGP-------AHEI--GVKQVSHYLWNK 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G       +       S   + V  +I +             +F+  A  +A +  I  
Sbjct: 231 YG-------SSAKVRFISVDFEPVVAEILEKVDDGQMGVILKRMFMRAAGMIAEKFKIEA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K +   LA++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIINLAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|325979485|ref|YP_004289201.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
 gi|325179413|emb|CBZ49457.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
          Length = 373

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 50/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A  LG   +  G             H    A            L  E    V  PL  
Sbjct: 114 DYAMTLGADYVATGHYAQVSRDEDGTVHMLRGADNNKDQTYFLSQLSQEQLQKVMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  K+A+  G
Sbjct: 174 LEKPEVRKIAERAG 187


>gi|313899166|ref|ZP_07832687.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium sp. HGF2]
 gi|312956035|gb|EFR37682.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium sp. HGF2]
          Length = 393

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/197 (12%), Positives = 53/197 (26%), Gaps = 12/197 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-----QRNKVELECRLCV 56
             ++  +   LL  SGG DS+       ++   V                      +  V
Sbjct: 3   RQVMNMSQKVLLGLSGGVDSAVAAYLLKEQGYDVTCAFMRNWDSFANNDIMGNPTIQDDV 62

Query: 57  R-KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
             ++   L  K         +L +  + +      T  +    +        +     I 
Sbjct: 63  CPQEQDYLDAKAVADKLGLPLLRVDFVKEYWDHVFTYFLEEYRKGRTPNPDILC-NKYIK 121

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRH-----DTIRAIETAINLGMESHVTVHT 170
                  A RLG   +  G          + R      +          +  ++      
Sbjct: 122 FDAFMDYARRLGFDTLATGHYAQVDHSAEESRMLRGADNNKDQTYFLCQVSQDALRHSMF 181

Query: 171 PLMWLKKYETWKLAQDI 187
           P+  ++K E  ++A+ +
Sbjct: 182 PIGHMEKQEVREIAERM 198


>gi|296124394|ref|YP_003632172.1| argininosuccinate synthase [Planctomyces limnophilus DSM 3776]
 gi|296016734|gb|ADG69973.1| argininosuccinate synthase [Planctomyces limnophilus DSM 3776]
          Length = 404

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 41/148 (27%), Gaps = 5/148 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           PS +L +SGG D+S  L W  D    V  +  D GQ    + E  L           +  
Sbjct: 2   PSCVLAYSGGLDTSVILGWLQDEGYDVHCVYVDVGQ-PCEDREAILKKAHDCGAKSARIV 60

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D+  E                  K   + +   ++    +    +         AY  G 
Sbjct: 61  DAQEEMCR----DFAFPVLQWQAKYENIYLLGTSIARPLISKVCLQVCREVGADAYAHGA 116

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIET 156
           T      C    +         I A   
Sbjct: 117 TGKGNDQCRFQLAAEALNPDIKIIAPWR 144


>gi|218281120|ref|ZP_03487655.1| hypothetical protein EUBIFOR_00214 [Eubacterium biforme DSM 3989]
 gi|218217634|gb|EEC91172.1| hypothetical protein EUBIFOR_00214 [Eubacterium biforme DSM 3989]
          Length = 385

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 58/188 (30%), Gaps = 10/188 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWK 68
             L+  SGG DS+        +   V      ++      ++     ++         + 
Sbjct: 2   KVLVGLSGGVDSAVAAYLLKKQGYDVTCCFMRNWDSFANNDIAGNPTIKDDTCPQEQDYL 61

Query: 69  DSLGEDHILPLA----ILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
           D+L   + L L        +    ++ K    + +    PN  +     I        A 
Sbjct: 62  DALAVANHLDLPLQRVDFIEEYWDNVFKTFLSEYEKGRTPNPDILCNKYIKFDSFFEYAM 121

Query: 125 RLGITNIVIGVCETDY--SGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYE 179
           + G   +  G   ++   +G+        +  +    L       +     PL  L+K E
Sbjct: 122 KQGFDKVATGHYASNAEENGFTYLTRAKDQNKDQTYFLCQVEKSKIAKTIFPLAHLEKPE 181

Query: 180 TWKLAQDI 187
             ++A ++
Sbjct: 182 IRQIAAEL 189


>gi|153840266|ref|ZP_01992933.1| thiamine biosynthesis/tRNA modification protein ThiI [Vibrio
           parahaemolyticus AQ3810]
 gi|149746068|gb|EDM57198.1| thiamine biosynthesis/tRNA modification protein ThiI [Vibrio
           parahaemolyticus AQ3810]
          Length = 366

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  +V    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGP-------AHEI--GVKQVSHYLWNK 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G       +       S   + V  +I +             +F+  A  +A +  I  
Sbjct: 231 YG-------SSAKVRFISVDFEPVVAEILEKVDDGQMGVILKRMFMRAAGMIAEKFKIEA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K +   LA++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIINLAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|154484582|ref|ZP_02027030.1| hypothetical protein EUBVEN_02298 [Eubacterium ventriosum ATCC
           27560]
 gi|149734430|gb|EDM50347.1| hypothetical protein EUBVEN_02298 [Eubacterium ventriosum ATCC
           27560]
          Length = 358

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 48/189 (25%), Gaps = 12/189 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR--KKIVELMPK 66
             AL+  SGG DSS    +  ++      ++        + +           + +    
Sbjct: 2   KKALIAMSGGVDSSVAAVFMKEKGYDPIGVTMKLYDNEDINMSKEKTCCSLSDVEDARSV 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   ++             +             PN  +     +        A  L
Sbjct: 62  AYKVGFPYYVFN---FKAEFKEKVIDKFVGCYMCGMTPNPCIDCNRYLKFEELYRRAKAL 118

Query: 127 GITNIVIGVCET----DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL---KKYE 179
           G   IV G        + +G          + + +  L   +   +   +  L    K E
Sbjct: 119 GCDVIVTGHYARIRFDEATGKYQLMKGIDDSKDQSYVLYHMTQEQLAHTMFPLGEYTKDE 178

Query: 180 TWKLAQDIG 188
             K A + G
Sbjct: 179 IRKKAAETG 187


>gi|58039815|ref|YP_191779.1| tRNA-specific 2-thiouridylase MnmA [Gluconobacter oxydans 621H]
 gi|58002229|gb|AAW61123.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Gluconobacter oxydans 621H]
          Length = 355

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 52/183 (28%), Gaps = 15/183 (8%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
            SGG DSS   +    +   V   +   +D+GQ  K    C       I++         
Sbjct: 1   MSGGVDSSVVAALLKRQGHEVIGATLQLYDHGQAAKPGACCAGR---DIMDARAVADRLG 57

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
              +++           S+ ++ A        P   V     +       +A  LG   +
Sbjct: 58  FPHYVID---AESRFRDSVVESFADAYARGETPVPCVACNQGVKFTDLLGMARDLGCEAM 114

Query: 132 -----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL-KKYETWKLAQ 185
                V  V   + +                     +    +  PL  +  K     LAQ
Sbjct: 115 ATGHYVRRVEGPEGAEMHRPVDAERDQTWFLFATTKDQLDYLRFPLGEMPDKAHVRALAQ 174

Query: 186 DIG 188
           ++G
Sbjct: 175 ELG 177


>gi|28897465|ref|NP_797070.1| thiamine biosynthesis protein ThiI [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260876426|ref|ZP_05888781.1| thiamine biosynthesis/tRNA modification protein ThiI [Vibrio
           parahaemolyticus AN-5034]
 gi|31077023|sp|Q87RT6|THII_VIBPA RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|28805677|dbj|BAC58954.1| thiamin biosynthesis protein ThiI [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308093006|gb|EFO42701.1| thiamine biosynthesis/tRNA modification protein ThiI [Vibrio
           parahaemolyticus AN-5034]
          Length = 482

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  +V    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGP-------AHEI--GVKQVSHYLWNK 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G       +       S   + V  +I +             +F+  A  +A +  I  
Sbjct: 231 YG-------SSAKVRFISVDFEPVVAEILEKVDDGQMGVILKRMFMRAAGMIAEKFKIEA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K +   LA++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIINLAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|330957746|gb|EGH58006.1| argininosuccinate synthase [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 405

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 59/205 (28%), Gaps = 13/205 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +         + T      +   ++    +  R I         A
Sbjct: 61  ------YIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN------LGMESHVTVHTPLMWLKK 177
              G T         +   Y       + A     +      L   +           KK
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHNIPIERHGKK 174

Query: 178 YETWKLAQDIGGQDLVNLILEESHT 202
              + +  ++        +LE++ T
Sbjct: 175 KSPYSMDANLLHISYEGGVLEDTWT 199


>gi|288906423|ref|YP_003431645.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus gallolyticus UCN34]
 gi|288733149|emb|CBI14730.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus gallolyticus UCN34]
          Length = 373

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 50/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A  LG   +  G             H    A            L  E    V  PL  
Sbjct: 114 DYAMTLGADYVATGHYAQVSRDEDGTVHMLRGADNNKDQTYFLSQLSQEQLQKVMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  K+A+  G
Sbjct: 174 LEKPEVRKIAERAG 187


>gi|242239492|ref|YP_002987673.1| tRNA-specific 2-thiouridylase MnmA [Dickeya dadantii Ech703]
 gi|242131549|gb|ACS85851.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Dickeya dadantii Ech703]
          Length = 370

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 56/192 (29%), Gaps = 11/192 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +VE L        + + +   C     
Sbjct: 1   MSD--NSQKKVIVGMSGGVDSSVSAYLLQQQGYQVEGLFMKNW---EEDDDTEYCSAAAD 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           +       D LG + +  +    +   +     +A            +  + I F  F  
Sbjct: 56  LADAQAVCDKLGIE-LHTVNFAAEYWDNVFEHFLAEYRAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  L    I  G            R      +          L  E       P+  L
Sbjct: 115 FAAEDLCADYIATGHYVRRQDIAGKSRLLRGLDNNKDQSYFLYTLSHEQVAQSLFPVGEL 174

Query: 176 KKYETWKLAQDI 187
           +K +  ++A+++
Sbjct: 175 EKPQVRRIAEEL 186


>gi|195580620|ref|XP_002080133.1| GD21646 [Drosophila simulans]
 gi|194192142|gb|EDX05718.1| GD21646 [Drosophila simulans]
          Length = 677

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 55/194 (28%), Gaps = 8/194 (4%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIV-ELM 64
               LLL SGG DSS C +         ++  +  D G   K E E      + I  +L+
Sbjct: 228 NNKVLLLVSGGVDSSVCAALLRRALYPHQIIAVHVDNGFMRKKESEKVERSLRDIGIDLI 287

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP---NTFVPGRNIIFLVFAAT 121
            + +          +   G  S             +       + FV   N +       
Sbjct: 288 VRKEGYTFLKGTTQVKRPGQYSVVETPMLCQTYNPEEKRKIIGDIFVKVTNDVVAELKLK 347

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYE 179
               +     +        S       +TI+      +L  E      V  PL    K E
Sbjct: 348 PEEVMLAQGTLRPDLIESASSMVSTNAETIKTHHNDTDLIRELRNAGRVVEPLCDFHKDE 407

Query: 180 TWKLAQDIGGQDLV 193
              L  D+G    +
Sbjct: 408 VRDLGNDLGLPQEL 421


>gi|195352054|ref|XP_002042530.1| GM23268 [Drosophila sechellia]
 gi|194124399|gb|EDW46442.1| GM23268 [Drosophila sechellia]
          Length = 677

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 55/194 (28%), Gaps = 8/194 (4%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIV-ELM 64
               LLL SGG DSS C +         ++  +  D G   K E E      + I  +L+
Sbjct: 228 NNKVLLLVSGGVDSSVCAALLRRALYPDQIIAVHVDNGFMRKKESEKVERSLRDIGIDLI 287

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP---NTFVPGRNIIFLVFAAT 121
            + +          +   G  S             +       + FV   N +       
Sbjct: 288 VRKEGYTFLKGTTQVKRPGQYSVVETPMLCQTYNPEEKRKIIGDIFVKVTNDVVAELKLK 347

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYE 179
               +     +        S       +TI+      +L  E      V  PL    K E
Sbjct: 348 PEEVMLAQGTLRPDLIESASSMVSTNAETIKTHHNDTDLIRELRNAGRVVEPLCDFHKDE 407

Query: 180 TWKLAQDIGGQDLV 193
              L  D+G    +
Sbjct: 408 VRDLGNDLGLPQEL 421


>gi|281365319|ref|NP_620114.3| burgundy [Drosophila melanogaster]
 gi|21428562|gb|AAM49941.1| LD42771p [Drosophila melanogaster]
 gi|272407126|gb|AAF53975.3| burgundy [Drosophila melanogaster]
          Length = 683

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 55/194 (28%), Gaps = 8/194 (4%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIV-ELM 64
               LLL SGG DSS C +         ++  +  D G   K E E      + I  +L+
Sbjct: 228 NNKVLLLVSGGVDSSVCAALLRRALYPHQIIAVHVDNGFMRKKESEKVERSLRDIGIDLI 287

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP---NTFVPGRNIIFLVFAAT 121
            + +          +   G  S             +       + FV   N +       
Sbjct: 288 VRKEGYTFLKGTTQVKRPGQYSVVETPMLCQTYNPEEKRKIIGDIFVKVTNDVVAELKLK 347

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYE 179
               +     +        S       +TI+      +L  E      V  PL    K E
Sbjct: 348 PEEVMLAQGTLRPDLIESASSMVSTNAETIKTHHNDTDLIRELRNAGRVVEPLCDFHKDE 407

Query: 180 TWKLAQDIGGQDLV 193
              L  D+G    +
Sbjct: 408 VRDLGNDLGLPQEL 421


>gi|18461323|gb|AAL71891.1|AF015270_1 GMP synthetase [Drosophila melanogaster]
          Length = 720

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 55/194 (28%), Gaps = 8/194 (4%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIV-ELM 64
               LLL SGG DSS C +         ++  +  D G   K E E      + I  +L+
Sbjct: 228 NNKVLLLVSGGVDSSVCAALLRRALYPHQIIAVHVDNGFMRKKESEKVERSLRDIGIDLI 287

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP---NTFVPGRNIIFLVFAAT 121
            + +          +   G  S             +       + FV   N +       
Sbjct: 288 VRKEGYTFLKGTTQVKRPGQYSVVETPMLCQTYNPEEKRKIIGDIFVKVTNDVVAELKLK 347

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYE 179
               +     +        S       +TI+      +L  E      V  PL    K E
Sbjct: 348 PEEVMLAQGTLRPDLIESASSMVSTNAETIKTHHNDTDLIRELRNAGRVVEPLCDFHKDE 407

Query: 180 TWKLAQDIGGQDLV 193
              L  D+G    +
Sbjct: 408 VRDLGNDLGLPQEL 421


>gi|229591246|ref|YP_002873365.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas fluorescens SBW25]
 gi|259495834|sp|C3JY68|MNMA_PSEFS RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|229363112|emb|CAY50124.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudomonas fluorescens SBW25]
          Length = 374

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 48/187 (25%), Gaps = 10/187 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +    ++  SGG DSS      +++   VE L     + +     C       + +    
Sbjct: 10  QKKRVIVGMSGGVDSSVSAVLLMEQGYEVEGLFMKNWEEDDGTEYC--TAMDDLADAQAV 67

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H        +   +     +A            +  R  I        A  L
Sbjct: 68  CDKIGIKLHT--ANFAAEYWDNVFEHFLAEYKAGRTPNPDILCNRE-IKFKAFLDYAMML 124

Query: 127 GITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           G   I  G                              +G E       P+  L+K E  
Sbjct: 125 GADLIATGHYVRRRDIDGRTELLKGLDPNKDQSYFLHAVGGEQIAKTLFPVGELEKPEVR 184

Query: 182 KLAQDIG 188
           K+A+  G
Sbjct: 185 KIAEKHG 191


>gi|56461233|ref|YP_156514.1| thiamine biosynthesis protein ThiI [Idiomarina loihiensis L2TR]
 gi|56180243|gb|AAV82965.1| Thiamine biosynthesis protein ThiI [Idiomarina loihiensis L2TR]
          Length = 483

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 54/195 (27%), Gaps = 25/195 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           I    + L L SGG DS       + R  R     F+ G            +   +    
Sbjct: 176 IPTQETVLSLLSGGFDSGVATYDFIRRGARTHFCFFNLGGDA--HEVAVRQIAYYL---- 229

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             WK       I  +++        +  NV        L            L  A  +A 
Sbjct: 230 --WKRYSSSHPIKFISVDFAPIVDDILTNVDNGQMGVVLKRQM--------LRAADKVAR 279

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            +    +V G      S         I    +A+         V  PL+   K E    A
Sbjct: 280 YVKAQALVTGEAMGQVSSQTLSNLRVIDQATSAL---------VLRPLITKDKQEIVDEA 330

Query: 185 QDIGGQDLVNLILEE 199
           + IG + L   I E 
Sbjct: 331 KRIGTEPLAKSIPEY 345


>gi|289523006|ref|ZP_06439860.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289503549|gb|EFD24713.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 351

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 50/186 (26%), Gaps = 8/186 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +   SGG DSS  LS    +   V          ++ +++    V + +         
Sbjct: 6   RIITAISGGIDSSLALSLLAKQGHEVVGCFLVMSDGHEEDVDRARKVCELLKVPFYAIDI 65

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                  + + ++     S+          + N+    +      +        +   I 
Sbjct: 66  REKFQSEVIMPLITSY--SNGKTPNPCVFCNPNVKFKTLFDLLNCYNSDFVATGHYAKIY 123

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
              +             +   +  +             V  PL  L K E  K A++I G
Sbjct: 124 KDDLNYHLVRGRDPKKEQSYMLYRLPKNWLSS------VIFPLGDLTKAEVKKKAREIFG 177

Query: 190 QDLVNL 195
               ++
Sbjct: 178 NIFDDV 183


>gi|315927736|gb|EFV07063.1| Putative tRNA-5-methylaminomethyl-2-thiouridylate-methyltransferase
           [Campylobacter jejuni subsp. jejuni DFVF1099]
          Length = 269

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 41/171 (23%), Gaps = 10/171 (5%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DS+       +    V          +         ++K    +           
Sbjct: 1   MSGGVDSTVTAYKLKNLGHEVIGCYMK---LHGKPNYHEENIKK----VEKVANFLQIPY 53

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
           HIL    L +   + +        ++   PN        I L      A  LG   +  G
Sbjct: 54  HILD---LQEDFKNKVYMPFVDTYKEGKTPNPCALCNRFIKLGKLLEFAKSLGCEKLATG 110

Query: 135 VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                 +       D  +     +    +  +      +   K E  K   
Sbjct: 111 HYARLENNLIKTAVDESKDQSYFLASADKEALKYLIFPLGEMKKEDVKKFA 161


>gi|225849269|ref|YP_002729433.1| tRNA methyl transferase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644241|gb|ACN99291.1| tRNA methyl transferase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 349

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/130 (11%), Positives = 34/130 (26%), Gaps = 11/130 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK----KIVE 62
               A+ L+SGG DS+  +    ++   +  + F  G         R   ++     +  
Sbjct: 1   MKRKAVALYSGGLDSTLAIRLIQNQGIDILAVHFYTGFCITETKRRRGEKKEDGTHYMNP 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
            +           I+ ++             +                  I     A  +
Sbjct: 61  ALKYAAKYGFPLEIVDISD-------GYMDVILNPKYGYGANINPCIDCRIYMFKKAKQI 113

Query: 123 AYRLGITNIV 132
              +G   I+
Sbjct: 114 MEEIGADFII 123


>gi|251792601|ref|YP_003007327.1| thiamine biosynthesis protein ThiI [Aggregatibacter aphrophilus
           NJ8700]
 gi|247533994|gb|ACS97240.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Aggregatibacter aphrophilus NJ8700]
          Length = 482

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 54/182 (29%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       L R  RV    F+ G            +  K +     W+  
Sbjct: 180 VLSLISGGFDSGVSSYMLLRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWQRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + +NV        L    V   + +        A R  I  
Sbjct: 232 GSSHKVRFVAINFEGVVGEILENVDNGQMGVVLKRMMVRAASKV--------AQRFDIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I              V V  PL+   K +   LA+ IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDEAAE---------VLVLRPLITHDKEQIIALAKHIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|308234263|ref|ZP_07665000.1| GMP synthase, large subunit [Atopobium vaginae DSM 15829]
 gi|328943814|ref|ZP_08241279.1| GMP synthase [Atopobium vaginae DSM 15829]
 gi|327491783|gb|EGF23557.1| GMP synthase [Atopobium vaginae DSM 15829]
          Length = 538

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 50/186 (26%), Gaps = 16/186 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS   +        ++  +  ++G   K E E    V +K        
Sbjct: 229 KKVILALSGGVDSSVVAALVHRAIGKQLTCVFVNHGLLRKGEPELVEEVFRK-------- 280

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    + L  +      +       + ++          +              L 
Sbjct: 281 ------QFDVDLVHVHAEERYAKLLEGVSEPEEKRKRIGTEFWKVFFEQAQKIGDVQFL- 333

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
               +        +     +  TI++    I      H  +  PL    K E  +L   +
Sbjct: 334 AQGTIYPDIIESGARKTGGKASTIKSHHNLIPFPEGIHFDLIEPLDHFFKDEVRELGLAL 393

Query: 188 GGQDLV 193
           G  + +
Sbjct: 394 GLPEKM 399


>gi|145630743|ref|ZP_01786521.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae R3021]
 gi|144983625|gb|EDJ91085.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae R3021]
          Length = 381

 Score = 53.4 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W+  
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------AAHEIGVKQMAY-HIWQRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + + V        L    V   + +        A R  I  
Sbjct: 232 SSSHKVRFIAINFEGVVGEILEKVDNGQMGVVLKRMMVRAASKV--------AQRFNIEA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I     A+         V  PL+   K +   +A++IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDEAADAL---------VLRPLITHDKEQIIAMAKEIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|327439665|dbj|BAK16030.1| predicted tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase [Solibacillus silvestris StLB046]
          Length = 372

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 48/185 (25%), Gaps = 12/185 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS        +   V  +   ++   ++  +         ++ +  +  
Sbjct: 11  RVVIGMSGGVDSSVAAYLLKQQGYDVIGIFMKNWDDTDEFGVCTATEDYDDVIAVCNQIG 70

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                     +           T  +             +     I        A  LG 
Sbjct: 71  IPYYA-----VNFEKQYWDKVFTYFLEEYKAGRTPNPDVMC-NKEIKFKAFLEHALALGA 124

Query: 129 TNIVIGVCETDYS---GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYETWKL 183
             +  G          G    R       +T     L  E    V  P+  L K E  K+
Sbjct: 125 DYLATGHYARVAHDENGVKMLRGIDNNKDQTYFLNQLTSEQLEKVMFPIGHLPKPEVRKI 184

Query: 184 AQDIG 188
           A++ G
Sbjct: 185 AEEAG 189


>gi|309364979|emb|CAP23621.2| hypothetical protein CBG_03001 [Caenorhabditis briggsae AF16]
          Length = 808

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 54/189 (28%), Gaps = 7/189 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              L++ SGG DS+ C +         RV  +  D G    +E +      K +   + +
Sbjct: 338 KKVLVMVSGGVDSAVCAALLNRALGPGRVTAVHIDNGFMRHLESDAVEMSLKALDLPVHR 397

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           + D           +L +        +  +K +        V    +  L          
Sbjct: 398 Y-DYGTTFRSSSEHMLPEEKALDEIDDPELKRKIIGNTFIRVKDLIMNELKIN--HNDYF 454

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWKLA 184
                +        S       DTI+       L         V  PL    K E   L 
Sbjct: 455 LAQGTLRPDLIESASELASGHADTIKTHHNDTYLVRELRKAGKVIEPLKDFHKDEVRVLG 514

Query: 185 QDIGGQDLV 193
           +D+G  D +
Sbjct: 515 KDLGLPDAI 523


>gi|291451817|ref|ZP_06591207.1| bifunctional GMP synthase/glutamine amidotransferase [Streptomyces
           albus J1074]
 gi|291354766|gb|EFE81668.1| bifunctional GMP synthase/glutamine amidotransferase [Streptomyces
           albus J1074]
          Length = 530

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 56/187 (29%), Gaps = 11/187 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              A+   SGG DS+   +        ++  +  D+G   K E E          ++   
Sbjct: 225 TKRAICGLSGGVDSAVAAALVQKAIGTQLTCVYVDHGLMRKGETE----------QVEKD 274

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  + G    +  A    ++  +   +   K +        V  +    +V  A      
Sbjct: 275 FVAATGVQLKVVDAEERFLTALAGVSDPEQKRKIIGREFIRVFEQAQAEIVAEAAGEGED 334

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +               I++      L  +    +  PL  L K E   + Q+
Sbjct: 335 VAFLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPDDIEFELVEPLRMLFKDEVRMVGQE 394

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 395 LGLPEEI 401


>gi|239979964|ref|ZP_04702488.1| GMP synthase [Streptomyces albus J1074]
          Length = 542

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 56/187 (29%), Gaps = 11/187 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              A+   SGG DS+   +        ++  +  D+G   K E E          ++   
Sbjct: 237 TKRAICGLSGGVDSAVAAALVQKAIGTQLTCVYVDHGLMRKGETE----------QVEKD 286

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  + G    +  A    ++  +   +   K +        V  +    +V  A      
Sbjct: 287 FVAATGVQLKVVDAEERFLTALAGVSDPEQKRKIIGREFIRVFEQAQAEIVAEAAGEGED 346

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +               I++      L  +    +  PL  L K E   + Q+
Sbjct: 347 VAFLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPDDIEFELVEPLRMLFKDEVRMVGQE 406

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 407 LGLPEEI 413


>gi|195996679|ref|XP_002108208.1| hypothetical protein TRIADDRAFT_20051 [Trichoplax adhaerens]
 gi|190588984|gb|EDV29006.1| hypothetical protein TRIADDRAFT_20051 [Trichoplax adhaerens]
          Length = 369

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 51/189 (26%), Gaps = 9/189 (4%)

Query: 5   IKKAPSAL-LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  +   + +  SGG DS+        +   V  +        +    C     + + + 
Sbjct: 1   MSSSRQVIAVAMSGGVDSTIAAYLLRKQGHEVVGIFMKNWDITEETGIC--KTDEDMQDF 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +            +    + D  H   +  V    Q           R I F       +
Sbjct: 59  IKSCNHLGIPHKEVN--FVQDYWHHVFSPFVNGYKQGITPNPDITCNRMIKFNKLRQYCS 116

Query: 124 YRLGITNIVIGVCET-DYSGYPDCRHDTIRAIETAINLGMESHV---TVHTPLMWLKKYE 179
             LG+ N+  G          P        A +    L     +    +  P+  L K E
Sbjct: 117 ENLGVDNLATGHYAQLVTDSKPKLIQAVDEAKDQTYFLANVKKISLKNIMFPIGNLLKSE 176

Query: 180 TWKLAQDIG 188
              LA  IG
Sbjct: 177 VKNLALKIG 185


>gi|157813148|gb|ABV81319.1| putative GMP synthetase [Speleonectes tulumensis]
          Length = 197

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 2/63 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               L+L SGG DS+ C +      + D+V  +  D G   K+E        +K+   + 
Sbjct: 43  NNKVLMLVSGGVDSTVCAALLHKALKEDQVVAVHIDNGFMRKLESHHVEQSLRKLGLQLR 102

Query: 66  KWK 68
              
Sbjct: 103 MIN 105


>gi|149194572|ref|ZP_01871668.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Caminibacter mediatlanticus TB-2]
 gi|149135316|gb|EDM23796.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Caminibacter mediatlanticus TB-2]
          Length = 511

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 52/186 (27%), Gaps = 18/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS   +   +   D++  +  D G   K E E      K +       
Sbjct: 215 NKVICALSGGVDSSVTAALLHEAIGDKLIPIFVDTGLLRKNEREEVEHAFKNV------- 267

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    L      D   S L      + +   + +TF+   +              G
Sbjct: 268 -----LHVPLITVDAKDKFLSRLKGVTDPEEKRKIIGHTFIEVFDEEAKKHKDAKFLAQG 322

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    +   S        TI++      L       +  PL  L K E  KL  ++
Sbjct: 323 -----TLYPDVIESVSVKGPSKTIKSHHNVGGLPEWMKFELIEPLRELFKDEVRKLGLEL 377

Query: 188 GGQDLV 193
           G    +
Sbjct: 378 GLPKDL 383


>gi|268532154|ref|XP_002631205.1| Hypothetical protein CBG03001 [Caenorhabditis briggsae]
          Length = 741

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 54/189 (28%), Gaps = 7/189 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              L++ SGG DS+ C +         RV  +  D G    +E +      K +   + +
Sbjct: 271 KKVLVMVSGGVDSAVCAALLNRALGPGRVTAVHIDNGFMRHLESDAVEMSLKALDLPVHR 330

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           + D           +L +        +  +K +        V    +  L          
Sbjct: 331 Y-DYGTTFRSSSEHMLPEEKALDEIDDPELKRKIIGNTFIRVKDLIMNELKIN--HNDYF 387

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWKLA 184
                +        S       DTI+       L         V  PL    K E   L 
Sbjct: 388 LAQGTLRPDLIESASELASGHADTIKTHHNDTYLVRELRKAGKVIEPLKDFHKDEVRVLG 447

Query: 185 QDIGGQDLV 193
           +D+G  D +
Sbjct: 448 KDLGLPDAI 456


>gi|320325630|gb|EFW81692.1| argininosuccinate synthase [Pseudomonas syringae pv. glycinea str.
           B076]
          Length = 405

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 59/205 (28%), Gaps = 13/205 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +         + T      +   ++    +  R I         A
Sbjct: 61  ------YIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN------LGMESHVTVHTPLMWLKK 177
              G T         +   Y       + A     +      L   +           KK
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHNIPIERHGKK 174

Query: 178 YETWKLAQDIGGQDLVNLILEESHT 202
              + +  ++        +LE++ T
Sbjct: 175 KSPYSMDANLLHISYEGGVLEDTWT 199


>gi|86160461|ref|YP_467246.1| thiamine biosynthesis protein [Anaeromyxobacter dehalogenans
          2CP-C]
 gi|85776972|gb|ABC83809.1| thiamine biosynthesis protein [Anaeromyxobacter dehalogenans
          2CP-C]
          Length = 351

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +KK   A+ L SGG DS+  L+    +   V+ ++F  G
Sbjct: 1  MKKQGKAIALISGGLDSTLALALVRGQGIEVKAVNFYTG 39


>gi|72162988|ref|YP_290645.1| GMP synthase [Thermobifida fusca YX]
 gi|91206835|sp|Q47LQ0|GUAA_THEFY RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|71916720|gb|AAZ56622.1| GMP synthase (glutamine-hydrolyzing) [Thermobifida fusca YX]
          Length = 528

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 54/184 (29%), Gaps = 11/184 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +  A+   SGG DS+   +       DR+  +  D+G   + E      V K  V     
Sbjct: 223 SKRAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRQGE---AEQVEKDFVAATGA 279

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +        A+ G         +   K +        V  +    +V  A      
Sbjct: 280 SLKVVDAQERFLTALAG-------VTDPETKRKIIGREFIRVFEQAAREIVAEAGEGDEA 332

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +               I++      L  +   T+  PL  L K E  ++ ++
Sbjct: 333 VEFLVQGTLYPDVVESGGGNGTANIKSHHNVGGLPDDLQFTLVEPLRELFKDEVRRVGEE 392

Query: 187 IGGQ 190
           +G  
Sbjct: 393 LGLP 396


>gi|262306041|gb|ACY45613.1| gln amidotransferase [Ephemerella inconstans]
          Length = 197

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 38/119 (31%), Gaps = 2/119 (1%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               LLL SGG DS+ C +        D+V  +  D G   K E +  +   +KI     
Sbjct: 43  TNKVLLLVSGGVDSTVCAALLNKALPQDQVIAVHIDNGFMRKGESQKVMQSLEKIGLRPK 102

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
               +    +      +     +S T+   +     +  +      +    +    +A 
Sbjct: 103 IVNAAQQFLYGSTTIPIDKRDPNSRTRVTKILCMTMSPEDKRKIIGDTFVKIANEVIAE 161


>gi|169829330|ref|YP_001699488.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lysinibacillus sphaericus C3-41]
 gi|205816875|sp|B1HUL3|MNMA_LYSSC RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|168993818|gb|ACA41358.1| Probable tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lysinibacillus sphaericus C3-41]
          Length = 374

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 45/185 (24%), Gaps = 11/185 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS        +   V  +             C     +   +++     
Sbjct: 11  RVVVGMSGGVDSSVAAYLLKQQGYEVIGIFMKNWDDTDENGVC--TATEDYDDVIKVCNQ 68

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                + +             T  +             +     I        A  LG  
Sbjct: 69  IGIPYYAVN--FEKQYWDKVFTYFLEEYKAGRTPNPDVMC-NKEIKFKAFLEHAMSLGAD 125

Query: 130 NIVIGVCETDYSGYP----DCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYETWKL 183
            +  G                R       +T     L  E    V  P+  ++K E  K+
Sbjct: 126 YLATGHYARIDRSGDGEVKMLRGVDNNKDQTYFLNQLSQEQLAHVMFPIGDIEKKEVRKI 185

Query: 184 AQDIG 188
           A++ G
Sbjct: 186 AEEAG 190


>gi|33860597|ref|NP_892158.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Prochlorococcus marinus subsp. pastoris str. CCMP1986]
 gi|44887936|sp|Q7V3N7|GUAA_PROMP RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|33633539|emb|CAE18496.1| Glutamine amidotransferase class-I:GMP synthase [Prochlorococcus
           marinus subsp. pastoris str. CCMP1986]
          Length = 528

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 50/191 (26%), Gaps = 19/191 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST           ++  +  D G   K E E                
Sbjct: 225 KRVLLALSGGVDSSTLAFLLNKAIGKKLTCMFIDQGFMRKGEPEF--------------L 270

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +   +   + +  +          N     ++          R              L 
Sbjct: 271 MEFFDKKFHIKVEYINARERFIDKLNGITDPEEKRKIIGREFIRVFEEESNRLGPFQYLA 330

Query: 128 ITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              +   V E+  +       +     I++      L  +    +  PL  L K E  K+
Sbjct: 331 QGTLYPDVIESAGTNLDPKTGERIAVKIKSHHNVGGLPKDLQFKLVEPLRKLFKDEVRKV 390

Query: 184 AQDIGGQDLVN 194
              +G  D + 
Sbjct: 391 GGALGLPDEII 401


>gi|330889568|gb|EGH22229.1| argininosuccinate synthase [Pseudomonas syringae pv. mori str.
           301020]
          Length = 405

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 59/205 (28%), Gaps = 13/205 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +         + T      +   ++    +  R I         A
Sbjct: 61  ------YIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN------LGMESHVTVHTPLMWLKK 177
              G T         +   Y       + A     +      L   +           KK
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHNIPIERHGKK 174

Query: 178 YETWKLAQDIGGQDLVNLILEESHT 202
              + +  ++        +LE++ T
Sbjct: 175 KSPYSMDANLLHISYEGGVLEDTWT 199


>gi|94237991|gb|ABF13476.2| GMP synthase/glutamine amidotransferase [Arcanobacterium pyogenes]
          Length = 521

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 56/186 (30%), Gaps = 11/186 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             A+   SGG DSS   +       D++  +  D+G   K E E          +++  +
Sbjct: 217 KHAICGLSGGVDSSVAAALVHKAIGDQLTCVFVDHGLLRKGEAE----------QVVRDY 266

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             SLG   +        +S      +   K +                LV  A  A +  
Sbjct: 267 AASLGIRVVAVDESERFLSALDGVTDPETKRKIIGREFIRSFEAAQRALVAEAGAAGKEI 326

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   +               I++      L  +    +  PL  L K E   +  ++
Sbjct: 327 KFLVQGTLYPDVVESGGGDGTANIKSHHNVGGLPDDLDFELVEPLRDLFKDEVRAIGLEL 386

Query: 188 GGQDLV 193
           G  + +
Sbjct: 387 GLDEKL 392


>gi|82703361|ref|YP_412927.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Nitrosospira multiformis ATCC 25196]
 gi|123544047|sp|Q2Y6T6|MNMA_NITMU RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|82411426|gb|ABB75535.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Nitrosospira multiformis ATCC 25196]
          Length = 363

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 51/197 (25%), Gaps = 11/197 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + KA   ++  SGG DSS        +   V  L     + +  +  C     + +++  
Sbjct: 1   MSKA-RVVVGMSGGVDSSVAALLLKQQGYEVIGLFMKNWEDDDTDEYCSSR--QDLIDAA 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                       +            +  +   + +    PN  V     I        A 
Sbjct: 58  SVADVIGIPLEAVN---FSAEYKERVFSHFLAEYKAGRTPNPDVLCNAEIKFKAFLDHAA 114

Query: 125 RLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            LG   I  G      +     +       T         L          P+  L K +
Sbjct: 115 GLGADYIATGHYAQVRNTDGVFQLLKGEDGTKDQSYFLYRLNQAQLSRALFPIGHLYKRD 174

Query: 180 TWKLAQDIGGQDLVNLI 196
              +A+D G  +     
Sbjct: 175 VRSIAKDHGLPNFSKKD 191


>gi|324518702|gb|ADY47178.1| tRNA-specific 2-thiouridylase 1 [Ascaris suum]
          Length = 382

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/150 (11%), Positives = 39/150 (26%), Gaps = 5/150 (3%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS-FDYGQRNKVELECRLCVRKKIVE 62
           ++          SGG DS+            V  +   ++ Q  +   +C     K   +
Sbjct: 1   MMSVVRRVACALSGGVDSAVAALLLKRNGFDVVGVYMVNWDQVEEGVNDCPRT--KDEAD 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     E H++      +  +      +    +   + +  +  R + F       
Sbjct: 59  ARKVCVRLGIEFHVVDFT--REYWNDVFMNMLENYRRGLTVVSDVMCNRIVKFDHLHRYA 116

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIR 152
             +L +  +  G       G    R     
Sbjct: 117 FQKLCVDAVATGHFARTNLGDFLERRSMTN 146


>gi|325848903|ref|ZP_08170413.1| argininosuccinate synthase [Anaerococcus hydrogenalis
          ACS-025-V-Sch4]
 gi|325480547|gb|EGC83609.1| argininosuccinate synthase [Anaerococcus hydrogenalis
          ACS-025-V-Sch4]
          Length = 413

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 5/94 (5%)

Query: 2  NDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
           +I+ +A   +L +SGG D+S  ++W  +     V  +S D GQ      +      K +
Sbjct: 6  YEILNQAKKVVLAYSGGLDTSVMVTWLKENGAKEVICVSVDLGQ--VKNPDALEK--KAL 61

Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNV 94
               K+ +   ED  +       +   +  +NV
Sbjct: 62 KSGASKFYNVNVEDEFIDDYAFKTLKAGAKYENV 95


>gi|268680598|ref|YP_003305029.1| thiamine biosynthesis protein:ExsB [Sulfurospirillum deleyianum
          DSM 6946]
 gi|268618629|gb|ACZ12994.1| thiamine biosynthesis protein:ExsB [Sulfurospirillum deleyianum
          DSM 6946]
          Length = 327

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 4/69 (5%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ----RNKVELECRLCVRKKIVELMP 65
           AL+LFSGG DS   ++  + +   V  L  + G      +   LE R  +    +E++ 
Sbjct: 2  KALVLFSGGLDSMLAVNVLVQQGIEVIALHVNIGFGIKDDHYETLERRAKLAGACLEVID 61

Query: 66 KWKDSLGED 74
             + L + 
Sbjct: 62 VRDEYLQKI 70


>gi|315054853|ref|XP_003176801.1| argininosuccinate synthase [Arthroderma gypseum CBS 118893]
 gi|311338647|gb|EFQ97849.1| argininosuccinate synthase [Arthroderma gypseum CBS 118893]
          Length = 415

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 47/154 (30%), Gaps = 11/154 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + +    LL +SGG D+S  L+W L++   V     D GQ    + +        +    
Sbjct: 1   MAQNEKVLLAYSGGLDTSCILAWLLEQGHEVVCFLADVGQ--AEDFKEAERKALAVGA-K 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL-A 123
               + L ++ +  L       +       A+      L    V  R ++ +       A
Sbjct: 58  KLVVEDLKKEFVEDLCFKAIQCN-------AIWEDRYLLGARPVIARAMMRVAQQEGCTA 110

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA 157
              G T         + + Y       + A    
Sbjct: 111 VSHGCTGKGNDQVRFELAFYAIQPSINVIAPWRM 144


>gi|303247271|ref|ZP_07333545.1| GMP synthase, large subunit [Desulfovibrio fructosovorans JJ]
 gi|302491430|gb|EFL51318.1| GMP synthase, large subunit [Desulfovibrio fructosovorans JJ]
          Length = 516

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 46/185 (24%), Gaps = 18/185 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+            ++  +  D G     E E              +   
Sbjct: 222 VVCALSGGVDSTVVAVMLHKAIGKKLHCIFVDNGLLRLGEGE--------------EVAA 267

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            L E   L L  +                +                       A  L   
Sbjct: 268 YLREHFDLNLYYIKASKLFLDRLAGVTDPEKKRKIIGTTFIEVFEAEAAKLPKAKYLAQG 327

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   V E   S         I++      L     + +  PL  L K E  K+A +IG 
Sbjct: 328 TLYPDVIE---SESFRGPSAVIKSHHNVGGLPEHMKLQLIEPLRELFKDEVRKVAAEIGL 384

Query: 190 QDLVN 194
            D + 
Sbjct: 385 PDFII 389


>gi|147920090|ref|YP_686151.1| GMP synthase subunit B [uncultured methanogenic archaeon RC-I]
 gi|121690424|sp|Q0W468|GUAAB_UNCMA RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
           AltName: Full=GMP synthetase
 gi|110621547|emb|CAJ36825.1| GMP synthase, glutamine-hydrolyzing [uncultured methanogenic
           archaeon RC-I]
          Length = 305

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 55/187 (29%), Gaps = 27/187 (14%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              AL+  SGG DSS C   A     DR+  +  D G   K E +    + K        
Sbjct: 21  NGKALIALSGGVDSSVCAILAHRALGDRLIPVYVDTGLMRKGETDRIREIFK-------- 72

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   H++  +     +   +T   A               R I+  +F       +
Sbjct: 73  ----FMNPHVVDASDRFFNALKGVTDPEAK--------------RKIVGEMFIRVFEDVV 114

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +  T Y    +                +     +  PL  L K E  ++A+ 
Sbjct: 115 KGLEVDFLIQGTIYPDRIESEGGIKSHHNVGGLPSVTEFKGIIEPLQDLYKDEVREVARA 174

Query: 187 IGGQDLV 193
           +   + +
Sbjct: 175 LPLPEEI 181


>gi|108763299|ref|YP_632241.1| hypothetical protein MXAN_4063 [Myxococcus xanthus DK 1622]
 gi|108467179|gb|ABF92364.1| conserved hypothetical protein TIGR00268 [Myxococcus xanthus DK
           1622]
          Length = 298

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 72/251 (28%), Gaps = 55/251 (21%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
           M   ++   SAL+ FSGG DS+  L  A++   DR   L+                V  +
Sbjct: 21  MRAALRAHGSALVAFSGGVDSTFVLKVAVEELGDRALALT-----------ALSASVAPE 69

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
             +   +    LG  H++            L  N     Q    P               
Sbjct: 70  EADEARELATRLGARHVV------------LGSNELANPQYAANPTNRCYFCKTELYDIC 117

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
                 LG+  ++ G    D+  +                   E  V        L K E
Sbjct: 118 EAQRKSLGLAVVLDGFNADDFKDHRPGHK-----------AAQEHQVVSPLAQAGLTKEE 166

Query: 180 TWKLAQDIG---------GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
               +Q +G               +    + T     RD+  +            LR+ G
Sbjct: 167 IRAWSQSLGLPTWDKPQMACLASRIPYGTAVT-----RDRLLQVAAA-----ESELRKLG 216

Query: 231 WMEFKEKY-QD 240
           + +F+ +Y QD
Sbjct: 217 FRQFRVRYHQD 227


>gi|81299000|ref|YP_399208.1| GMP synthase [Synechococcus elongatus PCC 7942]
 gi|81167881|gb|ABB56221.1| GMP synthase (glutamine-hydrolyzing) [Synechococcus elongatus PCC
           7942]
          Length = 575

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 53/186 (28%), Gaps = 11/186 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST          D++  +  D G   K E E    + +   E     
Sbjct: 272 KRVLLALSGGVDSSTLAFLLHRAIGDQLTCMFIDQGFMRKGEPE---RLMEVFNEKFKIH 328

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            + +             +       +   K +        V       L     LA    
Sbjct: 329 VEYIQARDRF-------LQRLEGITDPEEKRKRIGHEFIRVFEEESRRLGPFDYLAQGTL 381

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +++            +     I++      L  +    +  PL  L K E  ++ + +
Sbjct: 382 YPDVIESADTNVDPKTGERVAVKIKSHHNVGGLPKDLQFKLVEPLRRLFKDEVRQVGRSL 441

Query: 188 GGQDLV 193
           G  + +
Sbjct: 442 GLPEEI 447


>gi|56751331|ref|YP_172032.1| GMP synthase [Synechococcus elongatus PCC 6301]
 gi|81595982|sp|Q5N2F8|GUAA_SYNP6 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|56686290|dbj|BAD79512.1| GMP synthetase [Synechococcus elongatus PCC 6301]
          Length = 534

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 53/186 (28%), Gaps = 11/186 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST          D++  +  D G   K E E    + +   E     
Sbjct: 231 KRVLLALSGGVDSSTLAFLLHRAIGDQLTCMFIDQGFMRKGEPE---RLMEVFNEKFKIH 287

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            + +             +       +   K +        V       L     LA    
Sbjct: 288 VEYIQARDRF-------LQRLEGITDPEEKRKRIGHEFIRVFEEESRRLGPFDYLAQGTL 340

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +++            +     I++      L  +    +  PL  L K E  ++ + +
Sbjct: 341 YPDVIESADTNVDPKTGERVAVKIKSHHNVGGLPKDLQFKLVEPLRRLFKDEVRQVGRSL 400

Query: 188 GGQDLV 193
           G  + +
Sbjct: 401 GLPEEI 406


>gi|67922387|ref|ZP_00515898.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Crocosphaera watsonii WH 8501]
 gi|67855731|gb|EAM50979.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Crocosphaera watsonii WH 8501]
          Length = 349

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 52/185 (28%), Gaps = 15/185 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS   +    +   V  L+        +      C  + +V+     +
Sbjct: 2   NKVVVGLSGGVDSSVAAASLQHQGYDVIGLTL------WLMKGKGQCCSEGMVDAAFICE 55

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 HI+    L   +       V+               R + F    A     L  
Sbjct: 56  QLGIAHHIVDTRDLFTENIIDYL--VSGYESGVTPLPCSQCNRAVKFGPMLAYAQAELNC 113

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-------TVHTPLMWLKKYETW 181
             I  G            R+  +RA++   +     +            PL    K ET 
Sbjct: 114 DRIATGHYARIDYDKITQRYQLLRAVDRNKDQSYFLYDLSQDILKGTIFPLGEQTKEETR 173

Query: 182 KLAQD 186
           ++A +
Sbjct: 174 RIAAE 178


>gi|306832460|ref|ZP_07465612.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus gallolyticus subsp. gallolyticus TX20005]
 gi|304425360|gb|EFM28480.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus gallolyticus subsp. gallolyticus TX20005]
          Length = 393

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 50/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 21  MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDY 76

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 77  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 133

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A  LG   +  G             H    A            L  E    V  PL  
Sbjct: 134 DYAMTLGADYVATGHYAQVSRDEDGTVHMLRGADNNKDQTYFLSQLSQEQLQKVMFPLGH 193

Query: 175 LKKYETWKLAQDIG 188
           L+K E  K+A+  G
Sbjct: 194 LEKPEVRKIAERAG 207


>gi|284162129|ref|YP_003400752.1| GMP synthase, large subunit [Archaeoglobus profundus DSM 5631]
 gi|284012126|gb|ADB58079.1| GMP synthase, large subunit [Archaeoglobus profundus DSM 5631]
          Length = 304

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 58/200 (29%), Gaps = 14/200 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A++  SGG DSS C   A     DR+  +  D G   + E E    +   +  +    K
Sbjct: 23  KAIIALSGGVDSSVCAVLAYKAIGDRLIPVFVDTGLMREGEPERIKEIFGHMGLVFVDAK 82

Query: 69  DSLGE-DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +   +    +            L   +  ++ + +  +  + G     ++ +        
Sbjct: 83  EEFFKALKGVTDPEEKRKIIGELFVRIFERVAEEHKADYLIQGTIYPDIIESMGGIKSHH 142

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------------VHTPLMWL 175
                    +      P          E A  LG+   +                  +  
Sbjct: 143 NVGGFPTKYKFKGVIEPLRELYKDEVREVARYLGLPKEICERMPFPGPGLAVRIVGEVTP 202

Query: 176 KKYETWKLAQDIGGQDLVNL 195
           +K E  + A  I  ++L + 
Sbjct: 203 EKVEIVRKANKIVEEELEDY 222


>gi|325107944|ref|YP_004269012.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Planctomyces brasiliensis DSM 5305]
 gi|324968212|gb|ADY58990.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Planctomyces brasiliensis DSM 5305]
          Length = 370

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 50/202 (24%), Gaps = 24/202 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK---------------VELE 51
            A   +L  SGG DSS       ++   V  L    G   +                  +
Sbjct: 1   MAERVVLAMSGGVDSSAAAHLLQEQGYEVIGLFMRSGVNEETCSLDDPNALPVINLKAHK 60

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
              C      +      +     H L            +    A +      PN  V   
Sbjct: 61  QGCCSASDAADARRVADELDIPFHALNFQDAFG----RIKDYFADEYLAGRTPNPCVQCN 116

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHV 166
           N +        A ++G T I  G          +                   +  +   
Sbjct: 117 NWLKFGKLWEFAQQVGATKIASGHYARITEQDGEYHLERGLDPGKDQSYVLFGIRPDLLP 176

Query: 167 TVHTPLMWLKKYETWKLAQDIG 188
            +  P+   +K E  ++A + G
Sbjct: 177 HILFPVGGFQKGEIREMAGEAG 198


>gi|92114249|ref|YP_574177.1| argininosuccinate synthase [Chromohalobacter salexigens DSM 3043]
 gi|119361263|sp|Q1QVN0|ASSY_CHRSD RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|91797339|gb|ABE59478.1| argininosuccinate synthase [Chromohalobacter salexigens DSM 3043]
          Length = 406

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 53/174 (30%), Gaps = 9/174 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  + W  + +   V T + D GQ  +VE          + E+
Sbjct: 1   MSDVKKVVLAYSGGLDTSVIVKWLQETYDCEVVTFTADIGQGEEVEPARAKAQALGVKEI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                ++    D++ P+         + T      +   ++    +  R +         
Sbjct: 61  YIEDLREEFVRDYVYPM-------FRANTIYEGEYLLGTSIARPLIAKRLVEIANETGAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
           A   G T         +   Y       + A     +L     +  +     + 
Sbjct: 114 AISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLNSREKLMNYCEEHDIP 167


>gi|312136706|ref|YP_004004043.1| pp-loop domain protein [Methanothermus fervidus DSM 2088]
 gi|311224425|gb|ADP77281.1| PP-loop domain protein [Methanothermus fervidus DSM 2088]
          Length = 323

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 28/61 (45%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
          + FSGG DS+  L  A +  + V  ++ D G   K ++     + ++I       K++  
Sbjct: 23 VAFSGGVDSTLLLKIAKEVSNEVIAVTVDIGAIPKNQITEAKKIAREIGVKHKIIKENFL 82

Query: 73 E 73
          E
Sbjct: 83 E 83


>gi|256082831|ref|XP_002577656.1| GMP synthetase [Schistosoma mansoni]
 gi|238662982|emb|CAZ33894.1| GMP synthetase (glutamine-hydrolysing) [Schistosoma mansoni]
          Length = 739

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 56/200 (28%), Gaps = 22/200 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               L+L SGG DS+ C +      D  ++  +  D G   K E    +   K +   + 
Sbjct: 212 QNKILILLSGGVDSTVCAALLSKTLDPSQIIAVHIDNGFLRKNESLRVIESLKSLGIKVH 271

Query: 66  KWKDSLGE------DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                L         H+  +      +  S +K  +         +              
Sbjct: 272 LINAGLRFLSGTTMLHVDVMTEALAPASVSPSKTQSDSEISTGTSDETSDPNTKECRSTL 331

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            ++AY             T    +              I +G    VT+        K +
Sbjct: 332 DSMAYFQS-----TDTSNTKRQSHVSGGGIHPHLESRNIPIGPLRTVTIFPE----DKRQ 382

Query: 180 TW-----KLAQDIGGQDLVN 194
                  ++AQ++  +  ++
Sbjct: 383 IIGDTFVRVAQEVWTELQLD 402


>gi|254514300|ref|ZP_05126361.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [gamma
           proteobacterium NOR5-3]
 gi|219676543|gb|EED32908.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [gamma
           proteobacterium NOR5-3]
          Length = 368

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/179 (12%), Positives = 38/179 (21%), Gaps = 5/179 (2%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      ++  SGG DSS      L++   VE L       +     C    +    +  
Sbjct: 1   MAAPQKVIVGMSGGVDSSVAALMLLEQGYHVEGLFMKNWDEDDGTEYC--TAKADFADAQ 58

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     H        +   +     +A            +  R  I        A 
Sbjct: 59  AVADKLQITLH--SANFAAEYWDNVFEHFLAEYQSGRTPNPDILCNRE-IKFRAFLDYAL 115

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            LG  +I  G                        +  + +              E  K 
Sbjct: 116 ELGADSIATGHYARRGVMQGRPALLKGLDANKDQSYFLHAVGHAELAKTLFPLGEIAKP 174


>gi|78356515|ref|YP_387964.1| GMP synthase [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
 gi|91206806|sp|Q311X7|GUAA_DESDG RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|78218920|gb|ABB38269.1| GMP synthase (glutamine-hydrolyzing) [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
          Length = 516

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 51/193 (26%), Gaps = 18/193 (9%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
           ++ +      +   SGG DS+            R+  +  D G     E++         
Sbjct: 213 SEQVGPDDQVVCALSGGIDSTVVAVLLHKAIGHRLHCIFVDNGVLRLNEVD--------- 263

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                +    L E   L L ++                +       +             
Sbjct: 264 -----EVSGYLREHFDLNLTVVDARERFMKQFAGVEDPEKKRKIIGYTFIDVFDEESQKI 318

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
                L    +   V E   S         I++      L     + +  PL  L K E 
Sbjct: 319 PNVKYLAQGTLYPDVIE---SISHKGPSAVIKSHHNVGGLPETMKLKLIEPLRELFKDEV 375

Query: 181 WKLAQDIGGQDLV 193
            KLA ++G  D +
Sbjct: 376 RKLAVELGLPDFI 388


>gi|306834574|ref|ZP_07467687.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus bovis ATCC 700338]
 gi|304423376|gb|EFM26529.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus bovis ATCC 700338]
          Length = 373

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 50/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A  LG   +  G             H    A            L  E    V  PL  
Sbjct: 114 DYAMTLGADYVATGHYAQVSRDEDGIVHMLRGADNNKDQTYFLSQLSQEQLQKVMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  K+A+  G
Sbjct: 174 LEKPEVRKIAERAG 187


>gi|262368696|ref|ZP_06062025.1| tRNA-specific 2-thiouridylase mnmA [Acinetobacter johnsonii SH046]
 gi|262316374|gb|EEY97412.1| tRNA-specific 2-thiouridylase mnmA [Acinetobacter johnsonii SH046]
          Length = 377

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 47/166 (28%), Gaps = 5/166 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS   +  L +  +VE L     + +     C     + + +    
Sbjct: 1   MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGLFMKNWEEDDGTEYC--TAMEDLADAQAV 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H    A         + ++   +      PN  +     I        A +L
Sbjct: 59  CDKLGIKLHT---ANFAMEYWDRVFEHFLAEYAAGRTPNPDILCNKEIKFRAFLDHAMQL 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
           G   I  G          + + +    +   ++   +    +H   
Sbjct: 116 GADFIATGHYARRGETMTNSKGEEYAPLLRGLDKNKDQTYFLHAVH 161


>gi|331701087|ref|YP_004398046.1| tRNA-specific 2-thiouridylase mnmA [Lactobacillus buchneri NRRL
           B-30929]
 gi|329128430|gb|AEB72983.1| tRNA-specific 2-thiouridylase mnmA [Lactobacillus buchneri NRRL
           B-30929]
          Length = 374

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 47/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS        +   V  +             C     +  
Sbjct: 1   MQD--NSQTRVVVGMSGGVDSSVVAYLLKQQGYDVIGVFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            +      + +    P+  V     I      
Sbjct: 57  KDVAKVANKIGIPYYSVN---FEKEYWDRVFTYFLDEYKKGRTPDPDVICNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCET------DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
             A  LG   I  G           ++                  L  +    V  P+  
Sbjct: 114 DYALELGADYIATGHYAQLTRDADGHNHLLRASDGNKDQTYFLSQLSADQLDRVMFPIGN 173

Query: 175 LKKYETWKLAQDIG 188
           L K +  K+A++ G
Sbjct: 174 LVKPDVRKIAREAG 187


>gi|331270376|ref|YP_004396868.1| GMP synthase, large subunit [Clostridium botulinum BKT015925]
 gi|329126926|gb|AEB76871.1| GMP synthase, large subunit [Clostridium botulinum BKT015925]
          Length = 517

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 59/187 (31%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS            ++  +  D+G   K E +    + KK  ++    
Sbjct: 223 KKVLCALSGGVDSSVAAVLVHKAIGKQLTCVFVDHGLLRKDEGDQVEAIFKKQFDMNLIR 282

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            ++           LG +   S  +     I +               +      A +LG
Sbjct: 283 VNAA-------ERFLGKLKGVSDPETKRKIIGEEF-------------IRVFEEEAGKLG 322

Query: 128 -ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  +V G    D          TI++      L  +   ++  PL  L K E   + ++
Sbjct: 323 QIDFLVQGTIYPDVVESGTNTSATIKSHHNVGGLPEDMQFSLIEPLRELFKDEVRAVGEE 382

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 383 LGIPHKL 389


>gi|291519700|emb|CBK74921.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Butyrivibrio fibrisolvens 16/4]
          Length = 354

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 46/183 (25%), Gaps = 8/183 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
            AL+  SGG DSS       +        +   YG  +    +   C     V+      
Sbjct: 2   KALIAMSGGVDSSVAALLMKENGYECIGCTMKLYGNEDVDLSDTSTCCSLDDVQDAKDVA 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             LG  H        D     +  N     +    PN  +     +        A  LG 
Sbjct: 62  RKLGMLHYTW--NFKDQFKEKVIDNFTYCYEHAMTPNPCIECNKHLKFCELYRRAKELGC 119

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL-----KKYETWKL 183
             IV G            +    +      +  + S                 K E  ++
Sbjct: 120 DKIVTGHYARVRKCDNGYQLLKGKDASKDQSYVLYSMTQDELAHTDFPLGEYSKDEIRRI 179

Query: 184 AQD 186
           A+ 
Sbjct: 180 AEK 182


>gi|257068069|ref|YP_003154324.1| GMP synthase (glutamine-hydrolyzing) [Brachybacterium faecium DSM
           4810]
 gi|256558887|gb|ACU84734.1| GMP synthase (glutamine-hydrolyzing) [Brachybacterium faecium DSM
           4810]
          Length = 533

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 50/183 (27%), Gaps = 2/183 (1%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           SA+   SGG DS+   +       DR+  +  ++G   + E         +         
Sbjct: 221 SAICALSGGVDSAVAAALVQRAIGDRLTCVYVNHGLMRQDESAQIEKAFGESTGGAKLVM 280

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               +  +  LA + D                       +  + ++    A   A +   
Sbjct: 281 VDAEQQFLDALAGVTDPETKRKIIGREFIRTFERAQADILREQGVVEGEGAEAHAEQ-KA 339

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +    +  PL  L K E   +   +G
Sbjct: 340 FLVQGTLYPDVVESGGGDGAANIKSHHNVGGLPEDLAFELVEPLRALFKDEVRAVGTQLG 399

Query: 189 GQD 191
             D
Sbjct: 400 LPD 402


>gi|150865036|ref|XP_001384086.2| hypothetical protein PICST_31371 [Scheffersomyces stipitis CBS
           6054]
 gi|149386292|gb|ABN66057.2| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 484

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 66/187 (35%), Gaps = 19/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVE--------TLSFDYGQRNKVELECRLCVRKK 59
               L+  SGG DS  CL++ L ++ R+          ++ D+G R+    E      K 
Sbjct: 23  PSRVLVALSGGVDS-ICLTYLLSQYSRLYCNNAIAINAITIDHGYRSGSNEE-----AKA 76

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           + +L+ KW    G  HI+       +           +++            +   L  A
Sbjct: 77  VGKLVEKW----GVQHIVKKLEYEKLPTEYSNFEEIARMKRYEKFEETCHQSDASHLFVA 132

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
             L  +L  T I      +   G    +  T   +++ +    +  ++V  PL+  +K E
Sbjct: 133 HNLNDQLE-TFIQRLQGNSSIYGLAGLKAQTSLPVQSQLPSAEKERISVIRPLLSFEKSE 191

Query: 180 TWKLAQD 186
                + 
Sbjct: 192 IIDTCKQ 198


>gi|159044055|ref|YP_001532849.1| tRNA-specific 2-thiouridylase MnmA [Dinoroseobacter shibae DFL 12]
 gi|205816871|sp|A8LK49|MNMA_DINSH RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|157911815|gb|ABV93248.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Dinoroseobacter shibae DFL 12]
          Length = 384

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/184 (11%), Positives = 44/184 (23%), Gaps = 6/184 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +        V  ++   Y     +  +   C  + I +     +
Sbjct: 25  RVVVAMSGGVDSSVVAAELACEGYDVVGVTLQLYDHGAALAKKGACCAGRDIHDARRVAE 84

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +     ++L        +      +  +                   L+  A        
Sbjct: 85  EMGFPHYVLDYENTFREAVIDEFADSYLGGATPVPCIRCNERVKFKDLLETARDLEA-DC 143

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL----KKYETWKLA 184
                 +         +         + +  L   +   +      L     K ET  LA
Sbjct: 144 MATGHYIQRKMGPAKAELHSAADANRDQSYFLFSTTQEQLDYLRFPLGHLASKAETRALA 203

Query: 185 QDIG 188
              G
Sbjct: 204 AKHG 207


>gi|295086500|emb|CBK68023.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides xylanisolvens XB1A]
          Length = 361

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/192 (8%), Positives = 48/192 (25%), Gaps = 11/192 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + ++    L+  SGG DS+       ++   +  ++         E +    + +++   
Sbjct: 1   MEERNKRVLVGMSGGIDSTATCLMLQEQGYEIVGVTMRVWGD---EPQDARELAERMGIE 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                + +     +    + +                  + N     R +         A
Sbjct: 58  HYVADERIPFKETIVKNFIDEYKQGRTPNP-------CVMCNPLFKFRVLTEWADKLNCA 110

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           +        +     +            ++      LG +       PL    K +  + 
Sbjct: 111 WVATGHYSRLEEKNGNIYIVAGDDDKKDQSYF-LWRLGQDVLKRCIFPLGDYTKVKVREY 169

Query: 184 AQDIGGQDLVNL 195
             + G +     
Sbjct: 170 LAEKGYEAKSKE 181


>gi|253681080|ref|ZP_04861883.1| GMP synthase (glutamine-hydrolyzing) [Clostridium botulinum D str.
           1873]
 gi|253562929|gb|EES92375.1| GMP synthase (glutamine-hydrolyzing) [Clostridium botulinum D str.
           1873]
          Length = 512

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 59/187 (31%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS            ++  +  D+G   K E +    + KK  ++    
Sbjct: 218 KKVLCALSGGVDSSVAAVLVHKAIGKQLTCVFVDHGLLRKDEGDQVEAIFKKQFDMNLIR 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            ++           LG +   S  +     I +               +      A +LG
Sbjct: 278 VNA-------EERFLGKLKGVSDPETKRKIIGEEF-------------IRVFEEEAGKLG 317

Query: 128 -ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  +V G    D          TI++      L  +   ++  PL  L K E   + ++
Sbjct: 318 QIDFLVQGTIYPDVVESGTNTSATIKSHHNVGGLPEDMQFSLIEPLRELFKDEVRAVGEE 377

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 378 LGIPHKL 384


>gi|289805002|ref|ZP_06535631.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 270

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 52/174 (29%), Gaps = 25/174 (14%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DSS      + R  RV    F+ G            +   + ++     + 
Sbjct: 122 VLSLISGGFDSSVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 172

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 173 FGSSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 225

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           +V G      S         I  +   +         +  PL+   K     LA
Sbjct: 226 LVTGEALGQVSSQTLTNLRLIDNVSDTL---------ILRPLISYDKEHIINLA 270


>gi|73669859|ref|YP_305874.1| argininosuccinate synthase [Methanosarcina barkeri str. Fusaro]
 gi|119361288|sp|Q469Z8|ASSY_METBF RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|72397021|gb|AAZ71294.1| argininosuccinate synthase [Methanosarcina barkeri str. Fusaro]
          Length = 395

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 60/205 (29%), Gaps = 10/205 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKI--VE 62
            A    L +SGG D+S C+    ++  +D V T+S D GQ  + E++      +KI    
Sbjct: 1   MAKKVALAYSGGLDTSVCIPILKEKYGYDEVVTISVDVGQ-PEEEIKRADAKAEKISNKH 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                K+   +D++ PL          +      +                + L    T 
Sbjct: 60  YTIDAKEEFVKDYVFPLIKANGSYEGYVMGTSIARPLIAKKVVEAARKEGAVALAHGCTG 119

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
                +    +          P    +  R  E          V V     W      W 
Sbjct: 120 KGNDQLRFEAVFRQTDMDVIAPMREMNLTREWEIDYAKEHGIPVEVTKSKPWSVDENIWS 179

Query: 183 LAQDIGGQD-----LVNLILEESHT 202
            + + G  +         I E + +
Sbjct: 180 RSIEGGRLEDPSFVPPEEIFEWTTS 204


>gi|71894390|ref|YP_278498.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycoplasma synoviae 53]
 gi|123644146|sp|Q4A634|MNMA_MYCS5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|71851178|gb|AAZ43787.1| tRNA-(5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Mycoplasma synoviae 53]
          Length = 372

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/190 (10%), Positives = 44/190 (23%), Gaps = 9/190 (4%)

Query: 5   IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFD-----YGQRNKVELECRLCVR- 57
           ++     +++  SGG DSS            V  L                 E    +  
Sbjct: 1   MQNNKKTVVVGLSGGVDSSVAAYLLKKN-YNVIGLFMRNWDSLINNDYLGNREINNDICP 59

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN-IIFL 116
           +++     +      +  +  +  + +         ++   +        +  +     L
Sbjct: 60  QELDYKDAQEIARQLDIPLYRVDFVKEYWDYVFENFISEYKKGRTPNPDILCNKYIKFDL 119

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
                               +                      L  E    V  PL  L 
Sbjct: 120 FAKHAFNELKTDYIATGHYAKMKNGELYRASDKNKDQSYFLSQLSKEQLKKVLFPLENLT 179

Query: 177 KYETWKLAQD 186
           K E  K+A++
Sbjct: 180 KDEIRKIARE 189


>gi|70732178|ref|YP_261934.1| argininosuccinate synthase [Pseudomonas fluorescens Pf-5]
 gi|119361308|sp|Q4K749|ASSY_PSEF5 RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|68346477|gb|AAY94083.1| argininosuccinate synthase [Pseudomonas fluorescens Pf-5]
          Length = 405

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 59/205 (28%), Gaps = 13/205 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +         + T      +   ++    +  R I         A
Sbjct: 61  ------YIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN------LGMESHVTVHTPLMWLKK 177
              G T         +   Y       + A     +      L   +           KK
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHGIPIERHGKK 174

Query: 178 YETWKLAQDIGGQDLVNLILEESHT 202
              + +  ++        +LE++ T
Sbjct: 175 KSPYSMDANLLHISYEGGVLEDTWT 199


>gi|114288|sp|P13257|ASSY_METBA RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|149818|gb|AAA72677.1| argininosuccinate synthetase [Methanosarcina barkeri]
          Length = 396

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 60/205 (29%), Gaps = 10/205 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKI--VE 62
            A    L +SGG D+S C+    ++  +D V T+S D GQ  + E++      +KI    
Sbjct: 1   MAKKVALAYSGGLDTSVCIPILKEKYGYDEVVTISVDVGQ-PEEEIKRADAKAEKISNKH 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                K+   +D++ PL          +      +                + L    T 
Sbjct: 60  YTIDAKEEFVKDYVFPLIKANGSYEGYVMGTSIARPLIAKKVVEAARKEGAVALAHGCTG 119

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
                +    +          P    +  R  E          V V     W      W 
Sbjct: 120 KGNDQLRFEAVFRQTDMDVIAPMREMNLTREWEIDYAKEHGIPVEVTKSKPWSVDENIWS 179

Query: 183 LAQDIGGQD-----LVNLILEESHT 202
            + + G  +         I E + +
Sbjct: 180 RSIEGGRLEDPSFVPPEEIFEWTTS 204


>gi|226312727|ref|YP_002772621.1| tRNA U34-sulfurtransferase [Brevibacillus brevis NBRC 100599]
 gi|226095675|dbj|BAH44117.1| tRNA U34-sulfurtransferase [Brevibacillus brevis NBRC 100599]
          Length = 370

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/194 (11%), Positives = 49/194 (25%), Gaps = 14/194 (7%)

Query: 5   IKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIV 61
           +K+      ++  SGG DSS        +   V  +   ++   ++          + + 
Sbjct: 1   MKRPEDTRVVVGMSGGVDSSVTAYLLKQQGYDVIGIFMKNWDDTDEFGHCTAEEDFQDVR 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
            +  +            +    +         +    +        +  R  I       
Sbjct: 61  RVCEQIGIPYYT-----VNFEKEYMDKVFQYFLDEYKRGRTPNPDVMCNRE-IKFGELLA 114

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLK 176
               LG   I  G          + +      +          LG E       P+  L 
Sbjct: 115 KVMDLGADYIATGHYAQVKYIDGEYKLIRGADNNKDQTYFLNVLGQEQLSKTMFPIGHLP 174

Query: 177 KYETWKLAQDIGGQ 190
           K +  ++A+  G  
Sbjct: 175 KPQVREIAEKAGLY 188


>gi|262306081|gb|ACY45633.1| gln amidotransferase [Neogonodactylus oerstedii]
          Length = 197

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 22/65 (33%), Gaps = 2/65 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +   L+L SGG DS+ C +          V  +  D G   K E        +K+   + 
Sbjct: 43  SNKVLMLVSGGVDSTVCAALLHKALSEDQVIAVHIDNGFMRKNESLQVEQSLRKLGLKLR 102

Query: 66  KWKDS 70
                
Sbjct: 103 VINAR 107


>gi|123967573|ref|YP_001008431.1| GMP synthase [Prochlorococcus marinus str. AS9601]
 gi|226739665|sp|A2BNG3|GUAA_PROMS RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|123197683|gb|ABM69324.1| Glutamine amidotransferase class-I:GMP synthase [Prochlorococcus
           marinus str. AS9601]
          Length = 528

 Score = 53.0 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 49/192 (25%), Gaps = 19/192 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSST          +++  +  D G   K E E               
Sbjct: 224 NKKVLLALSGGVDSSTLAFLLNKAIGNQLTCMFIDQGFMRKGEPEF-------------- 269

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +   +   + +  +                +           R              L
Sbjct: 270 LMNFFDKKFHIKVEYINARERFIAKLKGITDPEQKRKIIGEEFIRVFEEESNRLGPFQYL 329

Query: 127 GITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
               +   V E+  +       +     I++      L  +    +  PL  L K E  K
Sbjct: 330 AQGTLYPDVIESAGTNIDPKTGERIAVKIKSHHNVGGLPKDLQFKLVEPLRKLFKDEVRK 389

Query: 183 LAQDIGGQDLVN 194
           +   +G  D + 
Sbjct: 390 VGAALGLPDEII 401


>gi|323704672|ref|ZP_08116250.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323536134|gb|EGB25907.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 369

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 48/188 (25%), Gaps = 10/188 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
            +    ++  SGG DSS       ++   V  +             C     +   +++ 
Sbjct: 5   NQNVKVVVGMSGGVDSSVSALLLKEQGYDVIGIFMKNWDEEDDSGYC--TAAEDYEDVVR 62

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    + +            + +    + +    PN  V     I        + +
Sbjct: 63  VCDKIGIPYYSIN---FTKEYWDRVFQYFLNEYKSGRTPNPDVMCNKEIKFKAFLEFSMK 119

Query: 126 LGITNIVIGVCETDYSGYPDCRH-----DTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           +G   I  G            +                 LG +       P+  L K E 
Sbjct: 120 IGADYIATGHYARIEHIDGHYKMLKGVDKNKDQTYFLCELGQKQLSKTMFPIGHLDKSEV 179

Query: 181 WKLAQDIG 188
            ++A+  G
Sbjct: 180 REIARKAG 187


>gi|15790341|ref|NP_280165.1| hypothetical protein VNG1299C [Halobacterium sp. NRC-1]
 gi|169236074|ref|YP_001689274.1| thiamine biosynthesis protein thiI [Halobacterium salinarum R1]
 gi|20140811|sp|Q9HQ72|THII_HALSA RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|229558680|sp|B0R5A9|THII_HALS3 RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|10580817|gb|AAG19645.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
 gi|167727140|emb|CAP13926.1| thiamine biosynthesis protein thiI [Halobacterium salinarum R1]
          Length = 392

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 51/188 (27%), Gaps = 30/188 (15%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIVELMPKWK 68
           + L SGG DS      ++ R   V  L     DYG              + + +  P   
Sbjct: 185 VALVSGGIDSPVAAWESMRRGAPVIPLYLALGDYGG--PDHRARAEAAVRTLDDYAPNHD 242

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            SL                 +   +   ++         +  R  ++   A  +A   G 
Sbjct: 243 LSL---------------RVAPAGDAIDRLAAATGRTRMLSFRRFMY-RVAEHVAEHAGA 286

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             IV G      S         +            + + VH PL+   K      A+ I 
Sbjct: 287 AGIVTGEAVGQKSSQTTANLGVVDRA---------TTLPVHRPLLTWDKQRITAAARSID 337

Query: 189 GQDLVNLI 196
                +L 
Sbjct: 338 TFRDSSLD 345


>gi|325302866|tpg|DAA34469.1| TPA_exp: GMP synthase [Amblyomma variegatum]
          Length = 293

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 24/63 (38%), Gaps = 2/63 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +      R D+V  L  D G   K E        K +   +   
Sbjct: 56  KVLMLVSGGVDSTVCAALLHKALREDQVIALHIDNGFMRKDESAQVEQSLKHLGLRLRVV 115

Query: 68  KDS 70
             S
Sbjct: 116 DAS 118


>gi|153807264|ref|ZP_01959932.1| hypothetical protein BACCAC_01542 [Bacteroides caccae ATCC 43185]
 gi|149130384|gb|EDM21594.1| hypothetical protein BACCAC_01542 [Bacteroides caccae ATCC 43185]
          Length = 365

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 54/187 (28%), Gaps = 10/187 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIV 61
           +I++    LL  SGG DSS      L+    V  ++F + + N      E    + + + 
Sbjct: 1   MIEENKRVLLGMSGGTDSSVAAMRLLEAGYEVIGVTFRFYELNGSTEYLEDARSLAEHLG 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                +      +  +    + +      T        +           + + + + AT
Sbjct: 61  IRHITYDAREVFNKQIIEYFVQEYMAG-RTPVPCTLCNNYLKWPLLAELADEMGIFYIAT 119

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
             Y   +         +      D         +  +         +  P+  + K E  
Sbjct: 120 GHYVRKVKLEDTYYITSAADSDKDQTFFLWGLKQDILR-------RMLLPMGDITKVEAR 172

Query: 182 KLAQDIG 188
            LA + G
Sbjct: 173 ALAAERG 179


>gi|39938611|ref|NP_950377.1| tRNA-specific 2-thiouridylase MnmA [Onion yellows phytoplasma OY-M]
 gi|81565131|sp|Q6YR90|MNMA_ONYPE RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|39721720|dbj|BAD04210.1| tRNA(5-methylaminomethyl-2-thiouridylate) [Onion yellows
           phytoplasma OY-M]
          Length = 378

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/195 (11%), Positives = 48/195 (24%), Gaps = 21/195 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLS---------FDYGQRNKVELECRLCVRKKI 60
             ++  SGG DS+        +   VE +          FD      +   C   +    
Sbjct: 3   KVVVGLSGGVDSAVAAFLLKKQGYLVEAVFMRNWDSNLNFDIQGNPTLNDICSQEL--DY 60

Query: 61  VELMPKWKDSLGEDHILPLA---------ILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
            + +   +    + H +                   ++LT N  +   +      F+   
Sbjct: 61  KDSLKVSEQLGIKLHRVDFIEEYWQKVFMSFIKAFENNLTPNPDILCNNEIKFRAFIEYA 120

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
                     + +   I        +                      L  +    +  P
Sbjct: 121 TTKLAPQYIAMGHYANIIYE-TSSDQKLVPRLACAVDQNKDQTYFLSQLTTKQLQNILFP 179

Query: 172 LMWLKKYETWKLAQD 186
           L  L K E  ++A +
Sbjct: 180 LGNLTKQEVRQIALE 194


>gi|293370352|ref|ZP_06616907.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides ovatus SD CMC 3f]
 gi|292634573|gb|EFF53107.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides ovatus SD CMC 3f]
          Length = 361

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/192 (8%), Positives = 48/192 (25%), Gaps = 11/192 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + ++    L+  SGG DS+       ++   +  ++         E +    + +++   
Sbjct: 1   MEERNKRVLVGMSGGIDSTATCLMLQEQGYEIVGVTMRVWGD---EPQDARELAERMGIE 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                + +     +    + +                  + N     R +         A
Sbjct: 58  HYVADERIPFKETIVKNFIDEYKQGRTPNP-------CVMCNPLFKFRVLTEWADKLNCA 110

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           +        +     +            ++      LG +       PL    K +  + 
Sbjct: 111 WVATGHYSRLEEKNGNIYIVAGDDDKKDQSYF-LWRLGQDVLKRCIFPLGDYTKVKVREY 169

Query: 184 AQDIGGQDLVNL 195
             + G +     
Sbjct: 170 LAEKGYEAKSKE 181


>gi|282890136|ref|ZP_06298667.1| hypothetical protein pah_c013o042 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499987|gb|EFB42275.1| hypothetical protein pah_c013o042 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 375

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/190 (11%), Positives = 58/190 (30%), Gaps = 12/190 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVEL 63
           +    + ++  SGG DSS       ++   V  +   ++ + ++  +       + +V +
Sbjct: 1   MSSQKTVVVGMSGGVDSSVSALLLKEQGYNVIGMFMKNWDETDENGVCPATRDFEDVVRV 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
             +            +  + +   +  +  +    Q +      +  R  I        A
Sbjct: 61  CDQISIPY-----YSVNFVKEYWDNVFSHFIEELKQGHTPNPDILCNRE-IKFKVMLDKA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            +LG   +  G    +Y      +                 +   +      P+  L+K 
Sbjct: 115 LQLGADFLATGHYCRNYLAESHTQLLKGLDPGKDQSYFLYAISQRALHRALFPIGNLQKS 174

Query: 179 ETWKLAQDIG 188
           E  ++A+  G
Sbjct: 175 EVREIARKHG 184


>gi|262306017|gb|ACY45601.1| gln amidotransferase [Semibalanus balanoides]
          Length = 197

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 2/63 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             LLL SGG DS+ C +        D+V  +  D G   K E        +KI   +   
Sbjct: 45  KVLLLVSGGVDSTVCAALLHKALSQDQVIAVHIDNGFMRKHESLQVEQSLRKIGLKLRVI 104

Query: 68  KDS 70
              
Sbjct: 105 NAR 107


>gi|228475220|ref|ZP_04059946.1| tRNA-methyltransferase [Staphylococcus hominis SK119]
 gi|228270831|gb|EEK12233.1| tRNA-methyltransferase [Staphylococcus hominis SK119]
          Length = 370

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 49/189 (25%), Gaps = 11/189 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  K    ++  SGG DSS       ++   V  +             C     +   ++
Sbjct: 1   MSNKDIRVVVGMSGGVDSSVTAYLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDYNDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +          + +            +      + +    PN  V     I        A
Sbjct: 59  IAVCNQIGIPYYAVN---FEKEYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLEHA 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMWLKK 177
            +LG   +  G     +                         L  +    V  P+  L+K
Sbjct: 116 LKLGADYVATGHYARIHRHEDSHVEMLRGIDNNKDQTYFLNQLSQKQLSKVMFPIGDLEK 175

Query: 178 YETWKLAQD 186
            E  K+A++
Sbjct: 176 KEVRKIAEE 184


>gi|192358790|ref|YP_001983095.1| argininosuccinate synthase [Cellvibrio japonicus Ueda107]
 gi|190684955|gb|ACE82633.1| argininosuccinate synthase [Cellvibrio japonicus Ueda107]
          Length = 405

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 46/157 (29%), Gaps = 7/157 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  + W  + +   V T + D GQ  +VE          + ++
Sbjct: 1   MSSIKKVVLAYSGGLDTSVIVKWLQENYQCEVVTFTADIGQGEEVEPARAKAQALGVKQI 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +         + T      +   ++    +  R I         A
Sbjct: 61  ------YIDDLREEFVRDFVFPMFRANTIYEGEYLLGTSIARPLIAKRLIEIANEVGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         +   Y       + A     +L
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGIKVIAPWREWDL 151


>gi|87199217|ref|YP_496474.1| argininosuccinate synthase [Novosphingobium aromaticivorans DSM
           12444]
 gi|119361300|sp|Q2G933|ASSY_NOVAD RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|87134898|gb|ABD25640.1| argininosuccinate synthase [Novosphingobium aromaticivorans DSM
           12444]
          Length = 404

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 53/178 (29%), Gaps = 7/178 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W        V T + D GQ  ++E          + + 
Sbjct: 1   MSDIKKVVLAYSGGLDTSVILKWLQVTYNCEVVTFTADLGQGEELEPARAKAKLMGVPD- 59

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + D L E+ +            +  +     +   ++    +  R I         A
Sbjct: 60  HHIYIDDLREEFVRDFVF---PMMRANARYEGDYLLGTSIARPLISKRLIEIARETGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYE 179
              G T         + S Y       + A     +L   + +        + + K +
Sbjct: 117 VAHGATGKGNDQVRFELSAYALEPGIKVIAPWREWDLTSRTALIAWAEAHQIPVPKDK 174


>gi|332289173|ref|YP_004420025.1| tRNA-specific 2-thiouridylase MnmA [Gallibacterium anatis UMN179]
 gi|330432069|gb|AEC17128.1| tRNA-specific 2-thiouridylase MnmA [Gallibacterium anatis UMN179]
          Length = 384

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 53/188 (28%), Gaps = 9/188 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
            +    ++  SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 22  NQQKKVIVGMSGGVDSSVSAYILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 78

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     +             +  + I F  F    A  
Sbjct: 79  AVCDKLG-IKLHKINFAAEYWDNVFEHFLQEYKAGRTPNPDILCNKEIKFKAFLEYAAED 137

Query: 126 LGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           LG   I  G          + +                 L  +       P+  L+K   
Sbjct: 138 LGADYIATGHYVRRRGDDENAQLLRGLDGNKDQSYFLYTLSHKQVGQSLFPVGELEKPVV 197

Query: 181 WKLAQDIG 188
            ++A+D+G
Sbjct: 198 RQIAEDLG 205


>gi|242013853|ref|XP_002427615.1| GMP synthase, putative [Pediculus humanus corporis]
 gi|212512030|gb|EEB14877.1| GMP synthase, putative [Pediculus humanus corporis]
          Length = 685

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 2/63 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               LLL SGG DS+ C +      R D+V  +  D G   K E        +++   + 
Sbjct: 229 NNKVLLLVSGGVDSTVCAALLHKALRPDQVIAVHIDNGFMRKNESALVEESLQRLGLKLK 288

Query: 66  KWK 68
              
Sbjct: 289 VVN 291


>gi|319779294|ref|YP_004130207.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Taylorella equigenitalis MCE9]
 gi|317109318|gb|ADU92064.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Taylorella equigenitalis MCE9]
          Length = 371

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/189 (12%), Positives = 48/189 (25%), Gaps = 14/189 (7%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            P  ++  SGG DSS       ++   V  +     + +     C     +  ++++   
Sbjct: 3   KPKVVVGLSGGVDSSVSAYLLKEQGYDVLGVFMKNWEDDDDSEFCSTR--QDWIDVVSVA 60

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                +   +            +  +   +      PN  V     I        A   G
Sbjct: 61  DTLGID---VDAVNFATEYKDRVFSDFLREYSAGRTPNPDVLCNAEIKFKAFLDYAMNTG 117

Query: 128 ITNIVIGVCETDYSGYPDCRHDTI---------RAIETAINLGMESHVTVHTPLMWLKKY 178
              I  G      +                           L  +    V  P+  L K 
Sbjct: 118 ADFIATGHYARVRAIDGPSGKTYQLLKGLDPNKDQSYFLHRLNQDQLSKVIFPVGELLKT 177

Query: 179 ETWKLAQDI 187
           +  ++A+ +
Sbjct: 178 KVREIAEKL 186


>gi|225163500|ref|ZP_03725813.1| GMP synthase, large subunit [Opitutaceae bacterium TAV2]
 gi|224801876|gb|EEG20159.1| GMP synthase, large subunit [Opitutaceae bacterium TAV2]
          Length = 521

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 52/187 (27%), Gaps = 14/187 (7%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS C +        ++  +  D G   K E        + +     K
Sbjct: 220 KSRVLLALSGGVDSSVCAALLHKAIGKQLTCVYVDTGLMRKDET----KHIEALYAKHFK 275

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               + +     L  L  I+     + +                ++   +         L
Sbjct: 276 IDLRIVDASRTFLKRLKGITDPERKRKIIGAAFIEVFEKKVRELKHKEGI-------EYL 328

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   I   V E+   G        I++      L       +  PL  L K E   +   
Sbjct: 329 GQGTIYPDVIESMAIGN--NPAAMIKSHHNVGGLPERMKFKLVEPLRQLFKDEVRLVGTK 386

Query: 187 IGGQDLV 193
           +G    V
Sbjct: 387 LGLPKEV 393


>gi|218289827|ref|ZP_03494027.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Alicyclobacillus acidocaldarius LAA1]
 gi|218240118|gb|EED07303.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Alicyclobacillus acidocaldarius LAA1]
          Length = 365

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 46/188 (24%), Gaps = 11/188 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            A   ++  SGG DSS            V  +        + +        +   ++   
Sbjct: 1   MATRVVVGMSGGVDSSVTALLLKQAGYDVIGVFMKNWD--ETDENGACTAEQDFEDVRRV 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +      + +            + ++   + +    PN  V     I        A  L
Sbjct: 59  CEQIGIPYYGVN---FEREYEERVFQHFLEEFRRGRTPNPDVLCNREIKFKELLACALDL 115

Query: 127 GITNIVIGVCETDYSGYP------DCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           G   +  G                  R            L          P+  L K E 
Sbjct: 116 GADYLATGHYAQVRQLEDGSVALVRGRDKNKDQTYFLHMLTQAPLRRAMFPIGHLTKPEV 175

Query: 181 WKLAQDIG 188
            ++A+D G
Sbjct: 176 RQIARDHG 183


>gi|187922695|ref|YP_001894337.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia phytofirmans PsJN]
 gi|229486336|sp|B2SX74|MNMA_BURPP RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|187713889|gb|ACD15113.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia phytofirmans PsJN]
          Length = 383

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/158 (13%), Positives = 39/158 (24%), Gaps = 5/158 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS       ++   V  L     + +     C         + +   
Sbjct: 3   KQKVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDSEYCSTRQ-----DWIDVV 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +      +            +      +      PN  V     I        A  LG
Sbjct: 58  SVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLG 117

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH 165
              I  G          + R + ++A +   +     H
Sbjct: 118 AETIATGHYARVRQNERNGRFELLKAFDHTKDQSYFLH 155


>gi|31544324|ref|NP_852902.1| multifunctional FAD synthetase/riboflavin kinase/tRNA-specific
           2-thiouridylase [Mycoplasma gallisepticum str. R(low)]
 gi|81572856|sp|Q7NBZ0|MNMA_MYCGA RecName: Full=Trifunctional protein ribF/mnmA; Includes: RecName:
           Full=FMN adenylyltransferase; AltName: Full=FAD
           pyrophosphorylase; AltName: Full=FAD synthase; Includes:
           RecName: Full=Riboflavin kinase; AltName:
           Full=Flavokinase; Includes: RecName: Full=tRNA-specific
           2-thiouridylase mnmA
 gi|31541168|gb|AAP56470.1| Trifunctional protein RibF/TrmU (FAD synthetase, Riboflavin kinase,
           tRNA-specific 2-thiouridylase) [Mycoplasma gallisepticum
           str. R(low)]
 gi|284930363|gb|ADC30302.1| Trifunctional protein RibF/TrmU (FAD synthetase, Riboflavin kinase,
           tRNA-specific 2-thiouridylase) [Mycoplasma gallisepticum
           str. R(high)]
          Length = 657

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 14/32 (43%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVET 37
           ++ P  ++  SGG DS+ C      +   V  
Sbjct: 284 QEKPKVVVALSGGVDSAVCAYLLQQQGYDVVA 315


>gi|317176819|dbj|BAJ54608.1| argininosuccinate synthase [Helicobacter pylori F16]
          Length = 350

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +KK   AL LFSGG DS   +   +D+   V  L F+ G
Sbjct: 1  MKKI-KALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38


>gi|317010295|gb|ADU84042.1| tRNA methyltransferase [Helicobacter pylori SouthAfrica7]
          Length = 350

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +KK   AL LFSGG DS   +   +D+   V  L F+ G
Sbjct: 1  MKKI-KALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38


>gi|312869501|ref|ZP_07729656.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus oris PB013-T2-3]
 gi|311094948|gb|EFQ53237.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus oris PB013-T2-3]
          Length = 377

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 48/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS        +   V  +             C     +  
Sbjct: 1   MTD--HSHTRVVVGMSGGVDSSVTALLLKRQGYDVIGVFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + K    + +    PN  V     I      
Sbjct: 57  KDVAKVAAKIGIPYYSVN---FEKEYWDRVFKYFIAEYKKGRTPNPDVICNKEIKFKAFI 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A +LG   +  G             H    A +          L       V  PL  
Sbjct: 114 EYANQLGADYVATGHYADLKRDADGRMHLMRAADQHKDQTYFLSQLDYHQLDKVLFPLAN 173

Query: 175 LKKYETWKLAQDIG 188
             K +  ++A++ G
Sbjct: 174 YTKPQIREIAKEAG 187


>gi|308182199|ref|YP_003926326.1| hypothetical protein HPPC_00065 [Helicobacter pylori PeCan4]
 gi|308064384|gb|ADO06276.1| hypothetical protein HPPC_00065 [Helicobacter pylori PeCan4]
          Length = 350

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +KK   AL LFSGG DS   +   +D+   V  L F+ G
Sbjct: 1  MKKI-KALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38


>gi|308183811|ref|YP_003927944.1| hypothetical protein HPSJM_00075 [Helicobacter pylori SJM180]
 gi|308059731|gb|ADO01627.1| hypothetical protein HPSJM_00075 [Helicobacter pylori SJM180]
          Length = 350

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +KK   AL LFSGG DS   +   +D+   V  L F+ G
Sbjct: 1  MKKI-KALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38


>gi|302388936|ref|YP_003824757.1| GMP synthase (glutamine-hydrolyzing) [Thermosediminibacter oceani
           DSM 16646]
 gi|302199564|gb|ADL07134.1| GMP synthase (glutamine-hydrolyzing) [Thermosediminibacter oceani
           DSM 16646]
          Length = 511

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 54/188 (28%), Gaps = 22/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              AL   SGG DSS           D +  +  D+G    +  +    V +   +    
Sbjct: 216 NGRALCALSGGVDSSVAAVITHRALGDNLTCIFVDHG---LLRKDEARKVIETFKDKFHI 272

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                            ++     +     +++    P          F+      A +L
Sbjct: 273 -----------------NLIAVDASDRFLKRLEGVTDPEAKRRIIGEEFIRVFEDEAKKL 315

Query: 127 G-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           G I  +V G    D           I+       L  + +  +  PL  L K E  K+  
Sbjct: 316 GKIDFLVQGTLYPDVIESGTQTAAVIKTHHNVGGLPQDLNFELIEPLRDLFKDEVRKVGL 375

Query: 186 DIGGQDLV 193
            +G  + +
Sbjct: 376 QLGLPEEI 383


>gi|298737103|ref|YP_003729633.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Helicobacter pylori B8]
 gi|298356297|emb|CBI67169.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Helicobacter pylori B8]
          Length = 350

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +KK   AL LFSGG DS   +   +D+   V  L F+ G
Sbjct: 1  MKKI-KALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38


>gi|262306051|gb|ACY45618.1| gln amidotransferase [Hadrurus arizonensis]
          Length = 196

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 5/73 (6%)

Query: 8   APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               L+L SGG DS+ C +      + D+V  +  D G   K E        +K+   + 
Sbjct: 43  NNRVLMLVSGGVDSTVCAALLHKALKEDQVIAIHIDNGFMRKNESVQVEQSLRKLGLKLQ 102

Query: 66  KWKDSLGEDHILP 78
               S    H   
Sbjct: 103 VINAS---HHFYD 112


>gi|254778749|ref|YP_003056854.1| hypothetical protein HELPY_0011 [Helicobacter pylori B38]
 gi|254000660|emb|CAX28569.1| Conserved hypothetical protein; putative signal peptide
          [Helicobacter pylori B38]
          Length = 350

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +KK   AL LFSGG DS   +   +D+   V  L F+ G
Sbjct: 1  MKKI-KALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38


>gi|217969633|ref|YP_002354867.1| tRNA-specific 2-thiouridylase MnmA [Thauera sp. MZ1T]
 gi|217506960|gb|ACK53971.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thauera sp. MZ1T]
          Length = 365

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 53/188 (28%), Gaps = 14/188 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DS+        +  +V  L     + +     C     + +V++      
Sbjct: 2   KVVVGMSGGVDSAVTALLLKRQGYQVTGLFMKNWEDDDDSEYCSTR--QDLVDVASVCDV 59

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              +  ++            +  +   + +    PN  V   + I        A +LG  
Sbjct: 60  IGIDLEVVN---FSAEYKDRVFADFLHEYEAGRTPNPDVLCNSEIKFRCFLDHAMQLGAE 116

Query: 130 NIVIGVCETDYSGYPDCRHDTI---------RAIETAINLGMESHVTVHTPLMWLKKYET 180
            I  G          D R +                   L  E       PL  L K E 
Sbjct: 117 RIATGHYAQVREWANDGRSEYQLLKAEDGTKDQSYFLYRLNQEQLAKTMFPLGALYKREV 176

Query: 181 WKLAQDIG 188
            ++A + G
Sbjct: 177 RRIAAEAG 184


>gi|217031756|ref|ZP_03437260.1| hypothetical protein HPB128_155g69 [Helicobacter pylori B128]
 gi|216946603|gb|EEC25203.1| hypothetical protein HPB128_155g69 [Helicobacter pylori B128]
          Length = 191

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +KK   AL LFSGG DS   +   +D+   V  L F+ G
Sbjct: 1  MKKI-KALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38


>gi|208433988|ref|YP_002265654.1| arginino succinate synthase [Helicobacter pylori G27]
 gi|208431917|gb|ACI26788.1| arginino succinate synthase [Helicobacter pylori G27]
          Length = 350

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +KK   AL LFSGG DS   +   +D+   V  L F+ G
Sbjct: 1  MKKI-KALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38


>gi|207108720|ref|ZP_03242882.1| hypothetical protein HpylH_04534 [Helicobacter pylori
          HPKX_438_CA4C1]
          Length = 178

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +KK   AL LFSGG DS   +   +D+   V  L F+ G
Sbjct: 1  MKKI-KALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38


>gi|207092202|ref|ZP_03239989.1| hypothetical protein HpylHP_04230 [Helicobacter pylori
          HPKX_438_AG0C1]
          Length = 350

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +KK   AL LFSGG DS   +   +D+   V  L F+ G
Sbjct: 1  MKKI-KALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38


>gi|109948168|ref|YP_665396.1| tRNA methyltransferase [Helicobacter acinonychis str. Sheeba]
 gi|109715389|emb|CAK00397.1| tRNA methyltransferase [Helicobacter acinonychis str. Sheeba]
          Length = 350

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +KK   AL LFSGG DS   +   +D+   V  L F+ G
Sbjct: 1  MKKI-KALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38


>gi|108562438|ref|YP_626754.1| hypothetical protein HPAG1_0013 [Helicobacter pylori HPAG1]
 gi|107836211|gb|ABF84080.1| argininosuccinate synthase [Helicobacter pylori HPAG1]
          Length = 350

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +KK   AL LFSGG DS   +   +D+   V  L F+ G
Sbjct: 1  MKKI-KALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38


>gi|15644646|ref|NP_206815.1| hypothetical protein HP0013 [Helicobacter pylori 26695]
 gi|2313087|gb|AAD07083.1| predicted coding region HP0013 [Helicobacter pylori 26695]
          Length = 350

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +KK   AL LFSGG DS   +   +D+   V  L F+ G
Sbjct: 1  MKKI-KALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38


>gi|312884942|ref|ZP_07744632.1| thiamine biosynthesis protein ThiI [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367419|gb|EFP94981.1| thiamine biosynthesis protein ThiI [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 482

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  +V    F+ G            +   + ++       
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGG-------SAHEI--GVKQVAHYLWSK 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G       +       S   + V  +I +             +F+  A  +A +  I  
Sbjct: 231 YG-------SSAKVRFISVDFEPVVAEILEKVDDGQMGVILKRMFMRAAGIIAEKFAIQG 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K +   LA++IG +
Sbjct: 284 LVTGEAIGQVSSQTLTNLRHIDGVTDRL---------ILRPLINWDKEDIINLAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|262408193|ref|ZP_06084740.1| tRNA methyl transferase [Bacteroides sp. 2_1_22]
 gi|294806750|ref|ZP_06765577.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides xylanisolvens SD CC 1b]
 gi|262353745|gb|EEZ02838.1| tRNA methyl transferase [Bacteroides sp. 2_1_22]
 gi|294446032|gb|EFG14672.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides xylanisolvens SD CC 1b]
          Length = 361

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/192 (8%), Positives = 48/192 (25%), Gaps = 11/192 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + ++    L+  SGG DS+       ++   +  ++         E +    + +++   
Sbjct: 1   MEERNKRVLVGMSGGIDSTATCLMLQEQGYEIVGVTMRVWGD---EPQDARELAERMGIE 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                + +     +    + +                  + N     R +         A
Sbjct: 58  HYVADERIPFKETIVKNFIDEYKQGRTPNP-------CVMCNPLFKFRVLTEWADKLNCA 110

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           +        +     +            ++      LG +       PL    K +  + 
Sbjct: 111 WVATGHYSRLEEKNGNIYIVAGDDDKKDQSYF-LWRLGQDVLKRCIFPLGDYTKVKVREY 169

Query: 184 AQDIGGQDLVNL 195
             + G +     
Sbjct: 170 LAEKGYEAKSKE 181


>gi|237749831|ref|ZP_04580311.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Helicobacter bilis ATCC 43879]
 gi|229374581|gb|EEO24972.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Helicobacter bilis ATCC 43879]
          Length = 347

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 51/182 (28%), Gaps = 15/182 (8%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +      LL SGG DSS        +   V  +   Y + +  E +  + +R      
Sbjct: 1   MEQNKKKVALLMSGGVDSSYSAYLLQQQGYEVLGI---YLKLHDKEEKHAVFIRN----- 52

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
             K  + LG +  +      +    ++        +    PN       ++    A   A
Sbjct: 53  CEKVCEFLGLEFKIIE--AKEEFKKAVYNEFIESYKRGETPNPCALCNPLMKFGLALNAA 110

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDT-----IRAIETAINLGMESHVTVHTPLMWLKKY 178
              G   I  G      S     R                 +  ++   +  PL  + K 
Sbjct: 111 LGYGCEYIATGHYARIISIDGIKRIQEARDKSKDQSYFLYAISQDAINRLIFPLGDMLKE 170

Query: 179 ET 180
           E 
Sbjct: 171 EV 172


>gi|82702172|ref|YP_411738.1| argininosuccinate synthase [Nitrosospira multiformis ATCC 25196]
 gi|119361297|sp|Q2YA75|ASSY_NITMU RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|82410237|gb|ABB74346.1| argininosuccinate synthase [Nitrosospira multiformis ATCC 25196]
          Length = 407

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 60/184 (32%), Gaps = 13/184 (7%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKK 59
           MN  + +    +L FSGG D+S  L W  D +   V T + D GQ  +VE        K+
Sbjct: 1   MN--VAQIKKVVLAFSGGLDTSVILKWLQDTYRCEVVTFTADIGQGEEVEP--ARAKAKQ 56

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +  +   + D L E+ +            + T      +   ++    +  R I      
Sbjct: 57  LG-VREIFIDDLREEFVRDFVF---PMFRANTLYEGEYLLGTSIARPLIAKRQIEIARET 112

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV----HTPLMWL 175
              A   G T         +   Y       + A     +L     +      H   + +
Sbjct: 113 GADAVSHGATGKGNDQVRFELGYYALQPDIRVIAPWREWDLTSREKLLKYAEQHGIPVEM 172

Query: 176 KKYE 179
           KK E
Sbjct: 173 KKKE 176


>gi|13626768|sp|O26806|GUAAB_METTH RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
           AltName: Full=GMP synthetase
          Length = 308

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 56/184 (30%), Gaps = 28/184 (15%)

Query: 8   APSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              A++  SGG DSS     A     D +  +  D+G   + E      VRK   E +  
Sbjct: 21  NEKAIIALSGGVDSSVASVLAGRAIGDNLTAVFVDHGLLREGE---AEYVRKTFSERL-- 75

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                            +  +   ++    +++    P         +F+     +A  +
Sbjct: 76  -----------------NFRYIDASEEFLKELEGVTDPEEKRKIIGRVFIEVFERVAEEI 118

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   +V G              +        + L     + +  P+  L K E  ++  +
Sbjct: 119 GARYLVQGTIA-----PDWIESEGQIKSHHNVALPHGLVLEIVEPIRELYKDEVREIGLE 173

Query: 187 IGGQ 190
           +G  
Sbjct: 174 LGLP 177


>gi|15678737|ref|NP_275853.1| GMP synthase subunit B [Methanothermobacter thermautotrophicus str.
           Delta H]
 gi|2621797|gb|AAB85215.1| GMP synthetase, subunit B [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 311

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 56/184 (30%), Gaps = 28/184 (15%)

Query: 8   APSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              A++  SGG DSS     A     D +  +  D+G   + E      VRK   E +  
Sbjct: 24  NEKAIIALSGGVDSSVASVLAGRAIGDNLTAVFVDHGLLREGE---AEYVRKTFSERL-- 78

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                            +  +   ++    +++    P         +F+     +A  +
Sbjct: 79  -----------------NFRYIDASEEFLKELEGVTDPEEKRKIIGRVFIEVFERVAEEI 121

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   +V G              +        + L     + +  P+  L K E  ++  +
Sbjct: 122 GARYLVQGTIA-----PDWIESEGQIKSHHNVALPHGLVLEIVEPIRELYKDEVREIGLE 176

Query: 187 IGGQ 190
           +G  
Sbjct: 177 LGLP 180


>gi|330811341|ref|YP_004355803.1| argininosuccinate synthase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379449|gb|AEA70799.1| Argininosuccinate synthase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 405

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 59/205 (28%), Gaps = 13/205 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +         + T      +   ++    +  R I         A
Sbjct: 61  ------YIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN------LGMESHVTVHTPLMWLKK 177
              G T         +   Y       + A     +      L   +           KK
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHAIPIERHGKK 174

Query: 178 YETWKLAQDIGGQDLVNLILEESHT 202
              + +  ++        +LE++ T
Sbjct: 175 KSPYSMDANLLHISYEGGVLEDTWT 199


>gi|312959246|ref|ZP_07773764.1| Argininosuccinate synthase [Pseudomonas fluorescens WH6]
 gi|311286506|gb|EFQ65069.1| Argininosuccinate synthase [Pseudomonas fluorescens WH6]
          Length = 405

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 59/205 (28%), Gaps = 13/205 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +         + T      +   ++    +  R I         A
Sbjct: 61  ------YIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN------LGMESHVTVHTPLMWLKK 177
              G T         +   Y       + A     +      L   +           KK
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHAIPIERHGKK 174

Query: 178 YETWKLAQDIGGQDLVNLILEESHT 202
              + +  ++        +LE++ T
Sbjct: 175 KSPYSMDANLLHISYEGGVLEDTWT 199


>gi|229588695|ref|YP_002870814.1| argininosuccinate synthase [Pseudomonas fluorescens SBW25]
 gi|259585366|sp|C3KBZ2|ASSY_PSEFS RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|229360561|emb|CAY47418.1| argininosuccinate synthase [Pseudomonas fluorescens SBW25]
          Length = 405

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 59/205 (28%), Gaps = 13/205 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +         + T      +   ++    +  R I         A
Sbjct: 61  ------YIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN------LGMESHVTVHTPLMWLKK 177
              G T         +   Y       + A     +      L   +           KK
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHAIPIERHGKK 174

Query: 178 YETWKLAQDIGGQDLVNLILEESHT 202
              + +  ++        +LE++ T
Sbjct: 175 KSPYSMDANLLHISYEGGVLEDTWT 199


>gi|210134212|ref|YP_002300651.1| argininosuccinate synthase [Helicobacter pylori P12]
 gi|210132180|gb|ACJ07171.1| argininosuccinate synthase [Helicobacter pylori P12]
          Length = 350

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +KK   AL LFSGG DS   +   +D+   V  L F+ G
Sbjct: 1  MKKI-KALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38


>gi|77460738|ref|YP_350245.1| argininosuccinate synthase [Pseudomonas fluorescens Pf0-1]
 gi|119361310|sp|Q3K7K0|ASSY_PSEPF RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|77384741|gb|ABA76254.1| argininosuccinate synthase [Pseudomonas fluorescens Pf0-1]
          Length = 405

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 59/205 (28%), Gaps = 13/205 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +         + T      +   ++    +  R I         A
Sbjct: 61  ------YIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN------LGMESHVTVHTPLMWLKK 177
              G T         +   Y       + A     +      L   +           KK
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHAIPIERHGKK 174

Query: 178 YETWKLAQDIGGQDLVNLILEESHT 202
              + +  ++        +LE++ T
Sbjct: 175 KSPYSMDANLLHISYEGGVLEDTWT 199


>gi|313672100|ref|YP_004050211.1| gmp synthase (glutamine-hydrolyzing) [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312938856|gb|ADR18048.1| GMP synthase (glutamine-hydrolyzing) [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 516

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 47/185 (25%), Gaps = 18/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS       +   D++  +  + G    +       V K   +    
Sbjct: 219 EKKVLCALSGGVDSSVAAVLVHEAIGDQLICVFVNNG---LLRYREAEQVLKTFRDNFK- 274

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     + L  +              + +        +  R              L
Sbjct: 275 ----------INLIYVDAEDRFLEALRDIEEPEKKRKTIGNLFIRIFEEEAKKLGDFEFL 324

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+     P      I+       L  +    +  PL  L K E  K+  +
Sbjct: 325 VQGTLYPDVIESVSFKGPSAT---IKTHHNVGGLPEDMKFKLIEPLRELFKDEVRKVGLE 381

Query: 187 IGGQD 191
           +G  +
Sbjct: 382 LGLSE 386


>gi|312961679|ref|ZP_07776177.1| tRNA-specific 2-thiouridylase [Pseudomonas fluorescens WH6]
 gi|311283938|gb|EFQ62521.1| tRNA-specific 2-thiouridylase [Pseudomonas fluorescens WH6]
          Length = 374

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 48/187 (25%), Gaps = 10/187 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +    ++  SGG DSS      +++   VE L     + +     C       + +    
Sbjct: 10  QKKRVIVGMSGGVDSSVSAVLLMEQGYEVEGLFMKNWEEDDGTEYC--TAMDDLADAQAV 67

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H        +   +     +A            +  R  I        A  L
Sbjct: 68  CDKIGIKLHT--ANFAAEYWDNVFEHFLAEYKAGRTPNPDILCNRE-IKFKAFLDYAMML 124

Query: 127 GITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           G   I  G                              +G E       P+  L+K E  
Sbjct: 125 GADLIATGHYVRRRDIDGRTELLKGLDPNKDQSYFLHAVGGEQIAKTLFPVGELEKPEVR 184

Query: 182 KLAQDIG 188
           ++A+  G
Sbjct: 185 RIAEQHG 191


>gi|326479673|gb|EGE03683.1| argininosuccinate synthase [Trichophyton equinum CBS 127.97]
          Length = 415

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 47/154 (30%), Gaps = 11/154 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + +    LL +SGG D+S  L+W L++   V     D GQ    + +        +    
Sbjct: 1   MAQKEKVLLAYSGGLDTSCILAWLLEQGHEVVCFLADVGQ--AEDFKEAERKALAVGA-K 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL-A 123
               + L ++ +  L       +       A+      L    V  R ++ +       A
Sbjct: 58  KLVVEDLKKEFVEDLCFKAIQCN-------AIWEDRYLLGARPVIARAMMRVAQQEGCTA 110

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA 157
              G T         + + Y       + A    
Sbjct: 111 VSHGCTGKGNDQVRFELAFYAIQPSINVIAPWRM 144


>gi|327308140|ref|XP_003238761.1| argininosuccinate synthetase [Trichophyton rubrum CBS 118892]
 gi|326459017|gb|EGD84470.1| argininosuccinate synthetase [Trichophyton rubrum CBS 118892]
          Length = 415

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 47/154 (30%), Gaps = 11/154 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + +    LL +SGG D+S  L+W L++   V     D GQ    + +        +    
Sbjct: 1   MAQKEKVLLAYSGGLDTSCILAWLLEQGHEVVCFLADVGQ--AEDFKEAERKALAVGA-K 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL-A 123
               + L ++ +  L       +       A+      L    V  R ++ +       A
Sbjct: 58  KLVVEDLKKEFVEDLCFKAIQCN-------AIWEDRYLLGARPVIARAMMRVAQQEGCTA 110

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA 157
              G T         + + Y       + A    
Sbjct: 111 VSHGCTGKGNDQVRFELAFYAIQPSINVIAPWRM 144


>gi|307823553|ref|ZP_07653782.1| argininosuccinate synthase [Methylobacter tundripaludum SV96]
 gi|307735538|gb|EFO06386.1| argininosuccinate synthase [Methylobacter tundripaludum SV96]
          Length = 404

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 58/182 (31%), Gaps = 13/182 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +    +L +SGG D+S  L W  D     V T + D GQ  +VE          I ++
Sbjct: 1   MSEINKVVLAYSGGLDTSVILKWLQDVYDCEVVTFTADLGQGEEVEPARAKAQAMGIKDI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                ++    D++ P+         + T      +   ++    +  R I         
Sbjct: 61  YIEDLREDFARDYVFPM-------FRANTVYEGEYLLGTSIARPLIAKRLIEIANETGAN 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV----TVHTPLMWLKKY 178
           A   G T         +   Y       I A     +L     +      H   + +KK 
Sbjct: 114 AISHGATGKGNDQVRFELGAYALRPDIQIIAPWREWDLTSRQTLLDYAEKHKIPVEMKKG 173

Query: 179 ET 180
           +T
Sbjct: 174 KT 175


>gi|317133301|ref|YP_004092615.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ethanoligenens harbinense YUAN-3]
 gi|315471280|gb|ADU27884.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ethanoligenens harbinense YUAN-3]
          Length = 363

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 44/193 (22%), Gaps = 8/193 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            + L   SGG DSS   +   ++   V  ++ +     +       C    + +      
Sbjct: 10  KTVLAAMSGGVDSSVTAALLKEQGASVIGITLNVWPEEENPCARSCCSVTDVDDARAVCN 69

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++L            +    A +      PN  +     +        A     
Sbjct: 70  VLGIPHYVLNT---QADFKRGVIDYFAAEYLRGRTPNPCIACNARVKFTAMLRKADEFQA 126

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             I  G           CR                 L       +  P    +K +   L
Sbjct: 127 DFIATGHYARILRDAGGCRLVRAADARKDQTYVLYMLTQTQLGRILFPCGGYEKPQIRAL 186

Query: 184 AQDIGGQDLVNLI 196
           A+  G        
Sbjct: 187 AKAFGLPTFQKTD 199


>gi|270308092|ref|YP_003330150.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Dehalococcoides sp. VS]
 gi|270153984|gb|ACZ61822.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Dehalococcoides sp. VS]
          Length = 357

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 52/192 (27%), Gaps = 13/192 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MND        ++  SGG DSS      L++   V  +S     ++  E        K I
Sbjct: 1   MND---NPGLIMVAMSGGVDSSVAAMLLLEQGYDVAGVSLQL--KSNNEPYGNGYNLKLI 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                         +++ L+ +      +   +   +      PN  +     + +    
Sbjct: 56  NRAREVAAALGIPHYVVDLSDIFSQRVIA---DFCQQYSQGRTPNPCIRCNYYVKIGALL 112

Query: 121 TLAYRLGITNIVIGVCE-----TDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
                     +  G         + +       +          L   S   +  PL   
Sbjct: 113 DKIPDFNAGYLATGHYARVLSDGNGTHLLKGADEKKDQSYFLYTLPPASLSRLMFPLGKR 172

Query: 176 KKYETWKLAQDI 187
            K +  +LA  +
Sbjct: 173 YKKDIIRLAAKM 184


>gi|78778422|ref|YP_396534.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Prochlorococcus marinus str. MIT 9312]
 gi|91206817|sp|Q31DE7|GUAA_PROM9 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|78711921|gb|ABB49098.1| GMP synthase (glutamine-hydrolyzing) [Prochlorococcus marinus str.
           MIT 9312]
          Length = 528

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 49/192 (25%), Gaps = 19/192 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSST          +++  +  D G   K E E               
Sbjct: 224 NKKVLLALSGGVDSSTLAFLLNKAIGNQLTCMFIDQGFMRKGEPEF-------------- 269

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +   +   + +  +                +           R              L
Sbjct: 270 LMNFFDKKFHIKVEYINARERFISKLKGITDPEQKRKIIGEEFIRVFEEESNRLGPFQYL 329

Query: 127 GITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
               +   V E+  +       +     I++      L  +    +  PL  L K E  K
Sbjct: 330 AQGTLYPDVIESAGTNIDPKTGERIAVKIKSHHNVGGLPKDLQFKLVEPLRKLFKDEVRK 389

Query: 183 LAQDIGGQDLVN 194
           L   +G  D + 
Sbjct: 390 LGAALGLPDEII 401


>gi|237719106|ref|ZP_04549587.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229451485|gb|EEO57276.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
          Length = 361

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/192 (8%), Positives = 48/192 (25%), Gaps = 11/192 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + ++    L+  SGG DS+       ++   +  ++         E +    + +++   
Sbjct: 1   MEERNKRVLVGMSGGIDSTATCLMLQEQGYEIVGVTMRVWGD---EPQDARELAERMGIE 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                + +     +    + +                  + N     R +         A
Sbjct: 58  HYVADERIPFKETIVKNFIDEYKQGRTPNP-------CVMCNPLFKFRVLTEWADKLNCA 110

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           +        +     +            ++      LG +       PL    K +  + 
Sbjct: 111 WVATGHYSRLEEKNGNIYIVAGDDDKKDQSYF-LWRLGQDVLKRCIFPLGDYTKVKVREY 169

Query: 184 AQDIGGQDLVNL 195
             + G +     
Sbjct: 170 LAEKGYEAKSKE 181


>gi|189463744|ref|ZP_03012529.1| hypothetical protein BACINT_00077 [Bacteroides intestinalis DSM
           17393]
 gi|189438694|gb|EDV07679.1| hypothetical protein BACINT_00077 [Bacteroides intestinalis DSM
           17393]
          Length = 359

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/193 (9%), Positives = 47/193 (24%), Gaps = 13/193 (6%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +     L+  SGG DS+       ++   +  L+         E      +   +   
Sbjct: 1   MNRPEKRVLVGMSGGIDSTATCLMLKEQGYEIVGLTMWVWGD---EPVEARQLADSMGIE 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                +      ++    + +                  + N     R +         A
Sbjct: 58  HHVADEREAFRKVIVQNFIDEYCQGRTPNP-------CVMCNPTFKFRILTEWADKLDCA 110

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW-LKKYETWK 182
           +          + E + + Y     D  +     +    +  +      +    K +  K
Sbjct: 111 FISTGH--YSHLEEKNGNIYIVAGDDDKKDQSYFLWRLGQDVLKRCLFPLGTYTKLQVRK 168

Query: 183 LAQDIGGQDLVNL 195
             ++ G Q     
Sbjct: 169 YLREKGYQLKAEE 181


>gi|307822309|ref|ZP_07652541.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylobacter tundripaludum SV96]
 gi|307736875|gb|EFO07720.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylobacter tundripaludum SV96]
          Length = 363

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 49/187 (26%), Gaps = 9/187 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +   ++  SGG DSS      L++  +V  L     + +    +C     + + +    
Sbjct: 1   MSKKVIVGMSGGVDSSVTALLLLEQGHQVTGLFMKNWEEDDGTEQC--TAMEDLADAQQV 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 E   +      +         ++            +  +++ F  F       L
Sbjct: 59  CDKLGIELKTVN--FAAEYWDEVFEVFLSEFKAGRTPNPDILCNKHVKFKAFLNYAIEDL 116

Query: 127 GITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           G   I  G          +                   LG +       P+  L K E  
Sbjct: 117 GAEYIATGHYARVSEQDCEYFLLKGLDPNKEQSYFLYTLGQKQLSRTLFPIGHLHKPEIR 176

Query: 182 KLAQDIG 188
            +A   G
Sbjct: 177 AMADKAG 183


>gi|15895957|ref|NP_349306.1| GMP synthase [Clostridium acetobutylicum ATCC 824]
 gi|24211761|sp|Q97FM9|GUAA_CLOAB RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|15025732|gb|AAK80646.1|AE007767_11 GMP synthase [Clostridium acetobutylicum ATCC 824]
 gi|325510109|gb|ADZ21745.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Clostridium acetobutylicum EA 2018]
          Length = 510

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 59/187 (31%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS            ++  +  D+G   K E +    + +K      ++
Sbjct: 216 KKVLCALSGGVDSSVAAVLVHKAIGKQLTCVFVDHGLLRKDEGDQVESIFRK------QF 269

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +L   +     +      S   +   +  ++              F+      A +LG
Sbjct: 270 DMNLIRVNAKDRFLGKLKGISDPERKRKIIGEE--------------FIRVFEEEANKLG 315

Query: 128 -ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  +V G    D          TI++      L  +    +  PL  L K E   + ++
Sbjct: 316 QIDFLVQGTIYPDVVESGTDTSATIKSHHNVGGLPEDMQFELIEPLRELFKDEVRAVGEE 375

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 376 LGIPHKL 382


>gi|83942044|ref|ZP_00954506.1| argininosuccinate synthase [Sulfitobacter sp. EE-36]
 gi|83847864|gb|EAP85739.1| argininosuccinate synthase [Sulfitobacter sp. EE-36]
          Length = 406

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 49/158 (31%), Gaps = 7/158 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W   +    V T + D GQ  ++E         +++  
Sbjct: 1   MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEPARAKA---EMMGA 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + + + E+ +            +      + +   ++    +  R +         A
Sbjct: 58  SEIYVEDVREEFVRDFVF---PMFRANAVYEGLYLLGTSIARPLISKRLVEIAAETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
              G T         + + Y       + A     +L 
Sbjct: 115 VAHGATGKGNDQVRFELAAYALNPDIKVIAPWREWDLS 152


>gi|83953093|ref|ZP_00961815.1| argininosuccinate synthase [Sulfitobacter sp. NAS-14.1]
 gi|83842061|gb|EAP81229.1| argininosuccinate synthase [Sulfitobacter sp. NAS-14.1]
          Length = 406

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 49/158 (31%), Gaps = 7/158 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W   +    V T + D GQ  ++E         +++  
Sbjct: 1   MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEPARAKA---EMMGA 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + + + E+ +            +      + +   ++    +  R +         A
Sbjct: 58  SEIYVEDVREEFVRDFVF---PMFRANAVYEGLYLLGTSIARPLISKRLVEIAAETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
              G T         + + Y       + A     +L 
Sbjct: 115 VAHGATGKGNDQVRFELAAYALNPDIKVIAPWREWDLS 152


>gi|99082723|ref|YP_614877.1| argininosuccinate synthase [Ruegeria sp. TM1040]
 gi|119361324|sp|Q1GCK1|ASSY_SILST RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|99039003|gb|ABF65615.1| argininosuccinate synthase [Ruegeria sp. TM1040]
          Length = 407

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 44/157 (28%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W   +    V T + D GQ  ++E        + +   
Sbjct: 1   MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEP--ARKKAELLGIK 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                     +  +           +      + +   ++    +  R +         A
Sbjct: 59  PENIFIEDIREEFV--RDFVFPMFRANAVYEGLYLLGTSIARPLISKRLVEIAEATGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         + S Y       + A     +L
Sbjct: 117 VSHGATGKGNDQVRFELSAYALNPDIKVIAPWREWDL 153


>gi|300856861|ref|YP_003781845.1| GMP synthase [Clostridium ljungdahlii DSM 13528]
 gi|300436976|gb|ADK16743.1| GMP synthase [Clostridium ljungdahlii DSM 13528]
          Length = 510

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 57/187 (30%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS            ++  +  D+G   K E +    V KK  ++   
Sbjct: 215 NKKVICAMSGGVDSSVAAVLVHKAVGKQLTCIFVDHGLLRKDEGDQVEHVFKKQFDMNFI 274

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             ++           LG +   S  +     I +  +       R +  + F        
Sbjct: 275 RVNAKDR-------FLGKLEGVSDPEKKRKIIGEEFIRVFEEEARKLGDISF-------- 319

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +V G    D          TI++      L  +    +  PL  L K E   + ++
Sbjct: 320 ----LVQGTIYPDVVESGLGTSATIKSHHNVGGLPEDMDFKLIEPLRELFKDEVRAVGEE 375

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 376 LGIPHKL 382


>gi|283781603|ref|YP_003372358.1| argininosuccinate synthase [Pirellula staleyi DSM 6068]
 gi|283440056|gb|ADB18498.1| argininosuccinate synthase [Pirellula staleyi DSM 6068]
          Length = 404

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 4/58 (6%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
          PS +L +SGG D+S  L W  D    V  +  D GQ      E R  + KK  +   K
Sbjct: 2  PSCVLAYSGGLDTSVILGWLQDEGYEVHAVYVDLGQ----PCEDRQAILKKARDCGAK 55


>gi|213409796|ref|XP_002175668.1| argininosuccinate synthase [Schizosaccharomyces japonicus yFS275]
 gi|212003715|gb|EEB09375.1| argininosuccinate synthase [Schizosaccharomyces japonicus yFS275]
          Length = 411

 Score = 53.0 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 38/91 (41%), Gaps = 7/91 (7%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
          M++   +    +L +SGG D+S  L+W +++   V     + GQ  + + E       K+
Sbjct: 1  MSET--QVKRCVLAYSGGLDTSCILAWLIEQGWEVICYMANVGQ--EEDWEAAREKALKV 56

Query: 61 VE---LMPKWKDSLGEDHILPLAILGDISHS 88
                +   ++    D ++P A    I  +
Sbjct: 57 GAKKVYIEDLREEFIRDTVIPAAQCNAIYEN 87


>gi|313675632|ref|YP_004053628.1| argininosuccinate synthase [Marivirga tractuosa DSM 4126]
 gi|312942330|gb|ADR21520.1| argininosuccinate synthase [Marivirga tractuosa DSM 4126]
          Length = 397

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 28/75 (37%), Gaps = 1/75 (1%)

Query: 9  PSALLLFSGGQDSS-TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             +L +SGG D++   L  + +    V  +  + G  +  EL+      KK+       
Sbjct: 2  KKVVLAYSGGLDTTFCGLYLSKELGYEVHAVLVNTGGFSSEELKAVDAKAKKLGIASFTV 61

Query: 68 KDSLGEDHILPLAIL 82
           D L   +   +  L
Sbjct: 62 IDCLETFYQNVIRFL 76


>gi|259503176|ref|ZP_05746078.1| argininosuccinate synthase [Lactobacillus antri DSM 16041]
 gi|259168833|gb|EEW53328.1| argininosuccinate synthase [Lactobacillus antri DSM 16041]
          Length = 414

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/178 (13%), Positives = 48/178 (26%), Gaps = 13/178 (7%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M  I+      +L +SGG D+S  ++W +++   V     D G+   +E   +       
Sbjct: 1   METIVMAKEKIVLAYSGGLDTSVAIAWLMNKGYDVIACCIDVGEGLDLEAIQQKAAA--- 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                     +G    + +    D +   +   + +                 + +    
Sbjct: 58  ----------IGAWKSVVIDAKRDFAEQFVLPALQVHAMYEQKYPLVSALSRPLIVQKLV 107

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            +A   G T I  G                  A E  I   +          +   K 
Sbjct: 108 GVAKEYGATAIAHGCTGKGNDQVRFEAGIHALAPEMKIEDPIRDWHWSREEEIQYAKD 165


>gi|328955218|ref|YP_004372551.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Coriobacterium glomerans PW2]
 gi|328455542|gb|AEB06736.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Coriobacterium glomerans PW2]
          Length = 380

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 32/136 (23%), Gaps = 5/136 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVE 62
           + +  S L+  SGG DSS      L+R       +           + E        + +
Sbjct: 1   MTRKQSVLVAMSGGVDSSVAAHLLLERGYTCIGATMSLYDETTMGRDPEGICGCADDVAD 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     E  +     L +           +  +  N             L      
Sbjct: 61  ARAVCARLGIEHRVFDFKDLFERRVIDRFVEQYLSGRTPNPCADCNRALKFGAL---LDR 117

Query: 123 AYRLGITNIVIGVCET 138
           A  +G   I  G    
Sbjct: 118 ALEIGCDFIATGHYAR 133


>gi|259418011|ref|ZP_05741930.1| argininosuccinate synthase [Silicibacter sp. TrichCH4B]
 gi|259346917|gb|EEW58731.1| argininosuccinate synthase [Silicibacter sp. TrichCH4B]
          Length = 407

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 45/157 (28%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W   +    V T + D GQ  ++E        + +   
Sbjct: 1   MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEP--ARKKAELLGIK 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                     +  +           +      + +   ++    +  R +     +   A
Sbjct: 59  PENIFIEDIREEFV--RDFVFPMFRANAVYEGLYLLGTSIARPLISKRLVEIAEASGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         + S Y       + A     +L
Sbjct: 117 VSHGATGKGNDQVRFELSAYALNPDIKVIAPWREWDL 153


>gi|228993134|ref|ZP_04153056.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus pseudomycoides DSM 12442]
 gi|228999183|ref|ZP_04158765.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus mycoides Rock3-17]
 gi|229006731|ref|ZP_04164365.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus mycoides Rock1-4]
 gi|228754592|gb|EEM04003.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus mycoides Rock1-4]
 gi|228760800|gb|EEM09764.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus mycoides Rock3-17]
 gi|228766593|gb|EEM15234.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus pseudomycoides DSM 12442]
          Length = 376

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 54/194 (27%), Gaps = 13/194 (6%)

Query: 3   DIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           D++ K P     ++  SGG DSS       ++   V  +             C     + 
Sbjct: 4   DMMNKLPHETRVVIGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGFC--TATED 61

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
             +++          + +            +      + +    PN  V     I     
Sbjct: 62  YNDVIEVCNQIGIPYYAVN---FEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAF 118

Query: 120 ATLAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
              A  LG   +  G           Y   R       +T     L  E       PL  
Sbjct: 119 LEHAIALGADYVATGHYARVAYIDGEYKMLRGVDDNKDQTYFLNQLSQEQLSKTMFPLGE 178

Query: 175 LKKYETWKLAQDIG 188
           LKK +  ++A++ G
Sbjct: 179 LKKPQIREMAKEAG 192


>gi|47459275|ref|YP_016137.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycoplasma mobile 163K]
 gi|81614195|sp|Q6KHK4|MNMA_MYCMO RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|47458604|gb|AAT27926.1| tRNA-methyltransferase (5-methylaminomethyl-2-thiouridylate)
           [Mycoplasma mobile 163K]
          Length = 370

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 50/185 (27%), Gaps = 8/185 (4%)

Query: 10  SALLLFSGGQDSSTCLSWAL-DRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKW 67
             ++  SGG DSS         +   V  +   ++      ++     + + I      W
Sbjct: 3   KIVVALSGGVDSSVTAFILKYQQNHEVIAVFMRNWDSFANNDILGNEDINQDICPQEKDW 62

Query: 68  KD-----SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +D     S     I  +  + +      T  +    Q           + I F  F   +
Sbjct: 63  EDAKKIASQLNIPIYRVDFVKEYYDEVFTYLIEEYRQGRTPNPDIFCNKYIKFGKFIEYV 122

Query: 123 AYRLGITNIVIGVCET-DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
                   I  G     + S     +            L  +    +  PL  L K    
Sbjct: 123 EKNFNPDFIATGHYAKVENSLLYRAKDRNKDQSYFLSQLSSDQLKKIIFPLKDLTKDVIR 182

Query: 182 KLAQD 186
           K+A +
Sbjct: 183 KIAAE 187


>gi|28211997|ref|NP_782941.1| GMP synthase [Clostridium tetani E88]
 gi|44887955|sp|Q891G7|GUAA_CLOTE RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|28204440|gb|AAO36878.1| GMP synthase (glutamine-hydrolyzing) [Clostridium tetani E88]
          Length = 510

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 57/187 (30%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS           D++  +  D+G   K E +    + K+        
Sbjct: 216 KKVICALSGGVDSSVAAVIVHKAIGDQLTCIFVDHGLLRKDEGDQVESIFKE-------- 267

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                           ++   +       K++    P          F+      A +LG
Sbjct: 268 ------------KFQMNLIRVNAQDRFLGKLKGVTEPERKRKIIGEEFIRVFEEEANKLG 315

Query: 128 -ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  +V G    D          TI++      L  +    +  PL  L K E  ++ ++
Sbjct: 316 KIDYLVQGTIYPDVVESGTDTSATIKSHHNVGGLPEDIEFELIEPLRELFKDEVRRVGEE 375

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 376 LGIPHKL 382


>gi|284097781|ref|ZP_06385771.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Poribacteria sp. WGA-A3]
 gi|283830707|gb|EFC34827.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Poribacteria sp. WGA-A3]
          Length = 372

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 47/182 (25%), Gaps = 12/182 (6%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYG----QRNKVELECRLCVRKKIVELMPKWKDS 70
            SGG DSS       ++   V+ ++            V  +       K+          
Sbjct: 1   MSGGVDSSVAALLLTEQGYDVQGVTLQVWEPEDDNAAVTKKWEERGCCKVGLARHVAGRL 60

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                ++      +    ++  +          PN  V     +       LA   GI  
Sbjct: 61  GIPHEVVDT---RETFRKNVIDDFVAGYLGGTTPNPCVRCNEWVKFGGLYELAKDRGIDF 117

Query: 131 IVIGVCET-----DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +  G         +  G                 L       +  P+  L+K E W  A+
Sbjct: 118 VATGHYARVVPVDEGVGLFRGADGKKDQSYFLYRLPAAWLPHILFPVGHLQKTEVWARAE 177

Query: 186 DI 187
           ++
Sbjct: 178 EL 179


>gi|89052558|ref|YP_508009.1| argininosuccinate synthase [Jannaschia sp. CCS1]
 gi|119361282|sp|Q28WC8|ASSY_JANSC RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|88862107|gb|ABD52984.1| argininosuccinate synthase [Jannaschia sp. CCS1]
          Length = 407

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 52/178 (29%), Gaps = 11/178 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W   +    V T + D GQ  ++E        +K  E+
Sbjct: 1   MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEP------ARKKAEM 54

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           M      + +     +         +      + +   ++    +  R +         A
Sbjct: 55  MGAAGIYVEDLREEFVRDFVFPMFRANALYEGLYLLGTSIARPLISKRLVEIAEETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV----TVHTPLMWLKK 177
              G T         +   Y       + A      LG  + +      H   +   K
Sbjct: 115 VSHGATGKGNDQVRFELCAYSLNPEIEVIAPWRKWELGSRTKLIEFAEKHQIPIAKDK 172


>gi|313204364|ref|YP_004043021.1| argininosuccinate synthase [Paludibacter propionicigenes WB4]
 gi|312443680|gb|ADQ80036.1| argininosuccinate synthase [Paludibacter propionicigenes WB4]
          Length = 399

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 46/172 (26%), Gaps = 12/172 (6%)

Query: 7   KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                LL FSGG D S   +  A ++   V T   + G  ++ EL+       ++     
Sbjct: 1   MKEKVLLAFSGGLDTSFCAMYLAQEKGYEVHTAVANTGGFSEDELKVIEDKAFRLGAKSH 60

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                      + L +  +    S+   V   +  N      V    I   +     A  
Sbjct: 61  -----------VALDVTQEYYEKSIKYMVFGNVLRNGTYPISVSSERIFQAIAIINYAKE 109

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
           +G   +  G                + A    I       V      +   K
Sbjct: 110 IGADYVAHGSTGAGNDQVRFDLTFDVLAPGIKILTPTRDMVLTREYEIDYLK 161


>gi|227509407|ref|ZP_03939456.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus brevis subsp. gravesensis ATCC 27305]
 gi|227191119|gb|EEI71186.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus brevis subsp. gravesensis ATCC 27305]
          Length = 374

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 45/194 (23%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS        +   V  +             C     +  
Sbjct: 1   MQD--NSQTRVVVGMSGGVDSSVVAYLLKQQGYDVIGVFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            +      + +    P+  V     I      
Sbjct: 57  KDVAKVANKIGIPYYSVN---FEKEYWDRVFTYFLDEYKKGRTPDPDVICNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A  LG   I  G             H    +            L       V  P+  
Sbjct: 114 DYALELGADYIATGHYAQLTRDEDGHNHLLRASDGNKDQTYFLSQLSANQLDRVMFPIGN 173

Query: 175 LKKYETWKLAQDIG 188
           L K E  ++A+  G
Sbjct: 174 LVKPEVREIARKAG 187


>gi|134298633|ref|YP_001112129.1| tRNA-specific 2-thiouridylase MnmA [Desulfotomaculum reducens MI-1]
 gi|172044262|sp|A4J2K1|MNMA_DESRM RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|134051333|gb|ABO49304.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Desulfotomaculum reducens MI-1]
          Length = 367

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/200 (11%), Positives = 54/200 (27%), Gaps = 13/200 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV---ELECRLCVRKKIV 61
           +      L+  SGG DSS   +    +   +  ++            +     C    + 
Sbjct: 1   MAIQKRVLVAMSGGVDSSVTAALLQQQGYDIVGVTMQIWDPEVTVVGDDYVGCCSLTAVD 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +            ++L      ++    + +    +      PN  +     I       
Sbjct: 61  DARRVANVLGIPYYVLN---FRELFTEKVIQYFVDEYFQGRTPNPCIACNRFIKFEALLQ 117

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-------ESHVTVHTPLMW 174
            A ++G   I  G            R+   +A++   +          +       PL  
Sbjct: 118 RARQMGFDYIATGHYARLGYSEEFQRYTVKKALDDKKDQSYVLYGFTQDQIAHTLMPLAD 177

Query: 175 LKKYETWKLAQDIGGQDLVN 194
             K +   +A+++G      
Sbjct: 178 YTKDQVRGIAKEMGLPTYSK 197


>gi|85712895|ref|ZP_01043936.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Idiomarina baltica OS145]
 gi|85693275|gb|EAQ31232.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Idiomarina baltica OS145]
          Length = 376

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 56/195 (28%), Gaps = 11/195 (5%)

Query: 1   MNDIIKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           M +  K       ++  SGG DSS      L +  +VE L        + + +   C   
Sbjct: 1   MTESKKNPSETKVIVGMSGGVDSSVSAYLLLQQGYQVEGLFMKNW---EEDDDDEYCAAA 57

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
             +       + LG + +  +    +   +     +             +  + I F  F
Sbjct: 58  DDLADAEAVCEKLGIE-LHTVNFAAEYWDNVFEHFLDEYKAGRTPNPDIMCNKEIKFKAF 116

Query: 119 AATLAYRLGITNIVIGVCETDYSGYP-----DCRHDTIRAIETAINLGMESHVTVHTPLM 173
               A  LG   I  G                   +          L  E       P+ 
Sbjct: 117 LEFAAEALGADYIATGHYVRRAFNDGKWQLLRGLDNNKDQSYFLYTLSHEHVAQTLFPVG 176

Query: 174 WLKKYETWKLAQDIG 188
            L+K E  ++A++ G
Sbjct: 177 ELEKPEVRRIAEEQG 191


>gi|310827792|ref|YP_003960149.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Eubacterium limosum KIST612]
 gi|308739526|gb|ADO37186.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Eubacterium limosum KIST612]
          Length = 343

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
          K    ++ FSGG DS+  +    ++   V  ++FD+    +  LE    + K+I      
Sbjct: 2  KNKKVIVGFSGGADSAAAVLILKNKGYEVLGVTFDFFGN-EPLLEKASVLAKQIGIQHEC 60

Query: 67 WKDSLGEDHILPLAILGDI 85
                    +    + + 
Sbjct: 61 INRQREFREKVIKPFISEY 79


>gi|152990743|ref|YP_001356465.1| argininosuccinate synthase [Nitratiruptor sp. SB155-2]
 gi|166220999|sp|A6Q3P9|ASSY_NITSB RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|151422604|dbj|BAF70108.1| argininosuccinate synthase [Nitratiruptor sp. SB155-2]
          Length = 405

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 52/159 (32%), Gaps = 5/159 (3%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + KK    +L +SGG D+S  L W  + +   V T + D GQ  +VE   R    K  ++
Sbjct: 1   MTKKVNKVVLAYSGGLDTSVILKWLQETYNCEVVTFTADIGQGEEVEP-AREKALKLGIK 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
               + + L E+ +            +        +   ++    +  R I         
Sbjct: 60  PENIFIEDLKEEFVRDYVF---PMFRANAIYEGEYLLGTSIARPLIAKRQIEIARQVGAD 116

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
           A   G T         + +        T+ A     +L 
Sbjct: 117 AVAHGATGKGNDQVRFEIAYLSLNPDITVIAPWREWDLN 155


>gi|149175320|ref|ZP_01853942.1| GMP synthase [Planctomyces maris DSM 8797]
 gi|148845929|gb|EDL60270.1| GMP synthase [Planctomyces maris DSM 8797]
          Length = 532

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 53/188 (28%), Gaps = 17/188 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS   +        ++  +  D G   K E      V  +  E     
Sbjct: 235 KQVICGLSGGVDSSVVAALLYRAIGSQLSCIFVDNGLLRKGE---ADEVEHRFGEHFK-- 289

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                + H++    L     S L      + +   +   F+                  G
Sbjct: 290 ----TDLHVVDARDL---FLSELAGVTDPQEKRKIIGRLFIEVFQKEAASIENAKFLAQG 342

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                      +    PD    TI++      L  +    +  PL  L K E  ++  ++
Sbjct: 343 TLY----PDVIESGANPDGPAATIKSHHNVGGLPEKLGFELIEPLRELFKDEVRQMGHEL 398

Query: 188 GGQDLVNL 195
           G  D +  
Sbjct: 399 GLPDELIY 406


>gi|291533382|emb|CBL06495.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain or B
           subunit [Megamonas hypermegale ART12/1]
          Length = 340

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 59/187 (31%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS            ++  +  D+G   K E +    + +K  ++    
Sbjct: 110 KKVLCALSGGVDSSVAAVLVHKAVGKQLTCVFVDHGLLRKDEGDQVETIFRKQFDMNLIR 169

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D+           LG ++  S  +     I +               +      A +LG
Sbjct: 170 VDAKDR-------FLGKLAGVSDPERKRKIIGEEF-------------IRVFEAEANKLG 209

Query: 128 -ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  +V G    D          TI++      L  +    +  PL  L K E   + ++
Sbjct: 210 KIDFLVQGTIYPDIVESGTKTSATIKSHHNVGGLPEDIQFDLIEPLRELFKDEVRAVGEE 269

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 270 LGIPHDL 276


>gi|254429373|ref|ZP_05043080.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Alcanivorax sp. DG881]
 gi|196195542|gb|EDX90501.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Alcanivorax sp. DG881]
          Length = 364

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 59/191 (30%), Gaps = 12/191 (6%)

Query: 5   IKKAPS---ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           ++KAP     ++  SGG DSS   +  +D   +VE L       +     C    R+ ++
Sbjct: 1   MRKAPKDTRVIVGMSGGVDSSVAAARLIDAGYQVEGLFMKNWNEDDGTDYC--TAREDLL 58

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           + M        E H    A   +     +  +   + +    PN  +     I       
Sbjct: 59  DAMQVAGVLGIELHT---ANFAEQYWDRVFAHFLAEYKAGRTPNPDILCNKEIKFQAFLD 115

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM----WLKK 177
            A  LG   I  G       G        +   +                 +     L+K
Sbjct: 116 HAITLGADYIATGHYSQVSHGDKAQLLRAVDTNKDQTYFLHAVDYQKFDRTLFPLGDLEK 175

Query: 178 YETWKLAQDIG 188
            E  ++A++ G
Sbjct: 176 PEVRRIAEEKG 186


>gi|224476719|ref|YP_002634325.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|254811461|sp|B9DNH6|MNMA_STACT RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|222421326|emb|CAL28140.1| putative (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus carnosus subsp. carnosus TM300]
          Length = 370

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 50/189 (26%), Gaps = 11/189 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  +    ++  SGG DSS       ++   V  +             C     +   ++
Sbjct: 1   MSNQDTRVVVGMSGGVDSSVTAYLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDYNDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +          + +            +      + +    PN  V     I        A
Sbjct: 59  IAVCNQIGIPYYAVN---FEQEYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLDHA 115

Query: 124 YRLGITNIVIGVCETDYSGYP----DCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKK 177
            +LG   +  G                R       +T     L  E    V  PL  ++K
Sbjct: 116 MKLGADYVATGHYAQVRRDADGNVEMLRGVDNNKDQTYFLNQLTHEQLSKVMFPLGGMEK 175

Query: 178 YETWKLAQD 186
            E  ++A +
Sbjct: 176 SEVRRIAAE 184


>gi|227524073|ref|ZP_03954122.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus hilgardii ATCC 8290]
 gi|227088812|gb|EEI24124.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus hilgardii ATCC 8290]
          Length = 374

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 45/194 (23%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS        +   V  +             C     +  
Sbjct: 1   MQD--NSQTRVVVGMSGGVDSSVVAYLLKQQGYDVIGVFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            +      + +    P+  V     I      
Sbjct: 57  KDVAKVANKIGIPYYSVN---FEKEYWDRVFTYFLDEYKKGRTPDPDVICNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A  LG   I  G             H    +            L       V  P+  
Sbjct: 114 DYALELGADYIATGHYAQLTRDEDGHNHLLRASDGNKDQTYFLSQLSANQLDRVMFPIGN 173

Query: 175 LKKYETWKLAQDIG 188
           L K E  ++A+  G
Sbjct: 174 LVKPEVREIARKAG 187


>gi|227512195|ref|ZP_03942244.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus buchneri ATCC 11577]
 gi|227084589|gb|EEI19901.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus buchneri ATCC 11577]
          Length = 374

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 45/194 (23%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS        +   V  +             C     +  
Sbjct: 1   MQD--NSQTRVVVGMSGGVDSSVVAYLLKQQGYDVIGVFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            +      + +    P+  V     I      
Sbjct: 57  KDVAKVANKIGIPYYSVN---FEKEYWDRVFTYFLDEYKKGRTPDPDVICNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A  LG   I  G             H    +            L       V  P+  
Sbjct: 114 DYALELGADYIATGHYAQLTRDEDGHNHLLRASDGNKDQTYFLSQLSANQLDRVMFPIGN 173

Query: 175 LKKYETWKLAQDIG 188
           L K E  ++A+  G
Sbjct: 174 LVKPEVREIARKAG 187


>gi|319760524|ref|YP_004124462.1| tRNA-specific 2-thiouridylase mnmA [Candidatus Blochmannia vafer
           str. BVAF]
 gi|318039238|gb|ADV33788.1| tRNA-specific 2-thiouridylase mnmA [Candidatus Blochmannia vafer
           str. BVAF]
          Length = 366

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 50/184 (27%), Gaps = 9/184 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS        R  +VE L     + +  +  C       +++      
Sbjct: 2   KKVIVGISGGVDSSVSAWLLKKRGYKVEGLFMKNWENDDTQEFCASK--SDLIDACSVCN 59

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 H +  +   +  ++     + +           +  + I F  F       LG 
Sbjct: 60  TLKIPLHTVNFS--REYWNNVFKVFLKLYNIGLTPNPDILCNKEIKFKYFLEFAIEDLGA 117

Query: 129 TNIVIGVCETDYSGYPD---CRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYETWKL 183
             I  G      +        R   +   ++     +      H         K +   +
Sbjct: 118 DFIATGHYVRRINFNNKISLIRGIDLNKDQSYFLYTLNQQQLKHCLFPIGNFTKLKVRSI 177

Query: 184 AQDI 187
           A+ +
Sbjct: 178 AKKL 181


>gi|306835899|ref|ZP_07468893.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Corynebacterium accolens ATCC 49726]
 gi|304568224|gb|EFM43795.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Corynebacterium accolens ATCC 49726]
          Length = 361

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 47/182 (25%), Gaps = 5/182 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK-KIVELMPKWK 68
             L+  SGG DSS   + A++    V  +     +  +   E        +      +  
Sbjct: 2   RVLVAMSGGVDSSVAAARAVEAGHDVVGVHLALHKDAQQTREKARGCCSLEDSADARRIC 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D LG    +      +     +  +          PN  +     I           LG 
Sbjct: 62  DKLGIPFYVW--DFSEEFKEEVITDFVDSYSRGETPNPCLRCNEKIKFRALLQKGMALGF 119

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYETWKLAQD 186
             +  G   T        R       ++ +   + +    H         K +  + A  
Sbjct: 120 DAVATGHYATLDDDGYMRRSKDENKDQSYVLGVISAEELDHCFFPIGDTPKPQIREEAAA 179

Query: 187 IG 188
            G
Sbjct: 180 HG 181


>gi|323495112|ref|ZP_08100199.1| tRNA s(4)U8 sulfurtransferase [Vibrio brasiliensis LMG 20546]
 gi|323310663|gb|EGA63840.1| tRNA s(4)U8 sulfurtransferase [Vibrio brasiliensis LMG 20546]
          Length = 482

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  +V    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGP-------AHEI--GVKQVSHYLWNK 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G       +       S   + V  +I +             +F+  A  +A +  I  
Sbjct: 231 YG-------SSAKVRFISVDFEPVVAEILEKVDDGQMGVILKRMFMRAAGMVAEKFKIEA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K +   LA+DIG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIINLARDIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|261252278|ref|ZP_05944851.1| thiamine biosynthesis protein ThiI [Vibrio orientalis CIP 102891]
 gi|260935669|gb|EEX91658.1| thiamine biosynthesis protein ThiI [Vibrio orientalis CIP 102891]
          Length = 482

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  +V    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGP-------AHEI--GVKQVSHYLWNK 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G       +       S   + V  +I +             +F+  A  +A +  I  
Sbjct: 231 YG-------SSAKVRFISVDFEPVVAEILEKVDDGQMGVILKRMFMRAAGMVAEKFKIEA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K +   LA+DIG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIINLARDIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|255526450|ref|ZP_05393361.1| GMP synthase, large subunit [Clostridium carboxidivorans P7]
 gi|296184824|ref|ZP_06853235.1| GMP synthase (glutamine-hydrolyzing) [Clostridium carboxidivorans
           P7]
 gi|255509832|gb|EET86161.1| GMP synthase, large subunit [Clostridium carboxidivorans P7]
 gi|296050606|gb|EFG90029.1| GMP synthase (glutamine-hydrolyzing) [Clostridium carboxidivorans
           P7]
          Length = 510

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 60/187 (32%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS            ++  +  D+G   K E +    + KK      ++
Sbjct: 216 KKVICALSGGVDSSVAAVLVHRAIGKQLTCIFVDHGLLRKDEGDQVETIFKK------QF 269

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +L   +     +      S   +   +  ++              F+      A +LG
Sbjct: 270 DMNLIRVNAKDRFLGKLAGVSDPERKRKIIGEE--------------FIRVFEEEANKLG 315

Query: 128 -ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I+ +V G    D          TI++      L  +    +  PL  L K E   + ++
Sbjct: 316 EISFLVQGTIYPDVVESGTNTSATIKSHHNVGGLPEDMQFKLIEPLRELFKDEVRAVGEE 375

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 376 LGIPHKL 382


>gi|224373011|ref|YP_002607383.1| GMP synthase [Nautilia profundicola AmH]
 gi|223588494|gb|ACM92230.1| GMP synthase (glutamine-hydrolyzing) [Nautilia profundicola AmH]
          Length = 511

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 53/186 (28%), Gaps = 18/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS   +   +   D++  +  D G   K E E      K +       
Sbjct: 215 NKVICALSGGVDSSVTAALLHEAIGDKLVPIFVDTGLLRKNEREQVEHAFKNV------- 267

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    L      +   S L   V  + +   + +TF+   +              G
Sbjct: 268 -----LHVPLITVDAREKFLSKLKGVVDPEEKRKIIGHTFIEVFDEEAKKHKDAKFLAQG 322

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    +   S        TI++      L       +  PL  L K E  KL  ++
Sbjct: 323 -----TLYPDVIESVSVKGPSKTIKSHHNVGGLPDWMQFELIEPLRELFKDEVRKLGIEL 377

Query: 188 GGQDLV 193
           G    +
Sbjct: 378 GLPSEL 383


>gi|218439179|ref|YP_002377508.1| tRNA-specific 2-thiouridylase MnmA [Cyanothece sp. PCC 7424]
 gi|226704768|sp|B7KHE5|MNMA_CYAP7 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|218171907|gb|ACK70640.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Cyanothece sp. PCC 7424]
          Length = 349

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 56/187 (29%), Gaps = 15/187 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSST  +    +   V  L+        +      C  + +V+     +
Sbjct: 2   NRVVVGLSGGVDSSTAAASLHHQGYDVVGLTL------WLMKGKGQCCSEGMVDAAFICE 55

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 HI+    + + +       V+               R + F          LGI
Sbjct: 56  QLGIPHHIVDSRDVFEKNIIDYL--VSGYEVGITPLPCSQCNRAVKFGPMLNYARQELGI 113

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH-------TPLMWLKKYETW 181
             I  G            R+  +RA++   +     +            PL    K ET 
Sbjct: 114 DRIATGHYARIGYDEVSGRYQLLRAVDRNKDQSYFLYDLTQDLLAATLFPLGNQTKEETR 173

Query: 182 KLAQDIG 188
           ++A + G
Sbjct: 174 RIAHEFG 180


>gi|58616792|ref|YP_195991.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Ehrlichia ruminantium str. Gardel]
 gi|75356565|sp|Q5FF75|GUAA_EHRRG RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|58416404|emb|CAI27517.1| GMP synthase [glutamine-hydrolyzing] [Ehrlichia ruminantium str.
           Gardel]
          Length = 528

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 58/182 (31%), Gaps = 15/182 (8%)

Query: 8   APSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS   +       D++  +  D G     E+E      K++     K
Sbjct: 219 NKKVIAALSGGVDSSVAAALTYKAIGDQLHCVFIDNGLLRYNEVEK----VKQLFINELK 274

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              ++ +   + L  L  I+     + +  +               + FL+         
Sbjct: 275 IPVTIVDKSAVFLNRLKSITDPERKRKIIGETFIEIFEEEANKLEGVEFLMQG------- 327

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+  SG        I++      L       +  PL +L K E   L ++
Sbjct: 328 ---TIYPDVVESGGSGSIAKESVVIKSHHNVGGLPKTMKFKLVEPLKYLFKDEVRILGRN 384

Query: 187 IG 188
           +G
Sbjct: 385 LG 386


>gi|262306053|gb|ACY45619.1| gln amidotransferase [Heterometrus spinifer]
          Length = 196

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 25/65 (38%), Gaps = 2/65 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               L+L SGG DS+ C +      + D+V  +  D G   K E        +K+   + 
Sbjct: 43  NNRVLMLVSGGVDSTVCAALLHKALKEDQVIAIHIDNGFMRKNESRQVEQSLRKLGLKLQ 102

Query: 66  KWKDS 70
               S
Sbjct: 103 VVNAS 107


>gi|238882936|gb|EEQ46574.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 483

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 46/181 (25%), Gaps = 5/181 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                  +  SGG DS             +  ++ D+  R +   E      +     + 
Sbjct: 19  NAPKKVAVALSGGPDSMLLTWLLSQCKFEIYAITIDHKYRPEASREALSVYERVKNWNLN 78

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
               SL     +    L +    +  K      Q     +  V            T   R
Sbjct: 79  HIIKSLDYPAGVDPTKLNNFEEIAREKRYEAMAQVCYDKDIPVLFLGHHRDDQLETFIQR 138

Query: 126 L-GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           L G ++I         S  P  +  +  +          + V +  P     K +  +  
Sbjct: 139 LQGNSSIFGLAGTHKVSPLPISKDLSPTST----FFNQANQVRILRPFWDYDKQDILETC 194

Query: 185 Q 185
           Q
Sbjct: 195 Q 195


>gi|57238805|ref|YP_179941.1| GMP synthase [Ehrlichia ruminantium str. Welgevonden]
 gi|58578732|ref|YP_196944.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Ehrlichia ruminantium str. Welgevonden]
 gi|81353082|sp|Q5HCA2|GUAA_EHRRW RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|57160884|emb|CAH57786.1| GMP synthase [glutamine-hydrolyzing] [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58417358|emb|CAI26562.1| GMP synthase [glutamine-hydrolyzing] [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 528

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 58/182 (31%), Gaps = 15/182 (8%)

Query: 8   APSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS   +       D++  +  D G     E+E      K++     K
Sbjct: 219 NKKVIAALSGGVDSSVAAALTYKAIGDQLHCVFIDNGLLRYNEVEK----VKQLFINELK 274

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              ++ +   + L  L  I+     + +  +               + FL+         
Sbjct: 275 IPVTIVDKSAVFLNRLKSITDPERKRKIIGETFIEIFEEEANKLEGVEFLMQG------- 327

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+  SG        I++      L       +  PL +L K E   L ++
Sbjct: 328 ---TIYPDVVESGGSGSIAKESVVIKSHHNVGGLPKTMKFKLVEPLKYLFKDEVRILGRN 384

Query: 187 IG 188
           +G
Sbjct: 385 LG 386


>gi|37522184|ref|NP_925561.1| GMP synthase [Gloeobacter violaceus PCC 7421]
 gi|44887933|sp|Q7NHC2|GUAA_GLOVI RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|35213184|dbj|BAC90556.1| GMP synthetase [Gloeobacter violaceus PCC 7421]
          Length = 551

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 53/186 (28%), Gaps = 11/186 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST          D +  +  D G   K E E    + K   E     
Sbjct: 248 KRVLLALSGGVDSSTLAFLLHRAIGDNLTCMFIDQGFMRKNEPE---RLVKLFKEQFHIP 304

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       + + G         +   K +        V       L     LA    
Sbjct: 305 VAYVDAAERFIVRLEG-------VSDPEQKRKIIGAEFIRVFESESQRLGPFDYLAQGTL 357

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +I+    E       +     I++      L       +  PL  L K E  ++ + +
Sbjct: 358 YPDIIESAGENIDPKTGERVAVKIKSHHNVGGLPENLRFKLVEPLKRLFKDEVRQVGRAL 417

Query: 188 GGQDLV 193
           G  + +
Sbjct: 418 GLPEEI 423


>gi|281415680|ref|ZP_06247422.1| GMP synthase (glutamine-hydrolyzing) [Micrococcus luteus NCTC 2665]
          Length = 539

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 56/186 (30%), Gaps = 8/186 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             A+   SGG DS+   +       DR+  +  D+G   + E      + +   E     
Sbjct: 232 KRAICGLSGGVDSAVAAALVQRAIGDRLTCVYVDHGLMREGE---SAEIEQAFGEAHGGA 288

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +  + +     L+ L  ++     + +     +  +        +I+        A  + 
Sbjct: 289 RLVMVDAREDFLSALAGVTDPEAKRKIIG---ERFIRTFEKAQADIVLESEHDPDATEVR 345

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   +               I+       L  +    +  PL  L K E   +  ++
Sbjct: 346 -FLVQGTLYPDVVESGGGDGAANIKRHGNVGGLPDDIEFELCEPLRELFKDEVRAVGAEL 404

Query: 188 GGQDLV 193
           G  + +
Sbjct: 405 GLPEGI 410


>gi|87301596|ref|ZP_01084436.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Synechococcus sp. WH 5701]
 gi|87283813|gb|EAQ75767.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Synechococcus sp. WH 5701]
          Length = 532

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 50/190 (26%), Gaps = 19/190 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST          D++  +  D G   K E E                
Sbjct: 229 KRVLLALSGGVDSSTLAFLLHRAIGDQLTCMFIDQGFMRKGEPEF--------------L 274

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +       + +  +          +     +           R              L 
Sbjct: 275 TEFFDAQFHIRVEYINARDRFLAKLDGVTDPEQKRKIIGAEFIRVFEEESKRLGPFDYLA 334

Query: 128 ITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              +   V E+  +       +     I++      L  +    +  PL  L K E  K+
Sbjct: 335 QGTLYPDVIESAGTNLDPKTGERVAVKIKSHHNVGGLPKDLQFKLVEPLRRLFKDEVRKV 394

Query: 184 AQDIGGQDLV 193
            + +G  + +
Sbjct: 395 GRSLGLPEEI 404


>gi|254416610|ref|ZP_05030361.1| GMP synthase, C-terminal domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196176576|gb|EDX71589.1| GMP synthase, C-terminal domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 542

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 55/186 (29%), Gaps = 11/186 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST          D++  +  D G   K+E E    + K   +     
Sbjct: 239 KRVLLALSGGVDSSTLAFLLHKAIGDQLTCMFIDQGFMRKLEPE---RLVKLFQDEFHIP 295

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            + +         + G         +   K +        V       L     LA    
Sbjct: 296 VEYVNARDRFLARLEG-------VTDPEEKRRRIGHEFIRVFEEQSKILGPFDYLAQGTL 348

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +++            +     I++      L  +    +  PL  L K E  K+ + I
Sbjct: 349 YPDVIESADTNVDPKTGERVAVKIKSHHNVGGLPKDLRFKLVEPLRKLFKDEVRKVGRSI 408

Query: 188 GGQDLV 193
           G  + +
Sbjct: 409 GLPEAI 414


>gi|90579840|ref|ZP_01235648.1| thiamine biosynthesis protein ThiI [Vibrio angustum S14]
 gi|90438725|gb|EAS63908.1| thiamine biosynthesis protein ThiI [Vibrio angustum S14]
          Length = 483

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 58/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  +V    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGP-------AHEI--GVKQVAHYIWNK 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G    +    +         + V  +I +             +F+  A  +A + GI  
Sbjct: 231 FGSSAKVKFIAI-------DFEPVVGEILEKVDDGQMGVILKRMFMRAAGKVADKFGIEA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +  ++         +  PL+   K +   +A++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRHIDGVTDSL---------ILRPLINWDKEDIINVAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|300726991|ref|ZP_07060411.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella bryantii B14]
 gi|299775714|gb|EFI72304.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella bryantii B14]
          Length = 361

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/183 (11%), Positives = 44/183 (24%), Gaps = 7/183 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K     +L SGG DSS  +          +      G   + E +C     + +      
Sbjct: 8   KDKKIAVLLSGGVDSSVVVYEFASHGLHPDCFYIKIGPEEQEEWDCSSE--EDLEMATAV 65

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 +  ++      +  +      +             +  R I F  F   + +  
Sbjct: 66  AARFGCKLQVID--CHKEYWNQVTKYTMDKVKSGFTPNPDVMCNRLIKFGAFDEKMGHDY 123

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKL 183
            +             G            +    L       +     P+    K E  ++
Sbjct: 124 DLIATGHYAQTEIIDGKKWLVTSPDPVKDQTDFLAQIYQWQLKKAIFPIGHHIKDEIREI 183

Query: 184 AQD 186
           A+ 
Sbjct: 184 AER 186


>gi|298480213|ref|ZP_06998411.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides sp. D22]
 gi|298273494|gb|EFI15057.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides sp. D22]
          Length = 361

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/192 (8%), Positives = 48/192 (25%), Gaps = 11/192 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + ++    L+  SGG DS+       ++   +  ++         E +    + +++   
Sbjct: 1   MEERNKRVLVGMSGGIDSTATCLMLQEQGYEIVGVTMRVWGD---EPQDARELAERMGIE 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                + +     +    + +                  + N     R +         A
Sbjct: 58  HYVADERIPFKETIVKNFIDEYKQGRTPNP-------CVMCNPLFKFRVLTEWADKLNCA 110

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           +        +     +            ++      LG +       PL    K +  + 
Sbjct: 111 WVATGHYSRLEEKNGNIYIVAGDDDKKDQSYF-LWRLGQDVLKRCIFPLGDYTKVKVREY 169

Query: 184 AQDIGGQDLVNL 195
             + G +     
Sbjct: 170 LAEKGYETKSKE 181


>gi|171778579|ref|ZP_02919706.1| hypothetical protein STRINF_00558 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282802|gb|EDT48226.1| hypothetical protein STRINF_00558 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 406

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 49/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 34  MTD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDY 89

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 90  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 146

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A  LG   +  G             H    A            L  E    V  PL  
Sbjct: 147 DYAMTLGADYVATGHYAQVSRDEDGTVHMLRGADNNKDQTYFLSQLSQEQLEKVMFPLGH 206

Query: 175 LKKYETWKLAQDIG 188
           LKK E  K+A+  G
Sbjct: 207 LKKPEVRKIAERAG 220


>gi|153809107|ref|ZP_01961775.1| hypothetical protein BACCAC_03417 [Bacteroides caccae ATCC 43185]
 gi|149128440|gb|EDM19659.1| hypothetical protein BACCAC_03417 [Bacteroides caccae ATCC 43185]
          Length = 361

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/192 (9%), Positives = 47/192 (24%), Gaps = 11/192 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + ++    L+  SGG DS+       +R   +  ++         E +    +  ++   
Sbjct: 1   MKERNKRVLVGMSGGIDSTATCLMLQERGYEIVGVTMRVWGD---EPQDARELAAQMGIE 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                + +     +    + +                  + N     R +         A
Sbjct: 58  HYVADERIPFKETIVKNFIDEYKQGRTPNP-------CVMCNPLFKFRVLTEWADKLGCA 110

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           +        +     D            ++      LG +       PL    K +  + 
Sbjct: 111 WVATGHYSRLEERNGDIYIVAGDDDKKDQSYF-LWQLGQDVLRRCIFPLGDYTKVKVREY 169

Query: 184 AQDIGGQDLVNL 195
             D G +     
Sbjct: 170 LADKGYEAKSKE 181


>gi|258510943|ref|YP_003184377.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Alicyclobacillus acidocaldarius subsp. acidocaldarius
           DSM 446]
 gi|257477669|gb|ACV57988.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Alicyclobacillus acidocaldarius subsp. acidocaldarius
           DSM 446]
          Length = 365

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 46/188 (24%), Gaps = 11/188 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            A   ++  SGG DSS            V  +        + +        +   ++   
Sbjct: 1   MATRVVVGMSGGVDSSVTALLLKQAGYDVIGVFMKNWD--ETDENGACTAEQDFEDVRRV 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +      + +            + ++   + +    PN  V     I        A  L
Sbjct: 59  CEQIGIPYYGVN---FEREYEERVFQHFLEEFKRGRTPNPDVLCNREIKFKELLACALDL 115

Query: 127 GITNIVIGVCETDYSGYP------DCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           G   +  G                  R            L          P+  L K E 
Sbjct: 116 GADYLATGHYAQVRKDEDGTVALLRGRDKNKDQTYFLHMLTQAPLRRAMFPIGHLTKPEV 175

Query: 181 WKLAQDIG 188
            ++A+D G
Sbjct: 176 RQIARDHG 183


>gi|224538050|ref|ZP_03678589.1| hypothetical protein BACCELL_02940 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520340|gb|EEF89445.1| hypothetical protein BACCELL_02940 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 435

 Score = 52.6 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 51/182 (28%), Gaps = 20/182 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +  L    + +  +  ++G   K E E        +     + K
Sbjct: 142 KVLLALSGGVDSSVVAALLLKAIGNNLVCVHVNHGLMRKGESE------DVVEMFGNQLK 195

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +L    +     L  +      +     I    +       R +             GI
Sbjct: 196 ANLIYVDVTD-RFLTKLEGVEDPEQKRKIIGGEFIRVFEEEARKLD------------GI 242

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G    D           +++      L  +    +  PL  L K E      ++G
Sbjct: 243 DFLGQGTIYPDIVESGTKTAKMVKSHHNVGGLPEDLQFELVEPLRQLFKDEVRACGLELG 302

Query: 189 GQ 190
             
Sbjct: 303 LP 304


>gi|325294272|ref|YP_004280786.1| GMP synthase (glutamine-hydrolyzing) [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325064720|gb|ADY72727.1| GMP synthase (glutamine-hydrolyzing) [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 517

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 54/187 (28%), Gaps = 17/187 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            + +   SGG DSS   +       D++  +  D G   K E E    V K   E     
Sbjct: 220 KNVICALSGGVDSSVVAALLHKAIGDQLYPIFVDTGLLRKGERES---VEKTFREKFQMK 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                +   L L  L  ++     + +                 N  FL         + 
Sbjct: 277 NFRTVDASSLFLERLKGVTDPEKKRKIIGHTFIEVFEKAAKEIPNAHFLAQGTLYPDVIE 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                        S        TI++      L    +  +  PL  L K E  +L +++
Sbjct: 337 -------------SVSVKGPSATIKSHHNVGGLPERLNFKLIEPLRELFKDEVRELGKEL 383

Query: 188 GGQDLVN 194
           G  + + 
Sbjct: 384 GLPEEII 390


>gi|160883140|ref|ZP_02064143.1| hypothetical protein BACOVA_01109 [Bacteroides ovatus ATCC 8483]
 gi|299148187|ref|ZP_07041249.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides sp. 3_1_23]
 gi|156111365|gb|EDO13110.1| hypothetical protein BACOVA_01109 [Bacteroides ovatus ATCC 8483]
 gi|298512948|gb|EFI36835.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides sp. 3_1_23]
          Length = 361

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/192 (8%), Positives = 48/192 (25%), Gaps = 11/192 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + ++    L+  SGG DS+       ++   +  ++         E +    + +++   
Sbjct: 1   MEERNKRVLVGMSGGIDSTATCLMLQEQGYEIVGVTMRVWGD---EPQDARELAERMGIE 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                + +     +    + +                  + N     R +         A
Sbjct: 58  HYVADERIPFKETIVKNFIDEYKQGRTPNP-------CVMCNPLFKFRVLTEWADKLNCA 110

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           +        +     +            ++      LG +       PL    K +  + 
Sbjct: 111 WVATGHYSRLEEKSGNIYIVAGDDDKKDQSYF-LWRLGQDVLKRCIFPLGDYTKVKVREY 169

Query: 184 AQDIGGQDLVNL 195
             + G +     
Sbjct: 170 LAEKGYEAKSKE 181


>gi|298488737|ref|ZP_07006766.1| Argininosuccinate synthase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298156810|gb|EFH97901.1| Argininosuccinate synthase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 405

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 59/205 (28%), Gaps = 13/205 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MADVNKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +         + T      +   ++    +  R I         A
Sbjct: 61  ------YIDDLREEFVRYFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN------LGMESHVTVHTPLMWLKK 177
              G T         +   Y       + A     +      L   +           KK
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHNIPIERHGKK 174

Query: 178 YETWKLAQDIGGQDLVNLILEESHT 202
              + +  ++        +LE++ T
Sbjct: 175 KSPYSMDANLLHISYEGGVLEDTWT 199


>gi|227500390|ref|ZP_03930452.1| argininosuccinate synthase [Anaerococcus tetradius ATCC 35098]
 gi|227217453|gb|EEI82772.1| argininosuccinate synthase [Anaerococcus tetradius ATCC 35098]
          Length = 407

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQ 44
          +IIK+A   +L +SGG D+S   +W  +     V  +S D GQ
Sbjct: 5  EIIKEAKKVILAYSGGLDTSVLTTWLKENGAKEVICVSVDLGQ 47


>gi|195155452|ref|XP_002018618.1| GL25858 [Drosophila persimilis]
 gi|198476816|ref|XP_001357491.2| GA21637 [Drosophila pseudoobscura pseudoobscura]
 gi|194114771|gb|EDW36814.1| GL25858 [Drosophila persimilis]
 gi|198137863|gb|EAL34561.2| GA21637 [Drosophila pseudoobscura pseudoobscura]
          Length = 666

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 57/194 (29%), Gaps = 8/194 (4%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIV-ELM 64
           +   LLL SGG DSS C +         ++  +  D G   K E E      ++I  +L+
Sbjct: 228 SNKVLLLVSGGVDSSVCAALLRRALYPNQIIAVHVDNGFMRKNESEKVERSLREIGIDLI 287

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP---NTFVPGRNIIFLVFAAT 121
            + +          +   G  S             +       + FV   N +       
Sbjct: 288 VRKECYTFLKGTTQVKRPGQYSVVETPMLCQTYNPEEKRKIIGDIFVKVTNDVVAFLKLK 347

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYE 179
               +     +        S       +TI+      +L  E      V  PL    K E
Sbjct: 348 PEEVMLAQGTLRPDLIESASNMVSTNAETIKTHHNDTDLIRELRNAGRVVEPLCDFHKDE 407

Query: 180 TWKLAQDIGGQDLV 193
              L  D+G    +
Sbjct: 408 VRDLGNDLGLPPEL 421


>gi|73748589|ref|YP_307828.1| tRNA-specific 2-thiouridylase MnmA [Dehalococcoides sp. CBDB1]
 gi|289432615|ref|YP_003462488.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Dehalococcoides sp. GT]
 gi|123619640|sp|Q3ZXD7|MNMA_DEHSC RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205814533|sp|A5FR85|MNMA_DEHSB RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|73660305|emb|CAI82912.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Dehalococcoides sp. CBDB1]
 gi|288946335|gb|ADC74032.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Dehalococcoides sp. GT]
          Length = 357

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 51/189 (26%), Gaps = 10/189 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +   +   ++  SGG DSS      L++   V  +S     ++  E        K I   
Sbjct: 1   MSDSSELVMVAMSGGVDSSVTAMLLLEQGYNVAGVSLQL--KSNNEPYGNGYNLKLINRA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      +++ L+ +      +   +   +      PN  +     + +       
Sbjct: 59  REVAAALNIPHYVVDLSDIFSQRVIA---DFCQQYSQGRTPNPCIRCNYYVKIGALLNKI 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
                  +  G      S                       L  ES   +  PL    K 
Sbjct: 116 QDFKADYLATGHYARIVSDENGTHLLRGADGKKDQSYFLYTLPPESLSRLMFPLGQKYKK 175

Query: 179 ETWKLAQDI 187
           +  +LA ++
Sbjct: 176 DIVRLATNM 184


>gi|325973163|ref|YP_004250227.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Mycoplasma suis str. Illinois]
 gi|323651765|gb|ADX97847.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Mycoplasma suis str. Illinois]
          Length = 369

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 21/66 (31%), Gaps = 2/66 (3%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--QRNKVELECRLCVRKKIVELMP 65
              ++  SGG DSS           +V  +       Q N++E++       K  E   
Sbjct: 6  EKKVVIALSGGVDSSVAALLLKKEGYKVFGIHMINWDSQLNELEMDKECESLSKDREYAE 65

Query: 66 KWKDSL 71
               L
Sbjct: 66 LIAQQL 71


>gi|224826536|ref|ZP_03699637.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lutiella nitroferrum 2002]
 gi|224601137|gb|EEG07319.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lutiella nitroferrum 2002]
          Length = 358

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/174 (12%), Positives = 47/174 (27%), Gaps = 10/174 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      ++  SGG DSS        +   V  +     + +  +  C   +++  ++ M
Sbjct: 1   MTGKKRIVVGMSGGVDSSVTAWLLKQQGHEVIGVFMQNWEDDNDDEYCS--IKQDALDAM 58

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                   +  ++            +      +      PN  V     I        A 
Sbjct: 59  SVADIVGIDMEVVN---FAKEYKDRVFSYFLKEYSAGRTPNPDVLCNAEIKFKAFLDYAM 115

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            LG   I      T +    + R      ++   +   +S+         L K 
Sbjct: 116 ELGADCI-----ATGHYARKEERDGKHYLLKAVDHTKDQSYFLYRLNQAQLSKA 164


>gi|270285349|ref|ZP_06194743.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia muridarum Nigg]
 gi|270289365|ref|ZP_06195667.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia muridarum Weiss]
 gi|301336746|ref|ZP_07224948.1| tRNA-specific 2-thiouridylase MnmA [Chlamydia muridarum MopnTet14]
 gi|14195289|sp|Q9PKA7|MNMA_CHLMU RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 358

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 50/185 (27%), Gaps = 7/185 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
              + ++  SGG DSS        +    V  L        + +        K  +++  
Sbjct: 1   MRKTVIVAMSGGVDSSVVAYLLKKQGKYDVIGLFMK--NWEEQDENGECTATKDFLDVEQ 58

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +      + +  +   +      ++ +             +  R I F +    +   
Sbjct: 59  IAEQLSIPYYTV--SFAKEYKERVFSRFLKEYTNGYTPNPDVLCNREIKFDLLQKKVREL 116

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYETWKL 183
            G        C     G    R       ++    G        V  PL  + K E  +L
Sbjct: 117 KGDFLATGHYCRGGLDGTGLFRGVDPNKDQSYFLCGTPKEALSNVLFPLGGMYKTEVRQL 176

Query: 184 AQDIG 188
           A + G
Sbjct: 177 AIEAG 181


>gi|262306035|gb|ACY45610.1| gln amidotransferase [Eurytemora affinis]
          Length = 191

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 8  APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKI 60
              +LL SGG DSS C +      R D++  L  D G   K E E  L   + +
Sbjct: 43 NKKVILLISGGVDSSVCAALLKKALRPDQIVALHIDNGFMRKKESEKVLESLQVL 97


>gi|227890864|ref|ZP_04008669.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus salivarius ATCC 11741]
 gi|227867273|gb|EEJ74694.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus salivarius ATCC 11741]
          Length = 375

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 52/194 (26%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D  K     ++  SGG DSS        +   V  +             C   V +  
Sbjct: 1   MKD--KSQIRVVVGMSGGVDSSVSAYLLKQQGYDVVGVFMKNWDDKNDSGVC--TVTEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            +      + +D   PN  +     +      
Sbjct: 57  QDVAKVASQIGIPYYSVN---FEKEYWDRVFTYFLDEYKDGRTPNPDIMCNKEVKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A  +    I +G             H    A +          L  E    V  P+  
Sbjct: 114 DYAMSIDADYIAMGHYAQLRRDEDGRVHLLRGADDNKDQTYFLSQLSQEQLQKVMFPIGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  ++A++ G
Sbjct: 174 LQKSEVRRIAEEAG 187


>gi|154251830|ref|YP_001412654.1| argininosuccinate synthase [Parvibaculum lavamentivorans DS-1]
 gi|171769581|sp|A7HSW4|ASSY_PARL1 RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|154155780|gb|ABS62997.1| Argininosuccinate synthase [Parvibaculum lavamentivorans DS-1]
          Length = 410

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 54/182 (29%), Gaps = 11/182 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKK 59
           M+   K     +L +SGG D+S  L W  +     V T + D GQ  ++E        + 
Sbjct: 1   MSGATKDVKKVVLAYSGGLDTSVILKWLQETYGCEVVTFTADLGQGEELEP--ARKKAEM 58

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +  +   + + L E+ +            +      + +   ++    +  R I      
Sbjct: 59  LG-VKEIYIEDLREEFVRDFVF---PMFRANAVYEGVYLLGTSIARPLIAKRQIEIARQT 114

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV----TVHTPLMWL 175
              A   G T         +           I A     +L   + +      H   +  
Sbjct: 115 GADAVCHGSTGKGNDQVRFELGYAALNPEIKIIAPWREWDLTSRTKLIEFAEKHQIPIAK 174

Query: 176 KK 177
            K
Sbjct: 175 DK 176


>gi|320547685|ref|ZP_08041970.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus equinus ATCC 9812]
 gi|320447760|gb|EFW88518.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus equinus ATCC 9812]
          Length = 373

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 50/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D  K     ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MTDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQVGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A  LG   +  G             H    A            L  E    V  PL  
Sbjct: 114 DYAMTLGADYVATGHYAQVSRDEDGTVHMLRGADNNKDQTYFLSQLSQEQLQKVMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  K+A+  G
Sbjct: 174 LEKPEVRKIAERAG 187


>gi|299535696|ref|ZP_07049017.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lysinibacillus fusiformis ZC1]
 gi|298728896|gb|EFI69450.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lysinibacillus fusiformis ZC1]
          Length = 374

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 45/185 (24%), Gaps = 11/185 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS        +   V  +             C     +   +++     
Sbjct: 11  RVVVGMSGGVDSSVAAYLLKQQGYEVIGIFMKNWDDTDENGVC--TATEDYDDVIKVCNQ 68

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                + +             T  +             +     I        A  LG  
Sbjct: 69  IGIPYYAVN--FEKQYWDKVFTYFLEEYKAGRTPNPDVMC-NKEIKFKAFLEHAMNLGAD 125

Query: 130 NIVIGVCETDYSGYP----DCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYETWKL 183
            +  G                R       +T     L  E    V  P+  ++K E  K+
Sbjct: 126 YLATGHYARIDRNGDGEVRMLRGVDDNKDQTYFLNQLSQEQLAHVMFPIGDIEKKEVRKI 185

Query: 184 AQDIG 188
           A++ G
Sbjct: 186 AEEAG 190


>gi|15790733|ref|NP_280557.1| GMP synthase subunit B [Halobacterium sp. NRC-1]
 gi|169236476|ref|YP_001689676.1| GMP synthase subunit B [Halobacterium salinarum R1]
 gi|13626903|sp|Q9HP33|GUAAB_HALSA RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
           AltName: Full=GMP synthetase
 gi|226738370|sp|B0R6G1|GUAAB_HALS3 RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
           AltName: Full=GMP synthetase
 gi|10581275|gb|AAG20037.1| GMP synthase subunit B [Halobacterium sp. NRC-1]
 gi|167727542|emb|CAP14330.1| GMP synthase (glutamine-hydrolyzing) subunit B [Halobacterium
           salinarum R1]
          Length = 305

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 63/187 (33%), Gaps = 28/187 (14%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            +A++  SGG DSST  + A +   D++  +  D G   K E            + + + 
Sbjct: 22  ETAIIALSGGVDSSTAAALAYEAVGDQLVPVYVDTGLMRKGET-----------DEIREV 70

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D +    ++  +       + +T     +                  +    T+A  + 
Sbjct: 71  FDYMDSLRVVDASDRFFDELAGVTDPEEKRHAIGEQF-----------IREFETVAEEVD 119

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-VHTPLMWLKKYETWKLAQD 186
            T +V                 TI++      L        +  P+  L K E  ++A+ 
Sbjct: 120 ATQLVQ----GTIYPDRIESEGTIKSHHNVGGLPERVGFEGIVEPMRDLYKDEVREVARH 175

Query: 187 IGGQDLV 193
           +G ++++
Sbjct: 176 LGLEEII 182


>gi|89073144|ref|ZP_01159683.1| thiamine biosynthesis protein ThiI [Photobacterium sp. SKA34]
 gi|89051097|gb|EAR56554.1| thiamine biosynthesis protein ThiI [Photobacterium sp. SKA34]
          Length = 483

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 57/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  +V    F+ G            +   + ++       
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGP-------AHEI--GVKQVAHYIWKK 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G    +    +         + V  +I +             +F+  A  +A + GI  
Sbjct: 231 FGSSAKVKFIAI-------DFEPVVGEILEKVDDGQMGVILKRMFMRAAGKVADKFGIEA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +  ++         +  PL+   K +   +A++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRHIDGVTDSL---------ILRPLINWDKEDIINVAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|94311890|ref|YP_585100.1| tRNA-specific 2-thiouridylase MnmA [Cupriavidus metallidurans CH34]
 gi|205816893|sp|Q1LJ45|MNMA_RALME RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|93355742|gb|ABF09831.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Cupriavidus metallidurans CH34]
          Length = 359

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 43/189 (22%), Gaps = 11/189 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS        +   V  L     + +     C         + +    
Sbjct: 4   KRVVVGLSGGVDSSVTAWLLKQQGYEVIGLFMKNWEDDDDSEYCSTRQ-----DWLDVAS 58

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +      +            +  +   +      PN  V     I        A  LG 
Sbjct: 59  VADVIGVDVEAVNFAAEYKDRVFADFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLGA 118

Query: 129 TNIVIGVCETDYSGYP------DCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
             I  G                     T         L          PL  + K    +
Sbjct: 119 NTIATGHYARVRQAANGKFELLKAFDHTKDQSYFLHRLNQAQLSRTLFPLGEIPKTRVRE 178

Query: 183 LAQDIGGQD 191
           +A +IG  +
Sbjct: 179 IAAEIGLPN 187


>gi|218245564|ref|YP_002370935.1| GMP synthase [Cyanothece sp. PCC 8801]
 gi|257058608|ref|YP_003136496.1| GMP synthase [Cyanothece sp. PCC 8802]
 gi|226738435|sp|B7JXM2|GUAA_CYAP8 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|218166042|gb|ACK64779.1| GMP synthase, large subunit [Cyanothece sp. PCC 8801]
 gi|256588774|gb|ACU99660.1| GMP synthase, large subunit [Cyanothece sp. PCC 8802]
          Length = 542

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 52/186 (27%), Gaps = 11/186 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST          D +  +  D G   K E E  + +  K        
Sbjct: 239 KRVLLALSGGVDSSTLAFLLHRAIGDNLTCMFIDQGFMRKGEPERLVEIFDK---QFHIP 295

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            + +             +   +   +   K +        V       L     LA    
Sbjct: 296 VEYVNARTRF-------LEQLAGVTDPETKRRLIGHEFIQVFEEESERLGPFDYLAQGTL 348

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +++            +     I++      L       +  PL  L K E  KL + I
Sbjct: 349 YPDVIESADTNVDPQTGERVAVKIKSHHNVGGLPKNLRFKLVEPLRKLFKDEVRKLGRAI 408

Query: 188 GGQDLV 193
           G  + +
Sbjct: 409 GLPEEI 414


>gi|225575528|ref|ZP_03784138.1| hypothetical protein RUMHYD_03620 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037254|gb|EEG47500.1| hypothetical protein RUMHYD_03620 [Blautia hydrogenotrophica DSM
           10507]
          Length = 512

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 50/190 (26%), Gaps = 22/190 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   L   SGG DSS           D++  +  D+G            +RK   + +  
Sbjct: 215 SGKVLCALSGGVDSSVAAVMMSKAVGDQLTCVFVDHG-----------LLRKNEGDEVEA 263

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G   +  + +          K V    +               F+      A ++
Sbjct: 264 VFGPQGPYKLNFIRVNAQQRFYDKLKGVEEPEKK-------RKIIGEEFIRVFEEEAKKI 316

Query: 127 GITNIV---IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           G  + +       +   SG                         +  PL  L K E  K 
Sbjct: 317 GAVDYLVQGTIYPDVVESGLGGESAVIKSHHNVGGLPECVDFKEIIEPLRDLFKDEVRKA 376

Query: 184 AQDIGGQDLV 193
             ++G  D +
Sbjct: 377 GLELGIPDYL 386


>gi|154149314|ref|YP_001407132.1| thiamine biosynthesis protein:ExsB [Campylobacter hominis ATCC
           BAA-381]
 gi|153805323|gb|ABS52330.1| thiamine biosynthesis protein:ExsB [Campylobacter hominis ATCC
           BAA-381]
          Length = 327

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 25/96 (26%), Gaps = 2/96 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL LFSGG DS        D    V  L  D G     + +    + ++       +  
Sbjct: 2   KALALFSGGLDSMLAAKIISDMGVEVTALHIDIGF--GSKDDKSEILARRAGVAGADFAI 59

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN 105
               +  L   +           N  +         
Sbjct: 60  IDVREEYLKNVLFSPKYGYGKHFNPCIDCHGFMFRT 95


>gi|154250437|ref|YP_001411262.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Fervidobacterium nodosum Rt17-B1]
 gi|205816865|sp|A7HNX2|MNMA_FERNB RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|154154373|gb|ABS61605.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Fervidobacterium nodosum Rt17-B1]
          Length = 348

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 27/87 (31%), Gaps = 15/87 (17%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY---------GQRNK-----VELEC 52
           +    +L SGG DS+  L   +++   V                  ++K      +   
Sbjct: 1  MSAKVGVLLSGGVDSAVALYLLIEKGYEVTAYHMKTVRDELYITKQIKHKVCCSPSDTHD 60

Query: 53 RLCVRKKIVELMPKWK-DSLGEDHILP 78
             + KK          + + ++ I+ 
Sbjct: 61 AQLIAKKFGVPFKIIHVEDVFKEKIID 87


>gi|260438131|ref|ZP_05791947.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Butyrivibrio crossotus DSM 2876]
 gi|292809456|gb|EFF68661.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Butyrivibrio crossotus DSM 2876]
          Length = 357

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/198 (12%), Positives = 51/198 (25%), Gaps = 10/198 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL--M 64
                ++  SGG DSS       ++   V  ++    Q               +  +   
Sbjct: 1   MKKKVVVGMSGGVDSSVAALILKEQGYDVIGVTMQIWQDEDYCDMSENGGCCGLSAVDDA 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            +  +++G  + +      +    ++      +      PN  +     +          
Sbjct: 61  RRVAETIGIPYYVM--NFKEEFKKTVIDYFVAEYLRGRTPNPCIACNRYVKWEALLHRCL 118

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMWLKKY 178
            +G   I  G               T  A           NL  E       P+  ++K 
Sbjct: 119 GIGADYIATGHYGNIEKLPNGRFAVTKSASLNKDQSYVLYNLTQEELSHTLFPISTMEKD 178

Query: 179 ETWKLAQDIGGQDLVNLI 196
           E  K+A+  G        
Sbjct: 179 EVRKIAERAGLPVAHKKD 196


>gi|169849981|ref|XP_001831689.1| argininosuccinate synthetase [Coprinopsis cinerea okayama7#130]
 gi|116507327|gb|EAU90222.1| argininosuccinate synthetase [Coprinopsis cinerea okayama7#130]
          Length = 425

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 2/58 (3%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          +      LL +SGG D+S  L+W +++   V     D GQ  + + E       K+  
Sbjct: 1  MTDKGRVLLAYSGGLDTSCILAWLIEQGYEVYAFMADVGQ--EEDFEAARDKALKVGA 56


>gi|20089138|ref|NP_615213.1| hypothetical protein MA0240 [Methanosarcina acetivorans C2A]
 gi|19914006|gb|AAM03693.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 281

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 11/100 (11%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
              IK   SA++ FSGG DSST  + A +   ++   ++ D     + +LE       +I
Sbjct: 10  RKAIKARESAVIAFSGGVDSSTLAALAFEELGEKALAVTIDSPLFPRQQLETAAQTACEI 69

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD 100
                       +  ILP ++      S+ T N     + 
Sbjct: 70  G----------IQHKILPFSLTSVPYFSANTINRCYFCKK 99


>gi|299065725|emb|CBJ36899.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ralstonia solanacearum CMR15]
          Length = 370

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 46/188 (24%), Gaps = 10/188 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS        +   V  L     + +     C     +  ++++    
Sbjct: 4   KRVVVGMSGGVDSSVTAWLLKQQGYEVIGLFMKNWEDDDDSEYCSTR--QDWIDVVSVAD 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               +   +            +  +   +      PN  V     I        A  LG 
Sbjct: 62  LIGVD---VEAVNFAAEYKDRVFADFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMALGA 118

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             I  G                    T         L          PL  + K    ++
Sbjct: 119 DTIATGHYARVREVDGRFELLKAFDHTKDQSYFLHRLNQAQLSRTLFPLSEMPKTRVREI 178

Query: 184 AQDIGGQD 191
           A +IG  +
Sbjct: 179 AAEIGLPN 186


>gi|255321785|ref|ZP_05362940.1| thiamine biosynthesis protein:ExsB [Campylobacter showae RM3277]
 gi|255301265|gb|EET80527.1| thiamine biosynthesis protein:ExsB [Campylobacter showae RM3277]
          Length = 328

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 36/122 (29%), Gaps = 15/122 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL+LFSGG DS   +     +   V  +  D G     + +    +R++  E       
Sbjct: 2   KALVLFSGGLDSMISIKLLTTQGIEVTAIHIDIGF--SGDEKKAEILRRRANEAGA---- 55

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E  I+ +          L + +                 +      A  +    G +
Sbjct: 56  ---EFKIVDIRN------EYLREVLFTPKHGYGKHFNPCIDCHGYMFKTALAMMSAEGAS 106

Query: 130 NI 131
            I
Sbjct: 107 FI 108


>gi|269217070|ref|ZP_06160924.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Slackia exigua ATCC 700122]
 gi|269129207|gb|EEZ60292.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Slackia exigua ATCC 700122]
          Length = 362

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/193 (11%), Positives = 45/193 (23%), Gaps = 14/193 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV------RKKI 60
                ++  SGG DSS        +   V   +      +    + R C          +
Sbjct: 1   MTKRVMVGMSGGVDSSVTAYVLKQQGYEVIGATMRLHGSDLPGRDARSCASRTCCSLDDV 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +     +        +           ++ K      +    PN  +     +      
Sbjct: 61  EDAKSVARRLGIAHRTIDFTD---RFEDAVIKPFVRAYETARTPNPCIDCNRRLKFGSML 117

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDC-----RHDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   +  G                    +        +L          PL  +
Sbjct: 118 ERALDLGCDYVATGHYAQIVRRGDRFALVRGADASKDQSYVLYSLTQYQLAHTLLPLGGM 177

Query: 176 KKYETWKLAQDIG 188
           +K E   +A + G
Sbjct: 178 RKSEVRAIAAEQG 190


>gi|46579456|ref|YP_010264.1| GMP synthase [Desulfovibrio vulgaris str. Hildenborough]
 gi|120602993|ref|YP_967393.1| GMP synthase [Desulfovibrio vulgaris DP4]
 gi|50400347|sp|Q72D86|GUAA_DESVH RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226738438|sp|A1VEV0|GUAA_DESVV RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|46448870|gb|AAS95523.1| GMP synthase [Desulfovibrio vulgaris str. Hildenborough]
 gi|120563222|gb|ABM28966.1| GMP synthase (glutamine-hydrolyzing) [Desulfovibrio vulgaris DP4]
 gi|311233272|gb|ADP86126.1| GMP synthase, large subunit [Desulfovibrio vulgaris RCH1]
          Length = 515

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 51/185 (27%), Gaps = 18/185 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+            ++  +  D G     E +    V   + E       
Sbjct: 221 VVCALSGGIDSTVVAVLLHKAIGKQLHCIFVDNGVLRLNEGQ---EVVDYLREHFDLNLK 277

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +       L+ L  +      + +                 ++ FL         +   
Sbjct: 278 YVQAQERF-LSKLHGVDDPEQKRKIIGYTFIEVFDEEAKALGHVDFLAQGTLYPDVIE-- 334

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                      S         I++      L  + ++ +  PL  L K E  K+A ++G 
Sbjct: 335 -----------SVSHKGPSAVIKSHHNVGGLPEKMNLKLIEPLRELFKDEVRKVAAELGL 383

Query: 190 QDLVN 194
            D + 
Sbjct: 384 PDFII 388


>gi|194334691|ref|YP_002016551.1| tRNA-specific 2-thiouridylase MnmA [Prosthecochloris aestuarii DSM
           271]
 gi|194312509|gb|ACF46904.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prosthecochloris aestuarii DSM 271]
          Length = 362

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 49/193 (25%), Gaps = 14/193 (7%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN  I    + ++  SGG DS+      +++   V  L            +    V   +
Sbjct: 1   MNATISPT-TVIVGLSGGVDSAVAACLLIEQGYSVTGLHIR---TLDDSPDSAELVASTL 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                   D       +    L +     +             PN       +I      
Sbjct: 57  -----VVSDLDEYRFPVFSLNLSNSFREHVIMTFQKDYLAGKTPNPCTLCNKLIKWEGLL 111

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A   G   +  G           CR      +          LG ++      PL   
Sbjct: 112 KGAQLCGAEYVATGHYARIQHSDSSCRLLKGVDNKKDQSYFLWMLGRKTLEKTLFPLGEY 171

Query: 176 KKYETWKLAQDIG 188
            K E  +LA+  G
Sbjct: 172 SKPEVRQLARRFG 184


>gi|304383810|ref|ZP_07366268.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella marshii DSM 16973]
 gi|304335066|gb|EFM01338.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella marshii DSM 16973]
          Length = 382

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/189 (12%), Positives = 47/189 (24%), Gaps = 8/189 (4%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M + +     A+ L SGG DSS  L        + +      G     E +C     + +
Sbjct: 20  MKESLSNRKIAV-LLSGGVDSSVVLHELSRAGLQPDCFYIKIGPEEHEEWDCSSE--EDL 76

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                          ++      +  +      +             +  R I F  F  
Sbjct: 77  EMAGAVAARYGCRLEVVD--CHQEYWNQVTKYTLEKVKAGFTPNPDVMCNRLIKFGAFDE 134

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH---TPLMWLKK 177
              +   +             G+           +    L       +     P+   +K
Sbjct: 135 KKGHEYELIATGHYAQTEIIDGHKWLVTSPDPVKDQTDFLAQLYDWQLRKALFPIGHYRK 194

Query: 178 YETWKLAQD 186
            E  ++A+ 
Sbjct: 195 EEVRQIAER 203


>gi|262306105|gb|ACY45645.1| gln amidotransferase [Skogsbergia lerneri]
          Length = 197

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 2/62 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               L+L SGG DS+ C +      R D+V  +  + G   K E         ++   + 
Sbjct: 43  NNKVLMLVSGGVDSTVCAALLQKALRSDQVIAVHINNGFMRKGETSQVEQSLVRVGVKLK 102

Query: 66  KW 67
             
Sbjct: 103 VV 104


>gi|71993933|ref|NP_001024799.1| hypothetical protein M02D8.4 [Caenorhabditis elegans]
 gi|51536861|gb|AAU05557.1| Asparagine synthetase protein 2, isoform c, confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 538

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 42/170 (24%), Gaps = 6/170 (3%)

Query: 13  LLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           +L SGG DSS   S A      R   V   SF  G  +            K +       
Sbjct: 234 VLLSGGLDSSLVSSIASREMKRRGMAVH--SFSIGVDHNSPDVVAARKVAKFIGTTHHEF 291

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E+ I  L  L     S    ++        L          + L          G 
Sbjct: 292 YFSIEEGIKNLRKLIWHLESYDVTSIRASTPMYFLSEEIRKLGIKVVLSGEGADEIFGGY 351

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
                   + D+      R   +   +           +V   + +L K 
Sbjct: 352 LYFHNAPSDEDFQKETIDRVLHLYTSDCLRADKSSMAHSVEVRVPFLDKA 401


>gi|296414926|ref|XP_002837146.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295633000|emb|CAZ81337.1| unnamed protein product [Tuber melanosporum]
          Length = 402

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 55/211 (26%), Gaps = 26/211 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
                L +SGG D+S  L+W +++   V     D GQ  + + E       KI       
Sbjct: 3   KEKVCLAYSGGLDTSCILAWLIEKGYEVVCFMADIGQ--EEDFEAAKEKALKIGASS--- 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                  H++ L    +         +       N+          +       +A + G
Sbjct: 58  ------VHVVDLR--KEFVEKLCYPAIQCNAIYENVYLLGTSLARPVIARGQIAVAEQEG 109

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V   C    +                  +        +         +    A ++
Sbjct: 110 C-TLVSHGCTGKGNDQVRFELAFYALKPDVKVIAPWRLPEFYNRFAGRN--DLLAYAAEV 166

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGC 218
           G      + + ++ T    K     E    C
Sbjct: 167 G------VPVSQTKT----KPWSMDENLAHC 187


>gi|294677198|ref|YP_003577813.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhodobacter capsulatus SB 1003]
 gi|294476018|gb|ADE85406.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhodobacter capsulatus SB 1003]
          Length = 354

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 48/181 (26%), Gaps = 10/181 (5%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
            SGG DSS   +   +    V  ++   Y     +  +   C  + I +     +     
Sbjct: 1   MSGGVDSSVVAAMLKEEGYDVIGVTLQLYDHGAALAKKGACCAGQDIHDARRVAEAMNFP 60

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL--GITNI 131
            ++L           ++ +  A        P   +     +        A  L       
Sbjct: 61  HYVLDYEN---TFREAVIEEFADAYLAGATPVPCIRCNERVKFKDLLETARDLDADCMAT 117

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL----KKYETWKLAQDI 187
              +     +  P+         + +  L   +   +      L     K ET KLA   
Sbjct: 118 GHYIQRKLGAHGPELHSAADPMRDQSYFLFSTTPEQLAFLRFPLGHLPSKAETRKLAARF 177

Query: 188 G 188
           G
Sbjct: 178 G 178


>gi|227529160|ref|ZP_03959209.1| argininosuccinate synthase [Lactobacillus vaginalis ATCC 49540]
 gi|227350923|gb|EEJ41214.1| argininosuccinate synthase [Lactobacillus vaginalis ATCC 49540]
          Length = 421

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 48/178 (26%), Gaps = 13/178 (7%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M DI       +L +SGG D+S  ++W  ++   V     D G     E +    +++K 
Sbjct: 1   MEDIQMTKEKIVLAYSGGLDTSVAIAWLKNKGYDVIACCIDVG-----EGKDLEAIKEK- 54

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                     +G    + +    D +   +   +                   + +    
Sbjct: 55  -------GKQVGAWKSVVIDAKHDFAEQFVLPALQAHAMYEQKYPLVSALSRPLIVQKLV 107

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            +A   G T I  G                  A E  I   +          +   K 
Sbjct: 108 AVAREYGATAIAHGCTGKGNDQVRFEAGIHALAPEMKIEDPIRDWHWSREEEIQYAKD 165


>gi|51891639|ref|YP_074330.1| GMP synthase [Symbiobacterium thermophilum IAM 14863]
 gi|81389576|sp|Q67S57|GUAA_SYMTH RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|51855328|dbj|BAD39486.1| GMP synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 513

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 56/188 (29%), Gaps = 22/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   L   SGG DSS           D++  +  D+G   K E E    V +   +    
Sbjct: 218 SGRVLCALSGGVDSSVAAVLVHKAVGDQLTCIFVDHGLMRKGEPE---QVVRTFRDHFHI 274

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +       L+ L  ++     + +                    F+      A +L
Sbjct: 275 HLVHVDASERF-LSKLRGVTDPEQKRKIIGNE----------------FIRLFEDEARKL 317

Query: 127 G-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           G I  +V G    D           I++      L  +    +  P   L K E   + +
Sbjct: 318 GQIDFLVQGTVYPDVIESGTETARVIKSHHNVGGLPEDMRFQLIEPFRQLFKDEVRAVGR 377

Query: 186 DIGGQDLV 193
            +G  + +
Sbjct: 378 ALGVPEEI 385


>gi|291288175|ref|YP_003504991.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Denitrovibrio acetiphilus DSM 12809]
 gi|290885335|gb|ADD69035.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Denitrovibrio acetiphilus DSM 12809]
          Length = 344

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/182 (12%), Positives = 45/182 (24%), Gaps = 8/182 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                L+  SGG DS+       ++   V   +  +       L       K++  +   
Sbjct: 1   MKEKVLIAMSGGVDSTLTAHIMKEKGYDVIGCTIKFFDEQTEALHDGEKAAKELG-IDWY 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           + D         ++          T N       +   N              AT  Y  
Sbjct: 60  YADYTDYFKEDVISYFIRTYIQGRTPNPCAHCNRHAKFNYLFREMKSKGATKIATGHYA- 118

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                   V   +   +   +            L       +  PL  ++K +    A +
Sbjct: 119 ------GKVKVGEKYFFKKGQDVRKDQSYYLCLLKDHQREVIEFPLGEMEKTDVKAKAAE 172

Query: 187 IG 188
           +G
Sbjct: 173 LG 174


>gi|260431981|ref|ZP_05785952.1| argininosuccinate synthase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260415809|gb|EEX09068.1| argininosuccinate synthase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 408

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 46/157 (29%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W   +    V T + D GQ  ++E        + +   
Sbjct: 1   MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEP--ARQKAELLGIK 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +         +  +   + +   ++    +  R I         A
Sbjct: 59  PENI--YIEDIREEFVRDFVFPMFRANAQYEGLYLLGTSIARPLISKRLIEIAKETGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         + + Y       + A     +L
Sbjct: 117 VAHGATGKGNDQVRFELAAYALNPDIKVIAPWREWDL 153


>gi|172040791|ref|YP_001800505.1| argininosuccinate synthase [Corynebacterium urealyticum DSM 7109]
 gi|229889873|sp|B1VH30|ASSY_CORU7 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|171852095|emb|CAQ05071.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 399

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 1/51 (1%)

Query: 7  KAPSALLLFSGGQDSSTC-LSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
               +L +SGG D++      A +R   V  +S D GQ  +     R   
Sbjct: 1  MKDRVVLAYSGGLDTTVAISWIAKERNAEVIAVSIDLGQGGEDMETVRQRA 51


>gi|71735842|ref|YP_275272.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|123635957|sp|Q48H61|MNMA_PSE14 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|71556395|gb|AAZ35606.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 376

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 51/196 (26%), Gaps = 13/196 (6%)

Query: 1   MND---IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           M D      +    ++  SGG DSS      +++  +VE L     + +     C    R
Sbjct: 1   MRDPAPSNSEMKRVIVGMSGGVDSSVSAVLLMEQGYQVEGLFMKNWEEDDGTEYC--TAR 58

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           + + +          + H        +   +     +             +  R  I   
Sbjct: 59  EDLADAQAVCDKIGIKLHT--ANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFK 115

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPL 172
                A  LG   I  G                              +G E       P+
Sbjct: 116 AFLDYALMLGADLIATGHYVRRRDIDGRTELLKGLDPNKDQSYFLHAVGGEQIARTLFPV 175

Query: 173 MWLKKYETWKLAQDIG 188
             L+K E   +A+  G
Sbjct: 176 GELEKPEVRAIAEKHG 191


>gi|66046419|ref|YP_236260.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas syringae pv.
           syringae B728a]
 gi|75501528|sp|Q4ZRK0|MNMA_PSEU2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|63257126|gb|AAY38222.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudomonas syringae pv. syringae B728a]
          Length = 376

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 51/196 (26%), Gaps = 13/196 (6%)

Query: 1   MND---IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           M D      +    ++  SGG DSS      +++  +VE L     + +     C    R
Sbjct: 1   MRDPAPSNSEMKRVIVGMSGGVDSSVSAVLLMEQGYQVEGLFMKNWEEDDGTEYC--TAR 58

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           + + +          + H        +   +     +             +  R  I   
Sbjct: 59  EDLADAQAVCDKIGIKLHT--ANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFK 115

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPL 172
                A  LG   I  G                              +G E       P+
Sbjct: 116 AFLDYALMLGADLIATGHYVRRRDIDGRTELLKGLDPNKDQSYFLHAVGGEQIARTLFPV 175

Query: 173 MWLKKYETWKLAQDIG 188
             L+K E   +A+  G
Sbjct: 176 GELEKPEVRAIAEKHG 191


>gi|17547442|ref|NP_520844.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ralstonia solanacearum GMI1000]
 gi|24638316|sp|Q8XVV4|MNMA_RALSO RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|17429745|emb|CAD16430.1| probable trna
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           protein [Ralstonia solanacearum GMI1000]
          Length = 370

 Score = 52.6 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 46/188 (24%), Gaps = 10/188 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS        +   V  L     + +     C     +  ++++    
Sbjct: 4   KRVVVGMSGGVDSSVTAWLLKQQGYEVIGLFMKNWEDDDDSEYCSTR--QDWIDVVSVAD 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               +   +            +  +   +      PN  V     I        A  LG 
Sbjct: 62  LIGVD---VEAVNFAAEYKDRVFADFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMALGA 118

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             I  G                    T         L          PL  + K    ++
Sbjct: 119 DTIATGHYARVREAGGRFELLKAFDHTKDQSYFLHRLNQAQLSRTLFPLGEMPKTRVREI 178

Query: 184 AQDIGGQD 191
           A +IG  +
Sbjct: 179 AAEIGLPN 186


>gi|262306099|gb|ACY45642.1| gln amidotransferase [Prokoenenia wheeleri]
          Length = 196

 Score = 52.2 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 21/61 (34%), Gaps = 2/61 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              L+L SGG DS+ C +          V  +  D G   K E        K++   +  
Sbjct: 44  NKVLMLLSGGVDSTVCAALLHKSLKEGQVIAVHIDNGFMRKNESLQVEQSLKRLGLKIKV 103

Query: 67  W 67
            
Sbjct: 104 V 104


>gi|262039106|ref|ZP_06012439.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Leptotrichia goodfellowii F0264]
 gi|261746895|gb|EEY34401.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Leptotrichia goodfellowii F0264]
          Length = 365

 Score = 52.2 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 52/188 (27%), Gaps = 10/188 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMP 65
           +    +L  SGG DSS       ++   V  +   ++ +++   +       K +V +  
Sbjct: 2   RNKKVVLGMSGGVDSSVAAILLKEQGYDVIGVFMKNWEEKDDNGVCMSEEDYKDVVAVAE 61

Query: 66  KWK------DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           + +      + + E          D      T N  +          F+     I     
Sbjct: 62  QLEIPYYSVNFVKEYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLDYAMKIGADHV 121

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           AT  Y      I         S       D          L  +    V  P+    K +
Sbjct: 122 ATGHY---ARIIHEEKDGKIKSVMLRGIDDNKDQTYFLCQLNQKQLEKVLFPIGEYTKPQ 178

Query: 180 TWKLAQDI 187
             ++A+  
Sbjct: 179 IREIAEKY 186


>gi|253581434|ref|ZP_04858659.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Fusobacterium varium ATCC 27725]
 gi|251836504|gb|EES65039.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Fusobacterium varium ATCC 27725]
          Length = 333

 Score = 52.2 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 7/82 (8%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVET---LSFDYGQRNKVELECRLCVRKKIV 61
          ++K   AL LFSGG DS+  +    D+   V     +S  +G +     E    + +++ 
Sbjct: 1  MEKKIKALALFSGGLDSALAVKVIKDQGVEVIALNFVSHFFGGK----NEKAEKMAEQLG 56

Query: 62 ELMPKWKDSLGEDHILPLAILG 83
            +           I+   + G
Sbjct: 57 IKLEYIDFKSRHTEIVKNPVYG 78


>gi|254448672|ref|ZP_05062130.1| argininosuccinate synthase [gamma proteobacterium HTCC5015]
 gi|198261680|gb|EDY85967.1| argininosuccinate synthase [gamma proteobacterium HTCC5015]
          Length = 403

 Score = 52.2 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 46/159 (28%), Gaps = 9/159 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S    W  D +   V T + D GQ  ++E          I E+
Sbjct: 1   MSDVKKVVLAYSGGLDTSIIAKWLQDTYQCEVVTFTADLGQGEEIEPARAKAQAMGIQEI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                ++    D + P+     I         ++           +  R I         
Sbjct: 61  YIEDLREEFVRDFVFPMFRANAIYEGEYLLGTSIARP-------LISKRLIEIANETGAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
           A   G T         +   Y       + A     +L 
Sbjct: 114 AISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLN 152


>gi|152993069|ref|YP_001358790.1| thiamine biosynthesis protein ThiI [Sulfurovum sp. NBC37-1]
 gi|151424930|dbj|BAF72433.1| thiamin biosynthesis protein ThiI [Sulfurovum sp. NBC37-1]
          Length = 486

 Score = 52.2 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 52/179 (29%), Gaps = 25/179 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS+      + R  +   + F+ G            +   + ++       
Sbjct: 188 VLSLMSGGFDSTVASYLTMKRGIKTHFIFFNLGG-------AAHEI--GVKQVSLYLWSR 238

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +          S     V  +I  +            + L+ A  +A  +GI  
Sbjct: 239 YGTSHPVRFI-------SVPFDTVVEEIFRSTAETYMGVTLKRLMLMAAEKIANEMGIDA 291

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
           +V G      S         I  +   +         V  PL    K +   +A  IG 
Sbjct: 292 LVTGESVAQVSSQTLRNLALIDQVTNKL---------VLRPLATFNKPDIIDIATQIGT 341


>gi|134103131|ref|YP_001108792.1| GMP synthase [Saccharopolyspora erythraea NRRL 2338]
 gi|291003926|ref|ZP_06561899.1| GMP synthase [Saccharopolyspora erythraea NRRL 2338]
 gi|133915754|emb|CAM05867.1| GMP synthase glutamine amidotransferase [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 528

 Score = 52.2 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 52/187 (27%), Gaps = 13/187 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             A+   SGG DS+   +       D++  +  D+G      L       +   + +   
Sbjct: 224 KRAICGLSGGVDSAVAAALVQRAVGDQLTCVFVDHG------LLRAGERAQVERDFVAAT 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              L         +      +   +   +  ++                  A   A    
Sbjct: 278 GVRLVTIDARDRFLAALAGVTDPEEKRKIIGREFIRVFEQAARDLQ-----AEAGAEGEQ 332

Query: 128 ITNIVIGVCETD-YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           I  +V G    D            I++      L  +    +  PL  L K E  ++  +
Sbjct: 333 IDFLVQGTLYPDVVESGGGSGAANIKSHHNVGGLPEDLQFDLVEPLRALFKDEVRRVGLE 392

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 393 LGLPETI 399


>gi|87120376|ref|ZP_01076271.1| thiamine biosynthesis protein ThiI [Marinomonas sp. MED121]
 gi|86164479|gb|EAQ65749.1| thiamine biosynthesis protein ThiI [Marinomonas sp. MED121]
          Length = 483

 Score = 52.2 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 55/189 (29%), Gaps = 25/189 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS+      + R  +     F+ G               +I     +    
Sbjct: 180 VLSLISGGYDSTVSTYMTMSRGLKTHFCFFNLGGD-----------AHEIGV--KQVSWY 226

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           L E +    + +G    +   ++V  +I      +        + L  A  +   LG   
Sbjct: 227 LWEKY---GSNIGVKFVTIPFEDVVGEILTKVDNSQMGVILKRMMLRAAGKVMEDLGAKA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G C    S         I  +   +         V  PL+   K E    A  IG  
Sbjct: 284 LVTGECVAQVSSQTLVNLKVIDDVTDEL---------VIRPLITTNKQEIIDQAAKIGTA 334

Query: 191 DLVNLILEE 199
                I E 
Sbjct: 335 AFAASIPEY 343


>gi|298487541|ref|ZP_07005583.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|298157925|gb|EFH99003.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
          Length = 376

 Score = 52.2 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 51/196 (26%), Gaps = 13/196 (6%)

Query: 1   MND---IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           M D      +    ++  SGG DSS      +++  +VE L     + +     C    R
Sbjct: 1   MRDPAPSNSEMKRVIVGMSGGVDSSVSAVLLMEQGYQVEGLFMKNWEEDDGTEYC--TAR 58

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           + + +          + H        +   +     +             +  R  I   
Sbjct: 59  EDLADAQAVCDKIGIKLHT--ANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFK 115

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPL 172
                A  LG   I  G                              +G E       P+
Sbjct: 116 AFLDYALMLGADLIATGHYVRRRDTDGRTELLKGLDPNKDQSYFLHAVGGEQIARTLFPV 175

Query: 173 MWLKKYETWKLAQDIG 188
             L+K E   +A+  G
Sbjct: 176 GELEKPEVRAIAEKHG 191


>gi|288803674|ref|ZP_06409104.1| GMP synthase [Prevotella melaninogenica D18]
 gi|288333914|gb|EFC72359.1| GMP synthase [Prevotella melaninogenica D18]
          Length = 514

 Score = 52.2 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 59/188 (31%), Gaps = 21/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS C           +  +  D+G   K E    +   K +      
Sbjct: 213 NDRVILGLSGGVDSSVCAVLLNKAIGKNLTCIFVDHGMLRKNEFTKVMDAYKGLG----- 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                       L ++G  +     K++      +      + GR+ + +  A       
Sbjct: 268 ------------LNVIGVDASEQFFKDLEGVT--DPEQKRKIIGRDFVEVFNAEAKKIT- 312

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G    D           I++      L  E H+ +  PL WL K E  ++  +
Sbjct: 313 DAKWLAQGTIYPDRIESLSITGMVIKSHHNVGGLPEEMHLQLCEPLRWLFKDEVRRVGYE 372

Query: 187 IGGQDLVN 194
           +G  + + 
Sbjct: 373 LGMPERLI 380


>gi|302345658|ref|YP_003814011.1| GMP synthase (glutamine-hydrolyzing) [Prevotella melaninogenica
           ATCC 25845]
 gi|302149063|gb|ADK95325.1| GMP synthase (glutamine-hydrolyzing) [Prevotella melaninogenica
           ATCC 25845]
          Length = 514

 Score = 52.2 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 59/188 (31%), Gaps = 21/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS C           +  +  D+G   K E    +   K +      
Sbjct: 213 NDRVILGLSGGVDSSVCAVLLNKAIGKNLTCIFVDHGMLRKNEFTKVMDAYKGLG----- 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                       L ++G  +     K++      +      + GR+ + +  A       
Sbjct: 268 ------------LNVIGVDASEQFFKDLEGVT--DPEQKRKIIGRDFVEVFNAEAKKIT- 312

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G    D           I++      L  E H+ +  PL WL K E  ++  +
Sbjct: 313 DAKWLAQGTIYPDRIESLSITGMVIKSHHNVGGLPEEMHLQLCEPLRWLFKDEVRRVGYE 372

Query: 187 IGGQDLVN 194
           +G  + + 
Sbjct: 373 LGMPERLI 380


>gi|11497869|ref|NP_069091.1| GMP synthase subunit B [Archaeoglobus fulgidus DSM 4304]
 gi|13626770|sp|O29986|GUAAB_ARCFU RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
           AltName: Full=GMP synthetase
 gi|2650384|gb|AAB90977.1| GMP synthase (guaA-1) [Archaeoglobus fulgidus DSM 4304]
          Length = 303

 Score = 52.2 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 59/204 (28%), Gaps = 14/204 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K   A++  SGG DSS C   A     DR+  +  D G   + E E    +   +  +  
Sbjct: 19  KDGKAIIALSGGVDSSVCTVLAHKALGDRLIPVFVDTGLMREGEPEKIKEIFGNMGLVFI 78

Query: 66  KWKDSLGE-DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             K+   +    +            L   +  ++ + +     + G     ++ +     
Sbjct: 79  DAKEEFFKALKGVTDPEEKRKVIGELFVRIFERVAEEHNAEYLIQGTIYPDIIESQGGIK 138

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------------VHTPL 172
                       +      P          E A  LG+   ++                 
Sbjct: 139 SHHNVGGFPTSYKFKDVIEPLRELYKDEVREVARYLGLPKEISERMPFPGPGLAVRIVGE 198

Query: 173 MWLKKYETWKLAQDIGGQDLVNLI 196
           +  +K E  + A  I  ++L +  
Sbjct: 199 VTPEKVEIVRKANKIVEEELADYD 222


>gi|254468020|ref|ZP_05081426.1| argininosuccinate synthase [beta proteobacterium KB13]
 gi|207086830|gb|EDZ64113.1| argininosuccinate synthase [beta proteobacterium KB13]
          Length = 404

 Score = 52.2 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 53/158 (33%), Gaps = 9/158 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +K     +L +SGG D+S  L W  +++   V T + D GQ  ++E       +  I E+
Sbjct: 1   MKSIKKVVLAYSGGLDTSVILKWLQEKYDCEVVTFTADIGQGEEIEPAREKAKQAGIKEI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                ++   +++I P+     I         ++           +  R I         
Sbjct: 61  YIENLEEDFAKNYIFPMFRANAIYEGEYLLGTSIARP-------LIAKRLIEIAAETGAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         + + Y       + A     +L
Sbjct: 114 AIAHGATGKGNDQVRFELNAYALNPDIKVIAPWREWDL 151


>gi|116753546|ref|YP_842664.1| GMP synthase subunit B [Methanosaeta thermophila PT]
 gi|116664997|gb|ABK14024.1| GMP synthase (glutamine-hydrolyzing) [Methanosaeta thermophila PT]
          Length = 302

 Score = 52.2 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 57/185 (30%), Gaps = 29/185 (15%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              A++  SGG DSS C   A     + +  +  D G   + E E       +IVEL   
Sbjct: 19  KGKAIIALSGGVDSSVCAVLAHRALGENLVPVYVDSGLMRRFESE-------RIVELFSH 71

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 +     L  L  ++     + +  +                 F+     +A  +
Sbjct: 72  LNLMKVDASERFLNALRGVTDPEQKRKIIGET----------------FIRVFEEVASEV 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-VHTPLMWLKKYETWKLAQ 185
           G   ++                  I++      L +      +  P+  L K E  ++A+
Sbjct: 116 GAEYLIQ----GTIYPDRIESEGGIKSHHNVGGLPLHIEFKGIIEPMRDLYKDEVREVAR 171

Query: 186 DIGGQ 190
            +G  
Sbjct: 172 ALGLP 176


>gi|260773297|ref|ZP_05882213.1| thiamine biosynthesis protein ThiI [Vibrio metschnikovii CIP 69.14]
 gi|260612436|gb|EEX37639.1| thiamine biosynthesis protein ThiI [Vibrio metschnikovii CIP 69.14]
          Length = 482

 Score = 52.2 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 57/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  +V    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGYDSGVSSYLHIKRGSKVHYCFFNLGGP-------AHEI--GVKQVAHYLWNK 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G       +       S   + V  +I +             +F+  A  +A + GI  
Sbjct: 231 YG-------SSAKVRFISVDFEPVVAEILEKIDDGQMGVVLKRMFMRVAGRIAEKFGIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K +   LA+DIG +
Sbjct: 284 LVTGEAIGQVSSQTLTNLRHIDGVTDRL---------ILRPLINWDKGDIMDLARDIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|83643544|ref|YP_431979.1| thiamine biosynthesis protein ThiI [Hahella chejuensis KCTC 2396]
 gi|83631587|gb|ABC27554.1| thiamine biosynthesis protein ThiI [Hahella chejuensis KCTC 2396]
          Length = 504

 Score = 52.2 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            + L SGG DS       + R  R     F+ G            V  K   L   W+  
Sbjct: 203 VVSLMSGGYDSGVASYLTMKRGMRTHFCFFNLGG-------TAHEVGVKQAALY-LWEKY 254

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G   +           +   + V  +I D    +        + L  A  +A  L  T 
Sbjct: 255 GGGQRV--------KFITVPFEGVVAEILDKIYHSNMGVVLKRMMLRAATQVARDLSATA 306

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G C    S       + I +    +         V  PL+   K +  ++A  IG +
Sbjct: 307 LVTGECVAQVSSQTLTNLNVIDSATDML---------VLRPLIVTDKQDIIRMAGQIGVE 357

Query: 191 DL 192
           + 
Sbjct: 358 EF 359


>gi|302829943|ref|XP_002946538.1| hypothetical protein VOLCADRAFT_120281 [Volvox carteri f.
           nagariensis]
 gi|300268284|gb|EFJ52465.1| hypothetical protein VOLCADRAFT_120281 [Volvox carteri f.
           nagariensis]
          Length = 536

 Score = 52.2 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 51/182 (28%), Gaps = 9/182 (4%)

Query: 11  ALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A+   SGG DS+   +       +R+  +  D G    +    +  V       +     
Sbjct: 232 AICALSGGVDSTVAATLVHKVLGERLHCVFVDNG---LLRYNEQQRVMDTFNNHLH-LPV 287

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +  +   + L  L  +  +           +               L        +  + 
Sbjct: 288 TCVDHSKVMLDRLRGL--TDPEAKRKAIGAEFIEVFKNYATELEQKLGKKPRFLVQGTLY 345

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
             VI  C    SG        I++      L  +   T+  P   L K E   + + +G 
Sbjct: 346 PDVIESCPPPGSGQKHSHT--IKSHHNVGGLPKDLQFTLIEPFRELFKDEVRAVGRLLGV 403

Query: 190 QD 191
            +
Sbjct: 404 PE 405


>gi|134300214|ref|YP_001113710.1| GMP synthase [Desulfotomaculum reducens MI-1]
 gi|134052914|gb|ABO50885.1| GMP synthase (glutamine-hydrolyzing) [Desulfotomaculum reducens
           MI-1]
          Length = 513

 Score = 52.2 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 58/188 (30%), Gaps = 22/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS           D +  +  D+G   K E      V K   +    
Sbjct: 218 NRQVLCALSGGVDSSVAAVLVHRAVGDNLTCVFVDHGLLRKNE---AEQVVKTFRDQFNI 274

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                             + H   ++    K+Q    P          F+      A +L
Sbjct: 275 -----------------KLVHVDASERFLGKLQGVTDPEQKRKIIGTEFIRVFEEEARKL 317

Query: 127 G-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           G I  +V G    D         + I++      L  +    +  PL WL K E  +L +
Sbjct: 318 GEIDFLVQGTLYPDVVESGTATAEVIKSHHNVGGLPEDMKFDLVEPLRWLFKDEVRRLGE 377

Query: 186 DIGGQDLV 193
           ++G  + +
Sbjct: 378 ELGMPEEI 385


>gi|255320585|ref|ZP_05361763.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acinetobacter radioresistens SK82]
 gi|262378583|ref|ZP_06071740.1| tRNA methyl transferase [Acinetobacter radioresistens SH164]
 gi|255302347|gb|EET81586.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acinetobacter radioresistens SK82]
 gi|262299868|gb|EEY87780.1| tRNA methyl transferase [Acinetobacter radioresistens SH164]
          Length = 377

 Score = 52.2 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 57/193 (29%), Gaps = 16/193 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS   +  L +  +VE L     + +     C     + + +    
Sbjct: 1   MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGLFMKNWEEDDGTEYC--TAMEDLADAQAV 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H    A         + ++   +      PN  +     I        A +L
Sbjct: 59  CDRIGIKLHT---ANFAMEYWDRVFEHFLAEYAAGRTPNPDILCNKEIKFRAFLDHAVKL 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLK------- 176
           G   I  G          + + +    +   ++   +       VH   +          
Sbjct: 116 GADFIATGHYARRGETKYNSQGEAYAELLRGVDTNKDQTYFLHAVHGREINKTLFPVGEI 175

Query: 177 -KYETWKLAQDIG 188
            K +  K+A+++G
Sbjct: 176 EKPQVRKIAEELG 188


>gi|229543733|ref|ZP_04432793.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus coagulans 36D1]
 gi|229328153|gb|EEN93828.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus coagulans 36D1]
          Length = 371

 Score = 52.2 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 53/192 (27%), Gaps = 13/192 (6%)

Query: 5   IKKAPS---ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           ++KAP     ++  SGG DSS        +   V  +             C     +   
Sbjct: 1   MQKAPKDTRVVVGMSGGVDSSVAAYLLKQQGYDVIGIFMKNWDDTDENGVC--TATEDYN 58

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +++          + +            +      + +    PN  V     I       
Sbjct: 59  DVIRVCNQIGIPYYAVN---FEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAFLE 115

Query: 122 LAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLK 176
            A  LG   +  G           Y   R       +T     LG      V  P+  L+
Sbjct: 116 HALNLGADYLATGHYARVTHQDGEYKMLRGVDGNKDQTYFLNQLGQYQLSRVMFPIGDLE 175

Query: 177 KYETWKLAQDIG 188
           K    ++A++ G
Sbjct: 176 KPRVREIAKEAG 187


>gi|224536253|ref|ZP_03676792.1| hypothetical protein BACCELL_01120 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522139|gb|EEF91244.1| hypothetical protein BACCELL_01120 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 359

 Score = 52.2 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/192 (9%), Positives = 43/192 (22%), Gaps = 11/192 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +       L+  SGG DS+       ++   +  L+         E      +   +   
Sbjct: 1   MNSPDKRVLVGMSGGIDSTATCLMLKEQGYEIVGLTMWVWGD---EPVEARQLAGSMGIE 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                +      ++    + +                  + N     R +         A
Sbjct: 58  HHVADEREAFRKVIVQNFIDEYCQGRTPNP-------CVMCNPTFKFRILTEWADKLGCA 110

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           +        +                  ++      LG +       PL    K +  + 
Sbjct: 111 FISTGHYSRLEEKNGKIYIVAGDDDKKDQSYF-LWRLGQDVLRRCIFPLGTYTKLQVREY 169

Query: 184 AQDIGGQDLVNL 195
            ++ G Q     
Sbjct: 170 LREKGYQLKAEE 181


>gi|260494072|ref|ZP_05814203.1| tRNA methyl transferase [Fusobacterium sp. 3_1_33]
 gi|260198218|gb|EEW95734.1| tRNA methyl transferase [Fusobacterium sp. 3_1_33]
          Length = 362

 Score = 52.2 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 56/195 (28%), Gaps = 17/195 (8%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D  KK     +  SGG DSST       +   +  ++       K E      V   +  
Sbjct: 18  DSSKKNIKVGVAMSGGVDSSTVAYLLKQQGYDIFGVTMKTF---KDEDSDAKKVCDDLG- 73

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     E ++L +    +     +   V+  +         V  R  I        
Sbjct: 74  ---------IEHYVLDVRD--EFKKKVVDYFVSEYMNGRTPNPCMVCNR-HIKFGKMLDF 121

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHD-TIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
               G + +  G      +G      D     +     +  +    +  P+  L+K +  
Sbjct: 122 ILSKGASFMATGHYTKLKNGLLSVGDDSNKDQVYFLSQIQKDRLNKIIFPVGDLEKSKLR 181

Query: 182 KLAQDIGGQDLVNLI 196
           +LA+ +G +      
Sbjct: 182 ELAEQLGVRVYSKKD 196


>gi|237744375|ref|ZP_04574856.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium sp. 7_1]
 gi|229431604|gb|EEO41816.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium sp. 7_1]
          Length = 362

 Score = 52.2 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 56/195 (28%), Gaps = 17/195 (8%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D  KK     +  SGG DSST       +   +  ++       K E      V   +  
Sbjct: 18  DSSKKNIKVGVAMSGGVDSSTVAYLLKQQGYDIFGVTMKTF---KDEDSDAKKVCDDLG- 73

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     E ++L +    +     +   V+  +         V  R  I        
Sbjct: 74  ---------IEHYVLDVRD--EFKKKVVDYFVSEYMNGRTPNPCMVCNR-HIKFGKMLDF 121

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHD-TIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
               G + +  G      +G      D     +     +  +    +  P+  L+K +  
Sbjct: 122 ILSKGASFMATGHYTKLKNGLLSVGDDSNKDQVYFLSQIQKDRLNKIIFPVGDLEKSKLR 181

Query: 182 KLAQDIGGQDLVNLI 196
           +LA+ +G +      
Sbjct: 182 ELAEQLGVRVYSKKD 196


>gi|167765362|ref|ZP_02437475.1| hypothetical protein BACSTE_03750 [Bacteroides stercoris ATCC
           43183]
 gi|167696990|gb|EDS13569.1| hypothetical protein BACSTE_03750 [Bacteroides stercoris ATCC
           43183]
          Length = 361

 Score = 52.2 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 36/141 (25%), Gaps = 19/141 (13%)

Query: 1   MND---IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           MN+   + K     L+  SGG DS+       ++   +  L+         E      + 
Sbjct: 1   MNEWQNMNKSEKRVLVGMSGGIDSTATCLMLREQGYEIVGLTMWVWGN---EPAEARNLA 57

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
             +        +      I+    +              + +    PN  V    +    
Sbjct: 58  DSMGIEHHVADEREAFRQIIVQNFI-------------DEYRQGRTPNPCVMCNPLFKFR 104

Query: 118 FAATLAYRLGITNIVIGVCET 138
                A +L    I  G    
Sbjct: 105 ILTEWADKLNCRYIATGHYTR 125


>gi|167761107|ref|ZP_02433234.1| hypothetical protein CLOSCI_03505 [Clostridium scindens ATCC 35704]
 gi|167661341|gb|EDS05471.1| hypothetical protein CLOSCI_03505 [Clostridium scindens ATCC 35704]
          Length = 442

 Score = 52.2 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 53/182 (29%), Gaps = 20/182 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +  L     ++  +  ++G   K E E  + V +  +     + 
Sbjct: 149 KVLLALSGGVDSSVVAALLLKAIGQQLVCVHVNHGLMRKNESESVVEVFQNQLHANLIYV 208

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D+           LG +      +     I    +       R +             GI
Sbjct: 209 DAT-------ERFLGKLEGVKDPEEKRKIIGGEFIRVFEEEARKLD------------GI 249

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G    D           +++      L  +    +  PL  L K E      ++G
Sbjct: 250 DFLGQGTIYPDIIESGTKTAKMVKSHHNVGGLPEDLQFELVEPLKQLFKDEVRACGIELG 309

Query: 189 GQ 190
             
Sbjct: 310 LP 311


>gi|255994055|ref|ZP_05427190.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Eubacterium saphenum ATCC 49989]
 gi|255993723|gb|EEU03812.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Eubacterium saphenum ATCC 49989]
          Length = 348

 Score = 52.2 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 61/186 (32%), Gaps = 22/186 (11%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+ +  K   A+  FSGG DS+       ++   V  +    G+             + I
Sbjct: 1   MDRLGDKTKVAV-GFSGGVDSTAACLLLKEKGYDVHPVYLRMGE------------AEDI 47

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            EL     D   E  +L L       ++S+  N      +   PN  +    ++      
Sbjct: 48  SELKKIANDIGLELKVLDLTD---RFNNSVVDNFKKAYMNGMTPNPCIVCNPLVKFRGLM 104

Query: 121 TLAYRLGITNIVIGVCETDYSGYPD---CRHDTIRAIETAINLGMESHVT---VHTPLMW 174
             A   GI  I  G          +   CR    +  ++ +  G++S+V    +     +
Sbjct: 105 DFADDNGIDLIATGHYARIVKNGDNPVLCRGRNAQKDQSYMLYGLDSNVFERLILPLGEY 164

Query: 175 LKKYET 180
             K + 
Sbjct: 165 GNKEDI 170


>gi|149376768|ref|ZP_01894525.1| Argininosuccinate synthase [Marinobacter algicola DG893]
 gi|149358889|gb|EDM47356.1| Argininosuccinate synthase [Marinobacter algicola DG893]
          Length = 403

 Score = 52.2 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 53/174 (30%), Gaps = 9/174 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  + W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MSDIKKVVLAYSGGLDTSVIVRWLQDTYECEVVTFTADIGQGEEVEPARAKAKALGVKEI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                ++    D++ P+         + T      +   ++    +  R I         
Sbjct: 61  YIEDLREEFVRDYVFPM-------FRANTIYEGEYLLGTSIARPLISRRLIEIANETGAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
           A   G T         +   Y       + A     +L     +  +     + 
Sbjct: 114 AISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLNSREKLLAYCDERNIP 167


>gi|150402404|ref|YP_001329698.1| PP-loop domain-containing protein [Methanococcus maripaludis C7]
 gi|150033434|gb|ABR65547.1| PP-loop domain protein [Methanococcus maripaludis C7]
          Length = 296

 Score = 52.2 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/200 (12%), Positives = 54/200 (27%), Gaps = 15/200 (7%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVE-TLSFDYGQRNKVELECRLCVRKKIV 61
           ++  K    +++ SGG+DS+  L+ A D    V   + F +     +       +  +  
Sbjct: 33  ELNLKDEKIVVMLSGGKDSAVALAIAKDLGLNVHLCVHFVHKWSWDISTNEAKKLADRFN 92

Query: 62  ----------ELMPKWKDSLGE-DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPG 110
                     EL  K + + G+    +   I+         +  A  I         + G
Sbjct: 93  VPIIFPDITEELAKKTQGAKGKSICRICKTIMKARMIDIAKEENAKIIMTGETALEKIAG 152

Query: 111 RNIIFLVFAATLAYRLGITNIVIGV---CETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
               ++    +   R     +   +              R           NL     + 
Sbjct: 153 PVFQYMRENNSKLNRKDEFELYKKMELTKVPKRYKIHFFRPLIRVGHFDVFNLQKHYKID 212

Query: 168 VHTPLMWLKKYETWKLAQDI 187
           +        K   W+    +
Sbjct: 213 IKRVSEAGNKIGYWREGCCL 232


>gi|311695258|gb|ADP98131.1| argininosuccinate synthase [marine bacterium HP15]
          Length = 408

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 54/177 (30%), Gaps = 9/177 (5%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
           +  +      +L +SGG D+S  + W  D +   V T + D GQ  +VE          +
Sbjct: 3   SKGMSDIKKVVLAYSGGLDTSVIVRWLQDTYNCEVVTFTADIGQGEEVEPARAKAEALGV 62

Query: 61  VELM-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
            E+     ++    D++ P+         + T      +   ++    +  R I      
Sbjct: 63  KEIYIEDLREEFVRDYVFPM-------FRANTIYEGEYLLGTSIARPLIAKRLIDIANET 115

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
              A   G T         +   Y       + A     +L     +  +     + 
Sbjct: 116 GADAISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLNSREKLLKYCEERNIP 172


>gi|303327985|ref|ZP_07358424.1| GMP synthase [Desulfovibrio sp. 3_1_syn3]
 gi|302861811|gb|EFL84746.1| GMP synthase [Desulfovibrio sp. 3_1_syn3]
          Length = 514

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 51/184 (27%), Gaps = 18/184 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+            R+  +  D G     E E              +  +
Sbjct: 220 VVCALSGGIDSTVVAVLLHRAIGKRLHCIFVDNGLLRLNEGE--------------EVVN 265

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            L E   L L  +          +    ++D       +    I      A    ++   
Sbjct: 266 YLREHFDLNLDFVQAQEL---FLSRLKGVEDPEKKRKIIGHTFIEIFDEEAKKLPQVDFL 322

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                  +   S         I++      L     + +  PL  L K E  K+A ++G 
Sbjct: 323 AQGTLYPDVIESVSHKGPSAVIKSHHNVGGLPDTMKLKLIEPLRELFKDEVRKVAAELGM 382

Query: 190 QDLV 193
            D +
Sbjct: 383 PDSI 386


>gi|296114840|ref|ZP_06833488.1| tRNA-specific 2-thiouridylase MnmA [Gluconacetobacter hansenii ATCC
           23769]
 gi|295978546|gb|EFG85276.1| tRNA-specific 2-thiouridylase MnmA [Gluconacetobacter hansenii ATCC
           23769]
          Length = 358

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 38/134 (28%), Gaps = 3/134 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DSS   +  ++    V   +       +   +   C  + I +       
Sbjct: 2   RILVAMSGGVDSSVVAARLVEEGHEVVGATLQLYDSRESARKGACCAGRDIHDARRVADR 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                +++           S+ +  A    +   P   V     +       +A  LG+ 
Sbjct: 62  LGIAHYVID---AERRFRDSVIETFADAYAEGETPVPCVACNQGVKFTDLLGMARDLGVD 118

Query: 130 NIVIGVCETDYSGY 143
            +  G       G 
Sbjct: 119 AMATGHYVRRIEGP 132


>gi|227364875|ref|ZP_03848921.1| argininosuccinate synthase [Lactobacillus reuteri MM2-3]
 gi|325682500|ref|ZP_08162017.1| argininosuccinate synthase [Lactobacillus reuteri MM4-1A]
 gi|227070079|gb|EEI08456.1| argininosuccinate synthase [Lactobacillus reuteri MM2-3]
 gi|324978339|gb|EGC15289.1| argininosuccinate synthase [Lactobacillus reuteri MM4-1A]
          Length = 415

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 49/178 (27%), Gaps = 13/178 (7%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D I      +L +SGG D+S  ++W  ++   V     D G     E +    +++K 
Sbjct: 1   MEDEIMSKEKIVLAYSGGLDTSVAIAWLKNKGYDVIACCIDVG-----EGKDLEAIKEK- 54

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                     +G    + +    D +   +   +                   + +    
Sbjct: 55  -------GLQVGAWKSVVIDAKRDFAEQFVLPALQAHAMYEQKYPLVSALSRPLIVQKLV 107

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            +A + G T I  G                  A E  I   +          +   K 
Sbjct: 108 AVANQYGATAIAHGCTGKGNDQVRFEAGIHALAPEMKIEDPIRDWHWSREEEIQYAKD 165


>gi|329123447|ref|ZP_08252011.1| thiamine biosynthesis protein ThiI [Haemophilus aegyptius ATCC
           11116]
 gi|327471029|gb|EGF16484.1| thiamine biosynthesis protein ThiI [Haemophilus aegyptius ATCC
           11116]
          Length = 485

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 57/183 (31%), Gaps = 27/183 (14%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKWKD 69
            L L SGG DS       + R  RV    F+ G   +++ ++               W+ 
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGGTVHEIGVKQM---------AYHIWQR 230

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +AI  +     + + V        L    V   + +        A R  I 
Sbjct: 231 YSASHKVRFIAINFEGVVGEILEKVDNGQMGVVLKRMMVRAASKV--------AQRFNIE 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      S         I     A+         V  PL+   K +   +A++IG 
Sbjct: 283 AIVTGEALGQVSSQTLTNLRLIDEAADAL---------VLRPLITHDKEQIIAMAKEIGT 333

Query: 190 QDL 192
            D+
Sbjct: 334 DDI 336


>gi|297562935|ref|YP_003681909.1| GMP synthase, large subunit [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296847383|gb|ADH69403.1| GMP synthase, large subunit [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 526

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 54/185 (29%), Gaps = 15/185 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DS+   +       D++  +  D+G   K E      V K  V +    
Sbjct: 222 KRVICALSGGVDSAVAGALVQRAVGDQLTCVFVDHGLLRKGE---AEQVEKDFVAIT--- 275

Query: 68  KDSLGEDHILP--LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                +  ++      L  ++  S  +     I    +       R ++           
Sbjct: 276 ---GAKLKVVDAEERFLSALAGVSDPEEKRKIIGREFIRVFEQAAREVVAESGETGAEVE 332

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                +   +               I++      L  +   T+  PL  L K E  K+ +
Sbjct: 333 ---FLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPDDLQFTLVEPLRELFKDEVRKVGE 389

Query: 186 DIGGQ 190
           ++G  
Sbjct: 390 ELGLP 394


>gi|241557997|ref|XP_002400368.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
           putative [Ixodes scapularis]
 gi|215501775|gb|EEC11269.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
           putative [Ixodes scapularis]
          Length = 384

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 33/135 (24%), Gaps = 4/135 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +   SGG DSS            V  +       +  +  C L       E   KW  
Sbjct: 7   KVVCGMSGGVDSSVAAFLLRKSGYDVTGVFMRNWDPHDADSHCDLDA----DETDAKWVC 62

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                  + +  +    H+  +  +             +  R I F  F      R G  
Sbjct: 63  DTLGIPFMTVDFVKPYWHNVFSPMLQEYQDGLTPNPDIMCNRVIKFGAFHRHAVKRFGAD 122

Query: 130 NIVIGVCETDYSGYP 144
            +  G      +   
Sbjct: 123 AVATGHYARIRNLPD 137


>gi|171913655|ref|ZP_02929125.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Verrucomicrobium spinosum DSM 4136]
          Length = 365

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 49/187 (26%), Gaps = 12/187 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L   SGG DSS   +  +     V             E     C  ++ +E      D
Sbjct: 2   KILAALSGGVDSSVAAALLVREGHDVSGAYMKNWIN--EENIIGHCPWQEDIEDARAVAD 59

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG +  +    L       + K +    Q+   PN  V     +        A   G  
Sbjct: 60  QLGIEFRVV--NLMREYREKVVKYLLAGYQEGITPNPDVMCNREMKFGVLWEWAKDHGYD 117

Query: 130 NIV------IGVCETDYSGYPDCRHDTIRAIETAINLGMES-HVTVHTPLM-WLKKYETW 181
            I         +     +     R       +T     M    V +    +  L K E  
Sbjct: 118 AIATGHYARWELPAEPGAHPIVRRGVDGNKDQTYFLAMMRPEQVEIARFPIGHLPKAEVR 177

Query: 182 KLAQDIG 188
             A  +G
Sbjct: 178 VEASRLG 184


>gi|167574982|ref|ZP_02367856.1| hypothetical protein BoklC_34455 [Burkholderia oklahomensis C6786]
          Length = 468

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 57/220 (25%), Gaps = 20/220 (9%)

Query: 13  LLFSGGQDSS--TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           + FS G DS     L         V  +  D           R         L  K  + 
Sbjct: 151 VPFSHGLDSYGQVRLWQREHPDTEVVCVFAD----------ARTSGVDHGNGLKRKTSEH 200

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           +     + + +       +     +       L            ++        +G + 
Sbjct: 201 IQY---VRVPVSVKPMRRAEPSFRSRPFMFYLLAALGAIESGANKVMIPENGQGSIGGSL 257

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S YP         +   +       V  + P ++  K    +   D+G  
Sbjct: 258 IVTGHEAKHRSCYPGFT----AKLSRFVEALTGKRVKFYHPALFETKGAVLRALADVGED 313

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
               L    S +C   +   R    + C  C  C LR+  
Sbjct: 314 VRAVLGRHRSCSC-DARLTSRDGQMFHCGVCGNCLLRRTA 352


>gi|145629451|ref|ZP_01785249.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae 22.1-21]
 gi|144978294|gb|EDJ88058.1| thiamine biosynthesis protein ThiI [Haemophilus influenzae 22.1-21]
          Length = 485

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 57/183 (31%), Gaps = 27/183 (14%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKWKD 69
            L L SGG DS       + R  RV    F+ G   +++ ++               W+ 
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGGTVHEIGVKQM---------AYHIWQR 230

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +AI  +     + + V        L    V   + +        A R  I 
Sbjct: 231 YSASHKVRFIAINFEGVVGEILEKVDNGQMGVVLKRMMVRAASKV--------AQRFNIE 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      S         I     A+         V  PL+   K +   +A++IG 
Sbjct: 283 AIVTGEALGQVSSQTLTNLRLIDEAADAL---------VLRPLITHDKEQIIAMAKEIGT 333

Query: 190 QDL 192
            D+
Sbjct: 334 DDI 336


>gi|332672802|gb|AEE69619.1| tRNA methyltransferase [Helicobacter pylori 83]
          Length = 350

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +KK   AL LFSGG DS   +   +D+   V  L F+ G
Sbjct: 1  MKKI-KALALFSGGLDSLLSMKLLIDQGIEVSALHFNIG 38


>gi|317181301|dbj|BAJ59085.1| argininosuccinate synthase [Helicobacter pylori F57]
          Length = 350

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +KK   AL LFSGG DS   +   +D+   V  L F+ G
Sbjct: 1  MKKI-KALALFSGGLDSLLSMKLLIDQGIEVSALHFNIG 38


>gi|300113670|ref|YP_003760245.1| argininosuccinate synthase [Nitrosococcus watsonii C-113]
 gi|299539607|gb|ADJ27924.1| argininosuccinate synthase [Nitrosococcus watsonii C-113]
          Length = 405

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 47/158 (29%), Gaps = 9/158 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  +     V T + D GQ  +V           + E+
Sbjct: 1   MSAIKKVVLAYSGGLDTSVILKWLQETYGCEVVTFTADIGQGEEVAPARAKAEALGVKEI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                ++    D++ P+         + T      +   ++    +  R           
Sbjct: 61  YIEDLREEFCRDYVFPM-------FRANTLYEGEYLLGTSIARPLIAKRLAEIASVTGAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         +   Y       + A     +L
Sbjct: 114 AVAHGATGKGNDQVRFELGVYALQPDIQVIAPWREWDL 151


>gi|315586002|gb|ADU40383.1| tRNA methyltransferase [Helicobacter pylori 35A]
          Length = 350

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +KK   AL LFSGG DS   +   +D+   V  L F+ G
Sbjct: 1  MKKI-KALALFSGGLDSLLSMKLLIDQGIEVSALHFNIG 38


>gi|269962339|ref|ZP_06176689.1| thiamin biosynthesis protein ThiI [Vibrio harveyi 1DA3]
 gi|269832835|gb|EEZ86944.1| thiamin biosynthesis protein ThiI [Vibrio harveyi 1DA3]
          Length = 482

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 57/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  +V    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGP-------AHEI--GVKQVSHYLWNK 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G       +       S   + V  +I +             +F+  A  +A ++ I  
Sbjct: 231 YG-------SSAKVRFISVDFEPVVAEILEKVDDGQMGVILKRMFMRAAGMIAQKMKIEA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K +   LA++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIINLAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|269965066|ref|ZP_06179231.1| thiamin biosynthesis protein ThiI [Vibrio alginolyticus 40B]
 gi|269830369|gb|EEZ84594.1| thiamin biosynthesis protein ThiI [Vibrio alginolyticus 40B]
          Length = 482

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 57/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  +V    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGP-------AHEI--GVKQVSHYLWNK 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G       +       S   + V  +I +             +F+  A  +A ++ I  
Sbjct: 231 YG-------SSAKVRFISVDFEPVVAEILEKVDDGQMGVILKRMFMRAAGMIAQKMKIEA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K +   LA++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIINLAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|262395022|ref|YP_003286876.1| thiamine biosynthesis protein ThiI [Vibrio sp. Ex25]
 gi|262338616|gb|ACY52411.1| thiamine biosynthesis protein ThiI [Vibrio sp. Ex25]
          Length = 465

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 57/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  +V    F+ G            +   + ++     + 
Sbjct: 163 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGP-------AHEI--GVKQVSHYLWNK 213

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G       +       S   + V  +I +             +F+  A  +A ++ I  
Sbjct: 214 YG-------SSAKVRFISVDFEPVVAEILEKVDDGQMGVILKRMFMRAAGMIAQKMKIEA 266

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K +   LA++IG +
Sbjct: 267 LVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIINLAREIGTE 317

Query: 191 DL 192
           D 
Sbjct: 318 DF 319


>gi|261838884|gb|ACX98649.1| argininosuccinate synthase [Helicobacter pylori 52]
          Length = 350

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +KK   AL LFSGG DS   +   +D+   V  L F+ G
Sbjct: 1  MKKI-KALALFSGGLDSLLSMKLLIDQGIEVSALHFNIG 38


>gi|261837468|gb|ACX97234.1| hypothetical protein KHP_0011 [Helicobacter pylori 51]
          Length = 350

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +KK   AL LFSGG DS   +   +D+   V  L F+ G
Sbjct: 1  MKKI-KALALFSGGLDSLLSMKLLIDQGIEVSALHFNIG 38


>gi|217034699|ref|ZP_03440102.1| hypothetical protein HP9810_880g10 [Helicobacter pylori 98-10]
 gi|216942839|gb|EEC22334.1| hypothetical protein HP9810_880g10 [Helicobacter pylori 98-10]
          Length = 350

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +KK   AL LFSGG DS   +   +D+   V  L F+ G
Sbjct: 1  MKKI-KALALFSGGLDSLLSMKLLIDQGIEVSALHFNIG 38


>gi|199597668|ref|ZP_03211096.1| Argininosuccinate synthase [Lactobacillus rhamnosus HN001]
 gi|258509812|ref|YP_003172563.1| argininosuccinate synthase [Lactobacillus rhamnosus GG]
 gi|199591475|gb|EDY99553.1| Argininosuccinate synthase [Lactobacillus rhamnosus HN001]
 gi|257149739|emb|CAR88712.1| Argininosuccinate synthase [Lactobacillus rhamnosus GG]
 gi|259651075|dbj|BAI43237.1| argininosuccinate synthase [Lactobacillus rhamnosus GG]
          Length = 406

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 20/175 (11%), Positives = 43/175 (24%), Gaps = 12/175 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                +L +SGG D+S  + W +D+   V  +  + GQ +      +    K        
Sbjct: 1   MTEKIVLAYSGGLDTSVAIPWLMDKGYEVIAVVLNVGQPDADFDAIQQKALK-------- 52

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +G    + +    + +   +   +                   + +     +A+  
Sbjct: 53  ----VGAIDSIVIDAQDEFADHYVAPVIKANALYEGDYPLVSALSRPLIIEHLVKIAHAQ 108

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
             T I  G                    E  I   +          +   K    
Sbjct: 109 NATAIAHGSTGKGNDQVRFEAAIHALDPEMKIEAPIRDFHWSREEEIDYAKDHHV 163


>gi|189501011|ref|YP_001960481.1| tRNA-specific 2-thiouridylase MnmA [Chlorobium phaeobacteroides
           BS1]
 gi|229486338|sp|B3EN11|MNMA_CHLPB RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|189496452|gb|ACE05000.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chlorobium phaeobacteroides BS1]
          Length = 359

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 48/190 (25%), Gaps = 13/190 (6%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           ++K     ++  SGG DS+      ++   RV  L           L+            
Sbjct: 1   MMKDKEHVIVGISGGVDSAVAACILIENGYRVTGLHI-------KVLDHSDDSLHLEKSP 53

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +           +  L  L       +             PN  +    +I        A
Sbjct: 54  LIISDRKEFRFPVFSLN-LSGSFRRDVIDYFLQDYLSGRTPNPCMVCNKLIKWKGLLKGA 112

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             L  T +  G       G   CR                 L  E       P+  L K 
Sbjct: 113 DLLQATLVATGHYARIDCGREKCRLLKGTDSQKDQSYFLWMLSSEELSKTLLPVGNLTKQ 172

Query: 179 ETWKLAQDIG 188
           E  +LA+  G
Sbjct: 173 EVRELARRFG 182


>gi|167628090|ref|YP_001678590.1| hypothetical protein Fphi_1863 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167598091|gb|ABZ88089.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 421

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 46/158 (29%), Gaps = 10/158 (6%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ---RNKVELECRLCVRKKI 60
           + KK   A+ L SGG DS       L++   VE ++F  G     +   +  +   ++K 
Sbjct: 1   MEKKQVKAVSLISGGLDSMLATKMMLEQGIHVEGINFFTGFCVEGHTHAIRKQDKEKQKR 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
              +   +    + HI+ +              +                  I  +  A 
Sbjct: 61  NNSLWVAEQLGIKLHIIDVI-------EEYKDVLLNPKYGYGANMNPCLDCKIFMVRKAK 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI 158
             A   G   I+ G                +   ++ +
Sbjct: 114 EWAEENGFDFIITGEVIGQRPMSQRKSTMPVVQKQSGV 151


>gi|91229459|ref|ZP_01262926.1| thiamine biosynthesis protein ThiI [Vibrio alginolyticus 12G01]
 gi|91187395|gb|EAS73749.1| thiamine biosynthesis protein ThiI [Vibrio alginolyticus 12G01]
          Length = 482

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 57/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  +V    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGP-------AHEI--GVKQVSHYLWNK 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G       +       S   + V  +I +             +F+  A  +A ++ I  
Sbjct: 231 YG-------SSAKVRFISVDFEPVVAEILEKVDDGQMGVILKRMFMRAAGMIAQKMKIEA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K +   LA++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIINLAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|254228601|ref|ZP_04922025.1| thiamine biosynthesis/tRNA modification protein ThiI [Vibrio sp.
           Ex25]
 gi|151938780|gb|EDN57614.1| thiamine biosynthesis/tRNA modification protein ThiI [Vibrio sp.
           Ex25]
          Length = 378

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 57/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  +V    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGP-------AHEI--GVKQVSHYLWNK 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G       +       S   + V  +I +             +F+  A  +A ++ I  
Sbjct: 231 YG-------SSAKVRFISVDFEPVVAEILEKVDDGQMGVILKRMFMRAAGMIAQKMKIEA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K +   LA++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIINLAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|126724597|ref|ZP_01740440.1| argininosuccinate synthase [Rhodobacterales bacterium HTCC2150]
 gi|126705761|gb|EBA04851.1| argininosuccinate synthase [Rhodobacterales bacterium HTCC2150]
          Length = 405

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 49/157 (31%), Gaps = 7/157 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W   +    V T + D GQ  ++E         +++  
Sbjct: 1   MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEPARAKA---EMMGA 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + + + E+ +            +      + +   ++    +  R +         A
Sbjct: 58  SEIFIEDVREEFVRDFVF---PMFRANAVYEGLYLLGTSIARPLISKRLVEIARQTGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         + + Y       + A     +L
Sbjct: 115 VAHGATGKGNDQVRFELAAYALDPDIKVIAPWRDWDL 151


>gi|319776300|ref|YP_004138788.1| thiamine biosynthesis ATP pyrophosphatase [Haemophilus influenzae
           F3047]
 gi|317450891|emb|CBY87116.1| predicted thiamine biosynthesis ATP pyrophosphatase [Haemophilus
           influenzae F3047]
          Length = 485

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 57/183 (31%), Gaps = 27/183 (14%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKWKD 69
            L L SGG DS       + R  RV    F+ G   +++ ++               W+ 
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGGTVHEIGVKQM---------AYHIWQR 230

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +AI  +     + + V        L    V   + +        A R  I 
Sbjct: 231 YSASHKVRFIAINFEGVVGEILEKVDNGQMGVVLKRMMVRAASKV--------AQRFNIE 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      S         I     A+         V  PL+   K +   +A++IG 
Sbjct: 283 AIVTGEALGQVSSQTLTNLRLIDEAADAL---------VLRPLITHDKEQIIAMAKEIGT 333

Query: 190 QDL 192
            D+
Sbjct: 334 DDI 336


>gi|289550612|ref|YP_003471516.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus lugdunensis HKU09-01]
 gi|315658107|ref|ZP_07910979.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus lugdunensis M23590]
 gi|289180144|gb|ADC87389.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus lugdunensis HKU09-01]
 gi|315496436|gb|EFU84759.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus lugdunensis M23590]
          Length = 370

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 51/191 (26%), Gaps = 11/191 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  K    ++  SGG DSS       ++   V  +             C     +   ++
Sbjct: 1   MSNKDIRVVVGMSGGVDSSVTAYLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDYNDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +          + +      +   + +      + +    PN  V     I        A
Sbjct: 59  IAVCNQIGIPYYAVN---FEEEYWNKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLEHA 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLKK 177
            +LG   +  G                               L  +    V  P+  ++K
Sbjct: 116 LKLGADYVATGHYARLKRYDDGHVEMLRGVDNNKDQTYFLNQLSQQQLSKVMFPIGDIEK 175

Query: 178 YETWKLAQDIG 188
            E  ++A++ G
Sbjct: 176 KEVRRIAEEQG 186


>gi|260576149|ref|ZP_05844142.1| argininosuccinate synthase [Rhodobacter sp. SW2]
 gi|259021629|gb|EEW24932.1| argininosuccinate synthase [Rhodobacter sp. SW2]
          Length = 409

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 50/157 (31%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W   +    V T + D GQ  ++E      V   I + 
Sbjct: 1   MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVMTFTADLGQGEELEPARAKAVLLGI-DP 59

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + + + E+ +            +      + +   ++    +  R +         A
Sbjct: 60  KNIYIEDVREEFVRDFVF---PMFRANALYEGLYLLGTSIARPLIAKRLVEIAALTGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         + + Y    H  + A     +L
Sbjct: 117 VAHGATGKGNDQVRFELTAYALNPHIRVIAPWREWDL 153


>gi|315231707|ref|YP_004072143.1| tRNA(U54)-2-thioribothymidine synthetase [Thermococcus barophilus
           MP]
 gi|315184735|gb|ADT84920.1| tRNA(U54)-2-thioribothymidine synthetase [Thermococcus barophilus
           MP]
          Length = 307

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 2/69 (2%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD--YGQRNKVELECRLCVRKK 59
             ++K+    L++ SGG+DS+            +E L  +   G+ +    E      + 
Sbjct: 41  YKLLKRDERILVVVSGGKDSAVVSYVLKKLGYNIECLYINLGIGEYSAKSEEYAKKQCEM 100

Query: 60  IVELMPKWK 68
           I   +   +
Sbjct: 101 INAKLHIVR 109


>gi|18977994|ref|NP_579351.1| n-type ATP pyrophosphatase superfamily protein [Pyrococcus
          furiosus DSM 3638]
 gi|18893773|gb|AAL81746.1| n-type ATP pyrophosphatase superfamily [Pyrococcus furiosus DSM
          3638]
          Length = 261

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
              L+L+SGG DSS  L        +V  L+F
Sbjct: 20 NKRVLVLYSGGIDSSVTLYVLKKAGFKVSALTF 52


>gi|114563950|ref|YP_751464.1| thiamine biosynthesis protein ThiI [Shewanella frigidimarina NCIMB
           400]
 gi|122299147|sp|Q07ZD9|THII_SHEFN RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|114335243|gb|ABI72625.1| thiamine biosynthesis/tRNA modification protein ThiI [Shewanella
           frigidimarina NCIMB 400]
          Length = 484

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 56/197 (28%), Gaps = 29/197 (14%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--QRNKVELECRLCVRKKIVE 62
           +      L L SGG DS       + +  R     F+ G  Q      +    + KK  E
Sbjct: 176 MATQEDVLSLISGGFDSGVSSFQFIKKGARTHYCFFNLGGAQHEIGVKQVAYHLWKKYGE 235

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                                    S   + V  +I +             + +  A  +
Sbjct: 236 SHKV------------------RFVSVPFEPVVEEILERIDNGQMGVVLKRVMMRAATRI 277

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A + GI  +V G      S       + I      +         +  PL+ + K +   
Sbjct: 278 ADKYGIQALVTGESLGQVSSQTLTNLNVIDRSTDLL---------ILRPLIAMDKQDIIN 328

Query: 183 LAQDIGGQDLVNLILEE 199
            ++ IG +D    I E 
Sbjct: 329 QSRIIGTEDFAKSIPEY 345


>gi|319897069|ref|YP_004135264.1| thiamine biosynthesis ATP pyrophosphatase [Haemophilus influenzae
           F3031]
 gi|317432573|emb|CBY80933.1| predicted thiamine biosynthesis ATP pyrophosphatase [Haemophilus
           influenzae F3031]
          Length = 485

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 57/183 (31%), Gaps = 27/183 (14%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKWKD 69
            L L SGG DS       + R  RV    F+ G   +++ ++               W+ 
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGGTVHEIGVKQM---------AYHIWQR 230

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +AI  +     + + V        L    V   + +        A R  I 
Sbjct: 231 YSASHKVRFIAINFEGVVGEILEKVDNGQMGVVLKRMMVRAASKV--------AQRFNIE 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      S         I     A+         V  PL+   K +   +A++IG 
Sbjct: 283 AIVTGEALGQVSSQTLTNLRLIDEAADAL---------VLRPLITHDKEQIIAMAKEIGT 333

Query: 190 QDL 192
            D+
Sbjct: 334 DDI 336


>gi|317008691|gb|ADU79271.1| hypothetical protein HPIN_00055 [Helicobacter pylori India7]
          Length = 350

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/37 (40%), Positives = 19/37 (51%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          K   AL LFSGG DS   +   +D+   V  L F+ G
Sbjct: 2  KPIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38


>gi|307189324|gb|EFN73755.1| GMP synthase [glutamine-hydrolyzing] [Camponotus floridanus]
          Length = 732

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 2/62 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              LLL SGG DS+ C +        ++V  L  + G   K E +       ++   +  
Sbjct: 239 KKVLLLVSGGVDSTVCAALLQKALNKEQVIALHINNGFMRKGETQFVEQCLAQLCVTLRV 298

Query: 67  WK 68
             
Sbjct: 299 VN 300


>gi|302035751|ref|YP_003796073.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Nitrospira defluvii]
 gi|300603815|emb|CBK40147.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Nitrospira defluvii]
          Length = 360

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 58/195 (29%), Gaps = 15/195 (7%)

Query: 7   KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLS-----FDYGQRNKVELECRLCVRKKI 60
            A   +LL  SGG DSS   S  + +   V  ++      +  Q    +         KI
Sbjct: 1   MARQTVLLGMSGGVDSSVAASLLVQQGYDVHGITLQVWEHEDDQIAVSKRWEERGCC-KI 59

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                  +       ++      ++    +  +          PN  V     + L    
Sbjct: 60  GIAKYVAQRLRIPYEVVDR---REVFQQGVIDDFVAGYASGTTPNPCVRCNERVKLRSLY 116

Query: 121 TLAYRLGITNIV--IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH---TPLMWL 175
            LA   G+ ++           +G            + +  L   +   +     P+  +
Sbjct: 117 ALAQERGMDHVATGHYARVQQVNGQWSLHRALDARKDQSYFLYRINPAWLPRLLFPVGHM 176

Query: 176 KKYETWKLAQDIGGQ 190
           +K + W+ A+ +G  
Sbjct: 177 QKCDVWQEAESLGLP 191


>gi|288930774|ref|YP_003434834.1| GMP synthase, large subunit [Ferroglobus placidus DSM 10642]
 gi|288893022|gb|ADC64559.1| GMP synthase, large subunit [Ferroglobus placidus DSM 10642]
          Length = 304

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 58/201 (28%), Gaps = 14/201 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A++  SGG DSS C   A     DR+  +  D G   + E E    V   +  +    +
Sbjct: 23  KAIIALSGGVDSSVCAVLAYKAIGDRLIPVFVDTGLMREGEPERVKEVFGHMNLVFIDAR 82

Query: 69  DSLGE-DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           D   +    +            L   +  K+ +       + G     ++ +        
Sbjct: 83  DEFFKALKGVTDPEEKRKIVGELFVRIFEKVAEEKGAEYLIQGTIYPDIIESQGGIKSHH 142

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------------VHTPLMWL 175
                    +      P          E A  LG+   ++                 +  
Sbjct: 143 NVGGFPTKYKFKKVIEPLRELYKDEVREIARYLGLPEEISERMPFPGPGLAVRVVGEVTP 202

Query: 176 KKYETWKLAQDIGGQDLVNLI 196
           +K E  + A  I  ++L ++ 
Sbjct: 203 EKVEIVRKATKIVEEELKDVP 223


>gi|218888208|ref|YP_002437529.1| GMP synthase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|226738437|sp|B8DNB9|GUAA_DESVM RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|218759162|gb|ACL10061.1| GMP synthase, large subunit [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 515

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 50/185 (27%), Gaps = 18/185 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+            R+  +  D G     E +              +  D
Sbjct: 221 VVCALSGGIDSTVVAVLLHKAIGKRLHCIFVDNGVLRLNEGQ--------------EVVD 266

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            L E   L L  +                +       +           A      L   
Sbjct: 267 YLREHFDLNLKYVQAQRRFLDKLEGVEDPEQKRKIIGYTFIEVFDEEAKALGHVDFLAQG 326

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   V E   S         I++      L  + ++ +  PL  L K E  K+A ++G 
Sbjct: 327 TLYPDVIE---SVSHKGPSAVIKSHHNVGGLPEKMNLKLIEPLRELFKDEVRKVAGELGL 383

Query: 190 QDLVN 194
            D + 
Sbjct: 384 PDFII 388


>gi|262306011|gb|ACY45598.1| gln amidotransferase [Argulus sp. Arg2]
          Length = 196

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K    ++L SGG DSS C +        ++V  +  D G   K E +        +   +
Sbjct: 42  KNNKVMVLLSGGVDSSVCAALLHKALSPEQVIAIHIDNGFMRKNESQQVFNSLSNLGINV 101

Query: 65  PKWKDS 70
                S
Sbjct: 102 HVINAS 107


>gi|220905738|ref|YP_002481049.1| GMP synthase [Cyanothece sp. PCC 7425]
 gi|219862349|gb|ACL42688.1| GMP synthase, large subunit [Cyanothece sp. PCC 7425]
          Length = 537

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 54/186 (29%), Gaps = 11/186 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST          +++  +  D G   K E E    + K   E     
Sbjct: 234 KRVLLALSGGVDSSTLAFLLYRAIGNQLTCMFIDQGFMRKNEPE---RLVKLFREQFHIP 290

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            + +         + G         +   K +        V       L     LA    
Sbjct: 291 VEYVNASERFLERLEG-------VTDPEEKRKRIGHEFIQVFEEESRRLGPFDYLAQGTL 343

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +++            +     I++      L  +    +  PL  L K E  K+ + +
Sbjct: 344 YPDVIESADTNVDPETGERVAVKIKSHHNVGGLPKDLRFKLVEPLRKLFKDEVRKVGRSL 403

Query: 188 GGQDLV 193
           G  + +
Sbjct: 404 GLPEEI 409


>gi|239825809|ref|YP_002948433.1| GMP synthase [Geobacillus sp. WCH70]
 gi|239806102|gb|ACS23167.1| GMP synthase, large subunit [Geobacillus sp. WCH70]
          Length = 512

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 57/186 (30%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 218 KKVLCALSGGVDSSVAAVLVHRAIGDQLTCIFVDHGLLRKGE---AESVMKTFRE----- 269

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    +      +   S L      + +   + N F+   +          A   G
Sbjct: 270 ----GFHMNVIKVDAKERFLSKLKGVTDPEQKRKIIGNEFIYVFDDEA-------AKLEG 318

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +V G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 319 IEFLVQGTLYTDIIESGTATAQTIKSHHNVGGLPEDMKFKLIEPLNTLFKDEVRALGTEL 378

Query: 188 GGQDLV 193
           G  D +
Sbjct: 379 GLPDEI 384


>gi|124024748|ref|YP_001013864.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Prochlorococcus marinus str. NATL1A]
 gi|226739660|sp|A2BZD9|GUAA_PROM1 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|123959816|gb|ABM74599.1| Glutamine amidotransferase class-I:GMP synthase [Prochlorococcus
           marinus str. NATL1A]
          Length = 528

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 48/190 (25%), Gaps = 19/190 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST           ++  +  D G   K E E                
Sbjct: 225 KKVLLALSGGVDSSTLAFLLNKAIGPQLTCMFIDQGFMRKGEPEF--------------L 270

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                E   + +  +                +           R              L 
Sbjct: 271 MSFFDEKFKINVEYINARERFISQLKGVTDPEQKRKIIGREFIRVFEEESLRLGPFDYLA 330

Query: 128 ITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              +   V E+  +       +     I++      L  +    +  PL  L K E  K+
Sbjct: 331 QGTLYPDVIESSGTNIDPKTGERIAVKIKSHHNVGGLPKDLQFKLVEPLRRLFKDEVRKV 390

Query: 184 AQDIGGQDLV 193
            + +G  D +
Sbjct: 391 GKSLGLPDEI 400


>gi|194468395|ref|ZP_03074381.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus reuteri 100-23]
 gi|194453248|gb|EDX42146.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus reuteri 100-23]
          Length = 377

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 48/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS        +   V  +             C     +  
Sbjct: 1   MAD--NSHTRVVVGMSGGVDSSVTALLLKRQGYDVVGVFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + K    + +    PN  V     I      
Sbjct: 57  KDVAKVASKIGIPYYSVN---FEKEYWDRVFKYFIAEYKKGRTPNPDVICNKEIKFKAFI 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A +LG   +  G             H      +          L  +    V  PL  
Sbjct: 114 EYANQLGADYVATGHYADVKRDENGRMHLMRAKDQHKDQTYFLSQLDYKQLDKVMFPLAG 173

Query: 175 LKKYETWKLAQDIG 188
             K E  K+A++ G
Sbjct: 174 YTKPEIRKIAEEAG 187


>gi|72383200|ref|YP_292555.1| GMP synthase [Prochlorococcus marinus str. NATL2A]
 gi|91206818|sp|Q46I26|GUAA_PROMT RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|72003050|gb|AAZ58852.1| GMP synthase (glutamine-hydrolyzing) [Prochlorococcus marinus str.
           NATL2A]
          Length = 528

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 48/190 (25%), Gaps = 19/190 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST           ++  +  D G   K E E                
Sbjct: 225 KKVLLALSGGVDSSTLAFLLNKAIGPQLTCMFIDQGFMRKGEPEF--------------L 270

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                E   + +  +                +           R              L 
Sbjct: 271 MSFFDEKFKINVEYINARERFISQLKGVTDPEQKRKIIGREFIRVFEEESLRLGPFDYLA 330

Query: 128 ITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              +   V E+  +       +     I++      L  +    +  PL  L K E  K+
Sbjct: 331 QGTLYPDVIESSGTNIDPKTGERIAVKIKSHHNVGGLPKDLQFKLVEPLRRLFKDEVRKV 390

Query: 184 AQDIGGQDLV 193
            + +G  D +
Sbjct: 391 GKSLGLPDEI 400


>gi|194878400|ref|XP_001974055.1| GG21516 [Drosophila erecta]
 gi|190657242|gb|EDV54455.1| GG21516 [Drosophila erecta]
          Length = 677

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 55/194 (28%), Gaps = 8/194 (4%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIV-ELM 64
               LLL SGG DSS C +         ++  +  D G   K E E      + I  +L+
Sbjct: 228 NNKVLLLVSGGVDSSVCAALLRRALYPNQIIAVHVDNGFMRKNESEKVERSLRDIGIDLI 287

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP---NTFVPGRNIIFLVFAAT 121
            + +          +   G  S             +       + FV   N +       
Sbjct: 288 VRKEGYTFLKGTTQVKRPGQYSVVETPMLCQTYNPEEKRKIIGDIFVKVTNDVVAELKLK 347

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYE 179
               +     +        S       +TI+      +L  E      V  PL    K E
Sbjct: 348 PEEVMLAQGTLRPDLIESASNMVSTNAETIKTHHNDTDLIRELRNAGRVVEPLCDFHKDE 407

Query: 180 TWKLAQDIGGQDLV 193
              L  D+G    +
Sbjct: 408 VRDLGNDLGLPQEL 421


>gi|91085987|ref|XP_972131.1| PREDICTED: similar to tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Tribolium castaneum]
          Length = 417

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 52/197 (26%), Gaps = 17/197 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      ++  SGG DS+        R   ++ +          +  C      K   L+
Sbjct: 1   MLNIRKVVVGISGGVDSAVAALLLKKRGYDIQGVFMQNWDIADEKGYCSADADYKDAALV 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
               D         +  +    +   +  +      N      +  RNI F  F      
Sbjct: 61  CDKLDIKLTH----VNFVKHYWNEVFSNLIKEYETGNTPNPDVLCNRNIKFNYFYKYARN 116

Query: 125 RLGITNIVIGVCETDYSGYPDCRHD-------------TIRAIETAINLGMESHVTVHTP 171
            LG   I  G       G     ++                       +  E+      P
Sbjct: 117 ELGADAIATGHYARTSFGSYLEHYNPEKGVRLLNAVDWFKDQTFFLCQVNQEALQRTMFP 176

Query: 172 LMWLKKYETWKLAQDIG 188
           L  L K E  K+A++ G
Sbjct: 177 LGDLMKPEVKKIARENG 193


>gi|318075485|ref|ZP_07982817.1| GMP synthase [Streptomyces sp. SA3_actF]
 gi|333026600|ref|ZP_08454664.1| putative GMP synthase [Streptomyces sp. Tu6071]
 gi|332746452|gb|EGJ76893.1| putative GMP synthase [Streptomyces sp. Tu6071]
          Length = 529

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/187 (11%), Positives = 51/187 (27%), Gaps = 11/187 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              A+   SGG DS+   +        ++  +  D+G   K E E               
Sbjct: 224 TKRAICGLSGGVDSAVAAALVQRAIGSQLTCVYVDHGLMRKGETEQVEK---------DF 274

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +  +  ++  A     + + ++     +                  +   A     +
Sbjct: 275 VAATGVQLKVVDAADRFLDALAGVSDPEQKRKIIGREFIRVFEQAQAEIVAENAADGADV 334

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +               I++      L  +    +  PL  L K E   + Q+
Sbjct: 335 -AFLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPEDLEFELIEPLRKLFKDEVRAVGQE 393

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 394 LGLPEEI 400


>gi|318058801|ref|ZP_07977524.1| GMP synthase [Streptomyces sp. SA3_actG]
          Length = 527

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/187 (11%), Positives = 51/187 (27%), Gaps = 11/187 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              A+   SGG DS+   +        ++  +  D+G   K E E               
Sbjct: 222 TKRAICGLSGGVDSAVAAALVQRAIGSQLTCVYVDHGLMRKGETEQVEK---------DF 272

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +  +  ++  A     + + ++     +                  +   A     +
Sbjct: 273 VAATGVQLKVVDAADRFLDALAGVSDPEQKRKIIGREFIRVFEQAQAEIVAENAADGADV 332

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +               I++      L  +    +  PL  L K E   + Q+
Sbjct: 333 -AFLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPEDLEFELIEPLRKLFKDEVRAVGQE 391

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 392 LGLPEEI 398


>gi|302519571|ref|ZP_07271913.1| GMP synthase domain-containing protein [Streptomyces sp. SPB78]
 gi|302428466|gb|EFL00282.1| GMP synthase domain-containing protein [Streptomyces sp. SPB78]
          Length = 527

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/187 (11%), Positives = 51/187 (27%), Gaps = 11/187 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              A+   SGG DS+   +        ++  +  D+G   K E E               
Sbjct: 222 TKRAICGLSGGVDSAVAAALVQRAIGSQLTCVYVDHGLMRKGETEQVEK---------DF 272

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +  +  ++  A     + + ++     +                  +   A     +
Sbjct: 273 VAATGVQLKVVDAADRFLDALAGVSDPEQKRKIIGREFIRVFEQAQAEIVAENAADGADV 332

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +               I++      L  +    +  PL  L K E   + Q+
Sbjct: 333 -AFLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPEDLEFELIEPLRKLFKDEVRAVGQE 391

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 392 LGLPEEI 398


>gi|237753391|ref|ZP_04583871.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Helicobacter winghamensis ATCC BAA-430]
 gi|229375658|gb|EEO25749.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Helicobacter winghamensis ATCC BAA-430]
          Length = 347

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 21/65 (32%), Gaps = 3/65 (4%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIVELMP 65
             LLL SGG DSS C      +   V  +     D  +++   +       K +     
Sbjct: 2  KKVLLLMSGGVDSSYCAYLLQKQGYLVYGVYLKLHDKEEKHAYFVRNIEKCAKHLNIEYS 61

Query: 66 KWKDS 70
             + 
Sbjct: 62 IIDER 66


>gi|254486957|ref|ZP_05100162.1| argininosuccinate synthase [Roseobacter sp. GAI101]
 gi|214043826|gb|EEB84464.1| argininosuccinate synthase [Roseobacter sp. GAI101]
          Length = 406

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 49/157 (31%), Gaps = 7/157 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W   +    V T + D GQ  ++E         +++  
Sbjct: 1   MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEPARAKA---EMMGA 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + + + E+ +            +      + +   ++    +  R +         A
Sbjct: 58  SEIYIEDVREEFVRDFVF---PMFRANALYEGLYLLGTSIARPLISKRLVEIAAETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         + + Y       + A     +L
Sbjct: 115 VAHGATGKGNDQVRFELAAYALNPDIKVIAPWREWDL 151


>gi|254464002|ref|ZP_05077413.1| argininosuccinate synthase [Rhodobacterales bacterium Y4I]
 gi|206684910|gb|EDZ45392.1| argininosuccinate synthase [Rhodobacterales bacterium Y4I]
          Length = 408

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 44/157 (28%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W   +    V T + D GQ  ++E        + +   
Sbjct: 1   MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEP--ARKKAEMLGIK 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                     +  +           +      + +   ++    +  R +         A
Sbjct: 59  PENIFIEDVREEFV--RDFVFPMFRANAVYEGLYLLGTSIARPLISKRLVEIAEATGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         + + Y       + A     +L
Sbjct: 117 VAHGATGKGNDQVRFELAAYALNPDIKVIAPWREWDL 153


>gi|325995283|gb|ADZ50688.1| tRNA-5-methylaminomethyl-2-thiouridylate-methyltransferase
          [Helicobacter pylori 2018]
          Length = 350

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
           AL LFSGG DS   +   +D+   V  L F+ G
Sbjct: 5  KALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38


>gi|317013437|gb|ADU80873.1| hypothetical protein HPGAM_00065 [Helicobacter pylori
          Gambia94/24]
          Length = 350

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
           AL LFSGG DS   +   +D+   V  L F+ G
Sbjct: 5  KALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38


>gi|317011869|gb|ADU82477.1| hypothetical protein HPLT_00060 [Helicobacter pylori Lithuania75]
          Length = 350

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
           AL LFSGG DS   +   +D+   V  L F+ G
Sbjct: 5  KALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38


>gi|307636697|gb|ADN79147.1| tRNA-5-methylaminomethyl-2-thiouridylate-methyltransferase
          [Helicobacter pylori 908]
          Length = 350

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
           AL LFSGG DS   +   +D+   V  L F+ G
Sbjct: 5  KALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38


>gi|302686048|ref|XP_003032704.1| argininosuccinate synthetase [Schizophyllum commune H4-8]
 gi|300106398|gb|EFI97801.1| argininosuccinate synthetase [Schizophyllum commune H4-8]
          Length = 426

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 2/59 (3%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          +       L+ +SGG D+S  L+W +++   V     D GQ  + +         K+  
Sbjct: 1  MSAPKGRVLIAYSGGLDTSCILAWLIEQGYEVYAFMADVGQ--EEDFAAAEKKALKVGA 57


>gi|227544860|ref|ZP_03974909.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus reuteri CF48-3A]
 gi|300909920|ref|ZP_07127380.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus reuteri SD2112]
 gi|227185134|gb|EEI65205.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus reuteri CF48-3A]
 gi|300892568|gb|EFK85928.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus reuteri SD2112]
          Length = 377

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 48/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS        +   V  +             C     +  
Sbjct: 1   MAD--NSHTRVVVGMSGGVDSSVTALLLKRQGYDVVGVFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + K    + +    PN  V     I      
Sbjct: 57  KDVAKVASKIGIPYYSVN---FEKEYWDRVFKYFIAEYKKGRTPNPDVICNKEIKFKAFI 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A +LG   +  G             H      +          L  +    V  PL  
Sbjct: 114 EYANQLGADYVATGHYADVKRDENGRMHLMRAKDQHKDQTYFLSQLDYKQLDKVMFPLAG 173

Query: 175 LKKYETWKLAQDIG 188
             K E  K+A++ G
Sbjct: 174 YTKPEIRKIAEEAG 187


>gi|254510416|ref|ZP_05122483.1| argininosuccinate synthase [Rhodobacteraceae bacterium KLH11]
 gi|221534127|gb|EEE37115.1| argininosuccinate synthase [Rhodobacteraceae bacterium KLH11]
          Length = 407

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/158 (13%), Positives = 46/158 (29%), Gaps = 5/158 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W   +    V T + D GQ  ++E        + +   
Sbjct: 1   MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEP--ARKKAELLGIK 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +         +      + +   ++    +  R +         A
Sbjct: 59  PENI--YIEDIREEFVRDFVFPMFRANAVYEGLYLLGTSIARPLISKRLVEIAEATGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
              G T         + + Y    +  + A     +L 
Sbjct: 117 VAHGATGKGNDQVRFELAAYALNPNIKVIAPWREWDLS 154


>gi|156365939|ref|XP_001626899.1| predicted protein [Nematostella vectensis]
 gi|156213792|gb|EDO34799.1| predicted protein [Nematostella vectensis]
          Length = 701

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 22/61 (36%), Gaps = 2/61 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        DRV  +  D G   K E        K +   +   
Sbjct: 246 KVLVLVSGGVDSTVCAALLHKALGPDRVVAVHIDNGFMRKQESMQVEESLKCLGLRLKVL 305

Query: 68  K 68
            
Sbjct: 306 N 306


>gi|15611082|ref|NP_222733.1| hypothetical protein jhp0011 [Helicobacter pylori J99]
 gi|4154513|gb|AAD05593.1| putative [Helicobacter pylori J99]
          Length = 350

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
           AL LFSGG DS   +   +D+   V  L F+ G
Sbjct: 5  KALALFSGGLDSLLSMKLLIDQGIEVTALHFNIG 38


>gi|282860894|ref|ZP_06269960.1| GMP synthase, large subunit [Streptomyces sp. ACTE]
 gi|282564630|gb|EFB70166.1| GMP synthase, large subunit [Streptomyces sp. ACTE]
          Length = 530

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 56/187 (29%), Gaps = 12/187 (6%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              A+   SGG DS+   +        ++  +  D+G   K E E          ++   
Sbjct: 226 TKRAICGLSGGVDSAVAAALVQKAIGSQLTCVYVDHGLMRKGETE----------QVEKD 275

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  + G    +  A    +   +   +   K +        V  +    +V  A     +
Sbjct: 276 FVAATGVQLKVVDAEKRFLDALAGVSDPEQKRKIIGREFIRVFEQAQAEIVAEAAEGEDV 335

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +               I++      L  +    +  PL  L K E   + Q+
Sbjct: 336 -AFLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPEDIEFQLVEPLRQLFKDEVRMVGQE 394

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 395 LGLPEEI 401


>gi|56478329|ref|YP_159918.1| argininosuccinate synthase [Aromatoleum aromaticum EbN1]
 gi|61211396|sp|Q5P0Z7|ASSY_AZOSE RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|56314372|emb|CAI09017.1| Argininosuccinate synthase [Aromatoleum aromaticum EbN1]
          Length = 409

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 50/157 (31%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +     A+L +SGG D+S  L W  D +   V T + D GQ  ++E   R    K  ++ 
Sbjct: 1   MSDVKKAVLAYSGGLDTSVILKWLQDTYQCEVVTFTADLGQGEELEP-ARQKALKFGIKP 59

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + D L E+ +              T      +   ++    +  R I         A
Sbjct: 60  DNIFIDDLREEFVRDFVF---PMFRCNTVYEGEYLLGTSIARPLIAKRQIEIARATGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         +   Y       + A     +L
Sbjct: 117 VSHGATGKGNDQVRFELGYYALMPGVKVIAPWREWDL 153


>gi|207721599|ref|YP_002252038.1| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           protein [Ralstonia solanacearum MolK2]
 gi|206586760|emb|CAQ17345.1| probable trna
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           protein [Ralstonia solanacearum MolK2]
          Length = 370

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 46/188 (24%), Gaps = 10/188 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS        +   V  L     + +     C     +  ++++    
Sbjct: 4   KRVVVGLSGGVDSSVTAWLLKQQGYEVVGLFMKNWEDDDDSEYCSTR--QDWIDVVSVAD 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               +   +            +  +   +      PN  V     I        A  LG 
Sbjct: 62  LIGVD---VEAVNFAAEYKDRVFADFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMALGA 118

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             I  G                    T         L          PL  + K    ++
Sbjct: 119 DTIATGHYARVREVDGRFELLKAFDHTKDQSYFLHRLNQAQLSRTLFPLGEIPKTRVREI 178

Query: 184 AQDIGGQD 191
           A +IG  +
Sbjct: 179 AAEIGLPN 186


>gi|46447434|ref|YP_008799.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase/
           antisuppressor [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|81626468|sp|Q6MA75|MNMA_PARUW RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|46401075|emb|CAF24524.1| probable tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase/
           Antisuppressor [Candidatus Protochlamydia amoebophila
           UWE25]
          Length = 376

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/189 (12%), Positives = 47/189 (24%), Gaps = 11/189 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +K   + ++  SGG DSS       ++   V  L        + +        +   ++ 
Sbjct: 1   MKNQKTVVVGMSGGVDSSVSALLMKEQGYNVIGLFMK--NWEEKDENGVCSSAQDYDDVR 58

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     + +      +     +        Q    PN  +     I        A 
Sbjct: 59  RVCDHINIPYYAVN---FVENYRKQVFTQFIADFQKGWTPNPDILCNREIKFKVFLEKAL 115

Query: 125 RLGITNIVIGVCETDYSGYPDCR------HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            LG   +  G    +                          L  +    V  P+  L+K 
Sbjct: 116 ELGADFLATGHYCQNLILDKGSPSLVKGIDHNKDQTYFLYTLNQQILQQVLFPVGGLEKS 175

Query: 179 ETWKLAQDI 187
           +   +A+  
Sbjct: 176 QVRDIARKH 184


>gi|332705642|ref|ZP_08425718.1| 5-methylaminomethyl-2-thiouridylate tRNA methyltransferase [Lyngbya
           majuscula 3L]
 gi|332355434|gb|EGJ34898.1| 5-methylaminomethyl-2-thiouridylate tRNA methyltransferase [Lyngbya
           majuscula 3L]
          Length = 362

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/146 (15%), Positives = 42/146 (28%), Gaps = 10/146 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS   +    +   V  L+        +      C  + +V+     +
Sbjct: 2   NKVVVGLSGGVDSSVAAATLYHKGYEVVGLTL------WLMKGKGQCCSEGMVDAAFICE 55

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR-LG 127
                 HI+    +   +      +     Q    P         +      + A++ LG
Sbjct: 56  QLGIPHHIVDSRDVFQENIVDYLVS---GYQSGITPLPCSQCNKAVKFGPMLSYAHQTLG 112

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRA 153
           I  I  G            R+   RA
Sbjct: 113 IDKIATGHYARITYDAECDRYQLRRA 138


>gi|294777621|ref|ZP_06743072.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides vulgatus PC510]
 gi|294448689|gb|EFG17238.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides vulgatus PC510]
          Length = 351

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/192 (11%), Positives = 49/192 (25%), Gaps = 15/192 (7%)

Query: 1   MNDIIKKAPSALLLF--SGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCV 56
           M +         +L   SGG DSS       D    V  ++F + ++       E    +
Sbjct: 1   MRETESNNK---VLLGMSGGTDSSVAALLLQDAGYEVTGITFRFYEKENDTEYLEDARAL 57

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
            +++      +         +    + +      T        +           + + +
Sbjct: 58  CERLNIPHLTYDVRDTFRKTIIDYFINEYMAG-HTPVPCTLCNNYLKWPLLKKISDEMGI 116

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
              AT  Y             T      D         +  +         +  P+  L 
Sbjct: 117 YHFATGHYVRRRFINGCYHITTGADPDKDQSFFLWGLPQEILQ-------RMLLPMGNLT 169

Query: 177 KYETWKLAQDIG 188
           K    ++A + G
Sbjct: 170 KARVREIAAERG 181


>gi|254881202|ref|ZP_05253912.1| tRNA-specific 2-thiouridylase mnmA 2 [Bacteroides sp. 4_3_47FAA]
 gi|319640212|ref|ZP_07994938.1| tRNA-specific 2-thiouridylase mnmA 2 [Bacteroides sp. 3_1_40A]
 gi|254833995|gb|EET14304.1| tRNA-specific 2-thiouridylase mnmA 2 [Bacteroides sp. 4_3_47FAA]
 gi|317388199|gb|EFV69052.1| tRNA-specific 2-thiouridylase mnmA 2 [Bacteroides sp. 3_1_40A]
          Length = 351

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/192 (11%), Positives = 49/192 (25%), Gaps = 15/192 (7%)

Query: 1   MNDIIKKAPSALLLF--SGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCV 56
           M +         +L   SGG DSS       D    V  ++F + ++       E    +
Sbjct: 1   MRETESNNK---VLLGMSGGTDSSVAALLLQDAGYEVTGITFRFYEKENDTEYLEDARAL 57

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
            +++      +         +    + +      T        +           + + +
Sbjct: 58  CERLNIPHLTYDVRDTFRKTIIDYFINEYMAG-HTPVPCTLCNNYLKWPLLKKISDEMGI 116

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
              AT  Y             T      D         +  +         +  P+  L 
Sbjct: 117 YHFATGHYVRRRFINGCYHITTGADSDKDQSFFLWGLPQEILQ-------RMLLPMGNLT 169

Query: 177 KYETWKLAQDIG 188
           K    ++A + G
Sbjct: 170 KARVREIAAERG 181


>gi|296822020|ref|XP_002850217.1| argininosuccinate synthetase [Arthroderma otae CBS 113480]
 gi|238837771|gb|EEQ27433.1| argininosuccinate synthetase [Arthroderma otae CBS 113480]
          Length = 412

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 46/154 (29%), Gaps = 11/154 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      LL +SGG D+S  L+W L++   V     D GQ    + +        +    
Sbjct: 1   MAPQEKVLLAYSGGLDTSCILAWLLEQGHEVVCFLADVGQ--AEDFKEAERKALAVGA-K 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL-A 123
               + L ++ +  L       +       A+      L    V  R ++ +       A
Sbjct: 58  KLVVEDLKKEFVEDLCFKAIQCN-------AIWEDRYLLGARPVIARAMMRVAQQEGCTA 110

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA 157
              G T         + + Y       + A    
Sbjct: 111 VSHGCTGKGNDQVRFELAFYAIQPSINVIAPWRM 144


>gi|167045738|gb|ABZ10385.1| putative arginosuccinate synthase [uncultured marine bacterium
           HF4000_APKG2098]
          Length = 395

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 55/190 (28%), Gaps = 12/190 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +K+    +L +SGG D+S  L W  + +   V T + D GQ+        +   KK+   
Sbjct: 1   MKEKRKVVLAYSGGLDTSIILKWLQENYNVEVITYTADIGQKINKNKI--IDNAKKLGA- 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                ++L +  +          H    +   + +   ++    +  R I         A
Sbjct: 58  KKIIIENLRDIFVRDYVFPMIRGH---AQYEGIYLLGTSIARPLIAKRQIAIAKKLKAFA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              G T+        +   Y       I A          + +  +       K E    
Sbjct: 115 VSHGATDKGNDQVRFELCYYYFGPKIKIIAPWREWKFSSRTDLINYAK-----KKEILIP 169

Query: 184 AQDIGGQDLV 193
               G     
Sbjct: 170 KDKKGAPPFS 179


>gi|224418410|ref|ZP_03656416.1| tRNA methyltransferase [Helicobacter canadensis MIT 98-5491]
 gi|253827728|ref|ZP_04870613.1| tRNA methyltransferase [Helicobacter canadensis MIT 98-5491]
 gi|313141940|ref|ZP_07804133.1| tRNA methyltransferase [Helicobacter canadensis MIT 98-5491]
 gi|253511134|gb|EES89793.1| tRNA methyltransferase [Helicobacter canadensis MIT 98-5491]
 gi|313130971|gb|EFR48588.1| tRNA methyltransferase [Helicobacter canadensis MIT 98-5491]
          Length = 325

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 32/123 (26%), Gaps = 15/123 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL LFSGG DS   +    D    V  L FD G   K +    L               
Sbjct: 2   KALALFSGGLDSLLAIKIIKDMGIEVLALHFDIGFIGKNDKSEALKA---------ILSQ 52

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 ++ +            + +                 +      A ++    G +
Sbjct: 53  IDVPLKVVDI------KRQFFNEVLFEPKYGYGKYFNPCIDCHGNMFSHAFSMLESEGAS 106

Query: 130 NIV 132
            ++
Sbjct: 107 FVI 109


>gi|149191104|ref|ZP_01869363.1| thiamine biosynthesis protein ThiI [Vibrio shilonii AK1]
 gi|148835032|gb|EDL52010.1| thiamine biosynthesis protein ThiI [Vibrio shilonii AK1]
          Length = 482

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  +     F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKTHYCFFNLGGP-------AHEI--GVKQVAHYLWNK 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G       +       S   + V  +I +             +F+     LA + GI  
Sbjct: 231 YG-------SSAKVKFISVDFEPVVAEILEKVEDGQMGVILKRMFMRVGGMLAEKFGIEA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K +   LA++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRHIDGVTDTL---------ILRPLINWDKEDIIDLAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|148543839|ref|YP_001271209.1| tRNA-specific 2-thiouridylase MnmA [Lactobacillus reuteri DSM
           20016]
 gi|184153240|ref|YP_001841581.1| tRNA-specific 2-thiouridylase MnmA [Lactobacillus reuteri JCM 1112]
 gi|227364743|ref|ZP_03848792.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus reuteri MM2-3]
 gi|325682630|ref|ZP_08162147.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus reuteri MM4-1A]
 gi|166991123|sp|A5VJ48|MNMA_LACRD RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|229486414|sp|B2G6L9|MNMA_LACRJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|148530873|gb|ABQ82872.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus reuteri DSM 20016]
 gi|183224584|dbj|BAG25101.1| tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Lactobacillus reuteri JCM 1112]
 gi|227070202|gb|EEI08576.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus reuteri MM2-3]
 gi|324978469|gb|EGC15419.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus reuteri MM4-1A]
          Length = 377

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 48/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS        +   V  +             C     +  
Sbjct: 1   MAD--NSHTRVVVGMSGGVDSSVTALLLKRQGYDVVGVFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + K    + +    PN  V     I      
Sbjct: 57  KDVAKVASKIGIPYYSVN---FEKEYWDRVFKYFIAEYKKGRTPNPDVICNKEIKFKAFI 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A +LG   +  G             H      +          L  +    V  PL  
Sbjct: 114 EYANQLGADYVATGHYADVKRDENGRMHLMRAKDQHKDQTYFLSQLDYKQLDKVMFPLAG 173

Query: 175 LKKYETWKLAQDIG 188
             K E  K+A++ G
Sbjct: 174 YTKPEIRKIAEEAG 187


>gi|121997522|ref|YP_001002309.1| argininosuccinate synthase [Halorhodospira halophila SL1]
 gi|166219970|sp|A1WUZ5|ASSY_HALHL RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|121588927|gb|ABM61507.1| argininosuccinate synthase [Halorhodospira halophila SL1]
          Length = 403

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/210 (12%), Positives = 58/210 (27%), Gaps = 22/210 (10%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  +     V T + D GQ  ++E        ++  E 
Sbjct: 1   MSDVKKVVLAYSGGLDTSVILKWLEETYGCEVVTFTADLGQGEELEP------ARRKAEA 54

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
               +  + +               +        +   ++    +  R +         A
Sbjct: 55  FGIREIYVDDLREEFARDFVFPMFRANAVYEGEYLLGTSIARPLIAKRQVEIARETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              G T         +   Y       + A     +L     +  +     +      + 
Sbjct: 115 VAHGATGKGNDQVRFELGYYGLEPGIKVIAPWREWDLNSRERLLQYAERHGID----IEG 170

Query: 184 AQDIGGQDLVNL-----------ILEESHT 202
            ++ GG                 +LE++ T
Sbjct: 171 KREEGGAPYSMDANLLHISYEGGVLEDTWT 200


>gi|326796754|ref|YP_004314574.1| tRNA sulfurtransferase [Marinomonas mediterranea MMB-1]
 gi|326547518|gb|ADZ92738.1| tRNA sulfurtransferase [Marinomonas mediterranea MMB-1]
          Length = 483

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 55/185 (29%), Gaps = 25/185 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             S L L SGG DS+      + R  +     F+ G            +   + ++    
Sbjct: 177 QDSVLSLISGGFDSTVSSYLTMSRGLKTHFCFFNLGGD-------AHEI--GVKQVSHFL 227

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D  G       + +     +   +NV  +I      +        + L  A+ +   L 
Sbjct: 228 WDKYG-------SNINVKFVTVPFENVVAEILTKVDNSEMGVILKRMMLRAASEVMEGLN 280

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G      S         I  +   +         V  PL+ + K +    A +I
Sbjct: 281 AKALVTGESVAQVSSQTLINLQVIDQVTDNL---------VIRPLVTMNKQDIIDKAIEI 331

Query: 188 GGQDL 192
           G +  
Sbjct: 332 GTEPF 336


>gi|156973488|ref|YP_001444395.1| thiamine biosynthesis protein ThiI [Vibrio harveyi ATCC BAA-1116]
 gi|189030671|sp|A7MYC5|THII_VIBHB RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|156525082|gb|ABU70168.1| hypothetical protein VIBHAR_01178 [Vibrio harveyi ATCC BAA-1116]
          Length = 482

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 57/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  +V    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGP-------AHEI--GVKQVSHYLWNK 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G       +       S   + V  +I +             +F+  A  +A ++ I  
Sbjct: 231 YG-------SSAKVRFISVDFEPVVAEILEKVDDGQMGVILKRMFMRAAGMIAQKMKIEA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K +   LA++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIVNLAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|91216303|ref|ZP_01253270.1| argininosuccinate synthase [Psychroflexus torquis ATCC 700755]
 gi|91185441|gb|EAS71817.1| argininosuccinate synthase [Psychroflexus torquis ATCC 700755]
          Length = 394

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 44/175 (25%), Gaps = 11/175 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++ +SGG D+S C          V  +S + G     E++       K+     +  
Sbjct: 2   KKLVIAYSGGLDTSYCAVSLSKAGYEVHAVSVNTGGFTSEEIKKIEAKALKMGVATYQ-- 59

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                     +  +       +   +   +  NN     V    II  +     A  +  
Sbjct: 60  ---------NIDAIQSYYQKVIKYLIYGNVLKNNTYPLSVSAERIIQAIEIVQYAKSINA 110

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             I  G                  A E  I   +          +   K    ++
Sbjct: 111 QYIAHGSTGAGNDQVRFDMIFQTLAPEIEIITPIRDGKLTRQEEIDYLKSNGIEM 165


>gi|78485834|ref|YP_391759.1| thiamine biosynthesis protein ThiI [Thiomicrospira crunogena XCL-2]
 gi|78364120|gb|ABB42085.1| Thiamine biosynthesis protein thiI [Thiomicrospira crunogena XCL-2]
          Length = 478

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 54/182 (29%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS+      + R  +   + F+ G            +  K V     W+  
Sbjct: 179 VLSLMSGGFDSTVASYLTIKRGLKTHFIFFNLGG-------AAHEIGVKQVAFY-LWEQF 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +           +   + V  +I  +   +        + L  A  +A + GI  
Sbjct: 231 SASHRV--------EFITVPFEEVVAEIFRSTHESYMGVTLKRLMLQAAEEIADQKGIDA 282

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   + L   S          + K +   +A  IG +
Sbjct: 283 LVTGESVAQVSSQTLRNLALIDQVTNKLVLRPLSV---------MSKPDIMAIADQIGTR 333

Query: 191 DL 192
           + 
Sbjct: 334 EF 335


>gi|238894182|ref|YP_002918916.1| tRNA-specific 2-thiouridylase MnmA [Klebsiella pneumoniae
           NTUH-K2044]
 gi|238546498|dbj|BAH62849.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 388

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 52/189 (27%), Gaps = 9/189 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +     ++  SGG DSS      L +  +V  L     + +  E  C       + + 
Sbjct: 21  MSESQKKVIVGMSGGVDSSVSAYLLLQQGYKVGGLFMKNWEEDDGEEYC--TAAADLADA 78

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E H +      +   +     +             +  + I F  F    A
Sbjct: 79  QAVCDKLGIELHTVN--FAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAA 136

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G            +                 L  E       P+  L+K 
Sbjct: 137 EDLGADYIATGHYVRRADVDGKSQLLRGLDGNKDQSYFLYTLSHEQIAQSLFPVGELEKP 196

Query: 179 ETWKLAQDI 187
           +  K+A+++
Sbjct: 197 QVRKIAEEL 205


>gi|300933436|ref|ZP_07148692.1| argininosuccinate synthase [Corynebacterium resistens DSM 45100]
          Length = 398

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 1/51 (1%)

Query: 7  KAPSALLLFSGGQDSSTC-LSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
               +L +SGG D++      A +R   V  +S D GQ  +     R   
Sbjct: 1  MKDRVVLAYSGGLDTTVAISWIAKERNAEVVAVSIDLGQGGEDMETVRQRA 51


>gi|239827834|ref|YP_002950458.1| tRNA-specific 2-thiouridylase MnmA [Geobacillus sp. WCH70]
 gi|239808127|gb|ACS25192.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Geobacillus sp. WCH70]
          Length = 371

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 53/194 (27%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKK 59
           MN   K     ++  SGG DSS        +   V  +   ++   ++  +       + 
Sbjct: 1   MNKAPKDT-RVVVGMSGGVDSSVAALLLKQQGYDVIGIFMKNWDDTDENGVCTATEDYED 59

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +V +  +            +           T  +             +     I     
Sbjct: 60  VVRVCNQIGIPYYA-----VNFEKQYWDKVFTYFLDEYKAGRTPNPDVMC-NKEIKFKAF 113

Query: 120 ATLAYRLGITNIVIGVCETDYS---GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
              A  +G   +  G           Y   R       +T     LG      V  P+  
Sbjct: 114 LEHALSIGADYVATGHYARVEYRDGEYKMLRGVDQNKDQTYFLNQLGQSVLSKVMFPIGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K +  ++A+D G
Sbjct: 174 LEKAQVRQIAKDAG 187


>gi|148976604|ref|ZP_01813291.1| thiamine biosynthesis protein ThiI [Vibrionales bacterium SWAT-3]
 gi|145963955|gb|EDK29213.1| thiamine biosynthesis protein ThiI [Vibrionales bacterium SWAT-3]
          Length = 482

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 57/184 (30%), Gaps = 25/184 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           L L SGG DS       + R  +V    F+ G            +   + ++     +  
Sbjct: 181 LSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGP-------AHEI--GVKQVAHYLWNKY 231

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G       +       S   + V  +I +N            +F+     +A +L I  +
Sbjct: 232 G-------SSAKVKFISVDFEPVVAEILENVEDGQMGVVLKRMFMRAGGMVADKLKIEAL 284

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           V G      S         I  +   +         +  PL+   K +   LA+ IG +D
Sbjct: 285 VTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIIDLARTIGTED 335

Query: 192 LVNL 195
              +
Sbjct: 336 FAKV 339


>gi|32266455|ref|NP_860487.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter hepaticus ATCC
           51449]
 gi|81657428|sp|Q7U320|MNMA_HELHP RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|32262506|gb|AAP77553.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Helicobacter hepaticus ATCC 51449]
          Length = 345

 Score = 52.2 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 52/186 (27%), Gaps = 21/186 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIVELMPK 66
              LL SGG DSS C      +   V  +     D  +++ + +     V   +      
Sbjct: 2   KVALLMSGGVDSSYCAHLLSSQGYEVIGIYLKLHDKNKKHDIYIANCEQVAAHL------ 55

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                       +  L +    S+        ++   PN       ++        A  L
Sbjct: 56  -------HIDFQVLDLREEFKKSVYDTFVSSYKEGKTPNPCAICNPLMKFGLGLQKALEL 108

Query: 127 GITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           G   I  G            R      ++         L  E+   +  PL  L K +  
Sbjct: 109 GCDYIATGHYAQIKEVNGIKRIAKAVDESKDQSYFLYALPQEAIDRIIFPLGALLKEDIK 168

Query: 182 KLAQDI 187
           K A ++
Sbjct: 169 KTALEL 174


>gi|313902383|ref|ZP_07835786.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermaerobacter subterraneus DSM 13965]
 gi|313467314|gb|EFR62825.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermaerobacter subterraneus DSM 13965]
          Length = 404

 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 42/153 (27%), Gaps = 4/153 (2%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL--M 64
           +    L   SGG DSS   +   D+   V  ++       + E E R      +  +   
Sbjct: 5   RKGRVLAAMSGGVDSSVMAALLRDQGYEVIGVTMQTWPAMEPEDEARYGGCCSLSAVDDA 64

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            +  + LG  + +    +       +      +      PN  +     I        A 
Sbjct: 65  RRVAERLGIPYYVM--NMRQDFEEKVIDYFVAEYLQGRTPNPCIACNRYIKFDEFLRRAE 122

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETA 157
            LG   +  G            R    ++ +  
Sbjct: 123 ALGCDYVATGHYAIVEYDEALGRFILRKSADRR 155


>gi|157813134|gb|ABV81312.1| putative GMP synthetase [Lithobius forticatus]
          Length = 197

 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +      + D+V  +  D G   K E +       KI   +   
Sbjct: 45  KVLMLVSGGVDSTVCAALLHKALKEDQVIAVHIDNGFMRKNESKQVEQSLNKIGLKLKVV 104

Query: 68  K 68
            
Sbjct: 105 N 105


>gi|161833715|ref|YP_001597911.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Sulcia muelleri GWSS]
 gi|205828995|sp|A8Z5W4|MNMA_SULMW RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|152206205|gb|ABS30515.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Sulcia muelleri GWSS]
          Length = 380

 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 45/188 (23%), Gaps = 9/188 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  K    ++  SGG DSS        +   V  +   Y        E  +     +V  
Sbjct: 1   MNVKRKRVIVGMSGGVDSSVAALLLKKQGYDVIGIFMKYYNFECPWREDSIDAM--LVSQ 58

Query: 64  MPKWKDSLGED----HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
             K    + +       L +  L        T N  +          F+     +   F 
Sbjct: 59  SLKIPFYIIDITKNYKNLIIDYLYKEYKKGYTPNPDIICNSKIKFKFFLEKSIFLKSDFI 118

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           AT  Y        I                          L          PL WL K E
Sbjct: 119 ATGHYVRKKE---INENGKISYKIISGIDSNKDQSYFLCKLNKVQIKKSIFPLGWLNKKE 175

Query: 180 TWKLAQDI 187
             ++A   
Sbjct: 176 VREIANKY 183


>gi|154337399|ref|XP_001564932.1| GMP synthase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134061971|emb|CAM45055.1| putative glutamine amidotransferase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 656

 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 59/202 (29%), Gaps = 8/202 (3%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQR--NKVELECRLCVR 57
            +        L L SGG DS+ C    L     +RV  +  D+G    ++          
Sbjct: 216 RERTSNGQKVLCLASGGVDSTVCAMLLLKALGPERVVCIHIDHGFMRLHESAQVVEALNA 275

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP--NTFVPGRNIIF 115
             +   + K +D       +  A  G  ++++         ++      NTF+   + + 
Sbjct: 276 AGVRVHLVKAQDDFATASTVMTAKRGRAAYTTNKLCETTDPEEKRNIIGNTFMSVCDRVV 335

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA--INLGMESHVTVHTPLM 173
                 +   L     +        S Y     D I+       +   +     +  PL 
Sbjct: 336 KELQLDVENLLLAQGTLRPDLIESGSKYASANADAIKTHHNDTAVVRVLRDAGRIIEPLC 395

Query: 174 WLKKYETWKLAQDIGGQDLVNL 195
              K E   L   +G    +  
Sbjct: 396 DYHKDEVRDLGLRLGISRHLIE 417


>gi|119899062|ref|YP_934275.1| tRNA-specific 2-thiouridylase MnmA [Azoarcus sp. BH72]
 gi|205812510|sp|A1K983|MNMA_AZOSB RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|119671475|emb|CAL95388.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Azoarcus sp. BH72]
          Length = 365

 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 52/188 (27%), Gaps = 14/188 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS        +   V  L     + +  +  C     + +V++      
Sbjct: 2   KVVVGMSGGVDSSVTALLLKQQGYEVTGLFMKNWEDDDDDEYCSTR--QDLVDVASVCDV 59

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              +  ++            +  +   + +    PN  +   + I        A +LG  
Sbjct: 60  IGIDLEVVN---FSAEYKDRVFADFLREYEAGRTPNPDILCNSEIKFRCFLDHAMQLGAE 116

Query: 130 NIVIGVCETDYSGYPDCRHDTI---------RAIETAINLGMESHVTVHTPLMWLKKYET 180
            I  G          D R +                   L          PL  L K E 
Sbjct: 117 RIATGHYAQVREWINDGRSEFQLLKAEDGTKDQSYFLYRLNQAQLAKTLFPLGGLYKREV 176

Query: 181 WKLAQDIG 188
            K+A+  G
Sbjct: 177 RKIAEAAG 184


>gi|152976810|ref|YP_001376327.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|189036217|sp|A7GT74|MNMA_BACCN RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|152025562|gb|ABS23332.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cytotoxicus NVH 391-98]
          Length = 371

 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 54/193 (27%), Gaps = 11/193 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN +  +    ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MNKLPHET-RVVIGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            +      + +    PN  V     I      
Sbjct: 58  NDVIEVCNQIGIPYYAVN---FEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWL 175
             A  LG   +  G           Y   R       +T     LG E       PL  L
Sbjct: 115 EHAMALGADYVATGHYARVAYMDGEYKMLRGVDDNKDQTYFLNQLGQEQLSKTMFPLGEL 174

Query: 176 KKYETWKLAQDIG 188
           KK +  ++A++ G
Sbjct: 175 KKPQIREMAKEAG 187


>gi|255264468|ref|ZP_05343810.1| argininosuccinate synthase [Thalassiobium sp. R2A62]
 gi|255106803|gb|EET49477.1| argininosuccinate synthase [Thalassiobium sp. R2A62]
          Length = 405

 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/178 (13%), Positives = 53/178 (29%), Gaps = 11/178 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W   +    V T + D GQ  ++E         +++  
Sbjct: 1   MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEPARAKA---ELMGA 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + + + E+ +            +      + +   ++    +  R +         A
Sbjct: 58  SDIYIEDVREEFVRDFVF---PMFRANAVYEGLYLLGTSIARPLISKRLVEIAEETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV----HTPLMWLKK 177
              G T         + + Y       + A      L   + +      H   +   K
Sbjct: 115 VAHGATGKGNDQVRFELAAYALNPDIKVIAPWREWELSSRTKLIDFAEQHQIPIAKDK 172


>gi|332857065|ref|ZP_08436371.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acinetobacter baumannii 6013150]
 gi|332870003|ref|ZP_08438979.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acinetobacter baumannii 6013113]
 gi|332726880|gb|EGJ58394.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acinetobacter baumannii 6013150]
 gi|332732503|gb|EGJ63754.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acinetobacter baumannii 6013113]
          Length = 381

 Score = 52.2 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 46/166 (27%), Gaps = 5/166 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS   +  L +  +VE L     + +     C     + + +    
Sbjct: 5   MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGLFMKNWEEDDGTEYC--TAMEDLADAQAV 62

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H    A         + ++   +      PN  +     I        A  L
Sbjct: 63  ADKIGIKLHT---ANFAMEYWDRVFEHFLAEYAAGRTPNPDILCNKEIKFRAFLDHAMTL 119

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
           G   I  G          + + +    +   ++   +    +H   
Sbjct: 120 GADFIATGHYARRAETAYNSKGEAYAPLLRGLDNNKDQTYFLHAVH 165


>gi|260580728|ref|ZP_05848554.1| thiamine biosynthesis/tRNA modification protein ThiI [Haemophilus
           influenzae RdAW]
 gi|260092545|gb|EEW76482.1| thiamine biosynthesis/tRNA modification protein ThiI [Haemophilus
           influenzae RdAW]
          Length = 485

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 57/183 (31%), Gaps = 27/183 (14%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKWKD 69
            L L SGG DS       + R  RV    F+ G   +++ ++               W+ 
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGGTVHEIGVKQM---------AYHIWQR 230

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +  +AI  +     + + V        L    V   + +        A R  I 
Sbjct: 231 YSSSHKVRFIAINFEGVVGEILEKVDNGQMGVVLKRMMVRAASKV--------AQRFNIE 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            IV G      S         I     A+         V  PL+   K +   +A++IG 
Sbjct: 283 AIVTGEALGQVSSQTLTNLRLIDEAADAL---------VLRPLITHDKEQIIAMAKEIGT 333

Query: 190 QDL 192
            D+
Sbjct: 334 DDI 336


>gi|260752516|ref|YP_003225409.1| argininosuccinate synthase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258551879|gb|ACV74825.1| argininosuccinate synthase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 408

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 44/159 (27%), Gaps = 5/159 (3%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +K    +L +SGG D+S  L W  +     V T + D GQ  ++E        + +  
Sbjct: 1   MTEKVKRVVLAYSGGLDTSVILKWLQEHYGCEVVTFTADLGQGEELEP--ARKKAEMMGI 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                      +  +           +        +   ++    +  R I         
Sbjct: 59  KPEHIFMDDLREEFV--RDFVFPMMRANALYEGQYLLGTSIARPLIAKRQIEIARQVGAD 116

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
           A   G T         +   Y       + A     +L 
Sbjct: 117 AVAHGATGKGNDQIRFELGYYALAPDIKVIAPWREWDLN 155


>gi|149184375|ref|ZP_01862693.1| argininosuccinate synthase [Erythrobacter sp. SD-21]
 gi|148831695|gb|EDL50128.1| argininosuccinate synthase [Erythrobacter sp. SD-21]
          Length = 404

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 55/178 (30%), Gaps = 7/178 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S    W  + R   V T + D GQ  ++E          I + 
Sbjct: 1   MSDIKRVVLAYSGGLDTSVIAKWLEVGRGLEVVTFTADLGQGEEIEPAREKARAMGIPD- 59

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + + L E+ +            +  +     +   ++    +  R +         A
Sbjct: 60  EHIFIEDLREEFVRDFVF---PMMRANARYEGDYLLGTSIARPLISKRLVEIAHETGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYE 179
              G T         + S Y      T+ A     +L   + +        + + K +
Sbjct: 117 IAHGATGKGNDQVRFELSAYALDPDITVIAPWREWDLTSRTALIAWAEAHQIAVPKDK 174


>gi|126274941|ref|XP_001387008.1| argininosuccinate synthetase [Scheffersomyces stipitis CBS 6054]
 gi|126212877|gb|EAZ62985.1| argininosuccinate synthetase [Pichia stipitis CBS 6054]
          Length = 416

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 38/135 (28%), Gaps = 16/135 (11%)

Query: 5   IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + K    + L +SGG D+S  L+W L+    V     + GQ  + + E        I   
Sbjct: 1   MSKGK--VCLAYSGGLDTSVILAWLLEEGYEVIAFLANIGQ--EEDFEAAEKKALAIGA- 55

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                        + + +  +   S     +       N+          +       +A
Sbjct: 56  ----------TKFVVVDVRKEFVESVCFPAIQANAIYENVYLLGTSLARPVIAQAQIKVA 105

Query: 124 YRLGITNIVIGVCET 138
              G   +  G    
Sbjct: 106 EENGCFAVSHGCTGK 120


>gi|73662449|ref|YP_301230.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
 gi|123642746|sp|Q49Y59|MNMA_STAS1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|72494964|dbj|BAE18285.1| putative tRNA methyltransferase [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
          Length = 370

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/189 (12%), Positives = 47/189 (24%), Gaps = 11/189 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  K    ++  SGG DSS       ++   V  +             C     +   ++
Sbjct: 1   MSNKDTRVVVGMSGGVDSSVTAHILKEQGYDVIGIFMKNWDNTDENGYC--TATEDYNDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +          + +            +      + +    PN  V     I        A
Sbjct: 59  IAVCNQIGIPYYAVN---FEKEYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLEHA 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLKK 177
            +LG   +  G                               L       V  P+  ++K
Sbjct: 116 LKLGADYVATGHYARVRRHEDGHVEMLRGVDNNKDQTYFLNQLSQSQLSRVMFPIGDIEK 175

Query: 178 YETWKLAQD 186
            E  ++A++
Sbjct: 176 KEVRRIAEE 184


>gi|56551932|ref|YP_162771.1| argininosuccinate synthase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|61211393|sp|Q5NNQ0|ASSY_ZYMMO RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|56543506|gb|AAV89660.1| Argininosuccinate synthase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 408

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 44/159 (27%), Gaps = 5/159 (3%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +K    +L +SGG D+S  L W  +     V T + D GQ  ++E        + +  
Sbjct: 1   MTEKVKRVVLAYSGGLDTSVILKWLQEHYGCEVVTFTADLGQGEELEP--ARKKAEMMGI 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                      +  +           +        +   ++    +  R I         
Sbjct: 59  KPEHIFMDDLREEFV--RDFVFPMMRANALYEGQYLLGTSIARPLIAKRQIEIARQVGAD 116

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
           A   G T         +   Y       + A     +L 
Sbjct: 117 AVAHGATGKGNDQIRFELGYYALAPDIKVIAPWREWDLN 155


>gi|118594731|ref|ZP_01552078.1| argininosuccinate synthase [Methylophilales bacterium HTCC2181]
 gi|118440509|gb|EAV47136.1| argininosuccinate synthase [Methylophilales bacterium HTCC2181]
          Length = 405

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          +IK     +L +SGG D+S  L W    +   V T + D GQ+ ++E          + E
Sbjct: 1  MIKDVNKIVLAYSGGLDTSVILKWLQQEYNCEVVTFTADLGQKEEIEPARAKATSAGVKE 60

Query: 63 LM-PKWKDSLGEDHILPL 79
          +     ++    D++ P+
Sbjct: 61 IFIEDLREEFVRDYVFPM 78


>gi|323527176|ref|YP_004229329.1| argininosuccinate synthase [Burkholderia sp. CCGE1001]
 gi|323384178|gb|ADX56269.1| argininosuccinate synthase [Burkholderia sp. CCGE1001]
          Length = 408

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 51/157 (32%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +D  V T + D GQ  ++E   R    +  ++ 
Sbjct: 1   MSDIKKVVLAYSGGLDTSVILKWLQDNYDAEVVTFTADIGQGEELEP-ARKKALQLGIKQ 59

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + + L E+ +            + T      +   ++    +  R I         A
Sbjct: 60  ENIFIEDLREEFVRDFVF---PMFRANTIYEGEYLLGTSIARPLIAKRQIEIARATGAQA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         +   Y       + A     +L
Sbjct: 117 VSHGATGKGNDQVRFELGYYALEPGIKVIAPWREWDL 153


>gi|258405113|ref|YP_003197855.1| GMP synthase [Desulfohalobium retbaense DSM 5692]
 gi|257797340|gb|ACV68277.1| GMP synthase, large subunit [Desulfohalobium retbaense DSM 5692]
          Length = 515

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 53/197 (26%), Gaps = 21/197 (10%)

Query: 1   MNDIIKK---APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCV 56
           M D +         +   SGG DS+            ++  +  D G    +  +    V
Sbjct: 208 MRDSLPTLIGDGKVVCGLSGGIDSTVVAVLLHKAIGKQLHCIFVDNG---LLRQDEGEEV 264

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
            + +          +       L+ L  +      + +                +++ +L
Sbjct: 265 VQYLRRHFDLNLKYVQAQDRF-LSRLHGVEDPEEKRKIIGHTFIEVFEEEAKEIKDVQYL 323

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
                    +              S         I++      L     + +  PL  L 
Sbjct: 324 AQGTLYPDVIE-------------SVSFKGPSAVIKSHHNVGGLPERMQMDLVEPLRELF 370

Query: 177 KYETWKLAQDIGGQDLV 193
           K E  K+A ++G  D +
Sbjct: 371 KDEVRKVAVELGLPDFL 387


>gi|239637572|ref|ZP_04678544.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus warneri L37603]
 gi|239596790|gb|EEQ79315.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus warneri L37603]
          Length = 372

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/189 (11%), Positives = 46/189 (24%), Gaps = 11/189 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  +    ++  SGG DSS       ++   V  +             C     +   ++
Sbjct: 1   MTNQDTRVVVGMSGGVDSSVTAYLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDYNDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +          + +            +      + +    PN  V     I        A
Sbjct: 59  IAVCNQIGIPYYAVN---FEQEYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLEHA 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMWLKK 177
            +LG   +  G                               L  +    V  P+  + K
Sbjct: 116 LKLGADYVATGHYARIRRHEDGHVEMLRGIDNNKDQTYFLNQLSQQQLSKVMFPIGDIDK 175

Query: 178 YETWKLAQD 186
               ++A++
Sbjct: 176 KRVREIAEE 184


>gi|169632892|ref|YP_001706628.1| tRNA-specific 2-thiouridylase MnmA [Acinetobacter baumannii SDF]
 gi|229486328|sp|B0VUD6|MNMA_ACIBS RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|169151684|emb|CAP00474.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acinetobacter baumannii]
          Length = 377

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 46/166 (27%), Gaps = 5/166 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS   +  L +  +VE L     + +     C     + + +    
Sbjct: 1   MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGLFMKNWEEDDGTEYC--TAMEDLADAQAV 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H    A         + ++   +      PN  +     I        A  L
Sbjct: 59  ADKIGIKLHT---ANFAMEYWDRVFEHFLAEYAAGRTPNPDILCNKEIKFRAFLDHAMTL 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
           G   I  G          + + +    +   ++   +    +H   
Sbjct: 116 GADFIATGHYARRAETAYNSKGEAYAPLLRGLDNNKDQTYFLHAVH 161


>gi|301758858|ref|XP_002915251.1| PREDICTED: argininosuccinate synthase-like [Ailuropoda
          melanoleuca]
          Length = 412

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          +    S +L +SGG D+S  L W  ++   V     + GQ+   E         K+  
Sbjct: 1  MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEE--ARKKAMKLGA 56


>gi|281349494|gb|EFB25078.1| hypothetical protein PANDA_003249 [Ailuropoda melanoleuca]
          Length = 375

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          +    S +L +SGG D+S  L W  ++   V     + GQ+   E         K+  
Sbjct: 1  MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEE--ARKKAMKLGA 56


>gi|308062882|gb|ADO04769.1| argininosuccinate synthase [Helicobacter pylori Sat464]
          Length = 350

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 32/104 (30%), Gaps = 2/104 (1%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   AL LFSGG DS   +   +D+   V  L F+ G       + R  +     ++  K
Sbjct: 2   KPIKALALFSGGLDSLLSMKLLIDQGIEVSALHFNIGF--GGNKDKREYLENATAQIGAK 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPG 110
                  +      +           N  +    N   N F   
Sbjct: 60  LLVCDIREQFFNDVLFKPKYGYGKYFNPCIDCHANMFRNAFYKM 103


>gi|262306093|gb|ACY45639.1| gln amidotransferase [Phrynus marginemaculatus]
          Length = 196

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 2/63 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               L+L SGG DS+ C +      + D+V  +  D G   K E        K++   M 
Sbjct: 43  TNKVLMLVSGGVDSTVCAALLHKALKDDQVIAIHIDNGFMRKNESVQVEMSLKQLGLKMK 102

Query: 66  KWK 68
              
Sbjct: 103 VIN 105


>gi|149194412|ref|ZP_01871509.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Caminibacter mediatlanticus TB-2]
 gi|149135587|gb|EDM24066.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Caminibacter mediatlanticus TB-2]
          Length = 339

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 49/186 (26%), Gaps = 16/186 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLS--FDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+  SGG DS+            V  +      G  +   L+    + KKI       
Sbjct: 2   RVLVGVSGGVDSAVTTYLLKKAGYEVIGIYLKMHSGVNHSENLKKIEKLSKKIG------ 55

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      +  + +     + +      ++ + PN        I          +  
Sbjct: 56  -------FSYVVEDVEEEFRKEVYEYFIKSYEEGSTPNPCAMCNKQIKFGIFMNFLEKYN 108

Query: 128 ITNIVIGVC-ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                 G     D     + +            +  E    +  PL    K E   +A++
Sbjct: 109 CEKAATGHYVRNDGKFLYEAKDKNKDQSYFLFGIKKEVLPKLIFPLGEYTKNEIKLIAKE 168

Query: 187 IGGQDL 192
           IG ++ 
Sbjct: 169 IGLEEF 174


>gi|165923972|ref|ZP_02219804.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Coxiella burnetii RSA 334]
 gi|165916580|gb|EDR35184.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Coxiella burnetii RSA 334]
          Length = 362

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 47/179 (26%), Gaps = 10/179 (5%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS       ++   V  L     + +  +  C     + + +            
Sbjct: 14  LSGGVDSSVAALVLKEKGYEVIGLFMQNWETDSKDPFC--TAEQDLSDAKAIADHIGIPL 71

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
           +++  +      +      +    Q           R  I        A +LG T++  G
Sbjct: 72  YVVNFS--KAYWNHVFQHCLDEFAQGRTPNPDVWCNRE-IKFKSLLEHAKKLGATHLATG 128

Query: 135 VCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                 +   + R                 L          P+   +K E   +A+  G
Sbjct: 129 HYACIQNENNEYRLLKSNDSHKDQSYFLHLLNQYQLANSVFPIGGYQKSEVRAIAKKRG 187


>gi|25147557|ref|NP_741864.1| hypothetical protein M02D8.4 [Caenorhabditis elegans]
 gi|1086745|gb|AAA82381.1| Asparagine synthetase protein 2, isoform a, confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 567

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 42/170 (24%), Gaps = 6/170 (3%)

Query: 13  LLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           +L SGG DSS   S A      R   V   SF  G  +            K +       
Sbjct: 234 VLLSGGLDSSLVSSIASREMKRRGMAVH--SFSIGVDHNSPDVVAARKVAKFIGTTHHEF 291

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E+ I  L  L     S    ++        L          + L          G 
Sbjct: 292 YFSIEEGIKNLRKLIWHLESYDVTSIRASTPMYFLSEEIRKLGIKVVLSGEGADEIFGGY 351

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
                   + D+      R   +   +           +V   + +L K 
Sbjct: 352 LYFHNAPSDEDFQKETIDRVLHLYTSDCLRADKSSMAHSVEVRVPFLDKA 401


>gi|270012865|gb|EFA09313.1| hypothetical protein TcasGA2_TC030725 [Tribolium castaneum]
          Length = 687

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 2/63 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               LLL SGG DS+   +      R D++  +  D G   K E        +KI   + 
Sbjct: 230 NNKVLLLVSGGVDSTVAAALLHKALRPDQIIAIHIDNGFMRKNESSKVYQSLQKIGMNLR 289

Query: 66  KWK 68
             K
Sbjct: 290 VVK 292


>gi|189240082|ref|XP_001812886.1| PREDICTED: similar to gmp synthase [Tribolium castaneum]
          Length = 748

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 2/63 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               LLL SGG DS+   +      R D++  +  D G   K E        +KI   + 
Sbjct: 291 NNKVLLLVSGGVDSTVAAALLHKALRPDQIIAIHIDNGFMRKNESSKVYQSLQKIGMNLR 350

Query: 66  KWK 68
             K
Sbjct: 351 VVK 353


>gi|332874746|ref|ZP_08442616.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acinetobacter baumannii 6014059]
 gi|332737007|gb|EGJ67964.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acinetobacter baumannii 6014059]
          Length = 381

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 46/166 (27%), Gaps = 5/166 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS   +  L +  +VE L     + +     C     + + +    
Sbjct: 5   MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGLFMKNWEEDDGTEYC--TAMEDLADAQAV 62

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H    A         + ++   +      PN  +     I        A  L
Sbjct: 63  ADKIGIKLHT---ANFAMEYWDRVFEHFLAEYAAGRTPNPDILCNKEIKFRAFLDHAMTL 119

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
           G   I  G          + + +    +   ++   +    +H   
Sbjct: 120 GADFIATGHYARRAETAYNSKGEAYAPLLRGLDKNKDQTYFLHAVH 165


>gi|260892132|ref|YP_003238229.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ammonifex degensii KC4]
 gi|260864273|gb|ACX51379.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ammonifex degensii KC4]
          Length = 344

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 46/190 (24%), Gaps = 23/190 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +  SGG DS+T     L     V  ++         E E    V  K+         
Sbjct: 3   RVAVALSGGVDSATAAFLLLQAGYEVFGVTM---LVTGEEGEKAAEVAAKLK-------- 51

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +     L       + K           PN  V     +        A +LG  
Sbjct: 52  --IPHFVFD---LRQEFAQEVIKPFVEAYLAGLTPNPCVWCNRKLKFGLLLEKALKLGAD 106

Query: 130 NIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
            +  G     +      R+                 +L  +    V  PL    K E   
Sbjct: 107 FLATGHYARVWFDPARERYLLARGKDRRKDQSYFLYSLNQQQLARVLFPLGGRTKAENLL 166

Query: 183 LAQDIGGQDL 192
           L + +G    
Sbjct: 167 LVKKLGLPLR 176


>gi|253700862|ref|YP_003022051.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Geobacter sp. M21]
 gi|251775712|gb|ACT18293.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Geobacter sp. M21]
          Length = 359

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 56/191 (29%), Gaps = 6/191 (3%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK-- 58
           M+D        L+  SGG DSS   +   ++   V  +S    +R +             
Sbjct: 1   MSDK-SLKKRILVAMSGGVDSSVTAALLKEQGHDVIGVSLQLYERPESTPSGGKTCCSLT 59

Query: 59  KIVELMPKWKDSLGEDHILPLAI-LGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
            +++     K       ++ L     ++   + T   A     N         +  + L 
Sbjct: 60  DVMDAARVAKRLGIPFEVVDLRERFKELVIDNFTAEYAAGRTPNPCARCNERIKFGLLLE 119

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWL 175
             A+    L  T     + +     Y   +       ++    GM       +  P+  L
Sbjct: 120 MTASFGTDLLATGHYARIEQDSEGIYQLLKGLDPGKDQSYFLFGMNQEQLSRIVFPVGNL 179

Query: 176 KKYETWKLAQD 186
           +K    + A  
Sbjct: 180 EKRVVREHAAR 190


>gi|301167728|emb|CBW27312.1| GMP synthase [Bacteriovorax marinus SJ]
          Length = 522

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 55/181 (30%), Gaps = 13/181 (7%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              L  FSGG DS    +    R   D +     D+G     +L     +++K+      
Sbjct: 219 KKVLCAFSGGVDSLV-AAMLSHRVLGDNLYCFFVDHGLLRPQDLGHIKLLQEKL------ 271

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                    I+ +  L       L+     +    N        +   F          L
Sbjct: 272 ----PLNIEIIDVKDLFLSKLKGLSDPEEKRKMIGNTFIEVFEKKVHEFEESHGINFDYL 327

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+      D +  TI++      L     + +  PL  L K E  KL ++
Sbjct: 328 LQGTLYPDVIESISPHEEDGKSVTIKSHHNVGGLPERMKLKLLEPLRHLFKDEVRKLGEE 387

Query: 187 I 187
           +
Sbjct: 388 L 388


>gi|284931128|gb|ADC31066.1| Trifunctional protein RibF/TrmU (FAD synthetase, Riboflavin kinase,
           tRNA-specific 2-thiouridylase) [Mycoplasma gallisepticum
           str. F]
          Length = 657

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 14/32 (43%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVET 37
           ++ P  ++  SGG DS+ C      +   V  
Sbjct: 284 QEKPRVVVALSGGVDSAVCAYLLQQQGYDVVA 315


>gi|125624516|ref|YP_001032999.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactococcus lactis subsp. cremoris MG1363]
 gi|124493324|emb|CAL98297.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactococcus lactis subsp. cremoris MG1363]
 gi|300071310|gb|ADJ60710.1| tRNA-specific 2-thiouridylase MnmA [Lactococcus lactis subsp.
           cremoris NZ9000]
          Length = 384

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 49/194 (25%), Gaps = 11/194 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+         ++  SGG DSS       ++   V  +             C     +  
Sbjct: 9   MSGKSPAQTRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDENGVC--TATEDY 66

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 67  KDVAAVADQIGVPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 123

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMW 174
             A  LG   +  G      +      H    A          S +          PL  
Sbjct: 124 DYAMELGADYVATGHYAQVRTDEDGTVHMLRGADNNKDQTYFLSQLTQEQLKKTMFPLGH 183

Query: 175 LKKYETWKLAQDIG 188
           L+K E  ++A+  G
Sbjct: 184 LEKPEVRRIAEKAG 197


>gi|328852300|gb|EGG01447.1| hypothetical protein MELLADRAFT_45152 [Melampsora larici-populina
          98AG31]
          Length = 436

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 2/59 (3%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          +       LL +SGG D+S  L+W +++   V     D GQ  + + E       KI  
Sbjct: 1  MTDSKGKVLLAYSGGLDTSCILAWLIEQGYEVVAFMADVGQ--EEDFEAARLKALKIGA 57


>gi|315608621|ref|ZP_07883602.1| GMP synthase [Prevotella buccae ATCC 33574]
 gi|315249660|gb|EFU29668.1| GMP synthase [Prevotella buccae ATCC 33574]
          Length = 514

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 60/188 (31%), Gaps = 21/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS C +         +  +  D+G   K E        KK++E    
Sbjct: 213 NDRVILGLSGGVDSSVCATLLNKAIGKNLTCIFVDHGMLRKNE-------FKKVMEAYEG 265

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              ++                +S      ++   +      + GR+ + +  A       
Sbjct: 266 LGLNVV------------GVDASDKFFKDLEGVTDPEKKRKIIGRDFVEVFNAEAKKIT- 312

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G    D           I++      L  E H+ +  PL WL K E  ++  +
Sbjct: 313 DAKWLAQGTIYPDRIESLSITGMVIKSHHNVGGLPKEMHLQLCEPLQWLFKDEVRRVGYE 372

Query: 187 IGGQDLVN 194
           +G  + + 
Sbjct: 373 LGMPERLI 380


>gi|260911659|ref|ZP_05918239.1| GMP synthase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260634207|gb|EEX52317.1| GMP synthase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 514

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 58/187 (31%), Gaps = 21/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS C +       D++  +  D+G   K E        +K++E     
Sbjct: 214 DRVILGLSGGVDSSVCAALLNRAIGDKLTCIFVDHGMLRKNE-------FQKVMEAYKGL 266

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             ++                S   +   +             GR+ + +  A        
Sbjct: 267 GLNVIGVDASDKFFADLEGVSDPEEKRKI------------IGRDFVEVFNAEAKKIT-D 313

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +  G    D           I++      L  E H+ +  PL WL K E  ++  ++
Sbjct: 314 AKWLAQGTIYPDRIESLSITGMVIKSHHNVGGLPKEMHLKLCEPLQWLFKDEVRRVGLEM 373

Query: 188 GGQDLVN 194
           G    + 
Sbjct: 374 GMPQRLI 380


>gi|126695374|ref|YP_001090260.1| GMP synthase [Prochlorococcus marinus str. MIT 9301]
 gi|226739659|sp|A3PA84|GUAA_PROM0 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|126542417|gb|ABO16659.1| Glutamine amidotransferase class-I:GMP synthase [Prochlorococcus
           marinus str. MIT 9301]
          Length = 528

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 49/192 (25%), Gaps = 19/192 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSST          +++  +  D G   K E E               
Sbjct: 224 NKKVLLALSGGVDSSTLAFLLNKAIGNQLTCMFIDQGFMRKGEPEF-------------- 269

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +   +   + +  +                +           R              L
Sbjct: 270 LMNFFDKKFHIKVEYINARERFIAKLKGITDPEQKRKIIGEEFIRVFEEESNRLGPFQYL 329

Query: 127 GITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
               +   V E+  +       +     I++      L  +    +  PL  L K E  K
Sbjct: 330 AQGTLYPDVIESAGTNIDPKTGERIAVKIKSHHNVGGLPKDLQFKLVEPLRKLFKDEVRK 389

Query: 183 LAQDIGGQDLVN 194
           +   +G  D + 
Sbjct: 390 VGGALGLPDEII 401


>gi|312136736|ref|YP_004004073.1| gmp synthase (glutamine-hydrolyzing) [Methanothermus fervidus DSM
           2088]
 gi|311224455|gb|ADP77311.1| GMP synthase (glutamine-hydrolyzing) [Methanothermus fervidus DSM
           2088]
          Length = 308

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 56/188 (29%), Gaps = 28/188 (14%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              A++  SGG DSS     A     DR+  +  ++G   + E      +RK   +   K
Sbjct: 21  KSKAIIALSGGVDSSVTAFLAKKALGDRLIAVFVNHGLLREGE---AKEIRKFFKD---K 74

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 +     L  L  +      + +                 + +F+     +A   
Sbjct: 75  LNFRYVDASKRFLDALKGVKDPEKKRKII----------------SKVFIEIFEEVAREE 118

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               ++ G                       + L     + V  PL  L K E   LA++
Sbjct: 119 DAKYLLQGTIA-----PDWIESRGKIKSHHNVVLPSGLVLKVVEPLRDLYKDEVRILAKE 173

Query: 187 IGGQDLVN 194
           +G  + + 
Sbjct: 174 LGLPEKII 181


>gi|301301190|ref|ZP_07207346.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300214575|gb|ADJ78991.1| tRNA-specific 2-thiouridylase mnmA [Lactobacillus salivarius CECT
           5713]
 gi|300851189|gb|EFK78917.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 375

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 52/194 (26%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D  K     ++  SGG DSS        +   V  +             C   V +  
Sbjct: 1   MKD--KSQIRVVVGMSGGVDSSVSAYLLKQQGYDVVGVFMKNWDDKNDSGVC--TVTEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            +      + ++   PN  +     +      
Sbjct: 57  QDVAKVASQIGIPYYSVN---FEKEYWDRVFTYFLDEYKNGRTPNPDIMCNKEVKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A  +    I +G             H    A +          L  E    V  P+  
Sbjct: 114 DYAMSIDADYIAMGHYAQLRRDEDGRVHLLRGADDNKDQTYFLSQLSQEQLQKVMFPIGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  ++A++ G
Sbjct: 174 LQKSEVRRIAEEAG 187


>gi|170693516|ref|ZP_02884675.1| Argininosuccinate synthase [Burkholderia graminis C4D1M]
 gi|170141671|gb|EDT09840.1| Argininosuccinate synthase [Burkholderia graminis C4D1M]
          Length = 408

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 51/157 (32%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +D  V T + D GQ  ++E   R    +  ++ 
Sbjct: 1   MSDIKKVVLAYSGGLDTSVILKWLQDNYDAEVVTFTADIGQGEELEP-ARKKALQLGIKQ 59

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + + L E+ +            + T      +   ++    +  R I         A
Sbjct: 60  DNIFIEDLREEFVRDFVF---PMFRANTIYEGEYLLGTSIARPLIAKRQIEIARATGAQA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         +   Y       + A     +L
Sbjct: 117 VSHGATGKGNDQVRFELGYYALEPGIKVIAPWREWDL 153


>gi|163745096|ref|ZP_02152456.1| argininosuccinate synthase [Oceanibulbus indolifex HEL-45]
 gi|161381914|gb|EDQ06323.1| argininosuccinate synthase [Oceanibulbus indolifex HEL-45]
          Length = 408

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/158 (13%), Positives = 44/158 (27%), Gaps = 5/158 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W   +    V T + D GQ  ++E        + +   
Sbjct: 1   MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEP--ARKKAEMMGIA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                     +  +           +      + +   ++    +  R +         A
Sbjct: 59  PENIYIEDVREEFV--RDFVFPMFRANAVYEGLYLLGTSIARPLISKRLVEIAEETGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
              G T         + + Y       + A     +L 
Sbjct: 117 VAHGATGKGNDQVRFELAAYALNPDIKVIAPWREWDLS 154


>gi|160915329|ref|ZP_02077542.1| hypothetical protein EUBDOL_01338 [Eubacterium dolichum DSM 3991]
 gi|158433128|gb|EDP11417.1| hypothetical protein EUBDOL_01338 [Eubacterium dolichum DSM 3991]
          Length = 387

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 58/195 (29%), Gaps = 14/195 (7%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-----VELECRLCVRK 58
           ++K+    LL  SGG DS+       +    V                         V  
Sbjct: 1   MMKQ--KVLLGLSGGVDSAVAAYLLKEAGYDVTCAFMRNWDAYANNDILGNPTISNEVCP 58

Query: 59  KIVELM-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           +  + M  K      E  +L +  + +         ++   +    PN  +     I   
Sbjct: 59  QEQDFMDAKAVAEKLELPLLRVDFVKEYWDHVFQYFLSE-YEKGRTPNPDILCNKYIKFD 117

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPL 172
                A ++G   + +G       G  + R                 +  +S      P+
Sbjct: 118 AFLNYANKMGFDMVAMGHYAQVEHGPKESRLIRGADTNKDQTYFLAQVPQQSLQHALFPI 177

Query: 173 MWLKKYETWKLAQDI 187
             L+K+E  ++A+++
Sbjct: 178 GHLEKHEVRQIAKEL 192


>gi|120555499|ref|YP_959850.1| argininosuccinate synthase [Marinobacter aquaeolei VT8]
 gi|166220988|sp|A1U3U4|ASSY_MARAV RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|120325348|gb|ABM19663.1| argininosuccinate synthase [Marinobacter aquaeolei VT8]
          Length = 403

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 53/174 (30%), Gaps = 9/174 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  + W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MSDIKKVVLAYSGGLDTSVIVRWLQDTYNCEVVTFTADIGQGEEVEPARAKAEALGVKEI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                ++    D++ P+         + T      +   ++    +  R I         
Sbjct: 61  YIEDLREEFVRDYVFPM-------FRANTIYEGEYLLGTSIARPLIAKRLIDIANETGAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
           A   G T         +   Y       + A     +L     +  +     + 
Sbjct: 114 AISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLNSREKLLKYCEERNIP 167


>gi|332290675|ref|YP_004429284.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Krokinobacter diaphorus 4H-3-7-5]
 gi|332168761|gb|AEE18016.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Krokinobacter diaphorus 4H-3-7-5]
          Length = 397

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 37/135 (27%), Gaps = 3/135 (2%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            + ++  SGG DSS       ++   V  L       + V +           + M   +
Sbjct: 2   KTVVVGLSGGVDSSVTAHLLKEQGYNVIGLFMKNWHDDSVTISDECPWLDDSNDAMLVAE 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   +    L +     +   +  + +    PN  V     I       +A  LG 
Sbjct: 62  KLGIPFQTVD---LSEQYRERIVNYMFKEYEMGRTPNPDVLCNREIKFDVFMKIALSLGA 118

Query: 129 TNIVIGVCETDYSGY 143
             +  G      S  
Sbjct: 119 DYVATGHYCQKTSIE 133


>gi|309781297|ref|ZP_07676033.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ralstonia sp. 5_7_47FAA]
 gi|308919710|gb|EFP65371.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ralstonia sp. 5_7_47FAA]
          Length = 370

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 47/189 (24%), Gaps = 10/189 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS        +   V  L     + +     C     +  ++++   
Sbjct: 3   KKRIVVGMSGGVDSSVTAWLLKQQGYDVVGLFMKNWEDDDDSEYCSTR--QDWIDVVSVA 60

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                +   +            +  +   +      PN  V     I        A  LG
Sbjct: 61  DLIGVD---VEAVNFAAEYKDRVFADFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMALG 117

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G                    T         L          PL  + K +  +
Sbjct: 118 ADTIATGHYARVREVDGRFELLTAFDHTKDQSYFLHRLNQAQLSRTLFPLGEMPKTKVRE 177

Query: 183 LAQDIGGQD 191
           +A +IG  +
Sbjct: 178 IAAEIGLPN 186


>gi|195400843|ref|XP_002059025.1| GJ15215 [Drosophila virilis]
 gi|194141677|gb|EDW58094.1| GJ15215 [Drosophila virilis]
          Length = 363

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 53/214 (24%), Gaps = 12/214 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--------RLCVRK 58
              + ++  SGG DS+       +R   V  +       +     C             +
Sbjct: 1   MIRNVVVGMSGGVDSAVSAHLLKERGYNVLGVFMRNWDEHDESGRCSGEQDLKDAELACR 60

Query: 59  KIVELMPKWK---DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
            +   + +               L         +        I+ +      +       
Sbjct: 61  HLQIELRQVNYVKQYWTAVFSQFLDDYQQGLTPNPDILCNKHIKFDLFHRHALHTLQYDA 120

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
           +         LG           +                    +   +      PL  L
Sbjct: 121 VATGHYARNSLGDFLEHSSSQTPEDVRLLIPADTFKDQTFFLAGIAHAALQRTMFPLGGL 180

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRD 209
           KK E  +LA+ IG    +    E +  C++GKRD
Sbjct: 181 KKTEVKQLARRIG-LHRLAEKRESTGICFVGKRD 213


>gi|241664140|ref|YP_002982500.1| tRNA-specific 2-thiouridylase MnmA [Ralstonia pickettii 12D]
 gi|240866167|gb|ACS63828.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ralstonia pickettii 12D]
          Length = 370

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 47/189 (24%), Gaps = 10/189 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS        +   V  L     + +     C     +  ++++   
Sbjct: 3   KKRIVVGMSGGVDSSVTAWLLKQQGYDVVGLFMKNWEDDDDSEYCSTR--QDWIDVVSVA 60

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                +   +            +  +   +      PN  V     I        A  LG
Sbjct: 61  DLIGVD---VEAVNFAAEYKDRVFADFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMALG 117

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G                    T         L          PL  + K +  +
Sbjct: 118 ADTIATGHYARVREVDGRFELLKAFDHTKDQSYFLHRLNQAQLSRTLFPLGEMPKTKVRE 177

Query: 183 LAQDIGGQD 191
           +A +IG  +
Sbjct: 178 IAAEIGLPN 186


>gi|88801179|ref|ZP_01116722.1| argininosuccinate synthase [Reinekea sp. MED297]
 gi|88776082|gb|EAR07314.1| argininosuccinate synthase [Reinekea sp. MED297]
          Length = 406

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 49/158 (31%), Gaps = 9/158 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S    W  + +   V T + D GQ  +VE          I E+
Sbjct: 1   MSDIKKVVLAYSGGLDTSVIAKWIAETYDCEVVTFTADLGQGEEVEPARAKAQALGIKEI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                ++    D++ P+         + T      +   ++    +  R I         
Sbjct: 61  YIEDLREEFVRDYVYPM-------FRANTVYEGEYLLGTSIARPLIAKRLIEIANETGAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         +   Y       + A     +L
Sbjct: 114 AIAHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDL 151


>gi|296157213|ref|ZP_06840049.1| argininosuccinate synthase [Burkholderia sp. Ch1-1]
 gi|295892549|gb|EFG72331.1| argininosuccinate synthase [Burkholderia sp. Ch1-1]
          Length = 408

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 51/157 (32%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +D  V T + D GQ  ++E   R    +  ++ 
Sbjct: 1   MSDIKKVVLAYSGGLDTSVILKWLQDNYDAEVVTFTADIGQGEELEP-ARKKALQLGIKP 59

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + + L E+ +            + T      +   ++    +  R I         A
Sbjct: 60  ENIYIEDLREEFVRDFVF---PMFRANTIYEGEYLLGTSIARPLIAKRQIEIARATGAQA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         +   Y       + A     +L
Sbjct: 117 VSHGATGKGNDQVRFELGYYALEPGIKVIAPWREWDL 153


>gi|229822980|ref|ZP_04449050.1| hypothetical protein GCWU000282_00272 [Catonella morbi ATCC 51271]
 gi|229787793|gb|EEP23907.1| hypothetical protein GCWU000282_00272 [Catonella morbi ATCC 51271]
          Length = 375

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 50/191 (26%), Gaps = 12/191 (6%)

Query: 5   IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      ++L  SGG DSS       ++   V  L             C     +   ++
Sbjct: 1   MSTNGKRVVLGMSGGVDSSVAALLLKEQGYEVIGLFMKNWDDTDENGHC--TATEDYQDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +   +      + +            + +    + +    PN  V     +        A
Sbjct: 59  VKVAEKIGIPYYSVN---FEKEYWDRVFEYFLREYRAGRTPNPDVMCNKEVKFKAFLDYA 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCRH------DTIRAIETAINLGMESHVTVHTPLMWLKK 177
             LG   I +G             H      +          L          PL  L+K
Sbjct: 116 MELGADYIAMGHYARSERDENGVVHLLRGLDNNKDQTYFLSQLSQAQLQKALFPLGHLQK 175

Query: 178 YETWKLAQDIG 188
            E   LA++ G
Sbjct: 176 SEVRALAEEAG 186


>gi|254474771|ref|ZP_05088157.1| argininosuccinate synthase [Ruegeria sp. R11]
 gi|214029014|gb|EEB69849.1| argininosuccinate synthase [Ruegeria sp. R11]
          Length = 408

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/158 (13%), Positives = 47/158 (29%), Gaps = 5/158 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W   +    V T + D GQ  +++        + +   
Sbjct: 1   MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELDP--ARKKAEMLGIK 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                     +  +   +      ++L +     +   ++    +  R +         A
Sbjct: 59  PENIYIEDVREEFVRDFVFPMFRGNALYEG--EYLLGTSIARPLISKRLVEIAAETGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
              G T         + + Y       + A     +L 
Sbjct: 117 VAHGATGKGNDQVRFELAAYALNPDIKVIAPWREWDLS 154


>gi|159905824|ref|YP_001549486.1| PP-loop domain-containing protein [Methanococcus maripaludis C6]
 gi|159887317|gb|ABX02254.1| PP-loop domain protein [Methanococcus maripaludis C6]
          Length = 296

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 55/200 (27%), Gaps = 15/200 (7%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVE-TLSFDYGQRNKVELECRLCVRKKIV 61
           D+  K    +++ SGG+DS+  L+ A D    V   + F +     +       +  K  
Sbjct: 33  DLNLKDEKIIVMLSGGKDSAVALAIAKDLGLNVHLCVHFVHKWSWDISTNEAKKLADKFN 92

Query: 62  ----------ELMPKWKDSLGE-DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPG 110
                     EL  K +D+ G+    +   I+         +     I         + G
Sbjct: 93  VPIIFPDITEELAKKTQDAKGKSICRICKTIMKARMIDIAKEENVRIIMTGETALEKIAG 152

Query: 111 RNIIFLVFAATLAYRLGITNIVIGV---CETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
               ++    +   R     +   +              R           NL    ++ 
Sbjct: 153 PVFQYIRENNSKVKRKDEFELYKKMELTKVPKRYKIHFFRPLIRVGHFDVFNLLKHYNLD 212

Query: 168 VHTPLMWLKKYETWKLAQDI 187
           +        K   W+    +
Sbjct: 213 IKRVSEAGNKIGYWREGCCL 232


>gi|78485259|ref|YP_391184.1| argininosuccinate synthase [Thiomicrospira crunogena XCL-2]
 gi|119361340|sp|Q31H63|ASSY_THICR RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|78363545|gb|ABB41510.1| argininosuccinate synthase [Thiomicrospira crunogena XCL-2]
          Length = 402

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 47/158 (29%), Gaps = 9/158 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +    +L +SGG D+S    W  + +   V T + D GQ  +V           I E+
Sbjct: 1   MSQIKKVVLAYSGGLDTSIIAKWLQEEYQCEVVTFTADIGQGEEVAPARAKAEAMGIKEI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                ++    D + P+         +            ++    +  R +         
Sbjct: 61  YIEDLREEFARDFVFPM-------MRANAIYEGEYRLGTSIARPLISKRLVEIAQETGAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         + + Y       + A     +L
Sbjct: 114 AISHGATGKGNDQVRFELNAYALMPDVKVIAPWREWDL 151


>gi|82581174|emb|CAI12844.1| argininosuccinate synthetase [Agaricus bisporus]
 gi|82581176|emb|CAI12846.1| argininosuccinate synthetase [Agaricus bisporus]
          Length = 425

 Score = 51.8 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 25/66 (37%), Gaps = 2/66 (3%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
          + +     LL +SGG D+S  L+W ++    V     D GQ  + +         K+   
Sbjct: 1  MPENKGRVLLAYSGGLDTSCILAWLIEEGYEVYAFMADVGQ--EEDYAAAEQKALKVGAK 58

Query: 64 MPKWKD 69
               D
Sbjct: 59 KFFLAD 64


>gi|330892534|gb|EGH25195.1| argininosuccinate synthase [Pseudomonas syringae pv. mori str.
           301020]
          Length = 402

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 58/201 (28%), Gaps = 13/201 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L +SGG D+S  L W  D +   V T + D GQ  +VE          + E+    
Sbjct: 2   NKVVLAYSGGLDTSVILKWLQDTYNCEVVTFTADLGQGEEVEPARAKAQAMGVKEI---- 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              + +     +         + T      +   ++    +  R I         A   G
Sbjct: 58  --YIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGADAISHG 115

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAIN------LGMESHVTVHTPLMWLKKYETW 181
            T         +   Y       + A     +      L   +           KK   +
Sbjct: 116 ATGKGNDQVRFELGAYALKPGVKVIAPWREWDLLSREKLMDYAEKHNIPIERHGKKKSPY 175

Query: 182 KLAQDIGGQDLVNLILEESHT 202
            +  ++        +LE++ T
Sbjct: 176 SMDANLLHISYEGGVLEDTWT 196


>gi|317503468|ref|ZP_07961505.1| GMP synthase [Prevotella salivae DSM 15606]
 gi|315665419|gb|EFV05049.1| GMP synthase [Prevotella salivae DSM 15606]
          Length = 514

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 60/188 (31%), Gaps = 21/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS C +       D +  +  D+G   K E    +   + +      
Sbjct: 213 NDRVILGLSGGVDSSVCATLLNKAIGDHLTCIFVDHGMLRKNEFSKVMEAYEGLG----- 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   H++ +         S      ++   +      + GR+ + +  A       
Sbjct: 268 -------LHVIGVDA-------SEKFFKDLEGVTDPEQKRKIIGRDFVEVFNAEAKKIT- 312

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G    D          TI++      L  E  + +  PL WL K E  ++  +
Sbjct: 313 DAKWLAQGTIYPDRIESLSITGMTIKSHHNVGGLPEEMKLKLCEPLQWLFKDEVRRVGYE 372

Query: 187 IGGQDLVN 194
           +G  + + 
Sbjct: 373 LGMPERLI 380


>gi|268608557|ref|ZP_06142284.1| tRNA-specific 2-thiouridylase MnmA [Ruminococcus flavefaciens FD-1]
          Length = 358

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 55/194 (28%), Gaps = 20/194 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLS--------FDYGQR------NKVELECRL 54
              ++  SGG DSS       ++   V  ++         D  Q+         ++E   
Sbjct: 2   KKVMVGMSGGVDSSVAAMLLREQGYDVMGVTLKLFSDEDIDQAQKEGKTCCALSDVEDAR 61

Query: 55  CVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            V +++        +         +    D      T N  ++   +   +  +     +
Sbjct: 62  SVARRLG-FEHLVFNFKDNFREHVMKQFSDSYLCGRTPNPCIECNRHVKFDKMLRRALEL 120

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
              + AT  Y +   +   G      S         +    T   L          PL  
Sbjct: 121 EYDYIATGHYAVCEYDEERGRWLLKRSADRSKDQTYVLYSLTQEQLSHTL-----FPLGS 175

Query: 175 LKKYETWKLAQDIG 188
           L K +  +LA+  G
Sbjct: 176 LDKTQVRELAEKAG 189


>gi|113461819|ref|YP_719888.1| tRNA-specific 2-thiouridylase MnmA [Haemophilus somnus 129PT]
 gi|123327501|sp|Q0I5Y6|MNMA_HAES1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|112823862|gb|ABI25951.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus somnus 129PT]
          Length = 383

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 33/134 (24%), Gaps = 4/134 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 +   SGG DSS        +  +VE L     + +     C       + +   
Sbjct: 21  NSKKKVICGMSGGVDSSVSAFILQQQGYQVEGLFMKNWEEDDDTDYC--TAANDLADAQA 78

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  + H +      +   +     +A            +  + I F  F       
Sbjct: 79  VCDKLGIKLHKIN--FAAEYWDNVFEHFLAEYKAGRTPNPDILCNKEIKFKAFLEYAVED 136

Query: 126 LGITNIVIGVCETD 139
           LG   I  G     
Sbjct: 137 LGADYIATGHYVRR 150


>gi|195475939|ref|XP_002090240.1| GE12995 [Drosophila yakuba]
 gi|194176341|gb|EDW89952.1| GE12995 [Drosophila yakuba]
          Length = 683

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 56/194 (28%), Gaps = 8/194 (4%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIV-ELM 64
           +   LLL SGG DSS C +         ++  +  D G   K E E      + I  +L+
Sbjct: 228 SNKVLLLVSGGVDSSVCAALLRRALYPNQIIAVHVDNGFMRKNESEKVERSLRDIGIDLI 287

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP---NTFVPGRNIIFLVFAAT 121
            + +          +   G  S             +       + FV   N +       
Sbjct: 288 VRKEGYTFLTGTTQVKRPGQYSVVETPMLCQTYNPEEKRKIIGDIFVKVTNDVVAELKLK 347

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYE 179
               +     +        S       +TI+      +L  E      V  PL    K E
Sbjct: 348 PEEVMLAQGTLRPDLIESASNMVSTNAETIKTHHNDTDLIRELRNAGRVVEPLCDFHKDE 407

Query: 180 TWKLAQDIGGQDLV 193
              L  D+G    +
Sbjct: 408 VRDLGNDLGLPQEL 421


>gi|291558301|emb|CBL35418.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Eubacterium siraeum V10Sc8a]
          Length = 358

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 34/134 (25%), Gaps = 5/134 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY--GQRNKVELECRLCVRKKIVELM 64
               A++  SGG DSS        R      ++      +   +  E   C    + +  
Sbjct: 1   MNNKAVIAMSGGVDSSVAAYLMKQRVFDCIGVTMKLFANEDIGISREHSCCSLDDVEDAR 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     ++       D   + +        ++   PN  +     +        A 
Sbjct: 61  SVAYSLDMPYYVFN---FSDRFETDVIDRFIHAYENGITPNPCIDCNRYLKFDKLYMRAK 117

Query: 125 RLGITNIVIGVCET 138
            L    +V G    
Sbjct: 118 ELDRDYVVTGHYAR 131


>gi|212697288|ref|ZP_03305416.1| hypothetical protein ANHYDRO_01856 [Anaerococcus hydrogenalis DSM
          7454]
 gi|212675737|gb|EEB35344.1| hypothetical protein ANHYDRO_01856 [Anaerococcus hydrogenalis DSM
          7454]
          Length = 411

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 5/94 (5%)

Query: 2  NDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
           +I+ +A   +L +SGG D+S  ++W  +     V  +S D GQ      E      K +
Sbjct: 6  YEILNQAKKVVLAYSGGLDTSVMVTWLKENGAKEVICVSVDLGQ--VKNPEALEK--KAL 61

Query: 61 VELMPKWKDSLGEDHILPLAILGDISHSSLTKNV 94
               K+ +   ED  +       +   +  +NV
Sbjct: 62 KSGASKFYNVNVEDEFIEDYAFKTLKAGAKYENV 95


>gi|169795184|ref|YP_001712977.1| tRNA-specific 2-thiouridylase MnmA [Acinetobacter baumannii AYE]
 gi|213158152|ref|YP_002320203.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acinetobacter baumannii AB0057]
 gi|215482732|ref|YP_002324930.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acinetobacter baumannii AB307-0294]
 gi|239501147|ref|ZP_04660457.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acinetobacter baumannii AB900]
 gi|260556664|ref|ZP_05828882.1| tRNA methyl transferase [Acinetobacter baumannii ATCC 19606]
 gi|301346855|ref|ZP_07227596.1| tRNA-specific 2-thiouridylase MnmA [Acinetobacter baumannii AB056]
 gi|301511134|ref|ZP_07236371.1| tRNA-specific 2-thiouridylase MnmA [Acinetobacter baumannii AB058]
 gi|301596413|ref|ZP_07241421.1| tRNA-specific 2-thiouridylase MnmA [Acinetobacter baumannii AB059]
 gi|205811029|sp|B0VBY5|MNMA_ACIBY RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205815008|sp|A3M7G3|MNMA_ACIBT RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|226704765|sp|B7GZ21|MNMA_ACIB3 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|226704766|sp|B7I4K8|MNMA_ACIB5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|169148111|emb|CAM85974.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acinetobacter baumannii AYE]
 gi|213057312|gb|ACJ42214.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acinetobacter baumannii AB0057]
 gi|213987036|gb|ACJ57335.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acinetobacter baumannii AB307-0294]
 gi|260409923|gb|EEX03223.1| tRNA methyl transferase [Acinetobacter baumannii ATCC 19606]
          Length = 377

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 46/166 (27%), Gaps = 5/166 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS   +  L +  +VE L     + +     C     + + +    
Sbjct: 1   MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGLFMKNWEEDDGTEYC--TAMEDLADAQAV 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H    A         + ++   +      PN  +     I        A  L
Sbjct: 59  ADKIGIKLHT---ANFAMEYWDRVFEHFLAEYAAGRTPNPDILCNKEIKFRAFLDHAMTL 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
           G   I  G          + + +    +   ++   +    +H   
Sbjct: 116 GADFIATGHYARRAETAYNSKGEAYAPLLRGLDNNKDQTYFLHAVH 161


>gi|116511650|ref|YP_808866.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactococcus lactis subsp. cremoris SK11]
 gi|116107304|gb|ABJ72444.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactococcus lactis subsp. cremoris SK11]
          Length = 384

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 49/194 (25%), Gaps = 11/194 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+         ++  SGG DSS       ++   V  +             C     +  
Sbjct: 9   MSGKSPAQTRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDENGVC--TATEDY 66

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 67  KDVAAVADQIGVPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 123

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMW 174
             A  LG   +  G      +      H    A          S +          PL  
Sbjct: 124 DYAMELGADYVATGHYAQVRTDEDGTVHMLRGADNNKDQTYFLSQLTQEQLKKTMFPLGH 183

Query: 175 LKKYETWKLAQDIG 188
           L+K E  ++A+  G
Sbjct: 184 LEKPEVRRIAEKAG 197


>gi|300690463|ref|YP_003751458.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ralstonia solanacearum PSI07]
 gi|299077523|emb|CBJ50149.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ralstonia solanacearum PSI07]
          Length = 370

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 46/188 (24%), Gaps = 10/188 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS        +   V  L     + +     C     +  ++++    
Sbjct: 4   KRVVVGMSGGVDSSVTAWLLKQQGYEVVGLFMKNWEDDDDSEYCSTR--QDWIDVVSVAD 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               +   +            +  +   +      PN  V     I        A  LG 
Sbjct: 62  LIGVD---VEAVNFAAEYKDRVFADFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMALGA 118

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             I  G                    T         L          PL  + K    ++
Sbjct: 119 DTIATGHYARVREVDGRFELLKAFDHTKDQSYFLHRLNQAQLCRTLFPLGEIPKTRVREI 178

Query: 184 AQDIGGQD 191
           A +IG  +
Sbjct: 179 AAEIGLPN 186


>gi|256027773|ref|ZP_05441607.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
           [Fusobacterium sp. D11]
 gi|289765727|ref|ZP_06525105.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium sp. D11]
 gi|289717282|gb|EFD81294.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium sp. D11]
          Length = 362

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 56/195 (28%), Gaps = 17/195 (8%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D  K+     +  SGG DSST       +   +  ++       K E      V   +  
Sbjct: 18  DSSKRNIKVGVAMSGGVDSSTVAYLLKQQGYDIFGVTMKTF---KDEDSDAKKVCDDLG- 73

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     E ++L +    +     +   V+  +         V  R  I        
Sbjct: 74  ---------IEHYVLDVRD--EFKKKVVDYFVSEYMNGRTPNPCMVCNR-HIKFGKMLDF 121

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHD-TIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
               G + +  G      +G      D     +     +  +    +  P+  L+K +  
Sbjct: 122 ILSKGASFMATGHYTKLKNGLLSVGDDSNKDQVYFLSQIQKDRLNKIIFPVGDLEKSKLR 181

Query: 182 KLAQDIGGQDLVNLI 196
           +LA+ +G +      
Sbjct: 182 ELAEQLGVRVYSKKD 196


>gi|297619959|ref|YP_003708064.1| argininosuccinate synthase [Methanococcus voltae A3]
 gi|297378936|gb|ADI37091.1| argininosuccinate synthase [Methanococcus voltae A3]
          Length = 399

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 62/196 (31%), Gaps = 27/196 (13%)

Query: 4   IIKKAPS-ALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIV 61
           +  +    A+L +SGG D+S CL    D++   V +++ D GQ  +  +E      KK  
Sbjct: 1   MAHENKKIAVLAYSGGLDTSCCLKLLEDKYDYSVVSVAVDVGQPAEDLIEPEEK-AKKFG 59

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
            L         E H +      +                             +  V  A 
Sbjct: 60  VL---------EHHTID---AKEEFAKDYIFRAIKANALYEGYPLSTALARPLIAVKIAE 107

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL--MWLKKYE 179
           LA  L  + I           +        +    +I       + +  P+  + L + E
Sbjct: 108 LAESLNASAI----------SHGCTGKGNDQFRFESIMRAKTPSIEIVAPIRDLNLTRTE 157

Query: 180 TWKLAQDIGGQDLVNL 195
             + A++ G    V+L
Sbjct: 158 EIEYAREKGIPVPVDL 173


>gi|332025647|gb|EGI65809.1| GMP synthase [Acromyrmex echinatior]
          Length = 716

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 2/62 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              LLL SGG DS+ C +        ++V  L  + G   K E +       ++   +  
Sbjct: 239 KKVLLLVSGGVDSTVCAALLQKALSKEQVIALHINNGFMRKGETQFVEQSLAQLCVTLRV 298

Query: 67  WK 68
             
Sbjct: 299 VN 300


>gi|150003570|ref|YP_001298314.1| tRNA-specific 2-thiouridylase MnmA [Bacteroides vulgatus ATCC 8482]
 gi|205810521|sp|A6KZ28|MNMA2_BACV8 RecName: Full=tRNA-specific 2-thiouridylase mnmA 2
 gi|149931994|gb|ABR38692.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides vulgatus ATCC 8482]
          Length = 351

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/192 (11%), Positives = 49/192 (25%), Gaps = 15/192 (7%)

Query: 1   MNDIIKKAPSALLLF--SGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCV 56
           M +         +L   SGG DSS       D    V  ++F + ++       E    +
Sbjct: 1   MRETESNNK---VLLGMSGGTDSSVAALLLQDAGYEVTGITFRFYEKENDTEYLEDARAL 57

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
            +++      +         +    + +      T        +           + + +
Sbjct: 58  CERLNIPHLTYDVRDTFRKTIIDYFINEYMAG-HTPVPCTLCNNYLKWPLLKKISDEMGI 116

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
              AT  Y             T      D         +  +         +  P+  L 
Sbjct: 117 YHFATGHYVRRRFINGCYHITTGVDPDKDQSFFLWGLPQEILQ-------RMLLPMGNLT 169

Query: 177 KYETWKLAQDIG 188
           K    ++A + G
Sbjct: 170 KARVREIAAERG 181


>gi|68535922|ref|YP_250627.1| argininosuccinate synthase [Corynebacterium jeikeium K411]
 gi|260577982|ref|ZP_05845906.1| argininosuccinate synthase [Corynebacterium jeikeium ATCC 43734]
 gi|119361267|sp|Q4JVZ8|ASSY_CORJK RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|68263521|emb|CAI37009.1| argG [Corynebacterium jeikeium K411]
 gi|258603872|gb|EEW17125.1| argininosuccinate synthase [Corynebacterium jeikeium ATCC 43734]
          Length = 398

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 1/51 (1%)

Query: 7  KAPSALLLFSGGQDSSTC-LSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
               +L +SGG D++      A +R   V  +S D GQ  +     R   
Sbjct: 1  MKDRVVLAYSGGLDTTVAISWIAKERNAEVVCVSIDLGQGGEDMETVRQRA 51


>gi|20090985|ref|NP_617060.1| argininosuccinate synthase [Methanosarcina acetivorans C2A]
 gi|22095473|sp|Q8TNY5|ASSY_METAC RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|19916071|gb|AAM05540.1| argininosuccinate synthase [Methanosarcina acetivorans C2A]
          Length = 394

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 59/205 (28%), Gaps = 10/205 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKI--VE 62
                 L +SGG D+S C+    ++  +D V T+S D GQ  + E++      +KI    
Sbjct: 1   MVKKVALAYSGGLDTSVCIPILKEKYGYDEVITISVDVGQ-PEEEIKKADAKAEKISNKH 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                K+   +D+I PL          +      +                + L    T 
Sbjct: 60  YTIDAKEEFVKDYIFPLIKANGDYEGYVMGTSVARPLIAKKVVEAAIKEGAVALAHGCTG 119

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
                +    +          P    +  R  E          V V     W      W 
Sbjct: 120 KGNDQLRFEAVFRQTDMDVIAPMREMNLTREWEIDYAKEHGIPVEVTKAKPWSVDENIWS 179

Query: 183 LAQDIGGQD-----LVNLILEESHT 202
            + + G  +         I E + +
Sbjct: 180 RSIEGGKLEDPSFVPPEEIFEWTKS 204


>gi|296135318|ref|YP_003642560.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thiomonas intermedia K12]
 gi|295795440|gb|ADG30230.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thiomonas intermedia K12]
          Length = 368

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 47/188 (25%), Gaps = 10/188 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               + ++  SGG DSS        +   V  L     + +     C       +     
Sbjct: 4   SSRGTVVVGLSGGVDSSVSAWLLKQQGYTVVGLFMKNWEDDDDSEYCSTRQ-DWLDAAS- 61

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D +G D  +            +  +   +      PN  V     I        A R
Sbjct: 62  -VADRIGID--IEAVNFAAEYKERVFADFLREYAAGRTPNPDVLCNAEIKFKAFLDHAMR 118

Query: 126 LGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           LG   I  G                    +         L          P+  L K E 
Sbjct: 119 LGADRIATGHYARVRETDHGFELLRGLDASKDQSYFLHRLNQAQLARTLFPVGELNKTEV 178

Query: 181 WKLAQDIG 188
            K+A+ IG
Sbjct: 179 RKVAEAIG 186


>gi|229551246|ref|ZP_04439971.1| argininosuccinate synthase [Lactobacillus rhamnosus LMS2-1]
 gi|258540996|ref|YP_003175495.1| argininosuccinate synthase [Lactobacillus rhamnosus Lc 705]
 gi|229315409|gb|EEN81382.1| argininosuccinate synthase [Lactobacillus rhamnosus LMS2-1]
 gi|257152672|emb|CAR91644.1| Argininosuccinate synthase [Lactobacillus rhamnosus Lc 705]
          Length = 406

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 20/175 (11%), Positives = 43/175 (24%), Gaps = 12/175 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                +L +SGG D+S  + W +D+   V  +  + GQ +      +    K        
Sbjct: 1   MTEKIVLAYSGGLDTSVAIPWLMDKGYEVIAVVLNVGQPDADFDAIQQKALK-------- 52

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +G    + +    + +   +   +                   + +     +A+  
Sbjct: 53  ----VGAIDSIVVDAQDEFADHYVAPVIKANALYEGDYPLVSALSRPLIIEHLVKIAHAQ 108

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
             T I  G                    E  I   +          +   K    
Sbjct: 109 NATAIAHGSTGKGNDQVRFEAAIHALDPEMKIEAPIRDFHWSREEEIDYAKEHHV 163


>gi|184158965|ref|YP_001847304.1| tRNA-specific 2-thiouridylase MnmA [Acinetobacter baumannii ACICU]
 gi|205811014|sp|B2HVN5|MNMA_ACIBC RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|183210559|gb|ACC57957.1| predicted tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase [Acinetobacter baumannii ACICU]
 gi|322508947|gb|ADX04401.1| trmU [Acinetobacter baumannii 1656-2]
 gi|323518933|gb|ADX93314.1| tRNA-specific 2-thiouridylase MnmA [Acinetobacter baumannii
           TCDC-AB0715]
          Length = 377

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 46/166 (27%), Gaps = 5/166 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS   +  L +  +VE L     + +     C     + + +    
Sbjct: 1   MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGLFMKNWEEDDGTEYC--TAMEDLADAQAV 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H    A         + ++   +      PN  +     I        A  L
Sbjct: 59  ADKIGIKLHT---ANFAMEYWDRVFEHFLAEYAAGRTPNPDILCNKEIKFRAFLDHAMTL 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
           G   I  G          + + +    +   ++   +    +H   
Sbjct: 116 GADFIATGHYARRAETAYNSKGEAYAPLLRGLDKNKDQTYFLHAVH 161


>gi|163787436|ref|ZP_02181883.1| argininosuccinate synthetase [Flavobacteriales bacterium ALC-1]
 gi|159877324|gb|EDP71381.1| argininosuccinate synthetase [Flavobacteriales bacterium ALC-1]
          Length = 394

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 61/198 (30%), Gaps = 7/198 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++ +SGG D+S C          +  +S + G   + E++       K+     K  
Sbjct: 2   KKLVIAYSGGLDTSYCAVSLSKAGYDIHAVSVNTGGFTQEEIKTIESNAYKMGVSTYKNI 61

Query: 69  DSLGE--DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           D++    D ++   I G++  +  T  +++  +        +     I   + A  +   
Sbjct: 62  DAIASYYDKVIKYLIFGNVLKN-NTYPLSVSAERIIQAIEIIQYAKSINAKYIAHGSTGA 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK--LA 184
           G   +   +     +              T                    KY   K    
Sbjct: 121 GNDQVRFDMIFQTLAPNIKIITPIRDGKLTRQEEIDYLIENGIDMFWNKAKYSINKGLWG 180

Query: 185 QDIGGQDLV--NLILEES 200
             +GG++ +   L L ++
Sbjct: 181 TSVGGEETLTSELPLPDT 198


>gi|149926700|ref|ZP_01914960.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Limnobacter sp. MED105]
 gi|149824629|gb|EDM83845.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Limnobacter sp. MED105]
          Length = 358

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 49/187 (26%), Gaps = 10/187 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            A + ++  SGG DSS        +   V  L     + +     C         + +  
Sbjct: 1   MAKTVVIGMSGGVDSSVSAWLLKQQGYNVIGLFMKNWEDDDDSEYCSSRQ-----DWLDA 55

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +      +            +      +      PN  +   + I        AY L
Sbjct: 56  ASVADVVGVDIEAVNFASEYKDRVFSVFLSEYSAGRTPNPDILCNSEIKFKAFLDHAYSL 115

Query: 127 GITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           G   I  G          + +       +         L          PL  ++K E  
Sbjct: 116 GADYIATGHYARVRELNGEFQLLKAVDHSKDQSYFLHRLNQAQLSKTLFPLGEIQKTEVR 175

Query: 182 KLAQDIG 188
           K+A ++G
Sbjct: 176 KIALELG 182


>gi|254304215|ref|ZP_04971573.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
 gi|148324407|gb|EDK89657.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
          Length = 337

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 8/86 (9%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVET---LSFDYGQRNKVELECRLCVR 57
          M D ++K   AL LFSGG DS+  +    ++   V     +S  +G +     E    + 
Sbjct: 1  MKDSMEKI-KALALFSGGLDSALAIKVVQEQGIEVIALNFVSHFFGGK----NEKAESMA 55

Query: 58 KKIVELMPKWKDSLGEDHILPLAILG 83
          K++   +           ++   + G
Sbjct: 56 KQLGIRLEYIDFKKRHTLVVEDPVYG 81


>gi|187925180|ref|YP_001896822.1| argininosuccinate synthase [Burkholderia phytofirmans PsJN]
 gi|229889864|sp|B2SY63|ASSY_BURPP RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|187716374|gb|ACD17598.1| Argininosuccinate synthase [Burkholderia phytofirmans PsJN]
          Length = 408

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 51/157 (32%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +D  V T + D GQ  ++E   R    +  ++ 
Sbjct: 1   MSDIKKVVLAYSGGLDTSVILKWLQDNYDAEVVTFTADIGQGEELEP-ARKKALQLGIKQ 59

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + + L E+ +            + T      +   ++    +  R I         A
Sbjct: 60  DNIFIEDLREEFVRDFVF---PMFRANTIYEGEYLLGTSIARPLIAKRQIEIARATGAQA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         +   Y       + A     +L
Sbjct: 117 VSHGATGKGNDQVRFELGYYALEPGIKVIAPWREWDL 153


>gi|238026255|ref|YP_002910486.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia glumae BGR1]
 gi|237875449|gb|ACR27782.1| TRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia glumae BGR1]
          Length = 393

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 44/190 (23%), Gaps = 10/190 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K    ++  SGG DSS       ++   V  L     + +     C         + +  
Sbjct: 2   KKQRVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQ-----DWIDV 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +      +            +      +      PN  V     I        A  L
Sbjct: 57  VSVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSL 116

Query: 127 GITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           G   I  G                    T         L          PL  + K +  
Sbjct: 117 GAETIATGHYARVRERDGRFELLKALDQTKDQSYFLHRLNQAQLSKTRFPLGEMPKTQVR 176

Query: 182 KLAQDIGGQD 191
           ++A  IG  +
Sbjct: 177 EIAARIGLPN 186


>gi|163857039|ref|YP_001631337.1| tRNA-specific 2-thiouridylase MnmA [Bordetella petrii DSM 12804]
 gi|205811276|sp|A9IQK6|MNMA_BORPD RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|163260767|emb|CAP43069.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bordetella petrii]
          Length = 376

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 47/191 (24%), Gaps = 14/191 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K    ++  SGG DSS        +   V  L     + +     C     + +++    
Sbjct: 12  KGRRVVVGMSGGVDSSVTAWLLKQQGYEVIGLFMKNWEDDDDSEYCSTR--QDLLDAASV 69

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 +   +            +      +      PN  V     I        A  L
Sbjct: 70  ADLVGVDFEYVN---FAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMTL 126

Query: 127 GITNIVIGVCETDYSGYPDCRHDTI---------RAIETAINLGMESHVTVHTPLMWLKK 177
           G  +I  G      +       +                   L          PL  + K
Sbjct: 127 GAEHIATGHYARVRAIAGAHGREYQLLKALDGSKDQSYFLHRLNQAQLSRTLFPLGEIHK 186

Query: 178 YETWKLAQDIG 188
            E  ++A DIG
Sbjct: 187 TEVRRIAHDIG 197


>gi|66546481|ref|XP_624200.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1-like [Apis
           mellifera]
          Length = 395

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 55/197 (27%), Gaps = 11/197 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--------RLCVRK 58
                ++  SGG DS+       ++   V  +            +C           + K
Sbjct: 1   MFKKIIVGISGGIDSAVTAFLLKNKGYDVTGVFMKNWDIKNETGKCQIDEDKEHAEWICK 60

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPG-RNIIFLV 117
           K+     +    + E        L +   +  T N  +        + F    R  +   
Sbjct: 61  KLKIPFVEVN-FVKEYWNNIFCYLTEQYENGYTPNPDILCNKYIKFDQFFNFARTKLQAD 119

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM-WLK 176
             AT  Y        +   + + +       D  +     +    +  +      +    
Sbjct: 120 AIATGHYAKTSFGPYLEHFKLNTNVKLLQAKDLGKDQTFFLCQVPQQALRYFMFPLGNYL 179

Query: 177 KYETWKLAQDIGGQDLV 193
           K +  K+A++IG   +V
Sbjct: 180 KKDVKKIAEEIGLDKIV 196


>gi|16124384|ref|NP_418948.1| argininosuccinate synthase [Caulobacter crescentus CB15]
 gi|221233067|ref|YP_002515503.1| argininosuccinate synthase [Caulobacter crescentus NA1000]
 gi|24211528|sp|Q9ABU1|ASSY_CAUCR RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|254807515|sp|B8GXL9|ASSY_CAUCN RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|13421238|gb|AAK22116.1| argininosuccinate synthase [Caulobacter crescentus CB15]
 gi|220962239|gb|ACL93595.1| argininosuccinate synthase [Caulobacter crescentus NA1000]
          Length = 408

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 60/210 (28%), Gaps = 19/210 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           M D  K     +L +SGG D+S  L W   +    V T + D GQ  ++E      +   
Sbjct: 1   MAD--KSVKKVVLAYSGGLDTSIILKWLQTEYGAEVITFTADLGQGEEIEPARAKALAAG 58

Query: 60  I---VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
           +      +   ++    D++ P+         + T      +   ++    +  + I   
Sbjct: 59  VKPENIFIEDVREEFVRDYVFPM-------FRANTVYEGQYLLGTSIARPLIAKKQIEIA 111

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
                 A   G T         +   Y      T+ A     +      +          
Sbjct: 112 RKMGADAVSHGATGKGNDQVRFELGYYGLEPDITVIAPWREWDFKSREALLDFAE----- 166

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLG 206
           K++        G      +     H+   G
Sbjct: 167 KHQIQITKDKRGEAPFS-VDANLLHSSSEG 195


>gi|86136778|ref|ZP_01055356.1| argininosuccinate synthase [Roseobacter sp. MED193]
 gi|85826102|gb|EAQ46299.1| argininosuccinate synthase [Roseobacter sp. MED193]
          Length = 408

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 44/157 (28%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W   +    V T + D GQ  ++E        + +   
Sbjct: 1   MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEP--ARKKAELLGIK 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                     +  +           +      + +   ++    +  R +         A
Sbjct: 59  PENIYIEDVREEFV--RDFVFPMFRANAVYEGLYLLGTSIARPLISKRLVEIAEATGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         + + Y       + A     +L
Sbjct: 117 VAHGATGKGNDQVRFELAAYALNPDIKVIAPWREWDL 153


>gi|37526660|ref|NP_930004.1| hypothetical protein plu2770 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36786092|emb|CAE15144.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 510

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 21/162 (12%), Positives = 43/162 (26%), Gaps = 4/162 (2%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           ++FSGG DS+  L  A      +  +SF  G     ++E       +   +         
Sbjct: 233 IMFSGGIDSTIVLYLAKKYHHDITAISF--GLPGSKDIEIAQRYCTE-NNIKHIIYTFTQ 289

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           E+ I  +             +       +            I L    +     G  ++ 
Sbjct: 290 EELINNIQDAIYYGEFFEQIDAIDSTIAHFGYYIANRLGFKIALCGEGSDEIFAG-YDLF 348

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
               +  +       +     ++      M + V    P M 
Sbjct: 349 KTYPDPHHLSLYRLNNLHRTDLQRVDRASMRNTVEARVPFMD 390


>gi|119503231|ref|ZP_01625315.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [marine gamma proteobacterium HTCC2080]
 gi|119460877|gb|EAW41968.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [marine gamma proteobacterium HTCC2080]
          Length = 363

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 52/191 (27%), Gaps = 11/191 (5%)

Query: 4   IIKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +   +PS +++  SGG DSS       D+  RVE L       +     C    ++ + +
Sbjct: 1   MSNPSPSTVIVGMSGGVDSSVAALLLRDQGYRVEGLFMKNWDEDDGTDYC--TAKEDLAD 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     + H        +         +A            +  R  I        
Sbjct: 59  AEAVAASLGIKLH--SANFAAEYWDGVFEHFLAEYQSGRTPNPDILCNRE-IKFRAFLDY 115

Query: 123 AYRLGITNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
           A  LG   I     V      + +                  +G         P+  L K
Sbjct: 116 ATELGADFIATGHYVRRDDSGERTALLKGLDPDKDQSYFLHQVGHRELSRSLFPVGDLAK 175

Query: 178 YETWKLAQDIG 188
            E  K+A+  G
Sbjct: 176 PEVRKIAEQAG 186


>gi|170718124|ref|YP_001785155.1| tRNA-specific 2-thiouridylase MnmA [Haemophilus somnus 2336]
 gi|205816854|sp|B0UWF2|MNMA_HAES2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|168826253|gb|ACA31624.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus somnus 2336]
          Length = 383

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 33/134 (24%), Gaps = 4/134 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 +   SGG DSS        +  +VE L     + +     C       + +   
Sbjct: 21  NSKKKVICGMSGGVDSSVSAFILQQQGYQVEGLFMKNWEEDDDTDYC--TAANDLADAQA 78

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  + H +      +   +     +A            +  + I F  F       
Sbjct: 79  VCDKLGIKLHKIN--FAAEYWDNVFEHFLAEYKAGRTPNPDILCNKEIKFKAFLEYAVED 136

Query: 126 LGITNIVIGVCETD 139
           LG   I  G     
Sbjct: 137 LGADYIATGHYVRR 150


>gi|227544918|ref|ZP_03974967.1| argininosuccinate synthase [Lactobacillus reuteri CF48-3A]
 gi|300910054|ref|ZP_07127514.1| argininosuccinate synthase [Lactobacillus reuteri SD2112]
 gi|227185085|gb|EEI65156.1| argininosuccinate synthase [Lactobacillus reuteri CF48-3A]
 gi|300892702|gb|EFK86062.1| argininosuccinate synthase [Lactobacillus reuteri SD2112]
          Length = 415

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 49/178 (27%), Gaps = 13/178 (7%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D I      +L +SGG D+S  ++W  ++   V     D G     E +    +++K 
Sbjct: 1   MEDEIMSKEKIVLAYSGGLDTSVAIAWLKNKGYDVIACCIDVG-----EGKDLEAIKEK- 54

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                     +G    + +    D +   +   +                   + +    
Sbjct: 55  -------GLQVGAWKSVVIDAKRDFAEQFVLPALQAHAMYEQKYPLVSALSRPLIVQKLV 107

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            +A + G T I  G                  A +  I   +          +   K 
Sbjct: 108 AVANQYGATAIAHGCTGKGNDQVRFEAGIHALAPDMKIEDPIRDWHWSREEEIQYAKD 165


>gi|205822381|sp|A2RLX1|MNMA_LACLM RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 376

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 49/194 (25%), Gaps = 11/194 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+         ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSGKSPAQTRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDENGVC--TATEDY 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 59  KDVAAVADQIGVPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 115

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMW 174
             A  LG   +  G      +      H    A          S +          PL  
Sbjct: 116 DYAMELGADYVATGHYAQVRTDEDGTVHMLRGADNNKDQTYFLSQLTQEQLKKTMFPLGH 175

Query: 175 LKKYETWKLAQDIG 188
           L+K E  ++A+  G
Sbjct: 176 LEKPEVRRIAEKAG 189


>gi|325290764|ref|YP_004266945.1| GMP synthase (glutamine-hydrolyzing) [Syntrophobotulus glycolicus
           DSM 8271]
 gi|324966165|gb|ADY56944.1| GMP synthase (glutamine-hydrolyzing) [Syntrophobotulus glycolicus
           DSM 8271]
          Length = 510

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 52/186 (27%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E    + V+K   E     
Sbjct: 216 KKVLCALSGGVDSSVAAVLVHKAIGDQLTCIYVDHGFMRKDE---SVQVKKTFTEQFH-- 270

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    L L  +          +   + ++          R                
Sbjct: 271 ---------LNLDFVEADERFMAKVSGVSEPEEKRKLIGNEFIRLFEDEARKLGQV---- 317

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G    D         +TI+       L  +    +  PL  L K E  K+  ++
Sbjct: 318 -DFLVQGTLYPDIVESGTETAETIKTHHNVGGLPEDMKFELIEPLRMLFKDEVRKVGIEL 376

Query: 188 GGQDLV 193
           G  + +
Sbjct: 377 GLPEEI 382


>gi|298369001|ref|ZP_06980319.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria sp. oral taxon 014 str. F0314]
 gi|298283004|gb|EFI24491.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria sp. oral taxon 014 str. F0314]
          Length = 367

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 47/191 (24%), Gaps = 11/191 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN I     + ++  SGG DSS   +    +  RV  +     + +  +  C +      
Sbjct: 1   MN-IENTPQNIIVGLSGGVDSSVTAALLKQQGHRVHGVFMQNWEDDDNDEYCSIKQ---- 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +       +      + +          +      +      PN  V     I      
Sbjct: 56  -DSFDAIAVADILGIDIDIVNFAAQYKDKVFAYFLKEYGAGRTPNPDVLCNAEIKFKCFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A   G   I  G                              L          PL  L
Sbjct: 115 DYALEQGADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLQPFQLERAIFPLGGL 174

Query: 176 KKYETWKLAQD 186
           +K E  +LA +
Sbjct: 175 EKPEVRRLAAE 185


>gi|281201631|gb|EFA75840.1| GMP synthetase [Polysphondylium pallidum PN500]
          Length = 689

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 55/188 (29%), Gaps = 6/188 (3%)

Query: 10  SALLLFSGGQDSSTCLS-WALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +  A     +RV  L  D G     E        K +   +   
Sbjct: 249 KVLVLVSGGVDSTVCAALIAKAIGPERVIALHIDNGFMRHEESARVEQALKVLGLRLIVV 308

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             S    +      +  +    L   V  + +   + +TF+   +               
Sbjct: 309 DASQTFYN--STTTIKGVVTEQLKITVHPEEKRKIIGDTFMKVADDEVRKLGLNPNEVYL 366

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM--ESHVTVHTPLMWLKKYETWKLAQ 185
               +        S       D I+       L         V  PL    K E  +L +
Sbjct: 367 AQGTLRPDLIESSSKTVSGVADVIKTHHNDTELVRLLRETGRVVEPLRDYHKDEVRELGK 426

Query: 186 DIGGQDLV 193
           ++G  + +
Sbjct: 427 NLGLSEDL 434


>gi|242242895|ref|ZP_04797340.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus epidermidis W23144]
 gi|242233670|gb|EES35982.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus epidermidis W23144]
          Length = 372

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 49/189 (25%), Gaps = 11/189 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  K    ++  SGG DSS       ++   V  +             C     +   ++
Sbjct: 1   MSNKDIRVVVGMSGGVDSSVTAYLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDYNDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +          + +      +     +      + +    PN  V     I        A
Sbjct: 59  IAVCNQIGIPYYAVN---FEEQYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLEHA 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLKK 177
            +LG   +  G                               L  E    V  P+  ++K
Sbjct: 116 LKLGADYVATGHYARIRRHEDGHVEMLRGVDNNKDQTYFLNQLSQEQLSKVMFPIGDVEK 175

Query: 178 YETWKLAQD 186
            E  ++A++
Sbjct: 176 SEVRRIAEE 184


>gi|241999384|ref|XP_002434335.1| GMP synthase, putative [Ixodes scapularis]
 gi|215497665|gb|EEC07159.1| GMP synthase, putative [Ixodes scapularis]
          Length = 696

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 2/65 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               L+L SGG DS+ C +      R D+V  L  D G   K E        +++   + 
Sbjct: 239 NSKVLMLVSGGVDSTVCAALLHKALREDQVIALHIDNGFMRKEESVQVEQSLRQLGLRLR 298

Query: 66  KWKDS 70
               S
Sbjct: 299 VVDAS 303


>gi|209542792|ref|YP_002275021.1| tRNA-specific 2-thiouridylase MnmA [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209530469|gb|ACI50406.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 361

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 35/135 (25%), Gaps = 3/135 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS   +  +     V   +       +   +   C  + I +       
Sbjct: 2   RIMVAMSGGVDSSVVAARLVAEGHEVVGATLQLYDSRESARKGACCAGRDIHDARRVADR 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                +++           S+ +  A        P   V     +       +A  LG  
Sbjct: 62  LGIPHYVID---AETRFRQSVIETFADAYAGGETPVPCVACNQGVKFTDLLGMARDLGAE 118

Query: 130 NIVIGVCETDYSGYP 144
            +  G       G  
Sbjct: 119 AMATGHYVRRIEGPD 133


>gi|304314860|ref|YP_003850007.1| GMP synthase, subunit B [Methanothermobacter marburgensis str.
           Marburg]
 gi|302588319|gb|ADL58694.1| GMP synthase, subunit B [Methanothermobacter marburgensis str.
           Marburg]
          Length = 308

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 55/183 (30%), Gaps = 28/183 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             A++  SGG DSS     A     D +  +  D+G   + E      V+K   + +   
Sbjct: 22  EKAIIALSGGVDSSVASVLAGKAIGDNLTAVFVDHGLLREGE---AEYVKKTFSDRL--- 75

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                           +  +   +     +++    P         +F+     +A  +G
Sbjct: 76  ----------------NFRYIDASDEFLGELEGVTDPEEKRKIIGRVFIEVFERVAEEIG 119

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G              +        + L     + +  P+  L K E  ++  ++
Sbjct: 120 ARYLVQGTIA-----PDWIESEGKIKSHHNVALPHGLVLEIVEPIRELYKDEVREIGLEL 174

Query: 188 GGQ 190
           G  
Sbjct: 175 GLP 177


>gi|293609749|ref|ZP_06692051.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828201|gb|EFF86564.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 377

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 45/166 (27%), Gaps = 5/166 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS   +  L +  +VE L     + +     C     + + +    
Sbjct: 1   MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGLFMKNWEEDDGTEYC--TAMEDLADAQAV 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H    A         + +    +      PN  +     I        A  L
Sbjct: 59  ADKIGIKLHT---ANFAMEYWDRVFELFLAEYAAGRTPNPDILCNKEIKFRAFLDHAMTL 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
           G   I  G          + + +    +   ++   +    +H   
Sbjct: 116 GADFIATGHYARRGETAYNSKGEAYAPLLRGVDNNKDQTYFLHAVH 161


>gi|262306069|gb|ACY45627.1| gln amidotransferase [Leiobunum verrucosum]
          Length = 196

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 2/64 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              L+L SGG DS+ C +      + D+V  L  D G   K E        K+I   +  
Sbjct: 44  NKVLMLVSGGVDSTVCAALLHKALKEDQVIALHIDNGFMRKNESLQVEQSLKRIGLKLKV 103

Query: 67  WKDS 70
              S
Sbjct: 104 VNAS 107


>gi|294055153|ref|YP_003548811.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Coraliomargarita akajimensis DSM 45221]
 gi|293614486|gb|ADE54641.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Coraliomargarita akajimensis DSM 45221]
          Length = 356

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/176 (14%), Positives = 46/176 (26%), Gaps = 14/176 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DS+       ++   V           +  L    C  ++ +E       
Sbjct: 3   KVLVALSGGVDSAVAALLLKEQGYAVSGAYIRTWMNEEAPL--ADCPAQQDIEDSRAVAQ 60

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG D+ + + ++ + S   +   V    +        +  R +           + GI 
Sbjct: 61  HLGIDYEI-VNLVNEYSEHVVNYLVDGYKRGITPNPDMMCNREM-----------KFGIF 108

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                    D                +   L         T  + L K E    A 
Sbjct: 109 QNYALSQGFDAMATGHYVRKFKNEDGSFNLLEGIDKNKDQTYFLALLKQEQIAKAL 164


>gi|226951268|ref|ZP_03821732.1| argininosuccinate synthase [Acinetobacter sp. ATCC 27244]
 gi|294650785|ref|ZP_06728134.1| argininosuccinate synthase [Acinetobacter haemolyticus ATCC
          19194]
 gi|226838009|gb|EEH70392.1| argininosuccinate synthase [Acinetobacter sp. ATCC 27244]
 gi|292823331|gb|EFF82185.1| argininosuccinate synthase [Acinetobacter haemolyticus ATCC
          19194]
          Length = 447

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 24/61 (39%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              + FSGG D+S  L W   +       + + GQ ++ + +      ++   +  +  
Sbjct: 15 KKVGIAFSGGLDTSAALLWMKQKGSEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKARLI 74

Query: 69 D 69
          D
Sbjct: 75 D 75


>gi|159046012|ref|YP_001534806.1| argininosuccinate synthase [Dinoroseobacter shibae DFL 12]
 gi|189046388|sp|A8LPE0|ASSY_DINSH RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|157913772|gb|ABV95205.1| argininosuccinate synthase [Dinoroseobacter shibae DFL 12]
          Length = 406

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 59/203 (29%), Gaps = 13/203 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W    +   V T + D GQ  ++E         +++  
Sbjct: 1   MSAPKKVVLAYSGGLDTSIILKWLQTEYDCEVVTFTADLGQGEELEPARAKA---EMMGA 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + + L E+ +            +      + +   ++    +  R +         A
Sbjct: 58  SAIYIEDLREEFVRDFVF---PMFRANAVYEGLYLLGTSIARPLISKRLVEIAEAEGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              G T         + + Y       + A     +L   + +          K++    
Sbjct: 115 VAHGATGKGNDQVRFELAAYALNPDIKVIAPWREWDLSSRTKLIDFAE-----KHQIPIA 169

Query: 184 AQDIGGQDLVNLILEESHTCYLG 206
               G      +     HT   G
Sbjct: 170 KDKRGEAPFS-VDANLLHTSSEG 191


>gi|294675765|ref|YP_003576380.1| argininosuccinate synthase [Rhodobacter capsulatus SB 1003]
 gi|294474585|gb|ADE83973.1| argininosuccinate synthase [Rhodobacter capsulatus SB 1003]
          Length = 409

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 4/87 (4%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCV---RKKI 60
          +      +L +SGG D+S  L W   +    V T + D GQ  ++E           KK 
Sbjct: 1  MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVITFTADLGQGEELEPARAKAELMGIKKE 60

Query: 61 VELMPKWKDSLGEDHILPLAILGDISH 87
             +   ++    D + P+     +  
Sbjct: 61 NIHIVDVREEFVRDFVFPMFRANALYE 87


>gi|254295358|ref|YP_003061381.1| argininosuccinate synthase [Hirschia baltica ATCC 49814]
 gi|254043889|gb|ACT60684.1| argininosuccinate synthase [Hirschia baltica ATCC 49814]
          Length = 414

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 55/182 (30%), Gaps = 9/182 (4%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
           M+ +       +L +SGG D+S  L W        V T + D GQ  ++    R    + 
Sbjct: 1   MSLVTNPPKKVVLAYSGGLDTSIILKWLQTEFGCEVVTFTADLGQGEELGP-ARDKALQL 59

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
            ++    + D L ED +            + T    + +   ++    +  R I      
Sbjct: 60  GIKEENIFIDDLREDFVRDYVF---PMFRANTVYEGVYLLGTSIARPLISKRQIEIAEMV 116

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV----TVHTPLMWL 175
              A   G T         +   Y       + A          +H+      H   + +
Sbjct: 117 GADAVCHGATGKGNDQVRFELGYYALNPDIRVIAPWRDWEFKSRTHLLEFAEKHGIPVPM 176

Query: 176 KK 177
            K
Sbjct: 177 DK 178


>gi|254457847|ref|ZP_05071274.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Campylobacterales bacterium GD 1]
 gi|207085240|gb|EDZ62525.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Campylobacterales bacterium GD 1]
          Length = 487

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 56/181 (30%), Gaps = 25/181 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           L L SGG DS+    + + R  +   + F+ G            +   + ++        
Sbjct: 189 LSLMSGGFDSTVASYFTMKRGIKTHFIFFNLGG-------MAHEI--GVKQVALYLWSKF 239

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           G  H +          S    +V  +I  +  P         + L+ +  +A  L I  +
Sbjct: 240 GSSHRVKFI-------SVPFDDVLTEIFRSTAPTYMGVTLKRLMLMASEKVADSLEIDAL 292

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
           + G      S         I      +         +  PL  + K E   +A DIG + 
Sbjct: 293 LTGESVAQVSSQTLRNLAIIDQASNKL---------ILRPLSTMNKPEIMAIADDIGTRH 343

Query: 192 L 192
            
Sbjct: 344 F 344


>gi|126434444|ref|YP_001070135.1| tRNA-specific 2-thiouridylase MnmA [Mycobacterium sp. JLS]
 gi|166235066|sp|A3PXL7|MNMA_MYCSJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|126234244|gb|ABN97644.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycobacterium sp. JLS]
          Length = 359

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 52/227 (22%), Gaps = 10/227 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DSS   +  +D    V  +                    K      +   
Sbjct: 2   RVLVAMSGGVDSSVAAARMVDAGHDVVGVHLALSATPGTLRTGSRGCCSKEDAGDARRVA 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            + +          D     +  +     +    PN  V     I     A  A  LG  
Sbjct: 62  DVLDIPFYVWD-FADRFKEDVIDDFVASYERGETPNPCVRCNEKIKFSALAGRALALGFD 120

Query: 130 NIVIGVCETDYSGY-PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
            +  G       G                  L  +       P+    K +    A + G
Sbjct: 121 ALATGHYARLSDGRLRRAVDADKDQSYVLAVLTAQQLRHAVFPIGDTPKAQIRAEAAERG 180

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
                     +   C++   D R   G           R+   ++  
Sbjct: 181 LAVADKPDSHDI--CFIPSGDTRAFLGARIGV------RRGAVVDAG 219


>gi|108798844|ref|YP_639041.1| tRNA-specific 2-thiouridylase MnmA [Mycobacterium sp. MCS]
 gi|119867959|ref|YP_937911.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycobacterium sp. KMS]
 gi|123179026|sp|Q1BAU9|MNMA_MYCSS RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|166235067|sp|A1UE63|MNMA_MYCSK RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|108769263|gb|ABG07985.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycobacterium sp. MCS]
 gi|119694048|gb|ABL91121.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycobacterium sp. KMS]
          Length = 359

 Score = 51.8 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 52/227 (22%), Gaps = 10/227 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DSS   +  +D    V  +                    K      +   
Sbjct: 2   RVLVAMSGGVDSSVAAARMVDAGHDVVGVHLALSATPGTLRTGSRGCCSKEDAGDARRVA 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            + +          D     +  +     +    PN  V     I     A  A  LG  
Sbjct: 62  DVLDIPFYVWD-FADRFKEDVIDDFVASYERGETPNPCVRCNEKIKFSALAGRALALGFD 120

Query: 130 NIVIGVCETDYSGY-PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
            +  G       G                  L  +       P+    K +    A + G
Sbjct: 121 ALATGHYARLSDGRLRRAVDADKDQSYVLAVLTAQQLRHAVFPIGDTPKAQIRAEAAERG 180

Query: 189 GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFK 235
                     +   C++   D R   G           R+   ++  
Sbjct: 181 LAVADKPDSHDI--CFIPSGDTRAFLGARIGV------RRGAVVDAG 219


>gi|330445281|ref|ZP_08308933.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328489472|dbj|GAA03430.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 483

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 58/182 (31%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  +V    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGP-------AHEI--GVKQVAHYLWNK 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G    +    +         + V  +I +             +F+  A  +A + GI  
Sbjct: 231 YGSSAKVKFIAI-------DFEPVVGEILEKVDDGQMGVILKRMFMRAAGKVADKFGIEA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +  ++         +  PL+   K +   LA++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRHIDGVTDSL---------ILRPLINWDKEDIINLAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|325121410|gb|ADY80933.1| argininosuccinate synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 452

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 24/61 (39%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              + FSGG D+S  L W   +       + + GQ ++ + +      ++   +  +  
Sbjct: 20 KKVGIAFSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKARLI 79

Query: 69 D 69
          D
Sbjct: 80 D 80


>gi|322507305|gb|ADX02759.1| argG [Acinetobacter baumannii 1656-2]
          Length = 452

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 24/61 (39%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              + FSGG D+S  L W   +       + + GQ ++ + +      ++   +  +  
Sbjct: 20 KKVGIAFSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKARLI 79

Query: 69 D 69
          D
Sbjct: 80 D 80


>gi|299771036|ref|YP_003733062.1| argininosuccinate synthase [Acinetobacter sp. DR1]
 gi|298701124|gb|ADI91689.1| argininosuccinate synthase [Acinetobacter sp. DR1]
          Length = 447

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 24/61 (39%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              + FSGG D+S  L W   +       + + GQ ++ + +      ++   +  +  
Sbjct: 15 KKVGIAFSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKARLI 74

Query: 69 D 69
          D
Sbjct: 75 D 75


>gi|293608823|ref|ZP_06691126.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829396|gb|EFF87758.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 447

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 24/61 (39%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              + FSGG D+S  L W   +       + + GQ ++ + +      ++   +  +  
Sbjct: 15 KKVGIAFSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKARLI 74

Query: 69 D 69
          D
Sbjct: 75 D 75


>gi|294084987|ref|YP_003551747.1| argininosuccinate synthase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664562|gb|ADE39663.1| Argininosuccinate synthase [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 411

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 13/185 (7%)

Query: 1   MNDIIKKA--PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVR 57
           M  ++ K      +L +SGG D+S  L W  D +   V T + D GQ   +E        
Sbjct: 1   MTCLMSKQDIKKVVLAYSGGLDTSVILRWLQDHYNAEVVTFTADIGQGEDIEPARAKAEL 60

Query: 58  KKIVELM-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
             I ++     ++    D++ P+     +         ++           +  R I   
Sbjct: 61  MGIKQIYIEDLREEFVRDYVFPMFRANPLYEGCYLLGTSIARP-------LIAKRQIEIA 113

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH--TPLMW 174
                 A   G T         + + Y       + A     +LG  + +  +     + 
Sbjct: 114 REVGAEAVSHGATGKGNDQVRFELAYYAQQPDIKVIAPWREWDLGSRTKLIAYAEQNQIP 173

Query: 175 LKKYE 179
           + K +
Sbjct: 174 IPKDK 178


>gi|262372873|ref|ZP_06066152.1| argininosuccinate synthase [Acinetobacter junii SH205]
 gi|262312898|gb|EEY93983.1| argininosuccinate synthase [Acinetobacter junii SH205]
          Length = 447

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 24/61 (39%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              + FSGG D+S  L W   +       + + GQ ++ + +      ++   +  +  
Sbjct: 15 KKVGIAFSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKARLI 74

Query: 69 D 69
          D
Sbjct: 75 D 75


>gi|262279763|ref|ZP_06057548.1| argininosuccinate synthase [Acinetobacter calcoaceticus RUH2202]
 gi|262260114|gb|EEY78847.1| argininosuccinate synthase [Acinetobacter calcoaceticus RUH2202]
          Length = 447

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 24/61 (39%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              + FSGG D+S  L W   +       + + GQ ++ + +      ++   +  +  
Sbjct: 15 KKVGIAFSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKARLI 74

Query: 69 D 69
          D
Sbjct: 75 D 75


>gi|260550761|ref|ZP_05824969.1| argininosuccinate synthase [Acinetobacter sp. RUH2624]
 gi|260406267|gb|EEW99751.1| argininosuccinate synthase [Acinetobacter sp. RUH2624]
          Length = 447

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 24/61 (39%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              + FSGG D+S  L W   +       + + GQ ++ + +      ++   +  +  
Sbjct: 15 KKVGIAFSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKARLI 74

Query: 69 D 69
          D
Sbjct: 75 D 75


>gi|239503318|ref|ZP_04662628.1| argininosuccinate synthase [Acinetobacter baumannii AB900]
 gi|260557374|ref|ZP_05829589.1| argininosuccinate synthase [Acinetobacter baumannii ATCC 19606]
 gi|260409000|gb|EEX02303.1| argininosuccinate synthase [Acinetobacter baumannii ATCC 19606]
          Length = 447

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 24/61 (39%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              + FSGG D+S  L W   +       + + GQ ++ + +      ++   +  +  
Sbjct: 15 KKVGIAFSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKARLI 74

Query: 69 D 69
          D
Sbjct: 75 D 75


>gi|261367083|ref|ZP_05979966.1| GMP synthase [Subdoligranulum variabile DSM 15176]
 gi|282571204|gb|EFB76739.1| GMP synthase [Subdoligranulum variabile DSM 15176]
          Length = 514

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 50/188 (26%), Gaps = 22/188 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS C +        ++  +  D+G   K E       R+++ E+  +  
Sbjct: 217 KVLCALSGGVDSSVCAAMLAKAIGKQLTCVFVDHGLLRKHE-------REQVCEVFGEGG 269

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   +                   K+     P          F+      A ++G 
Sbjct: 270 QFDINFVCVD-----------ARDRFYTKLAGETAPERKRKIIGEEFIRVFEDEAKKIGA 318

Query: 129 T---NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                      +   SG                         +  PL  L K E  +  +
Sbjct: 319 VDFLAQGTIYPDVVESGLGGESATIKSHHNVGGLPDYVDFKEIVEPLRDLFKDEVRQAGR 378

Query: 186 DIGGQDLV 193
           ++G  + +
Sbjct: 379 ELGLPEYL 386


>gi|184157425|ref|YP_001845764.1| argininosuccinate synthase [Acinetobacter baumannii ACICU]
 gi|332854539|ref|ZP_08435417.1| argininosuccinate synthase [Acinetobacter baumannii 6013150]
 gi|332870166|ref|ZP_08439078.1| argininosuccinate synthase [Acinetobacter baumannii 6013113]
 gi|332875104|ref|ZP_08442940.1| argininosuccinate synthase [Acinetobacter baumannii 6014059]
 gi|183209019|gb|ACC56417.1| Argininosuccinate synthase [Acinetobacter baumannii ACICU]
 gi|323517324|gb|ADX91705.1| argininosuccinate synthase [Acinetobacter baumannii TCDC-AB0715]
 gi|332727948|gb|EGJ59343.1| argininosuccinate synthase [Acinetobacter baumannii 6013150]
 gi|332732433|gb|EGJ63689.1| argininosuccinate synthase [Acinetobacter baumannii 6013113]
 gi|332736721|gb|EGJ67712.1| argininosuccinate synthase [Acinetobacter baumannii 6014059]
          Length = 452

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 24/61 (39%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              + FSGG D+S  L W   +       + + GQ ++ + +      ++   +  +  
Sbjct: 20 KKVGIAFSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKARLI 79

Query: 69 D 69
          D
Sbjct: 80 D 80


>gi|169633088|ref|YP_001706824.1| argininosuccinate synthase [Acinetobacter baumannii SDF]
 gi|169151880|emb|CAP00724.1| argininosuccinate synthetase [Acinetobacter baumannii]
          Length = 447

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 24/61 (39%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              + FSGG D+S  L W   +       + + GQ ++ + +      ++   +  +  
Sbjct: 15 KKVGIAFSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKARLI 74

Query: 69 D 69
          D
Sbjct: 75 D 75


>gi|169796658|ref|YP_001714451.1| argininosuccinate synthase [Acinetobacter baumannii AYE]
 gi|213156114|ref|YP_002318534.1| argininosuccinate synthase [Acinetobacter baumannii AB0057]
 gi|215484150|ref|YP_002326375.1| argininosuccinate synthase [Acinetobacter baumannii AB307-0294]
 gi|301347760|ref|ZP_07228501.1| argininosuccinate synthase [Acinetobacter baumannii AB056]
 gi|301512249|ref|ZP_07237486.1| argininosuccinate synthase [Acinetobacter baumannii AB058]
 gi|301596671|ref|ZP_07241679.1| argininosuccinate synthase [Acinetobacter baumannii AB059]
 gi|169149585|emb|CAM87474.1| argininosuccinate synthetase [Acinetobacter baumannii AYE]
 gi|213055274|gb|ACJ40176.1| argininosuccinate synthase [Acinetobacter baumannii AB0057]
 gi|213988022|gb|ACJ58321.1| argininosuccinate synthase [Acinetobacter baumannii AB307-0294]
          Length = 447

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 24/61 (39%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              + FSGG D+S  L W   +       + + GQ ++ + +      ++   +  +  
Sbjct: 15 KKVGIAFSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKARLI 74

Query: 69 D 69
          D
Sbjct: 75 D 75


>gi|66505538|ref|XP_396374.2| PREDICTED: argininosuccinate synthase-like [Apis mellifera]
          Length = 412

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 2/59 (3%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + +     +L +SGG D+S  L W  ++  +V     + GQ  + + +       KI  
Sbjct: 1  MSETEKKVVLAYSGGLDTSCILLWLKEKGYQVIAYMANVGQ--EEDFDAARKKALKIGA 57


>gi|50084343|ref|YP_045853.1| argininosuccinate synthase [Acinetobacter sp. ADP1]
 gi|49530319|emb|CAG68031.1| argininosuccinate synthetase [Acinetobacter sp. ADP1]
          Length = 446

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 24/61 (39%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              + FSGG D+S  L W   +       + + GQ ++ + +      ++   +  +  
Sbjct: 15 KKVGIAFSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKARLI 74

Query: 69 D 69
          D
Sbjct: 75 D 75


>gi|257468460|ref|ZP_05632554.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
          [Fusobacterium ulcerans ATCC 49185]
 gi|317062723|ref|ZP_07927208.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Fusobacterium ulcerans ATCC 49185]
 gi|313688399|gb|EFS25234.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Fusobacterium ulcerans ATCC 49185]
          Length = 333

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 7/82 (8%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVET---LSFDYGQRNKVELECRLCVRKKIV 61
          ++K   AL LFSGG DS+  +    D+   V     +S  +G +     E    + +++ 
Sbjct: 1  MEKKIKALALFSGGLDSALAVKVVKDQGVEVVALNFVSHFFGGK----NEKAEKMAEQLG 56

Query: 62 ELMPKWKDSLGEDHILPLAILG 83
            +           IL   + G
Sbjct: 57 IKLEYIDFKSRHTEILKNPVYG 78


>gi|88803301|ref|ZP_01118827.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Polaribacter irgensii 23-P]
 gi|88780867|gb|EAR12046.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Polaribacter irgensii 23-P]
          Length = 173

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 36/131 (27%), Gaps = 3/131 (2%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS        +   V  L       + V +       +   + M   +
Sbjct: 2   KRVIVGLSGGVDSSVTAYLLKKQGYEVIGLFMKNWHDDSVTISNDCPWLEDSNDAMLVAE 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                  ++    L       +   +  + +    PN  V     I       +A +LG 
Sbjct: 62  KLGIPFQVVD---LSKDYKERIVDYMFSEYRKGRTPNPDVLCNREIKFDVFMDIALKLGA 118

Query: 129 TNIVIGVCETD 139
             +  G     
Sbjct: 119 DYVATGHYCRK 129


>gi|209364013|ref|YP_001424605.2| tRNA-specific 2-thiouridylase MnmA [Coxiella burnetii Dugway
           5J108-111]
 gi|207081946|gb|ABS77207.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Coxiella burnetii Dugway 5J108-111]
          Length = 371

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 47/179 (26%), Gaps = 10/179 (5%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS       ++   V  L     + +  +  C     + + +            
Sbjct: 23  LSGGVDSSVAALVLKEKGYEVIGLFMQNWETDSKDPFC--TAEQDLSDAKAIADHIGIPL 80

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
           +++  +      +      +    Q           R  I        A +LG T++  G
Sbjct: 81  YVVNFS--KAYWNHVFQHCLDEFAQGRTPNPDVWCNRE-IKFKSLLDHAKKLGATHLATG 137

Query: 135 VCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                 +   + R                 L          P+   +K E   +A+  G
Sbjct: 138 HYACIQNENNEYRLLKSNDSHKDQSYFLHLLNQYQLANSVFPIGGYQKSEVRAIAKKRG 196


>gi|164687029|ref|ZP_02211057.1| hypothetical protein CLOBAR_00655 [Clostridium bartlettii DSM
           16795]
 gi|164603914|gb|EDQ97379.1| hypothetical protein CLOBAR_00655 [Clostridium bartlettii DSM
           16795]
          Length = 511

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 54/188 (28%), Gaps = 19/188 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D +  +  D+G   K E +    + +         
Sbjct: 216 KKVLCALSGGVDSSVAAVLVHKAIGDNLTCVFVDHGLLRKNEGDDVERIFR--NTFDMNL 273

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                ED       LG +   +  +     I +          R              L 
Sbjct: 274 IRVNAEDR-----FLGKLKGVTEPEAKRKIIGEEF-------IRVFEEESNKLGKMDFLV 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I   + E+   G       TI++      L  +    +  PL  L K E  K+  ++
Sbjct: 322 QGTIYPDIVESGLGGE----SATIKSHHNVGGLPEDVDFQIVEPLKELFKDEVRKIGLEL 377

Query: 188 GGQDLVNL 195
           G +D +  
Sbjct: 378 GIEDKLIF 385


>gi|126738485|ref|ZP_01754190.1| argininosuccinate synthase [Roseobacter sp. SK209-2-6]
 gi|126720284|gb|EBA16990.1| argininosuccinate synthase [Roseobacter sp. SK209-2-6]
          Length = 408

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 44/157 (28%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W   +    V T + D GQ  ++E        + +   
Sbjct: 1   MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEP--ARQKAEMLGIK 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                     +  +           +      + +   ++    +  R +         A
Sbjct: 59  PENIFIEDVREEFV--RDFVFPMFRANAVYEGLYLLGTSIARPLISKRLVEIAEATGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         + + Y       + A     +L
Sbjct: 117 VAHGATGKGNDQVRFELAAYALNPDIKVIAPWREWDL 153


>gi|187930035|ref|YP_001900522.1| tRNA-specific 2-thiouridylase MnmA [Ralstonia pickettii 12J]
 gi|229486417|sp|B2UC85|MNMA_RALPJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|187726925|gb|ACD28090.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ralstonia pickettii 12J]
          Length = 370

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 47/189 (24%), Gaps = 10/189 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS        +   V  L     + +     C     +  ++++   
Sbjct: 3   KKRIVVGMSGGVDSSVTAWLLKQQGYDVVGLFMKNWEDDDDSEYCSTR--QDWIDVVSVA 60

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                +   +            +  +   +      PN  V     I        A  LG
Sbjct: 61  DLIGVD---VEAVNFAAEYKDRVFADFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMALG 117

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G                    T         L          PL  + K +  +
Sbjct: 118 ADTIATGHYARVREVDGRFELLKAFDHTKDQSYFLHRLNQAQLSRTLFPLGEMPKTKVRE 177

Query: 183 LAQDIGGQD 191
           +A +IG  +
Sbjct: 178 IAAEIGLPN 186


>gi|121607299|ref|YP_995106.1| tRNA-specific 2-thiouridylase MnmA [Verminephrobacter eiseniae
           EF01-2]
 gi|166991125|sp|A1WEN1|MNMA_VEREI RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|121551939|gb|ABM56088.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Verminephrobacter eiseniae EF01-2]
          Length = 370

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 47/193 (24%), Gaps = 12/193 (6%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DS+        +   V  +     + +     C         + + 
Sbjct: 4   SPKQRVVVGLSGGVDSAVTAYLLRQQGHEVVGIFMKNWEDDDDGGYCPSGT-----DFVD 58

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
               +      +            +      + Q    PN  V     I        A R
Sbjct: 59  AAAVADVIGIEIEHVNFAADYKERVFAEFLREYQAGRTPNPDVLCNAEIKFKAFLDHALR 118

Query: 126 LGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWLKKY 178
           LG   I  G            R                   L          PL  L+K 
Sbjct: 119 LGAEKIATGHYAGVRRNPASGRFELLKGADPAKDQSYFLHRLDQRQLSRTLFPLGALRKT 178

Query: 179 ETWKLAQDIGGQD 191
           E  +LA+DIG  +
Sbjct: 179 EVRRLAEDIGLPN 191


>gi|90961839|ref|YP_535755.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus salivarius UCC118]
 gi|122449023|sp|Q1WTT7|MNMA_LACS1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|90821033|gb|ABD99672.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus salivarius UCC118]
          Length = 375

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 49/185 (26%), Gaps = 11/185 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS        +   V  +             C   V +   ++      
Sbjct: 8   RVVVGMSGGVDSSVSAYLLKQQGYDVVGVFMKNWDDKNDSGVC--TVTEDYQDVAKVASQ 65

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                + +            +      + ++   PN  +     +        A  +   
Sbjct: 66  IGIPYYSVN---FEKEYWDRVFTYFLDEYKNGRTPNPDIMCNKEVKFKAFLDYAMSIDAD 122

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMWLKKYETWKL 183
            I +G             H    A +          L  E    V  P+  L+K E  ++
Sbjct: 123 YIAMGHYAQLRRDEDGRVHLLRGADDNKDQTYFLSQLSQEQLQKVMFPIGHLQKSEVRRI 182

Query: 184 AQDIG 188
           A++ G
Sbjct: 183 AEEAG 187


>gi|103485988|ref|YP_615549.1| argininosuccinate synthase [Sphingopyxis alaskensis RB2256]
 gi|119361325|sp|Q1GVV6|ASSY_SPHAL RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|98976065|gb|ABF52216.1| argininosuccinate synthase [Sphingopyxis alaskensis RB2256]
          Length = 405

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 55/182 (30%), Gaps = 10/182 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           M+D I      +L +SGG D+S  L W        V T + D GQ  ++E          
Sbjct: 1   MSDSI---KRVVLAYSGGLDTSVILKWLQVTYGCEVVTFTADLGQGEELEPARAKAELMG 57

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           I      + D L E+ +            +  +     +   ++    +  R +      
Sbjct: 58  IK-PEHIYIDDLREEFVRDFVF---PMMRANARYEGDYLLGTSIARPLISKRLVEIARET 113

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKK 177
              A   G T         + S Y       + A     +L   + +        + + K
Sbjct: 114 GADAVAHGATGKGNDQVRFELSAYALNPDIKVIAPWREWDLTSRTALIAWAEQHQIPVPK 173

Query: 178 YE 179
            +
Sbjct: 174 DK 175


>gi|323698299|ref|ZP_08110211.1| argininosuccinate synthase [Desulfovibrio sp. ND132]
 gi|323458231|gb|EGB14096.1| argininosuccinate synthase [Desulfovibrio desulfuricans ND132]
          Length = 410

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 48/158 (30%), Gaps = 9/158 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVR-KKIVE 62
           ++K    +L +SGG D+S  L W  + +   V  ++ D GQ  ++       ++   +  
Sbjct: 1   MQKIDKVVLAYSGGLDTSIILKWLKNNYDCDVICMTADLGQGEEMHGIEAKALKTGAVKA 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
            +   ++    D++ P+     +         A+           +  R +         
Sbjct: 61  YVEDLREEFVRDYVFPMFRANALYEGRYLLGTAIARP-------LISKRMVEIAEMEGAQ 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         + +           A      L
Sbjct: 114 AVAHGATGKGNDQVRFELATMALNPRLKTIAPWREWEL 151


>gi|303233021|ref|ZP_07319700.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Atopobium vaginae PB189-T1-4]
 gi|302480892|gb|EFL43973.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Atopobium vaginae PB189-T1-4]
          Length = 566

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 48/187 (25%), Gaps = 12/187 (6%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +       +++  +  ++G   K E E    V  K       
Sbjct: 252 KSRVILALSGGVDSSVVAALMHRAIGNQLTCVFVNHGFLRKDEPELVEEVFHK------- 304

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                    +   A    +       +   K +        V       L         L
Sbjct: 305 ---QFNVPLVHVHAEERYLELLRDVTDPEEKRRRIGTEFWKVFFEEAAKLSSGKEPIRYL 361

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                +        +     +  TI++    I      H  +  PL    K E   L   
Sbjct: 362 -AQGTIYPDIIESGARKTGGKASTIKSHHNLIPFPEGVHFDLIEPLDHFFKDEVRALGCA 420

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 421 LGLPSRM 427


>gi|300310029|ref|YP_003774121.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Herbaspirillum seropedicae SmR1]
 gi|300072814|gb|ADJ62213.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           protein [Herbaspirillum seropedicae SmR1]
          Length = 368

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 48/186 (25%), Gaps = 11/186 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS       ++   V  L     + +     C     +  ++ +   
Sbjct: 3   KKRVVIGMSGGVDSSVSAWLLKEQGYEVIGLFMKNWEDDDDSEYCSTR--EDWIDAVSVA 60

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                +   +            +      + Q    PN  V     I        A +LG
Sbjct: 61  DVVGVD---IEAVNFASEYKDRVFAEFLREYQAGRTPNPDVLCNAEIKFKAFLDHAMKLG 117

Query: 128 ITNIVIGVCETDYSGYPDCRH------DTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
              I  G       G             +         L  E       PL  + K E  
Sbjct: 118 ADLIATGHYARVRQGPQGDFQLLKALDASKDQSYFLHRLNQEQLSRTVFPLGEIHKTEVR 177

Query: 182 KLAQDI 187
           ++A+ +
Sbjct: 178 RIAEQL 183


>gi|326319478|ref|YP_004237150.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323376314|gb|ADX48583.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 403

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 20/198 (10%), Positives = 40/198 (20%), Gaps = 10/198 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DS+        +   V  +     + +     C   V     + + 
Sbjct: 4   SPKQRIVVGLSGGVDSAVTAHLLKQQGHEVVGIFMKNWEDDDDSEYCSSNV-----DFVD 58

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
               +      +            +      + +    PN  V     I        A R
Sbjct: 59  AAAVADVIGIEIEHVNFAAEYKDRVFAEFLREYEAGRTPNPDVLCNAEIKFKAFLDHAMR 118

Query: 126 LGITNI----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           +G   I       V                           +     +  L  L   +  
Sbjct: 119 VGAEKIATGHYARVRRVAADPGAMSGRHDRMESHATACDSAQDPHWRYELLKGLDPAKDQ 178

Query: 182 KLA-QDIGGQDLVNLILE 198
                 +    L   +  
Sbjct: 179 SYFLHRLNQAQLSRTLFP 196


>gi|262368656|ref|ZP_06061985.1| argininosuccinate synthetase [Acinetobacter johnsonii SH046]
 gi|262316334|gb|EEY97372.1| argininosuccinate synthetase [Acinetobacter johnsonii SH046]
          Length = 447

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 23/61 (37%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              + FSGG D+S  L W   +       + + GQ ++ + +      +    +  +  
Sbjct: 15 KKVGIAFSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEAYGAVKARLV 74

Query: 69 D 69
          D
Sbjct: 75 D 75


>gi|260549713|ref|ZP_05823930.1| tRNA-specific 2-thiouridylase mnmA [Acinetobacter sp. RUH2624]
 gi|260407230|gb|EEX00706.1| tRNA-specific 2-thiouridylase mnmA [Acinetobacter sp. RUH2624]
          Length = 377

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 46/166 (27%), Gaps = 5/166 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS   +  L +  +VE L     + +     C     + + +    
Sbjct: 1   MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGLFMKNWEEDDGTEYC--TAMEDLADAQAV 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H    A         + ++   +      PN  +     I        A  L
Sbjct: 59  ADKIGIKLHT---ANFAMEYWDRVFEHFLAEYAAGRTPNPDILCNKEIKFRAFLDHAMTL 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
           G   I  G          + + +    +   ++   +    +H   
Sbjct: 116 GADFIATGHYARRAETAYNSKGEAYAPLLRGLDNNKDQTYFLHAVH 161


>gi|85706906|ref|ZP_01037996.1| argininosuccinate synthase [Roseovarius sp. 217]
 gi|85668517|gb|EAQ23388.1| argininosuccinate synthase [Roseovarius sp. 217]
          Length = 408

 Score = 51.8 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 20/157 (12%), Positives = 44/157 (28%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W   +    V T + D GQ  +++        + +   
Sbjct: 1   MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELDP--ARQKAEMLGIK 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                     +  +           +      + +   ++    +  R +         A
Sbjct: 59  PENIYIEDVREEFV--RDFVFPMFRANALYEGLYLLGTSIARPLISKRLVEIAAMTGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         + + Y       + A     +L
Sbjct: 117 VAHGATGKGNDQVRFELAAYALNPDIKVIAPWRLWDL 153


>gi|329724654|gb|EGG61160.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus epidermidis VCU144]
          Length = 372

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 49/189 (25%), Gaps = 11/189 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  K    ++  SGG DSS       ++   V  +             C     +   ++
Sbjct: 1   MSNKDIRVVVGMSGGVDSSVTAYLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDYNDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +          + +      +     +      + +    PN  V     I        A
Sbjct: 59  IAVCNQIGIPYYAVN---FEEQYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLEHA 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLKK 177
            +LG   +  G                               L  E    V  P+  ++K
Sbjct: 116 LKLGADYVATGHYARIRRHDDGHVEMLRGVDNNKDQTYFLNQLSQEQLSKVMFPIGDIEK 175

Query: 178 YETWKLAQD 186
            E  ++A++
Sbjct: 176 SEVRRIAEE 184


>gi|325122971|gb|ADY82494.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acinetobacter calcoaceticus PHEA-2]
          Length = 377

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 45/166 (27%), Gaps = 5/166 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS   +  L +  +VE L     + +     C     + + +    
Sbjct: 1   MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGLFMKNWEEDDGTEYC--TAMEDLADAQAV 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H    A         + +    +      PN  +     I        A  L
Sbjct: 59  ADKIGIKLHT---ANFAMEYWDRVFELFLAEYAAGRTPNPDILCNKEIKFRAFLDHAMTL 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
           G   I  G          + + +    +   ++   +    +H   
Sbjct: 116 GADFIATGHYARRGETAYNSKGEAYAPLLRGVDNNKDQTYFLHAVH 161


>gi|317179807|dbj|BAJ57593.1| argininosuccinate synthase [Helicobacter pylori F32]
          Length = 350

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 15/37 (40%), Positives = 19/37 (51%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          K   AL LFSGG DS   +   +D+   V  L F+ G
Sbjct: 2  KPIKALALFSGGLDSLLSMKLLIDQGIEVSALHFNIG 38


>gi|317178320|dbj|BAJ56108.1| argininosuccinate synthase [Helicobacter pylori F30]
          Length = 350

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 15/37 (40%), Positives = 19/37 (51%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          K   AL LFSGG DS   +   +D+   V  L F+ G
Sbjct: 2  KPIKALALFSGGLDSLLSMKLLIDQGIEVSALHFNIG 38


>gi|308061316|gb|ADO03204.1| argininosuccinate synthase [Helicobacter pylori Cuz20]
          Length = 350

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 15/37 (40%), Positives = 19/37 (51%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          K   AL LFSGG DS   +   +D+   V  L F+ G
Sbjct: 2  KPIKALALFSGGLDSLLSMKLLIDQGIEVSALHFNIG 38


>gi|308070334|ref|YP_003871939.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Paenibacillus polymyxa E681]
 gi|305859613|gb|ADM71401.1| Probable tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Paenibacillus polymyxa E681]
          Length = 373

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/196 (11%), Positives = 45/196 (22%), Gaps = 13/196 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKK 59
           M     +    ++  SGG DSS       ++   V  +   ++   ++          + 
Sbjct: 1   MAKANHET-RVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDEFGRCTAEEDAED 59

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +  +  +            +    +      +  +             +  R  I     
Sbjct: 60  VRRVCEQIDIPYYT-----VNFEKEYFDKVFSYFLDEYKAGRTPNPDVMCNRE-IKFGEF 113

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMW 174
              A  LG   +  G                              L          P+  
Sbjct: 114 LNKALDLGADYVATGHYAQVVEEDGHFTLLRGVDSNKDQTYFLNALSQTQLSRAMFPIGH 173

Query: 175 LKKYETWKLAQDIGGQ 190
           L K E  K+A+  G  
Sbjct: 174 LPKPEVRKIAEAAGLY 189


>gi|297379235|gb|ADI34122.1| argininosuccinate synthase [Helicobacter pylori v225d]
          Length = 350

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 15/37 (40%), Positives = 19/37 (51%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          K   AL LFSGG DS   +   +D+   V  L F+ G
Sbjct: 2  KPIKALALFSGGLDSLLSMKLLIDQGIEVSALHFNIG 38


>gi|188526823|ref|YP_001909510.1| argininosuccinate synthase [Helicobacter pylori Shi470]
 gi|188143063|gb|ACD47480.1| argininosuccinate synthase [Helicobacter pylori Shi470]
          Length = 350

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 15/37 (40%), Positives = 19/37 (51%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          K   AL LFSGG DS   +   +D+   V  L F+ G
Sbjct: 2  KPIKALALFSGGLDSLLSMKLLIDQGIEVSALHFNIG 38


>gi|187251179|ref|YP_001875661.1| GMP synthase, large subunit [Elusimicrobium minutum Pei191]
 gi|226738452|sp|B2KCS8|GUAA_ELUMP RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|186971339|gb|ACC98324.1| GMP synthase, large subunit [Elusimicrobium minutum Pei191]
          Length = 510

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 58/195 (29%), Gaps = 25/195 (12%)

Query: 1   MNDIIKKAPS------ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECR 53
           M   I            +   SGG DSS   +         +  +  D G     + E  
Sbjct: 201 MTASIAAMKKQIGKGHVICGLSGGVDSSVVAALLAKAIGKNLYCIYVDTGLLRTGDRERT 260

Query: 54  LCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
             + KK+     K    + +   L L  L  ++     + +   +            ++ 
Sbjct: 261 EGLAKKL-----KVNLKIVDAEKLFLTKLAGVTDPEKKRKIIGALFIEVFEKEAKKFKDA 315

Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
            FL         +   ++                 D I++      L  + ++ +  PL 
Sbjct: 316 QFLAQGTLYPDVIESMSV-------------KGPSDVIKSHHNVGGLPEKMNLKLVEPLR 362

Query: 174 WLKKYETWKLAQDIG 188
           +L K E   L +++G
Sbjct: 363 FLFKDEVRALGRELG 377


>gi|163732978|ref|ZP_02140422.1| argininosuccinate synthase [Roseobacter litoralis Och 149]
 gi|161393513|gb|EDQ17838.1| argininosuccinate synthase [Roseobacter litoralis Och 149]
          Length = 406

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 58/203 (28%), Gaps = 13/203 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W   +    V T + D GQ  ++E         +++  
Sbjct: 1   MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEPARAKA---EMMGA 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + + + E+ +            +      + +   ++    +  R +         A
Sbjct: 58  SDIYIEDVREEFVRDFVF---PMFRANAVYEGLYLLGTSIARPLISKRLVEIAEETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              G T         + + Y       + A     +L   + +          K +    
Sbjct: 115 IAHGATGKGNDQVRFELAAYALNPDIKVIAPWREWDLSSRTKLIDFAE-----KNQIPIA 169

Query: 184 AQDIGGQDLVNLILEESHTCYLG 206
               G      +     HT   G
Sbjct: 170 KDKRGEAPFS-VDANLLHTSSEG 191


>gi|110677812|ref|YP_680819.1| argininosuccinate synthase [Roseobacter denitrificans OCh 114]
 gi|119361317|sp|Q16D10|ASSY_ROSDO RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|109453928|gb|ABG30133.1| argininosuccinate synthase [Roseobacter denitrificans OCh 114]
          Length = 406

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 58/203 (28%), Gaps = 13/203 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W   +    V T + D GQ  ++E         +++  
Sbjct: 1   MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEPARAKA---EMMGA 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + + + E+ +            +      + +   ++    +  R +         A
Sbjct: 58  SDIYIEDVREEFVRDFVF---PMFRANAVYEGLYLLGTSIARPLISKRLVEIAEETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              G T         + + Y       + A     +L   + +          K +    
Sbjct: 115 IAHGATGKGNDQVRFELAAYALNPDIKVIAPWREWDLSSRTKLIDFAE-----KNQIPIA 169

Query: 184 AQDIGGQDLVNLILEESHTCYLG 206
               G      +     HT   G
Sbjct: 170 KDKRGEAPFS-VDANLLHTSSEG 191


>gi|34497449|ref|NP_901664.1| argininosuccinate synthase [Chromobacterium violaceum ATCC 12472]
 gi|44887696|sp|Q7NWJ5|ASSY_CHRVO RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|34103304|gb|AAQ59666.1| argininosuccinate synthase [Chromobacterium violaceum ATCC 12472]
          Length = 408

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 46/173 (26%), Gaps = 5/173 (2%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  +VE          +   
Sbjct: 1   MSDIKKVVLAYSGGLDTSVILKWLQDEYQCEVVTFTADIGQGEEVEP--ARQKAVSLGIK 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                     +  +           + T      +   ++    +  R I         A
Sbjct: 59  PENIFIEDLREEFV--RDFVYPMFRANTIYEGEYLLGTSIARPLIAKRQIEIANQVGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
              G T         +   Y       + A     +L     +  +     + 
Sbjct: 117 VSHGATGKGNDQVRFELGYYALKPDVKVIAPWREWDLLSREKLLAYAETHGID 169


>gi|308446824|ref|XP_003087270.1| hypothetical protein CRE_21709 [Caenorhabditis remanei]
 gi|308258149|gb|EFP02102.1| hypothetical protein CRE_21709 [Caenorhabditis remanei]
          Length = 199

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 23/61 (37%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              + FSGG D+S  L W   +       + + GQ ++ + +      +    +  +  
Sbjct: 15 KKVGIAFSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPRKAENYGAVKARLV 74

Query: 69 D 69
          D
Sbjct: 75 D 75


>gi|262278275|ref|ZP_06056060.1| tRNA-specific 2-thiouridylase mnmA [Acinetobacter calcoaceticus
           RUH2202]
 gi|262258626|gb|EEY77359.1| tRNA-specific 2-thiouridylase mnmA [Acinetobacter calcoaceticus
           RUH2202]
          Length = 377

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 45/166 (27%), Gaps = 5/166 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS   +  L +  +VE L     + +     C     + + +    
Sbjct: 1   MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGLFMKNWEEDDGTEYC--TAMEDLADAQAV 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H    A         + +    +      PN  +     I        A  L
Sbjct: 59  ADKIGIKLHT---ANFAMEYWDRVFELFLAEYAAGRTPNPDILCNKEIKFRAFLDHAITL 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
           G   I  G          + + +    +   ++   +    +H   
Sbjct: 116 GADFIATGHYARRGETAYNSKGEAYAPLLRGVDNNKDQTYFLHAVH 161


>gi|262197371|ref|YP_003268580.1| Queuosine synthesis-like protein [Haliangium ochraceum DSM 14365]
 gi|262080718|gb|ACY16687.1| Queuosine synthesis-like protein [Haliangium ochraceum DSM 14365]
          Length = 296

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/250 (12%), Positives = 62/250 (24%), Gaps = 52/250 (20%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
           +  I++     L+ FSGG DS+  L  A D        L+       + E+E    +  +
Sbjct: 23  LRGIVRGYGRVLVAFSGGVDSAFLLKIASDELGADCHALTCVSVTMARSEVEDARALGDE 82

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +              H++    L     +                      R +   +  
Sbjct: 83  LGLAER--------HHVVESNELEQPGFADN----PTHRCALCKTELMDVARPLAEQLGV 130

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
             +A    I ++         +     R   + A                     L K +
Sbjct: 131 EVIAIGTNIDDLGDFRPGIAAAKERAARMPMVEA--------------------GLSKAD 170

Query: 180 TWKLAQDIG---------GQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
              L++ +G                      T        R    +         LR  G
Sbjct: 171 IRALSRQLGLRTWDKPQLACLSSRFPYGTKIT----PERLRRVDAFEDG------LRALG 220

Query: 231 WMEFKEKYQD 240
           + + + ++ D
Sbjct: 221 FRQLRVRFHD 230


>gi|163754832|ref|ZP_02161953.1| argininosuccinate synthetase [Kordia algicida OT-1]
 gi|161324899|gb|EDP96227.1| argininosuccinate synthetase [Kordia algicida OT-1]
          Length = 398

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 5  IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
          +K     +L +SGG D S   +  + D    V  +S + G   + E++       K+ 
Sbjct: 1  MKTPKKLVLAYSGGLDTSYCAVHLSKDLHFEVHAVSINTGGFTQKEIKKIEENAYKMG 58


>gi|189036221|sp|A9KE87|MNMA_COXBN RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 362

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 47/179 (26%), Gaps = 10/179 (5%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS       ++   V  L     + +  +  C     + + +            
Sbjct: 14  LSGGVDSSVAALVLKEKGYEVIGLFMQNWETDSKDPFC--TAEQDLSDAKAIADHIGIPL 71

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
           +++  +      +      +    Q           R  I        A +LG T++  G
Sbjct: 72  YVVNFS--KAYWNHVFQHCLDEFAQGRTPNPDVWCNRE-IKFKSLLDHAKKLGATHLATG 128

Query: 135 VCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                 +   + R                 L          P+   +K E   +A+  G
Sbjct: 129 HYACIQNENNEYRLLKSNDSHKDQSYFLHLLNQYQLANSVFPIGGYQKSEVRAIAKKRG 187


>gi|328947275|ref|YP_004364612.1| tRNA-specific 2-thiouridylase mnmA [Treponema succinifaciens DSM
           2489]
 gi|328447599|gb|AEB13315.1| tRNA-specific 2-thiouridylase mnmA [Treponema succinifaciens DSM
           2489]
          Length = 406

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 18/186 (9%), Positives = 49/186 (26%), Gaps = 12/186 (6%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK---------VELECR 53
           ++ KK    ++  SGG DS+       ++   V  ++    Q             +    
Sbjct: 12  ELPKKGDRVVVGLSGGVDSTMTAMLLKEKGCDVTCVTMSLWQEADLNLPDDYKIPDSCYS 71

Query: 54  LCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
               + I E      +      ++ +    +     + +    + ++   PN  +     
Sbjct: 72  PKEVEDIEENRKFCAEQGIPYVVVDV---KEKYQQEVIEYFKREYRNGRTPNPCIRCNRF 128

Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
           I      +    LGI            +         +     + +   +         +
Sbjct: 129 IKFGAMLSGLKDLGIEYDYFCTGHYAKAVRGTEPLFLVYGENASKDERGKCRPVQIHTAL 188

Query: 174 WLKKYE 179
            + K +
Sbjct: 189 DITKDQ 194


>gi|229086959|ref|ZP_04219116.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus Rock3-44]
 gi|228696335|gb|EEL49163.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus Rock3-44]
          Length = 376

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 54/194 (27%), Gaps = 13/194 (6%)

Query: 3   DIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           D++ K P     ++  SGG DSS       ++   V  +             C     + 
Sbjct: 4   DMMNKLPHETRVVIGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVC--TATED 61

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
             +++          + +            +      + +    PN  V     I     
Sbjct: 62  YNDVIEVCNQIGIPYYAVN---FEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAF 118

Query: 120 ATLAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
              A  LG   +  G           Y   R       +T     L  E       PL  
Sbjct: 119 LEHAIALGADYVATGHYARVAYIDGEYKMLRGVDDNKDQTYFLNQLSQEQLSKTMFPLGE 178

Query: 175 LKKYETWKLAQDIG 188
           LKK +  ++A++ G
Sbjct: 179 LKKPQIREMAKEAG 192


>gi|224437605|ref|ZP_03658558.1| GMP synthase [Helicobacter cinaedi CCUG 18818]
 gi|313144055|ref|ZP_07806248.1| GMP synthase [Helicobacter cinaedi CCUG 18818]
 gi|313129086|gb|EFR46703.1| GMP synthase [Helicobacter cinaedi CCUG 18818]
          Length = 583

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 47/189 (24%), Gaps = 15/189 (7%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K     L   SGG DSS           + +  +  D G   K E E    + K+     
Sbjct: 281 KPTQKVLCAVSGGVDSSVVAILLYRAIGENLIPVFVDTGLLRKGEREAVEAMFKE----- 335

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
               +      +     L       +T+    +                           
Sbjct: 336 ----NLKVPLIVADARELFLRRLKGVTEPEQKRKIIGETFIEVFEAEAKKHNTKGEIKFL 391

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G         +   S        TI++      L       +  PL  L K E   L 
Sbjct: 392 AQG-----TLYPDVIESVSVKGPSKTIKSHHNVGGLPEWMKFELIEPLRELFKDEVRALG 446

Query: 185 QDIGGQDLV 193
           +++G  + +
Sbjct: 447 RELGMPESM 455


>gi|212218582|ref|YP_002305369.1| tRNA-specific 2-thiouridylase MnmA [Coxiella burnetii CbuK_Q154]
 gi|259495827|sp|B6J7H5|MNMA_COXB1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|212012844|gb|ACJ20224.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Coxiella burnetii CbuK_Q154]
          Length = 371

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 47/179 (26%), Gaps = 10/179 (5%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS       ++   V  L     + +  +  C     + + +            
Sbjct: 23  LSGGVDSSVAALVLKEKGYEVIGLFMQNWETDSKDPFC--TAEQDLSDAKAIADHIGIPL 80

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
           +++  +      +      +    Q           R  I        A +LG T++  G
Sbjct: 81  YVVNFS--KAYWNHVFQHCLDEFAQGRTPNPDVWCNRE-IKFKSLLDHAKKLGATHLATG 137

Query: 135 VCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                 +   + R                 L          P+   +K E   +A+  G
Sbjct: 138 HYACIQNENNEYRLLKSNDSHKDQSYFLHLLNQYQLANSVFPIGGYQKSEVRAIAKKRG 196


>gi|205822400|sp|Q030C8|MNMA_LACLS RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 376

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 49/194 (25%), Gaps = 11/194 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+         ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSGKSPAQTRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDENGVC--TATEDY 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 59  KDVAAVADQIGVPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 115

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMW 174
             A  LG   +  G      +      H    A          S +          PL  
Sbjct: 116 DYAMELGADYVATGHYAQVRTDEDGTVHMLRGADNNKDQTYFLSQLTQEQLKKTMFPLGH 175

Query: 175 LKKYETWKLAQDIG 188
           L+K E  ++A+  G
Sbjct: 176 LEKPEVRRIAEKAG 189


>gi|153208378|ref|ZP_01946716.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Coxiella burnetii 'MSU Goat Q177']
 gi|120576035|gb|EAX32659.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Coxiella burnetii 'MSU Goat Q177']
          Length = 362

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 47/179 (26%), Gaps = 10/179 (5%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS       ++   V  L     + +  +  C     + + +            
Sbjct: 14  LSGGVDSSVAALVLKEKGYEVIGLFMQNWETDSKDPFC--TAEQDLSDAKAIADHIGIPL 71

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
           +++  +      +      +    Q           R  I        A +LG T++  G
Sbjct: 72  YVVNFS--KAYWNHVFQHCLDEFAQGRTPNPDVWCNRE-IKFKSLLDHAKKLGATHLATG 128

Query: 135 VCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                 +   + R                 L          P+   +K E   +A+  G
Sbjct: 129 HYACIQNENNEYRLLKSNDSHKDQSYFLHLLNQYQLANSVFPIGGYQKSEVRAIAKKRG 187


>gi|83950756|ref|ZP_00959489.1| argininosuccinate synthase [Roseovarius nubinhibens ISM]
 gi|83838655|gb|EAP77951.1| argininosuccinate synthase [Roseovarius nubinhibens ISM]
          Length = 408

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 20/157 (12%), Positives = 44/157 (28%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W   +    V T + D GQ  +++        + +   
Sbjct: 1   MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELDP--ARKKAELLGIN 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +         +        +   ++    +  R +         A
Sbjct: 59  PDNI--YIEDIREEFVRDFVFPMFRANALYEGQYLLGTSIARPLISKRLVEIAAETGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         + + Y       + A     +L
Sbjct: 117 VAHGATGKGNDQVRFELAAYALNPDIKVIAPWREWDL 153


>gi|118581572|ref|YP_902822.1| argininosuccinate synthase [Pelobacter propionicus DSM 2379]
 gi|166221001|sp|A1ATU4|ASSY_PELPD RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|118504282|gb|ABL00765.1| argininosuccinate synthase [Pelobacter propionicus DSM 2379]
          Length = 408

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 58/206 (28%), Gaps = 11/206 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
           M        + +L +SGG D+S  L W  +    RV   S D GQ  +++      +   
Sbjct: 1   MTQQKMDIKNVVLAYSGGLDTSIILKWLKNEYGCRVVAFSADLGQGEELDPVREKALA-- 58

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                      + +     +         +        +   ++    +  R +      
Sbjct: 59  ----TGADVVYIDDLREEFVRDFVFPMFRANAIYEGHYLLGTSIARPLIAKRQMEIAAKE 114

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP----LMWL 175
              A   G T         +   Y    +  I A     +L     +  +       + +
Sbjct: 115 GCDAVSHGSTGKGNDQVRFELGYYHFNPNIKIVAPWRTWDLNSRQALIDYAKKNGIPVPV 174

Query: 176 KKYETWKLAQDIGGQDLVNLILEESH 201
            K   W   +++        ILE++ 
Sbjct: 175 TKKRPWSSDRNLLHISFEGGILEDTW 200


>gi|317052362|ref|YP_004113478.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Desulfurispirillum indicum S5]
 gi|316947446|gb|ADU66922.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Desulfurispirillum indicum S5]
          Length = 345

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 42/193 (21%), Gaps = 15/193 (7%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG---QRNKVELECRLCVRKKI 60
           +       L+  SGG DSS      L++   VE          Q ++  +     V +  
Sbjct: 1   MNVPRKKVLVAMSGGVDSSMTTKLLLEQGYPVEGCYMKLHGNEQMHEQNIARVERVARYF 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                           +    +             +  Q           R I F     
Sbjct: 61  NIPWHVLDRQDLFHQSVYQPFI------------DIYSQGQTPNPCTFCNRLIKFGTLFE 108

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
                           + D                   N+       +  PL   +K + 
Sbjct: 109 FARELDCHHLATGHYVKCDGQYIYQGDDPGKDQSYFLFNIEPRIIPHLLFPLGSWRKSDV 168

Query: 181 WKLAQDIGGQDLV 193
             +A DI     +
Sbjct: 169 KAMAADIPLLASL 181


>gi|269103243|ref|ZP_06155940.1| thiamine biosynthesis protein ThiI [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163141|gb|EEZ41637.1| thiamine biosynthesis protein ThiI [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 482

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 56/183 (30%), Gaps = 27/183 (14%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV-RKKIVELMPKWKD 69
            L L SGG DS       + R  +V    F+ G            +  K++   +     
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGP-------AHEIGVKQVSHFLWNKYG 232

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           S  +   + +            + V  +I +             +F+  A  +A   GI 
Sbjct: 233 SSAKVKFIAVDF----------EPVVAEILEKVDDGQMGVVLKRMFMRAAGQVAEHFGIQ 282

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      S         I  +   +         +  PL+   K +   +A+ IG 
Sbjct: 283 ALVTGEALGQVSSQTLTNLRHIDGVTDTL---------ILRPLINWDKEDIINMARHIGT 333

Query: 190 QDL 192
           +D 
Sbjct: 334 EDF 336


>gi|256823496|ref|YP_003147459.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Kangiella koreensis DSM 16069]
 gi|256797035|gb|ACV27691.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Kangiella koreensis DSM 16069]
          Length = 362

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 54/179 (30%), Gaps = 8/179 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ---RNKVELECRLCVRKKIVE 62
           +K   A+ L SGG DS        ++   VE ++F  G     +   +  +   ++K   
Sbjct: 15  QKQRKAVALISGGLDSLLAAKVIQEQGIHVEGINFYTGFCVEGHTHAIRKKDKDKQKRNN 74

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
            +   +    + HI+ ++                     NL         ++    A   
Sbjct: 75  SLWVAEQLGIKLHIIDIS-----EEYKDIVLNPKHGYGANLNPCLDCKIFMVNQAQAWAW 129

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           A   G   I+ G                I A E+  +  +   +     +  L + E W
Sbjct: 130 AEENGFDFIITGEVIGQRPKSQRKETMPIIARESGADDRLLRPLCAKNLMPTLPEREGW 188


>gi|254492519|ref|ZP_05105691.1| argininosuccinate synthase [Methylophaga thiooxidans DMS010]
 gi|224462411|gb|EEF78688.1| argininosuccinate synthase [Methylophaga thiooxydans DMS010]
          Length = 403

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 52/158 (32%), Gaps = 9/158 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + K    +L +SGG D+S  L W  D++D  V T + D GQ  +VE          I E+
Sbjct: 1   MSKINKVVLAYSGGLDTSVILKWLQDKYDSEVVTFTADLGQGEEVEPARAKAKSLGIKEI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                ++    D++ P+     I         ++           +  R +         
Sbjct: 61  FIEDLREEFARDYVFPMFRANAIYEGEYLLGTSIARP-------LIAKRLVEIARETGAE 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         +   Y    +  + A     +L
Sbjct: 114 AVSHGATGKGNDQVRFELGAYALNPNIKVIAPWREWDL 151


>gi|167772092|ref|ZP_02444145.1| hypothetical protein ANACOL_03466 [Anaerotruncus colihominis DSM
           17241]
 gi|167665890|gb|EDS10020.1| hypothetical protein ANACOL_03466 [Anaerotruncus colihominis DSM
           17241]
          Length = 349

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 52/198 (26%), Gaps = 21/198 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMP 65
              + L+  SGG DSS        +   V   +F+ +    +  +     V   +     
Sbjct: 1   MERTVLVAMSGGVDSSVAALLLKRQGYEVAGATFELFNGCPEGNVRDARAVCDCLG---- 56

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    ++     L          +          PN  V     +        A R
Sbjct: 57  ------IRHYVFDYRALFQKRVLEHFVDS---YLTGKTPNPCVACNRSVKFGAFLQDAMR 107

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETA-------INLGMESHVTVHTPLMWLKKY 178
           LG T+I  G            R+   R+ +T         +L  E    +  P+    K 
Sbjct: 108 LGYTHISTGHYAGVAYDQTAGRYCLQRSRQTRKDQSYVLYHLSQEQLSRLLLPVDGYTKD 167

Query: 179 ETWKLAQDIGGQDLVNLI 196
           E    A + G        
Sbjct: 168 EVRAFAAEAGLPVQAKAD 185


>gi|212212452|ref|YP_002303388.1| tRNA-specific 2-thiouridylase MnmA [Coxiella burnetii CbuG_Q212]
 gi|215919120|ref|NP_820145.2| tRNA-specific 2-thiouridylase MnmA [Coxiella burnetii RSA 493]
 gi|259495828|sp|B6IZW5|MNMA_COXB2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|206584005|gb|AAO90659.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Coxiella burnetii RSA 493]
 gi|212010862|gb|ACJ18243.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Coxiella burnetii CbuG_Q212]
          Length = 371

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 47/179 (26%), Gaps = 10/179 (5%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS       ++   V  L     + +  +  C     + + +            
Sbjct: 23  LSGGVDSSVAALVLKEKGYEVIGLFMQNWETDSKDPFC--TAEQDLSDAKAIADHIGIPL 80

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
           +++  +      +      +    Q           R  I        A +LG T++  G
Sbjct: 81  YVVNFS--KAYWNHVFQHCLDEFAQGRTPNPDVWCNRE-IKFKSLLDHAKKLGATHLATG 137

Query: 135 VCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                 +   + R                 L          P+   +K E   +A+  G
Sbjct: 138 HYACIQNENNEYRLLKSNDSHKDQSYFLHLLNQYQLANSVFPIGGYQKSEVRAIAKKRG 196


>gi|284052412|ref|ZP_06382622.1| GMP synthase [Arthrospira platensis str. Paraca]
 gi|291570501|dbj|BAI92773.1| GMP synthase (glutamine-hydrolyzing) [Arthrospira platensis
           NIES-39]
          Length = 541

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 54/186 (29%), Gaps = 11/186 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST          D++  +  D G   K E E    + K   +     
Sbjct: 238 KRVLLALSGGVDSSTLAFLLHQAIGDQLTCMFIDQGFMRKYEPE---KLVKLFDDRFHIS 294

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            + +         + G         +   K +        V       L     LA    
Sbjct: 295 VEYVNARDRFLEQLKG-------VTDPEEKRKRIGGEFIRVFEEESARLGPFDYLAQGTL 347

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +++            +     I++      L  +    +  PL  L K E  K+ + I
Sbjct: 348 YPDVIESADTNVDPKTGERVAVKIKSHHNVGGLPKDLRFKLVEPLRKLFKDEVRKVGRSI 407

Query: 188 GGQDLV 193
           G  + +
Sbjct: 408 GLPEEI 413


>gi|284992813|ref|YP_003411367.1| GMP synthase large subunit [Geodermatophilus obscurus DSM 43160]
 gi|284066058|gb|ADB76996.1| GMP synthase, large subunit [Geodermatophilus obscurus DSM 43160]
          Length = 520

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 57/185 (30%), Gaps = 11/185 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            AL   SGG DS+   +       DR+  +  D+G   + E E          ++   + 
Sbjct: 217 RALCALSGGVDSAVAAALVQRAIGDRLTCVYVDHGLMREGETE----------QIERDFV 266

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G D  +  A    +   +   +   K +        V  +  + +V  A        
Sbjct: 267 AVTGADLRVVDAREQFLGALAGISDPEQKRKTIGREFIRVFEQAALDVVADAKAHGETVD 326

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +   T+  PL  L K E  ++   +G
Sbjct: 327 FLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPEDLTFTLVEPLRTLFKDEVREVGLQLG 386

Query: 189 GQDLV 193
             + +
Sbjct: 387 LPESL 391


>gi|81628239|sp|Q820W2|MNMA_COXBU RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 362

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 47/179 (26%), Gaps = 10/179 (5%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS       ++   V  L     + +  +  C     + + +            
Sbjct: 14  LSGGVDSSVAALVLKEKGYEVIGLFMQNWETDSKDPFC--TAEQDLSDAKAIADHIGIPL 71

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
           +++  +      +      +    Q           R  I        A +LG T++  G
Sbjct: 72  YVVNFS--KAYWNHVFQHCLDEFAQGRTPNPDVWCNRE-IKFKSLLDHAKKLGATHLATG 128

Query: 135 VCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                 +   + R                 L          P+   +K E   +A+  G
Sbjct: 129 HYACIQNENNEYRLLKSNDSHKDQSYFLHLLNQYQLANSVFPIGGYQKSEVRAIAKKRG 187


>gi|299769236|ref|YP_003731262.1| tRNA-specific 2-thiouridylase MnmA [Acinetobacter sp. DR1]
 gi|298699324|gb|ADI89889.1| tRNA-specific 2-thiouridylase MnmA [Acinetobacter sp. DR1]
          Length = 377

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 45/166 (27%), Gaps = 5/166 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS   +  L +  +VE L     + +     C     + + +    
Sbjct: 1   MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGLFMKNWEEDDGTEYC--TAMEDLADAQAV 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H    A         + +    +      PN  +     I        A  L
Sbjct: 59  ADKIGIKLHT---ANFAMEYWDRVFELFLAEYAAGRTPNPDILCNKEIKFRAFLDHAMTL 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
           G   I  G          + + +    +   ++   +    +H   
Sbjct: 116 GADFIATGHYARRGETAYNSKGEAYAPLLRGVDNNKDQTYFLHAVH 161


>gi|262375961|ref|ZP_06069192.1| argininosuccinate synthase [Acinetobacter lwoffii SH145]
 gi|262309055|gb|EEY90187.1| argininosuccinate synthase [Acinetobacter lwoffii SH145]
          Length = 446

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 23/61 (37%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              + FSGG D+S  L W   +       + + GQ ++ + +      +    +  +  
Sbjct: 15 KKVGIAFSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEAYGAVKARLI 74

Query: 69 D 69
          D
Sbjct: 75 D 75


>gi|251793304|ref|YP_003008032.1| tRNA-specific 2-thiouridylase MnmA [Aggregatibacter aphrophilus
           NJ8700]
 gi|247534699|gb|ACS97945.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Aggregatibacter aphrophilus NJ8700]
          Length = 384

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 34/140 (24%), Gaps = 4/140 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 +   SGG DSS        +  +VE L     + +     C       + +   
Sbjct: 22  NATKKVICGMSGGVDSSVSAFILQQQGYQVEGLFMKNWEEDDDTDYC--TAAADLEDAQA 79

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  + H +      +   +     +             +  + I F  F    A  
Sbjct: 80  VCDKLGIKLHKIN--FAAEYWDNVFEHFLNEYKAGRTPNPDILCNKEIKFKAFLEYAAED 137

Query: 126 LGITNIVIGVCETDYSGYPD 145
           LG   I  G          +
Sbjct: 138 LGANYIATGHYVRRRGADDN 157


>gi|108805668|ref|YP_645605.1| argininosuccinate synthase [Rubrobacter xylanophilus DSM 9941]
 gi|119361318|sp|Q1AS35|ASSY_RUBXD RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|108766911|gb|ABG05793.1| argininosuccinate synthase [Rubrobacter xylanophilus DSM 9941]
          Length = 409

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 22/53 (41%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          +      +L +SGG D+S CL W  ++      L  D GQ    E      +R
Sbjct: 1  MLGGKKVVLAYSGGLDTSVCLKWFEEQGAEPYALYLDLGQGEPAEDVREKALR 53


>gi|294814542|ref|ZP_06773185.1| GMP synthase [Streptomyces clavuligerus ATCC 27064]
 gi|294327141|gb|EFG08784.1| GMP synthase [Streptomyces clavuligerus ATCC 27064]
          Length = 551

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/187 (11%), Positives = 50/187 (26%), Gaps = 11/187 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              A+   SGG DS+   +        ++  +  D+G   K E E               
Sbjct: 246 TKRAICGLSGGVDSAVAAALVQKAIGSQLTCVYVDHGLMRKGETEQVEK---------DF 296

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +  +  ++        + + ++     +                  +   +     +
Sbjct: 297 VAATGVQLKVVDAEERFLAALAGVSDPEEKRKIIGREFIRVFEQAQAEIVAEGSADGEEV 356

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +               I++      L  +    +  PL  L K E   + Q+
Sbjct: 357 -AFLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPEDLEFQLVEPLRQLFKDEVRMVGQE 415

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 416 LGLPDEI 422


>gi|224824999|ref|ZP_03698105.1| Argininosuccinate synthase [Lutiella nitroferrum 2002]
 gi|224602670|gb|EEG08847.1| Argininosuccinate synthase [Lutiella nitroferrum 2002]
          Length = 406

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 49/160 (30%), Gaps = 11/160 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVR---KKI 60
           +      +L +SGG D+S  L W  D +   V T + D GQ  +VE   +  V    K+ 
Sbjct: 1   MSDIKKVVLAYSGGLDTSVILKWLQDTYQCEVVTFTADIGQGEEVEPARKKAVALGIKQE 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
              +   ++    D + P+     I         ++           +  R I       
Sbjct: 61  NIFIDDLREEFVRDFVFPMFRANAIYEGEYLLGTSIARP-------LIAKRQIEIANQTG 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
             A   G T         +   Y       + A     +L
Sbjct: 114 ADAVSHGATGKGNDQVRFELGYYALKPDVKVIAPWREWDL 153


>gi|220935011|ref|YP_002513910.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996321|gb|ACL72923.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thioalkalivibrio sp. HL-EbGR7]
          Length = 364

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 50/197 (25%), Gaps = 10/197 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      ++  SGG DSS      +    RVE L     + +     C     + + +  
Sbjct: 1   MSGPRHIIVGMSGGVDSSVAALLLIQAGYRVEGLFMKNWEEDDEPGYCA--AAEDLADAK 58

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +      H +            +  +   + Q    PN  +     I        A 
Sbjct: 59  AVCEVLEIPLHKVN---FSADYWHRVFSHFLDEYQAGRTPNPDILCNKEIKFRAFLDYAR 115

Query: 125 RLGITNIVIGVCETDYSGYPDC-----RHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           +LG   I  G                 R            LG E       P+  L+K  
Sbjct: 116 QLGADGIATGHYARIGRDGESYTLLAGRDANKDQTYFLYTLGQEQLSKSLFPIGELEKPR 175

Query: 180 TWKLAQDIGGQDLVNLI 196
              LA+  G        
Sbjct: 176 VRDLARAHGLPVFAKKD 192


>gi|254392021|ref|ZP_05007212.1| GMP synthase [Streptomyces clavuligerus ATCC 27064]
 gi|326442932|ref|ZP_08217666.1| GMP synthase [Streptomyces clavuligerus ATCC 27064]
 gi|197705699|gb|EDY51511.1| GMP synthase [Streptomyces clavuligerus ATCC 27064]
          Length = 528

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/187 (11%), Positives = 50/187 (26%), Gaps = 11/187 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              A+   SGG DS+   +        ++  +  D+G   K E E               
Sbjct: 223 TKRAICGLSGGVDSAVAAALVQKAIGSQLTCVYVDHGLMRKGETEQVEK---------DF 273

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +  +  ++        + + ++     +                  +   +     +
Sbjct: 274 VAATGVQLKVVDAEERFLAALAGVSDPEEKRKIIGREFIRVFEQAQAEIVAEGSADGEEV 333

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +               I++      L  +    +  PL  L K E   + Q+
Sbjct: 334 -AFLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPEDLEFQLVEPLRQLFKDEVRMVGQE 392

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 393 LGLPDEI 399


>gi|94969297|ref|YP_591345.1| tRNA-specific 2-thiouridylase MnmA [Candidatus Koribacter
           versatilis Ellin345]
 gi|189036216|sp|Q1IPC9|MNMA_ACIBL RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|94551347|gb|ABF41271.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Koribacter versatilis Ellin345]
          Length = 370

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 53/203 (26%), Gaps = 18/203 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELE-------CRLCV 56
           + K+ +  +  SGG DSST  +        +  L+   + QR     E        R C 
Sbjct: 1   MNKSETIAVAMSGGVDSSTVAAMLRAEGYNLVGLTMQLWNQRRLAHHEGFGEPGVGRCCS 60

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
              + +     +      +++            + K           P       N +  
Sbjct: 61  LDDVYDARRVAETLAIPYYVVNQED---RFERDVVKPFVEDYLSGRTPIPCSLCNNHLKF 117

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVH 169
                 A ++G   I  G    +       R                   L  E      
Sbjct: 118 DQLLRTAQQIGAEKIATGHYARNDFNAQTGRWELKRPADRAKDQTYFLFGLTQEQLSRTL 177

Query: 170 TPLMWLKKYETWKLAQDIGGQDL 192
            PL    K E  + A++ G +  
Sbjct: 178 FPLGHKTKPEVREDAKNHGLKLF 200


>gi|289450302|ref|YP_003475437.1| putative UDP-N-acetylmuramoylalanine--D-glutamate ligase
           [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289184849|gb|ADC91274.1| putative UDP-N-acetylmuramoylalanine--D-glutamate ligase
           [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 1019

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 64/226 (28%), Gaps = 30/226 (13%)

Query: 1   MNDIIKKAPS-ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           MN + +K     L+   GG+DS+  L++      R   L+ +        +E      K 
Sbjct: 152 MNKLEEKNVREVLVPVGGGKDSAVSLAFLKAAGYRCHALAINANAAVLGTIEVAGLTEKT 211

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           ++    +  + +          L +    +     +  +   +L   ++     I L   
Sbjct: 212 LI--SRQLDEKMLR--------LNEEGFLNGHTPFSAIVAFESLLAAYLYDIRDIALSNE 261

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            +             +  T  +       +  R  +  I   +       + L  L +  
Sbjct: 262 RSANEA--------SIIGTKINHQYSKSGEFEREFQGYIEQQIGLPQRYFSLLRPLSEIA 313

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACY 225
             K    +     V       H+C  G +      G  C  C  C 
Sbjct: 314 IAKHFAALAEFHPVF------HSCNRGSKK-----GVWCGKCAKCL 348


>gi|262306091|gb|ACY45638.1| gln amidotransferase [Polyzonium germanicum]
          Length = 197

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 2/62 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              L++ SGG DS+ C +      + D+V  L  D G   K E E       KI      
Sbjct: 44  NKVLMMLSGGVDSTVCAALLNKALKADQVIALHIDNGFMRKGESEEVANNLAKIGLKTRV 103

Query: 67  WK 68
             
Sbjct: 104 LN 105


>gi|149204363|ref|ZP_01881330.1| argininosuccinate synthase [Roseovarius sp. TM1035]
 gi|149142248|gb|EDM30295.1| argininosuccinate synthase [Roseovarius sp. TM1035]
          Length = 408

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 20/157 (12%), Positives = 44/157 (28%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W   +    V T + D GQ  +++        + +   
Sbjct: 1   MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELDP--ARQKAEILGIK 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                     +  +           +      + +   ++    +  R +         A
Sbjct: 59  PENIYIEDVREEFV--RDFVFPMFRANALYEGLYLLGTSIARPLISKRLVEIAAMTGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         + + Y       + A     +L
Sbjct: 117 VAHGATGKGNDQVRFELAAYALNPDIKVIAPWRLWDL 153


>gi|126734425|ref|ZP_01750172.1| argininosuccinate synthase [Roseobacter sp. CCS2]
 gi|126717291|gb|EBA14155.1| argininosuccinate synthase [Roseobacter sp. CCS2]
          Length = 404

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 54/178 (30%), Gaps = 11/178 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W   +    V T + D GQ  ++E        +K  E+
Sbjct: 1   MTAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEP------ARKKAEM 54

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           M      + +     +         +      + +   ++    +  R +         A
Sbjct: 55  MGATGIYIEDLREEFVRDFVFPMFRANALYEGLYLLGTSIARPLISKRLVEIAEAEGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV----TVHTPLMWLKK 177
              G T         + + Y       + A     +LG  + +      H   +   K
Sbjct: 115 ISHGATGKGNDQIRFELAAYALNPEIKVVAPWREWDLGSRTKLIEFAEKHQIPIAKDK 172


>gi|34558441|ref|NP_908256.1| argininosuccinate synthase [Wolinella succinogenes DSM 1740]
 gi|44887688|sp|Q7M7P6|ASSY_WOLSU RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|34484160|emb|CAE11156.1| ARGININOSUCCINATE SYNTHASE CITRULLINE--ASPARTATELIGASE [Wolinella
          succinogenes]
          Length = 404

 Score = 51.5 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 4/80 (5%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCV---RKK 59
          + KK    +L +SGG D+S  L W  +++   V T + D GQ  +VE           K+
Sbjct: 1  MSKKINKIVLAYSGGLDTSVILKWLQEQYQCEVVTFTADIGQGEEVEPARAKAKLLGIKE 60

Query: 60 IVELMPKWKDSLGEDHILPL 79
              +   K+    D++ P+
Sbjct: 61 ENIFIKDLKEEFVRDYVFPM 80


>gi|33519851|ref|NP_878683.1| tRNA-specific 2-thiouridylase MnmA [Candidatus Blochmannia
           floridanus]
 gi|81657434|sp|Q7U353|MNMA_BLOFL RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|33504196|emb|CAD83458.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Blochmannia floridanus]
          Length = 369

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/184 (11%), Positives = 47/184 (25%), Gaps = 9/184 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS        +   VE L     + +  +  C     + + +      
Sbjct: 2   KKVIVGISGGVDSSVAAWLLQQQGYLVEGLFMKNWENDDEKEYCSSE--EDLSDAWSICN 59

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 H +      +   +     +             +  + I F  F       LG 
Sbjct: 60  TLKIPLHTVN--FAQEYWENVFQVFLQAYQSGFTPNPDVLCNKEIKFKHFLDFALEDLGA 117

Query: 129 TNI----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW-LKKYETWKL 183
             I     +               D  +     +    +  +      +  L K    K+
Sbjct: 118 DFIATGHYVRCMNVKKKITLMKGIDQNKDQSYFLYTLNQQQLKRCLFPIGSLTKLTVRKI 177

Query: 184 AQDI 187
           A+++
Sbjct: 178 AKEL 181


>gi|312881365|ref|ZP_07741162.1| argininosuccinate synthase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309371005|gb|EFP98460.1| argininosuccinate synthase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 403

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 57/196 (29%), Gaps = 2/196 (1%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K+A   L LFSGG DS+  L     +  +V  L  D G     E    L    +I   + 
Sbjct: 15  KRATHVLTLFSGGLDSTYLLELLKGQGVKVTALVVDLGSGVDTEHLTLLTNHYEIDLKIV 74

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             + +  E  I+       +  +    + ++           V        +       +
Sbjct: 75  DAQKNFIEHSIVSAIQAQAMYLNDYPISSSLSRPIIVSNAVKVANELGCDAILHTANQSQ 134

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
             +  I   +  + YSG+    ++            +     V      +   E     +
Sbjct: 135 NSLRRINGAIEASGYSGFYGSPYEYSAISREQKIEALFHSGLVGFKTRNVSGDENI-WCR 193

Query: 186 DIGGQDLVNLILEESH 201
           +     +++     + 
Sbjct: 194 EF-EAGVLDDPQSFTL 208


>gi|163737975|ref|ZP_02145391.1| Argininosuccinate synthase [Phaeobacter gallaeciensis BS107]
 gi|163742629|ref|ZP_02150015.1| argininosuccinate synthase [Phaeobacter gallaeciensis 2.10]
 gi|161384214|gb|EDQ08597.1| argininosuccinate synthase [Phaeobacter gallaeciensis 2.10]
 gi|161388591|gb|EDQ12944.1| Argininosuccinate synthase [Phaeobacter gallaeciensis BS107]
          Length = 408

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 44/157 (28%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W   +    V T + D GQ  ++E        + +   
Sbjct: 1   MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEP--ARQKAELLGIK 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                     +  +           +      + +   ++    +  R +         A
Sbjct: 59  PENIFIEDVREEFV--RDFVFPMFRANAVYEGLYLLGTSIARPLISKRLVEIAEATGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         + + Y       + A     +L
Sbjct: 117 VAHGATGKGNDQVRFELAAYALNPDIKVIAPWREWDL 153


>gi|161830166|ref|YP_001597021.1| tRNA-specific 2-thiouridylase MnmA [Coxiella burnetii RSA 331]
 gi|189040503|sp|A9NDN1|MNMA_COXBR RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|161762033|gb|ABX77675.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Coxiella burnetii RSA 331]
          Length = 362

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 47/179 (26%), Gaps = 10/179 (5%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS       ++   V  L     + +  +  C     + + +            
Sbjct: 14  LSGGVDSSVAALVLKEKGYEVIGLFMQNWETDSKDPFC--TAEQDLSDAKAIADHIGIPL 71

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
           +++  +      +      +    Q           R  I        A +LG T++  G
Sbjct: 72  YVVNFS--KAYWNHVFQHCLDEFAQGRTPNPDVWCNRE-IKFKSLLDHAKKLGATHLATG 128

Query: 135 VCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                 +   + R                 L          P+   +K E   +A+  G
Sbjct: 129 HYACIQNENNEYRLLKSNDSHKDQSYFLHLLNQYQLANSVFPIGGYQKSEVRAIAKKRG 187


>gi|34558197|ref|NP_908012.1| tRNA methyltransferase [Wolinella succinogenes DSM 1740]
 gi|34483916|emb|CAE10912.1| TRNA METHYLTRANSFERASE [Wolinella succinogenes]
          Length = 333

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 34/123 (27%), Gaps = 15/123 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL LFSGG DS   +    +    V  L F+ G             R K+  L      
Sbjct: 2   KALALFSGGLDSLLSMKLIQEMGIEVVALHFNIGFGAN---------RDKLEYLQNATAQ 52

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E  +L +            + +   +             +      A  L    G +
Sbjct: 53  IGVELRVLDI------QEQFFNEVLFNPVHGYGKYFNPCIDCHANMFRHALRLLEGEGAS 106

Query: 130 NIV 132
            I+
Sbjct: 107 FII 109


>gi|329957309|ref|ZP_08297829.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides clarus YIT 12056]
 gi|328523022|gb|EGF50125.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides clarus YIT 12056]
          Length = 388

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 38/140 (27%), Gaps = 18/140 (12%)

Query: 1   MN--DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           MN  ++ K     L+  SGG DS+       ++   +  L+         E      + +
Sbjct: 29  MNIREMNKIEKRVLVGMSGGIDSTATCLMLQEQGYEIIGLTMWVWGD---EPLEARQLAR 85

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
            +        +     +++    +              + +    PN  V    +     
Sbjct: 86  SMGIEHHVADEREAFRNVIVRNFI-------------DEYRQGRTPNPCVMCNPLFKFRI 132

Query: 119 AATLAYRLGITNIVIGVCET 138
               A +L    I  G    
Sbjct: 133 FTEWADKLNCRYIATGHYTR 152


>gi|298387127|ref|ZP_06996681.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides sp. 1_1_14]
 gi|298260277|gb|EFI03147.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides sp. 1_1_14]
          Length = 369

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 51/178 (28%), Gaps = 11/178 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +++    LL  SGG DSS      L+    V  ++F + + N              +E  
Sbjct: 1   MEENKRVLLGMSGGTDSSVAAMRLLEAGYEVTGVTFRFYELNDSTE---------YLEDA 51

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
               + LG  HI       +I    + +    +    + P       N +     + +A 
Sbjct: 52  RHLAERLGIRHI--TYDAREIFRKQIIEYFVREYMVGHTPVPCTLCNNYLKWPLLSKIAD 109

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
            +GI  I  G           C        +      +          M L   +  K
Sbjct: 110 EMGIFYIATGHYVRKVKVDDTCYITYAADSDKDQTFFLWGLKQDILRRMLLPMGDITK 167


>gi|260592231|ref|ZP_05857689.1| GMP synthase [Prevotella veroralis F0319]
 gi|260535865|gb|EEX18482.1| GMP synthase [Prevotella veroralis F0319]
          Length = 514

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 61/188 (32%), Gaps = 21/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS C +         +  +  D+G   K E +  +   K +      
Sbjct: 213 NDRVILGLSGGVDSSVCATLLNKAIGKNLTCIFVDHGMLRKNEFQKVMDAYKGLG----- 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                       L ++G  +     K++      +      + GR+ + +  A       
Sbjct: 268 ------------LNVIGVDASEKFFKDLEGV--SDPEEKRKIIGRDFVEVFNAEAKKIT- 312

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G    D           I++      L  E H+ +  PL WL K E  ++  +
Sbjct: 313 DAKWLAQGTIYPDRIESLSITGMVIKSHHNVGGLPKEMHLQLCEPLRWLFKDEVRRVGHE 372

Query: 187 IGGQDLVN 194
           +G  + + 
Sbjct: 373 MGMPERLI 380


>gi|157813140|gb|ABV81315.1| putative GMP synthetase [Narceus americanus]
          Length = 197

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 2/56 (3%)

Query: 8  APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
              L+L SGG DS+ C +      + D++  +  D G   K E      +  KI 
Sbjct: 43 NCKVLMLLSGGVDSTVCAALMWKALKEDQIIAIHIDNGFMRKEESRQVEQMLHKIG 98


>gi|295838491|ref|ZP_06825424.1| GMP synthase [Streptomyces sp. SPB74]
 gi|197699566|gb|EDY46499.1| GMP synthase [Streptomyces sp. SPB74]
          Length = 527

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 51/187 (27%), Gaps = 11/187 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              A+   SGG DS+   +        ++  +  D+G   K E E               
Sbjct: 222 TKRAICGLSGGVDSAVAAALVQRAIGSQLTCVYVDHGLMRKGETEQVEK---------DF 272

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +  +  ++  A     + + ++     +                  +   A     +
Sbjct: 273 VAATGVQLKVVDAAERFLDALAGVSDPEQKRKIIGREFIRVFEQAQAEIVAENAADGADV 332

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +               I++      L  +    +  PL  L K E   + Q+
Sbjct: 333 -AFLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPEDLEFELIEPLRKLFKDEVRAVGQE 391

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 392 LGLPDEI 398


>gi|320528367|ref|ZP_08029529.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Solobacterium moorei F0204]
 gi|320131281|gb|EFW23849.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Solobacterium moorei F0204]
          Length = 382

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/195 (12%), Positives = 49/195 (25%), Gaps = 20/195 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY----------GQRNKVELECRLCVRK 58
              L+  SGG DS+        +   V                 G     +  C      
Sbjct: 2   KKVLVGLSGGVDSAVAAYLLQQQGYDVTCAFMRNWDSVANEDFSGNPTLYDPVCPQEA-- 59

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
              +          E   +    + +         +             +  R  I    
Sbjct: 60  DYKDAADVAAKLGLELLRID--FIKEYWDDVFQTFIDEYKLGRTPNPDILCNR-YIKFDS 116

Query: 119 AATLAYRLGITNIVIGVCET---DYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLM 173
               A   G   +  G       + + +  C+       ++     +   V   V  PL 
Sbjct: 117 FMKFAKEKGFDIVATGHYARLGEEGNHHVLCKAVDHNKDQSYFLTEIRREVLEHVLFPLG 176

Query: 174 WLKKYETWKLAQDIG 188
            ++K E  ++A+++G
Sbjct: 177 EIEKPEVRRIAEELG 191


>gi|167648718|ref|YP_001686381.1| argininosuccinate synthase [Caulobacter sp. K31]
 gi|189046384|sp|B0T3Z9|ASSY_CAUSK RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|167351148|gb|ABZ73883.1| Argininosuccinate synthase [Caulobacter sp. K31]
          Length = 407

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 57/205 (27%), Gaps = 17/205 (8%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKI---V 61
           K     +L +SGG D+S  L W   +    V T + D GQ  ++E      +   +    
Sbjct: 4   KPVKKVVLAYSGGLDTSIILKWLQTEYGAEVVTFTADLGQGEEIEPARAKALAAGVKPEN 63

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
             +   ++    D++ P+         + T      +   ++    +  + I        
Sbjct: 64  IFIEDVREEFVRDYVFPM-------FRANTVYEGQYLLGTSIARPLIAKKQIEIARKVGA 116

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            A   G T         +   Y       + A     +      +          K++  
Sbjct: 117 DAVSHGATGKGNDQVRFELGYYALEPDIHVIAPWREWDFKSREALLDFAE-----KHQIQ 171

Query: 182 KLAQDIGGQDLVNLILEESHTCYLG 206
                 G      +     H+   G
Sbjct: 172 IAKDKRGEAPFS-VDANLLHSSSEG 195


>gi|78776227|ref|YP_392542.1| thiamine biosynthesis protein:ExsB [Sulfurimonas denitrificans
          DSM 1251]
 gi|78496767|gb|ABB43307.1| Thiamine biosynthesis protein:ExsB [Sulfurimonas denitrificans
          DSM 1251]
          Length = 326

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL-ECRLCVRKKIVELMPKWK 68
           A+ LFSGG DS+  L   +D+   V  ++ + G  +  +  E    +  ++   +    
Sbjct: 2  KAIALFSGGLDSTLALKLIIDQGIEVLAVNINTGFGSTKDRLEHMQNMCAQVGAELKIID 61


>gi|323490019|ref|ZP_08095240.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Planococcus donghaensis MPA1U2]
 gi|323396315|gb|EGA89140.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Planococcus donghaensis MPA1U2]
          Length = 371

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/184 (9%), Positives = 44/184 (23%), Gaps = 13/184 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS       ++   V  +   ++   ++  +       + ++ +  +  
Sbjct: 9   RVVVGMSGGVDSSVAAYLLKEQGYDVIGIFMKNWDDTDENGVCTATEDYEDVIRVCNQIG 68

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                     +           T  +             +     I        A  LG 
Sbjct: 69  IPYYA-----VNFEKQYWDKVFTYFLEEYKAGRTPNPDVMC-NKEIKFKAFLEHALSLGA 122

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMWLKKYETWK 182
             +  G                               L       V  P+  ++K +  +
Sbjct: 123 DYLATGHYAQVEHAENGETKMLRGKDNNKDQTYFLNQLDQHQLSKVMFPIGHMEKKKVRE 182

Query: 183 LAQD 186
           +A +
Sbjct: 183 IALE 186


>gi|194246580|ref|YP_002004219.1| tRNA-specific 2-thiouridylase MnmA [Candidatus Phytoplasma mali]
 gi|193806937|emb|CAP18369.1| tRNA (5-methylaminomethyl-2-thioruidylate) methyltransferase
           [Candidatus Phytoplasma mali]
          Length = 385

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 48/193 (24%), Gaps = 11/193 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-----YGQRNKVELECRLCVRKKIV 61
                ++  SGG DSS        +   VE +             K   + +  V  +  
Sbjct: 1   MKKKVIIGLSGGVDSSVAALLLKQKGYLVEAVFMKNWDSGLNFDIKGNPDIKELVCPQTK 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +     K S   +  L      +   + + K     ++ N  PN  V   N I       
Sbjct: 61  DYQDALKISQQLEIKLHKVDFVEEYWNKVFKYFLDSLKKNLTPNPDVLCNNEIKFNVFTK 120

Query: 122 LAYRLGITNIVIGVCETDYS------GYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
                    I  G                               L       +  PL  L
Sbjct: 121 YVDTFKPDFIATGHYANIDYDKNNKLILKKAFDTNKDQSYFLSQLKQHQLKKIIFPLGNL 180

Query: 176 KKYETWKLAQDIG 188
            K E  ++A+  G
Sbjct: 181 TKPEVREIAKKAG 193


>gi|194759139|ref|XP_001961807.1| GF15152 [Drosophila ananassae]
 gi|190615504|gb|EDV31028.1| GF15152 [Drosophila ananassae]
          Length = 680

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIV 61
           +   LLL SGG DSS C +         ++  +  D G   K E E      ++I 
Sbjct: 228 SNKVLLLVSGGVDSSVCAALLRRALYPNQIIAVHVDNGFMRKDESEKVERSLREIG 283


>gi|313123455|ref|YP_004033714.1| tRNA-specific 2-thiouridylase mnma [Lactobacillus delbrueckii
           subsp. bulgaricus ND02]
 gi|312280018|gb|ADQ60737.1| tRNA-specific 2-thiouridylase mnmA [Lactobacillus delbrueckii
           subsp. bulgaricus ND02]
          Length = 375

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 49/192 (25%), Gaps = 12/192 (6%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           ++  +    ++  SGG DSS        +   V  +          +  C     +   +
Sbjct: 1   MVDNSKIRVVVGMSGGVDSSVSALLLKQQGYDVVGVFMKNWDDTNDDGVC--TATEDYED 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +           + +            + +    + +    PN  +     I        
Sbjct: 59  VKKVADKIGIPYYSIN---FEKEYWERVFQYFLKEYKAGRTPNPDIMCNTEIKFKSFLEY 115

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTI------RAIETAINLGMESHVTVHTPLMWLK 176
           A  L    + +G             H                 L  E    V  PL  L 
Sbjct: 116 ALALDADYLAMGHYAKTMVDENGVTHMMRPKDGNKDQTYFLSQLTQEQIKRVMFPLQDLT 175

Query: 177 KYETWKLAQDIG 188
           K E  ++A++ G
Sbjct: 176 KPEVRRIAEEAG 187


>gi|226479158|emb|CAX73074.1| putative GMP synthase [Schistosoma japonicum]
          Length = 739

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 2/66 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           A   L+L SGG DS+ C +      D  ++  +  D G   K E    +   K +   + 
Sbjct: 212 ANKILILLSGGVDSTVCAALLSKTLDPSQIIAVHIDNGFLRKDESSKVIESLKSLGIKVH 271

Query: 66  KWKDSL 71
                L
Sbjct: 272 LINAGL 277


>gi|197294784|ref|YP_001799325.1| tRNA-specific 2-thiouridylase MnmA [Candidatus Phytoplasma
           australiense]
 gi|226704773|sp|B1VAX7|MNMA_PHYAS RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|171854111|emb|CAM12100.1| tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Candidatus Phytoplasma australiense]
          Length = 375

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 47/195 (24%), Gaps = 19/195 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLS---------FDYGQRNKVELECRLCVRKK 59
              ++  SGG DS+            VE +          FD+     +   C   +   
Sbjct: 2   KKVVVGLSGGVDSAVSALLLKKAGYEVEAVFMRNWDSQLNFDFQGNPTLNDVCPQEL--D 59

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
             + +        + H +    + +         +     +       +    I F  F 
Sbjct: 60  YKDALKVSLQLGIKLHRVN--FIEEYWQKVFLYFINAFKNNLTPNPDILCNNEIKFKAFI 117

Query: 120 ATLAYRLGITNIVIGVCETDYS------GYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
                +L    I +G                               L       +  PL 
Sbjct: 118 NYATSKLKPQYIAMGHYARLIYDKNQKVSLACPLDKNKDQTYFLSQLKTSQLKNILFPLA 177

Query: 174 WLKKYETWKLAQDIG 188
            L K E  K+A + G
Sbjct: 178 DLTKKEVRKIALENG 192


>gi|150399298|ref|YP_001323065.1| thiamine biosynthesis protein [Methanococcus vannielii SB]
 gi|150012001|gb|ABR54453.1| thiamine biosynthesis protein [Methanococcus vannielii SB]
          Length = 299

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/176 (11%), Positives = 46/176 (26%), Gaps = 8/176 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVE-TLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +++ SGG+DS+  L+ A      V   + F +     +  +    +  +      
Sbjct: 37  NNEKIVVMLSGGKDSAVSLAIAKSLGLNVHLCVHFLHDWSWNISTDEAKKLADRFNV--K 94

Query: 66  KWKDSLGEDHILPLAILGD-----ISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                + E+ +             I  + +   +    ++ N          +  +    
Sbjct: 95  IIFPDITEELLKKTQGAKGKSICRICKTIMKARMVEIAKEENAKIIMTGETALEKIAGPI 154

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
               R    NI     +  YS     +      I     L    H  +     +  
Sbjct: 155 FEHIRENNKNIKRKSEQELYSQMELTKVPKRYKIHFFRPLIRVGHFDIFNLQKYYN 210


>gi|262306039|gb|ACY45612.1| gln amidotransferase [Eremocosta gigasella]
          Length = 196

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 24/65 (36%), Gaps = 2/65 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               L+L SGG DS+ C +      + D+V     D G   K E +       K+   + 
Sbjct: 43  NNKVLMLISGGVDSTVCAALLHKALKDDQVIAFHIDNGFMRKDESKQVEVSLSKLGLKLK 102

Query: 66  KWKDS 70
               S
Sbjct: 103 VINAS 107


>gi|254462137|ref|ZP_05075553.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhodobacterales bacterium HTCC2083]
 gi|206678726|gb|EDZ43213.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Rhodobacteraceae bacterium HTCC2083]
          Length = 381

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 35/135 (25%), Gaps = 4/135 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS   +        V  ++   Y     +  +   C    I +     +
Sbjct: 22  RVVVAMSGGVDSSVVAAQLASEGYDVVGVTLQLYDHGAALAKKGACCAGLDIHDARRVAE 81

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +     ++L       +   ++    A        P   +     +        A  L  
Sbjct: 82  EMGFPHYVLDYEN---VFKDAVIDEFADSYLAGATPVPCIRCNERVKFKDLLETAKDLDA 138

Query: 129 TNIVIGVCETDYSGY 143
             +  G       G 
Sbjct: 139 DCMATGHYIQRKMGP 153


>gi|126730086|ref|ZP_01745898.1| argininosuccinate synthase [Sagittula stellata E-37]
 gi|126709466|gb|EBA08520.1| argininosuccinate synthase [Sagittula stellata E-37]
          Length = 412

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 42/158 (26%), Gaps = 5/158 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W   +    V T + D GQ  ++E        + +   
Sbjct: 6   MNAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEP--ARKKAELLGIK 63

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                     +  +           +      + +   ++    +  R +         A
Sbjct: 64  PENIYIEDVREEFV--RDFVFPMFRANAVYEGLYLLGTSIARPLISKRLVEIAEETGADA 121

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
              G T         + S           A     NL 
Sbjct: 122 IAHGATGKGNDQVRFELSAAALNPDIKCIAPWREWNLN 159


>gi|268580781|ref|XP_002645373.1| Hypothetical protein CBG15441 [Caenorhabditis briggsae]
 gi|187027151|emb|CAP33778.1| CBR-ASNS-2 protein [Caenorhabditis briggsae AF16]
          Length = 567

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 42/170 (24%), Gaps = 6/170 (3%)

Query: 13  LLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           +L SGG DSS   S A      R   V   SF  G  +            K +       
Sbjct: 234 VLLSGGLDSSLVSSIASREMKRRGMTVH--SFSIGVDHNSPDVVAARKVAKFIGTTHHEF 291

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               ++ I  L  L     S    ++        L          + L          G 
Sbjct: 292 YFSIQEGIKNLRKLIWHLESYDVTSIRASTPMYFLSEEIRKKGIKVVLSGEGADEIFGGY 351

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
                   + ++      R   +   +           +V   + +L K 
Sbjct: 352 LYFHNAPSDEEFQKETIDRVLHLYTSDCLRADKSSMAHSVEVRVPFLDKA 401


>gi|298246334|ref|ZP_06970140.1| GMP synthase, large subunit [Ktedonobacter racemifer DSM 44963]
 gi|297553815|gb|EFH87680.1| GMP synthase, large subunit [Ktedonobacter racemifer DSM 44963]
          Length = 548

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 47/185 (25%), Gaps = 12/185 (6%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DS+           D++  +  D G   + E E    V +     +  
Sbjct: 245 KERILCALSGGVDSAVAALLVHKAIGDQLTCMFVDTGCMREGEGE---QVAETFRNHLHI 301

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              ++  +      + G        K +  +                  + F        
Sbjct: 302 PLVAIDAEERFLGKLAGVTDPERKRKIIGEEFIRVFEEEAVKLATEQGKISFL------- 354

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                +        S         I+       L  E    +  PL  L K E  ++  +
Sbjct: 355 -AQGTLYPDVIESTSHDTANTAKRIKTHHNVGGLPEEMVFKLVEPLRMLFKDEVREIGLE 413

Query: 187 IGGQD 191
           +G  +
Sbjct: 414 LGLPE 418


>gi|284928867|ref|YP_003421389.1| GMP synthase [cyanobacterium UCYN-A]
 gi|284809326|gb|ADB95031.1| GMP synthase (glutamine-hydrolyzing) [cyanobacterium UCYN-A]
          Length = 544

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 53/188 (28%), Gaps = 11/188 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K    LL  SGG DSST          D +  +  D G   K E E  + +  K      
Sbjct: 239 KDRKVLLALSGGVDSSTLAFLLHQAIGDNLTCMFIDQGFMRKGEPERLVSIFSK---QFH 295

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              + +         + G         +   K          V       L     LA  
Sbjct: 296 IPVEYVDARERFIKKLEG-------IVDPEEKRHLIGHEFIQVFEEESQRLGPFDYLAQG 348

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
               +++        S   +     I++      L       +  PL  L K E  ++ Q
Sbjct: 349 TLYPDVIESADTNINSSTGERVAVKIKSHHNVGGLPKNLRFKLVEPLRKLFKDEVRRVGQ 408

Query: 186 DIGGQDLV 193
            IG  + +
Sbjct: 409 SIGLPEEI 416


>gi|86142174|ref|ZP_01060684.1| argininosuccinate synthase [Leeuwenhoekiella blandensis MED217]
 gi|85830926|gb|EAQ49383.1| argininosuccinate synthase [Leeuwenhoekiella blandensis MED217]
          Length = 395

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 60/207 (28%), Gaps = 22/207 (10%)

Query: 9   PSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L +SGG D S      + ++   V  +S + G   + E++       KI     K 
Sbjct: 2   KKLVLAYSGGLDTSYCAKYLSEEKGFEVHAVSINTGGFTQEEIDEIESKALKIGAKTYKN 61

Query: 68  KDSLGE--DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             ++    D ++   I G++               NN     V    II  V     A  
Sbjct: 62  VQAVDRFYDKVVKYLIFGNVL-------------KNNTYPLSVSAERIIQAVEIINYAKS 108

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G   +  G                  A E  I   +          +   K    +++ 
Sbjct: 109 IGAEYVAHGSTGAGNDQVRFDMIFQTLAPEIEIITPIRDLKLSRQEEIDYLKSHGVEMSW 168

Query: 186 DIGGQDLVNLIL------EESHTCYLG 206
           +     +   +        E+ T + G
Sbjct: 169 EKAQYSINRGLWGTSVGGSETLTSHQG 195


>gi|262306061|gb|ACY45623.1| gln amidotransferase [Lepas anserifera]
          Length = 197

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 23/65 (35%), Gaps = 2/65 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               LLL SGG DS+ C +        ++V  +  D G   K E        K+I   + 
Sbjct: 43  TQKVLLLVSGGVDSTVCAALLHKALSPEQVVAVHIDNGFMRKNESLQVEQSLKRIGLKLR 102

Query: 66  KWKDS 70
                
Sbjct: 103 VINAR 107


>gi|257458053|ref|ZP_05623212.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Treponema vincentii ATCC 35580]
 gi|257444766|gb|EEV19850.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Treponema vincentii ATCC 35580]
          Length = 358

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 46/185 (24%), Gaps = 11/185 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +  SGG DS+      +++   V  ++         +        ++I+    +   
Sbjct: 2   KIAVGLSGGVDSTVVAKLLMEQGHEVCGVTLR---VLNEKNPVAKEQSERIIGEAAQAAR 58

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG  H +          + +         +   PN        I        A + G  
Sbjct: 59  ILGIPHRV--YDFRAEFQTHIIDYFIQSYCNGETPNPCYICNKQIKFGLLLERALQEGCD 116

Query: 130 NIVIGVCETDYSGYPDCR------HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            +  G     +                         L  E       PL  L K E   +
Sbjct: 117 AVATGHYAKVFQESSGRYVLERGVDAQKDQSYFLALLSQEQLSRTLFPLAELTKPEVRLI 176

Query: 184 AQDIG 188
           A+  G
Sbjct: 177 AEKAG 181


>gi|157813142|gb|ABV81316.1| putative GMP synthetase [Nebalia hessleri]
          Length = 200

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 22/65 (33%), Gaps = 2/65 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               L+L SGG DS+ C +          V  +  D G   K E        +K+   + 
Sbjct: 43  TNKVLMLVSGGVDSTVCAALLHKALPEEQVLAVHIDNGFMRKNESLQVEQSLRKLGLKLR 102

Query: 66  KWKDS 70
             K  
Sbjct: 103 VIKAR 107


>gi|241668630|ref|ZP_04756208.1| hypothetical protein FphipA2_07676 [Francisella philomiragia
          subsp. philomiragia ATCC 25015]
 gi|254877163|ref|ZP_05249873.1| conserved hypothetical protein [Francisella philomiragia subsp.
          philomiragia ATCC 25015]
 gi|254843184|gb|EET21598.1| conserved hypothetical protein [Francisella philomiragia subsp.
          philomiragia ATCC 25015]
          Length = 348

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 33/80 (41%), Gaps = 3/80 (3%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ---RNKVELECRLCVRKKI 60
          + KK   A+ L SGG DS       L++   VE ++F  G     +   +  +   ++K 
Sbjct: 1  MEKKQVKAVSLISGGLDSMLATKMMLEQGIHVEGINFFTGFCVEGHTHAIRKQDKEKQKR 60

Query: 61 VELMPKWKDSLGEDHILPLA 80
             +   +    + HI+ + 
Sbjct: 61 NNSLWVAEQLGIKLHIIDVI 80


>gi|224369845|ref|YP_002604009.1| argininosuccinate synthase [Desulfobacterium autotrophicum HRM2]
 gi|223692562|gb|ACN15845.1| ArgG [Desulfobacterium autotrophicum HRM2]
          Length = 403

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 52/158 (32%), Gaps = 9/158 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVR-KKIVE 62
           +      +L +SGG D+S  L W ++ +   V TL+ D GQ  +++      ++   +  
Sbjct: 1   MSDIKKVVLAYSGGLDTSVILKWLIETYHCEVVTLTADLGQEEELDGLEAKALKTGAVKA 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
            +   ++    D++ P       +  +        +   ++    +  R I         
Sbjct: 61  YVEDLREEFIRDYVFP-------AFRANAIYEGQYLLGTSIARPLIAKRQIEIAAAEGAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         +   +       I A     +L
Sbjct: 114 AVSHGATGKGNDQVRFELGYFAMNPAIKIIAPWRDWDL 151


>gi|195867812|ref|ZP_03079812.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ureaplasma urealyticum serovar 9 str. ATCC 33175]
 gi|195660509|gb|EDX53766.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ureaplasma urealyticum serovar 9 str. ATCC 33175]
          Length = 350

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 53/202 (26%), Gaps = 25/202 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF------------------DYGQRN 46
           +      ++  SGG DSS        +   V  L                      G  +
Sbjct: 3   VNTKKRVVIGLSGGVDSSVSALLLKQQGYEVIGLFMANWDTVANFENNRESDKKHQGCES 62

Query: 47  KVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT 106
           +++ +    V +KI            E        + +   S   KN       + L N 
Sbjct: 63  ELDYQDAQAVAQKIG-----IPLYRVEFIKEYWNNVFEYFLSEYQKNRTPNP--DILCNQ 115

Query: 107 FVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV 166
           F+   + +        A  + + +        + S                 NL      
Sbjct: 116 FIKFDSFLNYAKNELKADYIAMGHYAKVKHTNNLSYLLKATDVNKDQTYFLCNLKQTQLQ 175

Query: 167 TVHTPLMWLKKYETWKLAQDIG 188
               P+  L K +   +A++ G
Sbjct: 176 NALFPIGDLTKQQVRTIAKEYG 197


>gi|254383092|ref|ZP_04998446.1| GMP synthase [Streptomyces sp. Mg1]
 gi|194341991|gb|EDX22957.1| GMP synthase [Streptomyces sp. Mg1]
          Length = 545

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 57/186 (30%), Gaps = 14/186 (7%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             A+   SGG DS+   +        ++  +  D+G   K E E          ++   +
Sbjct: 227 KRAICGLSGGVDSAVAAALVQKAIGSQLTCVYVDHGLMRKGETE----------QVEKDF 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             + G    +  A    ++  +   +   K +        V  +  + ++     A    
Sbjct: 277 VAATGVQLKVVDAQERFLNALAGVSDPETKRKIIGREFIRVFEQAQLEILQEDGPAV--- 333

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   +               I++      L  +    +  PL  L K E   + Q++
Sbjct: 334 AFLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPDDIEFELVEPLRQLFKDEVRMVGQEL 393

Query: 188 GGQDLV 193
           G  D +
Sbjct: 394 GLPDEI 399


>gi|171920850|ref|ZP_02932016.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ureaplasma urealyticum serovar 13 str. ATCC 33698]
 gi|185178984|ref|ZP_02964738.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ureaplasma urealyticum serovar 5 str. ATCC 27817]
 gi|188024081|ref|ZP_02996823.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ureaplasma urealyticum serovar 7 str. ATCC 27819]
 gi|188518246|ref|ZP_03003776.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ureaplasma urealyticum serovar 11 str. ATCC 33695]
 gi|188524394|ref|ZP_03004420.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ureaplasma urealyticum serovar 12 str. ATCC 33696]
 gi|198273769|ref|ZP_03206303.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ureaplasma urealyticum serovar 4 str. ATCC 27816]
 gi|209554475|ref|YP_002284838.1| tRNA-specific 2-thiouridylase MnmA [Ureaplasma urealyticum serovar
           10 str. ATCC 33699]
 gi|225550854|ref|ZP_03771803.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ureaplasma urealyticum serovar 2 str. ATCC 27814]
 gi|225551575|ref|ZP_03772521.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ureaplasma urealyticum serovar 8 str. ATCC 27618]
 gi|229487425|sp|B5ZBP8|MNMA_UREU1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|171903054|gb|EDT49343.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ureaplasma urealyticum serovar 13 str. ATCC 33698]
 gi|184209268|gb|EDU06311.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ureaplasma urealyticum serovar 5 str. ATCC 27817]
 gi|188019125|gb|EDU57165.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ureaplasma urealyticum serovar 7 str. ATCC 27819]
 gi|188998055|gb|EDU67152.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ureaplasma urealyticum serovar 11 str. ATCC 33695]
 gi|195660126|gb|EDX53506.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ureaplasma urealyticum serovar 12 str. ATCC 33696]
 gi|198249524|gb|EDY74306.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ureaplasma urealyticum serovar 4 str. ATCC 27816]
 gi|209541976|gb|ACI60205.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ureaplasma urealyticum serovar 10 str. ATCC 33699]
 gi|225379390|gb|EEH01755.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ureaplasma urealyticum serovar 8 str. ATCC 27618]
 gi|225380008|gb|EEH02370.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ureaplasma urealyticum serovar 2 str. ATCC 27814]
          Length = 380

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 53/202 (26%), Gaps = 25/202 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF------------------DYGQRN 46
           +      ++  SGG DSS        +   V  L                      G  +
Sbjct: 3   VNTKKRVVIGLSGGVDSSVSALLLKQQGYEVIGLFMANWDTVANFENNRESDKKHQGCES 62

Query: 47  KVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT 106
           +++ +    V +KI            E        + +   S   KN       + L N 
Sbjct: 63  ELDYQDAQAVAQKIG-----IPLYRVEFIKEYWNNVFEYFLSEYQKNRTPNP--DILCNQ 115

Query: 107 FVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV 166
           F+   + +        A  + + +        + S                 NL      
Sbjct: 116 FIKFDSFLNYAKNELKADYIAMGHYAKVKHTNNLSYLLKATDVNKDQTYFLCNLKQTQLQ 175

Query: 167 TVHTPLMWLKKYETWKLAQDIG 188
               P+  L K +   +A++ G
Sbjct: 176 NALFPIGDLTKQQVRTIAKEYG 197


>gi|119186717|ref|XP_001243965.1| hypothetical protein CIMG_03406 [Coccidioides immitis RS]
          Length = 421

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 3/77 (3%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          +      LL +SGG D+S  L+W +++   V     D GQ    + +        +    
Sbjct: 1  MANKEKVLLAYSGGLDTSCILAWLIEQGHEVVCFLADVGQ--AEDFKEAERKALAVGA-K 57

Query: 65 PKWKDSLGEDHILPLAI 81
              + L  + +  L  
Sbjct: 58 KLVVEDLKREFVEDLCF 74


>gi|47210539|emb|CAF90658.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 720

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 22/58 (37%), Gaps = 2/58 (3%)

Query: 13  LLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           +L SGG DS+ C +        ++V  +  D G   K E +       K+   +    
Sbjct: 243 VLLSGGVDSTVCTALLNKALNQEQVIAVHIDNGFMRKRESQSVEEALTKLGIKLKVVN 300


>gi|307711099|ref|ZP_07647521.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus mitis SK321]
 gi|307617061|gb|EFN96239.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus mitis SK321]
          Length = 373

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 51/194 (26%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D  K     ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + ++   PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYREGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMW 174
             A  LG   +  G             H                 L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYARVARDEDGTVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  KLA++ G
Sbjct: 174 LEKPEVRKLAEEAG 187


>gi|300121184|emb|CBK21565.2| unnamed protein product [Blastocystis hominis]
          Length = 475

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/201 (12%), Positives = 53/201 (26%), Gaps = 14/201 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           + + K+  +  +  SGG DSS      L +   V+ +        +   +    ++   +
Sbjct: 128 STVSKRWKTVFVGLSGGIDSSVSAYLLLKQGYDVKGVFMKNWSAEEETGKPLCPLKDDFI 187

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +     +                   +++ +           PN  V     I     A 
Sbjct: 188 DARNVAEFLGIPLITYD---FEKEYWTNVFEVCLDAFSSGLTPNPDVLCNRYIKFDAFAH 244

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDT-----------IRAIETAINLGMESHVTVHT 170
             +  G   I  G       G P                          +       V  
Sbjct: 245 RCFHEGADYIATGHYCRTNQGKPLSPFSEGIELLRGIDKSKDQSYFLSQINHSLLSRVLF 304

Query: 171 PLMWLKKYETWKLAQDIGGQD 191
           P+  + K    +LA+++G  +
Sbjct: 305 PVGGMTKTAVRRLAEEVGLPN 325


>gi|307730812|ref|YP_003908036.1| argininosuccinate synthase [Burkholderia sp. CCGE1003]
 gi|307585347|gb|ADN58745.1| argininosuccinate synthase [Burkholderia sp. CCGE1003]
          Length = 408

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 51/157 (32%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +D  V T + D GQ  ++E   R    +  ++ 
Sbjct: 1   MSDIKKVVLAYSGGLDTSVILKWLQDNYDAEVVTFTADIGQGEELEP-ARKKALQLGIKP 59

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + + L E+ +            + T      +   ++    +  R I         A
Sbjct: 60  ENIFIEDLREEFVRDFVF---PMFRANTIYEGEYLLGTSIARPLIAKRQIEIARATGAQA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         +   Y       + A     +L
Sbjct: 117 VSHGATGKGNDQVRFELGYYALEPGIKVIAPWREWDL 153


>gi|262306071|gb|ACY45628.1| gln amidotransferase [Loxothylacus texanus]
          Length = 197

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 36/117 (30%), Gaps = 2/117 (1%)

Query: 10  SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             LLL SGG DS+ C +        DRV TL  D G   K E +       KI   +   
Sbjct: 45  KVLLLVSGGVDSTVCAALLHKALGSDRVITLHIDNGFMRKDESKQVQESLSKIGLNLKVV 104

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                  H          + +  T+  +M     +  +      +    V    +  
Sbjct: 105 DAXHRFSHGTTTIPEPGTNKTMRTRPTSMLCHTAHPEHKRKIIGDTFINVANEVMCE 161


>gi|303317558|ref|XP_003068781.1| argininosuccinate synthase, putative [Coccidioides posadasii C735
          delta SOWgp]
 gi|240108462|gb|EER26636.1| argininosuccinate synthase, putative [Coccidioides posadasii C735
          delta SOWgp]
 gi|320038769|gb|EFW20704.1| argininosuccinate synthase [Coccidioides posadasii str. Silveira]
          Length = 421

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 28/77 (36%), Gaps = 3/77 (3%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          +      LL +SGG D+S  L+W +++   V     D GQ    + +        I    
Sbjct: 1  MANKEKVLLAYSGGLDTSCILAWLIEQGHEVVCFLADVGQ--AEDFKEAERKALAIGA-K 57

Query: 65 PKWKDSLGEDHILPLAI 81
              + L  + +  L  
Sbjct: 58 KLVVEDLKREFVEDLCF 74


>gi|237747034|ref|ZP_04577514.1| argininosuccinate synthase [Oxalobacter formigenes HOxBLS]
 gi|229378385|gb|EEO28476.1| argininosuccinate synthase [Oxalobacter formigenes HOxBLS]
          Length = 408

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 51/157 (32%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  ++E   R    K  ++ 
Sbjct: 1   MSDVKKVVLAYSGGLDTSVILKWLQDTYQCEVVTFTADLGQGEELEP-ARQKALKFGIKP 59

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + D L E+ +            + T      +   ++    +  R I         A
Sbjct: 60  ENIFIDDLREEFVRDFVF---PMFRANTIYEGEYLLGTSIARPLIAKRLIEIARQTGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         +   Y    +  I A     +L
Sbjct: 117 IAHGATGKGNDQVRFELGAYALMPNIKIIAPWREWDL 153


>gi|195388470|ref|XP_002052903.1| GJ19601 [Drosophila virilis]
 gi|194149360|gb|EDW65058.1| GJ19601 [Drosophila virilis]
          Length = 684

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 55/194 (28%), Gaps = 8/194 (4%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIV-ELM 64
               LLL SGG DSS C +         ++  +  D G   K E E      + I  +L+
Sbjct: 228 NNKVLLLVSGGVDSSVCAALLRRALHPSQIIAVHVDNGFMRKNESEKVERSLRDIGIDLI 287

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP---NTFVPGRNIIFLVFAAT 121
            + +          +   G  S             +       + FV   N +       
Sbjct: 288 VRKEGYTFLKGTTQVKRPGQYSVVETPMLCQTYNPEEKRKIIGDIFVKVTNDVVAELKLK 347

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYE 179
               L     +        S       +TI+      +L  E      V  PL    K E
Sbjct: 348 PEEVLLAQGTLRPDLIESASNMVSTNAETIKTHHNDTDLIRELRNAGRVVEPLCDFHKDE 407

Query: 180 TWKLAQDIGGQDLV 193
              L  D+G    +
Sbjct: 408 VRDLGNDLGLPAEL 421


>gi|91785024|ref|YP_560230.1| argininosuccinate synthase [Burkholderia xenovorans LB400]
 gi|119361260|sp|Q13UR1|ASSY_BURXL RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|91688978|gb|ABE32178.1| argininosuccinate synthase [Burkholderia xenovorans LB400]
          Length = 408

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 51/157 (32%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +D  V T + D GQ  ++E   R    +  ++ 
Sbjct: 1   MSDIKKVVLAYSGGLDTSVILKWLQDNYDAEVVTFTADIGQGEELEP-ARKKALQLGIKP 59

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + + L E+ +            + T      +   ++    +  R I         A
Sbjct: 60  ENIFIEDLREEFVRDFVF---PMFRANTIYEGEYLLGTSIARPLIAKRQIEIARATGAQA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         +   Y       + A     +L
Sbjct: 117 VSHGATGKGNDQVRFELGYYALEPGIKVIAPWREWDL 153


>gi|118579504|ref|YP_900754.1| thiamine biosynthesis protein [Pelobacter propionicus DSM 2379]
 gi|118502214|gb|ABK98696.1| thiamine biosynthesis protein [Pelobacter propionicus DSM 2379]
          Length = 335

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 20/60 (33%), Gaps = 5/60 (8%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS-----FDYGQRNKVELECRLCVRKKIV 61
              AL LFSGG DS   +    ++   VE +S     F               V + + 
Sbjct: 1  MKRKALALFSGGLDSILAVRLMQEQGIEVEAVSFVLPFFSCSSDGTERDLAAARVARHLG 60


>gi|305664217|ref|YP_003860505.1| PP-loop domain protein [Ignisphaera aggregans DSM 17230]
 gi|304378786|gb|ADM28625.1| PP-loop domain protein [Ignisphaera aggregans DSM 17230]
          Length = 298

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/201 (12%), Positives = 55/201 (27%), Gaps = 44/201 (21%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           + I++    +++FSGG DS+     A D   +    ++ D     + E+   + + K I 
Sbjct: 27  EAIREKEKIVVMFSGGVDSTLLAKLAYDVLGNNAIAVTIDSPVIPRSEIRDAIQIAKLIG 86

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                         ++ +  L +        +                            
Sbjct: 87  ----------IRHEVIEIDELRNKYLVENPPD-------------RCYLCRKFRDAIVKN 123

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            A R+G   +        Y+   D R     + E  I                + K E  
Sbjct: 124 WAKRIGFDVV---ADGLHYTDLEDYRPGIAASTEDGIWHPFIEF--------QVTKDEIR 172

Query: 182 KLAQDIGGQDLVNLILEESHT 202
           + ++ +G           + +
Sbjct: 173 EYSRLLGLP---------TWS 184


>gi|303241844|ref|ZP_07328339.1| GMP synthase, large subunit [Acetivibrio cellulolyticus CD2]
 gi|302590619|gb|EFL60372.1| GMP synthase, large subunit [Acetivibrio cellulolyticus CD2]
          Length = 511

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 56/188 (29%), Gaps = 23/188 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS            ++  +  D+G   K E +    V +       ++
Sbjct: 216 KKVLCALSGGVDSSVAAVLINKAIGKQLTCIFVDHGLLRKYEGDQVEEVFR------NQY 269

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +L   ++    +      +       +  ++              F+      A ++G
Sbjct: 270 DINLIRANVEDRFMDRLAGVTDPETKRKIIGEE--------------FIRVFEVEAKKIG 315

Query: 128 I-TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLAQ 185
               +V G    D           I++      L        +  PL  L K E  ++  
Sbjct: 316 AVDFLVQGTIYPDVIESGLGNAAVIKSHHNVGGLPDYVDFKEIIEPLRNLFKDEVRRVGT 375

Query: 186 DIGGQDLV 193
           ++G  D +
Sbjct: 376 ELGIPDEI 383


>gi|85711187|ref|ZP_01042247.1| thiamine biosynthesis protein ThiI [Idiomarina baltica OS145]
 gi|85695100|gb|EAQ33038.1| thiamine biosynthesis protein ThiI [Idiomarina baltica OS145]
          Length = 485

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 52/195 (26%), Gaps = 25/195 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           I    + + L SGG DSS      + R  R     F+ G            V   + ++ 
Sbjct: 176 IPTQETVVSLMSGGFDSSVASFDFIRRGARTHFCFFNLGGD-------AHEVA--VKQIC 226

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
               D   + H +          S     +   I  +              L  A  +A 
Sbjct: 227 HYLWDRYSKSHPIKFI-------SVDFAPIVEDILTHVDNGAMGVVLKRQMLRAATRVAG 279

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            L    +V G      S         I      +         V  PL+   K      A
Sbjct: 280 FLKAQALVTGEAIGQVSSQTLANLQVIDKATDTL---------VLRPLITADKQTIVDQA 330

Query: 185 QDIGGQDLVNLILEE 199
           + IG + L   I E 
Sbjct: 331 KRIGTEALAKTIPEY 345


>gi|261749175|ref|YP_003256860.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Blattabacterium sp. (Periplaneta americana) str. BPLAN]
 gi|261497267|gb|ACX83717.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Blattabacterium sp. (Periplaneta americana) str. BPLAN]
          Length = 394

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 48/197 (24%), Gaps = 11/197 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC-------RLCVRKK 59
           +    ++  SGG DSS        +   V  L       +              L V K 
Sbjct: 2   QKKRVVVGLSGGVDSSVAALLLKKQGYEVIGLFMHNWDDSVFNQCTWKEDSIDALLVAKD 61

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +       +     +  + +  + D   S  T N  +        N F+     +   F 
Sbjct: 62  LNIPFQVVEMKKEYEESI-INYMFDGYRSGKTPNPDILCNREIKFNVFLKKSIDLGADFI 120

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           AT  Y      I                            L          PL  L K +
Sbjct: 121 ATGHYVNKKKIIKNNKIIYRLLVGK---DSNKDQSYFLCQLTQYQLKKSLFPLGSLTKNQ 177

Query: 180 TWKLAQDIGGQDLVNLI 196
             K+A+  G  +     
Sbjct: 178 VRKIAEKNGLCNAYKKD 194


>gi|28870522|ref|NP_793141.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|37999578|sp|Q87ZR6|MNMA_PSESM RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|28853770|gb|AAO56836.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 376

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 38/146 (26%), Gaps = 8/146 (5%)

Query: 1   MND---IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           M D      +    ++  SGG DSS      +++  +VE L     + +     C    R
Sbjct: 1   MRDPAPSNSEMKRVIVGMSGGVDSSVSAVLLMEQGYQVEGLFMKNWEEDDGTEYC--TAR 58

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           + + +          + H        +   +     +             +  R  I   
Sbjct: 59  EDLADAQAVCDRIGIKLHT--ANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFK 115

Query: 118 FAATLAYRLGITNIVIGVCETDYSGY 143
                A  LG   I  G         
Sbjct: 116 AFLDYALMLGADLIATGHYVRRRDID 141


>gi|23099469|ref|NP_692935.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methy ltransferase
           [Oceanobacillus iheyensis HTE831]
 gi|30173412|sp|Q8CXC7|MNMA_OCEIH RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|22777698|dbj|BAC13970.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Oceanobacillus iheyensis HTE831]
          Length = 371

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 47/192 (24%), Gaps = 15/192 (7%)

Query: 5   IKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIV 61
           +K       ++  SGG DSS        +   V  +   ++   ++  +         +V
Sbjct: 1   MKNNKDTRVVVGMSGGVDSSVAALLLKQQGYDVVGIFMKNWDDTDEFGVCTATEDFDDVV 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
            +  +      E     +           T  +             +     I       
Sbjct: 61  RVCNQL-----EIPYYSVNFEKQYWDKVFTYFLDEYKAGRTPNPDVMC-NKEIKFKAFLD 114

Query: 122 LAYRLGITNIVIGVCETDYSGYP------DCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
            A  LG   +  G                    +          L  +    V  PL  L
Sbjct: 115 HALALGADYLATGHYAQVRRDKNGRVEMLRGNDENKDQTYFLNQLSEDVLDKVMFPLGHL 174

Query: 176 KKYETWKLAQDI 187
            K E  K+A++ 
Sbjct: 175 PKSEVRKIAKEH 186


>gi|296273180|ref|YP_003655811.1| argininosuccinate synthase [Arcobacter nitrofigilis DSM 7299]
 gi|296097354|gb|ADG93304.1| argininosuccinate synthase [Arcobacter nitrofigilis DSM 7299]
          Length = 414

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 51/182 (28%), Gaps = 6/182 (3%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKK 59
           M+   K+    +L +SGG D+ST L W  D +   V T + D GQ  +VE      +   
Sbjct: 1   MSK--KEVKKVVLAYSGGLDTSTILKWLQDEYNAEVITFTADLGQGEEVEPARTKALACG 58

Query: 60  I---VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
           I      +   K+   +D++ P+     I         ++           +  +     
Sbjct: 59  IKPENIFILDIKEEFVKDYVFPMFRANAIYEGEYLLGTSIARPLIAKKQIEIAHKMGADA 118

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
           V               +G    D                    L       +      L 
Sbjct: 119 VSHGATGKGNDQVRFELGYLGLDSEITVIAPWREWDLNSREKLLAYAKKNGIEIDKKHLD 178

Query: 177 KY 178
           K 
Sbjct: 179 KD 180


>gi|253568894|ref|ZP_04846304.1| tRNA-specific 2-thiouridylase mnmA 2 [Bacteroides sp. 1_1_6]
 gi|251840913|gb|EES68994.1| tRNA-specific 2-thiouridylase mnmA 2 [Bacteroides sp. 1_1_6]
          Length = 369

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 52/189 (27%), Gaps = 10/189 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIVE 62
           +++    LL  SGG DSS      L+    V  ++F + + N      E    + +++  
Sbjct: 1   MEENKRVLLGMSGGTDSSVAAMRLLEAGYEVTGVTFRFYELNDSTEYLEDARHLAERLGI 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
               +         +    + +      T        +           + + + + AT 
Sbjct: 61  RHITYDAREIFRKQIIEYFVHEYMVG-HTPVPCTLCNNYLKWPLLSKIADEMGIFYIATG 119

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
            Y   +                D         +  +         +  P+  + K E   
Sbjct: 120 HYVRKVKVDDTCYITYAADSDKDQTFFLWGLKQDILR-------RMLLPMGDITKVEARA 172

Query: 183 LAQDIGGQD 191
            A + G Q 
Sbjct: 173 FAAERGFQK 181


>gi|317487335|ref|ZP_07946129.1| GMP synthase domain-containing protein [Bilophila wadsworthia
           3_1_6]
 gi|316921434|gb|EFV42726.1| GMP synthase domain-containing protein [Bilophila wadsworthia
           3_1_6]
          Length = 513

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 47/185 (25%), Gaps = 18/185 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+             +  +  D G     E +              +   
Sbjct: 219 VVCALSGGVDSTVVAVLLHKAIGKNLHCIFVDNGVLRSGEGD--------------EVVT 264

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            L E   L L ++                +                   A      L   
Sbjct: 265 YLREHFDLNLKLVNAQDRFLDLLAGVEDPEKKRKIIGHTFIDVFDEEARAIGNVEWLAQG 324

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   V E   S         I++      L  + ++ +  PL  L K E  ++  ++G 
Sbjct: 325 TLYPDVIE---SVSHKGPSAVIKSHHNVGGLPEKMNMKLIEPLRELFKDEVRQVGAELGM 381

Query: 190 QDLVN 194
            + V 
Sbjct: 382 PESVI 386


>gi|294782620|ref|ZP_06747946.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
          [Fusobacterium sp. 1_1_41FAA]
 gi|294481261|gb|EFG29036.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
          [Fusobacterium sp. 1_1_41FAA]
          Length = 334

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 7/82 (8%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVE---TLSFDYGQRNKVELECRLCVRKKIV 61
          +K+   AL LFSGG DS+  +    D+   V     +S  +G +     E    + +++ 
Sbjct: 1  MKEKIKALALFSGGLDSALAIKVVQDQGVEVIGLNFVSHFFGGK----NEKAEKMAEQLG 56

Query: 62 ELMPKWKDSLGEDHILPLAILG 83
            +           ++   + G
Sbjct: 57 IKLEYIDFKKRHMFVVEDPVYG 78


>gi|269123624|ref|YP_003306201.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Streptobacillus moniliformis DSM 12112]
 gi|268314950|gb|ACZ01324.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Streptobacillus moniliformis DSM 12112]
          Length = 359

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 47/187 (25%), Gaps = 11/187 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                +L  SGG DSS       +    V  +          E +    V    ++    
Sbjct: 1   MKKRVVLGMSGGVDSSVAAILLKEAGYEVIGVFMKNW-----EEKDENGVCMSDIDYEDV 55

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +   +               + +    + +    PN  V     I        A +L
Sbjct: 56  ISVAEQLEIPYYSVNFVKEYWDRVFEYFLSEYRLARTPNPDVMCNKEIKFKAFLDYANKL 115

Query: 127 GITNIVIGVCETDYSGYPDCR------HDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           G   I  G      +     +       +          L  +    V  P+   +K E 
Sbjct: 116 GADYIATGHYARLTTNEKGEKVLLRGVDNNKDQSYFLCGLNQKQLEKVLFPIGEYEKTEI 175

Query: 181 WKLAQDI 187
            K+A+  
Sbjct: 176 RKIAEKY 182


>gi|255654281|ref|ZP_05399690.1| GMP synthase [Clostridium difficile QCD-23m63]
 gi|296452570|ref|ZP_06894265.1| GMP synthase (glutamine-hydrolyzing) [Clostridium difficile NAP08]
 gi|296881018|ref|ZP_06904963.1| GMP synthase (glutamine-hydrolyzing) [Clostridium difficile NAP07]
 gi|296258593|gb|EFH05493.1| GMP synthase (glutamine-hydrolyzing) [Clostridium difficile NAP08]
 gi|296427977|gb|EFH13879.1| GMP synthase (glutamine-hydrolyzing) [Clostridium difficile NAP07]
          Length = 511

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 46/188 (24%), Gaps = 19/188 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             AL   SGG DSS           D +  +  D+G   K E      + +         
Sbjct: 216 KKALCALSGGVDSSVAAVLIHKAIGDNLTCIFVDHGLLRKNEGNDVERIFR--------- 266

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                E   + L  +              + +           R              L 
Sbjct: 267 -----EKFDINLIRVNAEDRFLSKLKGVSEPEAKRKIIGEEFIRVFEEESNKLGKMDFLV 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I   V E+ +      +                    +  PL  L K E  K+  ++
Sbjct: 322 QGTIYPDVIESGHGNAATIKSHH----NVGGIPEDVDFQEIVEPLRELFKDEVRKIGLEL 377

Query: 188 GGQDLVNL 195
           G ++ +  
Sbjct: 378 GIEEGLIF 385


>gi|169839707|ref|ZP_02872895.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
          [candidate division TM7 single-cell isolate TM7a]
          Length = 42

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR 45
          ++K    +L  SGG DSS       ++   V  +    G++
Sbjct: 1  MEKRKRVVLGMSGGVDSSVAAILLKEQGYDVIGVFMKIGKK 41


>gi|171464062|ref|YP_001798175.1| Argininosuccinate synthase [Polynucleobacter necessarius subsp.
          necessarius STIR1]
 gi|229889892|sp|B1XRS6|ASSY_POLNS RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|171193600|gb|ACB44561.1| Argininosuccinate synthase [Polynucleobacter necessarius subsp.
          necessarius STIR1]
          Length = 410

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCV 56
          +     A+L +SGG D+S  L W  D     + T + D+GQ  ++E      +
Sbjct: 1  MSDIKKAVLAYSGGLDTSVILKWLQDTYGCEIVTFTADFGQGEELEPARAKAL 53


>gi|126697769|ref|YP_001086666.1| GMP synthase [Clostridium difficile 630]
 gi|255099361|ref|ZP_05328338.1| GMP synthase [Clostridium difficile QCD-63q42]
 gi|255305194|ref|ZP_05349366.1| GMP synthase [Clostridium difficile ATCC 43255]
 gi|123067183|sp|Q18CT8|GUAA_CLOD6 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|115249206|emb|CAJ67019.1| Glutamine amidotransferase [Clostridium difficile]
          Length = 511

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 46/188 (24%), Gaps = 19/188 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             AL   SGG DSS           D +  +  D+G   K E      + +         
Sbjct: 216 KKALCALSGGVDSSVAAVLIHKAIGDNLTCIFVDHGLLRKNEGNDVERIFR--------- 266

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                E   + L  +              + +           R              L 
Sbjct: 267 -----EKFDINLIRVNAEDRFLSKLKGVSEPEAKRKIIGEEFIRVFEEESNKLGKMDFLV 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I   V E+ +      +                    +  PL  L K E  K+  ++
Sbjct: 322 QGTIYPDVIESGHGNAATIKSHH----NVGGIPEDVDFQEIVEPLRELFKDEVRKIGLEL 377

Query: 188 GGQDLVNL 195
           G ++ +  
Sbjct: 378 GIEEGLIF 385


>gi|254973858|ref|ZP_05270330.1| GMP synthase [Clostridium difficile QCD-66c26]
 gi|255091243|ref|ZP_05320721.1| GMP synthase [Clostridium difficile CIP 107932]
 gi|255312902|ref|ZP_05354485.1| GMP synthase [Clostridium difficile QCD-76w55]
 gi|255515661|ref|ZP_05383337.1| GMP synthase [Clostridium difficile QCD-97b34]
 gi|255648755|ref|ZP_05395657.1| GMP synthase [Clostridium difficile QCD-37x79]
 gi|260681975|ref|YP_003213260.1| GMP synthase [Clostridium difficile CD196]
 gi|260685573|ref|YP_003216706.1| GMP synthase [Clostridium difficile R20291]
 gi|306518872|ref|ZP_07405219.1| GMP synthase [Clostridium difficile QCD-32g58]
 gi|260208138|emb|CBA60429.1| GMP synthase [glutamine-hydrolyzing] [Clostridium difficile CD196]
 gi|260211589|emb|CBE01801.1| GMP synthase, glutamine-hydrolyzing [Clostridium difficile R20291]
          Length = 511

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 46/188 (24%), Gaps = 19/188 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             AL   SGG DSS           D +  +  D+G   K E      + +         
Sbjct: 216 KKALCALSGGVDSSVAAVLIHKAIGDNLTCIFVDHGLLRKNEGNDVERIFR--------- 266

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                E   + L  +              + +           R              L 
Sbjct: 267 -----EKFDINLIRVNAEDRFLSKLKGVSEPEAKRKIIGEEFIRVFEEESNKLGKMDFLV 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I   V E+ +      +                    +  PL  L K E  K+  ++
Sbjct: 322 QGTIYPDVIESGHGNAATIKSHH----NVGGIPEDVDFQEIVEPLRELFKDEVRKIGLEL 377

Query: 188 GGQDLVNL 195
           G ++ +  
Sbjct: 378 GIEEGLIF 385


>gi|262306063|gb|ACY45624.1| gln amidotransferase [Libinia emarginata]
          Length = 194

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 23/66 (34%), Gaps = 2/66 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +   L+L SGG DS+ C +          V  +  D G   K E        +++   + 
Sbjct: 39  SNKVLMLVSGGVDSTVCAALLHKALAEEQVIAVHIDNGFMRKNESLQVEQSLRRLGLKLT 98

Query: 66  KWKDSL 71
                L
Sbjct: 99  VVNARL 104


>gi|259503048|ref|ZP_05745950.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus antri DSM 16041]
 gi|259168914|gb|EEW53409.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus antri DSM 16041]
          Length = 377

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 48/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS        +   V  +             C     +  
Sbjct: 1   MTD--HSQTRVVVGMSGGVDSSVTALLLKRQGYDVIGVFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + K    + +    PN  V     I      
Sbjct: 57  KDVAKVAAKIGIPYYSVN---FEKEYWDRVFKYFIAEYKKGRTPNPDVICNKEIKFKAFI 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A +LG   +  G             H    A +          L       V  PL  
Sbjct: 114 EYANQLGADYVATGHYADLKRDADGRMHLMRAADQHKDQTYFLSQLDYHQLDKVLFPLAR 173

Query: 175 LKKYETWKLAQDIG 188
             K +  ++A++ G
Sbjct: 174 YTKPQIREIAKEAG 187


>gi|218232235|ref|YP_002369206.1| tRNA-specific 2-thiouridylase MnmA [Bacillus cereus B4264]
 gi|218160192|gb|ACK60184.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus B4264]
          Length = 372

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 53/193 (27%), Gaps = 10/193 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M + + +    ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MMNKLPQETRVVIGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            +      + +    PN  V     I      
Sbjct: 59  NDVIEVCNQIGIPYYAVN---FEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAFL 115

Query: 121 TLAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWL 175
             A  LG   +  G           Y   R       +T     L  E       PL  L
Sbjct: 116 EHAIALGADYVATGHYARVAYMDGEYKMLRGVDDNKDQTYFLNQLSQEQLSKTMFPLGEL 175

Query: 176 KKYETWKLAQDIG 188
           KK +  ++A++ G
Sbjct: 176 KKPQIREMAKEAG 188


>gi|157412374|ref|YP_001483240.1| GMP synthase [Prochlorococcus marinus str. MIT 9215]
 gi|226739661|sp|A8G223|GUAA_PROM2 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|157386949|gb|ABV49654.1| GMP synthase, PP-ATPase domain/subunit [Prochlorococcus marinus
           str. MIT 9215]
          Length = 528

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 49/192 (25%), Gaps = 19/192 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSST          +++  +  D G   K E E               
Sbjct: 224 NKKVLLALSGGVDSSTLAFLLNKAIGNQLTCMFIDQGFMRKGEPEF-------------- 269

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +   +   + +  +              + +           R              L
Sbjct: 270 LMNFFDKKFHIKVEYINARKRFISKLKGITEPEQKRKIIGEEFIRVFEEESNRLGPFQYL 329

Query: 127 GITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
               +   V E+  +       +     I++      L  +    +  PL  L K E  +
Sbjct: 330 AQGTLYPDVIESAGTNIDPKTGERIAVKIKSHHNVGGLPKDLQFKLVEPLRKLFKDEVRQ 389

Query: 183 LAQDIGGQDLVN 194
           +   +G    + 
Sbjct: 390 VGAALGLPAEII 401


>gi|15672819|ref|NP_266993.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactococcus lactis subsp. lactis Il1403]
 gi|12723762|gb|AAK04935.1|AE006317_4 tRNA-methyltransferase [Lactococcus lactis subsp. lactis Il1403]
 gi|326406382|gb|ADZ63453.1| 5-methylaminomethyl-2-thiouridylate-tRNA methyltransferase
           [Lactococcus lactis subsp. lactis CV56]
          Length = 384

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 49/194 (25%), Gaps = 11/194 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+         ++  SGG DSS       ++   V  +             C     +  
Sbjct: 9   MSGKSPAQTRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDENGVC--TATEDY 66

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 67  KDVAAVADQIGVPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 123

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMW 174
             A  LG   +  G      +      H    A          S +          PL  
Sbjct: 124 DYAMELGADYVATGHYAQVRTDENGIVHMLRGADNNKDQTYFLSQLTQEQLKKTMFPLGH 183

Query: 175 LKKYETWKLAQDIG 188
           L+K E  K+A+  G
Sbjct: 184 LEKPEVRKIAEKAG 197


>gi|150388488|ref|YP_001318537.1| argininosuccinate synthase [Alkaliphilus metalliredigens QYMF]
 gi|172052473|sp|A6TL10|ASSY_ALKMQ RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|149948350|gb|ABR46878.1| Argininosuccinate synthase [Alkaliphilus metalliredigens QYMF]
          Length = 414

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 59/214 (27%), Gaps = 23/214 (10%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K     +L +SGG D+S  L W  +     V     + GQ    E    +  +       
Sbjct: 4   KNKKKVVLAYSGGLDTSVILKWLEETYGYEVIAACVNVGQ---TEDFAAIKKKALATGAS 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             +   + E+ I         +  +        +   +     +  + +        +A 
Sbjct: 61  KAYIVDVTEEFITDYIF---PTLKAGAVYEDDYLLGTSFARPLISKKLVEIAEKEGAVAI 117

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV----HTPLMWLKKYE- 179
             G T         + +      +  I A     +L            H   + + K + 
Sbjct: 118 AHGATGKGNDQVRFEATIKALNPNLKIIAPWRTWDLKSREDCIDYAVQHGIPIPVTKKDI 177

Query: 180 ------TWKLAQDIGGQDLV-----NLILEESHT 202
                  W ++ + G  +       + I + S +
Sbjct: 178 YSRDENIWHISHEGGNLENPWNEHDDTIYKLSVS 211


>gi|260642609|ref|ZP_05416575.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides finegoldii DSM 17565]
 gi|260621349|gb|EEX44220.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides finegoldii DSM 17565]
          Length = 365

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 53/190 (27%), Gaps = 10/190 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIV 61
           +I++    LL  SGG DSS      L+    V  ++F + + N      E    + +++ 
Sbjct: 1   MIEENRRVLLGMSGGTDSSVAAMRLLEGGYEVTGITFRFYELNDSTEYLEDARSLAERLG 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                +         +    + +      T        +           + + + + AT
Sbjct: 61  IRHITYDARDVFRKQIIEYFVQEYMEG-RTPVPCTLCNNCLKWPLLAKVADEMGIFYIAT 119

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
             Y   +                D         +  +         +  P+  + K E  
Sbjct: 120 GHYVQKVELEGTYYITHAADPDKDQSFFLWGLKQDILR-------RILLPMGNITKVEAR 172

Query: 182 KLAQDIGGQD 191
             A + G Q 
Sbjct: 173 VWAAERGFQK 182


>gi|224372387|ref|YP_002606759.1| tRNA-specific 2-thiouridylase MnmA [Nautilia profundicola AmH]
 gi|223589875|gb|ACM93611.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Nautilia profundicola AmH]
          Length = 341

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 47/187 (25%), Gaps = 12/187 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            A   L+  SGG DS+  +    ++   V  +     +              K+  L  K
Sbjct: 1   MAKRVLVGVSGGVDSAMSVYLLKEQGYDVVGIYMKMHEGVNHVENVA-----KLNRLSKK 55

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                  + +             + +      +    PN        I          + 
Sbjct: 56  LGFEYVIEDVED------EFRKEVYEYFVESYKQGITPNPCAMCNIKIKFGIFMGFLEKY 109

Query: 127 GITNIVIGVC-ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           G      G     D       +  +         +  +    +  PL    K E  KLA 
Sbjct: 110 GCELAATGHYVRNDGEFLYQAKDQSKDQSYFLFGIKKKVLPKILFPLGEYTKDEIKKLAS 169

Query: 186 DIGGQDL 192
           +IG  + 
Sbjct: 170 EIGLDEF 176


>gi|213970042|ref|ZP_03398174.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudomonas syringae pv. tomato T1]
 gi|213925146|gb|EEB58709.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudomonas syringae pv. tomato T1]
          Length = 376

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 38/146 (26%), Gaps = 8/146 (5%)

Query: 1   MND---IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           M D      +    ++  SGG DSS      +++  +VE L     + +     C    R
Sbjct: 1   MRDPAPSNSEMKRVIVGMSGGVDSSVSAVLLMEQGYQVEGLFMKNWEEDDGTEYC--TAR 58

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           + + +          + H        +   +     +             +  R  I   
Sbjct: 59  EDLADAQAVCDRIGIKLHT--ANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFK 115

Query: 118 FAATLAYRLGITNIVIGVCETDYSGY 143
                A  LG   I  G         
Sbjct: 116 AFLDYALMLGADLIATGHYVRRRDID 141


>gi|27468222|ref|NP_764859.1| (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus epidermidis ATCC 12228]
 gi|57867112|ref|YP_188761.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus epidermidis
           RP62A]
 gi|282875953|ref|ZP_06284820.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus epidermidis SK135]
 gi|293366421|ref|ZP_06613099.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus epidermidis M23864:W2(grey)]
 gi|30173406|sp|Q8CSA5|MNMA_STAES RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|71153357|sp|Q5HNS9|MNMA_STAEQ RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|27315768|gb|AAO04903.1|AE016748_137 (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus epidermidis ATCC 12228]
 gi|57637770|gb|AAW54558.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus epidermidis RP62A]
 gi|281294978|gb|EFA87505.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus epidermidis SK135]
 gi|291319455|gb|EFE59823.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329735247|gb|EGG71539.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus epidermidis VCU045]
 gi|329737370|gb|EGG73624.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus epidermidis VCU028]
          Length = 372

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 49/189 (25%), Gaps = 11/189 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  K    ++  SGG DSS       ++   V  +             C     +   ++
Sbjct: 1   MSNKDIRVVVGMSGGVDSSVTAYLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDYNDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +          + +      +     +      + +    PN  V     I        A
Sbjct: 59  IAVCNQIGIPYYAVN---FEEQYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLEHA 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLKK 177
            +LG   +  G                               L  E    V  P+  ++K
Sbjct: 116 LKLGADYVATGHYARIRRHDDGHVEMLRGVDNNKDQTYFLNQLSQEQLSKVMFPIGDIEK 175

Query: 178 YETWKLAQD 186
            E  ++A++
Sbjct: 176 SEVRRIAEE 184


>gi|239929411|ref|ZP_04686364.1| GMP synthase [Streptomyces ghanaensis ATCC 14672]
 gi|291437737|ref|ZP_06577127.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Streptomyces ghanaensis ATCC 14672]
 gi|291340632|gb|EFE67588.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Streptomyces ghanaensis ATCC 14672]
          Length = 526

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 54/188 (28%), Gaps = 18/188 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             A+   SGG DS+   +        ++  +  D+G   K E E                
Sbjct: 225 KRAICGLSGGVDSAVAAALVQKAIGSQLTCVYVDHGLMRKGETEQVEK---------DFV 275

Query: 68  KDSLGEDHILPLA--ILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +  +  ++  +   L  +   S   +   K +        V  +    +V     A  
Sbjct: 276 AATGVQLKVVDASERFLAALKGVS---DPEEKRKIIGREFIRVFEQAQAEIVADEGPAVE 332

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                +   +               I++      L  +    +  PL  L K E   + Q
Sbjct: 333 ---FLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPEDLEFKLIEPLRQLFKDEVRMVGQ 389

Query: 186 DIGGQDLV 193
           ++G  D +
Sbjct: 390 ELGLPDEI 397


>gi|296120436|ref|YP_003628214.1| GMP synthase, large subunit [Planctomyces limnophilus DSM 3776]
 gi|296012776|gb|ADG66015.1| GMP synthase, large subunit [Planctomyces limnophilus DSM 3776]
          Length = 525

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 53/188 (28%), Gaps = 17/188 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS   +        ++  +  D G   K E        +K+ E    
Sbjct: 227 NSRVICGLSGGVDSSVVAALLYKAIGSQLSCIFVDNGLLRKGE-------CEKVRERFQ- 278

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H++          S L   V  + +   +   F+                  
Sbjct: 279 -NHFKTDLHVVD---ASHRFLSELAGVVDPQQKRKIIGRVFIEVFRKEAESITDARFLAQ 334

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G           +  G PD    TI+       L  +    +  PL  L K E  ++   
Sbjct: 335 GTLY----PDVIESGGSPDGPAATIKYHHNVGGLPEQLGFELIEPLRDLFKDEVRRMGLA 390

Query: 187 IGGQDLVN 194
           +G  + + 
Sbjct: 391 LGLSEELI 398


>gi|271962728|ref|YP_003336924.1| GMP synthase C terminal domain-containing protein
           [Streptosporangium roseum DSM 43021]
 gi|270505903|gb|ACZ84181.1| GMP synthase C terminal domain protein [Streptosporangium roseum
           DSM 43021]
          Length = 523

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 54/184 (29%), Gaps = 20/184 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+   +       DR+  +  D+G   K E      V +  V +     
Sbjct: 225 RAICALSGGVDSAVAAAMVQRAIGDRLTCVFVDHGLLRKGE---AEQVERDFVAVT---- 277

Query: 69  DSLGEDHILP--LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +  ++      L  +   +  +     I    +       R        A +A   
Sbjct: 278 --GVKLRVVDAQERFLKALDGVTDPEEKRKIIGREFIRVFEDEQR--------AIIADGP 327

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +               I++      L  +   ++  PL  L K E  +  ++
Sbjct: 328 VDFLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPDDLQFSLVEPLRALFKDEVRRAGEE 387

Query: 187 IGGQ 190
           +G  
Sbjct: 388 LGLP 391


>gi|262306059|gb|ACY45622.1| gln amidotransferase [Metajapyx subterraneus]
          Length = 197

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 23/61 (37%), Gaps = 2/61 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             LLL SGG DS+ C +      R D+   +  D G   K E +       K+   +   
Sbjct: 45  KVLLLVSGGVDSTVCAALLHKALREDQFIAVHIDNGFMRKNESQKVQQSLSKLGLRLRVV 104

Query: 68  K 68
            
Sbjct: 105 N 105


>gi|167970222|ref|ZP_02552499.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycobacterium tuberculosis H37Ra]
          Length = 367

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 40/181 (22%), Gaps = 4/181 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL-MPKWK 68
             L   SGG DSS   +  +D    V  +                    K       +  
Sbjct: 2   KVLAAMSGGVDSSVAAARMVDAGHEVVGVHMALWTAPGTLRTGSRGCCSKEDAADARRVA 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D LG    +      +     +  +          PN  V     I     +  A  LG 
Sbjct: 62  DVLGIPFYVW--DFAEKFKEDVINDFVSSYARGETPNPCVRCNQQIKFAALSARAVALGF 119

Query: 129 TNIVIGVCETDYSGY-PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +  G       G                  L  +       P+    K +    A   
Sbjct: 120 DTVATGHYARLSGGRLRRAVDRDKDQSYVLAVLTAQQLRHAAFPIGDTPKRQIRAEAARR 179

Query: 188 G 188
           G
Sbjct: 180 G 180


>gi|108803659|ref|YP_643596.1| GMP synthase [Rubrobacter xylanophilus DSM 9941]
 gi|108764902|gb|ABG03784.1| GMP synthase (glutamine-hydrolyzing) [Rubrobacter xylanophilus DSM
           9941]
          Length = 506

 Score = 51.5 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 55/185 (29%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+T          D++  +  D+G   + E        +++VE   +  
Sbjct: 213 RAICALSGGVDSATAAMLVHRAIGDKLTCVFVDHGLLRQNE-------AEQVVEAFRREA 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                        L  ++  +  +     + +  +                         
Sbjct: 266 GLPLVHVDARERFLDRLAGVTDPEAKRKIVGEEFIRVF------------EEEAGKIRDA 313

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G   +D           I++      L     + +  PL  L K E   +A ++G
Sbjct: 314 RFLVQGTLYSDVIESGTRDAARIKSHHNVGGLPEVMDLELVEPLRNLFKDEVRVVAAELG 373

Query: 189 GQDLV 193
             + +
Sbjct: 374 MPERL 378


>gi|329938153|ref|ZP_08287604.1| GMP synthase [Streptomyces griseoaurantiacus M045]
 gi|329302642|gb|EGG46532.1| GMP synthase [Streptomyces griseoaurantiacus M045]
          Length = 524

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 55/186 (29%), Gaps = 14/186 (7%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             A+   SGG DS+   +        ++  +  D+G   K E E          ++   +
Sbjct: 223 KRAICGLSGGVDSAVAAALVQKAIGSQLTCVYVDHGLMRKGETE----------QVEKDF 272

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             + G    +  A    +   +   +   K +        V  +    ++     A    
Sbjct: 273 VAATGVQLKVVDAEERFLKALAGVSDPEQKRKIIGREFIRVFEQAQAEIIADEGPAVE-- 330

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   +               I++      L  +    +  PL  L K E   + Q++
Sbjct: 331 -FLVQGTLYPDVVESGGGTGAANIKSHHNVGGLPEDLEFQLIEPLRKLFKDEVRMVGQEL 389

Query: 188 GGQDLV 193
           G  + +
Sbjct: 390 GLPEEI 395


>gi|302504114|ref|XP_003014016.1| hypothetical protein ARB_07736 [Arthroderma benhamiae CBS 112371]
 gi|291177583|gb|EFE33376.1| hypothetical protein ARB_07736 [Arthroderma benhamiae CBS 112371]
          Length = 405

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 3/77 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + +    LL +SGG D+S  L+W L++   V     D GQ    + +        +    
Sbjct: 313 MAQKEKVLLAYSGGLDTSCILAWLLEQGHEVVCFLADVGQ--AEDFKEAERKALAVGA-K 369

Query: 65  PKWKDSLGEDHILPLAI 81
               + L ++ +  L  
Sbjct: 370 KLVVEDLKKEFVEDLCF 386


>gi|228902924|ref|ZP_04067065.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis IBL 4222]
 gi|228967471|ref|ZP_04128500.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis serovar sotto str. T04001]
 gi|228792248|gb|EEM39821.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis serovar sotto str. T04001]
 gi|228856708|gb|EEN01227.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis IBL 4222]
          Length = 376

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 54/194 (27%), Gaps = 13/194 (6%)

Query: 3   DIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           D++ K P     ++  SGG DSS       ++   V  +             C     + 
Sbjct: 4   DMMNKLPHETRVVIGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVC--TATED 61

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
             +++          + +            +      + +    PN  V     I     
Sbjct: 62  YNDVIEVCNQIGIPYYAVN---FEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAF 118

Query: 120 ATLAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
              A  LG   +  G           Y   R       +T     L  E       PL  
Sbjct: 119 LEHAIALGADYVATGHYARVAYMDGEYKMLRGVDDNKDQTYFLNQLSQEQLSKTMFPLGE 178

Query: 175 LKKYETWKLAQDIG 188
           LKK +  ++A++ G
Sbjct: 179 LKKPQIREMAKEAG 192


>gi|222099125|ref|YP_002533693.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermotoga neapolitana DSM 4359]
 gi|254811469|sp|B9KBD1|MNMA_THENN RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|221571515|gb|ACM22327.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermotoga neapolitana DSM 4359]
          Length = 358

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 57/187 (30%), Gaps = 14/187 (7%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI-------VELMP 65
           +  SGG DS+  L   L     V+          + E   +  ++KK+        + + 
Sbjct: 5   VALSGGVDSAVALYLLLKEGHEVKAFHMKTK---EDEFFLKKEIKKKVCCSPSDTADAIR 61

Query: 66  KWKDSLGEDHILPLAI-LGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             +    E  I+ +     +       +++   +  N   +     +   F+ +  +  +
Sbjct: 62  IARSLGVEIEIVDVREVFREKVIEPFKRDLLRGLTPNPCVHCNRYVKFGYFMDYVLSQGF 121

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW---LKKYETW 181
               +     V  +   G    +       + +  L       +   L       K E  
Sbjct: 122 DAFASGHYARVEFSGKYGKKVIKKGVDGKKDQSYFLARIEPWRIEKLLFPNGIYTKEEIR 181

Query: 182 KLAQDIG 188
           ++A++ G
Sbjct: 182 RIAEEAG 188


>gi|254526370|ref|ZP_05138422.1| GMP synthase [Prochlorococcus marinus str. MIT 9202]
 gi|221537794|gb|EEE40247.1| GMP synthase [Prochlorococcus marinus str. MIT 9202]
          Length = 528

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 51/192 (26%), Gaps = 19/192 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSST          +++  +  D G   K E E  +    K       
Sbjct: 224 NKKVLLALSGGVDSSTLAFLLNKAIGNQLTCMFIDQGFMRKGEPEFLMNFFDK---KFHI 280

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             + +                +   +   +  ++          R              L
Sbjct: 281 KVEYINARKRFI---AKLKGITDPEQKRKIIGEE--------FIRVFEEESNRLGPFQYL 329

Query: 127 GITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
               +   V E+  +       +     I++      L  +    +  PL  L K E  +
Sbjct: 330 AQGTLYPDVIESAGTNIDPKTGERIAVKIKSHHNVGGLPKDLQFKLVEPLRKLFKDEVRQ 389

Query: 183 LAQDIGGQDLVN 194
           +   +G    + 
Sbjct: 390 VGAALGLPAEII 401


>gi|329297165|ref|ZP_08254501.1| tRNA-specific 2-thiouridylase MnmA [Plautia stali symbiont]
          Length = 370

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 50/184 (27%), Gaps = 13/184 (7%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--------RLCVR 57
                 ++  SGG DSS        +  +VE L     + +  E  C           V 
Sbjct: 4   NSQKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAADDLADAQAVC 63

Query: 58  KKIVELMPKWK-----DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN 112
            K+   + K            +H L     G   +  +  N  +K +          G +
Sbjct: 64  DKLGIKLHKINFAAEYWDNVFEHFLEEYKAGRTPNPDILCNKEIKFKAFLEFAADDLGAD 123

Query: 113 IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
            I        A   G + ++ G+       Y        +  ++   +G      V    
Sbjct: 124 YIATGHYVRRADVDGTSQLLRGLDGNKDQSYFLYTLSHQQIAQSLFPVGKLEKPEVRRIA 183

Query: 173 MWLK 176
             L 
Sbjct: 184 EQLD 187


>gi|321263400|ref|XP_003196418.1| argininosuccinate synthase [Cryptococcus gattii WM276]
 gi|317462894|gb|ADV24631.1| argininosuccinate synthase, putative [Cryptococcus gattii WM276]
          Length = 429

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 2/69 (2%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
          M    +K    +L +SGG D+S  L W +++   V     D GQ  + + E       K 
Sbjct: 1  MVATGEKKGKVILAYSGGLDTSCILLWLIEQGYEVVAYMADVGQ--EEDFEAARAKAMKC 58

Query: 61 VELMPKWKD 69
            +     D
Sbjct: 59 GAVGFHLAD 67


>gi|154496654|ref|ZP_02035350.1| hypothetical protein BACCAP_00946 [Bacteroides capillosus ATCC
           29799]
 gi|150273906|gb|EDN01006.1| hypothetical protein BACCAP_00946 [Bacteroides capillosus ATCC
           29799]
          Length = 168

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 1/67 (1%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +  +     ++  +  ++G   K E E  + V +  ++    +
Sbjct: 37  KKVLLALSGGVDSSVVAALLIKAIGKQLVCVHVNHGLLRKGEPEQVVKVFRDEMDANLVY 96

Query: 68  KDSLGED 74
            D++   
Sbjct: 97  VDAVDRF 103


>gi|257094644|ref|YP_003168285.1| Argininosuccinate synthase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257047168|gb|ACV36356.1| Argininosuccinate synthase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 409

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 50/157 (31%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +     A+L +SGG D+S  L W  D     V T + D GQ +++E   R    +  +  
Sbjct: 1   MSDIKKAVLAYSGGLDTSVILKWLQDTYGCEVVTFTADLGQGDELEA-ARPKALQFGIAP 59

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + + L E+ +            + T      +   ++    +  R I         A
Sbjct: 60  ENIYIEDLREEFVRDYVF---PMFRANTVYEGEYLLGTSIARPLIAKRMIEIANLTGAEA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         +   Y       I A     +L
Sbjct: 117 IAHGATGKGNDQVRFELGAYALRPDIRIIAPWREWDL 153


>gi|325269171|ref|ZP_08135791.1| GMP synthase [Prevotella multiformis DSM 16608]
 gi|324988558|gb|EGC20521.1| GMP synthase [Prevotella multiformis DSM 16608]
          Length = 514

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 57/187 (30%), Gaps = 21/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS C           +  +  D+G   K E    +   K +       
Sbjct: 214 DRVILGLSGGVDSSVCAVLLNKAIGKNLTCIFVDHGMLRKNEFAKVMEAYKGLG------ 267

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      L ++G  +     K++    +        + GR+ + +  A        
Sbjct: 268 -----------LNVIGVDASEKFFKDLEGVTEPEQKRK--IIGRDFVEVFNAEAKKIT-D 313

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +  G    D           I++      L  E  + +  PL WL K E  ++   +
Sbjct: 314 ARWLAQGTIYPDRIESLSITGMIIKSHHNVGGLPEEMRLQLCEPLRWLFKDEVRRVGYQL 373

Query: 188 GGQDLVN 194
           G  + + 
Sbjct: 374 GMPERLI 380


>gi|317121131|ref|YP_004101134.1| GMP synthase (glutamine-hydrolyzing) [Thermaerobacter marianensis
           DSM 12885]
 gi|315591111|gb|ADU50407.1| GMP synthase (glutamine-hydrolyzing) [Thermaerobacter marianensis
           DSM 12885]
          Length = 526

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 54/185 (29%), Gaps = 17/185 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            AL   SGG DS+   +        R+  +  D G   + E+E    +   +   +    
Sbjct: 230 RALCALSGGVDSAVAAALVHRAIGPRLICVFVDTGLLREGEVEEVRSIFTGLGMDLRVVD 289

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                        L  +   +  +     + +  +       R +         A    I
Sbjct: 290 ARD--------RFLAALDGLADPEAKRKAVGETFIRVFEEEARRL--------EAQVGAI 333

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G    D          TI++      L  +    +  PL  L K E  ++ + +G
Sbjct: 334 PFLVQGTTYPDVIESGGGAAATIKSHHNVGGLPADLEFQLVEPLRDLFKDEVREVGRRLG 393

Query: 189 GQDLV 193
               +
Sbjct: 394 LPPAI 398


>gi|307824462|ref|ZP_07654687.1| tRNA methyl transferase-like protein [Methylobacter tundripaludum
          SV96]
 gi|307734446|gb|EFO05298.1| tRNA methyl transferase-like protein [Methylobacter tundripaludum
          SV96]
          Length = 348

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 30/79 (37%), Gaps = 3/79 (3%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ---RNKVELECRLCVRKKIV 61
          + K   A+ L SGG DS       +++   VE ++F  G     +   +      + K  
Sbjct: 1  MSKQRKAVALISGGLDSMLAAKTIMEQGVHVEGINFFTGFCVEGHTHAIRANDKAKPKRN 60

Query: 62 ELMPKWKDSLGEDHILPLA 80
            +   +    + HI+ + 
Sbjct: 61 NSLWVAEQLGMKLHIVDVI 79


>gi|292490681|ref|YP_003526120.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Nitrosococcus halophilus Nc4]
 gi|291579276|gb|ADE13733.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Nitrosococcus halophilus Nc4]
          Length = 347

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 49/180 (27%), Gaps = 10/180 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ---RNKVELECRLCVRKKIV 61
           ++K   A+ L SGG DS        ++   VE ++F  G     +   +  +   R K  
Sbjct: 1   MEKQRKAVALISGGLDSMLAAKVMQEQGIHVEGINFFTGFCVEGHTHAIRNKDKKRAKRN 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
             +   +    + H++ +              V                     +  A  
Sbjct: 61  NALWAAEQLGIKLHMVEVID-------EYKDVVLNPKYGYGAHLNPCLDCKCFMVTKALA 113

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
                G   IV G                + A E+  +  +   +        L + E W
Sbjct: 114 WMKENGFDFIVTGEVVGQRPKSQRADTMPVVARESGAHDLLLRPLCAKNLPPTLPEREGW 173


>gi|291561395|emb|CBL40194.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain or B
           subunit/GMP synthase (glutamine-hydrolyzing), N-terminal
           domain or A subunit [butyrate-producing bacterium SS3/4]
          Length = 514

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 49/190 (25%), Gaps = 22/190 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS           D++  +  D+G            +RK   + + +
Sbjct: 215 NGKVLCALSGGVDSSVAAVMLAKAVGDQLTCVFVDHG-----------LLRKNEGDEVEE 263

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G   +  + +            V    +               F+      A ++
Sbjct: 264 VFGPNGPYDLHFIRVNAQQRFYDKLAGVEEPERK-------RKIIGEEFIRVFEEEAKKI 316

Query: 127 GITNIV---IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           G  + +       +   SG                         +  PL  L K E  K 
Sbjct: 317 GAVDFLVQGTIYPDVVESGLGGESAVIKSHHNVGGLPDYVDFKEIIEPLRDLFKDEVRKA 376

Query: 184 AQDIGGQDLV 193
             ++G  + +
Sbjct: 377 GLELGIPEKL 386


>gi|229013614|ref|ZP_04170745.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus mycoides DSM 2048]
 gi|229062091|ref|ZP_04199416.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus AH603]
 gi|229169139|ref|ZP_04296854.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus AH621]
 gi|228614367|gb|EEK71477.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus AH621]
 gi|228717243|gb|EEL68918.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus AH603]
 gi|228747673|gb|EEL97545.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus mycoides DSM 2048]
          Length = 376

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 53/194 (27%), Gaps = 13/194 (6%)

Query: 3   DIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           D++ K P     ++  SGG DSS       ++   V  +             C     + 
Sbjct: 4   DMMNKLPQETRVVIGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDANGVC--TATED 61

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
             +++          + +            +      + +    PN  V     I     
Sbjct: 62  YNDVIEVCNQIGIPYYAVN---FEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAF 118

Query: 120 ATLAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
              A  LG   +  G           Y   R       +T     L  E       PL  
Sbjct: 119 LEHAIALGADYVATGHYARVAYMDGEYKMLRGVDDNKDQTYFLNQLSQEQLSKTMFPLGE 178

Query: 175 LKKYETWKLAQDIG 188
           LKK +  ++A + G
Sbjct: 179 LKKPQIREMATEAG 192


>gi|152992636|ref|YP_001358357.1| tRNA-specific 2-thiouridylase MnmA [Sulfurovum sp. NBC37-1]
 gi|205828996|sp|A6Q941|MNMA_SULNB RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|151424497|dbj|BAF72000.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Sulfurovum sp. NBC37-1]
          Length = 340

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 37/129 (28%), Gaps = 10/129 (7%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               L+  SGG DS+            VE +      +     E      +K+ + +   
Sbjct: 3   KGKVLVGLSGGVDSTVTAVLLQKEGYEVEGVYMRLHDK-PGYHEDNWGKVQKVADYLRI- 60

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    +    L +  ++++ +      +    PN  V     I        A  LG
Sbjct: 61  --------KVHFHDLSEAFNANVYEYFVESYKKGLTPNPCVMCNRTIKFGKMVEFADTLG 112

Query: 128 ITNIVIGVC 136
           I  +  G  
Sbjct: 113 IEFVATGHY 121


>gi|20095126|ref|NP_614973.1| ATPase [Methanopyrus kandleri AV19]
 gi|19888424|gb|AAM02903.1| Predicted ATPase of the PP-loop superfamily implicated in cell
           cycle control [Methanopyrus kandleri AV19]
          Length = 294

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 23/57 (40%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
              ++ +   L+  SGG DS   L  AL   D V  L+ D G  +       +  R+
Sbjct: 45  RKALENSEKVLVAVSGGLDSLAALGLALRICDEVVALTVDTGALHPEAWRRIILARR 101


>gi|229135219|ref|ZP_04264018.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus BDRD-ST196]
 gi|228648261|gb|EEL04297.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus BDRD-ST196]
          Length = 376

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 53/194 (27%), Gaps = 13/194 (6%)

Query: 3   DIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           D++ K P     ++  SGG DSS       ++   V  +             C     + 
Sbjct: 4   DMMNKLPQETRVVIGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDANGVC--TATED 61

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
             +++          + +            +      + +    PN  V     I     
Sbjct: 62  YNDVIEVCNQIGIPYYAVN---FEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAF 118

Query: 120 ATLAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
              A  LG   +  G           Y   R       +T     L  E       PL  
Sbjct: 119 LEHAIALGADYVATGHYARVAYMDGEYKMLRGVDDNKDQTYFLNQLSQEQLSKTMFPLGE 178

Query: 175 LKKYETWKLAQDIG 188
           LKK +  ++A + G
Sbjct: 179 LKKPQIREMATEAG 192


>gi|300728215|ref|ZP_07061583.1| GMP synthase [Prevotella bryantii B14]
 gi|299774450|gb|EFI71074.1| GMP synthase [Prevotella bryantii B14]
          Length = 514

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 60/188 (31%), Gaps = 21/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS C +         +  +  D+G   K E        KK++E    
Sbjct: 213 NDRVILGLSGGVDSSVCATLLNKAIGKNLTCIFVDHGMLRKDE-------FKKVMEAYNG 265

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              ++                +S      ++   +      + GR+ + +  A       
Sbjct: 266 LGLNVI------------GVDASEKFFKDLEGVTDPEQKRKIIGRDFVEVFNAEAKKIT- 312

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G    D           I++      L  E H+ +  PL WL K E  ++  +
Sbjct: 313 DAKWLAQGTIYPDRIESLSITGMVIKSHHNVGGLPKEMHLQLCEPLKWLFKDEVRRVGYE 372

Query: 187 IGGQDLVN 194
           +G  + + 
Sbjct: 373 LGMPERLI 380


>gi|255320379|ref|ZP_05361563.1| argininosuccinate synthase [Acinetobacter radioresistens SK82]
 gi|262379339|ref|ZP_06072495.1| argininosuccinate synthase [Acinetobacter radioresistens SH164]
 gi|255302574|gb|EET81807.1| argininosuccinate synthase [Acinetobacter radioresistens SK82]
 gi|262298796|gb|EEY86709.1| argininosuccinate synthase [Acinetobacter radioresistens SH164]
          Length = 447

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 23/61 (37%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              + FSGG D+S  L W   +       + + GQ ++ + +      +    +  +  
Sbjct: 15 KKVGIAFSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAENYGAVKARLI 74

Query: 69 D 69
          D
Sbjct: 75 D 75


>gi|229163345|ref|ZP_04291297.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus R309803]
 gi|228620126|gb|EEK77000.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus R309803]
          Length = 372

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 53/193 (27%), Gaps = 10/193 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M + + +    ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MMNKLPQETRVVIGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            +      + +    PN  V     I      
Sbjct: 59  NDVIEVCNQIGIPYYAVN---FEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAFL 115

Query: 121 TLAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWL 175
             A  LG   +  G           Y   R       +T     L  E       PL  L
Sbjct: 116 EHAIALGADYVATGHYARVAYMDGEYKMLRGVDDNKDQTYFLNQLSQEQLSKTMFPLGEL 175

Query: 176 KKYETWKLAQDIG 188
           KK +  ++A++ G
Sbjct: 176 KKPQIREMAKEAG 188


>gi|228923148|ref|ZP_04086439.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228941564|ref|ZP_04104113.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis serovar berliner ATCC 10792]
 gi|228954681|ref|ZP_04116704.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis serovar kurstaki str. T03a001]
 gi|228960668|ref|ZP_04122313.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis serovar pakistani str. T13001]
 gi|228974494|ref|ZP_04135061.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis serovar thuringiensis str.
           T01001]
 gi|228981088|ref|ZP_04141389.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis Bt407]
 gi|229048104|ref|ZP_04193677.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus AH676]
 gi|229071905|ref|ZP_04205116.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus F65185]
 gi|229081661|ref|ZP_04214156.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus Rock4-2]
 gi|229111869|ref|ZP_04241415.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus Rock1-15]
 gi|229129677|ref|ZP_04258645.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus BDRD-Cer4]
 gi|229146967|ref|ZP_04275331.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus BDRD-ST24]
 gi|229152600|ref|ZP_04280789.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus m1550]
 gi|229180672|ref|ZP_04308012.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus 172560W]
 gi|229192608|ref|ZP_04319569.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus ATCC 10876]
 gi|228590915|gb|EEK48773.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus ATCC 10876]
 gi|228602817|gb|EEK60298.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus 172560W]
 gi|228630861|gb|EEK87501.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus m1550]
 gi|228636566|gb|EEK93032.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus BDRD-ST24]
 gi|228653794|gb|EEL09664.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus BDRD-Cer4]
 gi|228671625|gb|EEL26923.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus Rock1-15]
 gi|228701665|gb|EEL54156.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus Rock4-2]
 gi|228711201|gb|EEL63165.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus F65185]
 gi|228723259|gb|EEL74631.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus AH676]
 gi|228778629|gb|EEM26895.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis Bt407]
 gi|228785211|gb|EEM33223.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis serovar thuringiensis str.
           T01001]
 gi|228799032|gb|EEM46004.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis serovar pakistani str. T13001]
 gi|228805008|gb|EEM51604.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis serovar kurstaki str. T03a001]
 gi|228818120|gb|EEM64196.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis serovar berliner ATCC 10792]
 gi|228836527|gb|EEM81877.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1]
          Length = 376

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 54/194 (27%), Gaps = 13/194 (6%)

Query: 3   DIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           D++ K P     ++  SGG DSS       ++   V  +             C     + 
Sbjct: 4   DMMNKLPHETRVVIGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVC--TATED 61

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
             +++          + +            +      + +    PN  V     I     
Sbjct: 62  YNDVIEVCNQIGIPYYAVN---FEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAF 118

Query: 120 ATLAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
              A  LG   +  G           Y   R       +T     L  E       PL  
Sbjct: 119 LEHAIALGADYVATGHYARVAYMDGEYKMLRGVDDNKDQTYFLNQLSQEQLSKTMFPLGE 178

Query: 175 LKKYETWKLAQDIG 188
           LKK +  ++A++ G
Sbjct: 179 LKKPQIREMAKEAG 192


>gi|254509031|ref|ZP_05121136.1| thiamine biosynthesis/tRNA modification protein ThiI [Vibrio
           parahaemolyticus 16]
 gi|219548066|gb|EED25086.1| thiamine biosynthesis/tRNA modification protein ThiI [Vibrio
           parahaemolyticus 16]
          Length = 482

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  +V    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGP-------AHEI--GVKQVSHYLWNK 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G       +       S   + V  +I +             +F+  A  +A +  I  
Sbjct: 231 YG-------SSAKVRFISVDFEPVVAEILEKVDDGQMGVILKRMFMRAAGMVASKFKIEA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K +   LA++IG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIINLAREIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|218439824|ref|YP_002378153.1| GMP synthase [Cyanothece sp. PCC 7424]
 gi|226738434|sp|B7K8T7|GUAA_CYAP7 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|218172552|gb|ACK71285.1| GMP synthase, large subunit [Cyanothece sp. PCC 7424]
          Length = 542

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 52/190 (27%), Gaps = 19/190 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST          D++  +  D G   K E E  + +           
Sbjct: 239 KRVLLALSGGVDSSTLAFLLHRAIGDQLTCMFIDQGFMRKGEPERLMEIFDH-------- 290

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    +P+  +                ++          +              L 
Sbjct: 291 ------QFHIPVVYVNSREQFLEQLKGVTDPEEKRRLIGHEFIKVFEEESNRLGPFDYLA 344

Query: 128 ITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              +   V E+  S       +     I++      L       +  PL  L K E  K+
Sbjct: 345 QGTLYPDVIESADSNVDPQTGERVAVKIKSHHNVGGLPKNLRFKLVEPLRKLFKDEVRKV 404

Query: 184 AQDIGGQDLV 193
           A+ IG  + +
Sbjct: 405 ARSIGLPEEI 414


>gi|170288218|ref|YP_001738456.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermotoga sp. RQ2]
 gi|205828981|sp|B1L8X5|MNMA_THESQ RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|170175721|gb|ACB08773.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermotoga sp. RQ2]
          Length = 358

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 57/187 (30%), Gaps = 14/187 (7%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI-------VELMP 65
           +  SGG DS+  L   L     V+          + E   +  ++KK+        + + 
Sbjct: 5   VALSGGVDSAVALYLLLKEGHEVKAFHMKTK---EDEFFLKKEIKKKVCCSPSDTADAIR 61

Query: 66  KWKDSLGEDHILPLAI-LGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             +    E  I+ +     +       +++   +  N   +     +   F+ +  +  +
Sbjct: 62  IARSLGVEIEIVDVREVFREKVIEPFKRDLLRGLTPNPCVHCNRYVKFGYFMDYVLSQGF 121

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW---LKKYETW 181
               +     V  +   G    +       + +  L       +   L       K E  
Sbjct: 122 DAFASGHYARVEFSGKYGKKVIKKGVDGKKDQSYFLARIEPWRIEKLLFPNGIYTKEEIR 181

Query: 182 KLAQDIG 188
           ++A++ G
Sbjct: 182 RIAEEAG 188


>gi|119898477|ref|YP_933690.1| argininosuccinate synthase [Azoarcus sp. BH72]
 gi|166219945|sp|A1K7J8|ASSY_AZOSB RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|119670890|emb|CAL94803.1| ArgG protein [Azoarcus sp. BH72]
          Length = 409

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 50/157 (31%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  ++E   R    K  ++ 
Sbjct: 1   MSDVKKVVLAYSGGLDTSVILKWLQDTYQCEVVTFTADLGQGEELEP-ARQKALKFGIKP 59

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + D L E+ +            + T      +   ++    +  R I         A
Sbjct: 60  ENIFIDDLREEFVRDFVF---PMFRANTIYEGEYLLGTSIARPLIAKRQIEIARATGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         +   Y       + A     +L
Sbjct: 117 VSHGATGKGNDQVRFELGYYALMPGVKVIAPWREWDL 153


>gi|10639674|emb|CAC11646.1| thiazole biosynthesis protein Thi I related protein [Thermoplasma
           acidophilum]
          Length = 469

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 60/186 (32%), Gaps = 29/186 (15%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             + L SGG DS       + R     +   S  Y     V+L   + V KK+VE    +
Sbjct: 158 KYISLVSGGIDSPVSTWMIMKRGSPCDILFCSLSY----PVDLRPFVDVVKKLVERWAPY 213

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +        + +A    +  +       M I+     +     R I  +     +A   G
Sbjct: 214 RKP-----RIYVADCRSLIRT-------MVIEGRTKYSNVTFKRVIYRIA--EKIALENG 259

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      S          +  E    +     V +  PL+ + K E   +A+ I
Sbjct: 260 YNGIVTGESLGQVSS---------QTAENLKAIESGIGVPILRPLIGMDKDEVVDMARRI 310

Query: 188 GGQDLV 193
           G    +
Sbjct: 311 GTFPEL 316


>gi|228910232|ref|ZP_04074050.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis IBL 200]
 gi|228849396|gb|EEM94232.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis IBL 200]
          Length = 376

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 54/194 (27%), Gaps = 13/194 (6%)

Query: 3   DIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           D++ K P     ++  SGG DSS       ++   V  +             C     + 
Sbjct: 4   DMMNKLPHETRVVIGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVC--TATED 61

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
             +++          + +            +      + +    PN  V     I     
Sbjct: 62  YNDVIEVCNQIGIPYYAVN---FEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAF 118

Query: 120 ATLAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
              A  LG   +  G           Y   R       +T     L  E       PL  
Sbjct: 119 LEHAIALGADYVATGHYARVAYMDGEYKMLRGVDDNKDQTYFLNQLSQEQLSKTMFPLGE 178

Query: 175 LKKYETWKLAQDIG 188
           LKK +  ++A++ G
Sbjct: 179 LKKPQIREMAKEAG 192


>gi|229186636|ref|ZP_04313797.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus BGSC 6E1]
 gi|228596895|gb|EEK54554.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus BGSC 6E1]
          Length = 376

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 54/194 (27%), Gaps = 13/194 (6%)

Query: 3   DIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           D++ K P     ++  SGG DSS       ++   V  +             C     + 
Sbjct: 4   DMMNKLPHETRVVIGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVC--TATED 61

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
             +++          + +            +      + +    PN  V     I     
Sbjct: 62  YNDVIEVCNQIGIPYYAVN---FEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAF 118

Query: 120 ATLAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
              A  LG   +  G           Y   R       +T     L  E       PL  
Sbjct: 119 LEHAIALGADYVATGHYARVAYMDGEYKMLRGVDDNKDQTYFLNQLSQEQLSKTMFPLGE 178

Query: 175 LKKYETWKLAQDIG 188
           LKK +  ++A++ G
Sbjct: 179 LKKPQIREMAKEAG 192


>gi|229198523|ref|ZP_04325227.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus m1293]
 gi|228585026|gb|EEK43140.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus m1293]
          Length = 376

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 54/194 (27%), Gaps = 13/194 (6%)

Query: 3   DIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           D++ K P     ++  SGG DSS       ++   V  +             C     + 
Sbjct: 4   DMMNKLPHETRVVIGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVC--TATED 61

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
             +++          + +            +      + +    PN  V     I     
Sbjct: 62  YNDVIEVCNQIGIPYYAVN---FEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAF 118

Query: 120 ATLAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
              A  LG   +  G           Y   R       +T     L  E       PL  
Sbjct: 119 LEHAIALGADYVATGHYARVAYMDGEYKMLRGVDDNKDQTYFLNQLSQEQLSKTMFPLGE 178

Query: 175 LKKYETWKLAQDIG 188
           LKK +  ++A++ G
Sbjct: 179 LKKPQIREMAKEAG 192


>gi|170028584|ref|XP_001842175.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167876297|gb|EDS39680.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 1322

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 64/202 (31%), Gaps = 9/202 (4%)

Query: 1    MNDIIKKAPSALLLF-SGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVR 57
            MN       ++++L  SGG DS+ C +   +  + ++V  +  D G   K E        
Sbjct: 860  MNLGASATTTSVILLVSGGVDSTVCAALLRNALKPEQVIAVHIDNGFMRKNESAAVEKSL 919

Query: 58   KKIV-ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP---NTFVPGRNI 113
            +++  +L+ +            + + G + +            ++      + FV   N 
Sbjct: 920  RELGVDLLVRDAFYKFTRGTTTIKVPGSLYNQDTPMLCQTISPEDKRKIIGDVFVKVSNE 979

Query: 114  IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTP 171
            +                 +        S     + DTI+       L  +      V  P
Sbjct: 980  VLKDLNLNAEEVFLAQGTLRPDLIESASSLVSTKADTIKTHHNDTELIRKLREAGRVIEP 1039

Query: 172  LMWLKKYETWKLAQDIGGQDLV 193
            L    K E  +L  ++G    +
Sbjct: 1040 LQEFHKDEVRQLGYELGLPAHL 1061


>gi|118479554|ref|YP_896705.1| tRNA-specific 2-thiouridylase MnmA [Bacillus thuringiensis str. Al
           Hakam]
 gi|228929441|ref|ZP_04092462.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis serovar pondicheriensis BGSC
           4BA1]
 gi|228935717|ref|ZP_04098530.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis serovar andalousiensis BGSC
           4AW1]
 gi|228948110|ref|ZP_04110394.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228987648|ref|ZP_04147762.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|229093467|ref|ZP_04224570.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus Rock3-42]
 gi|229123937|ref|ZP_04253129.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus 95/8201]
 gi|229141133|ref|ZP_04269675.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus BDRD-ST26]
 gi|229158012|ref|ZP_04286083.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus ATCC 4342]
 gi|118418779|gb|ABK87198.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis str. Al Hakam]
 gi|228625465|gb|EEK82221.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus ATCC 4342]
 gi|228642411|gb|EEK98700.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus BDRD-ST26]
 gi|228659239|gb|EEL14887.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus 95/8201]
 gi|228689938|gb|EEL43742.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus Rock3-42]
 gi|228772108|gb|EEM20560.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|228811468|gb|EEM57805.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228823955|gb|EEM69774.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis serovar andalousiensis BGSC
           4AW1]
 gi|228830229|gb|EEM75845.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis serovar pondicheriensis BGSC
           4BA1]
          Length = 376

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 54/194 (27%), Gaps = 13/194 (6%)

Query: 3   DIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           D++ K P     ++  SGG DSS       ++   V  +             C     + 
Sbjct: 4   DMMNKLPHETRVVIGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVC--TATED 61

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
             +++          + +            +      + +    PN  V     I     
Sbjct: 62  YNDVIEVCNQIGIPYYAVN---FEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAF 118

Query: 120 ATLAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
              A  LG   +  G           Y   R       +T     L  E       PL  
Sbjct: 119 LEHAIALGADYVATGHYARVAYMDGEYKMLRGVDDNKDQTYFLNQLSQEQLSKTMFPLGE 178

Query: 175 LKKYETWKLAQDIG 188
           LKK +  ++A++ G
Sbjct: 179 LKKPQIREMAKEAG 192


>gi|94676746|ref|YP_588863.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Baumannia cicadellinicola str. Hc (Homalodisca
           coagulata)]
 gi|166991122|sp|Q1LT51|MNMA_BAUCH RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|94219896|gb|ABF14055.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Baumannia cicadellinicola str. Hc (Homalodisca
           coagulata)]
          Length = 368

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 51/186 (27%), Gaps = 9/186 (4%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS      L +   VE L     + +  E  C   V K + +     
Sbjct: 5   NKKVIVGMSGGVDSSVSALLLLQQGYTVEGLFMKNWEEDDHEQYC--TVAKDLADAQAVC 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                  H +      +   +     +A            +  +NI F VF       LG
Sbjct: 63  NQLGIILHKVN--FAAEYWDNVFEYFLAEYQVGRTPNPDILCNKNIKFKVFLDFATQNLG 120

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G            R      +          +G +       PL  L K    +
Sbjct: 121 ADYIATGHYVIRKDINGKSRLLRGLDNQKDQSYFLYTIGYQQMARCFFPLGKLNKLRVRE 180

Query: 183 LAQDIG 188
           +A   G
Sbjct: 181 IAAKQG 186


>gi|73919895|sp|Q812R6|MNMA_BACCR RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 371

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 53/193 (27%), Gaps = 11/193 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN +  +    ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MNKLPHET-RVVIGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            +      + +    PN  V     I      
Sbjct: 58  NDVIEVCNQIGIPYYAVN---FEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWL 175
             A  LG   +  G           Y   R       +T     L  E       PL  L
Sbjct: 115 EHAIALGADYVATGHYARVAYMDGEYKMLRGVDDNKDQTYFLNQLSQEQLSKTMFPLGEL 174

Query: 176 KKYETWKLAQDIG 188
           KK +  ++A++ G
Sbjct: 175 KKPQIREMAKEAG 187


>gi|56963351|ref|YP_175082.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Bacillus clausii KSM-K16]
 gi|81366419|sp|Q5WHN4|MNMA_BACSK RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|56909594|dbj|BAD64121.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Bacillus clausii KSM-K16]
          Length = 364

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 44/185 (23%), Gaps = 12/185 (6%)

Query: 5   IKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +KK      ++  SGG DSS       ++   V  +       +     C     +   +
Sbjct: 1   MKKREDTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDSNDSGFCS--ATEDYED 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +    +      + +             T  +             +     I        
Sbjct: 59  VERVAQQLGIPYYAVN--FEKQYWDKVFTYFLEEYKAGRTPNPDVMC-NKEIKFKAFLNH 115

Query: 123 AYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKK 177
           A  LG   +  G          + R                 L  +    V  PL  L+K
Sbjct: 116 AISLGADYVATGHYAQLQELDGEYRLIKGADANKDQTYFLNALSQKQLSKVMFPLGHLQK 175

Query: 178 YETWK 182
            E  K
Sbjct: 176 AEVRK 180


>gi|27375633|ref|NP_767162.1| argininosuccinate synthase [Bradyrhizobium japonicum USDA 110]
 gi|30172779|sp|P59607|ASSY_BRAJA RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|27348770|dbj|BAC45787.1| argininosuccinate synthase [Bradyrhizobium japonicum USDA 110]
          Length = 445

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 27/72 (37%), Gaps = 3/72 (4%)

Query: 1  MNDIIK---KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I+K   K     + FSGG D+S  L W   +  R    + + GQ ++ +        
Sbjct: 1  MTTILKSLPKGEKVGIAFSGGLDTSAALLWMKQKGARCYAYTANLGQPDEADYNEIPRKA 60

Query: 58 KKIVELMPKWKD 69
          ++         D
Sbjct: 61 QEFGAEKAVLVD 72


>gi|325266287|ref|ZP_08132966.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Kingella denitrificans ATCC 33394]
 gi|324982249|gb|EGC17882.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Kingella denitrificans ATCC 33394]
          Length = 389

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 47/191 (24%), Gaps = 10/191 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K  + ++  SGG DSS   +        V  +     + +  +  C +       + +
Sbjct: 27  MYKNQNIVVGLSGGVDSSVTAALLKRGGANVRGVFMQNWEDDDSDEYCSIKQ-----DSL 81

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                +      + +          +      + Q    PN  V     I        A 
Sbjct: 82  DAMAVADIVGIDIDIVNFAAQYKDKVFAYFLQEYQAGRTPNPDVLCNAEIKFKCFLDYAV 141

Query: 125 RLGITNIVIGVCETD-----YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
             G   I  G                              L          PL  L+K E
Sbjct: 142 AEGAEAIATGHYARKEVRDGVHYLLRGADGNKDQSYFLYRLQPYQLQKALFPLGHLEKPE 201

Query: 180 TWKLAQDIGGQ 190
             +LA + G  
Sbjct: 202 VRRLAVEFGLP 212


>gi|168705515|ref|ZP_02737792.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Gemmata obscuriglobus UQM 2246]
          Length = 514

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 55/187 (29%), Gaps = 17/187 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS C +  +     +V  +  D G   + E E        +V+   +
Sbjct: 216 NKRVICGLSGGVDSSVCAALLVKAIGPQVACIYVDNGLMREGETE--------LVKHTFR 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                    +      G+   ++L      + +   +   F+                  
Sbjct: 268 DWFKADLHAV----DAGERFLTALAGVTDPQQKRKIIGKVFIDVFKEEAKSIPDAHFLAQ 323

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G           +  G PD    TI+       L  E    +  PL  L K E   L  +
Sbjct: 324 GTLY----PDVIESGGSPDGPAATIKLHHNVGGLPAELGFELIEPLRDLFKDEVRHLGTE 379

Query: 187 IGGQDLV 193
           +G  + V
Sbjct: 380 LGLPEDV 386


>gi|167945139|ref|ZP_02532213.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 145

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 37/135 (27%), Gaps = 4/135 (2%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +       ++  SGG DSS      L++  +VE L     + +  +  C       + + 
Sbjct: 1   MNHPREKIIVGMSGGVDSSVAALLLLEQGYQVEGLFMKNWEEDDTKEYCS--AATDLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      H +  +   D         +             +  R I F  F     
Sbjct: 59  SSVADQLGIPLHSVNFS--ADYWERVFAYFLDEYRAGRTPNPDVLCNREIKFKAFLDYAL 116

Query: 124 YRLGITNIVIGVCET 138
             LG + I  G    
Sbjct: 117 STLGASRIATGHYAR 131


>gi|71021577|ref|XP_761019.1| hypothetical protein UM04872.1 [Ustilago maydis 521]
 gi|46100939|gb|EAK86172.1| hypothetical protein UM04872.1 [Ustilago maydis 521]
          Length = 426

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
          +  +    LL +SGG D+ST L+W +D    V     D GQ  + + E       K    
Sbjct: 1  MPGQTGKVLLAYSGGLDTSTILAWLIDEGYDVIAFMADVGQ--EEDFEAARSKALKCGAK 58

Query: 64 MPKWKD 69
               D
Sbjct: 59 DFILAD 64


>gi|319790619|ref|YP_004152252.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermovibrio ammonificans HB-1]
 gi|317115121|gb|ADU97611.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermovibrio ammonificans HB-1]
          Length = 357

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 56/187 (29%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              LL FSGG DS       L++   V  + F      K+  +      ++  EL+    
Sbjct: 15  KRVLLGFSGGVDSFYAAHLLLEQGFNVYPVYF------KLLPDADTTKPRRSAELLNL-- 66

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L +  L +    ++        +    PN        I L     LA +L I
Sbjct: 67  -------KLTVVDLTEEFKKAVIDYFIAYYRKGLTPNPCAVCNREIKLKELYKLARKLKI 119

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-------TVHTPLMWLKKYETW 181
             I  G            R    R +E          +        +  PL  L K E  
Sbjct: 120 PYIATGHYARVEKVESFGRKLIKRGVEPGKEQSYFLALVEQRVFENLILPLGNLTKREVI 179

Query: 182 KLAQDIG 188
           + A+ +G
Sbjct: 180 EKAKKLG 186


>gi|255019822|ref|ZP_05291898.1| Argininosuccinate synthase [Acidithiobacillus caldus ATCC 51756]
 gi|254970751|gb|EET28237.1| Argininosuccinate synthase [Acidithiobacillus caldus ATCC 51756]
          Length = 399

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 50/159 (31%), Gaps = 13/159 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE--- 62
                +L +SGG D+S  L W  D++   V T + D GQ  ++E        +++     
Sbjct: 1   MVKRVVLAYSGGLDTSVILKWLQDQYQCEVVTFTADIGQGEELEP--ARRKAEQLGAREV 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
            +   +     D++ P+         + T      +   ++    +  R +         
Sbjct: 59  FIDDLRQEFVRDYVFPM-------FRANTVYEGEYLLGTSIARPLIAKRMVEIAAEVGAD 111

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
           A   G T         +   Y       + A     +L 
Sbjct: 112 AVAHGATGKGNDQVRFEIGAYALNPDIRVIAPWREWDLN 150


>gi|205374227|ref|ZP_03227026.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus coahuilensis m4-4]
          Length = 371

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/194 (11%), Positives = 52/194 (26%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKK 59
           MN   K     ++  SGG DSS       ++   V  +   ++   ++  +       + 
Sbjct: 1   MNKAPKDT-RVVVGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVCTATEDYED 59

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           ++ +  +            +           T  +             +     I     
Sbjct: 60  VIRVANQIGIPYYA-----VNFEKQYWDKVFTYFLDEYKAGRTPNPDVMC-NKEIKFKAF 113

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA-----INLGMESHVTVHTPLMW 174
              A +LG   +  G          + +    +            L  +    V  P+  
Sbjct: 114 LDHAMKLGADYLATGHYAQVEERDGEIKMLRGKDENKDQTYFLNQLSQDVLKKVLFPIGS 173

Query: 175 LKKYETWKLAQDIG 188
           L K    ++A++ G
Sbjct: 174 LDKSRVREIAKEAG 187


>gi|146328716|ref|YP_001209536.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Dichelobacter nodosus VCS1703A]
 gi|205816915|sp|A5EVB4|MNMA_DICNV RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|146232186|gb|ABQ13164.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Dichelobacter nodosus VCS1703A]
          Length = 376

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 45/180 (25%), Gaps = 11/180 (6%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS        +   V  +     +       C     + + +     +      
Sbjct: 18  MSGGVDSSVTAYLLKKQGYDVFGIFMKNWEETFSSGYCS--AAEDLEDARDVCQTLDIPL 75

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
           H +         H  + +    + +    PN  V     I     A  A +LG   +  G
Sbjct: 76  HTVN---FVQQYHDRVFQLFLDEYRAGRTPNPDVLCNREIKFAELALYAQQLGADFLATG 132

Query: 135 VCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLKKYETWKLAQDIG 188
                                          +          PL  L+K +   +A++ G
Sbjct: 133 HYAQRLQSDNHEAALFKGVDAQKDQSYFLHQITPAQLNKAIFPLGGLQKKQVRAIARERG 192


>gi|71908644|ref|YP_286231.1| argininosuccinate synthase [Dechloromonas aromatica RCB]
 gi|119361268|sp|Q47BM0|ASSY_DECAR RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|71848265|gb|AAZ47761.1| argininosuccinate synthase [Dechloromonas aromatica RCB]
          Length = 468

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 47/157 (29%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  ++E        K +   
Sbjct: 1   MSDIKKVVLAYSGGLDTSVILKWLQDVYKCEVVTFTADLGQGEELEPARA----KALKAG 56

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +      + +     +         + T      +   ++    +  R I  +      A
Sbjct: 57  IKPKNIYIDDVREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIVNETGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         +   Y       + A     +L
Sbjct: 117 ICHGATGKGNDQVRFELGAYALKPGIKVIAPWREWDL 153


>gi|316964494|gb|EFV49574.1| GMP synthase (glutamine-hydrolyzing) [Trichinella spiralis]
          Length = 469

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 68/221 (30%), Gaps = 24/221 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKI---- 60
           K    L+L SGG DS+ C           +V  +  D G   K E    + + K +    
Sbjct: 241 KDKKVLILCSGGVDSTVCAVLLRKALGKSKVIPVFIDNGFLRKNEATEVVEMLKSLDFDV 300

Query: 61  ---------VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
                    V    K ++ +     +   +LG    + L +    +++   + +TF+   
Sbjct: 301 KCSYCLYSCVCPFNKSREFIHSTLPIHDKLLGAFEDAMLCRTCNPEMKRRIIGDTFMRMI 360

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA--INLGMESHVTVH 169
             I       +         +        S       DTI+       +   + +   + 
Sbjct: 361 KYIARQLKLNMKEVYLAQGTLRPDLIESASQLVSSHADTIKTHHNDTSLVRALRACGRII 420

Query: 170 TPLMWLKKYETWKLAQDIGGQDLVNL--ILE-----ESHTC 203
            PL    K E   LA+D+   D V             S TC
Sbjct: 421 EPLKDFHKDEVRALARDLNLPDYVITRHPFPGSHTYMSWTC 461


>gi|288927700|ref|ZP_06421547.1| GMP synthase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288330534|gb|EFC69118.1| GMP synthase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 514

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 58/187 (31%), Gaps = 21/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS C +       D++  +  D+G   K E        +K++E     
Sbjct: 214 DRVILGLSGGVDSSVCAALLNRAIGDKLTCIFVDHGMLRKNE-------FQKVMETYKGL 266

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             ++                S   +   +             GR+ + +  A        
Sbjct: 267 GLNVVGVDASDKFFADLKGVSDPEEKRKI------------IGRDFVEVFNAEAKKIT-D 313

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +  G    D           I++      L  E H+ +  PL WL K E  ++  ++
Sbjct: 314 AKWLAQGTIYPDRIESLSITGMVIKSHHNVGGLPKEMHLQLCEPLQWLFKDEVRRVGLEM 373

Query: 188 GGQDLVN 194
           G    + 
Sbjct: 374 GMPQRLI 380


>gi|84500752|ref|ZP_00999001.1| argininosuccinate synthase [Oceanicola batsensis HTCC2597]
 gi|84391705|gb|EAQ04037.1| argininosuccinate synthase [Oceanicola batsensis HTCC2597]
          Length = 407

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 44/157 (28%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W   +    V T + D GQ  ++E        + +   
Sbjct: 1   MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEP--ARKKAELLGIS 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +               +      + +   ++    +  R +         A
Sbjct: 59  PENI--YIEDIREEFTRDFVFPMFRANALYEGLYLLGTSIARPLISKRLVEIAEETGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         + S Y       + A     +L
Sbjct: 117 VAHGATGKGNDQVRFELSAYALNPEIKVIAPWREWDL 153


>gi|303232366|ref|ZP_07319059.1| thiamine biosynthesis/tRNA modification protein ThiI [Atopobium
           vaginae PB189-T1-4]
 gi|302481550|gb|EFL44617.1| thiamine biosynthesis/tRNA modification protein ThiI [Atopobium
           vaginae PB189-T1-4]
          Length = 437

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 52/190 (27%), Gaps = 25/190 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +++ S G DS         R      + F       +  +    + + I+  +  +  
Sbjct: 208 KVMVMLSSGFDSPVACWQVGRRGAICVPIHF---SGRPMVADTSEYLTQDIIRALEPYG- 263

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                            +      V  +I      +  +     I    A  +A+  G  
Sbjct: 264 ------------CVGRLYVCPMGEVQREISLVVPQSLRIICYRRIMFAVAERIAHIEGAK 311

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G      +          + ++    +     + V  PL+   K E    AQ IG 
Sbjct: 312 ALVTGESLGQVAS---------QTLDNIAVVNEMVTLPVFRPLIGSDKQEIIAQAQRIGT 362

Query: 190 QDLVNLILEE 199
            D+      +
Sbjct: 363 FDVSCQPTPD 372


>gi|323340536|ref|ZP_08080791.1| argininosuccinate synthase [Lactobacillus ruminis ATCC 25644]
 gi|323092080|gb|EFZ34697.1| argininosuccinate synthase [Lactobacillus ruminis ATCC 25644]
          Length = 402

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/174 (12%), Positives = 48/174 (27%), Gaps = 13/174 (7%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           ++ +    +L +SGG D+S  ++W  ++   V     D G+   +E   +  +       
Sbjct: 1   MVMEKEKVVLAYSGGLDTSVEIAWLKNKGYDVIACCIDVGEGKDLEEVKQKGLA------ 54

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  +G    + +    + +       +       N           + +     +A
Sbjct: 55  -------VGAVESIVIDAKKEFAEEYCLPALQGHAYYENKYPLVSALSRPLIVKHLVEVA 107

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
            + G T I  G                  A E  I   +          +   K
Sbjct: 108 KKYGATAIAHGCTGKGNDQVRFEVGIHALAPEMKIEDPIREVHWSREEEIDYAK 161


>gi|325684365|gb|EGD26534.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus delbrueckii subsp. lactis DSM 20072]
          Length = 375

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 49/192 (25%), Gaps = 12/192 (6%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           ++  +    ++  SGG DSS        +   V  +          +  C     +   +
Sbjct: 1   MVDNSKIRVVVGMSGGVDSSVSALLLKQQGYDVVGVFMKNWDDTNDDGVC--TATEDYED 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +           + +            + +    + +    PN  +     I        
Sbjct: 59  VKKVADKIGIPYYSIN---FEKEYWERVFQYFLKEYKAGRTPNPDIMCNTEIKFKSFLEY 115

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTI------RAIETAINLGMESHVTVHTPLMWLK 176
           A  L    + +G             H                 L  E    V  PL  L 
Sbjct: 116 ALDLDADYLAMGHYAKTMVDENGVTHMMRPKDGNKDQTYFLSQLTQEQIKRVMFPLQDLT 175

Query: 177 KYETWKLAQDIG 188
           K E  ++A++ G
Sbjct: 176 KPEVRRIAEEAG 187


>gi|300811318|ref|ZP_07091815.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300497682|gb|EFK32707.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 375

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 49/192 (25%), Gaps = 12/192 (6%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           ++  +    ++  SGG DSS        +   V  +          +  C     +   +
Sbjct: 1   MVDNSKIRVVVGMSGGVDSSVSALLLKQQGYDVVGVFMKNWDDTNDDGVC--TATEDYED 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +           + +            + +    + +    PN  +     I        
Sbjct: 59  VKKVADKIGIPYYSIN---FEKEYWERVFQYFLKEYKAGRTPNPDIMCNTEIKFKSFLEY 115

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTI------RAIETAINLGMESHVTVHTPLMWLK 176
           A  L    + +G             H                 L  E    V  PL  L 
Sbjct: 116 ALDLDADYLAMGHYAKTMVDENGVTHMMRPKDGNKDQTYFLSQLTQEQIKRVMFPLQDLT 175

Query: 177 KYETWKLAQDIG 188
           K E  ++A++ G
Sbjct: 176 KPEVRRIAEEAG 187


>gi|228917030|ref|ZP_04080590.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228842637|gb|EEM87725.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
          Length = 376

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 54/194 (27%), Gaps = 13/194 (6%)

Query: 3   DIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           D++ K P     ++  SGG DSS       ++   V  +             C     + 
Sbjct: 4   DMMNKLPHETRVVIGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVC--TATED 61

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
             +++          + +            +      + +    PN  V     I     
Sbjct: 62  YNDVIEVCNQIGIPYYAVN---FEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAF 118

Query: 120 ATLAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
              A  LG   +  G           Y   R       +T     L  E       PL  
Sbjct: 119 LEHAIALGADYVATGHYARVAYMDGEYKMLRGVDDNKDQTYFLNQLSQEQLSKTMFPLGE 178

Query: 175 LKKYETWKLAQDIG 188
           LKK +  ++A++ G
Sbjct: 179 LKKPQIREMAKEAG 192


>gi|162148152|ref|YP_001602613.1| tRNA-specific 2-thiouridylase MnmA [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|205816818|sp|A9HMI3|MNMA_GLUDA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|161786729|emb|CAP56312.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 361

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 35/135 (25%), Gaps = 3/135 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS   +  +     V   +       +   +   C  + I +       
Sbjct: 2   RIMVAMSGGVDSSVVAARLVAEGHEVVGATLQLYDSRESARKGACCAGRDIHDARRVADR 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                +++           S+ +  A        P   V     +       +A  LG  
Sbjct: 62  LGIPHYVID---AETRFRQSVIETFADAYAGGETPVPCVACNQGVKFTDLLGIARDLGAE 118

Query: 130 NIVIGVCETDYSGYP 144
            +  G       G  
Sbjct: 119 AMATGHYVRRIEGPD 133


>gi|221210354|ref|ZP_03583334.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
 gi|221169310|gb|EEE01777.1| conserved hypothetical protein [Burkholderia multivorans CGD1]
          Length = 468

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 57/220 (25%), Gaps = 20/220 (9%)

Query: 13  LLFSGGQDSS--TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           + FS G DS     L         V  +  D           R         L  +  + 
Sbjct: 151 VPFSHGLDSYGQVRLWQREHPDTEVVCVFAD----------ARTSGVDHGNGLKRRTSEH 200

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           +     + + +       +     +       L            ++        +G + 
Sbjct: 201 IQY---VRVPVSVKPMRRAEPSFRSRPFMFYLLAGLGAIESGANKVMIPENGQGSIGGSL 257

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S YP         +   +       V  + P ++  K    +   D G  
Sbjct: 258 IVTGHEAKHRSCYPGFTT----KLSRFVEALTGKRVKFYHPALFETKGAVLRALADAGEN 313

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
               L    S +C   +   R E  + C  C  C LR+  
Sbjct: 314 VRAVLGRHRSCSC-DARLTSRDEQMFHCGVCGNCLLRRTA 352


>gi|189485394|ref|YP_001956335.1| GMP synthase [uncultured Termite group 1 bacterium phylotype
           Rs-D17]
 gi|170287353|dbj|BAG13874.1| GMP synthase [uncultured Termite group 1 bacterium phylotype
           Rs-D17]
          Length = 509

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 58/188 (30%), Gaps = 18/188 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS            ++  +  D+G +   E E    VRK    +  K
Sbjct: 212 KSKVLCALSGGVDSSVAAVMLYKAIGKQLICVYVDHGLQKLGETE---RVRKVFGRMFGK 268

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +     + L+ L  I+     + +                + I FL+     +  +
Sbjct: 269 -NLIIVSAKKIFLSKLKGITDPEQKRKIIGHTFIEVFDGEVKKLKGINFLLQGTIYSDVI 327

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
              +I                   I++      L  +  + +  PL +L K E   L ++
Sbjct: 328 ESVSI-------------KGAKSPIKSHHNVGGLPEKMKMKLVEPLRFLFKDEVRVLGKE 374

Query: 187 IGGQDLVN 194
           +G    + 
Sbjct: 375 LGVPSEII 382


>gi|71892020|ref|YP_277750.1| thiamine biosynthesis protein ThiI [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|123641073|sp|Q493G5|THII_BLOPB RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|71796126|gb|AAZ40877.1| sulfur transfer protein [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
          Length = 486

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 59/184 (32%), Gaps = 27/184 (14%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKWKDS 70
           L L SGG DS+      + R  +V    F+ G   + VE          +  ++    + 
Sbjct: 182 LSLISGGFDSAVASYMLIRRGCKVNYCFFNLGGDMHTVE----------VCRVIYFLWNK 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
               H +    +           V  +I      N        + +  A+ +A R  IT 
Sbjct: 232 FSSSHKIKFISI-------DFSEVIKEITAKIKDNQIGVVLKRMMIRSASLVANRYKITA 284

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           ++ G      S         I ++         S   +  PL+   K +   LA+ IG +
Sbjct: 285 LITGEVLGQVSSQTLSNLTLIDSV---------SDHVIFRPLIAYDKEKIIDLARKIGTE 335

Query: 191 DLVN 194
            L  
Sbjct: 336 ILSK 339


>gi|281491325|ref|YP_003353305.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactococcus lactis subsp. lactis KF147]
 gi|14195271|sp|Q9CHA1|MNMA_LACLA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|281375066|gb|ADA64584.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactococcus lactis subsp. lactis KF147]
          Length = 376

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 49/194 (25%), Gaps = 11/194 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+         ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSGKSPAQTRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDENGVC--TATEDY 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 59  KDVAAVADQIGVPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 115

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMW 174
             A  LG   +  G      +      H    A          S +          PL  
Sbjct: 116 DYAMELGADYVATGHYAQVRTDENGIVHMLRGADNNKDQTYFLSQLTQEQLKKTMFPLGH 175

Query: 175 LKKYETWKLAQDIG 188
           L+K E  K+A+  G
Sbjct: 176 LEKPEVRKIAEKAG 189


>gi|303243667|ref|ZP_07330008.1| Queuosine synthesis-like protein [Methanothermococcus okinawensis
          IH1]
 gi|302485909|gb|EFL48832.1| Queuosine synthesis-like protein [Methanothermococcus okinawensis
          IH1]
          Length = 292

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 1/55 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRV-ETLSFDYGQRNKVELECRLCVRKKI 60
          K    + + SGG+DSST L  A D    V   + F +     +  E    +  K+
Sbjct: 37 KDKKIVSMLSGGKDSSTALHIAKDLGLDVCLCVHFVHKWSWNLAKEQAKKIADKL 91


>gi|293364413|ref|ZP_06611139.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus oralis ATCC 35037]
 gi|291317259|gb|EFE57686.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus oralis ATCC 35037]
          Length = 415

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 51/194 (26%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 43  MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 98

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 99  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 155

Query: 121 TLAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   I  G                R       +T     L  E       PL  
Sbjct: 156 DYAMTLGADYIATGHYARVARDEDGIVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 215

Query: 175 LKKYETWKLAQDIG 188
           L+K E  KLA++ G
Sbjct: 216 LEKPEVRKLAEEAG 229


>gi|218961201|ref|YP_001740976.1| putative tRNA
          (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          / fibronectin/fibrinogen-binding protein [Candidatus
          Cloacamonas acidaminovorans]
 gi|167729858|emb|CAO80770.1| putative tRNA
          (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          / fibronectin/fibrinogen-binding protein [Candidatus
          Cloacamonas acidaminovorans]
          Length = 331

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 27/79 (34%), Gaps = 4/79 (5%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          +K    A+ LFSGG DS   + W   +   V  + F       +  E  +    K    +
Sbjct: 1  MKTH-KAIALFSGGLDSILAVKWMQSKGYAVHPVFFK---APYLLPERAINYAAKNAIDL 56

Query: 65 PKWKDSLGEDHILPLAILG 83
               S     +L   + G
Sbjct: 57 EVIDVSEEHIKLLNNPVYG 75


>gi|104773839|ref|YP_618819.1| tRNA-specific 2-thiouridylase MnmA [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC 11842]
 gi|123077302|sp|Q1GAS1|MNMA_LACDA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|103422920|emb|CAI97582.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
          Length = 375

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 49/192 (25%), Gaps = 12/192 (6%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           ++  +    ++  SGG DSS        +   V  +          +  C     +   +
Sbjct: 1   MVDNSKIRVVVGMSGGVDSSVSALLLKQQGYDVVGVFMKNWDDTNDDGVC--TATEDYED 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +           + +            + +    + +    PN  +     +        
Sbjct: 59  VKKVADKIGIPYYSIN---FEKEYWERVFQYFLKEYKAGRTPNPDIMCNTEVKFKSFLEY 115

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTI------RAIETAINLGMESHVTVHTPLMWLK 176
           A  L    + +G             H                 L  E    V  PL  L 
Sbjct: 116 ALDLDADYLAMGHYAKTMVDENGVTHMMRPKDGNKDQTYFLSQLTQEQIKRVMFPLQDLT 175

Query: 177 KYETWKLAQDIG 188
           K E  ++A++ G
Sbjct: 176 KPEVRRIAEEAG 187


>gi|116513846|ref|YP_812752.1| tRNA-specific 2-thiouridylase MnmA [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC BAA-365]
 gi|122275384|sp|Q04B58|MNMA_LACDB RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|116093161|gb|ABJ58314.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
 gi|325125503|gb|ADY84833.1| Probable tRNA-methyltransferase [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 375

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 49/192 (25%), Gaps = 12/192 (6%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           ++  +    ++  SGG DSS        +   V  +          +  C     +   +
Sbjct: 1   MVDNSKIRVVVGMSGGVDSSVSALLLKQQGYDVVGVFMKNWDDTNDDGVC--TATEDYED 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +           + +            + +    + +    PN  +     +        
Sbjct: 59  VKKVADKIGIPYYSIN---FEKEYWERVFQYFLKEYKAGRTPNPDIMCNTEVKFKSFLEY 115

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTI------RAIETAINLGMESHVTVHTPLMWLK 176
           A  L    + +G             H                 L  E    V  PL  L 
Sbjct: 116 ALDLDADYLAMGHYAKTMVDENGVTHMMRPKDGNKDQTYFLSQLTQEQIKRVMFPLQDLT 175

Query: 177 KYETWKLAQDIG 188
           K E  ++A++ G
Sbjct: 176 KPEVRRIAEEAG 187


>gi|47566584|ref|ZP_00237406.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus G9241]
 gi|49481478|ref|YP_038446.1| tRNA-specific 2-thiouridylase MnmA [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|52141111|ref|YP_085718.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus E33L]
 gi|222097839|ref|YP_002531896.1| tRNA-specific 2-thiouridylase mnma [Bacillus cereus Q1]
 gi|254724677|ref|ZP_05186460.1| tRNA-specific 2-thiouridylase MnmA [Bacillus anthracis str. A1055]
 gi|300119218|ref|ZP_07056915.1| tRNA-specific 2-thiouridylase MnmA [Bacillus cereus SJ1]
 gi|301055904|ref|YP_003794115.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus anthracis CI]
 gi|71658010|sp|Q634E9|MNMA_BACCZ RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|73919896|sp|Q6HDD0|MNMA_BACHK RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205814924|sp|A0RJ05|MNMA_BACAH RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|254811444|sp|B9IYG1|MNMA_BACCQ RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|47556614|gb|EAL14946.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus G9241]
 gi|49333034|gb|AAT63680.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis serovar konkukian str. 97-27]
 gi|51974580|gb|AAU16130.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus E33L]
 gi|221241897|gb|ACM14607.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus Q1]
 gi|298723438|gb|EFI64183.1| tRNA-specific 2-thiouridylase MnmA [Bacillus cereus SJ1]
 gi|300378073|gb|ADK06977.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus biovar anthracis str. CI]
          Length = 371

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 53/193 (27%), Gaps = 11/193 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN +  +    ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MNKLPHET-RVVIGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            +      + +    PN  V     I      
Sbjct: 58  NDVIEVCNQIGIPYYAVN---FEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWL 175
             A  LG   +  G           Y   R       +T     L  E       PL  L
Sbjct: 115 EHAIALGADYVATGHYARVAYMDGEYKMLRGVDDNKDQTYFLNQLSQEQLSKTMFPLGEL 174

Query: 176 KKYETWKLAQDIG 188
           KK +  ++A++ G
Sbjct: 175 KKPQIREMAKEAG 187


>gi|288818608|ref|YP_003432956.1| thiamine biosynthesis protein [Hydrogenobacter thermophilus TK-6]
 gi|288788008|dbj|BAI69755.1| thiamine biosynthesis protein [Hydrogenobacter thermophilus TK-6]
 gi|308752199|gb|ADO45682.1| Queuosine synthesis [Hydrogenobacter thermophilus TK-6]
          Length = 347

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 5/79 (6%)

Query: 7  KAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ----RNKVELECRLCVRKKIV 61
           +   A+ L SGG DSS  +    D+   ++ L F  G       +     R   ++ + 
Sbjct: 1  MSKVRAVALLSGGLDSSLAVHLLKDQGVEIKALYFYTGFCITEHKRRLGLKREDGQQYVN 60

Query: 62 ELMPKWKDSLGEDHILPLA 80
                        ++ ++
Sbjct: 61 PAFRAAAQLKVPIEVVDVS 79


>gi|288926453|ref|ZP_06420373.1| GMP synthase, C- domain protein [Prevotella buccae D17]
 gi|288336744|gb|EFC75110.1| GMP synthase, C- domain protein [Prevotella buccae D17]
          Length = 331

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 60/188 (31%), Gaps = 21/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS C +         +  +  D+G   K E        KK++E    
Sbjct: 30  NDRVILGLSGGVDSSVCATLLNKAIGKNLTCIFVDHGMLRKNE-------FKKVMEAYEG 82

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              ++                +S      ++   +      + GR+ + +  A       
Sbjct: 83  LGLNVV------------GVDASDKFFKDLEGVTDPEKKRKIIGRDFVEVFNAEAKKIT- 129

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G    D           I++      L  E H+ +  PL WL K E  ++  +
Sbjct: 130 DAKWLAQGTIYPDRIESLSITGMVIKSHHNVGGLPKEMHLQLCEPLQWLFKDEVRRVGYE 189

Query: 187 IGGQDLVN 194
           +G  + + 
Sbjct: 190 LGMPERLI 197


>gi|229032046|ref|ZP_04188029.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus AH1271]
 gi|228729291|gb|EEL80285.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus AH1271]
          Length = 376

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 53/194 (27%), Gaps = 13/194 (6%)

Query: 3   DIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           D++ K P     ++  SGG DSS       ++   V  +             C     + 
Sbjct: 4   DMMNKLPQETRVVIGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVC--TATED 61

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
             +++          + +            +      + +    PN  V     I     
Sbjct: 62  YNDVIEVCNQIGIPYYAVN---FEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAF 118

Query: 120 ATLAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
              A  LG   +  G           Y   R       +T     L  E       PL  
Sbjct: 119 LEHAIALGADYVATGHYARVAYMDGEYKMLRGVDDNKDQTYFLNQLSQEQLSKTMFPLGE 178

Query: 175 LKKYETWKLAQDIG 188
           LKK +  ++A + G
Sbjct: 179 LKKPQIREMATEAG 192


>gi|229175070|ref|ZP_04302588.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus MM3]
 gi|228608438|gb|EEK65742.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus MM3]
          Length = 376

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 53/194 (27%), Gaps = 13/194 (6%)

Query: 3   DIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           D++ K P     ++  SGG DSS       ++   V  +             C     + 
Sbjct: 4   DMMNKLPQETRVVIGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVC--TATED 61

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
             +++          + +            +      + +    PN  V     I     
Sbjct: 62  YNDVIEVCNQIGIPYYAVN---FEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAF 118

Query: 120 ATLAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
              A  LG   +  G           Y   R       +T     L  E       PL  
Sbjct: 119 LEHAIALGADYVATGHYARVAYMDGEYKMLRGVDDNKDQTYFLNQLSQEQLSKTMFPLGE 178

Query: 175 LKKYETWKLAQDIG 188
           LKK +  ++A + G
Sbjct: 179 LKKPQIREMATEAG 192


>gi|332706057|ref|ZP_08426129.1| glutamine-hydrolyzing GMP synthase [Lyngbya majuscula 3L]
 gi|332355149|gb|EGJ34617.1| glutamine-hydrolyzing GMP synthase [Lyngbya majuscula 3L]
          Length = 547

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 52/191 (27%), Gaps = 19/191 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSST          D++  +  D G   K E E              +
Sbjct: 243 EKRVLLALSGGVDSSTLAFLLHRAIGDKLTCMFIDQGFMRKGEPE--------------Q 288

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 E+  + +  +                ++          R              L
Sbjct: 289 LVKLFQEEFCIRVEYVNARDRFLARLAGVTDPEEKRRHIGHEFIRVFEEESQRLGPFDYL 348

Query: 127 GITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
               +   V E+ ++       +     I++      L       +  PL  L K E  +
Sbjct: 349 AQGTLYPDVIESAHTNVDPKTGERVAVKIKSHHNVGGLPKNLRFKLVEPLRKLFKDEVRQ 408

Query: 183 LAQDIGGQDLV 193
           L +D+   + +
Sbjct: 409 LGRDLHLPESI 419


>gi|302536332|ref|ZP_07288674.1| GMP synthase [Streptomyces sp. C]
 gi|302445227|gb|EFL17043.1| GMP synthase [Streptomyces sp. C]
          Length = 530

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 57/186 (30%), Gaps = 14/186 (7%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             A+   SGG DS+   +        ++  +  D+G   K E E          ++   +
Sbjct: 229 KRAICGLSGGVDSAVAAALVQKAIGSQLTCVYVDHGLMRKGETE----------QVEKDF 278

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             + G    +  A    ++  +   +   K +        V  +  + ++     A    
Sbjct: 279 VAATGVQLKVVDAQERFLTALAGVSDPETKRKIIGREFIRVFEQAQLEILQEDGPAV--- 335

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   +               I++      L  +    +  PL  L K E   + Q++
Sbjct: 336 AFLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPDDIEFELVEPLRQLFKDEVRMVGQEL 395

Query: 188 GGQDLV 193
           G  + +
Sbjct: 396 GLPEEI 401


>gi|296127467|ref|YP_003634719.1| thiamine biosynthesis protein [Brachyspira murdochii DSM 12563]
 gi|296019283|gb|ADG72520.1| thiamine biosynthesis protein [Brachyspira murdochii DSM 12563]
          Length = 352

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 16/39 (41%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          + K   A+LL SGG DS    +        V  L F  G
Sbjct: 1  MNKKAKAILLLSGGLDSMLVGAILKRENIDVLALRFVTG 39


>gi|218899565|ref|YP_002447976.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus G9842]
 gi|218543622|gb|ACK96016.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus G9842]
          Length = 372

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 53/193 (27%), Gaps = 11/193 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN +  +    ++  SGG DSS       ++   V  +             C     +  
Sbjct: 2   MNKLPHET-RVVIGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            +      + +    PN  V     I      
Sbjct: 59  NDVIEVCNQIGIPYYAVN---FEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAFL 115

Query: 121 TLAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWL 175
             A  LG   +  G           Y   R       +T     L  E       PL  L
Sbjct: 116 EHAIALGADYVATGHYARVAYMDGEYKMLRGVDDNKDQTYFLNQLSQEQLSKTMFPLGEL 175

Query: 176 KKYETWKLAQDIG 188
           KK +  ++A++ G
Sbjct: 176 KKPQIREMAKEAG 188


>gi|30022472|ref|NP_834103.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus ATCC 14579]
 gi|206969454|ref|ZP_03230408.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus AH1134]
 gi|296504889|ref|YP_003666589.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis BMB171]
 gi|29898030|gb|AAP11304.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
           [Bacillus cereus ATCC 14579]
 gi|206735142|gb|EDZ52310.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus AH1134]
 gi|296325941|gb|ADH08869.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis BMB171]
 gi|326942178|gb|AEA18074.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus thuringiensis serovar chinensis CT-43]
          Length = 372

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 53/193 (27%), Gaps = 11/193 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN +  +    ++  SGG DSS       ++   V  +             C     +  
Sbjct: 2   MNKLPHET-RVVIGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            +      + +    PN  V     I      
Sbjct: 59  NDVIEVCNQIGIPYYAVN---FEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAFL 115

Query: 121 TLAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWL 175
             A  LG   +  G           Y   R       +T     L  E       PL  L
Sbjct: 116 EHAIALGADYVATGHYARVAYMDGEYKMLRGVDDNKDQTYFLNQLSQEQLSKTMFPLGEL 175

Query: 176 KKYETWKLAQDIG 188
           KK +  ++A++ G
Sbjct: 176 KKPQIREMAKEAG 188


>gi|16082525|ref|NP_393982.1| thiamine biosynthesis protein ThiI [Thermoplasma acidophilum DSM
           1728]
 gi|22002001|sp|Q9HKT9|THII_THEAC RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
          Length = 481

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 60/186 (32%), Gaps = 29/186 (15%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             + L SGG DS       + R     +   S  Y     V+L   + V KK+VE    +
Sbjct: 170 KYISLVSGGIDSPVSTWMIMKRGSPCDILFCSLSY----PVDLRPFVDVVKKLVERWAPY 225

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +        + +A    +  +       M I+     +     R I  +     +A   G
Sbjct: 226 RKP-----RIYVADCRSLIRT-------MVIEGRTKYSNVTFKRVIYRIA--EKIALENG 271

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              IV G      S          +  E    +     V +  PL+ + K E   +A+ I
Sbjct: 272 YNGIVTGESLGQVSS---------QTAENLKAIESGIGVPILRPLIGMDKDEVVDMARRI 322

Query: 188 GGQDLV 193
           G    +
Sbjct: 323 GTFPEL 328


>gi|295399328|ref|ZP_06809310.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Geobacillus thermoglucosidasius C56-YS93]
 gi|294978794|gb|EFG54390.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Geobacillus thermoglucosidasius C56-YS93]
          Length = 371

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 52/193 (26%), Gaps = 15/193 (7%)

Query: 5   IKKAPS---ALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKI 60
           + K P     ++  SGG DSS        +   V  +   ++   ++  +       + +
Sbjct: 1   MNKPPKDTRVVVGMSGGVDSSVAALLLKQQGYDVIGIFMKNWDDTDENGVCTATEDYEDV 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           V +  +            +           T  +             +     I      
Sbjct: 61  VRVCNQIGIPYYA-----VNFEKQYWDKVFTYFLDEYKAGRTPNPDVMC-NKEIKFKAFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  +G   +  G          + +                 LG E    V  PL  L
Sbjct: 115 EHALSIGADYVATGHYARIEYRDGEYKLLRGVDQKKDQTYFLNQLGQEQLSKVMFPLGHL 174

Query: 176 KKYETWKLAQDIG 188
           +K +  ++A+D G
Sbjct: 175 EKAQVRQIAKDAG 187


>gi|262306097|gb|ACY45641.1| gln amidotransferase [Pedetontus saltator]
          Length = 198

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 21/62 (33%), Gaps = 2/62 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               LLL SGG DS+ C +          V  +  D G   K E +       K+   + 
Sbjct: 43  NSKVLLLVSGGVDSTVCGALLHKALPEDQVIAVHIDNGYMRKHESQKVEQSLAKVGLRLR 102

Query: 66  KW 67
             
Sbjct: 103 VI 104


>gi|260892095|ref|YP_003238192.1| PP-loop domain protein [Ammonifex degensii KC4]
 gi|260864236|gb|ACX51342.1| PP-loop domain protein [Ammonifex degensii KC4]
          Length = 307

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/187 (11%), Positives = 47/187 (25%), Gaps = 12/187 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
             ++      ++  SGG+DS             V     D G              +   
Sbjct: 41  YRMLPPGARVVVALSGGKDSLVTAFVLKRLGYEVLGFFVDLGIEENNFSLDSRRAVEDFC 100

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                       +  +PL +         T     + Q+       V  R+++     A 
Sbjct: 101 R-----------EKEIPLEVFSLKEKFGKTIPEVARRQERICALCGVTKRHLMNEYALAV 149

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            AY L   + +  +  +  +         +      +         +    +  +K E  
Sbjct: 150 NAYALATGHTLDDMAASLLANLTRWDLHYLAKGLPVLPPEPGFARKIKPLALQGEK-EIL 208

Query: 182 KLAQDIG 188
             A+  G
Sbjct: 209 AFAELHG 215


>gi|312110111|ref|YP_003988427.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Geobacillus sp. Y4.1MC1]
 gi|311215212|gb|ADP73816.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Geobacillus sp. Y4.1MC1]
          Length = 371

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 52/193 (26%), Gaps = 15/193 (7%)

Query: 5   IKKAPS---ALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKI 60
           + K P     ++  SGG DSS        +   V  +   ++   ++  +       + +
Sbjct: 1   MNKPPKDTRVVVGMSGGVDSSVAALLLKQQGYDVIGIFMKNWDDTDENGVCTATEDYEDV 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           V +  +            +           T  +             +     I      
Sbjct: 61  VRVCNQIGIPYYA-----VNFEKQYWDKVFTYFLDEYKAGRTPNPDVMC-NKEIKFKAFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  +G   +  G          + +                 LG E    V  PL  L
Sbjct: 115 EHALSIGADYVATGHYARIEYRDGEYKLLRGVDQKKDQTYFLNQLGQEQLSKVMFPLGHL 174

Query: 176 KKYETWKLAQDIG 188
           +K +  ++A+D G
Sbjct: 175 EKAQVRQIAKDAG 187


>gi|257065999|ref|YP_003152255.1| argininosuccinate synthase [Anaerococcus prevotii DSM 20548]
 gi|256797879|gb|ACV28534.1| argininosuccinate synthase [Anaerococcus prevotii DSM 20548]
          Length = 410

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQ 44
          I+K+A   +L +SGG D+S   +W L++    V  +S D GQ
Sbjct: 8  ILKEAKKVILAYSGGLDTSVLTTWLLEKGVGEVVCVSVDLGQ 49


>gi|153953103|ref|YP_001393868.1| GMP synthase [Clostridium kluyveri DSM 555]
 gi|219853754|ref|YP_002470876.1| hypothetical protein CKR_0411 [Clostridium kluyveri NBRC 12016]
 gi|226738426|sp|A5N5D9|GUAA_CLOK5 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|254800093|sp|B9DYY7|GUAA_CLOK1 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|146345984|gb|EDK32520.1| GuaA [Clostridium kluyveri DSM 555]
 gi|219567478|dbj|BAH05462.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 510

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 57/187 (30%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS            ++  +  D+G   K E +    + KK        
Sbjct: 216 KKVICAMSGGVDSSVAAMIVHKAVGKQLTCIFVDHGLLRKDEGDQVEDIFKK-------- 267

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                           +    +  K    K++D + P          F+      A +LG
Sbjct: 268 ------------QFNMNFIRVNAEKRFLQKLKDISDPEKKRKIIGEEFIRVFEEEAKKLG 315

Query: 128 -ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  +V G    D          TI++      L  +    +  PL  L K E   + ++
Sbjct: 316 EIAFLVQGTIYPDVVESGLGTSATIKSHHNVGGLPEDMDFKLIEPLRELFKDEVRAVGEE 375

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 376 LGIPHKL 382


>gi|330965599|gb|EGH65859.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 366

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 48/185 (25%), Gaps = 10/185 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS      +++  +VE L     + +     C    R+ + +      
Sbjct: 2   KRVIVGMSGGVDSSVSAVLLMEQGYQVEGLFMKNWEEDDGTEYC--TAREDLADAQAVCD 59

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + H        +   +     +             +  R  I        A  LG 
Sbjct: 60  KIGIKLHT--ANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFKAFLDYALMLGA 116

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             I  G                              +G E       P+  L+K E   +
Sbjct: 117 DLIATGHYVRRRDIDGRTELLKGLDPNKDQSYFLHAVGGEQIARTLFPVGELEKPEVRAI 176

Query: 184 AQDIG 188
           A+  G
Sbjct: 177 AEKHG 181


>gi|330972900|gb|EGH72966.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 366

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 48/185 (25%), Gaps = 10/185 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS      +++  +VE L     + +     C    R+ + +      
Sbjct: 2   KRVIVGMSGGVDSSVSAVLLMEQGYQVEGLFMKNWEEDDGTEYC--TAREDLADAQAVCD 59

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + H        +   +     +             +  R  I        A  LG 
Sbjct: 60  KIGIKLHT--ANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFKAFLDYALMLGA 116

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             I  G                              +G E       P+  L+K E   +
Sbjct: 117 DLIATGHYVRRRDIDGRTELLKGLDPNKDQSYFLHAVGGEQIARTLFPVGELEKPEVRAI 176

Query: 184 AQDIG 188
           A+  G
Sbjct: 177 AEKHG 181


>gi|330940375|gb|EGH43479.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 366

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 48/185 (25%), Gaps = 10/185 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS      +++  +VE L     + +     C    R+ + +      
Sbjct: 2   KRVIVGMSGGVDSSVSAVLLMEQGYQVEGLFMKNWEEDDGTEYC--TAREDLADAQAVCD 59

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + H        +   +     +             +  R  I        A  LG 
Sbjct: 60  KIGIKLHT--ANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFKAFLDYALMLGA 116

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             I  G                              +G E       P+  L+K E   +
Sbjct: 117 DLIATGHYVRRRDIDGRTELLKGLDPNKDQSYFLHAVGGEQIARTLFPVGELEKPEVRAI 176

Query: 184 AQDIG 188
           A+  G
Sbjct: 177 AEKHG 181


>gi|330889667|gb|EGH22328.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 366

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 48/185 (25%), Gaps = 10/185 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS      +++  +VE L     + +     C    R+ + +      
Sbjct: 2   KRVIVGMSGGVDSSVSAVLLMEQGYQVEGLFMKNWEEDDGTEYC--TAREDLADAQAVCD 59

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + H        +   +     +             +  R  I        A  LG 
Sbjct: 60  KIGIKLHT--ANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFKAFLDYALMLGA 116

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             I  G                              +G E       P+  L+K E   +
Sbjct: 117 DLIATGHYVRRRDIDGRTELLKGLDPNKDQSYFLHAVGGEQIARTLFPVGELEKPEVRAI 176

Query: 184 AQDIG 188
           A+  G
Sbjct: 177 AEKHG 181


>gi|302185016|ref|ZP_07261689.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas syringae pv.
           syringae 642]
 gi|330981378|gb|EGH79481.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 366

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 48/185 (25%), Gaps = 10/185 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS      +++  +VE L     + +     C    R+ + +      
Sbjct: 2   KRVIVGMSGGVDSSVSAVLLMEQGYQVEGLFMKNWEEDDGTEYC--TAREDLADAQAVCD 59

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + H        +   +     +             +  R  I        A  LG 
Sbjct: 60  KIGIKLHT--ANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFKAFLDYALMLGA 116

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             I  G                              +G E       P+  L+K E   +
Sbjct: 117 DLIATGHYVRRRDIDGRTELLKGLDPNKDQSYFLHAVGGEQIARTLFPVGELEKPEVRAI 176

Query: 184 AQDIG 188
           A+  G
Sbjct: 177 AEKHG 181


>gi|289625417|ref|ZP_06458371.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289649300|ref|ZP_06480643.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|330866846|gb|EGH01555.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas syringae pv.
           aesculi str. 0893_23]
          Length = 366

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 48/185 (25%), Gaps = 10/185 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS      +++  +VE L     + +     C    R+ + +      
Sbjct: 2   KRVIVGMSGGVDSSVSALLLMEQGYQVEGLFMKNWEEDDGTEYC--TAREDLADAQAVCD 59

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + H        +   +     +             +  R  I        A  LG 
Sbjct: 60  KIGIKLHT--ANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFKAFLDYALMLGA 116

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             I  G                              +G E       P+  L+K E   +
Sbjct: 117 DLIATGHYVRRRDTDGRTELLKGLDPNKDQSYFLHAVGGEQIARTLFPVGELEKPEVRAI 176

Query: 184 AQDIG 188
           A+  G
Sbjct: 177 AEKHG 181


>gi|149912904|ref|ZP_01901438.1| argininosuccinate synthase [Roseobacter sp. AzwK-3b]
 gi|149813310|gb|EDM73136.1| argininosuccinate synthase [Roseobacter sp. AzwK-3b]
          Length = 408

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/157 (12%), Positives = 43/157 (27%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W   +    V T + D GQ  +++        + +   
Sbjct: 1   MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELDP--ARQKAEMLGIK 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                     +  +           +        +   ++    +  R +         A
Sbjct: 59  PENIFIEDVREEFV--RDFVFPMFRANAVYEGQYLLGTSIARPLISKRLVEIAEETGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         + + Y       + A     +L
Sbjct: 117 VAHGATGKGNDQVRFELAAYALNPDIKVIAPWREWDL 153


>gi|42783525|ref|NP_980772.1| tRNA-specific 2-thiouridylase MnmA [Bacillus cereus ATCC 10987]
 gi|73919894|sp|Q730D7|MNMA_BACC1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|42739454|gb|AAS43380.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus ATCC 10987]
          Length = 371

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 53/193 (27%), Gaps = 11/193 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN +  +    ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MNKLPHET-RVVIGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            +      + +    PN  V     I      
Sbjct: 58  NDVIEVCNQIGIPYYAVN---FEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWL 175
             A  LG   +  G           Y   R       +T     L  E       PL  L
Sbjct: 115 EHAIALGADYVATGHYARVAYMDGEYKMLRGVDDNKDQTYFLNQLSQEQLSKTMFPLGEL 174

Query: 176 KKYETWKLAQDIG 188
           KK +  ++A++ G
Sbjct: 175 KKPQIREMAKEAG 187


>gi|330875781|gb|EGH09930.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 366

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 48/185 (25%), Gaps = 10/185 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS      +++  +VE L     + +     C    R+ + +      
Sbjct: 2   KRVIVGMSGGVDSSVSAVLLMEQGYQVEGLFMKNWEEDDGTEYC--TAREDLADAQAVCD 59

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + H        +   +     +             +  R  I        A  LG 
Sbjct: 60  KIGIKLHT--ANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFKAFLDYALMLGA 116

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             I  G                              +G E       P+  L+K E   +
Sbjct: 117 DLIATGHYVRRRDIDGRTELLKGLDPNKDQSYFLHAVGGEQIARTLFPVGELEKPEVRAI 176

Query: 184 AQDIG 188
           A+  G
Sbjct: 177 AEKHG 181


>gi|157813138|gb|ABV81314.1| putative GMP synthetase [Mastigoproctus giganteus]
          Length = 196

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 2/63 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +      + D+V  +  D G   K E        K++   M   
Sbjct: 45  KVLMLVSGGVDSTVCAALLHKALKEDQVIAIHIDNGFMRKNESLQVEQSLKQLGLKMKVI 104

Query: 68  KDS 70
             S
Sbjct: 105 NAS 107


>gi|332828874|gb|EGK01557.1| hypothetical protein HMPREF9455_02089 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 399

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 43/172 (25%), Gaps = 12/172 (6%)

Query: 7   KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L FSGG D S      + D    V T   + G     EL+       K+  +  
Sbjct: 1   MKKKVVLAFSGGLDTSFCAKYLSADMGYDVYTAIANTGGFTPEELKVIEEKAYKLGAVKH 60

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                      + L I  +    S+   +   +  N      V    I   +     A  
Sbjct: 61  -----------VSLDITQEYYEKSIKYMIFGNVLRNGTYPISVSSERIFQAIAIINYAKE 109

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
           +G   +  G                + A    I       +      +   K
Sbjct: 110 IGADAVAHGSTGAGNDQVRFDLTFDVLAPGIEIITPTRDMILTREYEIDYLK 161


>gi|257485430|ref|ZP_05639471.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|330987933|gb|EGH86036.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 366

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 48/185 (25%), Gaps = 10/185 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS      +++  +VE L     + +     C    R+ + +      
Sbjct: 2   KRVIVGMSGGVDSSVSAVLLMEQGYQVEGLFMKNWEEDDGTEYC--TAREDLADAQAVCD 59

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + H        +   +     +             +  R  I        A  LG 
Sbjct: 60  KIGIKLHT--ANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFKAFLDYALMLGA 116

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             I  G                              +G E       P+  L+K E   +
Sbjct: 117 DLIATGHYVRRRDTDGRTELLKGLDPNKDQSYFLHAVGGEQIARTLFPVGELEKPEVRAI 176

Query: 184 AQDIG 188
           A+  G
Sbjct: 177 AEKHG 181


>gi|88658029|ref|YP_507487.1| argininosuccinate synthase [Ehrlichia chaffeensis str. Arkansas]
 gi|119361275|sp|Q2GGE6|ASSY_EHRCR RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|88599486|gb|ABD44955.1| argininosuccinate synthase [Ehrlichia chaffeensis str. Arkansas]
          Length = 393

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 62/200 (31%), Gaps = 15/200 (7%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM-PK 66
              +L +SGG D+S  L W  + +   V   + D GQ + +    +      + E+    
Sbjct: 2   KKIVLAYSGGLDTSVILKWLQENYNCEVVVFTADLGQNDDMSAIRQKAAASNVKEIFIED 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            K+   +D + P+         + T      +   ++    +  R I         A   
Sbjct: 62  LKEEFVKDFVFPM-------FRANTVYEGYYLLGTSIARPLIAKRQIEIAHLTGADAVAH 114

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G T         ++  Y    +  + A      L   + +      +   K     +  D
Sbjct: 115 GATGKGNDQIRFEFGYYSCDPNIKVIAPWRQWELTSRNSL------IEYAKKHGIDVPLD 168

Query: 187 IGGQDLVNLILEESHTCYLG 206
              +   ++     HT Y G
Sbjct: 169 KASEPPYSIDANLLHTSYEG 188


>gi|68172032|ref|ZP_00545321.1| Argininosuccinate synthase [Ehrlichia chaffeensis str. Sapulpa]
 gi|67998543|gb|EAM85308.1| Argininosuccinate synthase [Ehrlichia chaffeensis str. Sapulpa]
          Length = 387

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 62/200 (31%), Gaps = 15/200 (7%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM-PK 66
              +L +SGG D+S  L W  + +   V   + D GQ + +    +      + E+    
Sbjct: 2   KKIVLAYSGGLDTSVILKWLQENYNCEVVVFTADLGQNDDMSAIRQKAAASNVKEIFIED 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            K+   +D + P+         + T      +   ++    +  R I         A   
Sbjct: 62  LKEEFVKDFVFPM-------FRANTVYEGYYLLGTSIARPLIAKRQIEIAHLTGADAVAH 114

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G T         ++  Y    +  + A      L   + +      +   K     +  D
Sbjct: 115 GATGKGNDQIRFEFGYYSCDPNIKVIAPWRQWELTSRNSL------IEYAKKHGIDVPLD 168

Query: 187 IGGQDLVNLILEESHTCYLG 206
              +   ++     HT Y G
Sbjct: 169 KASEPPYSIDANLLHTSYEG 188


>gi|320323780|gb|EFW79864.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320327920|gb|EFW83925.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 366

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 48/185 (25%), Gaps = 10/185 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS      +++  +VE L     + +     C    R+ + +      
Sbjct: 2   KRVIVGMSGGVDSSVSAVLLMEQGYQVEGLFMKNWEEDDGTEYC--TAREDLADAQAVCD 59

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + H        +   +     +             +  R  I        A  LG 
Sbjct: 60  KIGIKLHT--ANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFKAFLDYALMLGA 116

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             I  G                              +G E       P+  L+K E   +
Sbjct: 117 DLIATGHYVRRRDIDGRTELLKGLDPNKDQSYFLHAVGGEQIARTLFPVGELEKPEVRAI 176

Query: 184 AQDIG 188
           A+  G
Sbjct: 177 AEKHG 181


>gi|302337414|ref|YP_003802620.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Spirochaeta smaragdinae DSM 11293]
 gi|301634599|gb|ADK80026.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Spirochaeta smaragdinae DSM 11293]
          Length = 360

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 49/192 (25%), Gaps = 11/192 (5%)

Query: 4   IIKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQR-----NKVELECRLCVR 57
           +      A+++  SGG DSS        +  R+   +  Y Q      N   +     + 
Sbjct: 1   MTNTHNDAVVIALSGGVDSSVAAWMLSRQSGRIFGATH-YIQDDSPCCNTKTIYRARVIC 59

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           + +                + +    +    + T N  ++  +      F      + + 
Sbjct: 60  RDLGIPYRLLDMRSSFRQSV-VDPFVETYRRAETPNPCVRCNERLRFGDFYHQVRRLLVE 118

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH---VTVHTPLMW 174
             A                     G    R     + + +  L          V  PL  
Sbjct: 119 EGALRETERPRIATGHYARTAVVDGVSYIRKGVDPSKDQSYMLYRIPRDVLPYVCFPLGE 178

Query: 175 LKKYETWKLAQD 186
             K E  ++A  
Sbjct: 179 YTKKEVVEIALR 190


>gi|152979876|ref|YP_001352537.1| argininosuccinate synthase [Janthinobacterium sp. Marseille]
 gi|226729193|sp|A6SW90|ASSY_JANMA RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|151279953|gb|ABR88363.1| argininosuccinate synthase [Janthinobacterium sp. Marseille]
          Length = 447

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 3/72 (4%)

Query: 1  MNDIIKK---APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M++I++         + FSGG D+S  L W   +       + + GQ ++ +        
Sbjct: 1  MSNILQSVPVNQKVGIAFSGGLDTSAALHWMRQKGAIPYAYTANLGQPDETDYNAIPEKA 60

Query: 58 KKIVELMPKWKD 69
          K     + +  D
Sbjct: 61 KAYGAELARLID 72


>gi|134094110|ref|YP_001099185.1| argininosuccinate synthase [Herminiimonas arsenicoxydans]
 gi|226729187|sp|A4G3H1|ASSY_HERAR RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|133738013|emb|CAL61058.1| argininosuccinate synthetase (Citrulline--aspartate ligase)
          [Herminiimonas arsenicoxydans]
          Length = 445

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 3/72 (4%)

Query: 1  MNDIIKK---APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M++I++         + FSGG D+S  L W   +       + + GQ ++ +        
Sbjct: 1  MSNILQSVPVNQKVGIAFSGGLDTSAALHWMRQKGAIPYAYTANLGQPDETDYNAIPEKA 60

Query: 58 KKIVELMPKWKD 69
          K     + +  D
Sbjct: 61 KAYGAELARLID 72


>gi|299822830|ref|ZP_07054716.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria grayi DSM 20601]
 gi|299816359|gb|EFI83597.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria grayi DSM 20601]
          Length = 370

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 48/185 (25%), Gaps = 12/185 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS        +   V  +   ++   ++  +       + ++ +  +  
Sbjct: 8   RVVVGMSGGVDSSVTAYLLKQQGYDVVGIFMKNWDDTDEFGVCTATEDYEDVIRVANQIG 67

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                     +           T  +A            +     I        A  LG 
Sbjct: 68  IPYYA-----VNFEKQYWDKVFTYFLAEYKLGRTPNPDVMC-NKEIKFKAFLEHAESLGA 121

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +  G          + +      +          L  E    V  PL  ++K E   +
Sbjct: 122 DYVATGHYARTEIVDGEVQLLRGVDNNKDQTYFLNQLSQEQLSKVMFPLGGMEKSEVRDI 181

Query: 184 AQDIG 188
           AQ  G
Sbjct: 182 AQKAG 186


>gi|182436538|ref|YP_001824257.1| GMP synthase [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326777161|ref|ZP_08236426.1| GMP synthase (glutamine-hydrolyzing) [Streptomyces cf. griseus
           XylebKG-1]
 gi|178465054|dbj|BAG19574.1| putative GMP synthase [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|326657494|gb|EGE42340.1| GMP synthase (glutamine-hydrolyzing) [Streptomyces cf. griseus
           XylebKG-1]
          Length = 528

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 52/186 (27%), Gaps = 14/186 (7%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             A+   SGG DS+   +        ++  +  D+G   K E E        +     K 
Sbjct: 227 KRAICGLSGGVDSAVAAALVQKAIGSQLTCVYVDHGLMRKGETEQVEK--DFVAATGAKL 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           K    E   L           +   +   K +        V  +  + ++          
Sbjct: 285 KVVDAEKRFLDAL--------AGVSDPEQKRKIIGREFIRVFEQAQLEILQEEGPEV--- 333

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   +               I++      L  +    +  PL  L K E   + Q++
Sbjct: 334 AFLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPDDIEFELVEPLRQLFKDEVRMVGQEL 393

Query: 188 GGQDLV 193
           G  D +
Sbjct: 394 GLPDEI 399


>gi|297618684|ref|YP_003706789.1| Queuosine synthesis-like protein [Methanococcus voltae A3]
 gi|297377661|gb|ADI35816.1| Queuosine synthesis-like protein [Methanococcus voltae A3]
          Length = 250

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 1/70 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
          +    ++ +SGG DS+     A    +    ++ D G  +K  L+      K +      
Sbjct: 14 RGKKVIVSYSGGVDSTLVAKLA-QNGEDCVAVTIDNGFFSKSSLKYAEKKAKLMNLKHVI 72

Query: 67 WKDSLGEDHI 76
             +  ++++
Sbjct: 73 IDVNQLDENV 82


>gi|73969262|ref|XP_538325.2| PREDICTED: similar to tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           1 isoform a [Canis familiaris]
          Length = 425

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/113 (12%), Positives = 29/113 (25%), Gaps = 9/113 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--------QRNKVELECRLCV 56
           ++ A   +   SGG DS+        R  +V  +                  + E    V
Sbjct: 1   MQAARHVVCALSGGVDSAVAALLLRRRGYQVTGVFMKNWDSLDEHGVCTADRDCEDAYRV 60

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
            + +     +    + E      +          T N  +    +   + F  
Sbjct: 61  CQILDIPFHQVS-YVKEYWNDVFSDFLSEYEKGRTPNPDIVCNKHIKFSCFFH 112


>gi|68474508|ref|XP_718627.1| hypothetical protein CaO19.7469 [Candida albicans SC5314]
 gi|46440405|gb|EAK99711.1| hypothetical protein CaO19.7469 [Candida albicans SC5314]
          Length = 493

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 42/138 (30%), Gaps = 16/138 (11%)

Query: 2   NDIIKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           N  + K    + L +SGG D+S  L+W L++   V     + GQ    E +     +K +
Sbjct: 75  NRNMSKGK--VCLAYSGGLDTSVILAWLLEQGYEVIAFLANIGQ----EEDFEEAEKKAL 128

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                     +G    + + +  +         +       N+          +      
Sbjct: 129 A---------IGATKFVVVDVRKEFVEKVCFPAIQSNAIYENVYLLGTSLARPVIAQAQI 179

Query: 121 TLAYRLGITNIVIGVCET 138
            +A   G   +  G    
Sbjct: 180 KVAEENGCFAVSHGCTGK 197


>gi|330881196|gb|EGH15345.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 303

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 48/185 (25%), Gaps = 10/185 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS      +++  +VE L     + +     C    R+ + +      
Sbjct: 2   KRVIVGMSGGVDSSVSAVLLMEQGYQVEGLFMKNWEEDDGTEYC--TAREDLADAQAVCD 59

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + H        +   +     +             +  R  I        A  LG 
Sbjct: 60  KIGIKLHT--ANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFKAFLDYALMLGA 116

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             I  G                              +G E       P+  L+K E   +
Sbjct: 117 DLIATGHYVRRRDIDGRTELLKGLDPNKDQSYFLHAVGGEQIARTLFPVGELEKPEVRAI 176

Query: 184 AQDIG 188
           A+  G
Sbjct: 177 AEKHG 181


>gi|196039389|ref|ZP_03106695.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus NVH0597-99]
 gi|206976034|ref|ZP_03236944.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus H3081.97]
 gi|217961886|ref|YP_002340456.1| tRNA-specific 2-thiouridylase MnmA [Bacillus cereus AH187]
 gi|218905591|ref|YP_002453425.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus AH820]
 gi|225866378|ref|YP_002751756.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus 03BB102]
 gi|196030016|gb|EDX68617.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus NVH0597-99]
 gi|206745786|gb|EDZ57183.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus H3081.97]
 gi|217066211|gb|ACJ80461.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus AH187]
 gi|218535576|gb|ACK87974.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus AH820]
 gi|225789110|gb|ACO29327.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus 03BB102]
          Length = 372

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 53/193 (27%), Gaps = 11/193 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN +  +    ++  SGG DSS       ++   V  +             C     +  
Sbjct: 2   MNKLPHET-RVVIGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            +      + +    PN  V     I      
Sbjct: 59  NDVIEVCNQIGIPYYAVN---FEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAFL 115

Query: 121 TLAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWL 175
             A  LG   +  G           Y   R       +T     L  E       PL  L
Sbjct: 116 EHAIALGADYVATGHYARVAYMDGEYKMLRGVDDNKDQTYFLNQLSQEQLSKTMFPLGEL 175

Query: 176 KKYETWKLAQDIG 188
           KK +  ++A++ G
Sbjct: 176 KKPQIREMAKEAG 188


>gi|308809381|ref|XP_003082000.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (ISS)
           [Ostreococcus tauri]
 gi|116060467|emb|CAL55803.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (ISS)
           [Ostreococcus tauri]
          Length = 467

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 39/182 (21%), Gaps = 8/182 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLC-VRKKIVELMP 65
           K     +L SGG DSS  L+                  +         C   + +     
Sbjct: 82  KPLRVAVLLSGGVDSSVALALLRAAGHECRAFYLQIWFQEDFRNTWEECPWEEDLRVAEG 141

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY- 124
                  E   +PL         S +     + +  N                    A+ 
Sbjct: 142 VCARVGVELETVPLTDAYWNLVVSDSVEEIRRGRTPNPDVLCNSRVKFGAFREWLAKAHP 201

Query: 125 ------RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
                   G    V     T  +                 NL  E    V  P+  + K 
Sbjct: 202 GEFDRVASGHYAAVERDAVTGEASLVMSGDAFKDQTYFLANLTQEQLRAVSFPVGGMPKA 261

Query: 179 ET 180
           + 
Sbjct: 262 DI 263


>gi|324328299|gb|ADY23559.1| tRNA-specific 2-thiouridylase MnmA [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 371

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 53/193 (27%), Gaps = 11/193 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN +  +    ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MNKLPHET-RVVIGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            +      + +    PN  V     I      
Sbjct: 58  NDVIEVCNQIGIPYYAVN---FEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWL 175
             A  LG   +  G           Y   R       +T     L  E       PL  L
Sbjct: 115 EHAIALGADYVATGHYARVAYMDGEYKMLRGVDDNKDQTYFLNQLSQEQLSKTMFPLGEL 174

Query: 176 KKYETWKLAQDIG 188
           KK +  ++A++ G
Sbjct: 175 KKPQIREMAKEAG 187


>gi|212702277|ref|ZP_03310405.1| hypothetical protein DESPIG_00288 [Desulfovibrio piger ATCC 29098]
 gi|212674270|gb|EEB34753.1| hypothetical protein DESPIG_00288 [Desulfovibrio piger ATCC 29098]
          Length = 402

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 60/225 (26%), Gaps = 20/225 (8%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + K     +L +SGG D+S  L W ++ +   V T++ D GQ   +        +     
Sbjct: 1   MNKDIKKVVLAYSGGLDTSVILKWLIETYKCEVITVTADLGQPEDLSGVEAKAYK----- 55

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                K  + +                  +     +   ++    +    +         
Sbjct: 56  -TGASKAYVVDLREEMARDFVFPMMRGAARYENRYMLGTSIARPIITKALVDIARKEGAD 114

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A   G T         +++         + A     +L   + +        +      K
Sbjct: 115 AIAHGATGKGNDQVRFEFAAKALAPDLKVIAPWREWDLMSRTALNAFAEKHGIP---ISK 171

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLR 227
            A+       +       HT + G   +            +CY R
Sbjct: 172 EAKRYSMDANMM------HTSFEGSELEDPGNAPH----ESCYER 206


>gi|189426197|ref|YP_001953374.1| argininosuccinate synthase [Geobacter lovleyi SZ]
 gi|189422456|gb|ACD96854.1| Argininosuccinate synthase [Geobacter lovleyi SZ]
          Length = 405

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/198 (12%), Positives = 56/198 (28%), Gaps = 11/198 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L +SGG D+S  L W  +     +   S D GQ +++       ++          
Sbjct: 8   KKIVLAYSGGLDTSIILKWLKNEYGAEIVAFSADLGQGDELAPVREKALK------TGAS 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              + +     +         +        +   ++    +  R +         A   G
Sbjct: 62  TVYIDDLREEFVRDFVYPMFRANAIYEGHYLLGTSIARPLIAKRQMEIAKLEGCDAVSHG 121

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP----LMWLKKYETWKL 183
            T         + + Y      ++ A      L     +  +       + + K   W  
Sbjct: 122 ATGKGNDQVRFELAYYHFDPSISVIAPWREWKLNSRKALIAYAKKNDIPIPITKKRPWSS 181

Query: 184 AQDIGGQDLVNLILEESH 201
            +++        ILE++ 
Sbjct: 182 DRNLLHISFEGGILEDTW 199


>gi|59801573|ref|YP_208285.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae FA 1090]
 gi|293399659|ref|ZP_06643811.1| tRNA methyl transferase [Neisseria gonorrhoeae F62]
 gi|59718468|gb|AAW89873.1| putative tRNA methyltransferase [Neisseria gonorrhoeae FA 1090]
 gi|291609910|gb|EFF39033.1| tRNA methyl transferase [Neisseria gonorrhoeae F62]
          Length = 383

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 47/191 (24%), Gaps = 11/191 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN       + ++  SGG DSS   +    +  +V  +     + +  +  C +      
Sbjct: 17  MN-TTSNTSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWENDDNDEYCSIKQ---- 71

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +       +      + +          +      +      PN  V     I      
Sbjct: 72  -DSFDAIAVADIVGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLCNAEIKFKCFL 130

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A   G   I  G      +                       L          PL  L
Sbjct: 131 DYAVGQGADTIATGHYARKEARNGVHYLLKGLDRNKDQSYFLYRLKPFQLERAIFPLGGL 190

Query: 176 KKYETWKLAQD 186
           +K E  +LA +
Sbjct: 191 EKPEVRRLAAE 201


>gi|71658016|sp|Q5F7G4|MNMA_NEIG1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 367

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 47/191 (24%), Gaps = 11/191 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN       + ++  SGG DSS   +    +  +V  +     + +  +  C +      
Sbjct: 1   MN-TTSNTSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWENDDNDEYCSIKQ---- 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +       +      + +          +      +      PN  V     I      
Sbjct: 56  -DSFDAIAVADIVGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLCNAEIKFKCFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A   G   I  G      +                       L          PL  L
Sbjct: 115 DYAVGQGADTIATGHYARKEARNGVHYLLKGLDRNKDQSYFLYRLKPFQLERAIFPLGGL 174

Query: 176 KKYETWKLAQD 186
           +K E  +LA +
Sbjct: 175 EKPEVRRLAAE 185


>gi|89094683|ref|ZP_01167619.1| argininosuccinate synthase [Oceanospirillum sp. MED92]
 gi|89081029|gb|EAR60265.1| argininosuccinate synthase [Oceanospirillum sp. MED92]
          Length = 408

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 50/158 (31%), Gaps = 9/158 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +    +L +SGG D+S  + W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MSEIKKVVLAYSGGLDTSVIVRWLQDEYNAEVVTFTADLGQGEEVEPARAKAEALGVKEI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                ++    D + P+         + T      +   ++    +  R I         
Sbjct: 61  YIEDLREEFVRDFVFPM-------FRANTIYEGEYLLGTSIARPLIAKRLIEIANETGAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         +   Y       + A     +L
Sbjct: 114 AISHGATGKGNDQVRFELGAYALKPGVHVIAPWREWDL 151


>gi|84497925|ref|ZP_00996722.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Janibacter sp. HTCC2649]
 gi|84381425|gb|EAP97308.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Janibacter sp. HTCC2649]
          Length = 529

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 55/186 (29%), Gaps = 11/186 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS   +       D++  +  D+G     E      VR++ V      
Sbjct: 225 KRVLCALSGGVDSSVAAALVQRAVGDQLTCVFVDHGLLRSGE---AEQVRQEFVAATGVD 281

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             ++          L  ++  S  +     I    +       R+++    +        
Sbjct: 282 LVTVDA----KDQFLSALAGVSDPEEKRKIIGREFIRVFEQAARDVVGSAESDGHPVE-- 335

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   +               I++      L  +    +  PL  L K E  ++  ++
Sbjct: 336 -FLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPDDLQFKLVEPLRLLFKDEVRQVGLEL 394

Query: 188 GGQDLV 193
           G  + +
Sbjct: 395 GVPEAI 400


>gi|119480067|ref|XP_001260062.1| argininosuccinate synthase [Neosartorya fischeri NRRL 181]
 gi|119408216|gb|EAW18165.1| argininosuccinate synthase [Neosartorya fischeri NRRL 181]
          Length = 416

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 3/65 (4%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          + K    +  FSGG D+S  L W +D    V   + D GQ  + + +       K+  + 
Sbjct: 1  MSKGKVCVA-FSGGLDTSVILKWLIDEGYEVVAFTADVGQ--EEDFDAIREKALKLGAVK 57

Query: 65 PKWKD 69
           +  D
Sbjct: 58 CEIAD 62


>gi|116872941|ref|YP_849722.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Listeria welshimeri serovar 6b str. SLCC5334]
 gi|123461086|sp|A0AIW1|MNMA_LISW6 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|116741819|emb|CAK20943.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 371

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/185 (11%), Positives = 47/185 (25%), Gaps = 12/185 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS       ++   V  +   ++   ++  +         ++ +  +  
Sbjct: 9   RVVVGMSGGVDSSVTAHILKEQGYDVIGIFMKNWDDTDEFGVCTATEDYDDVIRVANQIG 68

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                     +    +      T  +             +     I        A  LG 
Sbjct: 69  IPYYA-----VNFEKEYWDKVFTYFLEEYKLGRTPNPDVMC-NKEIKFKAFLEHAESLGA 122

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +  G          +        +          L  +    V  PL  ++K E  ++
Sbjct: 123 DYVATGHYAQVKKIGDEIELLRGVDNNKDQTYFLNQLSQDQLKKVMFPLGGMEKTEVREI 182

Query: 184 AQDIG 188
           A   G
Sbjct: 183 ATKAG 187


>gi|314936263|ref|ZP_07843610.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus hominis subsp. hominis C80]
 gi|313654882|gb|EFS18627.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus hominis subsp. hominis C80]
          Length = 370

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 49/189 (25%), Gaps = 11/189 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  K    ++  SGG DSS       ++   V  +             C     +   ++
Sbjct: 1   MSNKDIRVVVGMSGGVDSSVTAYLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDYNDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +          + +            +      + +    PN  V     I        A
Sbjct: 59  IAVCNQIGIPYYAVN---FEKEYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLEHA 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLKK 177
            +LG   +  G     +                         L  E    V  P+  ++K
Sbjct: 116 LKLGADYVATGHYARIHRHEDGHVEMLRGVDNNKDQTYFLNQLSQEQLSKVMFPIGDIEK 175

Query: 178 YETWKLAQD 186
            +  K+A++
Sbjct: 176 KDVRKIAEE 184


>gi|295402654|ref|ZP_06812599.1| GMP synthase, large subunit [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312112492|ref|YP_003990808.1| GMP synthase, large subunit [Geobacillus sp. Y4.1MC1]
 gi|294975311|gb|EFG50944.1| GMP synthase, large subunit [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311217593|gb|ADP76197.1| GMP synthase, large subunit [Geobacillus sp. Y4.1MC1]
          Length = 512

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 58/186 (31%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 218 KKVLCALSGGVDSSVAAVLVHRAIGDQLTCIFVDHGLLRKGE---AESVMKTFRE----- 269

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    +      +   S L   +  + +   + N F+   +          A   G
Sbjct: 270 ----GFQMNVIKVDAKERFLSKLKGVIDPEQKRKIIGNEFIYVFDDEA-------AKLEG 318

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +V G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 319 IEFLVQGTLYTDIIESGTATAQTIKSHHNVGGLPEDMKFKLIEPLKTLFKDEVRALGTEL 378

Query: 188 GGQDLV 193
           G  D +
Sbjct: 379 GLPDEI 384


>gi|239943680|ref|ZP_04695617.1| GMP synthase [Streptomyces roseosporus NRRL 15998]
 gi|239990132|ref|ZP_04710796.1| GMP synthase [Streptomyces roseosporus NRRL 11379]
 gi|291447144|ref|ZP_06586534.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Streptomyces roseosporus NRRL 15998]
 gi|291350091|gb|EFE76995.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Streptomyces roseosporus NRRL 15998]
          Length = 528

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 52/186 (27%), Gaps = 14/186 (7%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             A+   SGG DS+   +        ++  +  D+G   K E E        +     K 
Sbjct: 227 KRAICGLSGGVDSAVAAALVQKAIGSQLTCVYVDHGLMRKGETEQVEK--DFVAATGAKL 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           K    E   L           +   +   K +        V  +  + ++          
Sbjct: 285 KVVDAEKRFLDAL--------AGVSDPEQKRKIIGREFIRVFEQAQLEILQEEGPEV--- 333

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   +               I++      L  +    +  PL  L K E   + Q++
Sbjct: 334 AFLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPDDIEFQLVEPLRQLFKDEVRMVGQEL 393

Query: 188 GGQDLV 193
           G  + +
Sbjct: 394 GLPEEI 399


>gi|225848894|ref|YP_002729058.1| GMP synthase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643531|gb|ACN98581.1| GMP synthase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 511

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 61/201 (30%), Gaps = 23/201 (11%)

Query: 1   MNDIIK-----KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRL 54
           M +I+K         A+   SGG DSS       +   D +  +  D G   K E   R 
Sbjct: 202 MEEIVKIRQTVGNKKAICALSGGVDSSVAAVLVHNAIGDNLTCIFVDNGLLRKGE---RE 258

Query: 55  CVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            V K   +        + +     L  L  I+     + +   +            +++ 
Sbjct: 259 QVEKTFRDNFH-IPLIVVDARERFLNALKGITDPEQKRKIIGNLFIEVFEEEAKKLKDVE 317

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
           FLV        +              S         I+       L    ++ +  PL  
Sbjct: 318 FLVQGTLYPDVIE-------------SVSVKGPSAVIKTHHNVGGLPERMNLKLIEPLRE 364

Query: 175 LKKYETWKLAQDIGGQDLVNL 195
           L K E  +L +++G  D +  
Sbjct: 365 LFKDEVRELGKELGLPDEIIY 385


>gi|196044752|ref|ZP_03111986.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus 03BB108]
 gi|196024240|gb|EDX62913.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus 03BB108]
          Length = 372

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 53/193 (27%), Gaps = 11/193 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN +  +    ++  SGG DSS       ++   V  +             C     +  
Sbjct: 2   MNKLPHET-RVVIGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            +      + +    PN  V     I      
Sbjct: 59  NDVIEVCNQIGIPYYAVN---FEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAFL 115

Query: 121 TLAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWL 175
             A  LG   +  G           Y   R       +T     L  E       PL  L
Sbjct: 116 EHAIALGADYVATGHYARVAYMDGEYKMLRGVDDNKDQTYFLNQLSQEQLSKTMFPLGEL 175

Query: 176 KKYETWKLAQDIG 188
           KK +  ++A++ G
Sbjct: 176 KKPQIREMAKEAG 188


>gi|156844405|ref|XP_001645265.1| hypothetical protein Kpol_1037p3 [Vanderwaltozyma polyspora DSM
          70294]
 gi|156115925|gb|EDO17407.1| hypothetical protein Kpol_1037p3 [Vanderwaltozyma polyspora DSM
          70294]
          Length = 420

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 5/59 (8%)

Query: 5  IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + K    + L +SGG D+S  L+W L++   V     + GQ  + + E       KI  
Sbjct: 1  MSKGK--VCLAYSGGLDTSVILAWLLEQGYEVIAFMANVGQ--EEDFEAAKEKALKIGA 55


>gi|158319927|ref|YP_001512434.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Alkaliphilus oremlandii OhILAs]
 gi|205811148|sp|A8MEV9|MNMA_ALKOO RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|158140126|gb|ABW18438.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Alkaliphilus oremlandii OhILAs]
          Length = 364

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/201 (12%), Positives = 48/201 (23%), Gaps = 11/201 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+   K     ++  SGG DSS        +   V  +       +     C     +  
Sbjct: 1   MSKAPKDT-KVVIGMSGGVDSSVAALLLKQQGYDVVGIFMKNWDESDELGYC--TSAEDY 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            +      + +    PN  V     I      
Sbjct: 58  EDVRRVCDQIGIPYYSVN---FEKEYWDRVFTYFLNEYKAGRTPNPDVMCNKEIKFKAFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A +LG   +  G          + R                 L          P+  L
Sbjct: 115 DHAIKLGADYLATGHYAQVDYSDGEYRLLRGVDTNKDQTYFLNQLNQYQLSKAMFPVGHL 174

Query: 176 KKYETWKLAQDIGGQDLVNLI 196
           +K +  ++A D G        
Sbjct: 175 QKKDLRQIALDAGLATASKKD 195


>gi|68487427|ref|XP_712412.1| hypothetical protein CaO19.2137 [Candida albicans SC5314]
 gi|68487717|ref|XP_712269.1| hypothetical protein CaO19.9684 [Candida albicans SC5314]
 gi|46433643|gb|EAK93076.1| hypothetical protein CaO19.9684 [Candida albicans SC5314]
 gi|46433797|gb|EAK93226.1| hypothetical protein CaO19.2137 [Candida albicans SC5314]
          Length = 483

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 47/181 (25%), Gaps = 5/181 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                  +  SGG DS     +       +  ++ D+  R +   E      +     + 
Sbjct: 19  NAPKKVAVALSGGPDSMLLTWFLSQCKFEIYAITIDHKYRPESSREALSVYERVKNWNLN 78

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
               SL     +    L +    +  K      Q     +  V            T   R
Sbjct: 79  HIIKSLDYPAGVDPTKLNNFEEIARGKRYEAMAQVCYDKDIPVLFLGHHRDDQLETFIQR 138

Query: 126 L-GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           L G ++I         S  P  +  +  +          S V +  P     K +  +  
Sbjct: 139 LQGNSSIFGLAGTHKVSPLPISKDLSPTSAL----FNQTSQVRILRPFWDYDKQDILETC 194

Query: 185 Q 185
           Q
Sbjct: 195 Q 195


>gi|315920277|ref|ZP_07916517.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313694152|gb|EFS30987.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 361

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/192 (8%), Positives = 46/192 (23%), Gaps = 11/192 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + ++    L+  SGG DS+       ++   +  ++         E +    +  ++   
Sbjct: 1   MEERNKRVLVGMSGGIDSTATCLMLQEQGYEIVGVTMRVWGD---EPQDARELAVRMGIE 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                + +     +    + +                  + N     R +         A
Sbjct: 58  HYVADERIPFKETIVKNFIDEYKQGRTPNP-------CVMCNPLFKFRVLTEWADKLNCA 110

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           +        +                  ++      LG E       PL    K +  + 
Sbjct: 111 WIATGHYSRLEEKNGYTYIVAGDDDKKDQSYF-LWRLGQEVLKRCIFPLGDYTKVKVREY 169

Query: 184 AQDIGGQDLVNL 195
             + G +     
Sbjct: 170 LAEKGYEAKSKE 181


>gi|32490853|ref|NP_871107.1| hypothetical protein WGLp104 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|30173418|sp|Q8D397|MNMA_WIGBR RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|25166059|dbj|BAC24250.1| ycfB [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 368

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/172 (11%), Positives = 46/172 (26%), Gaps = 8/172 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--------RLCV 56
           + K    ++  SGG DSS    +       VE +     +     ++C           V
Sbjct: 1   MNKKKKVIIAISGGVDSSVSAWFLKKSGYHVEGVFMKNWEEINSSIKCTFKKDLKDAQIV 60

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
             +I   +     S    + +    L +    +      +  ++             +  
Sbjct: 61  CDQIGININIVNFSEQYWNKVFKIFLREYKIGNTPNPDILCNKEIKFKYFLNFAIKEMQA 120

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV 168
            + AT  Y   I         + +    D  +   +     ++  +     +
Sbjct: 121 DYIATGHYVRKINFNGKSQLFSAFDLKKDQSYFLHQINYKELSKCIFPIGNI 172


>gi|330891825|gb|EGH24486.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas syringae pv. mori str.
           301020]
          Length = 255

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 25/68 (36%), Gaps = 2/68 (2%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKWKD 69
           L+L SGG DS+      + R        F+ G R      +E    + KK          
Sbjct: 183 LVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAHELGVMEVAHFIWKKYGSSQRVLFV 242

Query: 70  SLGEDHIL 77
           S+  + +L
Sbjct: 243 SVPFEEVL 250


>gi|309812162|ref|ZP_07705920.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Dermacoccus sp. Ellin185]
 gi|308433849|gb|EFP57723.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Dermacoccus sp. Ellin185]
          Length = 384

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 49/188 (26%), Gaps = 10/188 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR--KKIVELMPKW 67
             +   SGG DS+   S  L+    V  +     Q      E        +   +     
Sbjct: 2   RVVAAMSGGVDSAVAASRMLEAGHDVVGVHLALSQSAATLRESARGCCTIEDAGDARRVA 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                  ++     + +   + + ++   + +    PN  +     I        A  LG
Sbjct: 62  DRLGIPFYVWD---MAERFKADVVEDFVAEYEAGRTPNPCLRCNEKIKFAALLDKALALG 118

Query: 128 --ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM---ESHVTVHTPLMWLKKYETWK 182
                        +     +       A + +  LG+   E       PL    K +  +
Sbjct: 119 FDAVATGHYAQIVEGPNGKELHRAVDMAKDQSYVLGVLDAEQLAHSFFPLGDTTKPQIRE 178

Query: 183 LAQDIGGQ 190
            A   G  
Sbjct: 179 EAAAKGFY 186


>gi|307545655|ref|YP_003898134.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methylt ransferase
           [Halomonas elongata DSM 2581]
 gi|307217679|emb|CBV42949.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Halomonas elongata DSM 2581]
          Length = 370

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 52/190 (27%), Gaps = 10/190 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +       ++  SGG DSS      L++   VE L       +     C    ++ + + 
Sbjct: 1   MSASNGKVIVGMSGGVDSSVSAQLLLEQGFDVEGLFMKNWDEDDGTEYC--TAKEDLADA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      H    A        ++ ++   + Q    PN  +     I        A
Sbjct: 59  EAVCAKLGIHLHT---ANFAAEYWDNVFEHFLAEYQAGRTPNPDILCNREIKFKVFLEYA 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-----TVHTPLMWLKKY 178
             LG   I  G            R           +  + +           P+  L+K 
Sbjct: 116 EMLGADWIATGHYVRRAERDGHARLLKGLDANKDQSYFLHAVPEAAIARSLFPVGELEKS 175

Query: 179 ETWKLAQDIG 188
           E   +A+  G
Sbjct: 176 EVRDIAERHG 185


>gi|194290687|ref|YP_002006594.1| tRNA-specific 2-thiouridylase mnma [Cupriavidus taiwanensis LMG
           19424]
 gi|229486340|sp|B3R6Q0|MNMA_CUPTR RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|193224522|emb|CAQ70533.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Cupriavidus taiwanensis LMG 19424]
          Length = 361

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 45/194 (23%), Gaps = 11/194 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +   A   ++  SGG DSS        +   V  L     + +     C         + 
Sbjct: 1   MSGAAKRVVVGMSGGVDSSVTAWLLKQQGYEVIGLFMKNWEDDDDSEYCSTRQ-----DW 55

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +     +      +            +  +   +      PN  V     I        A
Sbjct: 56  LDVVSVADLIGVDVEAVNFAAEYKDRVFADFLREYSAGRTPNPDVLCNAEIKFKAFLDHA 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCR------HDTIRAIETAINLGMESHVTVHTPLMWLKK 177
             LG   I  G                     T         L          PL  + K
Sbjct: 116 MSLGAETIATGHYARVRQNAAGRFELLKALDHTKDQSYFLHRLNQAQLSRTLFPLGEIPK 175

Query: 178 YETWKLAQDIGGQD 191
               ++A +IG  +
Sbjct: 176 TRVREIAAEIGLPN 189


>gi|152997270|ref|YP_001342105.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Marinomonas sp. MWYL1]
 gi|205816876|sp|A6W0E1|MNMA_MARMS RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|150838194|gb|ABR72170.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Marinomonas sp. MWYL1]
          Length = 390

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 52/185 (28%), Gaps = 10/185 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS      + +  +VE L       +     C    +  + +      
Sbjct: 31  KKVIVGMSGGVDSSVSALILMQQGYQVEGLFMKNWDEDDGTEYC--TAKDDLADAQAVSD 88

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + H    A        ++ ++   + +    PN  +     I        A  L  
Sbjct: 89  KLGIKLHT---ANFASEYWDNVFEHFLAEYKAGRTPNPDILCNKEIKFKAFLEYAMALNA 145

Query: 129 TNIVIGVCETDYSGYPDC-----RHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             I  G          +                   +G +       P+  L+K E  +L
Sbjct: 146 DYIATGHYVRRGEKNGEPLLLKGLDGNKDQSYFLYAVGKDEIAKTLFPVGELEKTEVRRL 205

Query: 184 AQDIG 188
           A++ G
Sbjct: 206 AEEFG 210


>gi|91793917|ref|YP_563568.1| thiamine biosynthesis protein ThiI [Shewanella denitrificans OS217]
 gi|123356624|sp|Q12L31|THII_SHEDO RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|91715919|gb|ABE55845.1| thiamine biosynthesis protein [Shewanella denitrificans OS217]
          Length = 486

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 62/196 (31%), Gaps = 27/196 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-RNKVELECRLCVRKKIVEL 63
           +      L L SGG DS       + +  R     F+ G  ++++           + ++
Sbjct: 176 MATQEDVLSLISGGFDSGVSSFQFIKKGARTHYCFFNLGGSQHEIG----------VKQV 225

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                 + GE H +          S   + V  +I +             + +  A  LA
Sbjct: 226 AYHLWKTYGESHKVKFI-------SVPFEGVVQEILERIDNGQMGVILKRVMMRAATLLA 278

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            + GI  +V G      S       + I      +         +  PL+ + K +    
Sbjct: 279 DKYGIQALVTGESLGQVSSQTLTNLNVIDRCTDLL---------ILRPLIAMDKQDIINQ 329

Query: 184 AQDIGGQDLVNLILEE 199
           ++ IG +D    I E 
Sbjct: 330 SRIIGTEDFAKSIPEY 345


>gi|326387235|ref|ZP_08208845.1| argininosuccinate synthase [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208416|gb|EGD59223.1| argininosuccinate synthase [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 404

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 45/158 (28%), Gaps = 5/158 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +    +L +SGG D+S  L W        V T + D GQ  ++E        + +   
Sbjct: 1   MSEIKRVVLAYSGGLDTSVILKWLQVTYNCEVVTFTADLGQGEELEP--ARAKAELLGIK 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +         +  +     +   ++    +  R I         A
Sbjct: 59  PEHI--YIDDLREEFVRDFVFPMMRANARYEGDYLLGTSIARPLISKRLIEIAKETGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
              G T         + S Y       + A     +L 
Sbjct: 117 VSHGATGKGNDQVRFELSAYALDPSIKVIAPWREWDLA 154


>gi|307545333|ref|YP_003897812.1| argininosuccinate synthase [Halomonas elongata DSM 2581]
 gi|307217357|emb|CBV42627.1| argininosuccinate synthase [Halomonas elongata DSM 2581]
          Length = 406

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 53/174 (30%), Gaps = 9/174 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  + W  + +   V T + D GQ  +VE          + E+
Sbjct: 1   MSDVKKVVLAYSGGLDTSVIVKWLQETYDCEVVTFTADIGQGEEVEPARAKAEALGVKEI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                ++    D++ P+         + T      +   ++    +  R +         
Sbjct: 61  YIEDLREEFVRDYVYPM-------FRANTIYEGEYLLGTSIARPLITKRLVEIANQTGAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
           A   G T         +   Y       + A     +L     +  +     + 
Sbjct: 114 AISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLNSREKLMAYCQQHDIP 167


>gi|262037400|ref|ZP_06010864.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Leptotrichia goodfellowii F0264]
 gi|261748562|gb|EEY35937.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Leptotrichia goodfellowii F0264]
          Length = 364

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/196 (9%), Positives = 47/196 (23%), Gaps = 27/196 (13%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K     ++  SGG DSS       +    V  ++                    +  L  
Sbjct: 5   KDNKKVIVGMSGGIDSSVAALLLKNEGYEVIGVT--------------------LKHLPD 44

Query: 66  KWKDSLGEDH--ILPLAILGDISHS----SLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +  ++ G+    +  ++      ++      T NV  + Q   +                
Sbjct: 45  ELSENPGKTCCSLDDISDAKMTCYTLGIPHYTINVVEEFQKEVMDYFIKMYNEGKTPSPC 104

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
                ++ I  +V    +T         +         +          +     L K  
Sbjct: 105 IICDEKVKIKKLVDFADKTGVKYIATGHYSKKSMNNLLLWDENNPKDQSYMLYR-LDKSV 163

Query: 180 TWKLAQDIGGQDLVNL 195
             +    +   +   +
Sbjct: 164 IERFLFPLSEYEKPTV 179


>gi|186477293|ref|YP_001858763.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia phymatum STM815]
 gi|205811492|sp|B2JGI9|MNMA_BURP8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|184193752|gb|ACC71717.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia phymatum STM815]
          Length = 384

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 45/189 (23%), Gaps = 10/189 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS       ++   V  L     + +     C         + +   
Sbjct: 3   KQRVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDSEYCSTRQ-----DWIDVV 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +      +            +      +      PN  V     I        A  LG
Sbjct: 58  SVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLG 117

Query: 128 ITNIVIGVCETDYSGYPDC-----RHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G                 R  T         L          PL  + K +  +
Sbjct: 118 AETIATGHYARVREIDGRFELLKARDHTKDQSYFLHRLNQAQLSKTLFPLGDIPKTKVRE 177

Query: 183 LAQDIGGQD 191
           +A+ IG  +
Sbjct: 178 IAEQIGLPN 186


>gi|163942146|ref|YP_001647030.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus weihenstephanensis KBAB4]
 gi|205812536|sp|A9VIM2|MNMA_BACWK RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|163864343|gb|ABY45402.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus weihenstephanensis KBAB4]
          Length = 371

 Score = 51.1 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 53/193 (27%), Gaps = 11/193 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN + ++    ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MNKLPQET-RVVIGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDANGVC--TATEDY 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            +      + +    PN  V     I      
Sbjct: 58  NDVIEVCNQIGIPYYAVN---FEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWL 175
             A  LG   +  G           Y   R       +T     L  E       PL  L
Sbjct: 115 EHAIALGADYVATGHYARVAYMDGEYKMLRGVDDNKDQTYFLNQLSQEQLSKTMFPLGEL 174

Query: 176 KKYETWKLAQDIG 188
           KK +  ++A + G
Sbjct: 175 KKPQIREMATEAG 187


>gi|307721702|ref|YP_003892842.1| GMP synthase (glutamine-hydrolyzing) [Sulfurimonas autotrophica DSM
           16294]
 gi|306979795|gb|ADN09830.1| GMP synthase (glutamine-hydrolyzing) [Sulfurimonas autotrophica DSM
           16294]
          Length = 516

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 56/186 (30%), Gaps = 18/186 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS   +   +   D++  +  D G   K E E    V  KI    P   
Sbjct: 221 KVLCGLSGGVDSSVVAAMLYEAIGDQLIPVFVDNGLLRKGEREQVEEVF-KINLKAPLIT 279

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               +        LG ++  S  +     I    +       +    + F A        
Sbjct: 280 VDAVD------NFLGKLAGVSDPEQKRKIIGHTFIEEFEKEAKKHDGIKFLA-------- 325

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   S   +   + I++      L       +  PL  L K E  K+  ++G
Sbjct: 326 --QGTLYPDVIESISVNGPSEVIKSHHNVGGLPDWMDFELIEPLRELFKDEVRKIGFELG 383

Query: 189 GQDLVN 194
             + + 
Sbjct: 384 LPEGMI 389


>gi|307152944|ref|YP_003888328.1| GMP synthase large subunit [Cyanothece sp. PCC 7822]
 gi|306983172|gb|ADN15053.1| GMP synthase, large subunit [Cyanothece sp. PCC 7822]
          Length = 528

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 54/186 (29%), Gaps = 11/186 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST          D++  +  D G   K E E    + +   +     
Sbjct: 225 KRVLLALSGGVDSSTLAFLLHRAIGDQLTCMFIDQGFMRKGEPE---RLVQIFDQQFHIP 281

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       L  L  +       +   K +        V       L     LA    
Sbjct: 282 VVYVNSRERF-LTQLKGV------TDPEEKRRLIGHEFIKVFEEESNRLGPFDYLAQGTL 334

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +++            +     I++      L       +  PL  L K E  KLA+ I
Sbjct: 335 YPDVIESADSNVDPQTGERVAVKIKSHHNVGGLPKNLRFKLVEPLRKLFKDEVRKLARAI 394

Query: 188 GGQDLV 193
           G  + +
Sbjct: 395 GLPEEI 400


>gi|78776623|ref|YP_392938.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Sulfurimonas denitrificans DSM 1251]
 gi|91206838|sp|Q30TH8|GUAA_SULDN RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|78497163|gb|ABB43703.1| GMP synthase (glutamine-hydrolyzing) [Sulfurimonas denitrificans
           DSM 1251]
          Length = 516

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 18/188 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   L   SGG DSS   +   +   D++  +  D G   K E E    V K    +  K
Sbjct: 219 SGKVLCGLSGGVDSSVVAAMLYEAIGDQLVPVFVDNGLLRKGEREQVEEVFK----INLK 274

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               + +     L+ L  +S     + +                  I FL         +
Sbjct: 275 VPLVVVDARENFLSKLAGVSDPEKKRKIIGHTFIEEFEKEAKKHDGIKFLAQGTLYPDVI 334

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                         S   +   + I++      L       +  PL  L K E  K+  +
Sbjct: 335 E-------------SISVNGPSEVIKSHHNVGGLPDWMDFELIEPLRELFKDEVRKIGLE 381

Query: 187 IGGQDLVN 194
           +G  + + 
Sbjct: 382 LGLPESMI 389


>gi|30264466|ref|NP_846843.1| tRNA-specific 2-thiouridylase MnmA [Bacillus anthracis str. Ames]
 gi|47529924|ref|YP_021273.1| tRNA-specific 2-thiouridylase MnmA [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49187287|ref|YP_030539.1| tRNA-specific 2-thiouridylase MnmA [Bacillus anthracis str. Sterne]
 gi|254684152|ref|ZP_05148012.1| tRNA-specific 2-thiouridylase MnmA [Bacillus anthracis str.
           CNEVA-9066]
 gi|254736499|ref|ZP_05194205.1| tRNA-specific 2-thiouridylase MnmA [Bacillus anthracis str. Western
           North America USA6153]
 gi|254741537|ref|ZP_05199224.1| tRNA-specific 2-thiouridylase MnmA [Bacillus anthracis str. Kruger
           B]
 gi|254751364|ref|ZP_05203401.1| tRNA-specific 2-thiouridylase MnmA [Bacillus anthracis str. Vollum]
 gi|254757696|ref|ZP_05209723.1| tRNA-specific 2-thiouridylase MnmA [Bacillus anthracis str.
           Australia 94]
 gi|73919893|sp|Q81JE5|MNMA_BACAN RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|30259124|gb|AAP28329.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus anthracis str. Ames]
 gi|47505072|gb|AAT33748.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181214|gb|AAT56590.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus anthracis str. Sterne]
          Length = 371

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 53/193 (27%), Gaps = 11/193 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN +  +    ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MNKLPHET-RVVIGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            +      + +    PN  V     I      
Sbjct: 58  NDVIEVCNQIGIPYYAVN---FEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWL 175
             A  LG   +  G           Y   R       +T     L  E       PL  L
Sbjct: 115 EHAIALGADYVATGHYARVAYMDGEYKMLRGVDDNKDQTYFLNQLSQEQLSKTMFPLGEL 174

Query: 176 KKYETWKLAQDIG 188
           KK +  ++A++ G
Sbjct: 175 KKPQIREMAKEAG 187


>gi|152979406|ref|YP_001345035.1| thiamine biosynthesis protein ThiI [Actinobacillus succinogenes
           130Z]
 gi|189030613|sp|A6VQ53|THII_ACTSZ RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|150841129|gb|ABR75100.1| thiamine biosynthesis/tRNA modification protein ThiI
           [Actinobacillus succinogenes 130Z]
          Length = 484

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 52/182 (28%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K   +   W   
Sbjct: 180 VLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGG-------AAHEIGVK-QMVYHLWNRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + + +        L    V     +        A R  I  
Sbjct: 232 GSSHKVRFIAINFEAVVGEILEKIDNGQMGVVLKRMMVRAAGKV--------AQRFAIEA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I      +         V  PL+   K +   +A+ IG +
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDEAAGTL---------VLRPLITHDKEQIIAMAKQIGTE 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|224025546|ref|ZP_03643912.1| hypothetical protein BACCOPRO_02286 [Bacteroides coprophilus DSM
           18228]
 gi|224018782|gb|EEF76780.1| hypothetical protein BACCOPRO_02286 [Bacteroides coprophilus DSM
           18228]
          Length = 361

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 53/190 (27%), Gaps = 10/190 (5%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR--NKVELECRLCVRKK 59
           N  ++K    LL  SGG DSS       D    V  ++F + ++      LE    + ++
Sbjct: 7   NGPMEKNNKVLLGMSGGTDSSVAAMLLQDAGYEVTGITFRFYEKDFQTEYLEDARHLCEQ 66

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +      +      +  +    + +   +  T        +           +   +   
Sbjct: 67  LGIRHLTYDAREVFEEQIIHYFIQEYM-NGRTPVPCTLCNNQLKWPLLKEIADREGIYHL 125

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           AT  Y    T        +      D         +  +            P+  L K  
Sbjct: 126 ATGHYVRKQTVNGRWFIRSGADPDKDQSFFLWGLPQDLLERA-------LFPMGELTKVR 178

Query: 180 TWKLAQDIGG 189
             ++A + G 
Sbjct: 179 VREIAAERGQ 188


>gi|115974803|ref|XP_001180974.1| PREDICTED: similar to argininosuccinate synthetase, partial
           [Strongylocentrotus purpuratus]
          Length = 693

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 45/151 (29%), Gaps = 6/151 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K    +L +SGG D+S  L W ++    V   + D GQ    + +       K   +   
Sbjct: 8   KKGKVVLAYSGGLDTSCILVWLIEEGYDVVAYTADVGQ--GDDYDAIRKKAMKCGAIDYV 65

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            KD L  D ++        +  +  K     +    L    +    I  +      A   
Sbjct: 66  VKD-LKRDFVVENIW---PAVQANAKYEDRYLLGTALARPCISKGIIEVVKEHNAQAVSH 121

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETA 157
           G T         + S Y       I A    
Sbjct: 122 GATGKGNDQVRFELSCYALHPSIEIIAPWKM 152


>gi|115630519|ref|XP_789011.2| PREDICTED: similar to argininosuccinate synthetase, partial
           [Strongylocentrotus purpuratus]
          Length = 690

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 45/151 (29%), Gaps = 6/151 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K    +L +SGG D+S  L W ++    V   + D GQ    + +       K   +   
Sbjct: 8   KKGKVVLAYSGGLDTSCILVWLIEEGYDVVAYTADVGQ--GDDYDAIRKKAMKCGAIDYV 65

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            KD L  D ++        +  +  K     +    L    +    I  +      A   
Sbjct: 66  VKD-LKRDFVVENIW---PAVQANAKYEDRYLLGTALARPCISKGIIEVVKEHNAQAVSH 121

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETA 157
           G T         + S Y       I A    
Sbjct: 122 GATGKGNDQVRFELSCYALHPSIEIIAPWKM 152


>gi|15643286|ref|NP_228330.1| tRNA-specific 2-thiouridylase MnmA [Thermotoga maritima MSB8]
 gi|8134745|sp|Q9WYZ0|MNMA_THEMA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|4981033|gb|AAD35605.1|AE001728_6 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermotoga maritima MSB8]
          Length = 358

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/190 (10%), Positives = 41/190 (21%), Gaps = 20/190 (10%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR--------------NKVELECRLCVRK 58
           +  SGG DS+  L   L     V+       +               +  +    + +  
Sbjct: 5   VALSGGVDSAVALYLLLKEGHEVKAFHMKTKEDEFFIKKEIKKKVCCSPSDTADAMRIAH 64

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
            +   +            +      D+                N    F    + +    
Sbjct: 65  FLGVEIEIVDVKEIFREKVIEPFKRDLLKG----LTPNPCAHCNRFVKFGYLMDYVLNQG 120

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
               A       I                    ++   A          +    ++  K 
Sbjct: 121 FDAFASGHYAR-IEFSEKYGRKVIKKGVDLKKDQSYFLARIEPWRIERLIFPNGIY-TKE 178

Query: 179 ETWKLAQDIG 188
           E  K+A++ G
Sbjct: 179 EIRKIAEEAG 188


>gi|320449214|ref|YP_004201310.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermus scotoductus SA-01]
 gi|320149383|gb|ADW20761.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermus scotoductus SA-01]
          Length = 372

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 47/193 (24%), Gaps = 14/193 (7%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ----------RNKVELECRLCVRK 58
           P  L+  SGG DSS       +    V      +             +K       C  +
Sbjct: 2   PKVLVAMSGGVDSSVSAYLLKEAGYEVVGAMMRFWPEEPPRPTLDIPHKGRAWESCCTPE 61

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
              E     +      ++L      +     + +           PN        +    
Sbjct: 62  AAYEARRVAEILDIPFYLLD---YRETFEEEIIQPFLKDYAQGRTPNPCARCNTFVKFGA 118

Query: 119 AATLAYRLGITNIVIGVC-ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
               A RLG+  +  G     +                       E+   +  P+  + K
Sbjct: 119 LLKQAQRLGLDYVATGHYVRREGESLLRGIDPLKDQSYFLWGTPKEALPHLLFPVGGMTK 178

Query: 178 YETWKLAQDIGGQ 190
            E   LA+  G  
Sbjct: 179 AEVRALAERAGLP 191


>gi|257051513|ref|YP_003129346.1| GMP synthase subunit B [Halorhabdus utahensis DSM 12940]
 gi|256690276|gb|ACV10613.1| GMP synthase, large subunit [Halorhabdus utahensis DSM 12940]
          Length = 305

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 59/186 (31%), Gaps = 28/186 (15%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A++  SGG DSST  + A D   D++  +  D G   K E            E + +  
Sbjct: 23  KAVIALSGGVDSSTAAALAYDAIGDQLTPVYVDTGLMRKGET-----------EQIRETF 71

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D +    I+            +T     +                  +    T+A  +  
Sbjct: 72  DYMDSLRIVDATDRFLDELEGVTDPEEKRHAIGEQF-----------IREFETVAREVDA 120

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-VHTPLMWLKKYETWKLAQDI 187
             +V                 TI++      L        +  P+  L K E  ++A+++
Sbjct: 121 DYLVQ----GTIYPDRIESEGTIKSHHNVGGLPDVVDFDGIVEPMRDLYKDEVREVAREL 176

Query: 188 GGQDLV 193
             ++++
Sbjct: 177 DLEEII 182


>gi|89891099|ref|ZP_01202607.1| argininosuccinate synthase [Flavobacteria bacterium BBFL7]
 gi|89516743|gb|EAS19402.1| argininosuccinate synthase [Flavobacteria bacterium BBFL7]
          Length = 398

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 48/185 (25%), Gaps = 16/185 (8%)

Query: 5   IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE- 62
           +      ++ +SGG D S   +  + D    V  +  + G   + +L+       K+   
Sbjct: 1   MNNNKKLVIAYSGGLDTSYCAVYLSQDLGYEVHAVCVNTGGFTQEDLKTIESNAYKMGVS 60

Query: 63  -LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                   S   D ++   I G++               NN     V    I+  +    
Sbjct: 61  TFKAIDAVSTFYDKVVKYLIYGNVL-------------KNNTYPLSVSAERIVQAIEIIE 107

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            A  +    I  G                  A    I   +          +   K    
Sbjct: 108 YAKTIDAQFIAHGSTGAGNDQVRFDMIFQTLAPHIEIITPIRDGKLSRKQEIDYLKENGI 167

Query: 182 KLAQD 186
            ++ +
Sbjct: 168 AMSWE 172


>gi|65321763|ref|ZP_00394722.1| COG0482: Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase, contains the PP-loop ATPase domain
           [Bacillus anthracis str. A2012]
          Length = 376

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 54/194 (27%), Gaps = 13/194 (6%)

Query: 3   DIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           D++ K P     ++  SGG DSS       ++   V  +             C     + 
Sbjct: 4   DMMNKLPHETRVVIGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVC--TATED 61

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
             +++          + +            +      + +    PN  V     I     
Sbjct: 62  YNDVIEVCNQIGIPYYAVN---FEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAF 118

Query: 120 ATLAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
              A  LG   +  G           Y   R       +T     L  E       PL  
Sbjct: 119 LEHAIALGADYVATGHYARVAYMDGEYKMLRGVDDNKDQTYFLNQLSQEQLSKTMFPLGE 178

Query: 175 LKKYETWKLAQDIG 188
           LKK +  ++A++ G
Sbjct: 179 LKKPQIREMAKEAG 192


>gi|320160878|ref|YP_004174102.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Anaerolinea thermophila UNI-1]
 gi|319994731|dbj|BAJ63502.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Anaerolinea thermophila UNI-1]
          Length = 361

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 48/196 (24%), Gaps = 9/196 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +  + ++  SGG DSS   +  +++  RV  +          E + R C    +      
Sbjct: 4   RDETVVVAMSGGVDSSVAAALLVEQGYRVIGMMLRLWSEEGKEDQNRCCTPDAMALARRV 63

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   + + +    +     +  +          PN  +     I        A  L
Sbjct: 64  AAKLGIPFYAVDV---REKFKEVVVSHFLEGYASGITPNPCLKCNRYIRWGVLHEYAQSL 120

Query: 127 GITNIVIGVCETDYSGYPDCRH------DTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           G T    G                               L  E       P+    K E 
Sbjct: 121 GATWFATGHYARLRRLESGEVQLLRGVDVEKDQSYVLSVLPQEQLRHTFFPVGEYHKPEV 180

Query: 181 WKLAQDIGGQDLVNLI 196
            +LA+  G        
Sbjct: 181 RELARRFGLPVANRAD 196


>gi|262196644|ref|YP_003267853.1| GMP synthase, large subunit [Haliangium ochraceum DSM 14365]
 gi|262079991|gb|ACY15960.1| GMP synthase, large subunit [Haliangium ochraceum DSM 14365]
          Length = 525

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 48/183 (26%), Gaps = 20/183 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS   +       DR+  +  D G     E E    V +          
Sbjct: 230 RVICALSGGVDSSVVAALLHKAIGDRLTCIFVDNGLLRAGERETVASVFR---------D 280

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + H++          + +T                + GR  I +    +       
Sbjct: 281 HFRIDLHVIDAEQRFLDRLADITDPE---------HKRKLIGREFIAVFEEESQHIENAA 331

Query: 129 T-NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    +   S         I++      L     + +  PL  L K E   L  ++
Sbjct: 332 YLAQGTLYPDVIESVSFKGPSAVIKSHHNVGGLPERMKLKLIEPLRELFKDEVRVLGAEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|254428409|ref|ZP_05042116.1| tRNA methyl transferase [Alcanivorax sp. DG881]
 gi|196194578|gb|EDX89537.1| tRNA methyl transferase [Alcanivorax sp. DG881]
          Length = 361

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 59/185 (31%), Gaps = 4/185 (2%)

Query: 1   MNDIIKKAPS-ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ---RNKVELECRLCV 56
           M +  +     A+ L SGG DS   +    ++   VE ++F  G     +   +  +   
Sbjct: 1   MTEASQPIKRRAIALVSGGLDSMLAVKVMQEQGIEVEGVNFYTGFCVEGHTHAIRKKDKD 60

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
           ++K    +   +    + HI+ ++        +        +        F+  +  + +
Sbjct: 61  KEKRNNALWVAEQLGIKMHIIDISEEYKDVVLNPKHGYGANLNPCLDCKIFMVNQATLMI 120

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
             A  LA   G   IV G                I + E+  +  +   +        L 
Sbjct: 121 NKARELAGDRGFDFIVTGEVIGQRPKSQRKETMPIISQESGADDRLLRPLCAQNLPPTLP 180

Query: 177 KYETW 181
           + E W
Sbjct: 181 EREGW 185


>gi|158299176|ref|XP_319294.4| AGAP010139-PA [Anopheles gambiae str. PEST]
 gi|157014240|gb|EAA13830.4| AGAP010139-PA [Anopheles gambiae str. PEST]
          Length = 679

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 52/194 (26%), Gaps = 8/194 (4%)

Query: 8   APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVE--- 62
               LLL SGG DS+ C +      + D+V  +  D G     E        +++     
Sbjct: 230 NSKVLLLVSGGVDSTVCAALLRHALKPDQVIAVHIDNGFMRLNESANVEKSLRELGVDLF 289

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +       +     + L        + +            +        +   L      
Sbjct: 290 VKNAIYKFMKGTTTIKLPGSLYNQDTQMLCQTISPEDKRKIIGDVFVKVSNDVLREMNLN 349

Query: 123 AYRLG-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYE 179
           A  +      +        S     + DTI+       L  +      V  PL    K E
Sbjct: 350 ADEVYLAQGTLRPDLIESASTLVSAKADTIKTHHNDTELIRKLREAGRVIEPLRDFHKDE 409

Query: 180 TWKLAQDIGGQDLV 193
             +L   +G    +
Sbjct: 410 VRQLGYSLGLPAHL 423


>gi|15669834|ref|NP_248648.1| hypothetical protein MJ_1638 [Methanocaldococcus jannaschii DSM
           2661]
 gi|38503296|sp|Q59032|Y1638_METJA RecName: Full=Uncharacterized protein MJ1638
 gi|1500538|gb|AAB99659.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 260

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 2/70 (2%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-RNKVELECRLCVRKKIVEL 63
           I K P A++ FSGG DSST    A  +   V+ +S            E    + KKI   
Sbjct: 59  IDKKPKAVVAFSGGVDSSTSAIIA-KQIFDVKAVSCYSKYIMTDEMRENAKNIAKKIGIS 117

Query: 64  MPKWKDSLGE 73
           +      L E
Sbjct: 118 LEFVSIDLEE 127


>gi|57242597|ref|ZP_00370534.1| argininosuccinate synthase [Campylobacter upsaliensis RM3195]
 gi|57016526|gb|EAL53310.1| argininosuccinate synthase [Campylobacter upsaliensis RM3195]
          Length = 406

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 4/80 (5%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCV---RKK 59
          +  K   A+L +SGG D+S  L W  D     V T + D GQ  ++E      +    K+
Sbjct: 1  MKDKVKKAVLAYSGGLDTSIILKWLQDEYGCEVVTFTADIGQGEELEPARLKALSLGIKE 60

Query: 60 IVELMPKWKDSLGEDHILPL 79
              +   KD   +D++ P+
Sbjct: 61 ENIFIKDLKDEFVKDYVFPM 80


>gi|325567216|ref|ZP_08143883.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus casseliflavus ATCC 12755]
 gi|325158649|gb|EGC70795.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus casseliflavus ATCC 12755]
          Length = 372

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 46/191 (24%), Gaps = 11/191 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  +    ++  SGG DSS       ++   V  +             C     +   ++
Sbjct: 1   MSNENTRVVVGMSGGVDSSVTALLLKEQGYDVVGIFMKNWDDTDENGVC--TATEDYKDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      + +            + +    + +    PN  V     I        A
Sbjct: 59  AKVAAQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDYA 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLKK 177
             LG   +  G             H                 L  E       PL  ++K
Sbjct: 116 MDLGADYVATGHYAQVTVDENGVTHMLRGVDNNKDQTYFLSQLSQEQLSKTMFPLGGMEK 175

Query: 178 YETWKLAQDIG 188
            E   +A+  G
Sbjct: 176 SEVRAIAERAG 186


>gi|313623686|gb|EFR93838.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria innocua FSL J1-023]
          Length = 371

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/185 (11%), Positives = 48/185 (25%), Gaps = 12/185 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS       ++   V  +   ++   ++  +       + ++ +  +  
Sbjct: 9   RVVVGMSGGVDSSVTAHILKEQGYDVIGIFMKNWDDTDEFGVCTATEDYEDVIRVANQIG 68

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                     +    +      T  +             +     I        A  LG 
Sbjct: 69  IPYYA-----VNFEKEYWDKVFTYFLDEYKLGRTPNPDVMC-NKEIKFKAFLEHAESLGA 122

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +  G          +        +          L  +    V  PL  ++K E  ++
Sbjct: 123 DYVATGHYAQVKKVGDEIELLRGVDNNKDQTYFLNQLSQDQLKKVMFPLGGMEKTEVREI 182

Query: 184 AQDIG 188
           A   G
Sbjct: 183 ATKAG 187


>gi|257876279|ref|ZP_05655932.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus casseliflavus EC20]
 gi|257810445|gb|EEV39265.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus casseliflavus EC20]
          Length = 372

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 46/191 (24%), Gaps = 11/191 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  +    ++  SGG DSS       ++   V  +             C     +   ++
Sbjct: 1   MSNENTRVVVGMSGGVDSSVTALLLKEQGYDVVGIFMKNWDDTDENGVC--TATEDYKDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      + +            + +    + +    PN  V     I        A
Sbjct: 59  AKVAAQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDYA 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLKK 177
             LG   +  G             H                 L  E       PL  ++K
Sbjct: 116 MDLGADYVATGHYAQVTVDENGVTHMLRGVDNNKDQTYFLSQLSQEQLSKTMFPLGGMEK 175

Query: 178 YETWKLAQDIG 188
            E   +A+  G
Sbjct: 176 SEVRAIAERAG 186


>gi|257866681|ref|ZP_05646334.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus casseliflavus EC30]
 gi|257872802|ref|ZP_05652455.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus casseliflavus EC10]
 gi|257800639|gb|EEV29667.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus casseliflavus EC30]
 gi|257806966|gb|EEV35788.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus casseliflavus EC10]
          Length = 372

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 46/191 (24%), Gaps = 11/191 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  +    ++  SGG DSS       ++   V  +             C     +   ++
Sbjct: 1   MSNENTRVVVGMSGGVDSSVTALLLKEQGYDVVGIFMKNWDDTDENGVC--TATEDYKDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      + +            + +    + +    PN  V     I        A
Sbjct: 59  AKVAAQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDYA 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLKK 177
             LG   +  G             H                 L  E       PL  ++K
Sbjct: 116 MDLGADYVATGHYAQVTVDENGVTHMLRGVDNNKDQTYFLSQLSQEQLSKTMFPLGGMEK 175

Query: 178 YETWKLAQDIG 188
            E   +A+  G
Sbjct: 176 SEVRAIAERAG 186


>gi|242309258|ref|ZP_04808413.1| tRNA methyltransferase [Helicobacter pullorum MIT 98-5489]
 gi|239524299|gb|EEQ64165.1| tRNA methyltransferase [Helicobacter pullorum MIT 98-5489]
          Length = 325

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 31/98 (31%), Gaps = 2/98 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL LFSGG DS   +    D    V  L F+ G     + +    +++ + ++    K 
Sbjct: 2   KALALFSGGLDSLLAIKIIKDMGIDVLALHFNIGF--VGKNDKSEALKEILAQIDVPLKV 59

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF 107
                      +           N  +    N   + F
Sbjct: 60  IDIRKQFFDEVLFAPKYGYGKYFNPCIDCHGNMFSHAF 97


>gi|312898012|ref|ZP_07757421.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Megasphaera micronuciformis F0359]
 gi|310620937|gb|EFQ04488.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Megasphaera micronuciformis F0359]
          Length = 358

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 50/193 (25%), Gaps = 14/193 (7%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV----ELECRLCVRKKIVELMPKWK 68
           +  SGG DSS       ++   V  ++    +              C    + +      
Sbjct: 7   VAMSGGVDSSVTAGLLKEQGYEVIGITLRLWEEEPACKVERNIHACCSLDSVNDAKAVAD 66

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 + L      D+    +             PN  +     I        A + G 
Sbjct: 67  VLGIRHYTLD---FRDVFRHDVIDYFIDSYAHGKTPNPCIACNRFIKFGLLWDQAQQFGA 123

Query: 129 TNI-------VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
             +       ++   E         + +          L  +    +  P+  L+K +T 
Sbjct: 124 DLLATGHYARIVYDNERKIYTLRRGKDERKDQSYVLYQLTQDLLKHIIFPMADLEKTKTR 183

Query: 182 KLAQDIGGQDLVN 194
           +LA++ G      
Sbjct: 184 ELAKEWGLPVFNK 196


>gi|304407559|ref|ZP_07389211.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Paenibacillus curdlanolyticus YK9]
 gi|304343510|gb|EFM09352.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Paenibacillus curdlanolyticus YK9]
          Length = 376

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/190 (11%), Positives = 43/190 (22%), Gaps = 13/190 (6%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELM 64
           K     ++  SGG DSS            V  +   ++   ++          + +  + 
Sbjct: 5   KAETRVVVGMSGGVDSSVTALLLKQEGYDVIGIFMKNWDDTDEFGHCTAEEDAEDVRRVC 64

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            +            +           T  +    +        +  R  I        A 
Sbjct: 65  DQIGIPYYT-----VNFEQQYFDKVFTYFLDEYKRGRTPNPDVMCNRE-IKFGEFLQKAI 118

Query: 125 RLGITNIVIGVCETDYSGYPDCR------HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            LG   +  G                               L          P+  L K 
Sbjct: 119 DLGADYLATGHYARVERTANGETKLLRGVDSNKDQTYFLHQLDQSQLAKAMFPIGDLPKP 178

Query: 179 ETWKLAQDIG 188
           E  ++A++ G
Sbjct: 179 EVRRIAEEAG 188


>gi|157869227|ref|XP_001683165.1| GMP synthase; glutamine amidotransferase [Leishmania major strain
           Friedlin]
 gi|68224049|emb|CAJ03818.1| putative GMP synthase [Leishmania major strain Friedlin]
          Length = 656

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 50/200 (25%), Gaps = 8/200 (4%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKK 59
            +        L L SGG DS+ C    L     +RV  +  D+G     E    +     
Sbjct: 216 RERTSGGQKVLCLASGGVDSTVCAVLLLKALGPERVVCIHIDHGFMRLNESVQAVEALNA 275

Query: 60  IVELMPKWK---DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
               +   K   D       +          ++  + V    +  N+            +
Sbjct: 276 AGVRVHLVKAQEDFAQASTEMTAKGSRAAYTTNKLREVTDPEEKRNIIGNTFMTVCDRVI 335

Query: 117 VFAATLAYR-LGITNIVIGVCETDYSGYPDCRHDTIRAIETA--INLGMESHVTVHTPLM 173
                     L     +        S Y       I+       +   +     +  PL 
Sbjct: 336 KELQLDVENLLLAQGTLRPDLIESGSKYASVNAAAIKTHHNDTAVVRLLRDAGRIIEPLC 395

Query: 174 WLKKYETWKLAQDIGGQDLV 193
              K E  +L   +G    +
Sbjct: 396 DYHKDEVRELGARLGIPCRL 415


>gi|294630984|ref|ZP_06709544.1| GMP synthase [Streptomyces sp. e14]
 gi|292834317|gb|EFF92666.1| GMP synthase [Streptomyces sp. e14]
          Length = 526

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 54/186 (29%), Gaps = 14/186 (7%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             A+   SGG DS+   +        ++  +  D+G   K E E    V K  V      
Sbjct: 225 KRAICGLSGGVDSAVAAALVQKAIGSQLTCVYVDHGLMRKGETE---QVEKDFVAATGVQ 281

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +    L  L  +       +   K +        V  +    ++     A    
Sbjct: 282 LKVVDAEKRF-LDALKGV------SDPEEKRKIIGREFIRVFEQAQAEIIADEGPAVE-- 332

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   +               I++      L  +    +  PL  L K E   + Q++
Sbjct: 333 -FLVQGTLYPDVVESGGGTGAANIKSHHNVGGLPEDLEFKLIEPLRKLFKDEVRMVGQEL 391

Query: 188 GGQDLV 193
           G  + +
Sbjct: 392 GLPEEI 397


>gi|84685759|ref|ZP_01013655.1| argininosuccinate synthase [Maritimibacter alkaliphilus HTCC2654]
 gi|84665852|gb|EAQ12326.1| argininosuccinate synthase [Rhodobacterales bacterium HTCC2654]
          Length = 408

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 47/157 (29%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W   +    V T + D GQ  ++E      +   I   
Sbjct: 1   MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEPAREKAIMLGI--- 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +    +    + T      +   ++    +  R +         A
Sbjct: 58  -KPENIYIEDLREAFVRDYVNPMFRANTVYEGQYLLGTSIARPLISKRLVEIAEETGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         + + Y    +  + A     +L
Sbjct: 117 VAHGATGKGNDQVRFELACYALNPNIKVIAPWRLWDL 153


>gi|323498632|ref|ZP_08103624.1| tRNA s(4)U8 sulfurtransferase [Vibrio sinaloensis DSM 21326]
 gi|323316330|gb|EGA69349.1| tRNA s(4)U8 sulfurtransferase [Vibrio sinaloensis DSM 21326]
          Length = 482

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  +V    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGP-------AHEI--GVKQVSHYLWNK 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G       +       S   + V  +I +             +F+  A  +A +  I  
Sbjct: 231 YG-------SSAKVRFISVDFEPVVAEILEKVDDGQMGVILKRMFMRAAGMVASKFKIEA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      S         I  +   +         +  PL+   K +   LA+DIG +
Sbjct: 284 LVTGEALGQVSSQTLTNLRHIDNVTDTL---------ILRPLINWDKEDIINLARDIGTE 334

Query: 191 DL 192
           D 
Sbjct: 335 DF 336


>gi|294654541|ref|XP_456602.2| DEHA2A06402p [Debaryomyces hansenii CBS767]
 gi|199428964|emb|CAG84558.2| DEHA2A06402p [Debaryomyces hansenii]
          Length = 502

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 55/203 (27%), Gaps = 18/203 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWA--LDRFDR----VETLSFDYGQRNKVELECRLCVRKKIV 61
               ++  SGG DS           R  +    +  ++ D+  R     E      +K+ 
Sbjct: 21  PERIVVALSGGVDSLCLTYLLGQFKRIYKPSLQITAITIDHKYRAGSGKE-----AEKVG 75

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
            L+  W    G  HI+      D     +T    +  +        V     +  +  A 
Sbjct: 76  VLVRPW----GVKHIVKTLEYEDRDIGKITNFEEVAREKRYDIFEQVCRELDVKSLIVAH 131

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
                  T +      +   G    R      I           + V  PL+   K E  
Sbjct: 132 NLNDQIETFLQRLQQNSSIFGLVGLRTVDHLPISPTSPSENGDSIHVVRPLLSFDKSEII 191

Query: 182 KLAQDIGG---QDLVNLILEESH 201
           +     G    +D  N  +  + 
Sbjct: 192 ETCTKNGIRWFEDHTNSDIHLTR 214


>gi|254429426|ref|ZP_05043133.1| argininosuccinate synthase [Alcanivorax sp. DG881]
 gi|196195595|gb|EDX90554.1| argininosuccinate synthase [Alcanivorax sp. DG881]
          Length = 407

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 52/174 (29%), Gaps = 9/174 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + K    +L +SGG D+S  + W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MSKINKVVLAYSGGLDTSVIVKWLQDTYDCEVVTFTADIGQGEEVEPARAKAEAMGVKEI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                ++    D++ P+     I         ++           +  R +         
Sbjct: 61  YIEDLREEFVRDYVFPMFRANAIYEGEYLLGTSIARP-------LIAKRLVEIAEETGAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
           A   G T         +   Y       + A     +L     +  +     + 
Sbjct: 114 AISHGATGKGNDQVRFELGAYALAPGIQVIAPWREWDLNSREKLMAYCEERNIP 167


>gi|119608339|gb|EAW87933.1| argininosuccinate synthetase, isoform CRA_b [Homo sapiens]
          Length = 450

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 22/51 (43%)

Query: 2  NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
           D +    S +L +SGG D+S  L W  ++   V     + GQ+   E   
Sbjct: 36 RDAMSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 86


>gi|110833586|ref|YP_692445.1| argininosuccinate synthase [Alcanivorax borkumensis SK2]
 gi|119361256|sp|Q0VRM5|ASSY_ALCBS RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|110646697|emb|CAL16173.1| argininosuccinate synthase [Alcanivorax borkumensis SK2]
          Length = 407

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 52/174 (29%), Gaps = 9/174 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + K    +L +SGG D+S  + W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MSKINKVVLAYSGGLDTSVIVKWLQDTYDCEVVTFTADIGQGEEVEPARAKAEAMGVKEI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                ++    D++ P+     I         ++           +  R +         
Sbjct: 61  YIEDLREEFVRDYVFPMFRANAIYEGEYLLGTSIARP-------LIAKRLVEIAEETGAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
           A   G T         +   Y       + A     +L     +  +     + 
Sbjct: 114 AISHGATGKGNDQVRFELGAYALAPGIQVIAPWREWDLNSREKLMAYCEERNIP 167


>gi|60683221|ref|YP_213365.1| tRNA-specific 2-thiouridylase MnmA [Bacteroides fragilis NCTC 9343]
 gi|81313727|sp|Q5L8X6|MNMA3_BACFN RecName: Full=tRNA-specific 2-thiouridylase mnmA 3
 gi|60494655|emb|CAH09456.1| putative tRNA methyltransferase [Bacteroides fragilis NCTC 9343]
 gi|301164740|emb|CBW24299.1| putative tRNA methyltransferase [Bacteroides fragilis 638R]
          Length = 362

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/192 (10%), Positives = 53/192 (27%), Gaps = 21/192 (10%)

Query: 5   IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +K++   +L+  SGG DS+       ++   +  ++         E +    +  ++   
Sbjct: 1   MKESKKRVLVGMSGGIDSTATCLMLQEQGYEIVGVTMRVWGD---EPQDARELAARMGIE 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                + +     +    +              + +    PN  V    +         A
Sbjct: 58  HYVADERVPFKDTIVKNFI-------------DEYRQGRTPNPCVMCNPLFKFRMLIEWA 104

Query: 124 YRLGITNI----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            +LG   I       + E +   Y     D  +     +    +  +      +     +
Sbjct: 105 DKLGCDWIATGHYSRLEERNGHIYIVAGDDDKKDQSYFLWRLGQDVLRRCIFPLGNYTKQ 164

Query: 180 TWKLAQDIGGQD 191
           T +      G +
Sbjct: 165 TVRDYLREKGYE 176


>gi|150391390|ref|YP_001321439.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Alkaliphilus metalliredigens QYMF]
 gi|205811141|sp|A6TUB2|MNMA_ALKMQ RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|149951252|gb|ABR49780.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Alkaliphilus metalliredigens QYMF]
          Length = 369

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 49/189 (25%), Gaps = 13/189 (6%)

Query: 5   IKKAPS---ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           +KK P     ++  SGG DSS       ++   V  +             C     +   
Sbjct: 1   MKKDPKDTKVVIGMSGGVDSSVAALKLKEQGYDVIGIFMKNWDEPDEYGYC--TAAEDYE 58

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           ++    +      + +            + +    + +    PN  V     I       
Sbjct: 59  DVRRVCEQIGIPYYTVN---FEKEYWEKVFQYFLDEYKKGRTPNPDVMCNKEIKFKAFLE 115

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLK 176
            A +LG   +  G          + R                 LG         P+  + 
Sbjct: 116 HALKLGADYLATGHYAQVDYKDGEYRLLRGVDSNKDQTYFLNTLGQYQLSKAMFPIGHID 175

Query: 177 KYETWKLAQ 185
           K +  ++A 
Sbjct: 176 KKKVREMAL 184


>gi|255733074|ref|XP_002551460.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
 gi|240131201|gb|EER30762.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
          Length = 503

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/198 (11%), Positives = 46/198 (23%), Gaps = 18/198 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFD-----RVETLSFDYGQRNKVELECRLCVRKKIV 61
                 +  SGG DS        ++        +  ++ D+  R+    E      KK+ 
Sbjct: 20  MPSKVAVALSGGPDSMLLTWLLQNQKRQMKNLDIYAITIDHKYRSGSHEE-----AKKV- 73

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
               +W       HI+      D        N     ++                V    
Sbjct: 74  ---HQWIKDWDVLHIIKSLEYKDNIDPKKLTNFEEVAREERYRVMSQICFKESIPVLFMG 130

Query: 122 LAYRLG----ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                     I  +         +G             +      +  + +  P +   K
Sbjct: 131 HHRDDQLETFIQRLQGNSSIFGLAGTRSVSPVPTSKDLSPNETQDKLQIQIARPFLEFDK 190

Query: 178 YETWKLAQDIGGQDLVNL 195
            +  +     G   + +L
Sbjct: 191 KDILETCNANGIHYVTDL 208


>gi|260942363|ref|XP_002615480.1| hypothetical protein CLUG_04362 [Clavispora lusitaniae ATCC 42720]
 gi|238850770|gb|EEQ40234.1| hypothetical protein CLUG_04362 [Clavispora lusitaniae ATCC 42720]
          Length = 416

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 39/135 (28%), Gaps = 16/135 (11%)

Query: 5   IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + K    + L +SGG D+S  L+W L++   V     + GQ  + + E        I   
Sbjct: 1   MSKGK--VCLAYSGGLDTSVILAWLLEQGYEVVAFLANIGQ--EEDFEAAEKKALAIGA- 55

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                        + + +      +     +       N+          +       +A
Sbjct: 56  ----------TKFVVVDVRKQFVENVCFPAIQSNAIYENVYLLGTSLARPVIAQAQIQVA 105

Query: 124 YRLGITNIVIGVCET 138
            + G   +  G    
Sbjct: 106 EQEGCFAVSHGCTGK 120


>gi|229098868|ref|ZP_04229804.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus Rock3-29]
 gi|229105030|ref|ZP_04235684.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus Rock3-28]
 gi|229117893|ref|ZP_04247255.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus Rock1-3]
 gi|228665550|gb|EEL21030.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus Rock1-3]
 gi|228678407|gb|EEL32630.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus Rock3-28]
 gi|228684541|gb|EEL38483.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus Rock3-29]
          Length = 376

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 53/194 (27%), Gaps = 13/194 (6%)

Query: 3   DIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           D++ K P     ++  SGG DSS       ++   V  +             C     + 
Sbjct: 4   DMMNKLPHETRVVIGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVC--TATED 61

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
             +++          + +            +      + +    PN  V     I     
Sbjct: 62  YNDVIEVCNQIGIPYYAVN---FEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAF 118

Query: 120 ATLAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
              A  LG   +  G           Y   R       +T     L  E       PL  
Sbjct: 119 LEHAIALGADYVATGHYARVAYMDGEYKMLRGVDDNKDQTYFLNQLSQEQLSKTMFPLGE 178

Query: 175 LKKYETWKLAQDIG 188
           LKK +  ++A + G
Sbjct: 179 LKKPQIREMATEAG 192


>gi|209523582|ref|ZP_03272136.1| GMP synthase, large subunit [Arthrospira maxima CS-328]
 gi|209495987|gb|EDZ96288.1| GMP synthase, large subunit [Arthrospira maxima CS-328]
          Length = 541

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 53/186 (28%), Gaps = 11/186 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST          D++  +  D G   K E E    + K         
Sbjct: 238 KRVLLALSGGVDSSTLAFLLHQAIGDQLTCMFIDQGFMRKYEPE---KLVKLFDARFHIS 294

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            + +         + G         +   K +        V       L     LA    
Sbjct: 295 VEYVNARDRFLEKLKG-------VTDPEEKRKRIGAEFIQVFEEESARLGPFDYLAQGTL 347

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +++            +     I++      L  +    +  PL  L K E  K+ + I
Sbjct: 348 YPDVIESADTNVDPKTGERVAVKIKSHHNVGGLPKDLRFKLVEPLRKLFKDEVRKVGRSI 407

Query: 188 GGQDLV 193
           G  + +
Sbjct: 408 GLPEEI 413


>gi|310643522|ref|YP_003948280.1| tRNA-specific 2-thiouridylase mnma [Paenibacillus polymyxa SC2]
 gi|309248472|gb|ADO58039.1| tRNA-specific 2-thiouridylase mnmA [Paenibacillus polymyxa SC2]
          Length = 373

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/196 (10%), Positives = 45/196 (22%), Gaps = 13/196 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKK 59
           M     +    ++  SGG DSS       ++   V  +   ++   ++          + 
Sbjct: 1   MAKANHET-RVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDEFGRCTAEEDAED 59

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +  +  +            +    +      +  +             +  R  I     
Sbjct: 60  VRRVCEQIDIPYYT-----VNFEKEYFDKVFSYFLDEYKAGRTPNPDVMCNRE-IKFGEF 113

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMW 174
              A  LG   +  G                              L          P+  
Sbjct: 114 LNKALDLGADYVATGHYARVVEEDGRFTLLRGVDSNKDQTYFLNALSQAQLSRTMFPIGH 173

Query: 175 LKKYETWKLAQDIGGQ 190
           L K E  ++A+  G  
Sbjct: 174 LPKPEVRRIAEAAGLY 189


>gi|282859363|ref|ZP_06268471.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Prevotella bivia JCVIHMP010]
 gi|282587848|gb|EFB93045.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Prevotella bivia JCVIHMP010]
          Length = 514

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 60/188 (31%), Gaps = 21/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS C +         +  +  D+G   K E E  +   K +      
Sbjct: 213 NDRVILGLSGGVDSSVCATLLNKAIGKNLTCIFVDHGMLRKNEFEKVMEAYKGLG----- 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                       L ++G  +     K++      +      + GR+ + +  A       
Sbjct: 268 ------------LNVIGVDASEKFFKDLEGVT--DPEQKRKIIGRDFVEVFNAEAKKIT- 312

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G    D           I++      L  E H+ +  PL WL K E  ++   
Sbjct: 313 DAKWLAQGTIYPDRIESLSITGMVIKSHHNVGGLPEEMHLQLCEPLQWLFKDEVRRVGYS 372

Query: 187 IGGQDLVN 194
           +G  + + 
Sbjct: 373 MGMPERLI 380


>gi|320009022|gb|ADW03872.1| GMP synthase, large subunit [Streptomyces flavogriseus ATCC 33331]
          Length = 528

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 52/186 (27%), Gaps = 14/186 (7%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             A+   SGG DS+   +        ++  +  D+G   K E E        +     K 
Sbjct: 227 KRAICGLSGGVDSAVAAALVQKAIGSQLTCVYVDHGLMRKGETEQVEK--DFVAATGAKL 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           K    E   L           +   +   K +        V  +  + ++          
Sbjct: 285 KVVDAEKRFLDAL--------AGVSDPEQKRKIIGREFIRVFEQAQLEILQEEGPEV--- 333

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   +               I++      L  +    +  PL  L K E   + Q++
Sbjct: 334 AFLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPDDIEFELVEPLRQLFKDEVRMVGQEL 393

Query: 188 GGQDLV 193
           G  + +
Sbjct: 394 GLPEEI 399


>gi|165872748|ref|ZP_02217376.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus anthracis str. A0488]
 gi|167636496|ref|ZP_02394793.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus anthracis str. A0442]
 gi|167638584|ref|ZP_02396860.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus anthracis str. A0193]
 gi|170689637|ref|ZP_02880819.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus anthracis str. A0465]
 gi|170709396|ref|ZP_02899807.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus anthracis str. A0389]
 gi|177653267|ref|ZP_02935519.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus anthracis str. A0174]
 gi|190566853|ref|ZP_03019769.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus anthracis Tsiankovskii-I]
 gi|227817175|ref|YP_002817184.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus anthracis str. CDC 684]
 gi|229601635|ref|YP_002868683.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus anthracis str. A0248]
 gi|164711524|gb|EDR17073.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus anthracis str. A0488]
 gi|167513432|gb|EDR88802.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus anthracis str. A0193]
 gi|167528089|gb|EDR90886.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus anthracis str. A0442]
 gi|170125695|gb|EDS94611.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus anthracis str. A0389]
 gi|170666407|gb|EDT17188.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus anthracis str. A0465]
 gi|172081549|gb|EDT66621.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus anthracis str. A0174]
 gi|190561844|gb|EDV15813.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus anthracis Tsiankovskii-I]
 gi|227004048|gb|ACP13791.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus anthracis str. CDC 684]
 gi|229266043|gb|ACQ47680.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus anthracis str. A0248]
          Length = 372

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 53/193 (27%), Gaps = 11/193 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN +  +    ++  SGG DSS       ++   V  +             C     +  
Sbjct: 2   MNKLPHET-RVVIGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            +      + +    PN  V     I      
Sbjct: 59  NDVIEVCNQIGIPYYAVN---FEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAFL 115

Query: 121 TLAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWL 175
             A  LG   +  G           Y   R       +T     L  E       PL  L
Sbjct: 116 EHAIALGADYVATGHYARVAYMDGEYKMLRGVDDNKDQTYFLNQLSQEQLSKTMFPLGEL 175

Query: 176 KKYETWKLAQDIG 188
           KK +  ++A++ G
Sbjct: 176 KKPQIREMAKEAG 188


>gi|326794627|ref|YP_004312447.1| tRNA-specific 2-thiouridylase mnmA [Marinomonas mediterranea MMB-1]
 gi|326545391|gb|ADZ90611.1| tRNA-specific 2-thiouridylase mnmA [Marinomonas mediterranea MMB-1]
          Length = 371

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 49/196 (25%), Gaps = 15/196 (7%)

Query: 1   MNDIIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           MN   + +    ++  SGG DSS      + +  +VE L       +     C    ++ 
Sbjct: 1   MNSSEQNSNTKVIVGMSGGVDSSVSALLLMQQGYQVEGLFMKNWDEDDGTEYC--TAKED 58

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           + +          + H    A        ++ ++   + +    PN  +     I     
Sbjct: 59  LADAQAVCDKLGIKLHT---ANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNKEIKFKAF 115

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
              A  L    I  G                               V          K E
Sbjct: 116 LEYAMALKADYIATGHYVRKGFDENGNALLLKGLDNNKDQSYFLYAVG---------KGE 166

Query: 180 TWKLAQDIGGQDLVNL 195
             K    +G  +   +
Sbjct: 167 IAKTFFPVGELEKPEV 182


>gi|321460868|gb|EFX71906.1| hypothetical protein DAPPUDRAFT_308688 [Daphnia pulex]
          Length = 686

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 59/193 (30%), Gaps = 6/193 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSW---ALDRFD---RVETLSFDYGQRNKVELECRLCVRKKI 60
           +    L+L SGG DS+ C +    AL + D   RV+ +  D G   K E E  +   +++
Sbjct: 232 RDKIVLMLVSGGVDSAVCAALLHKALQQGDDSSRVQAIHIDNGFLRKDESEQVVTSLQQL 291

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
              +   K SL                   T N   K +        V  R    L    
Sbjct: 292 GLNLRVVKASLTFYDASTNVHGRQTLSLCRTVNPEEKRRIIGDTFVKVADRTANDLNLTW 351

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
                   T     +    +              ++ +   +  H  V  PL    K E 
Sbjct: 352 DNLLLGQGTLRPDLIESASHMASSRADAIKTHHNDSEMVRQLRHHGRVVEPLKDFHKDEV 411

Query: 181 WKLAQDIGGQDLV 193
             L +++G    +
Sbjct: 412 RALGRELGLPAEL 424


>gi|322391188|ref|ZP_08064660.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus peroris ATCC 700780]
 gi|321145941|gb|EFX41330.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus peroris ATCC 700780]
          Length = 453

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 51/194 (26%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 81  MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 136

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 137 KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 193

Query: 121 TLAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 194 DYAMTLGADYVATGHYARVARDEDGIVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 253

Query: 175 LKKYETWKLAQDIG 188
           L+K E  K+A++ G
Sbjct: 254 LEKPEVRKIAEEAG 267


>gi|312115903|ref|YP_004013499.1| argininosuccinate synthase [Rhodomicrobium vannielii ATCC 17100]
 gi|311221032|gb|ADP72400.1| argininosuccinate synthase [Rhodomicrobium vannielii ATCC 17100]
          Length = 409

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 61/207 (29%), Gaps = 14/207 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           M+D  K     +L +SGG D+S  L W        V T + D GQ  ++E        + 
Sbjct: 1   MSDK-KSIKKVVLAYSGGLDTSIILKWLQVTYGCEVVTFTADLGQGEELEP--ARRKAEL 57

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +  +   + + L E+ +            +      + +   ++    +  R I      
Sbjct: 58  LG-IQQIYIEDLREEFVRDYVF---PMFRANAVYEGIYLLGTSIARPLIAKRQIEIAHET 113

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
              A   G T         + S Y    + T+ A     +    + +          K +
Sbjct: 114 GADAVCHGATGKGNDQVRFELSYYALDPNITVVAPWREWDFKSRTALIDFAE-----KNQ 168

Query: 180 TWKLAQDIGGQDLVNLILEESHTCYLG 206
                   G      +     HT   G
Sbjct: 169 ILVTKDKRGDAPFS-VDANLLHTSSEG 194


>gi|330718658|ref|ZP_08313258.1| argininosuccinate synthase [Leuconostoc fallax KCTC 3537]
          Length = 417

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/201 (11%), Positives = 58/201 (28%), Gaps = 22/201 (10%)

Query: 1   MNDI--IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           M ++         +L +SGG D+S  + W  ++   V  +  D GQ +  +++       
Sbjct: 1   MTEMRLNIMTEKLVLAYSGGLDTSVAIPWLKEKGYDVIAVVLDVGQ-HGKDMQMIQEKAL 59

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
            +  +            ++   +     + +      M  +      +         L  
Sbjct: 60  TVGAIQSI---------VIDAKLEFADQYVAPVIKANMLYEGEYPMVSA--------LSR 102

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
              +   + I +          S           A   A++  M+    +     W ++ 
Sbjct: 103 PLIIKKLVDIAHENEATTIAHGSTGHGNDQVRFEAAIHALDPDMKIEAPI-RDFQWSREE 161

Query: 179 ET-WKLAQDIGGQDLVNLILE 198
           E  +  A D+     ++    
Sbjct: 162 EIEYAHAHDVPVPIDLDSPYS 182


>gi|289548750|ref|YP_003473738.1| tRNA methyl transferase-like protein [Thermocrinis albus DSM
          14484]
 gi|289182367|gb|ADC89611.1| tRNA methyl transferase-like protein [Thermocrinis albus DSM
          14484]
          Length = 346

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 4/78 (5%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ----RNKVELECRLCVRKKIVE 62
              A+ L SGG DSS  +    D+   ++ L F  G       +     R   ++ +  
Sbjct: 1  MKVRAVALLSGGLDSSLAVRLLQDQGVEIKALHFYTGFCITEHKRRLGLRREDGQQYVNP 60

Query: 63 LMPKWKDSLGEDHILPLA 80
           +           I+ ++
Sbjct: 61 ALRAAAQLGVPIEIVDIS 78


>gi|257870651|ref|ZP_05650304.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus gallinarum EG2]
 gi|257804815|gb|EEV33637.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus gallinarum EG2]
          Length = 372

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 46/191 (24%), Gaps = 11/191 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  +    ++  SGG DSS       ++   V  +             C     +   ++
Sbjct: 1   MSNENTRVVVGMSGGVDSSVTALLLKEQGYDVVGIFMKNWDDTDENGVC--TATEDYKDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      + +            + +    + +    PN  V     I        A
Sbjct: 59  AKVAAQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDYA 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLKK 177
             LG   +  G      +      H                 L          PL  ++K
Sbjct: 116 MDLGADYVATGHYAQVETDENGVTHMLRGVDSNKDQTYFLSQLSQAQLSKTMFPLGGMEK 175

Query: 178 YETWKLAQDIG 188
            E   +A+  G
Sbjct: 176 SEVRAIAERAG 186


>gi|254516593|ref|ZP_05128652.1| argininosuccinate synthase [gamma proteobacterium NOR5-3]
 gi|219675016|gb|EED31383.1| argininosuccinate synthase [gamma proteobacterium NOR5-3]
          Length = 406

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 53/174 (30%), Gaps = 9/174 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  + W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MADVKKVVLAYSGGLDTSVIVRWLQDNYACEVVTFTADIGQGEEVEPARAKAKALGVKEI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                ++    D++ P+         + T      +   ++    +  R +         
Sbjct: 61  YIEDLREEFVRDYVYPM-------FRANTIYEGEYLLGTSIARPLIAKRLVDIATETGAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
           A   G T         +   Y       + A     +L     +  +     + 
Sbjct: 114 AISHGATGKGNDQVRFELGAYALKPGIQVIAPWREWDLSSRESLMAYCRERDIP 167


>gi|307942550|ref|ZP_07657898.1| argininosuccinate synthase [Roseibium sp. TrichSKD4]
 gi|307774189|gb|EFO33402.1| argininosuccinate synthase [Roseibium sp. TrichSKD4]
          Length = 406

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 56/199 (28%), Gaps = 13/199 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L +SGG D+S  L W        V T + D GQ  ++E        +K  E++   
Sbjct: 7   KKVVLAYSGGLDTSIILKWLQTEFGCEVVTFTADLGQGEELEP------ARKKAEMLGIK 60

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +  + +     +         +      + +   ++    +  R I         A   G
Sbjct: 61  EIYIDDLREEFIRDFVFPMFRANAVYEGVYLLGTSIARPLISKRLIEIAEETGADAIAHG 120

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            T         + S Y       + A     +    + +          K +       +
Sbjct: 121 ATGKGNDQVRFELSAYALNPDIKVIAPWRDWSFKSRTDLLDFAE-----KNQIPVPKDKL 175

Query: 188 GGQDLVNLILEESHTCYLG 206
           G      +     H+   G
Sbjct: 176 GEAPFS-VDANMLHSSSEG 193


>gi|76155514|gb|AAX26805.2| SJCHGC05120 protein [Schistosoma japonicum]
          Length = 200

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 2/66 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           A   L+L SGG DS+ C +      D  ++  +  D G   K E    +   K +   + 
Sbjct: 118 ANKILILLSGGVDSTVCAALLSKTLDPSQIIAVHIDNGFLRKDESSKVIESLKSLGIKVH 177

Query: 66  KWKDSL 71
                L
Sbjct: 178 LINAGL 183


>gi|322375113|ref|ZP_08049627.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus sp. C300]
 gi|321280613|gb|EFX57652.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus sp. C300]
          Length = 415

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 51/194 (26%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 43  MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 98

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 99  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 155

Query: 121 TLAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 156 DYAMTLGADYVATGHYARVARDEDGIVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 215

Query: 175 LKKYETWKLAQDIG 188
           L+K E  KLA++ G
Sbjct: 216 LEKPEVRKLAEEAG 229


>gi|297203498|ref|ZP_06920895.1| predicted protein [Streptomyces sviceus ATCC 29083]
 gi|297148430|gb|EDY58507.2| predicted protein [Streptomyces sviceus ATCC 29083]
          Length = 440

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 48/192 (25%), Gaps = 19/192 (9%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DS+T    A      + T   +   R   +        +++ +       S G  
Sbjct: 62  LSGGMDSTTLCFVAAAEGADLLTYHVEPLDRANEDARWARLAAERLTDARHLTVPSQGAS 121

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
               L         S        +  +          + +    + T    LG   +   
Sbjct: 122 SWFDLP-------VSDGHLGEGPLPWHGGRTHLEGLAHTVAEHGSRTHLTGLGGDELFGI 174

Query: 135 VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVN 194
           +    +S        ++  +     L       +   L           AQ +GG     
Sbjct: 175 MPSILWSLAHRHPLRSLPVLRRYQLLNRWGLFAMARGLTDRT-----GFAQAVGGA---- 225

Query: 195 LILEESHTCYLG 206
               ++ TC   
Sbjct: 226 ---ADTLTCSRP 234


>gi|288561273|ref|YP_003424759.1| argininosuccinate synthase ArgG [Methanobrevibacter ruminantium M1]
 gi|288543983|gb|ADC47867.1| argininosuccinate synthase ArgG [Methanobrevibacter ruminantium M1]
          Length = 391

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 59/191 (30%), Gaps = 23/191 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L FSGG D++ C+    + +   V T   D GQ  + ELE        I       
Sbjct: 2   EKVVLAFSGGLDTTVCVKLLEEEYNYEVVTACVDVGQ-PQEELEKSQNSADNINA----- 55

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+ +I+      + +   + + +    +    P +    R +I +      A + G
Sbjct: 56  ----GKHYIIDAKD--EFAEEYIARGIKANAEYEGYPLSTALARPLIAMKIIEV-AEKEG 108

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            T I  G        +         +    I              M L + E    A++ 
Sbjct: 109 ATAIAHGCTGKGNDQFRFEAIIRSMSDFKVIA---------PIREMNLTRTEEQAYAKEH 159

Query: 188 GGQDLVNLILE 198
           G     + I  
Sbjct: 160 GLNLSYDKIYS 170


>gi|262306107|gb|ACY45646.1| gln amidotransferase [Scolopendra polymorpha]
          Length = 197

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 20/61 (32%), Gaps = 2/61 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +          V  +  D G   K E         KI   +   
Sbjct: 45  KVLMLVSGGVDSTVCAALLRKALPEEQVIAVHIDNGFMRKNESLQVEQSLNKIGLKLKVV 104

Query: 68  K 68
            
Sbjct: 105 N 105


>gi|255011782|ref|ZP_05283908.1| putative tRNA methyltransferase [Bacteroides fragilis 3_1_12]
          Length = 364

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/195 (10%), Positives = 52/195 (26%), Gaps = 21/195 (10%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN + +     L+  SGG DS+       ++   +  ++         E +    +  ++
Sbjct: 1   MN-MKESNKRVLVGMSGGIDSTATCLMLQEQGYEIVGVTMRVWGD---EPQDARELAVRM 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                   + +     +    +              + +    PN  V    +       
Sbjct: 57  GIEHYVADERVPFKDTIVKNFI-------------DEYRQGRTPNPCVMCNPLFKFRMLI 103

Query: 121 TLAYRLGITNI----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
             A +LG   I       + E +   Y     D  +     +    +  +      +   
Sbjct: 104 EWADKLGCDWIATGHYSRLEERNGYIYIVAGDDEKKDQSYFLWRLGQDVLRRCIFPLGNY 163

Query: 177 KYETWKLAQDIGGQD 191
             +T +      G +
Sbjct: 164 TKQTVRDYLREKGYE 178


>gi|167045031|gb|ABZ09695.1| putative domain of unknown function (DUF814) [uncultured marine
          crenarchaeote HF4000_APKG8G15]
          Length = 349

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 7/35 (20%), Positives = 15/35 (42%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
          ++ +    + L SGG DS+  +     +   V  +
Sbjct: 15 LMVEKKKVVALLSGGLDSTLAVKTMQKQGFEVSAV 49


>gi|301167152|emb|CBW26731.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteriovorax marinus SJ]
          Length = 382

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 51/182 (28%), Gaps = 10/182 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           + ++  SGG DSS C +   ++   V  +          E +    V +   E       
Sbjct: 17  TVIVGMSGGVDSSVCAAVLKEQGYNVIGMFMKNW-----EEQDENGVCQSSKEYADVISV 71

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
               D              ++ ++   + +    PN  +     I        A  LG  
Sbjct: 72  CEKLDIPYYSVDFVKEYRDNVFQHFLDEYEAGFTPNPDILCNREIKFKVFLNKALELGAD 131

Query: 130 NIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            +  G    +     +                   +  E    VH P+  L K E  KLA
Sbjct: 132 YLATGHYCQNILIDGENHLVKGNDPGKDQTYFLYTMKKEKLEHVHFPIGHLPKTEVRKLA 191

Query: 185 QD 186
           + 
Sbjct: 192 EK 193


>gi|294789627|ref|ZP_06754861.1| tRNA(Ile)-lysidine synthase [Simonsiella muelleri ATCC 29453]
 gi|294482428|gb|EFG30121.1| tRNA(Ile)-lysidine synthase [Simonsiella muelleri ATCC 29453]
          Length = 427

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/234 (13%), Positives = 64/234 (27%), Gaps = 24/234 (10%)

Query: 6   KKAPSALLLFSGGQDSSTCLS-WALDRFDRV-----ETLSFDYGQRNKVELECRLCVRKK 59
            +    ++ FSGG DS   L   A+ R   V       +  +  Q      +  L   + 
Sbjct: 12  HQNQRIIVGFSGGLDSVVLLHLLAMARTQYVFDLSAIHVHHNLSQNADKWADFCLDFCEN 71

Query: 60  I-----VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII 114
                 ++ +    + LG +     A        +         +D+ +   F+      
Sbjct: 72  WKIPLTIKYVQVNSEKLGVEAAARAARYAVFREYAGDVLALAHHRDDQVETFFLAALRGS 131

Query: 115 FLVFAATLAYRL--GITNI------VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV 166
            +   A +A     G   I              Y+ +    H T  + +  I L      
Sbjct: 132 GIRGLAAMAENQFSGSLKIARPLLHFSRHQIEQYAQHNQLTHITDDSNDNPIFLRNWLRH 191

Query: 167 ---TVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
                    +            ++  QD + LI E + + Y      +    + 
Sbjct: 192 NGLPNIRQRLPHTDQHIIAAIANL--QDELALINEITESDYQHIYQNQKFNIFH 243


>gi|295698406|ref|YP_003603061.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Riesia pediculicola USDA]
 gi|291157242|gb|ADD79687.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Riesia pediculicola USDA]
          Length = 363

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 49/188 (26%), Gaps = 4/188 (2%)

Query: 5   IKKAP----SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           +K         ++  SGG DSS        R   V  L     + +       +   K +
Sbjct: 1   MKNKKNYVARVVVGMSGGVDSSVAALLLKKRNYEVLGLFMKNWEEDDGHSCSYIEDLKDV 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  K K  L + +                         + L N  +  +  +      
Sbjct: 61  KSVCEKLKIQLYQVNFSIEYWNKVFKVFLKKYKTGKTPNPDVLCNKEIKFKEFLDFSLEN 120

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
             A  +   + V      +       + +          L       V  P+   KK E 
Sbjct: 121 LNADYIATGHYVRKKKRNEKYILLKAKDERKDQSYFLHLLDQSQLEKVIFPIGEFKKSEI 180

Query: 181 WKLAQDIG 188
            K+A+  G
Sbjct: 181 RKIAEKNG 188


>gi|237755401|ref|ZP_04584028.1| GMP synthase [glutamine-hydrolyzing] [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237692442|gb|EEP61423.1| GMP synthase [glutamine-hydrolyzing] [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 511

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 57/192 (29%), Gaps = 18/192 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +     A+   SGG DSS       +   D +  +  D G   K E   R  V K   + 
Sbjct: 211 MVGNKKAICALSGGVDSSVAAVLVHNAIGDNLTCIFVDNGLLRKGE---REQVEKTFRDN 267

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     L  L  I+     + +   +            +++ +LV      
Sbjct: 268 FH-ISLIVVDAKDRFLKALKGITDPEQKRKIIGNLFIEVFEEEAKKLKDVEYLVQGTLYP 326

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +              S         I+       L    ++ +  PL  L K E  +L
Sbjct: 327 DVIE-------------SVSVKGPSAVIKTHHNVGGLPERMNLKLIEPLRELFKDEVREL 373

Query: 184 AQDIGGQDLVNL 195
            +++G  + +  
Sbjct: 374 GKELGLPEEIIY 385


>gi|90022068|ref|YP_527895.1| argininosuccinate synthase [Saccharophagus degradans 2-40]
 gi|119361319|sp|Q21HZ6|ASSY_SACD2 RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|89951668|gb|ABD81683.1| argininosuccinate synthase [Saccharophagus degradans 2-40]
          Length = 409

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 54/180 (30%), Gaps = 13/180 (7%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
                 +L +SGG D+S  + W  + +   V T + D GQ  +VE          + E+ 
Sbjct: 5   SSIKKVVLAYSGGLDTSVIVKWLQETYNCEVVTFTADIGQGEEVEPARAKAEALGVKEIY 64

Query: 65  -PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
               ++    D++ P+         + T      +   ++    +  R I         A
Sbjct: 65  IDDLREEFVRDYVFPM-------FRANTIYEGEYLLGTSIARPLIAKRLIEIANETGADA 117

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM----ESHVTVHTPLMWLKKYE 179
              G T         +   Y       + A     +L        +   H   +   K +
Sbjct: 118 ISHGATGKGNDQVRFELGAYALKPGIHVIAPWRDWDLTSRETLMDYCAKHNIPVDYTKAK 177


>gi|299141020|ref|ZP_07034158.1| GMP synthase [Prevotella oris C735]
 gi|298577986|gb|EFI49854.1| GMP synthase [Prevotella oris C735]
          Length = 514

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 55/188 (29%), Gaps = 21/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS C +       + +  +  D+G   K E    +   + +   +  
Sbjct: 213 NDRVILGLSGGVDSSVCATLLNKAIGNNLTCIFVDHGMLRKNEFTKVMEAYQGLGLNVVG 272

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              S      L                       +      + GR+ + +  A       
Sbjct: 273 VDASEKFFKDLD-------------------GVTDPEQKRKIIGRDFVEVFNAEAKKIT- 312

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G    D           I++      L  E  + +  PL WL K E  ++  +
Sbjct: 313 DAKWLAQGTIYPDRIESLSITGMVIKSHHNVGGLPKEMKLKLCEPLQWLFKDEVRRVGYE 372

Query: 187 IGGQDLVN 194
           +G  + + 
Sbjct: 373 LGMPERLI 380


>gi|281424232|ref|ZP_06255145.1| GMP synthase [Prevotella oris F0302]
 gi|281401501|gb|EFB32332.1| GMP synthase [Prevotella oris F0302]
          Length = 514

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 55/188 (29%), Gaps = 21/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS C +       + +  +  D+G   K E    +   + +   +  
Sbjct: 213 NDRVILGLSGGVDSSVCATLLNKAIGNNLTCIFVDHGMLRKNEFTKVMEAYQGLGLNVVG 272

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              S      L                       +      + GR+ + +  A       
Sbjct: 273 VDASEKFFKDLD-------------------GVTDPEQKRKIIGRDFVEVFNAEAKKIT- 312

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G    D           I++      L  E  + +  PL WL K E  ++  +
Sbjct: 313 DAKWLAQGTIYPDRIESLSITGMVIKSHHNVGGLPKEMKLKLCEPLQWLFKDEVRRVGYE 372

Query: 187 IGGQDLVN 194
           +G  + + 
Sbjct: 373 LGMPERLI 380


>gi|253567176|ref|ZP_04844626.1| tRNA-specific 2-thiouridylase mnmA 3 [Bacteroides sp. 3_2_5]
 gi|251944007|gb|EES84526.1| tRNA-specific 2-thiouridylase mnmA 3 [Bacteroides sp. 3_2_5]
          Length = 362

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/192 (10%), Positives = 54/192 (28%), Gaps = 21/192 (10%)

Query: 5   IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +K++   +L+  SGG DS+       ++   +  ++         E +    +  ++   
Sbjct: 1   MKESKKRVLVGMSGGIDSTATCLMLQEQGYEIVGVTMRVWGD---EPQDARELAARMGIE 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                + +   + +    +              + +    PN  V    +         A
Sbjct: 58  HYVADERVPFKNTIVKNFI-------------DEYRQGRTPNPCVMCNPLFKFRMLIEWA 104

Query: 124 YRLGITNI----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            +LG   I       + E +   Y     D  +     +    +  +      +     +
Sbjct: 105 DKLGCDWIATGHYSRLEERNGHIYIVAGDDDKKDQSYFLWRLGQDVLRRCIFPLGNYTKQ 164

Query: 180 TWKLAQDIGGQD 191
           T +      G +
Sbjct: 165 TVRDYLREKGYE 176


>gi|146421465|ref|XP_001486678.1| hypothetical protein PGUG_00055 [Meyerozyma guilliermondii ATCC
           6260]
 gi|146387799|gb|EDK35957.1| hypothetical protein PGUG_00055 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 416

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 38/135 (28%), Gaps = 16/135 (11%)

Query: 5   IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + K    + L +SGG D+S  L+W L++   V     + GQ  + + E        I   
Sbjct: 1   MSKGK--VCLAYSGGLDTSVILAWLLEQGYEVIAFLANIGQ--EEDFEAAEKKALAIGA- 55

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                        + + +  +   S     +       N+          +       +A
Sbjct: 56  ----------TKFVVVDVRKEFVESVCFPAIQANAIYENVYLLGTSLARPVIAQAQIKVA 105

Query: 124 YRLGITNIVIGVCET 138
                  +  G    
Sbjct: 106 EENDCFAVSHGCTGK 120


>gi|114799175|ref|YP_762162.1| argininosuccinate synthase [Hyphomonas neptunium ATCC 15444]
 gi|119361281|sp|Q0BWI1|ASSY_HYPNA RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|114739349|gb|ABI77474.1| argininosuccinate synthase [Hyphomonas neptunium ATCC 15444]
          Length = 413

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 60/210 (28%), Gaps = 17/210 (8%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
           M++        +L +SGG D+S  L W        V T + D GQ  ++E   +  +   
Sbjct: 1   MSNAASAPKKVVLAYSGGLDTSIILKWLQVEFGCEVVTFTADLGQGEELEPARKKALAAG 60

Query: 60  I---VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
           +      +   ++    D + P+     +         ++           +  R I   
Sbjct: 61  VKPENIFIEDVREEFVRDFVFPMFRANAVYEGVYLLGTSIARP-------LIAKRQIEIA 113

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
                 A   G T         +   Y       + A          + +          
Sbjct: 114 DMVGADAVCHGATGKGNDQVRFELGYYGLNPDIKVIAPWRDWAFKSRTDLLKFAEEHG-- 171

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLG 206
                ++A+D  G+   ++     H+   G
Sbjct: 172 ----IEIAKDKRGEAPFSVDANLLHSSSEG 197


>gi|320168295|gb|EFW45194.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Capsaspora owczarzaki ATCC 30864]
          Length = 554

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/194 (11%), Positives = 48/194 (24%), Gaps = 7/194 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-----RNKVELECRLCVRKKIV 61
             P   +  SGG DS+        +   V  +            +    +          
Sbjct: 117 PPPRVAVGVSGGVDSTVAAYLLKRQGLDVIGVYMKNWDELDETGHCTGEQDMRDAALSCA 176

Query: 62  ELMP--KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
            L    +  + + E       +         T N  +           +      F    
Sbjct: 177 ALGIPFRTVNFVKEYWNDVFTVFLQEYQRGRTPNPDILCNREIKFKALLNVVQTSFGAQF 236

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
               +  G+         + +    +              +  E+      PL  L+K++
Sbjct: 237 LATGHYAGVNRSAFASGLSPHPQLIEAHDKAKDQTYFLAAISSEALSRTLFPLYGLEKHQ 296

Query: 180 TWKLAQDIGGQDLV 193
             ++A +IG  +L 
Sbjct: 297 VKRIAHEIGLIELS 310


>gi|320168110|gb|EFW45009.1| tRNA methyl transferase [Capsaspora owczarzaki ATCC 30864]
          Length = 647

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/194 (11%), Positives = 48/194 (24%), Gaps = 7/194 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-----RNKVELECRLCVRKKIV 61
             P   +  SGG DS+        +   V  +            +    +          
Sbjct: 210 PPPRVAVGVSGGVDSTVAAYLLKRQGLDVIGVYMKNWDELDETGHCTGEQDMRDAALSCA 269

Query: 62  ELMP--KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
            L    +  + + E       +         T N  +           +      F    
Sbjct: 270 ALGIPFRTVNFVKEYWNDVFTVFLQEYQRGRTPNPDILCNREIKFKALLNVVQTSFGAQF 329

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
               +  G+         + +    +              +  E+      PL  L+K++
Sbjct: 330 LATGHYAGVNRSAFASGLSPHPQLIEAHDKAKDQTYFLAAISSEALSRTLFPLYGLEKHQ 389

Query: 180 TWKLAQDIGGQDLV 193
             ++A +IG  +L 
Sbjct: 390 VKRIAHEIGLIELS 403


>gi|307702622|ref|ZP_07639574.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus oralis ATCC 35037]
 gi|307623738|gb|EFO02723.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus oralis ATCC 35037]
          Length = 373

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 52/194 (26%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D  K     ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   I  G                R       +T     L  E       PL  
Sbjct: 114 DYAMTLGADYIATGHYARVARDEDGIVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  KLA++ G
Sbjct: 174 LEKPEVRKLAEEAG 187


>gi|254472503|ref|ZP_05085903.1| argininosuccinate synthase [Pseudovibrio sp. JE062]
 gi|211958786|gb|EEA93986.1| argininosuccinate synthase [Pseudovibrio sp. JE062]
          Length = 414

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 46/153 (30%), Gaps = 7/153 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L +SGG D+S  L W        V T + D GQ  ++E        ++  EL+   
Sbjct: 7   KKVVLAYSGGLDTSIILKWLQAEYGCEVVTFTADLGQGEELEP------ARRKAELLGIR 60

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +  + +     +         +      + +   ++    +  R I         A   G
Sbjct: 61  EIYIDDLREEFIRDFVFPMFRANAVYEGVYLLGTSIARPLISKRLIEIAEETGADAVAHG 120

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
            T         + + Y       + A      L
Sbjct: 121 ATGKGNDQVRFELACYALNPDIKVIAPWRDWTL 153


>gi|255002942|ref|ZP_05277906.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (trmU)
           [Anaplasma marginale str. Puerto Rico]
 gi|255004068|ref|ZP_05278869.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (trmU)
           [Anaplasma marginale str. Virginia]
          Length = 379

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/148 (10%), Positives = 39/148 (26%), Gaps = 3/148 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           + ++  SGG DSS   +   +R  +V   +      +        C    I +       
Sbjct: 22  TVVVAMSGGVDSSVVAALLHERGYKVIGATMQLHSSSPASGAKSCCGSVDIYDAKRVAST 81

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                ++L      ++    +  +     +    P   V     +        A  +G  
Sbjct: 82  LGFPHYVLD---YEEVFRREVIDDFINSYKRGETPIPCVKCNQTVKFRDMLKAARAIGGD 138

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETA 157
            +  G          + +    +  +  
Sbjct: 139 VVATGHYVRRVEIAGEQQILRGKDPQKD 166


>gi|254994811|ref|ZP_05277001.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (trmU)
           [Anaplasma marginale str. Mississippi]
          Length = 379

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/148 (10%), Positives = 39/148 (26%), Gaps = 3/148 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           + ++  SGG DSS   +   +R  +V   +      +        C    I +       
Sbjct: 22  TVVVAMSGGVDSSVVAALLHERGYKVIGATMQLHSSSPASGAKSCCGSVDIYDAKRVAST 81

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                ++L      ++    +  +     +    P   V     +        A  +G  
Sbjct: 82  LGFPHYVLD---YEEVFRREVIDDFINSYKRGETPIPCVKCNQTVKFRDMLKAARAIGGD 138

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETA 157
            +  G          + +    +  +  
Sbjct: 139 VVATGHYVRRVEIAGEQQILRGKDPQKD 166


>gi|161870026|ref|YP_001599195.1| hypothetical protein NMCC_1059 [Neisseria meningitidis 053442]
 gi|161595579|gb|ABX73239.1| hypothetical protein NMCC_1059 [Neisseria meningitidis 053442]
          Length = 436

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/196 (12%), Positives = 45/196 (22%), Gaps = 31/196 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELM 64
               +  SGG DS   L   +    R     E L   +G                     
Sbjct: 22  KKTAVALSGGLDSVVLLHLLVRAGKRAGFVPEALHIHHG-----LSPRADDWADFCQNYC 76

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L    +        I  ++  K  A   +           R+     F   +A 
Sbjct: 77  DMLGVGLETVKVCVEKNGLGIEAAARQKRYAAFAEKGFDVLALAHHRDDQIETFMLAVAR 136

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G+  +        +                           +  PL+   + + W  A
Sbjct: 137 GGGLRALAAMPTVRPFGEKGI----------------------IWRPLLPFSRQDIWDYA 174

Query: 185 QDIGGQDLVNLILEES 200
           Q  G  ++ +    ++
Sbjct: 175 QKHGLPNIEDESNSDT 190


>gi|94987032|ref|YP_594965.1| GMP synthase [Lawsonia intracellularis PHE/MN1-00]
 gi|94731281|emb|CAJ54644.1| GMP synthase-Glutamine amidotransferase domain [Lawsonia
           intracellularis PHE/MN1-00]
          Length = 513

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 49/185 (26%), Gaps = 18/185 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+            R+  +  D G   + E +              +   
Sbjct: 219 VVCALSGGVDSTVVALILNQAIGKRLHCIFVDNGLLREGEKD--------------EVIS 264

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            L E   L L  +                ++                  A      L   
Sbjct: 265 YLREHFDLNLIFVQAQDRFLKQLEGIQDPEEKRKIIGHTFIDVFDEEARAIGKVDFLAQG 324

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   + E   S         I++      L  +  + +  PL  L K E  K+A ++G 
Sbjct: 325 TLYSDIIE---SIPHRGSSVVIKSHHNVGGLPEKMSLKLIEPLKELFKDEVRKVAVELGL 381

Query: 190 QDLVN 194
            D + 
Sbjct: 382 PDSII 386


>gi|56416599|ref|YP_153673.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Anaplasma marginale str. St. Maries]
 gi|222474965|ref|YP_002563380.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (trmU)
           [Anaplasma marginale str. Florida]
 gi|269958985|ref|YP_003328774.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Anaplasma centrale str. Israel]
 gi|81359210|sp|Q5PBB1|MNMA_ANAMM RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|56387831|gb|AAV86418.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Anaplasma marginale str. St. Maries]
 gi|222419101|gb|ACM49124.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (trmU)
           [Anaplasma marginale str. Florida]
 gi|269848816|gb|ACZ49460.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Anaplasma centrale str. Israel]
          Length = 387

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/148 (10%), Positives = 39/148 (26%), Gaps = 3/148 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           + ++  SGG DSS   +   +R  +V   +      +        C    I +       
Sbjct: 30  TVVVAMSGGVDSSVVAALLHERGYKVIGATMQLHSSSPASGAKSCCGSVDIYDAKRVAST 89

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                ++L      ++    +  +     +    P   V     +        A  +G  
Sbjct: 90  LGFPHYVLD---YEEVFRREVIDDFINSYKRGETPIPCVKCNQTVKFRDMLKAARAIGGD 146

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETA 157
            +  G          + +    +  +  
Sbjct: 147 VVATGHYVRRVEIAGEQQILRGKDPQKD 174


>gi|14591232|ref|NP_143309.1| hypothetical protein PH1441 [Pyrococcus horikoshii OT3]
 gi|3257865|dbj|BAA30548.1| 428aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 428

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 28/69 (40%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  +A++ +SGG+DS+  L  A   FD V  +         +  E    V  K+   + K
Sbjct: 230 KDKTAVVPWSGGKDSTATLILASKVFDEVTAVYVKMEYEMPLTDEYIEKVAHKLGIDVIK 289

Query: 67  WKDSLGEDH 75
            +  +    
Sbjct: 290 VEVPMPVHK 298


>gi|282881825|ref|ZP_06290478.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Peptoniphilus lacrimalis 315-B]
 gi|281298317|gb|EFA90760.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Peptoniphilus lacrimalis 315-B]
          Length = 351

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/195 (12%), Positives = 54/195 (27%), Gaps = 13/195 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K    +L  SGG DSS       ++   V  +            +      +  ++++  
Sbjct: 2   KNKKVVLGMSGGVDSSVAAILLKNQGYDVIGVFMRNW-----ADDGVCTATEDYMDVVKV 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 +   +      +   + +      + +    PN  V     I        A   
Sbjct: 57  ASQLGIKYFTVN---FEEEYRNQVFSYFLNEYKKGRTPNPDVMCNTEIKFKAFLNYALNF 113

Query: 127 GITNIVIGVCET--DYSGYPDCRHDTIRAIETAINLGMESHVTVH---TPLMWLKKYETW 181
               I +G      +  G            + +  L   +   +     P+  L+K +  
Sbjct: 114 DCDYIAMGHYARTKNIDGKTYLCRGLDNNKDQSYFLSRVTEDALKKTLFPIGELQKDQVR 173

Query: 182 KLAQDIGGQDLVNLI 196
           K+A+D G    +   
Sbjct: 174 KIAKDYGLSTALKKD 188


>gi|262306077|gb|ACY45631.1| gln amidotransferase [Machiloides banksi]
          Length = 198

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 34/120 (28%), Gaps = 3/120 (2%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIV-ELM 64
               LLL SGG DS+ C +          V  +  D G   K E +       K+   L 
Sbjct: 43  NSKVLLLVSGGVDSTVCGALLHKALPEDQVIGVHIDNGFMRKHESQKVEQSLAKVGLRLR 102

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                    +    + I       + T+   M     +         ++   V    +A 
Sbjct: 103 AVRAAHTFSNATTTIPIDKKEGGGARTRVTKMLCMTQDPEEKRKIIGDVFVKVADEVMAE 162


>gi|240113689|ref|ZP_04728179.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae MS11]
          Length = 367

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 46/191 (24%), Gaps = 11/191 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN       + ++  SGG DSS   +    +  +V  +     + +  +  C +      
Sbjct: 1   MN-TTSNTSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWENDDNDEYCSIKQ---- 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +       +      + +          +      +      PN  V     I      
Sbjct: 56  -DSFDAIAVADIVGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLCNAEIKFKCFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A   G   I  G                              L          PL  L
Sbjct: 115 DYAVEQGADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLKPFQLERAIFPLGGL 174

Query: 176 KKYETWKLAQD 186
           +K E  +LA +
Sbjct: 175 EKPEVRRLAAE 185


>gi|240014473|ref|ZP_04721386.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae DGI18]
 gi|240120995|ref|ZP_04733957.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae PID24-1]
 gi|268599754|ref|ZP_06133921.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae MS11]
 gi|268583885|gb|EEZ48561.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae MS11]
          Length = 383

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 46/191 (24%), Gaps = 11/191 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN       + ++  SGG DSS   +    +  +V  +     + +  +  C +      
Sbjct: 17  MN-TTSNTSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWENDDNDEYCSIKQ---- 71

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +       +      + +          +      +      PN  V     I      
Sbjct: 72  -DSFDAIAVADIVGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLCNAEIKFKCFL 130

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A   G   I  G                              L          PL  L
Sbjct: 131 DYAVEQGADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLKPFQLERAIFPLGGL 190

Query: 176 KKYETWKLAQD 186
           +K E  +LA +
Sbjct: 191 EKPEVRRLAAE 201


>gi|254425319|ref|ZP_05039037.1| asparagine synthase (glutamine-hydrolyzing) [Synechococcus sp. PCC
           7335]
 gi|196192808|gb|EDX87772.1| asparagine synthase (glutamine-hydrolyzing) [Synechococcus sp. PCC
           7335]
          Length = 496

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 28/78 (35%), Gaps = 2/78 (2%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +  SGG DSS   +    +   +   SF  G  +  +L     V + +  +  ++  S  
Sbjct: 224 VFLSGGLDSSIVAALMKQQVKELH--SFSVGLSHSPDLRAARLVAEHLGTVHHEYVYSEA 281

Query: 73  EDHILPLAILGDISHSSL 90
           E   +   ++  +     
Sbjct: 282 EMQTVLSDVIYYLESYDP 299


>gi|89094503|ref|ZP_01167442.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Oceanospirillum sp. MED92]
 gi|89081239|gb|EAR60472.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Oceanospirillum sp. MED92]
          Length = 371

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 39/150 (26%), Gaps = 8/150 (5%)

Query: 1   MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           M D+          ++  SGG DSS      + +  +VE L          +     C  
Sbjct: 1   MTDLSNTDNSSAKVIVGMSGGVDSSVSALLLMQQGYQVEGLFMKNW---DEDDGTEYCTA 57

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           K+ +       D LG  H+       +   +     +             +  R  I   
Sbjct: 58  KEDLADAQAVCDKLG-IHLHTANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFK 115

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCR 147
                A  LG   I  G            R
Sbjct: 116 AFLEYAVELGADFIATGHYVRRGDRDGKTR 145


>gi|307707803|ref|ZP_07644280.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus mitis NCTC 12261]
 gi|307616063|gb|EFN95259.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus mitis NCTC 12261]
          Length = 373

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 51/194 (26%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M++  K     ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSENSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +           S+ +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDSVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMW 174
             A  LG   +  G             H                 L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYARVARDEDGTVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  KLA++ G
Sbjct: 174 LEKPEVRKLAEEAG 187


>gi|317128230|ref|YP_004094512.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cellulosilyticus DSM 2522]
 gi|315473178|gb|ADU29781.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cellulosilyticus DSM 2522]
          Length = 367

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/180 (10%), Positives = 38/180 (21%), Gaps = 5/180 (2%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M +  K+    ++  SGG DSS           +V  +             C     +  
Sbjct: 1   MMNTEKQNIRVVVGMSGGVDSSVAAYLLKQEGYQVIGIFMKNWDDTDEFGVC--TATEDY 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            +      + +    PN  V     I      
Sbjct: 59  NDVIRVCNQLDIPYYAVN---FEKEYWDKVFTYFLNEYRAGRTPNPDVMCNKEIKFKAFL 115

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
             A  LG   +  G                           + +        +     E 
Sbjct: 116 DHAMSLGADYVATGHYARVRHSDNGVELLRGIDENKDQTYFLNALSEDQLKHVLFPIGEI 175


>gi|84489405|ref|YP_447637.1| hypothetical protein Msp_0596 [Methanosphaera stadtmanae DSM 3091]
 gi|84372724|gb|ABC56994.1| predicted subunit of tRNA methyltransferase [Methanosphaera
           stadtmanae DSM 3091]
          Length = 196

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 55/165 (33%), Gaps = 6/165 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV----ELECRLCVRKKIVELMP 65
            A +L+SGG+DSS            VE ++ ++G  N      E    L  + K++ L  
Sbjct: 2   KAAVLYSGGKDSSLMAVILDRLGYDVELITINFGIFNSSIPAQESAKSLGFKHKVLNLDK 61

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL--A 123
                  +  I        I+H        +  +   + +       I  L F+      
Sbjct: 62  TILTDAVDMIIRDNFPNNGINHIHHMVLEHLADEYQVIADGTRREDRIPKLKFSEIQSLE 121

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV 168
            R GI  + +             R  T++  E+ I+   +  + +
Sbjct: 122 DRKGIQYLNLTGIGYKTINDTSDRLFTLQKSESNIHNSSDYEMEI 166


>gi|83647669|ref|YP_436104.1| argininosuccinate synthase [Hahella chejuensis KCTC 2396]
 gi|119361279|sp|Q2SCE5|ASSY_HAHCH RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|83635712|gb|ABC31679.1| argininosuccinate synthase [Hahella chejuensis KCTC 2396]
          Length = 404

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 53/170 (31%), Gaps = 13/170 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE- 62
           + K    +L +SGG D+S  + W  + +   V T + D GQ  +VE        +K+   
Sbjct: 1   MSKVNKVVLAYSGGLDTSVIVKWLQENYDCEVVTFTADIGQGEEVEP--ARAKAEKLGVK 58

Query: 63  --LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
              +   ++    D + P+         + T      +   ++    +  R +       
Sbjct: 59  QIFIEDLREEFARDFVFPM-------FRANTIYEGEYLLGTSIARPLIAKRLVEIANETG 111

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT 170
             A   G T         +   Y       + A     +L     +  + 
Sbjct: 112 ADAISHGATGKGNDQVRFELGAYALKPGIKVIAPWREWDLTSREKLLTYC 161


>gi|84514902|ref|ZP_01002265.1| argininosuccinate synthase [Loktanella vestfoldensis SKA53]
 gi|84511061|gb|EAQ07515.1| argininosuccinate synthase [Loktanella vestfoldensis SKA53]
          Length = 405

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 49/157 (31%), Gaps = 7/157 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W   +    V T + D GQ  ++E         +++  
Sbjct: 1   MTAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEPARAKA---EMMGA 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + + L E+ +            +      + +   ++    +  R +         A
Sbjct: 58  KSIYIEDLREEFVRDFVF---PMFRANALYEGLYLLGTSIARPLISKRLVEIAAIEGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         + + Y       + A     +L
Sbjct: 115 VAHGATGKGNDQVRFELAAYALNPDIKVIAPWREWDL 151


>gi|15835177|ref|NP_296936.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chlamydia muridarum Nigg]
 gi|7190601|gb|AAF39399.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chlamydia muridarum Nigg]
          Length = 373

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 50/184 (27%), Gaps = 7/184 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             + ++  SGG DSS        +    V  L        + +        K  +++   
Sbjct: 17  RKTVIVAMSGGVDSSVVAYLLKKQGKYDVIGLFMK--NWEEQDENGECTATKDFLDVEQI 74

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +      + +  +   +      ++ +             +  R I F +    +    
Sbjct: 75  AEQLSIPYYTV--SFAKEYKERVFSRFLKEYTNGYTPNPDVLCNREIKFDLLQKKVRELK 132

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYETWKLA 184
           G        C     G    R       ++    G        V  PL  + K E  +LA
Sbjct: 133 GDFLATGHYCRGGLDGTGLFRGVDPNKDQSYFLCGTPKEALSNVLFPLGGMYKTEVRQLA 192

Query: 185 QDIG 188
            + G
Sbjct: 193 IEAG 196


>gi|299133122|ref|ZP_07026317.1| argininosuccinate synthase [Afipia sp. 1NLS2]
 gi|298593259|gb|EFI53459.1| argininosuccinate synthase [Afipia sp. 1NLS2]
          Length = 445

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 3/72 (4%)

Query: 1  MNDIIKKAPS---ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M+ I+K  P      + FSGG D+S  L W   +  RV   + + GQ ++ + +      
Sbjct: 1  MSTILKNLPKGENVGIAFSGGLDTSAALLWMKQKGARVFAYTANLGQPDEADYDAIPRKA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 MEFGAEKARLVD 72


>gi|294495633|ref|YP_003542126.1| argininosuccinate synthase [Methanohalophilus mahii DSM 5219]
 gi|292666632|gb|ADE36481.1| argininosuccinate synthase [Methanohalophilus mahii DSM 5219]
          Length = 394

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 61/204 (29%), Gaps = 10/204 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
               A+L +SGG D+S C+    +++  D V T++ D GQ  + ++E      + I +L 
Sbjct: 1   MVKKAVLAYSGGLDTSICVPLLKEKYDCDEVITVAVDVGQ-PREDVEEATKKAQDISDLH 59

Query: 65  P--KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                ++   +D+I PL          +      +                  L    T 
Sbjct: 60  FTLDVREEFVKDYIFPLIKANGDYEGYVMGTSIARPLIAKKVVEIAEKEGASMLAHGCTG 119

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
                +    +          P    +  R  E          V+V +   W      W 
Sbjct: 120 KGNDQLRFEAVFRLTDMEVVAPMRDMNLTREWEIEYAKQHGIPVSVTSSKPWSIDENIWS 179

Query: 183 LAQDIG-----GQDLVNLILEESH 201
            + + G     G      I   + 
Sbjct: 180 RSIEGGKLEDPGYIPPEEIYNWTV 203


>gi|292670953|ref|ZP_06604379.1| argininosuccinate synthase [Selenomonas noxia ATCC 43541]
 gi|292647574|gb|EFF65546.1| argininosuccinate synthase [Selenomonas noxia ATCC 43541]
          Length = 404

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 52/201 (25%), Gaps = 16/201 (7%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           + K+    +L +SGG D+S  + W  +      V  +  D GQ  ++E            
Sbjct: 1   MAKQIKKVVLAYSGGLDTSVIIPWLKEHYDGCEVIAVCADIGQGEELEP----------- 49

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                      + HI+ L       +   T       +              +       
Sbjct: 50  VHDKALASGASKVHIVDLTKEFLEEYVWPTLKAGAVYE--GKYLLGTSFARPVIAKALVE 107

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-HVTVHTPLMWLKKYET 180
           +A R G   I  G                  A    I        +   +  +   K   
Sbjct: 108 IAKREGADAIAHGATGKGNDQVRFELTVKALAPNLQIIAPWREWDLDSRSAEIAYAKKHG 167

Query: 181 WKLAQDIGGQDLVNLILEESH 201
             +A+D     +   I   SH
Sbjct: 168 IPVAEDNKTYSMDRNIWHLSH 188


>gi|288957052|ref|YP_003447393.1| argininosuccinate synthase [Azospirillum sp. B510]
 gi|288909360|dbj|BAI70849.1| argininosuccinate synthase [Azospirillum sp. B510]
          Length = 411

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 46/157 (29%), Gaps = 5/157 (3%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K+    +L +SGG D+S  L W  + +   V T + D GQ  ++E        + +    
Sbjct: 7   KQIKKVVLAYSGGLDTSVILKWLQETYSCEVVTFTADLGQGEELEP--ARKKAELLGIKP 64

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 + +     +         + T      +   ++    +  R I         A 
Sbjct: 65  ENI--FIDDLREEFVRDFVFPMFRANTLYEGTYLLGTSIARPLIAKRQIEIANMVGADAV 122

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
             G T         +   Y      ++ A      L 
Sbjct: 123 AHGATGKGNDQVRFELGYYALRPDISVIAPWREWTLN 159


>gi|225849593|ref|YP_002729827.1| GMP synthase [Persephonella marina EX-H1]
 gi|225645120|gb|ACO03306.1| GMP synthase [Persephonella marina EX-H1]
          Length = 512

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 55/192 (28%), Gaps = 18/192 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +     A+   SGG DSS       +   D +  +  D G   K E   R  V K   + 
Sbjct: 212 MVGDKKAICALSGGVDSSVAAVLVHNAIGDNLTCIFVDNGLLRKGE---REKVEKTFRDH 268

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                        L +    +    +L      + +   + N F+               
Sbjct: 269 FHIP---------LIVVDARERFLEALKGVTDPEQKRKIIGNLFIEIFEEEAKKIPDVEF 319

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              G         +   S         I+       L  + ++ +  PL  L K E  +L
Sbjct: 320 LVQG-----TLYPDVIESVSVKGPSAVIKTHHNVGGLPEKMNLKLIEPLRELFKDEVREL 374

Query: 184 AQDIGGQDLVNL 195
            +++G  D +  
Sbjct: 375 GKELGLPDEIIY 386


>gi|194098553|ref|YP_002001615.1| tRNA(Ile)-lysidine synthase [Neisseria gonorrhoeae NCCP11945]
 gi|193933843|gb|ACF29667.1| tRNA(Ile)-lysidine synthase [Neisseria gonorrhoeae NCCP11945]
 gi|317164226|gb|ADV07767.1| tRNA(Ile)-lysidine synthase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 445

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/196 (11%), Positives = 42/196 (21%), Gaps = 31/196 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
               +  SGG DS   L              E L   +G                     
Sbjct: 31  KKTAVALSGGLDSVVLLHLLVCAGKRAGFVPEALHIHHG-----LSPRADDWADFCRNYC 85

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L    +        I  ++  K  A   +           R+     F   +A 
Sbjct: 86  DMLGVGLETVKVCVEKNGLGIEAAARQKRYAEFAEKGFDVLALAHHRDDQIETFMLAVAR 145

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G+  +                                    +  PL+   + + W  A
Sbjct: 146 GGGLRALAAMPAVRPLGENGI----------------------IWRPLLPFSRQDIWDYA 183

Query: 185 QDIGGQDLVNLILEES 200
           +  G  ++ +    ++
Sbjct: 184 RKHGLPNIEDESNTDT 199


>gi|59801231|ref|YP_207943.1| hypothetical protein NGO0820 [Neisseria gonorrhoeae FA 1090]
 gi|75432494|sp|Q5F8F6|TILS_NEIG1 RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|59718126|gb|AAW89531.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
          Length = 426

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/196 (11%), Positives = 42/196 (21%), Gaps = 31/196 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
               +  SGG DS   L              E L   +G                     
Sbjct: 12  KKTAVALSGGLDSVVLLHLLVCAGKRAGFVPEALHIHHG-----LSPRADDWADFCRNYC 66

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L    +        I  ++  K  A   +           R+     F   +A 
Sbjct: 67  DMLGVGLETVKVCVEKNGLGIEAAARQKRYAEFAEKGFDVLALAHHRDDQIETFMLAVAR 126

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G+  +                                    +  PL+   + + W  A
Sbjct: 127 GGGLRALAAMPAVRPLGENGI----------------------IWRPLLPFSRQDIWDYA 164

Query: 185 QDIGGQDLVNLILEES 200
           +  G  ++ +    ++
Sbjct: 165 RKHGLPNIEDESNTDT 180


>gi|315282423|ref|ZP_07870840.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria marthii FSL S4-120]
 gi|313613928|gb|EFR87655.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria marthii FSL S4-120]
          Length = 371

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/185 (11%), Positives = 48/185 (25%), Gaps = 12/185 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS       ++   V  +   ++   ++  +         ++ +  +  
Sbjct: 9   RVVVGMSGGVDSSVTAHILKEQGYDVIGIFMKNWDDTDEFGVCTATEDYDDVIRVANQIG 68

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                     +    +      T  +             +     I        A  LG 
Sbjct: 69  IPYYA-----VNFEKEYWDKVFTYFLDEYKLGRTPNPDVMC-NKEIKFKAFLEHAESLGA 122

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +  G          +        +          L  +    V  PL  ++K E  ++
Sbjct: 123 DYVATGHYAQVKKVGDEIELLRGVDNNKDQTYFLNQLSQDQLKKVMFPLGGMEKTEVREI 182

Query: 184 AQDIG 188
           A+  G
Sbjct: 183 AKKAG 187


>gi|313608681|gb|EFR84517.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria monocytogenes FSL F2-208]
          Length = 371

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/185 (11%), Positives = 48/185 (25%), Gaps = 12/185 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS       ++   V  +   ++   ++  +         ++ +  +  
Sbjct: 9   RVVVGMSGGVDSSVTAHILKEQGYDVIGIFMKNWDDTDEFGVCTATEDYDDVIRVANQIG 68

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                     +    +      T  +             +     I        A  LG 
Sbjct: 69  IPYYA-----VNFEKEYWDKVFTYFLDEYKLGRTPNPDVMC-NKEIKFKAFLEHAESLGA 122

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +  G          +        +          L  +    V  PL  ++K E  ++
Sbjct: 123 DYVATGHYAQVKKVGDEIELLRGVDNNKDQTYFLNQLSQDQLKKVMFPLGGMEKTEVREI 182

Query: 184 AQDIG 188
           A+  G
Sbjct: 183 AKKAG 187


>gi|290958063|ref|YP_003489245.1| GMP synthase [Streptomyces scabiei 87.22]
 gi|260647589|emb|CBG70694.1| GMP synthase [Streptomyces scabiei 87.22]
          Length = 526

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 54/186 (29%), Gaps = 14/186 (7%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             A+   SGG DS+   +        ++  +  D+G   K E E          ++   +
Sbjct: 225 KRAICGLSGGVDSAVAAALVQKAIGSQLTCVYVDHGLMRKNETE----------QVEKDF 274

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             + G    +  A    +   +   +   K +        V  +    ++          
Sbjct: 275 VAATGVQLKVVDAEERFLKALAGVSDPEQKRKIIGREFIRVFEQAQAEIIADEGPEV--- 331

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   +               I++      L  +    +  PL  L K E   + Q++
Sbjct: 332 AFLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPEDLEFKLIEPLRKLFKDEVRMVGQEL 391

Query: 188 GGQDLV 193
           G  + +
Sbjct: 392 GLPEEI 397


>gi|255023815|ref|ZP_05295801.1| tRNA-specific 2-thiouridylase MnmA [Listeria monocytogenes FSL
           J1-208]
          Length = 291

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/185 (11%), Positives = 48/185 (25%), Gaps = 12/185 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS       ++   V  +   ++   ++  +         ++ +  +  
Sbjct: 9   RVVVGMSGGVDSSVTAHILKEQGYDVIGIFMKNWDDTDEFGVCTATEDYDDVIRVANQIG 68

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                     +    +      T  +             +     I        A  LG 
Sbjct: 69  IPYYA-----VNFEKEYWDKVFTYFLDEYKLGRTPNPDVMC-NKEIKFKAFLEHAESLGA 122

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +  G          +        +          L  +    V  PL  ++K E  ++
Sbjct: 123 DYVATGHYAQVKKVGDEIELLRGVDNNKDQTYFLNQLSQDQLKKVMFPLGGMEKTEVREI 182

Query: 184 AQDIG 188
           A+  G
Sbjct: 183 AKKAG 187


>gi|290893871|ref|ZP_06556849.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria monocytogenes FSL J2-071]
 gi|290556588|gb|EFD90124.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria monocytogenes FSL J2-071]
          Length = 371

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/185 (11%), Positives = 48/185 (25%), Gaps = 12/185 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS       ++   V  +   ++   ++  +         ++ +  +  
Sbjct: 9   RVVVGMSGGVDSSVTAHILKEQGYDVIGIFMKNWDDTDEFGVCTATEDYDDVIRVANQIG 68

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                     +    +      T  +             +     I        A  LG 
Sbjct: 69  IPYYA-----VNFEKEYWDKVFTYFLDEYKLGRTPNPDVMC-NKEIKFKAFLEHAESLGA 122

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +  G          +        +          L  +    V  PL  ++K E  ++
Sbjct: 123 DYVATGHYAQVKKVGDEIELLRGVDNNKDQTYFLNQLSQDQLKKVMFPLGGMEKTEVREI 182

Query: 184 AQDIG 188
           A+  G
Sbjct: 183 AKKAG 187


>gi|269214555|ref|ZP_05986816.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria lactamica ATCC 23970]
 gi|269209446|gb|EEZ75901.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria lactamica ATCC 23970]
          Length = 367

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 46/191 (24%), Gaps = 11/191 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN       + ++  SGG DSS   +    +  +V  +     + +  +  C +      
Sbjct: 1   MN-TTSDPSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWEDDDNDEYCSIKQ---- 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +       +      + +          +      +      PN  V     I      
Sbjct: 56  -DSFDAIAVADIVGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLCNAEIKFKCFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A   G   I  G                              L          PL  L
Sbjct: 115 DYAVGQGADTIATGHYARKEVCNGVHYLLKGLDRNKDQSYFLYRLKPFQLERAIFPLGGL 174

Query: 176 KKYETWKLAQD 186
           +K E  +LA +
Sbjct: 175 EKPEVRRLAAE 185


>gi|224011487|ref|XP_002295518.1| ASSY [Thalassiosira pseudonana CCMP1335]
 gi|209583549|gb|ACI64235.1| ASSY [Thalassiosira pseudonana CCMP1335]
          Length = 418

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 44/167 (26%), Gaps = 4/167 (2%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV--RKKIVELMP 65
            P  +L +SGG D+S  L W  ++   V     D GQ ++     +        +  ++ 
Sbjct: 6   KPKVVLAYSGGLDTSVILKWLCEKGFDVIAFCADVGQHHEDFEAVKAKAVSCGALKCIVT 65

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +     ++I        I         ++      +    V         + A  A  
Sbjct: 66  DLRKDFVSNYIFEALKCNAIYEGRYLLGTSVARP--CIAKEMVRIAAEEGASYVAHGATG 123

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
            G   +   +C                A       G    +   T  
Sbjct: 124 KGNDQVRFEMCAQALDAKIKTIAPWRDAEFIESFKGRSDLLAYCTKH 170


>gi|58337130|ref|YP_193715.1| tRNA-specific 2-thiouridylase MnmA [Lactobacillus acidophilus NCFM]
 gi|227903706|ref|ZP_04021511.1| tRNA-methyltransferase [Lactobacillus acidophilus ATCC 4796]
 gi|73920126|sp|Q5FKU0|MNMA_LACAC RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|58254447|gb|AAV42684.1| tRNA-methyltransferase [Lactobacillus acidophilus NCFM]
 gi|227868593|gb|EEJ76014.1| tRNA-methyltransferase [Lactobacillus acidophilus ATCC 4796]
          Length = 375

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 51/193 (26%), Gaps = 14/193 (7%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIV 61
           ++  +    ++  SGG DSS        +   V  +   ++   +   +       + + 
Sbjct: 1   MVDNSKIRVVVGMSGGVDSSVSALLLKQQGYDVVGVFMKNWDDTDDSGVCTATEDYEDVK 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           ++  K                       + +    + +    PN  V   + I       
Sbjct: 61  KVADKIGIPYYS------INFEKEYWHRVFEYFLDEYKKGRTPNPDVMCNSQIKFKSFLE 114

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTI------RAIETAINLGMESHVTVHTPLMWL 175
            A  L    I +G      +      H                 L  +    V  PL  L
Sbjct: 115 FAMDLDADYIAMGHYAKTITDANGVTHMMRPKDGNKDQTYFLSQLSQDQIKKVIFPLANL 174

Query: 176 KKYETWKLAQDIG 188
            K +  ++A   G
Sbjct: 175 TKPQVREIALANG 187


>gi|46907740|ref|YP_014129.1| tRNA-specific 2-thiouridylase MnmA [Listeria monocytogenes serotype
           4b str. F2365]
 gi|226224113|ref|YP_002758220.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria monocytogenes Clip81459]
 gi|254824429|ref|ZP_05229430.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria monocytogenes FSL J1-194]
 gi|254852136|ref|ZP_05241484.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria monocytogenes FSL R2-503]
 gi|254931447|ref|ZP_05264806.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria monocytogenes HPB2262]
 gi|254993966|ref|ZP_05276156.1| tRNA-specific 2-thiouridylase MnmA [Listeria monocytogenes FSL
           J2-064]
 gi|300764822|ref|ZP_07074812.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria monocytogenes FSL N1-017]
 gi|67461977|sp|Q71ZF8|MNMA_LISMF RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|259495831|sp|C1KVF9|MNMA_LISMC RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|46881009|gb|AAT04306.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria monocytogenes serotype 4b str. F2365]
 gi|225876575|emb|CAS05284.1| Putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria monocytogenes serotype 4b str. CLIP 80459]
 gi|258605439|gb|EEW18047.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria monocytogenes FSL R2-503]
 gi|293582998|gb|EFF95030.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria monocytogenes HPB2262]
 gi|293593665|gb|EFG01426.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria monocytogenes FSL J1-194]
 gi|300514498|gb|EFK41555.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria monocytogenes FSL N1-017]
 gi|328465550|gb|EGF36779.1| tRNA-specific 2-thiouridylase MnmA [Listeria monocytogenes 1816]
 gi|328474873|gb|EGF45673.1| tRNA-specific 2-thiouridylase MnmA [Listeria monocytogenes 220]
 gi|332311954|gb|EGJ25049.1| tRNA-specific 2-thiouridylase mnmA [Listeria monocytogenes str.
           Scott A]
          Length = 371

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/185 (11%), Positives = 48/185 (25%), Gaps = 12/185 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS       ++   V  +   ++   ++  +         ++ +  +  
Sbjct: 9   RVVVGMSGGVDSSVTAHILKEQGYDVIGIFMKNWDDTDEFGVCTATEDYDDVIRVANQIG 68

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                     +    +      T  +             +     I        A  LG 
Sbjct: 69  IPYYA-----VNFEKEYWDKVFTYFLDEYKLGRTPNPDVMC-NKEIKFKAFLEHAESLGA 122

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +  G          +        +          L  +    V  PL  ++K E  ++
Sbjct: 123 DYVATGHYAQVKKVGDEIELLRGVDNNKDQTYFLNQLSQDQLKKVMFPLGGMEKTEVREI 182

Query: 184 AQDIG 188
           A+  G
Sbjct: 183 AKKAG 187


>gi|329954114|ref|ZP_08295209.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides clarus YIT 12056]
 gi|328528091|gb|EGF55071.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides clarus YIT 12056]
          Length = 350

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 48/189 (25%), Gaps = 16/189 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      LL  SGG DSS       +    V  ++F                 + + +  
Sbjct: 1   MNSKERVLLGMSGGTDSSVTAMKLQEAGYEVTGVTFR--------FYEADGKAEYLED-A 51

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
               D LG +HI+       +    + +    +    + P   +   N +     A +A 
Sbjct: 52  RTLADRLGIEHII--YDARKLFRERIIRYFIDEYLAGHTPVPCILCNNELKWKLLAEIAD 109

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM-----WLKKYE 179
             GI  I  G                    +      +          M      + K E
Sbjct: 110 EKGIYWISTGHYVRKLLLEDTYYIAPAADRDKDQTFFLWGLKQDILKRMLLPMGDMTKEE 169

Query: 180 TWKLAQDIG 188
               A   G
Sbjct: 170 ARAYAAGRG 178


>gi|254493722|ref|ZP_05106893.1| tRNA(Ile)-lysidine synthetase [Neisseria gonorrhoeae 1291]
 gi|268598934|ref|ZP_06133101.1| tRNA(Ile)-lysidine synthetase [Neisseria gonorrhoeae MS11]
 gi|268603613|ref|ZP_06137780.1| tRNA(Ile)-lysidine synthase [Neisseria gonorrhoeae PID1]
 gi|268682089|ref|ZP_06148951.1| tRNA(Ile)-lysidine synthetase [Neisseria gonorrhoeae PID332]
 gi|268684299|ref|ZP_06151161.1| tRNA(Ile)-lysidine synthase [Neisseria gonorrhoeae SK-92-679]
 gi|268686557|ref|ZP_06153419.1| tRNA(Ile)-lysidine synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|293399092|ref|ZP_06643257.1| cell cycle protein MesJ [Neisseria gonorrhoeae F62]
 gi|226512762|gb|EEH62107.1| tRNA(Ile)-lysidine synthetase [Neisseria gonorrhoeae 1291]
 gi|268583065|gb|EEZ47741.1| tRNA(Ile)-lysidine synthetase [Neisseria gonorrhoeae MS11]
 gi|268587744|gb|EEZ52420.1| tRNA(Ile)-lysidine synthase [Neisseria gonorrhoeae PID1]
 gi|268622373|gb|EEZ54773.1| tRNA(Ile)-lysidine synthetase [Neisseria gonorrhoeae PID332]
 gi|268624583|gb|EEZ56983.1| tRNA(Ile)-lysidine synthase [Neisseria gonorrhoeae SK-92-679]
 gi|268626841|gb|EEZ59241.1| tRNA(Ile)-lysidine synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|291610506|gb|EFF39616.1| cell cycle protein MesJ [Neisseria gonorrhoeae F62]
          Length = 436

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/196 (11%), Positives = 42/196 (21%), Gaps = 31/196 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
               +  SGG DS   L              E L   +G                     
Sbjct: 22  KKTAVALSGGLDSVVLLHLLVCAGKRAGFVPEALHIHHG-----LSPRADDWADFCRNYC 76

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L    +        I  ++  K  A   +           R+     F   +A 
Sbjct: 77  DMLGVGLETVKVCVEKNGLGIEAAARQKRYAEFAEKGFDVLALAHHRDDQIETFMLAVAR 136

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G+  +                                    +  PL+   + + W  A
Sbjct: 137 GGGLRALAAMPAVRPLGENGI----------------------IWRPLLPFSRQDIWDYA 174

Query: 185 QDIGGQDLVNLILEES 200
           +  G  ++ +    ++
Sbjct: 175 RKHGLPNIEDESNTDT 190


>gi|157124722|ref|XP_001654171.1| gmp synthase [Aedes aegypti]
 gi|108882800|gb|EAT47025.1| gmp synthase [Aedes aegypti]
          Length = 684

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 59/194 (30%), Gaps = 8/194 (4%)

Query: 8   APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIV-ELM 64
               LLL SGG DS+ C +      + ++V  +  D G   K E        +++  +LM
Sbjct: 230 NSKVLLLVSGGVDSTVCAALLRTALKPEQVIAVHIDNGFMRKNESATVEKSLRELGVDLM 289

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP---NTFVPGRNIIFLVFAAT 121
            K            + + G + +            ++      + FV   N I       
Sbjct: 290 MKDALYQFTRGTTTIKVPGSLYNQDTPMLCQTTSPEDKRKIIGDVFVKVSNEIIKDLNLN 349

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYE 179
                     +        S     + DTI+       L  +      V  PL    K E
Sbjct: 350 ADEVFLAQGTLRPDLIESASTLVSTKADTIKTHHNDTELIRQLRETGRVIEPLQDFHKDE 409

Query: 180 TWKLAQDIGGQDLV 193
             +L  ++G    V
Sbjct: 410 VRQLGYELGLPAHV 423


>gi|78224592|ref|YP_386339.1| thiamine biosynthesis protein [Geobacter metallireducens GS-15]
 gi|78195847|gb|ABB33614.1| Thiamine biosynthesis protein [Geobacter metallireducens GS-15]
          Length = 334

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 5/82 (6%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-----DYGQRNKVELECRLCVRKKIV 61
              AL L SGG DS+  +   L++   VE L+F         +N       + V ++  
Sbjct: 1  MKRKALALLSGGLDSTLAVKVMLEQGIEVEALNFTSPFCTCTGKNAGCKSEAIRVAEEFG 60

Query: 62 ELMPKWKDSLGEDHILPLAILG 83
            +      +    ++     G
Sbjct: 61 IPIKVMHKGVDYLEVVRKPKHG 82


>gi|21911376|ref|NP_665644.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pyogenes MGAS315]
 gi|28896748|ref|NP_803098.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pyogenes SSI-1]
 gi|25091447|sp|Q8K5H5|MNMA_STRP3 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|21905592|gb|AAM80447.1| putative tRNA-(5-methylaminomethyl-2-thiouridylate) [Streptococcus
           pyogenes MGAS315]
 gi|28812002|dbj|BAC64931.1| putative tRNA-(5-methylaminomethyl-2- thiouridylate) [Streptococcus
           pyogenes SSI-1]
          Length = 373

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 52/192 (27%), Gaps = 12/192 (6%)

Query: 4   IIKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +   +   +++  SGG DSS       ++   V  +       +  +        +   +
Sbjct: 1   MTDNSKICVVVGMSGGVDSSVTALLLKEQGYDVIGVFMK--NWHDTDEFGVCTATEDYKD 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +           + +            + +    + +    PN  V     I        
Sbjct: 59  VAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDY 115

Query: 123 AYRLGITNIVIGVCET----DYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLK 176
           A  LG   +  G        +       R       +T     L  E       PL  L+
Sbjct: 116 AMTLGADYVATGHYAQVKRDENGTVHMLRGADNGKDQTYFLSQLSQEQLQKTLFPLGHLQ 175

Query: 177 KYETWKLAQDIG 188
           K E  ++A+  G
Sbjct: 176 KSEVREIAERAG 187


>gi|77464790|ref|YP_354294.1| argininosuccinate synthase [Rhodobacter sphaeroides 2.4.1]
 gi|126463633|ref|YP_001044747.1| argininosuccinate synthase [Rhodobacter sphaeroides ATCC 17029]
 gi|221640709|ref|YP_002526971.1| argininosuccinate synthase [Rhodobacter sphaeroides KD131]
 gi|332559686|ref|ZP_08414008.1| argininosuccinate synthase [Rhodobacter sphaeroides WS8N]
 gi|119361315|sp|Q3IYJ1|ASSY_RHOS4 RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|166221012|sp|A3PNQ9|ASSY_RHOS1 RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|254807530|sp|B9KPT5|ASSY_RHOSK RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|77389208|gb|ABA80393.1| argininosuccinate synthase [Rhodobacter sphaeroides 2.4.1]
 gi|126105297|gb|ABN77975.1| argininosuccinate synthase [Rhodobacter sphaeroides ATCC 17029]
 gi|221161490|gb|ACM02470.1| Argininosuccinate synthase [Rhodobacter sphaeroides KD131]
 gi|332277398|gb|EGJ22713.1| argininosuccinate synthase [Rhodobacter sphaeroides WS8N]
          Length = 408

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 43/157 (27%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W   +    V T + D GQ  ++E          +   
Sbjct: 1   MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEP--AREKAVMLGIK 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                     +  +           +      + +   ++    +  R +         A
Sbjct: 59  PENIFIEDVREEFV--RDFVFPMFRANALYEGLYLLGTSIARPLIAKRLVEIAAQTGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         + + Y       + A     +L
Sbjct: 117 VAHGATGKGNDQVRFELTAYALDPAIKVIAPWREWDL 153


>gi|289571223|ref|ZP_06451450.1| LOW QUALITY PROTEIN: tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           trmU [Mycobacterium tuberculosis T17]
 gi|289544977|gb|EFD48625.1| LOW QUALITY PROTEIN: tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           trmU [Mycobacterium tuberculosis T17]
          Length = 347

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 40/181 (22%), Gaps = 4/181 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL-MPKWK 68
             L   SGG DSS   +  +D    V  +                    K       +  
Sbjct: 2   KVLAAMSGGVDSSVAAARMVDAGHEVVGVHMALSTAPGTLRTGSRGCCSKEDAADARRVA 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D LG    +      +     +  +          PN  V     I     +  A  LG 
Sbjct: 62  DVLGIPFYVW--DFAEKFKEDVINDFVSSYARGETPNPCVRCNQQIKFAALSARAVALGF 119

Query: 129 TNIVIGVCETDYSGY-PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +  G       G                  L  +       P+    K +    A   
Sbjct: 120 DTVATGHYARLSGGRLRRAVDRDKDQSYVLAVLTAQQLRHAAFPIGDTPKRQIRAEAARR 179

Query: 188 G 188
           G
Sbjct: 180 G 180


>gi|288800069|ref|ZP_06405528.1| GMP synthase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288333317|gb|EFC71796.1| GMP synthase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 514

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 61/189 (32%), Gaps = 21/189 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +L  SGG DS+ C         +++  +  D+G   K E    +     +      
Sbjct: 213 SDRVILGLSGGVDSTVCAMLLKKAIGNQLTCIFVDHGMLRKNEFNNVMEAYSGLG----- 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                       L ++G  +     K++      +      + GR+ + +  A       
Sbjct: 268 ------------LNVIGVDASEKFFKDLEGIT--DPEQKRKIIGRDFVEVFNAEAKKIT- 312

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G    D          TI++      L  E H+ +  PL WL K E  ++  +
Sbjct: 313 DAKWLAQGTIYPDRIESLSITGMTIKSHHNVGGLPKEMHLQLCEPLQWLFKDEVRRVGYE 372

Query: 187 IGGQDLVNL 195
           +G    +  
Sbjct: 373 LGIPASLIE 381


>gi|83312118|ref|YP_422382.1| tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Magnetospirillum magneticum AMB-1]
 gi|123541366|sp|Q2W2V2|MNMA_MAGMM RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|82946959|dbj|BAE51823.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase [Magnetospirillum magneticum AMB-1]
          Length = 373

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 42/154 (27%), Gaps = 13/154 (8%)

Query: 1   MN----DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE----- 51
           MN    D    +   ++  SGG DSS   +   ++   V  ++          +E     
Sbjct: 1   MNTLDIDKPPSSTRVVVAMSGGVDSSAVAALLKEQGYDVVGVTLQLYDLATSGIEPGACR 60

Query: 52  -CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPG 110
               C  K I +            ++L      +     + +  A    +   P   +  
Sbjct: 61  PNTCCAGKDIHDARAVADALGIPHYVLD---FEETFRRDVVERFAQTYLEARTPVPCIEC 117

Query: 111 RNIIFLVFAATLAYRLGITNIVIGVCETDYSGYP 144
              +       +A  LG   +  G       G  
Sbjct: 118 NRTVKFRDLLGVAKDLGGDALATGHYVRRRPGVD 151


>gi|15610161|ref|NP_217540.1| tRNA-specific 2-thiouridylase MnmA [Mycobacterium tuberculosis
           H37Rv]
 gi|15842587|ref|NP_337624.1| tRNA-specific 2-thiouridylase MnmA [Mycobacterium tuberculosis
           CDC1551]
 gi|31794202|ref|NP_856695.1| tRNA-specific 2-thiouridylase MnmA [Mycobacterium bovis AF2122/97]
 gi|121638907|ref|YP_979131.1| tRNA-specific 2-thiouridylase MnmA [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148662876|ref|YP_001284399.1| tRNA-specific 2-thiouridylase MnmA [Mycobacterium tuberculosis
           H37Ra]
 gi|148824215|ref|YP_001288969.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycobacterium tuberculosis F11]
 gi|215405014|ref|ZP_03417195.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycobacterium tuberculosis 02_1987]
 gi|215428470|ref|ZP_03426389.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycobacterium tuberculosis T92]
 gi|215447296|ref|ZP_03434048.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycobacterium tuberculosis T85]
 gi|224991399|ref|YP_002646088.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253797879|ref|YP_003030880.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis KZN 1435]
 gi|254233657|ref|ZP_04926982.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis C]
 gi|254365655|ref|ZP_04981700.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis str. Haarlem]
 gi|254552097|ref|ZP_05142544.1| tRNA-specific 2-thiouridylase MnmA [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260188054|ref|ZP_05765528.1| tRNA-specific 2-thiouridylase MnmA [Mycobacterium tuberculosis
           CPHL_A]
 gi|260202161|ref|ZP_05769652.1| tRNA-specific 2-thiouridylase MnmA [Mycobacterium tuberculosis T46]
 gi|289444586|ref|ZP_06434330.1| tRNA methyl transferase [Mycobacterium tuberculosis T46]
 gi|289448700|ref|ZP_06438444.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis CPHL_A]
 gi|289553185|ref|ZP_06442395.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis KZN 605]
 gi|289746832|ref|ZP_06506210.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase trmU
           [Mycobacterium tuberculosis 02_1987]
 gi|289751695|ref|ZP_06511073.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis T92]
 gi|289759148|ref|ZP_06518526.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TrmU
           [Mycobacterium tuberculosis T85]
 gi|294993474|ref|ZP_06799165.1| tRNA-specific 2-thiouridylase MnmA [Mycobacterium tuberculosis 210]
 gi|297635653|ref|ZP_06953433.1| tRNA-specific 2-thiouridylase MnmA [Mycobacterium tuberculosis KZN
           4207]
 gi|297732651|ref|ZP_06961769.1| tRNA-specific 2-thiouridylase MnmA [Mycobacterium tuberculosis KZN
           R506]
 gi|306777328|ref|ZP_07415665.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis SUMu001]
 gi|306781232|ref|ZP_07419569.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis SUMu002]
 gi|306785873|ref|ZP_07424195.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis SUMu003]
 gi|306790227|ref|ZP_07428549.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis SUMu004]
 gi|306794722|ref|ZP_07433024.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis SUMu005]
 gi|306798964|ref|ZP_07437266.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis SUMu006]
 gi|306969100|ref|ZP_07481761.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis SUMu009]
 gi|306973444|ref|ZP_07486105.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis SUMu010]
 gi|307081154|ref|ZP_07490324.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis SUMu011]
 gi|307085756|ref|ZP_07494869.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis SUMu012]
 gi|313659983|ref|ZP_07816863.1| tRNA-specific 2-thiouridylase MnmA [Mycobacterium tuberculosis KZN
           V2475]
 gi|54039755|sp|P66977|MNMA_MYCBO RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|54042259|sp|P66976|MNMA_MYCTU RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|166234858|sp|A1KN20|MNMA_MYCBP RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|166235068|sp|A5U737|MNMA_MYCTA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|254811454|sp|C1AGE1|MNMA_MYCBT RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|2791622|emb|CAA16109.1| PROBABLE tRNA
           (5-METHYLAMINOMETHYL-2-THIOURIDYLATE)-METHYLTRANSFERASE
           TRMU [Mycobacterium tuberculosis H37Rv]
 gi|13882900|gb|AAK47438.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycobacterium tuberculosis CDC1551]
 gi|31619797|emb|CAD96737.1| PROBABLE tRNA
           (5-METHYLAMINOMETHYL-2-THIOURIDYLATE)-METHYLTRANSFERASE
           TRMU [Mycobacterium bovis AF2122/97]
 gi|121494555|emb|CAL73036.1| Probable tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           trmU [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124599186|gb|EAY58290.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis C]
 gi|134151168|gb|EBA43213.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis str. Haarlem]
 gi|148507028|gb|ABQ74837.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TrmU
           [Mycobacterium tuberculosis H37Ra]
 gi|148722742|gb|ABR07367.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase trmU
           [Mycobacterium tuberculosis F11]
 gi|224774514|dbj|BAH27320.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253319382|gb|ACT23985.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis KZN 1435]
 gi|289417505|gb|EFD14745.1| tRNA methyl transferase [Mycobacterium tuberculosis T46]
 gi|289421658|gb|EFD18859.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis CPHL_A]
 gi|289437817|gb|EFD20310.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis KZN 605]
 gi|289687360|gb|EFD54848.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase trmU
           [Mycobacterium tuberculosis 02_1987]
 gi|289692282|gb|EFD59711.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis T92]
 gi|289714712|gb|EFD78724.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TrmU
           [Mycobacterium tuberculosis T85]
 gi|308214222|gb|EFO73621.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis SUMu001]
 gi|308325877|gb|EFP14728.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis SUMu002]
 gi|308329399|gb|EFP18250.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis SUMu003]
 gi|308333244|gb|EFP22095.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis SUMu004]
 gi|308336898|gb|EFP25749.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis SUMu005]
 gi|308340714|gb|EFP29565.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis SUMu006]
 gi|308353256|gb|EFP42107.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis SUMu009]
 gi|308357089|gb|EFP45940.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis SUMu010]
 gi|308361042|gb|EFP49893.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis SUMu011]
 gi|308364679|gb|EFP53530.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis SUMu012]
 gi|323718255|gb|EGB27433.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis CDC1551A]
 gi|326902753|gb|EGE49686.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis W-148]
 gi|328457656|gb|AEB03079.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis KZN 4207]
          Length = 367

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 40/181 (22%), Gaps = 4/181 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL-MPKWK 68
             L   SGG DSS   +  +D    V  +                    K       +  
Sbjct: 2   KVLAAMSGGVDSSVAAARMVDAGHEVVGVHMALSTAPGTLRTGSRGCCSKEDAADARRVA 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D LG    +      +     +  +          PN  V     I     +  A  LG 
Sbjct: 62  DVLGIPFYVW--DFAEKFKEDVINDFVSSYARGETPNPCVRCNQQIKFAALSARAVALGF 119

Query: 129 TNIVIGVCETDYSGY-PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +  G       G                  L  +       P+    K +    A   
Sbjct: 120 DTVATGHYARLSGGRLRRAVDRDKDQSYVLAVLTAQQLRHAAFPIGDTPKRQIRAEAARR 179

Query: 188 G 188
           G
Sbjct: 180 G 180


>gi|303243807|ref|ZP_07330147.1| GMP synthase, large subunit [Methanothermococcus okinawensis IH1]
 gi|302485743|gb|EFL48667.1| GMP synthase, large subunit [Methanothermococcus okinawensis IH1]
          Length = 310

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 59/187 (31%), Gaps = 26/187 (13%)

Query: 8   APSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              A++  SGG DSS           DR+  +  D G   K E E    + K+ + L   
Sbjct: 21  NKKAIIALSGGVDSSVAAVLTYRAIGDRLLAVFVDTGLMRKNEAEEIYKIFKENMGL--- 77

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               + +   + L  L  +S     + +                   +F+     +A   
Sbjct: 78  -NLKIIDAKDIFLKELKGVSDPEQKRKIIG----------------RLFIEVFEEVAKEN 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   +V G              +        I L     + V  PL  L K E   LA++
Sbjct: 121 GEEVLVQGTIA-----PDWIESEGAIKTHHNIALPSGMVLEVVEPLRELYKDEVRILAKE 175

Query: 187 IGGQDLV 193
           +G  D V
Sbjct: 176 LGLPDNV 182


>gi|78777570|ref|YP_393885.1| argininosuccinate synthase [Sulfurimonas denitrificans DSM 1251]
 gi|119361342|sp|Q30QT1|ASSY_SULDN RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|78498110|gb|ABB44650.1| argininosuccinate synthase [Sulfurimonas denitrificans DSM 1251]
          Length = 404

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 4/80 (5%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI-- 60
          + ++    +L +SGG D+S  L W  D +   V T + D GQ  +VE      +   I  
Sbjct: 1  MKREVKKVVLAYSGGLDTSVILKWLQDEYKCEVVTFTADIGQGEEVEPARAKALALGIKP 60

Query: 61 -VELMPKWKDSLGEDHILPL 79
              +   ++   +D++ P+
Sbjct: 61 ENIFIDDLREEFVKDYVFPM 80


>gi|94984899|ref|YP_604263.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Deinococcus geothermalis DSM 11300]
 gi|205816613|sp|Q1J090|MNMA_DEIGD RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|94555180|gb|ABF45094.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Deinococcus geothermalis DSM 11300]
          Length = 381

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 49/199 (24%), Gaps = 18/199 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-----------E 49
           M+   K +   L   SGG DSS   +   D   +V      +   +K             
Sbjct: 1   MSGQDKASQRVLCAMSGGVDSSVTAALLKDAGYQVIGAMMRFWPDDKRVDTFDTCCSPDA 60

Query: 50  LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
                 V +++              H +    L + +                  NT V 
Sbjct: 61  AYEARRVAEQVGVPFYLLDYREQFQHHIVGPFLSEYAQGRTPNP-------CVNCNTKVK 113

Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
              ++         Y      +     E     +                   E+   + 
Sbjct: 114 FDELVKKAKMLGCRYVATGHYVKRVEREDGSVEFHRGDDPRKDQTYFLWGTPREALPFIL 173

Query: 170 TPLMWLKKYETWKLAQDIG 188
            P+  L+K    ++A + G
Sbjct: 174 FPVGELEKPRVREIAAEKG 192


>gi|321475439|gb|EFX86402.1| hypothetical protein DAPPUDRAFT_187509 [Daphnia pulex]
          Length = 410

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 3/74 (4%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          + K    +L +SGG D+S  L W +     V     + GQ    E       +   +   
Sbjct: 1  MSKNERVILAYSGGLDTSCILVWLIQEGYDVICYLANIGQN---EDFGAAEAKAMCLGAK 57

Query: 65 PKWKDSLGEDHILP 78
              + L E+ I  
Sbjct: 58 KIIIEDLRENFIDD 71


>gi|254796826|ref|YP_003081663.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neorickettsia risticii str. Illinois]
 gi|254590056|gb|ACT69418.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neorickettsia risticii str. Illinois]
          Length = 368

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 54/185 (29%), Gaps = 10/185 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
             ++  SGG DSST  ++      +V  ++      +      R        I +     
Sbjct: 17  KVMVAMSGGVDSSTVAAYLHRAGYKVIGVTLQLHSNSTSTQTNRKTCCAGSDIFDAKRVA 76

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                  +++    + +     + ++ A        P   V     +       +A  L 
Sbjct: 77  AQFGFLHYVVN---MEETFRKEVIEDFAKSYLRGETPIPCVKCNQTVKFRDLMKIAKNLS 133

Query: 128 ITNIVIGVCETDYSGY-----PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           +  +V G      +             +        N   E    +  PL  LKK ET  
Sbjct: 134 VDALVTGHYVRRLTTTNGVELHKGIDPSKDQSYFLFNTTREQLEFLRFPLGNLKKSETRD 193

Query: 183 LAQDI 187
           LA+ +
Sbjct: 194 LARKL 198


>gi|118595168|ref|ZP_01552515.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylophilales bacterium HTCC2181]
 gi|118440946|gb|EAV47573.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylophilales bacterium HTCC2181]
          Length = 369

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 58/168 (34%), Gaps = 14/168 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--------RLCVRK 58
           K  S ++  SGG DS+       D+   V  L     + +  +  C         + V +
Sbjct: 2   KGESIVVGLSGGVDSAVTAWLLKDQGYDVTALFMKNWEDDDEDEYCSSKQDLLDAIAVAE 61

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP-----GRNI 113
           KI  +  +  +   E      ++  D   + +T N  +        + F+      G + 
Sbjct: 62  KIG-VDIEVVNFAKEYKEKVFSLFIDGLKTGITPNPDILCNSEIKFDAFLNHALALGADK 120

Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
           I     A +  R G+  ++ G   +    Y   R +  +  ++   LG
Sbjct: 121 IATGHYAKVMERDGLFYLLKGDDGSKDQSYFLHRLNQDQLSKSVFPLG 168


>gi|300814306|ref|ZP_07094578.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300511573|gb|EFK38801.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 351

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/195 (12%), Positives = 54/195 (27%), Gaps = 13/195 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K    +L  SGG DSS       ++   V  +            +      +  ++++  
Sbjct: 2   KNKKVVLGMSGGVDSSVAAILLKNQGYDVIGVFMRNW-----ADDGICTATEDYMDVVKV 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 +   +      +   + +      + +    PN  V     I        A   
Sbjct: 57  ASQLGIKYFTVN---FEEEYRNQVFSYFLNEYKKGRTPNPDVMCNTEIKFKAFLNYALNF 113

Query: 127 GITNIVIGVCET--DYSGYPDCRHDTIRAIETAINLGMESHVTVH---TPLMWLKKYETW 181
               I +G      +  G            + +  L   +   +     P+  L+K +  
Sbjct: 114 DCDYIAMGHYARTKNIDGKTYLCRGLDNNKDQSYFLSRVTEDALKKTLFPIGELQKDQVR 173

Query: 182 KLAQDIGGQDLVNLI 196
           K+A+D G    +   
Sbjct: 174 KIAKDYGLSTALKKD 188


>gi|298384831|ref|ZP_06994390.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides sp. 1_1_14]
 gi|298261975|gb|EFI04840.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides sp. 1_1_14]
          Length = 362

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/192 (8%), Positives = 46/192 (23%), Gaps = 11/192 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + ++    L+  SGG DS+       ++   +  ++         E +    +  ++   
Sbjct: 1   MKERNKRVLVGMSGGIDSTATCLMLQEQGYEIVGVTMRVWGD---EPQDARELAARMGIE 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                + +     +    + +                  + N     R +         A
Sbjct: 58  HYVADERIPFKETIVKNFIDEYKQGRTPNP-------CVMCNPLFKFRVLAEWADKLDCA 110

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           Y        +                  ++      LG +       PL    K +  + 
Sbjct: 111 YIATGHYSRLEERNGHIYIVAGDDDKKDQSYF-LWRLGQDILKRCIFPLGDYTKIKVREY 169

Query: 184 AQDIGGQDLVNL 195
             + G +     
Sbjct: 170 LAEKGYEAKSKE 181


>gi|268594781|ref|ZP_06128948.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidine synthetase)
           [Neisseria gonorrhoeae 35/02]
 gi|268596895|ref|ZP_06131062.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidine synthetase)
           [Neisseria gonorrhoeae FA19]
 gi|268548170|gb|EEZ43588.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidine synthetase)
           [Neisseria gonorrhoeae 35/02]
 gi|268550683|gb|EEZ45702.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidine synthetase)
           [Neisseria gonorrhoeae FA19]
          Length = 435

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/196 (11%), Positives = 42/196 (21%), Gaps = 31/196 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
               +  SGG DS   L              E L   +G                     
Sbjct: 21  KKTAVALSGGLDSVVLLHLLVCAGKRAGFVPEALHIHHG-----LSPRADDWADFCRNYC 75

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L    +        I  ++  K  A   +           R+     F   +A 
Sbjct: 76  DMLGVGLETVKVCVEKNGLGIEAAARQKRYAEFAEKGFDVLALAHHRDDQIETFMLAVAR 135

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G+  +                                    +  PL+   + + W  A
Sbjct: 136 GGGLRALAAMPAVRPLGENGI----------------------IWRPLLPFSRQDIWDYA 173

Query: 185 QDIGGQDLVNLILEES 200
           +  G  ++ +    ++
Sbjct: 174 RKHGLPNIEDESNTDT 189


>gi|226941091|ref|YP_002796165.1| argininosuccinate synthase [Laribacter hongkongensis HLHK9]
 gi|254807526|sp|C1D9Q4|ASSY_LARHH RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|226716018|gb|ACO75156.1| AssY [Laribacter hongkongensis HLHK9]
          Length = 408

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 50/173 (28%), Gaps = 5/173 (2%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +    +L +SGG D+S  L W  D +   V T + D GQ  +VE       +K +   
Sbjct: 1   MHEVKKVVLAYSGGLDTSVILKWLQDTYQCEVVTFTADIGQGEEVEPAR----KKALALG 56

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +      + +     +         +        +   ++    +  R I         A
Sbjct: 57  IKPENIFIDDLREEFVRDFVFPMFRANAVYEGEYLLGTSIARPLIAKRQIEIANMVGAEA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
              G T         +   Y       + A     +L     +  +     + 
Sbjct: 117 VSHGATGKGNDQVRFELGYYALKPEVKVIAPWREWDLLSREKLLAYAETHGID 169


>gi|302799236|ref|XP_002981377.1| hypothetical protein SELMODRAFT_233685 [Selaginella moellendorffii]
 gi|300150917|gb|EFJ17565.1| hypothetical protein SELMODRAFT_233685 [Selaginella moellendorffii]
          Length = 533

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 55/186 (29%), Gaps = 9/186 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               A+   SGG DS+   +       DR+  +  D G     E E  +   K+ + L  
Sbjct: 226 PNEHAICALSGGVDSTVAATLVHKALGDRLHCVFVDNGLLRYKEQERVMETFKRELHLPV 285

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D+           L  +   +  +     I    +        ++   +        
Sbjct: 286 VCVDA-------STDFLSRLRGVTDPEQKRKIIGAQFISVFDKFACHLEEELGKTATFLV 338

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G     +        G       TI++      L     + +  PL WL K E  KL +
Sbjct: 339 QGTLYPDVIESCPP-PGSGKGHSHTIKSHHNVGGLPAVMKLKLLEPLKWLFKDEVRKLGK 397

Query: 186 DIGGQD 191
            +G  +
Sbjct: 398 LLGVPE 403


>gi|213420831|ref|ZP_03353897.1| thiamine biosynthesis protein ThiI [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 321

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 42/134 (31%), Gaps = 16/134 (11%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DSS      + R  RV    F+ G            +   + ++     + 
Sbjct: 180 VLSLISGGFDSSVSSYMLMRRGCRVHYCFFNLGG-------AAHEI--GVRQVAHYLWNR 230

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G  H +    +         + V  +I +             + +  A+ +A R G+  
Sbjct: 231 FGSSHRVRFVAIN-------FEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQA 283

Query: 131 IVIGVCETDYSGYP 144
           +V G      S   
Sbjct: 284 LVTGEALGQVSSQT 297


>gi|183601501|ref|ZP_02962871.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Bifidobacterium animalis subsp. lactis HN019]
 gi|219683957|ref|YP_002470340.1| GMP synthase [Bifidobacterium animalis subsp. lactis AD011]
 gi|241190999|ref|YP_002968393.1| GMP synthase [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|241196405|ref|YP_002969960.1| GMP synthase [Bifidobacterium animalis subsp. lactis DSM 10140]
 gi|183219107|gb|EDT89748.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Bifidobacterium animalis subsp. lactis HN019]
 gi|219621607|gb|ACL29764.1| GMP synthase glutamine amidotransferase [Bifidobacterium animalis
           subsp. lactis AD011]
 gi|240249391|gb|ACS46331.1| bifunctional GMP synthase/glutamineamidotransferase protein
           [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|240250959|gb|ACS47898.1| bifunctional GMP synthase/glutamineamidotransferase protein
           [Bifidobacterium animalis subsp. lactis DSM 10140]
 gi|289178740|gb|ADC85986.1| GMP synthase (glutamine-hydrolyzing) [Bifidobacterium animalis
           subsp. lactis BB-12]
 gi|295793988|gb|ADG33523.1| bifunctional GMP synthase/glutamineamidotransferase protein
           [Bifidobacterium animalis subsp. lactis V9]
          Length = 520

 Score = 50.7 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 53/185 (28%), Gaps = 11/185 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +       D++  +  D+G   K E      V+   V       
Sbjct: 217 RVICGLSGGVDSAVAAALVHRAIGDQLTCVFVDHGLLRKGE---AEQVKHDFVAATGIKL 273

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            ++          L  +   S  +     I +  +       R +I    A     +   
Sbjct: 274 IAVDASK----DFLDALKGVSDPETKRKIIGEKFIRTFEKAQRQVIEEAGAQGKEVK--- 326

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +    +  PL  L K E   +  ++G
Sbjct: 327 FLVQGTLYPDVVESGGGDGASNIKSHHNVGGLPDDIKFELIEPLRSLFKDEVRAIGTELG 386

Query: 189 GQDLV 193
             D +
Sbjct: 387 LPDEI 391


>gi|332666122|ref|YP_004448910.1| Argininosuccinate synthase [Haliscomenobacter hydrossis DSM 1100]
 gi|332334936|gb|AEE52037.1| Argininosuccinate synthase [Haliscomenobacter hydrossis DSM 1100]
          Length = 397

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 2/72 (2%)

Query: 5  IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
          +      +L +SGG D S   L    D+   V  L+ D G  +  +L+       ++   
Sbjct: 1  MSNH-KVVLAYSGGLDTSFCILHLTKDKGLEVHALTVDTGGFSAEQLKTMEERALQLGAK 59

Query: 64 MPKWKDSLGEDH 75
            +  ++L + +
Sbjct: 60 SFRVANALHDYY 71


>gi|309378502|emb|CBX22855.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 383

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 46/191 (24%), Gaps = 11/191 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN       + ++  SGG DSS   +    +  +V  +     + +  +  C +      
Sbjct: 17  MN-TTSNPSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWEDDDNDEYCSIKQ---- 71

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +       +      + +          +      +      PN  V     I      
Sbjct: 72  -DSFDAIAVADIVGIDIDIVNFAAQYKDKVFAYFLKEYSAGRTPNPDVLCNAEIKFKCFL 130

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A   G   I  G                              L          PL  L
Sbjct: 131 DYAVGQGADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLKPFQLERAIFPLGGL 190

Query: 176 KKYETWKLAQD 186
           +K E  +LA +
Sbjct: 191 EKPEVRRLAAE 201


>gi|84498222|ref|ZP_00997019.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Janibacter sp. HTCC2649]
 gi|84381722|gb|EAP97605.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Janibacter sp. HTCC2649]
          Length = 374

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/147 (11%), Positives = 33/147 (22%), Gaps = 5/147 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR--KKIVELMPKW 67
             +   SGG DS+   +  LD    V  +     +      E        +   +     
Sbjct: 2   RVVAAMSGGVDSAVAAARMLDAGHEVVGVHLALSRSAATLRESARGCCTIEDAGDARRVA 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                  ++     + +     +  +   + Q    PN  +     I        A  LG
Sbjct: 62  DRLGIPFYVWD---MAERFQRDVMDDFVAEYQAGRTPNPCLRCNESIKFAALLDRAVALG 118

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAI 154
              +  G                    
Sbjct: 119 FDAVATGHYAQIVERVDAEGVTHRELH 145


>gi|315612257|ref|ZP_07887171.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus sanguinis ATCC 49296]
 gi|315315650|gb|EFU63688.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus sanguinis ATCC 49296]
          Length = 415

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 51/194 (26%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 43  MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 98

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 99  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 155

Query: 121 TLAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 156 DYAMTLGADYVATGHYARVARDEDGIVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 215

Query: 175 LKKYETWKLAQDIG 188
           L+K E  KLA++ G
Sbjct: 216 LEKPEVRKLAEEAG 229


>gi|309775351|ref|ZP_07670356.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916868|gb|EFP62603.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Erysipelotrichaceae bacterium 3_1_53]
          Length = 386

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/193 (11%), Positives = 56/193 (29%), Gaps = 14/193 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVEL-- 63
            +   LL  SGG DS+       ++   V      ++      ++     ++  +     
Sbjct: 1   MSQKVLLGLSGGVDSAVAAYLLKEQGYDVTCAFMRNWDSFANNDIMGNPTIQDDVCPQEQ 60

Query: 64  ----MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                 +  D LG   +L +  + +      T  +    +        +     I     
Sbjct: 61  DYLDAKEVADRLGLP-LLRVDFVKEYWDHVFTYFLDEYRKGRTPNPDILC-NKYIKFDAF 118

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRH-----DTIRAIETAINLGMESHVTVHTPLMW 174
              A +LG   +  G          + R                 +  ++      P+  
Sbjct: 119 MNYARKLGFDVLATGHYAQVDHSGKESRMLRGADSNKDQTYFLCQVSQDALRHSMFPIGH 178

Query: 175 LKKYETWKLAQDI 187
           ++K+E  ++A+ +
Sbjct: 179 MEKHEVREIAERM 191


>gi|221119829|ref|XP_002168506.1| PREDICTED: similar to guanine monphosphate synthetase, partial
           [Hydra magnipapillata]
          Length = 652

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 58/205 (28%), Gaps = 12/205 (5%)

Query: 1   MNDIIKKAPS--ALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCV 56
           MN+I +       L L SGG DS+ C          +RV  +  D G   K E E    +
Sbjct: 187 MNEIREAVGKNNVLSLVSGGVDSTVCTILLQKAIGVERVIAVHIDNGFLRKDESEKVKQL 246

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP------NTFVPG 110
            +     +  + +     H          + +   +   +    +         +TF+  
Sbjct: 247 YEYHGLKLHVYNEKHHFLHSSTRIPKKTETGTVNIQVGPLHSVTDPEEKRKIIGDTFIEV 306

Query: 111 RNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TV 168
              I           L     +        S        TI+      N+  +      +
Sbjct: 307 CERILNDLKLDPETTLLAQGTLRPDLIESASHLASGNACTIKTHHNDTNMVRQLREKGRI 366

Query: 169 HTPLMWLKKYETWKLAQDIGGQDLV 193
             PL    K E   L + +G    +
Sbjct: 367 VEPLKDFHKDEVRALGRQLGVPHAL 391


>gi|253582177|ref|ZP_04859400.1| tRNA-specific 2-thiouridylase mnmA 1 [Fusobacterium varium ATCC
           27725]
 gi|251835716|gb|EES64254.1| tRNA-specific 2-thiouridylase mnmA 1 [Fusobacterium varium ATCC
           27725]
          Length = 362

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 53/189 (28%), Gaps = 17/189 (8%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D   +  +  +  SGG DSST       +   V  ++       K E      V   +
Sbjct: 16  MYDENNQNTTIAVAMSGGVDSSTVAYLLKKQGYNVFGITMK---TCKPEDSDAKKVCDDL 72

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                         ++L +             +          PN  +     I L    
Sbjct: 73  G----------IPYYLLDVTKEFKEKVMDYFVDE---YLKGKTPNPCMVCNKYIKLGLLI 119

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM-WLKKYE 179
             A   G   +  G       G      D  +     ++   + ++      +  L+K +
Sbjct: 120 DFARSKGADFMATGHYTQMKDGILSMGDDAGKDQVYFLSQMKKENLKYLKFPIGNLEKPK 179

Query: 180 TWKLAQDIG 188
             +LAQ +G
Sbjct: 180 VRELAQLLG 188


>gi|217077171|ref|YP_002334887.1| GMP synthase [Thermosipho africanus TCF52B]
 gi|226739758|sp|B7IHI2|GUAA_THEAB RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|217037024|gb|ACJ75546.1| GMP synthase: glutamine-hydrolyzing [Thermosipho africanus TCF52B]
          Length = 513

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 53/188 (28%), Gaps = 14/188 (7%)

Query: 8   APSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS                +  D G     E +      +K+      
Sbjct: 212 NDKVILGLSGGVDSSVVALLLDKAIGKNSIPIFVDTGLLRLNERQEVEENFRKLG----- 266

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               + +     L+ L  +      ++   K +        V     + L+        L
Sbjct: 267 IDIVVVDAKERFLSNLKGV------EDPEEKRKIIGHTFIDVFYEASMKLLEKHGNIKYL 320

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   + E+  S         I+       L  +    +  P  +L K E  K+ + 
Sbjct: 321 AQGTLYPDIIESKVSERK--AAAKIKTHHNVGGLPEKLPFKIIEPFRYLFKDEVRKIGKI 378

Query: 187 IGGQDLVN 194
           +G  D + 
Sbjct: 379 LGLPDEMI 386


>gi|262306009|gb|ACY45597.1| gln amidotransferase [Amblyomma sp. 'Amb2']
          Length = 196

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 2/63 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +      R D+V  L  D G   K E        +++   +   
Sbjct: 45  KVLMLVSGGVDSTVCAALLHKALREDQVIALHIDNGFMRKDESVQVEQSLRQLGLSLRMV 104

Query: 68  KDS 70
             S
Sbjct: 105 DAS 107


>gi|152981022|ref|YP_001352063.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Janthinobacterium sp. Marseille]
 gi|205816857|sp|A6SUW6|MNMA_JANMA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|151281099|gb|ABR89509.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Janthinobacterium sp. Marseille]
          Length = 372

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 32/131 (24%), Gaps = 5/131 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS       ++   V  L     + +     C     +  ++     
Sbjct: 3   KKRVVIGMSGGVDSSVSAWLLKEQGYEVIGLFMKNWEDDDDSEYCSTR--QDWIDAASVA 60

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                +   +            +      + Q    PN  V     I        A  LG
Sbjct: 61  DVVGVD---IEAVNFASEYKDRVFAEFLREYQAGRTPNPDVLCNAEIKFKAFLDHAMLLG 117

Query: 128 ITNIVIGVCET 138
              I  G    
Sbjct: 118 ADMIATGHYAR 128


>gi|134045270|ref|YP_001096756.1| PP-loop domain-containing protein [Methanococcus maripaludis C5]
 gi|132662895|gb|ABO34541.1| PP-loop domain protein [Methanococcus maripaludis C5]
          Length = 324

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 67/238 (28%), Gaps = 25/238 (10%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRLCVR 57
           N+II      L+  SGG+DS   L            ++  ++ D                
Sbjct: 69  NNIISPKDKILVGLSGGKDSLALLHLLEPYRRKYGVQIYAVTVDLNINGIRPWTESNKNV 128

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           K I E             I+     G++   S   +   K  + +   +    R  +   
Sbjct: 129 KMISEHCKNLN---IPHEIIAHD--GNVVEMSKILSENTKGIEYSPCFSCSMVRRHVLTN 183

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIR--AIETAINLGMESHVTVHTPLMWL 175
           +A           I IG    D S                  I    ++ V      + L
Sbjct: 184 YAKNNFESDSNVKIAIGHTLEDNSDTIMANIFKGNVIKALEPIKNFNKTDVDFKDFKLNL 243

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTC----YLGKRDKRYEWGYGCNSCPACYLRQK 229
           K     +   ++  + +V  ++E    C    Y  K +  Y    G        +R+K
Sbjct: 244 KSCCMIRPMLNVSEEKIVKALVE----CDIEYYKDKDECPYSRHNGDG------IRKK 291


>gi|160112811|sp|Q9X2V9|MCJC_ECOLX RecName: Full=Microcin J25-processing protein mcjC
 gi|78322019|emb|CAJ40934.1| microcin J25 processing protein [Escherichia coli]
          Length = 513

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 23/69 (33%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           ++++      LLFSGG DS+       +  ++     F   + +  E         K   
Sbjct: 186 EMMRDNRKIALLFSGGLDSALIFHTLKESGNKFCAYHFFSDESDDSEKYFAKEYCSKYGV 245

Query: 63  LMPKWKDSL 71
                  ++
Sbjct: 246 DFISVNKNI 254


>gi|34557924|ref|NP_907739.1| GMP synthase [Wolinella succinogenes DSM 1740]
 gi|44887990|sp|Q7M8K2|GUAA_WOLSU RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|34483642|emb|CAE10639.1| GMP SYNTHASE [Wolinella succinogenes]
          Length = 521

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 56/185 (30%), Gaps = 18/185 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K+   L   SGG DSS   +       +++  +  D+G     E E    V K   E + 
Sbjct: 223 KSGKVLCAVSGGVDSSVVAALLYRAIGEKLIPVFVDHGLLRAGEREA---VEKMFKENLH 279

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
               ++    I     LG +   S  +     I +  +    V  +    + + A     
Sbjct: 280 VPLITVDASEI----FLGKLKGVSDPETKRKIIGETFIEVFDVEAKKHDGIQYLA----- 330

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                      +   S        TI++      L       +  PL  L K E   L  
Sbjct: 331 -----QGTLYPDVIESVSVKGPSKTIKSHHNVGGLPDWMTFELIEPLRELFKDEVRALGA 385

Query: 186 DIGGQ 190
           ++G  
Sbjct: 386 ELGMP 390


>gi|4731434|gb|AAD28496.1|AF061787_3 McjC [Escherichia coli]
          Length = 442

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 23/69 (33%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           ++++      LLFSGG DS+       +  ++     F   + +  E         K   
Sbjct: 186 EMMRDNRKIALLFSGGLDSALIFHTLKESGNKFCAYHFFSDESDDSEKYFAKEYCSKYGV 245

Query: 63  LMPKWKDSL 71
                  ++
Sbjct: 246 DFISVNKNI 254


>gi|265767771|ref|ZP_06095303.1| tRNA methyl transferase [Bacteroides sp. 2_1_16]
 gi|263252443|gb|EEZ23971.1| tRNA methyl transferase [Bacteroides sp. 2_1_16]
          Length = 362

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/192 (10%), Positives = 54/192 (28%), Gaps = 21/192 (10%)

Query: 5   IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +K++   +L+  SGG DS+       ++   +  ++         E +    +  ++   
Sbjct: 1   MKESKKRVLVGMSGGIDSTATCMMLQEQGYEIVGVTMRVWGD---EPQDARELAARMGIE 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                + +   + +    +              + +    PN  V    +         A
Sbjct: 58  HYVADERVPFKNTIVKNFI-------------DEYRQGRTPNPCVMCNPLFKFRMLIEWA 104

Query: 124 YRLGITNI----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            +LG   I       + E +   Y     D  +     +    +  +      +     +
Sbjct: 105 DKLGCDWIATGHYSRLEERNGHIYIVAGDDDKKDQSYFLWRLGQDVLRRCIFPLGNYTKQ 164

Query: 180 TWKLAQDIGGQD 191
           T +      G +
Sbjct: 165 TVRDYLREKGYE 176


>gi|260429185|ref|ZP_05783162.1| argininosuccinate synthase [Citreicella sp. SE45]
 gi|260419808|gb|EEX13061.1| argininosuccinate synthase [Citreicella sp. SE45]
          Length = 406

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 4/78 (5%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
          +      +L +SGG D+S  L W   +    V T + D GQ  ++E        + +  +
Sbjct: 1  MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEP--ARKKAEMLG-V 57

Query: 64 MPKWKDSLGEDHILPLAI 81
             + + L E+ +     
Sbjct: 58 SKVYIEDLREEFVRDFVF 75


>gi|212638074|ref|YP_002314594.1| GMP synthase [Anoxybacillus flavithermus WK1]
 gi|212559554|gb|ACJ32609.1| GMP synthetase [Anoxybacillus flavithermus WK1]
          Length = 511

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 57/186 (30%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 217 KKVLCALSGGVDSSVAAVLVHRAIGDQLTCIFVDHGLLRKGE---ADSVMKTFRE----- 268

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G    +      +   + L      + +   + N F+   +          A   G
Sbjct: 269 ----GFHMNVIKVDAKERFLNKLKGVSDPEQKRKIIGNEFIYVFDDEA-------AKLDG 317

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +V G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 318 IEFLVQGTLYTDIIESGTATAQTIKSHHNVGGLPEDMKFKLIEPLNTLFKDEVRALGTEL 377

Query: 188 GGQDLV 193
           G  D +
Sbjct: 378 GIPDEI 383


>gi|195034678|ref|XP_001988949.1| GH10300 [Drosophila grimshawi]
 gi|193904949|gb|EDW03816.1| GH10300 [Drosophila grimshawi]
          Length = 693

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 55/194 (28%), Gaps = 8/194 (4%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIV-ELM 64
               LLL SGG DSS C +         ++  +  D G   K E E      + I  EL+
Sbjct: 228 NNKVLLLVSGGVDSSVCAALLRRALHPSQIIAVHVDNGFMRKNESEQVERSLRDIGIELI 287

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP---NTFVPGRNIIFLVFAAT 121
            + +          +   G  S             +       + FV   N +       
Sbjct: 288 VRKEGYTFLKGTTQVKRPGQYSVVETPMLCQTYNPEEKRKIIGDIFVKVTNEVVAELKLK 347

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYE 179
               L     +        S       +TI+      +L  E      V  PL    K E
Sbjct: 348 PEEVLLAQGTLRPDLIESASNMVSTNAETIKTHHNDTDLIRELRNAGRVVEPLSDFHKDE 407

Query: 180 TWKLAQDIGGQDLV 193
              L  D+G    +
Sbjct: 408 VRDLGNDLGLPAEL 421


>gi|224418823|ref|ZP_03656829.1| argininosuccinate synthase [Helicobacter canadensis MIT 98-5491]
 gi|253828188|ref|ZP_04871073.1| argininosuccinate synthase [Helicobacter canadensis MIT 98-5491]
 gi|313142341|ref|ZP_07804534.1| argininosuccinate synthase [Helicobacter canadensis MIT 98-5491]
 gi|253511594|gb|EES90253.1| argininosuccinate synthase [Helicobacter canadensis MIT 98-5491]
 gi|313131372|gb|EFR48989.1| argininosuccinate synthase [Helicobacter canadensis MIT 98-5491]
          Length = 405

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 45/160 (28%), Gaps = 5/160 (3%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           +  K     +L +SGG D+S  L W  D     V T + D GQ  +VE      +  K+ 
Sbjct: 2   EKTKDIKKVVLAYSGGLDTSVILKWLGDTYGCEVVTFTADIGQGEEVEPARAKAL--KLG 59

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                       +  +           + T      +   ++    +  R +        
Sbjct: 60  IKPQNIFIDDLREEFI--RDFVFPMFRANTIYEGEYLLGTSIARPLIAKRLVEIAREVGA 117

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
            A   G T         +   Y       + A     +L 
Sbjct: 118 DAIAHGATGKGNDQVRFELGAYALNPDIKVIAPWREWDLN 157


>gi|205829096|sp|B1XM11|MNMA_SYNP2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 353

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 50/186 (26%), Gaps = 17/186 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +  SGG DSS        +   VE ++        +      C  + +V+     + 
Sbjct: 3   KVAVGLSGGVDSSVTAGILHRQGYTVEGVTL------WLMKGKGQCCSEGMVDAADICEQ 56

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY-RLGI 128
                HI+    L           V    +    P        ++        A   LGI
Sbjct: 57  LGIPHHIVDSRDLFQKYIVDY---VVSGYEVGVTPLPCSQCNRMVKFGPMLQWAKAELGI 113

Query: 129 TNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
             I  G            R+                 +L  E       PL  + K ET 
Sbjct: 114 DQIATGHYARIRYNDQTGRYELLRAVDRHKDQSYFLYDLTQEMLAGTLFPLGEMTKGETR 173

Query: 182 KLAQDI 187
           ++A ++
Sbjct: 174 QIAAEM 179


>gi|14520772|ref|NP_126247.1| hypothetical protein PAB1992 [Pyrococcus abyssi GE5]
 gi|5457988|emb|CAB49478.1| Predicted ATPase of the PP-loop superfamily [Pyrococcus abyssi
          GE5]
          Length = 260

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
              LLLFSGG+DSS  L    +    V  L+F
Sbjct: 20 EKKVLLLFSGGKDSSLALYILKEAGYDVSALTF 52


>gi|237738366|ref|ZP_04568847.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Fusobacterium mortiferum ATCC 9817]
 gi|229420246|gb|EEO35293.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Fusobacterium mortiferum ATCC 9817]
          Length = 333

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 3/55 (5%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVET---LSFDYGQRNKVELECRLCV 56
          ++K   AL LFSGG DS+  +    D+   V     +S  +G +N+   +    +
Sbjct: 1  MEKKRRALALFSGGLDSALAIKVIKDQGIDVIALNFVSHFFGGKNEKAEKMAEQL 55


>gi|194379662|dbj|BAG58183.1| unnamed protein product [Homo sapiens]
          Length = 328

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/113 (11%), Positives = 29/113 (25%), Gaps = 9/113 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--------QRNKVELECRLCV 56
           ++     +   SGG DS+        R  +V  +                  + E    V
Sbjct: 1   MQALRHVVCALSGGVDSAVAALLLRRRGYQVTGVFMKNWDSLDEHGVCTADKDCEDAYRV 60

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
            + +     +    + E      +   +      T N  +    +   + F  
Sbjct: 61  CQILDIPFHQVS-YVKEYWNDVFSDFLNEYEKGRTPNPDIVCNKHIKFSCFFH 112


>gi|70726299|ref|YP_253213.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus haemolyticus
           JCSC1435]
 gi|123660380|sp|Q4L6W8|MNMA_STAHJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|68447023|dbj|BAE04607.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Staphylococcus haemolyticus JCSC1435]
          Length = 370

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 47/189 (24%), Gaps = 11/189 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  K    ++  SGG DSS       D+   V  +             C     +   ++
Sbjct: 1   MSNKDIRVVVGMSGGVDSSVTAHVLKDQGYDVIGIFMKNWDDTDENGVC--TATEDYNDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +          + +            +      + +    PN  V     I        A
Sbjct: 59  IAVCNQIGIPYYAVN---FEQEYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLEHA 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLKK 177
            +LG   +  G                               L  +    V  P+  + K
Sbjct: 116 LKLGADYVATGHYARIRRHDDGHVEMLRGVDNNKDQTYFLNQLSQQQLSKVMFPIGDIDK 175

Query: 178 YETWKLAQD 186
            E  K+A++
Sbjct: 176 KEVRKIAEE 184


>gi|330958166|gb|EGH58426.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 366

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 35/137 (25%), Gaps = 5/137 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS      +++  +VE L     + +     C    R+ + +      
Sbjct: 2   KRVIVGMSGGVDSSVSAVLLMEQGYQVEGLFMKNWEEDDGTEYC--TAREDLADAQAVCD 59

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + H        +   +     +             +  R  I        A  LG 
Sbjct: 60  KIGIKLHT--ANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFKAFLDYALMLGA 116

Query: 129 TNIVIGVCETDYSGYPD 145
             I  G           
Sbjct: 117 DLIATGHYVRRRDTDGH 133


>gi|156551429|ref|XP_001604269.1| PREDICTED: similar to gmp synthase [Nasonia vitripennis]
          Length = 710

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 22/63 (34%), Gaps = 2/63 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               LLL SGG DS+ C +        D+V  +  + G   K E         +I   + 
Sbjct: 240 NSKVLLLVSGGVDSTVCAALLHKALNKDQVIAVHINNGFMRKGETPLVEQSLAQIGIKLQ 299

Query: 66  KWK 68
              
Sbjct: 300 VIN 302


>gi|110835125|ref|YP_693984.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Alcanivorax borkumensis SK2]
 gi|110648236|emb|CAL17712.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Alcanivorax borkumensis SK2]
          Length = 361

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 59/185 (31%), Gaps = 4/185 (2%)

Query: 1   MNDIIKKAPS-ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ---RNKVELECRLCV 56
           M +  +     A+ L SGG DS   +    D+   VE ++F  G     +   +  +   
Sbjct: 1   MTEASQPIKRRAIALVSGGLDSMLAVKVMQDQGIEVEGVNFYTGFCVEGHTHAIRKKDKD 60

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
           ++K    +   +    + HI+ ++        +        +        F+  +  + +
Sbjct: 61  KEKRNNALWVAEQLGIKMHIIDISEEYKDVVLNPKHGYGANLNPCLDCKIFMVNQATLMI 120

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
             A  LA   G   IV G                I + E+  +  +   +        L 
Sbjct: 121 NKARELAGDRGFDFIVTGEVIGQRPKSQRKETMPIISQESGADDRLLRPLCAKNLPPTLP 180

Query: 177 KYETW 181
           + E W
Sbjct: 181 EREGW 185


>gi|313668289|ref|YP_004048573.1| hypothetical protein NLA_9780 [Neisseria lactamica ST-640]
 gi|313005751|emb|CBN87205.1| hypothetical protein NLA_9780 [Neisseria lactamica 020-06]
          Length = 445

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/200 (12%), Positives = 49/200 (24%), Gaps = 32/200 (16%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKI 60
           + +  +A+ L SGG DS   L   +    +     E +   +G                 
Sbjct: 28  LNEKKTAVAL-SGGLDSVVLLHLLVRAGKKGGFIPEAVHIHHG-----LSPRADDWADFC 81

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                     L    +        I  ++  K  A   +           R+     F  
Sbjct: 82  QNYCDMLGVRLETVKVCVEKNGLGIEAAARQKRYAAFAEKGFDVLALAHHRDDQIETFML 141

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            +A   G+  +                                    +  PL+   + + 
Sbjct: 142 AVARGGGLRALAAMPAVRPLGENGI----------------------IWRPLLPFSRQDI 179

Query: 181 WKLAQDIGGQDLVNLILEES 200
           W  AQ  G  ++ +    ++
Sbjct: 180 WDYAQKHGLPNIEDESNTDT 199


>gi|50285935|ref|XP_445396.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524700|emb|CAG58302.1| unnamed protein product [Candida glabrata]
          Length = 420

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 7/91 (7%)

Query: 5  IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
          + K    + L +SGG D+S  L+W L++   V     D GQ    E +      K +   
Sbjct: 1  MSKGK--VCLAYSGGLDTSIILAWLLEQGYEVVAFMADVGQ----EEDFEAARAKALKIG 54

Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNV 94
            K   S   +  +   I   +  +++ ++V
Sbjct: 55 ATKVVISDVREQFVKDIIFPAVQVNAVYEDV 85


>gi|327273596|ref|XP_003221566.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1-like
           [Anolis carolinensis]
          Length = 417

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 28/113 (24%), Gaps = 9/113 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--------QRNKVELECRLCV 56
           +  A   +   SGG DS+        R   V  +                  + +    V
Sbjct: 1   MLGARRVVCALSGGVDSAVAAVLLRRRGYDVTGVFMKNWDIADEKGVCSADKDCDDAYRV 60

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
            + +     +    + E      + L +      T N  +        N F  
Sbjct: 61  CEILNIPFHQVS-YVKEYWNDVFSYLLNEYELGRTPNPDIICNKYIKFNYFFH 112


>gi|312886176|ref|ZP_07745792.1| Argininosuccinate synthase [Mucilaginibacter paludis DSM 18603]
 gi|311301331|gb|EFQ78384.1| Argininosuccinate synthase [Mucilaginibacter paludis DSM 18603]
          Length = 395

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 59/183 (32%), Gaps = 20/183 (10%)

Query: 7   KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L +SGG D S  C+    D    V ++  + G  ++ EL+       ++     
Sbjct: 1   MKKKVVLAYSGGLDTSFCCIYLTRDLDMEVHSVIVNTGGFSEEELQAVEKRAYEMG---- 56

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                +   H++   I  +  ++ +   V   +  NN     V    +      A  A  
Sbjct: 57  -----VTSHHVVDETI--NFYNTCIRYLVYGNVLKNNTYPLSVSAERVSQATAIANYAKE 109

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +    +      +  +G    R D I        L  E  +      + L + E  K  +
Sbjct: 110 INAEYV---AHGSTGAGNDQVRFDMI-----FNILVPEVQILTPIRDLKLSREEEIKYLK 161

Query: 186 DIG 188
           + G
Sbjct: 162 EHG 164


>gi|307128600|ref|YP_003880630.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Sulcia muelleri CARI]
 gi|306483062|gb|ADM89932.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Sulcia muelleri CARI]
          Length = 387

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 44/183 (24%), Gaps = 7/183 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS        +   V  +   Y   N         +   +V    K  
Sbjct: 2   KRVIVGMSGGVDSSVAALLLKKKGYDVIGIYLKYYNINNKCPWREDSIDAMLVSQSLKIP 61

Query: 69  DSLGED----HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             + +       L +  +        T N  +          F+           AT  Y
Sbjct: 62  FYIIDITKNYKKLIINYIYKEYKKGFTPNPDILCNSKIKFKIFLEKSRFFKSDLIATGHY 121

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                   I      Y        D         NL  +       PL  L K +  ++A
Sbjct: 122 VRKEK---IKKNGKIYYKIISGIDDNKDQSYFLCNLNQDQIQNSIFPLGNLNKKKVREIA 178

Query: 185 QDI 187
              
Sbjct: 179 NKY 181


>gi|269215719|ref|ZP_06159573.1| GMP synthase [Slackia exigua ATCC 700122]
 gi|269131206|gb|EEZ62281.1| GMP synthase [Slackia exigua ATCC 700122]
          Length = 530

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 49/186 (26%), Gaps = 16/186 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS   +        ++  +  ++G   K E E    V           
Sbjct: 221 DRVILALSGGVDSSVVGALLSRAIGKQLTCVFINHGLLRKNEPEEVERV----------- 269

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                E   +    +      +   +  ++ +           +    +         L 
Sbjct: 270 ---FTEQFDVDFVHVHAEERYAELLDGVVEPEQKRRIIGTQFWKEFFTVAQKTGGVKYL- 325

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
               +        +     +  TI++    I      H  +  PL    K E   L   +
Sbjct: 326 AQGTIYPDIIESGARKTGGKASTIKSHHNLIPFPEGVHFDLIEPLDHFFKDEIRALGTAL 385

Query: 188 GGQDLV 193
           G  D +
Sbjct: 386 GLPDRI 391


>gi|58266460|ref|XP_570386.1| argininosuccinate synthase [Cryptococcus neoformans var.
          neoformans JEC21]
 gi|57226619|gb|AAW43079.1| argininosuccinate synthase, putative [Cryptococcus neoformans
          var. neoformans JEC21]
          Length = 429

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 31/89 (34%), Gaps = 1/89 (1%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLC-VRKK 59
          M    +K    +L +SGG D+S  L W +++   V     D GQ    E           
Sbjct: 1  MVATGEKKGKVILAYSGGLDTSCILLWLIEQGYEVVAYMADVGQEEDFEAARAKAMQCGA 60

Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHS 88
          +   +   K    E+ I P      I  +
Sbjct: 61 VGFHLADLKREFVEELIYPAVQCNAIYEN 89


>gi|56475956|ref|YP_157545.1| tRNA-specific 2-thiouridylase MnmA [Aromatoleum aromaticum EbN1]
 gi|81598997|sp|Q5P7R7|MNMA_AZOSE RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|56311999|emb|CAI06644.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase protein
           [Aromatoleum aromaticum EbN1]
          Length = 374

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 53/198 (26%), Gaps = 15/198 (7%)

Query: 1   MNDIIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           M+          ++  SGG DSS        +   V  L     + +  +  C     + 
Sbjct: 1   MSSNTDPNGMKVVVGMSGGVDSSVTALLLKQQGFDVTGLFMKNWEDDDDDEYCSTR--QD 58

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +V++         +  ++            +  +   + +    PN  V   + I     
Sbjct: 59  LVDVASVCDVIGIDLEVVN---FSAEYKDRVFADFLREYEAGRTPNPDVLCNSEIKFRCF 115

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTI---------RAIETAINLGMESHVTVHT 170
              A  LG   I  G          D R +                   L          
Sbjct: 116 LDHAMALGADRIATGHYAQVREWANDGRSEYQLLKAEDGTKDQSYFLYRLNQAQLAKTLF 175

Query: 171 PLMWLKKYETWKLAQDIG 188
           PL  L K +  ++A + G
Sbjct: 176 PLGALYKRDVRRIAAEAG 193


>gi|21312518|ref|NP_082339.1| mitochondrial tRNA-specific 2-thiouridylase 1 [Mus musculus]
 gi|14195274|sp|Q9DAT5|MTU1_MOUSE RecName: Full=Mitochondrial tRNA-specific 2-thiouridylase 1
 gi|12838169|dbj|BAB24110.1| unnamed protein product [Mus musculus]
 gi|26335739|dbj|BAC31570.1| unnamed protein product [Mus musculus]
 gi|26336146|dbj|BAC31758.1| unnamed protein product [Mus musculus]
 gi|33867793|gb|AAQ55218.1| 5'methylaminomethyl-2-thiouridylate-methyltransferase [Mus
           musculus]
 gi|38512243|gb|AAH61026.1| TRNA 5-methylaminomethyl-2-thiouridylate methyltransferase [Mus
           musculus]
 gi|148672470|gb|EDL04417.1| tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase [Mus
           musculus]
          Length = 417

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/113 (11%), Positives = 28/113 (24%), Gaps = 9/113 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--------QRNKVELECRLCV 56
           +      +   SGG DS+        R  +V  +                  + E    V
Sbjct: 1   MSALRHVVCALSGGVDSAVAALLLRRRGYQVTGVFMKNWDSLDEQGVCAADKDCEDAYKV 60

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
            + +     +    + E      +   +      T N  +    +   + F  
Sbjct: 61  CQILDIPFHQVS-YVKEYWNDVFSDFLNEYEKGRTPNPDINCNKHIKFSCFYH 112


>gi|134111374|ref|XP_775603.1| hypothetical protein CNBD5570 [Cryptococcus neoformans var.
          neoformans B-3501A]
 gi|50258265|gb|EAL20956.1| hypothetical protein CNBD5570 [Cryptococcus neoformans var.
          neoformans B-3501A]
          Length = 429

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 31/89 (34%), Gaps = 1/89 (1%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLC-VRKK 59
          M    +K    +L +SGG D+S  L W +++   V     D GQ    E           
Sbjct: 1  MVATGEKKGKVILAYSGGLDTSCILLWLIEQGYEVVAYMADVGQEEDFEAARAKAMQCGA 60

Query: 60 IVELMPKWKDSLGEDHILPLAILGDISHS 88
          +   +   K    E+ I P      I  +
Sbjct: 61 VGFHLADLKREFVEELIYPAVQCNAIYEN 89


>gi|114762215|ref|ZP_01441683.1| argininosuccinate synthase [Pelagibaca bermudensis HTCC2601]
 gi|114545239|gb|EAU48242.1| argininosuccinate synthase [Roseovarius sp. HTCC2601]
          Length = 406

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 6/87 (6%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIV-- 61
          +      +L +SGG D+S  L W   +    V T + D GQ  ++E        + +   
Sbjct: 1  MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEP--ARKKAEMLGVS 58

Query: 62 -ELMPKWKDSLGEDHILPLAILGDISH 87
             +   ++    D + P+     +  
Sbjct: 59 EVYIEDLREEFVRDFVFPMFRANALYE 85


>gi|328875337|gb|EGG23702.1| GMP synthetase [Dictyostelium fasciculatum]
          Length = 692

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 54/186 (29%), Gaps = 2/186 (1%)

Query: 10  SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        +RV  L  D G     E +        +   +   
Sbjct: 252 KVLVLVSGGVDSTVCAALLTKAIGAERVVALHIDNGFMRHHESKNVETALGVLGLHLIVV 311

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             S    +              +T +   K +        V    +  L       +   
Sbjct: 312 DASQAFFNGTTTIAGKVTDKLCITVHPEEKRKIIGDTFMRVAEDEVRKLGLDPNHVFLAQ 371

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            T     +  +  +             +T +   + +   V  PL  L K E  +L + +
Sbjct: 372 GTLRPDLIESSSKTVSGVADVIKTHHNDTELVRLLRATGRVVEPLRDLHKDEVRELGKSL 431

Query: 188 GGQDLV 193
           G  + +
Sbjct: 432 GLSESL 437


>gi|196034345|ref|ZP_03101754.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus W]
 gi|195992887|gb|EDX56846.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus W]
          Length = 372

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 52/193 (26%), Gaps = 11/193 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN +  +    ++  SGG DSS       ++   V  +             C     +  
Sbjct: 2   MNKLPHET-RVVIGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            +      + +    PN  V     I      
Sbjct: 59  NDVIEVCNQIGIPYYAVN---FEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAFL 115

Query: 121 TLAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWL 175
             A  LG   +  G           Y   R       +T     L  E       PL  L
Sbjct: 116 EHAIALGADYVATGHYARVAYMDGEYKMLRGVDDNKDQTYFLNQLSQEQLSKTMFPLGEL 175

Query: 176 KKYETWKLAQDIG 188
           KK +  ++A+  G
Sbjct: 176 KKPQIREMAKKAG 188


>gi|290969182|ref|ZP_06560707.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Megasphaera genomosp. type_1 str. 28L]
 gi|290780688|gb|EFD93291.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Megasphaera genomosp. type_1 str. 28L]
          Length = 362

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 46/192 (23%), Gaps = 14/192 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK----VELECRLCVRKKIVE 62
                 +  SGG DSS        R   V  ++    +        E     C    + +
Sbjct: 1   MKQCVAVAMSGGVDSSVTAGLLQRRGLDVIGITLRLWEAPPTCEVTENIHACCSLSAVED 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                       + L      D+    +        +D   PN  +     I        
Sbjct: 61  AKAVADVLGIPHYTLD---FRDVFSQDVITYFIQAYKDGKTPNPCIACNKWIKFGLLWQR 117

Query: 123 AYRLGITNIVIGVCETDYSGYPDC-------RHDTIRAIETAINLGMESHVTVHTPLMWL 175
           A + G   +  G                                L  +    +  P+  L
Sbjct: 118 AQQFGADFLATGHYARIVYDARRKVYSLLRGADRRKDQSYVLYQLQQDLLPHILFPMAEL 177

Query: 176 KKYETWKLAQDI 187
            K ET +LA++ 
Sbjct: 178 TKTETRRLAKEW 189


>gi|209966151|ref|YP_002299066.1| argininosuccinate synthase [Rhodospirillum centenum SW]
 gi|226697528|sp|B6IVD0|ASSY_RHOCS RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|209959617|gb|ACJ00254.1| argininosuccinate synthase [Rhodospirillum centenum SW]
          Length = 406

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 49/179 (27%), Gaps = 9/179 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +       +L +SGG D+S  L W  + +   V T + D GQ  ++E        + +  
Sbjct: 1   MTSGVKKVVLAYSGGLDTSVILKWLQETYRCEVVTFTADLGQGEELEP--ARAKAQMLGI 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                   + +     +         + T      +   ++    +  R I         
Sbjct: 59  RPENI--FIDDLREEFVRDFVFPMFRANTLYEGTYLLGTSIARPLISKRQIEIANLVGAD 116

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV----TVHTPLMWLKK 177
           A   G T         +   Y       + A      L   + +      H   +   K
Sbjct: 117 AVAHGATGKGNDQVRFELGYYALKPDVRVIAPWREWQLNSRTALLDFAEKHQIPIAKDK 175


>gi|134093604|ref|YP_001098679.1| tRNA-specific 2-thiouridylase MnmA [Herminiimonas arsenicoxydans]
 gi|205816908|sp|A4G213|MNMA_HERAR RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|133737507|emb|CAL60550.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Herminiimonas arsenicoxydans]
          Length = 372

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 32/131 (24%), Gaps = 5/131 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS       ++   V  L     + +     C     +  ++     
Sbjct: 3   KKRVVIGMSGGVDSSVSAWLLKEQGYEVIGLFMKNWEDDDDSEYCSTR--QDWIDAASVA 60

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                +   +            +      + +    PN  V     I        A  LG
Sbjct: 61  DVVGVD---IEAVNFAAEYKDRVFAEFLREYEAGRTPNPDVLCNAEIKFKAFLDHAMLLG 117

Query: 128 ITNIVIGVCET 138
              I  G    
Sbjct: 118 ADMIATGHYAR 128


>gi|254570633|ref|XP_002492426.1| Arginosuccinate synthetase [Pichia pastoris GS115]
 gi|46981799|gb|AAT07966.1| arginino succinate synthase [Pichia pastoris]
 gi|238032224|emb|CAY70217.1| Arginosuccinate synthetase [Pichia pastoris GS115]
 gi|328353559|emb|CCA39957.1| argininosuccinate synthase [Pichia pastoris CBS 7435]
          Length = 415

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 45/171 (26%), Gaps = 17/171 (9%)

Query: 5   IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + K    + L +SGG D+S  L+W L++   V     + GQ  + + E       KI   
Sbjct: 1   MSKGK--VCLAYSGGLDTSIILAWLLEQGYEVVAFLANIGQ--EEDFEAAREKALKIGA- 55

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                        +   +  +     L   V +     N+          +       +A
Sbjct: 56  ----------TKFIVSDVRKEFVEEVLFPAVQVNAIYENVYLLGTSLARPVIAKAQIEVA 105

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
            + G   +  G C    +                + +              
Sbjct: 106 EQEGCFAVAHG-CTGKGNDQVRFELSFYALKPDVVCIAPWRDPEFFERFAG 155


>gi|309790493|ref|ZP_07685053.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Oscillochloris trichoides DG6]
 gi|308227480|gb|EFO81148.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Oscillochloris trichoides DG6]
          Length = 513

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 52/192 (27%), Gaps = 19/192 (9%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
            + + +    +   SGG DS+           +R+  +  D G               ++
Sbjct: 209 REKVGEEGRVICALSGGVDSAVAALIIHRAIGERLTCVFVDNG-------------LLRL 255

Query: 61  VELMPKWKDSLGEDHI-LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
            E            HI L      D   S+L      + +   +   F+           
Sbjct: 256 GEAEQVIATFREHFHIPLIAVDARDEFLSALENVADPEQKRKIIGEKFIRIFEREARALN 315

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
                  G           + S     +  TI+       L  +  + +  PL ++ K E
Sbjct: 316 GAQFLAQGTLY----PDVIESSAPDRKKGVTIKTHHNVGGLPADMQMQLVEPLRYMFKDE 371

Query: 180 TWKLAQDIGGQD 191
                 ++G  +
Sbjct: 372 VRAAGLELGLPE 383


>gi|306826063|ref|ZP_07459399.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus sp. oral taxon 071 str. 73H25AP]
 gi|304431779|gb|EFM34759.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus sp. oral taxon 071 str. 73H25AP]
          Length = 415

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 51/194 (26%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 43  MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 98

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 99  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 155

Query: 121 TLAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 156 DYAMTLGADYVATGHYARVARDEDGIVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 215

Query: 175 LKKYETWKLAQDIG 188
           L+K E  KLA++ G
Sbjct: 216 LEKPEVRKLAEEAG 229


>gi|289207540|ref|YP_003459606.1| argininosuccinate synthase [Thioalkalivibrio sp. K90mix]
 gi|288943171|gb|ADC70870.1| argininosuccinate synthase [Thioalkalivibrio sp. K90mix]
          Length = 407

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 55/175 (31%), Gaps = 9/175 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +  K    +L +SGG D+S  L W  D+    V T + D GQ  +VE          + +
Sbjct: 1   MSSKISRVVLAYSGGLDTSVILKWLEDQYGCEVITFTADLGQGEEVEPARAKAEALGVKQ 60

Query: 63  LM-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +     +++   D++ P+         + T      +   ++    +  R +        
Sbjct: 61  IYIEDLRETFVRDYVFPM-------FRANTIYEGEYLLGTSIARPLIARRMVEIAEETGA 113

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
            A   G T         +   Y       + A     +L     +  +     + 
Sbjct: 114 DAIAHGATGKGNDQVRFELGAYALKPGIRVIAPWREWDLNSRERLMAYAEQHNIP 168


>gi|148555877|ref|YP_001263459.1| argininosuccinate synthase [Sphingomonas wittichii RW1]
 gi|172048260|sp|A5VAK5|ASSY_SPHWW RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|148501067|gb|ABQ69321.1| argininosuccinate synthase [Sphingomonas wittichii RW1]
          Length = 405

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 54/178 (30%), Gaps = 7/178 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L FSGG D+S  L W    +   V T + D GQ  ++E        K +   
Sbjct: 1   MSDVKRVVLAFSGGLDTSVILKWLQQTYQCEVVTFTADLGQGEELEP--ARAKAKLMGVP 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                     +  +   +   +  ++L +   + +   ++    +  R I         A
Sbjct: 59  DEHIFIDDLREEFVKDYVFPMMRGNALYEG--LYLLGTSIARPLIAKRQIEIARAVGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH--TPLMWLKKYE 179
              G T         +   Y       + A     +L   + +        + + K +
Sbjct: 117 VSHGATGKGNDQVRFELGYYGLAPDIRVIAPWREWDLTSRTALIDFAEKHQIPVPKDK 174


>gi|255620457|ref|XP_002540114.1| argininosuccinate synthase, putative [Ricinus communis]
 gi|223499083|gb|EEF22268.1| argininosuccinate synthase, putative [Ricinus communis]
          Length = 105

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + KK    +L +SGG D+S  L W        V T + + GQ  ++E        +++  
Sbjct: 32 MSKKLKKVVLAYSGGLDTSIILKWLQQTYGCEVVTFTANLGQGEELEP--ARRKAEQLGA 89

Query: 63 LMPKWKD 69
             + +D
Sbjct: 90 TDIRIED 96


>gi|182419326|ref|ZP_02950578.1| GMP synthase [Clostridium butyricum 5521]
 gi|237666785|ref|ZP_04526770.1| GMP synthase (glutamine-hydrolyzing) [Clostridium butyricum E4 str.
           BoNT E BL5262]
 gi|182376657|gb|EDT74229.1| GMP synthase [Clostridium butyricum 5521]
 gi|237657984|gb|EEP55539.1| GMP synthase (glutamine-hydrolyzing) [Clostridium butyricum E4 str.
           BoNT E BL5262]
          Length = 513

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 53/189 (28%), Gaps = 21/189 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              AL   SGG DSS            ++  +  D+G   K E +    +          
Sbjct: 215 NGKALCALSGGVDSSVAAVLLSKAIGKQLTCVFVDHGLLRKNEGDEVEAI---------- 264

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G +    L  +   +     + +A                   F+      A ++
Sbjct: 265 ----FGPNGNYDLNFIRVNAQERFYEKLAGVEDPETKRKII----GEEFIRVFEEEAKKI 316

Query: 127 GI-TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLA 184
           G    +V G    D       +   I++      L        +  PL  L K E  K  
Sbjct: 317 GAVDFLVQGTIYPDVIESGLGKSAVIKSHHNVGGLPDYVDFKEIIEPLRLLFKDEVRKAG 376

Query: 185 QDIGGQDLV 193
            ++G  + +
Sbjct: 377 LELGIPEKL 385


>gi|109094553|ref|XP_001111019.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1-like
           isoform 2 [Macaca mulatta]
          Length = 422

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/113 (11%), Positives = 29/113 (25%), Gaps = 9/113 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--------QRNKVELECRLCV 56
           ++     +   SGG DS+        R  +V  +                  + E    V
Sbjct: 1   MQAVRHVVCALSGGVDSAVAALLLRRRGYQVTGVFMKNWDSLDEHGVCTADKDCEDAYRV 60

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
            + +     +    + E      +   +      T N  +    +   + F  
Sbjct: 61  CQILDIPFHQVS-YIKEYWNDVFSDFLNEYEKGRTPNPDIVCNKHIKFSCFFH 112


>gi|75055053|sp|Q5RB73|MTU1_PONAB RecName: Full=Mitochondrial tRNA-specific 2-thiouridylase 1
 gi|55728489|emb|CAH90987.1| hypothetical protein [Pongo abelii]
          Length = 422

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/113 (11%), Positives = 29/113 (25%), Gaps = 9/113 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--------QRNKVELECRLCV 56
           ++     +   SGG DS+        R  +V  +                  + E    V
Sbjct: 1   MQAVRHVVCALSGGVDSAVAALLLRRRGYQVTGVFMKNWDSLDEHGVCTADKDCEDAYRV 60

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
            + +     +    + E      +   +      T N  +    +   + F  
Sbjct: 61  CQILDIPFHQVS-YVKEYWNDVFSDFLNEYEKGRTPNPDIVCNKHIKFSCFFH 112


>gi|240169595|ref|ZP_04748254.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycobacterium kansasii ATCC 12478]
          Length = 363

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 40/181 (22%), Gaps = 4/181 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL-MPKWK 68
             L   SGG DSS   +  +D    V  +                    K       +  
Sbjct: 2   KVLAAMSGGVDSSVAAARMVDAGHEVVGVHLALSTAPSTLRTGSRGCCSKEDASDARRVA 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D LG    +      +  +  +  +          PN  V     I     +  A  LG 
Sbjct: 62  DVLGIPFYVW--DFAEKFNEDVIDDFVSSYARGETPNPCVRCNQRIKFSALSARALALGF 119

Query: 129 TNIVIGVCETDYSGY-PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +  G       G                  L          P+    K +    A   
Sbjct: 120 DAVATGHYARLSDGRLRRAVDRDKDQSYVLAVLTARQLRHALFPIGDTPKPQIRAEAARR 179

Query: 188 G 188
           G
Sbjct: 180 G 180


>gi|182412017|ref|YP_001817083.1| GMP synthase, large subunit [Opitutus terrae PB90-1]
 gi|254800108|sp|B1ZNB4|GUAA_OPITP RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|177839231|gb|ACB73483.1| GMP synthase, large subunit [Opitutus terrae PB90-1]
          Length = 512

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 53/190 (27%), Gaps = 18/190 (9%)

Query: 6   KKAPSALLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           K   S ++L  SGG DSS   +        ++  +  D G   K E +    + KK    
Sbjct: 211 KAGKSRVILGLSGGVDSSVAAALLHKAIGRQLTCVFVDNGLLRKGERDYVEALYKK---- 266

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                        + L I+              + +                 +     A
Sbjct: 267 ----------HFHIDLRIVDASKLFLKRLKGVTEPEQKRKIIGRTFVEVFEKALKTVGHA 316

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             LG   +   V E+   G        I+       L     + +  PL  L K E  K+
Sbjct: 317 DFLGQGTLYPDVIESVSIGNNPASV--IKTHHNVGGLPERMKLKLIEPLRELFKDEVRKV 374

Query: 184 AQDIGGQDLV 193
              +G    V
Sbjct: 375 GAALGLPKEV 384


>gi|323141405|ref|ZP_08076296.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain
           [Phascolarctobacterium sp. YIT 12067]
 gi|322414154|gb|EFY04982.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain
           [Phascolarctobacterium sp. YIT 12067]
          Length = 517

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 52/188 (27%), Gaps = 22/188 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS C +        ++  +  D+G   K E       R+++  +  +  
Sbjct: 220 KVLCALSGGVDSSVCAAMLAKAIGKQLTCVFVDHGLLRKNE-------REEVCAVFGEGG 272

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   +              +    K+     P          F+      A ++G 
Sbjct: 273 QFDINFICVD-----------ARERFYSKLAGVTAPEGKRKIIGEEFIRVFEEEAKKIGA 321

Query: 129 TNIV---IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            + +       +   SG                         +  PL  L K E  +  +
Sbjct: 322 VDYLAQGTIYPDVVESGLGGESATIKSHHNVGGLPDFVDFKEIVEPLRDLFKDEVRQSGR 381

Query: 186 DIGGQDLV 193
           ++G  + +
Sbjct: 382 ELGLPENL 389


>gi|227431943|ref|ZP_03913963.1| argininosuccinate synthase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227352228|gb|EEJ42434.1| argininosuccinate synthase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 408

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 58/194 (29%), Gaps = 20/194 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              + +L +SGG D+S  + W  D+   V  +  D GQ  K   E +    K        
Sbjct: 1   MTDTLVLAYSGGLDTSVAIPWLKDKGYDVIAVVLDVGQHGKNLNEIQEKALK-------- 52

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +G    + + + G+ +   +   +   +               + +     +A+  
Sbjct: 53  ----VGAKQSIVIDVKGEFADKYVAPVIKANMMYEGEYPMVSALSRPLIIKKLVDIAHEN 108

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I         S           A   A++  M+    +        + E  + AQ+
Sbjct: 109 DAVAI------AHGSTGHGNDQVRFEAAIHALDPDMKIEAPIRDFQ--WSREEEIQYAQE 160

Query: 187 IGGQDLVNLILEES 200
                 ++L    S
Sbjct: 161 HDVPVPIDLDSPYS 174


>gi|94495596|ref|ZP_01302176.1| argininosuccinate synthase [Sphingomonas sp. SKA58]
 gi|94424984|gb|EAT10005.1| argininosuccinate synthase [Sphingomonas sp. SKA58]
          Length = 405

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 59/208 (28%), Gaps = 15/208 (7%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +K    +L FSGG D+S  L W        V T + D GQ  ++E          + +
Sbjct: 1   MTEKINRIVLAFSGGLDTSVILKWLQQTYGCEVVTFTADLGQGEELEPARAKAQLMGVKQ 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
               + D L E+ +            S      + +   ++    +  R I         
Sbjct: 61  -EHIFIDDLREEFVKDYVF---PMMRSNALYEGLYLLGTSIARPLIAKRQIEIAKQVGAD 116

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV----TVHTPLMWLKK- 177
           A   G T         +   Y       + A     +L   + +      H   +   K 
Sbjct: 117 AVSHGATGKGNDQVRFELGYYALSPDIKVIAPWREWDLTSRTKLIEFAEKHQIPIPRDKR 176

Query: 178 -----YETWKLAQDIGGQDLVNLILEES 200
                     +        ++    EE+
Sbjct: 177 GESPFSTDANMLHTSSEGKVLEDPWEET 204


>gi|20904364|gb|AAM29733.1| Argininosuccinate synthase [Methanosarcina mazei Go1]
          Length = 414

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 56/206 (27%), Gaps = 10/206 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKI--V 61
                  L +SGG D+S C+    ++  +D V T+S D GQ  + E+       +KI   
Sbjct: 20  SMVKKVALAYSGGLDTSVCIPILKEKYGYDEVITISVDVGQ-PEEEIRKADAKAQKISNK 78

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                 K+    D+I PL          +      +                I L    T
Sbjct: 79  HYTIDAKEEFVRDYIFPLIKANGNYEGYVMGTSVARPLIAKKVVEAAKKEGAIALAHGCT 138

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
                 +    +          P    +  R  E          V       W      W
Sbjct: 139 GKGNDQLRFEAVFRQTDMDVIAPMREMNLTREWEINYAKEHGIPVEATKSKPWSVDENIW 198

Query: 182 KLAQDIGGQD-----LVNLILEESHT 202
             + + G  +         I E + +
Sbjct: 199 SRSIEGGRLEDPSFVPPEEIFEWTKS 224


>gi|323705926|ref|ZP_08117497.1| NAD+ synthetase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323534724|gb|EGB24504.1| NAD+ synthetase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 545

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/193 (8%), Positives = 47/193 (24%), Gaps = 2/193 (1%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDR-VETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             A++  SGG DS+   + A+       V  +S      ++   +    + + +      
Sbjct: 290 KKAVVGLSGGIDSAVTCALAVKALGRENVLGVSMPSRYSSEGSKDDARDLAQNLNIEYRV 349

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     + +          L +         N           + L         +
Sbjct: 350 IPIEDVFKSYISIFNKDGNIVGDLAEENLQARIRGNYLMFISNREGHMVLTTGNKSEIAV 409

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   +   +           +       +      +   ++        +     K    
Sbjct: 410 GYCTLYGDMSGGLAVISDVPKTMVYELAKYINRENIIIPISTIEKAPSAELRPNQKDTDS 469

Query: 187 IGGQDLVNLILEE 199
           +   ++++ IL+ 
Sbjct: 470 LPPYEILDDILKL 482


>gi|303236987|ref|ZP_07323562.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella disiens FB035-09AN]
 gi|302482852|gb|EFL45872.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella disiens FB035-09AN]
          Length = 376

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 44/189 (23%), Gaps = 7/189 (3%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN    K     +L SGG DSS  +          +      G   K E +C     + +
Sbjct: 1   MNYDEIKDKRIAVLLSGGVDSSVVVYEFARLGLTPDCFYIRIGPEEKEEWDCNSE--EDV 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                  +       ++      +         +             +  R I F  F  
Sbjct: 59  EMATAVARRFGCTLKVID--CHKEYWSQVTKYTMDKVRAGFTPNPDVMCNRMIKFGAFHE 116

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKK 177
                  +             G            +    L       +     P+   +K
Sbjct: 117 KCGKDYDLIATGHYAQTKWIEGKKWLCTSPDPVKDQTDFLAQIYDWQLKKAIFPIGHYEK 176

Query: 178 YETWKLAQD 186
            E  ++A+ 
Sbjct: 177 NEVREIAER 185


>gi|242373921|ref|ZP_04819495.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus epidermidis M23864:W1]
 gi|242348475|gb|EES40077.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus epidermidis M23864:W1]
          Length = 372

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/189 (12%), Positives = 48/189 (25%), Gaps = 12/189 (6%)

Query: 5   IKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +       ++  SGG DSS       ++   V  +             C     +   ++
Sbjct: 1   MSNEDIRVVVGMSGGVDSSVTAYLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDYNDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +          + +      +     +      + +    PN  V     I        A
Sbjct: 59  IAVCNQIGIPYYAVN---FEEEYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLEHA 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLKK 177
            +LG   +  G                               L  E    V  P+  ++K
Sbjct: 116 LKLGADYVATGHYARIRRHEDGHVEMLRGVDNNKDQTYFLNQLSQEQLSKVMFPIGDIEK 175

Query: 178 YETWKLAQD 186
            E  ++A++
Sbjct: 176 SEVRRIAEE 184


>gi|210630569|ref|ZP_03296519.1| hypothetical protein COLSTE_00404 [Collinsella stercoris DSM 13279]
 gi|210160427|gb|EEA91398.1| hypothetical protein COLSTE_00404 [Collinsella stercoris DSM 13279]
          Length = 563

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 49/185 (26%), Gaps = 12/185 (6%)

Query: 8   APSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +  A     ++  +  ++G   K E E    V  K       
Sbjct: 249 EDRVILALSGGVDSSVVAALGARAVGRQMTCVFINHGLLRKSEPEQVEEVFTK------- 301

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                  D +   A     +      +   K +                L         L
Sbjct: 302 ---QFDVDFVHVHAEERYAALLDGVTDPEEKRRIIGTQFWNEFFAVAKDLETDGRPVKYL 358

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                +        +     +  TI++    I      H  +  PL    K E  +L   
Sbjct: 359 -AQGTIYPDIIESGARKTGGKTATIKSHHNLIPFPEGVHFDLIEPLDHFFKDEVRELGLA 417

Query: 187 IGGQD 191
           +G  +
Sbjct: 418 LGLPE 422


>gi|209364581|ref|NP_001125570.1| mitochondrial tRNA-specific 2-thiouridylase 1 [Pongo abelii]
          Length = 421

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/113 (11%), Positives = 29/113 (25%), Gaps = 9/113 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--------QRNKVELECRLCV 56
           ++     +   SGG DS+        R  +V  +                  + E    V
Sbjct: 1   MQAVRHVVCALSGGVDSAVAALLLRRRGYQVTGVFMKNWDSLDEHGVCTADKDCEDAYRV 60

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
            + +     +    + E      +   +      T N  +    +   + F  
Sbjct: 61  CQILDIPFHQVS-YVKEYWNDVFSDFLNEYEKGRTPNPDIVCNKHIKFSCFFH 112


>gi|113869080|ref|YP_727569.1| tRNA-specific 2-thiouridylase MnmA [Ralstonia eutropha H16]
 gi|123133633|sp|Q0K720|MNMA_RALEH RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|113527856|emb|CAJ94201.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ralstonia eutropha H16]
          Length = 361

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 43/189 (22%), Gaps = 11/189 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS        +   V  L     + +     C         + +    
Sbjct: 6   KRVVVGMSGGVDSSVTAWLLKQQGYEVIGLFMKNWEDDDDSEYCSTRQ-----DWLDVVS 60

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +      +            +  +   +      PN  V     I        A  LG 
Sbjct: 61  VADLIGVDVEAVNFAAEYKDRVFADFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLGA 120

Query: 129 TNIVIGVCETDYSGYPDCR------HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
             I  G                     T         L          PL  + K    +
Sbjct: 121 ETIATGHYARVRQNAAGRFELLKALDHTKDQSYFLHRLNQAQLSRTLFPLGEIPKTRVRE 180

Query: 183 LAQDIGGQD 191
           +A +IG  +
Sbjct: 181 IAAEIGLPN 189


>gi|73542506|ref|YP_297026.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ralstonia eutropha JMP134]
 gi|123624143|sp|Q46XF1|MNMA_RALEJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|72119919|gb|AAZ62182.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ralstonia eutropha JMP134]
          Length = 362

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 43/189 (22%), Gaps = 11/189 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS        +   V  L     + +     C         + +    
Sbjct: 4   KRVVVGMSGGVDSSVTAWLLKQQGYEVIGLFMKNWEDDDDSEYCSTRQ-----DWLDVVS 58

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +      +            +  +   +      PN  V     I        A  LG 
Sbjct: 59  VADLIGVDVEAVNFAAEYKDRVFADFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLGA 118

Query: 129 TNIVIGVCETDYSGYPDCR------HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
             I  G                     T         L          PL  + K    +
Sbjct: 119 ETIATGHYARVRQNAAGRFELLKALDHTKDQSYFLHRLNQAQLSRTLFPLGEIPKTRVRE 178

Query: 183 LAQDIGGQD 191
           +A +IG  +
Sbjct: 179 IAAEIGLPN 187


>gi|313618826|gb|EFR90711.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria innocua FSL S4-378]
          Length = 371

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/185 (11%), Positives = 47/185 (25%), Gaps = 12/185 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS       ++   V  +   ++   ++  +         ++ +  +  
Sbjct: 9   RVVVGMSGGVDSSVTAHILKEQGYDVIGIFMKNWDDTDEFGVCTATEDYDDVIRVANQIG 68

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                     +    +      T  +             +     I        A  LG 
Sbjct: 69  IPYYA-----VNFEKEYWDKVFTYFLDEYKLGRTPNPDVMC-NKEIKFKAFLEHAESLGA 122

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +  G          +        +          L  +    V  PL  ++K E  ++
Sbjct: 123 DYVATGHYAQVKKVGDEIELLRGVDNNKDQTYFLNQLSQDQLKKVMFPLGGMEKTEVREI 182

Query: 184 AQDIG 188
           A   G
Sbjct: 183 ATKAG 187


>gi|119478303|ref|ZP_01618334.1| argininosuccinate synthase [marine gamma proteobacterium HTCC2143]
 gi|119448643|gb|EAW29888.1| argininosuccinate synthase [marine gamma proteobacterium HTCC2143]
          Length = 406

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 52/173 (30%), Gaps = 7/173 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  + W  D +   V T + D GQ  +VE        + +  +
Sbjct: 1   MSDIKKVVLAYSGGLDTSVIVRWLQDTYQCEVVTFTADIGQGEEVEP--ARKKAEALG-V 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + D L E+ +            + T      +   ++    +  R I         A
Sbjct: 58  KEIYIDDLKEEFVRDFVF---PMFRANTIYEGEYLLGTSIARPLIAKRLIEITNETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
              G T         +   Y       + A     +L     +  +     + 
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGIQVIAPWREWDLTSRETLMAYCETHNIP 167


>gi|32266720|ref|NP_860752.1| argininosuccinate synthase [Helicobacter hepaticus ATCC 51449]
 gi|44887709|sp|Q7VGU9|ASSY_HELHP RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|32262771|gb|AAP77818.1| argininosuccinate synthase [Helicobacter hepaticus ATCC 51449]
          Length = 404

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 44/158 (27%), Gaps = 5/158 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  +VE         K+   
Sbjct: 1   MAAIKKVVLAYSGGLDTSVILKWLGDNYHCEVVTFTADIGQGEEVEP--AREKALKLGIK 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                     +  +           + T      +   ++    +  R +         A
Sbjct: 59  SENIFIEDLREEFIK--DFVFPMFRANTIYEGEYLLGTSIARPLIAKRLVEIAKSVGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
              G T         +   Y       + A     +L 
Sbjct: 117 IAHGATGKGNDQVRFELGAYALNPDIKVIAPWREWDLN 154


>gi|16800615|ref|NP_470883.1| tRNA-specific 2-thiouridylase MnmA [Listeria innocua Clip11262]
 gi|24638323|sp|Q92BK1|MNMA_LISIN RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|16414020|emb|CAC96778.1| lin1547 [Listeria innocua Clip11262]
          Length = 371

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/185 (11%), Positives = 47/185 (25%), Gaps = 12/185 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS       ++   V  +   ++   ++  +         ++ +  +  
Sbjct: 9   RVVVGMSGGVDSSVTAHILKEQGYDVIGIFMKNWDDTDEFGVCTATEDYDDVIRVANQIG 68

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                     +    +      T  +             +     I        A  LG 
Sbjct: 69  IPYYA-----VNFEKEYWDKVFTYFLDEYKLGRTPNPDVMC-NKEIKFKAFLEHAESLGA 122

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +  G          +        +          L  +    V  PL  ++K E  ++
Sbjct: 123 DYVATGHYAQVKKVGDEIELLRGVDNNKDQTYFLNQLSQDQLKKVMFPLGGMEKTEVREI 182

Query: 184 AQDIG 188
           A   G
Sbjct: 183 ATKAG 187


>gi|86140336|ref|ZP_01058895.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Leeuwenhoekiella blandensis MED217]
 gi|85832278|gb|EAQ50727.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Leeuwenhoekiella blandensis MED217]
          Length = 399

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 49/186 (26%), Gaps = 12/186 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            + ++  SGG DSS       +    V  L       + V +           + M   +
Sbjct: 2   KTVVVGLSGGVDSSVSAYLLKEAGYNVIGLFMKNWHDDSVTISDECPWLDDSNDAMLVAE 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   +    L +     +   +  + +    PN  V     I       +A  LG 
Sbjct: 62  KLGIPFQTVD---LSEQYKERIVDYMFWEYEMGRTPNPDVLCNREIKFDVFMKIALDLGA 118

Query: 129 TNIVIGVCETDYSGYPDCRHDTI---------RAIETAINLGMESHVTVHTPLMWLKKYE 179
             +  G          D +                     L  E       P+  L+K E
Sbjct: 119 DYVATGHYCQRGETEIDGKPVYQLLAGADANKDQSYFLCQLSQEQLAKTLFPIGHLQKSE 178

Query: 180 TWKLAQ 185
             K+A+
Sbjct: 179 VRKIAK 184


>gi|325198322|gb|ADY93778.1| tRNA(Ile)-lysidine synthase [Neisseria meningitidis G2136]
          Length = 426

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/196 (12%), Positives = 45/196 (22%), Gaps = 31/196 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELM 64
               +  SGG DS   L   +    R     E L   +G                     
Sbjct: 12  KKTAVALSGGLDSVVLLHLLVRAGKRAGFVPEALHIHHG-----LSPRADDWADFCQNYC 66

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L    +        I  ++  K  A   +           R+     F   +A 
Sbjct: 67  DMLGVGLETVKVCVEKNGLGIEAAARQKRYAAFAEKGFDILALAHHRDDQIETFMLAVAR 126

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G+  +        +                           +  PL+   + + W  A
Sbjct: 127 GGGLRALAAMPAVRPFGEKGI----------------------IWRPLLPFSRQDIWDYA 164

Query: 185 QDIGGQDLVNLILEES 200
           Q  G  ++ +    ++
Sbjct: 165 QKHGLPNIEDESNTDT 180


>gi|325138171|gb|EGC60742.1| tRNA(Ile)-lysidine synthase [Neisseria meningitidis ES14902]
          Length = 426

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/196 (12%), Positives = 45/196 (22%), Gaps = 31/196 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELM 64
               +  SGG DS   L   +    R     E L   +G                     
Sbjct: 12  KKTAVALSGGLDSVVLLHLLVRAGKRAGFVPEALHIHHG-----LSPRADDWADFCQNYC 66

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L    +        I  ++  K  A   +           R+     F   +A 
Sbjct: 67  DMLGVGLETVKVCVEKNGLGIEAAARQKRYAAFAEKGFDILALAHHRDDQIETFMLAVAR 126

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G+  +        +                           +  PL+   + + W  A
Sbjct: 127 GGGLRALAAMPAVRPFGEKGI----------------------IWRPLLPFSRQDIWDYA 164

Query: 185 QDIGGQDLVNLILEES 200
           Q  G  ++ +    ++
Sbjct: 165 QKHGLPNIEDESNTDT 180


>gi|311694977|gb|ADP97850.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [marine bacterium HP15]
          Length = 395

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/137 (15%), Positives = 35/137 (25%), Gaps = 5/137 (3%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS       D+  +VE L       +     C       + +   
Sbjct: 13  NANTRVIVGMSGGVDSSVAAWLLKDQGYQVEGLFMKNWDEDDGTEYC--TAMTDLADAQA 70

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  + H    A         + ++   + Q    PN  +     +        A  
Sbjct: 71  VADAIGIKLHT---ASFAAEYWDRVFEHFLSEYQAGRTPNPDILCNKEVKFRAFLDYAIT 127

Query: 126 LGITNIVIGVCETDYSG 142
           LG   I  G        
Sbjct: 128 LGADYIATGHYARQRPI 144


>gi|218128478|ref|ZP_03457282.1| hypothetical protein BACEGG_00048 [Bacteroides eggerthii DSM
          20697]
 gi|317475697|ref|ZP_07934957.1| tRNA methyl transferase [Bacteroides eggerthii 1_2_48FAA]
 gi|217989369|gb|EEC55682.1| hypothetical protein BACEGG_00048 [Bacteroides eggerthii DSM
          20697]
 gi|316908153|gb|EFV29847.1| tRNA methyl transferase [Bacteroides eggerthii 1_2_48FAA]
          Length = 362

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/92 (10%), Positives = 25/92 (27%), Gaps = 3/92 (3%)

Query: 2  NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           D+ K     L+  SGG DS+       ++   +  L+         E      + + + 
Sbjct: 4  RDMNKAEKRVLVGMSGGIDSTATCLMLREQGYEIVGLTMWVWGD---EPSEARQLAQSMG 60

Query: 62 ELMPKWKDSLGEDHILPLAILGDISHSSLTKN 93
                 +      ++    + +         
Sbjct: 61 IEHYVADERKAFREVIVRNFIDEYRQGRTPNP 92


>gi|159905703|ref|YP_001549365.1| PP-loop domain-containing protein [Methanococcus maripaludis C6]
 gi|159887196|gb|ABX02133.1| PP-loop domain protein [Methanococcus maripaludis C6]
          Length = 324

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 58/213 (27%), Gaps = 23/213 (10%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRLCVR 57
           N+II      L+  SGG+DS   L            ++  ++ D                
Sbjct: 69  NNIIFPKDKILVGLSGGKDSLALLHLLEPYRRKYGVKIYAVTVDLNINGIRPWVQSNKNV 128

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           +KI E             I+     G++   S   +   K  + +   +    R  +   
Sbjct: 129 EKISEHCKNLN---IPHEIIAND--GNVVEMSKILSENTKGIEYSPCFSCSMVRRHVLTN 183

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH------------ 165
           +A           I IG    D S            I+    +   +             
Sbjct: 184 YAKNNFETDSNVKIAIGHTLEDNSDTIMANIFKGNVIKALEPIKNFNETDVDFKDFKLNL 243

Query: 166 --VTVHTPLMWLKKYETWKLAQDIGGQDLVNLI 196
               +  P++ + + +  K   + G +   +  
Sbjct: 244 KSCCMIRPMLNVSEEKIVKALVECGIEYYHDKD 276


>gi|146278683|ref|YP_001168842.1| argininosuccinate synthase [Rhodobacter sphaeroides ATCC 17025]
 gi|166221013|sp|A4WVX3|ASSY_RHOS5 RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|145556924|gb|ABP71537.1| argininosuccinate synthase [Rhodobacter sphaeroides ATCC 17025]
          Length = 408

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 43/157 (27%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W   +    V T + D GQ  ++E          +   
Sbjct: 1   MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEP--AREKAVMLGIK 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                     +  +           +      + +   ++    +  R +         A
Sbjct: 59  PDNIFIEDVREEFV--RDFVFPMFRANALYEGLYLLGTSIARPLIAKRLVEIAAMTGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         + + Y       + A     +L
Sbjct: 117 VAHGATGKGNDQVRFELTAYALDPAIKVIAPWREWDL 153


>gi|325831243|ref|ZP_08164535.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Eggerthella sp. HGA1]
 gi|325486844|gb|EGC89291.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Eggerthella sp. HGA1]
          Length = 327

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 54/186 (29%), Gaps = 24/186 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +  +     ++  +  ++G   K E E      + +     + 
Sbjct: 37  KKVLLALSGGVDSSVVAALLIKAIGKQLICVHVNHGLMRKGESE------QVVDVFQNQL 90

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +L               +   T      + D   P          F+      A ++G
Sbjct: 91  DANLV--------------YVDATDRFLELLDDVAEPEAKRKIIGAEFIRVFEEEARKVG 136

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                                D ++A      L  +    +  P+  L K E   + +++
Sbjct: 137 DEVSF---LAQGTIYPDILESDGVKAHHNVGGLPDDLQFELCEPVKLLYKDEVRVIGREL 193

Query: 188 GGQDLV 193
           G  + +
Sbjct: 194 GLPEGM 199


>gi|317490418|ref|ZP_07948901.1| GMP synthase domain-containing protein [Eggerthella sp. 1_3_56FAA]
 gi|316910462|gb|EFV32088.1| GMP synthase domain-containing protein [Eggerthella sp. 1_3_56FAA]
          Length = 327

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 54/186 (29%), Gaps = 24/186 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +  +     ++  +  ++G   K E E      + +     + 
Sbjct: 37  KKVLLALSGGVDSSVVAALLIKAIGKQLICVHVNHGLMRKGESE------QVVDVFQNQL 90

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +L               +   T      + D   P          F+      A ++G
Sbjct: 91  DANLV--------------YVDATDRFLELLDDVAEPEAKRKIIGAEFIRVFEEEARKVG 136

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                                D ++A      L  +    +  P+  L K E   + +++
Sbjct: 137 DEVSF---LAQGTIYPDILESDGVKAHHNVGGLPDDLQFELCEPVKLLYKDEVRVIGREL 193

Query: 188 GGQDLV 193
           G  + +
Sbjct: 194 GLPEGM 199


>gi|257791282|ref|YP_003181888.1| GMP synthase, large subunit [Eggerthella lenta DSM 2243]
 gi|257475179|gb|ACV55499.1| GMP synthase, large subunit [Eggerthella lenta DSM 2243]
          Length = 327

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 54/186 (29%), Gaps = 24/186 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +  +     ++  +  ++G   K E E      + +     + 
Sbjct: 37  KKVLLALSGGVDSSVVAALLIKAIGKQLICVHVNHGLMRKGESE------QVVDVFQNQL 90

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +L               +   T      + D   P          F+      A ++G
Sbjct: 91  DANLV--------------YVDATDRFLELLDDVAEPEAKRKIIGAEFIRVFEEEARKVG 136

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                                D ++A      L  +    +  P+  L K E   + +++
Sbjct: 137 DEVSF---LAQGTIYPDILESDGVKAHHNVGGLPDDLQFELCEPVKLLYKDEVRVIGREL 193

Query: 188 GGQDLV 193
           G  + +
Sbjct: 194 GLPEGM 199


>gi|121710280|ref|XP_001272756.1| argininosuccinate synthase [Aspergillus clavatus NRRL 1]
 gi|119400906|gb|EAW11330.1| argininosuccinate synthase [Aspergillus clavatus NRRL 1]
          Length = 416

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 3/65 (4%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          + K    +  FSGG D+S  L W +D    V   + D GQ  + + +       K+  + 
Sbjct: 1  MSKGKVCVA-FSGGLDTSVILKWLIDEGYEVVAFTADVGQ--EEDFDAIREKALKLGAVK 57

Query: 65 PKWKD 69
           +  D
Sbjct: 58 CEIVD 62


>gi|331092233|ref|ZP_08341061.1| GMP synthase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330401665|gb|EGG81244.1| GMP synthase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 513

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 53/187 (28%), Gaps = 21/187 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS            ++  +  D+G   K E +    V            
Sbjct: 217 KVLCALSGGVDSSVAAVMLSKAVGKQLTCVFVDHGLLRKNEGDEVEAV------------ 264

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G +    L  +   +       +A K +               F+      A ++G 
Sbjct: 265 --FGPEGNYDLNFIRVNAQERFYNKLAGKTEPEEKRKII----GEEFIRVFEEEAKKIGA 318

Query: 129 -TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLAQD 186
              +V G    D       +   I++      L        +  PL  L K E  K   +
Sbjct: 319 VDFLVQGTIYPDVIESGLGKSAVIKSHHNVGGLPDCVDFKEIIEPLRDLFKDEVRKAGLE 378

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 379 LGIPEHL 385


>gi|195443094|ref|XP_002069274.1| GK21111 [Drosophila willistoni]
 gi|194165359|gb|EDW80260.1| GK21111 [Drosophila willistoni]
          Length = 684

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 2/56 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIV 61
           +   LLL SGG DSS C +         ++  +  D G   + E E      + I 
Sbjct: 228 SNKVLLLVSGGVDSSVCAALLRRALHPGQIIAVHVDNGFMRQNESEKVERSLRDIG 283


>gi|121634879|ref|YP_975124.1| hypothetical protein NMC1080 [Neisseria meningitidis FAM18]
 gi|120866585|emb|CAM10336.1| hypothetical protein NMC1080 [Neisseria meningitidis FAM18]
          Length = 445

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/196 (12%), Positives = 45/196 (22%), Gaps = 31/196 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELM 64
               +  SGG DS   L   +    R     E L   +G                     
Sbjct: 31  KKTAVALSGGLDSVVLLHLLVRAGKRAGFVPEALHIHHG-----LSPRADDWADFCQNYC 85

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L    +        I  ++  K  A   +           R+     F   +A 
Sbjct: 86  DMLGVGLETVKVCVEKNGLGIEAAARQKRYAAFAEKGFDILALAHHRDDQIETFMLAVAR 145

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G+  +        +                           +  PL+   + + W  A
Sbjct: 146 GGGLRALAAMPAVRPFGEKGI----------------------IWRPLLPFSRQDIWDYA 183

Query: 185 QDIGGQDLVNLILEES 200
           Q  G  ++ +    ++
Sbjct: 184 QKHGLPNIEDESNTDT 199


>gi|120436574|ref|YP_862260.1| GMP synthase [Gramella forsetii KT0803]
 gi|226739625|sp|A0M3J8|GUAA_GRAFK RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|117578724|emb|CAL67193.1| GMP synthase [Gramella forsetii KT0803]
          Length = 509

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 54/186 (29%), Gaps = 19/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DS+             +  +  + G   K E E  L   K +   +   
Sbjct: 214 DKVVLGLSGGVDSTVAAVLLHKAIGKNLYCIFVNNGLLRKNEFESVLDQYKDMGLNVKGV 273

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             S        L  L  +S     +            +     +++++L         + 
Sbjct: 274 DASAR-----FLDALKGLSDPEEKRKAIGNTFIEVFDDEAHEIKDVVYLAQGTIYPDVIE 328

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                        S   +    TI++      L     + +  PL  L K E  ++ +++
Sbjct: 329 -------------SVSVNGPSVTIKSHHNVGGLPDFMKLKIVEPLRMLFKDEVRRVGKEL 375

Query: 188 GGQDLV 193
           G    +
Sbjct: 376 GIDKEL 381


>gi|39995542|ref|NP_951493.1| hypothetical protein GSU0434 [Geobacter sulfurreducens PCA]
 gi|39982305|gb|AAR33766.1| conserved hypothetical protein [Geobacter sulfurreducens PCA]
 gi|298504543|gb|ADI83266.1| thiamin biosynthesis protein ThiI-related adenine nucleotide
          alpha hydrolase superfamily protein [Geobacter
          sulfurreducens KN400]
          Length = 334

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
              AL L SGG DS+  +   L++   VE L+F
Sbjct: 1  MKRKALALLSGGLDSTLAVKVMLEQGIEVEALNF 34


>gi|57640895|ref|YP_183373.1| ATPase [Thermococcus kodakarensis KOD1]
 gi|57159219|dbj|BAD85149.1| predicted ATPase, PP-loop superfamily [Thermococcus kodakarensis
          KOD1]
          Length = 272

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 24/53 (45%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
              L+LFSGG+DSS  L    +    V  L+F +    +  L   +   KK+
Sbjct: 20 EKRVLMLFSGGKDSSLALYILKEAGLDVSALTFFHRWSWRETLNWAMRFTKKL 72


>gi|253570358|ref|ZP_04847767.1| tRNA-specific 2-thiouridylase mnmA 3 [Bacteroides sp. 1_1_6]
 gi|205814939|sp|Q8A0Y3|MNMA3_BACTN RecName: Full=tRNA-specific 2-thiouridylase mnmA 3
 gi|251840739|gb|EES68821.1| tRNA-specific 2-thiouridylase mnmA 3 [Bacteroides sp. 1_1_6]
          Length = 362

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/192 (8%), Positives = 46/192 (23%), Gaps = 11/192 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + ++    L+  SGG DS+       ++   +  ++         E +    +  ++   
Sbjct: 1   MKERNKRVLVGMSGGIDSTATCLMLQEQGYEIVGVTMRVWGD---EPQDARELAARMGIE 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                + +     +    + +                  + N     R +         A
Sbjct: 58  HYVADERIPFKETIVKNFIDEYKQGRTPNP-------CVMCNPLFKFRVLAEWADKLDCA 110

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           Y        +                  ++      LG +       PL    K +  + 
Sbjct: 111 YIATGHYSRLEERSGHIYIVAGDDDKKDQSYF-LWRLGQDILKRCIFPLGDYTKIKVREY 169

Query: 184 AQDIGGQDLVNL 195
             + G +     
Sbjct: 170 LAEKGYEAKSKE 181


>gi|325142381|gb|EGC64790.1| tRNA(Ile)-lysidine synthase [Neisseria meningitidis 961-5945]
          Length = 426

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/196 (12%), Positives = 45/196 (22%), Gaps = 31/196 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELM 64
               +  SGG DS   L   +    R     E L   +G                     
Sbjct: 12  KKTAVALSGGLDSVVLLHLLVRAGKRAGFVPEALHIHHG-----LSPRADDWADFCQNYC 66

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L    +        I  ++  K  A   +           R+     F   +A 
Sbjct: 67  DMLGVGLETVKVCVEKNGLGIEAAARQKRYAAFAEKGFDILALAHHRDDQIETFMLAVAR 126

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G+  +        +                           +  PL+   + + W  A
Sbjct: 127 GGGLRALAAMPAVRPFGEKGI----------------------IWRPLLPFSRQDIWDYA 164

Query: 185 QDIGGQDLVNLILEES 200
           Q  G  ++ +    ++
Sbjct: 165 QKHGLPNIEDESNTDT 180


>gi|297182186|gb|ADI18357.1| argininosuccinate synthase [uncultured actinobacterium
           HF4000_04C13]
          Length = 419

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 50/170 (29%), Gaps = 9/170 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM-PK 66
              +L +SGG D+S  L W  +     V T + D GQ  ++E          + E+    
Sbjct: 18  DKVVLAYSGGLDTSVILRWLEEEYGCEVVTFTADLGQGEELEPARAKAEAMGVSEIYIED 77

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            ++    D++ P+     +         ++           +  R +         A   
Sbjct: 78  LREEFVRDYVFPMFRANALYEGEYLLGTSIARP-------LIAKRLVEIADETGADAISH 130

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
           G T         +   Y       I A     +LG    +  +     + 
Sbjct: 131 GATGKGNDQVRFELGAYALRPDIRIIAPWREWDLGSRQSLLDYAEKHGIP 180


>gi|291043882|ref|ZP_06569598.1| tRNA(Ile)-lysidine synthase [Neisseria gonorrhoeae DGI2]
 gi|291012345|gb|EFE04334.1| tRNA(Ile)-lysidine synthase [Neisseria gonorrhoeae DGI2]
          Length = 445

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/196 (11%), Positives = 42/196 (21%), Gaps = 31/196 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
               +  SGG DS   L              E L   +G                     
Sbjct: 31  KKTAVALSGGLDSVVLLHLLVCAGKRAGFVPEALHIHHG-----LSPRADDWADFCRNYC 85

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L    +        I  ++  K  A   +           R+     F   +A 
Sbjct: 86  DMLGVGLETVKVCVEKNGLGIEAAARQKRYAAFAEKGFDVLALAHHRDDQIETFMLAVAR 145

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G+  +                                    +  PL+   + + W  A
Sbjct: 146 GGGLRALAAMPAVRPLGENGI----------------------IWRPLLPFSRQDIWDYA 183

Query: 185 QDIGGQDLVNLILEES 200
           +  G  ++ +    ++
Sbjct: 184 RKHGLPNIEDESNTDT 199


>gi|269926148|ref|YP_003322771.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Thermobaculum terrenum ATCC BAA-798]
 gi|269789808|gb|ACZ41949.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Thermobaculum terrenum ATCC BAA-798]
          Length = 355

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 44/184 (23%), Gaps = 5/184 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           + ++  SGG DSS   +   D+   V  ++     +   +          +  +      
Sbjct: 3   TVVVAMSGGVDSSVAAAMLRDQGYDVIGVNLRLYSKEDSQAYSLNKQCCTLDSMRDAEAV 62

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                       +       +      +      PN  +     I        A  LG  
Sbjct: 63  CRKLGIPFYALNMEREFTRDVVDYFVSEYLQGKTPNPCLACNAHIKFHHLFERAMALGAD 122

Query: 130 NIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            I  G            +             T   L          P+    K ET +LA
Sbjct: 123 YIATGHYARLRRTESGVKLLTGVDAAKDQSYTLYMLSQRELERTLLPIGEQTKAETRELA 182

Query: 185 QDIG 188
           +  G
Sbjct: 183 RKYG 186


>gi|296109621|ref|YP_003616570.1| GMP synthase, large subunit [Methanocaldococcus infernus ME]
 gi|295434435|gb|ADG13606.1| GMP synthase, large subunit [Methanocaldococcus infernus ME]
          Length = 310

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 58/185 (31%), Gaps = 26/185 (14%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A++  SGG DSS           D++  +  D G   K E E    V +          
Sbjct: 23  KAIIALSGGVDSSVAAVLTHKAIGDKLVAVFVDTGLMRKGEREEVERVFR---------- 72

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D LG + I+              +     ++    P         +F+     +A ++  
Sbjct: 73  DQLGLNLIVV----------DAKERFLEALKGVKDPEEKRKIIGKLFIDIFEEIAEKVKA 122

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G              +        + L     + V  PL  L K E  ++A+ +G
Sbjct: 123 EVLVQGTIA-----PDWIETEGKIKSHHNVALPHGMVLEVVEPLRELYKDEVREVAKALG 177

Query: 189 GQDLV 193
             + +
Sbjct: 178 LPESI 182


>gi|172038179|ref|YP_001804680.1| GMP synthase [Cyanothece sp. ATCC 51142]
 gi|254800094|sp|B1WY30|GUAA_CYAA5 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|171699633|gb|ACB52614.1| GMP synthetase [Cyanothece sp. ATCC 51142]
          Length = 542

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 53/188 (28%), Gaps = 11/188 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +    LL  SGG DSST          D +  +  D G   K E E  + +  K      
Sbjct: 237 RDKRVLLALSGGVDSSTLAFLLHQAIGDNLTCMFIDQGFMRKGEPERLMDIFDK---QFH 293

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              + +             +       +   K +        V       L     LA  
Sbjct: 294 IPVEYVNARDRF-------LKQLEGVTDPEKKRRLIGHEFIQVFEEESKRLGPFDYLAQG 346

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
               +++            +     I++      L  +    +  PL  L K E  K+ +
Sbjct: 347 TLYPDVIESADTNIDPKTGERVAVKIKSHHNVGGLPKDLRFKLVEPLRKLFKDEVRKVGR 406

Query: 186 DIGGQDLV 193
            IG  + +
Sbjct: 407 SIGLPEEI 414


>gi|32266943|ref|NP_860975.1| guanosine monophosphate synthetase GuaA [Helicobacter hepaticus ATCC
            51449]
 gi|44887939|sp|Q7VG78|GUAA_HELHP RecName: Full=Probable GMP synthase [glutamine-hydrolyzing]; AltName:
            Full=GMP synthetase; AltName: Full=Glutamine
            amidotransferase
 gi|32262995|gb|AAP78041.1| guanosine monophosphate synthetase GuaA [Helicobacter hepaticus ATCC
            51449]
          Length = 1375

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 45/185 (24%), Gaps = 15/185 (8%)

Query: 10   SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              L   SGG DSS   +       + +  +  D G   K E E    + K+         
Sbjct: 1077 KVLCAVSGGVDSSVVAALLYRAIGENLIPVFVDTGLLRKGEREAVEKIFKE--------- 1127

Query: 69   DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +          + L       +      +                             G 
Sbjct: 1128 NLKVPLITADASELFLSRLKGVLDPEIKRKIIGETFIEVFEKEAKKHNTKGEIKFLAQG- 1186

Query: 129  TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                    +   S        TI++      L       +  PL  L K E   L +++G
Sbjct: 1187 ----TLYPDVIESVSVKGPSKTIKSHHNVGGLPEWMKFELIEPLRELFKDEVRALGRELG 1242

Query: 189  GQDLV 193
              + +
Sbjct: 1243 MPESM 1247


>gi|329961014|ref|ZP_08299293.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides fluxus YIT 12057]
 gi|328532300|gb|EGF59104.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides fluxus YIT 12057]
          Length = 355

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 49/181 (27%), Gaps = 7/181 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +L SGG DSS  +    ++  R        G+ +   ++C     + +       +    
Sbjct: 5   VLLSGGVDSSVVVHLLCEQGYRPSLFYIRIGRDDTDYMDCS--AEEDLEMASAIARRYGL 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
              ++ L    +   +     +    +        +  + I F  F   +      T   
Sbjct: 63  SLEVVDLH--REYWDNVAAYAIDKIRRGLTPNPDVMCNKLIKFGCFERQVGREFDFTATG 120

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLAQDIGG 189
                    G            +    L    ++ V     PL  L K E   +A   G 
Sbjct: 121 HYATTVLLDGKTWLGTAVDPIKDQTDFLAQIDYLQVSRLMFPLGGLMKQEVRDIALRAGL 180

Query: 190 Q 190
            
Sbjct: 181 P 181


>gi|302667536|ref|XP_003025350.1| hypothetical protein TRV_00473 [Trichophyton verrucosum HKI 0517]
 gi|291189457|gb|EFE44739.1| hypothetical protein TRV_00473 [Trichophyton verrucosum HKI 0517]
          Length = 80

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 3/77 (3%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          + +    LL +SGG D+S  L+W L++   V     D GQ    + +        +    
Sbjct: 1  MAQKEKVLLAYSGGLDTSCILAWLLEQGHEVVCFLADVGQ--AEDFKEAERKALAVGA-K 57

Query: 65 PKWKDSLGEDHILPLAI 81
              + L ++ +  L  
Sbjct: 58 KLVVEDLKKEFVEDLCF 74


>gi|148266282|ref|YP_001232988.1| thiamine biosynthesis protein [Geobacter uraniireducens Rf4]
 gi|146399782|gb|ABQ28415.1| thiamine biosynthesis protein [Geobacter uraniireducens Rf4]
          Length = 334

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
              AL L SGG DS+  +   L++   VE L+F
Sbjct: 1  MQKKALALLSGGLDSTLAVKVMLEQGIAVEALNF 34


>gi|71030526|ref|XP_764905.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Theileria parva strain Muguga]
 gi|68351861|gb|EAN32622.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
           putative [Theileria parva]
          Length = 693

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 47/212 (22%), Gaps = 23/212 (10%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRL------ 54
           M    +      +L SGG DSS  L     R   V          +     C        
Sbjct: 289 MFQSPRSKKRVAVLVSGGVDSSLALWLMKSRAFDVHAFYLKVNDLSNGPGLCASNDISYA 348

Query: 55  -CVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
             V   +   +     S      +   +L D     +  N  +          F+     
Sbjct: 349 MQVCNILGVTLHVLPFSKAYSEHILSGVLDDYRKGEVP-NPDVLCNSRIKFGEFLRMAID 407

Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG------------ 161
               + A+  Y     +          S                + L             
Sbjct: 408 WGFDYVASGHYATLCDDFFTKEQIKSPSSLNGSTSINGYYKIKRLCLSNDTLKDQTYFLS 467

Query: 162 ---MESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
                    +  P+  L K +  + A+ +G  
Sbjct: 468 RLTQNQMSKLIFPIGHLTKSQVREFAKTVGLP 499


>gi|327398348|ref|YP_004339217.1| tRNA-specific 2-thiouridylase mnmA [Hippea maritima DSM 10411]
 gi|327180977|gb|AEA33158.1| tRNA-specific 2-thiouridylase mnmA [Hippea maritima DSM 10411]
          Length = 338

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/140 (11%), Positives = 36/140 (25%), Gaps = 2/140 (1%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +  SGG DS+T           V  ++       +  ++    + + +        D
Sbjct: 2   KVAVALSGGVDSATAAFLLKKEGHEVVGITLKLYDD-ESYIKQAEKIAEFLGIEWH-CFD 59

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E     +    +   +  T N  +        N  +   + +     AT  Y     
Sbjct: 60  YSLEFKKGVIDYFFNTYLNGKTPNPCVVCNRYVKFNYLLEVADKLNCDKLATGHYARISR 119

Query: 130 NIVIGVCETDYSGYPDCRHD 149
            ++            D  + 
Sbjct: 120 KLLNKPLIAKSPSEKDQSYF 139


>gi|325132247|gb|EGC54941.1| tRNA(Ile)-lysidine synthase [Neisseria meningitidis M6190]
          Length = 436

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/196 (12%), Positives = 45/196 (22%), Gaps = 31/196 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELM 64
               +  SGG DS   L   +    R     E L   +G                     
Sbjct: 22  KKTAVALSGGLDSVVLLHLLVRAGKRAGFVPEALHIHHG-----LSPRADDWADFCQNYC 76

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L    +        I  ++  K  A   +           R+     F   +A 
Sbjct: 77  DMLGVGLETVKVCVEKNGLGIEAAARQKRYAAFAEKGFDILALAHHRDDQIETFMLAVAR 136

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G+  +        +                           +  PL+   + + W  A
Sbjct: 137 GGGLRALAAMPAVRPFGEKGI----------------------IWRPLLPFSRQDIWDYA 174

Query: 185 QDIGGQDLVNLILEES 200
           Q  G  ++ +    ++
Sbjct: 175 QKHGLPNIEDESNTDT 190


>gi|313903525|ref|ZP_07836915.1| GMP synthase (glutamine-hydrolyzing) [Thermaerobacter subterraneus
           DSM 13965]
 gi|313466078|gb|EFR61602.1| GMP synthase (glutamine-hydrolyzing) [Thermaerobacter subterraneus
           DSM 13965]
          Length = 524

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 53/185 (28%), Gaps = 17/185 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            AL   SGG DS+            R+  +  D G     E+E          E+     
Sbjct: 228 RALCALSGGVDSTVAAVLVHRAIGPRLACVFVDTGLLRAGEVE----------EVQESLV 277

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E  ++       ++      +   K +        V       L           I
Sbjct: 278 GLGIELRVVDARD-RFLAALDGIADPEAKRKAVGETFIRVFEEEARQLAEELGP-----I 331

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G    D          TI++      L  +    +  PL +L K E  ++ + +G
Sbjct: 332 PFLVQGTTYPDVIESGGGAAATIKSHHNVGGLPPDLAFRLVEPLRYLFKDEVREVGRRLG 391

Query: 189 GQDLV 193
             + V
Sbjct: 392 LPEAV 396


>gi|268601288|ref|ZP_06135455.1| tRNA(Ile)-lysidine synthase [Neisseria gonorrhoeae PID18]
 gi|268585419|gb|EEZ50095.1| tRNA(Ile)-lysidine synthase [Neisseria gonorrhoeae PID18]
          Length = 436

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/196 (11%), Positives = 42/196 (21%), Gaps = 31/196 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
               +  SGG DS   L              E L   +G                     
Sbjct: 22  KKTAVALSGGLDSVVLLHLLVCAGKRAGFVPEALHIHHG-----LSPRADDWADFCRNYC 76

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L    +        I  ++  K  A   +           R+     F   +A 
Sbjct: 77  DMLGVGLETVKVCVEKNGLGIEAAARQKRYAAFAEKGFDVLALAHHRDDQIETFMLAVAR 136

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G+  +                                    +  PL+   + + W  A
Sbjct: 137 GGGLRALAAMPAVRPLGENGI----------------------IWRPLLPFSRQDIWDYA 174

Query: 185 QDIGGQDLVNLILEES 200
           +  G  ++ +    ++
Sbjct: 175 RKHGLPNIEDESNTDT 190


>gi|237711510|ref|ZP_04541991.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides sp. 9_1_42FAA]
 gi|237726033|ref|ZP_04556514.1| tRNA-specific 2-thiouridylase mnmA 2 [Bacteroides sp. D4]
 gi|265752935|ref|ZP_06088504.1| tRNA methyl transferase [Bacteroides sp. 3_1_33FAA]
 gi|229435841|gb|EEO45918.1| tRNA-specific 2-thiouridylase mnmA 2 [Bacteroides dorei 5_1_36/D4]
 gi|229454205|gb|EEO59926.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides sp. 9_1_42FAA]
 gi|263236121|gb|EEZ21616.1| tRNA methyl transferase [Bacteroides sp. 3_1_33FAA]
          Length = 351

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 47/184 (25%), Gaps = 10/184 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIVELM 64
                LL  SGG DSS       D    V  ++F + ++       E    + +++    
Sbjct: 6   PNNKVLLGMSGGTDSSVAALLLQDAGYEVTGITFRFYEKGNDTEYLEDARTLCERLGIPH 65

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             +         +    + +      T        +           + + +   AT  Y
Sbjct: 66  LTYDVRGTFRKTIIDYFINEYMAG-HTPVPCTLCNNYLKWPLLKRISDEMGIYHFATGHY 124

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                        T      D         +  +         +  P+  L K    ++A
Sbjct: 125 VRRRLINGYYHITTGADPDKDQSFFLWGLPQEILQ-------RMLLPMGNLTKARVREIA 177

Query: 185 QDIG 188
            + G
Sbjct: 178 AERG 181


>gi|71280272|ref|YP_267838.1| thiamine biosynthesis protein ThiI [Colwellia psychrerythraea 34H]
 gi|123633537|sp|Q487C7|THII_COLP3 RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|71146012|gb|AAZ26485.1| thiamine biosynthesis protein ThiI [Colwellia psychrerythraea 34H]
          Length = 484

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 59/195 (30%), Gaps = 25/195 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           I      L L SGG DS       + +  R     F+ G            V   + ++ 
Sbjct: 176 IATQEDVLSLMSGGFDSGVSSYQMIKKGARTHYCFFNLGG-------SAHEV--GVKQIS 226

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
               +  G  H +          +   + V  +I +N   +        + +  A  +A 
Sbjct: 227 YYLWNKFGASHKVKF-------FAVDFEPVVAEILENVENSQMGVVLKRMMIRAATKIAE 279

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           R  I  +V G      S       + I  +   +         +  PL    K +   +A
Sbjct: 280 RGKIQALVTGESLGQVSSQTLTNLNVINRVTDTL---------ILRPLAAYDKQDIIDIA 330

Query: 185 QDIGGQDLVNLILEE 199
           + IG ++    I E 
Sbjct: 331 RKIGTEEFSKTIPEY 345


>gi|54022864|ref|YP_117106.1| GMP synthase [Nocardia farcinica IFM 10152]
 gi|81375915|sp|Q5Z1E9|GUAA_NOCFA RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|54014372|dbj|BAD55742.1| putative GMP synthase [Nocardia farcinica IFM 10152]
          Length = 524

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 56/184 (30%), Gaps = 8/184 (4%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A+   SGG DS+   +       DR+  +  D+G     E E          + +     
Sbjct: 219 AICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGEREQVQQ------DFVASTGA 272

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            L     +    LG++   +  +     I    + +     R I+    AA         
Sbjct: 273 KLVTVDAVD-KFLGELKGVTDPEEKRKIIGREFIRSFEDAVRQIVDEQGAAEGKQPEVEF 331

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +    +  PL  L K E   + +++G 
Sbjct: 332 LVQGTLYPDVVESGGGTGTANIKSHHNVGGLPEDLEFELVEPLRLLFKDEVRAVGRELGL 391

Query: 190 QDLV 193
            + +
Sbjct: 392 PEEI 395


>gi|332255357|ref|XP_003276799.1| PREDICTED: argininosuccinate synthase isoform 3 [Nomascus
           leucogenys]
          Length = 525

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 22/50 (44%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
           D +    S +L +SGG D+S  L W  ++   V     + GQ+   E   
Sbjct: 112 DAMSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 161


>gi|330815569|ref|YP_004359274.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia gladioli BSR3]
 gi|327367962|gb|AEA59318.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia gladioli BSR3]
          Length = 390

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 44/190 (23%), Gaps = 10/190 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K    ++  SGG DSS       ++   V  L     + +     C         + +  
Sbjct: 2   KKQRVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQ-----DWIDV 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +      +            +      +      PN  V     I        A  L
Sbjct: 57  VSVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSL 116

Query: 127 GITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           G   I  G                    T         L          PL  + K    
Sbjct: 117 GAETIATGHYARVREREGRFELLKAFDHTKDQSYFLHRLNQAQLSKTLFPLGEMPKTRVR 176

Query: 182 KLAQDIGGQD 191
           ++A+ IG  +
Sbjct: 177 EIAEQIGLPN 186


>gi|289679182|ref|ZP_06500072.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas syringae pv.
           syringae FF5]
          Length = 246

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 48/185 (25%), Gaps = 10/185 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS      +++  +VE L     + +     C    R+ + +      
Sbjct: 2   KRVIVGMSGGVDSSVSAVLLMEQGYQVEGLFMKNWEEDDGTEYC--TAREDLADAQAVCD 59

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + H        +   +     +             +  R  I        A  LG 
Sbjct: 60  KIGIKLHT--ANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFKAFLDYALMLGA 116

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             I  G                              +G E       P+  L+K E   +
Sbjct: 117 DLIATGHYVRRRDIDGRTELLKGLDPNKDQSYFLHAVGGEQIARTLFPVGELEKPEVRAI 176

Query: 184 AQDIG 188
           A+  G
Sbjct: 177 AEKHG 181


>gi|255722577|ref|XP_002546223.1| argininosuccinate synthase [Candida tropicalis MYA-3404]
 gi|240136712|gb|EER36265.1| argininosuccinate synthase [Candida tropicalis MYA-3404]
          Length = 416

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 38/135 (28%), Gaps = 16/135 (11%)

Query: 5   IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + K    + L +SGG D+S  L+W L++   V     + GQ  + + E        I   
Sbjct: 1   MSKGK--VCLAYSGGLDTSVILAWLLEQGYEVIAFLANIGQ--EEDFEAAEKKALAIGA- 55

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                        + + +  +         +       N+          +       +A
Sbjct: 56  ----------TKFVVVDVRKEFVEKVCFPAIQSNAIYENVYLLGTSLARPVIAQAQIKVA 105

Query: 124 YRLGITNIVIGVCET 138
              G   +  G    
Sbjct: 106 EENGCFAVSHGCTGK 120


>gi|237749187|ref|ZP_04579667.1| argininosuccinate synthase [Oxalobacter formigenes OXCC13]
 gi|229380549|gb|EEO30640.1| argininosuccinate synthase [Oxalobacter formigenes OXCC13]
          Length = 407

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 51/157 (32%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  +++   R    K  ++ 
Sbjct: 1   MSDIKKVVLAYSGGLDTSVILKWLQDTYQCEVVTFTADLGQGEELDP-ARQKALKFGIKP 59

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + D L E+ +            + T      +   ++    +  R I         A
Sbjct: 60  ENIFIDDLREEFVRDFVF---PMFRANTIYEGEYLLGTSIARPLIAKRLIEIARETGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         +   Y    +  I A     +L
Sbjct: 117 IAHGATGKGNDQVRFELGAYALMPNIKIIAPWREWDL 153


>gi|119608342|gb|EAW87936.1| argininosuccinate synthetase, isoform CRA_d [Homo sapiens]
          Length = 370

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 22/50 (44%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
          D +    S +L +SGG D+S  L W  ++   V     + GQ+   E   
Sbjct: 39 DAMSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 88


>gi|114627208|ref|XP_001165570.1| PREDICTED: argininosuccinate synthase [Pan troglodytes]
          Length = 452

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 22/50 (44%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
          D +    S +L +SGG D+S  L W  ++   V     + GQ+   E   
Sbjct: 39 DAMSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 88


>gi|117927016|ref|YP_867633.1| argininosuccinate synthase [Magnetococcus sp. MC-1]
 gi|166989393|sp|A0LE34|ASSY_MAGSM RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|117610772|gb|ABK46227.1| argininosuccinate synthase [Magnetococcus sp. MC-1]
          Length = 407

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 51/174 (29%), Gaps = 7/174 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +       +L +SGG D+S  L W  D +   V     D GQ  ++E        +K   
Sbjct: 1   MSNGIDKVVLAYSGGLDTSIILKWLQDEYQCEVVAFCADLGQAEELEP--ARAKAEKFG- 57

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +   + D L E+ +          + + T    +     ++    +  R I         
Sbjct: 58  VKEIYIDDLKEEFVRDFVF---PMYRANTLYEGVYHLGTSIARPLIAKRQIEIANATGAQ 114

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
           A   G T         +   Y       + A     +L     +  +     + 
Sbjct: 115 AVSHGATGKGNDQVRFELGYYALRPDIRVIAPWREWDLTSRDKLFAYAEKHGIP 168


>gi|294339421|emb|CAZ87777.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thiomonas sp. 3As]
          Length = 368

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 45/183 (24%), Gaps = 10/183 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            ++  SGG DSS        +   V  L     + +     C       +        D 
Sbjct: 9   VVVGLSGGVDSSVSAWLLKQQGYTVVGLFMKNWEDDDDSEYCSTRQ-DWLDAAS--VADR 65

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           +G D  +            +      +      PN  V     I        A RLG   
Sbjct: 66  IGID--IEAVNFAAEYKERVFAEFLREYAAGRTPNPDVLCNAEIKFKAFLDHAMRLGADR 123

Query: 131 IVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           I  G                    +         L          P+  L K E  K+A+
Sbjct: 124 IATGHYARVRETDHGFELLRGLDASKDQSYFLHRLNQAQLARTLFPVGELNKTEVRKVAE 183

Query: 186 DIG 188
            IG
Sbjct: 184 TIG 186


>gi|240127089|ref|ZP_04739750.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae SK-93-1035]
 gi|268685447|ref|ZP_06152309.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae SK-93-1035]
 gi|268625731|gb|EEZ58131.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae SK-93-1035]
          Length = 383

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 52/191 (27%), Gaps = 11/191 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN       + ++  SGG DSS   +    +  +V  +     + +  +  C +      
Sbjct: 17  MN-TTSNTSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWENDDNDEYCSIKQ---- 71

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +       +      + +          +      +      PN  V     I      
Sbjct: 72  -DSFDAIAVADIVGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLCNAEIKFKCFL 130

Query: 121 TLAYRLGITNIV--IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWL 175
             A   G   I       +   +G         R  + +  L       +     PL  L
Sbjct: 131 DYAVGQGADTIATGHYARKEVRNGVHYLFKGLDRNKDQSYFLYRLKPFQLERAIFPLGGL 190

Query: 176 KKYETWKLAQD 186
           +K E  +LA +
Sbjct: 191 EKPEVRRLAAE 201


>gi|254463393|ref|ZP_05076809.1| argininosuccinate synthase [Rhodobacterales bacterium HTCC2083]
 gi|206679982|gb|EDZ44469.1| argininosuccinate synthase [Rhodobacteraceae bacterium HTCC2083]
          Length = 406

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 46/158 (29%), Gaps = 7/158 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W   +    V T + D GQ  ++E            EL
Sbjct: 1   MTAPKKVVLAYSGGLDTSIILKWLETEYGCEVVTFTADLGQGEELEPARAK------AEL 54

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           M      + +     +         +      + +   ++    +  R I         A
Sbjct: 55  MGVKDIYIEDVREEFVRDFVFPMFRANAVYEGLYLLGTSIARPLISKRLIEIAEEVGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
              G T         + + Y       + A     +L 
Sbjct: 115 IAHGATGKGNDQVRFELAAYALNPDIKVIAPWREWDLS 152


>gi|126660833|ref|ZP_01731927.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Cyanothece sp. CCY0110]
 gi|126617884|gb|EAZ88659.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Cyanothece sp. CCY0110]
          Length = 542

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 53/188 (28%), Gaps = 11/188 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +    LL  SGG DSST          D +  +  D G   K E E  + +  K      
Sbjct: 237 RDKRVLLALSGGVDSSTLAFLLHQAIGDNLTCMFIDQGFMRKGEPERLMDIFDK---QFH 293

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              + +             +       +   K +        V       L     LA  
Sbjct: 294 IPVEYVNARDRF-------LKQLEGVIDPEKKRRLIGHEFIQVFEEESKRLGPFDYLAQG 346

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
               +++            +     I++      L  +    +  PL  L K E  K+ +
Sbjct: 347 TLYPDVIESADTNIDPKTGERVAVKIKSHHNVGGLPKDLRFKLVEPLRKLFKDEVRKVGR 406

Query: 186 DIGGQDLV 193
            IG  + +
Sbjct: 407 SIGLPEEI 414


>gi|50411729|ref|XP_457073.1| DEHA2B02420p [Debaryomyces hansenii CBS767]
 gi|49652738|emb|CAG85061.1| DEHA2B02420p [Debaryomyces hansenii]
          Length = 416

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 38/135 (28%), Gaps = 16/135 (11%)

Query: 5   IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + K    + L +SGG D+S  L+W L+    V     + GQ    E   R  +       
Sbjct: 1   MSKGK--VCLAYSGGLDTSVILAWLLEEGYEVIAYLANIGQEEDFEEAERKALA------ 52

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  +G    + + +  +         +       N+          +       +A
Sbjct: 53  -------IGATKFVVVDVRKEFVEQVCFPAIQTNAIYENVYLLGTSLARPVIAQAHIKVA 105

Query: 124 YRLGITNIVIGVCET 138
              G   +  G    
Sbjct: 106 EENGCFAVSHGCTGK 120


>gi|291298621|ref|YP_003509899.1| GMP synthase large subunit [Stackebrandtia nassauensis DSM 44728]
 gi|290567841|gb|ADD40806.1| GMP synthase, large subunit [Stackebrandtia nassauensis DSM 44728]
          Length = 516

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 49/186 (26%), Gaps = 16/186 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS   +       D++  +  D+G     E      V K  V +    
Sbjct: 217 KRVLCGLSGGVDSSVAAALVHRAVGDQLTCVFVDHGLLRSGE---AEQVEKDYVAVT--- 270

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                   ++          + L +   +   ++                     A    
Sbjct: 271 ---GINLKVVD------AQETFLKELSGVVDPESKRKIIGREFIRAFENAAREIDAEGPI 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   +               I++      L  +   T+  PL  L K E   +  ++
Sbjct: 322 EYLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPEDLKFTLVEPLRTLFKDEVRAIGTEL 381

Query: 188 GGQDLV 193
           G  + +
Sbjct: 382 GLPESM 387


>gi|205829196|sp|B1WC37|MTU1_RAT RecName: Full=Mitochondrial tRNA-specific 2-thiouridylase 1
 gi|171846652|gb|AAI61991.1| Trmu protein [Rattus norvegicus]
          Length = 441

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/113 (11%), Positives = 28/113 (24%), Gaps = 9/113 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--------QRNKVELECRLCV 56
           +      +   SGG DS+        R  +V  +                  + E    V
Sbjct: 1   MSALRHVVCALSGGVDSAVAALLLRRRGYQVTGVFMKNWDSLDEQGICAADKDCEDAYKV 60

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
            + +     +    + E      +   +      T N  +    +   + F  
Sbjct: 61  CQILDIPFHQVS-YVKEYWNDVFSDFLNEYEKGRTPNPDISCNKHIKFSCFHH 112


>gi|149001781|ref|ZP_01826754.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae SP14-BS69]
 gi|147760239|gb|EDK67228.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae SP14-BS69]
          Length = 266

 Score = 50.3 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 52/194 (26%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            + +    + +    PN  V     I      
Sbjct: 57  KDVVAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYARVARDEDGTVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  KLA++ G
Sbjct: 174 LEKPEVRKLAEEAG 187


>gi|296270802|ref|YP_003653434.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Thermobispora bispora DSM 43833]
 gi|296093589|gb|ADG89541.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Thermobispora bispora DSM 43833]
          Length = 362

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 48/186 (25%), Gaps = 6/186 (3%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           ++    L   SGG DS+   +   +    V  +        +                  
Sbjct: 4   RRKLRVLAAMSGGVDSAVAAARIAEEGHEVVGVHLALSPNPRSHRVGARGCCTLEDARDA 63

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +    +          + +  H  + ++   +      PN  +     I        A  
Sbjct: 64  RRAADVIGIPFYVWD-MAERFHRDVVEDFVSEYAAGRTPNPCLRCNEKIKFSAVLDRALA 122

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL---KKYETWK 182
           LG   +  G       G    R     + + +  LG+ +   +   +  L    K E   
Sbjct: 123 LGFDAVATGHHARLIDGV--LRRSVDASKDQSYVLGVLTREQLKHAIFPLGGSTKAEVRA 180

Query: 183 LAQDIG 188
            A   G
Sbjct: 181 EAARRG 186


>gi|120436453|ref|YP_862139.1| argininosuccinate synthase [Gramella forsetii KT0803]
 gi|117578603|emb|CAL67072.1| argininosuccinate synthase [Gramella forsetii KT0803]
          Length = 395

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/174 (11%), Positives = 47/174 (27%), Gaps = 6/174 (3%)

Query: 9   PSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE--LMP 65
              ++ +SGG D S      + +    V  +S + G  ++ E++      KKI       
Sbjct: 2   KKVVIAYSGGLDTSYCAKYLSEEEKFEVHAVSVNTGGFSEEEIKNIGENAKKIGATSYKN 61

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
               +     ++   I G++  +       + +    +            +         
Sbjct: 62  IDAVTSFYQKVVKYLIFGNVLKNDT---YPLSVSAERIIQAIEIVNYAKKIGAGYIAHGS 118

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            G  N  +          P+    T    +         ++      M   K +
Sbjct: 119 TGAGNDQVRFDMIFQIIAPEIEIITPIRDKQLTRQEEIEYLKSKGVQMNWDKAK 172


>gi|195130901|ref|XP_002009889.1| GI15611 [Drosophila mojavensis]
 gi|193908339|gb|EDW07206.1| GI15611 [Drosophila mojavensis]
          Length = 380

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 56/214 (26%), Gaps = 12/214 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--------RLCVRK 58
              + ++  SGG DS+       +R   V  +       +     C             +
Sbjct: 1   MIRNVVVGISGGVDSAVSAHLLKERGFNVLGVFMRNWDEHDEAGRCSGEQDLKDAEWACR 60

Query: 59  KIVELMPKWK---DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
           ++   + +               L         +        I+ +      +       
Sbjct: 61  RLNIELRQVNYVKQYWTSVFSQFLDDYQQGLTPNPDILCNKHIKFDLFHQHALQTLQYDA 120

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
           +         LG      G   T+                    +   +      PL  L
Sbjct: 121 IATGHYARNSLGDFLEHAGSQMTEDVRLLIPADTFKDQTFFLAGIAQAALRRTMFPLGGL 180

Query: 176 KKYETWKLAQDIGGQDLVNLILEESHTCYLGKRD 209
           KK    +LA+ IG Q  +    E +  C++GKRD
Sbjct: 181 KKTAVKELARRIGLQ-RLAEKRESTGICFVGKRD 213


>gi|197118358|ref|YP_002138785.1| tRNA (5-carboxymethylaminomethyl-2-thio-U34)-thioltransferase
           [Geobacter bemidjiensis Bem]
 gi|197087718|gb|ACH38989.1| tRNA (5-carboxymethylaminomethyl-2-thio-U34)-thioltransferase
           [Geobacter bemidjiensis Bem]
          Length = 359

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 47/187 (25%), Gaps = 11/187 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMP 65
               L+  SGG DSS   +   ++   V  +S    +R +              +++   
Sbjct: 7   KKQILVAMSGGVDSSVTAALLKEQGHDVMGVSLQLYERPESTPSGGKTCCSLTDVMDAAR 66

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             K       ++    L +     +  N   +      PN        I       +A  
Sbjct: 67  VAKRLGIPFEVID---LRERFKELVIDNFTAEYAAGRTPNPCARCNERIKFGLLLDMAAS 123

Query: 126 LGITNIVIGVCETDYSGYPDCRH------DTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            G   +  G          +                    +  E    +  P+  L+K  
Sbjct: 124 FGADLLATGHYARIEQDAEEIYQLLKGLDPGKDQSYFLFGMNQEQLSRIVFPVGNLEKRV 183

Query: 180 TWKLAQD 186
             + A  
Sbjct: 184 VREHAAR 190


>gi|42526204|ref|NP_971302.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Treponema denticola ATCC 35405]
 gi|81570437|sp|Q73PV6|MNMA_TREDE RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|41816316|gb|AAS11183.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Treponema denticola ATCC 35405]
          Length = 366

 Score = 50.3 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 39/129 (30%), Gaps = 6/129 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DS+      +D+   V  ++    Q               I +   K  D
Sbjct: 2   KVLVGLSGGVDSAVAAKLLIDQGYDVTGVTM---QLLPKLSGIYKEQTDDIED-AKKVAD 57

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG  HI+    + +   + +      + +    PN      + I        A + G  
Sbjct: 58  KLGIKHIV--YDMRETFKTEIIDYFVEEYKQGRTPNPCFICNSKIKFGLFLEQALKDGFD 115

Query: 130 NIVIGVCET 138
            I  G    
Sbjct: 116 KIATGHYAK 124


>gi|323466789|gb|ADX70476.1| tRNA-specific 2-thiouridylase mnmA [Lactobacillus helveticus H10]
          Length = 375

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 50/193 (25%), Gaps = 14/193 (7%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIV 61
           ++  +    ++  SGG DSS        +   V  +   ++   +   +       + + 
Sbjct: 1   MVDNSKIRVVVGMSGGVDSSVSALLLKQQGYDVVGVFMKNWDDTDDSGVCTATEDYEDVK 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           ++  K                       + +    + +    PN  V   + I       
Sbjct: 61  KVADKIGIPYYS------INFEKEYWHRVFEYFLNEYKKGRTPNPDVMCNSQIKFKSFLD 114

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTI------RAIETAINLGMESHVTVHTPLMWL 175
            A  L    I +G             H                 L  +    V  PL  L
Sbjct: 115 FAMDLDADYIAMGHYAKTVKDADGLTHMMRPKDGNKDQTYFLNQLNQDQIKKVIFPLANL 174

Query: 176 KKYETWKLAQDIG 188
            K +  ++A   G
Sbjct: 175 TKPQVREIALANG 187


>gi|303229103|ref|ZP_07315905.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Veillonella atypica ACS-134-V-Col7a]
 gi|302516227|gb|EFL58167.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Veillonella atypica ACS-134-V-Col7a]
          Length = 353

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 56/190 (29%), Gaps = 18/190 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV--RKKIVELM 64
                 +  SGG DSS   +  L +  +V  ++           E  L V   KK+ + +
Sbjct: 1   MEKVIAVAMSGGVDSSLTAAMLLKQGYKVFGITLWLWVSGTPYDEVPLAVTDAKKMCDFL 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                   E HI+    +   +            +  N     V     I        A 
Sbjct: 61  ------GIEHHIIDARDVFYENVVDYFVKEYAYGRTPNPC---VFCNKNIKFDLMLNRAL 111

Query: 125 RLGITNIVIGVCETDYSGYPD-----CRHDTIRAIETAINLGMESHV--TVHTPLMWLKK 177
            LG T++V G                 +       ++ +   M   +   +  PL    K
Sbjct: 112 ELGATHMVTGHYAQVNYNEDTGLYELHKGVDPTKDQSYVMYNMNQRILSHIMFPLGGQCK 171

Query: 178 YETWKLAQDI 187
            ET KLA + 
Sbjct: 172 TETRKLAAEY 181


>gi|256850945|ref|ZP_05556334.1| tRNA methyl transferase [Lactobacillus jensenii 27-2-CHN]
 gi|260661159|ref|ZP_05862073.1| tRNA methyl transferase [Lactobacillus jensenii 115-3-CHN]
 gi|282934142|ref|ZP_06339420.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus jensenii 208-1]
 gi|256616007|gb|EEU21195.1| tRNA methyl transferase [Lactobacillus jensenii 27-2-CHN]
 gi|260548096|gb|EEX24072.1| tRNA methyl transferase [Lactobacillus jensenii 115-3-CHN]
 gi|281301756|gb|EFA94022.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus jensenii 208-1]
          Length = 375

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 47/192 (24%), Gaps = 12/192 (6%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           ++  +    ++  SGG DSS       +    V  +             C     +   +
Sbjct: 1   MVDNSKIRVVVGMSGGVDSSVSALLLKEAGYDVVGVFMKNWDDTDDAGVC--TATEDYED 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +           + +            + +    + +    PN  +     I        
Sbjct: 59  VKRVADKIGIPYYSIN---FEKEYWQRVFEYFLSEYKKGRTPNPDIMCNTEIKFKSFLEF 115

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTI------RAIETAINLGMESHVTVHTPLMWLK 176
           A  L    I +G             H                 L  E    V  PL  L 
Sbjct: 116 AMSLDADYIAMGHYAKTVKDKNGVTHMMRPKDGNKDQTYFLSQLSQEQIKHVIFPLANLT 175

Query: 177 KYETWKLAQDIG 188
           K +  ++A+  G
Sbjct: 176 KPQVREIAERAG 187


>gi|212692213|ref|ZP_03300341.1| hypothetical protein BACDOR_01709 [Bacteroides dorei DSM 17855]
 gi|212665090|gb|EEB25662.1| hypothetical protein BACDOR_01709 [Bacteroides dorei DSM 17855]
          Length = 351

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 47/184 (25%), Gaps = 10/184 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIVELM 64
                LL  SGG DSS       D    V  ++F + ++       E    + +++    
Sbjct: 6   PNNKVLLGMSGGTDSSVAALLLQDAGYEVTGITFRFYEKGNDTEYLEDARTLCERLGIPH 65

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             +         +    + +      T        +           + + +   AT  Y
Sbjct: 66  LTYDVRGTFRKTIIDYFINEYMAG-HTPVPCTLCNNYLKWPLLKRISDEMGIYHFATGHY 124

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                        T      D         +  +         +  P+  L K    ++A
Sbjct: 125 VRRRLINGYYHITTGADPDKDQSFFLWGLPQEILQ-------RMLLPMGNLTKARVREIA 177

Query: 185 QDIG 188
            + G
Sbjct: 178 AERG 181


>gi|191639758|ref|YP_001988924.1| argininosuccinate synthase [Lactobacillus casei BL23]
 gi|190714060|emb|CAQ68066.1| Argininosuccinate synthase (Citrulline--aspartate ligase)
           [Lactobacillus casei BL23]
 gi|327383871|gb|AEA55347.1| Argininosuccinate synthase [Lactobacillus casei LC2W]
 gi|327387052|gb|AEA58526.1| Argininosuccinate synthase [Lactobacillus casei BD-II]
          Length = 406

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/171 (11%), Positives = 42/171 (24%), Gaps = 12/171 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                +L +SGG D+S  + W  D+   V  +  + GQ N      +             
Sbjct: 1   MTEKIVLAYSGGLDTSVAIPWLKDKGYEVIAVVLNVGQPNADFDAIQQKAL--------- 51

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              ++G    + +    + +   +   +                   + +     +A+  
Sbjct: 52  ---NVGALDSIVVDAQDEFADHYVAPVIKANALYEGDYPLVSALSRPLIIEHLVKIAHAQ 108

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
             T I  G                    E  I   +          +   K
Sbjct: 109 NATAIAHGSTGKGNDQVRFEAAIHALDPEMKIEAPIRDFHWSREEEIDYAK 159


>gi|157693335|ref|YP_001487797.1| argininosuccinate synthase [Bacillus pumilus SAFR-032]
 gi|194017201|ref|ZP_03055813.1| argininosuccinate synthase [Bacillus pumilus ATCC 7061]
 gi|166989388|sp|A8FG70|ASSY_BACP2 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|157682093|gb|ABV63237.1| argininosuccinate synthase [Bacillus pumilus SAFR-032]
 gi|194011069|gb|EDW20639.1| argininosuccinate synthase [Bacillus pumilus ATCC 7061]
          Length = 403

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          + +    +L +SGG D+S  + W  ++   V     D G
Sbjct: 1  MSQNKKVVLAYSGGLDTSVAVKWLQEQGYEVVACCLDVG 39


>gi|74057362|gb|AAZ97802.1| argininosuccinate synthase [Thiobacillus denitrificans ATCC 25259]
          Length = 456

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 51/157 (32%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  ++E   R    +  ++ 
Sbjct: 48  MSDIKKVVLAYSGGLDTSVILKWLQDTYQCEVVTFTADLGQGEELEP-ARQKALQFGIKP 106

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + D L E+ +            + T      +   ++    +  R I  +      A
Sbjct: 107 EQIYIDDLREEFVRDFVF---PMFRANTVYEGEYLLGTSIARPLIAKRLIEIVNATGADA 163

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         +   Y       + A     +L
Sbjct: 164 ICHGATGKGNDQVRFELGAYALKPDVKVIAPWREWDL 200


>gi|116496233|ref|YP_807967.1| argininosuccinate synthase [Lactobacillus casei ATCC 334]
 gi|239630684|ref|ZP_04673715.1| argininosuccinate synthase [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|301067835|ref|YP_003789858.1| argininosuccinate synthase [Lactobacillus casei str. Zhang]
 gi|122262369|sp|Q033U7|ASSY_LACC3 RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|116106383|gb|ABJ71525.1| argininosuccinate synthase [Lactobacillus casei ATCC 334]
 gi|239526967|gb|EEQ65968.1| argininosuccinate synthase [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|300440242|gb|ADK20008.1| Argininosuccinate synthase [Lactobacillus casei str. Zhang]
          Length = 406

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/171 (11%), Positives = 42/171 (24%), Gaps = 12/171 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                +L +SGG D+S  + W  D+   V  +  + GQ N      +             
Sbjct: 1   MTEKIVLAYSGGLDTSVAIPWLKDKGYEVIAVVLNVGQPNADFDAIQQKAL--------- 51

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              ++G    + +    + +   +   +                   + +     +A+  
Sbjct: 52  ---NVGALDSIVVDAQDEFADHYVAPVIKANALYEGDYPLVSALSRPLIIEHLVKIAHAQ 108

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
             T I  G                    E  I   +          +   K
Sbjct: 109 NATAIAHGSTGKGNDQVRFEAAIHALDPEMKIEAPIRDFHWSREEEIDYAK 159


>gi|240117158|ref|ZP_04731220.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae PID1]
 gi|268602848|ref|ZP_06137015.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae PID1]
 gi|268586979|gb|EEZ51655.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae PID1]
          Length = 383

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 46/191 (24%), Gaps = 11/191 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN       + ++  SGG DSS   +    +  +V  +     + +  +  C +      
Sbjct: 17  MN-TTSNTSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWENDDNDEYCSIKQ---- 71

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +       +      + +          +      +      PN  V     I      
Sbjct: 72  -DSFDAIAVADIVGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLCNAEIKFKCFL 130

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A   G   I  G                              L          PL  L
Sbjct: 131 DYAVGQGADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLKPFQLERAIFPLGGL 190

Query: 176 KKYETWKLAQD 186
           +K E  +LA +
Sbjct: 191 EKPEVRRLAAE 201


>gi|254577235|ref|XP_002494604.1| ZYRO0A05368p [Zygosaccharomyces rouxii]
 gi|238937493|emb|CAR25671.1| ZYRO0A05368p [Zygosaccharomyces rouxii]
          Length = 419

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 5/59 (8%)

Query: 5  IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + K    + L +SGG D+S  L+W L++   V     + GQ  + + +       KI  
Sbjct: 1  MSKGK--VCLAYSGGLDTSVILAWLLEQGYEVVAFLANVGQ--EEDFDAAREKALKIGA 55


>gi|194097878|ref|YP_002000923.1| tRNA-specific 2-thiouridylase MnmA [Neisseria gonorrhoeae
           NCCP11945]
 gi|239998356|ref|ZP_04718280.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae 35/02]
 gi|240016919|ref|ZP_04723459.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae FA6140]
 gi|240079741|ref|ZP_04724284.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae FA19]
 gi|240116431|ref|ZP_04730493.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae PID18]
 gi|240122374|ref|ZP_04735330.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae PID332]
 gi|240125108|ref|ZP_04737994.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae SK-92-679]
 gi|254494442|ref|ZP_05107613.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae 1291]
 gi|260441652|ref|ZP_05795468.1| tRNA-specific 2-thiouridylase MnmA [Neisseria gonorrhoeae DGI2]
 gi|268594219|ref|ZP_06128386.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae 35/02]
 gi|268595888|ref|ZP_06130055.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae FA19]
 gi|268602098|ref|ZP_06136265.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae PID18]
 gi|268680964|ref|ZP_06147826.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae PID332]
 gi|268683706|ref|ZP_06150568.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae SK-92-679]
 gi|291045029|ref|ZP_06570737.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae DGI2]
 gi|193933168|gb|ACF28992.1| Probable tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae NCCP11945]
 gi|226513482|gb|EEH62827.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae 1291]
 gi|268547608|gb|EEZ43026.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae 35/02]
 gi|268549676|gb|EEZ44695.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae FA19]
 gi|268586229|gb|EEZ50905.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae PID18]
 gi|268621248|gb|EEZ53648.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae PID332]
 gi|268623990|gb|EEZ56390.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae SK-92-679]
 gi|291011032|gb|EFE03029.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria gonorrhoeae DGI2]
 gi|317163647|gb|ADV07188.1| tRNA-specific 2-thiouridylase MnmA [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 383

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 46/191 (24%), Gaps = 11/191 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN       + ++  SGG DSS   +    +  +V  +     + +  +  C +      
Sbjct: 17  MN-TTSNTSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWENDDNDEYCSIKQ---- 71

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +       +      + +          +      +      PN  V     I      
Sbjct: 72  -DSFDAIAVADIVGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLCNAEIKFKCFL 130

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A   G   I  G                              L          PL  L
Sbjct: 131 DYAVGQGADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLKPFQLERAIFPLGGL 190

Query: 176 KKYETWKLAQD 186
           +K E  +LA +
Sbjct: 191 EKPEVRRLAAE 201


>gi|159477301|ref|XP_001696749.1| argininosuccinate synthase [Chlamydomonas reinhardtii]
 gi|158275078|gb|EDP00857.1| argininosuccinate synthase [Chlamydomonas reinhardtii]
          Length = 441

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 50/158 (31%), Gaps = 9/158 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +    +L +SGG D+S  L W  D     V T + D GQ  ++E       +  + ++
Sbjct: 37  MGQVKKVVLAYSGGLDTSIILKWLQDTYGCEVVTFTADLGQGEELEPARAKAEKMGVKQI 96

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                ++    D++ P+     +   +     ++           +  R I         
Sbjct: 97  FIDDLREEFVRDYVFPMFRANALYEGTYLLGTSIARP-------LIAKRQIEIAKEVGAD 149

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         +   Y       + A     +L
Sbjct: 150 AVSHGATGKGNDQVRFEVGYYSLKPDIKVIAPWREWDL 187


>gi|322498973|emb|CBZ34045.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 656

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 55/201 (27%), Gaps = 10/201 (4%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVEL------ECR 53
            +        L L SGG DS+ C    L     +RV  +  D+G     E          
Sbjct: 216 RERTSDGQKVLCLASGGVDSTVCAVLLLKALGPERVVCIHIDHGFMRLNESVQVVEALNA 275

Query: 54  LCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
             V   +V+    +  +  E            +      +   K          V  R I
Sbjct: 276 AGVCVHLVQAQEDFAQASTEMTAKGSRAAYTTNKLREVTDPEEKRNIIGNTFMTVCDRVI 335

Query: 114 IFL-VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
             L +    L    G     +    + Y+        T       + L  ++   +  PL
Sbjct: 336 KELQLDVENLLLAQGTLRPDLIESGSKYASVNADSIKTHHNDTAVVRLLRDAG-RIIEPL 394

Query: 173 MWLKKYETWKLAQDIGGQDLV 193
               K E  +L   +G    +
Sbjct: 395 CDYHKDEVRELGARLGIPRHL 415


>gi|294645485|ref|ZP_06723186.1| tRNA methyl transferase [Bacteroides ovatus SD CC 2a]
 gi|292639186|gb|EFF57503.1| tRNA methyl transferase [Bacteroides ovatus SD CC 2a]
          Length = 134

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 10/121 (8%), Positives = 33/121 (27%), Gaps = 10/121 (8%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + ++    L+  SGG DS+       ++   +  ++         E +    + +++   
Sbjct: 1   MEERNKRVLVGMSGGIDSTATCLMLQEQGYEIVGVTMRVWGD---EPQDARELAERMGIE 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                + +     +    + +                  + N     R +         A
Sbjct: 58  HYVADERIPFKETIVKNFIDEYKQGRTPNP-------CVMCNPLFKFRVLTEWADKLNCA 110

Query: 124 Y 124
           +
Sbjct: 111 W 111


>gi|242310240|ref|ZP_04809395.1| argininosuccinate synthase [Helicobacter pullorum MIT 98-5489]
 gi|239523537|gb|EEQ63403.1| argininosuccinate synthase [Helicobacter pullorum MIT 98-5489]
          Length = 407

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 45/163 (27%), Gaps = 6/163 (3%)

Query: 1   MN-DIIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRK 58
           M+ +  K     +L +SGG D+S  L W  D     V T + D GQ  +VE         
Sbjct: 1   MSQENAKNIKKVVLAYSGGLDTSVILKWLGDTYGCEVVTFTADIGQGEEVEP--AREKAL 58

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
           K+             +  +           + T      +   ++    +  R +     
Sbjct: 59  KLGIKPQNIFIEDLREEFI--RDFVFPMFRANTIYEGEYLLGTSIARPLIAKRLVEIAKE 116

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
               A   G T         +   Y       + A      L 
Sbjct: 117 VGADAIAHGATGKGNDQVRFEIGAYALNPDIKVIAPWREWELN 159


>gi|162455579|ref|YP_001617946.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sorangium cellulosum 'So ce 56']
 gi|205828973|sp|A9EXM5|MNMA_SORC5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|161166161|emb|CAN97466.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sorangium cellulosum 'So ce 56']
          Length = 385

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 46/186 (24%), Gaps = 7/186 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +  SGG DSS   +   D    V  ++               C   +      +  D
Sbjct: 23  RVFIAMSGGVDSSVAAARLCDAGYEVVGVTLHLWDYPDDGSVKSRCCAPEDQHDARRVAD 82

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG  H         +    +             P+  V     + L     LA RLG++
Sbjct: 83  HLGIPH--YTFDRRALFREHVVDPFVEAYLAGETPSPCVACNRSVKLRELFPLAERLGVS 140

Query: 130 NIVIGVCETD-----YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            +  G           +     R            L  +    +  PL    K E    A
Sbjct: 141 WVATGHYARVVLEEGGARLYRGRDRHKDQSYFLHMLRSDELSRLLFPLGDSTKDEVRAEA 200

Query: 185 QDIGGQ 190
              G  
Sbjct: 201 IARGLP 206


>gi|146086376|ref|XP_001465531.1| GMP synthase [Leishmania infantum JPCM5]
 gi|321399442|emb|CBZ08655.1| putative GMP synthase [Leishmania infantum JPCM5]
          Length = 656

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 55/201 (27%), Gaps = 10/201 (4%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVEL------ECR 53
            +        L L SGG DS+ C    L     +RV  +  D+G     E          
Sbjct: 216 RERTSDGQKVLCLASGGVDSTVCAVLLLKALGPERVVCIHIDHGFMRLNESVQVVEALNA 275

Query: 54  LCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
             V   +V+    +  +  E            +      +   K          V  R I
Sbjct: 276 AGVCVHLVQAQEDFAQASTEMTAKGSRAAYTTNKLREVTDPEEKRNIIGNTFMTVCDRVI 335

Query: 114 IFL-VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
             L +    L    G     +    + Y+        T       + L  ++   +  PL
Sbjct: 336 KELQLDVENLLLAQGTLRPDLIESGSKYASVNADSIKTHHNDTAVVRLLRDAG-RIIEPL 394

Query: 173 MWLKKYETWKLAQDIGGQDLV 193
               K E  +L   +G    +
Sbjct: 395 CDYHKDEVRELGARLGIPRHL 415


>gi|33152814|ref|NP_874167.1| thiamine biosynthesis protein ThiI [Haemophilus ducreyi 35000HP]
 gi|38372555|sp|Q7VKR6|THII_HAEDU RecName: Full=tRNA sulfurtransferase; AltName: Full=Sulfur carrier
           protein ThiS sulfurtransferase; AltName: Full=Thiamine
           biosynthesis protein thiI; AltName: Full=tRNA
           4-thiouridine synthase
 gi|33149039|gb|AAP96556.1| thiamine biosynthesis protein ThiI [Haemophilus ducreyi 35000HP]
          Length = 484

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 53/182 (29%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +  K +     W   
Sbjct: 180 VLSLISGGFDSGVSSYMFIRRGSRVHYCFFNLGG-------ASHEIGVKQMAY-HIWSRY 231

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                +  +AI  +     + + V        L    V   + I        A R  I  
Sbjct: 232 STSHKVRFVAINFESVVGEILEKVDNGQMGVVLKRMMVRAASQI--------AERFAIQA 283

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           IV G      S         I     ++         V  PL+   K +   LA+ IG  
Sbjct: 284 IVTGEALGQVSSQTLTNLRLIDKAADSL---------VLRPLITHDKEKIIALAKQIGTD 334

Query: 191 DL 192
           D+
Sbjct: 335 DI 336


>gi|331267205|ref|YP_004326835.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus oralis Uo5]
 gi|326683877|emb|CBZ01495.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus oralis Uo5]
          Length = 373

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 52/194 (26%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D  K     ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYARVARDEDGIVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  KLA++ G
Sbjct: 174 LEKPEVRKLAEEAG 187


>gi|308271347|emb|CBX27955.1| Argininosuccinate synthase [uncultured Desulfobacterium sp.]
          Length = 403

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 50/159 (31%), Gaps = 7/159 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +  K    +L +SGG D+S  L W ++ +   V T S D GQ  + EL+      KK   
Sbjct: 1   MSDKIKKIVLAYSGGLDTSVILKWLIETYQCEVITFSADLGQ--EEELDYIDEKAKKTGA 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                K  + +   +        +  +        +   +L    +  R +         
Sbjct: 59  A----KVYIDDLKEVFAKDYVFPAFRANAVYEGKYLLGTSLARPLIAKRQMEIAKIEGAD 114

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
           A   G T         + +         I A     NLG
Sbjct: 115 AVSHGATGKGNDQVRFELTYLAHDPGIKIVAPWREWNLG 153


>gi|227877338|ref|ZP_03995411.1| tRNA-methyltransferase [Lactobacillus crispatus JV-V01]
 gi|256842900|ref|ZP_05548388.1| tRNA methyl transferase [Lactobacillus crispatus 125-2-CHN]
 gi|256848726|ref|ZP_05554160.1| tRNA-specific 2-thiouridylase mnmA [Lactobacillus crispatus
           MV-1A-US]
 gi|262045866|ref|ZP_06018830.1| tRNA methyl transferase [Lactobacillus crispatus MV-3A-US]
 gi|293381734|ref|ZP_06627715.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus crispatus 214-1]
 gi|312977582|ref|ZP_07789329.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus crispatus CTV-05]
 gi|227863194|gb|EEJ70640.1| tRNA-methyltransferase [Lactobacillus crispatus JV-V01]
 gi|256614320|gb|EEU19521.1| tRNA methyl transferase [Lactobacillus crispatus 125-2-CHN]
 gi|256714265|gb|EEU29252.1| tRNA-specific 2-thiouridylase mnmA [Lactobacillus crispatus
           MV-1A-US]
 gi|260573825|gb|EEX30381.1| tRNA methyl transferase [Lactobacillus crispatus MV-3A-US]
 gi|290921781|gb|EFD98802.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus crispatus 214-1]
 gi|310895321|gb|EFQ44388.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus crispatus CTV-05]
          Length = 375

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 50/193 (25%), Gaps = 14/193 (7%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIV 61
           ++  +    ++  SGG DSS        +   V  +   ++   +   +       + + 
Sbjct: 1   MVDNSKTRVVVGMSGGVDSSVSALLLKQQGYDVVGVFMKNWDDTDDSGVCTATEDYEDVK 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           ++  K                       + +    + +    PN  V   + I       
Sbjct: 61  KVADKIGIPYYS------INFEKEYWHRVFEYFLDEYKKGRTPNPDVMCNSQIKFKSFLE 114

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTI------RAIETAINLGMESHVTVHTPLMWL 175
            A  L    I +G             H                 L  E    V  PL  L
Sbjct: 115 FAMDLDADYIAMGHYAKTVKDTNGVTHMMRPKDGNKDQTYFLSQLSQEQISKVIFPLANL 174

Query: 176 KKYETWKLAQDIG 188
            K +  ++A   G
Sbjct: 175 TKPQVREIALANG 187


>gi|257783999|ref|YP_003179216.1| GMP synthase, large subunit [Atopobium parvulum DSM 20469]
 gi|257472506|gb|ACV50625.1| GMP synthase, large subunit [Atopobium parvulum DSM 20469]
          Length = 529

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 52/187 (27%), Gaps = 16/187 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +       D++  +  ++G   K E E    V  K       
Sbjct: 219 NGRVILALSGGVDSSVVAALVHRAIGDQLTCVFVNHGMLRKGEPEMVEQVFCK------- 271

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            + ++   H+       ++           ++        F      +  V         
Sbjct: 272 -QFNVPLIHVHAEERYAELLAGVTEPEKKRRLIGTEFWKVFFDEAQKLDGVQFL------ 324

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                +        +     +  TI++    I      H  +  PL    K E   L   
Sbjct: 325 -AQGTIYPDIIESGARKTGGKAATIKSHHNLIPFPEGVHFDLIEPLDHFFKDEVRALGVS 383

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 384 LGLPENL 390


>gi|254482585|ref|ZP_05095824.1| argininosuccinate synthase [marine gamma proteobacterium HTCC2148]
 gi|214037276|gb|EEB77944.1| argininosuccinate synthase [marine gamma proteobacterium HTCC2148]
          Length = 406

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 50/173 (28%), Gaps = 7/173 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  + W  D +   V T + D GQ  +VE          I E+
Sbjct: 1   MSDVNKVVLAYSGGLDTSVIVRWLQDTYNCEVVTFTADIGQGEEVEPARAKAEAMGIKEI 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     +         + T      +   ++    +  R I         A
Sbjct: 61  ------YIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGASA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
              G T         +   Y       + A     +LG    +  +     + 
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGIQVIAPWREWDLGSRESLMNYCAEHDIP 167


>gi|120403098|ref|YP_952927.1| tRNA-specific 2-thiouridylase MnmA [Mycobacterium vanbaalenii
           PYR-1]
 gi|166235070|sp|A1T6X1|MNMA_MYCVP RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|119955916|gb|ABM12921.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycobacterium vanbaalenii PYR-1]
          Length = 357

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 48/208 (23%), Gaps = 6/208 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE-LMPKWK 68
             L+  SGG DSS   +  +D    V  +                    K       +  
Sbjct: 2   RVLVAMSGGVDSSVAAARMVDAGHDVVGVHLALSSAPGTLRTGSRGCCSKEDAGDARRVA 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D LG    +      D     +  +          PN  V     I     +  A  LG 
Sbjct: 62  DVLGIPFYVW--DFADRFKEDVIDDFVESYARGETPNPCVRCNERIKFSALSARALALGF 119

Query: 129 TNIVIGVCETDYSGY-PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +  G       G                  L  E       P+    K    + A   
Sbjct: 120 DALATGHYARLTDGRLRRAVDHDKDQSYVLAVLTAEQLRHAVFPIGDTPKPAIREEAARR 179

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWG 215
           G          +   C++   D R   G
Sbjct: 180 GLAVADKADSHDI--CFIPSGDTRAFLG 205


>gi|83590931|ref|YP_430940.1| GMP synthase [Moorella thermoacetica ATCC 39073]
 gi|91206810|sp|Q2RGP2|GUAA_MOOTA RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|83573845|gb|ABC20397.1| GMP synthase (glutamine-hydrolyzing) [Moorella thermoacetica ATCC
           39073]
          Length = 516

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 54/187 (28%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS   +       DR+  +  ++G   + E      V++   + M  
Sbjct: 221 NGRVLCALSGGVDSSVAAALVHRAVGDRLTCVFVNHGLLRQGE---AEQVQRAFGQAMGM 277

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +         + G        K +  +            GR               
Sbjct: 278 NIVYVDASRRFLEKLTGVTDPEEKRKIIGHEFIRVFEEEARKLGRVDF------------ 325

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +V G    D           I++      L  +  + +  PL  L K E  ++ ++
Sbjct: 326 ----LVQGTLYPDVIESGTETAAVIKSHHNVGGLPEDMELELIEPLRLLFKDEVRRVGEE 381

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 382 LGLPEEI 388


>gi|172058087|ref|YP_001814547.1| tRNA-specific 2-thiouridylase MnmA [Exiguobacterium sibiricum
           255-15]
 gi|205816866|sp|B1YJE9|MNMA_EXIS2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|171990608|gb|ACB61530.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Exiguobacterium sibiricum 255-15]
          Length = 374

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/194 (11%), Positives = 51/194 (26%), Gaps = 14/194 (7%)

Query: 1   MNDIIKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVR 57
           MN   K     + ++  SGG DSS        +   V  +   ++   ++          
Sbjct: 1   MNTRAKAPEETTVVVGMSGGVDSSVTAYLLKQQGYNVIGIFMKNWDDTDENGFCTATEDY 60

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           + ++ +  +            +    +      T  +             +     I   
Sbjct: 61  EDVIAVANQIGIPYYA-----VNFEKEYWDKVFTYFLDEYKLGRTPNPDVMC-NKEIKFK 114

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPL 172
                A RLG   +  G          + +                 L  +       P+
Sbjct: 115 AFLDHAMRLGADFVATGHYARAVYEDGEHKLLRGVDTNKDQTYFLNQLSQDQIAKAMFPI 174

Query: 173 MWLKKYETWKLAQD 186
             ++K E  K+A++
Sbjct: 175 GHMEKSEVRKIAEE 188


>gi|325269460|ref|ZP_08136077.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella multiformis DSM 16608]
 gi|324988381|gb|EGC20347.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella multiformis DSM 16608]
          Length = 360

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/183 (12%), Positives = 44/183 (24%), Gaps = 7/183 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K     +L SGG DSS  +          +      G   K E +C     + +      
Sbjct: 7   KDKRIAVLLSGGVDSSVVVYELARLGLHPDCFYIRIGPEEKEEWDCSSE--EDMEMATAV 64

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                    I+      +  +      +             +  R I F  F   + +  
Sbjct: 65  AHRFGCRLQIVD--CHKEYWNQVTRYTMEKVKAGFTPNPDVMCNRLIKFGAFDEKMGHGY 122

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH---TPLMWLKKYETWKL 183
            +             G            +    L       +     P+   +K E  ++
Sbjct: 123 DLIATGHYAQTEWIDGRKWLTTSPDPVKDQTDFLAQIYDWQLKKAVFPIGHYEKDEVRRI 182

Query: 184 AQD 186
           A+ 
Sbjct: 183 AEQ 185


>gi|312864108|ref|ZP_07724343.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus vestibularis F0396]
 gi|322515817|ref|ZP_08068761.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus vestibularis ATCC 49124]
 gi|311100340|gb|EFQ58548.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus vestibularis F0396]
 gi|322125703|gb|EFX97025.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus vestibularis ATCC 49124]
          Length = 373

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 49/192 (25%), Gaps = 12/192 (6%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +   +    ++  SGG DSS       ++   V  +             C     +   +
Sbjct: 1   MTDNSKIRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDYKD 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +           + +            + +    + +    PN  V     I        
Sbjct: 59  VAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDY 115

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMWLK 176
           A  LG   +  G             H    A            L  E       PL  L+
Sbjct: 116 AMTLGADYVATGHYAQVVRDEDGIVHMLRGADNNKDQTYFLSQLSQEQLQKTMFPLGHLQ 175

Query: 177 KYETWKLAQDIG 188
           K E  ++A+ +G
Sbjct: 176 KPEVREIAERVG 187


>gi|228477995|ref|ZP_04062606.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus salivarius SK126]
 gi|228250175|gb|EEK09428.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus salivarius SK126]
          Length = 373

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 48/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MTD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A  LG   +  G             H    A            L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYAQVVRDEDGIVHMLRGADNNKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  ++A+  G
Sbjct: 174 LQKPEVREIAERAG 187


>gi|150020613|ref|YP_001305967.1| GMP synthase [Thermosipho melanesiensis BI429]
 gi|226739759|sp|A6LKY1|GUAA_THEM4 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|149793134|gb|ABR30582.1| GMP synthase, large subunit [Thermosipho melanesiensis BI429]
          Length = 513

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 54/181 (29%), Gaps = 14/181 (7%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS           D +  +  D G     E E      +++      
Sbjct: 212 NDKVILGLSGGVDSSVVAMLLHKAIGDNLVPVFVDTGLLRLNEGEEVKENFERLG----- 266

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            K  + +     L  L D+      ++   K +        V     + L+        L
Sbjct: 267 IKIFVVDAKKRFLDALKDV------EDPEEKRKIIGHTFIDVFYETSMQLLEEFGNIKYL 320

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   + E+  S         I+       L  +    +  PL +L K E  K+ + 
Sbjct: 321 AQGTLYPDIIESKVSERK--SAAKIKTHHNVGGLPEKLPFKIIEPLRYLFKDEVRKIGEI 378

Query: 187 I 187
           +
Sbjct: 379 L 379


>gi|289764880|ref|ZP_06524258.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Fusobacterium sp. D11]
 gi|289716435|gb|EFD80447.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Fusobacterium sp. D11]
          Length = 333

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 31/82 (37%), Gaps = 7/82 (8%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVET---LSFDYGQRNKVELECRLCVRKKIV 61
          + +   AL LFSGG DS+  +    ++   V     +S  +G +     E    + K++ 
Sbjct: 1  MMEKIKALALFSGGLDSALAIKVVQEQGIEVIALNFVSHFFGGK----NEKAESMAKQLG 56

Query: 62 ELMPKWKDSLGEDHILPLAILG 83
            +           ++   + G
Sbjct: 57 IKLEYIDFKKRHILVVEDPVYG 78


>gi|156549959|ref|XP_001603273.1| PREDICTED: similar to Argininosuccinate synthetase 1 [Nasonia
          vitripennis]
          Length = 427

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 3/63 (4%)

Query: 2  NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV---RK 58
          + + ++    +L +SGG D+S  L W +++   V     + GQ    E      +    K
Sbjct: 14 STMEEERKKVILAYSGGLDTSCILLWLIEKGYDVIAYVANIGQDEDFEAAREKALSIGAK 73

Query: 59 KIV 61
          K++
Sbjct: 74 KVI 76


>gi|45658118|ref|YP_002204.1| tRNA-specific 2-thiouridylase MnmA [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45601360|gb|AAS70841.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Leptospira interrogans serovar Copenhageni str. Fiocruz
           L1-130]
          Length = 366

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 50/184 (27%), Gaps = 11/184 (5%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETL---SFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
            SGG DS+      ++    V  +   +++Y        +   C  + I +         
Sbjct: 1   MSGGVDSAVTAGLLMEDGYEVIGVNLRTWEYEAPACDTTKKSCCSPEDIRDARDVGISLK 60

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
              +++ +  +                Q    PN  V     +        A  LGI  I
Sbjct: 61  IPFYVIKMEKVFQEKVIDRFIE---DYQHGKTPNPCVECNTFVKFGALFEKAKALGIDKI 117

Query: 132 VIGVCETDYSGYPDCRHDT-----IRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
             G                              L  E+   V  PL  + K E  ++A+ 
Sbjct: 118 ATGHYARIARNGERYAIANGIDVGKNQAYYLYGLSQENLKNVIFPLGEMTKPEVRQIARR 177

Query: 187 IGGQ 190
           +G  
Sbjct: 178 MGLP 181


>gi|297181285|gb|ADI17477.1| predicted tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase, contains the PP-loop ATPase
           domain-protein [uncultured beta proteobacterium
           HF0130_04F21]
          Length = 385

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 51/202 (25%), Gaps = 13/202 (6%)

Query: 3   DIIKK--APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           +IIK       ++  SGG DSS        +  +V  +       +  +  C        
Sbjct: 19  EIIKMITKKHIVIGMSGGVDSSVAAWLLKSQGHKVVGIFMKNWDDDDTDTYCTSKQ---- 74

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            + +     S             +     +  +   +      PN  V   + I      
Sbjct: 75  -DFLDAAAASEIIGIEFDAVSFSNEYRKKVFNDFLHEYSLGRTPNPDVFCNSEIKFKSFL 133

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             +  LG   I  G                    +          L  +       PL  
Sbjct: 134 HHSQNLGADLIATGHYAKTIKNINGEFELHKGKDQNKDQSYFLHRLTQKQLRYTTFPLGQ 193

Query: 175 LKKYETWKLAQDIGGQDLVNLI 196
             K +  KLAQ+IG  +     
Sbjct: 194 YYKKDVRKLAQEIGLPNANKRD 215


>gi|258651487|ref|YP_003200643.1| GMP synthase large subunit [Nakamurella multipartita DSM 44233]
 gi|258554712|gb|ACV77654.1| GMP synthase, large subunit [Nakamurella multipartita DSM 44233]
          Length = 523

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 50/184 (27%), Gaps = 15/184 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DS+   +       D++  +  D+G     E E               
Sbjct: 222 TEKVICALSGGVDSAVAAALVHQAVGDQLTCVFVDHGLLRAGEREQVER----------D 271

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  + G   +   A    ++          K +        V       +  A      L
Sbjct: 272 YVAATGIHLVTVDAEQRFLAALDGITEPETKRKIIGREFIRVFETAAAEINAAEGGVKFL 331

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+           TI++      L  +    +  PL  L K E   L  +
Sbjct: 332 VQGTLYPDVVESGGGTGT----ATIKSHHNVGGLPDDLQFQLVEPLRALFKDEVRALGAE 387

Query: 187 IGGQ 190
           +G  
Sbjct: 388 LGLP 391


>gi|160890963|ref|ZP_02071966.1| hypothetical protein BACUNI_03408 [Bacteroides uniformis ATCC 8492]
 gi|270294278|ref|ZP_06200480.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|317481492|ref|ZP_07940557.1| GMP synthase domain-containing protein [Bacteroides sp. 4_1_36]
 gi|156859184|gb|EDO52615.1| hypothetical protein BACUNI_03408 [Bacteroides uniformis ATCC 8492]
 gi|270275745|gb|EFA21605.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|316902338|gb|EFV24227.1| GMP synthase domain-containing protein [Bacteroides sp. 4_1_36]
          Length = 517

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 21/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS             +  +  D+G                   L+ K
Sbjct: 213 NDRVILGLSGGVDSSVAAVLLHRAIGKNLTCIFVDHG-------------------LLRK 253

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +          L +      +S      ++          + GR+ I +  A       
Sbjct: 254 NEFKNVMHDYECLGLNVIGVDASEKFFKDLEGVTEPEQKRKIIGRDFIEVFDAEAHKIT- 312

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G    D     +    TI++      L  E ++ +  PL WL K E  ++ ++
Sbjct: 313 DARWLAQGTIYPDRIESLNITGKTIKSHHNVGGLPEEMNLRLCEPLQWLFKDEVRRVGRE 372

Query: 187 IGGQDLVN 194
           +G  + + 
Sbjct: 373 LGMPEHLI 380


>gi|254363194|ref|ZP_04979243.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mannheimia haemolytica PHL213]
 gi|153095088|gb|EDN75639.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mannheimia haemolytica PHL213]
          Length = 387

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 38/136 (27%), Gaps = 4/136 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 25  NSKKKVIIGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAAELADAQ 81

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     +A            +  + I F  F    A  
Sbjct: 82  AVADKLG-MKLHKINFAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEYAAED 140

Query: 126 LGITNIVIGVCETDYS 141
           LG   I  G      S
Sbjct: 141 LGADYIATGHYVRRTS 156


>gi|254303789|ref|ZP_04971147.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
 gi|148323981|gb|EDK89231.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
          Length = 362

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 50/185 (27%), Gaps = 17/185 (9%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +  SGG DSST       +   +  ++       K E      V   +            
Sbjct: 28  VAMSGGVDSSTVAYLLKQQGYDIFGVTMKTF---KDEDSDAKKVCDDLG----------I 74

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           E ++L +    +     +   V   +         V  R  I            G   + 
Sbjct: 75  EHYVLDVRD--EFKEKVMDYFVDEYMNGRTPNPCMVCNR-HIKFGKMLDFILSKGANFMA 131

Query: 133 IGVCETDYSGYPDCRHD-TIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
            G      +G      D     +     +  +    +  P+  L+K +  + AQ +G + 
Sbjct: 132 TGHYTKLKNGLLSVGDDSNKDQVYFLSQIEKDRLSKIIFPVGDLEKPKLREFAQQMGVRV 191

Query: 192 LVNLI 196
                
Sbjct: 192 YSKKD 196


>gi|291523444|emb|CBK81737.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain or B
          subunit [Coprococcus catus GD/7]
          Length = 329

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 9  PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
             LL  SGG DSS   +  +     ++  +  ++G   K E E  + V +
Sbjct: 39 KKVLLALSGGVDSSVVAALLIKAIGQQLVCVHVNHGLLRKGEPEQVVEVFR 89


>gi|307719725|ref|YP_003875257.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Spirochaeta thermophila DSM 6192]
 gi|306533450|gb|ADN02984.1| probable tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Spirochaeta thermophila DSM 6192]
          Length = 352

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 48/184 (26%), Gaps = 14/184 (7%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG-E 73
            SGG DSS      L     V  L+F    R     E       +      +    LG E
Sbjct: 3   MSGGVDSSVTAHLLLSAGIEVVGLTF---IRVNTPAEVDHEGFSEEARAAREVASHLGIE 59

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL----GIT 129
            H+L L  L     S + +    + +    PN  V     +        A  +    GI 
Sbjct: 60  HHVLNLHDL---YTSRVLRRAWEEYRSGRTPNPCVLCNRTLKFGHLVRYAREVLRADGIA 116

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL---KKYETWKLAQD 186
                    D  G            E +  L       +      L    K E    A+ 
Sbjct: 117 TGHYARIYVDAEGGVHLMRGKAGTKEQSYFLAQTRPEDLRHAYFPLGDQTKDEIRTYARH 176

Query: 187 IGGQ 190
            G  
Sbjct: 177 HGIP 180


>gi|303260932|ref|ZP_07346881.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae SP14-BS292]
 gi|303269624|ref|ZP_07355383.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae BS458]
 gi|301801084|emb|CBW33752.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae INV200]
 gi|302637769|gb|EFL68255.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae SP14-BS292]
 gi|302640826|gb|EFL71214.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae BS458]
 gi|332077431|gb|EGI87892.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae GA41301]
          Length = 373

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 49/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMW 174
             A  LG   +  G             H                 L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYARVVRDEDGTVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  KLA++ G
Sbjct: 174 LEKPEVRKLAEEAG 187


>gi|169335396|ref|ZP_02862589.1| hypothetical protein ANASTE_01808 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258134|gb|EDS72100.1| hypothetical protein ANASTE_01808 [Anaerofustis stercorihominis DSM
           17244]
          Length = 515

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 52/189 (27%), Gaps = 21/189 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS            ++  +  D+G   K E +    V          
Sbjct: 217 NGKVLCALSGGVDSSVAAVMLAKAVGKQLTCVFVDHGLLRKNEGDEVEAV---------- 266

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G D    L  +           +A                   F+      A ++
Sbjct: 267 ----FGPDGPYDLNFIRANVQQRFYDKLAGVTDPETKRKII----GEEFIRVFEEEAKKI 318

Query: 127 G-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLA 184
           G +  +V G    D       +   I++      L        +  PL  L K E  K  
Sbjct: 319 GTVDFLVQGTIYPDVVESGLDKSAVIKSHHNVGGLPDYVDFKEIIEPLRDLFKDEVRKAG 378

Query: 185 QDIGGQDLV 193
           +++G  + +
Sbjct: 379 KELGIPEYL 387


>gi|154149044|ref|YP_001406760.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter hominis ATCC BAA-381]
 gi|205811613|sp|A7I2L9|MNMA_CAMHC RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|153805053|gb|ABS52060.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter hominis ATCC BAA-381]
          Length = 368

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 47/185 (25%), Gaps = 11/185 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DS+       D    +E         +  +      + +K+ ++      
Sbjct: 2   KILVALSGGVDSAVSAKILKDAGYEIEGCYMK---LHGRDDYHAKNI-EKVQDV-----G 52

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +  E     L +  D         +             +  R  I        A   G  
Sbjct: 53  NFLEIKTHILDLCDDFKREVFEPFLQTYKVGKTPNPCALCNRT-IKFGKFLDFARSKGCD 111

Query: 130 NIVIGVCETDYSGYPDCRHD-TIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
            I  G      +       D +        N+       +  PL  + K +  K A    
Sbjct: 112 KIATGHYAKIENNLIKSAVDLSKDQSYFLANIEPRVIPNIVFPLGNMLKKDVKKFAASFP 171

Query: 189 GQDLV 193
             + +
Sbjct: 172 ELEKI 176


>gi|332295333|ref|YP_004437256.1| Argininosuccinate synthase [Thermodesulfobium narugense DSM
          14796]
 gi|332178436|gb|AEE14125.1| Argininosuccinate synthase [Thermodesulfobium narugense DSM
          14796]
          Length = 400

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 3/64 (4%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               +L +SGG D+S  + W  +++D  V TL+ D GQ  ++E        + +  +  
Sbjct: 1  MKKKVVLAYSGGLDTSVAIKWLQEKYDSEVITLTVDIGQGEEIEPIVEK--ARNVGAIKA 58

Query: 66 KWKD 69
             D
Sbjct: 59 IALD 62


>gi|327401200|ref|YP_004342039.1| hypothetical protein Arcve_1319 [Archaeoglobus veneficus SNP6]
 gi|327316708|gb|AEA47324.1| Conserved hypothetical protein CHP00268 [Archaeoglobus veneficus
           SNP6]
          Length = 257

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 61/195 (31%), Gaps = 41/195 (21%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
               + FSGG DS+T  +           ++         +LE    V ++I        
Sbjct: 14  DRVAIAFSGGVDSATLAALCRKWGIEAIAVTVKTDLMAARDLENAKRVAEEI-------- 65

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G +H++                V   + +N     +   + II  +    +A   G 
Sbjct: 66  ---GIEHVIV------------EVAVPDAVLENTPQRCYYCKKTIIKAIKD--VAESRGF 108

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I     +   +         ++A+E    +           +    K E  ++A+ +G
Sbjct: 109 RVI-----DGTNADDLKDFRPGLKALEEEGVISPW-------AMAGFTKKEIRRVAKSLG 156

Query: 189 GQDLVNLILEESHTC 203
               +++    S++C
Sbjct: 157 ----LSVHNRPSNSC 167


>gi|319892675|ref|YP_004149550.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Staphylococcus pseudintermedius HKU10-03]
 gi|317162371|gb|ADV05914.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Staphylococcus pseudintermedius HKU10-03]
 gi|323464287|gb|ADX76440.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus pseudintermedius ED99]
          Length = 370

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/189 (10%), Positives = 46/189 (24%), Gaps = 11/189 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  +    ++  SGG DSS       ++   V  +             C     +   ++
Sbjct: 1   MTNQNTRVVVGMSGGVDSSVTAHLLKEQGYDVIGIFMKNWDDTDEFGVC--TATEDYNDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +          + +            +      + +    PN  V     I        A
Sbjct: 59  IAVCNQIGIPYYAVN---FEKEYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLDHA 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLKK 177
            +LG   +  G                             + +       V  P+  + K
Sbjct: 116 LKLGADYVATGHYARVRHHEDGSVEMLRGVDNNKDQTYFLNQLTEAQLSKVMFPIGDIDK 175

Query: 178 YETWKLAQD 186
            +  ++A +
Sbjct: 176 QKVREIALE 184


>gi|315303264|ref|ZP_07873908.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria ivanovii FSL F6-596]
 gi|313628376|gb|EFR96865.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria ivanovii FSL F6-596]
          Length = 371

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/185 (11%), Positives = 48/185 (25%), Gaps = 12/185 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS       ++   V  +   ++   ++  +       + ++ +  +  
Sbjct: 9   RVVVGMSGGVDSSVTAHLLKEQGYDVIGIFMKNWDDTDEFGVCTATEDYEDVIRVANQIG 68

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                     +    +      T  +             +     I        A  LG 
Sbjct: 69  IPYYA-----VNFEKEYWDKVFTYFLNEYKLGRTPNPDVMC-NKEIKFKAFLEHAESLGA 122

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +  G          +        +          L  E    V  PL  ++K E  ++
Sbjct: 123 DFVATGHYAQVKQVGDEIELLRGVDNNKDQTYFLNQLSQEQLQKVMFPLGGMEKSEVREI 182

Query: 184 AQDIG 188
           A   G
Sbjct: 183 ATKAG 187


>gi|239787512|emb|CAX83982.1| Argininosuccinate synthase [uncultured bacterium]
          Length = 402

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 54/173 (31%), Gaps = 7/173 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           ++      +L +SGG D+S  L W  D     V T + D GQ  ++E        + +  
Sbjct: 1   MMGDVKKVVLAYSGGLDTSIILRWLQDTYGCEVITFTADIGQGEELEP--ARKKAEAMG- 57

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +   + + L E+ +            + T      +   ++    +  R I   +     
Sbjct: 58  IKQIFIEDLREEFVRDYVF---PMFRANTVYEGCYLLGTSIARPLIAKRQIEIAIATGAD 114

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
           A   G T         +   Y       + A     +L   S +  +     L
Sbjct: 115 AVSHGATGKGNDQVRFELGYYALKPDIKVIAPWREWDLKSRSDMVAYAEQHQL 167


>gi|227514810|ref|ZP_03944859.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus fermentum ATCC 14931]
 gi|260663608|ref|ZP_05864497.1| tRNA methyl transferase [Lactobacillus fermentum 28-3-CHN]
 gi|227086800|gb|EEI22112.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus fermentum ATCC 14931]
 gi|260551834|gb|EEX24949.1| tRNA methyl transferase [Lactobacillus fermentum 28-3-CHN]
          Length = 377

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 47/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS        +   V  +             C     +  
Sbjct: 1   MTD--NSHTRVVVGMSGGVDSSVTALLLKQQGYDVVGVFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            +      + +    PN  V     I      
Sbjct: 57  KDVAKVATQIGIPYYSVN---FEKEYWDRVFTYFIDEFKKGRTPNPDVICNKEIKFKAFI 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A +LG   +  G             H      +T         L       V  PL  
Sbjct: 114 EYANQLGADYVATGHYADLKRDEAGNMHLMRAKDQTKDQTYFLSQLDHAQLDKVLFPLAG 173

Query: 175 LKKYETWKLAQDIG 188
             K E  +LA+D G
Sbjct: 174 YTKKEVRQLAKDAG 187


>gi|170017521|ref|YP_001728440.1| argininosuccinate synthase [Leuconostoc citreum KM20]
 gi|229889880|sp|B1MZP4|ASSY_LEUCK RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|169804378|gb|ACA82996.1| Argininosuccinate synthase [Leuconostoc citreum KM20]
          Length = 410

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 1/68 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L +SGG D+S  + W  ++   V  +  + GQ +  ++        K+      
Sbjct: 1  MTEKLVLAYSGGLDTSVAIPWLKEKGYDVIAVVLNVGQ-HGKDMVAIQEKALKVGASQSI 59

Query: 67 WKDSLGED 74
            D+  E 
Sbjct: 60 VIDAQAEF 67


>gi|161507327|ref|YP_001577281.1| tRNA-specific 2-thiouridylase MnmA [Lactobacillus helveticus DPC
           4571]
 gi|205816860|sp|A8YUQ2|MNMA_LACH4 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|160348316|gb|ABX26990.1| tRNA-methyltransferase [Lactobacillus helveticus DPC 4571]
          Length = 375

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 50/193 (25%), Gaps = 14/193 (7%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIV 61
           ++  +    ++  SGG DSS        +   V  +   ++   +   +       + + 
Sbjct: 1   MVDNSKTRVVVGMSGGVDSSVSALLLKQQGYDVVGVFMKNWDDTDDSGVCTATEDYEDVK 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           ++  K                       + +    + +    PN  V   + I       
Sbjct: 61  KVADKIGIPYYS------INFEKEYWHRVFEYFLNEYKKGRTPNPDVMCNSQIKFKSFLD 114

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTI------RAIETAINLGMESHVTVHTPLMWL 175
            A  L    I +G             H                 L  +    V  PL  L
Sbjct: 115 FAMDLDADYIAMGHYAKTVKDADGLTHMMRPKDGNKDQTYFLSQLNQDQIKKVIFPLANL 174

Query: 176 KKYETWKLAQDIG 188
            K +  ++A   G
Sbjct: 175 TKPQVREIALANG 187


>gi|297616780|ref|YP_003701939.1| GMP synthase, large subunit [Syntrophothermus lipocalidus DSM
           12680]
 gi|297144617|gb|ADI01374.1| GMP synthase, large subunit [Syntrophothermus lipocalidus DSM
           12680]
          Length = 510

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 55/188 (29%), Gaps = 22/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS   +   L     +  +  D+G   K E      V +   E    
Sbjct: 215 QKKVLCALSGGVDSSVAAALVDLAVGKNLTCVFVDHGLLRKGE---AEQVVRTFREERGM 271

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +       L  L  ++   L + +                    F+      A +L
Sbjct: 272 NLIYVDAAQRF-LDKLQGVADPELKRKIIGHE----------------FIRVFEEEARKL 314

Query: 127 G-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           G I  +V G    D          TI+       L  +    +  PL  L K E  ++ +
Sbjct: 315 GQIDFLVQGTLYPDVIESGTATAATIKTHHNVGGLPEDMQFELIEPLRLLFKDEVRRIGE 374

Query: 186 DIGGQDLV 193
            +G    +
Sbjct: 375 QLGLPPEI 382


>gi|297205825|ref|ZP_06923220.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus jensenii JV-V16]
 gi|297148951|gb|EFH29249.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus jensenii JV-V16]
          Length = 375

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 47/192 (24%), Gaps = 12/192 (6%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           ++  +    ++  SGG DSS       +    V  +             C     +   +
Sbjct: 1   MVDNSKIRVVVGMSGGVDSSVSALLLKEAGYDVVGVFMKNWDDTDDAGVC--TATEDYED 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +           + +            + +    + +    PN  +     I        
Sbjct: 59  VKRVADKIGIPYYSIN---FEKEYWQRVFEYFLSEYKKGRTPNPDIMCNTEIKFKSFLEF 115

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTI------RAIETAINLGMESHVTVHTPLMWLK 176
           A  L    I +G             H                 L  E    V  PL  L 
Sbjct: 116 AMSLDADYIAMGHYAKTVKDKNGVTHMMRPKDGNKDQTYFLSQLSQEQIKHVIFPLANLT 175

Query: 177 KYETWKLAQDIG 188
           K +  ++A+  G
Sbjct: 176 KPQVREIAERSG 187


>gi|323700722|ref|ZP_08112634.1| GMP synthase, large subunit [Desulfovibrio sp. ND132]
 gi|323460654|gb|EGB16519.1| GMP synthase, large subunit [Desulfovibrio desulfuricans ND132]
          Length = 514

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 52/186 (27%), Gaps = 18/186 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +L  SGG DS+             +  +  D G     E E              +  
Sbjct: 219 KVVLGLSGGIDSTVAAVMLHKAIGKNLHCIFVDNGLLRMGERE--------------EVI 264

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             L E   L +     +  SS   +    ++D       +  + I      A     +  
Sbjct: 265 GFLAEHFDLNV---KMVDASSEFLDNLKGVEDPEKKRKIIGHKFIEVFDREAKAIKGVEF 321

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   S         I++      L    ++ +  PL  L K E  + A ++G
Sbjct: 322 LGQGTLYPDVIESESFKGPSAVIKSHHNVGGLPETMNLKLVEPLRELFKDEVRRAAYELG 381

Query: 189 GQDLVN 194
             + + 
Sbjct: 382 LPEHII 387


>gi|319956881|ref|YP_004168144.1| argininosuccinate synthase [Nitratifractor salsuginis DSM 16511]
 gi|319419285|gb|ADV46395.1| argininosuccinate synthase [Nitratifractor salsuginis DSM 16511]
          Length = 443

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 51/162 (31%), Gaps = 7/162 (4%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
           M+   K+   A+L +SGG D+S  L W  D     V T + D GQ  +VE   R    + 
Sbjct: 1   MSK--KEIKKAVLAYSGGLDTSIILKWLQDEYGCEVVTFTADLGQGEEVEP-ARQKALQL 57

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
            ++    + + L E+ +            +        +   ++    +  + I      
Sbjct: 58  GIKPENIFIEDLREEFVRDFVF---PMFRANAIYEGEYLLGTSIARPLIAKKQIEIAHKT 114

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
              A   G T         +           + A     +L 
Sbjct: 115 GADAVAHGATGKGNDQVRFELGYLSLDPEIAVIAPWREWDLN 156


>gi|262306005|gb|ACY45595.1| gln amidotransferase [Ammothea hilgendorfi]
          Length = 197

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 2/63 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               L+L SGG DS+ C +      + ++V  +  D G   K E +      +K+   + 
Sbjct: 43  HNKVLMLVSGGVDSTVCAALLHKALQPNQVLAVHIDNGFMRKDESKHVESSLRKLNLQLS 102

Query: 66  KWK 68
              
Sbjct: 103 VVN 105


>gi|33866156|ref|NP_897715.1| tRNA-specific 2-thiouridylase MnmA [Synechococcus sp. WH 8102]
 gi|81572928|sp|Q7TTU4|MNMA_SYNPX RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|33639131|emb|CAE08137.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Synechococcus sp. WH 8102]
          Length = 396

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 52/186 (27%), Gaps = 15/186 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +  SGG DSS   +  ++    VE L+        +      C  + +V+     + 
Sbjct: 31  RVAVGLSGGVDSSLTAALLVEAGWEVEGLTL------WLMSGKGACCAEGLVDAAGICEQ 84

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                H++            + + V    +           R++ F       A   G+ 
Sbjct: 85  LGIPHHVVDTRDTFQREI--VQRLVDGYREGITPLPCSQCNRSVKFGPMLDWAAEERGLP 142

Query: 130 NIVIGVCETDYSGYPDCRHD-------TIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
            I  G       G    RH                 +L  E    +  PL  L K +T  
Sbjct: 143 RIATGHYARIRHGGEQGRHQLLRGLDSRKDQSYFLYDLPQEVLGRIVFPLGELTKADTRG 202

Query: 183 LAQDIG 188
            A   G
Sbjct: 203 EAARHG 208


>gi|331017263|gb|EGH97319.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 366

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 35/135 (25%), Gaps = 5/135 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS      +++  +VE L     + +     C    R+ + +      
Sbjct: 2   KRVIVGMSGGVDSSVSAVLLMEQGYQVEGLFMKNWEEDDGTEYC--TAREDLADAQAVCD 59

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + H        +   +     +             +  R  I        A  LG 
Sbjct: 60  RIGIKLHT--ANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFKAFLDYALMLGA 116

Query: 129 TNIVIGVCETDYSGY 143
             I  G         
Sbjct: 117 DLIATGHYVRRRDID 131


>gi|303247112|ref|ZP_07333387.1| argininosuccinate synthase [Desulfovibrio fructosovorans JJ]
 gi|302491538|gb|EFL51423.1| argininosuccinate synthase [Desulfovibrio fructosovorans JJ]
          Length = 397

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 59/196 (30%), Gaps = 9/196 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI-VE 62
           +      +L +SGG D+S  L W    +   V T++ D GQ  +++      +R      
Sbjct: 1   MSAIKKVVLAYSGGLDTSVILKWIKKTYDCEVITVTCDLGQEEELDGLEEKALRTGASKA 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
            +   ++   +D I P+   G +         ++           +  R +         
Sbjct: 61  YIDDLREEFAKDFIFPMLRAGAVYEGRYLLGTSIARP-------LIAKRLVDVARAEGAQ 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A   G T         + +           A     +    + +        +      K
Sbjct: 114 AVAHGATGKGNDQVRFELTTGVLAPDLRTIAPWREWDFASRTDLINFAKQNGIPVPSDKK 173

Query: 183 LAQDIGGQDLVNLILE 198
            +     ++L++L  E
Sbjct: 174 GSDHSMDRNLLHLSFE 189


>gi|255326899|ref|ZP_05367975.1| GMP synthase [Rothia mucilaginosa ATCC 25296]
 gi|255296116|gb|EET75457.1| GMP synthase [Rothia mucilaginosa ATCC 25296]
          Length = 530

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 52/187 (27%), Gaps = 11/187 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DSS   +       D++     D+G   + E E          ++   
Sbjct: 225 SDRVICALSGGVDSSVAAALVHKAVGDQLTCFFIDHGLLREGERE----------QVEQD 274

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  S+G   I        +S          K +                L+  A      
Sbjct: 275 YAASMGIKVITIDESERFLSALDGITEPEAKRKAIGREFIRSFEEAQRKLIAEAGEEGAD 334

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +               I++      L  +    +  PL  L K E   + ++
Sbjct: 335 IKFLVQGTLYPDVVESGGGDGTANIKSHHNVGGLPDDLTFELVEPLRTLFKDEVRAIGRE 394

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 395 LGVPEKI 401


>gi|237716742|ref|ZP_04547223.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides sp. D1]
 gi|229442725|gb|EEO48516.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides sp. D1]
          Length = 368

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/176 (13%), Positives = 47/176 (26%), Gaps = 10/176 (5%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIVELMPKWKDSLG 72
            SGG DSS      L+    V  ++F + + N      E    + +++      +     
Sbjct: 1   MSGGTDSSVAAMRLLEAGYEVIGVTFRFYELNGSTEYLEDARNLAERLGIRHITYDAREI 60

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
               +    + +      T        +           + + + + AT  Y   I    
Sbjct: 61  FARQIIEYFVQEYLAG-RTPVPCTLCNNYLKWPLLAKIADEMGIFYIATGHYAQNIQLNE 119

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                       D         +  +N        +  P+  + K E    A + G
Sbjct: 120 TFYITYAADSDKDQTFFLWGLKQDILN-------RMLLPMGDITKAEARAWAAEHG 168


>gi|194398405|ref|YP_002036838.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pneumoniae G54]
 gi|229487424|sp|B5E605|MNMA_STRP4 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|194358072|gb|ACF56520.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae G54]
          Length = 373

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 53/194 (27%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D  K     ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            + +    + +    PN  V     I      
Sbjct: 57  KDVVAVADQIGIPYYSVN---FEKEYWDRVFEYXXAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYARVARDEDGTVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  KLA++ G
Sbjct: 174 LEKPEVRKLAEEAG 187


>gi|198423337|ref|XP_002126319.1| PREDICTED: similar to GMP synthase [glutamine-hydrolyzing]
           (Glutamine amidotransferase) (GMP synthetase) [Ciona
           intestinalis]
          Length = 719

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 56/199 (28%), Gaps = 15/199 (7%)

Query: 8   APSALLLFSGGQDSSTCL---SWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
               L+L SGG DS+        ALD   +V  +  D G   K E +  L   K +   +
Sbjct: 260 KSKVLVLVSGGVDSTVLATLCYKALDAT-QVVAIHVDNGFMRKNESQEVLKALKLVNVDV 318

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                S    +      +    H     N  +  Q            +   +    + A+
Sbjct: 319 KLVNASNTFYNSTTTLYVKHAKHKERKVNSRVLCQTLYPEEKRKIIGDTF-MNIVDSEAH 377

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV----------TVHTPLMW 174
            LG+T     + +             + +          +             V  PL  
Sbjct: 378 ALGLTIDDCFLAQGTLRPDLIESASKLVSSNADAIKTHHNDTELVRALRARGRVLEPLRD 437

Query: 175 LKKYETWKLAQDIGGQDLV 193
             K E   L + +G  + +
Sbjct: 438 FHKDEVRMLGRRLGLPEDL 456


>gi|117926424|ref|YP_867041.1| hypothetical protein Mmc1_3145 [Magnetococcus sp. MC-1]
 gi|117610180|gb|ABK45635.1| conserved hypothetical protein [Magnetococcus sp. MC-1]
          Length = 346

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 43/138 (31%), Gaps = 11/138 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG---QRNKVELECRLCVRKKIV 61
           + K+  AL L SGG DS       +++   V  ++F  G   Q +   +  +        
Sbjct: 1   MSKS-RALGLLSGGLDSMLATKLLMEQDIEVHCVNFYTGFCVQSHTGAIRAKAGDPPPKH 59

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           + +   +    + HI+ ++           + V                  I  +  A  
Sbjct: 60  DALHAAQILGIKLHIVDIS-------EEYVEIVTNPKYGYGKNLNPCMDCKIFMIKKAWA 112

Query: 122 LAYRLGITNIVIGVCETD 139
           L  +LG   +  G     
Sbjct: 113 LKEQLGFDFLFTGEVVGQ 130


>gi|45358795|ref|NP_988352.1| PP-loop domain-containing protein [Methanococcus maripaludis S2]
 gi|45047661|emb|CAF30788.1| conserved hypothetical protein [Methanococcus maripaludis S2]
          Length = 296

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/200 (12%), Positives = 52/200 (26%), Gaps = 15/200 (7%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVE-TLSFDYGQRNKVELECRLCVRKKIV 61
           ++  K    +++ SGG+DS+  L+ A D    V   + F +     +       +  +  
Sbjct: 33  ELNLKDEKIIVMLSGGKDSAVSLAIAKDLGLNVHLCVHFVHKWSWDISTNEAKKLADRFN 92

Query: 62  ----------ELMPKWKDSLGE-DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPG 110
                     EL  K + + G+    +   I+            A  I         + G
Sbjct: 93  VPIIFPDITEELAKKTQGAKGKSICRICKTIMKARMMDIAKVENAKIIMTGETALEKIAG 152

Query: 111 RNIIFLVFAATLAYRLGITNIVIGV---CETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
               ++        R     +   +              R           NL     + 
Sbjct: 153 PVFQYIRENNASVKRKDEFELYKKMEITKVPKRYKIHFFRPLIRVGHFDVFNLQKYYKID 212

Query: 168 VHTPLMWLKKYETWKLAQDI 187
           +        K   W+    +
Sbjct: 213 IKRVSEAGNKIGYWREGCCL 232


>gi|303235866|ref|ZP_07322469.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Prevotella disiens FB035-09AN]
 gi|302483739|gb|EFL46731.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Prevotella disiens FB035-09AN]
          Length = 513

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 21/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS C +         +  +  D+G   K E    +   + +   +  
Sbjct: 212 NDRVILGLSGGVDSSVCATLLNRAIGKNLTCIFVDHGMLRKNEFAKVMEAYEGLG--LNV 269

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 E     LA +                  +      + GR+ + +  A       
Sbjct: 270 IGVDASEKFFADLAGV-----------------TDPEQKRKIIGRDFVEVFNAEAKKIT- 311

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G    D           I++      L  E ++ +  PL WL K E  ++  +
Sbjct: 312 DAKWLAQGTIYPDRIESLSITGMVIKSHHNVGGLPKEMNLKLCEPLQWLFKDEVRRVGYE 371

Query: 187 IGGQDLVN 194
           +G  + + 
Sbjct: 372 LGMPERLI 379


>gi|296315198|ref|ZP_06865139.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria polysaccharea ATCC 43768]
 gi|296837925|gb|EFH21863.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria polysaccharea ATCC 43768]
          Length = 367

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 46/191 (24%), Gaps = 11/191 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN       + ++  SGG DSS   +    +  +V  +     + +  +  C +      
Sbjct: 1   MN-TTSDPSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWEDDDNDEYCSIKQ---- 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +       +      + +          +      +      PN  V     I      
Sbjct: 56  -DSFDAIAVADIVGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLCNAEIKFKCFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A   G   I  G                              L          PL  L
Sbjct: 115 DYAVVQGADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLKPFQLERAIFPLGGL 174

Query: 176 KKYETWKLAQD 186
           +K E  +LA +
Sbjct: 175 EKPEVRRLAAE 185


>gi|226324447|ref|ZP_03799965.1| hypothetical protein COPCOM_02228 [Coprococcus comes ATCC 27758]
 gi|225206895|gb|EEG89249.1| hypothetical protein COPCOM_02228 [Coprococcus comes ATCC 27758]
          Length = 406

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 61/212 (28%), Gaps = 23/212 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L +SGG D++T + W  + F   V     D GQ  +++         K+     
Sbjct: 1   MKEKVVLAYSGGLDTTTLIPWLKETFDYEVICCCIDCGQGEELDGLDERA---KLAGASK 57

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            + + + +D      +       +        +   ++    +  R +         A  
Sbjct: 58  LYIEDITDDFCDNYIM---PCVQANAVYENAYLLGTSMARPAISKRLVEVARKEGATAIC 114

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G T         + S         I A     +L                + +     +
Sbjct: 115 HGATGKGNDQIRFELSIMALAPDLKIIAPWRMTDL-----------WTLQSRDDEIAYCK 163

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
             G    ++L  + SH+ Y   R+  +    G
Sbjct: 164 AHG----IDLPFDASHS-YSRDRNLWHISHEG 190


>gi|218283935|ref|ZP_03489803.1| hypothetical protein EUBIFOR_02399 [Eubacterium biforme DSM 3989]
 gi|218215514|gb|EEC89052.1| hypothetical protein EUBIFOR_02399 [Eubacterium biforme DSM 3989]
          Length = 394

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/186 (10%), Positives = 44/186 (23%), Gaps = 27/186 (14%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DS   L     +   +     +Y  +++   +    + K   E       
Sbjct: 3   KCVVACSGGPDSMALLDQLNKQGKDIVVAHVNY--KHRDTADRDENIVKDYCEKYDIPVR 60

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                H                       +  N        R           A+   I 
Sbjct: 61  VCYPVH-----------------------EKGNFQAWARDVR--YAFFEEVADAFDAKIL 95

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   + +   +       + I          +     +  PL+   K E  +   + G 
Sbjct: 96  YVAHQMDDVIETYLFQKNRNMICDWYGLKEKSIRQGYQIIRPLLNFTKSELQQYCNENGV 155

Query: 190 QDLVNL 195
              ++ 
Sbjct: 156 SFGIDE 161


>gi|170290743|ref|YP_001737559.1| GMP synthase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174823|gb|ACB07876.1| GMP synthase, large subunit [Candidatus Korarchaeum cryptofilum
           OPF8]
          Length = 504

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 52/186 (27%), Gaps = 21/186 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DS+     A     D+V  +  ++G   K E E  L   K I       
Sbjct: 212 KKVLAAVSGGVDSTVSTLLASRVAGDKVVPVFVNHGLLRKGEAESVLSSLKSIG------ 265

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    + +  +        +       +        +  R    +           
Sbjct: 266 ---------IDVIYVDASEEFLSSLKGIKDCEKKREIIGEIFARIFSEISEREGC----- 311

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   +         +   D I++      L       V  PL +L K E  KLA+ +
Sbjct: 312 DCLLQGTLYPDVVESGAEIGADRIKSHHNVAGLPPWFKGRVLEPLRYLYKDEVRKLAKYL 371

Query: 188 GGQDLV 193
           G  + +
Sbjct: 372 GIPEEI 377


>gi|319899244|ref|YP_004159337.1| GMP synthase [Bartonella clarridgeiae 73]
 gi|319403208|emb|CBI76767.1| GMP synthase [Bartonella clarridgeiae 73]
          Length = 518

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 52/185 (28%), Gaps = 18/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS       +   D++  +  D+G   K E      V K   +    
Sbjct: 221 KSRVICGLSGGVDSSVVAVLLHEAIGDQLICVFVDHGLMRKNE---AEEVLKLFRD---- 273

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   + + L  +   S         +  +        +              A  L
Sbjct: 274 -------HYNIKLVHVNAASIFINALEGEIDPEKKRKIIGRLFIEVFEEETKKIGGAEFL 326

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+  +         I++      L     + +  PL  L K +   L ++
Sbjct: 327 AQGTLYPDVIESVSAIGEAVT---IKSHHNVGGLPERMKMELIEPLRELFKDDVRSLGRE 383

Query: 187 IGGQD 191
           +G  +
Sbjct: 384 LGLPE 388


>gi|330930353|ref|XP_003302998.1| hypothetical protein PTT_15010 [Pyrenophora teres f. teres 0-1]
 gi|311321300|gb|EFQ88898.1| hypothetical protein PTT_15010 [Pyrenophora teres f. teres 0-1]
          Length = 541

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 57/185 (30%), Gaps = 17/185 (9%)

Query: 15  FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
            SGG DS+       +   DR   +  D G     E    + V+K + E           
Sbjct: 240 VSGGVDSTVAAKLMKEAIGDRFHAVMVDNGVLRLNE---AVQVKKTLDE------GLGIN 290

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
             ++  + L       +T +   K +        V  +    +   A          I  
Sbjct: 291 LTVIDASDLFLDRLKGVTDDPEKKRKIIGNTFIEVFQQQAEKIKAEA--HESANAGEIEW 348

Query: 134 GVCETDY-----SGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
            +  T Y     S        TI+       L  +  + V  PL  L K E  +L +++G
Sbjct: 349 LLQGTLYPDVIESLSFKGPSQTIKTHHNVGGLPKDMKLKVIEPLRELFKDEVRQLGKELG 408

Query: 189 GQDLV 193
             + +
Sbjct: 409 IPEDL 413


>gi|307710241|ref|ZP_07646684.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus mitis SK564]
 gi|307619003|gb|EFN98136.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus mitis SK564]
          Length = 373

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 50/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D  K     ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMW 174
             A  LG   +  G             H                 L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYARVARDEDGTVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  +LA++ G
Sbjct: 174 LEKPEVRRLAEEAG 187


>gi|189194249|ref|XP_001933463.1| GMP synthase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187979027|gb|EDU45653.1| GMP synthase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 541

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 57/185 (30%), Gaps = 17/185 (9%)

Query: 15  FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
            SGG DS+       +   DR   +  D G     E    + V+K + E           
Sbjct: 240 VSGGVDSTVAAKLMKEAIGDRFHAVMVDNGVLRLNE---AVQVKKTLDE------GLGIN 290

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
             ++  + L       +T +   K +        V  +    +   A          I  
Sbjct: 291 LTVIDASDLFLDRLKGVTDDPEKKRKIIGNTFIEVFQQQAEKIKAEA--HESANAGEIEW 348

Query: 134 GVCETDY-----SGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
            +  T Y     S        TI+       L  +  + V  PL  L K E  +L +++G
Sbjct: 349 LLQGTLYPDVIESLSFKGPSQTIKTHHNVGGLPKDMKLKVIEPLRELFKDEVRQLGKELG 408

Query: 189 GQDLV 193
             + +
Sbjct: 409 IPEDL 413


>gi|163783771|ref|ZP_02178756.1| hypothetical protein HG1285_09931 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880960|gb|EDP74479.1| hypothetical protein HG1285_09931 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 348

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
           A+ L SGG DSS  +    ++   V+ L F  G
Sbjct: 5  RAVALLSGGLDSSLAVRILQEQGVEVKALHFYTG 38


>gi|31542641|ref|NP_060476.2| mitochondrial tRNA-specific 2-thiouridylase 1 [Homo sapiens]
 gi|8134740|sp|O75648|MTU1_HUMAN RecName: Full=Mitochondrial tRNA-specific 2-thiouridylase 1;
           AltName: Full=MTO2 homolog
 gi|4469186|emb|CAB38414.1| tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase [Homo
           sapiens]
 gi|17149283|gb|AAL35970.1| 5-methylaminomethyl-2-thiouridylate-methyltransferase [Homo
           sapiens]
 gi|17432490|gb|AAL38183.1| 5-methylaminomethyl-2-thiouridylate-methyltransferase [Homo
           sapiens]
 gi|54633233|dbj|BAD66875.1| mitochondrial tRNA-specific 2-thiouridylase 1 [Homo sapiens]
 gi|119593828|gb|EAW73422.1| tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase, isoform
           CRA_a [Homo sapiens]
 gi|158254860|dbj|BAF83401.1| unnamed protein product [Homo sapiens]
          Length = 421

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/113 (11%), Positives = 29/113 (25%), Gaps = 9/113 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--------QRNKVELECRLCV 56
           ++     +   SGG DS+        R  +V  +                  + E    V
Sbjct: 1   MQALRHVVCALSGGVDSAVAALLLRRRGYQVTGVFMKNWDSLDEHGVCTADKDCEDAYRV 60

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
            + +     +    + E      +   +      T N  +    +   + F  
Sbjct: 61  CQILDIPFHQVS-YVKEYWNDVFSDFLNEYEKGRTPNPDIVCNKHIKFSCFFH 112


>gi|14591383|ref|NP_143461.1| hypothetical protein PH1608 [Pyrococcus horikoshii OT3]
 gi|3258037|dbj|BAA30720.1| 295aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 295

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 23/54 (42%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
               +L+FSGG+DSS  L    +    V  L+F +       L   +   KK+ 
Sbjct: 54  NKRIILMFSGGKDSSLALYLLKEAGYNVSALTFFHKWSWPEVLRWGMKFTKKLG 107


>gi|117927580|ref|YP_872131.1| GMP synthase [Acidothermus cellulolyticus 11B]
 gi|117648043|gb|ABK52145.1| GMP synthase (glutamine-hydrolyzing) [Acidothermus cellulolyticus
           11B]
          Length = 522

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 48/184 (26%), Gaps = 16/184 (8%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A+   SGG DS+   +       DR+  +  D+G     E      V +  V        
Sbjct: 225 AICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGE---AEQVEQDFVAAT----- 276

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                H++  A     + S +      +                     A       G  
Sbjct: 277 -GVRLHVVDAADRFLAALSGVVDPEEKRRIIGREFIRVFEAAAQDIAASAPVEFLVQGTL 335

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
              +       +          ++      L  +    +  PL  L K E   +  ++G 
Sbjct: 336 YPDVVESGGGANAATI------KSHHNVGGLPPDLRFRLVEPLRTLFKDEVRAVGAELGL 389

Query: 190 QDLV 193
            + +
Sbjct: 390 PESL 393


>gi|322378091|ref|ZP_08052577.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus sp. M334]
 gi|321280928|gb|EFX57942.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus sp. M334]
          Length = 391

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 52/194 (26%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D  K     ++  SGG DSS       ++   V  +             C     +  
Sbjct: 19  MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 74

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 75  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 131

Query: 121 TLAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 132 DYAMTLGADYVATGHYARVARDEDGTVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 191

Query: 175 LKKYETWKLAQDIG 188
           L+K E  +LA++ G
Sbjct: 192 LEKPEVRRLAEEAG 205


>gi|306828717|ref|ZP_07461909.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus mitis ATCC 6249]
 gi|304428895|gb|EFM31983.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus mitis ATCC 6249]
          Length = 373

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 52/194 (26%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D  K     ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYARVARDEDGIVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  +LA++ G
Sbjct: 174 LEKPEVRRLAEEAG 187


>gi|302348658|ref|YP_003816296.1| GMP synthase (glutamine-hydrolyzing) [Acidilobus saccharovorans
           345-15]
 gi|302329070|gb|ADL19265.1| GMP synthase (glutamine-hydrolyzing) [Acidilobus saccharovorans
           345-15]
          Length = 517

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 58/190 (30%), Gaps = 20/190 (10%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           I +   A++  SGG DS+T    A     DR   +  ++G   + E E  L   K +   
Sbjct: 219 IPREDKAIVAVSGGVDSTTAAVIAKRALGDRAVVVFINHGLLREGEAEEVLSALKSLGLN 278

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                               D    +L      + +   +   F      +    ++   
Sbjct: 279 PIYI-------------DASDRFLRALKGVTDPEQKRLVVGKVFAEVFKEVATSDSSIR- 324

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
                  +             +   D I++      L  +  + V  PL +L K E  +L
Sbjct: 325 -----WLVQGTTYPDVIESGAEAGADRIKSHHNVGGLPRDLGLRVIEPLRYLYKDEVRRL 379

Query: 184 AQDIGGQDLV 193
           A  +G  + +
Sbjct: 380 ALSLGIPESI 389


>gi|116250590|ref|YP_766428.1| lipopolysaccharide synthesis protein [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115255238|emb|CAK06313.1| putative lipopolysaccharide synthesis protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 386

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/178 (12%), Positives = 47/178 (26%), Gaps = 9/178 (5%)

Query: 11  ALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A++  SGG DS+      A     R+  +  D G  ++  +     + +K+   +  +  
Sbjct: 70  AMVGLSGGIDSAFLAHLAARKHGLRLLAVHVDGGWNSEPAVHNIEILVRKLDLDLHTYVI 129

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI---IFLVFAATLAYRL 126
              E   L +A +     +                      R+    +     + +    
Sbjct: 130 EWQEMRDLQIAFMKASVLNQDIPQDHAFFSTLYRTAAKFGIRHFLSGVNFASESVIPRGF 189

Query: 127 GITNIV--IGVCETDYSGYPDCRHDTIRAIETAINLG---MESHVTVHTPLMWLKKYE 179
           G  +I            G          +    I L     +  +      +   K E
Sbjct: 190 GYPSIDGTHASAIQKRFGSLKLTTYPFMSPLEYIWLTRVRRQLTIHRPLNYIDYNKEE 247


>gi|15924611|ref|NP_372145.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|156979939|ref|YP_001442198.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
           aureus Mu3]
 gi|255006407|ref|ZP_05145008.2| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|24638325|sp|Q931Q6|MNMA_STAAM RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|166235085|sp|A7X333|MNMA_STAA1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|14247392|dbj|BAB57783.1| tRNA-methyltransferase [Staphylococcus aureus subsp. aureus Mu50]
 gi|156722074|dbj|BAF78491.1| 5-methylaminomethyl-2-thiouridylate- methyltransf erase
           [Staphylococcus aureus subsp. aureus Mu3]
          Length = 372

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 49/191 (25%), Gaps = 11/191 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  K    ++  SGG DSS       ++   V  +             C     +   ++
Sbjct: 1   MSNKDIRVVVGMSGGVDSSVTAHVLKEQGYDVIGIFMKNWDDTDENGVC--TATEDYNDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +          + +            +      + +    PN  V     I        A
Sbjct: 59  IEVCNQIGIPYYAVN---FEKEYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLDHA 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLKK 177
             LG   +  G     +                         L  +    V  P+  ++K
Sbjct: 116 MNLGADYVATGHYARIHRHEDGHVEMLRGVDNNKDQTYFLNQLSQQQLSKVMFPIGDIEK 175

Query: 178 YETWKLAQDIG 188
            E  ++A++ G
Sbjct: 176 SEVRRIAEEQG 186


>gi|299783033|gb|ADJ41031.1| tRNA methyl transferase [Lactobacillus fermentum CECT 5716]
          Length = 377

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 47/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS        +   V  +             C     +  
Sbjct: 1   MTD--NSHTRVVVGMSGGVDSSVTALLLKQQGYDVVGVFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            +      + +    PN  V     I      
Sbjct: 57  KDVAKVATQIGIPYYSVN---FEKEYWDRVFTYFIDEFKKGRTPNPDVICNKEIKFKAFI 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A +LG   +  G             H      +T         L       V  PL  
Sbjct: 114 EYANQLGADYVATGHYADLKRDEAGNMHLMRAKDQTKDQTYFLSQLDHAQLDKVLFPLAG 173

Query: 175 LKKYETWKLAQDIG 188
             K E  +LA+D G
Sbjct: 174 YTKKEVRQLAKDAG 187


>gi|309799040|ref|ZP_07693293.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus infantis SK1302]
 gi|308117275|gb|EFO54698.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus infantis SK1302]
          Length = 373

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 53/194 (27%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D  K     ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNI----VIGVCETDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +       V   +       R       +T     L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYARVARDEAGIVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  +LA++ G
Sbjct: 174 LEKPEVRRLAEEAG 187


>gi|256830263|ref|YP_003158991.1| GMP synthase, large subunit [Desulfomicrobium baculatum DSM 4028]
 gi|256579439|gb|ACU90575.1| GMP synthase, large subunit [Desulfomicrobium baculatum DSM 4028]
          Length = 515

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 50/186 (26%), Gaps = 18/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DS+             +  +  D G     E +              + 
Sbjct: 219 DKVVCGLSGGIDSTVVAVLLNKAIGKNLHCIFVDNGLLRAGEGD--------------EV 264

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              L +   L L  +          +    ++D       +    I      A     + 
Sbjct: 265 IGYLRQHFDLNLHYIKAQ---DKFLSRLEGLEDPEQKRKIIGYTFIEVFEEEAKKIPGVK 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    +   S         I++      L  +  + +  PL  L K E  K+AQ++
Sbjct: 322 YLAQGTLYPDVIESISFKGPSAVIKSHHNVGGLPEKMDLALVEPLRELFKDEVRKVAQEL 381

Query: 188 GGQDLV 193
           G  D +
Sbjct: 382 GLPDFI 387


>gi|229815927|ref|ZP_04446250.1| hypothetical protein COLINT_02983 [Collinsella intestinalis DSM
           13280]
 gi|229808480|gb|EEP44259.1| hypothetical protein COLINT_02983 [Collinsella intestinalis DSM
           13280]
          Length = 563

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 49/185 (26%), Gaps = 12/185 (6%)

Query: 8   APSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +  A     ++  +  ++G   K E E    V  K       
Sbjct: 249 EDRVILALSGGVDSSVVAALGARAVGRQMTCVFINHGLLRKGEPEQVEEVFTK------- 301

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                  D +   A     +      +   K +                L         L
Sbjct: 302 ---QFDVDFVHVHAEERYAALLDGVTDPEEKRRIIGTQFWNEFFAVAKELEQDGRPVKYL 358

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                +        +     +  TI++    I      H  +  PL    K E  +L   
Sbjct: 359 -AQGTIYPDIIESGARKTGGKTATIKSHHNLIPFPEGVHFDLIEPLDHFFKDEVRELGLA 417

Query: 187 IGGQD 191
           +G  +
Sbjct: 418 LGLPE 422


>gi|330900616|gb|EGH32035.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 366

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 48/185 (25%), Gaps = 10/185 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS      +++  +VE L     + +     C    R+ + +      
Sbjct: 2   KRVIVGMSGGVDSSVSAVLLIEQGYQVEGLFMKNWEEDDGTEYC--TAREDLADAQAVCD 59

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + H        +   +     +             +  R  I        A  LG 
Sbjct: 60  KIGIKLHT--ANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFKAFLDYALMLGA 116

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             I  G                              +G E       P+  L+K E   +
Sbjct: 117 DLIATGHYVRRRDIDGRTELLKGLDPNKDQSYFLHAVGGEQIARTLFPVGELEKPEVRAI 176

Query: 184 AQDIG 188
           A+  G
Sbjct: 177 AEKHG 181


>gi|323442826|gb|EGB00451.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus O46]
          Length = 372

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 52/191 (27%), Gaps = 11/191 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  K    ++  SGG DSS       ++   V  +             C     +   ++
Sbjct: 1   MSNKDIRVVVGMSGGVDSSVTAHVLKEQGYDVIGIFMKNWDDTDENGVC--TATEDYNDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +          + +            +      + +    PN  V     I        A
Sbjct: 59  IEVCNQIGIPYYAVN---FEKEYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLDHA 115

Query: 124 YRLGITNIVIGVCETDYSGYP----DCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKK 177
             LG   +  G     +          R       +T     L  +    V  P+  ++K
Sbjct: 116 MNLGADYVATGHYARIHRHEDGNVEMLRGVDNNKDQTYFLNQLSQQQLSKVMFPIGDIEK 175

Query: 178 YETWKLAQDIG 188
            E  ++A++ G
Sbjct: 176 SEVRRIAEEQG 186


>gi|53715285|ref|YP_101277.1| tRNA-specific 2-thiouridylase MnmA [Bacteroides fragilis YCH46]
 gi|81608253|sp|Q64P39|MNMA3_BACFR RecName: Full=tRNA-specific 2-thiouridylase mnmA 3
 gi|52218150|dbj|BAD50743.1| putative tRNA (5-methylaminomethyl-2-thiouridylate)
           methyltransferase [Bacteroides fragilis YCH46]
          Length = 362

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/197 (11%), Positives = 49/197 (24%), Gaps = 22/197 (11%)

Query: 5   IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +K++   +L+  SGG DS+       ++   +  ++         E +    +  ++   
Sbjct: 1   MKESKKRVLVGMSGGIDSTATCLMLQEQGYEIVGVTMRVWGD---EPQDARELAARMGIE 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                + +     +    +              + +    PN  V    +         A
Sbjct: 58  HYVADERVPFKDTIVKNFI-------------DEYRQGRTPNPCVMCNPLFKFRMLIEWA 104

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            +LG   I  G                   D          LG +       PL    K 
Sbjct: 105 DKLGCDWIATGHYSRLEERNGHIYIVAGDDDKKDQSYFLWRLGQDVLRRCIFPLGNYTKQ 164

Query: 179 ETWKLAQDIGGQDLVNL 195
                  + G +     
Sbjct: 165 TVRDYLHEKGYEAKSKE 181


>gi|319789732|ref|YP_004151365.1| NAD+ synthetase [Thermovibrio ammonificans HB-1]
 gi|317114234|gb|ADU96724.1| NAD+ synthetase [Thermovibrio ammonificans HB-1]
          Length = 278

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/201 (12%), Positives = 58/201 (28%), Gaps = 20/201 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            A++  SGG DSS     A+     + V  +S  Y   +    E    V + +       
Sbjct: 36  KAVVGLSGGVDSSLAAFLAVKALGNNNVIGISMPYRTSSPSSREDAKLVAQVLG------ 89

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                E H + +    D  +S   +   ++  +           +      A  +     
Sbjct: 90  ----IEFHEIDITPQIDAYYSRFQEADPVRKGNKMARERMSILYDFAHWKGALVIGTSNK 145

Query: 128 ITNIVIG---VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL-----KKYE 179
              ++       ++ +   P       +  + A   G+   +    P   L      + E
Sbjct: 146 SELLIGYSTRWGDSAHDVNPLGDLYKTQVWQLAEFTGVPERIVKKKPSADLWPGQTDEGE 205

Query: 180 TWKLAQDIGGQDLVNLILEES 200
                +++    +  + L  S
Sbjct: 206 IGLTYRELDQILIGYVDLRLS 226


>gi|270291927|ref|ZP_06198142.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus sp. M143]
 gi|270279455|gb|EFA25297.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus sp. M143]
          Length = 383

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 50/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D  K     ++  SGG DSS       ++   V  +             C     +  
Sbjct: 11  MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 66

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 67  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 123

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMW 174
             A  LG   +  G             H                 L  E       PL  
Sbjct: 124 DYAMTLGADYVATGHYARVARDEDGIVHMLRGVDTGKDQTYFLSQLSQEQLQKTMFPLGH 183

Query: 175 LKKYETWKLAQDIG 188
           L+K E  KLA++ G
Sbjct: 184 LEKPEVRKLAEEAG 197


>gi|261208073|ref|ZP_05922748.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium TC 6]
 gi|289565497|ref|ZP_06445945.1| tRNA methyl transferase [Enterococcus faecium D344SRF]
 gi|294615054|ref|ZP_06694941.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium E1636]
 gi|294617680|ref|ZP_06697306.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium E1679]
 gi|314938375|ref|ZP_07845666.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium TX0133a04]
 gi|314942298|ref|ZP_07849146.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium TX0133C]
 gi|314951434|ref|ZP_07854484.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium TX0133A]
 gi|314993154|ref|ZP_07858539.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium TX0133B]
 gi|314996038|ref|ZP_07861116.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium TX0133a01]
 gi|260077657|gb|EEW65373.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium TC 6]
 gi|289162695|gb|EFD10547.1| tRNA methyl transferase [Enterococcus faecium D344SRF]
 gi|291592089|gb|EFF23711.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium E1636]
 gi|291596054|gb|EFF27321.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium E1679]
 gi|313589792|gb|EFR68637.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium TX0133a01]
 gi|313592331|gb|EFR71176.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium TX0133B]
 gi|313596391|gb|EFR75236.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium TX0133A]
 gi|313598915|gb|EFR77760.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium TX0133C]
 gi|313642273|gb|EFS06853.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium TX0133a04]
          Length = 373

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 48/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MTD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAKVAAQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYAMDLGADYVATGHYAQVTRDENGVVHMLRGVDNNKDQTYFLSQLSQEQLSKTMFPLGG 173

Query: 175 LKKYETWKLAQDIG 188
           ++K E   +A+  G
Sbjct: 174 MEKSEVRAIAERAG 187


>gi|269792364|ref|YP_003317268.1| argininosuccinate synthase [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269099999|gb|ACZ18986.1| argininosuccinate synthase [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 410

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 61/216 (28%), Gaps = 29/216 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI-VEL 63
           +      +L +SGG D+S  + W  ++   V T + D GQ   +E      ++       
Sbjct: 1   MTYKGKLVLAYSGGLDTSVAIPWLKEQGYEVITFTADVGQPIDLEGTKAKAIKSGASKAY 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +   ++   E+ +        +   +   N A+                 +       +A
Sbjct: 61  IADLREEFVEEFVWRSLKANAMYQGTYPLNSALSRP--------------LIASHLVKVA 106

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              G   I  G              D +R    A  L  +  V          + E  + 
Sbjct: 107 EEEGAVAIAHGCTGK--------GQDQVRIEVCAKALNPDIVVEAPVRDWHFSRDEEIEY 158

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCN 219
           A+  G      + +  + +      +  +     C 
Sbjct: 159 AEKHG------IPIPVTKSSPYSIDENLWGRSIECG 188


>gi|225619893|ref|YP_002721150.1| thiamine biosynthesis protein [Brachyspira hyodysenteriae WA1]
 gi|225214712|gb|ACN83446.1| thiamine biosynthesis protein [Brachyspira hyodysenteriae WA1]
          Length = 356

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 28/101 (27%), Gaps = 5/101 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-----QRNKVELECRLCVRK 58
           +  K   A+LL SGG DS    +        V  L F  G      + ++         K
Sbjct: 1   MSDKKAKAILLLSGGLDSMLVGAILKRENIDVLALRFVTGLEYAVIKEELLEIYSEDPAK 60

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ 99
           K  + +      +    +     L          N  +   
Sbjct: 61  KAADFLNIPIRFVSLKDVYLDMFLNPKYGYGSAINPCLDCH 101


>gi|150402761|ref|YP_001330055.1| ExsB family protein [Methanococcus maripaludis C7]
 gi|150033791|gb|ABR65904.1| ExsB family protein [Methanococcus maripaludis C7]
          Length = 261

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/186 (11%), Positives = 55/186 (29%), Gaps = 1/186 (0%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   A++ FSGG DS+T +  A ++   +  ++         E E  +     ++++  +
Sbjct: 62  EKEKAVVAFSGGVDSTTSIIIA-NQIFEICAVTVRSKYIMDAETEKNVSKLASVLDVSHE 120

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           + D   +                    V  +I +    N          L        +L
Sbjct: 121 FIDVNLDSIFEDTKSGKYHPCGRCHSTVESEILNYAEKNDISYIIYGDMLSIGYLSIKKL 180

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I + +         + R                  +        ++K+   ++ ++
Sbjct: 181 DNKIIRLNILSFLSLAKDESRTILKEFNININQSYGCQLIKKAHKHKSMQKFTIQRILRE 240

Query: 187 IGGQDL 192
           +  Q +
Sbjct: 241 VRAQVI 246


>gi|57242393|ref|ZP_00370331.1| GMP synthase [Campylobacter upsaliensis RM3195]
 gi|57016678|gb|EAL53461.1| GMP synthase [Campylobacter upsaliensis RM3195]
          Length = 517

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 46/186 (24%), Gaps = 15/186 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           + +  +  D G   K E E    + K+        
Sbjct: 218 DKVLCAVSGGVDSSVVAILLYRAIGENLIPVFVDTGLLRKGEREAVEAMFKE-------- 269

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +      +     L       +T+    +                             G
Sbjct: 270 -NLKVPLIVADARELFLRRLKGVTEPEQKRKIIGETFIEVFEAEAKKHNTKGEIKFLAQG 328

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    +   S        TI++      L       +  PL  L K E   L +++
Sbjct: 329 -----TLYPDVIESVSVKGPSKTIKSHHNVGGLPEWMKFELIEPLRELFKDEVRALGREL 383

Query: 188 GGQDLV 193
           G  + +
Sbjct: 384 GMPESM 389


>gi|69244797|ref|ZP_00603021.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium DO]
 gi|257879151|ref|ZP_05658804.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium 1,230,933]
 gi|257882042|ref|ZP_05661695.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium 1,231,502]
 gi|257883775|ref|ZP_05663428.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium 1,231,501]
 gi|257889981|ref|ZP_05669634.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium 1,231,410]
 gi|258615538|ref|ZP_05713308.1| tRNA-specific 2-thiouridylase MnmA [Enterococcus faecium DO]
 gi|260560202|ref|ZP_05832379.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium C68]
 gi|293553765|ref|ZP_06674382.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium E1039]
 gi|293563497|ref|ZP_06677945.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium E1162]
 gi|293569057|ref|ZP_06680369.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium E1071]
 gi|293571269|ref|ZP_06682303.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium E980]
 gi|294622809|ref|ZP_06701763.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium U0317]
 gi|314947767|ref|ZP_07851174.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium TX0082]
 gi|68196151|gb|EAN10581.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium DO]
 gi|257813379|gb|EEV42137.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium 1,230,933]
 gi|257817700|gb|EEV45028.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium 1,231,502]
 gi|257819613|gb|EEV46761.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium 1,231,501]
 gi|257826341|gb|EEV52967.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium 1,231,410]
 gi|260073769|gb|EEW62094.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium C68]
 gi|291588238|gb|EFF20074.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium E1071]
 gi|291597767|gb|EFF28905.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium U0317]
 gi|291602058|gb|EFF32293.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium E1039]
 gi|291604499|gb|EFF33985.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium E1162]
 gi|291608676|gb|EFF37964.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium E980]
 gi|313645747|gb|EFS10327.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium TX0082]
          Length = 373

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 48/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MTD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAKVAAQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYAMDLGADYVATGHYAQVTRDENGVVHMLRGVDNNKDQTYFLSQLSQEQLSKTMFPLGG 173

Query: 175 LKKYETWKLAQDIG 188
           ++K E   +A+  G
Sbjct: 174 MEKSEVRAIAERAG 187


>gi|313157065|gb|EFR56495.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Alistipes sp. HGB5]
          Length = 438

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 45/188 (23%), Gaps = 13/188 (6%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE----------CRLCVRKKI 60
            ++  SGG DSS        +   V  L           LE              V K++
Sbjct: 4   VVIGLSGGVDSSVAAYLLKRQGHDVTGLFMINWHDTTGTLEGDCPWHDDRVFAELVAKRL 63

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
              +     S      + +  +        T N  +        + F+     +   F A
Sbjct: 64  DIPLRVVDLSADYRTRV-VDYMFAEYEKGRTPNPDVLCNREIKFDVFLREALKLGADFVA 122

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           T  Y      +                            L  E       P+  L K E 
Sbjct: 123 TGHYCRKAEEV--LPDGRTVFKLLAGADPNKDQSYFLCQLSQEQLRYALFPIGDLLKPEV 180

Query: 181 WKLAQDIG 188
            ++A   G
Sbjct: 181 RRIAAKQG 188


>gi|296109387|ref|YP_003616336.1| Thiamine biosynthesis protein-like protein [Methanocaldococcus
           infernus ME]
 gi|295434201|gb|ADG13372.1| Thiamine biosynthesis protein-like protein [Methanocaldococcus
           infernus ME]
          Length = 241

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 56/180 (31%), Gaps = 5/180 (2%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K    +L FSGG DS   L+  L R  +V+ +       +K + E    + KK    +  
Sbjct: 18  KGKKVILAFSGGVDSLI-LAILLSRVAKVKCVFIKTPYIHKYKEEDAKALAKKFNLDLEI 76

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               L  D I+  + L       +  ++  K+++    +  V G +   L         L
Sbjct: 77  ----LYVDKIVENSKLRCYHCKKMFFSILNKMKEELSYDLVVDGTHYDDLFEDRPGLKAL 132

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
              NI     E         +      I       + +          L+K E  +    
Sbjct: 133 EELNISSPFAEFKVRKGDILKLAKDLNINIPKETCLLTRFDRDVDEKELRKVEALEEFLR 192


>gi|262306047|gb|ACY45616.1| gln amidotransferase [Eurypauropus spinosus]
          Length = 197

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 36/121 (29%), Gaps = 7/121 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               L+L SGG DS+ C++        + V  L  D G   K E +      +KI   + 
Sbjct: 43  RNKVLMLVSGGVDSTVCVALLHKALGAENVIALHIDNGFMRKNESQQVEXSLRKIGLQIK 102

Query: 66  KWK-----DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                    +   D  +  +    +   S         ++          R    ++   
Sbjct: 103 VVNAWHSFYNGTTDIPVDRSNPNSVKVQSGLLCQITNPEEKRKIIGDTFIRVANEIISEL 162

Query: 121 T 121
           +
Sbjct: 163 S 163


>gi|224371642|ref|YP_002605806.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Desulfobacterium autotrophicum HRM2]
 gi|223694359|gb|ACN17642.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Desulfobacterium autotrophicum HRM2]
          Length = 365

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 39/135 (28%), Gaps = 16/135 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +P+A+ + SGG DS         +   +  + F  G  ++             V+L   
Sbjct: 27  NSPTAIAM-SGGIDSLVAAHVLKRQGHDLVGIHFTTGFESEA------------VDLSSI 73

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H +    L    + ++             PN  V     I     A  A  L
Sbjct: 74  EDQLDIKIHQMD---LSAEFNRAVVDYFVKTYARGKTPNPCVVCNRTIKFGVLAQRAKTL 130

Query: 127 GITNIVIGVCETDYS 141
           G   I  G      +
Sbjct: 131 GAEKIATGHYAGTRT 145


>gi|116516757|ref|YP_815643.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae D39]
 gi|30173410|sp|Q8CWW0|MNMA_STRR6 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|122279467|sp|Q04MV1|MNMA_STRP2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|116077333|gb|ABJ55053.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae D39]
          Length = 373

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 50/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            + +    + +    PN  V     I      
Sbjct: 57  KDVVAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMW 174
             A  LG   +  G             H                 L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYARVARDEDGTVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           LKK E  KLA++ G
Sbjct: 174 LKKPEVRKLAEEAG 187


>gi|332674135|gb|AEE70952.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Helicobacter pylori 83]
          Length = 353

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 52/184 (28%), Gaps = 17/184 (9%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           N+ +K      +L SGG DSS       ++   +  +         ++L          +
Sbjct: 7   NERLKM--KIAVLLSGGVDSSYSAYSLKEQGHELVGIY--------LKLHASEKKHDLYI 56

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +   K  + LG    L +        S++        ++   PN       ++    A  
Sbjct: 57  KNAQKACEFLGIP--LEVLDFQKDFKSAVYDEFISAYEEGQTPNPCALCNPLMKFGLALD 114

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWLK 176
            A +LG   I  G                    T         L  E    +  PL  L 
Sbjct: 115 HALKLGCEKIATGHYARVKEIDKVSYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLL 174

Query: 177 KYET 180
           K + 
Sbjct: 175 KKDI 178


>gi|327401838|ref|YP_004342677.1| GMP synthase subunit B [Archaeoglobus veneficus SNP6]
 gi|327317346|gb|AEA47962.1| GMP synthase (glutamine-hydrolyzing) subunit B [Archaeoglobus
          veneficus SNP6]
          Length = 303

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
          K   A++  SGG DSS C   A     DR+  +  D G   + E E    +   +  +  
Sbjct: 19 KDGKAIIALSGGVDSSVCTVLAYKAIGDRLIPVFVDTGLMREGEPERVKEIFGHMNLVFV 78

Query: 66 KWKDSLGE 73
            KD   E
Sbjct: 79 DAKDEFFE 86


>gi|312795152|ref|YP_004028074.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia rhizoxinica HKI 454]
 gi|312166927|emb|CBW73930.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC
           2.1.1.61) [Burkholderia rhizoxinica HKI 454]
          Length = 380

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 41/194 (21%), Gaps = 10/194 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS        +   V  L     + +     C         + +   
Sbjct: 3   KQRVVIGMSGGVDSSVAAWLLKQQGYEVVGLFMKNWEDDDDSEYCSSRQ-----DWIDVV 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +      +            +      +      PN  V     I        A  LG
Sbjct: 58  SVADLIGIDVEAVNFAAQYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMALG 117

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G                    +         L          PL  L K    +
Sbjct: 118 AQTIATGHYARVRRIGERFELLKALDSSKDQSYFLHRLNQSQLSRTLFPLGELPKTRVRE 177

Query: 183 LAQDIGGQDLVNLI 196
           +A  IG  +     
Sbjct: 178 IAAQIGLPNAAKKD 191


>gi|301381398|ref|ZP_07229816.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas syringae pv. tomato
           Max13]
 gi|302058396|ref|ZP_07249937.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas syringae pv. tomato
           K40]
 gi|302130355|ref|ZP_07256345.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas syringae pv. tomato
           NCPPB 1108]
          Length = 366

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 35/135 (25%), Gaps = 5/135 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS      +++  +VE L     + +     C    R+ + +      
Sbjct: 2   KRVIVGMSGGVDSSVSAVLLMEQGYQVEGLFMKNWEEDDGTEYC--TAREDLADAQAVCD 59

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + H        +   +     +             +  R  I        A  LG 
Sbjct: 60  RIGIKLHT--ANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFKAFLDYALMLGA 116

Query: 129 TNIVIGVCETDYSGY 143
             I  G         
Sbjct: 117 DLIATGHYVRRRDID 131


>gi|254492565|ref|ZP_05105737.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylophaga thiooxidans DMS010]
 gi|224462457|gb|EEF78734.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methylophaga thiooxydans DMS010]
          Length = 367

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 56/193 (29%), Gaps = 19/193 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--------RLCV 56
           + +    ++  SGG DSS        + ++VE L          E EC         + V
Sbjct: 1   MAENKKVVVGLSGGVDSSVAALLLNQQHEQVEGLFMKNWVDFADESECTVEEDRKDAMSV 60

Query: 57  RKKIVELMPKWK-----DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
            + +     +             H L     G   +  +  N  +K +          G 
Sbjct: 61  AETVGIDFHEANFAMEYWDYVFKHFLDEYRAGRTPNPDILCNREIKFKAFLDHA-MELGG 119

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
            +I     A +A R G  +++ G+ +     Y        +   T   LG      V   
Sbjct: 120 VLIATGHYARVAERDGKFHLLKGLDDKKDQSYFLYTLGQQQLSRTLFPLGELPKTEVRQI 179

Query: 172 -----LMWLKKYE 179
                 +   K +
Sbjct: 180 AEQAGFINHDKKD 192


>gi|158319585|ref|YP_001512092.1| GMP synthase, large subunit [Alkaliphilus oremlandii OhILAs]
 gi|158139784|gb|ABW18096.1| GMP synthase, large subunit [Alkaliphilus oremlandii OhILAs]
          Length = 319

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 46/187 (24%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              A+   SGG DS+           D++  +  D+G   K E +    + K        
Sbjct: 24  NKKAICALSGGVDSTVSAVLVHKAIGDQLTCIFVDHGLMRKNEGDWVEDLFK-------- 75

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     +    +                +           R              L
Sbjct: 76  ------NQFKMNFIRVNAKERFFGQLAGVEDPEQKRKIIGEQFIRVFEEESKKLGQFDFL 129

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+   G        +++      L  +    +  PL  L K E     ++
Sbjct: 130 VQGTIYSDVIESGKDGN-----ANVKSHHNVGGLPEDVDFQLLEPLRSLYKDEVRMTGEE 184

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 185 LGLAHEL 191


>gi|209529646|ref|NP_001129348.1| mitochondrial tRNA-specific 2-thiouridylase 1 [Rattus norvegicus]
 gi|149065691|gb|EDM15564.1| tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
           (predicted), isoform CRA_a [Rattus norvegicus]
          Length = 417

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/113 (11%), Positives = 28/113 (24%), Gaps = 9/113 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--------QRNKVELECRLCV 56
           +      +   SGG DS+        R  +V  +                  + E    V
Sbjct: 1   MSALRHVVCALSGGVDSAVAALLLRRRGYQVTGVFMKNWDSLDEQGICAADKDCEDAYKV 60

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
            + +     +    + E      +   +      T N  +    +   + F  
Sbjct: 61  CQILDIPFHQVS-YVKEYWNDVFSDFLNEYEKGRTPNPDISCNKHIKFSCFHH 112


>gi|331084260|ref|ZP_08333365.1| GMP synthase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|330401795|gb|EGG81372.1| GMP synthase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 514

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 51/190 (26%), Gaps = 22/190 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS           +++  +  D+G            +RK   + +  
Sbjct: 215 NGKVLCALSGGVDSSVAAVMLSKAVGNQLTCVFVDHG-----------LLRKDEGDEVEA 263

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G+  +  + +       +  K V    +               F+      A ++
Sbjct: 264 VFGPNGQYDLNFIRVNAQERFYAKLKGVEEPEEK-------RKIIGEEFIRVFEEEAKKI 316

Query: 127 GITNIV---IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           G  + +       +   SG                         +  PL  L K E  K 
Sbjct: 317 GAVDFLVQGTIYPDVVESGVGGESTVIKSHHNVGGLPDYVDFKEIIEPLRDLFKDEVRKA 376

Query: 184 AQDIGGQDLV 193
             ++G  + +
Sbjct: 377 GLELGIPEYL 386


>gi|326430758|gb|EGD76328.1| GMP synthase [Salpingoeca sp. ATCC 50818]
          Length = 662

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 53/191 (27%), Gaps = 7/191 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
             S L++ SGG DS+ C +         RV  L  D G     E +      +++   + 
Sbjct: 212 KKSVLVMVSGGVDSAVCAALLNKALGPQRVIALHIDNGFMRLDESKQVKVSLERLGLPLH 271

Query: 66  KW--KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN---NLPNTFVPGRNIIFLVFAA 120
                +                  ++  K V    +           V  R +  L   +
Sbjct: 272 VIDASEDFYNGTTTITRKDKSEYETAPLKEVTAPEEKRKIIGDTFIKVAERAMQQLGIKS 331

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
              Y    T     +                   +TA+   +     V  PL    K E 
Sbjct: 332 DDVYLAQGTLRPDLIESASALASSSADAIKTHHNDTALVRKLREQGKVVEPLKDYHKDEV 391

Query: 181 WKLAQDIGGQD 191
            +L  ++G  +
Sbjct: 392 RQLGLELGLAE 402


>gi|262066104|ref|ZP_06025716.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium periodonticum ATCC 33693]
 gi|291380199|gb|EFE87717.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium periodonticum ATCC 33693]
          Length = 362

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 55/195 (28%), Gaps = 17/195 (8%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D  KK     +  SGG DSST       +   +  ++       K E      V   +  
Sbjct: 18  DSNKKGIKVGVAMSGGVDSSTVAYLLKQQGYDIFGVTMKTF---KDEDSDAKKVCDDLG- 73

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     E ++L +    +     +   V   +         V  R  I        
Sbjct: 74  ---------IEHYVLDVRD--EFKEKVMDYFVNEYMNGRTPNPCMVCNR-HIKFGKMLDF 121

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHD-TIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
               G + +  G      +G      D     +     +  +    +  P+  L+K +  
Sbjct: 122 ILSKGASFMATGHYTKLKNGLLSVGDDSNKDQVYFLSQIQKDRLSKIIFPVGDLEKPKLR 181

Query: 182 KLAQDIGGQDLVNLI 196
           +LA+ IG +      
Sbjct: 182 ELAKQIGVRVYSKKD 196


>gi|238855258|ref|ZP_04645577.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus jensenii 269-3]
 gi|260664617|ref|ZP_05865469.1| tRNA methyl transferase [Lactobacillus jensenii SJ-7A-US]
 gi|282932449|ref|ZP_06337874.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus jensenii 208-1]
 gi|313471923|ref|ZP_07812415.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus jensenii 1153]
 gi|238832150|gb|EEQ24468.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus jensenii 269-3]
 gi|239529151|gb|EEQ68152.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus jensenii 1153]
 gi|260561682|gb|EEX27654.1| tRNA methyl transferase [Lactobacillus jensenii SJ-7A-US]
 gi|281303398|gb|EFA95575.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus jensenii 208-1]
          Length = 375

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 47/192 (24%), Gaps = 12/192 (6%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           ++  +    ++  SGG DSS       +    V  +             C     +   +
Sbjct: 1   MVDNSKIRVVVGMSGGVDSSVSALLLKEAGYDVVGVFMKNWDDTDDAGVC--TATEDYED 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +           + +            + +    + +    PN  +     I        
Sbjct: 59  VKRVADKIGIPYYSIN---FEKEYWQRVFEYFLSEYKKGRTPNPDIMCNTEIKFKSFLEF 115

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTI------RAIETAINLGMESHVTVHTPLMWLK 176
           A  L    I +G             H                 L  E    V  PL  L 
Sbjct: 116 AMSLDADYIAMGHYAKTVKDANGVTHMMRPKDGNKDQTYFLSQLSQEQIKHVIFPLANLT 175

Query: 177 KYETWKLAQDIG 188
           K +  ++A+  G
Sbjct: 176 KPQVREIAEKAG 187


>gi|260589941|ref|ZP_05855854.1| GMP synthase [Blautia hansenii DSM 20583]
 gi|260539748|gb|EEX20317.1| GMP synthase [Blautia hansenii DSM 20583]
          Length = 520

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 51/190 (26%), Gaps = 22/190 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS           +++  +  D+G            +RK   + +  
Sbjct: 221 NGKVLCALSGGVDSSVAAVMLSKAVGNQLTCVFVDHG-----------LLRKDEGDEVEA 269

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G+  +  + +       +  K V    +               F+      A ++
Sbjct: 270 VFGPNGQYDLNFIRVNAQERFYAKLKGVEEPEEK-------RKIIGEEFIRVFEEEAKKI 322

Query: 127 GITNIV---IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           G  + +       +   SG                         +  PL  L K E  K 
Sbjct: 323 GAVDFLVQGTIYPDVVESGVGGESTVIKSHHNVGGLPDYVDFKEIIEPLRDLFKDEVRKA 382

Query: 184 AQDIGGQDLV 193
             ++G  + +
Sbjct: 383 GLELGIPEYL 392


>gi|225024394|ref|ZP_03713586.1| hypothetical protein EIKCOROL_01269 [Eikenella corrodens ATCC
           23834]
 gi|224942775|gb|EEG23984.1| hypothetical protein EIKCOROL_01269 [Eikenella corrodens ATCC
           23834]
          Length = 368

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 46/191 (24%), Gaps = 10/191 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +    + ++  SGG DSS        +  +V  +     + +  +  C +       +  
Sbjct: 1   MPTPQNIIVGLSGGVDSSVTAHLLKQQGHQVRGVFMQNWEDDDNDEYCSIKQ-----DSF 55

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                +      + +          +      + Q    PN  V     I        A 
Sbjct: 56  DAIAVADIIGIDIDIVNFAAQYKDKVFAYFLQEYQAGRTPNPDVLCNAEIKFKCFLDYAV 115

Query: 125 RLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
             G   I  G                              L          PL  L+K E
Sbjct: 116 EQGAEAIATGHYARKEVHSGKHYLLKGLDANKDQSYFLYRLQPHQLERALFPLGHLEKPE 175

Query: 180 TWKLAQDIGGQ 190
             ++A + G  
Sbjct: 176 VRRIAAEAGLP 186


>gi|206896303|ref|YP_002246574.1| hypothetical protein COPRO5265_0204 [Coprothermobacter
          proteolyticus DSM 5265]
 gi|206738920|gb|ACI17998.1| conserved protein [Coprothermobacter proteolyticus DSM 5265]
          Length = 341

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 3/74 (4%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A+ L SGG DS       LD+   V  +SF+         +      K++   +  W  
Sbjct: 12 RAIALLSGGLDSMLAAKLILDQGIEVIGISFE---SPFFNADRARTAAKQLAIPLITWDI 68

Query: 70 SLGEDHILPLAILG 83
          +     +L     G
Sbjct: 69 TDELIKVLKNPKHG 82


>gi|313637741|gb|EFS03100.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria seeligeri FSL S4-171]
          Length = 371

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/185 (11%), Positives = 47/185 (25%), Gaps = 12/185 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS       ++   V  +   ++   ++  +         ++ +  +  
Sbjct: 9   RVVVGMSGGVDSSVTAHLLKEQGYDVIGIFMKNWDDTDEFGVCTATEDYDDVIRVANQIG 68

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                     +    +      T  +             +     I        A  LG 
Sbjct: 69  IPYYA-----VNFEKEYWDKVFTYFLDEYKLGRTPNPDVMC-NKEIKFKAFLEHAESLGA 122

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +  G          +        +          L  E    V  PL  ++K E  ++
Sbjct: 123 DFVATGHYAQVKKVGDEIELLRGVDNNKDQTYFLNQLSQEQLQKVMFPLGGMEKKEVREI 182

Query: 184 AQDIG 188
           A   G
Sbjct: 183 ATKAG 187


>gi|312140823|ref|YP_004008159.1| gmp synthase [Rhodococcus equi 103S]
 gi|325675540|ref|ZP_08155224.1| GMP synthase [Rhodococcus equi ATCC 33707]
 gi|311890162|emb|CBH49480.1| GMP synthase [Rhodococcus equi 103S]
 gi|325553511|gb|EGD23189.1| GMP synthase [Rhodococcus equi ATCC 33707]
          Length = 525

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/185 (11%), Positives = 50/185 (27%), Gaps = 11/185 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+   +       DR+  +  D+G     E +                 
Sbjct: 222 KAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLMRAGERQQVEK---------DFVA 272

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +      +  +       + ++     +            G     L  +A     +  
Sbjct: 273 ATGARLITVDASETFLRELAGVSDPETKRKIIGREFIRSFEGAVSEVLGESAAHGETVD- 331

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +    +  PL  L K E   + +++G
Sbjct: 332 FLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPEDLQFKLVEPLRLLFKDEVRAVGRELG 391

Query: 189 GQDLV 193
             + +
Sbjct: 392 LPEEI 396


>gi|289434792|ref|YP_003464664.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|289171036|emb|CBH27578.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|313633159|gb|EFS00043.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria seeligeri FSL N1-067]
          Length = 371

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/185 (11%), Positives = 47/185 (25%), Gaps = 12/185 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS       ++   V  +   ++   ++  +         ++ +  +  
Sbjct: 9   RVVVGMSGGVDSSVTAHLLKEQGYDVIGIFMKNWDDTDEFGVCTATEDYDDVIRVANQIG 68

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                     +    +      T  +             +     I        A  LG 
Sbjct: 69  IPYYA-----VNFEKEYWDKVFTYFLDEYKLGRTPNPDVMC-NKEIKFKAFLEHAESLGA 122

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +  G          +        +          L  E    V  PL  ++K E  ++
Sbjct: 123 DFVATGHYAQVKKVGDEIELLRGVDNNKDQTYFLNQLSQEQLQKVMFPLGGMEKKEVREI 182

Query: 184 AQDIG 188
           A   G
Sbjct: 183 ATKAG 187


>gi|254829729|ref|ZP_05234384.1| tRNA-specific 2-thiouridylase MnmA [Listeria monocytogenes 10403S]
          Length = 371

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/185 (11%), Positives = 48/185 (25%), Gaps = 12/185 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS       ++   V  +   ++   ++  +         ++ +  +  
Sbjct: 9   RVVVGMSGGVDSSVTAHILKEQGYDVIGIFMKNWDDTDEFGVCTATEDYDDVIRVANQID 68

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                     +    +      T  +             +     I        A  LG 
Sbjct: 69  IPYYA-----VNFEKEYWDKVFTYFLDEYKLGRTPNPDVMC-NKEIKFKAFLEHAESLGA 122

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +  G          +        +          L  +    V  PL  ++K E  ++
Sbjct: 123 DYVATGHYAQVKKVGDEIELLRGVDNNKDQTYFLNQLSQDQLKKVMFPLGAMEKTEVREI 182

Query: 184 AQDIG 188
           A+  G
Sbjct: 183 AKKAG 187


>gi|150401423|ref|YP_001325189.1| ExsB family protein [Methanococcus aeolicus Nankai-3]
 gi|150014126|gb|ABR56577.1| ExsB family protein [Methanococcus aeolicus Nankai-3]
          Length = 203

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 2/61 (3%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A +LFSGG+DSS C     +    VE ++ ++G       +      K +         
Sbjct: 2  KACVLFSGGKDSSLCAIILKNLGYDVELVTINFG--VLDSYKYAQETAKILNLPHKVICL 59

Query: 70 S 70
           
Sbjct: 60 K 60


>gi|118474553|ref|YP_892616.1| tRNA-specific 2-thiouridylase MnmA [Campylobacter fetus subsp.
           fetus 82-40]
 gi|261886048|ref|ZP_06010087.1| tRNA-specific 2-thiouridylase MnmA [Campylobacter fetus subsp.
           venerealis str. Azul-94]
 gi|205811604|sp|A0RQY3|MNMA_CAMFF RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|118413779|gb|ABK82199.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter fetus subsp. fetus 82-40]
          Length = 338

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 50/172 (29%), Gaps = 11/172 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DSS    + L+    V         +     E    V KK+ E +     
Sbjct: 2   KVLVALSGGVDSSMSAKYLLEAGYSVVGCYMKLHSKPGYHEENIRKV-KKVGEFL----- 55

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E HIL    L +  ++ + +      ++   PN        I        A  LG  
Sbjct: 56  -GIETHILD---LEEEFNAKVYEPFVNAYKEGLTPNPCAHCNKNIKFGALWKFAQTLGCD 111

Query: 130 NIVIGVCETDYSG-YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            +  G       G        +        N+  E    +  PL    K + 
Sbjct: 112 KMATGHYARIEDGLIKVASDLSKDQSYFLANISPEILPYIIFPLGDKFKVDI 163


>gi|300703072|ref|YP_003744674.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ralstonia solanacearum CFBP2957]
 gi|299070735|emb|CBJ42030.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ralstonia solanacearum CFBP2957]
          Length = 370

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 46/188 (24%), Gaps = 10/188 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS        +   V  L     + +     C     +  ++++    
Sbjct: 4   KRVVVGMSGGVDSSVTAWLLKQQGYEVVGLFMKNWEDDDDSEYCSTR--QDWIDVVSVAD 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               +   +            +  +   +      PN  V     I        A  LG 
Sbjct: 62  LIGVD---VEAVNFAAEYKDRVFADFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMALGA 118

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             I  G                    T         L          PL  + K    ++
Sbjct: 119 DTIATGHYARVREVDGRFELLKAFDHTKDQSYFLHRLNQAQLSRTLFPLGEIPKTRVREI 178

Query: 184 AQDIGGQD 191
           A +IG  +
Sbjct: 179 AAEIGLPN 186


>gi|289450037|ref|YP_003475194.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289184584|gb|ADC91009.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 380

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 35/143 (24%), Gaps = 5/143 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR--KKIVELMP 65
               L+  SGG DSS      +D    V   +    Q  + E  C         + +   
Sbjct: 3   KGKVLVAMSGGVDSSVAAKLLVDHGYDVTGATMQIWQNEREENHCDRGCCSLSAVEDARR 62

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    ++L           +   +     Q        +  R  I        A  
Sbjct: 63  VAAKIGIPYYVLNFKDDFRKQVIAPFVDA--YWQGETPNPCILCNR-HIKFEEFLQKALM 119

Query: 126 LGITNIVIGVCETDYSGYPDCRH 148
           +G  +I  G            R+
Sbjct: 120 MGFDHIATGHYGRVVYNQATGRY 142


>gi|227532775|ref|ZP_03962824.1| argininosuccinate synthase [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|227189609|gb|EEI69676.1| argininosuccinate synthase [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
          Length = 406

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/171 (11%), Positives = 41/171 (23%), Gaps = 12/171 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                +L +SGG D+S  + W  D+   V  +  + GQ        +             
Sbjct: 1   MTEKIVLAYSGGLDTSVAIPWLKDKGYEVIAVVLNVGQPKADFDAIQQKAL--------- 51

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              ++G    + +    + +   +   +                   + +     +A+  
Sbjct: 52  ---NVGALDSIVVDAQDEFADHYVAPVIKANALYEGDYPLVSALSRPLIIEHLVKIAHAQ 108

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
             T I  G                    E  I   +          +   K
Sbjct: 109 NATAIAHGSTGKGNDQVRFEAAIHALDPEMKIEAPIRDFHWSREEEIDYAK 159


>gi|184155064|ref|YP_001843404.1| tRNA-specific 2-thiouridylase MnmA [Lactobacillus fermentum IFO
           3956]
 gi|229486413|sp|B2GB92|MNMA_LACF3 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|183226408|dbj|BAG26924.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Lactobacillus fermentum IFO 3956]
          Length = 377

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 47/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS        +   V  +             C     +  
Sbjct: 1   MTD--NSHTRVVVGMSGGVDSSVTALLLKQQGYDVVGVFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            +      + +    PN  V     I      
Sbjct: 57  KDVAKVATQIGIPYYSVN---FEKEYWDRVFTYFIDEFKKGRTPNPDVICNKEIKFKAFI 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A +LG   +  G             H      +T         L       V  PL  
Sbjct: 114 EYANQLGADYVATGHYADLKRDEAGNMHLMRAKDQTKDQTYFLSQLDHAQLDKVLFPLAG 173

Query: 175 LKKYETWKLAQDIG 188
             K E  +LA+D G
Sbjct: 174 YTKKEVRQLAKDAG 187


>gi|152991082|ref|YP_001356804.1| GMP synthase [Nitratiruptor sp. SB155-2]
 gi|226739649|sp|A6Q4N8|GUAA_NITSB RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|151422943|dbj|BAF70447.1| GMP synthase (glutamine-hydrolyzing) [Nitratiruptor sp. SB155-2]
          Length = 516

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 54/184 (29%), Gaps = 18/184 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS   +   +   D++  +  D G   + E E    V K ++    K
Sbjct: 219 EDKVLCALSGGVDSSVVTALLYEAIGDKLIPVFVDNGLLREGEREKVEYVFKNML----K 274

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               + +     L  L  I+     + +                 ++ +L         +
Sbjct: 275 VPLIVVDAKERFLNALQGITDPEQKRKIIGHTFIEVFEEEAKKHTDVKYLAQGTLYPDVI 334

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                         S       +TI++      L       +  PL  L K E  KL  +
Sbjct: 335 E-------------SVSVKGPSETIKSHHNVGGLPDWMKFELIEPLRELFKDEVRKLGLE 381

Query: 187 IGGQ 190
           +G  
Sbjct: 382 LGLP 385


>gi|299143928|ref|ZP_07037008.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298518413|gb|EFI42152.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 355

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 42/134 (31%), Gaps = 5/134 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + ++ S +L  SGG DSS C +   ++   V  +        + + +      +  ++++
Sbjct: 1   MTESKSVILGMSGGVDSSVCAALLKEQGYDVTAVFMKNWD--EEDDDGVCTATEDYLDVI 58

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
               +   + + +            +      + +    PN  V     I        A 
Sbjct: 59  RVCSELGIKYYTVN---FEKEYKDRVFSYFLSEYEKGRTPNPDVMCNTEIKFKAFLEFAM 115

Query: 125 RLGITNIVIGVCET 138
           +     I +G    
Sbjct: 116 KFNSDYIAMGHYAR 129


>gi|258424047|ref|ZP_05686929.1| tRNA methyl transferase [Staphylococcus aureus A9635]
 gi|257845668|gb|EEV69700.1| tRNA methyl transferase [Staphylococcus aureus A9635]
          Length = 372

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 49/191 (25%), Gaps = 11/191 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  K    ++  SGG DSS       ++   V  +             C     +   ++
Sbjct: 1   MSNKDIRVVVGMSGGVDSSVTAHVLKEQGYDVIGIFMKNWDDTDENGVC--TATEDYNDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +          + +            +      + +    PN  V     I        A
Sbjct: 59  IEVCNQIGIPYYAVN---FEKEYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLDHA 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLKK 177
             LG   +  G     +                         L  +    V  P+  ++K
Sbjct: 116 MNLGADYVATGHYARIHRHEDGHVEMLRGVDNNKDQTYFLNQLSQQQLSKVMFPIGDIEK 175

Query: 178 YETWKLAQDIG 188
            E  ++A++ G
Sbjct: 176 SEVRRIAEEQG 186


>gi|240103159|ref|YP_002959468.1| putative ATPase of the PP-loop superfamily [Thermococcus
          gammatolerans EJ3]
 gi|239910713|gb|ACS33604.1| Predicted ATPase of the PP-loop superfamily [Thermococcus
          gammatolerans EJ3]
          Length = 262

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 10/73 (13%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L+LFSGG+DSS  L    +    V  L+F +       L   +   +K+        
Sbjct: 21 KRILVLFSGGKDSSLTLYLLKEAGLDVSALTFFHRWSWHETLRWAMKFTRKLG------- 73

Query: 69 DSLGEDHILPLAI 81
              E +++ +  
Sbjct: 74 ---VEHYLVDITD 83


>gi|254480686|ref|ZP_05093933.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [marine gamma proteobacterium HTCC2148]
 gi|214039269|gb|EEB79929.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [marine gamma proteobacterium HTCC2148]
          Length = 363

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 46/188 (24%), Gaps = 10/188 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +  +   ++  SGG DSS       ++   VE L     + +     C    ++   +  
Sbjct: 3   LNASKKVIVGMSGGVDSSVSALLLKEQGYAVEGLFMKNWEEDDGTEYC--TAKEDFADAQ 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                   + H        +   +     +             +  R  I        A 
Sbjct: 61  AVADKLGIKLH--GANFAAEYWDNVFEHFLDEYRAGRTPNPDILCNRE-IKFKAFLDYAL 117

Query: 125 RLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            LG   I  G                              +G         P+  ++K E
Sbjct: 118 TLGADLIATGHYTRLGLAAGQATLLKGLDPNKDQSYFLHAVGHRELAKTLFPVGDIEKPE 177

Query: 180 TWKLAQDI 187
              LA++ 
Sbjct: 178 VRSLAEEY 185


>gi|138893907|ref|YP_001124360.1| GMP synthase [Geobacillus thermodenitrificans NG80-2]
 gi|134265420|gb|ABO65615.1| GMP synthetase [Geobacillus thermodenitrificans NG80-2]
          Length = 513

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 55/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 219 KKVLCALSGGVDSSVAAVLVHRAIGDQLTCIFVDHGLLRKGE---AESVMKTFREQFQMN 275

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       LA L  +S     + +                 N    VF    A   G
Sbjct: 276 VIKVDAKERF-LAKLKGVSDPEQKRKI---------------IGNEFIYVFDDEAAKLEG 319

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +V G   TD          TI++      L  +    +  PL  L K E   L   +
Sbjct: 320 IEFLVQGTLYTDIIESGTATAQTIKSHHNVGGLPEDMKFELIEPLNTLFKDEVRALGTQL 379

Query: 188 GGQDLV 193
           G  D +
Sbjct: 380 GIPDEI 385


>gi|15603201|ref|NP_246275.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pasteurella multocida subsp. multocida str. Pm70]
 gi|14195272|sp|Q9CLA3|MNMA_PASMU RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|12721705|gb|AAK03420.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 383

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 37/141 (26%), Gaps = 4/141 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
            +    +   SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 21  NRKKKVICGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 77

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     +             +  + I F  F    A  
Sbjct: 78  AVCDKLG-IKLHKINFAAEYWDNVFEHFLQEYKAGRTPNPDILCNKEIKFKAFLDYAAED 136

Query: 126 LGITNIVIGVCETDYSGYPDC 146
           LG   I  G           C
Sbjct: 137 LGADYIATGHYVRRGEKDGQC 157


>gi|16803552|ref|NP_465037.1| tRNA-specific 2-thiouridylase MnmA [Listeria monocytogenes EGD-e]
 gi|47097209|ref|ZP_00234773.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria monocytogenes str. 1/2a F6854]
 gi|224500677|ref|ZP_03669026.1| tRNA-specific 2-thiouridylase MnmA [Listeria monocytogenes Finland
           1988]
 gi|224501548|ref|ZP_03669855.1| tRNA-specific 2-thiouridylase MnmA [Listeria monocytogenes FSL
           R2-561]
 gi|254828254|ref|ZP_05232941.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria monocytogenes FSL N3-165]
 gi|254898322|ref|ZP_05258246.1| tRNA-specific 2-thiouridylase MnmA [Listeria monocytogenes J0161]
 gi|254912186|ref|ZP_05262198.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria monocytogenes J2818]
 gi|254936514|ref|ZP_05268211.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria monocytogenes F6900]
 gi|284801902|ref|YP_003413767.1| hypothetical protein LM5578_1657 [Listeria monocytogenes 08-5578]
 gi|284995044|ref|YP_003416812.1| hypothetical protein LM5923_1609 [Listeria monocytogenes 08-5923]
 gi|24638317|sp|Q8Y714|MNMA_LISMO RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|16410941|emb|CAC99590.1| lmo1512 [Listeria monocytogenes EGD-e]
 gi|47014423|gb|EAL05392.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria monocytogenes str. 1/2a F6854]
 gi|258600642|gb|EEW13967.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria monocytogenes FSL N3-165]
 gi|258609108|gb|EEW21716.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria monocytogenes F6900]
 gi|284057464|gb|ADB68405.1| hypothetical protein LM5578_1657 [Listeria monocytogenes 08-5578]
 gi|284060511|gb|ADB71450.1| hypothetical protein LM5923_1609 [Listeria monocytogenes 08-5923]
 gi|293590159|gb|EFF98493.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria monocytogenes J2818]
          Length = 371

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/185 (11%), Positives = 48/185 (25%), Gaps = 12/185 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS       ++   V  +   ++   ++  +         ++ +  +  
Sbjct: 9   RVVVGMSGGVDSSVTAHILKEQGYDVIGIFMKNWDDTDEFGVCTATEDYDDVIRVANQIG 68

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                     +    +      T  +             +     I        A  LG 
Sbjct: 69  IPYYA-----VNFEKEYWDKVFTYFLDEYKLGRTPNPDVMC-NKEIKFKAFLEHAESLGA 122

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +  G          +        +          L  +    V  PL  ++K E  ++
Sbjct: 123 DYVATGHYAQVKKVGDEIELLRGVDNNKDQTYFLNQLSQDQLKKVMFPLGAMEKTEVREI 182

Query: 184 AQDIG 188
           A+  G
Sbjct: 183 AKKAG 187


>gi|313668065|ref|YP_004048349.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methy lt ransferase
           [Neisseria lactamica ST-640]
 gi|313005527|emb|CBN86963.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methy lt ransferase
           [Neisseria lactamica 020-06]
          Length = 383

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 48/193 (24%), Gaps = 15/193 (7%)

Query: 4   IIKKAPSA-----LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           I++   +A     ++  SGG DSS   +    +  +V  +     + +  +  C +    
Sbjct: 14  ILRMNTTANPSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWEDDDNDEYCSIKQ-- 71

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
              +       +      + +          +      +      PN  V     I    
Sbjct: 72  ---DSFDAIAVADIVGIDIDIVNFAAQYKDKVFAYFLKEYSAGRTPNPDVLCNAEIKFKC 128

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLM 173
               A   G   I  G                              L          PL 
Sbjct: 129 FLDYAVGQGADTIATGHYARKEVRNGVHYLLKGLDQNKDQSYFLYRLKPFQLERAIFPLG 188

Query: 174 WLKKYETWKLAQD 186
            L+K E  +LA +
Sbjct: 189 GLEKPEVRRLAAE 201


>gi|295692704|ref|YP_003601314.1| tRNA-specific 2-thiouridylase mnma [Lactobacillus crispatus ST1]
 gi|295030810|emb|CBL50289.1| tRNA-specific 2-thiouridylase mnmA [Lactobacillus crispatus ST1]
          Length = 375

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 50/193 (25%), Gaps = 14/193 (7%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIV 61
           ++  +    ++  SGG DSS        +   V  +   ++   +   +       + + 
Sbjct: 1   MVDNSKTRVVVGMSGGVDSSVSALLLKQQGYDVVGVFMKNWDDTDDSGVCTATEDYEDVK 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           ++  K                       + +    + +    PN  V   + I       
Sbjct: 61  KVADKIGIPYYS------INFEKEYWHRVFEYFLDEYKKGRTPNPDVMCNSQIKFKSFLE 114

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTI------RAIETAINLGMESHVTVHTPLMWL 175
            A  L    I +G             H                 L  E    V  PL  L
Sbjct: 115 FAMDLDADYIAMGHYAKTVKDANGVTHMMRPKDGNKDQTYFLSQLSQEQISKVIFPLANL 174

Query: 176 KKYETWKLAQDIG 188
            K +  ++A   G
Sbjct: 175 TKPQVREIALANG 187


>gi|260102614|ref|ZP_05752851.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus helveticus DSM 20075]
 gi|260083568|gb|EEW67688.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus helveticus DSM 20075]
 gi|328468659|gb|EGF39653.1| tRNA-specific 2-thiouridylase MnmA [Lactobacillus helveticus MTCC
           5463]
          Length = 375

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 49/193 (25%), Gaps = 14/193 (7%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIV 61
           +   +    ++  SGG DSS        +   V  +   ++   +   +       + + 
Sbjct: 1   MFDNSKTRVVVGMSGGVDSSVSALLLKQQGYDVVGVFMKNWDDTDDSGVCTATEDYEDVK 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           ++  K                       + +    + +    PN  V   + I       
Sbjct: 61  KVADKIGIPYYS------INFEKEYWHRVFEYFLNEYKKGRTPNPDVMCNSQIKFKSFLD 114

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTI------RAIETAINLGMESHVTVHTPLMWL 175
            A  L    I +G             H                 L  +    V  PL  L
Sbjct: 115 FAMDLDADYIAMGHYAKTVKDADGLTHMMRPKDGNKDQTYFLSQLNQDQIKKVIFPLANL 174

Query: 176 KKYETWKLAQDIG 188
            K +  ++A   G
Sbjct: 175 TKPQVREIALANG 187


>gi|116628661|ref|YP_821280.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus thermophilus
           LMD-9]
 gi|122266745|sp|Q03I88|MNMA_STRTD RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|116101938|gb|ABJ67084.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus thermophilus LMD-9]
          Length = 373

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 48/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MTD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIDIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A  LG   +  G             H    A            L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYAQVVRDEDGIVHMLRGADNNKDQTYFLSQLSQEQLQKAMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  ++A+  G
Sbjct: 174 LQKSEVREIAERAG 187


>gi|16331412|ref|NP_442140.1| GMP synthase [Synechocystis sp. PCC 6803]
 gi|1346218|sp|P49057|GUAA_SYNY3 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|1001583|dbj|BAA10210.1| GMP synthetase [Synechocystis sp. PCC 6803]
          Length = 542

 Score = 49.9 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 53/185 (28%), Gaps = 11/185 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSST          D +  +  D G   K E E       ++VEL     
Sbjct: 240 RVLLALSGGVDSSTLAFLLHRAIGDNLTCMFIDQGFMRKGEPE-------RLVELFDHQF 292

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               +        L  +       +   K +        V       L     LA     
Sbjct: 293 HIPVQYVNARDRFLKQLEG---VTDPEEKRRLIGHEFIQVFEEESNRLGPFDYLAQGTLY 349

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
            +++            +     I++      L       +  PL  L K E  KL + IG
Sbjct: 350 PDVIESADSNVDPKTGERVAVKIKSHHNVGGLPKNLRFKLVEPLRKLFKDEVRKLGRSIG 409

Query: 189 GQDLV 193
             + +
Sbjct: 410 LPEEI 414


>gi|307182454|gb|EFN69689.1| Argininosuccinate synthase [Camponotus floridanus]
          Length = 414

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 26/69 (37%), Gaps = 5/69 (7%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
          M D+       +L +SGG D+S  L W   +  +V     + GQ    + +       KI
Sbjct: 1  MADL---KKKVILAYSGGLDTSCILFWLKKKGFQVIAYVANIGQD--EDFDAVREKALKI 55

Query: 61 VELMPKWKD 69
            +     D
Sbjct: 56 GAIKVVIDD 64


>gi|257892743|ref|ZP_05672396.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium 1,231,408]
 gi|257829122|gb|EEV55729.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium 1,231,408]
          Length = 373

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 49/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MTD--NSQTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +          + + +    + +    PN  V     I      
Sbjct: 57  KDVAKVAAQIGIPYYSVN---FEKEYWNRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYAMDLGADYVATGHYAQVTRDENGVVHMLRGVDNNKDQTYFLSQLSQEQLSKTMFPLGG 173

Query: 175 LKKYETWKLAQDIG 188
           ++K E   +A+  G
Sbjct: 174 MEKSEVRAIAERAG 187


>gi|108563707|ref|YP_628023.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter pylori HPAG1]
 gi|107837480|gb|ABF85349.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Helicobacter pylori HPAG1]
          Length = 353

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 52/184 (28%), Gaps = 17/184 (9%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           N+ +K      +L SGG DSS       ++   +  +         ++L          +
Sbjct: 7   NERLKM--KIAVLLSGGVDSSYSAYSLKEQGHELVGIY--------LKLHASEKKHDLYI 56

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +   K  + LG    L +        S++        ++   PN       ++    A  
Sbjct: 57  KNAQKACEFLGIP--LEVLDFQKDFKSAVYDEFISAYEEGQTPNPCALCNPLMKFGLALD 114

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWLK 176
            A +LG   I  G                    T         L  E    +  PL  L 
Sbjct: 115 HALKLGCEKIATGHYARVKEIDKVSYIQEAVDKTKDQSYFLYALEHEVIAKLVFPLGDLL 174

Query: 177 KYET 180
           K + 
Sbjct: 175 KKDI 178


>gi|218768524|ref|YP_002343036.1| tRNA-specific 2-thiouridylase MnmA [Neisseria meningitidis Z2491]
 gi|11277501|pir||H81798 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC
           2.1.1.61) NMA1744 [imported] - Neisseria meningitidis
           (strain Z2491 serogroup A)
 gi|121052532|emb|CAM08872.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria meningitidis Z2491]
          Length = 383

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 48/193 (24%), Gaps = 15/193 (7%)

Query: 4   IIKKAPSA-----LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           I++   +A     ++  SGG DSS   +    +  +V  +     + +  +  C +    
Sbjct: 14  ILRMNTTANPSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWEDDDNDEYCSIKQ-- 71

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
              +       +      + +          +      +      PN  V     I    
Sbjct: 72  ---DSFDAIAVADIVGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLCNAEIKFKC 128

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLM 173
               A   G   I  G                              L          PL 
Sbjct: 129 FLDYAVGQGADTIATGHYARKEVRNGVHYLLKGLDQNKDQSYFLYRLKPFQLERAIFPLG 188

Query: 174 WLKKYETWKLAQD 186
            L+K E  +LA +
Sbjct: 189 GLEKPEVRRLAAE 201


>gi|15927201|ref|NP_374734.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
           aureus N315]
 gi|49483866|ref|YP_041090.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|57650503|ref|YP_186516.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus COL]
 gi|148268102|ref|YP_001247045.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150394170|ref|YP_001316845.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
           aureus JH1]
 gi|151221735|ref|YP_001332557.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|161509848|ref|YP_001575507.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|253316605|ref|ZP_04839818.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|253732278|ref|ZP_04866443.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus USA300_TCH959]
 gi|253733127|ref|ZP_04867292.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus TCH130]
 gi|257425746|ref|ZP_05602170.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428406|ref|ZP_05604804.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257431044|ref|ZP_05607423.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257433730|ref|ZP_05610088.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus subsp.
           aureus E1410]
 gi|257436645|ref|ZP_05612689.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus M876]
 gi|257793696|ref|ZP_05642675.1| tRNA methyl transferase [Staphylococcus aureus A9781]
 gi|258411005|ref|ZP_05681285.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus A9763]
 gi|258420193|ref|ZP_05683148.1| tRNA methyl transferase [Staphylococcus aureus A9719]
 gi|258438195|ref|ZP_05689479.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus A9299]
 gi|258443658|ref|ZP_05691997.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus A8115]
 gi|258446865|ref|ZP_05695019.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus A6300]
 gi|258448779|ref|ZP_05696891.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus A6224]
 gi|258450551|ref|ZP_05698613.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus A5948]
 gi|258453598|ref|ZP_05701576.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus A5937]
 gi|262048616|ref|ZP_06021499.1| (5-methylaminomethyl-2-thiouridylate)-methyltran sferase
           [Staphylococcus aureus D30]
 gi|269203247|ref|YP_003282516.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
           aureus ED98]
 gi|282893124|ref|ZP_06301358.1| tRNA methyl transferase [Staphylococcus aureus A8117]
 gi|282904202|ref|ZP_06312090.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus C160]
 gi|282906028|ref|ZP_06313883.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282908941|ref|ZP_06316759.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911258|ref|ZP_06319060.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914426|ref|ZP_06322212.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus M899]
 gi|282916890|ref|ZP_06324648.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus D139]
 gi|282919396|ref|ZP_06327131.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus C427]
 gi|282920169|ref|ZP_06327894.1| tRNA methyl transferase [Staphylococcus aureus A9765]
 gi|282924721|ref|ZP_06332389.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus C101]
 gi|282928255|ref|ZP_06335860.1| tRNA methyl transferase [Staphylococcus aureus A10102]
 gi|283958382|ref|ZP_06375833.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus A017934/97]
 gi|284024678|ref|ZP_06379076.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
           aureus 132]
 gi|293503501|ref|ZP_06667348.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293510518|ref|ZP_06669224.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus M809]
 gi|293531058|ref|ZP_06671740.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus M1015]
 gi|294848651|ref|ZP_06789397.1| tRNA methyl transferase [Staphylococcus aureus A9754]
 gi|295406743|ref|ZP_06816548.1| tRNA methyl transferase [Staphylococcus aureus A8819]
 gi|295428198|ref|ZP_06820830.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296275907|ref|ZP_06858414.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297245675|ref|ZP_06929540.1| tRNA methyl transferase [Staphylococcus aureus A8796]
 gi|297590835|ref|ZP_06949473.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus MN8]
 gi|304380782|ref|ZP_07363449.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus ATCC BAA-39]
 gi|24638330|sp|Q99TM8|MNMA_STAAN RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|56749735|sp|Q6GG82|MNMA_STAAR RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|71153356|sp|Q5HFE1|MNMA_STAAC RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|172048920|sp|A6QHG3|MNMA_STAAE RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|189040510|sp|A6U290|MNMA_STAA2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|189040511|sp|A5ITE6|MNMA_STAA9 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|189040512|sp|A8Z4F9|MNMA_STAAT RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205829108|sp|Q2FGA5|MNMA_STAA3 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205829109|sp|Q2FXV6|MNMA_STAA8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|13701419|dbj|BAB42713.1| (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Staphylococcus aureus subsp. aureus N315]
 gi|49241995|emb|CAG40692.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|57284689|gb|AAW36783.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus COL]
 gi|147741171|gb|ABQ49469.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus JH9]
 gi|149946622|gb|ABR52558.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus JH1]
 gi|150374535|dbj|BAF67795.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Staphylococcus aureus subsp. aureus str. Newman]
 gi|160368657|gb|ABX29628.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus USA300_TCH1516]
 gi|253724067|gb|EES92796.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus USA300_TCH959]
 gi|253728883|gb|EES97612.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus TCH130]
 gi|257271440|gb|EEV03586.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275247|gb|EEV06734.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278247|gb|EEV08889.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257281823|gb|EEV11960.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus subsp.
           aureus E1410]
 gi|257283996|gb|EEV14119.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus M876]
 gi|257787668|gb|EEV26008.1| tRNA methyl transferase [Staphylococcus aureus A9781]
 gi|257840155|gb|EEV64619.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus A9763]
 gi|257843904|gb|EEV68298.1| tRNA methyl transferase [Staphylococcus aureus A9719]
 gi|257848239|gb|EEV72230.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus A9299]
 gi|257851064|gb|EEV75007.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus A8115]
 gi|257854440|gb|EEV77389.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus A6300]
 gi|257858057|gb|EEV80946.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus A6224]
 gi|257861709|gb|EEV84508.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus A5948]
 gi|257864329|gb|EEV87079.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus A5937]
 gi|259163263|gb|EEW47822.1| (5-methylaminomethyl-2-thiouridylate)-methyltran sferase
           [Staphylococcus aureus D30]
 gi|262075537|gb|ACY11510.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
           aureus ED98]
 gi|269941107|emb|CBI49493.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           TW20]
 gi|282313556|gb|EFB43951.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus C101]
 gi|282317206|gb|EFB47580.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus C427]
 gi|282319377|gb|EFB49729.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus D139]
 gi|282321607|gb|EFB51932.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus M899]
 gi|282324953|gb|EFB55263.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327205|gb|EFB57500.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331320|gb|EFB60834.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282590062|gb|EFB95144.1| tRNA methyl transferase [Staphylococcus aureus A10102]
 gi|282594517|gb|EFB99502.1| tRNA methyl transferase [Staphylococcus aureus A9765]
 gi|282595820|gb|EFC00784.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus C160]
 gi|282764442|gb|EFC04568.1| tRNA methyl transferase [Staphylococcus aureus A8117]
 gi|283470898|emb|CAQ50109.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus ST398]
 gi|283790531|gb|EFC29348.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus A017934/97]
 gi|285817303|gb|ADC37790.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus 04-02981]
 gi|290920326|gb|EFD97392.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus M1015]
 gi|291095167|gb|EFE25432.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291466882|gb|EFF09402.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus M809]
 gi|294824677|gb|EFG41100.1| tRNA methyl transferase [Staphylococcus aureus A9754]
 gi|294968490|gb|EFG44514.1| tRNA methyl transferase [Staphylococcus aureus A8819]
 gi|295128556|gb|EFG58190.1| tRNA methyl transferase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297177326|gb|EFH36578.1| tRNA methyl transferase [Staphylococcus aureus A8796]
 gi|297575721|gb|EFH94437.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus MN8]
 gi|302333295|gb|ADL23488.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus JKD6159]
 gi|302751450|gb|ADL65627.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus str. JKD6008]
 gi|304340658|gb|EFM06591.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus ATCC BAA-39]
 gi|312437911|gb|ADQ76982.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus TCH60]
 gi|312830008|emb|CBX34850.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|315129903|gb|EFT85893.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus CGS03]
 gi|315195521|gb|EFU25908.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus CGS00]
 gi|315198681|gb|EFU29009.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus CGS01]
 gi|320140492|gb|EFW32346.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320144031|gb|EFW35800.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus MRSA177]
 gi|323439031|gb|EGA96763.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus O11]
 gi|329314296|gb|AEB88709.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus subsp.
           aureus T0131]
 gi|329727166|gb|EGG63622.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus 21172]
 gi|329728421|gb|EGG64858.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus 21189]
          Length = 372

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 49/191 (25%), Gaps = 11/191 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  K    ++  SGG DSS       ++   V  +             C     +   ++
Sbjct: 1   MSNKDIRVVVGMSGGVDSSVTAHVLKEQGYDVIGIFMKNWDDTDENGVC--TATEDYNDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +          + +            +      + +    PN  V     I        A
Sbjct: 59  IEVCNQIGIPYYAVN---FEKEYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLDHA 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLKK 177
             LG   +  G     +                         L  +    V  P+  ++K
Sbjct: 116 MNLGADYVATGHYARIHRHEDGHVEMLRGVDNNKDQTYFLNQLSQQQLSKVMFPIGDIEK 175

Query: 178 YETWKLAQDIG 188
            E  ++A++ G
Sbjct: 176 SEVRRIAEEQG 186


>gi|323486022|ref|ZP_08091353.1| GMP synthase [Clostridium symbiosum WAL-14163]
 gi|323400589|gb|EGA92956.1| GMP synthase [Clostridium symbiosum WAL-14163]
          Length = 513

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 55/189 (29%), Gaps = 21/189 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +  AL   SGG DSS            ++  +  D+G   K E +    +          
Sbjct: 215 SGRALCALSGGVDSSVAAVMMAKAIGKQLTCVFVDHGLLRKNEGDEVEAI---------- 264

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G +    L  +   +     + +A                   F+      A ++
Sbjct: 265 ----FGPEGQYDLNFVRVNAQERFYEKLAGVSDTEQKRKII----GEEFIRVFEEEAKKI 316

Query: 127 G-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLA 184
           G +  +V G    D       +   I++      L        +  PL  L K E  K  
Sbjct: 317 GKVDFLVQGTIYPDVIESGLGKSAVIKSHHNVGGLPEHVDFKEIIEPLRMLFKDEVRKAG 376

Query: 185 QDIGGQDLV 193
            ++G  + +
Sbjct: 377 LELGIPERL 385


>gi|299117474|emb|CBN73977.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 491

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/190 (11%), Positives = 39/190 (20%), Gaps = 7/190 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS        +   V  +                     + +     
Sbjct: 35  KQRVVVGMSGGVDSSVVAMLLHQQGYEVVGVFMRNWDEQDETGSDVCAADTDLEDARRVG 94

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    +  +          +     + +  N+                A       
Sbjct: 95  YHLGIPVKTVDFSREYWNEVFEPSLQELDRCRTPNMDVACNRFIKFDAFREHALGRMSAD 154

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH-------VTVHTPLMWLKKYET 180
                         G    R    +A +   +               V  PL  L K E 
Sbjct: 155 FVATGHYARTAPGPGGDWSRPVLRQAEDGNKDQTYFLSGVPSEGLAKVLFPLGGLTKPEV 214

Query: 181 WKLAQDIGGQ 190
            +LA++ G  
Sbjct: 215 RRLAEEGGLP 224


>gi|260591395|ref|ZP_05856853.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella veroralis F0319]
 gi|260536761|gb|EEX19378.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella veroralis F0319]
          Length = 360

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/183 (12%), Positives = 45/183 (24%), Gaps = 7/183 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K     +L SGG DSS  +          +      G   K E +C     + +      
Sbjct: 7   KDKRIAVLLSGGVDSSVVVYEFARLGLHPDCFYIKIGPEEKEEWDCNSE--EDLEMATAV 64

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 +  ++      +      +  +             +  R I F  F A + +  
Sbjct: 65  AHRYGCKLQVID--CHKEYWDQVTSYTMEKVKAGFTPNPDVMCNRLIKFGAFDAKMGHDY 122

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKL 183
            +             G            +    L       +     P+    K E  ++
Sbjct: 123 DLIATGHYAQTEWIDGRKWLTTSPDPVKDQTDFLAQIYDWQLKKAIFPIGHYAKNEVREI 182

Query: 184 AQD 186
           A+ 
Sbjct: 183 AEQ 185


>gi|209519013|ref|ZP_03267821.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia sp. H160]
 gi|209500525|gb|EEA00573.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia sp. H160]
          Length = 416

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 45/192 (23%), Gaps = 11/192 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K    ++  SGG DSS       ++   V  L     + +     C         + +
Sbjct: 1   MSKR-KVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDSEYCSTRQ-----DWI 54

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                +      +            +      +      PN  V     I        A 
Sbjct: 55  DVVSVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAM 114

Query: 125 RLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            LG   I  G                    T         L          PL  + K +
Sbjct: 115 SLGAETIATGHYARVRENDGRFELLKALDHTKDQSYFLHRLNQAQLSKTLFPLGEIPKTK 174

Query: 180 TWKLAQDIGGQD 191
             ++A  IG  +
Sbjct: 175 VREIAAQIGLPN 186


>gi|254423006|ref|ZP_05036724.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Synechococcus sp. PCC 7335]
 gi|196190495|gb|EDX85459.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Synechococcus sp. PCC 7335]
          Length = 365

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 50/185 (27%), Gaps = 13/185 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDY----GQRNKVELECRLCVRKKIVELMP 65
             ++  SGG DSS   +   ++   V  L+       GQ     +     +   +     
Sbjct: 3   KIVVGLSGGVDSSVAAATLHNQGHEVIGLTLWLMKGKGQCCSEGMTDAAKLCDHLGIAYN 62

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                   +  +   ++   S               +  N+ V    ++        A  
Sbjct: 63  VVDSREVFEKYIVNYLVEGYSRGVTPLP-------CSQCNSTVKFGPMLDYAVNEMGADY 115

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYETWKL 183
           +   +        +   Y   R       ++    +L          PL    K ET K+
Sbjct: 116 IATGHYARITHNLETGRYELRRAVDRNKDQSYFLYDLSQTHLAASQFPLGDTTKSETRKI 175

Query: 184 AQDIG 188
           A  +G
Sbjct: 176 AASLG 180


>gi|118602851|ref|YP_904066.1| hypothetical protein Rmag_0880 [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|118567790|gb|ABL02595.1| conserved hypothetical protein [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 360

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 50/177 (28%), Gaps = 8/177 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK-KIVE 62
           +I K   A+ L SGG DS       LD+   +E ++F  G   +         +K K+  
Sbjct: 13  MINKKIKAISLISGGLDSLLSTKLMLDQGIYIEGINFFTGFCVEGHTHAIRKQKKDKLKR 72

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
               W        +  + ++ +           +    +       P  +    +     
Sbjct: 73  NNALWVAEQLGIKLHIIDVIEEYRDV-------LLNPKHGYGKNMNPCLDCKSFMVRKAK 125

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            + L      I   E         R + +  ++T           +    +   K E
Sbjct: 126 EWILEYEFDFIITGEVMGQRPMSQRKEAMPIVQTESGANDLLLRPLCAKHLPATKAE 182


>gi|120554680|ref|YP_959031.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Marinobacter aquaeolei VT8]
 gi|205816919|sp|A1U1H5|MNMA_MARAV RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|120324529|gb|ABM18844.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Marinobacter aquaeolei VT8]
          Length = 392

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 47/187 (25%), Gaps = 13/187 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS       D+  +VE L       +     C       + +       
Sbjct: 14  RVIVGMSGGVDSSVAAWLLKDQGYQVEGLFMKNWDEDDGTEYC--TAMTDLADAQAVADA 71

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              + H    A         + ++   +      PN  +     +        A  LG  
Sbjct: 72  IGIKLHT---ASFAAEYWDRVFEHFLSEYSAGRTPNPDILCNKEVKFRAFLDYAVTLGAD 128

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--------WLKKYETW 181
            I  G                +                V    +         L+K E  
Sbjct: 129 YIATGHYTRQRPLNDGSGKAQLLKGLDPNKDQSYFLHAVSGERIARTLFPVGELEKPEVR 188

Query: 182 KLAQDIG 188
           ++A++ G
Sbjct: 189 RIAEEQG 195


>gi|297528666|ref|YP_003669941.1| GMP synthase, large subunit [Geobacillus sp. C56-T3]
 gi|297251918|gb|ADI25364.1| GMP synthase, large subunit [Geobacillus sp. C56-T3]
          Length = 510

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 55/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 216 KKVLCALSGGVDSSVAAVLVHRAIGDQLTCIFVDHGLLRKGE---AESVMKTFREQFQMN 272

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       LA L  ++     + +                 N    VF    A   G
Sbjct: 273 VIKVDAKDRF-LAKLKGVTDPEQKRKI---------------IGNEFIYVFDDEAAKFEG 316

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +V G   TD          TI++      L  +    +  PL  L K E   L   +
Sbjct: 317 IEFLVQGTLYTDIIESGTATAQTIKSHHNVGGLPEDMKFELIEPLNTLFKDEVRALGTQL 376

Query: 188 GGQDLV 193
           G  D +
Sbjct: 377 GIPDEI 382


>gi|317127134|ref|YP_004093416.1| GMP synthase, large subunit [Bacillus cellulosilyticus DSM 2522]
 gi|315472082|gb|ADU28685.1| GMP synthase, large subunit [Bacillus cellulosilyticus DSM 2522]
          Length = 512

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 57/187 (30%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS   +       D++  +  D+G   K E      V K   E    
Sbjct: 217 NKKVLCALSGGVDSSVVAALIHKAIGDQLICMFIDHGLLRKGE---ADSVMKTFSE---- 269

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G D  +      +   S L      + +   + N F+                  
Sbjct: 270 -----GFDMNVIKIDAQERFLSKLEGVKDPEQKRKIIGNEFIYVFEEEAGKLTDVDFLAQ 324

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G     I    TD +        TI++      L  + H  +  PL  L K E  ++  +
Sbjct: 325 GTLYTDIIESGTDTA-------QTIKSHHNVGGLPEDMHFKLIEPLNTLFKDEVREVGTE 377

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 378 LGLPEEI 384


>gi|255530904|ref|YP_003091276.1| GMP synthase [Pedobacter heparinus DSM 2366]
 gi|255343888|gb|ACU03214.1| GMP synthase, large subunit [Pedobacter heparinus DSM 2366]
          Length = 508

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 53/188 (28%), Gaps = 19/188 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS             +  +  D G   K E    L   K +      
Sbjct: 212 NDKVVLALSGGVDSSVAAILLHKAIGKNLHCIFVDNGLLRKDEYAAVLEQYKHLG----- 266

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 +     L+ L  +S   L +    ++      +     +++ +L         +
Sbjct: 267 LNIKGVDAKDRFLSQLAGVSDPELKRKAIGRVFIEVFDDEAHQVQDVKWLAQGTIYPDII 326

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                         S        TI++      L     + V  PL  L K E  ++   
Sbjct: 327 E-------------SVSVKGPSATIKSHHNVGGLPDFMKLKVVEPLNTLFKDEVRRVGTS 373

Query: 187 IGGQDLVN 194
           +G +  + 
Sbjct: 374 LGLEHFII 381


>gi|311747046|ref|ZP_07720831.1| argininosuccinate synthase [Algoriphagus sp. PR1]
 gi|126578747|gb|EAZ82911.1| argininosuccinate synthase [Algoriphagus sp. PR1]
          Length = 397

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 26/75 (34%), Gaps = 1/75 (1%)

Query: 9  PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             +L +SGG D++ C           V  +  + G  ++ EL       + +     K 
Sbjct: 2  KKVVLAYSGGLDTTFCALHLSKELGYEVHAVLVNTGGFSEEELTTIQNRAENLGIASFKV 61

Query: 68 KDSLGEDHILPLAIL 82
           D +   +   +  L
Sbjct: 62 LDVVETYYQEVIKFL 76


>gi|118617523|ref|YP_905855.1| tRNA-specific 2-thiouridylase MnmA [Mycobacterium ulcerans Agy99]
 gi|166235069|sp|A0PPW5|MNMA_MYCUA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205822174|sp|B2HIE6|MNMA_MYCMM RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|118569633|gb|ABL04384.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase TrmU
           [Mycobacterium ulcerans Agy99]
          Length = 363

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 41/181 (22%), Gaps = 4/181 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL-MPKWK 68
             L   SGG DSS   +  +D    V  +                    K       +  
Sbjct: 2   KVLAAMSGGVDSSVAAARMVDAGHDVVGVHLALSTAPGALRTGSRGCCSKEDASDARRVA 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D LG    +      +     +  +          PN  +     I        A  LG 
Sbjct: 62  DVLGIPFYVW--DFAERFKEDVIDDFVSSYARGETPNPCIRCNQRIKFSALYAKALALGF 119

Query: 129 TNIVIGVCETDYSGY-PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +V G       G                  L  E       P+    K +  + A   
Sbjct: 120 DVVVTGHYARLSEGRLRRAVDQDKDQSYVLAVLTAEQLRHAMFPIGDTPKPQIREEASRR 179

Query: 188 G 188
           G
Sbjct: 180 G 180


>gi|15902166|ref|NP_357716.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pneumoniae R6]
 gi|15457661|gb|AAK98926.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae R6]
          Length = 391

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 53/194 (27%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D  K     ++  SGG DSS       ++   V  +             C     +  
Sbjct: 19  MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 74

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            + +    + +    PN  V     I      
Sbjct: 75  KDVVAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 131

Query: 121 TLAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 132 DYAMTLGADYVATGHYARVARDEDGTVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 191

Query: 175 LKKYETWKLAQDIG 188
           LKK E  KLA++ G
Sbjct: 192 LKKPEVRKLAEEAG 205


>gi|332364140|gb|EGJ41917.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus sanguinis SK49]
          Length = 373

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 49/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWERVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYALTLGADYVATGHYAQVKRDQEGVVHMLRGKDNNKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E   +A+  G
Sbjct: 174 LEKPEVRAIAERAG 187


>gi|325689331|gb|EGD31337.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus sanguinis SK115]
          Length = 373

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 49/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWERVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYALTLGADYVATGHYAQVKRDQDGLVHMLRGKDNNKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E   +A+  G
Sbjct: 174 LEKPEVRAIAERAG 187


>gi|307705802|ref|ZP_07642645.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus mitis SK597]
 gi|307620634|gb|EFN99727.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus mitis SK597]
          Length = 373

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 50/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M++  K     ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSENSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMW 174
             A  LG   +  G             H                 L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYARVARDEDGTVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  +LA++ G
Sbjct: 174 LEKPEVRRLAEEAG 187


>gi|237751996|ref|ZP_04582476.1| tRNA methyltransferase [Helicobacter winghamensis ATCC BAA-430]
 gi|229376563|gb|EEO26654.1| tRNA methyltransferase [Helicobacter winghamensis ATCC BAA-430]
          Length = 325

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 31/96 (32%), Gaps = 2/96 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL LFSGG DS   +    D    V  L  + G   K   +    +R+++ ++  + K 
Sbjct: 2   KALALFSGGLDSLLAIKIIKDMGVDVLALHLNIGFGAKR--DKSEILRQRLDQIGVELKI 59

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN 105
                      +           N  +    N   +
Sbjct: 60  VDIRKQFFDDVLFKPKFGYGKYFNPCIDCHANMFSH 95


>gi|221195451|ref|ZP_03568506.1| GMP synthase [glutamine-hydrolyzing] [Atopobium rimae ATCC 49626]
 gi|221184638|gb|EEE17030.1| GMP synthase [glutamine-hydrolyzing] [Atopobium rimae ATCC 49626]
          Length = 532

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 52/187 (27%), Gaps = 16/187 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +       D++  +  ++G   K E E    V +        
Sbjct: 222 NGRVILALSGGVDSSVVAALVHRAIGDQLTCVFVNHGMLRKGEPEMVEQVFRT------- 274

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            + ++   H+        +           ++        F      +  V         
Sbjct: 275 -QFNVPLVHVHAEERYAKLLAGVTEPEQKRRLIGTEFWKVFFEEAQKLDGVQFL------ 327

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                +        +     +  TI++    I      H  +  PL    K E  +L   
Sbjct: 328 -AQGTIYPDIIESGARKTGGKASTIKSHHNLIPFPEGVHFDLIEPLDHFFKDEVRELGVS 386

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 387 LGLPENL 393


>gi|198282708|ref|YP_002219029.1| Argininosuccinate synthase [Acidithiobacillus ferrooxidans ATCC
          53993]
 gi|218666840|ref|YP_002424900.1| argininosuccinate synthase [Acidithiobacillus ferrooxidans ATCC
          23270]
 gi|198247229|gb|ACH82822.1| Argininosuccinate synthase [Acidithiobacillus ferrooxidans ATCC
          53993]
 gi|218519053|gb|ACK79639.1| argininosuccinate synthase [Acidithiobacillus ferrooxidans ATCC
          23270]
          Length = 399

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 6/77 (7%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE--- 62
               +L +SGG D+S  L W  D++   V T + D GQ  ++E        +K+     
Sbjct: 1  MVKKVVLAYSGGLDTSVILKWLQDQYQCDVVTFTADIGQGEELEP--ARAKAEKLGAREI 58

Query: 63 LMPKWKDSLGEDHILPL 79
           +   +     D++ P+
Sbjct: 59 FIDDLRQEFVRDYVFPM 75


>gi|167751814|ref|ZP_02423941.1| hypothetical protein ALIPUT_00055 [Alistipes putredinis DSM 17216]
 gi|167660055|gb|EDS04185.1| hypothetical protein ALIPUT_00055 [Alistipes putredinis DSM 17216]
          Length = 448

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 44/188 (23%), Gaps = 13/188 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE----------CRLCVRKK 59
             ++  SGG DSS            V  L           LE              V ++
Sbjct: 3   RVVIGLSGGVDSSVAAYLLQQAGHEVIGLFMINWHDTTGTLEGDCPWHDDRLFAELVARR 62

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +         S      +   +  + +    T N  +        + F+     +   F 
Sbjct: 63  LDIPFHTVDLSDQYRRRVVDYMFSEYAKG-RTPNPDVLCNREIKFDVFLKEALKLGADFV 121

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           AT  Y                                   L  E       P+  L K E
Sbjct: 122 ATGHYCRKAEE--TAPDGRTIYKLLAGSDPNKDQSYFLCQLSQEQLSRALFPVGHLLKPE 179

Query: 180 TWKLAQDI 187
             ++A+ +
Sbjct: 180 VRRIAEQM 187


>gi|149928237|ref|ZP_01916481.1| argininosuccinate synthase [Limnobacter sp. MED105]
 gi|149823043|gb|EDM82284.1| argininosuccinate synthase [Limnobacter sp. MED105]
          Length = 409

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 42/157 (26%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D     + T + D GQ  ++E         K    
Sbjct: 1   MSDINKVVLAYSGGLDTSVILKWLQDTYGCEIVTFTADLGQGEELEP--ARQKALKFGIK 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                     +  +           + T      +   ++    +  R I         A
Sbjct: 59  PENIYIDDVREEFV--RDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIDIARETGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         +   Y       I A     +L
Sbjct: 117 ISHGATGKGNDQVRFELGAYALMPGVKIIAPWREWDL 153


>gi|148983522|ref|ZP_01816841.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae SP3-BS71]
 gi|221231050|ref|YP_002510202.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae ATCC 700669]
 gi|254811464|sp|B8ZK04|MNMA_STRPJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|147923669|gb|EDK74781.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae SP3-BS71]
 gi|220673510|emb|CAR67990.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae ATCC 700669]
 gi|301799298|emb|CBW31824.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae OXC141]
          Length = 373

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 52/194 (26%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            + +    + +    PN  V     I      
Sbjct: 57  KDVVAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYAITLGADYVATGHYARVARDEDGTVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  KLA++ G
Sbjct: 174 LEKPEVRKLAEEAG 187


>gi|139438181|ref|ZP_01771734.1| Hypothetical protein COLAER_00722 [Collinsella aerofaciens ATCC
           25986]
 gi|133776378|gb|EBA40198.1| Hypothetical protein COLAER_00722 [Collinsella aerofaciens ATCC
           25986]
          Length = 532

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 64/235 (27%), Gaps = 38/235 (16%)

Query: 9   PSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVR---------- 57
              +L  SGG DSS   +  A     ++  +  ++G   K E E    V           
Sbjct: 219 DRVILALSGGVDSSVVAALGARAVGKQMTCVFINHGLLRKGEPEQVEEVFTKQFDVDFIH 278

Query: 58  ----KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
                +  EL+    +   +  I+      +    +       K        T  P    
Sbjct: 279 VHAEDRYAELLAGVTEPEEKRRIIGTQFWKEFFAVAQQLETDGKPVKYLAQGTIYPDIIE 338

Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV----- 168
                       +   + +I   E  +    +      +    A+ L +     +     
Sbjct: 339 SGARKTGGKTATIKSHHNLIPFPEGVHFDLIEPLDHFFKDEVRALGLALGLPGHIVFRQP 398

Query: 169 ---------HTPLMWLKKYETWKLAQDIGGQDL---VNLILEES------HTCYL 205
                        +  +K E  K A  I  ++L      + E++      H+C+ 
Sbjct: 399 FPGPGLAIRIIGAVDKEKLEILKNADAIVREELDAYNQRLFEQTGERNSEHSCWQ 453


>gi|34557952|ref|NP_907767.1| tRNA-specific 2-thiouridylase MnmA [Wolinella succinogenes DSM
           1740]
 gi|81653445|sp|Q7M8I9|MNMA_WOLSU RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|34483670|emb|CAE10667.1| TRNA METHYLTRANSFERASE [Wolinella succinogenes]
          Length = 345

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 54/195 (27%), Gaps = 17/195 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIVELMPK 66
              LL SGG DSS       +    V  +     D   ++   ++    V +K+      
Sbjct: 2   KVALLMSGGIDSSYSAYLLQEAGHEVVGIYLKLHDNDLKHAQNIQNIEKVSQKLG----- 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 E HI     L          +     Q    PN        +   FA   A  L
Sbjct: 57  -----IETHIFDAKELFKKHVYDYFVDS---YQKGLTPNPCAFCNPFMKFGFALERALEL 108

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLAQ 185
           G   I  G       G      D  +     +    ES +  +  PL    K E    A 
Sbjct: 109 GCEKIATGHYARVKEGRIQEAKDQSKDQSYFLFGLKESVISRLIFPLGDRLKSEIKPEAL 168

Query: 186 DIGGQDLVNLILEES 200
           +I          +ES
Sbjct: 169 EILPWLGTLESYKES 183


>gi|116747617|ref|YP_844304.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Syntrophobacter fumaroxidans MPOB]
 gi|205828997|sp|A0LEL7|MNMA_SYNFM RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|116696681|gb|ABK15869.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Syntrophobacter fumaroxidans MPOB]
          Length = 362

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 41/146 (28%), Gaps = 4/146 (2%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR-LCVRKKIVEL 63
           ++++    +  SGG DS        ++ + V  +   +   ++    C    +R+K   L
Sbjct: 1   MERSLRVAVAMSGGVDSLRAAILLKEQGNDVFGVHMRHVPPSRTGRWCAGAMIREKEAFL 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                       ++ L    +           +  Q  N      P     FL+     A
Sbjct: 61  CELGLRFGFPIAVVDLRDAFESHVIEPFMEAYLLGQTPNPCIFCNPAVKFGFLMEK---A 117

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHD 149
             LG      G         P  R  
Sbjct: 118 RALGAERFATGHYARVSPPGPTSRRF 143


>gi|332883857|gb|EGK04137.1| argininosuccinate synthase [Dysgonomonas mossii DSM 22836]
          Length = 399

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 42/172 (24%), Gaps = 12/172 (6%)

Query: 7   KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L FSGG D S      + D    V T   + G     EL+       K+     
Sbjct: 1   MKKKVVLAFSGGLDTSFCAKYLSADLGYEVYTAIANTGGFTADELKVIEQKAYKLGAAKH 60

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                      + L I  +    S+   +   +  N      V    I   +     A  
Sbjct: 61  -----------VSLDITQEYYEKSIKYMIFGNVLRNGTYPISVSSERIFQAIAIINYAKE 109

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
           +G   +  G                + A    I       +      +   K
Sbjct: 110 IGADAVAHGSTGAGNDQVRFDLTFDVLAPGIEIITPTRDLLLTREYEINYLK 161


>gi|320540371|ref|ZP_08040021.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Serratia symbiotica str. Tucson]
 gi|320029302|gb|EFW11331.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Serratia symbiotica str. Tucson]
          Length = 366

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 37/139 (26%), Gaps = 6/139 (4%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +  +V  L     + +  E  C        
Sbjct: 1   MSD--NSQKKVIVGISGGVDSSVTAYLLQQQGYQVAGLFMKNWEEDDDEEYCSAAAD--- 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           +       D LG   +  +    +   +     +             +  + I F  F  
Sbjct: 56  LADAQAVCDKLG-IKLHTVNFAAEYWDNVFELFLEEYQAGRTPNPDILCNKEIKFKAFLE 114

Query: 121 TLAYRLGITNIVIGVCETD 139
             A  L    I  G     
Sbjct: 115 FAAEDLDADFIATGHYVRR 133


>gi|301774935|ref|XP_002922890.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1-like
           [Ailuropoda melanoleuca]
          Length = 477

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/107 (12%), Positives = 27/107 (25%), Gaps = 9/107 (8%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR--------NKVELECRLCVRKKIVE 62
            ++  SGG DS+        R  +V  +                  + E    V + +  
Sbjct: 65  VVVALSGGVDSAVAALLLRRRGYQVTGVFMKNWDSLDEHGVCIADRDCEDAYRVCQILDI 124

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
              +    + E      +          T N  +    +   + F  
Sbjct: 125 PFHQVS-YVKEYWNDVFSDFLSEYEKGRTPNPDIVCNKHIKFSCFFH 170


>gi|255690530|ref|ZP_05414205.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides finegoldii DSM 17565]
 gi|260623984|gb|EEX46855.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides finegoldii DSM 17565]
          Length = 361

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/172 (9%), Positives = 45/172 (26%), Gaps = 7/172 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + ++    L+  SGG DS+       ++   +  ++         E +    +  ++   
Sbjct: 1   MKERNKRVLVGMSGGIDSTATCLMLQEQGYEIVGVTMRVWGD---EPQDARELAARMGIE 57

Query: 64  MPKWKDSLGEDHILPLAIL----GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                + +     +    +       + +       +               + I     
Sbjct: 58  HYVADERIPFKETIVKNFIDEYKQGRTPNPCVMCNPLFKFRVLTEWADKLDCDWIATGHY 117

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
           + L  + G   I+ G  +     Y   R            LG  + + V   
Sbjct: 118 SRLEEKNGHIYIIAGDDDKKDQSYFLWRLGQDVLRRCIFPLGAYTKIKVREY 169


>gi|70731250|ref|YP_260991.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas fluorescens Pf-5]
 gi|123654441|sp|Q4K9U2|MNMA_PSEF5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|68345549|gb|AAY93155.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudomonas fluorescens Pf-5]
          Length = 377

 Score = 49.5 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 35/137 (25%), Gaps = 5/137 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +    ++  SGG DSS      +++  +VE L     + +     C       + +    
Sbjct: 10  QKKRVIVGMSGGVDSSVSALLLMEQGYQVEGLFMKNWEEDDGTEYC--TAMDDLADAQAV 67

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H        +   +     +A            +  R  I        A  L
Sbjct: 68  CDKIGIKLHT--ANFAAEYWDNVFEHFLAEYKAGRTPNPDILCNRE-IKFKAFLDYAMML 124

Query: 127 GITNIVIGVCETDYSGY 143
           G   I  G         
Sbjct: 125 GADLIATGHYVRRRDID 141


>gi|311896498|dbj|BAJ28906.1| putative GMP synthase [Kitasatospora setae KM-6054]
          Length = 528

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 55/183 (30%), Gaps = 14/183 (7%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             A+   SGG DS+   +       DR+  +  D+G   K E E          ++   +
Sbjct: 227 KRAICGLSGGVDSAVAAALVQRAIGDRLTCVYVDHGLMRKGETE----------QVEKDF 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             + G   ++  A    ++      +   K +        V  +    ++     A    
Sbjct: 277 VAATGVKLVVVDAEERFLTALKGVSDPEQKRKIIGREFIRVFEQAQADIIADEGPAVE-- 334

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   +               I++      L  +    +  PL  L K E   + Q++
Sbjct: 335 -FLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPEDLEFQLVEPLRKLFKDEVRMVGQEL 393

Query: 188 GGQ 190
           G  
Sbjct: 394 GLP 396


>gi|297623979|ref|YP_003705413.1| argininosuccinate synthase [Truepera radiovictrix DSM 17093]
 gi|297165159|gb|ADI14870.1| argininosuccinate synthase [Truepera radiovictrix DSM 17093]
          Length = 430

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 2/85 (2%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVR-KKIVE 62
           IKKA   +L +SGG D+S  L+W  +     V   + D GQ  +V       +R   +  
Sbjct: 18  IKKAQKVVLAYSGGLDTSVILAWLREVYGAEVVAFTADIGQGEEVAEAKEKALRTGAVQA 77

Query: 63  LMPKWKDSLGEDHILPLAILGDISH 87
                +    +D + P+   G +  
Sbjct: 78  YAVDLQREFVQDFVFPVLRSGALYE 102


>gi|262306029|gb|ACY45607.1| gln amidotransferase [Dinothrombium pandorae]
          Length = 196

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 23/65 (35%), Gaps = 2/65 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               L+L SGG DS+ C +      + D+V     D G   K E E        I   + 
Sbjct: 43  NNKVLMLVSGGVDSTVCAALLHKALKPDQVIAFHIDNGFMRKNESEKVEKSLNSIGLKLK 102

Query: 66  KWKDS 70
               S
Sbjct: 103 AVNAS 107


>gi|55821970|ref|YP_140412.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus thermophilus LMG
           18311]
 gi|55823887|ref|YP_142328.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus thermophilus
           CNRZ1066]
 gi|81558821|sp|Q5LXJ9|MNMA_STRT1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|81560008|sp|Q5M249|MNMA_STRT2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|55737955|gb|AAV61597.1| tRNA-(5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Streptococcus thermophilus LMG 18311]
 gi|55739872|gb|AAV63513.1| tRNA-(5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Streptococcus thermophilus CNRZ1066]
 gi|312279316|gb|ADQ63973.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase, contains the PP-loop ATPase domain
           [Streptococcus thermophilus ND03]
          Length = 373

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 48/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MTD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIDIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A  LG   +  G             H    A            L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYAQVVRDEDGIVHMLRGADNNKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  ++A+  G
Sbjct: 174 LQKPEVREIAERAG 187


>gi|82751221|ref|YP_416962.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus RF122]
 gi|123547857|sp|Q2YT57|MNMA_STAAB RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|82656752|emb|CAI81181.1| 5-methylaminomethyl-2-thiouridylate-methyltransferase tRNA
           [Staphylococcus aureus RF122]
          Length = 372

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 49/191 (25%), Gaps = 11/191 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  K    ++  SGG DSS       ++   V  +             C     +   ++
Sbjct: 1   MSNKDIRVVVGMSGGVDSSVTAHVLKEQGYDVIGIFMKNWDDTDENGVC--TATEDYNDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +          + +            +      + +    PN  V     I        A
Sbjct: 59  IEVCNQIGIPYYAVN---FEKEYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLDHA 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLKK 177
             LG   +  G     +                         L  +    V  P+  ++K
Sbjct: 116 MNLGADYVATGHYARIHRHEDGHVEMLRGVDNNKDQTYFLNQLSQQQLSKVMFPIGDIEK 175

Query: 178 YETWKLAQDIG 188
            E  ++A++ G
Sbjct: 176 SEVRRIAEEQG 186


>gi|283769417|ref|ZP_06342315.1| GMP synthase (glutamine-hydrolyzing) [Bulleidia extructa W1219]
 gi|283103942|gb|EFC05327.1| GMP synthase (glutamine-hydrolyzing) [Bulleidia extructa W1219]
          Length = 513

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 57/185 (30%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   LL  SGG DSS   +        ++  +  D+G   K E      V K   + M  
Sbjct: 215 SDKVLLALSGGVDSSVVAALLHKAIGSQLHCMFIDHGLLRKGE---AESVMKTFAKNMNI 271

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +          L  +   S  +     I +  +       + ++           +
Sbjct: 272 QLTKVDASKR----FLNKLKGVSDPEQKRKIIGNEFVYTFQDEVQKLL---------KGV 318

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  +  G   TD          TI++      L  + +  +  PL  L K E   L  +
Sbjct: 319 DIHWLAQGTLYTDVIESGTKTAQTIKSHHNVGGLPEDLNFKLIEPLNKLFKDEVRTLGIE 378

Query: 187 IGGQD 191
           +G  +
Sbjct: 379 LGLPE 383


>gi|212223802|ref|YP_002307038.1| Hypothetical ATPase [Thermococcus onnurineus NA1]
 gi|212008759|gb|ACJ16141.1| Hypothetical ATPase [Thermococcus onnurineus NA1]
          Length = 264

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 29/74 (39%), Gaps = 10/74 (13%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L+LFSGG+DSS  L    +    V  L+F +    +  L   +   KK+       
Sbjct: 20 EKRILVLFSGGKDSSLALYLLNEAGLNVSALTFFHRWSWRETLNWAMKFTKKLG------ 73

Query: 68 KDSLGEDHILPLAI 81
               E +++ +  
Sbjct: 74 ----VEHYLVDVTD 83


>gi|188997246|ref|YP_001931497.1| Argininosuccinate synthase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932313|gb|ACD66943.1| Argininosuccinate synthase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 399

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 1/82 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMP 65
               +L +SGG D+S  + W  DR   V T + D GQ  +  E+E +      +  ++ 
Sbjct: 1  MKKRVVLAYSGGLDTSVIVRWLTDRGFEVITYTADVGQGEELSEIEEKAKRAGAVKAIID 60

Query: 66 KWKDSLGEDHILPLAILGDISH 87
             +    D+ +PL   G +  
Sbjct: 61 DINEEFARDYCMPLMRAGALYE 82


>gi|118592068|ref|ZP_01549462.1| argininosuccinate synthase [Stappia aggregata IAM 12614]
 gi|118435364|gb|EAV42011.1| argininosuccinate synthase [Stappia aggregata IAM 12614]
          Length = 406

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 45/151 (29%), Gaps = 7/151 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L +SGG D+S  L W        V T + D GQ  ++E        +K  E++   
Sbjct: 7   KKVVLAYSGGLDTSIILKWLQTELGCEVVTFTADLGQGEELEP------ARKKAEMLGIK 60

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +  + +     +         +      + +   ++    +  R I         A   G
Sbjct: 61  EIYIDDLREEFIRDFVFPMFRANAVYEGVYLLGTSIARPLISKRLIEIAKETGADAIAHG 120

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAI 158
            T         + S Y       + A     
Sbjct: 121 ATGKGNDQVRFELSAYALNPDIKVIAPWRDW 151


>gi|56418789|ref|YP_146107.1| GMP synthase [Geobacillus kaustophilus HTA426]
 gi|261418575|ref|YP_003252257.1| GMP synthase [Geobacillus sp. Y412MC61]
 gi|319765390|ref|YP_004130891.1| GMP synthase, large subunit [Geobacillus sp. Y412MC52]
 gi|81348285|sp|Q5L3E1|GUAA_GEOKA RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|56378631|dbj|BAD74539.1| GMP synthetase (glutamine amidotransferase) [Geobacillus
           kaustophilus HTA426]
 gi|261375032|gb|ACX77775.1| GMP synthase, large subunit [Geobacillus sp. Y412MC61]
 gi|317110256|gb|ADU92748.1| GMP synthase, large subunit [Geobacillus sp. Y412MC52]
          Length = 510

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 55/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 216 KKVLCALSGGVDSSVAAVLVHRAIGDQLTCIFVDHGLLRKGE---AESVMKTFREQFQMN 272

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       LA L  ++     + +                 N    VF    A   G
Sbjct: 273 VIKVDAKDRF-LAKLKGVTDPEQKRKI---------------IGNEFIYVFDDEAAKLEG 316

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +V G   TD          TI++      L  +    +  PL  L K E   L   +
Sbjct: 317 IEFLVQGTLYTDIIESGTATAQTIKSHHNVGGLPEDMKFELIEPLNTLFKDEVRALGTQL 376

Query: 188 GGQDLV 193
           G  D +
Sbjct: 377 GIPDEI 382


>gi|323692955|ref|ZP_08107176.1| GMP synthase [Clostridium symbiosum WAL-14673]
 gi|323502956|gb|EGB18797.1| GMP synthase [Clostridium symbiosum WAL-14673]
          Length = 513

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 57/189 (30%), Gaps = 21/189 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +  AL   SGG DSS            ++  +  D+G   K E +    +          
Sbjct: 215 SGRALCALSGGVDSSVAAVMMAKAIGKQLTCVFVDHGLLRKNEGDEVEAI---------- 264

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G +    L  +   +     + +A      + P          F+      A ++
Sbjct: 265 ----FGPEGQYDLNFVRVNAQERFYEKLAGV----SDPEQKRKIIGEEFIRVFEEEAKKI 316

Query: 127 G-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLA 184
           G +  +V G    D       +   I++      L        +  PL  L K E  K  
Sbjct: 317 GKVDFLVQGTIYPDVIESGLGKSAVIKSHHNVGGLPEHVDFKEIIEPLRMLFKDEVRKAG 376

Query: 185 QDIGGQDLV 193
            ++G  + +
Sbjct: 377 LELGIPERL 385


>gi|255066218|ref|ZP_05318073.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria sicca ATCC 29256]
 gi|255049428|gb|EET44892.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria sicca ATCC 29256]
          Length = 367

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 48/189 (25%), Gaps = 10/189 (5%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           DI ++  + ++  SGG DSS   +       +V  +     + +  +  C +       +
Sbjct: 2   DITQQPSNIIVGLSGGVDSSVTAALLKQEGYQVRGVFMQNWEDDDNDEYCSIKQ-----D 56

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                  +      + +         ++      +      PN  V     I        
Sbjct: 57  SFDAIAVADIIGIDIDIVNFAAQYKDNVFAYFLKEYSAGRTPNPDVLCNAEIKFKCFLDY 116

Query: 123 AYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKK 177
           A   G   I  G                              L          PL  L+K
Sbjct: 117 AIEQGADTIATGHYARKEVRNGTHYLLKGLDQNKDQSYFLYRLKPFQLERAIFPLGDLEK 176

Query: 178 YETWKLAQD 186
            E  +LA +
Sbjct: 177 PEVRRLAAE 185


>gi|218134933|ref|ZP_03463737.1| hypothetical protein BACPEC_02838 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990318|gb|EEC56329.1| hypothetical protein BACPEC_02838 [Bacteroides pectinophilus ATCC
           43243]
          Length = 513

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 54/189 (28%), Gaps = 21/189 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   L   SGG DSS            ++  +  D+G   K E +    V          
Sbjct: 215 SGKVLCALSGGVDSSVAAVLLAKAVGKQLTCVFVDHGLLRKDEGDEVEAV---------- 264

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G D    L  +   +     + +    +               F+      A ++
Sbjct: 265 ----FGPDGPYDLNFIRVNAQERFYEKLKGVEEPERKRKII----GEEFIRVFEEEAKKI 316

Query: 127 GI-TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLA 184
           G    +V G    D       +  TI++      L        +  PL  L K E  +  
Sbjct: 317 GAVDYLVQGTIYPDVIESGLGKSATIKSHHNVGGLPDYVDFKEIVEPLRDLFKDEVRRAG 376

Query: 185 QDIGGQDLV 193
            ++G  + +
Sbjct: 377 LELGIPEYL 385


>gi|160890666|ref|ZP_02071669.1| hypothetical protein BACUNI_03111 [Bacteroides uniformis ATCC 8492]
 gi|270295763|ref|ZP_06201963.1| tRNA methyl transferase [Bacteroides sp. D20]
 gi|317479803|ref|ZP_07938923.1| tRNA methyl transferase [Bacteroides sp. 4_1_36]
 gi|156859665|gb|EDO53096.1| hypothetical protein BACUNI_03111 [Bacteroides uniformis ATCC 8492]
 gi|270273167|gb|EFA19029.1| tRNA methyl transferase [Bacteroides sp. D20]
 gi|316904009|gb|EFV25843.1| tRNA methyl transferase [Bacteroides sp. 4_1_36]
          Length = 364

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/120 (10%), Positives = 28/120 (23%), Gaps = 10/120 (8%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + K     L+  SGG DS+       ++   +  L+         E      +   +   
Sbjct: 1   MNKPGKRVLVGMSGGIDSTATCLMLREQGYEIIGLTMWVWGD---EPVEARSLADSMGIE 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                +      I+    + +                  + N     R +         A
Sbjct: 58  HYVADERDAFRRIIVRNFIDEYRRGRTPNP-------CVMCNPLFKFRILTEWADRLGCA 110


>gi|161899032|ref|YP_315607.2| argininosuccinate synthase [Thiobacillus denitrificans ATCC 25259]
 gi|119361341|sp|Q3SHT1|ASSY_THIDA RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
          Length = 409

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 51/157 (32%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  ++E   R    +  ++ 
Sbjct: 1   MSDIKKVVLAYSGGLDTSVILKWLQDTYQCEVVTFTADLGQGEELEP-ARQKALQFGIKP 59

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + D L E+ +            + T      +   ++    +  R I  +      A
Sbjct: 60  EQIYIDDLREEFVRDFVF---PMFRANTVYEGEYLLGTSIARPLIAKRLIEIVNATGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         +   Y       + A     +L
Sbjct: 117 ICHGATGKGNDQVRFELGAYALKPDVKVIAPWREWDL 153


>gi|68536405|ref|YP_251110.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Corynebacterium jeikeium K411]
 gi|123650729|sp|Q4JUL5|MNMA_CORJK RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|68264004|emb|CAI37492.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Corynebacterium jeikeium K411]
          Length = 395

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 57/209 (27%), Gaps = 6/209 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK-KIVELMPKWK 68
             +   SGG DS+   S AL+    V  +     Q  +            +      +  
Sbjct: 2   RVVAAMSGGVDSAVAASRALEAGHEVIGVHLALSQSPEAVRAGSRGCCSLEDSADARRVA 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D LG    +      D   + +  +          PN  +     I        +  LG 
Sbjct: 62  DKLGIPFYVW--DFSDRFKADVIDDFVDSYAIGETPNPCLRCNEKIKFEALLDRSIALGF 119

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK-KYETWKLAQDI 187
             +V G     + G      D  +     + +  +  +      +    K E  + A+D 
Sbjct: 120 DAVVTGHYARLHDGVMRRGVDANKDQSYVLGVLTDEQLAHCMFPVGDTIKPEIREEAKDH 179

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGY 216
           G          +   C++     +   G 
Sbjct: 180 GFGVASKPDSHDI--CFIPDGQTQAFLGK 206


>gi|53804566|ref|YP_113570.1| argininosuccinate synthase [Methylococcus capsulatus str. Bath]
 gi|68566238|sp|Q609X7|ASSY_METCA RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|53758327|gb|AAU92618.1| argininosuccinate synthase [Methylococcus capsulatus str. Bath]
          Length = 408

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 43/172 (25%), Gaps = 7/172 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
                  L +SGG D+S  L W  +     V T + D GQ  +VE          + E+ 
Sbjct: 4   SNVKKVALAYSGGLDTSVILKWLQETYGCEVVTFTADLGQGEEVEPARAKAQAMGVKEI- 62

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 + +               +        +   ++    +  R I         A 
Sbjct: 63  -----YIDDLREEFSRDFVFPMFRANAIYEGEYLLGTSIARPLIAKRLIEIANETGADAI 117

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
             G T         +   Y       + A      L     +  +     + 
Sbjct: 118 AHGATGKGNDQVRFELGAYALRPDIRVIAPWREWELTSRETLLAYAESRGIP 169


>gi|327463811|gb|EGF10127.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus sanguinis SK1057]
          Length = 373

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 49/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYALTLGADYVATGHYAQVKRDKDGLVHMLRGKDNNKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E   +A+  G
Sbjct: 174 LEKTEVRAIAERAG 187


>gi|262305997|gb|ACY45591.1| gln amidotransferase [Acanthocyclops vernalis]
          Length = 197

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 2/64 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              L+L SGG DS+ C +        DRV  +  D G   K E +       ++   +  
Sbjct: 44  NKVLMLLSGGVDSTVCAALMNRALGVDRVLAIHIDNGFMRKGESDQVRDSLARLGLDVKV 103

Query: 67  WKDS 70
            + S
Sbjct: 104 IRAS 107


>gi|32261063|emb|CAE00214.1| WbpG protein [Rhizobium leguminosarum bv. viciae 3841]
          Length = 386

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 36/112 (32%), Gaps = 1/112 (0%)

Query: 11  ALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A++  SGG DS+      A     R+  +  D G  ++  +     + +K+   +  +  
Sbjct: 70  AMVGLSGGIDSAFLAHLAARKHGLRLLAVHVDGGWNSEPAVHNIEILVRKLDLDLHTYVI 129

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
              E   L +A +     +                      R+ +  V  A+
Sbjct: 130 EWQEMRDLQIAFMKASVLNQDIPQDHAFFSTLYRTAAKFGIRHFLSGVNFAS 181


>gi|303255169|ref|ZP_07341245.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae BS455]
 gi|303259175|ref|ZP_07345153.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae SP-BS293]
 gi|303263258|ref|ZP_07349181.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae BS397]
 gi|303265423|ref|ZP_07351323.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae BS457]
 gi|302597999|gb|EFL65069.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae BS455]
 gi|302639593|gb|EFL70050.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae SP-BS293]
 gi|302644863|gb|EFL75110.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae BS457]
 gi|302647031|gb|EFL77255.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae BS397]
          Length = 373

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 52/194 (26%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            + +    + +    PN  V     I      
Sbjct: 57  KDVVAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYAITLGADYVATGHYARVARDEDGTVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  KLA++ G
Sbjct: 174 LEKPEVRKLAEEAG 187


>gi|229918430|ref|YP_002887076.1| tRNA-specific 2-thiouridylase MnmA [Exiguobacterium sp. AT1b]
 gi|229469859|gb|ACQ71631.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Exiguobacterium sp. AT1b]
          Length = 373

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/196 (12%), Positives = 55/196 (28%), Gaps = 14/196 (7%)

Query: 1   MNDIIKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVR 57
           MN   K     + ++  SGG DSS       ++   V  +   ++   ++  +       
Sbjct: 1   MNLRTKAPEETTVVVGMSGGVDSSVTAHVLKEQGYNVIGIFMKNWDDTDENGVCTATEDY 60

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           + ++ +  +                       + +    + +    PN  V     I   
Sbjct: 61  EDVIAVANQIGIPYYA------VNFEKEYWDRVFEYFLAEYRLGRTPNPDVMCNKEIKFK 114

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA-----INLGMESHVTVHTPL 172
                A RLG   +  G          + R    +            L  +       P+
Sbjct: 115 AFLDHALRLGADFVATGHYAQVKYVDGEHRLLRGKDDNKDQTYFLNQLSQDQLARTMFPI 174

Query: 173 MWLKKYETWKLAQDIG 188
             + K +   +A++ G
Sbjct: 175 GHMDKKDVRAIAEEAG 190


>gi|255692219|ref|ZP_05415894.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides finegoldii DSM 17565]
 gi|260622083|gb|EEX44954.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides finegoldii DSM 17565]
          Length = 355

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 51/181 (28%), Gaps = 7/181 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
            L SGG DSS  +    ++  +        G      ++C     ++ +EL        G
Sbjct: 5   ALLSGGVDSSVVVHLLCEQGYKPTLFYIKIGMEGAEYMDCS---AEEDIELSAATARKYG 61

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
               + +    +   +  T  +    Q        +  + I F  F   +      T   
Sbjct: 62  LSLEI-VDFHKEYWENVATYAIGKIRQGLTPNPDVMCNKLIKFGCFEQRIGKEFDFTATG 120

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLAQDIGG 189
                    G            +    L    ++ +     P+  L K+E  ++A   G 
Sbjct: 121 HYATTIQRDGKVWLGTAKDPVKDQTDFLAQIDYLQISKLMFPIGGLTKHEVREIADAAGL 180

Query: 190 Q 190
            
Sbjct: 181 P 181


>gi|221141109|ref|ZP_03565602.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus str. JKD6009]
          Length = 364

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 49/191 (25%), Gaps = 11/191 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  K    ++  SGG DSS       ++   V  +             C     +   ++
Sbjct: 1   MSNKDIRVVVGMSGGVDSSVTAHVLKEQGYDVIGIFMKNWDDTDENGVC--TATEDYNDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +          + +            +      + +    PN  V     I        A
Sbjct: 59  IEVCNQIGIPYYAVN---FEKEYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLDHA 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLKK 177
             LG   +  G     +                         L  +    V  P+  ++K
Sbjct: 116 MNLGADYVATGHYARIHRHEDGHVEMLRGVDNNKDQTYFLNQLSQQQLSKVMFPIGDIEK 175

Query: 178 YETWKLAQDIG 188
            E  ++A++ G
Sbjct: 176 SEVRRIAEEQG 186


>gi|32473865|ref|NP_866859.1| ATP-utilizing enzyme [Rhodopirellula baltica SH 1]
 gi|32444401|emb|CAD74400.1| conserved hypothetical protein-putative ATP-utilizing enzyme
          [Rhodopirellula baltica SH 1]
          Length = 316

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 22/50 (44%)

Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
          ++ FSGG DSS   + A      V  ++       + +L+    V +++ 
Sbjct: 32 VVAFSGGVDSSVVAAAAHRTGRDVVAVTAQSPAVARWQLDWARRVAEQVG 81


>gi|313673848|ref|YP_004051959.1| hypothetical protein Calni_1892 [Calditerrivibrio nitroreducens
          DSM 19672]
 gi|312940604|gb|ADR19796.1| hypothetical protein Calni_1892 [Calditerrivibrio nitroreducens
          DSM 19672]
          Length = 233

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 26/63 (41%), Gaps = 2/63 (3%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRK 58
          M +   +  SA++  SGG DSS  L  A       ++  ++       + E+     + +
Sbjct: 1  MKEYFSRFKSAVVALSGGADSSFTLYLASKYIESKQIVAVTATNSHVFRYEINQARSIAE 60

Query: 59 KIV 61
          ++ 
Sbjct: 61 RLN 63


>gi|315038064|ref|YP_004031632.1| tRNA-specific 2-thiouridylase MnmA [Lactobacillus amylovorus GRL
           1112]
 gi|325956515|ref|YP_004291927.1| tRNA-specific 2-thiouridylase MnmA [Lactobacillus acidophilus 30SC]
 gi|312276197|gb|ADQ58837.1| tRNA-specific 2-thiouridylase MnmA [Lactobacillus amylovorus GRL
           1112]
 gi|325333080|gb|ADZ06988.1| tRNA-specific 2-thiouridylase MnmA [Lactobacillus acidophilus 30SC]
 gi|327183344|gb|AEA31791.1| tRNA-specific 2-thiouridylase MnmA [Lactobacillus amylovorus GRL
           1118]
          Length = 375

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 47/192 (24%), Gaps = 12/192 (6%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           ++  +    ++  SGG DSS        +   V  +             C     +   +
Sbjct: 1   MVDNSKIRVVVGMSGGVDSSVSALLLKQQGYDVVGVFMKNWDDTDDAGVC--TATEDYED 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +           + +            + +    + +    PN  V   + I        
Sbjct: 59  VKKVADKIGIPYYSIN---FEKEYWHRVFEYFLNEYKKGRTPNPDVMCNSQIKFKSFLEF 115

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTI------RAIETAINLGMESHVTVHTPLMWLK 176
           A  L    I +G             H                 L  +    V  PL  L 
Sbjct: 116 AMDLDADYIAMGHYAKTVKDANGVTHMMRPKDGNKDQTYFLSQLNQDQIKKVIFPLANLT 175

Query: 177 KYETWKLAQDIG 188
           K +  ++A   G
Sbjct: 176 KPQVREIALANG 187


>gi|291461244|ref|ZP_06027845.2| ThiI family protein [Fusobacterium periodonticum ATCC 33693]
 gi|291378101|gb|EFE85619.1| ThiI family protein [Fusobacterium periodonticum ATCC 33693]
          Length = 337

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 8/86 (9%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVE---TLSFDYGQRNKVELECRLCVR 57
          M D+ K+   AL LFSGG DS+  +    D+   V     +S  +G +     E    + 
Sbjct: 1  MKDL-KEKIKALALFSGGLDSALAIKVVQDQGVEVIGLNFVSHFFGGK----NEKAEKMA 55

Query: 58 KKIVELMPKWKDSLGEDHILPLAILG 83
          +++   +           ++   + G
Sbjct: 56 EQLGIKLEYIDFKKRHMFVVEDPVYG 81


>gi|220935618|ref|YP_002514517.1| Argininosuccinate synthase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996928|gb|ACL73530.1| Argininosuccinate synthase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 404

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 48/174 (27%), Gaps = 7/174 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +       +L +SGG D+S  L W  D     V T + D GQ  ++E          + E
Sbjct: 1   MASGVKKVVLAYSGGLDTSVILKWLEDTYGCEVVTFTADIGQGEELEPARTKAQAMGVKE 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +       + +     +         + T      +   ++    +  R I         
Sbjct: 61  I------YIDDLREEFVRDFVFPMFRANTLYEGEYLLGTSIARPLIAKRLIEIANETGAD 114

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
           A   G T         +   Y       + A     +L     +  +     + 
Sbjct: 115 AISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLNSREKLLAYAEQHGIP 168


>gi|168483769|ref|ZP_02708721.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae CDC1873-00]
 gi|172042905|gb|EDT50951.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae CDC1873-00]
 gi|332203292|gb|EGJ17359.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae GA47368]
          Length = 373

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 50/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            + +    + +    PN  V     I      
Sbjct: 57  KDVVAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMW 174
             A  LG   +  G             H                 L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYARVVRDEDGTVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           LKK E  KLA++ G
Sbjct: 174 LKKPEVRKLAEEAG 187


>gi|167749316|ref|ZP_02421443.1| hypothetical protein EUBSIR_00268 [Eubacterium siraeum DSM 15702]
 gi|167657707|gb|EDS01837.1| hypothetical protein EUBSIR_00268 [Eubacterium siraeum DSM 15702]
          Length = 387

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 48/191 (25%), Gaps = 10/191 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            A    +  SGG DSS  L    D+   V   +         +          I +    
Sbjct: 29  MAEKLAIAMSGGVDSSVALVLLKDK-YEVSGYTLKLHDSRGTDDSGLCGSASDIEDAKAI 87

Query: 67  WKDSLGEDHILPLAILG---------DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
                   ++L +  L              S  T N  ++  +       +       + 
Sbjct: 88  AAKFGVPHYLLDMRDLFSDTVQKSFVQSYLSGRTPNPCVECNETIKFGALLDAVKKQGIN 147

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
             AT  Y     +   G      +   D   +          L  +       PL  + K
Sbjct: 148 HIATGHYVRSCYDEKSGRWLLKKAINADGTSNAKDQSYVLYRLSQQQLAASVFPLGEMTK 207

Query: 178 YETWKLAQDIG 188
            E   +A D G
Sbjct: 208 DEIRHIAADSG 218


>gi|94987098|ref|YP_595031.1| argininosuccinate synthase [Lawsonia intracellularis PHE/MN1-00]
 gi|119361284|sp|Q1MQL7|ASSY_LAWIP RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|94731347|emb|CAJ54710.1| Argininosuccinate synthase [Lawsonia intracellularis PHE/MN1-00]
          Length = 397

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 1/54 (1%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCV 56
          +  +    +L +SGG D+S  L W +  +   V  ++ D GQ           +
Sbjct: 1  MSNRIKKVVLAYSGGLDTSVILKWLIATYNCEVIAVTADLGQNENFHDIEEKAI 54


>gi|58616948|ref|YP_196147.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ehrlichia ruminantium str. Gardel]
 gi|75432674|sp|Q5FFJ0|MNMA_EHRRG RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|58416560|emb|CAI27673.1| Probable tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ehrlichia ruminantium str. Gardel]
          Length = 370

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 50/194 (25%), Gaps = 14/194 (7%)

Query: 3   DIIKKAP-----SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCV 56
           D++ K       +A++  SGG DSS   +       +V  ++   Y        +   C 
Sbjct: 8   DLLVKNKPPTSTTAVVAMSGGVDSSVAAALLHKLGYKVIGITLQLYNNNKNSNTKGACCG 67

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
                +            + L       +    + ++          P   +    +I  
Sbjct: 68  SLDTKDAKQVASSMGFPHYTLN---YEKVFREEVIEDFIDTYTQGKTPIPCIKCNQVIKF 124

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTP 171
                    LG   +V G          D                     +E    +  P
Sbjct: 125 RDLLNATKSLGADVLVTGHYIRKIEQDDDIYVYSSKDTKKDQSYFLFATTVEQLRLLRFP 184

Query: 172 LMWLKKYETWKLAQ 185
           L    K +  KLA+
Sbjct: 185 LGNFHKEDIRKLAK 198


>gi|28806117|dbj|BAC59393.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Vibrio parahaemolyticus RIMD 2210633]
          Length = 362

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 48/181 (26%), Gaps = 11/181 (6%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS        +  +VE L     + +  E  C     + + +            
Sbjct: 1   MSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYC--TAAEDLADAQAVCDKLGIHL 58

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
           H +      +   +     +A            +  + I F  F       L    I +G
Sbjct: 59  HTIN--FAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEFADEVLEADYIAMG 116

Query: 135 VCETDYSGYPDCRHDT-------IRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                       +                   L  E       P+  L+K E  ++A++ 
Sbjct: 117 HYVRRSFPENGEKPQMLRGLDSNKDQSYFLYTLSHEQVARSLFPVGDLEKPEVRRIAEEQ 176

Query: 188 G 188
           G
Sbjct: 177 G 177


>gi|326391022|ref|ZP_08212571.1| NAD+ synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325992967|gb|EGD51410.1| NAD+ synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 543

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/193 (9%), Positives = 49/193 (25%), Gaps = 2/193 (1%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             A++  SGG DS+   + A++    + V  +S      ++        + + +      
Sbjct: 288 KKAVVGLSGGIDSAVVCAIAVEALGKENVLAVSMPSRYSSEGSKTDARILAENLGVEFRV 347

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     L +    +     L +         N           I L         +
Sbjct: 348 IPIEPVFKSYLSVFNGDNSVIGDLAEENIQARIRGNYLMFISNREGHIVLTTGNKSELAM 407

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   +   +  +        +                  +++   +   +     K    
Sbjct: 408 GYCTLYGDMSGSLAPIADVPKTMVYELARYINREREIIPISIIEKVPSAELRPNQKDEDS 467

Query: 187 IGGQDLVNLILEE 199
           +    +++ IL+ 
Sbjct: 468 LPPYKILDEILKM 480


>gi|325662746|ref|ZP_08151340.1| GMP synthase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|331086471|ref|ZP_08335550.1| GMP synthase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|325470983|gb|EGC74211.1| GMP synthase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|330410529|gb|EGG89957.1| GMP synthase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 514

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 50/190 (26%), Gaps = 22/190 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS           +++  +  D+G   K E +    V          
Sbjct: 215 NGKVLCALSGGVDSSVAAVMLSKAVGEQLTCVFVDHGLLRKNEGDEVEAV---------- 264

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G +    L  +   +     + +    +  +            F+      A ++
Sbjct: 265 ----FGPEGNYDLNFIRVNAQERFYEKLKGVEEPESKRKII----GEEFIRVFEEEAKKI 316

Query: 127 GITNIV---IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           G  + +       +   SG                         +  PL  L K E  K 
Sbjct: 317 GAVDFLVQGTIYPDVVESGLGGESAVIKSHHNVGGLPEYVDFKEIIEPLRDLFKDEVRKA 376

Query: 184 AQDIGGQDLV 193
             ++G  + +
Sbjct: 377 GLELGIPEYL 386


>gi|317122065|ref|YP_004102068.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermaerobacter marianensis DSM 12885]
 gi|315592045|gb|ADU51341.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermaerobacter marianensis DSM 12885]
          Length = 405

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 55/190 (28%), Gaps = 11/190 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI--VELMP 65
               L   SGG DSS   +   D    V  ++         E E R      +  ++   
Sbjct: 6   KGRVLAAMSGGVDSSVMAALLRDEGYEVIGVTMQTWPAMAAEDEARYGGCCSLSAIDDAR 65

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +  + LG  + +    +       +      +      PN  +     I        A  
Sbjct: 66  RVAERLGIPYYVM--NMRQDFEEKVIDYFVEEYLRGRTPNPCIACNRYIKFDEFLRRAQA 123

Query: 126 LGITNI----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW---LKKY 178
           LG   +       V   D +G    R    R  +    L   +   +   L+     +K 
Sbjct: 124 LGCDYVATGHYAIVEYDDAAGRFVLRKSADRRKDQTYVLYNFTQEQLARTLLPIGRFEKS 183

Query: 179 ETWKLAQDIG 188
           E  +LA+  G
Sbjct: 184 EVRRLAEAYG 193


>gi|307265807|ref|ZP_07547358.1| NAD+ synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919202|gb|EFN49425.1| NAD+ synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 543

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/193 (9%), Positives = 49/193 (25%), Gaps = 2/193 (1%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             A++  SGG DS+   + A++    + V  +S      ++        + + +      
Sbjct: 288 KKAVVGLSGGIDSAVVCAIAVEALGKENVLAVSMPSRYSSEGSKTDARILAENLGVEFRV 347

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     L +    +     L +         N           I L         +
Sbjct: 348 IPIEPVFKSYLSVFNGDNSVIGDLAEENIQARIRGNYLMFISNREGHIVLTTGNKSELAM 407

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   +   +  +        +                  +++   +   +     K    
Sbjct: 408 GYCTLYGDMSGSLAPIADVPKTMVYELARYINREREIIPISIIEKVPSAELRPNQKDEDS 467

Query: 187 IGGQDLVNLILEE 199
           +    +++ IL+ 
Sbjct: 468 LPPYKILDEILKM 480


>gi|295675544|ref|YP_003604068.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia sp. CCGE1002]
 gi|295435387|gb|ADG14557.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia sp. CCGE1002]
          Length = 420

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 33/139 (23%), Gaps = 6/139 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K    ++  SGG DSS       ++   V  L     + +     C         + +
Sbjct: 1   MSKR-KVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDSEYCSTRQ-----DWI 54

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                +      +            +      +      PN  V     I        A 
Sbjct: 55  DVVSVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAM 114

Query: 125 RLGITNIVIGVCETDYSGY 143
            LG   I  G        +
Sbjct: 115 SLGAETIATGHYARVRQNH 133


>gi|255038169|ref|YP_003088790.1| Argininosuccinate synthase [Dyadobacter fermentans DSM 18053]
 gi|254950925|gb|ACT95625.1| Argininosuccinate synthase [Dyadobacter fermentans DSM 18053]
          Length = 400

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 22/59 (37%), Gaps = 1/59 (1%)

Query: 8  APSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           P  +L FSGG D S      A DR   V ++  D G  +  EL+        +     
Sbjct: 3  QPKVVLAFSGGLDTSFCVKYLAEDRGYEVYSVLVDTGGFSDEELKTIEANAYALGVKQH 61


>gi|145352290|ref|XP_001420484.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580718|gb|ABO98777.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 394

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 47/182 (25%), Gaps = 8/182 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVET----LSFDYGQRN---KVELECRLCVRKK 59
           K     +L SGG DSS  L+               + F    RN   +   E  L V + 
Sbjct: 5   KPLRVAVLLSGGVDSSVALALLRAAGHECVAFYLQIWFQEDFRNTWDQCPWEEDLRVAES 64

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           + E +    +++         ++ D                 N    F   R  +     
Sbjct: 65  VCERVGVPLETVPLTDEYWNLVVKDSVEEIRKGRTPNPDVLCNSRVKFGAFREWLARTHP 124

Query: 120 -ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
                   G    V      + +                 +L  E   +V  P+  + K 
Sbjct: 125 GEFDRVASGHYAAVERADVGELARLVMSGDTFKDQTYFLADLSQEQLGSVCFPVGGMPKA 184

Query: 179 ET 180
           E 
Sbjct: 185 EI 186


>gi|332971611|gb|EGK10561.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Kingella kingae ATCC 23330]
          Length = 363

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 50/187 (26%), Gaps = 10/187 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + +  + ++  SGG DSS   +        V  +     + +  +  C +       + +
Sbjct: 1   MHENQNIIVGLSGGVDSSVTAALLKQAGANVRGVFMQNWEDDNNDEYCSIKQ-----DSL 55

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                +      + +          +      + Q    PN  V     I        A 
Sbjct: 56  DAMAVADIVGIDIDIVNFAAQYKDKVFAYFLQEYQAGRTPNPDVLCNAEIKFKCFLDYAI 115

Query: 125 RLGITNIV--IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH---TPLMWLKKYE 179
             G   I       +    G            + +  L       +     PL  L+K E
Sbjct: 116 EQGAEAIATGHYARKQVRDGVHYLLRGLDNNKDQSYFLYRLQPFQLEKALFPLGHLEKPE 175

Query: 180 TWKLAQD 186
             +LA +
Sbjct: 176 VRRLATE 182


>gi|331089846|ref|ZP_08338739.1| GMP synthase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|330403543|gb|EGG83101.1| GMP synthase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 515

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 49/188 (26%), Gaps = 22/188 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS            ++  +  D+G            +RK   + +    
Sbjct: 218 KVLCALSGGVDSSVAAVMLSKAIGKQLTCVFVDHG-----------LLRKDEGDEVEAVF 266

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G   +  + +       +  K V    +               F+      A ++G 
Sbjct: 267 GPEGPYDLNFIRVNAQERFYAKLKGVEEPEEK-------RKIIGEEFIRVFEEEAKKIGA 319

Query: 129 TNIV---IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            + +       +   SG                         +  PL  L K E  K   
Sbjct: 320 VDFLVQGTIYPDVVESGLGGESAVIKSHHNVGGLPDYVDFKEIIEPLRDLFKDEVRKAGL 379

Query: 186 DIGGQDLV 193
           ++G  + +
Sbjct: 380 ELGIPEYL 387


>gi|317500678|ref|ZP_07958896.1| GMP synthase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|316897872|gb|EFV19925.1| GMP synthase [Lachnospiraceae bacterium 8_1_57FAA]
          Length = 545

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 49/188 (26%), Gaps = 22/188 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS            ++  +  D+G            +RK   + +    
Sbjct: 248 KVLCALSGGVDSSVAAVMLSKAIGKQLTCVFVDHG-----------LLRKDEGDEVEAVF 296

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G   +  + +       +  K V    +               F+      A ++G 
Sbjct: 297 GPEGPYDLNFIRVNAQERFYAKLKGVEEPEEK-------RKIIGEEFIRVFEEEAKKIGA 349

Query: 129 TNIV---IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            + +       +   SG                         +  PL  L K E  K   
Sbjct: 350 VDFLVQGTIYPDVVESGLGGESAVIKSHHNVGGLPDYVDFKEIIEPLRDLFKDEVRKAGL 409

Query: 186 DIGGQDLV 193
           ++G  + +
Sbjct: 410 ELGIPEYL 417


>gi|262306055|gb|ACY45620.1| gln amidotransferase [Idiogaryops pumilis]
          Length = 196

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              L+L SGG DS+ C +      R D+V  +  D G   K E +       ++V  +  
Sbjct: 44  NKVLMLLSGGVDSTVCTALLGSALRKDQVIAIHIDNGFMRKNESKLVEKSLSEVVGQLHV 103

Query: 67  WKDSL 71
              ++
Sbjct: 104 INAAI 108


>gi|153815912|ref|ZP_01968580.1| hypothetical protein RUMTOR_02157 [Ruminococcus torques ATCC 27756]
 gi|145846731|gb|EDK23649.1| hypothetical protein RUMTOR_02157 [Ruminococcus torques ATCC 27756]
          Length = 471

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 49/188 (26%), Gaps = 22/188 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS            ++  +  D+G            +RK   + +    
Sbjct: 174 KVLCALSGGVDSSVAAVMLSKAIGKQLTCVFVDHG-----------LLRKDEGDEVEAVF 222

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G   +  + +       +  K V    +               F+      A ++G 
Sbjct: 223 GPEGPYDLNFIRVNAQERFYAKLKGVEEPEEK-------RKIIGEEFIRVFEEEAKKIGA 275

Query: 129 TNIV---IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            + +       +   SG                         +  PL  L K E  K   
Sbjct: 276 VDFLVQGTIYPDVVESGLGGESAVIKSHHNVGGLPDYVDFKEIIEPLRDLFKDEVRKAGL 335

Query: 186 DIGGQDLV 193
           ++G  + +
Sbjct: 336 ELGIPEYL 343


>gi|14195277|sp|Q9JTJ9|MNMA_NEIMA RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 367

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 46/191 (24%), Gaps = 11/191 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN     +   ++  SGG DSS   +    +  +V  +     + +  +  C +      
Sbjct: 1   MNTTANPSN-IIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWEDDDNDEYCSIKQ---- 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +       +      + +          +      +      PN  V     I      
Sbjct: 56  -DSFDAIAVADIVGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLCNAEIKFKCFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A   G   I  G                              L          PL  L
Sbjct: 115 DYAVGQGADTIATGHYARKEVRNGVHYLLKGLDQNKDQSYFLYRLKPFQLERAIFPLGGL 174

Query: 176 KKYETWKLAQD 186
           +K E  +LA +
Sbjct: 175 EKPEVRRLAAE 185


>gi|313149619|ref|ZP_07811812.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313138386|gb|EFR55746.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 362

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/192 (9%), Positives = 50/192 (26%), Gaps = 20/192 (10%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +     L+  SGG DS+       ++   +  ++         E +    +  ++   
Sbjct: 1   MKESNKRVLVGMSGGIDSTATCLMLQEQGYEIVGVTMRVWGD---EPQDARELAVRMGIE 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                + +     +    +              + +    PN  V    +         A
Sbjct: 58  HYVADERVPFKDTIVKNFI-------------DEYRQGRTPNPCVMCNPLFKFRMLIEWA 104

Query: 124 YRLGITNI----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            +LG   I       + E +   Y     D  +     +    +  +      +     +
Sbjct: 105 DKLGCDWIATGHYSRLEERNGYIYIVAGDDEKKDQSYFLWRLGQDVLRRCIFPLGNYTKQ 164

Query: 180 TWKLAQDIGGQD 191
           T +      G +
Sbjct: 165 TVRDYLREKGYE 176


>gi|222053549|ref|YP_002535911.1| thiamine biosynthesis protein [Geobacter sp. FRC-32]
 gi|221562838|gb|ACM18810.1| thiamine biosynthesis protein [Geobacter sp. FRC-32]
          Length = 335

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
              AL L SGG DS+  +   LD+   VE L+F
Sbjct: 1  MQKKALALLSGGLDSTLAVKVMLDQGIAVEALNF 34


>gi|92114562|ref|YP_574490.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chromohalobacter salexigens DSM 3043]
 gi|122419524|sp|Q1QUR7|MNMA_CHRSD RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|91797652|gb|ABE59791.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chromohalobacter salexigens DSM 3043]
          Length = 384

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 49/184 (26%), Gaps = 10/184 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS      L++   VE L       +     C    ++ + +       
Sbjct: 17  KVIVGMSGGVDSSVTALTLLEQGYAVEGLFMKNWDEDDGTEYC--TAKEDLADAQAVCDT 74

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                H        +   +     +A            +  R  I        A  LG  
Sbjct: 75  LGITLHT--ANFAAEYWDNVFEHFLAEYKAGRTPNPDILCNRE-IKFKVFLEYAEMLGAE 131

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV-----HTPLMWLKKYETWKLA 184
            I  G           CR           +  + +   V       P+  ++K E   +A
Sbjct: 132 KIATGHYVRQGWRDGHCRLLKGLDANKDQSYFLHAVPEVAIARTLFPVGEMEKSEVRAIA 191

Query: 185 QDIG 188
           +  G
Sbjct: 192 ERHG 195


>gi|15900060|ref|NP_344664.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pneumoniae TIGR4]
 gi|111656982|ref|ZP_01407790.1| hypothetical protein SpneT_02001784 [Streptococcus pneumoniae
           TIGR4]
 gi|225860166|ref|YP_002741675.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298229174|ref|ZP_06962855.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pneumoniae str.
           Canada MDR_19F]
 gi|298255779|ref|ZP_06979365.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pneumoniae str.
           Canada MDR_19A]
 gi|298501928|ref|YP_003723868.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae TCH8431/19A]
 gi|24638327|sp|Q97T38|MNMA_STRPN RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|254811468|sp|C1CP03|MNMA_STRZT RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|14971585|gb|AAK74304.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae TIGR4]
 gi|225726555|gb|ACO22406.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae Taiwan19F-14]
 gi|298237523|gb|ADI68654.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae TCH8431/19A]
 gi|327390539|gb|EGE88879.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae GA04375]
          Length = 373

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 52/194 (26%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            + +    + +    PN  V     I      
Sbjct: 57  KDVVAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYAITLGADYVATGHYARVARDEDGTVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  +LA++ G
Sbjct: 174 LEKPEVRRLAEEAG 187


>gi|223044127|ref|ZP_03614166.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus capitis SK14]
 gi|314933788|ref|ZP_07841153.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus caprae C87]
 gi|222442521|gb|EEE48627.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus capitis SK14]
 gi|313653938|gb|EFS17695.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus caprae C87]
          Length = 372

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 49/189 (25%), Gaps = 11/189 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  K    ++  SGG DSS       ++   V  +             C     +   ++
Sbjct: 1   MSNKDIRVVVGMSGGVDSSVTAHLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDYNDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +          + +      +     +      + +    PN  V     I        A
Sbjct: 59  IAVCNQIGIPYYAVN---FEEEYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLEHA 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLKK 177
            +LG   +  G                               L  E    V  P+  ++K
Sbjct: 116 LKLGADYVATGHYARIRRHEDGHVEMLRGVDNNKDQTYFLNQLSQEQLSKVMFPIGDIEK 175

Query: 178 YETWKLAQD 186
            E  ++A++
Sbjct: 176 SEVRRIAEE 184


>gi|258508299|ref|YP_003171050.1| tRNA-specific 2-thiouridylase MnmA [Lactobacillus rhamnosus GG]
 gi|257148226|emb|CAR87199.1| tRNA-specific 2-thiouridylase mnmA [Lactobacillus rhamnosus GG]
          Length = 372

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 49/191 (25%), Gaps = 11/191 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +       ++  SGG DSS        +   V  +             C         ++
Sbjct: 1   MDNSNTRVVVGMSGGVDSSVTALLLKQQGYDVVGVFMKNWDDTDENGVC--TATTDYEDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                +     + +            + +    + +    PN  V     I        A
Sbjct: 59  AKVASEIGIPYYSIN---FEKEYWDRVFQYFLDEYKAGRTPNPDVMCNKEIKFKAFLDYA 115

Query: 124 YRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKK 177
            +L    I +G      +         R       +T     L  +       P+  L+K
Sbjct: 116 EQLNADYIAMGHYAQVKTDEQGAVHMLRGADGNKDQTYFLSQLSQDQLKKSMFPIGHLQK 175

Query: 178 YETWKLAQDIG 188
            E  K+A+  G
Sbjct: 176 PEVRKIAEAAG 186


>gi|296328692|ref|ZP_06871209.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium nucleatum subsp. nucleatum ATCC 23726]
 gi|296154291|gb|EFG95092.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium nucleatum subsp. nucleatum ATCC 23726]
          Length = 362

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 50/185 (27%), Gaps = 17/185 (9%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +  SGG DSST       +   +  ++       K E      V   +            
Sbjct: 28  VAMSGGVDSSTVAYLLKQQGYDIFGVTMKTF---KDEDSDAKKVCDDLG----------I 74

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           E +IL +             N      +   PN  +     I            G + + 
Sbjct: 75  EHYILDVRDEFKEKVVDYFVNE---YMNGRTPNPCMVCNRHIKFGKMLDFILSKGASFMA 131

Query: 133 IGVCETDYSGYPDCRHD-TIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
            G      +G      D     +     +       +  P+  L+K +  +LA+ +G + 
Sbjct: 132 TGHYTKLKNGLLSVGDDSNKDQVYFLSQIEKNKLSKIIFPVGDLEKTKLRELAEQLGVRV 191

Query: 192 LVNLI 196
                
Sbjct: 192 YSKKD 196


>gi|291294752|ref|YP_003506150.1| asparagine synthase (glutamine-hydrolyzing) [Meiothermus ruber DSM
           1279]
 gi|290469711|gb|ADD27130.1| asparagine synthase (glutamine-hydrolyzing) [Meiothermus ruber DSM
           1279]
          Length = 611

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 4/67 (5%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYG--QRNKVELECRLCVRKKIVELMPKWKDS 70
           +  SGG DSS   + A  + +RV  + F YG  Q  + E      + +K    +      
Sbjct: 273 VSLSGGLDSSLVAALAAQQHERV--VGFCYGHPQAPRSEGPLARELAQKAGIDVHFVWPE 330

Query: 71  LGEDHIL 77
           L ++H++
Sbjct: 331 LSKEHLV 337


>gi|195118114|ref|XP_002003585.1| GI17996 [Drosophila mojavensis]
 gi|193914160|gb|EDW13027.1| GI17996 [Drosophila mojavensis]
          Length = 694

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 2/56 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIV 61
               LLL SGG DSS C +         ++  +  D G   K E E  +   + I 
Sbjct: 228 NNKVLLLVSGGVDSSVCAALLRKALHPNQIIAVHVDNGFMRKNESENVVRSLRDIG 283


>gi|296875545|ref|ZP_06899617.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus parasanguinis ATCC 15912]
 gi|296433469|gb|EFH19244.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus parasanguinis ATCC 15912]
          Length = 373

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 50/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +   V  +             C     +  
Sbjct: 1   MSD--NSKTRVVVGMSGGVDSSVTALLLKQQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYAQVVRDEDGIVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  +LA++ G
Sbjct: 174 LEKPEVRRLAEEAG 187


>gi|302875784|ref|YP_003844417.1| GMP synthase, large subunit [Clostridium cellulovorans 743B]
 gi|307689219|ref|ZP_07631665.1| GMP synthase [Clostridium cellulovorans 743B]
 gi|302578641|gb|ADL52653.1| GMP synthase, large subunit [Clostridium cellulovorans 743B]
          Length = 510

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 59/191 (30%), Gaps = 30/191 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS             +  +  D+G            +RK   + + + 
Sbjct: 216 KKVLCALSGGVDSSVAAVLVHKAIGKNLTCVFVDHG-----------LLRKDEGDQVEQI 264

Query: 68  KDSLGEDHILPLA----ILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                + +++ +      LG ++  S  +     I +               +      A
Sbjct: 265 FRGQFDMNLIRVNAQERFLGKLAGVSDPEAKRKIIGEEF-------------IRVFEEEA 311

Query: 124 YRLG-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
            +LG I  +V G    D          TI++      L  +    +  PL  L K E   
Sbjct: 312 NKLGEIDFLVQGTIYPDIVESGTATSATIKSHHNVGGLPEDMEFELIEPLRELFKDEVRA 371

Query: 183 LAQDIGGQDLV 193
           + +++G    +
Sbjct: 372 VGEEVGIPHHL 382


>gi|118431057|ref|NP_147253.2| thiamine biosynthesis protein ThiI [Aeropyrum pernix K1]
 gi|150421692|sp|Q9YEW8|THII_AERPE RecName: Full=Probable tRNA sulfurtransferase; AltName: Full=Sulfur
           carrier protein ThiS sulfurtransferase; AltName:
           Full=Thiamine biosynthesis protein thiI; AltName:
           Full=tRNA 4-thiouridine synthase
 gi|116062383|dbj|BAA79428.2| thiamine biosynthesis protein ThiI [Aeropyrum pernix K1]
          Length = 396

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 25/182 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           +L L+SGG DS       + R   V    +D+G       E      +    L  +W   
Sbjct: 181 SLALYSGGFDSGVAAWMIMRRGSPVHLAFYDFG-----VPEALEVAVEGAKTLAGEWAWG 235

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                 +              +  A+ +     P+        + L+ A  LA R G   
Sbjct: 236 YRPRLYVV-----------NFRGAALIVNGLVKPSYRTLVLRRLMLLHAQDLAAREGFEA 284

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G      +                  +     + V  PL  + K E  + +++IG  
Sbjct: 285 LVTGESVGQVASQTVR---------NLRLISSGLELPVLRPLAGMDKDEIVEKSREIGLY 335

Query: 191 DL 192
           D+
Sbjct: 336 DI 337


>gi|152974097|ref|YP_001373614.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|226738386|sp|A7GKG1|GUAA_BACCN RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|152022849|gb|ABS20619.1| GMP synthase, large subunit [Bacillus cytotoxicus NVH 391-98]
          Length = 512

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 218 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFHMN 274

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +                        +K  ++      + G   I++      A   G
Sbjct: 275 VIKIDARERFM---------------KKLKGVEDPEQKRKIIGNEFIYVFDDEA-AKLEG 318

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 319 IDFLAQGTLYTDIIESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 378

Query: 188 GGQDLV 193
           G  D +
Sbjct: 379 GIPDEI 384


>gi|121292051|gb|ABM53644.1| amidotransferase [Escherichia coli]
 gi|121292077|gb|ABM53656.1| amidotransferase [Escherichia coli]
          Length = 378

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 54/195 (27%), Gaps = 16/195 (8%)

Query: 1   MNDIIKKAPS-----ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRL 54
           M++ IKK         ++  SGG DSS     A ++   R      D G      +    
Sbjct: 54  MSESIKKDSKGSDFDCIIGLSGGLDSSYAAYIAKEKMGLRPLLFHVDAGWNTDQAVGNIE 113

Query: 55  CVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            + + +   +     +  E   L L+ L            A               +++I
Sbjct: 114 KLIEGLGLDLYTEVINWEEMKDLQLSFLKSGIPDQDLVQDAAFFSSLYKFARKHKIKHVI 173

Query: 115 --------FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV 166
                              LGI  ++       +   P      +  +   +       +
Sbjct: 174 TGSNFSTECCREPEEWGGYLGIDTMLFNDIHRQFGTRPLNSFPLVDILIYKVFYQKILGM 233

Query: 167 TVHTP--LMWLKKYE 179
            VH P  L+   K +
Sbjct: 234 KVHHPLNLVPFTKKD 248


>gi|195043220|ref|XP_001991577.1| GH11989 [Drosophila grimshawi]
 gi|193901335|gb|EDW00202.1| GH11989 [Drosophila grimshawi]
          Length = 381

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 58/215 (26%), Gaps = 13/215 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-----------VELECRLC 55
                ++  SGG DS+       +R   V  +       +             + E    
Sbjct: 1   MIRRVVVGMSGGVDSAVSAHLLKERGLNVLGVFMRNWDEHDEIGRCTGEQDLKDAEWACR 60

Query: 56  VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
             +  +  +   K          L         +        I+ +      +       
Sbjct: 61  QLQIELRQVNYVKQYWTAVFSQFLDDYQQGLTPNPDILCNKHIKFDLFHRHALDTLQYDA 120

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM-W 174
           +         LG         +           DT +     +    ++ +      +  
Sbjct: 121 VATGHYARNSLGDYLEHRSTDQQKADVRLLIPADTFKDQTFFLAGIPQTALQFTMFPLGG 180

Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHTCYLGKRD 209
           L K E  +LA+ IG Q  + +  E +  C++GKRD
Sbjct: 181 LLKTEVKQLARRIGLQ-RLAVKRESTGICFVGKRD 214


>gi|182625513|ref|ZP_02953284.1| GMP synthase [Clostridium perfringens D str. JGS1721]
 gi|177909201|gb|EDT71666.1| GMP synthase [Clostridium perfringens D str. JGS1721]
          Length = 509

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 57/187 (30%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS            ++  +  D+G   K E +    + K+        
Sbjct: 215 KKLICALSGGVDSSVAAVMVHKAVGKQLTCIFVDHGLLRKDEGDQVEKIFKE-------- 266

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                           ++   +       K++  + P T        F+      A +LG
Sbjct: 267 ------------GFDMNLIRVNAQDRFLGKLKGVSDPETKRKIIGEEFIRVFEEEAGKLG 314

Query: 128 -ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  +V G    D           I++      L  +   ++  PL  L K E   + ++
Sbjct: 315 DIKFLVQGTIYPDVVESGTDTSAVIKSHHNVGGLPEDMEFSLIEPLRELFKDEVRAVGEE 374

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 375 LGIPHHL 381


>gi|188997529|ref|YP_001931780.1| GMP synthase, large subunit [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932596|gb|ACD67226.1| GMP synthase, large subunit [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 511

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 57/192 (29%), Gaps = 18/192 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +     A+   SGG DSS       +   D +  +  D G   K E   R  V K   + 
Sbjct: 211 MVGDKKAICALSGGVDSSVAAVLVHNAIGDNLTCIFVDNGLLRKGE---REQVEKTFRDN 267

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +     L  L  I+     + +   +            +++ +LV      
Sbjct: 268 FH-ISLIVVDAKDRFLKALKGITDPEQKRKIIGNLFIEVFEEEAKKLKDVEYLVQGTLYP 326

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +              S         I+       L    ++ +  PL  L K E  +L
Sbjct: 327 DVIE-------------SVSVKGPSAVIKTHHNVGGLPERMNLKLIEPLRELFKDEVREL 373

Query: 184 AQDIGGQDLVNL 195
            +++G  + +  
Sbjct: 374 GKELGLPEEIIY 385


>gi|169347058|ref|ZP_02866000.1| GMP synthase [Clostridium perfringens C str. JGS1495]
 gi|169296741|gb|EDS78870.1| GMP synthase [Clostridium perfringens C str. JGS1495]
          Length = 509

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 57/187 (30%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS            ++  +  D+G   K E +    + K+        
Sbjct: 215 KKLICALSGGVDSSVAAVMVHKAVGKQLTCIFVDHGLLRKDEGDQVEKIFKE-------- 266

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                           ++   +       K++  + P T        F+      A +LG
Sbjct: 267 ------------GFDMNLIRVNAQDRFLGKLKGVSDPETKRKIIGEEFIRVFEEEAGKLG 314

Query: 128 -ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  +V G    D           I++      L  +   ++  PL  L K E   + ++
Sbjct: 315 DIKFLVQGTIYPDVVESGTDTSAVIKSHHNVGGLPEDMEFSLIEPLRELFKDEVRAVGEE 374

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 375 LGIPHHL 381


>gi|195952783|ref|YP_002121073.1| thiamine biosynthesis protein [Hydrogenobaculum sp. Y04AAS1]
 gi|195932395|gb|ACG57095.1| thiamine biosynthesis protein [Hydrogenobaculum sp. Y04AAS1]
          Length = 345

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 39/123 (31%), Gaps = 3/123 (2%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +   P AL+LFSGG DS          +   V+ + F Y      E + RL +  K  ++
Sbjct: 1   MSHKPKALVLFSGGLDSQLAAVNISKIQGIEVKLIHF-YTGFCITEHKRRLGIPNKDGKI 59

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                     D  LP+ I+                   N+    +  R  + L     + 
Sbjct: 60  PQNPALKAAADLELPIEIIDISQEYINVILNPKFGYGKNINPC-LDCRIFMLLKLKEIME 118

Query: 124 YRL 126
              
Sbjct: 119 KEN 121


>gi|149005874|ref|ZP_01829603.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae SP18-BS74]
 gi|225855906|ref|YP_002737417.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pneumoniae P1031]
 gi|237649790|ref|ZP_04524042.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae CCRI 1974]
 gi|237821488|ref|ZP_04597333.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae CCRI 1974M2]
 gi|307126353|ref|YP_003878384.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae 670-6B]
 gi|254811467|sp|C1CI29|MNMA_STRZP RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|147762230|gb|EDK69191.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae SP18-BS74]
 gi|225725914|gb|ACO21766.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae P1031]
 gi|306483415|gb|ADM90284.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae 670-6B]
          Length = 373

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 50/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            + +    + +    PN  V     I      
Sbjct: 57  KDVVAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMW 174
             A  LG   +  G             H                 L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYARVARDEDGTVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  KLA++ G
Sbjct: 174 LEKPEVRKLAEEAG 187


>gi|110802816|ref|YP_699536.1| GMP synthase [Clostridium perfringens SM101]
 gi|110683317|gb|ABG86687.1| GMP synthase [Clostridium perfringens SM101]
          Length = 509

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 57/187 (30%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS            ++  +  D+G   K E +    + K+        
Sbjct: 215 KKLICALSGGVDSSVAAVMVHKAVGKQLTCIFVDHGLLRKDEGDQVEKIFKE-------- 266

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                           ++   +       K++  + P T        F+      A +LG
Sbjct: 267 ------------GFDMNLIRVNAQDRFLGKLKGVSDPETKRKIIGEEFIRVFEEEAGKLG 314

Query: 128 -ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  +V G    D           I++      L  +   ++  PL  L K E   + ++
Sbjct: 315 DIKFLVQGTIYPDVVESGTDTSAVIKSHHNVGGLPEDMEFSLIEPLRELFKDEVRAVGEE 374

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 375 LGIPHHL 381


>gi|4155868|gb|AAD06840.1| putative TRNA
           (5-METHYLAMINOMETHYL-2-THIOURIDYLATE)-METHYLTRANSFERASE
           [Helicobacter pylori J99]
          Length = 360

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 52/184 (28%), Gaps = 17/184 (9%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           N+ +K      +L SGG DSS       ++   +  +         ++L          +
Sbjct: 14  NERLKM--KIAVLLSGGVDSSYSAYSLKEQGHELVGIY--------LKLHASEKKHDLYI 63

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +   K  + LG    L +        S++        ++   PN       ++    A  
Sbjct: 64  KNAQKACEFLGIP--LEVLDFQKDFKSAVYDEFINAYEEGQTPNPCALCNPLMKFGLALD 121

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWLK 176
            A +LG   I  G                    T         L  E    +  PL  L 
Sbjct: 122 HALKLGCEKIATGHYARVKEIDKVSYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLL 181

Query: 177 KYET 180
           K + 
Sbjct: 182 KKDI 185


>gi|18311257|ref|NP_563191.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Clostridium perfringens str. 13]
 gi|110800712|ref|YP_696947.1| GMP synthase [Clostridium perfringens ATCC 13124]
 gi|168205103|ref|ZP_02631108.1| GMP synthase [Clostridium perfringens E str. JGS1987]
 gi|168211656|ref|ZP_02637281.1| GMP synthase [Clostridium perfringens B str. ATCC 3626]
 gi|168213184|ref|ZP_02638809.1| GMP synthase [Clostridium perfringens CPE str. F4969]
 gi|168216761|ref|ZP_02642386.1| GMP synthase [Clostridium perfringens NCTC 8239]
 gi|24211752|sp|Q8XI46|GUAA_CLOPE RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|18145940|dbj|BAB81981.1| GMP synthetase [Clostridium perfringens str. 13]
 gi|110675359|gb|ABG84346.1| GMP synthase [Clostridium perfringens ATCC 13124]
 gi|170663325|gb|EDT16008.1| GMP synthase [Clostridium perfringens E str. JGS1987]
 gi|170710386|gb|EDT22568.1| GMP synthase [Clostridium perfringens B str. ATCC 3626]
 gi|170715290|gb|EDT27472.1| GMP synthase [Clostridium perfringens CPE str. F4969]
 gi|182381223|gb|EDT78702.1| GMP synthase [Clostridium perfringens NCTC 8239]
          Length = 509

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 57/187 (30%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS            ++  +  D+G   K E +    + K+        
Sbjct: 215 KKLICALSGGVDSSVAAVMVHKAVGKQLTCIFVDHGLLRKDEGDQVEKIFKE-------- 266

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                           ++   +       K++  + P T        F+      A +LG
Sbjct: 267 ------------GFDMNLIRVNAQDRFLGKLKGVSDPETKRKIIGEEFIRVFEEEAGKLG 314

Query: 128 -ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  +V G    D           I++      L  +   ++  PL  L K E   + ++
Sbjct: 315 DIKFLVQGTIYPDVVESGTDTSAVIKSHHNVGGLPEDMEFSLIEPLRELFKDEVRAVGEE 374

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 375 LGIPHHL 381


>gi|14602074|ref|NP_148620.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Aeropyrum pernix K1]
 gi|13627227|sp|Q9Y933|GUAA_AERPE RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|5106156|dbj|BAA81467.1| GMP synthase [glutamine-hydrolyzing] [Aeropyrum pernix K1]
          Length = 512

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 57/193 (29%), Gaps = 29/193 (15%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A+   SGG DS+     A      R+  +  D+G   + E+E  + +  ++         
Sbjct: 221 AVAAVSGGVDSTVAALIAKKAIGSRLYPVFIDHGLHPEGEVERVVKLLSRLGL------- 273

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                         +       +     ++    P         ++       A  +G  
Sbjct: 274 --------------EPVMVDAGEEFLAALEGVGDPEEKRRVVGRVYAEVLERAARDIGAE 319

Query: 130 NIVIGVCETD-YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
            +V G    D          DTI+       L  +  + +  PL +  K E   LA+ +G
Sbjct: 320 YLVQGTIYPDVIESGARPGADTIKTHHNVGGLPKDMRLKLVEPLRYFYKDEVRLLAEKLG 379

Query: 189 GQDLVNLILEESH 201
                 +  E   
Sbjct: 380 ------VPRELIW 386


>gi|325695737|gb|EGD37636.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus sanguinis SK150]
          Length = 373

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 49/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYALTLGADYVATGHYAQVKRDQEGVVHMLRGKDNNKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E   +A+  G
Sbjct: 174 LEKPEVRAIAERAG 187


>gi|325686453|gb|EGD28482.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus sanguinis SK72]
          Length = 373

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 49/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYALTLGADYVATGHYAQVKRDQDGLVHMLRGKDNNKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E   +A+  G
Sbjct: 174 LEKPEVRAIAERAG 187


>gi|310823103|ref|YP_003955461.1| argininosuccinate synthase [Stigmatella aurantiaca DW4/3-1]
 gi|309396175|gb|ADO73634.1| Argininosuccinate synthase [Stigmatella aurantiaca DW4/3-1]
          Length = 396

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 28/61 (45%), Gaps = 1/61 (1%)

Query: 7  KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +   ++L FSGG D+S C+ +  ++   V T++ D G  +   L+       ++  +  
Sbjct: 1  MSKKPVVLAFSGGLDTSFCVVYLREQGHAVTTVTVDTGGFSADALKRMPEQSARLGAVAH 60

Query: 66 K 66
           
Sbjct: 61 H 61


>gi|262281666|ref|ZP_06059435.1| tRNA-specific 2-thiouridylase mnmA [Streptococcus sp. 2_1_36FAA]
 gi|262262120|gb|EEY80817.1| tRNA-specific 2-thiouridylase mnmA [Streptococcus sp. 2_1_36FAA]
          Length = 373

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 49/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYALTLGADYVATGHYAQVKRDQDGLVHMLRGKDNNKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E   +A+  G
Sbjct: 174 LEKPEVRAIAERAG 187


>gi|261363616|ref|ZP_05976499.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria mucosa ATCC 25996]
 gi|288568144|gb|EFC89704.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria mucosa ATCC 25996]
          Length = 367

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 49/189 (25%), Gaps = 10/189 (5%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           DI ++  + ++  SGG DSS   +    +  +V  +     + +  +  C +       +
Sbjct: 2   DITQQPSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWEDDDNDEYCSIKQ-----D 56

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                  +      + +         ++      +      PN  V     I        
Sbjct: 57  SFDAIAVADIIGIDIDIVNFAAQYKDNVFAYFLKEYSAGRTPNPDVLCNAEIKFKCFLDY 116

Query: 123 AYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKK 177
           A   G   I  G                              L          PL  L+K
Sbjct: 117 AIEQGADTIATGHYARKEVRNGVHYLLKGLDQNKDQSYFLYRLKPFQLERAIFPLGDLEK 176

Query: 178 YETWKLAQD 186
            E  +LA +
Sbjct: 177 PEVRRLAAE 185


>gi|210135491|ref|YP_002301930.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter pylori P12]
 gi|210133459|gb|ACJ08450.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methylt ransferase
           [Helicobacter pylori P12]
          Length = 362

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 52/184 (28%), Gaps = 17/184 (9%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           N+ IK      +L SGG DSS       ++   +  +         ++L          +
Sbjct: 16  NERIKM--KIAVLLSGGVDSSYSAYSLKEQGHELVGIY--------LKLHASEKKHDLYI 65

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +   K  + LG    L +        S++        ++   PN       ++    A  
Sbjct: 66  KNAQKACEFLGIP--LEVLDFQKDFKSAVYDEFINAYEEGQTPNPCALCNPLMKFGLALD 123

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWLK 176
            A +LG   I  G                    T         L  E    +  PL  L 
Sbjct: 124 HALKLGCEKIATGHYARVKEIDKISYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLL 183

Query: 177 KYET 180
           K + 
Sbjct: 184 KKDI 187


>gi|205829101|sp|B2IRK2|MNMA_STRPS RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 373

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 52/194 (26%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            + +    + +    PN  V     I      
Sbjct: 57  KDVVAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYARVVRDEDGTVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  KLA++ G
Sbjct: 174 LEKPEVRKLAEEAG 187


>gi|146322787|ref|XP_749563.2| argininosuccinate synthase [Aspergillus fumigatus Af293]
 gi|129556802|gb|EAL87525.2| argininosuccinate synthase [Aspergillus fumigatus Af293]
 gi|159128973|gb|EDP54087.1| argininosuccinate synthase [Aspergillus fumigatus A1163]
          Length = 416

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 5/66 (7%)

Query: 5  IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
          + K    + L FSGG D+S  L W +D    V   + + GQ  + + +       K+  +
Sbjct: 1  MSKGK--VCLAFSGGLDTSVILKWLIDEGYEVVAFTANVGQ--EEDFDAIREKALKLGAV 56

Query: 64 MPKWKD 69
            +  D
Sbjct: 57 KCEIAD 62


>gi|115375177|ref|ZP_01462444.1| argininosuccinate synthase [Stigmatella aurantiaca DW4/3-1]
 gi|115367828|gb|EAU66796.1| argininosuccinate synthase [Stigmatella aurantiaca DW4/3-1]
          Length = 412

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 28/61 (45%), Gaps = 1/61 (1%)

Query: 7  KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +   ++L FSGG D+S C+ +  ++   V T++ D G  +   L+       ++  +  
Sbjct: 17 MSKKPVVLAFSGGLDTSFCVVYLREQGHAVTTVTVDTGGFSADALKRMPEQSARLGAVAH 76

Query: 66 K 66
           
Sbjct: 77 H 77


>gi|71082999|ref|YP_265718.1| argininosuccinate synthase (citrulline--aspartate ligase)
           [Candidatus Pelagibacter ubique HTCC1062]
 gi|119361303|sp|Q4FNX4|ASSY_PELUB RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|71062112|gb|AAZ21115.1| Argininosuccinate synthase (Citrulline--aspartate ligase)
           [Candidatus Pelagibacter ubique HTCC1062]
          Length = 395

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 58/176 (32%), Gaps = 13/176 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVE- 62
           +K     +L +SGG D+S  L W  + +D  V   + D GQ  +++ +  +   K++   
Sbjct: 1   MKSKKKIVLAYSGGLDTSIILKWLQENYDAEVICYTADVGQ--EIDRKKIIKNAKRLGVK 58

Query: 63  --LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             ++   KD+  +D++ P+     I         ++           +  R I       
Sbjct: 59  NIIIEDLKDTFVKDYVFPMIRGHAIYEGVYLLGTSIARP-------LIAKRQIAAAKKFG 111

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
             A   G T         +   +       I A      L   + +  +     + 
Sbjct: 112 AYAVSHGSTGKGNDQVRFELGYHYFGPKVKIIAPWRIWKLNSRTDLIKYAKKNNIP 167


>gi|325282766|ref|YP_004255307.1| Argininosuccinate synthase [Deinococcus proteolyticus MRP]
 gi|324314575|gb|ADY25690.1| Argininosuccinate synthase [Deinococcus proteolyticus MRP]
          Length = 420

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 2/77 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVR-KKIVE 62
          + +    +L +SGG D+S  + W   +R   V   + D GQ  +V+      +R   +  
Sbjct: 1  MTQREKIVLAYSGGLDTSIIIKWLQQERGYDVVAFTADLGQGAEVDEAREKAIRTGAVSA 60

Query: 63 LMPKWKDSLGEDHILPL 79
               ++    D++ P+
Sbjct: 61 YALDLREEFVRDYVFPM 77


>gi|308491228|ref|XP_003107805.1| hypothetical protein CRE_12780 [Caenorhabditis remanei]
 gi|308249752|gb|EFO93704.1| hypothetical protein CRE_12780 [Caenorhabditis remanei]
          Length = 378

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/200 (11%), Positives = 45/200 (22%), Gaps = 10/200 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG---------QRNKVELECRLCVR 57
           K P  ++  SGG DS+        R   V  +                   +      V 
Sbjct: 2   KIPRVVIGMSGGVDSAVSAFLLKRRGFDVIGVHMVNWDSQEEGTSNCPRSKDESDARNVC 61

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
            K+              + + L  L +                          +      
Sbjct: 62  DKLNIPFHTVNFVKEYWNDVFLRFLENYKMGRTVVPDIDCNHFIKFSAFHKVAQERFDAD 121

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW-LK 176
           F AT  Y                        D ++     +    +  +      +  L+
Sbjct: 122 FIATGHYATTSFGDFQQSRNASEEIRLFSGRDPLKDQTFFLCTVTQEQLKRAMFPLGSLQ 181

Query: 177 KYETWKLAQDIGGQDLVNLI 196
           K E  ++A+  G  ++    
Sbjct: 182 KTEVKRIAEQEGFHEVAKKP 201


>gi|303247671|ref|ZP_07333941.1| N-acetyl sugar amidotransferase [Desulfovibrio fructosovorans JJ]
 gi|302490943|gb|EFL50840.1| N-acetyl sugar amidotransferase [Desulfovibrio fructosovorans JJ]
          Length = 389

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/174 (12%), Positives = 43/174 (24%), Gaps = 5/174 (2%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            ++  SGG DS+  L  A+    R   + FD G  +++ +       +++   +      
Sbjct: 69  CVVGVSGGVDSTYTLFKAVSLGLRPLAVHFDNGWDSEIAVHNIENATRRLGVELYTHVVD 128

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
             +   L ++ L   +  +                     R ++      T         
Sbjct: 129 WDDFRRLQISFLKASTSDAEIPTDMAISAVLLQSAARDGLRYVLSGHSFRTEGIVPRDWT 188

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-----PLMWLKKYE 179
              G               T     + + L                 M   K E
Sbjct: 189 YFDGRYIRSVHKRFSGSARTNVPNLSLLALAWYMFGRRIHILPFLNYMEYDKKE 242


>gi|291277585|ref|YP_003517357.1| argininosuccinate synthase [Helicobacter mustelae 12198]
 gi|290964779|emb|CBG40635.1| argininosuccinate synthase [Helicobacter mustelae 12198]
          Length = 401

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 26/72 (36%), Gaps = 3/72 (4%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           A   +L +SGG D+S  L W  +     V T + D GQ  +V         KK+     
Sbjct: 1  MAKKVVLAYSGGLDTSVILKWLGENYGCEVVTFTADIGQGEEVAP--AREKAKKLGIKEE 58

Query: 66 KWKDSLGEDHIL 77
                  +  +
Sbjct: 59 NIFILDLREEFI 70


>gi|258544657|ref|ZP_05704891.1| argininosuccinate synthase [Cardiobacterium hominis ATCC 15826]
 gi|258520075|gb|EEV88934.1| argininosuccinate synthase [Cardiobacterium hominis ATCC 15826]
          Length = 450

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 9/78 (11%)

Query: 1  MNDIIKKA---------PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE 51
          M  ++ +A             + FSGG D+S  L W   +  R    + + GQ ++ + +
Sbjct: 1  MEPLMSQATILQNLPVGEKVGIAFSGGLDTSAALLWMKQKGARPFAYTANLGQPDESDYD 60

Query: 52 CRLCVRKKIVELMPKWKD 69
                ++      +  D
Sbjct: 61 AIPEKARRYGAERARLVD 78


>gi|218295964|ref|ZP_03496744.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermus aquaticus Y51MC23]
 gi|218243702|gb|EED10230.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermus aquaticus Y51MC23]
          Length = 371

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 49/196 (25%), Gaps = 18/196 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVE-----------TLSFDYGQRNKVELECRLC 55
              S L+  SGG DSS       +    V             +S + G     E  C   
Sbjct: 1   MRRSVLVAMSGGVDSSVSAYLLKEAGYEVVGAMMRFWPDLPPVSLETGAARAWESCCTPD 60

Query: 56  VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
              +   +               L    ++   ++             PN        + 
Sbjct: 61  AAYEARRVADLLGIP------FYLLDYREVFEEAIIAPFLEDYARGRTPNPCARCNTFVK 114

Query: 116 LVFAATLAYRLGITNIVIGVC-ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
                  A RLG+  +  G     +                       E+   +  P+  
Sbjct: 115 FGALLKQARRLGLDYVATGHYVRREGEALLRGLDKEKDQSYFLWGTPKEALPHLLFPVGH 174

Query: 175 LKKYETWKLAQDIGGQ 190
           L K E  ++AQ+ G  
Sbjct: 175 LTKKEVRQIAQEAGLP 190


>gi|308812868|ref|XP_003083741.1| COG0137: Argininosuccinate synthase (ISS) [Ostreococcus tauri]
 gi|116055622|emb|CAL58290.1| COG0137: Argininosuccinate synthase (ISS) [Ostreococcus tauri]
          Length = 451

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 47/155 (30%), Gaps = 9/155 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELM-PK 66
              +L +SGG D+S  L W  D     V T + D GQ  ++E       +  + E+    
Sbjct: 53  KKVVLAYSGGLDTSIILKWLQDTYGCEVVTFTADLGQGEELEPARAKAQQMGVKEIFIDD 112

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            ++    D++ P+     +         ++           +  R I         A   
Sbjct: 113 LREEFVRDYVFPMFRANAVYEGKYLLGTSIARP-------LISKRQIEIAKMVGADAVCH 165

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
           G T         +   Y       + A     +L 
Sbjct: 166 GATGKGNDQVRFELGYYGLKPDVKVIAPWREWDLN 200


>gi|21283300|ref|NP_646388.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
           aureus MW2]
 gi|49486454|ref|YP_043675.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|297207658|ref|ZP_06924093.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|300911740|ref|ZP_07129183.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus TCH70]
 gi|24638304|sp|Q8NW84|MNMA_STAAW RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|56749706|sp|Q6G8U8|MNMA_STAAS RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|21204740|dbj|BAB95436.1| (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Staphylococcus aureus subsp. aureus MW2]
 gi|49244897|emb|CAG43358.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|296887675|gb|EFH26573.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|300885986|gb|EFK81188.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus TCH70]
          Length = 372

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 49/191 (25%), Gaps = 11/191 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  K    ++  SGG DSS       ++   V  +             C     +   ++
Sbjct: 1   MSNKDIRVVVGMSGGVDSSVTAHVLKEQGYDVIGIFMKNWDDTDENGVC--TATEDYNDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +          + +            +      + +    PN  V     I        A
Sbjct: 59  IEVCNQIGIPYYAVN---FEKEYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLDHA 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLKK 177
             LG   +  G     +                         L  +    V  P+  ++K
Sbjct: 116 MNLGADYVATGHYARIHRHEDGHVEMLRGVDNNKDQTYFLNQLSQQQLSKVMFPIGDIEK 175

Query: 178 YETWKLAQDIG 188
            E  ++A++ G
Sbjct: 176 IEVRRIAEEQG 186


>gi|261392546|emb|CAX50101.1| tRNA(Ile)-lysidine synthetase (tRNA(Ile)-lysidine synthase;
           tRNA(Ile)-2-lysyl-cytidine synthase) [Neisseria
           meningitidis 8013]
          Length = 426

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/196 (11%), Positives = 44/196 (22%), Gaps = 31/196 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELM 64
               +  SGG DS   L   +    +       L   +G                     
Sbjct: 12  KKTAVALSGGLDSVVLLHLLVRAGKKGGFIPNALHIHHG-----LSPRADDWADFCQNYC 66

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L    +        I  ++  K  A   +           R+     F   +A 
Sbjct: 67  DMLGVGLETVKVCVEKNGLGIEAAARQKRYAAFAEKGFDVLALAHHRDDQIETFMLAVAR 126

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G+  +        +                           +  PL+   + + W  A
Sbjct: 127 GGGLRALAAMPTVRPFGEKGI----------------------IWRPLLPFSRQDIWDYA 164

Query: 185 QDIGGQDLVNLILEES 200
           Q  G  ++ +    ++
Sbjct: 165 QKHGLPNIEDESNSDT 180


>gi|237738052|ref|ZP_04568533.1| bifunctional GMP synthase/glutamine amidotransferase [Fusobacterium
           mortiferum ATCC 9817]
 gi|229419932|gb|EEO34979.1| bifunctional GMP synthase/glutamine amidotransferase [Fusobacterium
           mortiferum ATCC 9817]
          Length = 512

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 56/184 (30%), Gaps = 18/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +       D++  +  D G    +  +    V +   E     
Sbjct: 216 KKVLLGLSGGVDSSVAATLIHKAIGDQLTCIFVDTG---LLRKDEAKKVMEVYGENFHMN 272

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +    L+ L  +S     + +  K              ++ FL         + 
Sbjct: 273 IKCVDAEERF-LSKLAGVSDPESKRKIIGKEFIEVFDEEAAKLTDVEFLAQGTIYPDVIE 331

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             ++                  TI++      L  +    +  PL  L K E  K+ +++
Sbjct: 332 SMSV-------------KGPSMTIKSHHNVGGLPEDMKFKLLEPLRELFKDEVRKVGREL 378

Query: 188 GGQD 191
           G  D
Sbjct: 379 GIPD 382


>gi|156551968|ref|XP_001600621.1| PREDICTED: similar to ENSANGP00000015341 [Nasonia vitripennis]
          Length = 395

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/190 (11%), Positives = 56/190 (29%), Gaps = 11/190 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--------QRNKVELECRLCVRK 58
                ++  SGG DS+        +  +V  +              + + + E    +  
Sbjct: 1   MFKKVIVGISGGVDSAVAALLLKSKGFKVTGIFMRNWDIVNELGECQAEKDYEDAKWICN 60

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-TFVPGRNIIFLV 117
           ++   +      + +      + L +      T N  ++       N  F   R  +   
Sbjct: 61  RLKIPLHDVN-FVKDYWNEVFSYLLENYEVGKTPNPDIQCNKKIKFNKFFHYARTELGAD 119

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW-LK 176
             AT  Y        +   + D +       D+++     ++   +  +      +    
Sbjct: 120 AIATGHYARNSFGSFLEDYKPDTNASLLRAKDSLKDQTFFLSQIPQLSLRRTMFPLGEYL 179

Query: 177 KYETWKLAQD 186
           K +  K+A++
Sbjct: 180 KKDVKKMAKE 189


>gi|149010994|ref|ZP_01832299.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae SP19-BS75]
 gi|147764630|gb|EDK71560.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae SP19-BS75]
          Length = 373

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 52/194 (26%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            + +    + +    PN  V     I      
Sbjct: 57  KDVVAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYARVVRDEDGTVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  KLA++ G
Sbjct: 174 LEKPEVRKLAEEAG 187


>gi|119025704|ref|YP_909549.1| GMP synthase [Bifidobacterium adolescentis ATCC 15703]
 gi|154487478|ref|ZP_02028885.1| hypothetical protein BIFADO_01331 [Bifidobacterium adolescentis
           L2-32]
 gi|118765288|dbj|BAF39467.1| GMP synthase [Bifidobacterium adolescentis ATCC 15703]
 gi|154083996|gb|EDN83041.1| hypothetical protein BIFADO_01331 [Bifidobacterium adolescentis
           L2-32]
          Length = 520

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 55/184 (29%), Gaps = 11/184 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+   +       +++  +  D+G   K E      V+   VE       
Sbjct: 218 VICGLSGGVDSAVAAALVHKAIGEQLTCVFVDHGLLRKGE---AEQVKHDFVEATGIKLI 274

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++          L  +   S  +     I +  +       R +I    A+    +    
Sbjct: 275 AVDA----SEDFLTALKGVSEPEKKRKIIGEKFIRTFEKAQRQVIEEAGASGKEVK---F 327

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +    +  PL  L K E   +  ++G 
Sbjct: 328 LVQGTLYPDVVESGGGDGAANIKSHHNVGGLPKDIKFQLIEPLRTLFKDEVRAIGTELGL 387

Query: 190 QDLV 193
            D +
Sbjct: 388 PDEI 391


>gi|325208130|gb|ADZ03582.1| tRNA(Ile)-lysidine synthase [Neisseria meningitidis NZ-05/33]
          Length = 426

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/196 (11%), Positives = 45/196 (22%), Gaps = 31/196 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELM 64
               +  SGG DS   L   +    +     + L   +G                     
Sbjct: 12  KKTAVALSGGLDSVVLLHLLVRAGKKGGFIPDALHIHHG-----LSPRADDWADFCQNYC 66

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L    +        I  ++  K  A   +           R+     F   +A 
Sbjct: 67  DMLGVGLETVKVCVEKNGLGIEAAARQKRYAAFAEKGFDVLALAHHRDDQIETFMLAVAR 126

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G+  +        +                           +  PL+   + + W  A
Sbjct: 127 GGGLRALAAMPTVRPFGEKGI----------------------IWRPLLPFSRQDIWDYA 164

Query: 185 QDIGGQDLVNLILEES 200
           Q  G  ++ +    ++
Sbjct: 165 QKHGLPNIEDESNSDT 180


>gi|325142740|gb|EGC65116.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria meningitidis 961-5945]
 gi|325198666|gb|ADY94122.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria meningitidis G2136]
 gi|325201768|gb|ADY97222.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria meningitidis M01-240149]
 gi|325208488|gb|ADZ03940.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria meningitidis NZ-05/33]
          Length = 367

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 46/191 (24%), Gaps = 11/191 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN     +   ++  SGG DSS   +    +  +V  +     + +  +  C +      
Sbjct: 1   MNTTANPSN-IIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWEDDDNDEYCSIKQ---- 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +       +      + +          +      +      PN  V     I      
Sbjct: 56  -DSFDAIAVADIVGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLCNAEIKFKCFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A   G   I  G                              L          PL  L
Sbjct: 115 DYAVGQGADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLKPFQLERAIFPLGGL 174

Query: 176 KKYETWKLAQD 186
           +K E  +LA +
Sbjct: 175 EKPEVRRLAAE 185


>gi|319946006|ref|ZP_08020255.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus australis ATCC 700641]
 gi|319747814|gb|EFW00059.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus australis ATCC 700641]
          Length = 373

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 51/194 (26%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D  K     ++  SGG DSS        +   V  +             C     +  
Sbjct: 1   MSDNSKT--RVVVGMSGGVDSSVTALLLKQQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYARVARDEDGIVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  +LA++ G
Sbjct: 174 LEKPEVRRLAEEAG 187


>gi|310817148|ref|YP_003965112.1| argininosuccinate synthase [Ketogulonicigenium vulgare Y25]
 gi|308755883|gb|ADO43812.1| argininosuccinate synthase [Ketogulonicigenium vulgare Y25]
          Length = 412

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 1/70 (1%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKK 59
          M+         +L +SGG D+S  L W   +    V T + D GQ  ++E   +  +   
Sbjct: 1  MSAQKPAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEPARQKALLLG 60

Query: 60 IVELMPKWKD 69
          I E      D
Sbjct: 61 IKEENIHIVD 70


>gi|304387037|ref|ZP_07369292.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria meningitidis ATCC 13091]
 gi|304338909|gb|EFM05008.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria meningitidis ATCC 13091]
          Length = 367

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 46/191 (24%), Gaps = 11/191 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN     +   ++  SGG DSS   +    +  +V  +     + +  +  C +      
Sbjct: 1   MNTTANPSN-IIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWEDDDNDEYCSIKQ---- 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +       +      + +          +      +      PN  V     I      
Sbjct: 56  -DSFDAIAVADIVGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLCNAEIKFKCFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A   G   I  G                              L          PL  L
Sbjct: 115 DYAVGQGADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLKPFQLERAIFPLGGL 174

Query: 176 KKYETWKLAQD 186
           +K E  +LA +
Sbjct: 175 EKPEVRRLAAE 185


>gi|254672922|emb|CBA07279.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria meningitidis alpha275]
          Length = 367

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 46/191 (24%), Gaps = 11/191 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN     +   ++  SGG DSS   +    +  +V  +     + +  +  C +      
Sbjct: 1   MNTTANPSN-IIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWEDDDNDEYCSIKQ---- 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +       +      + +          +      +      PN  V     I      
Sbjct: 56  -DSFDAIAVADIVGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLCNAEIKFKCFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A   G   I  G                              L          PL  L
Sbjct: 115 DYAVGQGADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLKPFQLERAIFPLGGL 174

Query: 176 KKYETWKLAQD 186
           +K E  +LA +
Sbjct: 175 EKPEVRRLAAE 185


>gi|254805310|ref|YP_003083531.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria meningitidis alpha14]
 gi|254668852|emb|CBA06922.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria meningitidis alpha14]
 gi|319410773|emb|CBY91158.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria meningitidis WUE 2594]
 gi|325140698|gb|EGC63213.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria meningitidis CU385]
          Length = 367

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 46/191 (24%), Gaps = 11/191 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN     +   ++  SGG DSS   +    +  +V  +     + +  +  C +      
Sbjct: 1   MNTTANPSN-IIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWEDDDNDEYCSIKQ---- 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +       +      + +          +      +      PN  V     I      
Sbjct: 56  -DSFDAIAVADIVGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLCNAEIKFKCFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A   G   I  G                              L          PL  L
Sbjct: 115 DYAVGQGADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLKPFQLERAIFPLGGL 174

Query: 176 KKYETWKLAQD 186
           +K E  +LA +
Sbjct: 175 EKPEVRRLAAE 185


>gi|161485685|ref|NP_632061.2| argininosuccinate synthase [Methanosarcina mazei Go1]
 gi|24211497|sp|Q8Q0U5|ASSY_METMA RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
          Length = 394

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 56/205 (27%), Gaps = 10/205 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKI--VE 62
                 L +SGG D+S C+    ++  +D V T+S D GQ  + E+       +KI    
Sbjct: 1   MVKKVALAYSGGLDTSVCIPILKEKYGYDEVITISVDVGQ-PEEEIRKADAKAQKISNKH 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                K+    D+I PL          +      +                I L    T 
Sbjct: 60  YTIDAKEEFVRDYIFPLIKANGNYEGYVMGTSVARPLIAKKVVEAAKKEGAIALAHGCTG 119

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
                +    +          P    +  R  E          V       W      W 
Sbjct: 120 KGNDQLRFEAVFRQTDMDVIAPMREMNLTREWEINYAKEHGIPVEATKSKPWSVDENIWS 179

Query: 183 LAQDIGGQD-----LVNLILEESHT 202
            + + G  +         I E + +
Sbjct: 180 RSIEGGRLEDPSFVPPEEIFEWTKS 204


>gi|328953818|ref|YP_004371152.1| GMP synthase (glutamine-hydrolyzing) [Desulfobacca acetoxidans DSM
           11109]
 gi|328454142|gb|AEB09971.1| GMP synthase (glutamine-hydrolyzing) [Desulfobacca acetoxidans DSM
           11109]
          Length = 515

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 53/188 (28%), Gaps = 18/188 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS           DR+  +  + G   + E        +K+V L   
Sbjct: 218 TERVICALSGGVDSSVTAVLLHRAIGDRLTCIFVNNGVLRQGE-------AEKVVRLFR- 269

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 E++ L L  +             +  ++          R              L
Sbjct: 270 ------ENYRLNLVYVDASKSFLKLLEGIVDPEEKRRRIGREFIRVFAEEAGKLGQVKYL 323

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+     P      I+       L     + +  PL  L K E  ++  +
Sbjct: 324 AQGTLYPDVIESVSFKGPSAT---IKTHHNVGGLPEVMPLELIEPLRELFKDEVREVGSE 380

Query: 187 IGGQDLVN 194
           +G  + + 
Sbjct: 381 LGLPEEMI 388


>gi|182683091|ref|YP_001834838.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae CGSP14]
 gi|182628425|gb|ACB89373.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae CGSP14]
          Length = 391

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 52/194 (26%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 19  MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 74

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            + +    + +    PN  V     I      
Sbjct: 75  KDVVAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 131

Query: 121 TLAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 132 DYAMTLGADYVATGHYARVVRDEDGTVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 191

Query: 175 LKKYETWKLAQDIG 188
           L+K E  KLA++ G
Sbjct: 192 LEKPEVRKLAEEAG 205


>gi|168492409|ref|ZP_02716552.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae CDC0288-04]
 gi|183573402|gb|EDT93930.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae CDC0288-04]
          Length = 373

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 52/194 (26%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            + +    + +    PN  V     I      
Sbjct: 57  KDVVAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYARVVRDEDGTVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  KLA++ G
Sbjct: 174 LEKPEVRKLAEEAG 187


>gi|149278805|ref|ZP_01884940.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Pedobacter sp. BAL39]
 gi|149230424|gb|EDM35808.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Pedobacter sp. BAL39]
          Length = 509

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 53/187 (28%), Gaps = 19/187 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G   K E    L   K +       
Sbjct: 214 DKVVLALSGGVDSSVAAILLHKAIGKNLHCIFVDNGLLRKDEYASVLEQYKHLG-----L 268

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                +     L+ L  ++   L +    ++      +     +++ +L         + 
Sbjct: 269 NIKGVDAKERFLSQLAGVTDPELKRKAIGRVFIEVFDDEAHQVQDVKWLAQGTIYPDVIE 328

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                        S        TI++      L     + V  PL  L K E  ++   +
Sbjct: 329 -------------SISVKGPSATIKSHHNVGGLPDFMKLKVVEPLNTLFKDEVRRVGTSL 375

Query: 188 GGQDLVN 194
           G +  + 
Sbjct: 376 GLEHFII 382


>gi|121535460|ref|ZP_01667270.1| GMP synthase, large subunit [Thermosinus carboxydivorans Nor1]
 gi|121305969|gb|EAX46901.1| GMP synthase, large subunit [Thermosinus carboxydivorans Nor1]
          Length = 452

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 51/184 (27%), Gaps = 20/184 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  ++G   K E      V K   +     
Sbjct: 158 KRVLCALSGGVDSSVAAVLVHKAVGDQLTCVFVNHGLLRKGE---AEQVVKTFRDGFHIN 214

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +          L  +   +  +     I +  +       R +              
Sbjct: 215 LVYVDASER----FLNRLRGVTDPEQKRKIIGEEFIRVFEDEARKLG------------D 258

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +V G    D           I++      L  +    +  PL  L K E   LA+++
Sbjct: 259 IEFLVQGTLYPDVIESGTATAAVIKSHHNVGGLPEDMQFKLVEPLRDLFKDEVRILAREL 318

Query: 188 GGQD 191
              +
Sbjct: 319 NLPE 322


>gi|323335655|gb|EGA76938.1| Arg1p [Saccharomyces cerevisiae Vin13]
          Length = 415

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 5/59 (8%)

Query: 5  IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + K    + L +SGG D+S  L+W LD+   V     + GQ  + + +       KI  
Sbjct: 1  MSKGK--VCLAYSGGLDTSVILAWLLDQGYEVVAFMANVGQ--EEDFDAAKEKALKIGA 55


>gi|322829891|gb|EFZ33128.1| GMP synthase, putative [Trypanosoma cruzi]
          Length = 686

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 57/200 (28%), Gaps = 8/200 (4%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKK 59
            +   +    L L SGG DS+ C    L     +RV  +  D+G     E E  +   ++
Sbjct: 244 RERTAQGQKVLCLASGGVDSTVCAVLLLKALGPERVVCVHIDHGFMRLRETEEVVAALRE 303

Query: 60  IVELMPKWKDS-LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP---NTFVPGRNIIF 115
               +          +    +      +     K   +   +       NTF+   + + 
Sbjct: 304 AGVSVFVVDARAQFAEATTEMPARRKCAPYRTGKLCEVTDPEEKRVIIGNTFMSVCDTVI 363

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLM 173
                 +   L     +        S Y     D I+       L  +      +  PL 
Sbjct: 364 RDLQLDVNNLLLAQGTLRPDLIESGSSYASLTADAIKTHHNDTALVRQLRDAGRIIEPLC 423

Query: 174 WLKKYETWKLAQDIGGQDLV 193
              K E  +L   +G    +
Sbjct: 424 DYHKDEVRELGVRLGIPPNL 443


>gi|322388413|ref|ZP_08062016.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus infantis ATCC 700779]
 gi|321140726|gb|EFX36228.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus infantis ATCC 700779]
          Length = 373

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 50/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D  K     ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMW 174
             A  LG   +  G             H                 L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYARVLRDEDGVVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  KLA++ G
Sbjct: 174 LEKPEVRKLAEEAG 187


>gi|322435726|ref|YP_004217938.1| GMP synthase, large subunit [Acidobacterium sp. MP5ACTX9]
 gi|321163453|gb|ADW69158.1| GMP synthase, large subunit [Acidobacterium sp. MP5ACTX9]
          Length = 527

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 60/187 (32%), Gaps = 12/187 (6%)

Query: 11  ALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A+   SGG DSS      A    DR+  +  + G   K E            ++    ++
Sbjct: 225 AICGLSGGVDSSVAAVLVARAIGDRLTCIFVNNGVLRKDE----------FAKVHATMRE 274

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG + +   A    ++  +   +   K +        V       +  A   A      
Sbjct: 275 QLGLNVVAVDAADRFLTKLAGVTDPETKRKVIGGEFISVFDDEAKKIFEAEKSAGEEIAW 334

Query: 130 NIV-IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
            +      +   S        TI++      L  +  + +  PL  L K E  ++ +D+G
Sbjct: 335 LVQGTLYPDVIESSSVKGPSQTIKSHHNVGGLPADMKLKLIEPLRDLFKDEVRRIGRDLG 394

Query: 189 GQDLVNL 195
             D +  
Sbjct: 395 MPDEIIE 401


>gi|297620680|ref|YP_003708817.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Waddlia chondrophila WSU 86-1044]
 gi|297375981|gb|ADI37811.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Waddlia chondrophila WSU 86-1044]
          Length = 354

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/195 (10%), Positives = 50/195 (25%), Gaps = 10/195 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            + + ++  SGG DS+        +   V  L     +    + +C         ++   
Sbjct: 1   MSRTVVVGLSGGVDSAVAALLLKQQGYSVIGLFMKNWEEKDSDGQCSS--AADYEDVSRV 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   + +  +   +   S     +    + +      +  R  I        A  L
Sbjct: 59  CDLLDIPYYGVNFS--QEYWDSVFADCLEEFKKGHTPNPDVLCNRE-IKFKVLFEKAKEL 115

Query: 127 GITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           G   +  G          + +                 +  +   +V  P+  L K E  
Sbjct: 116 GGDYLATGHYCRTRIYEGEAQLLKGADPDKDQSYFLYMIKSDILQSVLFPIGSLPKKEVR 175

Query: 182 KLAQDIGGQDLVNLI 196
           ++A+           
Sbjct: 176 EIARRHNLPVHSKKD 190


>gi|289168790|ref|YP_003447059.1| tRNA methyl transferase [Streptococcus mitis B6]
 gi|288908357|emb|CBJ23199.1| tRNA methyl transferase [Streptococcus mitis B6]
          Length = 373

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 49/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D  K     ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMW 174
             A  LG   +  G             H                 L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYARVARDDDGTVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  KLA+  G
Sbjct: 174 LEKPEVRKLAEKAG 187


>gi|261880130|ref|ZP_06006557.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella bergensis DSM 17361]
 gi|270333185|gb|EFA43971.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella bergensis DSM 17361]
          Length = 384

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 46/189 (24%), Gaps = 7/189 (3%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN    K     +L SGG DSS  +          +      G   K E +C     + +
Sbjct: 1   MNIEELKDKRIAVLLSGGVDSSVVVYELASHGLHPDCFYIRIGPEEKEEWDCNSE--EDM 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                  K    +  ++      +         +             +  R I F  F  
Sbjct: 59  EMATAVAKRFGCKLQVVD--CHQEYWSQVTRYTMEKVRSGFTPNPDVMCNRLIKFGAFDE 116

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKK 177
              +   +             G            +    L       +     P+   +K
Sbjct: 117 KAGHDYDLIATGHYAQTEWIDGRKWLTTSPDPVKDQTDFLAQIEGWQLKKAIFPIGHYEK 176

Query: 178 YETWKLAQD 186
            E  ++A+ 
Sbjct: 177 NEVREIAER 185


>gi|330443730|ref|NP_014583.2| Arg1p [Saccharomyces cerevisiae S288c]
 gi|151945576|gb|EDN63817.1| arginosuccinate synthetase [Saccharomyces cerevisiae YJM789]
 gi|190407287|gb|EDV10554.1| arginosuccinate synthetase [Saccharomyces cerevisiae RM11-1a]
 gi|256273935|gb|EEU08854.1| Arg1p [Saccharomyces cerevisiae JAY291]
 gi|259149426|emb|CAY86230.1| Arg1p [Saccharomyces cerevisiae EC1118]
 gi|323303151|gb|EGA56953.1| Arg1p [Saccharomyces cerevisiae FostersB]
 gi|323307083|gb|EGA60366.1| Arg1p [Saccharomyces cerevisiae FostersO]
 gi|323331674|gb|EGA73088.1| Arg1p [Saccharomyces cerevisiae AWRI796]
 gi|323352336|gb|EGA84871.1| Arg1p [Saccharomyces cerevisiae VL3]
 gi|329138973|tpg|DAA10725.2| TPA: Arg1p [Saccharomyces cerevisiae S288c]
          Length = 420

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 5/59 (8%)

Query: 5  IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + K    + L +SGG D+S  L+W LD+   V     + GQ  + + +       KI  
Sbjct: 1  MSKGK--VCLAYSGGLDTSVILAWLLDQGYEVVAFMANVGQ--EEDFDAAKEKALKIGA 55


>gi|110834136|ref|YP_692995.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Alcanivorax borkumensis SK2]
 gi|123149502|sp|Q0VQ25|MNMA_ALCBS RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|110647247|emb|CAL16723.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Alcanivorax borkumensis SK2]
          Length = 364

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 52/183 (28%), Gaps = 9/183 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS   +  +D   +VE L       +     C    R+ +++ M     
Sbjct: 9   RVIVGMSGGVDSSVAAARLIDAGYQVEGLFMKNWNEDDGTDYC--TAREDLLDAMQVAGV 66

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E H    A   +     +  +   + +    PN  +     I        A  LG  
Sbjct: 67  LGIELHT---ANFAEQYWDRVFAHFLAEYKAGRTPNPDILCNKEIKFQAFLDHAITLGAD 123

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM----WLKKYETWKLAQ 185
            I  G                +   +                 +     L+K E  ++A+
Sbjct: 124 YIATGHYSQVSHTGKAKLLRAVDTNKDQTYFLHAVDYQKFDRTLFPLGDLEKPEVRRIAE 183

Query: 186 DIG 188
             G
Sbjct: 184 QKG 186


>gi|1703453|sp|P22768|ASSY_YEAST RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|984184|emb|CAA62528.1| argininosuccinate synthase [Saccharomyces cerevisiae]
 gi|1419871|emb|CAA99067.1| ARG1 [Saccharomyces cerevisiae]
          Length = 420

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 5/59 (8%)

Query: 5  IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + K    + L +SGG D+S  L+W LD+   V     + GQ  + + +       KI  
Sbjct: 1  MSKGK--VCLAYSGGLDTSVILAWLLDQGYEVVAFMANVGQ--EEDFDAAKEKALKIGA 55


>gi|89067439|ref|ZP_01154952.1| argininosuccinate synthase [Oceanicola granulosus HTCC2516]
 gi|89047008|gb|EAR53062.1| argininosuccinate synthase [Oceanicola granulosus HTCC2516]
          Length = 406

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 3/66 (4%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
          +      +L +SGG D+S  L W   +    V T + D GQ  ++E        + +   
Sbjct: 1  MPAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEP--ARKKAEMMGAS 58

Query: 64 MPKWKD 69
              +D
Sbjct: 59 SIHIED 64


>gi|328462804|gb|EGF34672.1| tRNA-specific 2-thiouridylase MnmA [Lactobacillus rhamnosus MTCC
           5462]
          Length = 372

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 49/191 (25%), Gaps = 11/191 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +       ++  SGG DSS        +   V  +             C         ++
Sbjct: 1   MDNSNTRVVVGMSGGVDSSVTALLLKQQGYDVVGVFMKNWDDTDENGVC--TATTDYEDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                +     + +            + +    + +    PN  V     I        A
Sbjct: 59  AKVASEIGIPYYSIN---FEKEYWDRVFQYFLDEYKAGRTPNPDVMCNKEIKFKAFLDYA 115

Query: 124 YRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKK 177
            +L    I +G      +         R       +T     L  +       P+  L+K
Sbjct: 116 EQLNADYIAMGHYAQVKTDEQGVVHMLRGADGNKDQTYFLSQLSQDQLKKSMFPIGHLQK 175

Query: 178 YETWKLAQDIG 188
            E  K+A+  G
Sbjct: 176 PEVRKIAEAAG 186


>gi|324989555|gb|EGC21501.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus sanguinis SK353]
          Length = 373

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 49/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYALTLGADYVATGHYAQVKRDQDGLVHMLRGKDNNKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E   +A+  G
Sbjct: 174 LEKPEVRAIAERAG 187


>gi|283770696|ref|ZP_06343588.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus subsp.
           aureus H19]
 gi|283460843|gb|EFC07933.1| tRNA-specific 2-thiouridylase mnmA [Staphylococcus aureus subsp.
           aureus H19]
          Length = 372

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 49/191 (25%), Gaps = 11/191 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  K    ++  SGG DSS       ++   V  +             C     +   ++
Sbjct: 1   MSNKDIRVVVGMSGGVDSSVTAHVLKEQGYDVIGIFMKNWDDTDENGVC--TATEDYNDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +          + +            +      + +    PN  V     I        A
Sbjct: 59  IEVCNQIGIPYYAVN---FEKEYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLDHA 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLKK 177
             LG   +  G     +                         L  +    V  P+  ++K
Sbjct: 116 MNLGADYVATGHYTRIHRHEDGHVEMLRGVDNNKDQTYFLNQLSQQQLSKVMFPIGDIEK 175

Query: 178 YETWKLAQDIG 188
            E  ++A++ G
Sbjct: 176 SEVRRIAEEQG 186


>gi|258539512|ref|YP_003174011.1| tRNA-specific 2-thiouridylase MnmA [Lactobacillus rhamnosus Lc 705]
 gi|257151188|emb|CAR90160.1| tRNA-specific 2-thiouridylase mnmA [Lactobacillus rhamnosus Lc 705]
          Length = 372

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 49/191 (25%), Gaps = 11/191 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +       ++  SGG DSS        +   V  +             C         ++
Sbjct: 1   MDNSNTRVVVGMSGGVDSSVTALLLKQQGYDVVGVFMKNWDDTDENGVC--TATTDYEDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                +     + +            + +    + +    PN  V     I        A
Sbjct: 59  AKVASEIGIPYYSIN---FEKEYWDRVFQYFLDEYKAGRTPNPDVMCNKEIKFKAFLDYA 115

Query: 124 YRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKK 177
            +L    I +G      +         R       +T     L  +       P+  L+K
Sbjct: 116 EQLNADYIAMGHYAQVKTDEQGVVHMLRGADGNKDQTYFLSQLSQDQLKKSMFPIGHLQK 175

Query: 178 YETWKLAQDIG 188
            E  K+A+  G
Sbjct: 176 PEVRKIAEAAG 186


>gi|255994856|ref|ZP_05427991.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
          [Eubacterium saphenum ATCC 49989]
 gi|255993569|gb|EEU03658.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
          [Eubacterium saphenum ATCC 49989]
          Length = 351

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 18/56 (32%)

Query: 2  NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          N++I      ++  SGG DS   L    +       +  D+  R           R
Sbjct: 15 NELIDTQDKVVVGLSGGPDSVALLHCLNELGYDCIAVHIDHSLRGCESDGDAEFAR 70


>gi|290581402|ref|YP_003485794.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Streptococcus mutans NN2025]
 gi|254998301|dbj|BAH88902.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Streptococcus mutans NN2025]
          Length = 373

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 48/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MTD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A  LG   +  G             H    A            L  E    V  PL  
Sbjct: 114 DYAMTLGADYVATGHYAQVSRDADGTVHMLRGADNNKDQTYFLSQLSQEQLQKVMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K    ++A+  G
Sbjct: 174 LQKPRVREIAEKAG 187


>gi|325136324|gb|EGC58932.1| tRNA(Ile)-lysidine synthase [Neisseria meningitidis M0579]
          Length = 436

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/196 (11%), Positives = 45/196 (22%), Gaps = 31/196 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELM 64
               +  SGG DS   L   +    +     + L   +G                     
Sbjct: 22  KKTAVALSGGLDSVVLLHLLVRAGKKGGFIPDALHIHHG-----LSPRADDWADFCQNYC 76

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L    +        I  ++  K  A   +           R+     F   +A 
Sbjct: 77  DMLGVGLETVKVCVEKNGLGIEAAARQKRYAAFAEKGFDVLALAHHRDDQIETFMLAVAR 136

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G+  +        +                           +  PL+   + + W  A
Sbjct: 137 GGGLRALAAMPTVRPFGEKGI----------------------IWRPLLPFSRQDIWDYA 174

Query: 185 QDIGGQDLVNLILEES 200
           Q  G  ++ +    ++
Sbjct: 175 QKHGLPNIEDESNSDT 190


>gi|325128268|gb|EGC51153.1| tRNA(Ile)-lysidine synthase [Neisseria meningitidis N1568]
          Length = 426

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/196 (11%), Positives = 45/196 (22%), Gaps = 31/196 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELM 64
               +  SGG DS   L   +    +     + L   +G                     
Sbjct: 12  KKTAVALSGGLDSVVLLHLLVRAGKKGGFIPDALHIHHG-----LSPRADDWADFCQNYC 66

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L    +        I  ++  K  A   +           R+     F   +A 
Sbjct: 67  DMLGVGLETVKVCVEKNGLGIEAAARQKRYAAFAEKGFDVLALAHHRDDQIETFMLAVAR 126

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G+  +        +                           +  PL+   + + W  A
Sbjct: 127 GGGLRALAAMPTVRPFGEKGI----------------------IWRPLLPFSRQDIWDYA 164

Query: 185 QDIGGQDLVNLILEES 200
           Q  G  ++ +    ++
Sbjct: 165 QKHGLPNIEDESNSDT 180


>gi|222151508|ref|YP_002560664.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Macrococcus caseolyticus JCSC5402]
 gi|222120633|dbj|BAH17968.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Macrococcus caseolyticus JCSC5402]
          Length = 371

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 47/189 (24%), Gaps = 11/189 (5%)

Query: 5   IKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  +    ++  SGG DSS       ++   V  +             C     +   ++
Sbjct: 1   MDNSKTKVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDEFGVC--TATEDYEDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +          + +            +      + +    PN  V     I        A
Sbjct: 59  IRVCNQIGIPYYAVN---FEQEYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLEHA 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCRH-----DTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            +LG   +  G                   +          L  E    V  PL  L+K 
Sbjct: 116 VKLGADYVATGHYAQIRRSEDGVEMLRGVDNNKDQTYFLNQLTQEQLSRVMFPLGHLQKP 175

Query: 179 ETWKLAQDI 187
           E  ++A   
Sbjct: 176 EVREIALKH 184


>gi|222529421|ref|YP_002573303.1| GMP synthase [Caldicellulosiruptor bescii DSM 6725]
 gi|259647755|sp|B9MS76|GUAA_ANATD RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|222456268|gb|ACM60530.1| GMP synthase, large subunit [Caldicellulosiruptor bescii DSM 6725]
          Length = 511

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 59/189 (31%), Gaps = 23/189 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS             +  +  D+G   K E E      + +     K
Sbjct: 215 NQKVVCALSGGVDSSVAAVLVHKAIGKNLYCIFVDHGLLRKGEAE------EVVSVFKDK 268

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  ++ +       +      +   +   +  ++              F+      A +L
Sbjct: 269 FDMNVIKVDAKDRFLEALKGVTDPEEKRKIIGRE--------------FIRVFEEEAEKL 314

Query: 127 G-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLA 184
           G I  +V G    D       +  TI++      L  +     +  PL  L K E  ++ 
Sbjct: 315 GDIKFLVQGTIYPDVVESGVGKAATIKSHHNVGGLPEKIKFKQIIEPLRDLFKDEVRRVG 374

Query: 185 QDIGGQDLV 193
            ++G  + +
Sbjct: 375 IELGIPEKI 383


>gi|156937428|ref|YP_001435224.1| argininosuccinate synthase [Ignicoccus hospitalis KIN4/I]
 gi|172044465|sp|A8AA65|ASSY_IGNH4 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|156566412|gb|ABU81817.1| argininosuccinate synthase [Ignicoccus hospitalis KIN4/I]
          Length = 396

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 33/74 (44%), Gaps = 6/74 (8%)

Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRN-----KVELECRLCVRKKIVEL 63
            +L +SGG D+S  ++W  ++    V T++ D GQ+      +         +  +++ 
Sbjct: 3  KIVLAYSGGLDTSVAVAWLKEKFGAEVITVTVDVGQKEDFKEIEERAYKAGASKHYLIDA 62

Query: 64 MPKWKDSLGEDHIL 77
            ++ +   +  I+
Sbjct: 63 KEEFVNKYIKPAII 76


>gi|157107049|ref|XP_001649600.1| argininosuccinate synthase [Aedes aegypti]
 gi|122115039|sp|Q0IFL5|ASSY_AEDAE RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|108879663|gb|EAT43888.1| argininosuccinate synthase [Aedes aegypti]
          Length = 412

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 25/65 (38%), Gaps = 2/65 (3%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          +      LL +SGG D+S  L W L++   V     D GQ  + +         ++    
Sbjct: 1  MSGKEKILLAYSGGLDTSCILKWLLEKGYEVICFMADVGQ--EEDFVAAREKALRVGAKD 58

Query: 65 PKWKD 69
             KD
Sbjct: 59 VIIKD 63


>gi|262306065|gb|ACY45625.1| gln amidotransferase [Limnadia lenticularis]
          Length = 193

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 37/117 (31%), Gaps = 6/117 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALD------RFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           +  + L+L SGG DS+ C +             RV+ +  D G   K E E  +   + +
Sbjct: 43  RDKTILMLVSGGVDSAVCAALLHKALSDGEDNSRVQAVHIDNGFLRKNESEQVVESLRSL 102

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
              +     +L     +             T N   K +        V  R  + L 
Sbjct: 103 GLNLKVVNATLTFLDSVTTVHGRLTLPLCRTVNPEEKRRIIGDTFVKVAHRTAVDLN 159


>gi|224541534|ref|ZP_03682073.1| hypothetical protein CATMIT_00704 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525571|gb|EEF94676.1| hypothetical protein CATMIT_00704 [Catenibacterium mitsuokai DSM
           15897]
          Length = 514

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 51/188 (27%), Gaps = 22/188 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS           +++  +  D+G   K E +    V            
Sbjct: 217 KVLCALSGGVDSSVAAVLLSKAIGNQLTCVFVDHGLLRKNEGDEVEAV------------ 264

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G+D    L  +   +       +    +  +            F+      A ++G 
Sbjct: 265 --FGKDGSYDLNFIRVNAQERYYSKLKGVTEPESKRKII----GEEFIRVFEEEAKKIGA 318

Query: 129 TNIV---IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            + +       +   SG                         +  PL  L K E  K+  
Sbjct: 319 VDFLVQGTIYPDVVESGLGGESAVIKSHHNVGGLPDCVDFKEIIEPLRDLFKDEVRKVGL 378

Query: 186 DIGGQDLV 193
           ++G  + +
Sbjct: 379 ELGIPEYL 386


>gi|169831787|ref|YP_001717769.1| GMP synthase [Candidatus Desulforudis audaxviator MP104C]
 gi|169638631|gb|ACA60137.1| GMP synthase, large subunit [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 513

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 55/186 (29%), Gaps = 22/186 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS   +       DR+  +  D+G   + E      VR+          
Sbjct: 220 RVLCALSGGVDSSVAAALVHRAVGDRLTCVFVDHGLLRQGE---SEQVRETFARRFGMRL 276

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG- 127
             +         + G     +  + +  +                  +      A +LG 
Sbjct: 277 VHVEAQDRFLDRLAGVEDPEAKRRIIGTEF-----------------IRVFEEEAAKLGP 319

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +V G    D           I+       L  +    +  PL WL K E   L +++
Sbjct: 320 IDFLVQGTIYPDVVESGTATGAVIKTHHNVGGLPEDIRFKLIEPLRWLFKDEVRVLGEEL 379

Query: 188 GGQDLV 193
           G  + +
Sbjct: 380 GLPEEI 385


>gi|168487074|ref|ZP_02711582.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae CDC1087-00]
 gi|183570004|gb|EDT90532.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae CDC1087-00]
 gi|332202053|gb|EGJ16122.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae GA41317]
          Length = 373

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 52/194 (26%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            + +    + +    PN  V     I      
Sbjct: 57  KDVVAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYARVVRDEDGTVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  KLA++ G
Sbjct: 174 LEKPEVRKLAEEAG 187


>gi|87122222|ref|ZP_01078105.1| tRNA methyltransferase [Marinomonas sp. MED121]
 gi|86162542|gb|EAQ63824.1| tRNA methyltransferase [Marinomonas sp. MED121]
          Length = 377

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 52/189 (27%), Gaps = 15/189 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K    ++  SGG DSS      + +  +VE L       +     C    +  + +    
Sbjct: 16  KNTKVIVGMSGGVDSSVSALLLIQQGYQVEGLFMKNWDEDDGTEYC--TAKDDLADAQSV 73

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H    A        ++ ++   + +    PN  +     I        A  L
Sbjct: 74  CDKLGIKLHT---ANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNKEIKFKAFLEYANAL 130

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   I         +G+   R       +    L      +     +   K E  K    
Sbjct: 131 GADYI--------ATGHYVRRTHDDNQAKLLKGLDNNKDQSYFLYAVG--KDEIAKSLFP 180

Query: 187 IGGQDLVNL 195
           +G  +   +
Sbjct: 181 VGELEKPEV 189


>gi|77412720|ref|ZP_00788963.1| tRNA methyl transferase [Streptococcus agalactiae CJB111]
 gi|77161229|gb|EAO72297.1| tRNA methyl transferase [Streptococcus agalactiae CJB111]
          Length = 204

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 50/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MTD--NSNIRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYAQVTRDKNGIVHMLRGVDNNKDQTYFLSQLSQEQLQKTLFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  ++A++ G
Sbjct: 174 LQKPEVRRIAEEAG 187


>gi|116749554|ref|YP_846241.1| GMP synthase [Syntrophobacter fumaroxidans MPOB]
 gi|116698618|gb|ABK17806.1| GMP synthase (glutamine-hydrolyzing) [Syntrophobacter fumaroxidans
           MPOB]
          Length = 518

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 50/185 (27%), Gaps = 18/185 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DSS       +    R+  +  + G   K E E    V +           
Sbjct: 224 VICALSGGVDSSVVAVLLHNAIGSRLHCIFVNNGLLRKGEAESVQRVFR----------- 272

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              +   + L        S L       + D       +    +      A     +   
Sbjct: 273 ---DHFSINLIYADA---SDLFLERLKDVTDPERKRKIIGNLFVELFEREAGRLESVKYL 326

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                  +   S        TI+       L    ++ +  PL  L K E   L +++G 
Sbjct: 327 AQGTLYPDVIESVSFKGPSATIKTHHNVGGLPERMNLKLIEPLRELFKDEVRMLGRELGL 386

Query: 190 QDLVN 194
            + + 
Sbjct: 387 PERII 391


>gi|295107449|emb|CBL04992.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain or B
           subunit [Gordonibacter pamelaeae 7-10-1-b]
          Length = 327

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 53/185 (28%), Gaps = 24/185 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +  +     ++  +  ++G   K E E  + V +   +L     
Sbjct: 38  KVLLALSGGVDSSVVAALLIKAIGKQLICVHVNHGLMRKGESEQVVDVFQ--NQLDANLV 95

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                D  L L                        P          F+      A ++G 
Sbjct: 96  YVDATDRFLDLLD------------------GVAEPEAKRKIIGAEFIRVFEEEARKVGD 137

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                               D ++A      L  +    +  P+  L K E   + +++G
Sbjct: 138 EVSF---LAQGTIYPDILESDGVKAHHNVGGLPDDLQFELCEPVKLLYKDEVRVIGRELG 194

Query: 189 GQDLV 193
             + +
Sbjct: 195 LPEGM 199


>gi|269128442|ref|YP_003301812.1| GMP synthase large subunit [Thermomonospora curvata DSM 43183]
 gi|268313400|gb|ACY99774.1| GMP synthase, large subunit [Thermomonospora curvata DSM 43183]
          Length = 527

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 54/188 (28%), Gaps = 15/188 (7%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             A+   SGG DS+   +        R+  +  D+G   K E      V K  V      
Sbjct: 223 KRAICGLSGGVDSAVAAALVQRAIGSRLTCVFVDHGLLRKGE---AEQVEKDFVAAT--- 276

Query: 68  KDSLGEDHILP--LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                + H++      L  +   +   +   K +        V  +    +V A +    
Sbjct: 277 ---GVQLHVVDAQERFLSAL---AGVTDPETKRKIIGREFIRVFEQAAREIVAAHSGEDD 330

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                +   +               I++      L  +    +  PL  L K E   L +
Sbjct: 331 DVEFLVQGTLYPDVVESGGGTGAANIKSHHNVGGLPEDLKFKLVEPLRTLFKDEVRALGE 390

Query: 186 DIGGQDLV 193
            +G    +
Sbjct: 391 QLGLPPEI 398


>gi|81428407|ref|YP_395407.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methylt ransferase
           [Lactobacillus sakei subsp. sakei 23K]
 gi|123564381|sp|Q38XI3|MNMA_LACSS RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|78610049|emb|CAI55098.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus sakei subsp. sakei 23K]
          Length = 379

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/189 (11%), Positives = 45/189 (23%), Gaps = 11/189 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +   V  +             C     +   ++  
Sbjct: 4   HSNTRVVVGMSGGVDSSVTALLLKQQGYDVIGVFMKNWDDTDENGVC--TATEDYEDVAK 61

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    + +            + +    + +    PN  V     +        A  
Sbjct: 62  VASKIGIPYYSVN---FEKEYWDRVFEYFLDEYKHGRTPNPDVMCNKEVKFKAFLDYAME 118

Query: 126 LGITNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           L    I +G            +                  L  +       P+  ++K E
Sbjct: 119 LDADFIAMGHYAQIERDENGIAHMLRGGDSNKDQTYFLSALSQDQLQKSMFPIGHMQKSE 178

Query: 180 TWKLAQDIG 188
             +LA++ G
Sbjct: 179 VRRLAEEAG 187


>gi|322421067|ref|YP_004200290.1| GMP synthase large subunit [Geobacter sp. M18]
 gi|320127454|gb|ADW15014.1| GMP synthase, large subunit [Geobacter sp. M18]
          Length = 516

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 59/197 (29%), Gaps = 22/197 (11%)

Query: 1   MNDIIKK--APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVR 57
           M +I +K      L   SGG DS+           D++  +  + G   K E        
Sbjct: 210 MEEIRRKVGTGKVLCALSGGVDSAVVAVLIHKAIGDQLHCVFVNNGLLRKGE-------A 262

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
            K+V L  K               LG +   S  +               + G   I+L 
Sbjct: 263 DKVVNLFTKHFKINLTHVDAADRFLGMLEGISDPEQKRK-----------IIGNEFIYLF 311

Query: 118 FAATLAY-RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
                   ++          +   S         I++      L  + ++ +  P+  L 
Sbjct: 312 EEEAKKLGQVDYLAQGTLYPDVIESVSTKGPSAVIKSHHNVGGLPEKMNLKLLEPVRELF 371

Query: 177 KYETWKLAQDIGGQDLV 193
           K E   L +++G  D V
Sbjct: 372 KDEVRLLGKELGMPDEV 388


>gi|227893351|ref|ZP_04011156.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus ultunensis DSM 16047]
 gi|227864766|gb|EEJ72187.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus ultunensis DSM 16047]
          Length = 375

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 49/192 (25%), Gaps = 12/192 (6%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           ++  +    ++  SGG DSS        +   V  +             C     +   +
Sbjct: 1   MVDNSKTRVVVGMSGGVDSSVSALLLKQQGYDVVGVFMKNWDDTDDAGVC--TATEDYED 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +           + +            + +    + +    PN  V   + I        
Sbjct: 59  VKKVADKIGIPYYSIN---FEKEYWHRVFEYFLNEYKKGRTPNPDVMCNSQIKFKSFLDF 115

Query: 123 AYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLK 176
           A  L    I +G                R       +T     L  +    V  PL  L 
Sbjct: 116 AMDLDADYIAMGHYAKTVKDKNGIVHMMRPKDGNKDQTYFLSQLSQDQIQKVIFPLANLT 175

Query: 177 KYETWKLAQDIG 188
           K +  ++A   G
Sbjct: 176 KPQVREIALANG 187


>gi|159795613|pdb|2YWC|A Chain A, Crystal Structure Of Gmp Synthetase From Thermus
           Thermophilus In Complex With Xmp
 gi|159795614|pdb|2YWC|B Chain B, Crystal Structure Of Gmp Synthetase From Thermus
           Thermophilus In Complex With Xmp
 gi|159795615|pdb|2YWC|C Chain C, Crystal Structure Of Gmp Synthetase From Thermus
           Thermophilus In Complex With Xmp
 gi|159795616|pdb|2YWC|D Chain D, Crystal Structure Of Gmp Synthetase From Thermus
           Thermophilus In Complex With Xmp
          Length = 503

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 45/188 (23%), Gaps = 19/188 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               LL  SGG DSST              +  D+G     E E      + +   +   
Sbjct: 209 KDRVLLAVSGGVDSSTLALLLAKAGVDHLAVFVDHGLLRLGEREEVEGALRALGVNLLVV 268

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                         L  +      +     I    +       R      F A       
Sbjct: 269 DAK--------ERFLKALKGVEDPEEKRKIIGREFVAAFSQVARERGPFRFLA------- 313

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                  +               I++      L  +    +  P   L K E  +LA  +
Sbjct: 314 ----QGTLYPDVIESAGGHGAAKIKSHHNVGGLPEDLEFELLEPFRLLFKDEVRELALLL 369

Query: 188 GGQDLVNL 195
           G  D + L
Sbjct: 370 GLPDTLRL 377


>gi|148251855|ref|YP_001236440.1| argininosuccinate synthase [Bradyrhizobium sp. BTAi1]
 gi|226729213|sp|A5E8P0|ASSY_BRASB RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|146404028|gb|ABQ32534.1| argininosuccinate synthase [Bradyrhizobium sp. BTAi1]
          Length = 445

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 27/72 (37%), Gaps = 3/72 (4%)

Query: 1  MNDIIK---KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I+K   K     + FSGG D+S  L W   +  R    + + GQ ++ + +      
Sbjct: 1  MTTILKGLPKGEKVGIAFSGGLDTSAALLWMKQKGARCFAYTANLGQPDESDYDEIPRKA 60

Query: 58 KKIVELMPKWKD 69
                  +  D
Sbjct: 61 MSFGAEKARLVD 72


>gi|220929615|ref|YP_002506524.1| GMP synthase [Clostridium cellulolyticum H10]
 gi|259647674|sp|B8I4P0|GUAA_CLOCE RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|219999943|gb|ACL76544.1| GMP synthase, large subunit [Clostridium cellulolyticum H10]
          Length = 511

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 57/188 (30%), Gaps = 23/188 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS            ++  +  D+G   K E +    + +K      ++
Sbjct: 216 KKVLCALSGGVDSSVAAVLIHKAIGKQLTCIFVDHGLLRKYEGDQVEQIFRK------QY 269

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +L   +     +      S       +  ++              F+      A ++G
Sbjct: 270 DINLIRVNCEDRFLQRLKGVSDPETKRKIIGEE--------------FIRVFEDEAKKIG 315

Query: 128 -ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLAQ 185
            +  +V G    D           I++      L        +  PL  L K E  +  +
Sbjct: 316 KVDFLVQGTIYPDVIESGIGDAAVIKSHHNVGGLPEHVDFKEIIEPLRSLFKDEVRRAGE 375

Query: 186 DIGGQDLV 193
           ++G  + +
Sbjct: 376 ELGIPEDL 383


>gi|50955510|ref|YP_062798.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|81390598|sp|Q6AD51|GUAA_LEIXX RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|50951992|gb|AAT89693.1| GMP synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 503

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 56/187 (29%), Gaps = 11/187 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   L   SGG DS+   +       D++  +  D+G   + E      V++  V     
Sbjct: 198 SGRVLCALSGGVDSAVAAALVHKAIGDQLVCVFVDHGLLRRDE---ARQVQEDYVSAT-- 252

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G   I   A    ++      +   K +        V  R    LV  A      
Sbjct: 253 -----GVRLITVDAEEQFLAALESVSDPEAKRKIIGREFIRVFERAQADLVAEAASEGDP 307

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +               I++      L  +    +  PL  L K E   + ++
Sbjct: 308 IRFLVQGTLYPDVVESGGGAGTANIKSHHNVSGLPEDLQFELVEPLCTLFKDEVRAIGRE 367

Query: 187 IGGQDLV 193
           +G  +++
Sbjct: 368 LGLPEVI 374


>gi|55981521|ref|YP_144818.1| GMP synthase [Thermus thermophilus HB8]
 gi|81363900|sp|Q5SI28|GUAA_THET8 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|159795609|pdb|2YWB|A Chain A, Crystal Structure Of Gmp Synthetase From Thermus
           Thermophilus
 gi|159795610|pdb|2YWB|B Chain B, Crystal Structure Of Gmp Synthetase From Thermus
           Thermophilus
 gi|159795611|pdb|2YWB|C Chain C, Crystal Structure Of Gmp Synthetase From Thermus
           Thermophilus
 gi|159795612|pdb|2YWB|D Chain D, Crystal Structure Of Gmp Synthetase From Thermus
           Thermophilus
 gi|55772934|dbj|BAD71375.1| GMP synthase [Thermus thermophilus HB8]
          Length = 503

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 45/188 (23%), Gaps = 19/188 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               LL  SGG DSST              +  D+G     E E      + +   +   
Sbjct: 209 KDRVLLAVSGGVDSSTLALLLAKAGVDHLAVFVDHGLLRLGEREEVEGALRALGVNLLVV 268

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                         L  +      +     I    +       R      F A       
Sbjct: 269 DAK--------ERFLKALKGVEDPEEKRKIIGREFVAAFSQVARERGPFRFLA------- 313

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                  +               I++      L  +    +  P   L K E  +LA  +
Sbjct: 314 ----QGTLYPDVIESAGGHGAAKIKSHHNVGGLPEDLEFELLEPFRLLFKDEVRELALLL 369

Query: 188 GGQDLVNL 195
           G  D + L
Sbjct: 370 GLPDTLRL 377


>gi|46199489|ref|YP_005156.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Thermus thermophilus HB27]
 gi|50400348|sp|Q72IE5|GUAA_THET2 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|46197115|gb|AAS81529.1| GMP synthase [Thermus thermophilus HB27]
          Length = 503

 Score = 49.5 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 45/188 (23%), Gaps = 19/188 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               LL  SGG DSST              +  D+G     E E      + +   +   
Sbjct: 209 KDRVLLAVSGGVDSSTLALLLAKAGVDHLAVFVDHGLLRLGEREEVEGALRALGVNLLVV 268

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                         L  +      +     I    +       R      F A       
Sbjct: 269 DAK--------ERFLKALKGVEDPEEKRKIIGREFVAAFSQVARERGPFRFLA------- 313

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                  +               I++      L  +    +  P   L K E  +LA  +
Sbjct: 314 ----QGTLYPDVIESAGGHGAAKIKSHHNVGGLPEDLEFELLEPFRLLFKDEVRELALLL 369

Query: 188 GGQDLVNL 195
           G  D + L
Sbjct: 370 GLPDTLRL 377


>gi|295134753|ref|YP_003585429.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Zunongwangia profunda SM-A87]
 gi|294982768|gb|ADF53233.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Zunongwangia profunda SM-A87]
          Length = 509

 Score = 49.1 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 54/186 (29%), Gaps = 19/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DS+             +  +  + G   K E E          +++ ++
Sbjct: 214 DKVVLGLSGGVDSTVAAMLLHKAIGKNLYCIFVNNGLLRKNEFE----------DVLHQY 263

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           KD       +          S+   +    I D  L    +    I      A     + 
Sbjct: 264 KDMGLNVKGVD--------SSARFLDALAGISDPELKRKAIGNTFIEVFDDEAHEIKDVT 315

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    +   S   +    TI++      L     + V  PL  L K E  ++  ++
Sbjct: 316 YLAQGTIYPDVIESISVNGPSVTIKSHHNVGGLPDFMKLKVVEPLRMLFKDEVRRVGAEL 375

Query: 188 GGQDLV 193
           G    +
Sbjct: 376 GIAKTL 381


>gi|294786811|ref|ZP_06752065.1| GMP synthase (Glutamine amidotransferase) [Parascardovia
           denticolens F0305]
 gi|315226441|ref|ZP_07868229.1| GMP synthase [Parascardovia denticolens DSM 10105]
 gi|294485644|gb|EFG33278.1| GMP synthase (Glutamine amidotransferase) [Parascardovia
           denticolens F0305]
 gi|315120573|gb|EFT83705.1| GMP synthase [Parascardovia denticolens DSM 10105]
          Length = 520

 Score = 49.1 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 57/186 (30%), Gaps = 11/186 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DS+   +       +++  +  D+G   K E+E    V+   V+     
Sbjct: 216 KQVICGLSGGVDSAVAAALVHKAIGEQLTCVFVDHGFLRKGEVE---QVKHDFVKATGIK 272

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             ++          L  +   S  +     I +  +       R+I+          +  
Sbjct: 273 LVAVDA----SEDFLSALKGVSEPERKRKIIGEKFIRTFEKAARDIVAQAGNEGGEVK-- 326

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   +               I++      L  +   ++  PL  L K E   +  ++
Sbjct: 327 -FLVQGTLYPDVVESGGGSGTANIKSHHNVGGLPADLDFSLIEPLRTLFKDEVRAIGTEL 385

Query: 188 GGQDLV 193
           G  D +
Sbjct: 386 GLPDEI 391


>gi|268611361|ref|ZP_06145088.1| hypothetical protein RflaF_17909 [Ruminococcus flavefaciens FD-1]
          Length = 395

 Score = 49.1 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 9/63 (14%), Positives = 24/63 (38%)

Query: 6  KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
             P  +++ SGG+DS   L +       V  + F +   + +       + +++   + 
Sbjct: 19 SPNPRVIMMLSGGKDSIAALCFLKKLGLDVTAIHFIHKWCSDIPTNEAKRICQQLDIPLK 78

Query: 66 KWK 68
           + 
Sbjct: 79 IYD 81


>gi|259415755|ref|ZP_05739675.1| GMP synthase [Silicibacter sp. TrichCH4B]
 gi|259347194|gb|EEW58971.1| GMP synthase [Silicibacter sp. TrichCH4B]
          Length = 520

 Score = 49.1 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 61/195 (31%), Gaps = 20/195 (10%)

Query: 1   MNDIIKKA---PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCV 56
           M D I++       +   SGG DSS   +   +   D++  +  D+G   K E       
Sbjct: 212 MVDTIREQVGDKKVICALSGGVDSSVAAALIHEAIGDQLTCVFVDHGLLRKNE------- 264

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
            +++V +     +            LG++             +        +        
Sbjct: 265 AEEVVGMFRDHMNLQVIHADETELFLGELEG-------QSDPETKRKIIGKLFIDVFQKY 317

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
                 A  L    +   V E+    +      TI++      L  +  + +  PL  L 
Sbjct: 318 ADQIEGAEFLAQGTLYPDVIESV--SFSGGPSVTIKSHHNVGGLPEKMGLKLVEPLRELF 375

Query: 177 KYETWKLAQDIGGQD 191
           K E   L +++G  D
Sbjct: 376 KDEVRALGRELGLPD 390


>gi|229542570|ref|ZP_04431630.1| GMP synthase, large subunit [Bacillus coagulans 36D1]
 gi|229326990|gb|EEN92665.1| GMP synthase, large subunit [Bacillus coagulans 36D1]
          Length = 517

 Score = 49.1 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 53/187 (28%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS           D++  +  D+G   K E      V K   E    
Sbjct: 222 NKKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AESVMKTFSEGFNM 278

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +          L  +   S  +     I +  +                   A   
Sbjct: 279 NVIKVDA----KERFLKKLKGVSDPEQKRKIIGNEFIYVF------------DDEAAKLE 322

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI  +  G   TD          TI++      L  +   T+  PL  L K E   +  +
Sbjct: 323 GIDFLAQGTLYTDVIESGTTTAQTIKSHHNVGGLPEDMQFTLIEPLNTLFKDEVRAVGTE 382

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 383 LGIPDEI 389


>gi|291534007|emb|CBL07120.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase, contains the PP-loop ATPase domain
           [Megamonas hypermegale ART12/1]
          Length = 135

 Score = 49.1 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 11/102 (10%), Positives = 27/102 (26%), Gaps = 1/102 (0%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMP 65
                 +  SGG DSS   +  +++   V  ++      ++       +   KK+ + + 
Sbjct: 1   MKKKVAVAMSGGVDSSLTAALLIEQGYDVIGVTMTLSDESREAGGSTAVSDAKKVADALN 60

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF 107
                +         ++                   N    F
Sbjct: 61  IPHYVVNYHKKFKDDVIKYFISEYAKGRTPNPCVRCNNTVKF 102


>gi|71666942|ref|XP_820425.1| GMP synthase [Trypanosoma cruzi strain CL Brener]
 gi|70885769|gb|EAN98574.1| GMP synthase, putative [Trypanosoma cruzi]
          Length = 657

 Score = 49.1 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 54/200 (27%), Gaps = 8/200 (4%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKK 59
            +   +    L L SGG DS+ C    L     +RV  +  D+G     E E  +   ++
Sbjct: 215 RERTAQGQKVLCLASGGVDSTVCAVLLLKALGPERVVCVHIDHGFMRLRETEEVVAALRE 274

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP----NTFVPGRNIIF 115
               +                          T+ +              NTF+   + + 
Sbjct: 275 AGVSVVVVHARAQFAEATTEMPARRKCAPYRTRKLCEVTDPEEKRVIIGNTFMSVCDTVI 334

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLM 173
                 +   L     +        S Y     D I+       L  +      +  PL 
Sbjct: 335 RDLQLDVNNLLLAQGTLRPDLIESGSSYASLTADAIKTHHNDTALVRQLRDAGRIIEPLC 394

Query: 174 WLKKYETWKLAQDIGGQDLV 193
              K E  +L   +G    +
Sbjct: 395 DYHKDEVRELGVRLGIPPNL 414


>gi|225857998|ref|YP_002739508.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pneumoniae 70585]
 gi|254811463|sp|C1CAE7|MNMA_STRP7 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|225721738|gb|ACO17592.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae 70585]
          Length = 373

 Score = 49.1 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 52/194 (26%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            + +    + +    PN  V     I      
Sbjct: 57  KDVVAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYARVVRDEDGTVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  KLA++ G
Sbjct: 174 LEKPEVRKLAEEAG 187


>gi|169834334|ref|YP_001693654.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pneumoniae
           Hungary19A-6]
 gi|205828976|sp|B1I833|MNMA_STRPI RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|168996836|gb|ACA37448.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae Hungary19A-6]
          Length = 373

 Score = 49.1 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 50/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            + +    + +    PN  V     I      
Sbjct: 57  KDVVAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMW 174
             A  LG   +  G             H                 L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYARVARDEDGTVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  +LA++ G
Sbjct: 174 LEKPEVRRLAEEAG 187


>gi|148987860|ref|ZP_01819323.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae SP6-BS73]
 gi|148992708|ref|ZP_01822351.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae SP9-BS68]
 gi|149017799|ref|ZP_01834258.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae SP23-BS72]
 gi|168489391|ref|ZP_02713590.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae SP195]
 gi|168493828|ref|ZP_02717971.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae CDC3059-06]
 gi|147926324|gb|EDK77397.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae SP6-BS73]
 gi|147928434|gb|EDK79449.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae SP9-BS68]
 gi|147931363|gb|EDK82341.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae SP23-BS72]
 gi|183572139|gb|EDT92667.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae SP195]
 gi|183576137|gb|EDT96665.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae CDC3059-06]
 gi|301793411|emb|CBW35778.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae INV104]
 gi|332075800|gb|EGI86267.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae GA17570]
 gi|332076573|gb|EGI87035.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae GA17545]
 gi|332204143|gb|EGJ18208.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae GA47901]
          Length = 373

 Score = 49.1 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 50/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            + +    + +    PN  V     I      
Sbjct: 57  KDVVAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMW 174
             A  LG   +  G             H                 L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYARVARDEDGTVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  +LA++ G
Sbjct: 174 LEKPEVRRLAEEAG 187


>gi|332877627|ref|ZP_08445371.1| GMP synthase domain protein [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332684476|gb|EGJ57329.1| GMP synthase domain protein [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 516

 Score = 49.1 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 54/187 (28%), Gaps = 19/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +L  SGG DS+            ++  +  + G            + +K  E    
Sbjct: 220 SEKVILGLSGGVDSTVAAVLLHKAIGSQLHCIFVNNG------------LLRK-NEFANV 266

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            K   G    +      +   S+L        ++       V            T A  L
Sbjct: 267 LKQYEGMGLNVKGVDASERFLSALAGKTD--PEEKRKTIGRVFIEVFDDEAHKITDAKWL 324

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   I   V E+     P      I++      L     + +  PL  L K E  ++ + 
Sbjct: 325 GQGTIYPDVIESLSVKGPSAT---IKSHHNVGGLPDYMKLKIVEPLRMLFKDEVRRVGRT 381

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 382 LGIDPEL 388


>gi|323342361|ref|ZP_08082593.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463473|gb|EFY08667.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 400

 Score = 49.1 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/189 (12%), Positives = 42/189 (22%), Gaps = 25/189 (13%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DS   L     +         +YG+R   + +    + +K  E    
Sbjct: 2   MHKKWIVGVSGGPDSMALLDILSKQNIPCVAAHVNYGKRETSKRD--EDIVRKYCEKNHI 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                                    +    +    N                   L Y  
Sbjct: 60  -----------------------PFECSNYEDDGKNHNFQHQARAFRYAFFKELVLKYDA 96

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I     +   +     +                  VTV  PL+ + K    +   D
Sbjct: 97  EGVAIAHHFNDDLETYLFQKQRKMESEHVGLAQYTEIMDVTVWRPLLDMTKDMVVQYCDD 156

Query: 187 IGGQDLVNL 195
              Q  ++ 
Sbjct: 157 HQIQYGIDE 165


>gi|254820453|ref|ZP_05225454.1| tRNA-specific 2-thiouridylase MnmA [Mycobacterium intracellulare
           ATCC 13950]
          Length = 358

 Score = 49.1 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 45/182 (24%), Gaps = 6/182 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL-MPKWK 68
             L   SGG DSS   +  +D    V  +                    K       +  
Sbjct: 2   KVLAAMSGGVDSSVAAARMVDAGHDVVGVHLALSSSPGTLRSGSRGCCSKEDASDARRVA 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D LG    +      +   + +             PN  V     I     +  A  LG 
Sbjct: 62  DVLGIPFYVW--DFAEKFQADVIDEFVSSYARGETPNPCVVCNQKIKFSALSARAVALGF 119

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYETWKLAQD 186
             +  G      SG    R       ++ +   L  E       P+    K +    A  
Sbjct: 120 DTVATGHYARL-SGGRLRRAVDHDKDQSYVLAVLSAEQLRHAAFPIGDTPKSQIRAEAAR 178

Query: 187 IG 188
            G
Sbjct: 179 RG 180


>gi|167464004|ref|ZP_02329093.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Paenibacillus larvae subsp. larvae BRL-230010]
 gi|322382960|ref|ZP_08056792.1| tRNA-specific 2-thiouridylase MnmA-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
 gi|321153080|gb|EFX45538.1| tRNA-specific 2-thiouridylase MnmA-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
          Length = 364

 Score = 49.1 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 44/190 (23%), Gaps = 12/190 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVEL 63
           +      +L  SGG DSS       ++   V  +   ++    +          + +  +
Sbjct: 1   MNANKRIILGMSGGVDSSVSALLLKEQGYDVIGVFMKNWDDTVEFGHCTAEEDAEDVRRV 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
             +            +           +  +    +        +  R  I         
Sbjct: 61  CDQVGIPFYT-----VNFEKQYMEKVFSYFLNEYKRGRTPNPDVMCNRE-IKFGEFLQKG 114

Query: 124 YRLGITNIVIGVCETDYSGYPDC-----RHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             LG   I  G          +                   L          P+  L K 
Sbjct: 115 LDLGGDYIATGHYARVEERNGEYVLLRGNDPNKDQTYFLHALNQFQLSKAMFPIGHLPKP 174

Query: 179 ETWKLAQDIG 188
           E  KLA++ G
Sbjct: 175 EVRKLAEEAG 184


>gi|163795297|ref|ZP_02189264.1| Argininosuccinate synthase [alpha proteobacterium BAL199]
 gi|159179283|gb|EDP63814.1| Argininosuccinate synthase [alpha proteobacterium BAL199]
          Length = 404

 Score = 49.1 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 52/180 (28%), Gaps = 13/180 (7%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +       +L +SGG D+S  L W  D +   V T + D GQ   +E          + E
Sbjct: 1   MADSPKKVVLAYSGGLDTSIILRWLQDTYNCEVVTFTADLGQGEDLEPARAKAKMMGVKE 60

Query: 63  LM-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +     ++    D + P+     +         ++           +  R I        
Sbjct: 61  IFVEDLREEFVRDFVFPMFRANTLYEGCYLLGTSIARP-------LISKRQIEIAQMTGA 113

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESHVTVHTPLMWLKK 177
            A   G T         + S Y       I A     NL     +  +   H   +   K
Sbjct: 114 DAVAHGATGKGNDQVRFELSYYALQPDIKIIAPWREWNLTSRTALLDYAEKHQIPIAKDK 173


>gi|148996542|ref|ZP_01824260.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae SP11-BS70]
 gi|307066804|ref|YP_003875770.1| putative tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase [Streptococcus pneumoniae AP200]
 gi|147757117|gb|EDK64156.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae SP11-BS70]
 gi|306408341|gb|ADM83768.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase, contains the PP-loop ATPase domain
           [Streptococcus pneumoniae AP200]
          Length = 373

 Score = 49.1 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 50/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            + +    + +    PN  V     I      
Sbjct: 57  KDVVAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMW 174
             A  LG   +  G             H                 L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYARVARDEDGTVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  +LA++ G
Sbjct: 174 LEKPEVRRLAEEAG 187


>gi|294793679|ref|ZP_06758816.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Veillonella sp. 3_1_44]
 gi|294455249|gb|EFG23621.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Veillonella sp. 3_1_44]
          Length = 363

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 56/191 (29%), Gaps = 18/191 (9%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV--RKKIVEL 63
                  +  SGG DSS   +  L +  +V  ++           E  L V   KK+ + 
Sbjct: 10  SMEKVIAVAMSGGVDSSLTAAMLLKQGYKVFGITLWLWVSGTPYDEVPLAVTDAKKMCDF 69

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +        E H++    +   +            +  N     V     I        A
Sbjct: 70  L------GIEHHVIDARDVFYENVVDYFVKEYAYGRTPNPC---VFCNKNIKFDLMLNRA 120

Query: 124 YRLGITNIVIGVCETDYSGYPD-----CRHDTIRAIETAINLGMESHV--TVHTPLMWLK 176
             LG T++V G                 +       ++ +   M   +   +  PL    
Sbjct: 121 LELGATHMVTGHYAQVNYNEKTGLYELHKGVDPTKDQSYVMYNMNQRILSHLMFPLGGQC 180

Query: 177 KYETWKLAQDI 187
           K ET KLA + 
Sbjct: 181 KTETRKLAAEY 191


>gi|282162868|ref|YP_003355253.1| argininosuccinate synthase [Methanocella paludicola SANAE]
 gi|282155182|dbj|BAI60270.1| argininosuccinate synthase [Methanocella paludicola SANAE]
          Length = 393

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 55/187 (29%), Gaps = 5/187 (2%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP- 65
              +L +SGG D+S C+    + +  D+V T++ D GQ    E+E      K I +    
Sbjct: 2   KKVVLAYSGGLDTSVCIPILKENYGFDKVITVTVDVGQPA-GEIETASKKAKLIADKHYT 60

Query: 66  -KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              KD    D+I P      +    +      +                  L    T   
Sbjct: 61  MDAKDEFVRDYIFPAIKANAMYEGYVIGTSLARPLIAKKCVDVALKEKADALAHGCTGRG 120

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
              +    +          P    +  R+ E       +  V V     W      W  +
Sbjct: 121 NDQLRFEAVFRTTDLPVIAPMRDMNLSRSWEIEYAKKHKIPVPVTKAKPWSVDENIWSRS 180

Query: 185 QDIGGQD 191
            + G  +
Sbjct: 181 IEGGKLE 187


>gi|253582187|ref|ZP_04859410.1| bifunctional GMP synthase/glutamine amidotransferase [Fusobacterium
           varium ATCC 27725]
 gi|251835726|gb|EES64264.1| bifunctional GMP synthase/glutamine amidotransferase [Fusobacterium
           varium ATCC 27725]
          Length = 512

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 56/184 (30%), Gaps = 18/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +       D++  +  D G    +  +    V +   E     
Sbjct: 216 KKVLLGLSGGVDSSVAATLIHKAIGDQLTCIFVDTG---LLRKDEAKKVMEVYGENFHMN 272

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +    L  L  +S     + +  K             +++ FL         + 
Sbjct: 273 IKCIDAEDRF-LTKLAGVSDPETKRKIIGKEFIEVFDEEAKKIKDVEFLAQGTIYPDVIE 331

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             ++                  TI++      L  +    +  PL  L K E  K+ +++
Sbjct: 332 SMSV-------------KGPSMTIKSHHNVGGLPEDMKFKLLEPLRELFKDEVRKVGREL 378

Query: 188 GGQD 191
           G  D
Sbjct: 379 GIPD 382


>gi|189461693|ref|ZP_03010478.1| hypothetical protein BACCOP_02357 [Bacteroides coprocola DSM 17136]
 gi|189431580|gb|EDV00565.1| hypothetical protein BACCOP_02357 [Bacteroides coprocola DSM 17136]
          Length = 353

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 54/186 (29%), Gaps = 10/186 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE--CRLCVRKKIVE 62
           +++    LL  SGG DSS       D    V  ++F + +++           + +++  
Sbjct: 1   MQENNKVLLGMSGGTDSSVAALLLQDAGYEVTGVTFRFYEKDNNTEYLDDARELCERL-H 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +     D+  E     ++   +   +  T        +           +   +   AT 
Sbjct: 60  ISHITYDARNEFRERIISYFINEYMTGRTPVPCTLCNNYLKWPLLKKLADEKGIYHFATG 119

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
            Y             T      D         +  +         +  P+  L K +  +
Sbjct: 120 HYVQKRNIDGYWHITTGTDVDKDQSFFLWGLPQDILQ-------RMLLPMGKLTKNKVRE 172

Query: 183 LAQDIG 188
           +A + G
Sbjct: 173 IAAERG 178


>gi|170104908|ref|XP_001883667.1| argininosuccinate synthase [Laccaria bicolor S238N-H82]
 gi|164641302|gb|EDR05563.1| argininosuccinate synthase [Laccaria bicolor S238N-H82]
          Length = 417

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
          + +K    LL +SGG D+S  L+W +++   V     D GQ  + +          +   
Sbjct: 1  MSEKLGRVLLAYSGGLDTSCILAWLIEQGYEVYAFMADVGQ--EEDFAAAEKKALAVGAK 58

Query: 64 MPKWKD 69
               D
Sbjct: 59 KFFLAD 64


>gi|162138526|ref|YP_483713.2| argininosuccinate synthase [Rhodopseudomonas palustris HaA2]
          Length = 445

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 3/72 (4%)

Query: 1  MNDIIKKAPS---ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M+ I+K  P      + FSGG D+S  L W   +  RV   + + GQ ++ + +      
Sbjct: 1  MSTILKSLPKGENVGIAFSGGLDTSAALLWMKQKGARVFAYTANLGQPDEADYDEIPRKA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 MEFGAEKARLVD 72


>gi|86570245|gb|ABD04802.1| argininosuccinate synthase [Rhodopseudomonas palustris HaA2]
          Length = 462

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 3/72 (4%)

Query: 1  MNDIIKKAPS---ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M+ I+K  P      + FSGG D+S  L W   +  RV   + + GQ ++ + +      
Sbjct: 18 MSTILKSLPKGENVGIAFSGGLDTSAALLWMKQKGARVFAYTANLGQPDEADYDEIPRKA 77

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 78 MEFGAEKARLVD 89


>gi|90421559|ref|YP_529929.1| argininosuccinate synthase [Rhodopseudomonas palustris BisB18]
 gi|122477786|sp|Q21DC6|ASSY_RHOPB RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|90103573|gb|ABD85610.1| argininosuccinate synthase [Rhodopseudomonas palustris BisB18]
          Length = 445

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 3/72 (4%)

Query: 1  MNDIIKKAPS---ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M+ I+K  P      + FSGG D+S  L W   +  RV   + + GQ ++ + +      
Sbjct: 1  MSTILKSLPKGENVGIAFSGGLDTSAALLWMKQKGARVFAYTANLGQPDEADYDEIPRKA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 MEFGAEKARLVD 72


>gi|332529830|ref|ZP_08405784.1| argininosuccinate synthase [Hylemonella gracilis ATCC 19624]
 gi|332040851|gb|EGI77223.1| argininosuccinate synthase [Hylemonella gracilis ATCC 19624]
          Length = 445

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +            + +  D
Sbjct: 16 IAFSGGLDTSAALLWMKKKGAEPYAYTANLGQPDESDYDAIPKKALGYGAKLARLID 72


>gi|297544156|ref|YP_003676458.1| NAD+ synthetase [Thermoanaerobacter mathranii subsp. mathranii str.
           A3]
 gi|296841931|gb|ADH60447.1| NAD+ synthetase [Thermoanaerobacter mathranii subsp. mathranii str.
           A3]
          Length = 543

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/193 (9%), Positives = 51/193 (26%), Gaps = 2/193 (1%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             A++  SGG DS+   + A++    + V  +S      ++        + + +      
Sbjct: 288 KKAVVGLSGGIDSAVVCAIAVEALGKENVLAVSMPSRYSSEGSKSDARILAENLGIEFRV 347

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                  +  L +    + +   L +         N           I L         +
Sbjct: 348 IPIEPVFESYLSVFNGDNSAIGDLAEENIQARIRGNYLMFISNREGHIVLTTGNKSELAM 407

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   +   +  +        +       +          +++       +     K    
Sbjct: 408 GYCTLYGDMSGSLAPIADVPKTMVYELAKYINRKKEIIPISIIEKAPSAELRPNQKDEDS 467

Query: 187 IGGQDLVNLILEE 199
           +    +++ IL+ 
Sbjct: 468 LPPYKILDEILKM 480


>gi|227486632|ref|ZP_03916948.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Anaerococcus lactolyticus ATCC 51172]
 gi|227235344|gb|EEI85359.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Anaerococcus lactolyticus ATCC 51172]
          Length = 367

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 51/193 (26%), Gaps = 12/193 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D  KK    ++  SGG DSS       +    V  +             C     +  
Sbjct: 1   MTD--KKDIKVIVGISGGVDSSVAALLLKEEGYDVTGIFMKNWDDTDENGFC--TAEEDF 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            + +          + +         +  +      + +    PN  +     I      
Sbjct: 57  EDAVAVCNQIGIPYYSIN---FEKEYYDRVFSYFLDEYKKGRTPNPDIMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGY---PDCRHDTIRAIETAI--NLGMESHVTVHTPLMWL 175
             A  LG   +  G               R       +T     L  E    V  P+  L
Sbjct: 114 DFAKNLGADYLATGHYARVDRTDGETKMLRGLDNNKDQTYFLSQLSQEQIKDVLFPVGDL 173

Query: 176 KKYETWKLAQDIG 188
           +K E  ++A+  G
Sbjct: 174 QKSEVREIAKKAG 186


>gi|198274479|ref|ZP_03207011.1| hypothetical protein BACPLE_00627 [Bacteroides plebeius DSM 17135]
 gi|198272681|gb|EDY96950.1| hypothetical protein BACPLE_00627 [Bacteroides plebeius DSM 17135]
          Length = 349

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 51/186 (27%), Gaps = 10/186 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR--NKVELECRLCVRKKIVE 62
           +K+    LL  SGG DSS       D    V  ++F + ++  N   L+    + + +  
Sbjct: 1   MKENNKVLLGMSGGTDSSVAALLLQDAGYEVTGITFRFYEKDGNIEYLDDARDLCRTLGI 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
               +         +    + +    +    V   + +N L    +        ++    
Sbjct: 61  PHLIYDAREMFQEKIIRYFIQEYM--AGRTPVPCTLCNNYLKWPLLQQVADEKGIYHLAT 118

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
            + +    I                            L       +  P+  L K    +
Sbjct: 119 GHYVNKQKIDGYWY------ITCGNDADKDQSFFLWGLPQSILERMCLPMGGLTKTRVRE 172

Query: 183 LAQDIG 188
           +A   G
Sbjct: 173 IAAARG 178


>gi|295687578|ref|YP_003591271.1| argininosuccinate synthase [Caulobacter segnis ATCC 21756]
 gi|295429481|gb|ADG08653.1| argininosuccinate synthase [Caulobacter segnis ATCC 21756]
          Length = 408

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 60/210 (28%), Gaps = 19/210 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           M +  K     +L +SGG D+S  L W   +    V T + D GQ  ++E      +   
Sbjct: 1   MAE--KPVKKVVLAYSGGLDTSIILKWLQTEHNAEVVTFTADLGQGEEIEPARAKALAAG 58

Query: 60  I---VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
           +      +   ++    D++ P+         + T      +   ++    +  + I   
Sbjct: 59  VKPENIFIEDVREEFVRDYVFPM-------FRANTVYEGQYLLGTSIARPLIAKKQIEIA 111

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
                 A   G T         +   Y      T+ A     +      +          
Sbjct: 112 RKTGADAVSHGATGKGNDQVRFELGYYGLEPDITVIAPWREWDFKSREALLDFAE----- 166

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLG 206
           K++        G      +     H+   G
Sbjct: 167 KHQIQITKDKRGEAPFS-VDANLLHSSSEG 195


>gi|224537479|ref|ZP_03678018.1| hypothetical protein BACCELL_02358 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520917|gb|EEF90022.1| hypothetical protein BACCELL_02358 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 350

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 43/178 (24%), Gaps = 11/178 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +K     LL  SGG DSS       D    V  ++F            +    + + +  
Sbjct: 1   MKSKERVLLGMSGGTDSSVAAMRLQDAGYEVTGVTFR--------FYEKDGATEYLDDAR 52

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                   E          ++  S + +    +    + P       N +     A +A 
Sbjct: 53  ALASRLGIEHITYD---AREMFRSRIIRYFIDEYLAGHTPVPCTLCNNELKWTLLAKIAD 109

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
             GI  I  G                    +      +          M L   +  K
Sbjct: 110 EKGIYWISTGHYVRKILQGGKYYMAPAADRDKDQTFFLWGLKQDIIQRMLLPMGDITK 167


>gi|217964341|ref|YP_002350019.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria monocytogenes HCC23]
 gi|254811452|sp|B8DDZ8|MNMA_LISMH RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|217333611|gb|ACK39405.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria monocytogenes HCC23]
 gi|307571093|emb|CAR84272.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Listeria monocytogenes L99]
          Length = 371

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/185 (11%), Positives = 48/185 (25%), Gaps = 12/185 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS       ++   V  +   ++   ++  +         ++ +  +  
Sbjct: 9   RVVVGMSGGVDSSVTAHILKEQGYDVIGIFMKNWDDTDEFGVCTATEDYDDVIRVANQIG 68

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                     +    +      T  +             +     I        A  LG 
Sbjct: 69  IPYYA-----VNFEKEYWDKVFTYFLDEYKLGRTPNPDVMC-NKEIKFKAFLEHAESLGA 122

Query: 129 TNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +  G          +        +          L  +    V  PL  ++K E  ++
Sbjct: 123 DFVATGHYAQVKKVGDEIELLRGVDNNKDQTYFLNQLSQDQLKKVMFPLGAMEKTEVREI 182

Query: 184 AQDIG 188
           A+  G
Sbjct: 183 AKKAG 187


>gi|163785075|ref|ZP_02179792.1| hypothetical protein HG1285_11328 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879656|gb|EDP73443.1| hypothetical protein HG1285_11328 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 351

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 49/192 (25%), Gaps = 7/192 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +  SGG DSS       ++   V  ++               C  + + +       
Sbjct: 2   KVAVGMSGGVDSSVAALLLKEKGYDVTGITLKLSSIENSCDIQVCCSPQDVKDAEKVASF 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E + +      D  +  +   V    +        V  R I        +    G  
Sbjct: 62  LGIEHYTIDWE--KDFKNKVIDYFVNELKEGKTPNPCSVCNREIKTGRLYKYVNLVFGAD 119

Query: 130 NIVIGVCETDYSGYPD---CRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYETWKLA 184
            +  G               R   ++  ++     +E  V   +  PL    K E  K+A
Sbjct: 120 FLATGHYIKTVEINGQKLIKRGKDLKKDQSYFMALVEKEVLNGLLFPLGDFTKEEVRKIA 179

Query: 185 QDIGGQDLVNLI 196
           +  G        
Sbjct: 180 EKYGLPVSQKKD 191


>gi|325847124|ref|ZP_08169950.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325481096|gb|EGC84141.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 369

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 55/191 (28%), Gaps = 10/191 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M +  KK    ++  SGG DSS       +    V  +          E E  +C  +  
Sbjct: 1   MENKDKKDIKVIVGVSGGVDSSVAALLLKEEGYDVSGIFMKNW---DEEDENGVCTAEVD 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            E   K  + +G  +           +  +      + +    PN  +     I      
Sbjct: 58  YEDAVKVCNQIGIPY--YSINFEKEYYDRVFSYFLDEYKKGRTPNPDIMCNKEIKFKAFL 115

Query: 121 TLAYRLGITNIVIGVCETDYSG---YPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWL 175
             A  LG   +  G               R       +T     L  +    V  P+  L
Sbjct: 116 DYAKDLGADYLATGHYARVDRSSGETKMLRGIDSNKDQTYFLSQLSQDQIKDVLFPVGNL 175

Query: 176 KKYETWKLAQD 186
            K E  K+A++
Sbjct: 176 DKKEVRKIAKE 186


>gi|325204175|gb|ADY99628.1| tRNA(Ile)-lysidine synthase [Neisseria meningitidis M01-240355]
          Length = 426

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/196 (11%), Positives = 45/196 (22%), Gaps = 31/196 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELM 64
               +  SGG DS   L   +    +     + L   +G                     
Sbjct: 12  KKTAVALSGGLDSVVLLHLLVRAGKKGGFIPDALHIHHG-----LSPRADDWADFCQNYC 66

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L    I        I  ++  K  A   +           R+     F   +A 
Sbjct: 67  DMLGVGLETVKICVEKNGLGIEAAARQKRYAAFAEKGFDVLALAHHRDDQIETFMLAVAR 126

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G+  +        +                           +  PL+   + + W  A
Sbjct: 127 GGGLRALAAMPAVRPFGEKGI----------------------IWRPLLPFSRQDIWDYA 164

Query: 185 QDIGGQDLVNLILEES 200
           Q  G  ++ +    ++
Sbjct: 165 QKHGLPNIEDESNSDT 180


>gi|325130238|gb|EGC53008.1| tRNA(Ile)-lysidine synthase [Neisseria meningitidis OX99.30304]
          Length = 426

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/196 (11%), Positives = 45/196 (22%), Gaps = 31/196 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELM 64
               +  SGG DS   L   +    +     + L   +G                     
Sbjct: 12  KKTAVALSGGLDSVVLLHLLVRAGKKGGFIPDALHIHHG-----LSPRADDWADFCQNYC 66

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L    I        I  ++  K  A   +           R+     F   +A 
Sbjct: 67  DMLGVGLETVKICVEKNGLGIEAAARQKRYAAFAEKGFDVLALAHHRDDQIETFMLAVAR 126

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G+  +        +                           +  PL+   + + W  A
Sbjct: 127 GGGLRALAAMPAVRPFGEKGI----------------------IWRPLLPFSRQDIWDYA 164

Query: 185 QDIGGQDLVNLILEES 200
           Q  G  ++ +    ++
Sbjct: 165 QKHGLPNIEDESNSDT 180


>gi|319410441|emb|CBY90801.1| tRNA(Ile)-lysidine synthetase (tRNA(Ile)-lysidine synthase;
           tRNA(Ile)-2-lysyl-cytidine synthase) [Neisseria
           meningitidis WUE 2594]
          Length = 436

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/196 (11%), Positives = 45/196 (22%), Gaps = 31/196 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELM 64
               +  SGG DS   L   +    +     + L   +G                     
Sbjct: 22  KKTAVALSGGLDSVVLLHLLVRAGKKGGFIPDALHIHHG-----LSPRADDWADFCQNYC 76

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L    +        I  ++  K  A   +           R+     F   +A 
Sbjct: 77  DMLGVGLETVKVCVEKNGLGIEAAARQKRYAAFAEKGFDVLALAHHRDDQIETFMLAVAR 136

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G+  +        +                           +  PL+   + + W  A
Sbjct: 137 GGGLRALAAMPTVRPFGEKGI----------------------IWRPLLPFSRQDIWDYA 174

Query: 185 QDIGGQDLVNLILEES 200
           Q  G  ++ +    ++
Sbjct: 175 QKHGLPNIEDESNSDT 190


>gi|296268616|ref|YP_003651248.1| GMP synthase large subunit [Thermobispora bispora DSM 43833]
 gi|296091403|gb|ADG87355.1| GMP synthase, large subunit [Thermobispora bispora DSM 43833]
          Length = 517

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 53/185 (28%), Gaps = 14/185 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+   +       DR+  +  D+G   K E E                 
Sbjct: 217 RAICGLSGGVDSAVAAAIVHRAIGDRLTCVFVDHGLLRKGEAEQVER---------DFVA 267

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  +  ++  +    +   +  ++   K +        V       +   A        
Sbjct: 268 ATGVKLRVVDASD-RFLKALAGVRDPEEKRKIIGREFIRVFEDEARAIRATAGGPVD--- 323

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +   T+  PL  L K E  +  +++G
Sbjct: 324 FLVQGTLYPDVVESGHGTGTANIKSHHNVGGLPEDLKFTLVEPLRTLFKDEVRRAGEELG 383

Query: 189 GQDLV 193
               +
Sbjct: 384 LPPAI 388


>gi|254671868|emb|CBA04090.1| cell cycle protein [Neisseria meningitidis alpha275]
          Length = 436

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/196 (11%), Positives = 45/196 (22%), Gaps = 31/196 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELM 64
               +  SGG DS   L   +    +     + L   +G                     
Sbjct: 22  KKTAVALSGGLDSVVLLHLLVRAGKKGGFIPDALHIHHG-----LSPRADDWADFCQNYC 76

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L    +        I  ++  K  A   +           R+     F   +A 
Sbjct: 77  DMLGVGLETVKVCVEKNGLGIEAAARQKRYAAFAEKGFDVLALAHHRDDQIETFMLAVAR 136

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G+  +        +                           +  PL+   + + W  A
Sbjct: 137 GGGLRALAAMPTVRPFGEKGI----------------------IWRPLLPFSRQDIWDYA 174

Query: 185 QDIGGQDLVNLILEES 200
           Q  G  ++ +    ++
Sbjct: 175 QKHGLPNIEDESNSDT 190


>gi|257064612|ref|YP_003144284.1| GMP synthase (glutamine-hydrolyzing) [Slackia heliotrinireducens
           DSM 20476]
 gi|256792265|gb|ACV22935.1| GMP synthase (glutamine-hydrolyzing) [Slackia heliotrinireducens
           DSM 20476]
          Length = 536

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 52/185 (28%), Gaps = 12/185 (6%)

Query: 10  SALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +L  SGG DSS   +  A     R+  +  ++G   K E E    V  K        +
Sbjct: 224 RVILGLSGGVDSSVVAALCARAIGSRLTCVFVNHGLLRKNEPEEVEEVFTK--------Q 275

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             +   H+        +    +      +I      N F      I          +   
Sbjct: 276 FDVDFVHVHAEERYAGLLAGVVDPEEKRRIIGTQFWNEFFAVAQDI---AEDGRPVQFMA 332

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
              +        +     +  TI++    I      H  +  PL    K E   L   +G
Sbjct: 333 QGTIYPDIIESGARKTGGKASTIKSHHNLIPFPEGVHFDLIEPLDHFFKDEVRALGTALG 392

Query: 189 GQDLV 193
             D +
Sbjct: 393 LPDYI 397


>gi|77459818|ref|YP_349325.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas fluorescens Pf0-1]
 gi|123604062|sp|Q3KA70|MNMA_PSEPF RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|77383821|gb|ABA75334.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudomonas fluorescens Pf0-1]
          Length = 374

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 33/136 (24%), Gaps = 5/136 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS      +++   VE L     + +     C       + +     
Sbjct: 11  KKRVIVGMSGGVDSSVSALLLIEQGYEVEGLFMKNWEEDDGTEYC--TAMDDLADAQAVC 68

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                + H        +   +     +A            +  R  I        A  LG
Sbjct: 69  DKIGIKLHT--ANFAAEYWDNVFEHFLAEYKAGRTPNPDILCNRE-IKFKAFLDYAMMLG 125

Query: 128 ITNIVIGVCETDYSGY 143
              I  G         
Sbjct: 126 ADLIATGHYVRRRDID 141


>gi|24380473|ref|NP_722428.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus mutans UA159]
 gi|30173426|sp|Q8DRS4|MNMA_STRMU RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|24378503|gb|AAN59734.1|AE015035_3 putative tRNA [Streptococcus mutans UA159]
          Length = 373

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 48/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MTD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A  LG   +  G             H    A            L  E    V  PL  
Sbjct: 114 DYAMTLGADYVATGHYAQVSRDADGTVHMLRGADNNKDQTYFLSQLSQEQLQKVMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K    ++A+  G
Sbjct: 174 LQKPRVREIAEKAG 187


>gi|332860101|ref|XP_515202.3| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 isoform 2
           [Pan troglodytes]
          Length = 418

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/113 (11%), Positives = 29/113 (25%), Gaps = 9/113 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--------QRNKVELECRLCV 56
           ++     +   SGG DS+        R  +V  +                  + E    V
Sbjct: 1   MQAVRHVVCALSGGVDSAVAALLLRRRGYQVTGVFMKNWDSLDEHGVCTADKDCEDAYRV 60

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
            + +     +    + E      +   +      T N  +    +   + F  
Sbjct: 61  CQILDIPFHQVS-YVKEYWNDVFSDFLNEYEKGRTPNPDIVCNKHIKFSCFFH 112


>gi|329115339|ref|ZP_08244093.1| Argininosuccinate synthase [Acetobacter pomorum DM001]
 gi|326695318|gb|EGE47005.1| Argininosuccinate synthase [Acetobacter pomorum DM001]
          Length = 413

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 48/156 (30%), Gaps = 7/156 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K     +L +SGG D+S  L W        V T + D GQ  ++E        +K  E+ 
Sbjct: 8   KDVKKVVLAYSGGLDTSVILRWLQKTYGCEVVTFTADLGQGEELEP------ARKKAEMF 61

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +  + +     +         + T      +   ++    +  R I         A 
Sbjct: 62  GVKEIFVEDLRETFVKDFVFPMFRANTLYEGQYLLGTSIARPLIAQRQIEIAEAVGADAV 121

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
             G T         + + Y      T+ A     +L
Sbjct: 122 AHGATGKGNDQVRFELAYYALKPDITVIAPWREWDL 157


>gi|307213343|gb|EFN88795.1| Argininosuccinate synthase [Harpegnathos saltator]
          Length = 412

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
          +       +L +SGG D+S  L W  ++  +V     + GQ    +L+       KI  +
Sbjct: 1  MSDSKKKVILAYSGGLDTSCILFWLREKGFQVVAYVANIGQN--EDLDAVRKKALKIGAV 58

Query: 64 MPKWKD 69
               D
Sbjct: 59 KVVIDD 64


>gi|289522842|ref|ZP_06439696.1| ThiI family protein [Anaerobaculum hydrogeniformans ATCC
          BAA-1850]
 gi|289503866|gb|EFD25030.1| ThiI family protein [Anaerobaculum hydrogeniformans ATCC
          BAA-1850]
          Length = 190

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/37 (40%), Positives = 18/37 (48%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
          +  K+P ALLLFSGG DS             V  L+F
Sbjct: 6  MKNKSPKALLLFSGGLDSLLAGELLRRNGVTVTCLAF 42


>gi|289524536|ref|ZP_06441390.1| ThiI family protein [Anaerobaculum hydrogeniformans ATCC
          BAA-1850]
 gi|289502224|gb|EFD23388.1| ThiI family protein [Anaerobaculum hydrogeniformans ATCC
          BAA-1850]
          Length = 181

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/37 (40%), Positives = 18/37 (48%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
          +  K+P ALLLFSGG DS             V  L+F
Sbjct: 6  MKNKSPKALLLFSGGLDSLLAGELLRRNGVTVTCLAF 42


>gi|316931625|ref|YP_004106607.1| argininosuccinate synthase [Rhodopseudomonas palustris DX-1]
 gi|315599339|gb|ADU41874.1| argininosuccinate synthase [Rhodopseudomonas palustris DX-1]
          Length = 445

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 29/72 (40%), Gaps = 3/72 (4%)

Query: 1  MNDIIKKAPS---ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I+K  P      + FSGG D+S  L W   +  +V   + + GQ ++ + +      
Sbjct: 1  MTTILKSLPKGENVGIAFSGGLDTSAALLWMKQKGAKVFAYTANLGQPDEADYDAIPRKA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 MEFGAEKARLVD 72


>gi|157363709|ref|YP_001470476.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermotoga lettingae TMO]
 gi|205828979|sp|A8F5H8|MNMA_THELT RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|157314313|gb|ABV33412.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermotoga lettingae TMO]
          Length = 349

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/185 (11%), Positives = 43/185 (23%), Gaps = 16/185 (8%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSF---------DYGQRNKVELECRLCVRKKIVEL 63
           +L SGG DS+  L    +    +              +   ++K+       V  K++  
Sbjct: 5   ILLSGGVDSAVALYQLKNEGYEIVAYHMKTMKDEFFLNRQVKHKICCSPSDTVDAKLIAK 64

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  +   H +            +T  +    +       +   R I F      + 
Sbjct: 65  TAGVPLKVVNLHEI-------FKEKIITYYLQEYTRGRTPNPCYFCNRFIKFGYLMDLMI 117

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
                                              ++  E    +  P     K E   +
Sbjct: 118 EDGVDVISSGHYARVVDGKLLKALDKEKDQSYFLASIEKERLKKIVFPNGDKTKDEIRDI 177

Query: 184 AQDIG 188
           A+  G
Sbjct: 178 AKKAG 182


>gi|150399831|ref|YP_001323598.1| argininosuccinate synthase [Methanococcus vannielii SB]
 gi|150012534|gb|ABR54986.1| Argininosuccinate synthase [Methanococcus vannielii SB]
          Length = 397

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 63/190 (33%), Gaps = 22/190 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +   A+L +SGG D+S CL    D++  +V +++ D GQ  + +L+      KK+  L  
Sbjct: 2   QEKIAVLAYSGGLDTSCCLKLLEDKYNYKVVSVAVDVGQ-PEDDLKEPEEKAKKLGVL-- 58

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  + + +      +                             +  +  A LA  
Sbjct: 59  -------KHYTID---AKEEFAVDYIFRAIKANALYEGYPLSTALARPLIAIKIAELAKE 108

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G   I  G        +        +A E  I   +          + L + E  + A+
Sbjct: 109 IGADAISHGCTGKGNDQFRFESVMRAKAPEIEIIAPIRD--------LNLTRTEEIQYAK 160

Query: 186 DIGGQDLVNL 195
           + G    V+L
Sbjct: 161 EKGIPIPVDL 170


>gi|39933469|ref|NP_945745.1| argininosuccinate synthase [Rhodopseudomonas palustris CGA009]
 gi|192288828|ref|YP_001989433.1| argininosuccinate synthase [Rhodopseudomonas palustris TIE-1]
 gi|81698422|sp|Q6NCS7|ASSY_RHOPA RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|226729200|sp|B3Q9D3|ASSY_RHOPT RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|39647315|emb|CAE25836.1| argininosuccinate synthase [Rhodopseudomonas palustris CGA009]
 gi|192282577|gb|ACE98957.1| Argininosuccinate synthase [Rhodopseudomonas palustris TIE-1]
          Length = 445

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 29/72 (40%), Gaps = 3/72 (4%)

Query: 1  MNDIIKKAPS---ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I+K  P      + FSGG D+S  L W   +  +V   + + GQ ++ + +      
Sbjct: 1  MTTILKSLPKGENVGIAFSGGLDTSAALLWMKQKGAKVFAYTANLGQPDEADYDAIPRKA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 MEFGAEKARLVD 72


>gi|67921332|ref|ZP_00514851.1| GMP synthase, C-terminal:GMP synthase, N-terminal [Crocosphaera
           watsonii WH 8501]
 gi|67857449|gb|EAM52689.1| GMP synthase, C-terminal:GMP synthase, N-terminal [Crocosphaera
           watsonii WH 8501]
          Length = 515

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 53/186 (28%), Gaps = 11/186 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST          D++  +  D G   K E E    +           
Sbjct: 212 KRVLLALSGGVDSSTLAFLLHQAIGDKLTCMFIDQGFMRKGEPE---RLMDIFDRQFHIP 268

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            + +   H     +      +   K   +   +          R    L     LA    
Sbjct: 269 VEYV---HARDRFLNKLEGITDPEKKRRLIGHEFIQVFEEESKR----LGPFDYLAQGTL 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +++            +     I++      L  +    +  PL  L K E  K+ + I
Sbjct: 322 YPDVIESADTNVDPKTGERVAVKIKSHHNVGGLPKDLRFKLVEPLRKLFKDEVRKVGRSI 381

Query: 188 GGQDLV 193
           G  + +
Sbjct: 382 GLPEEI 387


>gi|196251089|ref|ZP_03149769.1| GMP synthase, large subunit [Geobacillus sp. G11MC16]
 gi|196209383|gb|EDY04162.1| GMP synthase, large subunit [Geobacillus sp. G11MC16]
          Length = 590

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 55/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 296 KKVLCALSGGVDSSVAAVLVHRAIGDQLTCIFVDHGLLRKGE---AESVMKTFREQFQMN 352

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       LA L  +S     + +                 N    VF    A   G
Sbjct: 353 VIKVDAKERF-LAKLKGVSDPEQKRKI---------------IGNEFIYVFDDEAAKLEG 396

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +V G   TD          TI++      L  +    +  PL  L K E   L   +
Sbjct: 397 IEFLVQGTLYTDIIESGTATAQTIKSHHNVGGLPEDMKFELIEPLNTLFKDEVRALGTQL 456

Query: 188 GGQDLV 193
           G  D +
Sbjct: 457 GIPDEI 462


>gi|332982204|ref|YP_004463645.1| GMP synthase [Mahella australiensis 50-1 BON]
 gi|332699882|gb|AEE96823.1| GMP synthase (glutamine-hydrolyzing) [Mahella australiensis 50-1
           BON]
          Length = 511

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 56/189 (29%), Gaps = 23/189 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             SAL   SGG DSS            R+  +  D+G   + E+E    V K+       
Sbjct: 215 NGSALCALSGGVDSSVAAMLVHKAIGRRLTCILVDHGLMRQDEVEEVERVFKE------- 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                    ++  +         +T     +                 F+      A  L
Sbjct: 268 --QFNVNLVVVDASDRFLSKLKGVTDPERKR-----------KIIGEEFIRVFEEQAKAL 314

Query: 127 G-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-VHTPLMWLKKYETWKLA 184
           G I  +V G    D           I++      L  +     +  PL  L K E  K+ 
Sbjct: 315 GHIDYLVQGTIYPDVIESGRGDAAVIKSHHNVGGLPEDIDFKGIIEPLRNLFKDEVRKVG 374

Query: 185 QDIGGQDLV 193
            ++G  + V
Sbjct: 375 LELGMPEKV 383


>gi|317488593|ref|ZP_07947138.1| GMP synthase domain-containing protein [Eggerthella sp. 1_3_56FAA]
 gi|325831967|ref|ZP_08165064.1| GMP synthase (glutamine-hydrolyzing) [Eggerthella sp. HGA1]
 gi|316912335|gb|EFV33899.1| GMP synthase domain-containing protein [Eggerthella sp. 1_3_56FAA]
 gi|325486288|gb|EGC88740.1| GMP synthase (glutamine-hydrolyzing) [Eggerthella sp. HGA1]
          Length = 535

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 50/185 (27%), Gaps = 12/185 (6%)

Query: 8   APSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +L  SGG DSS   +  A     ++  +  ++G   K E E          E+   
Sbjct: 221 SDRVILGLSGGVDSSVVAALCAKAIGKQLTCVFINHGLLRKNEPE----------EVEDV 270

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +      D +   A     +  +       K +                L         L
Sbjct: 271 FTKQFDVDFVHVHAEDRYAALLADVVEPEQKRRIIGSQFWKEFFAVAEELAENGRPVKYL 330

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                +        +     +  TI++    I      H  +  PL    K E   L   
Sbjct: 331 -AQGTIYPDIIESGARKTGGKASTIKSHHNLIPFPDGVHFDLIEPLDHFFKDEVRALGTT 389

Query: 187 IGGQD 191
           +G  D
Sbjct: 390 LGLPD 394


>gi|294790765|ref|ZP_06755923.1| GMP synthase (Glutamine amidotransferase) [Scardovia inopinata
           F0304]
 gi|294458662|gb|EFG27015.1| GMP synthase (Glutamine amidotransferase) [Scardovia inopinata
           F0304]
          Length = 520

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 53/184 (28%), Gaps = 11/184 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DS+   +       D++  +  D+G   K E+E    V+   V+     
Sbjct: 216 KRVICGLSGGVDSAVAAALVHKAVGDQLTCVFVDHGLLRKGEVE---QVKHDFVQATGIK 272

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             ++          L  +   +  +     I +  +       R I+          +  
Sbjct: 273 LVTVDASEE----FLSALDGVTEPERKRKIIGEKFIRTFEKATRQIVADAHDEGGEIK-- 326

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   +               I++      L  +    +  PL  L K E   +   +
Sbjct: 327 -FLVQGTLYPDVVESGGGDGAANIKSHHNVGGLPEDLDFELIEPLRTLFKDEVRAIGTKL 385

Query: 188 GGQD 191
           G  D
Sbjct: 386 GLPD 389


>gi|238879556|gb|EEQ43194.1| argininosuccinate synthase [Candida albicans WO-1]
          Length = 416

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 41/135 (30%), Gaps = 16/135 (11%)

Query: 5   IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + K    + L +SGG D+S  L+W L++   V     + GQ    E +     +K +   
Sbjct: 1   MSKGK--VCLAYSGGLDTSVILAWLLEQGYEVIAFLANIGQ----EEDFEEAEKKALA-- 52

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  +G    + + +  +         +       N+          +       +A
Sbjct: 53  -------IGATKFVVVDVRKEFVEKVCFPAIQSNAIYENVYLLGTSLARPVIAQAQIKVA 105

Query: 124 YRLGITNIVIGVCET 138
              G   +  G    
Sbjct: 106 EENGCFAVSHGCTGK 120


>gi|241957900|ref|XP_002421669.1| arginosuccinate synthase, putative [Candida dubliniensis CD36]
 gi|223645014|emb|CAX39607.1| arginosuccinate synthase, putative [Candida dubliniensis CD36]
          Length = 416

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 41/135 (30%), Gaps = 16/135 (11%)

Query: 5   IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + K    + L +SGG D+S  L+W L++   V     + GQ    E +     +K +   
Sbjct: 1   MSKGK--VCLAYSGGLDTSVILAWLLEQGYEVIAFLANIGQ----EEDFEEAEKKALA-- 52

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  +G    + + +  +         +       N+          +       +A
Sbjct: 53  -------IGATKFVVVDVRKEFVEKVCFPAIQSNAIYENVYLLGTSLARPVIAQAQIKVA 105

Query: 124 YRLGITNIVIGVCET 138
              G   +  G    
Sbjct: 106 EENGCFAVSHGCTGK 120


>gi|49471691|gb|AAT66133.1| tRNA (5-methylaminomethyl-2-thiouridyl-methyltransferase-like
          protein [Mycoplasma arthritidis]
          Length = 109

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 13/35 (37%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
           A   +L  SGG DSS C      +   V  L   
Sbjct: 1  MAKRVVLGMSGGVDSSVCAYLLQQQGYEVVGLFMR 35


>gi|121998186|ref|YP_001002973.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Halorhodospira halophila SL1]
 gi|166234856|sp|A1WWV9|MNMA_HALHL RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|121589591|gb|ABM62171.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Halorhodospira halophila SL1]
          Length = 383

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/141 (9%), Positives = 31/141 (21%), Gaps = 4/141 (2%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +     ++  SGG DS+      +     V  L     + +    +C       I   
Sbjct: 1   MTESPKRIVVGLSGGVDSAVAALRLVRAGHEVIGLFMKNWEDDDTLTQCS--AEDDIAAA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +   +        +                +             +  R++ F  F     
Sbjct: 59  VAVAEHLGIPIRRVN--FAAHYRREVFEHALQELRAGRTPNPDILCNRHVKFDRFLRHAR 116

Query: 124 YRLGITNIVIGVCETDYSGYP 144
            +     +  G          
Sbjct: 117 EQFEADAVATGHYARTGRAGD 137


>gi|325958300|ref|YP_004289766.1| Queuosine synthesis-like protein [Methanobacterium sp. AL-21]
 gi|325329732|gb|ADZ08794.1| Queuosine synthesis-like protein [Methanobacterium sp. AL-21]
          Length = 198

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
           A +L+SGG+DSS            VE ++ +YG
Sbjct: 2  KACVLYSGGKDSSLMAFILNKLGYDVELVTVNYG 35


>gi|294791818|ref|ZP_06756966.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Veillonella sp. 6_1_27]
 gi|294457048|gb|EFG25410.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Veillonella sp. 6_1_27]
          Length = 363

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 56/191 (29%), Gaps = 18/191 (9%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV--RKKIVEL 63
                  +  SGG DSS   +  L +  +V  ++           E  L V   KK+ + 
Sbjct: 10  SMEKVIAVAMSGGVDSSLTAAMLLKQGYKVFGITLWLWVSGTPYDEVPLAVTDAKKMCDF 69

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +        E H++    +   +            +  N     V     I        A
Sbjct: 70  L------GIEHHVIDARDVFYENVVDYFVKEYAYGRTPNPC---VFCNKNIKFDLMLNRA 120

Query: 124 YRLGITNIVIGVCETDYSGYPD-----CRHDTIRAIETAINLGMESHV--TVHTPLMWLK 176
             LG T++V G                 +       ++ +   M   +   +  PL    
Sbjct: 121 LELGATHMVTGHYAQVNYNEKTGLYELHKGVDPTKDQSYVMYNMNQRILSHLMFPLGGQC 180

Query: 177 KYETWKLAQDI 187
           K ET KLA + 
Sbjct: 181 KTETRKLAAEY 191


>gi|293609848|ref|ZP_06692150.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828300|gb|EFF86663.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 228

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 44/121 (36%), Gaps = 7/121 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF--DYGQR---NKVELECRLCVRKKIV 61
               +++ FSGG+DSS  L  A+   + +  +    + GQR   + + L+      K I 
Sbjct: 10  NHKRSIVSFSGGKDSSLALYHAMQTGEVIGLIVMLEEQGQRSRSHAMPLDIIQAQAKAIG 69

Query: 62  --ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
              LM     +  E   + L        + +     + + ++   +  V  +  + L   
Sbjct: 70  FPVLMASSSWNDYELKFIELLNQAKQQGAEVLVTGDLDMPEHGCWHDRVTQQVGLQLAMP 129

Query: 120 A 120
            
Sbjct: 130 L 130


>gi|225026567|ref|ZP_03715759.1| hypothetical protein EUBHAL_00817 [Eubacterium hallii DSM 3353]
 gi|224956116|gb|EEG37325.1| hypothetical protein EUBHAL_00817 [Eubacterium hallii DSM 3353]
          Length = 300

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 63/191 (32%), Gaps = 16/191 (8%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCV 56
           M +++ +    ++L+S G+DSS  L  AL  F         L  +   + K  +E R  +
Sbjct: 18  MREVVAECEKPVMLYSIGKDSSVMLHLALKAFYPEKPPFPFLHVNTTWKFKEMIEFRDKI 77

Query: 57  RKKIV-ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
            +K   +++    +   +  I P       +    T+ +   +        F  GR    
Sbjct: 78  AEKYGLDMIEYINEDGVKKGINPFDHGSSYTDIMKTQALKQALDKYGFTAAFGGGRRD-- 135

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
                          I      +      + R +  +   T I+ G E  V    P+   
Sbjct: 136 ------EEKSRAKERIFSFRNSSHAWDPKNQRPEMWKLYNTNIHQGEEMRV---FPISNW 186

Query: 176 KKYETWKLAQD 186
            + + W+  Q 
Sbjct: 187 TEKDIWQYIQR 197


>gi|91781835|ref|YP_557041.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia xenovorans LB400]
 gi|123359156|sp|Q145K0|MNMA_BURXL RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|91685789|gb|ABE28989.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia xenovorans LB400]
          Length = 381

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 30/131 (22%), Gaps = 5/131 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS       ++   V  L     + +     C         + +   
Sbjct: 3   KQKVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDSEYCSTRQ-----DWIDVV 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +      +            +      +      PN  V     I        A  LG
Sbjct: 58  SVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLG 117

Query: 128 ITNIVIGVCET 138
              I  G    
Sbjct: 118 AQTIATGHYAR 128


>gi|113474718|ref|YP_720779.1| GMP synthase [Trichodesmium erythraeum IMS101]
 gi|110165766|gb|ABG50306.1| GMP synthase (glutamine-hydrolyzing) [Trichodesmium erythraeum
           IMS101]
          Length = 575

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 55/186 (29%), Gaps = 11/186 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST          D++  +  D G   K E E  + +     E     
Sbjct: 272 KRVLLALSGGVDSSTLAFLLHQAIGDKLTCMFIDQGFMRKYEPENLVKIFH---ESFHIS 328

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       L+IL  +       +   K +        V       L     LA    
Sbjct: 329 VKYVNARDRF-LSILKGV------SDPEEKRKLIGHEFIQVFEEESKRLGPFDYLAQGTL 381

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +++            +     I++      L  +    +  PL  L K E   + + I
Sbjct: 382 YPDVIESANTNVDPKTGERVAVKIKSHHNVGGLPKDLRFKLVEPLRKLFKDEVRNVGRSI 441

Query: 188 GGQDLV 193
           G  + +
Sbjct: 442 GLPEEI 447


>gi|304383964|ref|ZP_07366420.1| GMP synthase [Prevotella marshii DSM 16973]
 gi|304334856|gb|EFM01130.1| GMP synthase [Prevotella marshii DSM 16973]
          Length = 514

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 58/188 (30%), Gaps = 21/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS C +         +  +  D+G   K E         K++E    
Sbjct: 213 NDRVILGLSGGVDSSVCATLLNRAIGKNLTCIFVDHGMLRKNEY-------AKVMEAYRG 265

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              ++                +S      ++   +      + GR+ + +  A       
Sbjct: 266 LGLNVV------------GIDASKKFFTDLRGVTDPEEKRKIIGRDFVEVFNAEAKKIT- 312

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G    D           I++      L  E  + +  PL WL K E  ++ Q+
Sbjct: 313 DAKWLAQGTIYPDRIESLSITGMVIKSHHNVGGLPKEMKLRLCEPLQWLFKDEVRRVGQE 372

Query: 187 IGGQDLVN 194
           +G    + 
Sbjct: 373 LGMPQHLI 380


>gi|262306113|gb|ACY45649.1| gln amidotransferase [Streptocephalus seali]
          Length = 197

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 24/63 (38%), Gaps = 2/63 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               L+L SGG DS+ C +        D++  +  D G   K E+        ++   + 
Sbjct: 43  NQKVLVLVSGGVDSTVCAALLTRALNPDQLIAIHIDNGFLRKGEVTQVEKNLTRLGLKLK 102

Query: 66  KWK 68
             +
Sbjct: 103 VIR 105


>gi|172056478|ref|YP_001812938.1| GMP synthase, large subunit [Exiguobacterium sibiricum 255-15]
 gi|254800098|sp|B1YIZ1|GUAA_EXIS2 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|171988999|gb|ACB59921.1| GMP synthase, large subunit [Exiguobacterium sibiricum 255-15]
          Length = 514

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS   +       D++  +  D+G   K E      V K   +     
Sbjct: 220 KKVLCALSGGVDSSVVAALIHAAIGDQLTCMFVDHGLLRKGE---AESVMKTFADHFHMN 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       L  L  IS     + +                 ++ FL           
Sbjct: 277 VIKIDAQDRF-LNKLKGISDPEQKRKIIGNEFVYVFDEEASKLTDMDFLAQ--------- 326

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                 G   TD          TI++      L  +    +  P+  L K E  +L +++
Sbjct: 327 ------GTLYTDIIESGTDTAQTIKSHHNVGGLPEDMQFKLIEPINTLFKDEVRELGKEL 380

Query: 188 GGQDLV 193
           G  D +
Sbjct: 381 GLSDEI 386


>gi|167040416|ref|YP_001663401.1| PP-loop domain-containing protein [Thermoanaerobacter sp. X514]
 gi|300913703|ref|ZP_07131020.1| tRNA methyl transferase-like protein [Thermoanaerobacter sp. X561]
 gi|307723282|ref|YP_003903033.1| ATPase [Thermoanaerobacter sp. X513]
 gi|166854656|gb|ABY93065.1| PP-loop domain protein [Thermoanaerobacter sp. X514]
 gi|300890388|gb|EFK85533.1| tRNA methyl transferase-like protein [Thermoanaerobacter sp. X561]
 gi|307580343|gb|ADN53742.1| ATPase [Thermoanaerobacter sp. X513]
          Length = 297

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 34/125 (27%), Gaps = 11/125 (8%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
             ++      ++  SGG+DS             V     D G            V +   
Sbjct: 41  YKMLPPKGRVVVAISGGKDSLVTAYVLKKLGYEVLGFFIDLGITQNDFSPRSREVVENFC 100

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                      ++H +PL I+   +          K  D       V  R+++     A 
Sbjct: 101 -----------KEHDIPLEIVDLKAGYGKGIPEVAKKHDRICAICGVTKRHLMNEYTLAV 149

Query: 122 LAYRL 126
            A  L
Sbjct: 150 NADAL 154


>gi|317477931|ref|ZP_07937114.1| tRNA methyl transferase [Bacteroides sp. 4_1_36]
 gi|316905845|gb|EFV27616.1| tRNA methyl transferase [Bacteroides sp. 4_1_36]
          Length = 363

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 50/191 (26%), Gaps = 20/191 (10%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY--GQRNKVELECRLCVRKKIVE 62
           +K     LL  SGG DSS       +    V  ++F +         LE    +  K+  
Sbjct: 14  MKSDKRVLLGMSGGTDSSVAAMRLQEAGYEVTGVTFRFYEAGDETGYLEDARALALKLGM 73

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
               +                ++  S + +    +      P       N +     A +
Sbjct: 74  KHITY-------------DARELFRSRIIRYFVEEYLRGRTPVPCTVCNNELKWALLAKI 120

Query: 123 AYRLGITNIVIGVCETDY-SGYPDCRHDTIRAIETAINLGMESHVTVHTPLM----WLKK 177
           A   GI  I  G       SG            +            +   ++     + K
Sbjct: 121 ADEKGIYWISTGHYVRKVLSGGKYYIAPAADKDKDQTFFLWGLKQDILQRMLLPMGDITK 180

Query: 178 YETWKLAQDIG 188
            E    A + G
Sbjct: 181 NEARSYAAERG 191


>gi|21223164|ref|NP_628943.1| GMP synthase [Streptomyces coelicolor A3(2)]
 gi|256785738|ref|ZP_05524169.1| GMP synthase [Streptomyces lividans TK24]
 gi|289769630|ref|ZP_06529008.1| bifunctional GMP synthase/glutamine amidotransferase [Streptomyces
           lividans TK24]
 gi|13627139|sp|Q9L0H2|GUAA_STRCO RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|7320904|emb|CAB82024.1| GMP synthase [Streptomyces coelicolor A3(2)]
 gi|289699829|gb|EFD67258.1| bifunctional GMP synthase/glutamine amidotransferase [Streptomyces
           lividans TK24]
          Length = 526

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 53/187 (28%), Gaps = 18/187 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+   +        ++  +  D+G   K E E                 
Sbjct: 226 RAICGLSGGVDSAVAAALVQKAIGSQLTCVYVDHGLMRKGETEQVEK---------DFVA 276

Query: 69  DSLGEDHILPLA--ILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +  +  ++  +   LG ++  S  +     I    +         I+            
Sbjct: 277 ATGVQLKVVDASERFLGALAGVSDPEQKRKIIGREFIRVFEQAQLEIMREDGPEV----- 331

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +               I++      L  +    +  PL  L K E   + Q+
Sbjct: 332 -AFLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPDDIEFELVEPLRQLFKDEVRMVGQE 390

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 391 LGLPDEI 397


>gi|226225516|ref|YP_002759622.1| argininosuccinate synthase [Gemmatimonas aurantiaca T-27]
 gi|259585359|sp|C1A3S5|ASSY_GEMAT RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|226088707|dbj|BAH37152.1| argininosuccinate synthase [Gemmatimonas aurantiaca T-27]
          Length = 445

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 3/72 (4%)

Query: 1  MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M +I+++ P      + FSGG D+S  L W   +       + + GQ ++ + E      
Sbjct: 1  MANILQRLPIGEKVGIAFSGGLDTSAALHWMRAKGAVPYAYTANLGQPDESDYEEIPRKA 60

Query: 58 KKIVELMPKWKD 69
                  +  +
Sbjct: 61 MAYGAEKARLVE 72


>gi|71892171|ref|YP_277903.1| tRNA-specific 2-thiouridylase MnmA [Candidatus Blochmannia
          pennsylvanicus str. BPEN]
 gi|123640946|sp|Q492R5|MNMA_BLOPB RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|71796277|gb|AAZ41028.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Candidatus Blochmannia pennsylvanicus str. BPEN]
          Length = 367

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 23/72 (31%), Gaps = 2/72 (2%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS        +  +VE L     + +    +C       + +      
Sbjct: 7  KKVIVGMSGGVDSSVSAWLLQQQGYKVEGLFMKNWEDDDSTEQCAS--ASDLSDTHSVCD 64

Query: 69 DSLGEDHILPLA 80
          +     H +  +
Sbjct: 65 NLGIYLHTINFS 76


>gi|116619734|ref|YP_821890.1| tRNA-specific 2-thiouridylase MnmA [Candidatus Solibacter usitatus
           Ellin6076]
 gi|122255775|sp|Q02BG1|MNMA_SOLUE RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|116222896|gb|ABJ81605.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Solibacter usitatus Ellin6076]
          Length = 371

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/166 (12%), Positives = 51/166 (30%), Gaps = 11/166 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC-------RLCVR 57
           + + P A+ + SGG DSS   +  +     V  ++     + ++           R C  
Sbjct: 1   MPEQPIAVAM-SGGVDSSVVAAMLVREGRTVVGMTMQLWNQRRLPELAVEGATTGRCCSL 59

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
             + +     +      +++      +     + K    +      P       N I   
Sbjct: 60  DDVYDARRVAEQVGIPYYVVN---FEEQFEEHVVKPFVDEYLAGRTPIPCTLCNNYIKFD 116

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME 163
               +A  +G  ++  G            R+  +RA++ + +    
Sbjct: 117 RFLEMADSVGAYHMATGHYARIRHDEATGRYQLLRAVDDSKDQTYF 162


>gi|91762579|ref|ZP_01264544.1| Argininosuccinate synthase (Citrulline--aspartate ligase)
           [Candidatus Pelagibacter ubique HTCC1002]
 gi|91718381|gb|EAS85031.1| Argininosuccinate synthase  (Citrulline--aspartate ligase)
           [Candidatus Pelagibacter ubique HTCC1002]
          Length = 395

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 56/176 (31%), Gaps = 13/176 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +K     +L +SGG D+S  L W  + +D  V   + D GQ  +++ +  +   K++   
Sbjct: 1   MKSKKKIVLAYSGGLDTSIILKWLQENYDAEVICYTADVGQ--EIDRKKIIKNAKRLGVK 58

Query: 64  MPKW---KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                  KD+  +D++ P+     I         ++           +  R I       
Sbjct: 59  NIIIENLKDTFVKDYVFPMIRGHAIYEGVYLLGTSIARP-------LIAKRQIAAAKKFG 111

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
             A   G T         +   +       I A      L   + +  +     + 
Sbjct: 112 AYAVSHGSTGKGNDQVRFELGYHYFGPKVKIIAPWRIWKLNSRTDLIKYAKKNNIP 167


>gi|148265151|ref|YP_001231857.1| GMP synthase [Geobacter uraniireducens Rf4]
 gi|146398651|gb|ABQ27284.1| GMP synthase (glutamine-hydrolyzing) [Geobacter uraniireducens Rf4]
          Length = 516

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 54/187 (28%), Gaps = 18/187 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS           D++  +  + G   K E        +K+V L  K  
Sbjct: 221 RVLCALSGGVDSSVVAVLIHKAIGDQLHCVFVNNGLLRKGE-------AEKVVNLFSK-- 271

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   + L     +  S         + D       +    I      A    ++  
Sbjct: 272 -----HFRINLDY---VDASDRFLEKLSGVSDPETKRKIIGNEFIYLFEEEAKKIGKVDY 323

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   S         I++      L  + ++ +  P+  L K E   L +++G
Sbjct: 324 LAQGTLYPDVIESVSTKGPSAVIKSHHNVGGLPEKMNLKLLEPVRELFKDEVRLLGKELG 383

Query: 189 GQDLVNL 195
             D V  
Sbjct: 384 MPDEVIY 390


>gi|330955382|gb|EGH55642.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas syringae Cit 7]
          Length = 177

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 35/135 (25%), Gaps = 5/135 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS      +++  +VE L     + +     C    R+ + +      
Sbjct: 2   KRVIVGMSGGVDSSVSAVLLMEQGYQVEGLFMKNWEEDDGTEYC--TAREDLADAQAVCD 59

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + H        +   +     +             +  R  I        A  LG 
Sbjct: 60  KIGIKLHT--ANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFKAFLDYALMLGA 116

Query: 129 TNIVIGVCETDYSGY 143
             I  G         
Sbjct: 117 DLIATGHYVRRRDID 131


>gi|254166597|ref|ZP_04873451.1| GMP synthase, C-terminal domain [Aciduliprofundum boonei T469]
 gi|289596163|ref|YP_003482859.1| GMP synthase, large subunit [Aciduliprofundum boonei T469]
 gi|197624207|gb|EDY36768.1| GMP synthase, C-terminal domain [Aciduliprofundum boonei T469]
 gi|289533950|gb|ADD08297.1| GMP synthase, large subunit [Aciduliprofundum boonei T469]
          Length = 312

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 55/190 (28%), Gaps = 22/190 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A++  SGG DS+           D++  +  D G   K E +    +  ++        
Sbjct: 22  KAIIACSGGVDSTVAAVLVHKAIGDKLLAIFVDTGFMRKNEAKEIDGLFSRMGLNYKIV- 80

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                                 ++     ++    P          F+      A   G 
Sbjct: 81  --------------------DASREFIEALKGVEDPEKKRKIIGAKFIEVFEREAEEFGA 120

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G    D+        DTI++      L  + ++ +  PL  L K E  ++A+   
Sbjct: 121 EYLVQGTIAPDWIESGGGLRDTIKSHHNVGGLPEKMNLKLVEPLRELYKDEVREIARFFN 180

Query: 189 GQDLVNLILE 198
            +        
Sbjct: 181 LEIKERQPFP 190


>gi|218961454|ref|YP_001741229.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Cloacamonas acidaminovorans]
 gi|167730111|emb|CAO81023.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Cloacamonas acidaminovorans]
          Length = 382

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 56/205 (27%), Gaps = 18/205 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG------QRNKVELECRLCVRK 58
           ++K  S  +  SGG DS+       +   RV  ++           +            +
Sbjct: 1   MQKKTSVAVGISGGIDSAMTAYLLQESGYRVIGITMQTYDENIEMDKTLKSGCFGPAQEE 60

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
            I+     W+    E +I+P   L +     +             PN  +     I    
Sbjct: 61  NILSASLLWRKLGIEHYIIP---LQEEFRHKVIDYFCETYIKGKTPNPCLVCNAYIKFAL 117

Query: 119 AATLAYRLGITNIVIG--VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH------- 169
               A+ LG+                    R+   +A +   +                 
Sbjct: 118 LPEKAHSLGLEFDYFATGHYAKIGFNNTLKRYQIRKAKDANKDQSYFLAFLSQEQLAQTL 177

Query: 170 TPLMWLKKYETWKLAQDIGGQDLVN 194
            PL    K E  K+A   G  +LV 
Sbjct: 178 FPLGDYTKQEIKKMAIGKGFTELVE 202


>gi|2314503|gb|AAD08378.1| conserved hypothetical protein [Helicobacter pylori 26695]
          Length = 360

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 52/184 (28%), Gaps = 17/184 (9%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           N+ +K      +L SGG DSS       ++   +  +         ++L          +
Sbjct: 14  NERLKM--KIAVLLSGGVDSSYSAYSLKEQGHELVGIY--------LKLHASEKKHDLYI 63

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +   K  + LG    L +        S++        ++   PN       ++    A  
Sbjct: 64  KNAQKACEFLGIP--LEVLDFQKDFKSAVYDEFINAYEEGQTPNPCALCNPLMKFGLALD 121

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWLK 176
            A +LG   I  G                    T         L  E    +  PL  L 
Sbjct: 122 HALKLGCEKIATGHYARVKEIDKISYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLL 181

Query: 177 KYET 180
           K + 
Sbjct: 182 KKDI 185


>gi|319902815|ref|YP_004162543.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides helcogenes P 36-108]
 gi|319417846|gb|ADV44957.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides helcogenes P 36-108]
          Length = 354

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 49/177 (27%), Gaps = 7/177 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +L SGG DSS  +    ++  R        G+ +   ++C     + +       +    
Sbjct: 5   VLLSGGVDSSVVVHLLCEQGYRPSLFYIKIGKDDADYMDCA--AEEDLEIASAIARRYGL 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
              ++ L    +   +     +    +        +  + I F  F          T   
Sbjct: 63  PLEVVDLH--REYWDNVAAYAIDKISRGLTPNPDVMCNKLIKFGCFERRAGKDFDFTATG 120

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLAQD 186
                   +G            +    L    ++ V     PL  L K+E   +A  
Sbjct: 121 HYATTVLQTGKIWLGTAVDPVKDQTDFLAQIDYLQVSKLMFPLGGLMKHEVRDIALR 177


>gi|296192066|ref|XP_002743906.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1
           [Callithrix jacchus]
          Length = 421

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/113 (12%), Positives = 30/113 (26%), Gaps = 9/113 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--------QRNKVELECRLCV 56
           ++ A   +   SGG DS+        R  +V  +                  + E    V
Sbjct: 1   MQAARHVVCALSGGVDSAVAALLLKRRGYQVTGVFMKNWDLLDEHGVCAADKDCEDAYRV 60

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
            + +     +    + E      +   +      T N  +    +   + F  
Sbjct: 61  CQILDLPFRQVS-YVKEYWNDVFSDFLNEYEKGRTPNPDIICNKHIKFSCFFR 112


>gi|296124260|ref|YP_003632038.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Planctomyces limnophilus DSM 3776]
 gi|296016600|gb|ADG69839.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Planctomyces limnophilus DSM 3776]
          Length = 392

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 58/204 (28%), Gaps = 19/204 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE---------LE 51
           M   + K    +L  SGG DSS        +   V  L    G+ +              
Sbjct: 1   MGYGMSK-ERVVLAMSGGVDSSVAAVLLQQQGYEVIGLFMRSGEASASACSLPPSGLLPV 59

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD---NNLPNTFV 108
                 K+         D+     +L +         S  +  +    +      PN  V
Sbjct: 60  IERKSHKQGCCSAADAADAQRVADLLDIPFHALNFRDSFDQIKSYFADEYLKGRTPNPCV 119

Query: 109 PGRNIIFLVFAATLAYRLGITNI----VIGVCETDYSGYPDCRHDTIRAIETAINLGMES 164
                +        A ++G T I       + + ++      R   +   ++ +  G+  
Sbjct: 120 MCNVWLKFGRLWEFAQQVGATRIATGHYARIIQDEFGQTRLMRGADLSKDQSYVLFGIRP 179

Query: 165 HV--TVHTPLMWLKKYETWKLAQD 186
            +   +  P+    K E  ++A  
Sbjct: 180 DILSKILFPVGHQPKAEIREIAAQ 203


>gi|205822104|sp|Q65VV2|MNMA_MANSM RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 389

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 52/188 (27%), Gaps = 9/188 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 27  NAKKKVIVGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 83

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     +A            +  + I F  F    A  
Sbjct: 84  AVADKLG-MKLHKINFAAEYWDNVFEHFLAEYKAGRTPNPDILCNKEIKFKAFLEYAAED 142

Query: 126 LGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           LG   I  G          + R                 L  +       P+  ++K   
Sbjct: 143 LGADYIATGHYVRRRGDDENARLLRGLDSNKDQSYFLYTLSHKQVGQSLFPVGDIEKPIV 202

Query: 181 WKLAQDIG 188
             +A+D+G
Sbjct: 203 RAIAEDLG 210


>gi|304392676|ref|ZP_07374616.1| argininosuccinate synthase [Ahrensia sp. R2A130]
 gi|303295306|gb|EFL89666.1| argininosuccinate synthase [Ahrensia sp. R2A130]
          Length = 417

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 52/162 (32%), Gaps = 3/162 (1%)

Query: 1   MNDIIK-KAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRK 58
           M  I K      +L +SGG D+S  L W   +    V T + D GQ +++E    L   K
Sbjct: 1   MAKIKKGDVKKVVLAYSGGLDTSIILKWLQTEYGAEVVTFTADLGQ-SEIEGGKELEEAK 59

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
           +  E +   +  + +     +         +      + +   ++    +  R I     
Sbjct: 60  RKAENLGITEIYIEDVREEFIRDFVFPMFRANAVYEGVYLLGTSIARPLISKRLIEIARE 119

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
               A   G T         + + Y       + A     +L
Sbjct: 120 TGADAIAHGATGKGNDQVRFELAAYALDPDIKVIAPWREWDL 161


>gi|257897740|ref|ZP_05677393.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium Com15]
 gi|257835652|gb|EEV60726.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium Com15]
          Length = 373

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 48/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MTD--NSQTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAKVAAQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYAMDLGADYVATGHYAQVTRDENGVVHMLRGVDNNKDQTYFLSQLSQEQLSKTMFPLGG 173

Query: 175 LKKYETWKLAQDIG 188
           ++K E   +A+  G
Sbjct: 174 MEKSEVRAIAERAG 187


>gi|257886541|ref|ZP_05666194.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium 1,141,733]
 gi|257822595|gb|EEV49527.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium 1,141,733]
          Length = 373

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 48/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MTD--NSQTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAKVAAQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYAMDLGADYVATGHYAQVTRDENGVVHMLRGVDNNKDQTYFLSQLSQEQLSKTMFPLGG 173

Query: 175 LKKYETWKLAQDIG 188
           ++K E   +A+  G
Sbjct: 174 MEKSEVRAIAERAG 187


>gi|227552294|ref|ZP_03982343.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium TX1330]
 gi|257895129|ref|ZP_05674782.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium Com12]
 gi|293377883|ref|ZP_06624064.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium PC4.1]
 gi|227178565|gb|EEI59537.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium TX1330]
 gi|257831694|gb|EEV58115.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium Com12]
 gi|292643430|gb|EFF61559.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecium PC4.1]
          Length = 373

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 48/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MTD--NSQTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAKVAAQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYAMDLGADYVATGHYAQVTRDENGVVHMLRGVDNNKDQTYFLSQLSQEQLSKTMFPLGG 173

Query: 175 LKKYETWKLAQDIG 188
           ++K E   +A+  G
Sbjct: 174 MEKSEVRAIAERAG 187


>gi|324991889|gb|EGC23812.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus sanguinis SK405]
 gi|324996221|gb|EGC28131.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus sanguinis SK678]
 gi|327458514|gb|EGF04864.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus sanguinis SK1]
 gi|327471584|gb|EGF17027.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus sanguinis SK408]
 gi|327490314|gb|EGF22101.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus sanguinis SK1058]
          Length = 373

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 49/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYALTLGADYVATGHYAQVKRDKDGLVHMLRGKDNNKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E   +A+  G
Sbjct: 174 LEKPEVRAIAERAG 187


>gi|319746158|gb|EFV98430.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus agalactiae ATCC 13813]
          Length = 397

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 50/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 25  MTD--NSNIRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDY 80

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 81  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 137

Query: 121 TLAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 138 DYAMTLGADYVATGHYAQVTRDKNGIVHMLRGVDNNKDQTYFLSQLSQEQLQKTLFPLGH 197

Query: 175 LKKYETWKLAQDIG 188
           L+K E  ++A++ G
Sbjct: 198 LQKPEVRRIAEEAG 211


>gi|225873266|ref|YP_002754725.1| (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acidobacterium capsulatum ATCC 51196]
 gi|259495822|sp|C1F792|MNMA_ACIC5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|225792803|gb|ACO32893.1| (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acidobacterium capsulatum ATCC 51196]
          Length = 374

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 47/167 (28%), Gaps = 11/167 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRN-------KVELECRLCV 56
           +    +  +  SGG DSST  +   +    +  L+   + QR           ++ R C 
Sbjct: 1   MSFNNTVAVAMSGGVDSSTVAAMLREEGYDLIGLTLQLWNQRRLAGKDGMPEPVQGRCCS 60

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
              + +     +      +++      +   S + +    +      P       N +  
Sbjct: 61  IDDVYDARRVAETLGIPYYLVNE---QERFESDVVRPFVSEYLHGRTPIPCSLCNNHLKF 117

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME 163
                 A + G   I  G    +       R    R  + + +    
Sbjct: 118 DQLLLRARQFGADRIATGHYARNEYDPARGRWILKRPADRSKDQTWF 164


>gi|160888582|ref|ZP_02069585.1| hypothetical protein BACUNI_00999 [Bacteroides uniformis ATCC 8492]
 gi|156861896|gb|EDO55327.1| hypothetical protein BACUNI_00999 [Bacteroides uniformis ATCC 8492]
          Length = 350

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 50/191 (26%), Gaps = 20/191 (10%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY--GQRNKVELECRLCVRKKIVE 62
           +K     LL  SGG DSS       +    V  ++F +         LE    +  K+  
Sbjct: 1   MKSDKRVLLGMSGGTDSSVAAMRLQEAGYEVTGVTFRFYEAGDETGYLEDARALALKLGM 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
               +                ++  S + +    +      P       N +     A +
Sbjct: 61  KHITY-------------DARELFRSRIIRYFVEEYLRGRTPVPCTVCNNELKWALLAKI 107

Query: 123 AYRLGITNIVIGVCETDY-SGYPDCRHDTIRAIETAINLGMESHVTVHTPLM----WLKK 177
           A   GI  I  G       SG            +            +   ++     + K
Sbjct: 108 ADEKGIYWISTGHYVRKVLSGGKYYIAPAADKDKDQTFFLWGLKQDILQRMLLPMGDITK 167

Query: 178 YETWKLAQDIG 188
            E    A + G
Sbjct: 168 NEARSYAAERG 178


>gi|52424356|ref|YP_087493.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mannheimia succiniciproducens MBEL55E]
 gi|52306408|gb|AAU36908.1| TrmU protein [Mannheimia succiniciproducens MBEL55E]
          Length = 400

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 52/188 (27%), Gaps = 9/188 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 38  NAKKKVIVGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 94

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     +A            +  + I F  F    A  
Sbjct: 95  AVADKLG-MKLHKINFAAEYWDNVFEHFLAEYKAGRTPNPDILCNKEIKFKAFLEYAAED 153

Query: 126 LGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           LG   I  G          + R                 L  +       P+  ++K   
Sbjct: 154 LGADYIATGHYVRRRGDDENARLLRGLDSNKDQSYFLYTLSHKQVGQSLFPVGDIEKPIV 213

Query: 181 WKLAQDIG 188
             +A+D+G
Sbjct: 214 RAIAEDLG 221


>gi|18976645|ref|NP_578002.1| n-type ATP pyrophosphatase superfamily protein [Pyrococcus furiosus
           DSM 3638]
 gi|18892216|gb|AAL80397.1| n-type ATP pyrophosphatase superfamily [Pyrococcus furiosus DSM
           3638]
          Length = 283

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 55/203 (27%), Gaps = 24/203 (11%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
             +  K    L+  SGG+DS+           ++E L  + G     E        KK  
Sbjct: 23  YKLASKDERILVAVSGGKDSAVTAYVLKKLGYKIECLHLNLGIGEYSE--KSEIYAKKQC 80

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           E +     ++     L    +G++  S  T                     +        
Sbjct: 81  EFIG-APLNIIRVKELLGYGIGEVRTSRPT----------------CSYCGLTKRYIMNK 123

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIR----AIETAINLGMESHVTVHTPLMWLKK 177
            AY  G   +  G    D + +             A    +  G    V    PL  L +
Sbjct: 124 FAYDNGFDAVATGHNLDDEASFLMNNLLHWNTEYLAKGGPLLPGEGKFVKKIKPLYELTE 183

Query: 178 YETWKLAQDIGGQDLVNL-ILEE 199
            E    A  +G + +V       
Sbjct: 184 REVVAYAIAVGLEYIVEECPYAR 206


>gi|76801631|ref|YP_326639.1| GMP synthase subunit B [Natronomonas pharaonis DSM 2160]
 gi|121695540|sp|Q3IS14|GUAAB_NATPD RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
           AltName: Full=GMP synthetase
 gi|76557496|emb|CAI49076.1| GMP synthase (glutamine-hydrolyzing), subunit B [Natronomonas
           pharaonis DSM 2160]
          Length = 305

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 56/179 (31%), Gaps = 28/179 (15%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A++  SGG DSST  + A +   D++  +  D G   K E            + +    D
Sbjct: 24  AVIALSGGVDSSTAAALAYEAIGDQLTPVYVDTGLMRKGET-----------DQIRDTFD 72

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +    I+        + S +T     +                  +    T+A  +   
Sbjct: 73  YMDSLRIIDARDRFLDALSGITDPEEKRHAIGEQF-----------IREFETVARDVDAD 121

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-VHTPLMWLKKYETWKLAQDI 187
            +V                 TI++      L        +  P+  L K E  ++A+++
Sbjct: 122 YLVQ----GTIYPDRIESEGTIKSHHNVGGLPEVVDFEGIVEPMRDLYKDEVREVAREL 176


>gi|114566689|ref|YP_753843.1| hypothetical protein Swol_1163 [Syntrophomonas wolfei subsp.
          wolfei str. Goettingen]
 gi|114337624|gb|ABI68472.1| conserved hypothetical protein [Syntrophomonas wolfei subsp.
          wolfei str. Goettingen]
          Length = 328

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
           A+ LFSGG DS    +    +   V  ++F
Sbjct: 2  KAVCLFSGGLDSQLAAALVKKQGVTVIGVNF 32


>gi|218891213|ref|YP_002440079.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas aeruginosa LESB58]
 gi|226704774|sp|B7UV15|MNMA_PSEA8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|218771438|emb|CAW27205.1| tRNA methyltransferase [Pseudomonas aeruginosa LESB58]
          Length = 375

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 51/195 (26%), Gaps = 12/195 (6%)

Query: 1   MNDI--IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           M++     +    ++  SGG DSS      L +  +VE L       +     C    R+
Sbjct: 1   MSESAPTPRRERVIVGMSGGVDSSVSALLLLQQGYQVEGLFMKNWDEDDGTEYC--TARE 58

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
            + +          + H        +   +     +A            +  R  I    
Sbjct: 59  DLADAQAVCDRIGIKLHT--ANFAAEYWDNVFEHFLAEYKAGRTPNPDILCNRE-IKFKA 115

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLM 173
               A  LG   I  G                              +G E       P+ 
Sbjct: 116 FLDYALMLGADLIATGHYVRRRDRDGRTELLKGLDPNKDQSYFLHAVGGEQIARSLFPVG 175

Query: 174 WLKKYETWKLAQDIG 188
            L+K E   +A+  G
Sbjct: 176 ELEKPEVRAIAEKHG 190


>gi|254241058|ref|ZP_04934380.1| tRNA methyltransferase [Pseudomonas aeruginosa 2192]
 gi|126194436|gb|EAZ58499.1| tRNA methyltransferase [Pseudomonas aeruginosa 2192]
          Length = 375

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 51/195 (26%), Gaps = 12/195 (6%)

Query: 1   MNDI--IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           M++     +    ++  SGG DSS      L +  +VE L       +     C    R+
Sbjct: 1   MSESAPTPRRERVIVGMSGGVDSSVSALLLLQQGYQVEGLFMKNWDEDDGTEYC--TARE 58

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
            + +          + H        +   +     +A            +  R  I    
Sbjct: 59  DLADAQAVCDRIGIKLHT--ANFAAEYWDNVFEHFLAEYKAGRTPNPDILCNRE-IKFKA 115

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLM 173
               A  LG   I  G                              +G E       P+ 
Sbjct: 116 FLDYALMLGADLIATGHYVRRRDRDGRTELLKGLDPNKDQSYFLHAVGGEQIARSLFPVG 175

Query: 174 WLKKYETWKLAQDIG 188
            L+K E   +A+  G
Sbjct: 176 ELEKPEVRAIAEKHG 190


>gi|15597822|ref|NP_251316.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas aeruginosa PAO1]
 gi|107102147|ref|ZP_01366065.1| hypothetical protein PaerPA_01003197 [Pseudomonas aeruginosa PACS2]
 gi|116050613|ref|YP_790568.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|14195276|sp|Q9I0L2|MNMA_PSEAE RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|122259736|sp|Q02NB8|MNMA_PSEAB RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|9948693|gb|AAG06014.1|AE004691_5 tRNA methyltransferase [Pseudomonas aeruginosa PAO1]
 gi|115585834|gb|ABJ11849.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 375

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 51/195 (26%), Gaps = 12/195 (6%)

Query: 1   MNDI--IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           M++     +    ++  SGG DSS      L +  +VE L       +     C    R+
Sbjct: 1   MSESAPTPRRERVIVGMSGGVDSSVSALLLLQQGYQVEGLFMKNWDEDDGTEYC--TARE 58

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
            + +          + H        +   +     +A            +  R  I    
Sbjct: 59  DLADAQAVCDRIGIKLHT--ANFAAEYWDNVFEHFLAEYKAGRTPNPDILCNRE-IKFKA 115

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLM 173
               A  LG   I  G                              +G E       P+ 
Sbjct: 116 FLDYALMLGADLIATGHYVRRRDRDGRTELLKGLDPNKDQSYFLHAVGGEQIARSLFPVG 175

Query: 174 WLKKYETWKLAQDIG 188
            L+K E   +A+  G
Sbjct: 176 ELEKPEVRAIAEKHG 190


>gi|330810455|ref|YP_004354917.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327378563|gb|AEA69913.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 374

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 33/136 (24%), Gaps = 5/136 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS      +++   VE L     + +     C       + +     
Sbjct: 11  KKRVIVGMSGGVDSSVSALLLIEQGYEVEGLFMKNWEEDDGTEYC--TAMDDLADAQAVC 68

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                + H        +   +     +A            +  R  I        A  LG
Sbjct: 69  DKIGIKLHT--ANFAAEYWDNVFEHFLAEYKAGRTPNPDILCNRE-IKFKAFLDYAMMLG 125

Query: 128 ITNIVIGVCETDYSGY 143
              I  G         
Sbjct: 126 ADLIATGHYVRRRDID 141


>gi|288559923|ref|YP_003423409.1| PP-loop family protein [Methanobrevibacter ruminantium M1]
 gi|288542633|gb|ADC46517.1| PP-loop family protein [Methanobrevibacter ruminantium M1]
          Length = 359

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
          I+K      L FS G DS+     A +    V  +++D     +  LE       ++   
Sbjct: 13 ILKDYKKIALAFSAGADSTLLAYLAKESDCDVLAITYDNQIFPEGFLEFAKRRADELGIK 72

Query: 64 MPKWKDSL 71
              ++S 
Sbjct: 73 HEIIENSF 80


>gi|257790697|ref|YP_003181303.1| GMP synthase, large subunit [Eggerthella lenta DSM 2243]
 gi|257474594|gb|ACV54914.1| GMP synthase, large subunit [Eggerthella lenta DSM 2243]
          Length = 535

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 50/185 (27%), Gaps = 12/185 (6%)

Query: 8   APSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +L  SGG DSS   +  A     ++  +  ++G   K E E          E+   
Sbjct: 221 SDRVILGLSGGVDSSVVAALCAKAIGKQLTCVFINHGLLRKNEPE----------EVEDV 270

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +      D +   A     +  +       K +                L         L
Sbjct: 271 FTKQFDVDFVHVHAEDRYAALLADVVEPEQKRRIIGSQFWKEFFAVAEELAEGGRPVKYL 330

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                +        +     +  TI++    I      H  +  PL    K E   L   
Sbjct: 331 -AQGTIYPDIIESGARKTGGKASTIKSHHNLIPFPDGVHFDLIEPLDHFFKDEVRALGTA 389

Query: 187 IGGQD 191
           +G  D
Sbjct: 390 LGLPD 394


>gi|188585551|ref|YP_001917096.1| argininosuccinate synthase [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179350238|gb|ACB84508.1| argininosuccinate synthase [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 404

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 56/210 (26%), Gaps = 27/210 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + K    +L +SGG D+S  + W  +++   V  +  D GQ+   ++E            
Sbjct: 1   MSKINKVVLAYSGGLDTSVAIKWIQEQYDCEVIAMIGDVGQK--EDVEAAEQKAYDTGA- 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + ++L E+ +                 +   I               +       +A
Sbjct: 58  SKVYVENLQEEFVTDYIY----------PAMKANIMYEGKYLLGTAICRPLLGKKLVEIA 107

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            +     I  G                  A   +I +       +          +  K 
Sbjct: 108 LQENADAIAHGCTGKGNDQVRFEMAVKAMAPHLSI-IAPWREWDIKGRE------DAVKY 160

Query: 184 AQDIGGQDLVNLILEES------HTCYLGK 207
           A   G    V   +  S      H+ Y G 
Sbjct: 161 ANKYGIPVPVTKEMPYSIDRNLFHSSYEGG 190


>gi|148558733|ref|YP_001257376.1| GMP synthase [Brucella ovis ATCC 25840]
 gi|226738395|sp|A5VU71|GUAA_BRUO2 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|148370018|gb|ABQ62890.1| GMP synthase [Brucella ovis ATCC 25840]
          Length = 520

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 59/185 (31%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DSS     A +   D++  +  D+G   K E        +++VE+   
Sbjct: 222 SGKVICALSGGVDSSVAALLAHEAVGDQLTCILVDHGLMRKDE-------AQQVVEMFR- 273

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 E + LPL ++                +        +              A  L
Sbjct: 274 ------EHYNLPLILVDASDRFIGALESESDPEKKRKTIGRLFIEVFEEEARKLGGADFL 327

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+    +      TI++      L     + +  PL  L K E   L ++
Sbjct: 328 VQGTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMKMQLVEPLRELFKDEVRLLGKE 385

Query: 187 IGGQD 191
           +G  D
Sbjct: 386 LGLPD 390


>gi|325202116|gb|ADY97570.1| tRNA(Ile)-lysidine synthase [Neisseria meningitidis M01-240149]
          Length = 426

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/196 (11%), Positives = 45/196 (22%), Gaps = 31/196 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELM 64
               +  SGG DS   L   +    +     + L   +G                     
Sbjct: 12  KKTAVALSGGLDSVVLLHLLVRAGKKGGFIPDALHIHHG-----LSPRADDWADFCQNYC 66

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L    I        I  ++  K  A   +           R+     F   +A 
Sbjct: 67  DMLGVGLETVKICVEKNGLGIEAAARQKRYAAFAEKGFDVLALAHHRDDQIETFMLAVAR 126

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G+  +        +                           +  PL+   + + W  A
Sbjct: 127 GGGLRALAAMPAVRPFGEKGI----------------------IWRPLLPFSRQDIWDYA 164

Query: 185 QDIGGQDLVNLILEES 200
           Q  G  ++ +    ++
Sbjct: 165 QKHGLPNIEDESNSDT 180


>gi|317473498|ref|ZP_07932790.1| GMP synthase domain-containing protein [Anaerostipes sp. 3_2_56FAA]
 gi|316899009|gb|EFV21031.1| GMP synthase domain-containing protein [Anaerostipes sp. 3_2_56FAA]
          Length = 513

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 54/187 (28%), Gaps = 21/187 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS            ++  +  D+G   K E +    V            
Sbjct: 217 KVLCALSGGVDSSVAAVMLAKAVGKQLTCVFVDHGLLRKNEGDEVEAV------------ 264

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G +    L  +         + +A   +               F+      A ++G 
Sbjct: 265 --FGPEGPYDLNFIRVNVQDRFYEKLAGVEEPEQKRKII----GEEFIRVFEEEAKKIGS 318

Query: 129 -TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLAQD 186
              +V G    D       +  TI++      L        +  PL  L K E  +  ++
Sbjct: 319 VDFLVQGTIYPDVVESGVGKSATIKSHHNVGGLPDYVDFKEIIEPLRDLFKDEVRQAGRE 378

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 379 LGIPEYL 385


>gi|295706703|ref|YP_003599778.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus megaterium DSM 319]
 gi|294804362|gb|ADF41428.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus megaterium DSM 319]
          Length = 370

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 49/192 (25%), Gaps = 12/192 (6%)

Query: 4   IIKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           + K       ++  SGG DSS        +   V  +             C     +   
Sbjct: 1   MTKSPKDTRVVVGMSGGVDSSVAALLLKQQGYDVIGIFMKNWDDTDENGVC--TATEDYN 58

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +++          + +             T  +             +     I       
Sbjct: 59  DVIRVCNQIGIPYYAVN--FEKQYWDKVFTYFLDEYKAGRTPNPDVMC-NKEIKFKAFLE 115

Query: 122 LAYRLGITNIVIGVCETDYS---GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLK 176
            A  LG   +  G           Y   R       +T     LG +    V  P+  ++
Sbjct: 116 HAMTLGADYLATGHYARVAYRDGEYKMLRGVDGNKDQTYFLNQLGQDQLSKVMFPIGEIE 175

Query: 177 KYETWKLAQDIG 188
           K +  ++A++ G
Sbjct: 176 KSKVREIAKEAG 187


>gi|294501356|ref|YP_003565056.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus megaterium QM B1551]
 gi|294351293|gb|ADE71622.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus megaterium QM B1551]
          Length = 370

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 49/192 (25%), Gaps = 12/192 (6%)

Query: 4   IIKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           + K       ++  SGG DSS        +   V  +             C     +   
Sbjct: 1   MTKSPKDTRVVVGMSGGVDSSVAALLLKQQGYDVIGIFMKNWDDTDENGVC--TATEDYN 58

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +++          + +             T  +             +     I       
Sbjct: 59  DVIRVCNQIGIPYYAVN--FEKQYWDKVFTYFLDEYKAGRTPNPDVMC-NKEIKFKAFLE 115

Query: 122 LAYRLGITNIVIGVCETDYS---GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLK 176
            A  LG   +  G           Y   R       +T     LG +    V  P+  ++
Sbjct: 116 HAMTLGADYLATGHYARVAYRDGEYKMLRGVDGNKDQTYFLNQLGQDQLSKVMFPIGEIE 175

Query: 177 KYETWKLAQDIG 188
           K +  ++A++ G
Sbjct: 176 KSKVREIAKEAG 187


>gi|225853749|ref|YP_002735261.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pneumoniae JJA]
 gi|254811466|sp|C1CBU0|MNMA_STRZJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|225723263|gb|ACO19116.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pneumoniae JJA]
          Length = 373

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 51/194 (26%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D  K     ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +++          + +            + +    + +    PN  V     I      
Sbjct: 57  KDVVAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMW 174
             A  LG   +  G             H                 L  E       PL  
Sbjct: 114 DYAITLGADYVATGHYARVVRDEDGTVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  KLA++ G
Sbjct: 174 LEKPEVRKLAEEAG 187


>gi|167747719|ref|ZP_02419846.1| hypothetical protein ANACAC_02440 [Anaerostipes caccae DSM 14662]
 gi|167653081|gb|EDR97210.1| hypothetical protein ANACAC_02440 [Anaerostipes caccae DSM 14662]
          Length = 513

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 54/187 (28%), Gaps = 21/187 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS            ++  +  D+G   K E +    V            
Sbjct: 217 KVLCALSGGVDSSVAAVMLAKAVGKQLTCVFVDHGLLRKNEGDEVEAV------------ 264

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G +    L  +         + +A   +               F+      A ++G 
Sbjct: 265 --FGPEGPYDLNFIRVNVQDRFYEKLAGVEEPEQKRKII----GEEFIRVFEEEAKKIGS 318

Query: 129 -TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLAQD 186
              +V G    D       +  TI++      L        +  PL  L K E  +  ++
Sbjct: 319 VDFLVQGTIYPDVVESGVGKSATIKSHHNVGGLPDYVDFKEIIEPLRDLFKDEVRQAGRE 378

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 379 LGIPEYL 385


>gi|121602703|ref|YP_989608.1| argininosuccinate synthase [Bartonella bacilliformis KC583]
 gi|166219947|sp|A1UUF5|ASSY_BARBK RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|120614880|gb|ABM45481.1| argininosuccinate synthase [Bartonella bacilliformis KC583]
          Length = 407

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 53/182 (29%), Gaps = 12/182 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
           MN         +L +SGG D+S  L W        V T + D GQ    ELE      + 
Sbjct: 1   MNKWTD-VKKVVLAYSGGLDTSIILKWLQSELGAEVVTFTADLGQ--GEELESARRKAEI 57

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +  +   + + L E+ +            +      + +   ++    +  R I      
Sbjct: 58  MG-IKEIYIEDLREEFVRDFVF---PMFRANAVYEGVYLLGTSIARPLISKRLIEIAKET 113

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV----TVHTPLMWL 175
              A   G T         + S Y       I A          + +     VH   +  
Sbjct: 114 GADAIAHGATGKGNDQVRFELSAYALDPDIKIIAPWRDWTFKSRTDLIEFARVHQIPVEK 173

Query: 176 KK 177
            K
Sbjct: 174 DK 175


>gi|167038045|ref|YP_001665623.1| NAD+ synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|167040910|ref|YP_001663895.1| NAD+ synthetase [Thermoanaerobacter sp. X514]
 gi|300914946|ref|ZP_07132262.1| NAD+ synthetase [Thermoanaerobacter sp. X561]
 gi|307723820|ref|YP_003903571.1| NAD+ synthetase [Thermoanaerobacter sp. X513]
 gi|320116454|ref|YP_004186613.1| NAD+ synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1]
 gi|166855150|gb|ABY93559.1| NAD+ synthetase [Thermoanaerobacter sp. X514]
 gi|166856879|gb|ABY95287.1| NAD+ synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|300889881|gb|EFK85027.1| NAD+ synthetase [Thermoanaerobacter sp. X561]
 gi|307580881|gb|ADN54280.1| NAD+ synthetase [Thermoanaerobacter sp. X513]
 gi|319929545|gb|ADV80230.1| NAD+ synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1]
          Length = 543

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/193 (9%), Positives = 47/193 (24%), Gaps = 2/193 (1%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             A++  SGG DS+   + A++    + V  +S      ++        +   +      
Sbjct: 288 KKAVVGLSGGIDSAVVCAIAVEALGKENVLAVSMPSRYSSEGSKSDARILADNLGIEFRV 347

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     L +    +     L +         N           I L         +
Sbjct: 348 IPIEPVFKSYLSVFNGDNNVIGDLAEENIQARIRGNYLMFISNREGHIVLTTGNKSELAM 407

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   +   +  +        +                  +++       +     K    
Sbjct: 408 GYCTLYGDMSGSLAPIADVPKTMVYDLARFINREREIIPISIIEKAPSAELRPNQKDEDS 467

Query: 187 IGGQDLVNLILEE 199
           +    +++ IL+ 
Sbjct: 468 LPPYKILDEILKM 480


>gi|306822887|ref|ZP_07456263.1| GMP synthase [Bifidobacterium dentium ATCC 27679]
 gi|309801283|ref|ZP_07695412.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Bifidobacterium dentium JCVIHMP022]
 gi|304553519|gb|EFM41430.1| GMP synthase [Bifidobacterium dentium ATCC 27679]
 gi|308222172|gb|EFO78455.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Bifidobacterium dentium JCVIHMP022]
          Length = 520

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 55/184 (29%), Gaps = 11/184 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+   +       D++  +  D+G   K E      VR   VE       
Sbjct: 218 VICGLSGGVDSAVAAALVHKAIGDQLTCVFVDHGLLRKGE---AEQVRHDFVEATGIKLI 274

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++          L  +   S  +     I +  +       R +I    A+    +    
Sbjct: 275 AVDA----SEDFLTALKGVSEPEKKRKIIGEKFIRTFEKAQRQVIEEAGASGKEVK---F 327

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +    +  PL  L K E   +  ++G 
Sbjct: 328 LVQGTLYPDVVESGGGDGAANIKSHHNVGGLPDDIKFQLVEPLRTLFKDEVRAIGTELGL 387

Query: 190 QDLV 193
            D +
Sbjct: 388 PDEI 391


>gi|307728482|ref|YP_003905706.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia sp. CCGE1003]
 gi|307583017|gb|ADN56415.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia sp. CCGE1003]
          Length = 385

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 30/131 (22%), Gaps = 5/131 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS       ++   V  L     + +     C         + +   
Sbjct: 3   KQKVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDSEYCSTRQ-----DWIDVV 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +      +            +      +      PN  V     I        A  LG
Sbjct: 58  SVADLIGIDVEAVNFASEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLG 117

Query: 128 ITNIVIGVCET 138
              I  G    
Sbjct: 118 AETIATGHYAR 128


>gi|323524770|ref|YP_004226923.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia sp. CCGE1001]
 gi|323381772|gb|ADX53863.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia sp. CCGE1001]
          Length = 381

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 30/131 (22%), Gaps = 5/131 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS       ++   V  L     + +     C         + +   
Sbjct: 3   KQKVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDSEYCSTRQ-----DWIDVV 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +      +            +      +      PN  V     I        A  LG
Sbjct: 58  SVADLIGIDVEAVNFASEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLG 117

Query: 128 ITNIVIGVCET 138
              I  G    
Sbjct: 118 AETIATGHYAR 128


>gi|300770183|ref|ZP_07080062.1| possible argininosuccinate synthase [Sphingobacterium
          spiritivorum ATCC 33861]
 gi|300762659|gb|EFK59476.1| possible argininosuccinate synthase [Sphingobacterium
          spiritivorum ATCC 33861]
          Length = 394

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 25/75 (33%), Gaps = 1/75 (1%)

Query: 9  PSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             +L FSGG D S  C+    D    V ++  + G  +  EL        ++       
Sbjct: 2  KKVVLAFSGGLDTSFCCIYLTRDLGLEVHSVIVNTGGFSAEELATIEKRAYELGVKSHAV 61

Query: 68 KDSLGEDHILPLAIL 82
           D     +   +  L
Sbjct: 62 VDETENYYRDSIKYL 76


>gi|227538644|ref|ZP_03968693.1| possible argininosuccinate synthase [Sphingobacterium
          spiritivorum ATCC 33300]
 gi|227241563|gb|EEI91578.1| possible argininosuccinate synthase [Sphingobacterium
          spiritivorum ATCC 33300]
          Length = 394

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 25/75 (33%), Gaps = 1/75 (1%)

Query: 9  PSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             +L FSGG D S  C+    D    V ++  + G  +  EL        ++       
Sbjct: 2  KKVVLAFSGGLDTSFCCIYLTRDLGLEVHSVIVNTGGFSAEELATIEKRAYELGVKSHAV 61

Query: 68 KDSLGEDHILPLAIL 82
           D     +   +  L
Sbjct: 62 VDETENYYRDSIKYL 76


>gi|171743082|ref|ZP_02918889.1| hypothetical protein BIFDEN_02208 [Bifidobacterium dentium ATCC
           27678]
 gi|283455908|ref|YP_003360472.1| GMP synthase glutamine amidotransferase [Bifidobacterium dentium
           Bd1]
 gi|171278696|gb|EDT46357.1| hypothetical protein BIFDEN_02208 [Bifidobacterium dentium ATCC
           27678]
 gi|283102542|gb|ADB09648.1| GMP synthase glutamine amidotransferase [Bifidobacterium dentium
           Bd1]
          Length = 520

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 55/184 (29%), Gaps = 11/184 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+   +       D++  +  D+G   K E      VR   VE       
Sbjct: 218 VICGLSGGVDSAVAAALVHKAIGDQLTCVFVDHGLLRKGE---AEQVRHDFVEATGIKLI 274

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++          L  +   S  +     I +  +       R +I    A+    +    
Sbjct: 275 AVDA----SEDFLTALKGVSEPEKKRKIIGEKFIRTFEKAQRQVIEEAGASGKEVK---F 327

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +    +  PL  L K E   +  ++G 
Sbjct: 328 LVQGTLYPDVVESGGGDGAANIKSHHNVGGLPDDIKFQLVEPLRTLFKDEVRAIGTELGL 387

Query: 190 QDLV 193
            D +
Sbjct: 388 PDEI 391


>gi|157813136|gb|ABV81313.1| putative GMP synthetase [Limulus polyphemus]
          Length = 196

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 23/64 (35%), Gaps = 2/64 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDR-VETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              L+L SGG DS+ C +       +  V  +  + G   K E        +++   +  
Sbjct: 44  KKVLMLVSGGVDSTVCAALVHRALGEERVIAIHVNNGFMRKNESLQVEHSLRQLGLKLRV 103

Query: 67  WKDS 70
              S
Sbjct: 104 VDAS 107


>gi|99081216|ref|YP_613370.1| GMP synthase [Ruegeria sp. TM1040]
 gi|123077651|sp|Q1GGV8|GUAA_SILST RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|99037496|gb|ABF64108.1| GMP synthase (glutamine-hydrolyzing) [Ruegeria sp. TM1040]
          Length = 520

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 56/184 (30%), Gaps = 17/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS   +   +   D++  +  D+G   K E        +++V +    
Sbjct: 223 KKVICALSGGVDSSVAAALIHEAIGDQLTCVFVDHGLLRKNE-------AEEVVGMFRDH 275

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +            LG++             +        +              A  L 
Sbjct: 276 MNLQVIHADETELFLGELEG-------QSDPETKRKIIGKLFIDVFQKYADQIEGAEFLA 328

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   V E+    +      TI++      L  +  + +  PL  L K E   L +++
Sbjct: 329 QGTLYPDVIESV--SFSGGPSVTIKSHHNVGGLPEKMGLKLVEPLRELFKDEVRALGREL 386

Query: 188 GGQD 191
           G  D
Sbjct: 387 GLPD 390


>gi|312622345|ref|YP_004023958.1| gmp synthase, large subunit [Caldicellulosiruptor kronotskyensis
           2002]
 gi|312202812|gb|ADQ46139.1| GMP synthase, large subunit [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 511

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 52/189 (27%), Gaps = 23/189 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS             +  +  D+G   K E E               
Sbjct: 215 NQKVVCALSGGVDSSVAAVLVHKAIGKNLYCIFVDHGLLRKGEAEE-------------- 260

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                    +       ++            ++    P          F+      A +L
Sbjct: 261 ------VMSVFKDQFDMNVIKVDAKDRFLEALRGVTDPEEKRKIIGREFIRVFEEEAEKL 314

Query: 127 G-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLA 184
           G I  +V G    D       +  TI++      L  +     +  PL  L K E  ++ 
Sbjct: 315 GDIKFLVQGTIYPDVVESGVGKAATIKSHHNVGGLPEKIKFEQIIEPLRELFKDEVRRVG 374

Query: 185 QDIGGQDLV 193
            ++G  + +
Sbjct: 375 IELGIPEKI 383


>gi|257471315|ref|ZP_05635314.1| tRNA-specific 2-thiouridylase MnmA [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
          Length = 392

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 48/183 (26%), Gaps = 15/183 (8%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--------RLCVRKKIVELM 64
           +  SGG DSS C      +  +VE L     + +  E  C           + KK+   +
Sbjct: 35  VAMSGGVDSSVCAWILKKQNYQVEGLFMKNWEEDDQEGYCSSTKDLLDAENICKKLNIYL 94

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            K   S      +    L +    +           + L N  +     +        A 
Sbjct: 95  HKMNFSSEYWEYVFENFLKEYKKGNTPNP-------DILCNKEIKFNMFLNYSIQELKAD 147

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            +   +                             L       +  P+  LKK +   +A
Sbjct: 148 YIATGHYARIKKINGKYLLLKGIDTNKDQSYFLYTLNSIQLRKILFPIGHLKKNKVRNIA 207

Query: 185 QDI 187
           + I
Sbjct: 208 KKI 210


>gi|326798455|ref|YP_004316274.1| argininosuccinate synthase [Sphingobacterium sp. 21]
 gi|326549219|gb|ADZ77604.1| argininosuccinate synthase [Sphingobacterium sp. 21]
          Length = 395

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 23/60 (38%), Gaps = 1/60 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               +L FSGG D S   +  + D    V ++  + G  ++ EL+       ++     
Sbjct: 1  MKKKVVLAFSGGLDTSFCAIYLSKDMGLEVHSVIVNTGGFSEDELKQIETRAYELGVASH 60


>gi|296119260|ref|ZP_06837828.1| GMP synthase [Corynebacterium ammoniagenes DSM 20306]
 gi|295967652|gb|EFG80909.1| GMP synthase [Corynebacterium ammoniagenes DSM 20306]
          Length = 512

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 57/193 (29%), Gaps = 12/193 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
            + I     A+   SGG DS+   +       DR+  +  D+G     E E         
Sbjct: 202 REQIGPEGRAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGEREQVEK----- 256

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            + +      L   H    A L  +S     +     I    + +        +      
Sbjct: 257 -DFVASTGAKLITAHEAD-AFLAKLSGVIDPEAKRKAIGAEFIRSFERAVAQALEESPEG 314

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           +    L    +   V E+            I++      L  +    +  PL  L K E 
Sbjct: 315 STVDFLVQGTLYPDVVESGGG----DGTANIKSHHNVGGLPDDVEFELVEPLRLLFKDEV 370

Query: 181 WKLAQDIGGQDLV 193
             + +++G  + +
Sbjct: 371 RAVGRELGLPEEI 383


>gi|260913335|ref|ZP_05919816.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pasteurella dagmatis ATCC 43325]
 gi|260632566|gb|EEX50736.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pasteurella dagmatis ATCC 43325]
          Length = 383

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 35/134 (26%), Gaps = 4/134 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 +   SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 21  NSKKKVICGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 77

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     +             +  + I F  F    A  
Sbjct: 78  AVCDKLG-IKLHKINFAAEYWDNVFEHFLQEYKAGRTPNPDILCNKEIKFKAFLEYAAED 136

Query: 126 LGITNIVIGVCETD 139
           LG   I  G     
Sbjct: 137 LGADYIATGHYVRR 150


>gi|304316376|ref|YP_003851521.1| NAD+ synthetase [Thermoanaerobacterium thermosaccharolyticum DSM
           571]
 gi|302777878|gb|ADL68437.1| NAD+ synthetase [Thermoanaerobacterium thermosaccharolyticum DSM
           571]
          Length = 545

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/146 (8%), Positives = 33/146 (22%), Gaps = 2/146 (1%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDR-VETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             A++  SGG DS+   + A+       V  +S      ++   +    + + +      
Sbjct: 290 KKAVVGLSGGIDSAVTCALAVKALGRENVLGVSMPSRYSSEGSKDDARDLAQNLGIQYRV 349

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     + +          L +         N           + L         +
Sbjct: 350 IPIEDVFKSYISIFNKDGNVLGDLAEENLQARIRGNYLMFISNREGYMVLTTGNKSEIAV 409

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIR 152
           G   +   +           +     
Sbjct: 410 GYCTLYGDMSGGLAVISDVPKTMVYE 435


>gi|284033881|ref|YP_003383812.1| GMP synthase large subunit [Kribbella flavida DSM 17836]
 gi|283813174|gb|ADB35013.1| GMP synthase, large subunit [Kribbella flavida DSM 17836]
          Length = 518

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 51/185 (27%), Gaps = 18/185 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPK 66
              L   SGG DS+   +       D++  +  D+G QR     +            +  
Sbjct: 219 KQVLCALSGGVDSAVAAALVSKAIGDQLTCVYVDHGLQRAGESDQIEKDFVAVTGTRLEV 278

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +        +    L  ++  +  +     +    +       R +         A R 
Sbjct: 279 VE--------VEQQFLSALAGVTDPEQKRKIVGREFIRTFEATARKL--------DAERH 322

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +               I++      L  +   ++  PL  L K E  +L   
Sbjct: 323 IEFLVQGTLYPDVVESGGGTGAANIKSHHNVGGLPDDLQFSLIEPLRTLFKDEVRELGLA 382

Query: 187 IGGQD 191
           +G  +
Sbjct: 383 LGLPE 387


>gi|313681210|ref|YP_004058948.1| queuosine synthesis [Sulfuricurvum kujiense DSM 16994]
 gi|313154070|gb|ADR32748.1| Queuosine synthesis [Sulfuricurvum kujiense DSM 16994]
          Length = 323

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 23/62 (37%), Gaps = 1/62 (1%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC-RLCVRKKIVELMPKWK 68
           A+ LFSGG DS+      +D+   V   + + G  +  +       + ++I        
Sbjct: 2  KAIALFSGGLDSTLAAKLIIDQGIEVIACNINTGFGSTKDRLAHMKNMCEQIGAEFRSVD 61

Query: 69 DS 70
            
Sbjct: 62 IR 63


>gi|256752431|ref|ZP_05493290.1| NAD+ synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256748700|gb|EEU61745.1| NAD+ synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 333

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/193 (9%), Positives = 47/193 (24%), Gaps = 2/193 (1%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             A++  SGG DS+   + A++    + V  +S      ++        +   +      
Sbjct: 78  KKAVVGLSGGIDSAVVCAIAVEALGKENVLAVSMPSRYSSEGSKSDARILADNLGIEFRV 137

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     L +    +     L +         N           I L         +
Sbjct: 138 IPIEPVFKSYLSVFNGDNNVIGDLAEENIQARIRGNYLTFISNREGHIVLTTGNKSELAM 197

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   +   +  +        +                  +++       +     K    
Sbjct: 198 GYCTLYGDMSGSLAPIADVPKTMVYDLARFINREREIIPISIIEKAPSAELRPNQKDEDS 257

Query: 187 IGGQDLVNLILEE 199
           +    +++ IL+ 
Sbjct: 258 LPPYKILDEILKM 270


>gi|188585091|ref|YP_001916636.1| GMP synthase (glutamine-hydrolyzing) [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|226739645|sp|B2A5V5|GUAA_NATTJ RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|179349778|gb|ACB84048.1| GMP synthase (glutamine-hydrolyzing) [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 510

 Score = 49.1 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 60/180 (33%), Gaps = 20/180 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+           D +  +  ++G   K E +    + ++  ++   + 
Sbjct: 217 KAVCGLSGGIDSTVAALLVQKAIGDDLTCIFVNHGLLRKNEQDQVRELFEQEFDINLVYV 276

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D+           L  +   +  +     I +  +       R I              +
Sbjct: 277 DASDR-------FLNKLQGVTDPEQKRKIIGEEFIRVFEEEARKIG------------DV 317

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G   TD           I++      L  +  +++  PL  L K E  ++A+++G
Sbjct: 318 DFLVQGTLYTDVVESGTETASVIKSHHNVGGLPEKMDLSLIEPLNSLFKDEVRQVARELG 377


>gi|331006070|ref|ZP_08329406.1| Argininosuccinate synthase [gamma proteobacterium IMCC1989]
 gi|330420107|gb|EGG94437.1| Argininosuccinate synthase [gamma proteobacterium IMCC1989]
          Length = 406

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 53/178 (29%), Gaps = 14/178 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  + W  + +   V T + D GQ  +VE          + E+
Sbjct: 1   MSSINKVVLAYSGGLDTSVIVKWLQETYQCEVVTFTADLGQGEEVEPARAKAEALGVKEI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                ++    D++ P+     I         ++           +  R I         
Sbjct: 61  YIDDLREEFVRDYVFPMFRANAIYEGEYLLGTSIARP-------LIAKRMIEIANETGAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           A   G T         +   Y       + A     +L     +  +       K++ 
Sbjct: 114 AISHGATGKGNDQVRFELGAYALKPGVEVIAPWREWDLTSRETLMDYCA-----KHDI 166


>gi|196019212|ref|XP_002118942.1| hypothetical protein TRIADDRAFT_9863 [Trichoplax adhaerens]
 gi|190577616|gb|EDV18572.1| hypothetical protein TRIADDRAFT_9863 [Trichoplax adhaerens]
          Length = 136

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 37/131 (28%), Gaps = 4/131 (3%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWKD 69
            ++  SGG DSST  +   ++   V  ++   Y        +   C  + I +       
Sbjct: 1   VVVAMSGGVDSSTVAAMLHEQNYEVIGITLQLYDAGEMAAKKGACCAGQDIYDAKVAADK 60

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                ++L    L       + ++ A        P   V     +        A  LG  
Sbjct: 61  IGIPHYVLNYESLFSKK---VIEDFAESYIKGETPIPCVKCNQKVKFEDLYKTAKNLGAK 117

Query: 130 NIVIGVCETDY 140
            +  G      
Sbjct: 118 ALATGHYVRKA 128


>gi|150403081|ref|YP_001330375.1| hypothetical protein MmarC7_1158 [Methanococcus maripaludis C7]
 gi|150034111|gb|ABR66224.1| conserved hypothetical protein [Methanococcus maripaludis C7]
          Length = 195

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 4/73 (5%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG----QRNKVELECRLCVRKKIVELMP 65
           A +LFSGG+DSS       +    ++ ++ ++G     R+  E    +    K+  L  
Sbjct: 2  KAHVLFSGGKDSSLSAIILHNLGYEIQLVTVNFGVLDSYRHAEETAKIIGYSHKVESLDK 61

Query: 66 KWKDSLGEDHILP 78
          +  +   +  +  
Sbjct: 62 ELIEKSVDMILKD 74


>gi|170722583|ref|YP_001750271.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas putida W619]
 gi|205816891|sp|B1JBJ1|MNMA_PSEPW RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|169760586|gb|ACA73902.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudomonas putida W619]
          Length = 374

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 48/186 (25%), Gaps = 10/186 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS      +++  +VE L     + +     C    R+ + +     
Sbjct: 11  KTRVIVGMSGGVDSSVSALLLMEQGYQVEGLFMKNWEEDDGTEYC--TAREDLADAQAVC 68

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                + H        +   +     +             +  R  I        A  LG
Sbjct: 69  DRIGIKLHT--ANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFKAFLDYALSLG 125

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G                              +G +       P+  L+K E   
Sbjct: 126 ADLIATGHYVRRRDTGAVTELLKGLDPNKDQSYFLHAVGGKEIARTLFPVGELEKPEVRA 185

Query: 183 LAQDIG 188
           +A+  G
Sbjct: 186 IAEKHG 191


>gi|94500816|ref|ZP_01307345.1| argininosuccinate synthase [Oceanobacter sp. RED65]
 gi|94427138|gb|EAT12119.1| argininosuccinate synthase [Oceanobacter sp. RED65]
          Length = 405

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/173 (13%), Positives = 48/173 (27%), Gaps = 7/173 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S    W  + +   + T + D GQ  ++E        +K  E 
Sbjct: 1   MSDINKIVLAYSGGLDTSVIAKWLQEEYNAEIVTFTADLGQGEELEP------ARKKAEA 54

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           M   +  + +               +            ++    +  R I         A
Sbjct: 55  MGIKEIFIDDLREEFARDFVFPMFRANAIYEGEYYLGTSIARPLIAKRLIEIANETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
              G T         +   Y    +  + A     +L     +  +     + 
Sbjct: 115 IAHGATGKGNDQVRFELGAYALSPNIQVIAPWREWDLNSREKLMAYCEEHNIP 167


>gi|328952124|ref|YP_004369458.1| Conserved hypothetical protein CHP00268 [Desulfobacca acetoxidans
           DSM 11109]
 gi|328452448|gb|AEB08277.1| Conserved hypothetical protein CHP00268 [Desulfobacca acetoxidans
           DSM 11109]
          Length = 258

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 31/122 (25%), Gaps = 17/122 (13%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
           M  +++     L+LFSGG DS+  L    D   +    L+F+   R   E      + + 
Sbjct: 1   MRALLRTWRRVLVLFSGGIDSTLLLKIVADLFGENSAALTFEGPHRPTGETLEARKITRL 60

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +                      G       T       +        +  R        
Sbjct: 61  LG----------VRHLTEDFDPFGLPDFRENT------PERCYACKCEMYRRGWEIASKF 104

Query: 120 AT 121
             
Sbjct: 105 EA 106


>gi|259649616|dbj|BAI41778.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Lactobacillus rhamnosus GG]
          Length = 377

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 48/189 (25%), Gaps = 11/189 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +   V  +             C         ++  
Sbjct: 8   NSNTRVVVGMSGGVDSSVTALLLKQQGYDVVGVFMKNWDDTDENGVC--TATTDYEDVAK 65

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              +     + +            + +    + +    PN  V     I        A +
Sbjct: 66  VASEIGIPYYSIN---FEKEYWDRVFQYFLDEYKAGRTPNPDVMCNKEIKFKAFLDYAEQ 122

Query: 126 LGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYE 179
           L    I +G      +         R       +T     L  +       P+  L+K E
Sbjct: 123 LNADYIAMGHYAQVKTDEQGAVHMLRGADGNKDQTYFLSQLSQDQLKKSMFPIGHLQKPE 182

Query: 180 TWKLAQDIG 188
             K+A+  G
Sbjct: 183 VRKIAEAAG 191


>gi|237750144|ref|ZP_04580624.1| argininosuccinate synthase [Helicobacter bilis ATCC 43879]
 gi|229374331|gb|EEO24722.1| argininosuccinate synthase [Helicobacter bilis ATCC 43879]
          Length = 401

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 47/169 (27%), Gaps = 5/169 (2%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L +SGG D+S  L W  D +   V T + D GQ  +VE      +  K+       
Sbjct: 4   KKVVLAYSGGLDTSVILKWLGDNYNCEVVTFTADIGQGEEVEPARAKAL--KLGIKSENI 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                 +  +           + T      +   ++    +  R +         A   G
Sbjct: 62  FIEDLREEFIK--DFVFPMFRANTIYEGEYLLGTSIARPLIAKRLVEIAKAVGADAVAHG 119

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
            T         +   Y       + A     +L     +  +     + 
Sbjct: 120 ATGKGNDQVRFELGAYALNPDIKVIAPWREWDLNSREKLLAYAEFAGIS 168


>gi|196249022|ref|ZP_03147721.1| ExsB family protein [Geobacillus sp. G11MC16]
 gi|196211251|gb|EDY06011.1| ExsB family protein [Geobacillus sp. G11MC16]
          Length = 274

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 36/86 (41%), Gaps = 1/86 (1%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           ++K+  + L+ FSGG DS+  L+ A +   D+V  ++         E++    + ++I  
Sbjct: 15  LLKEMGNVLVAFSGGVDSTFLLAMAKEALGDQVLAVTAVSETFPAREVQHATKLAEQIGV 74

Query: 63  LMPKWKDSLGEDHILPLAILGDISHS 88
              K +    E+       L    H 
Sbjct: 75  KHIKIQIHELENEDFVKNDLHRCFHC 100


>gi|22538278|ref|NP_689129.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus agalactiae
           2603V/R]
 gi|25012138|ref|NP_736533.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus agalactiae
           NEM316]
 gi|76798859|ref|ZP_00781068.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus agalactiae 18RS21]
 gi|77406508|ref|ZP_00783561.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus agalactiae H36B]
 gi|77408912|ref|ZP_00785637.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus agalactiae COH1]
 gi|54039756|sp|P66979|MNMA_STRA5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|54042260|sp|P66978|MNMA_STRA3 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|22535193|gb|AAN01002.1|AE014289_2 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus agalactiae 2603V/R]
 gi|24413682|emb|CAD47762.1| Unknown [Streptococcus agalactiae NEM316]
 gi|76585782|gb|EAO62331.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus agalactiae 18RS21]
 gi|77172503|gb|EAO75647.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus agalactiae COH1]
 gi|77174880|gb|EAO77696.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus agalactiae H36B]
          Length = 373

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 49/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MTD--NSNIRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A  LG   +  G             H    A            L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYAQVTRDENGIVHMLRGADNNKDQTYFLSQLSQEQLQKTLFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  ++A++ G
Sbjct: 174 LQKPEVRRIAEEAG 187


>gi|329765762|ref|ZP_08257331.1| ExsB family protein [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329137828|gb|EGG42095.1| ExsB family protein [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 265

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 1/60 (1%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
          D  +     ++  SGG DS+     A     +    ++ DY   +K ELE    +  +I 
Sbjct: 9  DWFENKNKVMIALSGGVDSALVAYAAFQKLGNSAIAVTADYKTLSKEELETAKQICSEIG 68


>gi|311085999|gb|ADP66081.1| tRNA-specific 2-thiouridylase MnmA [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086574|gb|ADP66655.1| tRNA-specific 2-thiouridylase MnmA [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087155|gb|ADP67235.1| tRNA-specific 2-thiouridylase MnmA [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087689|gb|ADP67768.1| tRNA-specific 2-thiouridylase MnmA [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 392

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 48/183 (26%), Gaps = 15/183 (8%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--------RLCVRKKIVELM 64
           +  SGG DSS C      +  +VE L     + +  E  C           + KK+   +
Sbjct: 35  VAMSGGVDSSVCAWILKKQNYQVEGLFMKNWEEDDQEGYCSSTKDLLDAENICKKLNIYL 94

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            K   S      +    L +    +           + L N  +     +        A 
Sbjct: 95  HKMNFSSEYWEYVFENFLKEYKKGNTPNP-------DILCNKEIKFNMFLNYSIQELKAD 147

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            +   +                             L       +  P+  LKK +   +A
Sbjct: 148 YIATGHYARIKKINGKYLLLKGIDTNKDQSYFLYTLNSIQLRKILFPIGHLKKNKVRNIA 207

Query: 185 QDI 187
           + I
Sbjct: 208 KKI 210


>gi|299141829|ref|ZP_07034964.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella oris C735]
 gi|298576680|gb|EFI48551.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella oris C735]
          Length = 366

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/183 (13%), Positives = 45/183 (24%), Gaps = 7/183 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K     LL SGG DSS  L   +      +      G   K E +C     + +      
Sbjct: 8   KDKRIALLLSGGVDSSVVLYEMVSHGLHPDCFYIMIGPEEKEEWDCTSE--EDLEMATAL 65

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 +  ++      +         +             +  R I F  F   + +  
Sbjct: 66  TNRFGCQLKVID--CHKEYWSQVTRYTMDKVKAGFTPNPDVMCNRLIKFGAFDEKIGHDY 123

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKL 183
            +             G            +    L       +     P+   +K E  ++
Sbjct: 124 DLIATGHYAQTEWIDGRKWLTTSPDPVKDQTDFLAQIYGWQLRKAIFPIGHFEKNEVREI 183

Query: 184 AQD 186
           A+ 
Sbjct: 184 AER 186


>gi|169334729|ref|ZP_02861922.1| hypothetical protein ANASTE_01135 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257467|gb|EDS71433.1| hypothetical protein ANASTE_01135 [Anaerofustis stercorihominis DSM
           17244]
          Length = 354

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 44/179 (24%), Gaps = 9/179 (5%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DS+        +   V  L            EC     +   +            
Sbjct: 1   MSGGVDSTVSAYLLKKQGYDVIGLFMKNWDETDENGECS--AEEDYDDARAVCLKLNIPC 58

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
           + +      +   +  T  +    +        +  + I F  F       L    I  G
Sbjct: 59  YTVNFT--KEYWDNVFTYFLDEYKKGRTPNPDVLCNKEIKFKCFLDYAINVLNADYIATG 116

Query: 135 VCETDYSGYPDCRHDTIRAIETAIN-----LGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                       R    +            L  +    V  PL  ++K E  ++A+  G
Sbjct: 117 HYAKVEHTKEGTRLLKAKDQHKDQTYFLSLLKEKQLERVIFPLADVEKGEVREIAEREG 175


>gi|147920252|ref|YP_685981.1| argininosuccinate synthase [uncultured methanogenic archaeon
          RC-I]
 gi|110621377|emb|CAJ36655.1| argininosuccinate synthase [uncultured methanogenic archaeon
          RC-I]
          Length = 395

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 5/85 (5%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
               +L +SGG D+S C+    + +  D+V T++ D GQ    E+E      K I +  
Sbjct: 1  MVKKVVLAYSGGLDTSVCIPLLKENYGFDKVITVTVDVGQ-PPGEIETATKKAKLISDKH 59

Query: 65 PKW--KDSLGEDHILPLAILGDISH 87
               KD    D+I P+     +  
Sbjct: 60 YTIDAKDEFVRDYIFPMIKANAMYE 84


>gi|327310318|ref|YP_004337215.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Thermoproteus uzoniensis 768-20]
 gi|326946797|gb|AEA11903.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Thermoproteus uzoniensis 768-20]
          Length = 519

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 49/188 (26%), Gaps = 20/188 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                L+  SGG DS+      A    +R   +  ++G   + E E  L   K++     
Sbjct: 223 PHEKVLVAVSGGVDSTVTAVLTARAVGERAVPIFVNHGLFREGEPEEVLSALKRLG---- 278

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                           +  +  S         ++D       +           A     
Sbjct: 279 --------------LDVVYVDASEKFLARLEGVEDCEERRRIIGETFAEVFAEVAAKIEG 324

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G       +             D I++      L     + V  PL    K E   + +
Sbjct: 325 AG-WLAQGTLYPDVIESGAVKGADRIKSHHNVAGLPQWLGLKVLEPLRDFYKDEVRAIGR 383

Query: 186 DIGGQDLV 193
            +G  + +
Sbjct: 384 ALGLPEEL 391


>gi|319940179|ref|ZP_08014532.1| tRNA-specific 2-thiouridylase mnmA [Streptococcus anginosus
           1_2_62CV]
 gi|319810650|gb|EFW06980.1| tRNA-specific 2-thiouridylase mnmA [Streptococcus anginosus
           1_2_62CV]
          Length = 373

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 49/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSD--HSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNI----VIGVCETDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +           +       R       +T     L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYARAKRDEDGIVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E   +A+  G
Sbjct: 174 LEKSEVRAIAEKAG 187


>gi|254458633|ref|ZP_05072057.1| GMP synthase [Campylobacterales bacterium GD 1]
 gi|207084399|gb|EDZ61687.1| GMP synthase [Campylobacterales bacterium GD 1]
          Length = 516

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 52/186 (27%), Gaps = 18/186 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS   +   +   D++  +  D G   K E E    V  KI    P   
Sbjct: 221 KVLCGLSGGVDSSVVAALLYEAIGDQLIPVFVDNGLLRKGEREQVEEVF-KINLKTPLIT 279

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               ++ +  LA + D              +                    A     +  
Sbjct: 280 VDAADNFLGKLAGISDPETKRKIIGHTFIEEFE----------------KEAKKHDGIKF 323

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   S   +   + I++      L       +  PL  L K E  K+  ++G
Sbjct: 324 LAQGTLYPDVIESISVNGPSEVIKSHHNVGGLPDWMDFELIEPLRELFKDEVRKIGLELG 383

Query: 189 GQDLVN 194
               + 
Sbjct: 384 LPAGMI 389


>gi|13638101|sp|O52831|GUAA_CORAM RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|6705971|dbj|BAA89456.1| GMP synthetase [Corynebacterium ammoniagenes]
          Length = 524

 Score = 49.1 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 56/185 (30%), Gaps = 12/185 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+   +       DR+  +  D+G     E E          + +    
Sbjct: 222 RAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGEREQVEK------DFVASTG 275

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             L   H    A L  ++  +  +     I    + +        +      +    L  
Sbjct: 276 AKLITAHEAD-AFLSKLAGVTDPEAKRKAIGAEFIRSFERAVAQALEESPEDSTVDFLVQ 334

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+            I++      L  +    +  PL  L K E   + +++G
Sbjct: 335 GTLYPDVVESGGG----DGTANIKSHHNVGGLPDDVEFELVEPLRLLFKDEVRAVGRELG 390

Query: 189 GQDLV 193
             + +
Sbjct: 391 LPEEI 395


>gi|320165389|gb|EFW42288.1| GMP synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 687

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 2/45 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELE 51
              L+L SGG DSS C +        DRV  L  D G   + E +
Sbjct: 225 KKVLVLVSGGVDSSVCAALLTKAINPDRVVALHIDNGFMRQDESK 269


>gi|320528889|ref|ZP_08029981.1| argininosuccinate synthase [Selenomonas artemidis F0399]
 gi|320138519|gb|EFW30409.1| argininosuccinate synthase [Selenomonas artemidis F0399]
          Length = 404

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 50/201 (24%), Gaps = 16/201 (7%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           + K+    +L +SGG D+S  + W  +      V  +  D GQ  ++             
Sbjct: 1   MAKQIKKVVLAYSGGLDTSVIIPWLKEHYNGCEVIAVCADIGQGEELAP----------- 49

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                      + HI+ L       +   T       +              +       
Sbjct: 50  VHDKALASGASKVHIVDLTREFLEEYVWPTLKAGAVYE--GKYLLGTSFARPVIAKALVE 107

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-HVTVHTPLMWLKKYET 180
           +A + G   I  G                  A    I        +   T  +   K   
Sbjct: 108 IAKKEGADAIAHGATGKGNDQVRFELTVKALAPNLEIIAPWREWDLDSRTAEIEYAKKHG 167

Query: 181 WKLAQDIGGQDLVNLILEESH 201
             +A +     +   I   SH
Sbjct: 168 IPVATENKTYSMDRNIWHLSH 188


>gi|307293760|ref|ZP_07573604.1| argininosuccinate synthase [Sphingobium chlorophenolicum L-1]
 gi|306879911|gb|EFN11128.1| argininosuccinate synthase [Sphingobium chlorophenolicum L-1]
          Length = 405

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 59/208 (28%), Gaps = 15/208 (7%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +  K    +L FSGG D+S  L W    +   V T + D GQ  ++E          + E
Sbjct: 1   MSDKINRIVLAFSGGLDTSVILKWLQQTYQCEVVTFTADLGQGEELEPARAKARLMGVKE 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
               + D L E+ +            S      + +   ++    +  R I         
Sbjct: 61  -EHIFIDDLREEFVKDYVF---PMMRSNALYEGLYLLGTSIARPLIAKRQIEIAKQVGAD 116

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV----TVHTPLMWLKK- 177
           A   G T         +   Y       + A     +L   + +      H   +   K 
Sbjct: 117 AVSHGATGKGNDQVRFELGYYGLAPDIKVIAPWREWDLASRTKLIEFAEKHQIPIPRDKR 176

Query: 178 -----YETWKLAQDIGGQDLVNLILEES 200
                     +        ++    EE+
Sbjct: 177 GESPFSTDANMLHTSSEGKVLEDPWEET 204


>gi|291514449|emb|CBK63659.1| GMP synthase (glutamine-hydrolyzing) [Alistipes shahii WAL 8301]
          Length = 508

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 57/187 (30%), Gaps = 19/187 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G   K E    L   K +   +   
Sbjct: 213 DKVVLALSGGVDSSVAAVLLHKAIGKNLYCVFVDSGLLRKNEFGEVLESYKHMGLNVKGV 272

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             S        L  L  ++     + +  +          +  +++ +L         + 
Sbjct: 273 NASAK-----FLGDLAGVTDPERKRKIIGRDFVEVFNEEAIQIKDVKWLAQGTIYPDVIE 327

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             ++             +    TI++      L  + ++ +  PL  L K E  ++ + +
Sbjct: 328 SCSV-------------NGPSATIKSHHNVGGLPEKMNLKIVEPLRLLFKDEVRRVGRSM 374

Query: 188 GGQDLVN 194
           G  + + 
Sbjct: 375 GISEQLI 381


>gi|330813344|ref|YP_004357583.1| argininosuccinate synthase [Candidatus Pelagibacter sp. IMCC9063]
 gi|327486439|gb|AEA80844.1| argininosuccinate synthase [Candidatus Pelagibacter sp. IMCC9063]
          Length = 395

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 57/176 (32%), Gaps = 13/176 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +KK    +L +SGG D+S  L W  +++   V   + D GQ   ++ +  +   K++   
Sbjct: 1   MKKINKIVLAYSGGLDTSVILRWLQEKYECEVICYTADLGQD--IDRKKIIQNAKRLGVK 58

Query: 64  MPKWKDSL---GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
               +D      +D++ P+     +         ++           +  R I       
Sbjct: 59  KIIIEDLQEIFVKDYVFPMIRANALYEGFYLLGTSIARP-------LIAKRQIEIAKKYN 111

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
             A   G T         +   Y    +  + A     NL   + +  +     + 
Sbjct: 112 AQAVSHGSTGKGNDQVRFELGYYYFGPNIKVIAPWRDWNLASRTDLIRYAKKNNIP 167


>gi|327467648|gb|EGF13145.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus sanguinis SK330]
          Length = 373

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 48/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D  K     ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWERVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A  LG   +  G             H                 L  E       PL  
Sbjct: 114 DYALTLGADYVATGHYAQVKRDQDGLVHMLRGKDNNKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E   +A+  G
Sbjct: 174 LEKPEVRAIAERAG 187


>gi|302538993|ref|ZP_07291335.1| asparagine synthase [Streptomyces sp. C]
 gi|302447888|gb|EFL19704.1| asparagine synthase [Streptomyces sp. C]
          Length = 360

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 18/56 (32%), Gaps = 5/56 (8%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDY-GQRNKVELECRLCVRKKIVELMPKW 67
           LL SGG DS+               ++  Y GQ    E      + + I   +   
Sbjct: 255 LLLSGGLDSAVLAYLMRP----PVCVTVRYPGQDRLDESTTAAVIARDIGAELVVV 306


>gi|291166309|gb|EFE28355.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Filifactor alocis ATCC 35896]
          Length = 371

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 56/187 (29%), Gaps = 12/187 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMP 65
            A   +L  SGG DSS        +   V  L   ++ ++++  +       +   ++M 
Sbjct: 1   MAKKVILGMSGGVDSSVSALLLKQQGYEVVGLFMKNWDEKDEGGVCTAT---QDYEDVMR 57

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    + +            +      + +    PN  V     I        A +
Sbjct: 58  VAGQLEIPFYTVN---FEKEYWDRVFSYFLNEYEHGRTPNPDVMCNQEIKFNAFLDYALK 114

Query: 126 LGITNIVIGVCET--DYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYET 180
           L    I +G        +G    R       + +  L   +   +     P+  L+K E 
Sbjct: 115 LEADYIAMGHYAGVLKKNGRYYLRRGKDANKDQSYFLSRITEEALSKTIFPIADLEKSEV 174

Query: 181 WKLAQDI 187
            +LA+  
Sbjct: 175 RELAEKY 181


>gi|282163083|ref|YP_003355468.1| GMP synthase [glutamine-hydrolyzing] subunit B [Methanocella
           paludicola SANAE]
 gi|282155397|dbj|BAI60485.1| GMP synthase [glutamine-hydrolyzing] subunit B [Methanocella
           paludicola SANAE]
          Length = 304

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 50/188 (26%), Gaps = 27/188 (14%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K   AL+  SGG DSS C   A     +R+  +  D G                      
Sbjct: 19  KDGRALIALSGGVDSSVCAILAHRALGERLVPVYVDTG---------------------- 56

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                   D I  +    +      +      ++    P          F+     +A  
Sbjct: 57  -LMRKGETDRIRDIFSFMNPRIVDASGQFFNALKGATDPEKKRKAVGETFIRVFEQVARD 115

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +    ++     T Y    +                +     V  P+  L K E  ++A+
Sbjct: 116 INADYLI---QGTIYPDRIESEGGIKSHHNVGGMPSVMEFKGVVEPIGDLYKDEVREVAR 172

Query: 186 DIGGQDLV 193
            +G    +
Sbjct: 173 ALGLPLEI 180


>gi|300361472|ref|ZP_07057649.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus gasseri JV-V03]
 gi|300354091|gb|EFJ69962.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus gasseri JV-V03]
          Length = 383

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 50/193 (25%), Gaps = 12/193 (6%)

Query: 3   DIIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
            ++  +    ++  SGG DSS        +   V  +             C     +   
Sbjct: 8   KMVDNSKIRVVVGMSGGVDSSVSALLLKQQGFDVVGVFMKNWDDTDDSGVC--TATEDYE 65

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           ++     +     + +            + +    + +    PN  V     I       
Sbjct: 66  DVKKVADEIGIPYYSIN---FEKDYWERVFEYFLNEYKKGRTPNPDVMCNKEIKFKSFLD 122

Query: 122 LAYRLGITNIVIGVCE----TDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWL 175
            A  L    I +G        +       R       +T     L  +    V  PL  L
Sbjct: 123 FAMDLDADYIAMGHYAATKVDENGIVHMMRPKDGNKDQTYFLSQLSQDQLKKVIFPLANL 182

Query: 176 KKYETWKLAQDIG 188
            K +  ++A   G
Sbjct: 183 TKPQVREIAIAAG 195


>gi|114776946|ref|ZP_01451989.1| argininosuccinate synthase [Mariprofundus ferrooxydans PV-1]
 gi|114553032|gb|EAU55463.1| argininosuccinate synthase [Mariprofundus ferrooxydans PV-1]
          Length = 407

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 52/169 (30%), Gaps = 7/169 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             A+L +SGG D+S  LSW  + +   V T + D GQ ++VE         K   +   +
Sbjct: 7   KKAVLAYSGGLDTSIILSWLQNTYDCEVVTFTADLGQGDEVEDARAKA---KAGGVSSIY 63

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            + L E+ +            +        +   ++    +  R I         A   G
Sbjct: 64  IEDLREEFVRDYVF---PMFRANAIYEGEYLLGTSIARPLIAKRMIEIANAEGANAVSHG 120

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
            T         +   Y       + A     +L     +  +     + 
Sbjct: 121 ATGKGNDQVRFELGFYALKPDVKVIAPWREWDLVSREDMLNYAKAHNIP 169


>gi|104781327|ref|YP_607825.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas entomophila L48]
 gi|122403646|sp|Q1IBE4|MNMA_PSEE4 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|95110314|emb|CAK15021.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudomonas entomophila L48]
          Length = 374

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 48/186 (25%), Gaps = 10/186 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS      +++  +VE L     + +     C    R+ + +     
Sbjct: 11  KTRVIVGMSGGVDSSVSALLLMEQGYQVEGLFMKNWEEDDGTEYC--TAREDLADAQAVC 68

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                + H        +   +     +             +  R  I        A  LG
Sbjct: 69  DRIGIKLHT--ANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFKAFLDYALSLG 125

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G                              +G +       P+  L+K E   
Sbjct: 126 ADLIATGHYVRRRDTGELTELLKGLDPNKDQSYFLHAVGGKEIARTLFPVGELEKPEVRA 185

Query: 183 LAQDIG 188
           +A+  G
Sbjct: 186 IAEKHG 191


>gi|76788488|ref|YP_330692.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus agalactiae A909]
 gi|123601021|sp|Q3JYG1|MNMA_STRA1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|76563545|gb|ABA46129.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus agalactiae A909]
          Length = 373

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 49/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MTD--NSNIRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A  LG   +  G             H    A            L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYAQVTRDENGIVHMLRGADNNKDQTYFLSQLSQEQLQKTLFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  ++A++ G
Sbjct: 174 LQKPEVRRIAEEAG 187


>gi|331701129|ref|YP_004398088.1| argininosuccinate synthase [Lactobacillus buchneri NRRL B-30929]
 gi|329128472|gb|AEB73025.1| Argininosuccinate synthase [Lactobacillus buchneri NRRL B-30929]
          Length = 431

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          + +    +L +SGG D+S  ++W  D+   V     + G
Sbjct: 1  MSENNKVILAYSGGLDTSVAIAWLKDKGYDVVACCINVG 39


>gi|311031538|ref|ZP_07709628.1| tRNA-specific 2-thiouridylase MnmA [Bacillus sp. m3-13]
          Length = 371

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 53/192 (27%), Gaps = 12/192 (6%)

Query: 4   IIKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           + K       ++  SGG DSS       ++   V  +             C     +   
Sbjct: 1   MTKAPKDTRVVIGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDEFGVC--TATEDYN 58

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +++          + +            + +    + +    PN  V     I       
Sbjct: 59  DVIRVCNQIGIPYYAVN---FEKQYWDKVFQYFLDEYKAGRTPNPDVMCNKEIKFKAFLE 115

Query: 122 LAYRLGITNIVIGVCET---DYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLK 176
            A  LG   +  G           Y   R       +T     LG E    V  P+  ++
Sbjct: 116 HALDLGADYLATGHYAQVEFRDGEYKMLRGLDENKDQTYFLNQLGQEQLSKVMFPIGNIE 175

Query: 177 KYETWKLAQDIG 188
           K E  ++A+  G
Sbjct: 176 KSEVREIAKRAG 187


>gi|281423882|ref|ZP_06254795.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella oris F0302]
 gi|281401970|gb|EFB32801.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella oris F0302]
          Length = 366

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/183 (13%), Positives = 45/183 (24%), Gaps = 7/183 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K     LL SGG DSS  L   +      +      G   K E +C     + +      
Sbjct: 8   KDKRIALLLSGGVDSSVVLYEMVSHGLHPDCFYIMIGPEEKEEWDCTSE--EDLEMATAL 65

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 +  ++      +         +             +  R I F  F   + +  
Sbjct: 66  TNRFGCQLKVID--CHKEYWSQVTRYTMDKVKAGFTPNPDVMCNRLIKFGAFDEKIGHDY 123

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKL 183
            +             G            +    L       +     P+   +K E  ++
Sbjct: 124 DLIATGHYAQTEWIDGRKWLTTSPDPVKDQTDFLAQIYGWQLRKTIFPIGHFEKNEVREI 183

Query: 184 AQD 186
           A+ 
Sbjct: 184 AER 186


>gi|206889695|ref|YP_002248055.1| GMP synthase (glutamine-hydrolyzing) [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206741633|gb|ACI20690.1| GMP synthase (glutamine-hydrolyzing) [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 510

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 49/185 (26%), Gaps = 18/185 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+           D +  +  D G     E   R  V + +        
Sbjct: 215 KVVCALSGGVDSTVTAVLVHKAIGDALTCIFVDNGLLRAGE---REKVEEMLRNNFHI-- 269

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                        L  +  S         + D       + G  I      A     +  
Sbjct: 270 ------------NLKVVDASERFLKRLKGVHDPERKRKIIGGEFIKIFEEEAKKIEGVKF 317

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   S        TI++      L     + +  PL  L K E  +L +++G
Sbjct: 318 LAQGTLYPDVIESISFKGPSATIKSHHNVGGLLKRMKLKLIEPLRELFKDEVRELGKELG 377

Query: 189 GQDLV 193
             + +
Sbjct: 378 IPEEI 382


>gi|154149122|ref|YP_001406622.1| argininosuccinate synthase [Campylobacter hominis ATCC BAA-381]
 gi|166219957|sp|A7I281|ASSY_CAMHC RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|153805131|gb|ABS52138.1| argininosuccinate synthase [Campylobacter hominis ATCC BAA-381]
          Length = 406

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 4/80 (5%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVR---KK 59
          + K     +L +SGG D+S  L W  D +   V T + D GQ   ++      ++   KK
Sbjct: 1  MKKNVKKVVLAYSGGLDTSVILKWLEDNYKCEVVTFTADIGQNEDLKPIKEKALKLGIKK 60

Query: 60 IVELMPKWKDSLGEDHILPL 79
              +   ++    D++ P+
Sbjct: 61 ENIFIKDLREEFVRDYVFPM 80


>gi|322386456|ref|ZP_08060085.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus cristatus ATCC 51100]
 gi|321269542|gb|EFX52473.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus cristatus ATCC 51100]
          Length = 373

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 47/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A  LG   +  G             H                 L  E       PL  
Sbjct: 114 DYALTLGADYVATGHYAQVKRDQDGLVHMLRGKDNNKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E   +A+  G
Sbjct: 174 LEKPEVRAVAERAG 187


>gi|313895595|ref|ZP_07829151.1| argininosuccinate synthase [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|312975721|gb|EFR41180.1| argininosuccinate synthase [Selenomonas sp. oral taxon 137 str.
           F0430]
          Length = 404

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 50/201 (24%), Gaps = 16/201 (7%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           + K+    +L +SGG D+S  + W  +      V  +  D GQ  ++             
Sbjct: 1   MAKQIKKVVLAYSGGLDTSVIIPWLKEHYNGCEVIAVCADIGQGEELAP----------- 49

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                      + HI+ L       +   T       +              +       
Sbjct: 50  VHDKALASGASKVHIVDLTREFLEEYVWPTLKAGAVYE--GKYLLGTSFARPVIAKALVE 107

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-HVTVHTPLMWLKKYET 180
           +A + G   I  G                  A    I        +   T  +   K   
Sbjct: 108 IAKKEGADAIAHGATGKGNDQVRFELTVKALAPNLEIIAPWREWDLDSRTAEIEYAKKHG 167

Query: 181 WKLAQDIGGQDLVNLILEESH 201
             +A +     +   I   SH
Sbjct: 168 IPVATENKTYSMDRNIWHLSH 188


>gi|251772322|gb|EES52890.1| Argininosuccinate synthase [Leptospirillum ferrodiazotrophum]
          Length = 411

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 53/203 (26%), Gaps = 17/203 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L +SGG D+S  + W        V     D GQ             + +  +  
Sbjct: 12  NPKRVVLAYSGGLDTSVAIVWLKKTYGCEVICYCADLGQG------------EDLDAVAK 59

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           K + S   D ++       +         +  + ++         R +I        A  
Sbjct: 60  KARASGASDVVVVDLRESFVREFIFPMIASGAVYEDGYLLGTSIARPLIARAQMEI-ARE 118

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-HVTVHTPLMWLKKYETWKLA 184
            G   +  G                    +  I       + T  + L+   K     + 
Sbjct: 119 RGADAVAHGATGKGNDQVRFELAYYYFDPKIRIIAPWRLWNFTSRSELINYSKENGIPVT 178

Query: 185 QDIGGQDLVNLILEESHTCYLGK 207
             +     V+  L   HT Y G 
Sbjct: 179 ATLEKPYSVDRNLF--HTSYEGG 199


>gi|254479264|ref|ZP_05092607.1| NAD synthase family protein [Carboxydibrachium pacificum DSM 12653]
 gi|214034802|gb|EEB75533.1| NAD synthase family protein [Carboxydibrachium pacificum DSM 12653]
          Length = 543

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/165 (10%), Positives = 40/165 (24%), Gaps = 2/165 (1%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             A+L  SGG DS+     A +    + V  +S      ++  ++    + K +      
Sbjct: 288 KKAVLGLSGGIDSAVVAVIASEALGKENVLAISMPSRYSSEGSVKDAEILAKNLGIDFRV 347

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     L +      +   + +         N    F      + L         +
Sbjct: 348 IPIEPVFKSYLSVFNKDGNALGDVAEENVQARIRGNYLMFFANREGYVVLTTGNKSELAM 407

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
           G   +   +  +        +                  V++   
Sbjct: 408 GYCTLYGDMSGSLAVIGDLYKTQVYELARYINREKEIIPVSIIKK 452


>gi|219849660|ref|YP_002464093.1| tRNA-specific 2-thiouridylase MnmA [Chloroflexus aggregans DSM
           9485]
 gi|254811448|sp|B8G5F1|MNMA_CHLAD RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|219543919|gb|ACL25657.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chloroflexus aggregans DSM 9485]
          Length = 359

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 64/227 (28%), Gaps = 24/227 (10%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L+  SGG DSS   +   +   +V  ++      ++  L   LC   +      +    
Sbjct: 4   VLVAMSGGVDSSLAAALLQEAGHQVTGVTMHLWDDDEQGLRESLCCAAEAATSARRVCAL 63

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG    +            + +           PN  V    +I        A  LG   
Sbjct: 64  LGIPFYVF--NYQREFRRHVIEYFIRAYTHGLTPNPCVECNRMIKFRALLDRARALGFDA 121

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-------TVHTPLMWLKKYETWKL 183
           +  G            R+   RA++T  +     H+        +  P+    K +  ++
Sbjct: 122 VATGHYARIVR-DDCGRYQLWRAVDTEKDQSYMLHMLGQADLARLLFPIGEYTKQQVREM 180

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
           A             ++   C++   D R              LR + 
Sbjct: 181 AAARCLPSANREESQDI--CFVPDGDYRN------------LLRIEA 213


>gi|92118055|ref|YP_577784.1| GMP synthase [Nitrobacter hamburgensis X14]
 gi|122990144|sp|Q1QKC3|GUAA_NITHX RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|91800949|gb|ABE63324.1| GMP synthase (glutamine-hydrolyzing) [Nitrobacter hamburgensis X14]
          Length = 540

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 59/186 (31%), Gaps = 12/186 (6%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS       +   +++  +  D+G   K E +        +VEL   
Sbjct: 237 KGRVICGLSGGVDSSVAAILIHEAIGEQLTCVFVDHGMLRKDEGKT-------VVELFRH 289

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +            LG+++  +  +     I    +       + I  L   +      
Sbjct: 290 HYNIPLVHVDASKQFLGELAGVTDPEMKRKTIGRLFIDVFEAEAKKIAALGKGSAEFLAQ 349

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G           +   +      TI++      L    ++ +  PL  L K E   L ++
Sbjct: 350 GTLY----PDVIESVSFTGGPSVTIKSHHNVGGLPDRMNMKLVEPLRELFKDEVRALGRE 405

Query: 187 IGGQDL 192
           +G  ++
Sbjct: 406 LGLPEI 411


>gi|20806605|ref|NP_621776.1| ATPase [Thermoanaerobacter tengcongensis MB4]
 gi|20515049|gb|AAM23380.1| predicted ATPase of the PP-loop superfamily implicated in cell
           cycle control [Thermoanaerobacter tengcongensis MB4]
          Length = 301

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 47/184 (25%), Gaps = 12/184 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
             ++      ++  SGG+DS             V     D G            V +   
Sbjct: 41  YKMLPPKGRVVVAISGGKDSLVTAYVLKRLGYEVLGFFVDLGITQNDFSPRSREVVENFC 100

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                      ++H +PL I+              K QD       V  R+++     + 
Sbjct: 101 -----------KEHDIPLEIVDLKERYGKDIPEVAKRQDRICAICGVTKRHLMNEYALSV 149

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            A  L   + +  + +   +           A                 PL +  + E  
Sbjct: 150 NADALATGHTLDDMAKLLLANL-MRWDLHHLAKGVPTLPAEPGFAKKIKPLAFQSEDEII 208

Query: 182 KLAQ 185
             A+
Sbjct: 209 AFAK 212


>gi|20807133|ref|NP_622304.1| NAD synthase [Thermoanaerobacter tengcongensis MB4]
 gi|20515628|gb|AAM23908.1| NAD synthase [Thermoanaerobacter tengcongensis MB4]
          Length = 543

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/165 (10%), Positives = 40/165 (24%), Gaps = 2/165 (1%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             A+L  SGG DS+     A +    + V  +S      ++  ++    + K +      
Sbjct: 288 KKAVLGLSGGIDSAVVAVIASEALGKENVLAISMPSRYSSEGSVKDAEILAKNLGIDFRV 347

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     L +      +   + +         N    F      + L         +
Sbjct: 348 IPIEPVFKSYLSVFNKDGNALGDVAEENVQARIRGNYLMFFANREGYVVLTTGNKSELAM 407

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
           G   +   +  +        +                  V++   
Sbjct: 408 GYCTLYGDMSGSLAVIGDLYKTQVYELARYINREKEIIPVSIIKK 452


>gi|328953724|ref|YP_004371058.1| tRNA-specific 2-thiouridylase mnmA [Desulfobacca acetoxidans DSM
          11109]
 gi|328454048|gb|AEB09877.1| tRNA-specific 2-thiouridylase mnmA [Desulfobacca acetoxidans DSM
          11109]
          Length = 351

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 15/36 (41%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
          +        +  SGG DS+   +  L++   V+ + 
Sbjct: 1  MRANRNRVAVALSGGLDSTVAAALLLNQGFEVQGVH 36


>gi|261377622|ref|ZP_05982195.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria cinerea ATCC 14685]
 gi|269146376|gb|EEZ72794.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria cinerea ATCC 14685]
          Length = 367

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 43/180 (23%), Gaps = 10/180 (5%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++  SGG DSS   +    +  +V  +     + +  +  C +       +       + 
Sbjct: 11  IVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWEDDDNDEYCSIKQ-----DSFDAIAVAD 65

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
                + +          +      +      PN  V     I        A   G   I
Sbjct: 66  IVGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLCNAEIKFKCFLDYAIDQGADII 125

Query: 132 VIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
             G                              L          PL  L+K E  +LA +
Sbjct: 126 ATGHYARKEVRNGTHYLLKGLDQNKDQSYFLYRLKPFQLERAIFPLGGLEKPEVRRLAAE 185


>gi|254455732|ref|ZP_05069161.1| argininosuccinate synthase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082734|gb|EDZ60160.1| argininosuccinate synthase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 393

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 53/193 (27%), Gaps = 18/193 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +K     +L +SGG D+S  L W  + +D  V   + D GQ            RKKI++ 
Sbjct: 1   MKSKKKIVLAYSGGLDTSIILKWLQENYDAEVICYTADVGQ---------EINRKKIIKN 51

Query: 64  MPKWKDSLGEDHILPLAILGDISHSS---LTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             K+         L    + D  +           + +   ++    +    I       
Sbjct: 52  AKKFGVKNIIIKDLKDIFVKDYVYPMIRGHAIYEGVYLLGTSIARPLIAKDQIKVAKKYK 111

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
             A   G T         +   +       I A      L   + +  +       K+  
Sbjct: 112 AYAVAHGATGKGNDQVRFELGYHYFGPKIKIIAPWRIWKLKSRTDLINYAK-----KHGI 166

Query: 181 WKLAQDIGGQDLV 193
                  G     
Sbjct: 167 AIPKDKKGAPPFS 179


>gi|158317731|ref|YP_001510239.1| GMP synthase [Frankia sp. EAN1pec]
 gi|226739620|sp|A8LAX2|GUAA_FRASN RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|158113136|gb|ABW15333.1| GMP synthase, large subunit [Frankia sp. EAN1pec]
          Length = 534

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 55/181 (30%), Gaps = 12/181 (6%)

Query: 12  LLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           +   SGG DS+   +       D +  +  D+G     E E               +  S
Sbjct: 234 ICGLSGGVDSAVAAALVQRAVGDTLTCVFVDHGLLRAGEAEQVER----------DFVAS 283

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G D +   A     S  +   +   K +        V   +   L  A   A    I  
Sbjct: 284 TGVDLVHVKAADRFASALAGVTDPEQKRKIIGREFIRVFEESAREL-DARAEAEGTHIGF 342

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G    D           I++      L  +    +  PL  L K E  +L +++G  
Sbjct: 343 LVQGTLYPDVIESGSPTAAKIKSHHNVGGLPDDLQFDLVEPLRTLFKDEVRRLGEELGLP 402

Query: 191 D 191
           +
Sbjct: 403 E 403


>gi|322390500|ref|ZP_08064018.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus parasanguinis ATCC 903]
 gi|321142774|gb|EFX38234.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus parasanguinis ATCC 903]
          Length = 373

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 50/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +   V  +             C     +  
Sbjct: 1   MSD--NSKTRVVVGMSGGVDSSVTALLLKQQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYARVSRDEDGIVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  +LA++ G
Sbjct: 174 LEKPEVRRLAEEAG 187


>gi|313203848|ref|YP_004042505.1| tRNA (5-methylaminomethyL-2-thiouridylate)-methyltransferase
           [Paludibacter propionicigenes WB4]
 gi|312443164|gb|ADQ79520.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Paludibacter propionicigenes WB4]
          Length = 346

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 57/193 (29%), Gaps = 17/193 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                LL  SGG DSS      L++   V  ++F +    + E        K        
Sbjct: 1   MKQRILLGMSGGTDSSVAAILLLEQGYEVIGITFRFW--EEGENFHLQDAVK-------- 50

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               LG  H+       ++  +++ +    +      P   V   N +        A RL
Sbjct: 51  LAGQLGIQHV--TYDAREVFRANVVQYFMDEYLSGRTPFPCVKCNNELKWKLILEEADRL 108

Query: 127 GITNIVIGVC-----ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           G   + +G       E ++    + +            L       +  PL    K +  
Sbjct: 109 GCDKVAMGHYVNIIQEDNHYFVTEGKDPEKDQSFFLWGLTQAQLSRIVFPLGQFHKTDVR 168

Query: 182 KLAQDIGGQDLVN 194
            +A   G + +  
Sbjct: 169 AMAAVRGYKKVSE 181


>gi|237653339|ref|YP_002889653.1| argininosuccinate synthase [Thauera sp. MZ1T]
 gi|237624586|gb|ACR01276.1| argininosuccinate synthase [Thauera sp. MZ1T]
          Length = 409

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 49/157 (31%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  ++E        +  ++ 
Sbjct: 1   MSDVNKVVLAYSGGLDTSVILKWLQDTYQCEVVTFTADLGQGEELEPARA-KALQFGIQP 59

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + D L E+ +            + T      +   ++    +  R I         A
Sbjct: 60  ENIFIDDLREEFVRDFVF---PMFRANTIYEGEYLLGTSIARPLIAKRQIEIARATGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         +   Y       + A     +L
Sbjct: 117 VSHGATGKGNDQVRFELGYYALMPGVKVIAPWREWDL 153


>gi|229817822|ref|ZP_04448104.1| hypothetical protein BIFANG_03102 [Bifidobacterium angulatum DSM
           20098]
 gi|229785611|gb|EEP21725.1| hypothetical protein BIFANG_03102 [Bifidobacterium angulatum DSM
           20098]
          Length = 520

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 55/184 (29%), Gaps = 11/184 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+   +       D++  +  D+G   K E      V+   V+       
Sbjct: 218 VICGLSGGVDSAVAAALVHKAIGDQLTCVFVDHGLLRKGE---AEQVKHDFVKATGIKLI 274

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++          L  +   S  +     I +  +       R +I    A+    +    
Sbjct: 275 AVDA----SEDFLTALKGVSEPEKKRKIIGEKFIRTFEKAQRQVIEEAGASGKEVK---F 327

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +    +  PL  L K E   +  ++G 
Sbjct: 328 LVQGTLYPDVVESGGGDGAANIKSHHNVGGLPKDIKFQLIEPLRTLFKDEVRAIGTELGL 387

Query: 190 QDLV 193
            D +
Sbjct: 388 PDEI 391


>gi|149376379|ref|ZP_01894142.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Marinobacter algicola DG893]
 gi|149359393|gb|EDM47854.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Marinobacter algicola DG893]
          Length = 386

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 48/190 (25%), Gaps = 13/190 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +    ++  SGG DSS       D+  +VE L       +     C       + +    
Sbjct: 6   ENTRVIVGMSGGVDSSVAAWLLKDQGYQVEGLFMKNWDEDDGTEYC--TAMTDLADARAV 63

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +      H    A         + ++   + +    PN  +     +        A  L
Sbjct: 64  AETIGITLHT---ASFAAEYWDRVFEHFLSEYKAGRTPNPDILCNKEVKFRAFLDYAITL 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--------WLKKY 178
           G   I  G                +                V    +         L+K 
Sbjct: 121 GADYIATGHYTRQRPLDDGSGGAELLKGLDPNKDQSYFLHAVSGERIARTLFPVGELEKP 180

Query: 179 ETWKLAQDIG 188
           E  ++A + G
Sbjct: 181 EVRRIAAEQG 190


>gi|315221594|ref|ZP_07863514.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus anginosus F0211]
 gi|315189428|gb|EFU23123.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus anginosus F0211]
          Length = 373

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 49/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSD--HSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNI----VIGVCETDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +           +       R       +T     L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYARAKRDEDGIVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E   +A+  G
Sbjct: 174 LEKSEVRAIAEKAG 187


>gi|304387557|ref|ZP_07369746.1| tRNA(Ile)-lysidine synthase [Neisseria meningitidis ATCC 13091]
 gi|304338444|gb|EFM04565.1| tRNA(Ile)-lysidine synthase [Neisseria meningitidis ATCC 13091]
          Length = 445

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/196 (11%), Positives = 45/196 (22%), Gaps = 31/196 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELM 64
               +  SGG DS   L   +    +     + L   +G                     
Sbjct: 31  KKTAVALSGGLDSVVLLHLLVRAGKKGGFIPDALHIHHG-----LSPRADDWADFCQNYC 85

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L    +        I  ++  K  A   +           R+     F   +A 
Sbjct: 86  DMLGVGLETVKVCVEKNGLGIEAAARQKRYAAFAEKGFDVLALAHHRDDQIETFMLAVAR 145

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G+  +        +                           +  PL+   + + W  A
Sbjct: 146 GGGLRALAAMPTVRPFGEKGI----------------------IWRPLLPFSRQDIWDYA 183

Query: 185 QDIGGQDLVNLILEES 200
           Q  G  ++ +    ++
Sbjct: 184 QKHGLPNIEDESNSDT 199


>gi|258593690|emb|CBE70031.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [NC10
           bacterium 'Dutch sediment']
          Length = 357

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 50/184 (27%), Gaps = 13/184 (7%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDY---GQRNKVELECRLCVRKKIVELMPKWKDSL 71
            SGG DS+   +  +++   V  +S      G  N  E   R C  K   +         
Sbjct: 1   MSGGVDSAVAAALLIEQGYEVVGISLKLLPEGAGNGSERADRCCSVKDAEDARLVAAQLG 60

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
              +IL            + +           PN  V    +I        A  LG   +
Sbjct: 61  IPYYILN---YESQFQREVIREFTEAYLGGLTPNPCVRCNELIKFGSLLQQALGLGAKRL 117

Query: 132 VIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G            R+       +         +L  E    +  P+  + K +  + A
Sbjct: 118 ATGHYARVEREDMRGRYLLRRGVDEERDQSYFLYSLTQEQLAGICFPVGHMTKDQVRERA 177

Query: 185 QDIG 188
              G
Sbjct: 178 AAYG 181


>gi|300768828|ref|ZP_07078722.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus plantarum subsp. plantarum ATCC 14917]
 gi|300493561|gb|EFK28735.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus plantarum subsp. plantarum ATCC 14917]
          Length = 379

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 46/196 (23%), Gaps = 13/196 (6%)

Query: 1   MNDII--KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           M   +        ++  SGG DSS        +   V  +             C     +
Sbjct: 2   MVKSMTDHSNTRVVVGMSGGVDSSVVALLLKQQGYDVVGVFMKNWDDTDENGVC--TATE 59

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
              ++           + +            +      + +    PN  V     I    
Sbjct: 60  DYKDVAKVADKIGIPYYSIN---FEKEYWDRVFTYFLDEYKKGRTPNPDVICNKEIKFKA 116

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRH------DTIRAIETAINLGMESHVTVHTPL 172
               A  LG   I  G             H                 L  ++   V  PL
Sbjct: 117 FLDYAMDLGADYIATGHYARLQHDEDGTMHLLRGVDSNKDQTYFLSQLDSKTLQKVMFPL 176

Query: 173 MWLKKYETWKLAQDIG 188
             + K +  KLA + G
Sbjct: 177 GEMVKPDVRKLALNAG 192


>gi|224073526|ref|XP_002195318.1| PREDICTED: argininosuccinate synthetase 1 [Taeniopygia guttata]
          Length = 397

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 5  IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          + ++   ++L +SGG D+S  L W  ++   V     + GQ+   E   R  + 
Sbjct: 1  MAQSKGTVVLAYSGGLDTSCILVWLKEQGYDVVAYLANIGQKEDFEAARRKALA 54


>gi|222100158|ref|YP_002534726.1| Argininosuccinate synthase [Thermotoga neapolitana DSM 4359]
 gi|254807534|sp|B9K8S7|ASSY_THENN RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|221572548|gb|ACM23360.1| Argininosuccinate synthase [Thermotoga neapolitana DSM 4359]
          Length = 409

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 22/51 (43%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
               +L +SGG D+S  L W  ++   V     + GQ++  E      ++
Sbjct: 1  MKEKVVLAYSGGLDTSVILKWLCEKGFEVIAYVANVGQKDDFEAIKEKALK 51


>gi|205373220|ref|ZP_03226024.1| aluminum resistance protein [Bacillus coahuilensis m4-4]
          Length = 108

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 47/108 (43%), Positives = 75/108 (69%), Gaps = 1/108 (0%)

Query: 79  LAILGDISHSSLTK-NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCE 137
           +++L  ++ ++LT+ ++A+  ++  LP+TFVPGRN++FL FAA LA ++G  +I+ GVCE
Sbjct: 1   MSLLNQLAPNALTRSDIAITHEEGELPSTFVPGRNLLFLSFAAVLAKQIGAKHIITGVCE 60

Query: 138 TDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           TD+SGYPDCR   I+++   +NL M+    +HTPLMWL K       +
Sbjct: 61  TDFSGYPDCRDVFIKSLNVTLNLSMDEQFVIHTPLMWLDKKRDMGDGR 108


>gi|170691401|ref|ZP_02882566.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia graminis C4D1M]
 gi|170143606|gb|EDT11769.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia graminis C4D1M]
          Length = 381

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 30/131 (22%), Gaps = 5/131 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS       ++   V  L     + +     C         + +   
Sbjct: 3   KQKVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDSEYCSTRQ-----DWIDVV 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +      +            +      +      PN  V     I        A  LG
Sbjct: 58  SVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLG 117

Query: 128 ITNIVIGVCET 138
              I  G    
Sbjct: 118 AETIATGHYAR 128


>gi|77165573|ref|YP_344098.1| argininosuccinate synthase [Nitrosococcus oceani ATCC 19707]
 gi|254433702|ref|ZP_05047210.1| argininosuccinate synthase [Nitrosococcus oceani AFC27]
 gi|119361298|sp|Q3J9C8|ASSY_NITOC RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|76883887|gb|ABA58568.1| argininosuccinate synthase [Nitrosococcus oceani ATCC 19707]
 gi|207090035|gb|EDZ67306.1| argininosuccinate synthase [Nitrosococcus oceani AFC27]
          Length = 405

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 48/158 (30%), Gaps = 9/158 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  + +   V T + D GQ  +V           + E+
Sbjct: 1   MSTIKKVVLAYSGGLDTSVILKWLQETYDCEVVTFTADIGQGEEVAPARAKAETLGVKEI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                ++    D++ P+         + T      +   ++    +  R           
Sbjct: 61  YIEDLREEFCRDYVFPM-------FRANTLYEGEYLLGTSIARPLIAKRLAEIASATGAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         +   Y       + A     +L
Sbjct: 114 AVAHGATGKGNDQVRFELGVYALQPDIQVIAPWREWDL 151


>gi|324997628|ref|ZP_08118740.1| GMP synthase [Pseudonocardia sp. P1]
          Length = 531

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 53/184 (28%), Gaps = 16/184 (8%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A+   SGG DS+   +       DR+  +  D+G     E E                  
Sbjct: 234 AICALSGGVDSAVAGALVQRAIGDRLTCVFVDHGLLRAGEREQVEK---------DFVAA 284

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +    H + +A     + + +T        +            +     A  +A      
Sbjct: 285 TGATLHTVDVADRFLDALAGVTD------PEEKRKIIGREFIRVFEAATAEVVADHHVGF 338

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +              TI++      L  +    +  PL  L K E   +  ++G 
Sbjct: 339 LVQGTLYPDVVESGGGDGTATIKSHHNVGGLPDDIEFALVEPLRALFKDEVRMVGAELGL 398

Query: 190 QDLV 193
            +++
Sbjct: 399 PEVI 402


>gi|322374000|ref|ZP_08048534.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus sp. C150]
 gi|321276966|gb|EFX54037.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus sp. C150]
          Length = 373

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 48/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MTD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A  LG   +  G             H    A            L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYAQVVRDEDGIVHMLRGADNNKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  ++A+  G
Sbjct: 174 LQKPEVREIAEHAG 187


>gi|296161025|ref|ZP_06843836.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia sp. Ch1-1]
 gi|295888724|gb|EFG68531.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia sp. Ch1-1]
          Length = 381

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 30/131 (22%), Gaps = 5/131 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS       ++   V  L     + +     C         + +   
Sbjct: 3   KQKVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDSEYCSTRQ-----DWIDVV 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +      +            +      +      PN  V     I        A  LG
Sbjct: 58  SVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAISLG 117

Query: 128 ITNIVIGVCET 138
              I  G    
Sbjct: 118 AETIATGHYAR 128


>gi|256619544|ref|ZP_05476390.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis ATCC 4200]
 gi|307276004|ref|ZP_07557137.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX2134]
 gi|256599071|gb|EEU18247.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis ATCC 4200]
 gi|295113315|emb|CBL31952.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus sp. 7L76]
 gi|306507334|gb|EFM76471.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX2134]
          Length = 374

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 51/194 (26%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D  K+    ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MADNSKR--RVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAKVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRLGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A +LG   +  G      +         R       +T     L          PL  
Sbjct: 114 DYAMQLGADYVATGHYAQVETDENGVVHMLRGIDNNKDQTYFLSQLSQAQLAKTMFPLGG 173

Query: 175 LKKYETWKLAQDIG 188
           ++K E   +A+  G
Sbjct: 174 MEKSEVRAIAERAG 187


>gi|239833572|ref|ZP_04681900.1| GMP synthase, C-terminal domain-containing protein [Ochrobactrum
           intermedium LMG 3301]
 gi|239821635|gb|EEQ93204.1| GMP synthase, C-terminal domain-containing protein [Ochrobactrum
           intermedium LMG 3301]
          Length = 523

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 59/185 (31%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DSS     A +   D++  +  D+G   K E        +++VE+   
Sbjct: 225 SGKVICALSGGVDSSVAALLAHEAIGDQLTCILVDHGLMRKNE-------AQQVVEMFR- 276

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 E + LPL ++                +        +              A  L
Sbjct: 277 ------EHYNLPLILVDASDRFIGELEGETDPEKKRKTIGRLFIEVFEEEAKKLGGADFL 330

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+    +      TI++      L     + +  PL  L K E   L ++
Sbjct: 331 VQGTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMKMQLVEPLRELFKDEVRLLGKE 388

Query: 187 IGGQD 191
           +G  D
Sbjct: 389 LGLPD 393


>gi|229552096|ref|ZP_04440821.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus rhamnosus LMS2-1]
 gi|229314529|gb|EEN80502.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus rhamnosus LMS2-1]
          Length = 377

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 48/189 (25%), Gaps = 11/189 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +   V  +             C         ++  
Sbjct: 8   NSNTRVVVGMSGGVDSSVTALLLKQQGYDVVGVFMKNWDDTDENGVC--TATTDYEDVAK 65

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              +     + +            + +    + +    PN  V     I        A +
Sbjct: 66  VASEIGIPYYSIN---FEKEYWDRVFQYFLDEYKAGRTPNPDVMCNKEIKFKAFLDYAEQ 122

Query: 126 LGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYE 179
           L    I +G      +         R       +T     L  +       P+  L+K E
Sbjct: 123 LNADYIAMGHYAQVKTDEQGVVHMLRGADGNKDQTYFLSQLSQDQLKKSMFPIGHLQKPE 182

Query: 180 TWKLAQDIG 188
             K+A+  G
Sbjct: 183 VRKIAEAAG 191


>gi|258510406|ref|YP_003183840.1| GMP synthase, large subunit [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257477132|gb|ACV57451.1| GMP synthase, large subunit [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 509

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 59/182 (32%), Gaps = 22/182 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L+  SGG DSS   +        ++  +  D+G   K E +           +M   
Sbjct: 215 KRVLVAISGGVDSSVAAALVHRAIGHQLTAMFVDHGLLRKGESDS----------VMQSL 264

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +D LG D +               +    +++    P          F+      + RLG
Sbjct: 265 RDKLGIDVV----------RVDAKERFLGRLEGVTDPERKRKIIGEEFIRVFEEESERLG 314

Query: 128 IT-NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +V G   TD          TI++      L  +    +  PL  L K E  +L + 
Sbjct: 315 PFDYLVQGTLYTDIIESGTHTAATIKSHHNVGGLPEDVRFEIIEPLRDLFKDEVRRLGEA 374

Query: 187 IG 188
           +G
Sbjct: 375 LG 376


>gi|218288250|ref|ZP_03492549.1| GMP synthase, large subunit [Alicyclobacillus acidocaldarius LAA1]
 gi|218241609|gb|EED08782.1| GMP synthase, large subunit [Alicyclobacillus acidocaldarius LAA1]
          Length = 509

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 59/182 (32%), Gaps = 22/182 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L+  SGG DSS   +        ++  +  D+G   K E +           +M   
Sbjct: 215 KRVLVAISGGVDSSVAAALVHRAIGHQLTAMFVDHGLLRKGESDS----------VMQSL 264

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +D LG D +               +    +++    P          F+      + RLG
Sbjct: 265 RDKLGIDVV----------RVDAKERFLGRLEGVTDPERKRKIIGEEFIRVFEEESERLG 314

Query: 128 IT-NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +V G   TD          TI++      L  +    +  PL  L K E  +L + 
Sbjct: 315 PFDYLVQGTLYTDIIESGTHTAATIKSHHNVGGLPEDVRFEIIEPLRDLFKDEVRRLGEA 374

Query: 187 IG 188
           +G
Sbjct: 375 LG 376


>gi|238580364|ref|XP_002389263.1| hypothetical protein MPER_11632 [Moniliophthora perniciosa FA553]
 gi|215451338|gb|EEB90193.1| hypothetical protein MPER_11632 [Moniliophthora perniciosa FA553]
          Length = 63

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 2/59 (3%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          +  K+   LL +SGG D+S  L+W +++   V     D GQ  + +         K+  
Sbjct: 1  MSAKSGRVLLAYSGGLDTSCILAWLIEQGYEVYVFMADVGQ--EEDFAAAEKKALKVGA 57


>gi|219851201|ref|YP_002465633.1| hypothetical protein Mpal_0537 [Methanosphaerula palustris E1-9c]
 gi|219545460|gb|ACL15910.1| PP-loop domain-containing protein [Methanosphaerula palustris
          E1-9c]
          Length = 194

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 33/74 (44%), Gaps = 1/74 (1%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A +LFSGG+DS+   +  L R  +VE  +F + Q + +           +  +   +  
Sbjct: 2  KAAVLFSGGKDSA-LAALMLARDYQVELNTFVFDQHHSLPAVEAAADALSLPLIRRTFGT 60

Query: 70 SLGEDHILPLAILG 83
          +L +  ++ +   G
Sbjct: 61 ALRDRLVVMIRQCG 74


>gi|199598161|ref|ZP_03211583.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase, PP-loop ATPase [Lactobacillus
           rhamnosus HN001]
 gi|199590922|gb|EDY99006.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase, PP-loop ATPase [Lactobacillus
           rhamnosus HN001]
          Length = 377

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 48/189 (25%), Gaps = 11/189 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +   V  +             C         ++  
Sbjct: 8   NSNTRVVVGMSGGVDSSVTALLLKQQGYDVVGVFMKNWDDTDENGVC--TATTDYEDVAK 65

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              +     + +            + +    + +    PN  V     I        A +
Sbjct: 66  VASEIGIPYYSIN---FEKEYWDRVFQYFLDEYKAGRTPNPDVMCNKEIKFKAFLDYAEQ 122

Query: 126 LGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYE 179
           L    I +G      +         R       +T     L  +       P+  L+K E
Sbjct: 123 LNADYIAMGHYAQVKTDEQGVVHMLRGADGNKDQTYFLSQLSQDQLKKSMFPIGHLQKPE 182

Query: 180 TWKLAQDIG 188
             K+A+  G
Sbjct: 183 VRKIAEAAG 191


>gi|134294775|ref|YP_001118510.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia vietnamiensis G4]
 gi|205813829|sp|A4JBM2|MNMA_BURVG RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|134137932|gb|ABO53675.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia vietnamiensis G4]
          Length = 384

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 44/192 (22%), Gaps = 11/192 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K    ++  SGG DSS       ++   V  L     + +     C         + +
Sbjct: 1   MSKR-RVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQ-----DWI 54

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                +      +            +      +      PN  V     I        A 
Sbjct: 55  DVVSVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAM 114

Query: 125 RLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            L    I  G                    T         L          PL  + K +
Sbjct: 115 SLDAEMIATGHYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEMPKTK 174

Query: 180 TWKLAQDIGGQD 191
             ++A  IG  +
Sbjct: 175 VREIAAQIGLPN 186


>gi|325291715|ref|YP_004277579.1| GMP synthase [Agrobacterium sp. H13-3]
 gi|325059568|gb|ADY63259.1| GMP synthase [Agrobacterium sp. H13-3]
          Length = 525

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 53/183 (28%), Gaps = 12/183 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS       +   D++  +  D+G     E E      + +      + 
Sbjct: 224 RVLCALSGGVDSSVAAILIHEAIGDQLTCVYVDHGLMRLGESE------QVVGMFRDHYN 277

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             L   H+    +            V  K         F      I         +    
Sbjct: 278 IPLV--HVDAADMFLGQLSGVSDPEVKRKTIGRLFIEVFEAEAAKIAADGKGAPNFLAQG 335

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
           T     +    +SG P      I++      L    ++ +  PL  L K E   L +++G
Sbjct: 336 TLYPDVIESVSFSGGPSVT---IKSHHNVGGLPERMNMQLVEPLRELFKDEVRALGRELG 392

Query: 189 GQD 191
             +
Sbjct: 393 LPE 395


>gi|163840418|ref|YP_001624823.1| tRNA-specific 2-thiouridylase MnmA [Renibacterium salmoninarum ATCC
           33209]
 gi|189040507|sp|A9WMS3|MNMA_RENSM RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|162953894|gb|ABY23409.1| tRNA methyl transferase [Renibacterium salmoninarum ATCC 33209]
          Length = 378

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 47/198 (23%), Gaps = 32/198 (16%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLS---------FDYGQRNKVELE---CRLCVR 57
             L   SGG DS+   +  ++    V  +             G R    +E         
Sbjct: 2   KVLAAMSGGVDSAVAAARTVEAGHEVVGVHLALSRMPGTLRTGSRGCCTIEDSTDAWKAC 61

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           +K+      W                +     +  +   +      PN  +     I   
Sbjct: 62  EKLGIPYYVW-------------DFSERFKEDVVDDFIAEYAAGRTPNPCMRCNERIKFA 108

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIE---TAINLGMESHVTVHTPLMW 174
                A  LG   +  G                  +      +  LG+ +H  +   +  
Sbjct: 109 ALLEKAIALGFDAVCTGHYARVAQDEDGNYELHRASDWAKDQSYVLGVLTHEQLKHSMFP 168

Query: 175 L----KKYETWKLAQDIG 188
           L     K E    A   G
Sbjct: 169 LSDAQTKAEVRAEADRRG 186


>gi|218778268|ref|YP_002429586.1| argininosuccinate synthase [Desulfatibacillum alkenivorans AK-01]
 gi|226729176|sp|B8FH30|ASSY_DESAA RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|218759652|gb|ACL02118.1| Argininosuccinate synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 400

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 49/160 (30%), Gaps = 9/160 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRK-KIV 61
           + K     +L +SGG D+S  L W ++ +   V   S D GQ  ++E             
Sbjct: 1   MGKDIKKVVLAYSGGLDTSVILKWLVETYQCEVVAFSADIGQGEELEPVRGKAEASGACA 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
             +   ++   +D++ P       +  +        +   +L    +  R +        
Sbjct: 61  VYIDDLREEFVKDYVFP-------AFRANAIYEGQYLLGTSLARPLISKRQMEIAKLEGA 113

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
            A   G T         + S         I A     +L 
Sbjct: 114 DAVSHGATGKGNDQVRFELSYLAIDPAIKIIAPWREWDLN 153


>gi|331699094|ref|YP_004335333.1| GMP synthase [Pseudonocardia dioxanivorans CB1190]
 gi|326953783|gb|AEA27480.1| GMP synthase (glutamine-hydrolyzing) [Pseudonocardia dioxanivorans
           CB1190]
          Length = 526

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 48/184 (26%), Gaps = 16/184 (8%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A+   SGG DS+   +       DR+  +  D+G     E E                  
Sbjct: 229 AVCGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGEREQVER---------DFVAA 279

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +  + H +  A     + + +++    +                             G  
Sbjct: 280 TGAKLHTVDAADRFLGALAGVSEPEQKRKIIGREFIRVFEAATAEVAEAEHVGFLVQGTL 339

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
              +                  ++      L  +    +  PL  L K E  K+  ++G 
Sbjct: 340 YPDVVESGGGTGTATI------KSHHNVGGLPDDIEFALVEPLRTLFKDEVRKVGAELGL 393

Query: 190 QDLV 193
            + +
Sbjct: 394 PETI 397


>gi|309389860|gb|ADO77740.1| GMP synthase (glutamine-hydrolyzing) [Halanaerobium praevalens DSM
           2228]
          Length = 512

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/175 (11%), Positives = 48/175 (27%), Gaps = 5/175 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +       D++  +  D+G   K E      V++   E      
Sbjct: 218 KVICGLSGGVDSAVASAIVHKAIGDQLTCIFVDHGLLRKGE---AEQVKRTFGEEFNIPL 274

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             +       L  L  ++     + +                +++ +LV     +  +  
Sbjct: 275 IYVDAKKRF-LDRLAGVTEPEAKRKIIGDEFIQVFDEEAEKIKDVGYLVQGTIYSDVIES 333

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
                      +        +    +   +    +  V     ++ L K   W+ 
Sbjct: 334 GGTDKAATIKSHHNVGGLPEEMNLELVEPLRFLFKDEVRKIGEVLGLPKEIVWRQ 388


>gi|255086163|ref|XP_002509048.1| predicted protein [Micromonas sp. RCC299]
 gi|226524326|gb|ACO70306.1| predicted protein [Micromonas sp. RCC299]
          Length = 478

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/207 (12%), Positives = 46/207 (22%), Gaps = 25/207 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLS--------FDYGQRNKVELE---CRLCVRK 58
              +L SGG DSS  L+                     F          +       V +
Sbjct: 17  KVAVLLSGGVDSSVALTLLKAAGHDCVAFYLQIWFVEDFRNTWDACPWEDDLNVARGVCE 76

Query: 59  KIVELMPKWK-----DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
            +   +           L   H +     G   +  +  N  +K                
Sbjct: 77  HLDVPLEVVPLTNQYWDLVVKHSIEQISRGRTPNPDMLCNSRVKFGAFTDWLETNRAGEF 136

Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTI---------RAIETAINLGMES 164
             +      A       +   +   D       RH                   +L    
Sbjct: 137 HRVASGHYAAMDRVQGILADTLHGDDGMNGTSRRHPCRLIMSGDARKDQTYFLAHLSQRQ 196

Query: 165 HVTVHTPLMWLKKYETWKLAQDIGGQD 191
              +  P+  L K +  ++A+  G  +
Sbjct: 197 LAALTFPIGGLPKTQIREIARSAGLPN 223


>gi|221633062|ref|YP_002522287.1| tRNA methyl transferase [Thermomicrobium roseum DSM 5159]
 gi|221155991|gb|ACM05118.1| tRNA methyl transferase [Thermomicrobium roseum DSM 5159]
          Length = 370

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 50/205 (24%), Gaps = 14/205 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            A   L+  SGG DS+               +                 V    V     
Sbjct: 8   MAERVLVALSGGVDSAVTAYLLKQAGWEPVGIHLRLFDAAPGL----DGVCCGDVAAADA 63

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +        +  L       +      +      PN  V   + + +     LA  L
Sbjct: 64  RAVAAQIGIPFFVRDLRPEFEQEVVAPTVEEYARARTPNPCVFCNHRVRIPALLELAEAL 123

Query: 127 GITNIVIGVCETDYSGYP-----DCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           GI  +  G      +        + R            L  +    +  PL    K    
Sbjct: 124 GIRFVATGHYVRKVATPGGWRLAEARDAQRDQSYVLYRLTADQLERLLFPLGEYDKPTVR 183

Query: 182 KLAQDIG-----GQDLVNLILEESH 201
            +AQ+ G         V+L   +++
Sbjct: 184 AIAQEAGLFVARKPSSVDLCFAKTY 208


>gi|153855260|ref|ZP_01996426.1| hypothetical protein DORLON_02440 [Dorea longicatena DSM 13814]
 gi|149752259|gb|EDM62190.1| hypothetical protein DORLON_02440 [Dorea longicatena DSM 13814]
          Length = 86

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 15/38 (39%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
          +    ++  SGG DSS       ++   V  ++    Q
Sbjct: 2  EKKKVVVGMSGGVDSSVAAWLLKNQGYDVIGVTMQIWQ 39


>gi|189424960|ref|YP_001952137.1| GMP synthase [Geobacter lovleyi SZ]
 gi|189421219|gb|ACD95617.1| GMP synthase, large subunit [Geobacter lovleyi SZ]
          Length = 517

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 54/188 (28%), Gaps = 18/188 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS           D+++ +  + G   K E        +K+V L  +
Sbjct: 220 NGKVICALSGGVDSSVVAVLLHKAIGDQLQCIFVNNGLLRKGE-------AEKVVNLFTR 272

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     + L     +  SS   +    I D       +    I      A     +
Sbjct: 273 -------HFKINLDY---VEASSRFLDKLKGITDPEQKRKIIGNEFIYLFEDEAKKIGTV 322

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                     +   S         I++      L     + +  P+  L K E   L ++
Sbjct: 323 DWLAQGTLYPDVIESVSTKGPSAVIKSHHNVGGLPDRMKMKLIEPVRELFKDEVRLLGKE 382

Query: 187 IGGQDLVN 194
           +G  D V 
Sbjct: 383 LGLPDEVI 390


>gi|77412483|ref|ZP_00788784.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus agalactiae CJB111]
 gi|77161459|gb|EAO72469.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus agalactiae CJB111]
          Length = 373

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 50/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MTD--NSNIRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYAQVTRDKNGIVHMLRGVDNNKDQTYFLSQLSQEQLQKTLFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  ++A++ G
Sbjct: 174 LQKPEVRRIAEEAG 187


>gi|304312856|ref|YP_003812454.1| Argininosuccinate synthase [gamma proteobacterium HdN1]
 gi|301798589|emb|CBL46819.1| Argininosuccinate synthase [gamma proteobacterium HdN1]
          Length = 404

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 50/159 (31%), Gaps = 9/159 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  + +   V T + D GQ  ++E   +      I E+
Sbjct: 1   MSDIKKVVLAYSGGLDTSIILKWLQENYQCEVVTFTADLGQGEELEPARQKAAGLGIKEI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                ++    D + P+         + T      +   ++    +  R +         
Sbjct: 61  YIEDLREEFARDFVFPM-------FRANTLYEGEYLLGTSIARPLIAKRLVEIANETQAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
           A   G T         +   Y       + A     +L 
Sbjct: 114 AISHGATGKGNDQVRFELGAYALKPGIKVIAPWREWDLN 152


>gi|157150902|ref|YP_001449344.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus gordonii str.
           Challis substr. CH1]
 gi|189040513|sp|A8AU84|MNMA_STRGC RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|157075696|gb|ABV10379.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus gordonii str. Challis substr. CH1]
          Length = 373

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 48/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D  K     ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSDNSKT--RVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A  LG   +  G             H                 L  E       PL  
Sbjct: 114 DYALTLGADYVATGHYAQVKRDQDGLVHMLRGKDNNKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E   +A+  G
Sbjct: 174 LEKPEVRSIAERAG 187


>gi|88603768|ref|YP_503946.1| GMP synthase subunit B [Methanospirillum hungatei JF-1]
 gi|88189230|gb|ABD42227.1| GMP synthase (glutamine-hydrolyzing) [Methanospirillum hungatei
           JF-1]
          Length = 305

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 53/187 (28%), Gaps = 29/187 (15%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
                 ++  SGG DSS C   A     +R+  +  D G   K E +    +   +    
Sbjct: 19  SNGEKVVIALSGGVDSSVCAELASRAIGERLIPIYVDTGLMRKGETKRISEIFGHLG--- 75

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                            L  ++ +    +      D       V  R    +      A 
Sbjct: 76  -----------------LKVVNAADEFLDALEGESDPEKKRKIVGERF---IRVFEREAT 115

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-VHTPLMWLKKYETWKL 183
             G   ++ G    D           I++      L +      V  PL  L K E  ++
Sbjct: 116 ATGAQYLLQGTIYPDC----IESEGGIKSHHNVGGLPLTMQFQGVIEPLRDLYKDEVREV 171

Query: 184 AQDIGGQ 190
           A+ +G  
Sbjct: 172 AEALGLP 178


>gi|225351906|ref|ZP_03742929.1| hypothetical protein BIFPSEUDO_03510 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157153|gb|EEG70492.1| hypothetical protein BIFPSEUDO_03510 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 520

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 55/184 (29%), Gaps = 11/184 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+   +       D++  +  D+G   K E      V+   VE       
Sbjct: 218 VICGLSGGVDSAVAAALVHKAIGDQLTCVFVDHGLLRKGE---AEQVKHDFVEATGIKLI 274

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++          L  +   S  +     I +  +       R +I    A+    +    
Sbjct: 275 AVDA----SEDFLTALKGVSEPEKKRKIIGEKFIRTFEKAQRQVIEEAGASGKEVK---F 327

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +    +  PL  L K E   +  ++G 
Sbjct: 328 LVQGTLYPDVVESGGGDGAANIKSHHNVGGLPDDIKFQLVEPLRTLFKDEVRAIGTELGL 387

Query: 190 QDLV 193
            D +
Sbjct: 388 PDEI 391


>gi|212716079|ref|ZP_03324207.1| hypothetical protein BIFCAT_00992 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661446|gb|EEB22021.1| hypothetical protein BIFCAT_00992 [Bifidobacterium catenulatum DSM
           16992]
          Length = 520

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 55/184 (29%), Gaps = 11/184 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+   +       D++  +  D+G   K E      V+   VE       
Sbjct: 218 VICGLSGGVDSAVAAALVHKAIGDQLTCVFVDHGLLRKGE---AEQVKHDFVEATGIKLI 274

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++          L  +   S  +     I +  +       R +I    A+    +    
Sbjct: 275 AVDA----SEDFLTALKGVSEPEKKRKIIGEKFIRTFEKAQRQVIEEAGASGKEVK---F 327

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +    +  PL  L K E   +  ++G 
Sbjct: 328 LVQGTLYPDVVESGGGDGAANIKSHHNVGGLPDDIKFQLVEPLRTLFKDEVRAIGTELGL 387

Query: 190 QDLV 193
            D +
Sbjct: 388 PDEI 391


>gi|330506698|ref|YP_004383126.1| GMP synthase subunit B [Methanosaeta concilii GP-6]
 gi|328927506|gb|AEB67308.1| GMP synthase, subunit B [Methanosaeta concilii GP-6]
          Length = 302

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 1/55 (1%)

Query: 8  APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
             A++  SGG DSS C   A     DR+  +  D G   + E +    + K + 
Sbjct: 19 KGRAIIGLSGGVDSSVCAMLAHRALGDRLVPVYVDSGLMRQSESDRIEELFKDLG 73


>gi|325698055|gb|EGD39936.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus sanguinis SK160]
          Length = 373

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 54/195 (27%), Gaps = 15/195 (7%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKK 59
           M+D  K     ++  SGG DSS       ++   V  +   ++   ++  +       K 
Sbjct: 1   MSDNSKI--RVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDEFGVCTATEDYKD 58

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +  +  +   S                   + +    + +    PN  V     I     
Sbjct: 59  VAAVADQIGISYYS------VNFEKEYWERVFEYFLAEYRAGRTPNPDVMCNKEIKFKAF 112

Query: 120 ATLAYRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLM 173
              A  LG   +  G                R       +T     L  E       PL 
Sbjct: 113 LDYALTLGADYVATGHYAQVKRDQDGLVHMLRGKDNNKDQTYFLSQLSQEQLQKTMFPLG 172

Query: 174 WLKKYETWKLAQDIG 188
            L+K E   +A+  G
Sbjct: 173 HLEKPEVRAIAERAG 187


>gi|325679373|ref|ZP_08158958.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Ruminococcus albus 8]
 gi|324108970|gb|EGC03201.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Ruminococcus albus 8]
          Length = 513

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 48/185 (25%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +        ++  +  D+G   K E +      K       +  
Sbjct: 220 KVLLALSGGVDSSVLAALLSKAVGRQLTCIFVDHGFMRKNEGDEVEAAFKDWDINFVRVN 279

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L      +    ++ +      +        V       +      +     
Sbjct: 280 AKEQFMSKLRGVSDPETKRKTIGEEFIRVFEAEAKKIGHVDFLAQGTIYPDVIESGAGDA 339

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I           Y D +                    +  PL  L K ET KL Q++G
Sbjct: 340 AVIKSHHNVGGLPDYVDFK-------------------EIIEPLRMLFKDETRKLGQELG 380

Query: 189 GQDLV 193
             + +
Sbjct: 381 LSETL 385


>gi|303232130|ref|ZP_07318833.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Veillonella atypica ACS-049-V-Sch6]
 gi|302513236|gb|EFL55275.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Veillonella atypica ACS-049-V-Sch6]
          Length = 353

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 56/190 (29%), Gaps = 18/190 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV--RKKIVELM 64
                 +  SGG DSS   +  L +  +V  ++           E  L V   KK+ + +
Sbjct: 1   MEKVIAVAMSGGVDSSLTAAMLLKQGYKVFGITLWLWVSGTPYDEVPLAVTDAKKMCDFL 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                   E H++    +   +            +  N     V     I        A 
Sbjct: 61  ------GIEHHVIDARDVFYENVVDYFVKEYAYGRTPNPC---VFCNKNIKFDLMLNRAL 111

Query: 125 RLGITNIVIGVCETDYSGYPD-----CRHDTIRAIETAINLGMESHV--TVHTPLMWLKK 177
            LG T++V G                 +       ++ +   M   +   +  PL    K
Sbjct: 112 ELGATHMVTGHYAQVNYNEDTGLYELHKGVDPTKDQSYVMYNMNQRILSHLMFPLGGQCK 171

Query: 178 YETWKLAQDI 187
            ET KLA + 
Sbjct: 172 TETRKLAAEY 181


>gi|289450432|ref|YP_003475365.1| GMP synthase family protein [Clostridiales genomosp. BVAB3 str.
          UPII9-5]
 gi|289184979|gb|ADC91404.1| GMP synthase (glutamine-hydrolyzing) family protein
          [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 330

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 9  PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
             LL  SGG DSS   +  +      +  +  ++G   + E E  + V +
Sbjct: 40 NKVLLALSGGVDSSVVAALLIKAIGRNLVAVHVNHGLLRQGEPEQVIEVFR 90


>gi|270294933|ref|ZP_06201134.1| tRNA methyl transferase [Bacteroides sp. D20]
 gi|270274180|gb|EFA20041.1| tRNA methyl transferase [Bacteroides sp. D20]
          Length = 350

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 50/191 (26%), Gaps = 20/191 (10%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY--GQRNKVELECRLCVRKKIVE 62
           +K     LL  SGG DSS       +    V  ++F +         LE    +  K+  
Sbjct: 1   MKSDKRVLLGMSGGTDSSVAAMRLQEAGYEVTGVTFRFYEAGDETGYLEDARALALKLGM 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
               +                ++  S + +    +      P       N +     A +
Sbjct: 61  KHITY-------------DARELFRSRIIRYFVEEYLRGRTPVPCTVCNNELKWALLAKI 107

Query: 123 AYRLGITNIVIGVCETDY-SGYPDCRHDTIRAIETAINLGMESHVTVHTPLM----WLKK 177
           A   GI  I  G       SG            +            +   ++     + K
Sbjct: 108 ADEKGIYWISTGHYVRKVLSGGKYYIAPAADKDKDQTFFLWGLKQDILQRMLLPMGDITK 167

Query: 178 YETWKLAQDIG 188
            E    A + G
Sbjct: 168 NEARSYAAERG 178


>gi|213964802|ref|ZP_03393001.1| GMP synthase [glutamine-hydrolyzing] [Corynebacterium amycolatum
           SK46]
 gi|213952338|gb|EEB63721.1| GMP synthase [glutamine-hydrolyzing] [Corynebacterium amycolatum
           SK46]
          Length = 524

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 58/185 (31%), Gaps = 12/185 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+   +       DR+  +  D+G   + E   R  V K  V       
Sbjct: 222 RAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRQGE---REQVEKDFVAATGAKL 278

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            ++ +  +   A+ G         +   K +           R +   +  A     +  
Sbjct: 279 ITVDDSKVFLDALAG-------ITDPETKRKTIGREFIRSFERAVAQALEGAPEGETVD- 330

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +   T+  PL  L K E   + +++G
Sbjct: 331 FLVQGTLYPDVVESGGGSGTANIKSHHNVGGLPDDVEFTLVEPLRLLFKDEVRAVGRELG 390

Query: 189 GQDLV 193
             + +
Sbjct: 391 LPEEI 395


>gi|169630437|ref|YP_001704086.1| tRNA-specific 2-thiouridylase MnmA [Mycobacterium abscessus ATCC
           19977]
 gi|229486416|sp|B1MDW3|MNMA_MYCA9 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|169242404|emb|CAM63432.1| Probable tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycobacterium abscessus]
          Length = 356

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 44/181 (24%), Gaps = 4/181 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL-MPKWK 68
             L   SGG DSS   +  +D    V  +                    K       +  
Sbjct: 2   KILAAMSGGVDSSVAAARMVDAGHEVVGVHLALSAAPGTLRTGSRGCCSKEDAADARRVA 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D LG    +      D     +  +      +   PN  V     I     A  A  LG 
Sbjct: 62  DMLGIPFYVW--DFADRFKEDVIDDFVEAYAEGRTPNPCVKCNEKIKFAALADRAVALGF 119

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM-WLKKYETWKLAQDI 187
             +  G       G      D  +     + +     +      +    K +    A+  
Sbjct: 120 DAVATGHYARLQDGRLRRAVDADKDQSYVLGVLTPEQLRRAMFPVGDSPKPDIRAEAEQR 179

Query: 188 G 188
           G
Sbjct: 180 G 180


>gi|114289|sp|P13256|ASSY_METVA RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|150046|gb|AAA88322.1| argininosuccinate synthetase [Methanococcus vannielii]
          Length = 397

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 63/190 (33%), Gaps = 22/190 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +   A+L +SGG D+S CL    D++  +V +++ D GQ  + +L+      KK+  L  
Sbjct: 2   QEKIAVLAYSGGLDTSCCLKLLEDKYNYKVVSVAVDVGQ-PEDDLKEPEEKAKKLGVL-- 58

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  + + +      +                             +  +  A LA  
Sbjct: 59  -------KHYTID---AKEEFAVDYIFRAIKANALYEGYPLSTALARPLIAIKIAELAKE 108

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G   I  G        +        +A E  I   +          + L + E  + A+
Sbjct: 109 IGADAISHGCTGKGNDQFRFESVIRTKAPEIEIIAPVRD--------LNLTRTEEIQYAK 160

Query: 186 DIGGQDLVNL 195
           + G    V+L
Sbjct: 161 EKGIPIPVDL 170


>gi|327313700|ref|YP_004329137.1| GMP synthase [Prevotella denticola F0289]
 gi|326945198|gb|AEA21083.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Prevotella denticola F0289]
          Length = 537

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 52/188 (27%), Gaps = 21/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS C           +  +  D+G   K E    +   K +   +  
Sbjct: 236 NDRVILGLSGGVDSSVCAVLLNKAIGKNLTCIFVDHGMLRKNEFAKVMKAYKGLGLNVTG 295

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              S                         ++   +      + GR+ + +  A       
Sbjct: 296 VDASEKFFK-------------------DLEGVTDPEQKRKIIGRDFVEVFNAEARKIT- 335

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G    D           I++      L  E  + +  PL WL K E  ++   
Sbjct: 336 DAKWLAQGTIYPDRIESLSITGMVIKSHHNVGGLPDEMRLRLCEPLRWLFKDEVRRVGHQ 395

Query: 187 IGGQDLVN 194
           +   + + 
Sbjct: 396 LEMPERLI 403


>gi|325859994|ref|ZP_08173121.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Prevotella denticola CRIS 18C-A]
 gi|325482520|gb|EGC85526.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Prevotella denticola CRIS 18C-A]
          Length = 536

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 52/188 (27%), Gaps = 21/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS C           +  +  D+G   K E    +   K +   +  
Sbjct: 235 NDRVILGLSGGVDSSVCAVLLNKAIGKNLTCIFVDHGMLRKNEFAKVMKAYKGLGLNVTG 294

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              S                         ++   +      + GR+ + +  A       
Sbjct: 295 VDASEKFFK-------------------DLEGVTDPEQKRKIIGRDFVEVFNAEARKIT- 334

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G    D           I++      L  E  + +  PL WL K E  ++   
Sbjct: 335 DAKWLAQGTIYPDRIESLSITGMVIKSHHNVGGLPDEMRLRLCEPLRWLFKDEVRRVGHQ 394

Query: 187 IGGQDLVN 194
           +   + + 
Sbjct: 395 LEMPERLI 402


>gi|320580044|gb|EFW94267.1| Arginosuccinate synthetase [Pichia angusta DL-1]
          Length = 415

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 36/91 (39%), Gaps = 7/91 (7%)

Query: 5  IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
          + K    + L +SGG D+S  L+W L++   V     + GQ    E +      K +   
Sbjct: 1  MSKGK--VCLAYSGGLDTSVILAWLLEQGYEVIAFMANIGQ----EEDFAAAEEKALAIG 54

Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKNV 94
            K+         +   +   +  +++ +NV
Sbjct: 55 ATKYVLVDVRKEFVEQVLFPAVQVNAIYENV 85


>gi|167946028|ref|ZP_02533102.1| argininosuccinate synthase [Endoriftia persephone
           'Hot96_1+Hot96_2']
 gi|110589130|gb|ABG77074.1| argininosuccinate synthase [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 166

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 46/154 (29%), Gaps = 9/154 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM-PK 66
              +L +SGG D+S  + W  D +   V T + D GQ  +VE          I E+    
Sbjct: 7   KKVVLAYSGGLDTSIIVKWLQDEYQCEVVTFTADIGQGEEVEPARAKAEAAGIKEIYIED 66

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            ++    D + P+     I         ++           +  R +         A   
Sbjct: 67  LREEFVRDFVFPMFRANAIYEGEYLLGTSIARP-------LIAKRLVEIARETGADAISH 119

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           G T         +   Y       I A     +L
Sbjct: 120 GATGKGNDQVRFELGAYALMPDVKIIAPWREWDL 153


>gi|321309601|ref|YP_004191930.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycoplasma haemofelis str. Langford 1]
 gi|319801445|emb|CBY92091.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycoplasma haemofelis str. Langford 1]
          Length = 368

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 55/197 (27%), Gaps = 20/197 (10%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-------------DYGQRNKVELE 51
           +      ++  SGG DS+        +   +  +               D G  ++ +L+
Sbjct: 1   MDSMKKVVIALSGGVDSAISAFLLKQKNHDLHAVYMQNWDSQVNEENAEDSGCSSREDLK 60

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
               +  K+   +  +   + E          ++  ++L  N  +           +  R
Sbjct: 61  YVKEICNKLNIPLTVYN-FVPEYWEYVFEPYLNLVQNNLLSNPDILCNSKIKF-GVLLNR 118

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
            I        LA       I              C +           L  +    +  P
Sbjct: 119 IIQDFGPDIKLATGHWARVINRDGRYMLA----VCSNPNKDQTYFLSRLAPDQLKYILFP 174

Query: 172 LMWL-KKYETWKLAQDI 187
           L  +  K E  ++A+D+
Sbjct: 175 LQDIQSKEEIREIAKDL 191


>gi|296445479|ref|ZP_06887436.1| argininosuccinate synthase [Methylosinus trichosporium OB3b]
 gi|296257045|gb|EFH04115.1| argininosuccinate synthase [Methylosinus trichosporium OB3b]
          Length = 414

 Score = 48.8 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 41/134 (30%), Gaps = 12/134 (8%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           M+   K     +L +SGG D+S  L W        V T + D GQ  ++E        + 
Sbjct: 1   MSRQKKDIKRVVLAYSGGLDTSIILKWLQTTYGCEVVTFTADLGQGEELEP--ARAKAEL 58

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +          +  +HI    +  +     +        Q   L          +     
Sbjct: 59  LG---------VKPEHIFIEDLREEFVRDFVFPMFRANAQYEGLYLLGTSIARPLIAKKQ 109

Query: 120 ATLAYRLGITNIVI 133
             +A +LG   +  
Sbjct: 110 IEIARKLGADAVCH 123


>gi|329896217|ref|ZP_08271395.1| Argininosuccinate synthase [gamma proteobacterium IMCC3088]
 gi|328921888|gb|EGG29255.1| Argininosuccinate synthase [gamma proteobacterium IMCC3088]
          Length = 406

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 52/174 (29%), Gaps = 9/174 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  + W  D +   V T + D GQ  +VE          + E+
Sbjct: 1   MSDINKVVLAYSGGLDTSVIVRWLQDTYNCEVVTFTADIGQGEEVEPARAKAEALGVKEI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                ++    D + P+         + T      +   ++    +  R +         
Sbjct: 61  YIEDLREEFVRDFVFPM-------FRANTVYEGEYLLGTSIARPLIAKRLVEIANETNAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
           A   G T         +   Y       + A     +L     +  +     + 
Sbjct: 114 AISHGATGKGNDQVRFELGAYALKPGIQVIAPWREWDLNSREALMAYCEERNIP 167


>gi|312127518|ref|YP_003992392.1| gmp synthase, large subunit [Caldicellulosiruptor hydrothermalis
           108]
 gi|311777537|gb|ADQ07023.1| GMP synthase, large subunit [Caldicellulosiruptor hydrothermalis
           108]
          Length = 511

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 55/189 (29%), Gaps = 23/189 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS             +  +  D+G   K E E  + V K        
Sbjct: 215 NQKVVCALSGGVDSSVAAVLVHKAIGKNLYCIFVDHGLLRKGEAEEVMSVFKD------- 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                       + ++   +       +    +               F+      A +L
Sbjct: 268 ---------QFDMNVIKVDAKDRFLDALKGVTEPEEKRKII----GREFIRVFEEEAEKL 314

Query: 127 G-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLA 184
           G I  +V G    D       +  TI++      L  +     +  PL  L K E  ++ 
Sbjct: 315 GDIKFLVQGTIYPDVVESGVGKAATIKSHHNVGGLPEKIKFEQIIEPLRELFKDEVRRVG 374

Query: 185 QDIGGQDLV 193
            ++G  + +
Sbjct: 375 IELGIPEKI 383


>gi|311246646|ref|XP_003122283.1| PREDICTED: argininosuccinate synthase-like [Sus scrofa]
          Length = 412

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 21/48 (43%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
          +    S +L +SGG D+S  L W  ++   V     + GQ+   E   
Sbjct: 1  MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48


>gi|317056278|ref|YP_004104745.1| GMP synthase large subunit [Ruminococcus albus 7]
 gi|315448547|gb|ADU22111.1| GMP synthase, large subunit [Ruminococcus albus 7]
          Length = 513

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 55/187 (29%), Gaps = 24/187 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +        ++  +  D+G   K E +      K       +  
Sbjct: 220 KVLLALSGGVDSSVLAALLSKAVGRQLTCIFVDHGFMRKNEGDEVEAAFKDWDINFVRVN 279

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG- 127
                        +G +   S  +     I +               +      A ++G 
Sbjct: 280 AK--------EQFMGKLRGVSDPETKRKTIGEEF-------------IRVFEAEAKKIGK 318

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLAQD 186
           +  +  G    D           I++      L        +  PL  L K ET KL Q+
Sbjct: 319 VDFLAQGTIYPDVIESGAGDAAVIKSHHNVGGLPDHVDFKEIIEPLRMLFKDETRKLGQE 378

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 379 LGLSETL 385


>gi|296191017|ref|XP_002743443.1| PREDICTED: argininosuccinate synthase isoform 1 [Callithrix
          jacchus]
 gi|296191019|ref|XP_002743444.1| PREDICTED: argininosuccinate synthase isoform 2 [Callithrix
          jacchus]
          Length = 412

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 21/48 (43%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
          +    S +L +SGG D+S  L W  ++   V     + GQ+   E   
Sbjct: 1  MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48


>gi|269120170|ref|YP_003308347.1| GMP synthase, large subunit [Sebaldella termitidis ATCC 33386]
 gi|268614048|gb|ACZ08416.1| GMP synthase, large subunit [Sebaldella termitidis ATCC 33386]
          Length = 512

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 55/192 (28%), Gaps = 18/192 (9%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
             I K    +L  SGG DSS       +    ++  +  D G            + +K  
Sbjct: 210 KQIVKDDKVILGLSGGVDSSVAAVLINNAIGKQLTCIFVDTG------------LLRK-- 255

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +   K  +   E   L +  +   +        A + +                  +   
Sbjct: 256 DEAKKVLEYYKEHFDLDIKFVDAKNRFFEKLKGADEPEQKRKIIGHEFIEIFNEETYKLK 315

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            A  L    I   V E+     P      I++      L  +    +  PL  L K E  
Sbjct: 316 GAKFLAQGTIYPDVIESQSIKGPSHT---IKSHHNVGGLPEDLAFELLEPLKELFKDEVR 372

Query: 182 KLAQDIGGQDLV 193
           K+  ++G    V
Sbjct: 373 KVGAELGLPHFV 384


>gi|315230077|ref|YP_004070513.1| TilS-like tRNA(Ile)-lysidine synthetase [Thermococcus barophilus
          MP]
 gi|315183105|gb|ADT83290.1| TilS-like tRNA(Ile)-lysidine synthetase [Thermococcus barophilus
          MP]
          Length = 269

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 28/73 (38%), Gaps = 10/73 (13%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL+FSGG+DSS  L         V  ++F +    +  L   +   +K+       
Sbjct: 20 KKKILLMFSGGKDSSLALYIMKKAGLDVSAITFFHKWSWRETLLWGMRFTEKLR------ 73

Query: 68 KDSLGEDHILPLA 80
               E +++ + 
Sbjct: 74 ----VEHYLIDIT 82


>gi|170290101|ref|YP_001736917.1| ExsB family protein [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174181|gb|ACB07234.1| ExsB family protein [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 260

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 61/199 (30%), Gaps = 42/199 (21%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K     ++  SGG DSST  +       D+   ++     + + E+E    V ++I    
Sbjct: 11  KGKDGVIIALSGGLDSSTLAALCKKLLGDKAIAVTVASELQPEEEIEGARRVAEEIG--- 67

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                      ++ +++L         + VA    D          R I  L      A 
Sbjct: 68  -------IRHILIEVSLLK--------EEVARNGPDRCYHCKKAMFRRIREL------AE 106

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            LG+  I  G   +              +    I    E  +      +  +K E  ++A
Sbjct: 107 ELGVREIFDGTNAS-------------DSWRPGIGALRELGIRSPWAELGFRKEEIREIA 153

Query: 185 QDIGGQDLVNLILEESHTC 203
           +++G             +C
Sbjct: 154 RNLGLSVSEKAPQ----SC 168


>gi|158259689|dbj|BAF85803.1| unnamed protein product [Homo sapiens]
          Length = 412

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 21/48 (43%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
          +    S +L +SGG D+S  L W  ++   V     + GQ+   E   
Sbjct: 1  MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48


>gi|148700170|gb|EDL32117.1| mCG15755 [Mus musculus]
          Length = 412

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 21/48 (43%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
          +    S +L +SGG D+S  L W  ++   V     + GQ+   E   
Sbjct: 1  MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48


>gi|119608340|gb|EAW87934.1| argininosuccinate synthetase, isoform CRA_c [Homo sapiens]
          Length = 393

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 21/48 (43%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
          +    S +L +SGG D+S  L W  ++   V     + GQ+   E   
Sbjct: 1  MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48


>gi|73967742|ref|XP_849895.1| PREDICTED: similar to Argininosuccinate synthase
          (Citrulline--aspartate ligase) isoform 3 [Canis
          familiaris]
 gi|73967748|ref|XP_860201.1| PREDICTED: similar to Argininosuccinate synthase
          (Citrulline--aspartate ligase) isoform 5 [Canis
          familiaris]
          Length = 412

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 21/48 (43%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
          +    S +L +SGG D+S  L W  ++   V     + GQ+   E   
Sbjct: 1  MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48


>gi|73967746|ref|XP_860166.1| PREDICTED: similar to argininosuccinate synthetase isoform 4
          [Canis familiaris]
          Length = 390

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 21/48 (43%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
          +    S +L +SGG D+S  L W  ++   V     + GQ+   E   
Sbjct: 1  MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48


>gi|73967744|ref|XP_537813.2| PREDICTED: similar to argininosuccinate synthetase isoform 1
          [Canis familiaris]
          Length = 393

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 21/48 (43%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
          +    S +L +SGG D+S  L W  ++   V     + GQ+   E   
Sbjct: 1  MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48


>gi|74146278|dbj|BAE28914.1| unnamed protein product [Mus musculus]
          Length = 412

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 21/48 (43%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
          +    S +L +SGG D+S  L W  ++   V     + GQ+   E   
Sbjct: 1  MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48


>gi|197097364|ref|NP_001126812.1| argininosuccinate synthase [Pongo abelii]
 gi|55732726|emb|CAH93061.1| hypothetical protein [Pongo abelii]
          Length = 276

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 21/48 (43%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
          +    S +L +SGG D+S  L W  ++   V     + GQ+   E   
Sbjct: 1  MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48


>gi|28872|emb|CAA25771.1| unnamed protein product [Homo sapiens]
 gi|179057|gb|AAA51783.1| argininosuccinate synthetase [Homo sapiens]
          Length = 412

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 21/48 (43%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
          +    S +L +SGG D+S  L W  ++   V     + GQ+   E   
Sbjct: 1  MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48


>gi|6996911|ref|NP_031520.1| argininosuccinate synthase [Mus musculus]
 gi|114290|sp|P16460|ASSY_MOUSE RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|309111|gb|AAA37266.1| argininosuccinate synthetase (EC 6.3.4.5) [Mus musculus]
 gi|12805227|gb|AAH02074.1| Argininosuccinate synthetase 1 [Mus musculus]
 gi|56270570|gb|AAH87556.1| Argininosuccinate synthetase 1 [Mus musculus]
 gi|74144675|dbj|BAE27321.1| unnamed protein product [Mus musculus]
 gi|123228123|emb|CAM24505.1| argininosuccinate synthetase 1 [Mus musculus]
 gi|148676562|gb|EDL08509.1| mCG19004 [Mus musculus]
          Length = 412

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 21/48 (43%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
          +    S +L +SGG D+S  L W  ++   V     + GQ+   E   
Sbjct: 1  MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48


>gi|25453414|ref|NP_037289.1| argininosuccinate synthase [Rattus norvegicus]
 gi|114291|sp|P09034|ASSY_RAT RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|55767|emb|CAA30999.1| unnamed protein product [Rattus norvegicus]
 gi|203016|gb|AAA40771.1| argininosuccinate synthetase [Rattus norvegicus]
 gi|38648840|gb|AAH63146.1| Argininosuccinate synthetase 1 [Rattus norvegicus]
 gi|149039053|gb|EDL93273.1| argininosuccinate synthetase [Rattus norvegicus]
          Length = 412

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 21/48 (43%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
          +    S +L +SGG D+S  L W  ++   V     + GQ+   E   
Sbjct: 1  MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48


>gi|21358151|ref|NP_649674.1| CG1315 [Drosophila melanogaster]
 gi|6685243|sp|O97069|ASSY_DROME RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|4389446|gb|AAD19816.1| argininosuccinate synthase-like [Drosophila melanogaster]
 gi|23170640|gb|AAF54103.2| CG1315 [Drosophila melanogaster]
 gi|223718736|gb|ACN22205.1| MIP05494p [Drosophila melanogaster]
          Length = 419

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 3/64 (4%)

Query: 7  KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               ++L +SGG D+S  L W LD+   V  +  D GQ+   +         KI     
Sbjct: 1  MPKETVILAYSGGLDTSCVLKWLLDKQYEVICVLADVGQK--EDFTAAEKKALKIGAKKV 58

Query: 66 KWKD 69
             D
Sbjct: 59 IVAD 62


>gi|16950633|ref|NP_446464.1| argininosuccinate synthase [Homo sapiens]
 gi|53759107|ref|NP_000041.2| argininosuccinate synthase [Homo sapiens]
 gi|332255353|ref|XP_003276797.1| PREDICTED: argininosuccinate synthase isoform 1 [Nomascus
          leucogenys]
 gi|332255355|ref|XP_003276798.1| PREDICTED: argininosuccinate synthase isoform 2 [Nomascus
          leucogenys]
 gi|20141195|sp|P00966|ASSY_HUMAN RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|14328059|gb|AAH09243.1| Argininosuccinate synthetase 1 [Homo sapiens]
 gi|18203822|gb|AAH21676.1| Argininosuccinate synthetase 1 [Homo sapiens]
 gi|19482138|gb|AAK67487.1| argininosuccinate synthetase [Homo sapiens]
 gi|55958410|emb|CAI16160.1| argininosuccinate synthetase 1 [Homo sapiens]
 gi|119608338|gb|EAW87932.1| argininosuccinate synthetase, isoform CRA_a [Homo sapiens]
 gi|119608341|gb|EAW87935.1| argininosuccinate synthetase, isoform CRA_a [Homo sapiens]
 gi|189054708|dbj|BAG37558.1| unnamed protein product [Homo sapiens]
 gi|190690279|gb|ACE86914.1| argininosuccinate synthetase 1 protein [synthetic construct]
 gi|190691653|gb|ACE87601.1| argininosuccinate synthetase 1 protein [synthetic construct]
 gi|261858400|dbj|BAI45722.1| argininosuccinate synthetase 1 [synthetic construct]
          Length = 412

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 21/48 (43%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
          +    S +L +SGG D+S  L W  ++   V     + GQ+   E   
Sbjct: 1  MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48


>gi|258648364|ref|ZP_05735833.1| GMP synthase [Prevotella tannerae ATCC 51259]
 gi|260851533|gb|EEX71402.1| GMP synthase [Prevotella tannerae ATCC 51259]
          Length = 517

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 53/188 (28%), Gaps = 21/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS C +         +  +  D+G   K E      ++      +  
Sbjct: 213 NDKVILGLSGGVDSSVCATLLNKAIGKNLTCIFVDHGMLRKNEY--ANVLKDYEGLGLNV 270

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              + GE     LA + D                                          
Sbjct: 271 LGVNAGEKFFNDLAGVTDPEKKRKIIGKGFIDVFEEEARKIT------------------ 312

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G    D     +    TI++      L  E ++ +  PL WL K E  ++  +
Sbjct: 313 DAKWLAQGTIYPDRIESLNITGKTIKSHHNVGGLPEELNLQLCEPLEWLFKDEVRRVGYE 372

Query: 187 IGGQDLVN 194
           +G  + + 
Sbjct: 373 LGMPEHLI 380


>gi|109111754|ref|XP_001095864.1| PREDICTED: argininosuccinate synthase-like isoform 4 [Macaca
          mulatta]
          Length = 412

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 21/48 (43%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
          +    S +L +SGG D+S  L W  ++   V     + GQ+   E   
Sbjct: 1  MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48


>gi|325144442|gb|EGC66742.1| tRNA(Ile)-lysidine synthase [Neisseria meningitidis M01-240013]
          Length = 445

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/196 (11%), Positives = 45/196 (22%), Gaps = 31/196 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELM 64
               +  SGG DS   L   +    +     + L   +G                     
Sbjct: 31  KKTAVALSGGLDSVVLLHLLVRAGKKGGFIPDALHIHHG-----LSPRADDWADFCQNYC 85

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L    +        I  ++  K  A   +           R+     F   +A 
Sbjct: 86  DMLGVGLETVKVCVEKNGLGIEAAARQKRYAAFAEKGFDVLALAHHRDDQIETFMLAVAR 145

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G+  +        +                           +  PL+   + + W  A
Sbjct: 146 GGGLRALAAMPAVRPFGEKGI----------------------IWRPLLPFSRQDIWDYA 183

Query: 185 QDIGGQDLVNLILEES 200
           Q  G  ++ +    ++
Sbjct: 184 QKHGLPNIEDESNTDT 199


>gi|167618733|ref|ZP_02387364.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia thailandensis Bt4]
          Length = 386

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 43/189 (22%), Gaps = 10/189 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS       ++   V  L     + +     C         + +   
Sbjct: 3   KRRVVVGMSGGVDSSVTAWLLKEQGYDVIGLFMKNWEDDDDGEYCSTRQ-----DWIDVV 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +      +            +      +      PN  V     I        A  LG
Sbjct: 58  SVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLG 117

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G                    T         L          PL  + K +  +
Sbjct: 118 AETIATGHYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTKVRE 177

Query: 183 LAQDIGGQD 191
           +A  IG  +
Sbjct: 178 IAAQIGLPN 186


>gi|83719254|ref|YP_441804.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia thailandensis
           E264]
 gi|257137971|ref|ZP_05586233.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia thailandensis
           E264]
 gi|123537507|sp|Q2SZ45|MNMA_BURTA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|83653079|gb|ABC37142.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia thailandensis E264]
          Length = 386

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 43/189 (22%), Gaps = 10/189 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS       ++   V  L     + +     C         + +   
Sbjct: 3   KRRVVVGMSGGVDSSVTAWLLKEQGYDVIGLFMKNWEDDDDGEYCSTRQ-----DWIDVV 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +      +            +      +      PN  V     I        A  LG
Sbjct: 58  SVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLG 117

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G                    T         L          PL  + K +  +
Sbjct: 118 AETIATGHYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTKVRE 177

Query: 183 LAQDIGGQD 191
           +A  IG  +
Sbjct: 178 IAAQIGLPN 186


>gi|332157672|ref|YP_004422951.1| hypothetical protein PNA2_0030 [Pyrococcus sp. NA2]
 gi|331033135|gb|AEC50947.1| hypothetical protein PNA2_0030 [Pyrococcus sp. NA2]
          Length = 427

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 26/61 (42%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +  +A++ +SGG+DS+  L  A   FD V  +         +  E    V  K+   + K
Sbjct: 230 QDKTAIVPWSGGKDSTAALILASKVFDEVTAVYVKMEYEMPLTEEYIERVASKLGIDLIK 289

Query: 67  W 67
            
Sbjct: 290 V 290


>gi|319901314|ref|YP_004161042.1| GMP synthase (glutamine-hydrolyzing) [Bacteroides helcogenes P
           36-108]
 gi|319416345|gb|ADV43456.1| GMP synthase (glutamine-hydrolyzing) [Bacteroides helcogenes P
           36-108]
          Length = 517

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 58/188 (30%), Gaps = 21/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS             +  +  D+G                   L+ K
Sbjct: 213 NDRVILGLSGGVDSSVAAVLLNRAIGKNLTCIFVDHG-------------------LLRK 253

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +          L +      +S      ++   +      + GR+ I +  A       
Sbjct: 254 DEFKNVMHDYECLGLNVIGVDASAKFFKDLEGVTDPEQKRKIIGRDFIEVFDAEAHKIT- 312

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G    D     +    TI++      L  E ++ +  PL WL K E  ++ ++
Sbjct: 313 DARWLAQGTIYPDRIESLNITGKTIKSHHNVGGLPEEMNLKLCEPLQWLFKDEVRRVGRE 372

Query: 187 IGGQDLVN 194
           +G  + + 
Sbjct: 373 LGMPEHLI 380


>gi|315186510|gb|EFU20269.1| argininosuccinate synthase [Spirochaeta thermophila DSM 6578]
          Length = 421

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 65/198 (32%), Gaps = 8/198 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +K+    +L +SGG D+S  + W  ++     V  +  D GQ+   E   +  +     +
Sbjct: 1   MKEIKKIVLAYSGGLDTSIIIPWLKEQYPGCEVVAVCTDVGQKEDWEALKQKAIASGASK 60

Query: 63  LM-PKWKDSLGEDHILPLAILGDISHSSLT--KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +     K+ L  D+I P+   G I         ++A  +Q        +           
Sbjct: 61  IYVLDVKEELVRDYIFPMLRAGAIYEGKYLLGTSIARPLQAKKQVEIALKEGADAVAHGC 120

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLK 176
                      +               R   IR+ E AI    +  +    +    ++ +
Sbjct: 121 TGKGNDQVRFELTYKALAPHLEIIAPWRMWDIRSREQAIEYAQKHGIPLGNISKKNIYSR 180

Query: 177 KYETWKLAQDIGGQDLVN 194
            +  W ++ + G  + + 
Sbjct: 181 DWNIWHISHEGGILEDLW 198


>gi|302308231|ref|NP_985087.2| AER230Cp [Ashbya gossypii ATCC 10895]
 gi|299789355|gb|AAS52911.2| AER230Cp [Ashbya gossypii ATCC 10895]
          Length = 414

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 5/59 (8%)

Query: 5  IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + +    + L +SGG D+S  L+W L++   V     + GQ  + + +       KI  
Sbjct: 1  MARGK--VCLAYSGGLDTSVILAWLLEQGYEVVAFMANVGQ--EEDFQAAEEKALKIGA 55


>gi|283457610|ref|YP_003362194.1| GMP synthase [Rothia mucilaginosa DY-18]
 gi|283133609|dbj|BAI64374.1| GMP synthase [Rothia mucilaginosa DY-18]
          Length = 530

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 52/187 (27%), Gaps = 11/187 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DSS   +       D++     D+G   + E E          ++   
Sbjct: 225 SDRVICALSGGVDSSVAAALVHKAVGDQLTCFFIDHGLLREGERE----------QVEQD 274

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  S+G   I        +S          K +                L+  A      
Sbjct: 275 YAASMGIKVITIDESERFLSALEGVTEPEAKRKAIGREFIRSFEEAQRKLIAEAGEEGAD 334

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +               I++      L  +    +  PL  L K E   + ++
Sbjct: 335 IKFLVQGTLYPDVVESGGGDGTANIKSHHNVGGLPDDLTFELVEPLRTLFKDEVRAIGRE 394

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 395 LGVPEKI 401


>gi|256845062|ref|ZP_05550520.1| tRNA methyl transferase [Fusobacterium sp. 3_1_36A2]
 gi|256718621|gb|EEU32176.1| tRNA methyl transferase [Fusobacterium sp. 3_1_36A2]
          Length = 362

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 52/185 (28%), Gaps = 17/185 (9%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +  SGG DSST       +   +  ++       K E      V   +            
Sbjct: 28  VAMSGGVDSSTVAYLLKQQGYDIFGVTMKTF---KDEDSDAKKVCDDLG----------I 74

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           E ++L +    +     +   V   +         V  R  I            G + + 
Sbjct: 75  EHYVLDVR--NEFKEKVMDYFVNEYMNGRTPNPCMVCNR-HIKFGKMLDFILSKGASFMA 131

Query: 133 IGVCETDYSGYPDCRHD-TIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
            G      +G      D     +     +  +    +  P+  L+K +  +LA+ IG + 
Sbjct: 132 TGHYTKLKNGLLSVGDDSNKDQVYFLSQIEKDRLSKIIFPVGDLEKTKLRELAKQIGVRV 191

Query: 192 LVNLI 196
                
Sbjct: 192 YSKKD 196


>gi|291087963|ref|ZP_06348006.2| GMP synthase [Clostridium sp. M62/1]
 gi|291073391|gb|EFE10755.1| GMP synthase [Clostridium sp. M62/1]
          Length = 509

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 53/189 (28%), Gaps = 21/189 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   L   SGG DSS            ++  +  D+G   K E +    V          
Sbjct: 211 SGRVLCALSGGVDSSVAAVMMAKAVGKQLTCVFVDHGLLRKNEGDEVEAV---------- 260

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G +    L  +   +       +A        P          F+      A ++
Sbjct: 261 ----FGPNGPYDLNFIRVNAQQRFYDKLA----GETDPEKKRKIIGEEFIRVFEEEAKKI 312

Query: 127 GI-TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLA 184
           G    +V G    D       +   I++      L        +  PL  L K E  K  
Sbjct: 313 GAVDFLVQGTIYPDVIESGLGKSAVIKSHHNVGGLPEHVDFKEIIEPLRMLFKDEVRKAG 372

Query: 185 QDIGGQDLV 193
            ++G  + +
Sbjct: 373 LELGIPEHL 381


>gi|219681627|ref|YP_002468013.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)]
 gi|219624470|gb|ACL30625.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)]
          Length = 368

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 48/183 (26%), Gaps = 15/183 (8%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--------RLCVRKKIVELM 64
           +  SGG DSS C      +  +VE L     + +  E  C           + KK+   +
Sbjct: 11  VAMSGGVDSSVCAWILKKQNYQVEGLFMKNWEEDDQEGYCSSTKDLLDAENICKKLNIYL 70

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            K   S      +    L +    +           + L N  +     +        A 
Sbjct: 71  HKMNFSSEYWEYVFENFLKEYKKGNTPNP-------DILCNKEIKFNMFLNYSIQELKAD 123

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            +   +                             L       +  P+  LKK +   +A
Sbjct: 124 YIATGHYARIKKINGKYLLLKGIDTNKDQSYFLYTLNSIQLRKILFPIGHLKKNKVRNIA 183

Query: 185 QDI 187
           + I
Sbjct: 184 KKI 186


>gi|146301177|ref|YP_001195768.1| argininosuccinate synthase [Flavobacterium johnsoniae UW101]
 gi|146155595|gb|ABQ06449.1| Argininosuccinate synthase [Flavobacterium johnsoniae UW101]
          Length = 397

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 46/148 (31%), Gaps = 12/148 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L +SGG D+S CL +   ++   V T+  D G  +  EL        ++       
Sbjct: 2   KKVVLAYSGGLDTSYCLKYLKNEKGYEVHTVLVDTGGFSAEELSAIEKRAYELGSAQHA- 60

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      L IL      ++   +   +  NN     V    +   + A   A ++G
Sbjct: 61  ----------NLTILDKYYDKAIKYLIFGNVLKNNTYPLSVSAERVFQAIEAIKYAKKVG 110

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIE 155
            T I  G                  A E
Sbjct: 111 ATAIAHGSTGAGNDQIRFDLIFQTIAPE 138


>gi|47678421|emb|CAG30331.1| dJ1163J1.4 [Homo sapiens]
 gi|109451226|emb|CAK54474.1| TRMU [synthetic construct]
 gi|109451804|emb|CAK54773.1| TRMU [synthetic construct]
 gi|119593832|gb|EAW73426.1| tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase, isoform
           CRA_e [Homo sapiens]
 gi|162844904|emb|CAP58845.1| tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase [Homo
           sapiens]
 gi|208965646|dbj|BAG72837.1| tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
           [synthetic construct]
          Length = 376

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/113 (11%), Positives = 29/113 (25%), Gaps = 9/113 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--------QRNKVELECRLCV 56
           ++     +   SGG DS+        R  +V  +                  + E    V
Sbjct: 1   MQALRHVVCALSGGVDSAVAALLLRRRGYQVTGVFMKNWDSLDEHGVCTADKDCEDAYRV 60

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
            + +     +    + E      +   +      T N  +    +   + F  
Sbjct: 61  CQILDIPFHQVS-YVKEYWNDVFSDFLNEYEKGRTPNPDIVCNKHIKFSCFFH 112


>gi|88607883|ref|YP_505483.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Anaplasma phagocytophilum HZ]
 gi|123494742|sp|Q2GJG8|MNMA_ANAPZ RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|88598946|gb|ABD44416.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Anaplasma phagocytophilum HZ]
          Length = 378

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/183 (12%), Positives = 49/183 (26%), Gaps = 8/183 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           + ++  SGG DSS           +V   +               C    I +       
Sbjct: 20  TVVVAMSGGVDSSVVAVLLHKMGYKVIGATMQLYSSPNASSGKSCCGNADIYDAKKVAAS 79

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                ++L      ++    + ++     +    P   +     +       +A  +G  
Sbjct: 80  FGFPHYVLN---YEEVFRKEVIEDFVNSYKAGETPIPCIKCNQTVKFRDMLKMARTIGGD 136

Query: 130 NIVIGVCETDYSGY-----PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            +  G                 +           ++ +E    V  PL  L K +  K+A
Sbjct: 137 VVATGHYVRRLEVEGELQIWSGKDKNKDQSYFLFSMTLEQLKFVRFPLGNLVKGDVRKIA 196

Query: 185 QDI 187
           Q +
Sbjct: 197 QYL 199


>gi|325473540|gb|EGC76733.1| tRNA-specific 2-thiouridylase mnmA [Treponema denticola F0402]
          Length = 383

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 34/129 (26%), Gaps = 6/129 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DS+      +D+   V  ++    Q               I +       
Sbjct: 19  KVLVGLSGGVDSAVAAKLLIDQGYDVTGVTM---QLLPKLSGIYKEQTDDIEDAKKVAAK 75

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              +  +     + +   + +      + +    PN      + I        A + G  
Sbjct: 76  LGIKHIVYD---MRETFKAEIIDYFVEEYKQGRTPNPCFICNSKIKFGLFLEQALKDGFD 132

Query: 130 NIVIGVCET 138
            I  G    
Sbjct: 133 KIATGHYAK 141


>gi|322434612|ref|YP_004216824.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acidobacterium sp. MP5ACTX9]
 gi|321162339|gb|ADW68044.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acidobacterium sp. MP5ACTX9]
          Length = 379

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 48/153 (31%), Gaps = 5/153 (3%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQR----NKVELECRLC 55
           M+D+ +   +  +  SGG DSS   +   ++   +  L+   + QR    ++   E    
Sbjct: 1   MSDLSQIPETIAVAMSGGVDSSAVAALLHEQGYDLIGLTLQLWNQRRLAGHEGMPESVQG 60

Query: 56  VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
               I ++    + +        L    +   + + K    +      P       N + 
Sbjct: 61  RCCSIDDVYDARRVAEKIGIPYYLVNQQERFEADVVKPFVSEYLAGRTPIPCTLCNNHLK 120

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRH 148
                  A ++G T I  G    +       R 
Sbjct: 121 FDQLLLTARQVGATKIATGHYARNRFDEATGRW 153


>gi|297271080|ref|XP_002800187.1| PREDICTED: argininosuccinate synthase-like [Macaca mulatta]
          Length = 393

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 21/48 (43%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
          +    S +L +SGG D+S  L W  ++   V     + GQ+   E   
Sbjct: 1  MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48


>gi|296109904|ref|YP_003616853.1| argininosuccinate synthase [Methanocaldococcus infernus ME]
 gi|295434718|gb|ADG13889.1| argininosuccinate synthase [Methanocaldococcus infernus ME]
          Length = 388

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/35 (40%), Positives = 20/35 (57%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
           A+L +SGG D+S CL    D+   V ++  D GQ
Sbjct: 2  KAVLAYSGGLDTSCCLKLLEDQGYEVISVCVDVGQ 36


>gi|15613824|ref|NP_242127.1| (5-methylaminomethyl-2-thiouridylate)-methyltran sferase [Bacillus
           halodurans C-125]
 gi|14195281|sp|Q9KDF2|MNMA_BACHD RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|10173877|dbj|BAB04980.1| (5-methylaminomethyl-2-thiouridylate)- methyltransferase [Bacillus
           halodurans C-125]
          Length = 371

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 53/194 (27%), Gaps = 12/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKK 59
           M     +    ++  SGG DSS       ++   V  +   ++   ++  +       + 
Sbjct: 1   MEAKRPEQTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVCTATEDYQD 60

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +V++  +   +        +    +      T  +             +     I     
Sbjct: 61  VVQVCNQLGIAYYA-----VNFEKEYWDKVFTYFLEEYKAGRTPNPDVMC-NKEIKFKAF 114

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN-----LGMESHVTVHTPLMW 174
              A  LG   +  G      +     +    +            L  +    V  PL  
Sbjct: 115 LNHALTLGADYVATGHYAQVKNVDGQYQLIRGKDPNKDQTYFLNALSQQQLSRVMFPLGH 174

Query: 175 LKKYETWKLAQDIG 188
           L+K E   +A+  G
Sbjct: 175 LEKKEVRAIAERAG 188


>gi|325140361|gb|EGC62883.1| tRNA(Ile)-lysidine synthase [Neisseria meningitidis CU385]
          Length = 445

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/196 (11%), Positives = 45/196 (22%), Gaps = 31/196 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELM 64
               +  SGG DS   L   +    +     + L   +G                     
Sbjct: 31  KKTAVALSGGLDSVVLLHLLVRAGKKGGFIPDALHIHHG-----LSPRADDWADFCQNYC 85

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L    +        I  ++  K  A   +           R+     F   +A 
Sbjct: 86  DMLGVGLETVKVCVEKNGLGIEAAARQKRYAAFAEKGFDVLALAHHRDDQIETFMLAVAR 145

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G+  +        +                           +  PL+   + + W  A
Sbjct: 146 GGGLRALAAMPAVRPFGEKGI----------------------IWRPLLPFSRQDIWDYA 183

Query: 185 QDIGGQDLVNLILEES 200
           Q  G  ++ +    ++
Sbjct: 184 QKHGLPNIEDESNTDT 199


>gi|315638963|ref|ZP_07894134.1| GMP synthase [Campylobacter upsaliensis JV21]
 gi|315480992|gb|EFU71625.1| GMP synthase [Campylobacter upsaliensis JV21]
          Length = 517

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 50/194 (25%), Gaps = 15/194 (7%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
           + + +      L   SGG DSS   +       + +  +  D G   K E E    + ++
Sbjct: 210 LREKVSNGGKVLCAVSGGVDSSVVATLLYRAIGENLIPVFVDTGLLRKGEREAVEAMFRE 269

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                    +      +     L       +T+    +                      
Sbjct: 270 ---------NLKVPLIVADAKELFLGRLKGVTEPEQKRKIIGETFIEVFEAEAKKHNTKG 320

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
                  G         +   S        TI++      L       +  PL  L K E
Sbjct: 321 EIKFLAQG-----TLYPDVIESVSVKGPSKTIKSHHNVGGLPEWMKFELIEPLRELFKDE 375

Query: 180 TWKLAQDIGGQDLV 193
              L +++G  + +
Sbjct: 376 VRALGRELGMPESM 389


>gi|310657611|ref|YP_003935332.1| gmp synthetase [Clostridium sticklandii DSM 519]
 gi|308824389|emb|CBH20427.1| GMP synthetase (glutamine aminotransferase) [Clostridium
           sticklandii]
          Length = 509

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 49/188 (26%), Gaps = 20/188 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D +  +  D+G   K E +    + +         
Sbjct: 215 KKTLCALSGGVDSSVAAVLVHKAIGDNLTCIFVDHGLLRKNEGDDVERIFR--------- 265

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                ++  + L  +                +           R              L 
Sbjct: 266 -----DEFSMNLIRVNAQERFLSKLAGVTDPERKRKIIGEEFIRVFEEESKKLGDVEFLV 320

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I   V E+            I++      L  +  +++  PL  L K E   +  ++
Sbjct: 321 QGTIYPDVIESGT-----DEAAVIKSHHNVGGLPEDMKLSLVEPLRELFKDEVRNVGLEL 375

Query: 188 GGQDLVNL 195
           G  + +  
Sbjct: 376 GIPEYLIF 383


>gi|239907289|ref|YP_002954030.1| argininosuccinate synthase [Desulfovibrio magneticus RS-1]
 gi|239797155|dbj|BAH76144.1| argininosuccinate synthase [Desulfovibrio magneticus RS-1]
          Length = 397

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQ 44
          +      +L +SGG D+S  L W    +   V T++ D GQ
Sbjct: 1  MSTIKKVVLAYSGGLDTSVILKWIKKTYNCEVITVTCDLGQ 41


>gi|25298369|pir||C84960 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC
           2.1.1.61) [imported] - Buchnera sp. (strain APS)
 gi|10038936|dbj|BAB12971.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Buchnera aphidicola str. APS (Acyrthosiphon pisum)]
          Length = 392

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 48/183 (26%), Gaps = 15/183 (8%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--------RLCVRKKIVELM 64
           +  SGG DSS C      +  +VE L     + +  E  C           + KK+   +
Sbjct: 35  VAMSGGVDSSVCAWILKKQNYQVEGLFMKNWEEDDQEGYCSSTKDLLDAENICKKLNIYL 94

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            K   S      +    L +    +           + L N  +     +        A 
Sbjct: 95  HKMNFSSEYWEYVFENFLKEYKKGNTPNP-------DILCNKEIKFNMFLNYSIQELKAD 147

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            +   +                             L       +  P+  LKK +   +A
Sbjct: 148 YIATGHYARIKKINGKYLLLKGIDTNKDQSYFLYTLNSIQLRKILFPIGHLKKNKVRNIA 207

Query: 185 QDI 187
           + I
Sbjct: 208 KKI 210


>gi|333029309|ref|ZP_08457370.1| tRNA-specific 2-thiouridylase mnmA [Bacteroides coprosuis DSM
          18011]
 gi|332739906|gb|EGJ70388.1| tRNA-specific 2-thiouridylase mnmA [Bacteroides coprosuis DSM
          18011]
          Length = 371

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 8/88 (9%), Positives = 22/88 (25%), Gaps = 3/88 (3%)

Query: 6  KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +    L+  SGG DSS      +++      ++         E      +  ++     
Sbjct: 10 NRNKRVLVGLSGGIDSSATCIMLMEQGYTPIGVTMQVWGDAPSE---AKELADRLGMEHY 66

Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKN 93
             +       +    + +         
Sbjct: 67 IADERDDFKASVVKNFIDEYRSGRTPNP 94


>gi|308751119|gb|ADO44602.1| argininosuccinate synthase [Hydrogenobacter thermophilus TK-6]
          Length = 401

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 4/67 (5%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ----RNKVELECRLCVRKK 59
          ++  +   +L +SGG D+S  + W  ++   V T + D GQ     +  E   +    + 
Sbjct: 1  MLIMSKRVILAYSGGLDTSVMVRWLTEKGYEVITYTADVGQGEELSHIPEKARQAGAVEA 60

Query: 60 IVELMPK 66
          IVE + +
Sbjct: 61 IVEDLKE 67


>gi|219682184|ref|YP_002468568.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)]
 gi|219621917|gb|ACL30073.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)]
          Length = 368

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 48/183 (26%), Gaps = 15/183 (8%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--------RLCVRKKIVELM 64
           +  SGG DSS C      +  +VE L     + +  E  C           + KK+   +
Sbjct: 11  VAMSGGVDSSVCAWILKKQNYQVEGLFMKNWEEDDQEGYCSSTKDLLDAENICKKLNIYL 70

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            K   S      +    L +    +           + L N  +     +        A 
Sbjct: 71  HKMNFSSEYWEYVFENFLKEYKKGNTPNP-------DILCNKEIKFNMFLNYSIQELKAD 123

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            +   +                             L       +  P+  LKK +   +A
Sbjct: 124 YIATGHYARIKKINGKYLLLKGIDTNKDQSYFLYTLNSIQLRKILFPIGHLKKNKVRNIA 183

Query: 185 QDI 187
           + I
Sbjct: 184 KKI 186


>gi|254479732|ref|ZP_05093019.1| PP-loop family protein [Carboxydibrachium pacificum DSM 12653]
 gi|214034329|gb|EEB75116.1| PP-loop family protein [Carboxydibrachium pacificum DSM 12653]
          Length = 310

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 9/65 (13%), Positives = 16/65 (24%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
             ++      ++  SGG+DS             V     D G            V +   
Sbjct: 41  YKMLPPKGRVVVAISGGKDSLVTAYVLKRLGYEVLGFFVDLGITQNDFSPRSREVVENFC 100

Query: 62  ELMPK 66
           +    
Sbjct: 101 KEHDI 105


>gi|77358707|ref|YP_338292.1| tRNA(Ile)-lysidine synthetase [Neisseria meningitidis MC58]
 gi|77358709|ref|YP_338291.1| tRNA(Ile)-lysidine synthetase [Neisseria meningitidis MC58]
 gi|218768194|ref|YP_002342706.1| hypothetical protein NMA1350 [Neisseria meningitidis Z2491]
 gi|61216742|sp|Q9JUE9|TILS_NEIMA RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|73919876|sp|Q4W568|TILS_NEIMB RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|66731914|gb|AAY52148.1| tRNA(Ile)-lysidine synthetase [Neisseria meningitidis MC58]
 gi|66731931|gb|AAY52164.1| tRNA(Ile)-lysidine synthetase [Neisseria meningitidis MC58]
 gi|121052202|emb|CAM08525.1| hypothetical protein NMA1350 [Neisseria meningitidis Z2491]
 gi|325134335|gb|EGC56981.1| tRNA(Ile)-lysidine synthase [Neisseria meningitidis M13399]
 gi|325200183|gb|ADY95638.1| tRNA(Ile)-lysidine synthase [Neisseria meningitidis H44/76]
 gi|325206037|gb|ADZ01490.1| tRNA(Ile)-lysidine synthase [Neisseria meningitidis M04-240196]
          Length = 426

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/196 (11%), Positives = 45/196 (22%), Gaps = 31/196 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELM 64
               +  SGG DS   L   +    +     + L   +G                     
Sbjct: 12  KKTAVALSGGLDSVVLLHLLVRAGKKGGFIPDALHIHHG-----LSPRADDWADFCQNYC 66

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L    +        I  ++  K  A   +           R+     F   +A 
Sbjct: 67  DMLGVGLETVKVCVEKNGLGIEAAARQKRYAAFAEKGFDVLALAHHRDDQIETFMLAVAR 126

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G+  +        +                           +  PL+   + + W  A
Sbjct: 127 GGGLRALAAMPAVRPFGEKGI----------------------IWRPLLPFSRQDIWDYA 164

Query: 185 QDIGGQDLVNLILEES 200
           Q  G  ++ +    ++
Sbjct: 165 QKHGLPNIEDESNTDT 180


>gi|312875894|ref|ZP_07735884.1| GMP synthase, large subunit [Caldicellulosiruptor lactoaceticus 6A]
 gi|311797375|gb|EFR13714.1| GMP synthase, large subunit [Caldicellulosiruptor lactoaceticus 6A]
          Length = 511

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 55/189 (29%), Gaps = 23/189 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DSS             +  +  D+G   K E +  + + K        
Sbjct: 215 SQKVVCALSGGVDSSVAAVLVHKAIGKNLYCIFVDHGLLRKGEADEVMSIFKD------- 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                            ++            ++    P          F+      A +L
Sbjct: 268 -------------QFDMNVIKVDAKDRFLEALRGVTDPEEKRKIIGREFIRVFEEEAEKL 314

Query: 127 G-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-VHTPLMWLKKYETWKLA 184
           G I  +V G    D       +  TI++      L  +     +  PL  L K E  ++ 
Sbjct: 315 GDIKFLVQGTIYPDVVESGVGKAATIKSHHNVGGLPQKIKFEKIIEPLRELFKDEVRRVG 374

Query: 185 QDIGGQDLV 193
            ++G  + +
Sbjct: 375 IELGIPEKI 383


>gi|312793609|ref|YP_004026532.1| gmp synthase, large subunit [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312180749|gb|ADQ40919.1| GMP synthase, large subunit [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 511

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 55/189 (29%), Gaps = 23/189 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DSS             +  +  D+G   K E +  + + K        
Sbjct: 215 SQKVVCALSGGVDSSVAAVLVHKAIGKNLYCIFVDHGLLRKGEADEVMSIFKD------- 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                            ++            ++    P          F+      A +L
Sbjct: 268 -------------QFDMNVIKVDAKDRFLEALRGVTDPEEKRKIIGREFIRVFEEEAEKL 314

Query: 127 G-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-VHTPLMWLKKYETWKLA 184
           G I  +V G    D       +  TI++      L  +     +  PL  L K E  ++ 
Sbjct: 315 GDIKFLVQGTIYPDVVESGVGKAATIKSHHNVGGLPQKIKFEKIIEPLRELFKDEVRRVG 374

Query: 185 QDIGGQDLV 193
            ++G  + +
Sbjct: 375 IELGIPEKI 383


>gi|303234693|ref|ZP_07321321.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Finegoldia magna BVS033A4]
 gi|302494176|gb|EFL53954.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Finegoldia magna BVS033A4]
          Length = 366

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/189 (11%), Positives = 53/189 (28%), Gaps = 11/189 (5%)

Query: 5   IKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  +    ++  SGG DSS        +   V  +        + + +      +   + 
Sbjct: 1   MDNSKIKVVVGISGGVDSSVAALLLKQQGYDVVGIFMKNWD--ETDDDGVCTAEEDYKDA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +    +   + + +         +  +      + +    PN  +     I        A
Sbjct: 59  VAVANEIGIDYYSIN---FEKEYYDRVFTYFLDEYKKGRTPNPDIMCNKEIKFKAFLDFA 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            +LG   +  G       G    +      +          L  +    V  P+  L+K 
Sbjct: 116 MKLGADYVATGHYARIERGDDGVKLLRGLDNNKDQTYFLSQLTQDQIKNVMFPVGELQKK 175

Query: 179 ETWKLAQDI 187
           E  ++A+  
Sbjct: 176 EVREIAKKY 184


>gi|329733069|gb|EGG69406.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus 21193]
          Length = 372

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 49/191 (25%), Gaps = 11/191 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  K    ++  SGG DSS       ++   V  +             C     +   ++
Sbjct: 1   MSNKDIRVVIGMSGGVDSSVTAHVLKEQGYDVIGIFMKNWDDTDENGVC--TATEDYNDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +          + +            +      + +    PN  V     I        A
Sbjct: 59  IEVCNQIGIPYYAVN---FEKEYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLDHA 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLKK 177
             LG   +  G     +                         L  +    V  P+  ++K
Sbjct: 116 MNLGADYVATGHYARIHRHEDGHVEMLRGVDNNKDQTYFLNQLSQQQLSKVMFPIGDIEK 175

Query: 178 YETWKLAQDIG 188
            E  ++A++ G
Sbjct: 176 SEVRRIAEEQG 186


>gi|328772493|gb|EGF82531.1| hypothetical protein BATDEDRAFT_9716 [Batrachochytrium
          dendrobatidis JAM81]
          Length = 417

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 3/74 (4%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL +SGG D+S  L+W +++   V     + GQ  + + E       KI      +
Sbjct: 7  KGKVLLAYSGGLDTSCILAWLIEQGYEVIAYIANIGQ--EEDFEVARLKALKIGA-TKVF 63

Query: 68 KDSLGEDHILPLAI 81
           + L ++ +  L  
Sbjct: 64 IEDLRKEFVEDLIW 77


>gi|323128291|gb|ADX25588.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus dysgalactiae
           subsp. equisimilis ATCC 12394]
          Length = 373

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 48/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MTD--NSNTRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A  LG   +  G             H    A            L  +       PL  
Sbjct: 114 DYAMTLGADYVATGHYAQVKRDEDGTVHMLRGADNGKDQTYFLSQLSQKQLQKTLFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  ++A+  G
Sbjct: 174 LQKPEVRQIAERAG 187


>gi|157813144|gb|ABV81317.1| putative GMP synthetase [Cypridopsis vidua]
          Length = 218

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 20/64 (31%), Gaps = 2/64 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              L+L SGG DS+            D++  +  + G   K E         K+   +  
Sbjct: 44  KKVLMLLSGGIDSTVSSLLLRKALSDDQIHAVFINNGFMRKNEPAEVEQNLNKLGLKVKM 103

Query: 67  WKDS 70
               
Sbjct: 104 VDAF 107


>gi|83816193|ref|YP_445830.1| tRNA(Ile)-lysidine synthetase [Salinibacter ruber DSM 13855]
 gi|83757587|gb|ABC45700.1| tRNA(Ile)-lysidine synthetase [Salinibacter ruber DSM 13855]
          Length = 468

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 19/43 (44%)

Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR 53
           L+  SGG DS TCLS        V  L  +YG R   + +  
Sbjct: 24 VLVAASGGVDSMTCLSVLRRLDVDVHALHVNYGLRAGADGDEA 66


>gi|323346643|gb|EGA80928.1| Arg1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 420

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 5/59 (8%)

Query: 5  IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + K    + L +SGG D+S  L+W LD+   V     + GQ  + + +       KI  
Sbjct: 1  MSKGK--VCLAYSGGLDTSVILAWLLDQGYEVXAFMANVGQ--EEDFDAAKEKALKIGA 55


>gi|307564524|ref|ZP_07627065.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella amnii CRIS 21A-A]
 gi|307346884|gb|EFN92180.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella amnii CRIS 21A-A]
          Length = 387

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/183 (11%), Positives = 43/183 (23%), Gaps = 7/183 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K     +L SGG DSS  +          +      G +   + +C     + +      
Sbjct: 7   KHKKIAVLLSGGVDSSVVVWELARIGLHPDCYYIKIGPKEADQWDCTSE--EDLEMATAV 64

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            K    +  ++      +         +             +  R I F  F     +  
Sbjct: 65  AKRFGCKLEVVD--CHKEYWGEVTKYTMDKVRVGLTPNPDVMCNRLIKFGAFYKKKGHEY 122

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKL 183
            +             G            +    L       +     P+    K E  ++
Sbjct: 123 DLIATGHYAQTKWIDGKKWLCTSPDAVKDQTDFLSQIYPWQLQKAIFPIGHYAKDEVRRI 182

Query: 184 AQD 186
           A+ 
Sbjct: 183 AER 185


>gi|302871771|ref|YP_003840407.1| GMP synthase, large subunit [Caldicellulosiruptor obsidiansis OB47]
 gi|302574630|gb|ADL42421.1| GMP synthase, large subunit [Caldicellulosiruptor obsidiansis OB47]
          Length = 511

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 59/189 (31%), Gaps = 23/189 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS             +  +  D+G   K E E  + V +        
Sbjct: 215 NQKVVCALSGGVDSSVAAVLVHKAIGKNLYCIFVDHGLLRKGEAEEVMSVFRD------- 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                  D  +      D   S+L   +  + +   +   F        +      A +L
Sbjct: 268 -----KFDMNVIKVDAKDRFLSALRGVIDPEEKRKIIGREF--------IRVFEEEAEKL 314

Query: 127 G-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-VHTPLMWLKKYETWKLA 184
           G I  +V G    D       +  TI++      L  +     +  PL  L K E  ++ 
Sbjct: 315 GDIKFLVQGTIYPDVVESGVGKAATIKSHHNVGGLPEKIKFEKIIEPLRELFKDEVRRVG 374

Query: 185 QDIGGQDLV 193
            ++G  + +
Sbjct: 375 IELGIPEKI 383


>gi|319441115|ref|ZP_07990271.1| tRNA-specific 2-thiouridylase MnmA [Corynebacterium variabile DSM
           44702]
          Length = 364

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 56/204 (27%), Gaps = 6/204 (2%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK-KIVELMPKWKDSLGE 73
            SGG DSS   + AL     V  +     Q  +            +      +  DSLG 
Sbjct: 1   MSGGVDSSVAAARALAEGHEVIGVHLALSQSPEAVRAGSRGCCSLEDSADARRVCDSLGI 60

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
              +      D   + +  N     +    PN  +     I        +  LG   +V 
Sbjct: 61  PFYVW--DFSDRFKADVIDNFVESYEIGETPNPCLRCNEKIKFEALLDRSIALGFDAVVT 118

Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK-KYETWKLAQDIGGQDL 192
           G     + G      D  +     + +  +  +      +    K      A+D+G    
Sbjct: 119 GHYAQLHDGVLRRGIDDNKDQSYVLGVLTDEQLAHCMFPVGDTVKPAIRAEAKDLGMGVA 178

Query: 193 VNLILEESHTCYLGKRDKRYEWGY 216
                 +   C++     +   G 
Sbjct: 179 SKPDSHDI--CFIPDGRTQAFLGT 200


>gi|316985031|gb|EFV63984.1| tRNA(Ile)-lysidine synthetase [Neisseria meningitidis H44/76]
          Length = 436

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/196 (11%), Positives = 45/196 (22%), Gaps = 31/196 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELM 64
               +  SGG DS   L   +    +     + L   +G                     
Sbjct: 22  KKTAVALSGGLDSVVLLHLLVRAGKKGGFIPDALHIHHG-----LSPRADDWADFCQNYC 76

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L    +        I  ++  K  A   +           R+     F   +A 
Sbjct: 77  DMLGVGLETVKVCVEKNGLGIEAAARQKRYAAFAEKGFDVLALAHHRDDQIETFMLAVAR 136

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G+  +        +                           +  PL+   + + W  A
Sbjct: 137 GGGLRALAAMPAVRPFGEKGI----------------------IWRPLLPFSRQDIWDYA 174

Query: 185 QDIGGQDLVNLILEES 200
           Q  G  ++ +    ++
Sbjct: 175 QKHGLPNIEDESNTDT 190


>gi|315640033|ref|ZP_07895158.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus italicus DSM 15952]
 gi|315484161|gb|EFU74632.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus italicus DSM 15952]
          Length = 378

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 45/192 (23%), Gaps = 13/192 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 6   MKD--NSNTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 61

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 62  KDVAKVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 118

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMW 174
             A  LG   +  G             H                 L  E       PL  
Sbjct: 119 DYALDLGADYVATGHYAQVVRDEDGLTHMLRGVDNNKDQTYFLSQLSQEQLAKTMFPLGG 178

Query: 175 LKKYETWKLAQD 186
           ++K E   +AQ 
Sbjct: 179 MEKSEVRAIAQR 190


>gi|261838378|gb|ACX98144.1| guanosine-5'-monophosphate synthase [Helicobacter pylori 51]
          Length = 508

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 52/182 (28%), Gaps = 16/182 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DS+   +       D +  +  D+G   K E E    + K +     +
Sbjct: 209 NDKVLCAVSGGVDSTVVATLLHRAIKDNLIAVFVDHGLLRKNEKERVQAMFKDL-----Q 263

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +  +   + L+ L  +S   L + +            F        L        ++
Sbjct: 264 IPLNTIDAKEIFLSKLKGVSEPELKRKII----GETFIEVFEKEAKKHHLKG------KI 313

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                     +   S         I+       L       +  PL  L K E   L ++
Sbjct: 314 EFLAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEVRLLGKE 373

Query: 187 IG 188
           +G
Sbjct: 374 LG 375


>gi|254804970|ref|YP_003083191.1| putative cell cycle protein MesJ [Neisseria meningitidis alpha14]
 gi|254668512|emb|CBA05883.1| putative cell cycle protein MesJ [Neisseria meningitidis alpha14]
          Length = 436

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/196 (11%), Positives = 45/196 (22%), Gaps = 31/196 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELM 64
               +  SGG DS   L   +    +     + L   +G                     
Sbjct: 22  KKTAVALSGGLDSVVLLHLLVRAGKKGSFIPDALHIHHG-----LSPRADDWADFCQNYC 76

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L    +        I  ++  K  A   +           R+     F   +A 
Sbjct: 77  DMLGVGLETVKVCVEKNGLGIEAAARQKRYAAFAEKGFDVLALAHHRDDQIETFMLAVAR 136

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G+  +        +                           +  PL+   + + W  A
Sbjct: 137 GGGLRALAAMPAVRPFGEKGI----------------------IWRPLLPFSRQDIWDYA 174

Query: 185 QDIGGQDLVNLILEES 200
           Q  G  ++ +    ++
Sbjct: 175 QKHGLPNIEDESNTDT 190


>gi|134045404|ref|YP_001096890.1| PP-loop domain-containing protein [Methanococcus maripaludis C5]
 gi|132663029|gb|ABO34675.1| PP-loop domain protein [Methanococcus maripaludis C5]
          Length = 296

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 25/61 (40%), Gaps = 5/61 (8%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVE-TLSFDYGQRNKVELECRLCVRKKIVELMP 65
          K    +++ SGG+DS+  L+ A +    V   + F     +K   +      KK+ +   
Sbjct: 37 KDEKIIVMLSGGKDSAVSLAVAKELGLNVHLCVHF----VHKWSWDISTNEAKKLADRFN 92

Query: 66 K 66
           
Sbjct: 93 I 93


>gi|134046845|ref|YP_001098330.1| ExsB family protein [Methanococcus maripaludis C5]
 gi|132664470|gb|ABO36116.1| ExsB family protein [Methanococcus maripaludis C5]
          Length = 261

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 52/188 (27%), Gaps = 5/188 (2%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD--YGQRNKVELECRLCVRKKIVELM 64
           K   A++ FSGG DS T    A  +   +  ++    Y    K E         +++ + 
Sbjct: 62  KKEKAVVAFSGGVDS-TASIIAGKKIFEICAVTVRSKYIMDAKTEQNVSELA--RLLNVS 118

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            ++ D   +                    V  +I +    N          L        
Sbjct: 119 HEFIDVNLDSIFEDTKSGKYHPCGRCHSTVEAEILNYAEKNGIKYIIYGDMLSIGHLSVK 178

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++    I + +         + R                  +        ++K+   ++ 
Sbjct: 179 KVDKGIIRLNILSVLSMAKDESRTTLKEFKININQSYGCQLIRKAHKHKSMQKFTIQRIL 238

Query: 185 QDIGGQDL 192
           +++  Q +
Sbjct: 239 REVRAQVI 246


>gi|113208240|dbj|BAF03524.1| argininosuccinate synthetase [Porphyra yezoensis]
 gi|115345228|dbj|BAF33293.1| argininosuccinate synthetase [Porphyra yezoensis]
          Length = 438

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 3/74 (4%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L +SGG D+S  L W  D+   V     D GQ    + E        +      +
Sbjct: 3  KGKVVLAYSGGLDTSVILKWLQDQGYEVICFIADVGQ--TDDFEAARVKALSLGA-TKVY 59

Query: 68 KDSLGEDHILPLAI 81
           ++L ++ +     
Sbjct: 60 VENLRKEFVTDFIF 73


>gi|89100972|ref|ZP_01173817.1| TrmU [Bacillus sp. NRRL B-14911]
 gi|89084308|gb|EAR63464.1| TrmU [Bacillus sp. NRRL B-14911]
          Length = 370

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 54/193 (27%), Gaps = 15/193 (7%)

Query: 5   IKKAPS---ALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKI 60
           + K+P     ++  SGG DSS       ++   V  +   ++   ++  +       + +
Sbjct: 1   MAKSPKDTRVVVGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVCTATEDYEDV 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           + +  +            +           T  +             +     I      
Sbjct: 61  IRVCNQIGIPYYA-----VNFEKQYWDKVFTYFLDEYKAGRTPNPDVMC-NKEIKFKAFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSGY---PDCRHDTIRAIETAI--NLGMESHVTVHTPLMWL 175
             A  LG   +  G       G       R       +T     L  E    V  P+  +
Sbjct: 115 EHAMSLGADYLATGHYARVEHGENGVKMLRGLDENKDQTYFLNQLTEEQLSKVMFPIGSI 174

Query: 176 KKYETWKLAQDIG 188
           +K E  ++A+  G
Sbjct: 175 EKSEVREIAKKAG 187


>gi|332259082|ref|XP_003278617.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 [Nomascus
           leucogenys]
          Length = 421

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/113 (11%), Positives = 29/113 (25%), Gaps = 9/113 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--------QRNKVELECRLCV 56
           ++     +   SGG DS+        R  +V  +                  + E    V
Sbjct: 1   MQAVRHVVCAVSGGVDSAVAALLLRRRGYQVTGVFMKNWDSLDEHGVCTADKDCEDAYRV 60

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
            + +     +    + E      +   +      T N  +    +   + F  
Sbjct: 61  CQILDIPFHQVS-YVKEYWNDVFSDFLNEYEKGRTPNPDIVCNKHIKFSCFFH 112


>gi|302837546|ref|XP_002950332.1| argininosuccinate synthase [Volvox carteri f. nagariensis]
 gi|300264337|gb|EFJ48533.1| argininosuccinate synthase [Volvox carteri f. nagariensis]
          Length = 440

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 49/156 (31%), Gaps = 9/156 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELM- 64
           K    +L +SGG D+S  L W  D     V T + D GQ  ++E       +  + ++  
Sbjct: 38  KVKKVVLAYSGGLDTSIILKWLQDTYGCEVVTFTADLGQGEELEPARAKAEKMGVKQIFI 97

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              ++    D++ P+     +   +     ++           +  R I         A 
Sbjct: 98  DDLREEFVRDYVFPMFRANALYEGTYLLGTSIARP-------LIAKRQIEIAKEVGADAV 150

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
             G T         +   Y       + A     +L
Sbjct: 151 SHGATGKGNDQVRFEVGYYSLKPDIKVIAPWREWDL 186


>gi|282878172|ref|ZP_06286968.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella buccalis ATCC 35310]
 gi|281299590|gb|EFA91963.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella buccalis ATCC 35310]
          Length = 360

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/183 (12%), Positives = 44/183 (24%), Gaps = 7/183 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K     +L SGG DSS  +          +      G     E +C     + +      
Sbjct: 9   KDKRIAVLLSGGVDSSVVVHELAQMGLHPDCFYIKIGPEEAEEWDCSSE--EDLEMATAV 66

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                    ++      +         +             +  R I F  F A + ++ 
Sbjct: 67  AAKYGCRLQVVD--CHKEYWSEVTKYTMEKVKAGYTPNPDVMCNRLIKFGAFDAKVGHQY 124

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH---TPLMWLKKYETWKL 183
            +             G            +    L       +     P+   +K E  ++
Sbjct: 125 DLIATGHYAQTEVIDGKKWLVTSPDPVKDQTDFLAQIYDWQLKKALFPIGHYQKNEVREI 184

Query: 184 AQD 186
           A+ 
Sbjct: 185 AER 187


>gi|256821769|ref|YP_003145732.1| argininosuccinate synthase [Kangiella koreensis DSM 16069]
 gi|256795308|gb|ACV25964.1| argininosuccinate synthase [Kangiella koreensis DSM 16069]
          Length = 403

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 24/58 (41%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
              +L FSGG D+S C+ + +++   V TL  + G  ++ +          +     
Sbjct: 3  QKKVVLAFSGGLDTSFCVPYLMEKGYEVHTLFVNTGGVSREKCHQIEKRALGLGAKQH 60


>gi|169825283|ref|YP_001692894.1| 5-methylaminomethyl-2-thiouridylate- methyltransferase [Finegoldia
           magna ATCC 29328]
 gi|205816864|sp|B0S3R4|MNMA_FINM2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|167832088|dbj|BAG09004.1| 5-methylaminomethyl-2-thiouridylate- methyltransferase [Finegoldia
           magna ATCC 29328]
          Length = 366

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/189 (12%), Positives = 53/189 (28%), Gaps = 11/189 (5%)

Query: 5   IKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  +    ++  SGG DSS        +   V  +        + + +      +   + 
Sbjct: 1   MDNSKIKVVVGISGGVDSSVAALLLKQQGYDVVGIFMKNWD--ETDDDGVCTAEEDYKDA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +    +   + + +         +  +      + +    PN  +     I        A
Sbjct: 59  VAVANEIGIDYYSIN---FEKEYYDRVFTYFLDEYKKGRTPNPDIMCNKEIKFKAFLDFA 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            +LG   +  G       G    +      +          L  E    V  P+  L+K 
Sbjct: 116 MKLGADYVATGHYARIERGDDGVKLLRGLDNNKDQTYFLSQLTQEQIKNVMFPVGELQKK 175

Query: 179 ETWKLAQDI 187
           E  ++A+  
Sbjct: 176 EVREIAKKY 184


>gi|91776061|ref|YP_545817.1| argininosuccinate synthase [Methylobacillus flagellatus KT]
 gi|119361290|sp|Q1H0L1|ASSY_METFK RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|91710048|gb|ABE49976.1| argininosuccinate synthase [Methylobacillus flagellatus KT]
          Length = 406

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 50/157 (31%), Gaps = 7/157 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   V T + D GQ  ++E        ++   +
Sbjct: 1   MSDVNKVVLAYSGGLDTSVILKWLQDTYQCEVVTFTADIGQGEELEP--AREKARQFG-V 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + D L E+ +            + T      +   ++    +  R I         A
Sbjct: 58  KEIYIDDLREEFVRDFVF---PMFRANTVYEGEYLLGTSIARPLIAKRLIEIAQETNADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         +   Y    +  I A     +L
Sbjct: 115 VSHGATGKGNDQVRFELGAYALNPNIKIIAPWREWDL 151


>gi|15887630|ref|NP_353311.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Agrobacterium tumefaciens str. C58]
 gi|21759162|sp|Q8UIL2|GUAA_AGRT5 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|15155177|gb|AAK86096.1| GMP synthase [Agrobacterium tumefaciens str. C58]
          Length = 525

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 55/183 (30%), Gaps = 12/183 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS       +   D++  +  D+G     E E      + +      + 
Sbjct: 224 RVLCALSGGVDSSVAAILIHEAIGDQLTCVYVDHGLMRLGESE------QVVGMFRDHYN 277

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             L       L  LG++S  S   +  +K +        V       +      A +   
Sbjct: 278 IPLVHVDAADL-FLGELSGVS---DPEVKRKTIGRLFIEVFEAEAAKIAADGKGAPKFLA 333

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
              +        S          ++      L    ++ +  PL  L K E   L +++G
Sbjct: 334 QGTLYPDVIESVSFSGGPSVTI-KSHHNVGGLPERMNMQLVEPLRELFKDEVRALGRELG 392

Query: 189 GQD 191
             +
Sbjct: 393 LPE 395


>gi|329957023|ref|ZP_08297591.1| GMP synthase domain protein [Bacteroides clarus YIT 12056]
 gi|328523780|gb|EGF50872.1| GMP synthase domain protein [Bacteroides clarus YIT 12056]
          Length = 517

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 62/188 (32%), Gaps = 21/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS             +  +  D+G   K E    +   + +      
Sbjct: 213 NDRVILGLSGGVDSSVAAVLLHRAIGKNLTCIFVDHGLLRKNEFRNVMRDYECLG----- 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                       L ++G  + +   K++    +        + GR+ I +  A       
Sbjct: 268 ------------LNVIGVDASAKFFKDLEGVTEPEQKRK--IIGRDFIEVFDAEAHKIT- 312

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G    D     +    TI++      L  E ++ +  PL WL K E  ++ ++
Sbjct: 313 DARWLAQGTIYPDRIESLNITGKTIKSHHNVGGLPEEMNLRLCEPLQWLFKDEVRRVGRE 372

Query: 187 IGGQDLVN 194
           +G  + + 
Sbjct: 373 LGMPEHLI 380


>gi|295105730|emb|CBL03273.1| argininosuccinate synthase [Gordonibacter pamelaeae 7-10-1-b]
          Length = 443

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRK 58
          +  +   A+L +SGG D+S C+ W  + +   V  +  D GQ ++   + +    K
Sbjct: 1  MADQKEKAVLAYSGGLDTSCCIKWLQENKGVDVIAVVGDVGQEHEGLEKIKQKALK 56


>gi|167854995|ref|ZP_02477769.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus parasuis 29755]
 gi|219870378|ref|YP_002474753.1| tRNA-specific 2-thiouridylase MnmA [Haemophilus parasuis SH0165]
 gi|167853843|gb|EDS25083.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus parasuis 29755]
 gi|219690582|gb|ACL31805.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus parasuis SH0165]
          Length = 383

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 36/134 (26%), Gaps = 4/134 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 +   SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 21  NAKKKVICGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 77

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     +A            +  + I F  F    A  
Sbjct: 78  AVCDKLG-IKLHKINFAAEYWDNVFEHFLAEYKAGRTPNPDILCNKEIKFKAFLEYAAED 136

Query: 126 LGITNIVIGVCETD 139
           LG   I  G     
Sbjct: 137 LGANFIATGHYVRR 150


>gi|330813890|ref|YP_004358129.1| Glutamine-hydrolyzing GMP synthase [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327486985|gb|AEA81390.1| Glutamine-hydrolyzing GMP synthase [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 281

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 20/53 (37%), Gaps = 1/53 (1%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
               L   SGG DSS           +RV  +  D G   K E +  + + +K
Sbjct: 221 KKKVLCALSGGVDSSVLAHILKKALNNRVYCVYIDTGLMRKNESKEIVSIYRK 273


>gi|221214491|ref|ZP_03587462.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia multivorans CGD1]
 gi|221165748|gb|EED98223.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia multivorans CGD1]
          Length = 381

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 45/192 (23%), Gaps = 11/192 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K    ++  SGG DSS       ++   V  L     + +     C         + +
Sbjct: 1   MSKR-RVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQ-----DWI 54

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                +      +            +      +      PN  V     I        A 
Sbjct: 55  DVVSVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAM 114

Query: 125 RLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            LG   I  G                    T         L          PL  + K +
Sbjct: 115 SLGAETIATGHYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTK 174

Query: 180 TWKLAQDIGGQD 191
             ++A  IG  +
Sbjct: 175 VREIAAQIGLPN 186


>gi|161525855|ref|YP_001580867.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia multivorans ATCC
           17616]
 gi|189349424|ref|YP_001945052.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia multivorans ATCC
           17616]
 gi|205811411|sp|A9AH63|MNMA_BURM1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|160343284|gb|ABX16370.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia multivorans ATCC 17616]
 gi|189333446|dbj|BAG42516.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Burkholderia multivorans ATCC 17616]
          Length = 381

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 45/192 (23%), Gaps = 11/192 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K    ++  SGG DSS       ++   V  L     + +     C         + +
Sbjct: 1   MSKR-RVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQ-----DWI 54

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                +      +            +      +      PN  V     I        A 
Sbjct: 55  DVVSVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAM 114

Query: 125 RLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            LG   I  G                    T         L          PL  + K +
Sbjct: 115 SLGAETIATGHYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTK 174

Query: 180 TWKLAQDIGGQD 191
             ++A  IG  +
Sbjct: 175 VREIAAQIGLPN 186


>gi|325123074|gb|ADY82597.1| conserved hypothetical protein [Acinetobacter calcoaceticus PHEA-2]
          Length = 228

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 44/121 (36%), Gaps = 7/121 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF--DYGQR---NKVELECRLCVRKKIV 61
               +++ FSGG+DSS  L  A+   + +  +    + GQR   + + L+      K I 
Sbjct: 10  NHKRSIVSFSGGKDSSLALYHAMQTGEVIGLIVMLEEQGQRSRSHAMPLDIIQAQAKAIG 69

Query: 62  --ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
              LM     +  E   + L        + +     + + ++   +  V  +  + L   
Sbjct: 70  FPVLMASSSWNDYELKFIELLNQAKQQGAEVLVTGDLDMPEHGCWHDRVTQQVGLQLGMP 129

Query: 120 A 120
            
Sbjct: 130 L 130


>gi|319654551|ref|ZP_08008633.1| bifunctional GMP synthase/glutamine amidotransferase [Bacillus sp.
           2_A_57_CT2]
 gi|317393726|gb|EFV74482.1| bifunctional GMP synthase/glutamine amidotransferase [Bacillus sp.
           2_A_57_CT2]
          Length = 517

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G    +  +    V K   +     
Sbjct: 223 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHG---LLRKDEAEGVMKTFADGFNMN 279

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       +  L  +S     + +                 N    VF    A   G
Sbjct: 280 VIKVDAQERF-MNKLKGVSDPEQKRKI---------------IGNEFIYVFDDEAAKLQG 323

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 324 IDFLAQGTLYTDIIESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGTEL 383

Query: 188 GGQDLV 193
           G  D +
Sbjct: 384 GIPDEI 389


>gi|312135230|ref|YP_004002568.1| gmp synthase, large subunit [Caldicellulosiruptor owensensis OL]
 gi|311775281|gb|ADQ04768.1| GMP synthase, large subunit [Caldicellulosiruptor owensensis OL]
          Length = 511

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 54/187 (28%), Gaps = 23/187 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS             +  +  D+G   K E E  + V K          
Sbjct: 217 KVVCALSGGVDSSVAAVLVHKAIGKNLYCIFVDHGLLRKGEAEEVMNVFK---------- 266

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG- 127
                     +    ++            ++    P          F+      A +LG 
Sbjct: 267 ----------VQFDMNVIKVDAKDRFLNALRGVTDPEEKRKIIGREFIRVFEEEAEKLGD 316

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLAQD 186
           I  +V G    D       +  TI++      L        +  PL  L K E  ++  +
Sbjct: 317 IKFLVQGTIYPDVVESGVGKAATIKSHHNVGGLPENIKFNQIIEPLRELFKDEVRRVGIE 376

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 377 LGIPEKI 383


>gi|310798192|gb|EFQ33085.1| arginosuccinate synthase [Glomerella graminicola M1.001]
          Length = 412

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 35/88 (39%), Gaps = 5/88 (5%)

Query: 7  KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +   + L +SGG D+ST L+W LD+   V     + GQ    E +     +K +     
Sbjct: 1  MSKGTVCLAYSGGLDTSTILAWLLDQGYEVVAYIANVGQ----EEDWAAVEKKALQMGAK 56

Query: 66 KWKDSLGEDHILPLAILGDISHSSLTKN 93
          K      E  ++       +  ++  ++
Sbjct: 57 KMIIDDLEREMVEDLCFKAVRVNAQYED 84


>gi|50304843|ref|XP_452377.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49641510|emb|CAH01228.1| KLLA0C04037p [Kluyveromyces lactis]
          Length = 420

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 5/59 (8%)

Query: 5  IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + K    + L +SGG D+S  L+W L++   V     + GQ  + + E        I  
Sbjct: 1  MSKGK--VCLAYSGGLDTSVILAWLLEQGYEVVAFMANVGQ--EEDFEAAEKKALLIGA 55


>gi|91975193|ref|YP_567852.1| argininosuccinate synthase [Rhodopseudomonas palustris BisB5]
 gi|123735756|sp|Q13D88|ASSY_RHOPS RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|91681649|gb|ABE37951.1| argininosuccinate synthase [Rhodopseudomonas palustris BisB5]
          Length = 445

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 3/72 (4%)

Query: 1  MNDIIKKAPS---ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I+K  P      + FSGG D+S  L W   +  RV   + + GQ ++ + +      
Sbjct: 1  MTTILKSLPKGENVGIAFSGGLDTSAALLWMKQKGARVFAYTANLGQPDEADYDEIPRKA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 MEFGAEKARLVD 72


>gi|297626267|ref|YP_003688030.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296922032|emb|CBL56594.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 357

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 19/181 (10%), Positives = 44/181 (24%), Gaps = 6/181 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +  SGG DS+   +  ++       +    G  +  E      V   +   +  W  
Sbjct: 2   RVAVALSGGVDSAVTAARVVEAGHEAVGVHLLLGAGSVPETRDARGVADAVGIPLVVWDL 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
               +H + L        +  T N  ++          +              A   G  
Sbjct: 62  RDRFEHRV-LDYFTSSYAAGRTPNPCLRCNREVKFRGLLSRGIEEGF-----DAVATGHY 115

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
             +    +     +        ++    +    +    +        K E  + A+  G 
Sbjct: 116 ARLQPARDGSIGLHRAANVRKDQSYVLGVLSQDDLRHCLFPLGTVTTKDEVREEAERRGL 175

Query: 190 Q 190
            
Sbjct: 176 P 176


>gi|255525844|ref|ZP_05392773.1| thiamine biosynthesis protein [Clostridium carboxidivorans P7]
 gi|255510487|gb|EET86798.1| thiamine biosynthesis protein [Clostridium carboxidivorans P7]
          Length = 327

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/132 (11%), Positives = 35/132 (26%), Gaps = 13/132 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL + SGG DS+       D+   V  + F     +    +  + + K+I   +     
Sbjct: 3   KALAMMSGGLDSTLAAKLMKDQGIEVIGICFK---SHFFGADNAIRMAKQINMPLE---- 55

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 ++  +        +        +      +  +   +   L          G  
Sbjct: 56  ------VVDFSEEHFEMVKNPKHGYGKNMNPCIDCHAMMMNYSGKMLEKYEADFIITGEV 109

Query: 130 NIVIGVCETDYS 141
                + +   S
Sbjct: 110 LNQRPMSQNKSS 121


>gi|258563424|ref|XP_002582457.1| argininosuccinate synthase [Uncinocarpus reesii 1704]
 gi|237907964|gb|EEP82365.1| argininosuccinate synthase [Uncinocarpus reesii 1704]
          Length = 91

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 28/77 (36%), Gaps = 3/77 (3%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          +      LL +SGG D+S  L+W +++   V     D GQ    E       +   +   
Sbjct: 1  MANKEKVLLAYSGGLDTSCILAWLIEQGHEVVCFLADVGQ---AEDFKEAEKKALAIGAK 57

Query: 65 PKWKDSLGEDHILPLAI 81
              + L  + +  L  
Sbjct: 58 KLVVEDLKREFVEDLCF 74


>gi|297618698|ref|YP_003706803.1| cell cycle control-like ATPase [Methanococcus voltae A3]
 gi|297377675|gb|ADI35830.1| ATPase of the PP-loop superfamily protein implicated in cell cycle
           control-like protein [Methanococcus voltae A3]
          Length = 367

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 55/196 (28%), Gaps = 12/196 (6%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVE-TLSFDYGQRNKVELECRLCVRKKIV----- 61
              ALL+ SGG+DS+T L+   +    V   + + +     +       + KK       
Sbjct: 59  NKKALLMLSGGKDSATALALCKELNINVVLCIHYVHNWSWDISKNEADNLAKKYDVPIIF 118

Query: 62  -----ELMPKWKDSLGE-DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
                +L  K K + G+    +   I+   +     +N    I   +     + G  +  
Sbjct: 119 PDITEKLSKKIKGAKGKSICRICKDIMKLRAVEYAKENGFDIIITGDTALEKISGPILDD 178

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
           L             + +              R     +    + +     + V       
Sbjct: 179 LREKNPKLEDKDFYHKMELSKIPRRYDTYFLRPLLRLSQNDVMAIHEHYGINVQRVHEVG 238

Query: 176 KKYETWKLAQDIGGQD 191
            K   W+    +   D
Sbjct: 239 DKIGHWREGCCLKYCD 254


>gi|62317722|ref|YP_223575.1| GMP synthase [Brucella abortus bv. 1 str. 9-941]
 gi|83269705|ref|YP_418996.1| GMP synthase [Brucella melitensis biovar Abortus 2308]
 gi|163844537|ref|YP_001622192.1| GMP synthase [Brucella suis ATCC 23445]
 gi|189022977|ref|YP_001932718.1| GMP synthase [Brucella abortus S19]
 gi|225628806|ref|ZP_03786840.1| GMP synthase, C-terminal domain-containing protein [Brucella ceti
           str. Cudo]
 gi|237817265|ref|ZP_04596257.1| GMP synthase, C-terminal domain-containing protein [Brucella
           abortus str. 2308 A]
 gi|254691225|ref|ZP_05154479.1| GMP synthase [Brucella abortus bv. 6 str. 870]
 gi|254695471|ref|ZP_05157299.1| GMP synthase [Brucella abortus bv. 3 str. Tulya]
 gi|254699012|ref|ZP_05160840.1| GMP synthase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254699635|ref|ZP_05161463.1| GMP synthase [Brucella suis bv. 5 str. 513]
 gi|254706107|ref|ZP_05167935.1| GMP synthase [Brucella pinnipedialis M163/99/10]
 gi|254711593|ref|ZP_05173404.1| GMP synthase [Brucella pinnipedialis B2/94]
 gi|254712190|ref|ZP_05174001.1| GMP synthase [Brucella ceti M644/93/1]
 gi|254715260|ref|ZP_05177071.1| GMP synthase [Brucella ceti M13/05/1]
 gi|254720561|ref|ZP_05182372.1| GMP synthase [Brucella sp. 83/13]
 gi|254732459|ref|ZP_05191037.1| GMP synthase [Brucella abortus bv. 4 str. 292]
 gi|256015143|ref|YP_003105152.1| GMP synthase [Brucella microti CCM 4915]
 gi|256029771|ref|ZP_05443385.1| GMP synthase [Brucella pinnipedialis M292/94/1]
 gi|256059419|ref|ZP_05449621.1| GMP synthase [Brucella neotomae 5K33]
 gi|256157944|ref|ZP_05455862.1| GMP synthase [Brucella ceti M490/95/1]
 gi|256253097|ref|ZP_05458633.1| GMP synthase [Brucella ceti B1/94]
 gi|256256412|ref|ZP_05461948.1| GMP synthase [Brucella abortus bv. 9 str. C68]
 gi|260167121|ref|ZP_05753932.1| GMP synthase [Brucella sp. F5/99]
 gi|260544963|ref|ZP_05820784.1| GuaA protein [Brucella abortus NCTC 8038]
 gi|260756828|ref|ZP_05869176.1| GMP synthetase [Brucella abortus bv. 6 str. 870]
 gi|260760259|ref|ZP_05872607.1| GMP synthetase [Brucella abortus bv. 4 str. 292]
 gi|260763498|ref|ZP_05875830.1| GMP synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260882644|ref|ZP_05894258.1| GMP synthase [Brucella abortus bv. 9 str. C68]
 gi|261215857|ref|ZP_05930138.1| GMP synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|261216986|ref|ZP_05931267.1| GMP synthase [Brucella ceti M13/05/1]
 gi|261220200|ref|ZP_05934481.1| GMP synthase [Brucella ceti B1/94]
 gi|261313545|ref|ZP_05952742.1| GMP synthase [Brucella pinnipedialis M163/99/10]
 gi|261319216|ref|ZP_05958413.1| GMP synthase [Brucella pinnipedialis B2/94]
 gi|261319856|ref|ZP_05959053.1| GMP synthase [Brucella ceti M644/93/1]
 gi|261323385|ref|ZP_05962582.1| GMP synthase [Brucella neotomae 5K33]
 gi|261750099|ref|ZP_05993808.1| GMP synthase [Brucella suis bv. 5 str. 513]
 gi|261756521|ref|ZP_06000230.1| bifunctional GMP synthase/glutamine amidotransferase [Brucella sp.
           F5/99]
 gi|265985594|ref|ZP_06098329.1| GMP synthase [Brucella sp. 83/13]
 gi|265986783|ref|ZP_06099340.1| GMP synthase [Brucella pinnipedialis M292/94/1]
 gi|265996453|ref|ZP_06109010.1| GMP synthase [Brucella ceti M490/95/1]
 gi|294853356|ref|ZP_06794028.1| GMP synthase [Brucella sp. NVSL 07-0026]
 gi|297249772|ref|ZP_06933473.1| guaA, GMP synthase [Brucella abortus bv. 5 str. B3196]
 gi|306838072|ref|ZP_07470929.1| GMP synthase [Brucella sp. NF 2653]
 gi|306845655|ref|ZP_07478224.1| GMP synthase [Brucella sp. BO1]
 gi|75495459|sp|Q577H0|GUAA_BRUAB RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|91206796|sp|Q2YK38|GUAA_BRUA2 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226738393|sp|B2SBN5|GUAA_BRUA1 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226738396|sp|A9WY54|GUAA_BRUSI RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|62197915|gb|AAX76214.1| GuaA, GMP synthase [Brucella abortus bv. 1 str. 9-941]
 gi|82939979|emb|CAJ13008.1| Glutamine amidotransferase class-I:Carbamoyl-phosphate synthase,
           GATase domain:GMP synthase, C terminal:GMP synthase,
           N-termi [Brucella melitensis biovar Abortus 2308]
 gi|163675260|gb|ABY39370.1| GMP synthase, C-terminal domain [Brucella suis ATCC 23445]
 gi|189021551|gb|ACD74272.1| GuaA, GMP synthase [Brucella abortus S19]
 gi|225616652|gb|EEH13700.1| GMP synthase, C-terminal domain-containing protein [Brucella ceti
           str. Cudo]
 gi|237788078|gb|EEP62294.1| GMP synthase, C-terminal domain-containing protein [Brucella
           abortus str. 2308 A]
 gi|255997803|gb|ACU49490.1| GMP synthase [Brucella microti CCM 4915]
 gi|260098234|gb|EEW82108.1| GuaA protein [Brucella abortus NCTC 8038]
 gi|260670577|gb|EEX57517.1| GMP synthetase [Brucella abortus bv. 4 str. 292]
 gi|260673919|gb|EEX60740.1| GMP synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260676936|gb|EEX63757.1| GMP synthetase [Brucella abortus bv. 6 str. 870]
 gi|260872172|gb|EEX79241.1| GMP synthase [Brucella abortus bv. 9 str. C68]
 gi|260917464|gb|EEX84325.1| GMP synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|260918784|gb|EEX85437.1| GMP synthase [Brucella ceti B1/94]
 gi|260922075|gb|EEX88643.1| GMP synthase [Brucella ceti M13/05/1]
 gi|261292546|gb|EEX96042.1| GMP synthase [Brucella ceti M644/93/1]
 gi|261298439|gb|EEY01936.1| GMP synthase [Brucella pinnipedialis B2/94]
 gi|261299365|gb|EEY02862.1| GMP synthase [Brucella neotomae 5K33]
 gi|261302571|gb|EEY06068.1| GMP synthase [Brucella pinnipedialis M163/99/10]
 gi|261736505|gb|EEY24501.1| bifunctional GMP synthase/glutamine amidotransferase [Brucella sp.
           F5/99]
 gi|261739852|gb|EEY27778.1| GMP synthase [Brucella suis bv. 5 str. 513]
 gi|262550750|gb|EEZ06911.1| GMP synthase [Brucella ceti M490/95/1]
 gi|264658980|gb|EEZ29241.1| GMP synthase [Brucella pinnipedialis M292/94/1]
 gi|264664186|gb|EEZ34447.1| GMP synthase [Brucella sp. 83/13]
 gi|294819011|gb|EFG36011.1| GMP synthase [Brucella sp. NVSL 07-0026]
 gi|297173641|gb|EFH33005.1| guaA, GMP synthase [Brucella abortus bv. 5 str. B3196]
 gi|306273976|gb|EFM55803.1| GMP synthase [Brucella sp. BO1]
 gi|306406809|gb|EFM63031.1| GMP synthase [Brucella sp. NF 2653]
          Length = 520

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 59/185 (31%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DSS     A +   D++  +  D+G   K E        +++VE+   
Sbjct: 222 SGKVICALSGGVDSSVAALLAHEAVGDQLTCILVDHGLMRKDE-------AQQVVEMFR- 273

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 E + LPL ++                +        +              A  L
Sbjct: 274 ------EHYNLPLILVDASDRFIGALEGESDPEKKRKTIGRLFIEVFEEEARKLGGADFL 327

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+    +      TI++      L     + +  PL  L K E   L ++
Sbjct: 328 VQGTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMKMQLVEPLRELFKDEVRLLGKE 385

Query: 187 IGGQD 191
           +G  D
Sbjct: 386 LGLPD 390


>gi|23500114|ref|NP_699554.1| GMP synthase [Brucella suis 1330]
 gi|161620433|ref|YP_001594319.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Brucella canis ATCC 23365]
 gi|254702758|ref|ZP_05164586.1| GMP synthase [Brucella suis bv. 3 str. 686]
 gi|260568335|ref|ZP_05838804.1| GMP synthase [Brucella suis bv. 4 str. 40]
 gi|261753353|ref|ZP_05997062.1| GMP synthase [Brucella suis bv. 3 str. 686]
 gi|38257625|sp|Q8FWT4|GUAA_BRUSU RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226738394|sp|A9MEB0|GUAA_BRUC2 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|23463708|gb|AAN33559.1| GMP synthase [Brucella suis 1330]
 gi|161337244|gb|ABX63548.1| GMP synthase, C-terminal domain [Brucella canis ATCC 23365]
 gi|260155000|gb|EEW90081.1| GMP synthase [Brucella suis bv. 4 str. 40]
 gi|261743106|gb|EEY31032.1| GMP synthase [Brucella suis bv. 3 str. 686]
          Length = 520

 Score = 48.8 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 59/185 (31%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DSS     A +   D++  +  D+G   K E        +++VE+   
Sbjct: 222 SGKVICALSGGVDSSVAALLAHEAVGDQLTCILVDHGLMRKDE-------AQQVVEMFR- 273

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 E + LPL ++                +        +              A  L
Sbjct: 274 ------EHYNLPLILVDASDRFIGALEGESDPEKKRKTIGRLFIEVFEEEARKLGGADFL 327

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+    +      TI++      L     + +  PL  L K E   L ++
Sbjct: 328 VQGTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMKMQLVEPLRELFKDEVRLLGKE 385

Query: 187 IGGQD 191
           +G  D
Sbjct: 386 LGLPD 390


>gi|323465786|gb|ADX69473.1| Bifunctional GMP synthase/glutamine amidotransferase protein
           [Lactobacillus helveticus H10]
          Length = 525

 Score = 48.4 bits (113), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 61/204 (29%), Gaps = 30/204 (14%)

Query: 1   MNDIIKKA----------PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVE 49
           MND I                +L  SGG DSS   +       D++  +  D+G   K E
Sbjct: 213 MNDFIDMKVDDIRKEVGDKKVILGLSGGVDSSVTATLLHKAIGDQLTAIFVDHGMLRKDE 272

Query: 50  LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
            +    V + + + +      +       L  L  ++     + +  K            
Sbjct: 273 GD---QVMQALNKDLGVNIIRVNAQKRF-LDKLKGVTDPEQKRKIIGKEFIEVFNEEAKK 328

Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
            +++ FL         +                       TI++      L  + H  + 
Sbjct: 329 LKDVNFLAQGTLYTDVIE---------------SGTNTAQTIKSHHNVGGLPKDMHFKLI 373

Query: 170 TPLMWLKKYETWKLAQDIGGQDLV 193
            PL  L K E  +L + +G    +
Sbjct: 374 EPLRKLFKDEVRELGERLGIPHDL 397


>gi|300932931|ref|ZP_07148187.1| GMP synthase [Corynebacterium resistens DSM 45100]
          Length = 530

 Score = 48.4 bits (113), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 60/193 (31%), Gaps = 12/193 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
            + +     A+   SGG DS+   +       DR+  +  D+G   + E E         
Sbjct: 220 REQVGPEGRAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRQGEREQVEK----- 274

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            + +      L   H    A L  ++  +  +     I    + +       ++      
Sbjct: 275 -DFVAATGAKLVTAHEKD-AFLKKLAGVTEPEAKRKAIGAEFIRSFERAVTEVLESAPEG 332

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           +    L    +   V E+            I++      L  +    +  PL  L K E 
Sbjct: 333 STVDYLVQGTLYPDVVESGGGSGT----ANIKSHHNVGGLPDDVEFELVEPLRLLFKDEV 388

Query: 181 WKLAQDIGGQDLV 193
             + +++G  + +
Sbjct: 389 RAVGRELGLPEEI 401


>gi|209883451|ref|YP_002287308.1| argininosuccinate synthase [Oligotropha carboxidovorans OM5]
 gi|226729196|sp|B6JAT0|ASSY_OLICO RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|209871647|gb|ACI91443.1| argininosuccinate synthase [Oligotropha carboxidovorans OM5]
          Length = 445

 Score = 48.4 bits (113), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 3/72 (4%)

Query: 1  MNDIIKKAPS---ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M+ I+K  P      + FSGG D+S  L W   +  RV   + + GQ ++ + +      
Sbjct: 1  MSTILKSLPKGENVGIAFSGGLDTSAALLWMKQKGARVFAYTANLGQPDEADYDEIPRKA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 LEFGAEKARLVD 72


>gi|161506835|ref|YP_001576789.1| GMP synthase [Lactobacillus helveticus DPC 4571]
 gi|160347824|gb|ABX26498.1| GMP synthase [Lactobacillus helveticus DPC 4571]
          Length = 494

 Score = 48.4 bits (113), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 61/204 (29%), Gaps = 30/204 (14%)

Query: 1   MNDIIKKA----------PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVE 49
           MND I                +L  SGG DSS   +       D++  +  D+G   K E
Sbjct: 182 MNDFIDMKVDDIRKEVGDKKVILGLSGGVDSSVTATLLHKAIGDQLTAIFVDHGMLRKDE 241

Query: 50  LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
            +    V + + + +      +       L  L  ++     + +  K            
Sbjct: 242 GD---QVMQALNKDLGVNIIRVNAQKRF-LDKLKGVTDPEQKRKIIGKEFIEVFNEEAKK 297

Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
            +++ FL         +                       TI++      L  + H  + 
Sbjct: 298 LKDVNFLAQGTLYTDVIE---------------SGTNTAQTIKSHHNVGGLPKDMHFKLI 342

Query: 170 TPLMWLKKYETWKLAQDIGGQDLV 193
            PL  L K E  +L + +G    +
Sbjct: 343 EPLRKLFKDEVRELGERLGIPHDL 366


>gi|86157907|ref|YP_464692.1| tRNA-specific 2-thiouridylase MnmA [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|123497474|sp|Q2IHX6|MNMA_ANADE RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|85774418|gb|ABC81255.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 351

 Score = 48.4 bits (113), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/119 (13%), Positives = 31/119 (26%), Gaps = 3/119 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DSST  +        V  ++      +        C    + +     + 
Sbjct: 2   RILVAMSGGVDSSTAAALLAGEGHEVIGVTMRVADYSDAARGRSCCAPDDVEDARAAARR 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                ++  +          +         +   PN  V     +   +    A  LG 
Sbjct: 62  LGIPFYVANV---EARFRERVIDRFVDDYVEGRTPNPCVACNTEVKFDWLLARARALGA 117


>gi|251783539|ref|YP_002997844.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
 gi|242392171|dbj|BAH82630.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus dysgalactiae subsp. equisimilis GGS_124]
          Length = 379

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 48/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 7   MTD--NSNTRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDY 62

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 63  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 119

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A  LG   +  G             H    A            L  +       PL  
Sbjct: 120 DYAMTLGADYVATGHYAQVKRDEDGTVHMLRGADNGKDQTYFLSQLSQKQLQKTLFPLGH 179

Query: 175 LKKYETWKLAQDIG 188
           L+K E  ++A+  G
Sbjct: 180 LQKPEVRQIAERAG 193


>gi|237739900|ref|ZP_04570381.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium sp. 2_1_31]
 gi|229423508|gb|EEO38555.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium sp. 2_1_31]
          Length = 362

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 54/192 (28%), Gaps = 17/192 (8%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           KK     +  SGG DSST       +   +  ++       K E      V   +     
Sbjct: 21  KKGIKVGVAMSGGVDSSTVAYLLKQQGYDIFGVTMKTF---KDEDSDAKKVCDDLG---- 73

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  E ++L +    +     +   V   +         V  R  I           
Sbjct: 74  ------IEHYVLDVRD--EFKEKVMDYFVNEYMNGRTPNPCMVCNR-HIKFGKMLDFILS 124

Query: 126 LGITNIVIGVCETDYSGYPDCRHD-TIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            G + +  G      +G      D     +     +  +    +  P+  L+K +  +LA
Sbjct: 125 KGASFMATGHYTKLKNGLLSVGDDSNKDQVYFLSQIQKDRLSKIIFPVGDLEKPKLRELA 184

Query: 185 QDIGGQDLVNLI 196
           + IG +      
Sbjct: 185 KQIGVRVYSKKD 196


>gi|149532439|ref|XP_001516069.1| PREDICTED: similar to Argininosuccinate synthase
          (Citrulline--aspartate ligase), partial
          [Ornithorhynchus anatinus]
          Length = 123

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 33/89 (37%), Gaps = 2/89 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          +    + +L +SGG D+S  L W  ++   +     + GQR K   E        +  L 
Sbjct: 1  MSGKGTVVLAYSGGLDTSCILVWLKEQGYDIIAYLREEGQRAKNPEE--EEAAHPLGLLP 58

Query: 65 PKWKDSLGEDHILPLAILGDISHSSLTKN 93
           +          +   I   +  S+L ++
Sbjct: 59 TQVFIEDVSKEFVEEFIWPAVQSSALYED 87


>gi|254253215|ref|ZP_04946533.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia dolosa AUO158]
 gi|124895824|gb|EAY69704.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia dolosa AUO158]
          Length = 382

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 45/192 (23%), Gaps = 11/192 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K    ++  SGG DSS       ++   V  L     + +     C         + +
Sbjct: 1   MSKR-RVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQ-----DWI 54

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                +      +            +      +      PN  V     I        A 
Sbjct: 55  DVVSVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAM 114

Query: 125 RLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            LG   I  G                    T         L          PL  + K +
Sbjct: 115 SLGAETIATGHYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTK 174

Query: 180 TWKLAQDIGGQD 191
             ++A  IG  +
Sbjct: 175 VREIAAQIGLPN 186


>gi|24638305|sp|Q8NZ00|MNMA_STRP8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 373

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 50/192 (26%), Gaps = 12/192 (6%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +   +    ++  SGG DSS       ++   V  +             C     +   +
Sbjct: 1   MTDNSKIRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDYKD 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +           + +            + +    + +    PN  V     I        
Sbjct: 59  VAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLGY 115

Query: 123 AYRLGITNIVIGVCET----DYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLK 176
           A  LG   +  G        +       R       +T     L  E       PL  L+
Sbjct: 116 AMTLGADYVATGHYAQVKRDENGTVHMLRGADNGKDQTYFLSQLSQEQLQKTLFPLGHLQ 175

Query: 177 KYETWKLAQDIG 188
           K E  ++A+  G
Sbjct: 176 KSEVREIAERAG 187


>gi|88803328|ref|ZP_01118854.1| putative argininosuccinate synthase [Polaribacter irgensii 23-P]
 gi|88780894|gb|EAR12073.1| putative argininosuccinate synthase [Polaribacter irgensii 23-P]
          Length = 393

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 51/178 (28%), Gaps = 12/178 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++ +SGG D+S C          V  +S + G  ++ E++       K+     K  
Sbjct: 2   KKLVIAYSGGLDTSYCAVSLSKE-YEVHAVSVNTGGFSEDEIKHIESNAYKMGVTNYKNI 60

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D++   +   +  L           +   +  NN     V    II  +     A  +G 
Sbjct: 61  DAVATFYQKVVKYL-----------IFGNVLKNNSYPLSVSAERIIQAIEIVEYAKSIGA 109

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
             I  G                  A    I   +          +   K E   ++ +
Sbjct: 110 AYIAHGSTGAGNDQVRFDMIFQTLAPNITIITPIRDQQLTRKEEIDYLKSEGINMSWE 167


>gi|291277423|ref|YP_003517195.1| GMP synthase [Helicobacter mustelae 12198]
 gi|290964617|emb|CBG40471.1| GMP synthase (glutamine-hydrolyzing) [Helicobacter mustelae 12198]
          Length = 521

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 46/195 (23%), Gaps = 17/195 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K    L   SGG DSS   +         +  +  D G   K E E    + K       
Sbjct: 220 KDGKVLCAVSGGVDSSVVATLLYRAIGGDLIPVFVDTGLLRKGEREAVQSMFK------- 272

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                      +  + +       ++     +                            
Sbjct: 273 --DHLKVPLITVDASEIFLSRLRGVSDPEKKRKIIGETFIEVFEKEAKKHNANGEIKFLA 330

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G         +   S        TI++      L       +  PL  L K E   L +
Sbjct: 331 QG-----TLYPDVIESVSVKGPSKTIKSHHNVGGLPDWMQFELIEPLRELFKDEVRALGR 385

Query: 186 DIGGQD--LVNLILE 198
           ++G  +  L+     
Sbjct: 386 ELGMPESMLLRHPFP 400


>gi|270156742|ref|ZP_06185399.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Legionella longbeachae D-4968]
 gi|289164811|ref|YP_003454949.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Legionella longbeachae NSW150]
 gi|269988767|gb|EEZ95021.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Legionella longbeachae D-4968]
 gi|288857984|emb|CBJ11844.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Legionella longbeachae NSW150]
          Length = 361

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 50/189 (26%), Gaps = 14/189 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS       +   +VE L     +++  +  C              
Sbjct: 1   MKAKVIIGMSGGVDSSVAAWLLQETGYQVEGLFMKNWEQDDKDGFCPAA-------QDLA 53

Query: 67  WKDSLGEDHILPL--AILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              ++     +PL           ++      + +    PN  V     I        A 
Sbjct: 54  DAQAVCNQLRIPLHTTNFSKEYWQNVFTYFLSEYEKGRTPNPDVLCNKEIKFKAFLDHAL 113

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV-----HTPLMWLKKYE 179
            LG   I  G    +            +  +      + +           P+    K E
Sbjct: 114 TLGADYIATGHYAKNVIDGDTGFLFKAKDRDKDQTYFLHAVDPKALGKTLFPIGDYTKTE 173

Query: 180 TWKLAQDIG 188
             + AQ +G
Sbjct: 174 IREFAQKLG 182


>gi|289450871|ref|YP_003475359.1| GMP synthase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289185418|gb|ADC91843.1| GMP synthase (glutamine-hydrolyzing) [Clostridiales genomosp. BVAB3
           str. UPII9-5]
          Length = 525

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 62/205 (30%), Gaps = 31/205 (15%)

Query: 1   MND----IIKK------APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVE 49
           MND    ++KK      +   +  FSGG DS+           + +  +  D+G     E
Sbjct: 212 MNDFAGAMVKKLCEAIGSAKVICAFSGGVDSAVAALLVHKAIGNNLTCIFVDHGLLRLGE 271

Query: 50  LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
            E  + V  K         +       +          ++L      + +   +   F+ 
Sbjct: 272 SEQVMEVFGK---------NYNMNIRRID---AKQQFLTALQGVADPEKKRKIIGAEFIK 319

Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-V 168
               I             +  +V G    D       +   I++      L  + +   +
Sbjct: 320 VFERIAD-------EYHNVDYLVQGTIYPDVIESGTDKAAVIKSHHNVGGLPDKINFKAI 372

Query: 169 HTPLMWLKKYETWKLAQDIGGQDLV 193
             PL  L K E  K+   +G  + +
Sbjct: 373 IEPLRNLFKDEVRKVGMTLGMPEEL 397


>gi|254669809|emb|CBA04142.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria meningitidis alpha153]
          Length = 367

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 43/180 (23%), Gaps = 10/180 (5%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++  SGG DSS   +    +  +V  +     + +  +  C +       +       + 
Sbjct: 11  IVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWEDDDNDEYCSIKQ-----DSFDAIAVAD 65

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
                + +          +      +      PN  V     I        A   G   I
Sbjct: 66  IVGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLCNAEIKFKCFLDYAVGQGADTI 125

Query: 132 VIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
             G                              L          PL  L+K E  +LA +
Sbjct: 126 ATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLKPFQLERAIFPLGGLEKPEVRRLAAE 185


>gi|221633168|ref|YP_002522393.1| GMP synthase [Thermomicrobium roseum DSM 5159]
 gi|254800123|sp|B9L0W3|GUAA_THERP RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|221156021|gb|ACM05148.1| GMP synthase (glutamine-hydrolyzing) [Thermomicrobium roseum DSM
           5159]
          Length = 527

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 49/187 (26%), Gaps = 16/187 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS   +       D++  +  D G   + E E    V          
Sbjct: 228 KDRVLLALSGGVDSSVAAALIHRAIGDQLTPVFVDTGLLREGEAETIREV---------- 277

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G    +PL  +       +        +           R    +  +      L
Sbjct: 278 ----FGRHFRMPLVAIDARQRFLVRLRGVSDPEQKRRLIGEEFVRVFEEIARSQGPFRFL 333

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                +        +         I+       L  +    +  PL +L K E   + + 
Sbjct: 334 -AQGTLYPDVIESAAPGASRTAAKIKTHHNVGGLPQDLEFELLEPLRYLFKDEVRAIGRL 392

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 393 LGLPEEI 399


>gi|325295219|ref|YP_004281733.1| Argininosuccinate synthase [Desulfurobacterium thermolithotrophum
          DSM 11699]
 gi|325065667|gb|ADY73674.1| Argininosuccinate synthase [Desulfurobacterium thermolithotrophum
          DSM 11699]
          Length = 402

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 2/63 (3%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L +SGG D+S  + W  DR   V T + D GQ  ++         KK   +   
Sbjct: 1  MGKRVVLAYSGGLDTSVIVRWLADRGFEVITYTADVGQGEELGEI--EEKAKKAGAVEAI 58

Query: 67 WKD 69
            D
Sbjct: 59 IDD 61


>gi|322412887|gb|EFY03795.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus dysgalactiae
           subsp. dysgalactiae ATCC 27957]
          Length = 373

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 48/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MTD--NSNTRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A  LG   +  G             H    A            L  +       PL  
Sbjct: 114 DYAMTLGADYVATGHYAQVKRDEDGVVHMLRGADNGKDQTYFLSQLSQKQLQKTLFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  ++A+  G
Sbjct: 174 LQKPEVRQIAERAG 187


>gi|308389283|gb|ADO31603.1| tRNA(Ile)-lysidine synthetase [Neisseria meningitidis alpha710]
          Length = 436

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/196 (11%), Positives = 45/196 (22%), Gaps = 31/196 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELM 64
               +  SGG DS   L   +    +     + L   +G                     
Sbjct: 22  KKTAVALSGGLDSVVLLHLLVRAGKKGGFIPDALHIHHG-----LSPRADDWADFCQNYC 76

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L    +        I  ++  K  A   +           R+     F   +A 
Sbjct: 77  DMLGVGLETVKVCVEKNGLGIEAAARQKRYAAFAEKGFDVLALAHHRDDQIETFMLAVAR 136

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G+  +        +                           +  PL+   + + W  A
Sbjct: 137 GGGLRALAAMPAVRPFGEKGI----------------------IWRPLLPFSRQDIWDYA 174

Query: 185 QDIGGQDLVNLILEES 200
           Q  G  ++ +    ++
Sbjct: 175 QKHGLPNIEDESNTDT 190


>gi|289577867|ref|YP_003476494.1| NAD+ synthetase [Thermoanaerobacter italicus Ab9]
 gi|289527580|gb|ADD01932.1| NAD+ synthetase [Thermoanaerobacter italicus Ab9]
          Length = 543

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 15/165 (9%), Positives = 41/165 (24%), Gaps = 2/165 (1%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             A++  SGG DS+   + A++    + V  +S      ++        +   +      
Sbjct: 288 KKAVVGLSGGIDSAVVCAIAVEALGKENVFAVSMPSRYSSEGSKSDARILADNLGIEFRV 347

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                  +  L +    + +   L +         N           I L         +
Sbjct: 348 IPIEPVFESYLSVFNGDNSAIGDLAEENIQARIRGNYLMFISNREGHIVLTTGNKSELAM 407

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
           G   +   +  +        +       +          +++   
Sbjct: 408 GYCTLYGDMSGSLAPIADVPKTMVYELAKYINRKKEIIPISIIEK 452


>gi|55958409|emb|CAI16159.1| argininosuccinate synthetase 1 [Homo sapiens]
          Length = 179

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 21/48 (43%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
          +    S +L +SGG D+S  L W  ++   V     + GQ+   E   
Sbjct: 1  MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48


>gi|124005943|ref|ZP_01690781.1| argininosuccinate synthase [Microscilla marina ATCC 23134]
 gi|123988626|gb|EAY28267.1| argininosuccinate synthase [Microscilla marina ATCC 23134]
          Length = 405

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 3/70 (4%)

Query: 1  MNDIIKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
          M D        +L FSGG D S      A ++   V  ++ + G  +  EL+      ++
Sbjct: 1  MTDT--SNNKVVLAFSGGLDTSYCAQYLAQEKGMEVYAVAVNTGGFSDEELKQIAQRAEQ 58

Query: 60 IVELMPKWKD 69
          +  +  K  D
Sbjct: 59 LNVVDFKVLD 68


>gi|192065|gb|AAB60706.1| argininosuccinate synthetase [Mus musculus]
          Length = 199

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 21/48 (43%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
          +    S +L +SGG D+S  L W  ++   V     + GQ+   E   
Sbjct: 1  MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48


>gi|169350791|ref|ZP_02867729.1| hypothetical protein CLOSPI_01564 [Clostridium spiroforme DSM
          1552]
 gi|169292499|gb|EDS74632.1| hypothetical protein CLOSPI_01564 [Clostridium spiroforme DSM
          1552]
          Length = 44

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 16/38 (42%)

Query: 2  NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
          +++ + +   +L  SGG DS+        +  +    +
Sbjct: 6  SEVTRMSKRVVLGLSGGVDSAVAAYLLKKQGSQAAATT 43


>gi|133930601|gb|ABO43871.1| ThiI [Lactobacillus reuteri]
          Length = 311

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/130 (10%), Positives = 30/130 (23%), Gaps = 16/130 (12%)

Query: 19  QDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILP 78
            DS       + R   +E + F                  K  +L  +     G    + 
Sbjct: 189 IDSPVAAYLGMKRGVSMEMVHFF------SPPYTSPQALAKAKQLTERLAKYSGSIKFIQ 242

Query: 79  LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCET 138
           +              +   +++       +  +  + L  AA L  +     I  G    
Sbjct: 243 VPFA----------EIQETVKEKVPEGYLMTIQRRMMLRLAAALMIKRHGLAIFNGESLG 292

Query: 139 DYSGYPDCRH 148
             +       
Sbjct: 293 QVASQTMESM 302


>gi|329963139|ref|ZP_08300919.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides fluxus YIT 12057]
 gi|328529180|gb|EGF56110.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides fluxus YIT 12057]
          Length = 359

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 13/121 (10%), Positives = 31/121 (25%), Gaps = 10/121 (8%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + K     L+  SGG DS+       ++   +  L+        V+      + + +   
Sbjct: 1   MNKSEKRVLVGMSGGIDSTATCLMLKEQGYEIVGLTMWVWGDKPVD---ACELAESMGIG 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                +      I+    + +                  + N     R ++         
Sbjct: 58  HYIADERDAFRRIIVQDFIDEYRQGRTPNP-------CVMCNPMFKFRILMEWADKLGCK 110

Query: 124 Y 124
           Y
Sbjct: 111 Y 111


>gi|259487237|tpe|CBF85751.1| TPA: arginosuccinate synthetase (Eurofung) [Aspergillus nidulans
          FGSC A4]
          Length = 416

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 26/65 (40%), Gaps = 3/65 (4%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          + K    +  FSGG D+S  L W +D    V   + D GQ  + +         K+  + 
Sbjct: 1  MGKGKICVA-FSGGLDTSVILKWLIDEGYEVVAFTADVGQ--EEDFAAIKEKALKLGAVK 57

Query: 65 PKWKD 69
           +  D
Sbjct: 58 AEVVD 62


>gi|227889771|ref|ZP_04007576.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus johnsonii ATCC 33200]
 gi|227849635|gb|EEJ59721.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus johnsonii ATCC 33200]
          Length = 383

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 49/193 (25%), Gaps = 12/193 (6%)

Query: 3   DIIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
            ++  +    ++  SGG DSS        +   V  +             C     +   
Sbjct: 8   KMVDNSKIRVVVGMSGGVDSSVSALLLKQQGFDVVGVFMKNWDDTDDSGVC--TATEDYE 65

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           ++     +     + +            + +    + +    PN  V     I       
Sbjct: 66  DVKKVADEIGIPYYSIN---FEKDYWDRVFEYFLDEYKKGRTPNPDVMCNKEIKFKSFLD 122

Query: 122 LAYRLGITNIVIGVCETDY----SGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWL 175
            A  L    I +G                R       +T     L  +    V  PL  L
Sbjct: 123 FAMDLDADYIAMGHYAATRVDDNGVVHMMRPKDGNKDQTYFLNQLSQDQLKKVIFPLANL 182

Query: 176 KKYETWKLAQDIG 188
            K +  ++A   G
Sbjct: 183 TKPQVREIAIASG 195


>gi|15669318|ref|NP_248123.1| GMP synthase subunit B [Methanocaldococcus jannaschii DSM 2661]
 gi|13626885|sp|Q58531|GUAAB_METJA RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
           AltName: Full=GMP synthetase
 gi|1592321|gb|AAB99133.1| GMP synthase (guaA) [Methanocaldococcus jannaschii DSM 2661]
          Length = 310

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 60/185 (32%), Gaps = 26/185 (14%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A++  SGG DSS           D++  +  D G   K E E          E+   ++
Sbjct: 23  KAIIALSGGVDSSVAAVLTHKAIGDKLTAVFVDTGLMRKGERE----------EVEKTFR 72

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D LG + I+  A    ++      +   K +              +F+     +A  +  
Sbjct: 73  DKLGLNLIVVDAKDRFLNALKGVTDPEEKRK----------IIGKLFIDVFEEIAEDIKA 122

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G                       + L     + V  PL  L K E   LA+++G
Sbjct: 123 EVLVQGTIA-----PDWIETQGKIKSHHNVALPHGMVLEVVEPLRELYKDEVRLLAKELG 177

Query: 189 GQDLV 193
             D +
Sbjct: 178 LPDSI 182


>gi|119357892|ref|YP_912536.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chlorobium phaeobacteroides DSM 266]
 gi|205813544|sp|A1BI85|MNMA_CHLPD RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|119355241|gb|ABL66112.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chlorobium phaeobacteroides DSM 266]
          Length = 357

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 43/187 (22%), Gaps = 13/187 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              + ++  SGG DS+      + +  RV  L+                    +      
Sbjct: 1   MTETVVVGISGGVDSAVAACLLMKQGYRVLGLNIRILDTPDEHPS--------LAPSPLL 52

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D       +    L       + +           PN  +     I        A  L
Sbjct: 53  ISDHADYQFPVFSLNLSARFSQEVIRYFQADYLAGKTPNPCMVCNKKIKWHGLLEGARLL 112

Query: 127 GITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           G   I  G      S     R                 L          PL  L K +  
Sbjct: 113 GAERIATGHYARTASLDGRVRLYKGLDPQKDQSYFLWMLSQNDLNKTCFPLGELAKEKVR 172

Query: 182 KLAQDIG 188
           +LA+  G
Sbjct: 173 ELARTFG 179


>gi|67522853|ref|XP_659487.1| hypothetical protein AN1883.2 [Aspergillus nidulans FGSC A4]
 gi|40745892|gb|EAA65048.1| hypothetical protein AN1883.2 [Aspergillus nidulans FGSC A4]
          Length = 468

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 26/65 (40%), Gaps = 3/65 (4%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          + K    +  FSGG D+S  L W +D    V   + D GQ  + +         K+  + 
Sbjct: 1  MGKGKICVA-FSGGLDTSVILKWLIDEGYEVVAFTADVGQ--EEDFAAIKEKALKLGAVK 57

Query: 65 PKWKD 69
           +  D
Sbjct: 58 AEVVD 62


>gi|224437009|ref|ZP_03657990.1| argininosuccinate synthase [Helicobacter cinaedi CCUG 18818]
 gi|313143482|ref|ZP_07805675.1| argininosuccinate synthase [Helicobacter cinaedi CCUG 18818]
 gi|313128513|gb|EFR46130.1| argininosuccinate synthase [Helicobacter cinaedi CCUG 18818]
          Length = 401

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 46/169 (27%), Gaps = 5/169 (2%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L +SGG D+S  L W  D +   V T + D GQ  +VE      +  K+       
Sbjct: 4   KKVVLAYSGGLDTSVILKWLGDNYNCEVVTFTADIGQGEEVEPARAKAL--KLGIKSENI 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                 +  +           + T      +   ++    +  R +         A   G
Sbjct: 62  FIEDLREEFIK--DFVFPMFRANTIYEGEYLLGTSIARPLIAKRLVEIAKAVGADAVAHG 119

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
            T         +   Y       + A      L     +  +     + 
Sbjct: 120 ATGKGNDQVRFELGAYALNPDIKVIAPWREWELNSREKLLAYAESAGIS 168


>gi|111220611|ref|YP_711405.1| GMP synthase [Frankia alni ACN14a]
 gi|111148143|emb|CAJ59812.1| GMP synthetase (glutamine aminotransferase) [Frankia alni ACN14a]
          Length = 562

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 57/183 (31%), Gaps = 12/183 (6%)

Query: 12  LLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           +   SGG DS+   +       D +  +  D+G     E E               +  S
Sbjct: 262 ICGLSGGVDSAVAAALVHRAVGDALTCVFVDHGLLRAGEAEQVER----------DFVAS 311

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            G D +   A     +  +   +   K +        V   +   L  A   A    I +
Sbjct: 312 TGVDLVHVKAADRFAAALAGVTDPEHKRKIIGREFIRVFEESAREL-EARAEAEGATIEH 370

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V G    D           I++      L  +    +  PL  L K E  +L +++G  
Sbjct: 371 LVQGTLYPDVIESGSPTAAKIKSHHNVGGLPEDLRFGLVEPLRTLFKDEVRRLGEELGLP 430

Query: 191 DLV 193
           + +
Sbjct: 431 EEI 433


>gi|302381006|ref|ZP_07269467.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Finegoldia magna ACS-171-V-Col3]
 gi|302311227|gb|EFK93247.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Finegoldia magna ACS-171-V-Col3]
          Length = 366

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/189 (11%), Positives = 53/189 (28%), Gaps = 11/189 (5%)

Query: 5   IKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  +    ++  SGG DSS        +   V  +        + + +      +   + 
Sbjct: 1   MDNSKIKVVVGISGGVDSSVAALLLKQQGYDVVGIFMKNWD--ETDDDGVCTAEEDYKDA 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +    +   + + +         +  +      + +    PN  +     I        A
Sbjct: 59  VAVANEICIDYYSIN---FEKEYYDRVFTYFLDEYKKGRTPNPDIMCNKEIKFKAFLDFA 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            +LG   +  G       G    +      +          L  +    V  P+  L+K 
Sbjct: 116 MKLGADYVATGHYARIERGDDGVKLLRGLDNNKDQTYFLSQLTQDQIKNVMFPVGELQKK 175

Query: 179 ETWKLAQDI 187
           E  ++A+  
Sbjct: 176 EVREIAKKY 184


>gi|294674357|ref|YP_003574973.1| GMP synthase (glutamine-hydrolyzing) [Prevotella ruminicola 23]
 gi|294473645|gb|ADE83034.1| GMP synthase (glutamine-hydrolyzing) [Prevotella ruminicola 23]
          Length = 534

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 62/187 (33%), Gaps = 21/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS           +R+  +  D+G   K E                 +
Sbjct: 212 DRVILGLSGGVDSSVAAVLLNKAIGNRLTCIFVDHGMLRKNE-----------------F 254

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              + +  +L L ++G    +S      +    +      + GR+ + +  A        
Sbjct: 255 NQVMDDYKVLGLNVIG--VDASAKFFADLAGVTDPEQKRKIIGRDFVEVFNAEAKKIT-D 311

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +  G    D     +     I++      L  E H+ +  PL WL K E  ++ + +
Sbjct: 312 AKWLAQGTIYPDRIESLNITGKVIKSHHNVGGLPKEMHLQLCEPLQWLFKDEVRRVGRQL 371

Query: 188 GGQDLVN 194
           G  + + 
Sbjct: 372 GMPEHLI 378


>gi|258648071|ref|ZP_05735540.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella tannerae ATCC 51259]
 gi|260851930|gb|EEX71799.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella tannerae ATCC 51259]
          Length = 364

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 48/184 (26%), Gaps = 7/184 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +    +A  L SGG DS+  +    ++    +      G   + E +C     +      
Sbjct: 1   MGSMKTA-ALISGGVDSAVAVHLLKEQGITPDLFYIKIGNGPQGEWDC--KAEEDWEMAT 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +    +  ++ L             +   K    N                     Y
Sbjct: 58  AVARRYGCKLKLIDLQKEYWDEVVGYIVDRLRKGLTPNSDVMCNKYIKFGCFEEREGHNY 117

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETW 181
               T       ETD +G            +    L      +V     P+  L K E  
Sbjct: 118 DRIATG-HYAQTETDEAGRVWLTTAPDPIKDQTDFLAQLDGFSVRKLIFPIGGLMKDEVR 176

Query: 182 KLAQ 185
           K+AQ
Sbjct: 177 KIAQ 180


>gi|206579250|ref|YP_002236418.1| argininosuccinate synthase [Klebsiella pneumoniae 342]
 gi|226729194|sp|B5XSX1|ASSY_KLEP3 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|206568308|gb|ACI10084.1| argininosuccinate synthase [Klebsiella pneumoniae 342]
          Length = 447

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 23/57 (40%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +      K+      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRKKGAVPYAYTANLGQPDEDDYDAIPRRAKEYGAEGARLID 72


>gi|152972095|ref|YP_001337241.1| argininosuccinate synthase [Klebsiella pneumoniae subsp.
          pneumoniae MGH 78578]
 gi|238896678|ref|YP_002921423.1| argininosuccinate synthase [Klebsiella pneumoniae NTUH-K2044]
 gi|262042729|ref|ZP_06015883.1| argininosuccinate synthase [Klebsiella pneumoniae subsp.
          rhinoscleromatis ATCC 13884]
 gi|329997772|ref|ZP_08302911.1| argininosuccinate synthase [Klebsiella sp. MS 92-3]
 gi|166220986|sp|A6TEJ0|ASSY_KLEP7 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|150956944|gb|ABR78974.1| argininosuccinate synthase [Klebsiella pneumoniae subsp.
          pneumoniae MGH 78578]
 gi|238549005|dbj|BAH65356.1| argininosuccinate synthase [Klebsiella pneumoniae subsp.
          pneumoniae NTUH-K2044]
 gi|259039954|gb|EEW41071.1| argininosuccinate synthase [Klebsiella pneumoniae subsp.
          rhinoscleromatis ATCC 13884]
 gi|328538906|gb|EGF64967.1| argininosuccinate synthase [Klebsiella sp. MS 92-3]
          Length = 447

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 23/57 (40%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +      K+      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRKKGAVPYAYTANLGQPDEDDYDAIPRRAKEYGAEGARLID 72


>gi|298735640|ref|YP_003728165.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Helicobacter pylori B8]
 gi|298354829|emb|CBI65701.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Helicobacter pylori B8]
          Length = 360

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 52/184 (28%), Gaps = 17/184 (9%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           N+ +K      +L SGG DSS       ++   +  +         ++L          +
Sbjct: 14  NERLKM--KIAVLLSGGVDSSYSAYSLKEQGHELVGIY--------LKLHASEKKHDLYI 63

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +   K  + LG    L +        +++        ++   PN       ++    A  
Sbjct: 64  KNAQKACEFLGIP--LEVLDFQKDFKNAVYDEFISAYEEGQTPNPCALCNPLMKFGLALD 121

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWLK 176
            A +LG   I  G                    T         L  E    +  PL  L 
Sbjct: 122 HALQLGCEKIATGHYARVKEIDKVSYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLL 181

Query: 177 KYET 180
           K + 
Sbjct: 182 KKDI 185


>gi|154483751|ref|ZP_02026199.1| hypothetical protein EUBVEN_01455 [Eubacterium ventriosum ATCC
           27560]
 gi|149735242|gb|EDM51128.1| hypothetical protein EUBVEN_01455 [Eubacterium ventriosum ATCC
           27560]
          Length = 471

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 48/188 (25%), Gaps = 22/188 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS            ++  +  D+G   K E +    V            
Sbjct: 174 KVLCALSGGVDSSVAAVMLSKAIGKQLTCVFVDHGLLRKNEGDEVEAV------------ 221

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G D    L  +   +       +A   +               F+      A ++G 
Sbjct: 222 --FGPDGPYDLNFIRVNAQERYYSKLAGVKEPEQKRKII----GEEFIRVFEEEAKKIGA 275

Query: 129 TNIV---IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            + +       +   SG                         +  PL  L K E  K   
Sbjct: 276 VDFLVQGTIYPDVVESGLGGESAVIKSHHNVGGLPDCVDFKEIIEPLRDLFKDEVRKAGL 335

Query: 186 DIGGQDLV 193
           ++G  + +
Sbjct: 336 EMGIPEYL 343


>gi|28378785|ref|NP_785677.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus plantarum WCFS1]
 gi|254556990|ref|YP_003063407.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus plantarum JDM1]
 gi|308180978|ref|YP_003925106.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus plantarum subsp. plantarum ST-III]
 gi|38258513|sp|Q88V96|MNMA_LACPL RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|28271622|emb|CAD64528.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus plantarum WCFS1]
 gi|254045917|gb|ACT62710.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus plantarum JDM1]
 gi|308046469|gb|ADN99012.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus plantarum subsp. plantarum ST-III]
          Length = 374

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 46/194 (23%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS        +   V  +             C     +  
Sbjct: 1   MTD--HSNTRVVVGMSGGVDSSVVALLLKQQGYDVVGVFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            +      + +    PN  V     I      
Sbjct: 57  KDVAKVADKIGIPYYSIN---FEKEYWDRVFTYFLDEYKKGRTPNPDVICNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRH------DTIRAIETAINLGMESHVTVHTPLMW 174
             A  LG   I  G             H                 L  ++   V  PL  
Sbjct: 114 DYAMDLGADYIATGHYARLQHDEDGTMHLLRGVDSNKDQTYFLSQLDSKTLQKVMFPLGE 173

Query: 175 LKKYETWKLAQDIG 188
           + K +  KLA + G
Sbjct: 174 MVKPDVRKLALNAG 187


>gi|323703202|ref|ZP_08114855.1| GMP synthase, large subunit [Desulfotomaculum nigrificans DSM 574]
 gi|323531861|gb|EGB21747.1| GMP synthase, large subunit [Desulfotomaculum nigrificans DSM 574]
          Length = 513

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 53/184 (28%), Gaps = 20/184 (10%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            L   SGG DSS           D++  +  D+G   K E         ++V       +
Sbjct: 221 VLCALSGGVDSSVAAVLVHRAVGDKLTCVFVDHGLLRKNE-------AAQVVHTFRNLFN 273

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                       LG +   +  +     I    +       R +              I 
Sbjct: 274 IKLVHVDASERFLGKLKGVTDPEEKRKIIGAEFIRVFEEEARKLG------------DID 321

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G    D           I++      L  +    +  PL WL K E  +L + +G 
Sbjct: 322 FLVQGTLYPDVVESGTGTAAVIKSHHNVGGLPEDMKFELVEPLRWLFKDEVRRLGEQLGL 381

Query: 190 QDLV 193
            + +
Sbjct: 382 PEEI 385


>gi|322491706|emb|CBZ26978.1| putative GMP synthase [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 656

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 52/200 (26%), Gaps = 8/200 (4%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRK- 58
            +        L L SGG DS+ C    L     +RV  +  D+G     E    L     
Sbjct: 216 RERTSGDQKVLCLASGGVDSTVCAVLLLKALGPERVVCIHIDHGFMRLSESVQVLEALNV 275

Query: 59  -----KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
                 +V+    +  +  E            +  S   +   K          V  R I
Sbjct: 276 AGVRVHLVQAQEDFAQASTEMTAKGSRAAYTTNKLSEVTDPEEKRNIIGNTFMTVCDRVI 335

Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
             L            T     +         +         +TA+   +     +  PL 
Sbjct: 336 KELQLDVENLLLAQGTLRPDLIESGSKYASANADAIKTHHNDTAVVRLLREAGRIIEPLC 395

Query: 174 WLKKYETWKLAQDIGGQDLV 193
              K E  +L   +G    +
Sbjct: 396 DYHKDEVRELGARLGIPRHL 415


>gi|319651666|ref|ZP_08005793.1| TrmU protein [Bacillus sp. 2_A_57_CT2]
 gi|317396733|gb|EFV77444.1| TrmU protein [Bacillus sp. 2_A_57_CT2]
          Length = 371

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/179 (9%), Positives = 37/179 (20%), Gaps = 8/179 (4%)

Query: 5   IKKAPS---ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           +KK P     ++  SGG DSS       ++   V  +             C     +   
Sbjct: 1   MKKDPKDTRVVVGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDYN 58

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +++          + +             T  +             +     I       
Sbjct: 59  DVIRVCNQIGIPYYAVN--FEKQYWDKVFTYFLEEYKAGRTPNPDVMC-NKEIKFKAFLE 115

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            A  LG   +  G          + +              +          +     + 
Sbjct: 116 HAMSLGADYLATGHYARVEFRDGEYKMLRGLDDNKDQTYFLNQLTQDQLEKVMFPIGDI 174


>gi|302772965|ref|XP_002969900.1| hypothetical protein SELMODRAFT_93014 [Selaginella moellendorffii]
 gi|300162411|gb|EFJ29024.1| hypothetical protein SELMODRAFT_93014 [Selaginella moellendorffii]
          Length = 533

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 53/182 (29%), Gaps = 9/182 (4%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A+   SGG DSS   +       DR+  +  D G     E E  +   K+ + L P    
Sbjct: 230 AICALSGGVDSSVAATLVHKALGDRLHCVFVDNGLLRYKEQERVMETFKRELHL-PVVCV 288

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
               D +  L  + D                +   +                  Y   I 
Sbjct: 289 DASTDFLSRLRGVTDPEQKRKIIGAQFISVFDKFASHLEEELGKTATFLVQGTLYPDVIE 348

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
           +         +S         I++      L     + +  PL WL K E  KL + +G 
Sbjct: 349 SCPPPGSGKGHSHT-------IKSHHNVGGLPEVMKLKLLEPLKWLFKDEVRKLGKLLGV 401

Query: 190 QD 191
            +
Sbjct: 402 PE 403


>gi|258514039|ref|YP_003190261.1| GMP synthase [Desulfotomaculum acetoxidans DSM 771]
 gi|257777744|gb|ACV61638.1| GMP synthase, large subunit [Desulfotomaculum acetoxidans DSM 771]
          Length = 510

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 56/188 (29%), Gaps = 22/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS           D++  +  D+G   K E      V     +    
Sbjct: 215 NRQVLCALSGGVDSSVAAVLVHRAIGDQLTCVFVDHGLLRKGE---AEQVISTFRDKFHI 271

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                            ++      +    ++Q    P          F+      A +L
Sbjct: 272 -----------------NLIAVDAEERFLSRLQGVTDPERKRKIIGEEFIRVFEEEAAKL 314

Query: 127 G-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           G I  +V G    D           I++      L  +  + +  PL WL K E   L +
Sbjct: 315 GQIDYLVQGTLYPDVVESGTATAAVIKSHHNVGGLPEDMKLKLIEPLRWLFKDEVRVLGE 374

Query: 186 DIGGQDLV 193
           ++G  + V
Sbjct: 375 ELGIPEEV 382


>gi|255716424|ref|XP_002554493.1| KLTH0F06644p [Lachancea thermotolerans]
 gi|238935876|emb|CAR24056.1| KLTH0F06644p [Lachancea thermotolerans]
          Length = 418

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 5/59 (8%)

Query: 5  IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + K    + L +SGG D+S  L+W L+    V     + GQ  + + +        I  
Sbjct: 1  MSKGK--VCLAYSGGLDTSIILAWLLEEGYEVVAFMANVGQ--EEDFDAAEKKAMAIGA 55


>gi|227824500|ref|ZP_03989332.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226904999|gb|EEH90917.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 357

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 34/138 (24%), Gaps = 4/138 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
            AL+  SGG DSS      LD+       +   Y   +        C  + + +      
Sbjct: 2   KALIAMSGGVDSSVAAKLMLDQGYECVGCTMKLYNNPDAGCSSKTCCSIRDVEDARSVAV 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                  +       D     + +  A        PN  +     +        A  LG 
Sbjct: 62  RLGMPYFVFN---YMDEFRRDVMETFARSYTLGKTPNPCIDCNKFLKFGALYERAKELGC 118

Query: 129 TNIVIGVCETDYSGYPDC 146
             IV G            
Sbjct: 119 DTIVTGHYARIRKRNGCY 136


>gi|145631293|ref|ZP_01787065.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus influenzae R3021]
 gi|144983078|gb|EDJ90578.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus influenzae R3021]
          Length = 362

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 36/134 (26%), Gaps = 4/134 (2%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +    +   SGG DSS        +  +VE L        + + +   C     +     
Sbjct: 2   RQKKVICGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQA 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D LG   +  +    +   +     +             +  + I F  F    A  L
Sbjct: 59  VCDKLG-IKLHKINFAAEYWDNVFEHFLTEYKAGRTPNPDILCNKEIKFKAFLEYAAEDL 117

Query: 127 GITNIVIGVCETDY 140
           G   I  G      
Sbjct: 118 GAHYIATGHYVRRA 131


>gi|28952048|ref|NP_240085.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Buchnera aphidicola str. APS (Acyrthosiphon pisum)]
 gi|11135216|sp|P57349|MNMA_BUCAI RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 368

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 48/183 (26%), Gaps = 15/183 (8%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--------RLCVRKKIVELM 64
           +  SGG DSS C      +  +VE L     + +  E  C           + KK+   +
Sbjct: 11  VAMSGGVDSSVCAWILKKQNYQVEGLFMKNWEEDDQEGYCSSTKDLLDAENICKKLNIYL 70

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            K   S      +    L +    +           + L N  +     +        A 
Sbjct: 71  HKMNFSSEYWEYVFENFLKEYKKGNTPNP-------DILCNKEIKFNMFLNYSIQELKAD 123

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            +   +                             L       +  P+  LKK +   +A
Sbjct: 124 YIATGHYARIKKINGKYLLLKGIDTNKDQSYFLYTLNSIQLRKILFPIGHLKKNKVRNIA 183

Query: 185 QDI 187
           + I
Sbjct: 184 KKI 186


>gi|262306049|gb|ACY45617.1| gln amidotransferase [Hanseniella sp. 'Han2']
          Length = 197

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 10 SALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
            L+L SGG DS+ C +      + D+V  L  + G   K E        KKI 
Sbjct: 45 KVLMLVSGGVDSTVCAALLHKALKEDQVIVLHINNGFMRKGESAQVETSLKKIG 98


>gi|55958408|emb|CAI16158.1| argininosuccinate synthetase 1 [Homo sapiens]
          Length = 198

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 21/48 (43%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
          +    S +L +SGG D+S  L W  ++   V     + GQ+   E   
Sbjct: 1  MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48


>gi|28377631|ref|NP_784523.1| argininosuccinate synthase [Lactobacillus plantarum WCFS1]
 gi|254555810|ref|YP_003062227.1| argininosuccinate synthase [Lactobacillus plantarum JDM1]
 gi|300767600|ref|ZP_07077510.1| argininosuccinate synthase [Lactobacillus plantarum subsp.
          plantarum ATCC 14917]
 gi|308179791|ref|YP_003923919.1| argininosuccinate synthase [Lactobacillus plantarum subsp.
          plantarum ST-III]
 gi|30172775|sp|P59603|ASSY_LACPL RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|28270464|emb|CAD63366.1| argininosuccinate synthase [Lactobacillus plantarum WCFS1]
 gi|254044737|gb|ACT61530.1| argininosuccinate synthase [Lactobacillus plantarum JDM1]
 gi|300494585|gb|EFK29743.1| argininosuccinate synthase [Lactobacillus plantarum subsp.
          plantarum ATCC 14917]
 gi|308045282|gb|ADN97825.1| argininosuccinate synthase [Lactobacillus plantarum subsp.
          plantarum ST-III]
          Length = 411

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 2/61 (3%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
          ++K+    +L +SGG D+S  +SW  D+   V     D G     +++       K+  +
Sbjct: 1  MVKQNDKIILAYSGGLDTSVAISWLKDKGYDVVACGIDVG--EGKDMDAIKEKALKLGAV 58

Query: 64 M 64
           
Sbjct: 59 S 59


>gi|194476897|ref|YP_002049076.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Paulinella chromatophora]
 gi|171191904|gb|ACB42866.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Paulinella chromatophora]
          Length = 527

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 49/191 (25%), Gaps = 19/191 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSST           ++  +  D G   K E E               
Sbjct: 223 TKRVLLALSGGVDSSTLAFLLHKTIRNQLTCMFIDQGFMRKGEPEF-------------- 268

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D       L +  +                ++          R              L
Sbjct: 269 LMDFFDRKFNLKVQYINARERFIEKLRGIFDPEEKRRIIGTEFIRVFEEESKLLGPFDYL 328

Query: 127 GITNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
               +   V E+  +       +     I++      L  +    +  PL  L K E  +
Sbjct: 329 AQGTLYPDVIESAGTNLDPKTGERVAVKIKSHHNVGGLPKDLQFKLVEPLRRLFKDEVRR 388

Query: 183 LAQDIGGQDLV 193
           + + +G  + +
Sbjct: 389 VGRSLGLPEEI 399


>gi|78188235|ref|YP_378573.1| tRNA-specific 2-thiouridylase MnmA [Chlorobium chlorochromatii
           CaD3]
 gi|123580466|sp|Q3ATZ5|MNMA_CHLCH RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|78170434|gb|ABB27530.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chlorobium chlorochromatii CaD3]
          Length = 359

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 47/189 (24%), Gaps = 10/189 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      L+  SGG DS+      + +  RV  +         ++          +    
Sbjct: 1   MSTPHHILVGISGGVDSAVATCLLVQQGYRVTAV-----NLRLLDTLDAPYAEPTLQPSS 55

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
               D       L    L       + +    +      PN  +     +        A 
Sbjct: 56  LVVSDHPDYHIPLFSLNLSRTFRDEVMRYFNAEYLAGRTPNPCMVCNRQVKWAGLRHAAE 115

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETA-----INLGMESHVTVHTPLMWLKKYE 179
            +G   I  G            R       +         L  +       PL  L K E
Sbjct: 116 LIGANAIATGHYANRAFSDGRYRLYKGADSQKDQSYFLWMLSQKDLAHTLLPLGGLTKPE 175

Query: 180 TWKLAQDIG 188
             +LA++ G
Sbjct: 176 VRELAKNFG 184


>gi|19747021|ref|NP_608157.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pyogenes
           MGAS8232]
 gi|19749279|gb|AAL98656.1| tRNA-methyltransferase [Streptococcus pyogenes MGAS8232]
          Length = 379

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 50/192 (26%), Gaps = 12/192 (6%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +   +    ++  SGG DSS       ++   V  +             C     +   +
Sbjct: 7   MTDNSKIRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDYKD 64

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +           + +            + +    + +    PN  V     I        
Sbjct: 65  VAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLGY 121

Query: 123 AYRLGITNIVIGVCET----DYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLK 176
           A  LG   +  G        +       R       +T     L  E       PL  L+
Sbjct: 122 AMTLGADYVATGHYAQVKRDENGTVHMLRGADNGKDQTYFLSQLSQEQLQKTLFPLGHLQ 181

Query: 177 KYETWKLAQDIG 188
           K E  ++A+  G
Sbjct: 182 KSEVREIAERAG 193


>gi|332359520|gb|EGJ37339.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus sanguinis SK1056]
          Length = 373

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 50/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D  K     ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSDNSKI--RVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYALTLGADYVATGHYAQVKRDQDGLVHMLRGKDNNKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E   +A+  G
Sbjct: 174 LEKPEVRAIAERAG 187


>gi|325577519|ref|ZP_08147881.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus parainfluenzae ATCC 33392]
 gi|325160623|gb|EGC72747.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus parainfluenzae ATCC 33392]
          Length = 384

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 35/135 (25%), Gaps = 4/135 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 +   SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 22  NATKKVICGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 78

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     +             +  + I F  F    A  
Sbjct: 79  AVCDKLG-IKLHKINFAAEYWDNVFEHFLTEYKAGRTPNPDILCNKEIKFKAFLEYAAED 137

Query: 126 LGITNIVIGVCETDY 140
           LG   I  G      
Sbjct: 138 LGAHYIATGHYVRRA 152


>gi|294507733|ref|YP_003571791.1| cell cycle protein MesJ [Salinibacter ruber M8]
 gi|294344061|emb|CBH24839.1| cell cycle protein MesJ [Salinibacter ruber M8]
          Length = 468

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 19/43 (44%)

Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR 53
           L+  SGG DS TCLS        V  L  +YG R   + +  
Sbjct: 24 VLVAASGGVDSMTCLSVLRRLDADVHALHVNYGLRAGADGDEA 66


>gi|300779755|ref|ZP_07089611.1| GMP synthase (glutamine-hydrolyzing) [Corynebacterium genitalium
           ATCC 33030]
 gi|300533865|gb|EFK54924.1| GMP synthase (glutamine-hydrolyzing) [Corynebacterium genitalium
           ATCC 33030]
          Length = 535

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 60/193 (31%), Gaps = 11/193 (5%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
           ++ I     A+   SGG DS+   +       DR+  +  D+G   K E E         
Sbjct: 224 SEQIGPDGHAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRKGERE--------- 274

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++   +  + G   +        +   +   +   K +           R +  +V  +
Sbjct: 275 -QVETDFVAATGARLVTVDEREAFLCKLAGVTDPEEKRKAIGAEFIRSFERAVADVVSHS 333

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
               +     +   +               I++      L  +    +  PL  L K E 
Sbjct: 334 ASGQQDVGFLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPDDVEFELVEPLRTLFKDEV 393

Query: 181 WKLAQDIGGQDLV 193
             + +++G  +++
Sbjct: 394 RAVGRELGLPEVI 406


>gi|167580628|ref|ZP_02373502.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia thailandensis TXDOH]
          Length = 386

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 43/189 (22%), Gaps = 10/189 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS       ++   V  L     + +     C         + +   
Sbjct: 3   KRRVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQ-----DWIDVV 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +      +            +      +      PN  V     I        A  LG
Sbjct: 58  SVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLG 117

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G                    T         L          PL  + K +  +
Sbjct: 118 AETIATGHYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTKVRE 177

Query: 183 LAQDIGGQD 191
           +A  IG  +
Sbjct: 178 IAAQIGLPN 186


>gi|138895516|ref|YP_001125969.1| hypothetical protein GTNG_1864 [Geobacillus thermodenitrificans
           NG80-2]
 gi|134267029|gb|ABO67224.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
           NG80-2]
          Length = 274

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 36/86 (41%), Gaps = 1/86 (1%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           ++K+  + L+ FSGG DS+  L+ A +   D+V  ++         E++    + ++I  
Sbjct: 15  LLKEMGNVLVAFSGGVDSTFLLAMAKEALGDQVLAVTAVSETFPVREVQHATKLAEQIGV 74

Query: 63  LMPKWKDSLGEDHILPLAILGDISHS 88
              K +    E+       L    H 
Sbjct: 75  KHIKIQIHELENEDFVKNDLHRCFHC 100


>gi|154174151|ref|YP_001409218.1| thiamine biosynthesis protein:ExsB [Campylobacter curvus 525.92]
 gi|112803489|gb|EAU00833.1| thiamine biosynthesis protein:ExsB [Campylobacter curvus 525.92]
          Length = 329

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 22/60 (36%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           AL LFSGG DS   +    D+   V  L  D G     +    L  R  +     K  D
Sbjct: 2  KALALFSGGLDSMLAMKIISDQGIEVVALYMDTGFGVDEDKHAVLERRANLAGAKFKVVD 61


>gi|312866787|ref|ZP_07727000.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus parasanguinis F0405]
 gi|311097570|gb|EFQ55801.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus parasanguinis F0405]
          Length = 373

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 50/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D        ++  SGG DSS        +   V  +             C     +  
Sbjct: 1   MSD--NSETRVVVGMSGGVDSSVTALLLKQQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYARVSRDEDGIVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  +LA++ G
Sbjct: 174 LEKPEVRRLAEEAG 187


>gi|288933401|ref|YP_003437460.1| argininosuccinate synthase [Klebsiella variicola At-22]
 gi|290511548|ref|ZP_06550917.1| argininosuccinate synthase [Klebsiella sp. 1_1_55]
 gi|288888130|gb|ADC56448.1| argininosuccinate synthase [Klebsiella variicola At-22]
 gi|289776541|gb|EFD84540.1| argininosuccinate synthase [Klebsiella sp. 1_1_55]
          Length = 447

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 23/57 (40%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +      K+      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRKKGAVPYAYTANLGQPDEDDYDAIPRRAKEYGAEGARLID 72


>gi|53712700|ref|YP_098692.1| tRNA-specific 2-thiouridylase MnmA [Bacteroides fragilis YCH46]
 gi|81608589|sp|Q64WG8|MNMA2_BACFR RecName: Full=tRNA-specific 2-thiouridylase mnmA 2
 gi|52215565|dbj|BAD48158.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides fragilis YCH46]
          Length = 353

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 49/181 (27%), Gaps = 7/181 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
            L SGG DSS  +    ++  +        G      ++C     + I       +    
Sbjct: 5   ALLSGGVDSSVVVHLLCEQGYKPTLFYIKIGMDGAEYMDCS--AEEDIELSTAIARRYGL 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
              ++ L    +   +     +    +        +  + I F  F   +     +T   
Sbjct: 63  ALEVVDLH--REYWDNVAAYAIEKIRKGQTPNPDVMCNKLIKFGCFEQQVGKDFDLTATG 120

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLAQDIGG 189
                    G            +    L    ++ V     P+  L K+E  ++A   G 
Sbjct: 121 HYATTLQLGGKTWLGTAKDPIKDQTDFLAQIDYLQVSKLLFPIGGLMKHEVREIALRAGL 180

Query: 190 Q 190
            
Sbjct: 181 P 181


>gi|116618554|ref|YP_818925.1| argininosuccinate synthase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122271246|sp|Q03W70|ASSY_LEUMM RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|116097401|gb|ABJ62552.1| argininosuccinate synthase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 408

 Score = 48.4 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 56/194 (28%), Gaps = 20/194 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              + +L +SGG D+S  + W  D+   V  +  D GQ  K   E +    K        
Sbjct: 1   MTDTLVLAYSGGLDTSVAIPWLKDKGYDVIAVVLDVGQHGKNLNEIQAKALK-------- 52

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +G    + +    + +   +   +   +               + +     +A+  
Sbjct: 53  ----VGAKQSIVIDAKAEFADKYVAPVIKANMMYEGEYPMVSALSRPLIIKKLVDIAHEN 108

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I         S           A   A++  M+    +        + E  + AQ+
Sbjct: 109 DAVAI------AHGSTGHGNDQVRFEAAIHALDPDMKIEAPIRDFQ--WSREEEIQYAQE 160

Query: 187 IGGQDLVNLILEES 200
                 ++L    S
Sbjct: 161 HDVPVPIDLDSPYS 174


>gi|218462430|ref|ZP_03502521.1| argininosuccinate synthase protein [Rhizobium etli Kim 5]
          Length = 337

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + +K    +L +SGG D+S  L W  +     V T + D GQR   ELE      K +  
Sbjct: 1  MARKIGKIVLAYSGGLDTSIILKWLQETYGCEVVTFTADLGQR--EELETARAKAKMLGV 58

Query: 63 LMPKWKD 69
             +  D
Sbjct: 59 RDIRIVD 65


>gi|219120979|ref|XP_002185721.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|209582570|gb|ACI65191.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 418

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 50/173 (28%), Gaps = 6/173 (3%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE- 62
           +    P  LL +SGG D+S  L W  ++   V     + GQ ++ +        +     
Sbjct: 1   MTDAKPKLLLAYSGGLDTSVILKWLSEKGFDVIAFCANVGQ-HEEDFSAVKAKAESCGAT 59

Query: 63  --LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             ++   +    +D++L       I         ++      +    +   +     F A
Sbjct: 60  KCVISDLRKEFVDDYVLEAIKCNAIYEGRYLLGTSIARP--CIAKEMIRIAHEEGATFIA 117

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
             A   G   +   +C    S    C      A       G +  +       
Sbjct: 118 HGATGKGNDQVRFEMCCQALSPTIQCVAPWRDAEFIESFKGRKDLLAYCNQHQ 170


>gi|251794097|ref|YP_003008828.1| tRNA(Ile)-lysidine synthetase [Paenibacillus sp. JDR-2]
 gi|247541723|gb|ACS98741.1| tRNA(Ile)-lysidine synthetase [Paenibacillus sp. JDR-2]
          Length = 475

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 59/207 (28%), Gaps = 32/207 (15%)

Query: 1   MNDIIK---------KAPSALLLFSGGQDSSTCLSW----ALDRFDRVETLSFDYGQRNK 47
           + D++K         K    +   SGG DS   L      A      V     ++G R  
Sbjct: 9   LTDMMKYRATEQLWSKGDRIVAAVSGGPDSMALLHLLWQAARQEQLTVIAAHVNHGFRKD 68

Query: 48  VELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF 107
              +    VR+   +L         E   L +    + +  +       K          
Sbjct: 69  ASRQEAEVVRQYAEKL-----GVPFEMIELDMPAYIEETGINAQSAAREKRYAFLHETAV 123

Query: 108 VPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
             G + I L   A       +  ++ G   T  +G    R +               +V 
Sbjct: 124 KYGASAIALAHHADDQAETVLMRVIRGAGLTGLAGMAPKRKE--------------KNVE 169

Query: 168 VHTPLMWLKKYETWKLAQDIGGQDLVN 194
           +  PL+ + K +  +   +      ++
Sbjct: 170 LIRPLLRMNKSDIVRYCSERDVPYCLD 196


>gi|197117160|ref|YP_002137587.1| GMP synthase [Geobacter bemidjiensis Bem]
 gi|197086520|gb|ACH37791.1| guanosine monophosphate synthase [Geobacter bemidjiensis Bem]
          Length = 516

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DS+           D++  +  + G   K E         K+V L  K  
Sbjct: 221 KVLCALSGGVDSAVVAVLIHKAIGDQLHCVFVNNGLLRKGE-------ADKVVNLFTKHF 273

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY-RLG 127
                        LG +   S  +               + G   I+L         ++ 
Sbjct: 274 KINLAHVDAADRFLGMLEGVSDPEQKRK-----------IIGNEFIYLFEEEAKKLGQVD 322

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    +   S         I++      L  + ++ +  P+  L K E   L +++
Sbjct: 323 YLAQGTLYPDVIESVSTKGPSAVIKSHHNVGGLPEKMNLKLLEPVRELFKDEVRLLGKEL 382

Query: 188 GGQDLV 193
           G  D V
Sbjct: 383 GMPDEV 388


>gi|328945150|gb|EGG39305.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus sanguinis SK1087]
          Length = 373

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 50/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D  K     ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSDNSKI--RVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYALTLGADYVATGHYAQVKRDQDGLVHMLRGKDNNKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E   +A+  G
Sbjct: 174 LEKPEVRAIAERAG 187


>gi|283851129|ref|ZP_06368413.1| argininosuccinate synthase [Desulfovibrio sp. FW1012B]
 gi|283573525|gb|EFC21501.1| argininosuccinate synthase [Desulfovibrio sp. FW1012B]
          Length = 398

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQ 44
          +      +L +SGG D+S  L W    +   V T++ D GQ
Sbjct: 1  MSTIKKVVLAYSGGLDTSVILKWIKKTYACEVVTVTCDLGQ 41


>gi|262306013|gb|ACY45599.1| gln amidotransferase [Artemia salina]
          Length = 200

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+L SGG DS+ C +        D++  +  D G   K E+        K+   +   
Sbjct: 45  KVLVLLSGGVDSTVCAALLTRALGPDQLVPIHIDNGFLRKSEVNLVERSLLKLGLSVKVI 104

Query: 68  K 68
           +
Sbjct: 105 R 105


>gi|260912505|ref|ZP_05919040.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella sp. oral taxon 472 str. F0295]
 gi|260633384|gb|EEX51539.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella sp. oral taxon 472 str. F0295]
          Length = 358

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 42/181 (23%), Gaps = 7/181 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
               +L SGG DSS  +          +      G     E +C     + +       K
Sbjct: 9   KKIAVLLSGGVDSSVVVYEFNRLGLHPDCFYIKIGPEEAEEWDCASE--EDLEMATAVAK 66

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               +  ++      +         +             +  R I F  F     +   +
Sbjct: 67  RFGCKLEVVD--CHKEYWEQVTRYTMDKVKAGFTPNPDVMCNRLIKFGAFHEKRGHEYDL 124

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLAQ 185
                        G            +    L       +     P+   +K E  ++A+
Sbjct: 125 IATGHYAQTEWIDGKKWLVTSPDPVKDQTDFLAQIYDWQLQKAIFPIGHYQKGEVREIAE 184

Query: 186 D 186
            
Sbjct: 185 R 185


>gi|125719134|ref|YP_001036267.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus sanguinis SK36]
 gi|166235087|sp|A3CRB2|MNMA_STRSV RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|125499051|gb|ABN45717.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
           putative [Streptococcus sanguinis SK36]
          Length = 373

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 50/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D  K     ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSDNSKI--RVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYALTLGADYVATGHYAQVKRDQDGLVHMLRGKDNNKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E   +A+  G
Sbjct: 174 LEKPEVRAIAERAG 187


>gi|125972703|ref|YP_001036613.1| argininosuccinate synthase [Clostridium thermocellum ATCC 27405]
 gi|256004862|ref|ZP_05429836.1| argininosuccinate synthase [Clostridium thermocellum DSM 2360]
 gi|281416891|ref|ZP_06247911.1| argininosuccinate synthase [Clostridium thermocellum JW20]
 gi|171769984|sp|A3DBU1|ASSY_CLOTH RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|125712928|gb|ABN51420.1| argininosuccinate synthase [Clostridium thermocellum ATCC 27405]
 gi|255991172|gb|EEU01280.1| argininosuccinate synthase [Clostridium thermocellum DSM 2360]
 gi|281408293|gb|EFB38551.1| argininosuccinate synthase [Clostridium thermocellum JW20]
 gi|316941061|gb|ADU75095.1| argininosuccinate synthase [Clostridium thermocellum DSM 1313]
          Length = 405

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 25/202 (12%), Positives = 64/202 (31%), Gaps = 11/202 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +    +L +SGG D+S  + W  + +   V  ++ D GQ  ++E      ++      
Sbjct: 1   MSQKEKVILAYSGGLDTSIIIPWLKENYDYEVIAMAADVGQGEELEPLREKAIK---TGA 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + + L E+ +         +  +        +   +     +  R +   +     A
Sbjct: 58  SKIYIEDLKEEFVTDFIF---PTLKAGAVYEGKYLLGTSFARPLIAKRMVEIALKEGATA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESHVTVHTPLMWLKKYE 179
              G T         + +      H  I A     ++        +       + + K +
Sbjct: 115 VAHGATGKGNDQVRFELTVKALAPHLKIIAPWRIWDIKSREDEIEYAQARNIPIPVSKED 174

Query: 180 TWKLAQDIGGQDLVNLILEESH 201
            + + +++       L LE+  
Sbjct: 175 NYSMDRNLWHLSHEGLDLEDPW 196


>gi|311111904|ref|YP_003983126.1| GMP synthase [Rothia dentocariosa ATCC 17931]
 gi|310943398|gb|ADP39692.1| GMP synthase [Rothia dentocariosa ATCC 17931]
          Length = 530

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 52/187 (27%), Gaps = 11/187 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS   +       D++     D+G     E E          ++   
Sbjct: 225 EDRVICALSGGVDSSVAAALVHKAVGDQLTCFFIDHGLLRAGERE----------QVEQD 274

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  S+G   I        ++  +   +   K +           +    L+  A      
Sbjct: 275 YAASMGIRVITIDESERFLTALAGVSDPEQKRKIIGREFIRSFEQAERKLIEEAGEEGAQ 334

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +               I++      L  +    +  PL  L K E   + + 
Sbjct: 335 IKFLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPEDLAFELVEPLRTLFKDEVRAIGRQ 394

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 395 LGVPEKI 401


>gi|126665050|ref|ZP_01736033.1| argininosuccinate synthase [Marinobacter sp. ELB17]
 gi|126630420|gb|EBA01035.1| argininosuccinate synthase [Marinobacter sp. ELB17]
          Length = 403

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 53/173 (30%), Gaps = 7/173 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  + W  D     V T + D GQ  +VE      V+ K + +
Sbjct: 1   MSDINKVVLAYSGGLDTSVIVRWLQDTYGCEVVTFTADIGQGEEVEP---ARVKAKALGV 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + + L E+ +            + T      +   ++    +  R I         A
Sbjct: 58  KEIYIEDLREEFVRDYVF---PMFRANTVYEGEYLLGTSIARPLIAKRLIEIANSTGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
              G T         +   Y       + A     +L     +  +     + 
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDLNSREKLLAYCAERDIP 167


>gi|167034615|ref|YP_001669846.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas putida GB-1]
 gi|189040506|sp|B0KMQ6|MNMA_PSEPG RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|166861103|gb|ABY99510.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudomonas putida GB-1]
          Length = 374

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 48/186 (25%), Gaps = 10/186 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS      +++  +VE L     + +     C    R+ + +     
Sbjct: 11  KTRVIVGMSGGVDSSVSALLLIEQGYQVEGLFMKNWEEDDGTEYC--TAREDLADAQAVC 68

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                + H        +   +     +             +  R  I        A  LG
Sbjct: 69  DRIGIKLHT--ANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFKAFLDYALSLG 125

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G                              +G +       P+  L+K E   
Sbjct: 126 ADLIATGHYVRRRDTGDLTELLKGLDPNKDQSYFLHAVGGKEIARTLFPVGELEKPEVRA 185

Query: 183 LAQDIG 188
           +A+  G
Sbjct: 186 IAEKHG 191


>gi|89072449|ref|ZP_01159028.1| galactosyl transferase, GDP-mannosepyrophosphorylase,
           phosphomannomutase [Photobacterium sp. SKA34]
 gi|89051981|gb|EAR57433.1| galactosyl transferase, GDP-mannosepyrophosphorylase,
           phosphomannomutase [Photobacterium sp. SKA34]
          Length = 562

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 53/171 (30%), Gaps = 7/171 (4%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           A+   SGG DS   ++  L R  ++E ++F Y QR++ E+       +     +     S
Sbjct: 238 AISTLSGGLDSRVIVAELLKRGIKLECMNFSY-QRSQDEVY-AEVFAQCHDFPLHIVNVS 295

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF---VPGRNIIFLVFAATLAYRLG 127
             ++H +    LG    S+         +   + +     V    +              
Sbjct: 296 DTQEHSIEQR-LGHYWRSTQYPFYQQVERPRLVWSGNGGSVCIGMVFCDDHILAACASGD 354

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
              +     +  ++  P         ++  +   +   +      + L K 
Sbjct: 355 PFAVAKAYLKHQHAFIPKRMVKQGAKLQRQLEQNIVECLC-QYSHLPLDKA 404


>gi|119383251|ref|YP_914307.1| argininosuccinate synthase [Paracoccus denitrificans PD1222]
 gi|171704464|sp|A1AZB7|ASSY_PARDP RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|119373018|gb|ABL68611.1| argininosuccinate synthase [Paracoccus denitrificans PD1222]
          Length = 408

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 21/158 (13%), Positives = 44/158 (27%), Gaps = 5/158 (3%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +       +L +SGG D+S  L W   +    V T + D GQ  ++E        + +  
Sbjct: 1   MSDAPKKVVLAYSGGLDTSIILKWLQTEYGCEVITFTADLGQGEELEP--ARQKAELLGI 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                   + +     +         +      + +   ++    +    +         
Sbjct: 59  KPENI--HIVDVREEFVRDFVFPMFRANAVYEGLYLLGTSIARPLISKHLVEIAHQHGAD 116

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         + S Y       + A     +L
Sbjct: 117 AVAHGATGKGNDQVRFELSAYALDPSIKVIAPWREWDL 154


>gi|323350805|ref|ZP_08086464.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus sanguinis VMC66]
 gi|322122979|gb|EFX94682.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus sanguinis VMC66]
 gi|332365071|gb|EGJ42836.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus sanguinis SK355]
          Length = 373

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 49/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D  K     ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSDNSKI--RVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +          + + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWNRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A  LG   +  G             H                 L  E       PL  
Sbjct: 114 DYALTLGADYVATGHYAQIKRDQDGLVHMLRGKDNNKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E   +A+  G
Sbjct: 174 LEKPEVRAIAERAG 187


>gi|255975449|ref|ZP_05426035.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis T2]
 gi|256961498|ref|ZP_05565669.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis Merz96]
 gi|293385188|ref|ZP_06631008.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis R712]
 gi|293388180|ref|ZP_06632702.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis S613]
 gi|307277736|ref|ZP_07558822.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX0860]
 gi|312908274|ref|ZP_07767238.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis DAPTO 512]
 gi|312910654|ref|ZP_07769495.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis DAPTO 516]
 gi|255968321|gb|EET98943.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis T2]
 gi|256951994|gb|EEU68626.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis Merz96]
 gi|291077561|gb|EFE14925.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis R712]
 gi|291082420|gb|EFE19383.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis S613]
 gi|306505615|gb|EFM74799.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX0860]
 gi|310625688|gb|EFQ08971.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis DAPTO 512]
 gi|311289030|gb|EFQ67586.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis DAPTO 516]
          Length = 374

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 49/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MAD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAKVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRLGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A +LG   +  G      +         R       +T     L          PL  
Sbjct: 114 DYAMQLGADYVATGHYAQVETDENGVVHMLRGIDNNKDQTYFLSQLSQTQLAKTMFPLGG 173

Query: 175 LKKYETWKLAQDIG 188
           ++K E   +A+  G
Sbjct: 174 MEKSEVRAIAERAG 187


>gi|23016162|ref|ZP_00055921.1| COG0137: Argininosuccinate synthase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 490

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 53/177 (29%), Gaps = 15/177 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE---LM 64
              +L +SGG D+S  L W  D++   V T + D GQ  ++E          I E    +
Sbjct: 6   KKVVLAYSGGLDTSIILRWLQDQYSCEVVTFTADLGQGEELEPARAKARLMGIKEENIFI 65

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              ++   +D + P+     +         ++           +  R I         A 
Sbjct: 66  DDLREEFVKDFVFPMFRANALYEGVYLLGTSIARP-------LISKRQIEIANLVGADAV 118

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV----TVHTPLMWLKK 177
             G T         +   Y       + A     +L   + +      H   +   K
Sbjct: 119 SHGATGKGNDQVRFEMGYYALKPDIKVIAPWRLWDLNSRTALLDFAEKHQIPIAKDK 175


>gi|317178074|dbj|BAJ55863.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Helicobacter pylori F16]
          Length = 342

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 48/176 (27%), Gaps = 15/176 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS       ++   +  +         ++L          ++   K  +
Sbjct: 2   KIAVLLSGGVDSSYSAYSLKEQGHELVGIY--------LKLHASEKKHDLYIKNAQKACE 53

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG    L +        S++        ++   PN       ++    A   A +LG  
Sbjct: 54  FLGIP--LEVLDFQKDFKSAVYDEFISAYEEGQTPNPCTLCNPLMKFGLALDHALKLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            I  G                    T         L  E    +  PL  L K + 
Sbjct: 112 KIATGHYARVKEIDKVSYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDI 167


>gi|296327469|ref|ZP_06870015.1| ThiI family protein [Fusobacterium nucleatum subsp. nucleatum
          ATCC 23726]
 gi|296155295|gb|EFG96066.1| ThiI family protein [Fusobacterium nucleatum subsp. nucleatum
          ATCC 23726]
          Length = 333

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 7/77 (9%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVET---LSFDYGQRNKVELECRLCVRKKIVELMPK 66
           AL LFSGG DS+  +    ++   V     +S  +G +     E    + K++   +  
Sbjct: 5  KALALFSGGLDSALAIKVVQEQGIEVIALNFVSHFFGGK----NEKAESMAKQLGIRLEY 60

Query: 67 WKDSLGEDHILPLAILG 83
                   ++   + G
Sbjct: 61 IDFKKRHILVVEDPVYG 77


>gi|317154023|ref|YP_004122071.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Desulfovibrio aespoeensis Aspo-2]
 gi|316944274|gb|ADU63325.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Desulfovibrio aespoeensis Aspo-2]
          Length = 349

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 34/130 (26%), Gaps = 11/130 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            +A+ + SGG DS   L+        V  +       +   L       K I  L     
Sbjct: 2   KTAVAV-SGGMDSLLALALMRAGGHEVLAV-------HGRFLPSGPDSDKAIAGLAEACA 53

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 H+  L    +    +   +   + +  N      P      L      A  LG 
Sbjct: 54  RLGVPLHVADLRREFEREVVAPFADAYRQGRTPNPCAVCNPRMKFGALFR---FALSLGA 110

Query: 129 TNIVIGVCET 138
             +  G    
Sbjct: 111 DALATGHYAR 120


>gi|260494762|ref|ZP_05814892.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Fusobacterium sp. 3_1_33]
 gi|260197924|gb|EEW95441.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Fusobacterium sp. 3_1_33]
          Length = 333

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 7/77 (9%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVET---LSFDYGQRNKVELECRLCVRKKIVELMPK 66
           AL LFSGG DS+  +    ++   V     +S  +G +     E    + K++   +  
Sbjct: 5  KALALFSGGLDSALAIKVVQEQGIEVIALNFVSHFFGGK----NEKAESMAKQLGIKLEY 60

Query: 67 WKDSLGEDHILPLAILG 83
                   ++   + G
Sbjct: 61 IDFKKRHILVVEDPVYG 77


>gi|256844917|ref|ZP_05550375.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Fusobacterium sp. 3_1_36A2]
 gi|256718476|gb|EEU32031.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Fusobacterium sp. 3_1_36A2]
          Length = 333

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 7/77 (9%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVET---LSFDYGQRNKVELECRLCVRKKIVELMPK 66
           AL LFSGG DS+  +    ++   V     +S  +G +     E    + K++   +  
Sbjct: 5  KALALFSGGLDSALAIKVVQEQGIEVIALNFVSHFFGGK----NEKAESMAKQLGIKLEY 60

Query: 67 WKDSLGEDHILPLAILG 83
                   ++   + G
Sbjct: 61 IDFKKRHILVVEDPVYG 77


>gi|256026888|ref|ZP_05440722.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
          [Fusobacterium sp. D11]
          Length = 332

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 7/77 (9%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVET---LSFDYGQRNKVELECRLCVRKKIVELMPK 66
           AL LFSGG DS+  +    ++   V     +S  +G +     E    + K++   +  
Sbjct: 5  KALALFSGGLDSALAIKVVQEQGIEVIALNFVSHFFGGK----NEKAESMAKQLGIKLEY 60

Query: 67 WKDSLGEDHILPLAILG 83
                   ++   + G
Sbjct: 61 IDFKKRHILVVEDPVYG 77


>gi|237744985|ref|ZP_04575466.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Fusobacterium sp. 7_1]
 gi|229432214|gb|EEO42426.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Fusobacterium sp. 7_1]
          Length = 333

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 7/77 (9%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVET---LSFDYGQRNKVELECRLCVRKKIVELMPK 66
           AL LFSGG DS+  +    ++   V     +S  +G +     E    + K++   +  
Sbjct: 5  KALALFSGGLDSALAIKVVQEQGIEVIALNFVSHFFGGK----NEKAESMAKQLGIKLEY 60

Query: 67 WKDSLGEDHILPLAILG 83
                   ++   + G
Sbjct: 61 IDFKKRHILVVEDPVYG 77


>gi|237741595|ref|ZP_04572076.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Fusobacterium sp. 4_1_13]
 gi|294785797|ref|ZP_06751085.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
          [Fusobacterium sp. 3_1_27]
 gi|229429243|gb|EEO39455.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Fusobacterium sp. 4_1_13]
 gi|294487511|gb|EFG34873.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
          [Fusobacterium sp. 3_1_27]
          Length = 333

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 7/77 (9%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVET---LSFDYGQRNKVELECRLCVRKKIVELMPK 66
           AL LFSGG DS+  +    ++   V     +S  +G +     E    + K++   +  
Sbjct: 5  KALALFSGGLDSALAIKVVQEQGIEVIALNFVSHFFGGK----NEKAESMAKQLGIKLEY 60

Query: 67 WKDSLGEDHILPLAILG 83
                   ++   + G
Sbjct: 61 IDFKKRHILVVEDPVYG 77


>gi|206900932|ref|YP_002250055.1| NH(3)-dependent NAD(+) synthetase [Dictyoglomus thermophilum
           H-6-12]
 gi|206740035|gb|ACI19093.1| NH(3)-dependent NAD(+) synthetase [Dictyoglomus thermophilum
           H-6-12]
          Length = 540

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 15/132 (11%), Positives = 29/132 (21%), Gaps = 2/132 (1%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--RLCVRKKIVELMPK 66
             AL+  SGG DSS     A+    +   L      R   +        + K +      
Sbjct: 285 KKALVALSGGIDSSVTACLAVAALGKENVLGIYMPSRYSSKESAIDAEMLAKNLGIEYRV 344

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     +      +       +         N+          + L         +
Sbjct: 345 IPIEKIFSSFIETLNPNNRVFMDNAEENLQARIRGNIIMFISNREGYLVLSTGNKSELAM 404

Query: 127 GITNIVIGVCET 138
           G   +   +   
Sbjct: 405 GYCTLYGDMTGG 416


>gi|167586157|ref|ZP_02378545.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia ubonensis Bu]
          Length = 382

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 45/192 (23%), Gaps = 11/192 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K    ++  SGG DSS       ++   V  L     + +     C         + +
Sbjct: 1   MSKR-RVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQ-----DWI 54

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                +      +            +      +      PN  V     I        A 
Sbjct: 55  DVVSVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAM 114

Query: 125 RLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            LG   I  G                    T         L          PL  + K +
Sbjct: 115 TLGAETIATGHYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTK 174

Query: 180 TWKLAQDIGGQD 191
             ++A  IG  +
Sbjct: 175 VREIAAQIGLPN 186


>gi|192290882|ref|YP_001991487.1| GMP synthase [Rhodopseudomonas palustris TIE-1]
 gi|192284631|gb|ACF01012.1| GMP synthase, large subunit [Rhodopseudomonas palustris TIE-1]
          Length = 565

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 60/185 (32%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DS+       +   D++  +  D+G   K E        K +V+L   
Sbjct: 267 SGKVICGLSGGVDSAVAAVLIHEAIGDQLTCVFVDHGLLRKDEG-------KSVVDLFRH 319

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +       +    LG +   +  +     I    +       R +         A  L
Sbjct: 320 HYNIPLVHVDVSETFLGALKGVTDPEQKRKTIGKLFIDVFEAEARRV-------GGADFL 372

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+    +      TI++      L    ++ +  PL  L K E   L ++
Sbjct: 373 AQGTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRALGRE 430

Query: 187 IGGQD 191
           +G  D
Sbjct: 431 LGLPD 435


>gi|152989329|ref|YP_001347945.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas aeruginosa PA7]
 gi|205816889|sp|A6V4G0|MNMA_PSEA7 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|150964487|gb|ABR86512.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudomonas aeruginosa PA7]
          Length = 375

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 50/195 (25%), Gaps = 12/195 (6%)

Query: 1   MNDI--IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           M++     +    ++  SGG DSS        +  +VE L       +     C    R+
Sbjct: 1   MSESAPTPRRERVIVGMSGGVDSSVSALLLQQQGYQVEGLFMKNWDEDDGTEYC--TARE 58

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
            + +          + H        +   +     +A            +  R  I    
Sbjct: 59  DLADAQAVCDRIGIKLHT--ANFAAEYWDNVFEHFLAEYKAGRTPNPDILCNRE-IKFKA 115

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLM 173
               A  LG   I  G                              +G E       P+ 
Sbjct: 116 FLDYALMLGADLIATGHYVRRRDLDGRTELLKGLDPNKDQSYFLHAVGGEQIARSLFPVG 175

Query: 174 WLKKYETWKLAQDIG 188
            L+K E   +A+  G
Sbjct: 176 ELEKPEVRAIAEKHG 190


>gi|19703898|ref|NP_603460.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
          [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
 gi|19714062|gb|AAL94759.1| putative tRNA (5-methylaminomethyl-2-thiouridylate)
          -methyltransferase [Fusobacterium nucleatum subsp.
          nucleatum ATCC 25586]
          Length = 333

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 7/77 (9%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVET---LSFDYGQRNKVELECRLCVRKKIVELMPK 66
           AL LFSGG DS+  +    ++   V     +S  +G +     E    + K++   +  
Sbjct: 5  KALALFSGGLDSALAIKVVQEQGIEVIALNFVSHFFGGK----NEKAESMAKQLGIRLEY 60

Query: 67 WKDSLGEDHILPLAILG 83
                   ++   + G
Sbjct: 61 IDFKKRHILVVEDPVYG 77


>gi|325479285|gb|EGC82381.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 367

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 47/190 (24%), Gaps = 12/190 (6%)

Query: 5   IKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +K+      ++  SGG DSS       +    V  +             C   V     +
Sbjct: 1   MKEKKDTKVVVGISGGVDSSVAALLLKEEGYDVVGIFMKNWDDTDENGVCTAEV--DYED 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
            +          + +         +  +      + +    PN  +     I        
Sbjct: 59  AVAVSNQIGIPYYSIN---FEKEYYDRVFTYFLDEYKKGRTPNPDIMCNKEIKFKAFLDF 115

Query: 123 AYRLGITNIVIGVCETDYSGYP---DCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKK 177
           A  LG   +  G               R       +T     L  E    V  P+   +K
Sbjct: 116 AKSLGADYVATGHYARADRSNGETVMLRGVDNNKDQTYFLSQLSQEQIKDVLFPVGEFEK 175

Query: 178 YETWKLAQDI 187
            E  ++A   
Sbjct: 176 KEVREIAHKY 185


>gi|319759218|gb|ADV71160.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus suis JS14]
          Length = 419

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 46/189 (24%), Gaps = 11/189 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS       ++   V  +             C     +   ++  
Sbjct: 50  NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGFC--TATEDYKDVAA 107

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    + +            + +    + +    PN  V     I        A  
Sbjct: 108 VADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDYAMN 164

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMWLKKYE 179
           LG   +  G             H    A            L  E       PL  L+K +
Sbjct: 165 LGADYVATGHYAQVTRDEDGTVHMLRGADNGKDQTYFLSQLSQEQLQKTMFPLGHLQKPQ 224

Query: 180 TWKLAQDIG 188
             ++A+  G
Sbjct: 225 VREIAERAG 233


>gi|227494865|ref|ZP_03925181.1| GMP synthase (glutamine-hydrolyzing) [Actinomyces coleocanis DSM
           15436]
 gi|226831317|gb|EEH63700.1| GMP synthase (glutamine-hydrolyzing) [Actinomyces coleocanis DSM
           15436]
          Length = 523

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 56/185 (30%), Gaps = 13/185 (7%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKWK 68
            +   SGG DSS   +       D++  +  D+G  R     +      K +   +    
Sbjct: 221 VICALSGGVDSSVAAALVHKAVGDQLTCIFVDHGLLRAGEREQVEEDYAKGMGIRVITVD 280

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +S           L  ++  S  +     I    + +     R +I  V A     +   
Sbjct: 281 ES--------ERFLTALAGVSEPEEKRKIIGREFIRSFEAAQRRVIEEVGATGAEIK--- 329

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +    +  PL  L K E   + +++G
Sbjct: 330 FLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPEDLKFDLVEPLRTLFKDEVRAIGRELG 389

Query: 189 GQDLV 193
             + +
Sbjct: 390 VPEKI 394


>gi|300871373|ref|YP_003786246.1| thiamine biosynthesis protein [Brachyspira pilosicoli 95/1000]
 gi|300689074|gb|ADK31745.1| thiamine biosynthesis protein [Brachyspira pilosicoli 95/1000]
          Length = 346

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +KKA  A+LL SGG DS    +        V  + F  G
Sbjct: 1  MKKA-KAILLLSGGLDSMLVGAILKRENIDVLAVRFVTG 38


>gi|256092379|ref|XP_002581921.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methy lt ransferase
           [Schistosoma mansoni]
 gi|238668268|emb|CAZ38161.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methy lt
           ransferase,putative [Schistosoma mansoni]
          Length = 313

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 41/133 (30%), Gaps = 6/133 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YG--QRNKVELECRLCVRKKIVELMPK 66
            A++  SGG DSS           +V  ++   YG    +    +   C  + I +    
Sbjct: 20  KAVVAMSGGVDSSVAAVLLHRLGYQVIGVTLQLYGADGNSNTRKKGVCCAGQDIYDAKRV 79

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            + +    +IL      +I    + ++ A        P   +     +       +   L
Sbjct: 80  AEGTGFPHYILN---YEEIFKKEVIESFAQTYIQGKTPIPCIKCNQTVKFRDLLQVTRNL 136

Query: 127 GITNIVIGVCETD 139
           G   ++ G     
Sbjct: 137 GADVLITGHYVRR 149


>gi|205829099|sp|Q5GTC8|MNMA_WOLTR RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 371

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 41/133 (30%), Gaps = 6/133 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YG--QRNKVELECRLCVRKKIVELMPK 66
            A++  SGG DSS           +V  ++   YG    +    +   C  + I +    
Sbjct: 20  KAVVAMSGGVDSSVAAVLLHRLGYQVIGVTLQLYGADGNSNTRKKGVCCAGQDIYDAKRV 79

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            + +    +IL      +I    + ++ A        P   +     +       +   L
Sbjct: 80  AEGTGFPHYILN---YEEIFKKEVIESFAQTYIQGKTPIPCIKCNQTVKFRDLLQVTRNL 136

Query: 127 GITNIVIGVCETD 139
           G   ++ G     
Sbjct: 137 GADVLITGHYVRR 149


>gi|58584415|ref|YP_197988.1| tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Wolbachia endosymbiont strain TRS of Brugia malayi]
 gi|58418731|gb|AAW70746.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase, contain the PP-loop ATPase domain
           [Wolbachia endosymbiont strain TRS of Brugia malayi]
          Length = 385

 Score = 48.4 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 41/133 (30%), Gaps = 6/133 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YG--QRNKVELECRLCVRKKIVELMPK 66
            A++  SGG DSS           +V  ++   YG    +    +   C  + I +    
Sbjct: 34  KAVVAMSGGVDSSVAAVLLHRLGYQVIGVTLQLYGADGNSNTRKKGVCCAGQDIYDAKRV 93

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            + +    +IL      +I    + ++ A        P   +     +       +   L
Sbjct: 94  AEGTGFPHYILN---YEEIFKKEVIESFAQTYIQGKTPIPCIKCNQTVKFRDLLQVTRNL 150

Query: 127 GITNIVIGVCETD 139
           G   ++ G     
Sbjct: 151 GADVLITGHYVRR 163


>gi|302553630|ref|ZP_07305972.1| GMP synthase domain-containing protein [Streptomyces
           viridochromogenes DSM 40736]
 gi|302471248|gb|EFL34341.1| GMP synthase domain-containing protein [Streptomyces
           viridochromogenes DSM 40736]
          Length = 526

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 55/185 (29%), Gaps = 14/185 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+   +        ++  +  D+G   K E E          ++   + 
Sbjct: 226 RAICGLSGGVDSAVAAALVQKAIGSQLTCVYVDHGLMRKGETE----------QVEKDFV 275

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            + G    +  A    +   +   +   K +        V  +    ++     A     
Sbjct: 276 AATGVQLKVVDAEERFLKALAGVSDPEEKRKIIGREFIRVFEQAQAEIIADQGPAVE--- 332

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +    +  PL  L K E   + Q++G
Sbjct: 333 FLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPEDLEFKLIEPLRKLFKDEVRMVGQELG 392

Query: 189 GQDLV 193
             D +
Sbjct: 393 LPDEI 397


>gi|237715861|ref|ZP_04546342.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides sp. D1]
 gi|262407475|ref|ZP_06084023.1| tRNA methyl transferase [Bacteroides sp. 2_1_22]
 gi|294646866|ref|ZP_06724487.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides ovatus SD CC 2a]
 gi|294808901|ref|ZP_06767630.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides xylanisolvens SD CC 1b]
 gi|229443508|gb|EEO49299.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides sp. D1]
 gi|262354283|gb|EEZ03375.1| tRNA methyl transferase [Bacteroides sp. 2_1_22]
 gi|292637811|gb|EFF56208.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides ovatus SD CC 2a]
 gi|294443943|gb|EFG12681.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides xylanisolvens SD CC 1b]
          Length = 355

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 47/181 (25%), Gaps = 7/181 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
            L SGG DSS  +    ++  +        G      ++C     + I       +    
Sbjct: 5   ALLSGGVDSSVVVHLLCEQGYKPTLFYIKIGMDGAEYMDCS--AEEDIELSTATARKYGL 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
              ++ L    +   +     +    Q        +  + I F  F   +      T   
Sbjct: 63  SLEVVDLH--QEYWENVAAYAIDKIRQGLTPNPDVMCNKLIKFGCFEQRVGKDFDFTATG 120

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLAQDIGG 189
                    G            +    L    ++ V     P+  L K E  ++A   G 
Sbjct: 121 HYATTLQRDGKTWLGTAKDPVKDQTDFLAQIDYLQVSKLIFPIGGLMKQEVREIANRAGL 180

Query: 190 Q 190
            
Sbjct: 181 P 181


>gi|325105891|ref|YP_004275545.1| argininosuccinate synthase [Pedobacter saltans DSM 12145]
 gi|324974739|gb|ADY53723.1| argininosuccinate synthase [Pedobacter saltans DSM 12145]
          Length = 398

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 1/66 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               +L FSGG D S  C+  + D    V ++  + G  +  EL+        +     
Sbjct: 1  MKKKVVLAFSGGLDTSFCCIYLSKDLDLEVHSVIVNTGGFSDQELKEIEERAYSLGVASH 60

Query: 66 KWKDSL 71
             D++
Sbjct: 61 HAVDAV 66


>gi|312880532|ref|ZP_07740332.1| N-acetyl sugar amidotransferase [Aminomonas paucivorans DSM 12260]
 gi|310783823|gb|EFQ24221.1| N-acetyl sugar amidotransferase [Aminomonas paucivorans DSM 12260]
          Length = 374

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 60/200 (30%), Gaps = 8/200 (4%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            ++  SGG DSS      +    R   +  D G  +++ ++    +  K+   +      
Sbjct: 69  CVIGLSGGVDSSYVAHLLVRHGVRPLAVHLDNGWNSELAVKNIENLVTKLGIDLITHVVD 128

Query: 71  LGEDHILPLAILGDISHSSLTKNVAM------KIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             E   L LA L   +  S   +         +    +     V GRN            
Sbjct: 129 WEEFRDLQLAFLRASTPDSEIPSDHAIVALLCRTAVKHRIRFMVTGRNYQTESHLPRRWS 188

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV-HTPLMWLKKYETWKL 183
              +    I      + G P      +  ++ ++ L       V    L+   K    + 
Sbjct: 189 SGHLDWKYIRELNRRFGGRPLRTFPHVSVLQLSLWLATGRLEWVDLLNLVDYDKERAIRE 248

Query: 184 AQD-IGGQDLVNLILEESHT 202
            ++ +G +       E  +T
Sbjct: 249 MEETLGWKYYGGKHYESIYT 268


>gi|253699425|ref|YP_003020614.1| GMP synthase [Geobacter sp. M21]
 gi|251774275|gb|ACT16856.1| GMP synthase, large subunit [Geobacter sp. M21]
          Length = 516

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DS+           D++  +  + G   K E         K+V L  K  
Sbjct: 221 KVLCALSGGVDSAVVAVLIHKAIGDQLHCVFVNNGLLRKGE-------ADKVVNLFTKHF 273

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY-RLG 127
                        LG +   S  +               + G   I+L         ++ 
Sbjct: 274 KINLTHVDAADRFLGMLEGISDPEQKRK-----------IIGNEFIYLFEEEAKKLGQVD 322

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    +   S         I++      L  + ++ +  P+  L K E   L +++
Sbjct: 323 YLAQGTLYPDVIESVSTKGPSAVIKSHHNVGGLPEKMNLKLLEPVRELFKDEVRLLGKEL 382

Query: 188 GGQDLV 193
           G  D V
Sbjct: 383 GMPDEV 388


>gi|238019350|ref|ZP_04599776.1| hypothetical protein VEIDISOL_01214 [Veillonella dispar ATCC 17748]
 gi|237864049|gb|EEP65339.1| hypothetical protein VEIDISOL_01214 [Veillonella dispar ATCC 17748]
          Length = 363

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 52/189 (27%), Gaps = 14/189 (7%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                  +  SGG DSS   +  L +  +V  ++              + +   + +   
Sbjct: 10  SMEKVIAVAMSGGVDSSLTAAMLLKQGYKVFGIT--LWLWVSGTPYDSVPLA--VTDAKK 65

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  E H++    +   +            +  N     V     I        A  
Sbjct: 66  MCDFLGIEHHVIDARDVFYDNVVDYFVKEYAYGRTPNPC---VFCNKNIKFDLMLNRALE 122

Query: 126 LGITNIVIGVCETDYSGYPD-----CRHDTIRAIETAINLGMESHV--TVHTPLMWLKKY 178
           LG T++V G                 +       ++ +   M   +   +  PL    K 
Sbjct: 123 LGATHMVTGHYAQVNYNEETGLYELHKGVDPTKDQSYVMYNMNQRILSHLMFPLGGQCKT 182

Query: 179 ETWKLAQDI 187
           ET KLA + 
Sbjct: 183 ETRKLAAEY 191


>gi|210610918|ref|ZP_03288643.1| hypothetical protein CLONEX_00833 [Clostridium nexile DSM 1787]
 gi|210152218|gb|EEA83225.1| hypothetical protein CLONEX_00833 [Clostridium nexile DSM 1787]
          Length = 514

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 48/188 (25%), Gaps = 22/188 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS            ++  +  D+G            +RK   + +    
Sbjct: 217 KVLCALSGGVDSSVAAVMLSKAVGSQLTCVFVDHG-----------LLRKNEGDEVEAIF 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G   +  + +       +  K V                    F+      A ++G 
Sbjct: 266 GPEGNYELNFIRVNAQERFYAKLKGVEDPEAK-------RKIIGEEFIRVFEEEAKKIGA 318

Query: 129 TNIV---IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            + +       +   SG                         +  PL  L K E  K   
Sbjct: 319 VDFLVQGTIYPDIVESGLGGESAVIKSHHNVGGLPDYVDFKEIIEPLRDLFKDEVRKAGL 378

Query: 186 DIGGQDLV 193
           ++G  + +
Sbjct: 379 ELGIPEYL 386


>gi|295395145|ref|ZP_06805353.1| GMP synthase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971907|gb|EFG47774.1| GMP synthase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 526

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/186 (11%), Positives = 51/186 (27%), Gaps = 11/186 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DS+   +       D++  +  D+G   K E +                
Sbjct: 222 KQVICALSGGVDSAVAAALVHKAVGDQLTCVFVDHGLLRKDERKQVEQ---------DYV 272

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +      +  A       + +T     +                  +  +   A  + 
Sbjct: 273 ASTGVRLVTVDAADQFVNELAGVTDPETKRKIIGREFIRVFETAAADLVAQSRNDAEPIE 332

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   +               I++      L  +    +  PL  L K E  ++ +++
Sbjct: 333 -FLVQGTLYPDVVESGGGSGTANIKSHHNVGGLPEDLQFKLVEPLRALFKDEVREIGREL 391

Query: 188 GGQDLV 193
           G  +++
Sbjct: 392 GLPEVI 397


>gi|225011775|ref|ZP_03702213.1| Argininosuccinate synthase [Flavobacteria bacterium MS024-2A]
 gi|225004278|gb|EEG42250.1| Argininosuccinate synthase [Flavobacteria bacterium MS024-2A]
          Length = 396

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/199 (12%), Positives = 56/199 (28%), Gaps = 5/199 (2%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL-MP 65
           K    +L +SGG D+S  L         V  +S + G  ++ E++       ++      
Sbjct: 2   KHSKLVLAYSGGLDTSYSLRKLSKEGYEVHAVSINTGGFSENEIKDIEEKSYQMGAHVYK 61

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    H +   ++      + T  +++  +        V     I   + A  +  
Sbjct: 62  NINALDTFYHKIVKYLIFGNVLRNNTYPLSVSAERIIQAIEIVTYAKAIGAKYIAHGSTG 121

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK--L 183
            G   +   +     +              +  +                 KY   +   
Sbjct: 122 AGNDQVRFDMIFQVMAPEIKIITLIRDNQLSREDEIEYLKTQGIDVPWEKAKYSINQGLW 181

Query: 184 AQDIGGQDLV--NLILEES 200
              +GG + +  +  L +S
Sbjct: 182 GTSVGGSETLTSDQPLPDS 200


>gi|86739358|ref|YP_479758.1| GMP synthase [Frankia sp. CcI3]
 gi|86566220|gb|ABD10029.1| GMP synthase (glutamine-hydrolyzing) [Frankia sp. CcI3]
          Length = 556

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 52/185 (28%), Gaps = 16/185 (8%)

Query: 12  LLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           +   SGG DS+   +       D +  +  D+G               +  E     +D 
Sbjct: 256 ICGLSGGVDSAVAAALVHRAVGDALTCVFVDHG-------------LLRAGEAEQVERDF 302

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI-- 128
           +    +  + +      S+    V    +   +                   A   G   
Sbjct: 303 VATTGVDLVHVKAADRFSAALSGVTDPERKRKIIGREFIRVFEESARELEVRAEAEGATI 362

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G    D           I++      L  +    +  PL  L K E  +L +++G
Sbjct: 363 DFLVQGTLYPDVIESGSPTAAKIKSHHNVGGLPEDLRFDLVEPLRTLFKDEVRRLGEELG 422

Query: 189 GQDLV 193
             + +
Sbjct: 423 LPEEI 427


>gi|83645146|ref|YP_433581.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Hahella chejuensis KCTC 2396]
 gi|123533626|sp|Q2SJL8|MNMA_HAHCH RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|83633189|gb|ABC29156.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Hahella chejuensis KCTC 2396]
          Length = 364

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 50/188 (26%), Gaps = 12/188 (6%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
            +    ++  SGG DSS            VE L       +     C       + +   
Sbjct: 4   HRNQRVIVGISGGVDSSVSAYLLKALGYEVEGLFMKNWDEDDGTEYC--TALSDLEDAQK 61

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  + H    A         + ++   + +    PN  +     I        A  
Sbjct: 62  VCDKLGIKLHT---ASFSAEYWDRVFEHFLDEYRAGRTPNPDILCNKEIKFKAFLDYAQA 118

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM------WLKKYE 179
           LG   I  G     +S + +  +    A  +         V              L K E
Sbjct: 119 LGGDLIATGHYA-QFSRFGEHTYLMKGADPSKEQSYFLHAVPGQALARTLFPVGGLLKKE 177

Query: 180 TWKLAQDI 187
             ++A+++
Sbjct: 178 VRRIAREL 185


>gi|15618905|ref|NP_225191.1| PP-loop superfamily ATPase [Chlamydophila pneumoniae CWL029]
 gi|15836528|ref|NP_301052.1| PP-loop superfamily ATPase [Chlamydophila pneumoniae J138]
 gi|16752030|ref|NP_445396.1| MesJ/Ycf62 family protein [Chlamydophila pneumoniae AR39]
 gi|33242366|ref|NP_877307.1| putative p-loop ATPase [Chlamydophila pneumoniae TW-183]
 gi|61216756|sp|Q9Z6R2|TILS_CHLPN RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
          Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
          Full=tRNA(Ile)-lysidine synthetase
 gi|4377326|gb|AAD19134.1| PP-loop superfamily ATPase [Chlamydophila pneumoniae CWL029]
 gi|7189770|gb|AAF38647.1| MesJ/Ycf62 family protein [Chlamydophila pneumoniae AR39]
 gi|8979370|dbj|BAA99204.1| PP-loop superfamily ATPase [Chlamydophila pneumoniae J138]
 gi|33236877|gb|AAP98964.1| putative p-loop ATPase [Chlamydophila pneumoniae TW-183]
          Length = 319

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 16/45 (35%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
              LL  SGG DS        +R      +  D+G R+    E 
Sbjct: 24 KKRYLLALSGGSDSLFLFYLLKERGVSFTAVHIDHGWRSTSAQEA 68


>gi|329954341|ref|ZP_08295433.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides clarus YIT 12056]
 gi|328527609|gb|EGF54602.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides clarus YIT 12056]
          Length = 365

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 49/177 (27%), Gaps = 7/177 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +L SGG DSS  +    ++  R        G+ +   ++C     + +       +    
Sbjct: 5   VLLSGGVDSSVVVHLLCEQGYRPSLFYIKIGKDDADYMDCS--AEEDLEMASAVARRYGL 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
              ++ L    +   +     +    +        +  + I F  F   +      T   
Sbjct: 63  SLEVVDLH--REYWDNVAAYAIEKVRRGFTPNPDVMCNKLIKFGCFEQQVGKDFDFTATG 120

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLAQD 186
                   +G            +    L    ++ V     PL  L K E   +A  
Sbjct: 121 HYATTVLRNGKTWLGTALDPIKDQTDFLAQIDYLQVSKLMFPLGGLMKREVRDIALK 177


>gi|301063575|ref|ZP_07204092.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [delta proteobacterium NaphS2]
 gi|300442307|gb|EFK06555.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [delta proteobacterium NaphS2]
          Length = 518

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 57/186 (30%), Gaps = 18/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS       +   D +  +  D G   K E        +K+V +  ++
Sbjct: 222 KRVICGLSGGVDSSVTAVLLHEAVGDNLSCILVDNGLLRKDE-------ARKVVAVFQEY 274

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                + H++  +       S +T       ++                      A  L 
Sbjct: 275 --YGIDLHLVDASKHFLDCLSGVTDP-----EEKRKIIGREFINIFEKKAAELGSAQYLA 327

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   V E+     P      I++      L    ++ +  PL  L K E  ++  ++
Sbjct: 328 QGTLYPDVIESVSFKGPSAT---IKSHHNVGGLPEVMNLKLVEPLRELFKDEVREVGIEL 384

Query: 188 GGQDLV 193
           G    +
Sbjct: 385 GLPREL 390


>gi|282877536|ref|ZP_06286354.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Prevotella buccalis ATCC 35310]
 gi|281300360|gb|EFA92711.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Prevotella buccalis ATCC 35310]
          Length = 514

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 59/188 (31%), Gaps = 21/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS C +         +  +  D+G   K E    +   + +      
Sbjct: 213 NDKVILGLSGGVDSSVCATLLNKAIGRNLTCIFVDHGLLRKNEFSNVMKAYEGLG----- 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                       L ++G    +S      +K   +      + GR+ + +  A       
Sbjct: 268 ------------LNVIG--VDASKKFFADLKGVTDPEQKRKIIGRDFVEVFNAEAKKIT- 312

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G    D           I++      L  E H+ +  PL WL K E  ++   
Sbjct: 313 DAKWLAQGTIYPDRIESLSITGMVIKSHHNVGGLPKEMHLQLCEPLQWLFKDEVRRVGYQ 372

Query: 187 IGGQDLVN 194
           +G  + + 
Sbjct: 373 LGMSEHLI 380


>gi|260892778|ref|YP_003238875.1| GMP synthase, large subunit [Ammonifex degensii KC4]
 gi|260864919|gb|ACX52025.1| GMP synthase, large subunit [Ammonifex degensii KC4]
          Length = 510

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 56/187 (29%), Gaps = 21/187 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              AL   SGG DS+           +R+  +  ++G   K E E      + +      
Sbjct: 216 EERALAALSGGVDSTVAAVLVHRAIGNRLTCVFVNHGLLRKGEAESVRAAVQALG----- 270

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     +PL  +   +         +  ++          R              L
Sbjct: 271 ----------VPLVYVDASARFLAQLEGVVDPEEKRRRVGHEFIRVFEEEARKLGKVRFL 320

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+  +         I++      L  E  + +  PL +L K E  +L ++
Sbjct: 321 VQGTLYPDVIESGTALSH-----RIKSHHNVGGLPEEMELELLEPLRYLFKDEVRELGKE 375

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 376 LGLPEEI 382


>gi|221202286|ref|ZP_03575320.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia multivorans CGD2M]
 gi|221209100|ref|ZP_03582094.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia multivorans CGD2]
 gi|221171004|gb|EEE03457.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia multivorans CGD2]
 gi|221177860|gb|EEE10273.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia multivorans CGD2M]
          Length = 381

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 45/192 (23%), Gaps = 11/192 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K    ++  SGG DSS       ++   V  L     + +     C         + +
Sbjct: 1   MSKR-RVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQ-----DWI 54

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                +      +            +      +      PN  V     I        A 
Sbjct: 55  DVVSVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDYAM 114

Query: 125 RLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            LG   I  G                    T         L          PL  + K +
Sbjct: 115 SLGAETIATGHYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTK 174

Query: 180 TWKLAQDIGGQD 191
             ++A  IG  +
Sbjct: 175 VREIAAQIGLPN 186


>gi|206601590|gb|EDZ38073.1| GMP synthase (glutamine-hydrolyzing) [Leptospirillum sp. Group II
           '5-way CG']
          Length = 516

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 49/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           +   SGG DS+           DR +    D G     E      + + + EL       
Sbjct: 223 ICALSGGIDSTVTALLCHKALGDRFQAFYVDNGLMRMGE---SEQIVRDLKELA--LPLK 277

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
             +   + L  L  +      + +  K   +   +  +        +             
Sbjct: 278 PVDAGKIFLDRLKGVKDPERKRKIIGKTFIDVFWSEAMTLPVRPRFLAQG---------- 327

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
                 +   S         I++      L  ++   +  PL  L K E  ++   +G  
Sbjct: 328 --TLYPDVIESISHKGPSSMIKSHHNVGGLPKKNPFQLVEPLRDLFKDEVRRMGLKLGLP 385

Query: 191 D 191
           D
Sbjct: 386 D 386


>gi|329964462|ref|ZP_08301516.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides fluxus YIT 12057]
 gi|328524862|gb|EGF51914.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides fluxus YIT 12057]
          Length = 357

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 45/178 (25%), Gaps = 11/178 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +K     LL  SGG DSS       D    V  ++F                    ++  
Sbjct: 8   MKSKERVLLGMSGGTDSSVAAMRLQDAGYEVTGVTFR---------FYEKDGATNYLDDA 58

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 LG +H+       ++  S + +    +    + P       N +     A +A 
Sbjct: 59  RSLASRLGIEHV--TYDAREMFRSRIIRYFIDEYLAGHTPVPCTLCNNELKWALLAKIAD 116

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
             GI  +  G                    +      +          M L   +  K
Sbjct: 117 EKGIYWVSTGHYVRKVLQGGKYYMAPAVDKDKDQTFFLWGLKQDIMRRMLLPMGDITK 174


>gi|313893420|ref|ZP_07826992.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442061|gb|EFR60481.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Veillonella sp. oral taxon 158 str. F0412]
          Length = 353

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 40/134 (29%), Gaps = 11/134 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV--RKKIVELM 64
                 +  SGG DSS   +  L +  +V  ++           E  L V   KK+ + +
Sbjct: 1   MEKVIAVAMSGGVDSSLTAAMLLKQGYKVFGITLWLWVSGTPYDEVPLAVTDAKKMCDFL 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                   E H++    +   +            +  N     V     I        A 
Sbjct: 61  ------GIEHHVIDARDVFYENVVDYFVKEYAYGRTPNPC---VFCNKNIKFDLMLNRAL 111

Query: 125 RLGITNIVIGVCET 138
            LG T++V G    
Sbjct: 112 ELGATHMVTGHYAQ 125


>gi|307638008|gb|ADN80458.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyl transferase
           [Helicobacter pylori 908]
 gi|325996611|gb|ADZ52016.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
           [Helicobacter pylori 2018]
 gi|325998201|gb|ADZ50409.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
           [Helicobacter pylori 2017]
          Length = 342

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 48/176 (27%), Gaps = 15/176 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS       ++   +  +         ++L          ++   K  +
Sbjct: 2   KIAVLLSGGVDSSYSAYSLKEQGHELVGIY--------LKLHASEKKHDLYIKNAQKACE 53

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG    L +        S++        ++   PN       ++    A   A +LG  
Sbjct: 54  FLGIP--LEVLDFQKDFKSAVYDEFINAYEEGQTPNPCALCNPLMKFGLALKHALKLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            I  G                    T         L  E    +  PL  L K + 
Sbjct: 112 KIATGHYARVKEIDKISYIQEAVDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDI 167


>gi|254457550|ref|ZP_05070978.1| thiamine biosynthesis protein:ExsB [Campylobacterales bacterium
          GD 1]
 gi|207086342|gb|EDZ63626.1| thiamine biosynthesis protein:ExsB [Campylobacterales bacterium
          GD 1]
          Length = 325

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 25/60 (41%), Gaps = 1/60 (1%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL-ECRLCVRKKIVELMPKWK 68
           A+ LFSGG DS+  +   +D+   V  ++   G  +  +  E    +  ++   +    
Sbjct: 2  KAIALFSGGLDSTLAMKLIIDQGIDVLAVNISTGFGSTKDRLEHMQNMCDQVGAELKIID 61


>gi|313896319|ref|ZP_07829872.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312975118|gb|EFR40580.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 519

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 53/187 (28%), Gaps = 21/187 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            AL   SGG DSS             +  +  D+G            +RK   + +    
Sbjct: 223 RALCALSGGVDSSVAAVLLSKAIGKNLTCVFVDHG-----------LLRKNEGDEVEAVF 271

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            S G   +  + I          K V    Q               F+      A+ +G 
Sbjct: 272 GSAGTYDVNFIRINAQERFYEKLKGVTEPEQK-------RKIIGAEFIRVFEEAAHEIGA 324

Query: 129 -TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLAQD 186
              +V G    D       +   I++      L        +  PL  L K E     ++
Sbjct: 325 VDFLVQGTIYPDVIESGLGKSAVIKSHHNVGGLPDHVDFKEIVEPLRLLFKDEVRAAGRE 384

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 385 LGIPDYL 391


>gi|301107608|ref|XP_002902886.1| tRNA-specific 2-thiouridylase mnmA, putative [Phytophthora
           infestans T30-4]
 gi|262098004|gb|EEY56056.1| tRNA-specific 2-thiouridylase mnmA, putative [Phytophthora
           infestans T30-4]
          Length = 416

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 54/181 (29%), Gaps = 10/181 (5%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS        +   V  +       +  E E    V  + V++    +    E 
Sbjct: 1   MSGGVDSSVAALLLKRQGYHVTGVYMKNWDPSDEEGESACPVDSEYVDVQKVCEQLGIEA 60

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
            ++ L        + +        ++   PN  +     I        A ++G   +  G
Sbjct: 61  QMVNLV---QSYWNQVFAPCLAGYEEGLTPNPDILCNREIKFKAFTEFAKQIGADCVATG 117

Query: 135 VCETDYSGYPDCRHDTIRAIETAINLGME-------SHVTVHTPLMWLKKYETWKLAQDI 187
                         +   A + + +           +   V  PL  ++K E  ++A+  
Sbjct: 118 HYAALRPAEKGGPPNLCAAEDESKDQSYFLSSVDGKAFANVLFPLGGMRKTEVRQIAESE 177

Query: 188 G 188
           G
Sbjct: 178 G 178


>gi|256370668|ref|YP_003108493.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Sulcia muelleri SMDSEM]
 gi|256009460|gb|ACU52820.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Candidatus Sulcia muelleri SMDSEM]
          Length = 470

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 44/181 (24%), Gaps = 3/181 (1%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS        +   V  +   Y             +   +V    K  
Sbjct: 2   KRVIVGMSGGVDSSVAALLLKKQGYEVIGIYLKYSNIYNQCTWREDSIDAMLVSQTLKIP 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             + +   +    +    +    K       D    +       +  L+   +     G 
Sbjct: 62  FYIIDISKIYKKKIIKYIYKEYRKGFT-PNPDILCNSKIKFKIFLEKLIDLKSDFIATGH 120

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYETWKLAQD 186
             I   + E     Y           ++     L          PL  L K E  ++A  
Sbjct: 121 YVIKKEIFENGKIYYQIKSGIDQNKDQSYFLCKLNQNQIKKSLFPLGNLTKKEVRQIASK 180

Query: 187 I 187
            
Sbjct: 181 Y 181


>gi|257064368|ref|YP_003144040.1| GMP synthase, glutamine-hydrolyzing, C-terminal domain or B subunit
           [Slackia heliotrinireducens DSM 20476]
 gi|256792021|gb|ACV22691.1| GMP synthase, glutamine-hydrolyzing, C-terminal domain or B subunit
           [Slackia heliotrinireducens DSM 20476]
          Length = 327

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +  +     ++  +  ++G   K E E  + V +  ++    + 
Sbjct: 40  KVLLALSGGVDSSVVAALLIKAIGKQLVCVHVNHGLMRKGESEQVIEVFQNQMDANLIYV 99

Query: 69  D 69
           D
Sbjct: 100 D 100


>gi|255282422|ref|ZP_05346977.1| argininosuccinate synthase [Bryantella formatexigens DSM 14469]
 gi|255267006|gb|EET60211.1| argininosuccinate synthase [Bryantella formatexigens DSM 14469]
          Length = 409

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 60/213 (28%), Gaps = 25/213 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
                +L +SGG D +T L   L       V     + GQ N+++         K+    
Sbjct: 1   MKEKVILAYSGGLD-TTALIPWLKETFDYEVICCCINCGQGNELDGLEERA---KLSGAS 56

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             + + + ++               +    A  + ++         R +I        A 
Sbjct: 57  KLYIEDIIDEFCDDFI---------MPCVKAGAVYEHKYLLGTSMARPVIAKRLVEI-AR 106

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           + G T I  G                  A +  I                  + +  +  
Sbjct: 107 KEGATTICHGATGKGNDQIRFELSIKALAPDLKIVAPWRMTD----VWTMQSREDEIEYC 162

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
           +  G    ++L  + SH+ Y   R+  +    G
Sbjct: 163 RQHG----IDLPFDASHS-YSRDRNLWHISHEG 190


>gi|167764091|ref|ZP_02436218.1| hypothetical protein BACSTE_02474 [Bacteroides stercoris ATCC
           43183]
 gi|167698207|gb|EDS14786.1| hypothetical protein BACSTE_02474 [Bacteroides stercoris ATCC
           43183]
          Length = 350

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 42/186 (22%), Gaps = 10/186 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +K     LL  SGG DSS       +    V  ++F                 + + +  
Sbjct: 1   MKSKERVLLGMSGGTDSSVAAMKLQEAGYEVTGVTFR--------FYEVGGKTEYLEDAR 52

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                   E        L          +  +                   L   A    
Sbjct: 53  ALAGRLGIEHITYDARELFRERIIRYFIDEYLAGHTPVPCTLCNNELKWKLLAEIADEKG 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYETWK 182
              I+             Y           +T    G++  +   +  P+  + K +   
Sbjct: 113 IYWISTGHYVRKLFLEDNYYIAPAVDRDKDQTFFLWGLKQDILQRMLLPMGDMTKEDARA 172

Query: 183 LAQDIG 188
            A + G
Sbjct: 173 YAAERG 178


>gi|329962136|ref|ZP_08300147.1| GMP synthase domain protein [Bacteroides fluxus YIT 12057]
 gi|328530784|gb|EGF57642.1| GMP synthase domain protein [Bacteroides fluxus YIT 12057]
          Length = 517

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 21/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS             +  +  D+G            + +K  E    
Sbjct: 213 NDRVILGLSGGVDSSVAAVLLHRAIGKNLTCIFVDHG------------LLRK-DEFRNV 259

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D       +      +     L      + +        + GR+ I +  A       
Sbjct: 260 MNDYECLGLNVIGVDASEKFFKDLEGVTEPEQKRK------IIGRDFIEVFDAEAHKIT- 312

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G    D     +    TI++      L  E ++ +  PL WL K E  ++ ++
Sbjct: 313 DARWLAQGTIYPDRIESLNITGKTIKSHHNVGGLPEEMNLRLCEPLQWLFKDEVRRVGRE 372

Query: 187 IGGQDLVN 194
           +G  + + 
Sbjct: 373 LGMPEHLI 380


>gi|326692751|ref|ZP_08229756.1| argininosuccinate synthase [Leuconostoc argentinum KCTC 3773]
          Length = 409

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 28/68 (41%), Gaps = 1/68 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             + +L +SGG D+S  + W  ++   V  +  + GQ +  +++       K+      
Sbjct: 1  MTETLVLAYSGGLDTSVAIPWLKEKGYDVIAVVLNVGQ-HGKDMDMIQAKALKVGASQSI 59

Query: 67 WKDSLGED 74
            D+  E 
Sbjct: 60 VIDAQAEF 67


>gi|319944511|ref|ZP_08018782.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lautropia mirabilis ATCC 51599]
 gi|319742224|gb|EFV94640.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lautropia mirabilis ATCC 51599]
          Length = 393

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 45/191 (23%), Gaps = 11/191 (5%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++  SGG DS+       +   +V  L     + +     C         + +     + 
Sbjct: 14  VVGLSGGVDSAVSAWLLKEAGWQVTGLFMKNWEDDDDSEYCSSRQ-----DWLDAASVAD 68

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
                L            +        +    PN  +     I        A  LG   I
Sbjct: 69  VIGIDLEAVNFAADYRERVFSLFLQAYEAGFTPNPDILCNAEIKFKAFLDHALALGAERI 128

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMWLKKYETWKLAQ 185
             G    +  G          A            L          PL  + K E  ++A 
Sbjct: 129 ATGHYAGNRIGPDGLAQLLRGADANKDQSYFLHRLNQYQLSRAVFPLAGITKPEVREIAA 188

Query: 186 DIGGQDLVNLI 196
            IG  +     
Sbjct: 189 RIGLPNATKKD 199


>gi|307720799|ref|YP_003891939.1| argininosuccinate synthase [Sulfurimonas autotrophica DSM 16294]
 gi|306978892|gb|ADN08927.1| argininosuccinate synthase [Sulfurimonas autotrophica DSM 16294]
          Length = 408

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 48/159 (30%), Gaps = 5/159 (3%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + K     +L +SGG D+S  L W  D +   V T + D GQ  ++E   R    +  ++
Sbjct: 1   MKKSVKKVVLAYSGGLDTSVILKWLQDEYKCEVVTFTADLGQGEELEP-ARTKALELGIK 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
               + D L E+ +            +        +   ++    +  R           
Sbjct: 60  PENIFIDDLREEFVKDFVF---PMFRANAIYEGEYLLGTSIARPLIAKRQAEIAKITGAD 116

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
               G T         +          TI A     +L 
Sbjct: 117 GVAHGATGKGNDQVRFEMGYLGQDSTLTIIAPWREWDLN 155


>gi|297526060|ref|YP_003668084.1| GMP synthase, large subunit [Staphylothermus hellenicus DSM 12710]
 gi|297254976|gb|ADI31185.1| GMP synthase, large subunit [Staphylothermus hellenicus DSM 12710]
          Length = 529

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 49/193 (25%), Gaps = 20/193 (10%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
              +K     L+  SGG DS+            R+  +  ++G   + E+E  L   + +
Sbjct: 228 RRKVKPYEKVLVAVSGGVDSTVTALLVKKAVGKRLVPVFVNHGLMREGEVEEVLENLRSL 287

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                    S           L  +      +     I +          R    +    
Sbjct: 288 GINPIYIDASN--------RFLERLKGIRDCEEKRRIIGEEFARIFSDIVRRDKDIK--- 336

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
                                       D I++      L     + V  PL  L K E 
Sbjct: 337 --------WLAQGTTYPDVIESGSTPGSDRIKSHHNVAGLPDWLGLKVLEPLRELYKDEV 388

Query: 181 WKLAQDIGGQDLV 193
            +LA  +G    V
Sbjct: 389 RRLALHLGVPKDV 401


>gi|223041130|ref|ZP_03611385.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter rectus RM3267]
 gi|222877624|gb|EEF12750.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter rectus RM3267]
          Length = 338

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 50/192 (26%), Gaps = 11/192 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DS+      L+    V          +K          + I ++    + 
Sbjct: 2   KILMAMSGGVDSTMGAKMLLEAGYEVVGCYMK---LHKKPGYHE----QNIGKVARACEY 54

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                H++    L D     +        ++   PN        I        A  +G  
Sbjct: 55  LGINYHVID---LQDEFDRYVYTPFVGAYKEGRTPNPCALCNRFIKFGELLKFAKSIGCE 111

Query: 130 NIVIGVCETDYSG-YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
            +  G       G        +         +  E    +  PL    K +  +LA+ + 
Sbjct: 112 KLATGHYIRVQDGLIRVAADPSKDQSYFVAQVPKEIIADMIFPLGDKFKKDIKELAKSLP 171

Query: 189 GQDLVNLILEES 200
                    E S
Sbjct: 172 SFREYGEQAESS 183


>gi|256005388|ref|ZP_05430352.1| GMP synthase, large subunit [Clostridium thermocellum DSM 2360]
 gi|281417096|ref|ZP_06248116.1| GMP synthase, large subunit [Clostridium thermocellum JW20]
 gi|255990614|gb|EEU00732.1| GMP synthase, large subunit [Clostridium thermocellum DSM 2360]
 gi|281408498|gb|EFB38756.1| GMP synthase, large subunit [Clostridium thermocellum JW20]
 gi|316940865|gb|ADU74899.1| GMP synthase, large subunit [Clostridium thermocellum DSM 1313]
          Length = 511

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 53/186 (28%), Gaps = 23/186 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS            ++  +  D+G   K E +    V KK        
Sbjct: 216 KKVLCALSGGVDSSVAAVLVHKAVGKQLTCIFVDHGLLRKYEGDQVEEVFKK-------- 267

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      ++++   +     + +                    F+      A ++G
Sbjct: 268 --------QFDISLIRVNAEDRFLEKLKGVTDPERKRKII----GEEFIRVFEEEAKKIG 315

Query: 128 -ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLAQ 185
            +  +V G    D           I++      L        +  PL  L K E  K+  
Sbjct: 316 TVDFLVQGTIYPDVIESGVGDAAVIKSHHNVGGLPDYIDFKEIIEPLRSLFKDEVRKVGI 375

Query: 186 DIGGQD 191
           ++G  +
Sbjct: 376 ELGIPE 381


>gi|170077976|ref|YP_001734614.1| GMP synthase [Synechococcus sp. PCC 7002]
 gi|226739757|sp|B1XLR5|GUAA_SYNP2 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|169885645|gb|ACA99358.1| GMP synthetase [Synechococcus sp. PCC 7002]
          Length = 540

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 53/190 (27%), Gaps = 19/190 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSST          D++  +  D G   K E E  + +            
Sbjct: 238 RVLLALSGGVDSSTLAFLLHQAIGDQLTCMFIDQGFMRKGEPERLVEIFD---------- 287

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E   +P+A +                ++                         L  
Sbjct: 288 ----EQFHIPVAYINARDRFIDKLKGVTDPEEKRRLIGHEFIAVFEEESKRLGPFDYLAQ 343

Query: 129 TNIVIGVCETDYSGYPDCRHDT----IRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             +   V E+  +       +     I++      L  +    +  PL  L K E  K+A
Sbjct: 344 GTLYPDVIESADTNVDPKTGERVAVKIKSHHNVGGLPEDLRFKLVEPLRKLFKDEVRKVA 403

Query: 185 QDIGGQDLVN 194
             IG  + + 
Sbjct: 404 ASIGLPEEII 413


>gi|125972896|ref|YP_001036806.1| GMP synthase [Clostridium thermocellum ATCC 27405]
 gi|259647675|sp|A3DCD4|GUAA_CLOTH RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|125713121|gb|ABN51613.1| GMP synthase (glutamine-hydrolyzing) [Clostridium thermocellum ATCC
           27405]
          Length = 511

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 53/186 (28%), Gaps = 23/186 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS            ++  +  D+G   K E +    V KK        
Sbjct: 216 KKVLCALSGGVDSSVAAVLVHKAVGKQLTCIFVDHGLLRKYEGDQVEEVFKK-------- 267

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      ++++   +     + +                    F+      A ++G
Sbjct: 268 --------QFDISLIRVNAEDRFLEKLKGVTDPERKRKII----GEEFIRVFEEEAKKIG 315

Query: 128 -ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLAQ 185
            +  +V G    D           I++      L        +  PL  L K E  K+  
Sbjct: 316 TVDFLVQGTIYPDVIESGVGDAAVIKSHHNVGGLPDYIDFKEIIEPLRSLFKDEVRKVGI 375

Query: 186 DIGGQD 191
           ++G  +
Sbjct: 376 ELGIPE 381


>gi|329962376|ref|ZP_08300380.1| tRNA(Ile)-lysidine synthetase [Bacteroides fluxus YIT 12057]
 gi|328530099|gb|EGF56984.1| tRNA(Ile)-lysidine synthetase [Bacteroides fluxus YIT 12057]
          Length = 423

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 19/65 (29%), Gaps = 1/65 (1%)

Query: 2  NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
          N +       L+  SGG DS   L   L      E    ++  R   E +      + + 
Sbjct: 13 NRLFSPEEKILVALSGGADSVALLHLLLSAGYTCEAAHCNFHLR-DAESDRDEAFVRNLC 71

Query: 62 ELMPK 66
               
Sbjct: 72 NARHV 76


>gi|288870927|ref|ZP_06115784.2| GMP synthase [Clostridium hathewayi DSM 13479]
 gi|288865377|gb|EFC97675.1| GMP synthase [Clostridium hathewayi DSM 13479]
          Length = 521

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 46/189 (24%), Gaps = 21/189 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   L   SGG DSS            ++  +  D+G            +RK   + +  
Sbjct: 223 SGKVLCALSGGVDSSVAAVMLAKAVGKQLTCVFVDHG-----------LLRKDEGDEVEA 271

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G   +  + +          K      Q               F+      A ++
Sbjct: 272 VFGPNGPYDLNFIRVNAQERFYEKLKGAEEPEQK-------RKIIGEEFIRVFEDEAKKI 324

Query: 127 GITNIVI--GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           G  +  +   +                                +  PL  L K E  K  
Sbjct: 325 GAVDYFVQGTIYPDVIESGLGKSAVIKSHHNVGGLPEHVDFKEIIEPLRLLFKDEVRKAG 384

Query: 185 QDIGGQDLV 193
            ++G  + +
Sbjct: 385 LELGIPEYL 393


>gi|256831890|ref|YP_003160617.1| GMP synthase, large subunit [Jonesia denitrificans DSM 20603]
 gi|256685421|gb|ACV08314.1| GMP synthase, large subunit [Jonesia denitrificans DSM 20603]
          Length = 534

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 54/187 (28%), Gaps = 11/187 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DSS   +       D++  +  D+G   + E E          ++   
Sbjct: 229 SDQVICGLSGGVDSSVAAALVQRAIGDQLTCVFVDHGLLREGEAE----------QVEVD 278

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  S G    +  A    ++  +   +   K +                +V  A      
Sbjct: 279 FVQSTGVHLKVIDAREQFLNALAGVTDPETKRKIIGREFIRAFEGAAREIVADAGDKDGD 338

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +               I++      L  +    +  PL  L K E   +  +
Sbjct: 339 VKWLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPDDLQFQLIEPLRTLFKDEVRAVGVE 398

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 399 LGVPDEI 405


>gi|269797937|ref|YP_003311837.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Veillonella parvula DSM 2008]
 gi|282850166|ref|ZP_06259545.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Veillonella parvula ATCC 17745]
 gi|269094566|gb|ACZ24557.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Veillonella parvula DSM 2008]
 gi|282579659|gb|EFB85063.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Veillonella parvula ATCC 17745]
          Length = 353

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 56/190 (29%), Gaps = 18/190 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV--RKKIVELM 64
                 +  SGG DSS   +  L +  +V  ++           E  L V   KK+ + +
Sbjct: 1   MEKVIAVAMSGGVDSSLTAAMLLKQGYKVFGITLWLWVSGTPYDEVPLAVTDAKKMCDFL 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                   E H++    +   +            +  N     V     I        A 
Sbjct: 61  ------GIEHHVIDARDVFYENVVDYFVKEYAYGRTPNPC---VFCNKNIKFDLMLNRAL 111

Query: 125 RLGITNIVIGVCETDYSGYPD-----CRHDTIRAIETAINLGMESHV--TVHTPLMWLKK 177
            LG T++V G                 +       ++ +   M   +   +  PL    K
Sbjct: 112 ELGATHMVTGHYAQVNYNEETGLYELHKGVDPTKDQSYVMYNMNQRILSHLMFPLGGQCK 171

Query: 178 YETWKLAQDI 187
            ET KLA + 
Sbjct: 172 TETRKLAAEY 181


>gi|220904367|ref|YP_002479679.1| argininosuccinate synthase [Desulfovibrio desulfuricans subsp.
          desulfuricans str. ATCC 27774]
 gi|219868666|gb|ACL49001.1| Argininosuccinate synthase [Desulfovibrio desulfuricans subsp.
          desulfuricans str. ATCC 27774]
          Length = 401

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQ 44
          ++     +L +SGG D+S  L W ++ +   V  ++ D GQ
Sbjct: 1  MQDIKKVVLAYSGGLDTSVILKWLIETYKCEVIAVTADLGQ 41


>gi|254468139|ref|ZP_05081545.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [beta
           proteobacterium KB13]
 gi|207086949|gb|EDZ64232.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [beta
           proteobacterium KB13]
          Length = 364

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/131 (12%), Positives = 41/131 (31%), Gaps = 5/131 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  + ++  SGG DS+        +   V  L     + +  +  C     + +++ +  
Sbjct: 2   KKKNIIVGLSGGVDSAVTAHILKQQGHNVRGLFMKNWEADDDDEYCSSK--QDLIDAISV 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +    +  ++            +       ++    PN  +   + I        A +L
Sbjct: 60  AEKIGIDIEVVN---FAKEYKEKVFNLFIDGLKKGFTPNPDILCNSEIKFEAFLNHAMQL 116

Query: 127 GITNIVIGVCE 137
           G  +I  G   
Sbjct: 117 GADHIATGHYA 127


>gi|167895830|ref|ZP_02483232.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei 7894]
          Length = 339

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 42/189 (22%), Gaps = 10/189 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS       ++   V  L     + +     C         + +   
Sbjct: 3   KRRVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQ-----DWIDVV 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +      +            +      +      PN  V     I        A  LG
Sbjct: 58  SVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLG 117

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G                    T         L          PL  + K    +
Sbjct: 118 AQTIATGHYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTRVRE 177

Query: 183 LAQDIGGQD 191
           +A  IG  +
Sbjct: 178 IAAQIGLPN 186


>gi|167847243|ref|ZP_02472751.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei B7210]
          Length = 373

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 42/189 (22%), Gaps = 10/189 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS       ++   V  L     + +     C         + +   
Sbjct: 3   KRRVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQ-----DWIDVV 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +      +            +      +      PN  V     I        A  LG
Sbjct: 58  SVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLG 117

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G                    T         L          PL  + K    +
Sbjct: 118 AQTIATGHYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTRVRE 177

Query: 183 LAQDIGGQD 191
           +A  IG  +
Sbjct: 178 IAAQIGLPN 186


>gi|114686943|ref|XP_001137340.1| PREDICTED: tRNA 5-methylaminomethyl-2-thiouridylate
           methyltransferase 1 isoform 1 [Pan troglodytes]
          Length = 390

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/113 (11%), Positives = 29/113 (25%), Gaps = 9/113 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--------QRNKVELECRLCV 56
           ++     +   SGG DS+        R  +V  +                  + E    V
Sbjct: 1   MQAVRHVVCALSGGVDSAVAALLLRRRGYQVTGVFMKNWDSLDEHGVCTADKDCEDAYRV 60

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
            + +     +    + E      +   +      T N  +    +   + F  
Sbjct: 61  CQILDIPFHQVS-YVKEYWNDVFSDFLNEYEKGRTPNPDIVCNKHIKFSCFFH 112


>gi|76810425|ref|YP_334767.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia pseudomallei
           1710b]
 gi|126451955|ref|YP_001067626.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei 1106a]
 gi|242317503|ref|ZP_04816519.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei 1106b]
 gi|254191526|ref|ZP_04898029.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei Pasteur 52237]
 gi|254194966|ref|ZP_04901396.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei S13]
 gi|254261623|ref|ZP_04952677.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei 1710a]
 gi|254299216|ref|ZP_04966666.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei 406e]
 gi|123598034|sp|Q3JNT6|MNMA_BURP1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205811476|sp|A3NZ55|MNMA_BURP0 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|76579878|gb|ABA49353.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei 1710b]
 gi|126225597|gb|ABN89137.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei 1106a]
 gi|157808903|gb|EDO86073.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei 406e]
 gi|157939197|gb|EDO94867.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei Pasteur 52237]
 gi|169651715|gb|EDS84408.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei S13]
 gi|242140742|gb|EES27144.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei 1106b]
 gi|254220312|gb|EET09696.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei 1710a]
          Length = 383

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 42/189 (22%), Gaps = 10/189 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS       ++   V  L     + +     C         + +   
Sbjct: 3   KRRVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQ-----DWIDVV 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +      +            +      +      PN  V     I        A  LG
Sbjct: 58  SVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLG 117

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G                    T         L          PL  + K    +
Sbjct: 118 AQTIATGHYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTRVRE 177

Query: 183 LAQDIGGQD 191
           +A  IG  +
Sbjct: 178 IAAQIGLPN 186


>gi|167920433|ref|ZP_02507524.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei BCC215]
 gi|237813753|ref|YP_002898204.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei MSHR346]
 gi|254180696|ref|ZP_04887294.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei 1655]
 gi|184211235|gb|EDU08278.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei 1655]
 gi|237503455|gb|ACQ95773.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei MSHR346]
          Length = 383

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 42/189 (22%), Gaps = 10/189 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS       ++   V  L     + +     C         + +   
Sbjct: 3   KRRVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQ-----DWIDVV 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +      +            +      +      PN  V     I        A  LG
Sbjct: 58  SVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLG 117

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G                    T         L          PL  + K    +
Sbjct: 118 AQTIATGHYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTRVRE 177

Query: 183 LAQDIGGQD 191
           +A  IG  +
Sbjct: 178 IAAQIGLPN 186


>gi|53726189|ref|YP_103922.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia mallei ATCC 23344]
 gi|67642326|ref|ZP_00441084.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia mallei GB8 horse 4]
 gi|121599684|ref|YP_991629.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia mallei SAVP1]
 gi|124385119|ref|YP_001027125.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia mallei NCTC 10229]
 gi|126448036|ref|YP_001082070.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia mallei NCTC 10247]
 gi|167000516|ref|ZP_02266328.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia mallei PRL-20]
 gi|254178980|ref|ZP_04885634.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia mallei ATCC 10399]
 gi|254202634|ref|ZP_04908997.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia mallei FMH]
 gi|254207974|ref|ZP_04914324.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia mallei JHU]
 gi|254355888|ref|ZP_04972166.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia mallei 2002721280]
 gi|81604334|sp|Q62H98|MNMA_BURMA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205811421|sp|A3MP84|MNMA_BURM7 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205811429|sp|A2S5A6|MNMA_BURM9 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205811467|sp|A1V076|MNMA_BURMS RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|52429612|gb|AAU50205.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia mallei ATCC 23344]
 gi|121228494|gb|ABM51012.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia mallei SAVP1]
 gi|124293139|gb|ABN02408.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia mallei NCTC 10229]
 gi|126240906|gb|ABO03999.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia mallei NCTC 10247]
 gi|147746881|gb|EDK53958.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia mallei FMH]
 gi|147751868|gb|EDK58935.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia mallei JHU]
 gi|148024863|gb|EDK83041.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia mallei 2002721280]
 gi|160694894|gb|EDP84902.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia mallei ATCC 10399]
 gi|238523456|gb|EEP86894.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia mallei GB8 horse 4]
 gi|243063570|gb|EES45756.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia mallei PRL-20]
          Length = 383

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 42/189 (22%), Gaps = 10/189 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS       ++   V  L     + +     C         + +   
Sbjct: 3   KRRVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQ-----DWIDVV 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +      +            +      +      PN  V     I        A  LG
Sbjct: 58  SVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLG 117

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G                    T         L          PL  + K    +
Sbjct: 118 AQTIATGHYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTRVRE 177

Query: 183 LAQDIGGQD 191
           +A  IG  +
Sbjct: 178 IAAQIGLPN 186


>gi|53720497|ref|YP_109483.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia pseudomallei
           K96243]
 gi|126440060|ref|YP_001060365.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia pseudomallei 668]
 gi|167817350|ref|ZP_02449030.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei 91]
 gi|167904220|ref|ZP_02491425.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei NCTC 13177]
 gi|217421190|ref|ZP_03452695.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei 576]
 gi|81379110|sp|Q63QY5|MNMA_BURPS RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205813851|sp|A3NDE4|MNMA_BURP6 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|52210911|emb|CAH36899.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei K96243]
 gi|126219553|gb|ABN83059.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei 668]
 gi|217396602|gb|EEC36619.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei 576]
          Length = 383

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 42/189 (22%), Gaps = 10/189 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS       ++   V  L     + +     C         + +   
Sbjct: 3   KRRVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQ-----DWIDVV 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +      +            +      +      PN  V     I        A  LG
Sbjct: 58  SVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLG 117

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G                    T         L          PL  + K    +
Sbjct: 118 AQTIATGHYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTRVRE 177

Query: 183 LAQDIGGQD 191
           +A  IG  +
Sbjct: 178 IAAQIGLPN 186


>gi|319945029|ref|ZP_08019291.1| argininosuccinate synthase [Lautropia mirabilis ATCC 51599]
 gi|319741599|gb|EFV94024.1| argininosuccinate synthase [Lautropia mirabilis ATCC 51599]
          Length = 443

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 17 IAFSGGLDTSAALHWMRKKGAVPYAYTANLGQPDENDYDEIPRKALRYGAEAARLVD 73


>gi|291556233|emb|CBL33350.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Eubacterium siraeum V10Sc8a]
          Length = 358

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 49/191 (25%), Gaps = 11/191 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               A+ + SGG DSS  L    D+   V   +         +          I +    
Sbjct: 1   MEKLAIAM-SGGVDSSVALVLLKDK-YDVSGYTLKLHDSRGTDDSGLCGSASDIEDAKAI 58

Query: 67  WKDSLGEDHILPLA---------ILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
                   ++L +             +   S  T N  ++  +       +       + 
Sbjct: 59  AAKFGVPHYLLDMRELFSKTVQKSFTESYLSGRTPNPCVECNETIKFGALLDAVKKQGIN 118

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
             AT  Y     +   G      +   D   +          L  +       PL  + K
Sbjct: 119 HIATGHYVRSCYDEKSGRWLLKKAINADGTSNAKDQSYVLYRLSQQQLAASVFPLGEMTK 178

Query: 178 YETWKLAQDIG 188
            E   +A D G
Sbjct: 179 DEIRHIAADSG 189


>gi|257470331|ref|ZP_05634422.1| GMP synthase [Fusobacterium ulcerans ATCC 49185]
 gi|317064541|ref|ZP_07929026.1| bifunctional GMP synthase/glutamine amidotransferase [Fusobacterium
           ulcerans ATCC 49185]
 gi|313690217|gb|EFS27052.1| bifunctional GMP synthase/glutamine amidotransferase [Fusobacterium
           ulcerans ATCC 49185]
          Length = 512

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 56/184 (30%), Gaps = 18/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +       D++  +  D G    +  +    V +   E     
Sbjct: 216 KKVLLGLSGGVDSSVAATLIHKAIGDQLTCIFVDTG---LLRKDEAKKVMEIYGENFHMN 272

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +    LA L  +S     + +  K              ++ FL         + 
Sbjct: 273 IKCVDAEDRF-LAKLAGVSDPETKRKIIGKEFIEVFDEEAKKLEDVEFLAQGTIYPDVIE 331

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             ++                  TI++      L  +    +  PL  L K E  K+ +++
Sbjct: 332 SMSV-------------KGPSMTIKSHHNVGGLPEDMKFKLLEPLRELFKDEVRKVGREL 378

Query: 188 GGQD 191
           G  D
Sbjct: 379 GIPD 382


>gi|206902001|ref|YP_002251471.1| hypothetical protein DICTH_1659 [Dictyoglomus thermophilum
          H-6-12]
 gi|206741104|gb|ACI20162.1| conserved hypothetical protein [Dictyoglomus thermophilum H-6-12]
          Length = 268

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 1/70 (1%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
          + + +K+    ++ +SGG DS+  L  A D   + V  ++       K E+E      KK
Sbjct: 8  LKNFLKECQKVIVAYSGGVDSTFLLKIAKDTLGENVLAVTLVSPIFPKKEIEEAKEFAKK 67

Query: 60 IVELMPKWKD 69
          +        +
Sbjct: 68 LKVQHIIINN 77


>gi|39935272|ref|NP_947548.1| GMP synthase [Rhodopseudomonas palustris CGA009]
 gi|44887926|sp|P60501|GUAA_RHOPA RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|39649124|emb|CAE27644.1| GMP synthetase [Rhodopseudomonas palustris CGA009]
          Length = 540

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 59/183 (32%), Gaps = 17/183 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+       +   D++  +  D+G   K E        K +V+L     
Sbjct: 244 KVICGLSGGVDSAVAAVLIHEAIGDQLTCVFVDHGLLRKDEG-------KSVVDLFRHHY 296

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +       +    LG +   +  +     I    +       R +         A  L  
Sbjct: 297 NIPLVHVDVSETFLGALKGVTDPEQKRKTIGKLFIDVFEAEARRV-------GGADFLAQ 349

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+    +      TI++      L    ++ +  PL  L K E   L +++G
Sbjct: 350 GTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRALGRELG 407

Query: 189 GQD 191
             D
Sbjct: 408 LPD 410


>gi|30172869|sp|Q8GDU2|ASSY_HELMO RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|27262410|gb|AAN87486.1| Argininosuccinate synthase [Heliobacillus mobilis]
          Length = 408

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCV 56
          M   +  +   +L +SGG D+S  + W  +     V  ++ D GQ  ++E      +
Sbjct: 1  MKGALGMSKKVVLAYSGGLDTSIIIPWLKENYGYEVIAMAADLGQGEELEPLNEKAI 57


>gi|261881270|ref|ZP_06007697.1| GMP synthase [Prevotella bergensis DSM 17361]
 gi|270331979|gb|EFA42765.1| GMP synthase [Prevotella bergensis DSM 17361]
          Length = 514

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 52/188 (27%), Gaps = 21/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS C           +  +  D+G            + +K  E    
Sbjct: 213 NDRVILGLSGGVDSSVCAVLLNRAIGKNLTCIFVDHG------------LLRK-NEFNKV 259

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G    +      +     L      + +   + + FV         F A      
Sbjct: 260 MNAYQGLGLNVIGVDASNKFFKDLEGVSDPEQKRKIIGHDFVEV-------FNAEAKKIT 312

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G    D           I++      L  +  + +  PL WL K E  ++  +
Sbjct: 313 NAKWLAQGTIYPDRIESLSITGMVIKSHHNVGGLPKDMQLQLCEPLKWLFKDEVRRVGHE 372

Query: 187 IGGQDLVN 194
           +   + + 
Sbjct: 373 LEMPERLI 380


>gi|255008091|ref|ZP_05280217.1| tRNA-specific 2-thiouridylase MnmA [Bacteroides fragilis 3_1_12]
 gi|313145808|ref|ZP_07808001.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides fragilis 3_1_12]
 gi|313134575|gb|EFR51935.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides fragilis 3_1_12]
          Length = 353

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 49/181 (27%), Gaps = 7/181 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
            L SGG DSS  +    ++  +        G      ++C     + I       +    
Sbjct: 5   ALLSGGVDSSVVVHLLCEQGYKPTLFYIKIGMDGAEYMDCS--AEEDIELSTAIARRYGL 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           E  ++ L    +   +     +    +        +  + I F  F   +     +T   
Sbjct: 63  ELEVVDLH--REYWDNVAAYAIEKIRKGQTPNPDVMCNKLIKFGCFEQQVGKDFDLTATG 120

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLAQDIGG 189
                                 +    L    ++ V     P+  L K+E  ++A   G 
Sbjct: 121 HYATTLQLGEKTWLGTAKDPIKDQTDFLAQIDYLQVSKLLFPIGGLMKHEVREIALKAGL 180

Query: 190 Q 190
            
Sbjct: 181 P 181


>gi|242279257|ref|YP_002991386.1| argininosuccinate synthase [Desulfovibrio salexigens DSM 2638]
 gi|242122151|gb|ACS79847.1| argininosuccinate synthase [Desulfovibrio salexigens DSM 2638]
          Length = 411

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI-VE 62
           + K    +L +SGG D+S  L W    +   V TL+ D GQ  +++      ++      
Sbjct: 1   MSKIEKVVLAYSGGLDTSIILKWIKQEYNCEVITLTADLGQGEELDGIEEKALKTGATKA 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
            +   ++    D I P    G I         ++           +  R +         
Sbjct: 61  FVEDLREEFARDFIFPAFRAGAIYEGRYLLGTSIARP-------LIAKRMVEIAEMEGAQ 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         +  G          A     +L
Sbjct: 114 ALAHGATGKGNDQVRFELGGMGMNPRLKHIAPWREWDL 151


>gi|116629824|ref|YP_814996.1| tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase,
           PP-loop ATPase [Lactobacillus gasseri ATCC 33323]
 gi|116095406|gb|ABJ60558.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus gasseri ATCC 33323]
          Length = 383

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 48/185 (25%), Gaps = 11/185 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS        +   V  +             C     +   ++     +
Sbjct: 16  RVVVGMSGGVDSSVSALLLKQQGFDVVGVFMKNWDDTDDSGVC--TATEDYEDVKKVADE 73

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                + +            + +    + +    PN  V     I        A  L   
Sbjct: 74  IGIPYYSIN---FEKDYWERVFEYFLNEYKKGRTPNPDVMCNKEIKFKSFLDFAMDLDAD 130

Query: 130 NIVIGVCE----TDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYETWKL 183
            I +G        +       R       +T     L  +    V  PL  L K +  ++
Sbjct: 131 YIAMGHYAATKVDENGIVHMMRPKDGNKDQTYFLSQLSQDQLKKVIFPLANLTKPQVREI 190

Query: 184 AQDIG 188
           A D G
Sbjct: 191 AIDAG 195


>gi|282851667|ref|ZP_06261032.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus gasseri 224-1]
 gi|311110534|ref|ZP_07711931.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus gasseri MV-22]
 gi|205822450|sp|Q042R4|MNMA_LACGA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|282557635|gb|EFB63232.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus gasseri 224-1]
 gi|311065688|gb|EFQ46028.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus gasseri MV-22]
          Length = 375

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 48/185 (25%), Gaps = 11/185 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS        +   V  +             C     +   ++     +
Sbjct: 8   RVVVGMSGGVDSSVSALLLKQQGFDVVGVFMKNWDDTDDSGVC--TATEDYEDVKKVADE 65

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                + +            + +    + +    PN  V     I        A  L   
Sbjct: 66  IGIPYYSIN---FEKDYWERVFEYFLNEYKKGRTPNPDVMCNKEIKFKSFLDFAMDLDAD 122

Query: 130 NIVIGVCE----TDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYETWKL 183
            I +G        +       R       +T     L  +    V  PL  L K +  ++
Sbjct: 123 YIAMGHYAATKVDENGIVHMMRPKDGNKDQTYFLSQLSQDQLKKVIFPLANLTKPQVREI 182

Query: 184 AQDIG 188
           A D G
Sbjct: 183 AIDAG 187


>gi|56708687|ref|YP_170583.1| tRNA-specific 2-thiouridylase MnmA [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110671159|ref|YP_667716.1| tRNA-specific 2-thiouridylase MnmA [Francisella tularensis subsp.
           tularensis FSC198]
 gi|254875562|ref|ZP_05248272.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Francisella tularensis subsp. tularensis MA00-2987]
 gi|56605179|emb|CAG46310.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Francisella tularensis subsp. tularensis SCHU S4]
 gi|110321492|emb|CAL09693.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Francisella tularensis subsp. tularensis FSC198]
 gi|254841561|gb|EET19997.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Francisella tularensis subsp. tularensis MA00-2987]
          Length = 381

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 39/135 (28%), Gaps = 5/135 (3%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +I +    ++  SGG DSS        +   V  +     + +  +  C     + I + 
Sbjct: 21  VIMENKKVIVGISGGVDSSVSALLLKQQGYDVTGVFMKNWEEDDTDEFCS--AEQDIADA 78

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                        +           ++ ++  ++ +    PN  +     I      +  
Sbjct: 79  QAVCDSIGIPFKKIN---FAAEYWDNVFEHFLIEYKAGRTPNPDILCNKEIKFKAFLSYV 135

Query: 124 YRLGITNIVIGVCET 138
           + LG   I  G    
Sbjct: 136 HLLGGDYIATGHYAQ 150


>gi|315185780|gb|EFU19546.1| GMP synthase (glutamine-hydrolyzing) [Spirochaeta thermophila DSM
           6578]
          Length = 517

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 51/184 (27%), Gaps = 13/184 (7%)

Query: 12  LLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           LLL SGG DS+   +  L  F  ++V  L  D G   K E E      + +         
Sbjct: 217 LLLISGGVDSTVVAALLLKTFPPEQVHLLYIDTGLMRKNETEEVEANLRTLGAS----NL 272

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +       L+ L  +      + +   +            R       A    Y     
Sbjct: 273 YIVHAEERFLSALKGVVDPEKKRQIIGDVFIQVQEEELRRRRIPDQAFLAQGTLYT---- 328

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                +      G       +   + + +         V  PL  L K E  +L   +G 
Sbjct: 329 ---DLIESGKGVGNKAKVIKSHHNVRSPLIERKRKEGRVIEPLSMLYKDEVRRLGAHLGV 385

Query: 190 QDLV 193
              V
Sbjct: 386 PREV 389


>gi|307718690|ref|YP_003874222.1| GMP synthase [Spirochaeta thermophila DSM 6192]
 gi|306532415|gb|ADN01949.1| GMP synthase [Spirochaeta thermophila DSM 6192]
          Length = 517

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 51/184 (27%), Gaps = 13/184 (7%)

Query: 12  LLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           LLL SGG DS+   +  L  F  ++V  L  D G   K E E      + +         
Sbjct: 217 LLLISGGVDSTVVAALLLKTFPPEQVHLLYIDTGLMRKNETEEVEANLRTLGAS----NL 272

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +       L+ L  +      + +   +            R       A    Y     
Sbjct: 273 YIVHAEERFLSALKGVVDPEKKRQIIGDVFIQVQEEELRRRRIPDQAFLAQGTLYT---- 328

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                +      G       +   + + +         V  PL  L K E  +L   +G 
Sbjct: 329 ---DLIESGKGVGNKAKVIKSHHNVRSPLIERKRKEGRVIEPLSMLYKDEVRRLGAHLGV 385

Query: 190 QDLV 193
              V
Sbjct: 386 PREV 389


>gi|159906142|ref|YP_001549804.1| GMP synthase subunit B [Methanococcus maripaludis C6]
 gi|159887635|gb|ABX02572.1| GMP synthase, large subunit [Methanococcus maripaludis C6]
          Length = 310

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 56/188 (29%), Gaps = 26/188 (13%)

Query: 7   KAPSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                ++  SGG DS+     A     D++  +  D G   K E E    + K+ + L  
Sbjct: 20  NNRKTIIALSGGVDSAVAAVLADKAIGDKLLAVYVDTGLMRKNESEEIWKIFKEQMGL-- 77

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                + E   + L  L  +      + +                   +F+     +A  
Sbjct: 78  --NLKIVEAKDIFLKELEGVIDPEEKRKIIG----------------RLFIEVFEKVAEE 119

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G   +V G              +        I L     + V  PL  L K E   LA 
Sbjct: 120 QGEEVLVQGTIA-----PDWIESEGQIKTHHNIALPGGMVLDVVEPLRELYKDEVRLLAV 174

Query: 186 DIGGQDLV 193
            +G  D +
Sbjct: 175 ALGLPDQI 182


>gi|254375237|ref|ZP_04990717.1| hypothetical protein FTDG_01428 [Francisella novicida GA99-3548]
 gi|151572955|gb|EDN38609.1| hypothetical protein FTDG_01428 [Francisella novicida GA99-3548]
          Length = 359

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 48/175 (27%), Gaps = 13/175 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--------RLCVRK 58
           +    ++  SGG DSS        +   V  +     + +  +  C           V  
Sbjct: 2   ENKKVIVGISGGVDSSVSALLLKQQGYDVTGVFMKNWEEDDTDEFCSAEQDIADAQAVCD 61

Query: 59  KIVELMPKWK-----DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
            I     K            +H L     G   +  +  N  +K +        + G  I
Sbjct: 62  SIGIRFKKINFAAEYWDNVFEHFLIEYKAGRTPNPDILCNKEIKFKAFLSYVHLLGGNYI 121

Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV 168
               +A T     G   +V G+ +     Y        +  +T   +G      V
Sbjct: 122 ATGHYARTRVLEDGSVQLVKGLDDNKDQTYFLYTLGQEQLRQTIFPIGNIEKSKV 176


>gi|150402995|ref|YP_001330289.1| argininosuccinate synthase [Methanococcus maripaludis C7]
 gi|150034025|gb|ABR66138.1| Argininosuccinate synthase [Methanococcus maripaludis C7]
          Length = 397

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 62/190 (32%), Gaps = 22/190 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +   A+L +SGG D+S CL    D++  +V +++ D GQ  +  +E      KK   L  
Sbjct: 2   QEKIAVLAYSGGLDTSCCLKLLEDKYDYKVISVAVDVGQPEEDLIEPEEK-AKKFGVL-- 58

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  + + +      +   +                         +  +  A LA  
Sbjct: 59  -------KHYTID---AKEEFATEYIFRAIKANALYEGYPLSTALARPLIAIKIAELAEE 108

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G + I  G        +        +  E  I   +          + L + E  + A+
Sbjct: 109 VGASAISHGCTGKGNDQFRFESVMRAKTPEIEIVAPIRD--------LNLTRTEEIEYAK 160

Query: 186 DIGGQDLVNL 195
           + G    VNL
Sbjct: 161 EKGIPVPVNL 170


>gi|29345565|ref|NP_809068.1| tRNA-specific 2-thiouridylase MnmA [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|81587200|sp|Q8ABF5|MNMA1_BACTN RecName: Full=tRNA-specific 2-thiouridylase mnmA 1
 gi|29337457|gb|AAO75262.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides thetaiotaomicron VPI-5482]
          Length = 355

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 47/181 (25%), Gaps = 7/181 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
            L SGG DSS  +    ++  +        G      ++C     + I       +    
Sbjct: 5   ALLSGGVDSSVVVHLLCEQGYKPTLFYIKIGMDGAEYMDCS--AEEDIEMSTAIARKYGL 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
              ++ L    +   +     +    +        +  + I F  F   +      T   
Sbjct: 63  SLEVVDLH--KEYWENVAAYAIDKIKKGLTPNPDVMCNKLIKFGCFEQQVGKNFDFTATG 120

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLAQDIGG 189
                    G            +    L    ++ V     P+  L K E  ++A   G 
Sbjct: 121 HYATTIRQDGKTWLGTAKDPVKDQTDFLAQIDYLQVSKLMFPIGGLMKQEVREIASRAGL 180

Query: 190 Q 190
            
Sbjct: 181 P 181


>gi|15606230|ref|NP_213608.1| hypothetical protein aq_898 [Aquifex aeolicus VF5]
 gi|2983434|gb|AAC07016.1| putative protein [Aquifex aeolicus VF5]
          Length = 251

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 16/36 (44%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
             AL L SGG DSS  +    ++   V+   F  G
Sbjct: 3  KRKALALLSGGLDSSLAVKLVQEQGIEVKAFHFYTG 38


>gi|206901476|ref|YP_002251205.1| tRNA methyl transferase [Dictyoglomus thermophilum H-6-12]
 gi|206740579|gb|ACI19637.1| tRNA methyl transferase [Dictyoglomus thermophilum H-6-12]
          Length = 327

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 36/123 (29%), Gaps = 14/123 (11%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +KK   A+ L SGG DS       L +   V  ++F             L + KK  E +
Sbjct: 1   MKKV-RAISLISGGLDSILATWLILQQGIEVIGVTF-------YTPFFNLELPKKACEFL 52

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     H++ +         +        +      +TF+  +    L        
Sbjct: 53  N------IPLHVVDITEEYMAILKNPRFGYGKNMNPCIDCHTFMVKKAKELLPKFDADFI 106

Query: 125 RLG 127
             G
Sbjct: 107 ITG 109


>gi|124485953|ref|YP_001030569.1| GMP synthase [Methanocorpusculum labreanum Z]
 gi|124363494|gb|ABN07302.1| GMP synthase (glutamine-hydrolyzing) [Methanocorpusculum labreanum
           Z]
          Length = 508

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 56/188 (29%), Gaps = 23/188 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS            ++  +  D+G   K E      + +       ++
Sbjct: 213 KKVLCALSGGVDSSVAAVLINKAVGKQLTCIFVDHGLLRKNEGNEVEEIFR------NQF 266

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +L   ++    +      S   K   +  ++              F+      A ++G
Sbjct: 267 DINLIRVNVEDQFLGKLAGVSDPEKKRKIIGEE--------------FIRVFEAEAKKIG 312

Query: 128 -ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLAQ 185
            +  +V G    D           I++      L        +  PL  L K E  +   
Sbjct: 313 TVDFLVQGTIYPDVIESGPGAAAVIKSHHNVGGLPDNVDFKEIIEPLRILFKDEVRRAGL 372

Query: 186 DIGGQDLV 193
           ++G  + +
Sbjct: 373 ELGIPEKL 380


>gi|269302798|gb|ACZ32898.1| tRNA(Ile)-lysidine synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 319

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 16/45 (35%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
              LL  SGG DS        +R      +  D+G R+    E 
Sbjct: 24 KKRYLLALSGGSDSLFLFYLLKERGVSFTAVHIDHGWRSTSAQEA 68


>gi|227501721|ref|ZP_03931770.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Corynebacterium accolens ATCC 49725]
 gi|227077746|gb|EEI15709.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Corynebacterium accolens ATCC 49725]
          Length = 355

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 45/177 (25%), Gaps = 5/177 (2%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK-KIVELMPKWKDSLGE 73
            SGG DSS   + A++    V  +     +  +   E        +      +  D LG 
Sbjct: 1   MSGGVDSSVAAARAVEAGHDVVGVHLALHKDAQQTREKARGCCSLEDSADARRICDKLGI 60

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
              +      +     +  +          PN  +     I           LG   +  
Sbjct: 61  PFYVW--DFSEEFKEEVITDFVDSYSRGETPNPCLRCNEKIKFRALLQKGMALGFDAVAT 118

Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYETWKLAQDIG 188
           G   T        R       ++ +   + +    H         K +  + A   G
Sbjct: 119 GHYATLDDDGYMRRSKDENKDQSYVLGVISAEELDHCFFPIGDTPKPQIREEAAAHG 175


>gi|222153939|ref|YP_002563116.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus uberis 0140J]
 gi|254811465|sp|B9DWD3|MNMA_STRU0 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|222114752|emb|CAR43910.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus uberis 0140J]
          Length = 373

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 51/194 (26%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D  K     ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MSDNSKI--RVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLSEYKAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYAQVRRDEDGIVHMLRGVDNGKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  ++A+  G
Sbjct: 174 LQKSEVREIAERAG 187


>gi|134046630|ref|YP_001098115.1| argininosuccinate synthase [Methanococcus maripaludis C5]
 gi|132664255|gb|ABO35901.1| argininosuccinate synthase [Methanococcus maripaludis C5]
          Length = 397

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 61/190 (32%), Gaps = 22/190 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +   A+L +SGG D+S CL    D++  +V +++ D GQ  +  +E      KK   L  
Sbjct: 2   QEKIAVLAYSGGLDTSCCLKLLEDKYDYKVISVAVDVGQPEEDLIEPEEK-AKKFGVL-- 58

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  + + +      +                             +  +  A LA  
Sbjct: 59  -------KHYTID---AKEEFAKDYIFRAIKANALYEGYPLSTALARPLIAIKIAELAEE 108

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G + I  G        +        +  E  I   +          + L + E  + A+
Sbjct: 109 VGASAISHGCTGKGNDQFRFESVMRAKTPEIEIVAPIRD--------LNLTRTEEIEYAK 160

Query: 186 DIGGQDLVNL 195
           + G    V+L
Sbjct: 161 EKGIPVPVDL 170


>gi|293604355|ref|ZP_06686762.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Achromobacter piechaudii ATCC 43553]
 gi|292817232|gb|EFF76306.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Achromobacter piechaudii ATCC 43553]
          Length = 360

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 43/184 (23%), Gaps = 15/184 (8%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS        +   V  L     + +     C     + +++          E 
Sbjct: 3   MSGGVDSSVTAWLLKQQGYEVVGLFMKNWEDDDDSEYCSTR--QDLLDAASVADLVGVEF 60

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
             +            +      +      PN  V     I        A  LG  +I  G
Sbjct: 61  EFVN---FAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMALGAEHIATG 117

Query: 135 VCETDYSGYPDCRHDTI----------RAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                     +                        L          PL  + K E  ++A
Sbjct: 118 HYARVREVPAEGGGTQFQLLKALDASKDQSYFLHRLNQAQLSRTLFPLGDIHKTEVRRIA 177

Query: 185 QDIG 188
            +IG
Sbjct: 178 HEIG 181


>gi|189485341|ref|YP_001956282.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [uncultured Termite group 1 bacterium phylotype Rs-D17]
 gi|205828982|sp|B1GZY9|MNMA_UNCTG RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|170287300|dbj|BAG13821.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [uncultured Termite group 1 bacterium phylotype Rs-D17]
          Length = 360

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/201 (12%), Positives = 48/201 (23%), Gaps = 18/201 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC------------ 52
           ++     L+  SGG DS+        +   V   +           +             
Sbjct: 1   METEMKILIGLSGGVDSAVAAYLLKKQGYEVTGTTMSIWDNFLPAPKTKVNDSCLGPENE 60

Query: 53  RLCVRKKIVELMPK---WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
            +    KI + +       D  GE   + L    +      T N  ++            
Sbjct: 61  NIETAHKIADFLTIPLYVTDCSGEYKKVVLENFRNEYKEGRTPNPCIRCNAYIKFGILPA 120

Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
                 L F     +  G    +     T+                    L  ++     
Sbjct: 121 AVKKTGLSFD---KFATGHYANIGFDSSTNMYKLYKAADLNKDQTYFLYRLTQKTLSETI 177

Query: 170 TPLMWLKKYETWKLAQDIGGQ 190
            PL    K +   +A+ IG  
Sbjct: 178 FPLGIYTKEQVRNIAKKIGLP 198


>gi|313892419|ref|ZP_07826010.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Dialister microaerophilus UPII 345-E]
 gi|313119180|gb|EFR42381.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Dialister microaerophilus UPII 345-E]
          Length = 512

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 58/187 (31%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS           +++  +  D+G     E        K++VE    
Sbjct: 216 KNKVICALSGGVDSSVAAVLVHRAIGEQLTCVFVDHGFMRLGE-------AKQVVETFKN 268

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            K ++   HI       ++           KI      NTF    + I            
Sbjct: 269 -KFNMKLVHIDASKHFMELLEGVTEPEKKRKIIGAEFINTFQREADKI-----------K 316

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +  +V G    D          TI++      L  +    +  PL  L K E  +L + 
Sbjct: 317 DVKFLVQGTLYPDVVESGTATAATIKSHHNVGGLPKDMKFKLIEPLRELFKDEVRELGRQ 376

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 377 LGMPEEI 383


>gi|307287836|ref|ZP_07567872.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX0109]
 gi|306501170|gb|EFM70476.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX0109]
 gi|315164727|gb|EFU08744.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX1302]
          Length = 374

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 49/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MAD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAKVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRLGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A +LG   +  G      +         R       +T     L          PL  
Sbjct: 114 DYAMQLGADYVATGHYAQVETDENGVVHMLRGIDNNKDQTYFLSQLSQAQLAKTMFPLGG 173

Query: 175 LKKYETWKLAQDIG 188
           ++K E   +A+  G
Sbjct: 174 MEKSEVRAIAERAG 187


>gi|294013099|ref|YP_003546559.1| argininosuccinate synthase [Sphingobium japonicum UT26S]
 gi|292676429|dbj|BAI97947.1| argininosuccinate synthase [Sphingobium japonicum UT26S]
          Length = 405

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 59/208 (28%), Gaps = 15/208 (7%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +  K    +L FSGG D+S  L W    +   V T + D GQ  ++E          + E
Sbjct: 1   MSDKINRIVLAFSGGLDTSVILKWLQQTYQCEVVTFTADLGQGEELEPARAKARLMGVKE 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
               + D L E+ +            S      + +   ++    +  R I         
Sbjct: 61  -EHIFIDDLREEFVKDYVF---PMMRSNALYEGLYLLGTSIARPLIAKRQIEIAKQVGAD 116

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV----TVHTPLMWLKK- 177
           A   G T         +   Y       + A     +L   + +      H   +   K 
Sbjct: 117 AVSHGATGKGNDQVRFELGYYGLAPDIKVIAPWREWDLTSRTRLIEFAEKHQIPIPRDKR 176

Query: 178 -----YETWKLAQDIGGQDLVNLILEES 200
                     +        ++    EE+
Sbjct: 177 GESPFSTDANMLHTSSEGKVLEDPWEET 204


>gi|282159938|gb|ADA79329.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Francisella tularensis subsp. tularensis NE061598]
          Length = 378

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 39/135 (28%), Gaps = 5/135 (3%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +I +    ++  SGG DSS        +   V  +     + +  +  C     + I + 
Sbjct: 18  VIMENKKVIVGISGGVDSSVSALLLKQQGYDVTGVFMKNWEEDDTDEFCS--AEQDIADA 75

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                        +           ++ ++  ++ +    PN  +     I      +  
Sbjct: 76  QAVCDSIGIPFKKIN---FAAEYWDNVFEHFLIEYKAGRTPNPDILCNKEIKFKAFLSYV 132

Query: 124 YRLGITNIVIGVCET 138
           + LG   I  G    
Sbjct: 133 HLLGGDYIATGHYAQ 147


>gi|229545347|ref|ZP_04434072.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX1322]
 gi|257084787|ref|ZP_05579148.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis Fly1]
 gi|229309554|gb|EEN75541.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX1322]
 gi|256992817|gb|EEU80119.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis Fly1]
          Length = 374

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 49/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MAD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAKVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRLGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A +LG   +  G      +         R       +T     L          PL  
Sbjct: 114 DYAMQLGADYVATGHYAQVETDENGVVHMLRGIDNNKDQTYFLSQLSQAQLAKTMFPLGG 173

Query: 175 LKKYETWKLAQDIG 188
           ++K E   +A+  G
Sbjct: 174 MEKSEVRAIAERAG 187


>gi|254500493|ref|ZP_05112644.1| argininosuccinate synthase [Labrenzia alexandrii DFL-11]
 gi|222436564|gb|EEE43243.1| argininosuccinate synthase [Labrenzia alexandrii DFL-11]
          Length = 406

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 45/151 (29%), Gaps = 7/151 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L +SGG D+S  L W        V T + D GQ  ++E        +K  E+M   
Sbjct: 7   KKVVLAYSGGLDTSIILKWLQTELGCEVVTFTADLGQGEELEP------ARKKAEMMGIK 60

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +  + +     +         +      + +   ++    +  R I         A   G
Sbjct: 61  EIYVDDLREEFIRDFVFPMFRANAVYEGVYLLGTSIARPLISKRLIEIAEETGADAVAHG 120

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAI 158
            T         + S Y       + A     
Sbjct: 121 ATGKGNDQVRFELSAYALNPDIKVIAPWRDW 151


>gi|329121915|ref|ZP_08250529.1| GMP synthase [Dialister micraerophilus DSM 19965]
 gi|327467712|gb|EGF13208.1| GMP synthase [Dialister micraerophilus DSM 19965]
          Length = 512

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 58/187 (31%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS           +++  +  D+G     E        K++VE    
Sbjct: 216 KNKVICALSGGVDSSVAAVLVHRAIGEQLTCVFVDHGFMRLGE-------AKQVVETFKN 268

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            K ++   HI       ++           KI      NTF    + I            
Sbjct: 269 -KFNMKLVHIDASKHFMELLEGVTEPEKKRKIIGAEFINTFQREADKI-----------K 316

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +  +V G    D          TI++      L  +    +  PL  L K E  +L + 
Sbjct: 317 DVKFLVQGTLYPDVVESGTATAATIKSHHNVGGLPKDMKFKLIEPLRELFKDEVRELGRQ 376

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 377 LGMPEEI 383


>gi|303234345|ref|ZP_07320984.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Finegoldia magna BVS033A4]
 gi|302494461|gb|EFL54228.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Finegoldia magna BVS033A4]
          Length = 510

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 19/51 (37%), Gaps = 1/51 (1%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
              LL  SGG DSS C +         +  +  D+G   K E +      K
Sbjct: 216 KKVLLALSGGVDSSVCAALLSRAIGKNLTCVFVDHGLMRKNEGDEVEAAFK 266


>gi|302379961|ref|ZP_07268440.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Finegoldia magna ACS-171-V-Col3]
 gi|302312187|gb|EFK94189.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Finegoldia magna ACS-171-V-Col3]
          Length = 510

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 19/51 (37%), Gaps = 1/51 (1%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
              LL  SGG DSS C +         +  +  D+G   K E +      K
Sbjct: 216 KKVLLALSGGVDSSVCAALLSRAIGKNLTCVFVDHGLMRKNEGDEVEAAFK 266


>gi|281202538|gb|EFA76740.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
           [Polysphondylium pallidum PN500]
          Length = 465

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 42/192 (21%), Gaps = 12/192 (6%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +I K P   +  SGG DS+        +  +V+ +             C     K   + 
Sbjct: 66  LINKKPEICVGLSGGVDSAVTAYLLKKQGFKVQCVYIKSWDEKDELGYCTGE--KDYSDA 123

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                        +  A       + +  +   +      PN  V     I        A
Sbjct: 124 QDVANRLQLP---IYHADFVKEYWNRVFNSFLEEYSQGYTPNPDVFCNREIKFNVFYEYA 180

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-------HDTIRAIETAINLGMESHVTVHTPLMWLK 176
             +G   I  G                                           P+    
Sbjct: 181 KSIGADMIATGHYSRLQYDDELESARLLRGVDPNKDQSYFLCMTEGRQLYRSLFPIGDYV 240

Query: 177 KYETWKLAQDIG 188
           K +   LA  +G
Sbjct: 241 KTDIKALANQLG 252


>gi|257082170|ref|ZP_05576531.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis E1Sol]
 gi|256990200|gb|EEU77502.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis E1Sol]
          Length = 374

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 49/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MAD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAKVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRLGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A +LG   +  G      +         R       +T     L          PL  
Sbjct: 114 DYAIQLGADYVATGHYAQVETDENGVVHMLRGIDNNKDQTYFLSQLSQAQLAKTMFPLGG 173

Query: 175 LKKYETWKLAQDIG 188
           ++K E   +A+  G
Sbjct: 174 MEKSEVRAIAERAG 187


>gi|253571710|ref|ZP_04849116.1| tRNA-specific 2-thiouridylase mnmA 1 [Bacteroides sp. 1_1_6]
 gi|251838918|gb|EES67003.1| tRNA-specific 2-thiouridylase mnmA 1 [Bacteroides sp. 1_1_6]
          Length = 355

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 47/181 (25%), Gaps = 7/181 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
            L SGG DSS  +    ++  +        G      ++C     + I       +    
Sbjct: 5   ALLSGGVDSSVVVHLLCEQGYKPTLFYIKIGMDGAEYMDCS--AEEDIEMSTAIARKYGL 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
              ++ L    +   +     +    +        +  + I F  F   +      T   
Sbjct: 63  SLEVVDLH--KEYWENVAAYAIDKIKKGLTPNPDVMCNKLIKFGCFEQQVGKNFDFTATG 120

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLAQDIGG 189
                    G            +    L    ++ V     P+  L K E  ++A   G 
Sbjct: 121 HYATTIRQDGKTWLGTAKDPVKDQTDFLAQIDYLQVSKLMFPIGGLMKQEVREIASRAGL 180

Query: 190 Q 190
            
Sbjct: 181 P 181


>gi|229821518|ref|YP_002883044.1| GMP synthase, large subunit [Beutenbergia cavernae DSM 12333]
 gi|229567431|gb|ACQ81282.1| GMP synthase, large subunit [Beutenbergia cavernae DSM 12333]
          Length = 515

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 54/185 (29%), Gaps = 11/185 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+   +       D++  +  D+G     E      V +  V+      
Sbjct: 212 RAICGLSGGVDSAVAAALVQRAIGDQLTCVFVDHGLLRAGE---AEQVERDFVDAT---- 264

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G   ++  A    ++  +   +   K +        V       LV  A        
Sbjct: 265 ---GVHLMVVDARERFLTALAGISDPEQKRKIIGREFIRVFEAAARDLVAQAGEDGADVR 321

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +    +  PL  L K E   +  ++G
Sbjct: 322 FLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPEDLEFELVEPLRTLFKDEVRAVGLELG 381

Query: 189 GQDLV 193
             + +
Sbjct: 382 VPEEI 386


>gi|237741734|ref|ZP_04572215.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium sp. 4_1_13]
 gi|294785652|ref|ZP_06750940.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium sp. 3_1_27]
 gi|229429382|gb|EEO39594.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium sp. 4_1_13]
 gi|294487366|gb|EFG34728.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium sp. 3_1_27]
          Length = 362

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 52/185 (28%), Gaps = 17/185 (9%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +  SGG DSST       +   +  ++       K E      V   +            
Sbjct: 28  VAMSGGVDSSTVAYLLKQQGYDIFGVTMKTF---KDEDSDAKKVCDDLG----------I 74

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           E ++L +    +     +   V   +         V  R  I            G + + 
Sbjct: 75  EHYVLDVR--NEFKEKVMDYFVNEYMNGRTPNPCMVCNR-HIKFGKMLDFILSKGASFMA 131

Query: 133 IGVCETDYSGYPDCRHD-TIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
            G      +G      D     +     +  +    +  P+  L+K +  +LA+ +G + 
Sbjct: 132 TGHYTKLKNGLLSVGDDSNKDQVYFLSQIEKDRLSKIIFPVGDLEKTKLRELAKQMGVRV 191

Query: 192 LVNLI 196
                
Sbjct: 192 YSKKD 196


>gi|223933686|ref|ZP_03625662.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus suis 89/1591]
 gi|223897639|gb|EEF64024.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus suis 89/1591]
          Length = 419

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 46/189 (24%), Gaps = 11/189 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS       ++   V  +             C     +   ++  
Sbjct: 50  NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGFC--TATEDYKDVAA 107

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    + +            + +    + +    PN  V     I        A  
Sbjct: 108 VADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDYAMN 164

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMWLKKYE 179
           LG   +  G             H    A            L  E       PL  L+K +
Sbjct: 165 LGADYVATGHYAQVSRDEDGTVHMLRGADNGKDQTYFLSQLSQEQLQKTMFPLGHLQKPQ 224

Query: 180 TWKLAQDIG 188
             ++A+  G
Sbjct: 225 VREIAERAG 233


>gi|239616502|ref|YP_002939824.1| argininosuccinate synthase [Kosmotoga olearia TBF 19.5.1]
 gi|239505333|gb|ACR78820.1| argininosuccinate synthase [Kosmotoga olearia TBF 19.5.1]
          Length = 428

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR 45
          K    +L +SGG D+S  L W  ++   V     + GQR
Sbjct: 2  KKEKVILAYSGGLDTSVILKWLSEKGFEVIAFVANVGQR 40


>gi|169824011|ref|YP_001691622.1| GMP synthase [Finegoldia magna ATCC 29328]
 gi|254800099|sp|B0S0S7|GUAA_FINM2 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|167830816|dbj|BAG07732.1| GMP synthase [Finegoldia magna ATCC 29328]
          Length = 510

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 19/51 (37%), Gaps = 1/51 (1%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
              LL  SGG DSS C +         +  +  D+G   K E +      K
Sbjct: 216 KKVLLALSGGVDSSVCAALLSRAIGKNLTCVFVDHGLMRKNEGDEVEAAFK 266


>gi|157150417|ref|YP_001451360.1| tRNA(Ile)-lysidine synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|189035973|sp|A8B000|TILS_STRGC RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|157075211|gb|ABV09894.1| tRNA(Ile)-lysidine synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 425

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 51/198 (25%), Gaps = 18/198 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQR--NKVELECRLCVRKKI 60
           +    LL  SGG DS T L+       +    +     ++ QR     E +    + +K+
Sbjct: 18  EHQRVLLAISGGLDSMTLLNLLYKYQKELDIELILAHINHKQRIEADQEEKQLKEIAQKL 77

Query: 61  VE------LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII 114
                       + +    D          +     T  V     D+     F+      
Sbjct: 78  GVKILTSSFSGVFSEKSARDFRYNF-FKKVMQEEDCTALVTAHHADDQAETIFMRILRGS 136

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
            L + + +  R       +     ++S                 N    + V  H   + 
Sbjct: 137 RLRYLSGMKDRQPFGGGELIRPLLEFSKTDFPTVFHFEDASNFENTYFRNRVRNHYFPLL 196

Query: 175 LK-----KYETWKLAQDI 187
                  K     L  +I
Sbjct: 197 ETENPRIKQAIINLGTEI 214


>gi|145593248|ref|YP_001157545.1| argininosuccinate synthase [Salinispora tropica CNB-440]
 gi|145302585|gb|ABP53167.1| Argininosuccinate synthase [Salinispora tropica CNB-440]
          Length = 408

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 62/205 (30%), Gaps = 28/205 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           +L FSGG D+S  L W  +R+  R+     + GQ    EL+      +K+     +  D 
Sbjct: 13  VLAFSGGLDTSVALVWLKERYHCRLTAFIANLGQGA--ELDTAARKAEKLGADEVRVADL 70

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
            GE             + +        +  +++    +    +  +      A   G T 
Sbjct: 71  RGEFAR----DYAFPMYRANALYEGQYLMGSSIGRPLIAAAQLRVVEEVGADAVAHGATG 126

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
                   + +         + +     +L                + +    A+  G +
Sbjct: 127 KGNDQIRFEMTLAALRPDIMVISPWREWDLS--------------SRSDLLAYARRHGIE 172

Query: 191 DLV---NLILE-ES---HTCYLGKR 208
             +   +     +S   HT Y G+ 
Sbjct: 173 LDLSSGDRPYSIDSNLLHTSYEGEE 197


>gi|34763143|ref|ZP_00144111.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
           [Fusobacterium nucleatum subsp. vincentii ATCC 49256]
 gi|27887172|gb|EAA24275.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
           [Fusobacterium nucleatum subsp. vincentii ATCC 49256]
          Length = 362

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 52/185 (28%), Gaps = 17/185 (9%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +  SGG DSST       +   +  ++       K E      V   +            
Sbjct: 28  VAMSGGVDSSTVAYLLKQQGYDIFGVTMKTF---KDEDSDAKKVCDDLG----------I 74

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           E ++L +    +     +   V   +         V  R  I            G + + 
Sbjct: 75  EHYVLDVR--NEFKEKVMDYFVNEYMNGRTPNPCMVCNR-HIKFGKMLDFILSKGASFMA 131

Query: 133 IGVCETDYSGYPDCRHD-TIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
            G      +G      D     +     +  +    +  P+  L+K +  +LA+ +G + 
Sbjct: 132 TGHYTKLKNGLLSVGDDSNKDQVYFLSQIEKDRLSKIIFPVGDLEKTKLRELAKQMGVRV 191

Query: 192 LVNLI 196
                
Sbjct: 192 YSKKD 196


>gi|237801139|ref|ZP_04589600.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331023996|gb|EGI04053.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 155

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 35/135 (25%), Gaps = 5/135 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS      +++  +VE L     + +     C    R+ + +      
Sbjct: 2   KRVIVGMSGGVDSSVSAVLLMEQGYQVEGLFMKNWEEDDGTEYC--TAREDLADAQAVCD 59

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + H        +   +     +             +  R  I        A  LG 
Sbjct: 60  KIGIKLHT--ANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFKAFLDYALMLGA 116

Query: 129 TNIVIGVCETDYSGY 143
             I  G         
Sbjct: 117 DLIATGHYVRRRDID 131


>gi|206896038|ref|YP_002247576.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Coprothermobacter proteolyticus DSM 5265]
 gi|206738655|gb|ACI17733.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Coprothermobacter proteolyticus DSM 5265]
          Length = 347

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 53/180 (29%), Gaps = 5/180 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +  SGG DS+  L    +    V  +  +     + + +    V  ++  L  +   
Sbjct: 2   KIAVGLSGGIDSTVSLLRLKEEGHHVTAVFLNMLPEGEYQEKTCCSVDSQL--LAKRVAM 59

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           + G    +    L +     +       ++    PN  V     + +     LA + G  
Sbjct: 60  NQGVPFEVW--DLTETFQKHVINIFKAMVKKGLTPNPCVFCNRCVKIGAFVELAMQKGFD 117

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW-LKKYETWKLAQDIG 188
            +  G       G      D+ +     + L  +  +      +  L + E    A   G
Sbjct: 118 AVATGHYARQREGNLYKAIDSWKDQSYMLALVEKQVLAKVLFPLGELTREEVISYAHSHG 177


>gi|297180756|gb|ADI16963.1| predicted ATPase of the PP-loop superfamily implicated in cell
          cycle control [uncultured Sphingobacteriales bacterium
          HF0010_19H17]
          Length = 441

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 19/57 (33%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
          K    L+  SGG DS   L         VE    ++  R +        V++    L
Sbjct: 16 KDDKILVALSGGLDSVALLYLMHMSGFYVEAAHCNFNLRGEESDGDAQFVKELCAAL 72


>gi|224540371|ref|ZP_03680910.1| hypothetical protein BACCELL_05284 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518022|gb|EEF87127.1| hypothetical protein BACCELL_05284 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 353

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 45/181 (24%), Gaps = 7/181 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +L SGG DSS  +    ++  R        G      ++C     +              
Sbjct: 5   VLLSGGVDSSVVVHLLCEQGYRPSLFYIKIGMDGTDYMDCS--AEEDWEMATAIAHRYGL 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
              ++ L    +         +    +        +  R I F  F   +          
Sbjct: 63  PLEMVDLQ--KEYWEQVAAYAIDKIRRGLTPNPDVMCNRFIKFGCFEQKVGKEFDFIATG 120

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLAQDIGG 189
                    G            +    L    ++ V     PL  L K E   +A++ G 
Sbjct: 121 HYATTVHKDGKVWLGIAVDPVKDQTDFLAQIDYLQVSKLMFPLGGLMKQEVRDIARNAGL 180

Query: 190 Q 190
            
Sbjct: 181 P 181


>gi|222099463|ref|YP_002534031.1| PP-loop domain protein [Thermotoga neapolitana DSM 4359]
 gi|221571853|gb|ACM22665.1| PP-loop domain protein [Thermotoga neapolitana DSM 4359]
          Length = 327

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 58/201 (28%), Gaps = 18/201 (8%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
            + ++    L+  SGG+DS +           V+ L    G      ++    + +K  E
Sbjct: 65  KMFRRDSKILIAVSGGKDSVSLWHMLKKLGYEVDALFIRAG--RSGMVQKAQEIVEKNAE 122

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           L+        + HI+          +   + ++ +     L         ++        
Sbjct: 123 LL------GTKLHIVD--------ATEYFEGLSTQEISIMLRRPVCSICGVVRRYLMNKF 168

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           AY  G   +V G    D +          +  E  +          H  L+   K     
Sbjct: 169 AYENGYDVVVTGHNLNDEASVLLGNILHWQ--EGYLERQWPLLPKTHEKLVPKAKPLVLN 226

Query: 183 LAQDIGGQDLVNLILEESHTC 203
             +DI     +N I      C
Sbjct: 227 YEEDIKLYATLNEIPHLEMAC 247


>gi|210620566|ref|ZP_03292114.1| hypothetical protein CLOHIR_00057 [Clostridium hiranonis DSM 13275]
 gi|210155280|gb|EEA86286.1| hypothetical protein CLOHIR_00057 [Clostridium hiranonis DSM 13275]
          Length = 512

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 55/191 (28%), Gaps = 20/191 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            AL   SGG DSS           D +  +  D+G   K E +    + +   +      
Sbjct: 217 KALCGLSGGVDSSVAAVLMHRAIGDNLTCVFVDHGLLRKDEGDDVERIFRD--KFDMNLI 274

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               ED    L+ L  ++     + +  +               + FLV     A  +  
Sbjct: 275 RVNAEDRF--LSKLKGVTEPERKRKIIGEEFIRVFEEESEKLGKMDFLVQGTIYADVIE- 331

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                       SG+ +                      +  PL  L K E  ++  ++G
Sbjct: 332 ------------SGHGNGAATIKSHHNVGGLPEDVDFQEIIEPLRELFKDEVRRIGLELG 379

Query: 189 GQDLVNLILEE 199
             +  +LI   
Sbjct: 380 IDE--DLIYRH 388


>gi|83310224|ref|YP_420488.1| argininosuccinate synthase [Magnetospirillum magneticum AMB-1]
 gi|119361285|sp|Q2W896|ASSY_MAGMM RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|82945065|dbj|BAE49929.1| Argininosuccinate synthase [Magnetospirillum magneticum AMB-1]
          Length = 404

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 53/174 (30%), Gaps = 9/174 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L +SGG D+S  L W  D++   V T + D GQ  ++E          I E    +
Sbjct: 6   KKVVLAYSGGLDTSIILRWLQDQYQCEVVTFTADLGQGEELEPARAKARLMGIKE-ENIF 64

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D L E+ +            +      + +   ++    +  R I         A   G
Sbjct: 65  IDDLREEFVRDFVF---PMFRANALYEGVYLLGTSIARPLISKRQIEIANMVGADAVSHG 121

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV----TVHTPLMWLKK 177
            T         +   Y       + A     +L   + +      H   +   K
Sbjct: 122 ATGKGNDQVRFEMGYYALKPDIKVIAPWRLWDLTSRTKLLDFAEKHQIPIAKDK 175


>gi|298384487|ref|ZP_06994047.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides sp. 1_1_14]
 gi|298262766|gb|EFI05630.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides sp. 1_1_14]
          Length = 355

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 47/181 (25%), Gaps = 7/181 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
            L SGG DSS  +    ++  +        G      ++C     + I       +    
Sbjct: 5   ALLSGGVDSSVVVHLLCEQGYKPTLFYIKIGMDGAEYMDCS--AEEDIEMSTAIARKYGL 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
              ++ L    +   +     +    +        +  + I F  F   +      T   
Sbjct: 63  SLEVVDLH--KEYWENVAAYAIDKIKKGLTPNPDVMCNKLIKFGCFEQQVGKNFDFTATG 120

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLAQDIGG 189
                    G            +    L    ++ V     P+  L K E  ++A   G 
Sbjct: 121 HYATTIRQDGKTWLGTAKDPVKDQTDFLAQIDYLQVSKLMFPIGGLMKQEVREIASRAGL 180

Query: 190 Q 190
            
Sbjct: 181 P 181


>gi|167628194|ref|YP_001678693.1| gmp synthase (glutamine-hydrolyzing) [Heliobacterium modesticaldum
           Ice1]
 gi|226739629|sp|B0TI09|GUAA_HELMI RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|167590934|gb|ABZ82682.1| gmp synthase (glutamine-hydrolyzing) [Heliobacterium modesticaldum
           Ice1]
          Length = 513

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 56/185 (30%), Gaps = 20/185 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   L   SGG DSS           +++  +  D+G     E      + K   +    
Sbjct: 217 SGKVLCALSGGVDSSVAALLVHRAVGEQLTCVYVDHGFMRLNE---SERIIKTFRD---- 269

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               LG + I   A    ++  +   +   K +        V         F    A   
Sbjct: 270 ---ELGMNLIAVEASERFMAKVAGVSDPETKRKSIGNEFIRV---------FEEEAAKLG 317

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +  +V G    D         +TI+       L  +    +  PL  L K E  ++ Q 
Sbjct: 318 QVDFLVQGTLYPDVVESGTSTAETIKTHHNVGGLPEDMKFELIEPLRTLFKDEVREVGQR 377

Query: 187 IGGQD 191
           +G  +
Sbjct: 378 LGLPE 382


>gi|326568719|gb|EGE18789.1| argininosuccinate synthase [Moraxella catarrhalis BC8]
          Length = 448

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 23/61 (37%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              + FSGG D+S  L W   +       + + GQ ++ +        K+   +  +  
Sbjct: 14 KKVGIAFSGGLDTSAALLWMKQKGALPYAYTANLGQPDEDDYNAIPTKAKQYGAVKARLV 73

Query: 69 D 69
          D
Sbjct: 74 D 74


>gi|326565466|gb|EGE15637.1| argininosuccinate synthase [Moraxella catarrhalis 12P80B1]
          Length = 448

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 23/61 (37%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              + FSGG D+S  L W   +       + + GQ ++ +        K+   +  +  
Sbjct: 14 KKVGIAFSGGLDTSAALLWMKQKGALPYAYTANLGQPDEDDYNAIPTKAKQYGAVKARLV 73

Query: 69 D 69
          D
Sbjct: 74 D 74


>gi|326562714|gb|EGE13016.1| argininosuccinate synthase [Moraxella catarrhalis 103P14B1]
 gi|326568594|gb|EGE18665.1| argininosuccinate synthase [Moraxella catarrhalis BC7]
 gi|326574184|gb|EGE24132.1| argininosuccinate synthase [Moraxella catarrhalis 101P30B1]
 gi|326575623|gb|EGE25547.1| argininosuccinate synthase [Moraxella catarrhalis O35E]
          Length = 448

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 23/61 (37%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              + FSGG D+S  L W   +       + + GQ ++ +        K+   +  +  
Sbjct: 14 KKVGIAFSGGLDTSAALLWMKQKGALPYAYTANLGQPDEDDYNAIPTKAKQYGAVKARLV 73

Query: 69 D 69
          D
Sbjct: 74 D 74


>gi|296113545|ref|YP_003627483.1| argininosuccinate synthase [Moraxella catarrhalis RH4]
 gi|295921239|gb|ADG61590.1| argininosuccinate synthase [Moraxella catarrhalis RH4]
 gi|326559548|gb|EGE09962.1| argininosuccinate synthase [Moraxella catarrhalis 7169]
 gi|326564650|gb|EGE14868.1| argininosuccinate synthase [Moraxella catarrhalis 46P47B1]
 gi|326567769|gb|EGE17875.1| argininosuccinate synthase [Moraxella catarrhalis BC1]
 gi|326572588|gb|EGE22577.1| argininosuccinate synthase [Moraxella catarrhalis CO72]
          Length = 448

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 23/61 (37%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              + FSGG D+S  L W   +       + + GQ ++ +        K+   +  +  
Sbjct: 14 KKVGIAFSGGLDTSAALLWMKQKGALPYAYTANLGQPDEDDYNAIPTKAKQYGAVKARLV 73

Query: 69 D 69
          D
Sbjct: 74 D 74


>gi|268679656|ref|YP_003304087.1| argininosuccinate synthase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617687|gb|ACZ12052.1| argininosuccinate synthase [Sulfurospirillum deleyianum DSM 6946]
          Length = 409

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 46/159 (28%), Gaps = 5/159 (3%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + K     +L +SGG D+S  L W  D +   V T + D GQ  ++E   R       ++
Sbjct: 1   MKKNVKKVVLAYSGGLDTSIILKWLQDEYQCEVVTFTADIGQGEELEP-ARKKALSLGIK 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
               + + L E+ +            +        +   ++    +  R           
Sbjct: 60  PENIFIEDLKEEFVRDYVF---PMFRANAIYEGEYLLGTSIARPLIAKRQAEIAAMVGAD 116

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
               G T         +           I A     +L 
Sbjct: 117 GVSHGATGKGNDQVRFEMGYLSMNSDLVIIAPWREWDLN 155


>gi|303284375|ref|XP_003061478.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226456808|gb|EEH54108.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 384

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 48/206 (23%), Gaps = 19/206 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVET----LSFDYGQRN-------KVELECRLCVRK 58
              +L SGG DSS  L+        V      + F    RN       + +L     V  
Sbjct: 2   KVAVLLSGGVDSSVALTLLQAAGHDVTAFYLQIWFQEDFRNYWDQCPWEDDLSEARAVCD 61

Query: 59  KIVELMPKWK-----DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP-NTFVPGRN 112
            +   +           L   H +     G   +  +  N  +K            PGR 
Sbjct: 62  LLRVPLEVVPLTRPYWDLVVSHSVEEISRGRTPNPDMLCNSRVKFGAFREWLAETHPGRF 121

Query: 113 IIFLVFAATLAYRLGITNIVIGVCETDYSGYP--DCRHDTIRAIETAINLGMESHVTVHT 170
                       R G      G                           L       +  
Sbjct: 122 ARVASGHYAALERPGGPFGGAGDDADADGKVKLVMSGDAHKDQTYFLAALSQAQLEGLSF 181

Query: 171 PLMWLKKYETWKLAQDIGGQDLVNLI 196
           P+  L K E   +A+  G  +     
Sbjct: 182 PIGGLPKAEIRDIARRAGLPNANRKD 207


>gi|261855736|ref|YP_003263019.1| tRNA(Ile)-lysidine synthetase [Halothiobacillus neapolitanus c2]
 gi|261836205|gb|ACX95972.1| tRNA(Ile)-lysidine synthetase [Halothiobacillus neapolitanus c2]
          Length = 444

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 53/190 (27%), Gaps = 21/190 (11%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRF-----DRVETLSFDYGQRNKVELECRLCVR 57
           D + K    +L  SGG DS   L W  +++     D +  +S D+ Q +    E      
Sbjct: 8   DSLPKPLKVVLASSGGADSLGALVWLHNQYQQGVIDEITVVSIDH-QIHPDSAEWSARAC 66

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           +       +      E H + + +     H   +     +        +++  R      
Sbjct: 67  Q-------QASFFSIESHCIKIDVPTRGIHGQHSLESRARWARYEALRSWLYRRYQPEDE 119

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                A+ L        +     SG              A             P + + +
Sbjct: 120 PVLVTAHHLEDQVETFLLAALRGSGAAGLSAMPALTRFGAGWH--------WRPFLQMPR 171

Query: 178 YETWKLAQDI 187
            +  + A  +
Sbjct: 172 DDLRQFAASL 181


>gi|206901586|ref|YP_002251252.1| GMP synthase (glutamine-hydrolyzing) [Dictyoglomus thermophilum
           H-6-12]
 gi|206740689|gb|ACI19747.1| GMP synthase (glutamine-hydrolyzing) [Dictyoglomus thermophilum
           H-6-12]
          Length = 507

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 53/188 (28%), Gaps = 18/188 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DS+T          D++  +  D+G     E E    V K++      
Sbjct: 210 ENRVLLAVSGGVDSTTLAVLLQRAVGDKLTAIFVDHGLLRMGEKEEVTEVLKRLG----- 264

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     + L ++             +  ++                         L
Sbjct: 265 ----------VNLVVVDAEERFLEKLKGVVDPEEKRKIIGHEFVEVFKEEAKKRGPFKFL 314

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+  S         I+       L  E    +  P  +L K E  ++A+ 
Sbjct: 315 AQGTLYPDVIESAASHTGMA--AKIKTHHNVGGLPEELGFELIEPFRYLFKDEVRRIAEI 372

Query: 187 IGGQDLVN 194
           +G  + + 
Sbjct: 373 LGLPENII 380


>gi|32266697|ref|NP_860729.1| hypothetical protein HH1198 [Helicobacter hepaticus ATCC 51449]
 gi|32262748|gb|AAP77795.1| conserved hypothetical protein [Helicobacter hepaticus ATCC
          51449]
          Length = 348

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 24/59 (40%)

Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          AL LFSGG DS   +    D+   V  L F+ G  +  +           +++  +  D
Sbjct: 3  ALALFSGGCDSLISMKLLKDQGIDVIALHFNIGFGSNKDKLAYFQNATAQIDVKLQILD 61


>gi|29376579|ref|NP_815733.1| tRNA-specific 2-thiouridylase MnmA [Enterococcus faecalis V583]
 gi|227520188|ref|ZP_03950237.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX0104]
 gi|227555378|ref|ZP_03985425.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis HH22]
 gi|256762940|ref|ZP_05503520.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis T3]
 gi|256853584|ref|ZP_05558949.1| tRNA-specific 2-thiouridylase mnmA [Enterococcus faecalis T8]
 gi|257079445|ref|ZP_05573806.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis JH1]
 gi|257087270|ref|ZP_05581631.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis D6]
 gi|257090346|ref|ZP_05584707.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis CH188]
 gi|257419691|ref|ZP_05596685.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis T11]
 gi|257422150|ref|ZP_05599140.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis X98]
 gi|294780347|ref|ZP_06745716.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis PC1.1]
 gi|307270242|ref|ZP_07551555.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX4248]
 gi|307295656|ref|ZP_07575491.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX0411]
 gi|312900841|ref|ZP_07760135.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX0470]
 gi|312902847|ref|ZP_07762051.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX0635]
 gi|73920123|sp|Q820U1|MNMA_ENTFA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|29344043|gb|AAO81803.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis V583]
 gi|227072360|gb|EEI10323.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX0104]
 gi|227175492|gb|EEI56464.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis HH22]
 gi|256684191|gb|EEU23886.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis T3]
 gi|256710527|gb|EEU25570.1| tRNA-specific 2-thiouridylase mnmA [Enterococcus faecalis T8]
 gi|256987475|gb|EEU74777.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis JH1]
 gi|256995300|gb|EEU82602.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis D6]
 gi|256999158|gb|EEU85678.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis CH188]
 gi|257161519|gb|EEU91479.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis T11]
 gi|257163974|gb|EEU93934.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis X98]
 gi|294452611|gb|EFG21044.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis PC1.1]
 gi|306496368|gb|EFM65945.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX0411]
 gi|306513458|gb|EFM82077.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX4248]
 gi|310633901|gb|EFQ17184.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX0635]
 gi|311291940|gb|EFQ70496.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX0470]
 gi|315025815|gb|EFT37747.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX2137]
 gi|315028590|gb|EFT40522.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX4000]
 gi|315031109|gb|EFT43041.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX0017]
 gi|315149261|gb|EFT93277.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX0012]
 gi|315157187|gb|EFU01204.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX0043]
 gi|315171619|gb|EFU15636.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX1342]
 gi|315173202|gb|EFU17219.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX1346]
 gi|315575062|gb|EFU87253.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX0309B]
 gi|315576621|gb|EFU88812.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX0630]
 gi|315582488|gb|EFU94679.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX0309A]
 gi|327535526|gb|AEA94360.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis OG1RF]
          Length = 374

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 49/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MAD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAKVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRLGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A +LG   +  G      +         R       +T     L          PL  
Sbjct: 114 DYAMQLGADYVATGHYAQVETDENGVVHMLRGIDNNKDQTYFLSQLSQAQLAKTMFPLGG 173

Query: 175 LKKYETWKLAQDIG 188
           ++K E   +A+  G
Sbjct: 174 MEKSEVRAIAERAG 187


>gi|298529721|ref|ZP_07017124.1| GMP synthase, large subunit [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298511157|gb|EFI35060.1| GMP synthase, large subunit [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 516

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 56/194 (28%), Gaps = 20/194 (10%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQ-RNKVELECRLCVRKK 59
            ++I      +   SGG DS+            R+  +  D G  R+   LE    + K 
Sbjct: 213 REMIPDDEQVVCGLSGGIDSTVVAVLLHKAIGKRLHCILVDNGVLRHNEALEVVESLTKH 272

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
               +   +        L L+ L  +      + +                 ++ +L   
Sbjct: 273 FDLNLKHVEAQD-----LFLSRLHGVKDPEEKRKIIGHTFIEVFEKEAKSIPDVKWLAQG 327

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
                 +              S         I++      L  +  + +  PL  L K E
Sbjct: 328 TLYPDVIE-------------SVSFKGPSAVIKSHHNVGGLPEKMDLKLVEPLRELFKDE 374

Query: 180 TWKLAQDIGGQDLV 193
             K+A ++G  D +
Sbjct: 375 VRKVAVELGIPDTI 388


>gi|219850754|ref|YP_002465186.1| GMP synthase subunit B [Methanosphaerula palustris E1-9c]
 gi|254799664|sp|B8GIB2|GUAAB_METPE RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
           AltName: Full=GMP synthetase
 gi|219545013|gb|ACL15463.1| GMP synthase, large subunit [Methanosphaerula palustris E1-9c]
          Length = 305

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 53/182 (29%), Gaps = 27/182 (14%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS C + A     +R+E +  D G   K E +                 
Sbjct: 23  RVVMALSGGVDSSVCAALAAQAIGERLEPIYVDTGLMRKGETDR---------------- 66

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 H+     L  +  S    +    + D       +  R    +      A + G 
Sbjct: 67  ----IRHLFGHLNLRIVDASDEFLDALAGVADPETKRKIIGERF---IRVFEREAEKTGA 119

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
           T ++ G    D                  + +       V  PL  L K E  ++A  +G
Sbjct: 120 TVLLQGTIYPDRIESEGGIKSHHNVGGMPLGIAFTQ---VLEPLRDLYKDEVREVAGALG 176

Query: 189 GQ 190
             
Sbjct: 177 LP 178


>gi|154323444|ref|XP_001561036.1| hypothetical protein BC1G_00121 [Botryotinia fuckeliana B05.10]
 gi|150842350|gb|EDN17543.1| hypothetical protein BC1G_00121 [Botryotinia fuckeliana B05.10]
          Length = 405

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 3/59 (5%)

Query: 7  KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           A   + L +SGG D+S  L+W +++   V     D GQ  + + E       KI  + 
Sbjct: 1  MAKDKVCLAYSGGLDTSCILAWLIEKGYDVVCFMADVGQ--EEDFEAAKAKAMKIGAVA 57


>gi|19704100|ref|NP_603662.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
           [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
 gi|81479855|sp|Q8R5X3|MNMA1_FUSNN RecName: Full=tRNA-specific 2-thiouridylase mnmA 1
 gi|19714304|gb|AAL94961.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
           [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
          Length = 362

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 46/184 (25%), Gaps = 15/184 (8%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +  SGG DSST       +   +  ++       K E      V   +            
Sbjct: 28  VAMSGGVDSSTVAYLLKQQGYDIFGVTMKTF---KDEDSDAKKVCDDLG----------I 74

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           E +IL +             N    +         V  R I F      +  +       
Sbjct: 75  EHYILDVRDEFKEKVVDYFVN--EYMNGRTPNPCMVCNRYIKFGKMLDFILSKDASFMAT 132

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
               +                +     +       +  P+  L+K +  +LA+ +G +  
Sbjct: 133 GHYTKLKNGLLSVGDDSNKDQVYFLSQIEKNKLSKIIFPVGDLEKTKLRELAEQLGVRVY 192

Query: 193 VNLI 196
               
Sbjct: 193 SKKD 196


>gi|329568350|gb|EGG50159.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX1467]
          Length = 374

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 49/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MAD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAKVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRLGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A +LG   +  G      +         R       +T     L          PL  
Sbjct: 114 DYAMQLGADYVATGHYAQVETDENGVVHMLRGIDNNKDQTYFLSQLSQAQLAKTMFPLGG 173

Query: 175 LKKYETWKLAQDIG 188
           ++K E   +A+  G
Sbjct: 174 MEKSEVRAIAERAG 187


>gi|317011239|gb|ADU84986.1| GMP synthase [Helicobacter pylori SouthAfrica7]
          Length = 508

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 52/180 (28%), Gaps = 16/180 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DS+   +       D +  +  D+G   K E E    + K +     +  
Sbjct: 211 KVLCAVSGGVDSTVVATLLHRAIKDNLIAVFVDHGLLRKNEKERVQAMFKDL-----QIP 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  +   + L+ L  +S   L + +            F        L        ++  
Sbjct: 266 LNTIDAKEIFLSKLKGVSEPELKRKII----GETFIEAFEKEAKKHHLKG------KIEF 315

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   S         I+       L       +  PL  L K E   L +++G
Sbjct: 316 LAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEVRSLGKELG 375


>gi|291539156|emb|CBL12267.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain or B
           subunit/GMP synthase (glutamine-hydrolyzing), N-terminal
           domain or A subunit [Roseburia intestinalis XB6B4]
          Length = 539

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 48/190 (25%), Gaps = 22/190 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS            ++  +  D+G   K E +    V          
Sbjct: 230 NGKVLLALSGGVDSSVAAGLLSRAIGKQLTCVFVDHGLLRKNEGDEVEEV---------- 279

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G +    L  +   +       +A   +    P          F+      A ++
Sbjct: 280 ----FGPNGQFDLNFIRVNAQDRYYGKLAGVTE----PEHKRKIIGEEFIRVFEEEAKKI 331

Query: 127 GIT---NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           G            +   SG                         +  PL  L K E  K 
Sbjct: 332 GAVDFLAQGTIYPDVVESGLGGESAVIKSHHNVGGLPDFVDFKEIIEPLRNLFKDEVRKA 391

Query: 184 AQDIGGQDLV 193
             ++G  + +
Sbjct: 392 GLELGIPEKL 401


>gi|291536851|emb|CBL09963.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain or B
           subunit/GMP synthase (glutamine-hydrolyzing), N-terminal
           domain or A subunit [Roseburia intestinalis M50/1]
          Length = 524

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 48/190 (25%), Gaps = 22/190 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS            ++  +  D+G   K E +    V          
Sbjct: 215 NGKVLLALSGGVDSSVAAGLLSRAIGKQLTCVFVDHGLLRKNEGDEVEEV---------- 264

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G +    L  +   +       +A   +    P          F+      A ++
Sbjct: 265 ----FGPNGQFDLNFIRVNAQDRYYGKLAGVTE----PEHKRKIIGEEFIRVFEEEAKKI 316

Query: 127 GIT---NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           G            +   SG                         +  PL  L K E  K 
Sbjct: 317 GAVDFLAQGTIYPDVVESGLGGESAVIKSHHNVGGLPDFVDFKEIIEPLRNLFKDEVRKA 376

Query: 184 AQDIGGQDLV 193
             ++G  + +
Sbjct: 377 GLELGIPEKL 386


>gi|261493287|ref|ZP_05989814.1| hypothetical protein COK_1696 [Mannheimia haemolytica serotype A2
           str. BOVINE]
 gi|261311137|gb|EEY12313.1| hypothetical protein COK_1696 [Mannheimia haemolytica serotype A2
           str. BOVINE]
          Length = 406

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 38/136 (27%), Gaps = 4/136 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 44  NSKKKVIIGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 100

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     +A            +  + I F  F    A  
Sbjct: 101 AVADKLG-MKLHKINFAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEYAAED 159

Query: 126 LGITNIVIGVCETDYS 141
           LG   I  G      S
Sbjct: 160 LGADYIATGHYVRRTS 175


>gi|261496469|ref|ZP_05992849.1| hypothetical protein COI_2187 [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261307672|gb|EEY08995.1| hypothetical protein COI_2187 [Mannheimia haemolytica serotype A2
           str. OVINE]
          Length = 405

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 38/136 (27%), Gaps = 4/136 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 43  NSKKKVIIGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 99

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     +A            +  + I F  F    A  
Sbjct: 100 AVADKLG-MKLHKINFAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEYAAED 158

Query: 126 LGITNIVIGVCETDYS 141
           LG   I  G      S
Sbjct: 159 LGADYIATGHYVRRTS 174


>gi|260886459|ref|ZP_05897722.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Selenomonas sputigena ATCC 35185]
 gi|260863841|gb|EEX78341.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Selenomonas sputigena ATCC 35185]
          Length = 344

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 52/179 (29%), Gaps = 13/179 (7%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS C +   ++   V  ++      ++                  +  D LG +
Sbjct: 1   MSGGVDSSLCAALLQEQGYEVLGITMQLSDDSREMNGVSSAATD-----ARRVADFLGIE 55

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI------ 128
           H++  A    +    +      +      PN  V     +      + A   G       
Sbjct: 56  HVV--ADFRTLFSDKVVDYFLTEYLTARTPNPCVICNRFLKFGELLSFAKEKGADFLATG 113

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             + +   E         R +          L  E    +  PL   +K ET  LAQ +
Sbjct: 114 HYVRVEKEEDGSFSLKKGRDEKKDQSYVLYRLPREILSHILFPLGSYRKEETRALAQKL 172


>gi|240143280|ref|ZP_04741881.1| GMP synthase [Roseburia intestinalis L1-82]
 gi|257204758|gb|EEV03043.1| GMP synthase [Roseburia intestinalis L1-82]
          Length = 524

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 48/190 (25%), Gaps = 22/190 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS            ++  +  D+G   K E +    V          
Sbjct: 215 NGKVLLALSGGVDSSVAAGLLSRAIGKQLTCVFVDHGLLRKNEGDEVEEV---------- 264

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G +    L  +   +       +A   +    P          F+      A ++
Sbjct: 265 ----FGPNGQFDLNFIRVNAQDRYYGKLAGVTE----PEHKRKIIGEEFIRVFEEEAKKI 316

Query: 127 GIT---NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           G            +   SG                         +  PL  L K E  K 
Sbjct: 317 GAVDFLAQGTIYPDVVESGLGGESAVIKSHHNVGGLPDFVDFKEIIEPLRNLFKDEVRKA 376

Query: 184 AQDIGGQDLV 193
             ++G  + +
Sbjct: 377 GLELGIPEKL 386


>gi|254372089|ref|ZP_04987582.1| hypothetical protein FTCG_01230 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151569820|gb|EDN35474.1| hypothetical protein FTCG_01230 [Francisella novicida GA99-3549]
          Length = 359

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 52/186 (27%), Gaps = 11/186 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +    ++  SGG DSS        +   V  +     + +  +  C     + I +    
Sbjct: 2   ENKKVIVGISGGVDSSVSALLLKQQGYDVTGVFMKNWEEDDTDEFCS--AEQDIADAQAV 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     +           ++ ++  ++ +    PN  +     I      +  + L
Sbjct: 60  CDSIGIPFKKIN---FAAEYWDNVFEHFLIEYKAGRTPNPDILCNKEIKFKAFLSYVHLL 116

Query: 127 GITNIVIGVCETDYSGYPDCRH------DTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           G   I  G                    D          LG E       P+  ++K + 
Sbjct: 117 GGNYIATGHYARTRVLEDGSVQLVKGLDDNKDQTYFLYTLGQEQLRQTIFPIGNIEKSKV 176

Query: 181 WKLAQD 186
            ++A++
Sbjct: 177 REIAKE 182


>gi|329768495|ref|ZP_08259984.1| GMP synthase [Gemella haemolysans M341]
 gi|328836723|gb|EGF86378.1| GMP synthase [Gemella haemolysans M341]
          Length = 514

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 56/185 (30%), Gaps = 16/185 (8%)

Query: 10  SALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS   +       D++  +  D+G   K E E  +    K +E      
Sbjct: 217 KVLCALSGGVDSSVVAALLDKAIGDQLICMFIDHGLLRKGEAEAVMNTFSKEIEGGFNMN 276

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               +     L  L  +S     + +                 N    VF    A    +
Sbjct: 277 LIKVDAKDRFLGKLKGVSDPEQKRKI---------------IGNEFVYVFDEECAKLHDV 321

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G   TD          TI++      L  +   ++  PL  L K E   L + +G
Sbjct: 322 PFLAQGTLYTDVIESGTKNAQTIKSHHNVGGLPEDMRFSLIEPLNTLFKDEVRALGEALG 381

Query: 189 GQDLV 193
               +
Sbjct: 382 LPHEI 386


>gi|325181184|emb|CCA15598.1| unnamed protein product [Albugo laibachii Nc14]
 gi|325181887|emb|CCA16342.1| unnamed protein product [Albugo laibachii Nc14]
          Length = 422

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 30/93 (32%), Gaps = 4/93 (4%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
          M+   K     +L +SGG D+S  L W  ++   V     + GQ +  +          +
Sbjct: 1  MSVQAKSGEKVVLAYSGGLDTSIILKWLANKGFEVICYCANVGQ-HGEDYTKVKEKALAL 59

Query: 61 VE---LMPKWKDSLGEDHILPLAILGDISHSSL 90
                +   +    ED I        I  S  
Sbjct: 60 GATKVYIEDLRSEFVEDFIFEAVKANAIYESRY 92


>gi|241889310|ref|ZP_04776613.1| GMP synthase [Gemella haemolysans ATCC 10379]
 gi|241864147|gb|EER68526.1| GMP synthase [Gemella haemolysans ATCC 10379]
          Length = 461

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 56/185 (30%), Gaps = 16/185 (8%)

Query: 10  SALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS   +       D++  +  D+G   K E E  +    K +E      
Sbjct: 164 KVLCALSGGVDSSVVAALLDKAIGDQLICMFIDHGLLRKGEAEAVMNTFSKEIEGGFNMN 223

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               +     L  L  +S     + +                 N    VF    A    +
Sbjct: 224 LIKVDAKDRFLGKLKGVSDPEQKRKI---------------IGNEFVYVFDEECAKLHDV 268

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G   TD          TI++      L  +   ++  PL  L K E   L + +G
Sbjct: 269 PFLAQGTLYTDVIESGTKNAQTIKSHHNVGGLPEDMRFSLIEPLNTLFKDEVRALGEALG 328

Query: 189 GQDLV 193
               +
Sbjct: 329 LPHEI 333


>gi|294878153|ref|XP_002768284.1| hypothetical protein Pmar_PMAR025097 [Perkinsus marinus ATCC 50983]
 gi|239870532|gb|EER01002.1| hypothetical protein Pmar_PMAR025097 [Perkinsus marinus ATCC 50983]
          Length = 484

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 51/188 (27%), Gaps = 11/188 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALD-RFDRVE-----TLSFDYGQRNKVELECRLCVRK 58
           + K+ + +L  SGG DSS+ L      R+ RV       L   Y    +   E R  +  
Sbjct: 89  MTKSRTVVLSLSGGVDSSSTLILLCALRYHRVVDWKLRALYMGYSANRENLDEARSEL-- 146

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
               L+    +            L     S  T +  +   +       +  R       
Sbjct: 147 ---NLVAWLCEQCNVQLFAFNIDLPRPHGSEGTTSSGVTRDEYETQTKTIRFRMYSLASG 203

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
                  LG     +     +         D         +        V  PL+  +K 
Sbjct: 204 DENCVVVLGHHQDDVDENRLEQLSRGHVMGDMDGMHRVRESPPGLDRCIVCRPLIHERKS 263

Query: 179 ETWKLAQD 186
              K+A +
Sbjct: 264 TFVKVATE 271


>gi|229916099|ref|YP_002884745.1| argininosuccinate synthase [Exiguobacterium sp. AT1b]
 gi|229467528|gb|ACQ69300.1| argininosuccinate synthase [Exiguobacterium sp. AT1b]
          Length = 403

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 56/195 (28%), Gaps = 16/195 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                +L +SGG D+S  + W  ++   V  +  + G     +LE       K+      
Sbjct: 1   MKQKLVLAYSGGLDTSVAIKWLDEQGYDVIAVCLNVG--EGKDLEKIQQKAMKVGAKKSI 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D++ E     +      S  + T    +    + L    +  + +        +A   
Sbjct: 59  VIDAVDEF----VNEFARYSMQAHTLYEGIYPLVSALSRPLISKKLVEVAQAEGAVAVAH 114

Query: 127 GITNIVIGVCETDYSGY----------PDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
           G T         + S +          P       R  E A     +  + +     +  
Sbjct: 115 GCTGKGNDQVRFEVSIHALDPSLEIVAPVREWKWSREEEIAYAAKHQIPIPIVQEEPFSI 174

Query: 177 KYETWKLAQDIGGQD 191
               W  A + G  +
Sbjct: 175 DQNIWGRAIECGILE 189


>gi|170288548|ref|YP_001738786.1| PP-loop domain-containing protein [Thermotoga sp. RQ2]
 gi|170176051|gb|ACB09103.1| PP-loop domain protein [Thermotoga sp. RQ2]
          Length = 304

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 58/201 (28%), Gaps = 18/201 (8%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
            +  +    L+  SGG+DS +           V+ L    G+     ++    + +K  E
Sbjct: 42  KMFGRNSKILIAVSGGKDSVSLWHMLKKLGYEVDALFIRAGK--SGMVQKAQEIVEKNAE 99

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           L+        + HI+          +   + ++ +     L         ++        
Sbjct: 100 LLN------TKLHIVD--------ATEYFEGLSTQEISIMLRRPVCSICGVVRRYLMNKF 145

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           AY  G   +V G    D +          +  E  +          H  L+   K     
Sbjct: 146 AYENGYDVVVTGHNLNDEASVLLGNILHWQ--EGYLERQWPLLPKTHEKLVPKAKPLVLN 203

Query: 183 LAQDIGGQDLVNLILEESHTC 203
             +DI     +N I      C
Sbjct: 204 YEEDIKLYATLNEIPHLEMAC 224


>gi|118475361|ref|YP_892864.1| thiamine biosynthesis protein:ExsB [Campylobacter fetus subsp.
          fetus 82-40]
 gi|118414587|gb|ABK83007.1| thiamine biosynthesis protein:ExsB [Campylobacter fetus subsp.
          fetus 82-40]
          Length = 329

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 15/37 (40%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
               L LFSGG DS   +     +   V  L+ D G
Sbjct: 1  MNKKCLALFSGGLDSMLAIKLISSQGIEVHALNIDIG 37


>gi|87198574|ref|YP_495831.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Novosphingobium aromaticivorans DSM 12444]
 gi|87134255|gb|ABD24997.1| GMP synthase (glutamine-hydrolyzing) [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 540

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 60/184 (32%), Gaps = 17/184 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+       +   D++  +  D+G     E        +++V L     
Sbjct: 244 RVICGLSGGVDSAVAAVLIHEAIGDQLTCVFVDHGLMRMGE-------AEQVVSLFRNHY 296

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +       +    LG ++  +  +     I    +       R +         A  L  
Sbjct: 297 NIPLVHKDVSALFLGGLAGVTDPEAKRKFIGKTFIDVFEAEARQV-------GGADFLAQ 349

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+    +      TI++      L    ++ +  PL  L K E   L +++G
Sbjct: 350 GTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRALGRELG 407

Query: 189 GQDL 192
             ++
Sbjct: 408 LPEI 411


>gi|305666262|ref|YP_003862549.1| argininosuccinate synthase [Maribacter sp. HTCC2170]
 gi|88708253|gb|EAR00490.1| argininosuccinate synthase [Maribacter sp. HTCC2170]
          Length = 396

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 9   PSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE--LMP 65
              +L +SGG D S      + ++   V  +S + G  +K E+        ++       
Sbjct: 2   NKVVLAYSGGLDTSYCAKYLSKEKGYEVHAVSVNTGGFSKEEISEINSKAIELGATTYTS 61

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                +  D ++   I G++  +  T  +++  +        V     +   + A  +  
Sbjct: 62  IDAVQIFYDKVVKYLIFGNVLKN-NTYPLSVSAERIVQAIEIVNHAKKMGADYIAHGSTG 120

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK--L 183
            G   +   +     +   +          +                    KY   K   
Sbjct: 121 AGNDQVRFDMIFQIIAPEIEIITPIRDNKLSREYEIEYLQKNGVDYPWEKAKYSINKGLW 180

Query: 184 AQDIGGQDLV--NLILEES 200
              +GG + +  NL L +S
Sbjct: 181 GTSVGGDETLTSNLPLPDS 199


>gi|323484330|ref|ZP_08089697.1| argininosuccinate synthase [Clostridium symbiosum WAL-14163]
 gi|323402324|gb|EGA94655.1| argininosuccinate synthase [Clostridium symbiosum WAL-14163]
          Length = 416

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 49/162 (30%), Gaps = 14/162 (8%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNK---VELECRLCVRKK 59
           + KK    +L +SGG D+S  + W  +     V  +S D GQ  +   +E +       K
Sbjct: 1   MEKKYNKIVLAYSGGLDTSVLIPWLKENYGCEVVAVSADVGQGAELIGLEEKALKTGASK 60

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +   +   K    +++I+P    G              +   +     +  R +      
Sbjct: 61  L--YIEDLKKEFVDEYIIPTMKAGAAY--------EHYLLGTSFARPIIAKRIVEIAKKE 110

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
              A   G T         + +         + A      L 
Sbjct: 111 GADAICHGCTGKGNDQVRFELAIKAFAPSMDVIAPWRFWELN 152


>gi|313498097|gb|ADR59463.1| MnmA [Pseudomonas putida BIRD-1]
          Length = 374

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 48/186 (25%), Gaps = 10/186 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS      +++  +VE L     + +     C    R+ + +     
Sbjct: 11  KTRVIVGMSGGVDSSVSALLLIEQGYQVEGLFMKNWEEDDGTEYC--TAREDLADAQAVC 68

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                + H        +   +     +             +  R  I        A  LG
Sbjct: 69  DRIGIKLHT--ANFAAEYWDNVFEHFLDEYKAGRTPNPDILCNRE-IKFKAFLDYALSLG 125

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G                              +G +       P+  L+K E   
Sbjct: 126 ADLIATGHYVRRRDTGTLTELLKGLDPNKDQSYFLHAVGGKEIARTLFPVGELEKPEVRA 185

Query: 183 LAQDIG 188
           +A+  G
Sbjct: 186 IAEKHG 191


>gi|258645897|ref|ZP_05733366.1| GMP synthase [Dialister invisus DSM 15470]
 gi|260403268|gb|EEW96815.1| GMP synthase [Dialister invisus DSM 15470]
          Length = 512

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 52/185 (28%), Gaps = 20/185 (10%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            L   SGG DSS           D++  +  D+G   + E        +++V+       
Sbjct: 219 VLCALSGGVDSSVAAVLVHKAVGDKLTCVFVDHGFLRQGE-------AEQVVDTFTNKFK 271

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                       L  +   +  +     I    +                        + 
Sbjct: 272 IKLIHKDASRHFLSLLKGVTEPEKKRKAIGAEFIHTF------------QEEANKLEDVK 319

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G    D          TI++      L  +    +  PL  L K E  +L +++G 
Sbjct: 320 FLVQGTLYPDVVESGTATAATIKSHHNVGGLPKDMKFELIEPLRELFKDEVRQLGRELGL 379

Query: 190 QDLVN 194
            + V 
Sbjct: 380 PEDVI 384


>gi|257463047|ref|ZP_05627449.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
          [Fusobacterium sp. D12]
          Length = 333

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 3/55 (5%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVET---LSFDYGQRNKVELECRLCV 56
          +     AL LFSGG DS+  +    ++   V     +S  +G  N+        +
Sbjct: 1  MVSRIKALALFSGGLDSALAIKIVQEQGIEVIALNFVSHFFGGVNEKAEYMAKQL 55


>gi|302876907|ref|YP_003845540.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium cellulovorans 743B]
 gi|307687595|ref|ZP_07630041.1| tRNA-specific 2-thiouridylase MnmA [Clostridium cellulovorans 743B]
 gi|302579764|gb|ADL53776.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium cellulovorans 743B]
          Length = 373

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 50/190 (26%), Gaps = 12/190 (6%)

Query: 4   IIKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           + K+      +L  SGG DSS       ++   V  +  +          C     +   
Sbjct: 1   MEKENKNIKVVLGVSGGVDSSVAALELKNQGYDVIGVFMNNWDDEDENGVC--TSVQDFE 58

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           ++           + +            + +    + +    PN  V     I       
Sbjct: 59  DVRKVCDSISVPYYSVN---FQKEYWDRVFEYFLAEYRSGRTPNPDVMCNKEIKFKAFLD 115

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLK 176
            A  +G   I +G          + +      +          L          P+  L+
Sbjct: 116 FALTVGADYIAMGHYAQVDFRDGEYKLLRAADENKDQTYFLCKLNQYQLSKSMFPIGHLR 175

Query: 177 KYETWKLAQD 186
           K E  + A++
Sbjct: 176 KPEVREKARE 185


>gi|256425803|ref|YP_003126456.1| GMP synthase [Chitinophaga pinensis DSM 2588]
 gi|256040711|gb|ACU64255.1| GMP synthase, large subunit [Chitinophaga pinensis DSM 2588]
          Length = 512

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 56/185 (30%), Gaps = 19/185 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              ++  SGG DS+             +  +  D G   K E E  L   K +       
Sbjct: 217 KKVVMALSGGVDSTVAAELIHKAIGSNLYCIFVDNGLLRKNEFENVLDSYKHMG-----L 271

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    L    L  +S     + +  ++             +I FL         + 
Sbjct: 272 NVKGVNAKDLFFGELKGVSDPEKKRKIIGRLFIEVFQQEATLLTDISFLGQGTIYPDVIE 331

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                        S   +    TI++      L  + ++ +  PL +L K E  ++ ++I
Sbjct: 332 -------------SVSVNGPSVTIKSHHNVGGLPEKMNMGLVEPLRFLFKDEVRRVGREI 378

Query: 188 GGQDL 192
           G  ++
Sbjct: 379 GISEI 383


>gi|227503892|ref|ZP_03933941.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Corynebacterium striatum ATCC 6940]
 gi|227199515|gb|EEI79563.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Corynebacterium striatum ATCC 6940]
          Length = 355

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 47/177 (26%), Gaps = 5/177 (2%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK-KIVELMPKWKDSLGE 73
            SGG DSS   + A++    V  +     +  +   E        +      +  D LG 
Sbjct: 1   MSGGVDSSVAAARAVEAGHDVVGVHLALHKDAQQTREKARGCCSLEDSADARRICDKLGI 60

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
              +      +     +  +          PN  +     I           LG   +  
Sbjct: 61  PFYVW--DFSEQFKEEVIGDFVDSYARGETPNPCLRCNEKIKFRALLQKGMALGFDAVAT 118

Query: 134 GVCETDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
           G   T        R       ++ +   +  E     + P+    K +  + A   G
Sbjct: 119 GHYATLDDAGYMRRSKDENKDQSYVLGVISAEELEHCYFPIGDTPKPQIREEAARHG 175


>gi|156936928|ref|YP_001434724.1| hypothetical protein Igni_0133 [Ignicoccus hospitalis KIN4/I]
 gi|156565912|gb|ABU81317.1| phosphoadenosine phosphosulfate reductase [Ignicoccus hospitalis
           KIN4/I]
          Length = 421

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
           + +++    A++ +SGG+DS+  L  A    D V  +  D G
Sbjct: 217 SKVLEGCERAVVPWSGGKDSTAALLIAKRACDEVTAVYVDTG 258


>gi|330833760|ref|YP_004402585.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus suis ST3]
 gi|329307983|gb|AEB82399.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus suis ST3]
          Length = 419

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 46/189 (24%), Gaps = 11/189 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS       ++   V  +             C     +   ++  
Sbjct: 50  NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGFC--TATEDYKDVAA 107

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    + +            + +    + +    PN  V     I        A  
Sbjct: 108 VADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDYAMN 164

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMWLKKYE 179
           LG   +  G             H    A            L  E       PL  L+K +
Sbjct: 165 LGADYVATGHYAQVSRDEDGTVHMLRGADNGKDQTYFLSQLSQEQLQKTMFPLGHLQKPQ 224

Query: 180 TWKLAQDIG 188
             ++A+  G
Sbjct: 225 VREIAERAG 233


>gi|315634990|ref|ZP_07890271.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Aggregatibacter segnis ATCC 33393]
 gi|315476252|gb|EFU67003.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Aggregatibacter segnis ATCC 33393]
          Length = 383

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 36/138 (26%), Gaps = 4/138 (2%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               +   SGG DSS        +  +VE L        + + +   C     +      
Sbjct: 23  TKKVICGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQAV 79

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D LG   +  +    +   +     +             +  + I F  F    A  LG
Sbjct: 80  CDKLG-IKLHKINFAAEYWDNVFEHFLNEYKAGRTPNPDILCNKEIKFKAFLEYAAEDLG 138

Query: 128 ITNIVIGVCETDYSGYPD 145
              I  G          +
Sbjct: 139 ANYIATGHYVRRRGADDN 156


>gi|297380515|gb|ADI35402.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Helicobacter pylori v225d]
 gi|308064111|gb|ADO05998.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter pylori Sat464]
          Length = 342

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 48/176 (27%), Gaps = 15/176 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS       ++   +  +         ++L          ++   K  +
Sbjct: 2   KIAVLLSGGVDSSYSAYSLKEQGHELVGIY--------LKLHASEKKHDLYIKNAQKACE 53

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG    L +        S++        ++   PN       ++    A   A +LG  
Sbjct: 54  FLGIP--LEVLDFQKDFKSAVYDEFISAYEEGQTPNPCALCNPLMKFGLALDHALKLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            I  G                    T         L  E    +  PL  L K + 
Sbjct: 112 KIATGHYARVKEIDKVSYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDI 167


>gi|258542584|ref|YP_003188017.1| argininosuccinate synthase [Acetobacter pasteurianus IFO 3283-01]
 gi|256633662|dbj|BAH99637.1| argininosuccinate synthase [Acetobacter pasteurianus IFO 3283-01]
 gi|256636721|dbj|BAI02690.1| argininosuccinate synthase [Acetobacter pasteurianus IFO 3283-03]
 gi|256639774|dbj|BAI05736.1| argininosuccinate synthase [Acetobacter pasteurianus IFO 3283-07]
 gi|256642830|dbj|BAI08785.1| argininosuccinate synthase [Acetobacter pasteurianus IFO 3283-22]
 gi|256645885|dbj|BAI11833.1| argininosuccinate synthase [Acetobacter pasteurianus IFO 3283-26]
 gi|256648938|dbj|BAI14879.1| argininosuccinate synthase [Acetobacter pasteurianus IFO 3283-32]
 gi|256651925|dbj|BAI17859.1| argininosuccinate synthase [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654982|dbj|BAI20909.1| argininosuccinate synthase [Acetobacter pasteurianus IFO 3283-12]
          Length = 413

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 49/156 (31%), Gaps = 7/156 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K     +L +SGG D+S  L W  +     V T + D GQ  ++E        +K  E+ 
Sbjct: 8   KDVKKVVLAYSGGLDTSVILRWLQNTYGCEVVTFTADLGQGEELEP------ARKKAEMF 61

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +  + +     +         + T      +   ++    +  R I         A 
Sbjct: 62  GVKEIFVEDLRETFVKDFVFPMFRANTLYEGQYLLGTSIARPLIAQRQIEIAEAVGADAV 121

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
             G T         + + Y      T+ A     +L
Sbjct: 122 AHGATGKGNDQVRFELAYYALKPDITVIAPWREWDL 157


>gi|159905260|ref|YP_001548922.1| argininosuccinate synthase [Methanococcus maripaludis C6]
 gi|159886753|gb|ABX01690.1| Argininosuccinate synthase [Methanococcus maripaludis C6]
          Length = 397

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 61/190 (32%), Gaps = 22/190 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +   A+L +SGG D+S CL    D++  +V +++ D GQ  +  +E      KK   L  
Sbjct: 2   QEKIAVLAYSGGLDTSCCLKLLEDKYDYKVISVAVDVGQPEEDLIEPEEK-AKKFGVL-- 58

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  + + +      +                             +  +  A LA  
Sbjct: 59  -------KHYTID---AKEEFAKDYIFRAIKANALYEGYPLSTALARPLIAIKIAELAEE 108

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G + I  G        +        +  E  I   +          + L + E  + A+
Sbjct: 109 VGASAISHGCTGKGNDQFRFESVMRAKTPEIEIVAPIRD--------LNLTRTEEIEYAR 160

Query: 186 DIGGQDLVNL 195
           + G    VNL
Sbjct: 161 EKGIPVPVNL 170


>gi|52352404|gb|AAU43693.1| argininosuccinate synthase [uncultured archaeon GZfos26D8]
          Length = 388

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/201 (11%), Positives = 50/201 (24%), Gaps = 8/201 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +L +SGG D+S C+    +   +D V  ++ D GQ    +++       K+ +   +
Sbjct: 2   KKVVLAYSGGLDTSVCIPLLKEHYGYDEVIAVTVDVGQ-PGDDIKEAKERGAKLSDSYRE 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                         ++    +           +     +     R       A     + 
Sbjct: 61  IDAKEEFVRDYIFPLIKANGNYEGYVLGTAIARPLIAKHVVEVAREEKADAVAHGCTGKG 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL--- 183
                   V  T          +     E       E  + +     W      W     
Sbjct: 121 NDQLRFDAVFRTTDLDVVAPMRELSLTREEERKYAAEHGILLKPEHRWSVDENIWSRSIE 180

Query: 184 AQDIGGQDLV--NLILEESHT 202
             ++     V    I   + +
Sbjct: 181 GAELEEPSFVPPEEIFTWTVS 201


>gi|48478039|ref|YP_023745.1| putative ATPase [Picrophilus torridus DSM 9790]
 gi|48430687|gb|AAT43552.1| putative ATPase [Picrophilus torridus DSM 9790]
          Length = 208

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 37/96 (38%), Gaps = 5/96 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRV-ETLSF---DYGQR-NKVELECRLCVRKKIVELM 64
            A+ LFSGG+DS      A+++   V   ++    +Y    +    E        +   +
Sbjct: 2   KAVALFSGGKDSFLSAMIAMEQGFDVKRAVTIIPEEYSMMFHYPNAEKSRYAASLLSIDV 61

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD 100
               +S  E++IL L  +  +   ++  +      +
Sbjct: 62  EYIYESKFEEYILKLNDVDALVSGAIASDYQKTRIE 97


>gi|315587224|gb|ADU41605.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Helicobacter pylori 35A]
          Length = 342

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 48/176 (27%), Gaps = 15/176 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS       ++   +  +         ++L          ++   K  +
Sbjct: 2   KIAVLLSGGVDSSYSAYSLKEQGHELVGIY--------LKLHASEKKHDLYIKNAQKACE 53

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG    L +        S++        ++   PN       ++    A   A +LG  
Sbjct: 54  FLGIP--LEVLDFQKDFKSAVYDEFISAYEEGQTPNPCALCNPLMKFGLALDHALKLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            I  G                    T         L  E    +  PL  L K + 
Sbjct: 112 KIATGHYARVKEIDKVSYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDI 167


>gi|205822484|sp|Q1CRS3|MNMA_HELPH RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 342

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 48/176 (27%), Gaps = 15/176 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS       ++   +  +         ++L          ++   K  +
Sbjct: 2   KIAVLLSGGVDSSYSAYSLKEQGHELVGIY--------LKLHASEKKHDLYIKNAQKACE 53

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG    L +        S++        ++   PN       ++    A   A +LG  
Sbjct: 54  FLGIP--LEVLDFQKDFKSAVYDEFISAYEEGQTPNPCALCNPLMKFGLALDHALKLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            I  G                    T         L  E    +  PL  L K + 
Sbjct: 112 KIATGHYARVKEIDKVSYIQEAVDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDI 167


>gi|297584733|ref|YP_003700513.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus selenitireducens MLS10]
 gi|297143190|gb|ADH99947.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus selenitireducens MLS10]
          Length = 371

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/182 (8%), Positives = 42/182 (23%), Gaps = 8/182 (4%)

Query: 1   MNDIIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRK 58
           MN+  +      ++  SGG DSS       ++   V  +   ++   ++  +       +
Sbjct: 1   MNNEKRPEDTRIVVGMSGGVDSSVTAHLLKEQGYEVIGIFMKNWDDTDEFGVCTATEDYE 60

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
            ++ +  +            +           T  +             +     I    
Sbjct: 61  DVIRVCNQLDIPYYA-----VNFEKQYWDKVFTYFLDEYKSGRTPNPDVMC-NKEIKFKA 114

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
               A  LG   +  G            +    +         + +        +     
Sbjct: 115 FLDHAMTLGADYVATGHYAKVSHTPDGVKLLRGKDRNKDQTYFLNALSQDQLRHVLFPLG 174

Query: 179 ET 180
           + 
Sbjct: 175 DI 176


>gi|146322015|ref|YP_001201726.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus suis 98HAH33]
 gi|145692821|gb|ABP93326.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase, contains the PP-loop ATPase domain
           [Streptococcus suis 98HAH33]
 gi|292559420|gb|ADE32421.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus suis GZ1]
          Length = 423

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 46/189 (24%), Gaps = 11/189 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS       ++   V  +             C     +   ++  
Sbjct: 54  NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGFC--TATEDYKDVAA 111

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    + +            + +    + +    PN  V     I        A  
Sbjct: 112 VADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDYAMN 168

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMWLKKYE 179
           LG   +  G             H    A            L  E       PL  L+K +
Sbjct: 169 LGADYVATGHYAQVTRDEDGTVHMLRGADNGKDQTYFLSQLSQEQLQKTMFPLGHLQKPQ 228

Query: 180 TWKLAQDIG 188
             ++A+  G
Sbjct: 229 VREIAERAG 237


>gi|71897067|ref|NP_001026522.1| mitochondrial tRNA-specific 2-thiouridylase 1 [Gallus gallus]
 gi|75571355|sp|Q5ZKW0|MTU1_CHICK RecName: Full=Mitochondrial tRNA-specific 2-thiouridylase 1
 gi|53130608|emb|CAG31633.1| hypothetical protein RCJMB04_8p20 [Gallus gallus]
          Length = 424

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 30/119 (25%), Gaps = 9/119 (7%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-----QRNKVEL---ECRLC 55
           ++          SGG DS+        R  +V  +          Q         E    
Sbjct: 1   MLAAGRRVACAVSGGVDSAVAALLLRRRGYQVTGVFMKNWDPLDEQGACSVDRDCEDAYR 60

Query: 56  VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII 114
           V +K+     +    + E      + L        T N  +    +   N F+      
Sbjct: 61  VCQKLDIPFHQVS-YVKEYWNEVFSDLLKEYELGRTPNPDIVCNKHIKFNHFLHYAMDN 118


>gi|188528124|ref|YP_001910811.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter pylori Shi470]
 gi|229486342|sp|B2UV99|MNMA_HELPS RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|188144364|gb|ACD48781.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Helicobacter pylori Shi470]
          Length = 342

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 48/176 (27%), Gaps = 15/176 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS       ++   +  +         ++L          ++   K  +
Sbjct: 2   KIAVLLSGGVDSSYSAYSLKEQGHELVGIY--------LKLHASEKKHDLYIKNAQKACE 53

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG    L +        S++        ++   PN       ++    A   A +LG  
Sbjct: 54  FLGIP--LEVLDFQKDFKSAVYDEFISAYEEGQTPNPCALCNPLMKFGLALDHALKLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            I  G                    T         L  E    +  PL  L K + 
Sbjct: 112 KIATGHYARVKEIDKVSYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDI 167


>gi|146319824|ref|YP_001199536.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus suis 05ZYH33]
 gi|253752800|ref|YP_003025941.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus suis SC84]
 gi|253754625|ref|YP_003027766.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus suis P1/7]
 gi|253756558|ref|YP_003029698.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus suis BM407]
 gi|205828994|sp|A4VYE7|MNMA_STRSY RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205829102|sp|A4W4N7|MNMA_STRS2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|145690630|gb|ABP91136.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase, contains the PP-loop ATPase domain
           [Streptococcus suis 05ZYH33]
 gi|251817089|emb|CAZ52741.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus suis SC84]
 gi|251819022|emb|CAZ56869.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus suis BM407]
 gi|251820871|emb|CAR47637.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus suis P1/7]
          Length = 374

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 46/189 (24%), Gaps = 11/189 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS       ++   V  +             C     +   ++  
Sbjct: 5   NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGFC--TATEDYKDVAA 62

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    + +            + +    + +    PN  V     I        A  
Sbjct: 63  VADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDYAMN 119

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMWLKKYE 179
           LG   +  G             H    A            L  E       PL  L+K +
Sbjct: 120 LGADYVATGHYAQVTRDEDGTVHMLRGADNGKDQTYFLSQLSQEQLQKTMFPLGHLQKPQ 179

Query: 180 TWKLAQDIG 188
             ++A+  G
Sbjct: 180 VREIAERAG 188


>gi|315637305|ref|ZP_07892524.1| argininosuccinate synthase [Arcobacter butzleri JV22]
 gi|315478469|gb|EFU69183.1| argininosuccinate synthase [Arcobacter butzleri JV22]
          Length = 413

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 6/83 (7%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKK 59
          M+   K     +L +SGG D+S  L W  D +   V T + D GQ  +VE   +  +   
Sbjct: 1  MSK--KDIKKVVLAYSGGLDTSIILKWLQDEYNAEVITFTADLGQGEEVEPARQKAIACG 58

Query: 60 I---VELMPKWKDSLGEDHILPL 79
          I      +   K+   +D++ P+
Sbjct: 59 IKPENVFILDIKEEFVKDYVFPM 81


>gi|307565030|ref|ZP_07627547.1| GMP synthase (glutamine-hydrolyzing) [Prevotella amnii CRIS 21A-A]
 gi|307346343|gb|EFN91663.1| GMP synthase (glutamine-hydrolyzing) [Prevotella amnii CRIS 21A-A]
          Length = 514

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 56/188 (29%), Gaps = 21/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS C           +  +  D+G   K E         K++E    
Sbjct: 213 NDRVILGLSGGVDSSVCAVLLNKAIGSNLTCIFVDHGMLRKNEY-------NKVMEAYKG 265

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              ++                +S      ++   +      + GR+ + +  A       
Sbjct: 266 LGLNVV------------GVDASDKFFNDLQGVTDPEQKRKIIGRDFVEVFNAEAKKIT- 312

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G    D           I++      L  + H+ +  PL WL K E  ++   
Sbjct: 313 DAKWLAQGTIYPDRIESLSITGMVIKSHHNVGGLPSDMHLQLCEPLQWLFKDEVRRVGYS 372

Query: 187 IGGQDLVN 194
           +   + + 
Sbjct: 373 LNMPERLI 380


>gi|301168825|emb|CBW28416.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus influenzae 10810]
          Length = 418

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 35/135 (25%), Gaps = 4/135 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 +   SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 57  NATKKVICGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 113

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     +             +  + I F  F    A  
Sbjct: 114 AVCDKLG-IKLHKINFAAEYWDNVFEHFLTEYKAGRTPNPDILCNKEIKFKAFLEYAAED 172

Query: 126 LGITNIVIGVCETDY 140
           LG   I  G      
Sbjct: 173 LGADYIATGHYVRRA 187


>gi|294788612|ref|ZP_06753854.1| argininosuccinate synthase [Simonsiella muelleri ATCC 29453]
 gi|294483489|gb|EFG31174.1| argininosuccinate synthase [Simonsiella muelleri ATCC 29453]
          Length = 447

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 11/77 (14%)

Query: 4  IIKKAPSAL-----------LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
          +++ + + +           + FSGG D+S  L W   +       + + GQ ++ +   
Sbjct: 1  MMQMSNATILQNLPVGQKVGIAFSGGLDTSAALLWMKLKGANPYAYTANLGQPDEDDYNA 60

Query: 53 RLCVRKKIVELMPKWKD 69
               KK      +  D
Sbjct: 61 IPEKAKKYGAQEARLID 77


>gi|255534705|ref|YP_003095076.1| GMP synthase [Flavobacteriaceae bacterium 3519-10]
 gi|255340901|gb|ACU07014.1| GMP synthase (glutamine-hydrolyzing) [Flavobacteriaceae bacterium
           3519-10]
          Length = 509

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 53/185 (28%), Gaps = 18/185 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +L  SGG DSS           D+++ +  D G    +  E    V K   E      
Sbjct: 214 KVILGLSGGVDSSVAAVLIHRAIGDQLQCIFVDTG---LLRKEEAEKVMKNYGEHFKL-- 268

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   + L    D   S L      + +   + N FV   +              G 
Sbjct: 269 -------KIKLIDAKDRFLSKLKGISDPEEKRKIIGNEFVVVFDEESHKIEGAKFLAQG- 320

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   S         I++      L  E    +  PL  L K E  K+ +++G
Sbjct: 321 ----TIYPDVIESQSVKGPSAVIKSHHNVGGLPAEMDFELLEPLRELFKDEVRKVGEELG 376

Query: 189 GQDLV 193
               +
Sbjct: 377 IPHHL 381


>gi|167759430|ref|ZP_02431557.1| hypothetical protein CLOSCI_01777 [Clostridium scindens ATCC 35704]
 gi|167662987|gb|EDS07117.1| hypothetical protein CLOSCI_01777 [Clostridium scindens ATCC 35704]
          Length = 408

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 57/212 (26%), Gaps = 23/212 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L +SGG D++  + W  + F   V     D GQ  +++         K+     
Sbjct: 1   MKEKVVLAYSGGLDTTAIIPWLKENFDYEVICCCVDCGQGEELDGLEERA---KLSGASK 57

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            + + + +D             + +   V       N                   +A +
Sbjct: 58  LYIEDIVDD----------FCDNYVVPCVQAHAVYENKYLLGTSMARPAIAKKLVEVARK 107

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G + I  G                  A +  I                  + E     +
Sbjct: 108 EGASAICHGATGKGNDQIRFELGIKALAPDLKIIAPWRMTD----VWTMNSREEEIAYCK 163

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
             G    ++L  + SH+ Y   R+  +    G
Sbjct: 164 QHG----IDLPFDASHS-YSRDRNLWHISHEG 190


>gi|157737522|ref|YP_001490205.1| argininosuccinate synthase [Arcobacter butzleri RM4018]
 gi|172045650|sp|A8EUB2|ASSY_ARCB4 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|157699376|gb|ABV67536.1| argininosuccinate synthase [Arcobacter butzleri RM4018]
          Length = 413

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 6/83 (7%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKK 59
          M+   K     +L +SGG D+S  L W  D +   V T + D GQ  +VE   +  +   
Sbjct: 1  MSK--KDIKKVVLAYSGGLDTSIILKWLQDEYNAEVITFTADLGQGEEVEPARQKAIACG 58

Query: 60 I---VELMPKWKDSLGEDHILPL 79
          I      +   K+   +D++ P+
Sbjct: 59 IKPENVFILDIKEEFVKDYVFPM 81


>gi|148642542|ref|YP_001273055.1| PP family ATPase [Methanobrevibacter smithii ATCC 35061]
 gi|148551559|gb|ABQ86687.1| ATP-utilizing enzyme, PP-loop superfamily [Methanobrevibacter
          smithii ATCC 35061]
          Length = 336

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 21/68 (30%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
          K     + FSGG DS+     A +  D    ++ D        ++      K+       
Sbjct: 15 KNRKVAIAFSGGADSTLLAYLASEVSDDPIAITIDNHIFPTGFIKHCKKTAKEFGIRHQI 74

Query: 67 WKDSLGED 74
             +  E 
Sbjct: 75 IDLNFYEH 82


>gi|325263183|ref|ZP_08129918.1| GMP synthase [Clostridium sp. D5]
 gi|324031576|gb|EGB92856.1| GMP synthase [Clostridium sp. D5]
          Length = 515

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 50/188 (26%), Gaps = 22/188 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS       +    ++  +  D+G   K E +    V            
Sbjct: 218 KVLCALSGGVDSSVAAVMLSEAIGSQLTCVFVDHGLLRKDEGDEVEAV------------ 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G +    L  +   +       +A  ++               F+      A ++G 
Sbjct: 266 --FGPEGHYDLNFIRVNAQERFYSKLAGAVEPEEKRKII----GEEFIRVFEEEAQKIGA 319

Query: 129 TNIV---IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            + +       +   SG                         +  PL  L K E  K   
Sbjct: 320 VDFLVQGTIYPDVVESGLGGESAVIKSHHNVGGLPDYVDFKEIIEPLRDLFKDEVRKAGL 379

Query: 186 DIGGQDLV 193
           ++G  + +
Sbjct: 380 ELGIPERL 387


>gi|309972705|gb|ADO95906.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Haemophilus influenzae R2846]
          Length = 413

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 35/135 (25%), Gaps = 4/135 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 +   SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 52  NATKKVICGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 108

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     +             +  + I F  F    A  
Sbjct: 109 AVCDKLG-IKLHKINFAAEYWDNVFEHFLTEYKAGRTPNPDILCNKEIKFKAFLEYAAED 167

Query: 126 LGITNIVIGVCETDY 140
           LG   I  G      
Sbjct: 168 LGADYIATGHYVRRA 182


>gi|293390912|ref|ZP_06635246.1| tRNA-specific 2-thiouridylase mnmA [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290951446|gb|EFE01565.1| tRNA-specific 2-thiouridylase mnmA [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 383

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 51/188 (27%), Gaps = 9/188 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 +   SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 21  NATKKIICGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 77

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     ++            +  + I F  F    A  
Sbjct: 78  AVCDKLG-IKLHKINFAAEYWDNVFEHFLSEYKAGRTPNPDILCNKEIKFKAFLEYAAED 136

Query: 126 LGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           LG   I  G          + +      +          L          P+  ++K   
Sbjct: 137 LGANYIATGHYVRRRGADDNAQLLRGLDNNKDQSYFLYTLSKIQVGQSLFPVGNIEKPIV 196

Query: 181 WKLAQDIG 188
             +A+++G
Sbjct: 197 RAIAEELG 204


>gi|222147262|ref|YP_002548219.1| GMP synthase [Agrobacterium vitis S4]
 gi|254799666|sp|B9JZA3|GUAA_AGRVS RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|221734252|gb|ACM35215.1| GMP synthase [Agrobacterium vitis S4]
          Length = 520

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 55/184 (29%), Gaps = 17/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS       +   D++  +  D+G   K E          +      +
Sbjct: 223 KRVICALSGGVDSSVAALLIHEAVGDQLTCILVDHGLMRKNE------AADVVAMFKEHY 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              L     +    +G++   S         +        +              A  LG
Sbjct: 277 NLHLIHVDAID-RFVGELEGVSDP-------ETKRKIIGRLFIETFEEEAKKLGGADFLG 328

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   V E+    +      TI++      L    ++ +  PL  L K E   L +++
Sbjct: 329 QGTLYPDVIESV--SFSGGPSVTIKSHHNVGGLPDRMNMKLVEPLRELFKDEVRVLGKEL 386

Query: 188 GGQD 191
           G  D
Sbjct: 387 GLPD 390


>gi|210609821|ref|ZP_03288128.1| hypothetical protein CLONEX_00312 [Clostridium nexile DSM 1787]
 gi|210152748|gb|EEA83754.1| hypothetical protein CLONEX_00312 [Clostridium nexile DSM 1787]
          Length = 409

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 64/212 (30%), Gaps = 23/212 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L +SGG D++  + W  + F   V     D GQ  +++         K+     
Sbjct: 1   MKEKVVLAYSGGLDTTAIIPWLKENFDYDVICCCIDCGQGEELDGLEERA---KLSGASK 57

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            + +++ ++               +    A  I +N         R  I        A +
Sbjct: 58  LYIENIIDEFCDDYI---------VPCVQANAIYENKYLLGTSMARPGIAKKLVEI-ARK 107

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G T I  G                  A +  I +       + T      + E  +  +
Sbjct: 108 EGATAICHGATGKGNDQIRFELGIKALAPDLKI-IAPWRMTDIWTMQ---SREEEIEYCK 163

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
             G    ++L  + SH+ Y   R+  +    G
Sbjct: 164 AHG----IDLPFDASHS-YSRDRNLWHISHEG 190


>gi|60680859|ref|YP_211003.1| tRNA-specific 2-thiouridylase MnmA [Bacteroides fragilis NCTC 9343]
 gi|253563325|ref|ZP_04840782.1| tRNA-specific 2-thiouridylase mnmA 2 [Bacteroides sp. 3_2_5]
 gi|265762789|ref|ZP_06091357.1| tRNA methyl transferase [Bacteroides sp. 2_1_16]
 gi|81316073|sp|Q5LFN5|MNMA2_BACFN RecName: Full=tRNA-specific 2-thiouridylase mnmA 2
 gi|60492293|emb|CAH07058.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides fragilis NCTC 9343]
 gi|251947101|gb|EES87383.1| tRNA-specific 2-thiouridylase mnmA 2 [Bacteroides sp. 3_2_5]
 gi|263255397|gb|EEZ26743.1| tRNA methyl transferase [Bacteroides sp. 2_1_16]
          Length = 353

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 49/181 (27%), Gaps = 7/181 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
            L SGG DSS  +    ++  +        G      ++C     + I       +    
Sbjct: 5   ALLSGGVDSSVVVHLLCEQGYKPTLFYIKIGMDGAEYMDCS--AEEDIELSTAIARRYGL 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
              ++ L    +   +     +    +        +  + I F  F   +     +T   
Sbjct: 63  ALEVVDLH--REYWDNVAAYAIEKIRKGQTPNPDVMCNKLIKFGCFEQQVGKDFDLTATG 120

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLAQDIGG 189
                    G            +    L    ++ V     P+  L K+E  ++A   G 
Sbjct: 121 HYATTLQLGGKTWLGTAKDPIKDQTDFLAQIDYLQVSKLLFPIGGLMKHEVREIALQAGL 180

Query: 190 Q 190
            
Sbjct: 181 P 181


>gi|118576679|ref|YP_876422.1| tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase
          [Cenarchaeum symbiosum A]
 gi|118195200|gb|ABK78118.1| tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase
          [Cenarchaeum symbiosum A]
          Length = 336

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 12/32 (37%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
          K    + L SGG DS   +     +   V  +
Sbjct: 5  KKKKVVALLSGGLDSQLAVKMMQKQGFEVSAV 36


>gi|332523636|ref|ZP_08399888.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus porcinus str. Jelinkova 176]
 gi|332314900|gb|EGJ27885.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus porcinus str. Jelinkova 176]
          Length = 373

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 50/194 (25%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D  K     ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MTD--KSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYALNLGADYVATGHYAQVERDSDGIVHMLRGVDNGKDQTYFLSQLSQEQLQKTLFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K +  ++A+  G
Sbjct: 174 LQKSQVREIAERAG 187


>gi|329910647|ref|ZP_08275342.1| Argininosuccinate synthase [Oxalobacteraceae bacterium IMCC9480]
 gi|327546132|gb|EGF31187.1| Argininosuccinate synthase [Oxalobacteraceae bacterium IMCC9480]
          Length = 410

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 44/157 (28%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W  D +   + T + D GQ  ++E         K    
Sbjct: 1   MSDIKKVVLAYSGGLDTSVILKWLPDNYQCEIVTFTADLGQGEELEP--ARQKALKFGIK 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                     +  +           + T      +   ++    +  R I     +    
Sbjct: 59  PENIHIDDVREEFV--RDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIARESGADT 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         +   Y    +  I A     +L
Sbjct: 117 ISHGATGKGNDQVRFELGAYALMPNVKIIAPWREWDL 153


>gi|290981496|ref|XP_002673466.1| glutamine amidotransferase [Naegleria gruberi]
 gi|284087050|gb|EFC40722.1| glutamine amidotransferase [Naegleria gruberi]
          Length = 558

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 55/195 (28%), Gaps = 24/195 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           ++   ++  SGG DSS           DR+  +  D G     E E    V +   + + 
Sbjct: 264 ESDHVVMALSGGVDSSVAAVLLQKAIGDRLHCIFVDNGLLRLNEFE---QVLETYRDSLH 320

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  E   L    L                +                     +    
Sbjct: 321 -LNVKGVEVSTLFYDALKG----------ESDPEKKRKIIGAKFIEVFEKEAQQISNVKH 369

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           LG   I   V E+            I++      L  + H+ V  PL  L K E  ++ +
Sbjct: 370 LGQGTIYPDVVESIGGAT-------IKSHHNVGGLPEKMHMKVVEPLRLLFKDEVRRVGK 422

Query: 186 DIGGQD--LVNLILE 198
           ++G  D  L+     
Sbjct: 423 ELGIPDNILLRHPFP 437


>gi|240849703|ref|YP_002971091.1| argininosuccinate synthase [Bartonella grahamii as4aup]
 gi|240266826|gb|ACS50414.1| argininosuccinate synthase [Bartonella grahamii as4aup]
          Length = 415

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 52/174 (29%), Gaps = 11/174 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +L +SGG D+S  L W        V T + D GQ    ELE      + +  +   + 
Sbjct: 9   KVVLAYSGGLDTSIILKWLQSTLGVEVVTFTADLGQ--GEELEFARRKAEMLG-VKEIYI 65

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           + L E+ +            + T      +   ++    +  R I         A   G 
Sbjct: 66  EDLREEFVRDFVF---PMFRANTVYEGTYLLGTSIARPLISKRLIEIAKETEADAIAHGA 122

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT----VHTPLMWLKKY 178
           T         + S Y       I A     +    + +     +H   +   K 
Sbjct: 123 TGKGNDQVRFELSAYALNPDIKIIAPWRDWDFKSRTDLFEFARIHQIPVEKDKQ 176


>gi|209551875|ref|YP_002283792.1| GMP synthase [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|226739711|sp|B5ZYE9|GUAA_RHILW RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|209537631|gb|ACI57566.1| GMP synthase, large subunit [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 520

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 53/184 (28%), Gaps = 17/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS       +   D++  +  D+G      L  +      +      +
Sbjct: 223 KRVICALSGGVDSSVAALLIHEAVGDQLTCILVDHG------LMRKDEAANVVAMFREHY 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              L          +G++   S         +        +              A  LG
Sbjct: 277 NLHLL-HVDASDRFIGELEGVSDP-------ETKRKIIGRLFIETFEEEAKKLGGADFLG 328

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   V E+    +      TI++      L     + +  PL  L K E   L +++
Sbjct: 329 QGTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMKMQLVEPLRELFKDEVRALGREL 386

Query: 188 GGQD 191
           G  D
Sbjct: 387 GLPD 390


>gi|52548840|gb|AAU82689.1| argininosuccinate synthase [uncultured archaeon GZfos19A5]
          Length = 388

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 55/204 (26%), Gaps = 14/204 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +L +SGG D+S C+    +   +D V  ++ + GQ  +   E +    K        
Sbjct: 2   KKVVLAYSGGLDTSVCIPLLKEHYGYDEVIAVTVNVGQPEEDIKEAKERGAKLSNSYREI 61

Query: 67  -WKDSLGEDHILPLAILGDISHSSL--TKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
             KD    D+I PL          +  T      I  + +        + +         
Sbjct: 62  DAKDEFVRDYIFPLIKANGNYEGYVLGTAIARPLIAKHVVEVAREEKADAVAHGCTGKGN 121

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            +L    +         +   +         E       E  + +     W      W  
Sbjct: 122 DQLRFDAVFRTTDLDVVAPMRELSL----TREEERKYAAEHGILLKPEHRWSVDENIWSR 177

Query: 184 ---AQDIGGQDLV--NLILEESHT 202
                ++     V    I   + +
Sbjct: 178 SIEGAELEQPSFVPPEEIFTWTVS 201


>gi|330999472|ref|ZP_08323186.1| argininosuccinate synthase [Parasutterella excrementihominis YIT
          11859]
 gi|329574898|gb|EGG56457.1| argininosuccinate synthase [Parasutterella excrementihominis YIT
          11859]
          Length = 445

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 28/72 (38%), Gaps = 3/72 (4%)

Query: 1  MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I+K  P      + FSGG D+ST L W   +       + + GQ ++ + E      
Sbjct: 1  METILKSLPIGEKVGIAFSGGLDTSTALLWMKKKGAFPCAYTANLGQPDEDDYEAIPRKA 60

Query: 58 KKIVELMPKWKD 69
                + +  D
Sbjct: 61 MDFGASIARLVD 72


>gi|303256132|ref|ZP_07342149.1| argininosuccinate synthase [Burkholderiales bacterium 1_1_47]
 gi|302861102|gb|EFL84176.1| argininosuccinate synthase [Burkholderiales bacterium 1_1_47]
          Length = 445

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 28/72 (38%), Gaps = 3/72 (4%)

Query: 1  MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I+K  P      + FSGG D+ST L W   +       + + GQ ++ + E      
Sbjct: 1  METILKSLPIGEKVGIAFSGGLDTSTALLWMKKKGAFPCAYTANLGQPDEDDYEAIPRKA 60

Query: 58 KKIVELMPKWKD 69
                + +  D
Sbjct: 61 MDFGASIARLVD 72


>gi|296171256|ref|ZP_06852660.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295894224|gb|EFG73981.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 358

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 45/182 (24%), Gaps = 6/182 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL-MPKWK 68
             L   SGG DSS   +  +D    V  +                    K       +  
Sbjct: 2   KILAAMSGGVDSSVAAARMVDAGHDVVGVHLALSSAPGALRTGSRGCCSKEDASDASRVA 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D LG    +      +   + +  +          PN  V     I     +  A  LG 
Sbjct: 62  DVLGIPFYVW--DFAERFQADVIDDFVSSYARGETPNPCVRCNQRIKFSALSAKALALGF 119

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYETWKLAQD 186
             +  G      SG    R       ++ +   + +    H         K +    A  
Sbjct: 120 DTVATGHYARL-SGGRLRRAVDHDKDQSYVLAVLTAEQLRHATFPIGDTPKAQIRAEAAR 178

Query: 187 IG 188
            G
Sbjct: 179 RG 180


>gi|261840049|gb|ACX99814.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Helicobacter pylori 52]
          Length = 342

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 48/176 (27%), Gaps = 15/176 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS       ++   +  +         ++L          ++   K  +
Sbjct: 2   KIAVLLSGGVDSSYSAYSLKEQGHELVGIY--------LKLHASEKKHDLYIKNAQKACE 53

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG    L +        S++        ++   PN       ++    A   A +LG  
Sbjct: 54  FLGIP--LEVLDFQKDFKSAVYDEFISAYEEGQTPNPCALCNPLMKFGLALDHALKLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            I  G                    T         L  E    +  PL  L K + 
Sbjct: 112 KIATGHYARIKEIDKVSYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDI 167


>gi|260888183|ref|ZP_05899446.1| GMP synthase [Selenomonas sputigena ATCC 35185]
 gi|330838474|ref|YP_004413054.1| GMP synthase (glutamine-hydrolyzing) [Selenomonas sputigena ATCC
           35185]
 gi|260862017|gb|EEX76517.1| GMP synthase [Selenomonas sputigena ATCC 35185]
 gi|329746238|gb|AEB99594.1| GMP synthase (glutamine-hydrolyzing) [Selenomonas sputigena ATCC
           35185]
          Length = 517

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 55/187 (29%), Gaps = 21/187 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            AL   SGG DSS            ++  +  D+G   K E +    V            
Sbjct: 221 KALCALSGGVDSSVAAVLLSKAIGKQLTCVFVDHGLLRKDEGDEVEAV------------ 268

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG- 127
              G +    L  +   +     + +    +               F+      A ++G 
Sbjct: 269 --FGAEGPYDLNFIRVDAKERFYEKLKGVTEPEKKRKII----GEEFIRVFEAEAKKIGK 322

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLAQD 186
           +  +V G    D       +   I++      L        +  PL  L K E  K  ++
Sbjct: 323 VDFLVQGTIYPDVIESGLGKSAVIKSHHNVGGLPDCVDFKEIVEPLRLLFKDEVRKAGRE 382

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 383 LGIPEYL 389


>gi|238926157|ref|ZP_04657917.1| GMP synthase (glutamine-hydrolyzing) [Selenomonas flueggei ATCC
           43531]
 gi|238885837|gb|EEQ49475.1| GMP synthase (glutamine-hydrolyzing) [Selenomonas flueggei ATCC
           43531]
          Length = 529

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 53/187 (28%), Gaps = 21/187 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            AL   SGG DSS            ++  +  D+G   K E +    V            
Sbjct: 233 RALCALSGGVDSSVAAVLLSKAIGSQLTCVFVDHGLLRKNEGDEVEAV------------ 280

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G D +  +  +   +       +    +               F+      A+ +G 
Sbjct: 281 --FGRDGVYDVNFIRINARDRFYARLKGVTEPEQKRKII----GEEFIRVFEEAAHEIGA 334

Query: 129 -TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLAQD 186
              +V G    D       +   I++      L        +  PL  L K E     ++
Sbjct: 335 VDFLVQGTIYPDVIESGLGKSAVIKSHHNVGGLPDHVDFKEIVEPLRLLFKDEVRAAGRE 394

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 395 LGIPDYL 401


>gi|115314034|ref|YP_762757.1| tRNA-specific 2-thiouridylase MnmA [Francisella tularensis subsp.
           holarctica OSU18]
 gi|254366943|ref|ZP_04982980.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Francisella tularensis subsp. holarctica 257]
 gi|115128933|gb|ABI82120.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Francisella tularensis subsp. holarctica OSU18]
 gi|134252770|gb|EBA51864.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Francisella tularensis subsp. holarctica 257]
          Length = 381

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 39/135 (28%), Gaps = 5/135 (3%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +I +    ++  SGG DSS        +   V  +     + +  +  C     + I + 
Sbjct: 21  VIMENKKVIVGISGGVDSSVSALLLKQQGYDVTGVFMKNWEEDDTDEFCS--AEQDIADA 78

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                        +           ++ ++  ++ +    PN  +     I      +  
Sbjct: 79  QAVCDSIGIPFKKIN---FTAEYWDNVFEHFLIEYKAGRTPNPDILCNKEIKFKAFLSYV 135

Query: 124 YRLGITNIVIGVCET 138
           + LG   I  G    
Sbjct: 136 HLLGGDYIATGHYAQ 150


>gi|21242742|ref|NP_642324.1| tRNA-specific 2-thiouridylase MnmA [Xanthomonas axonopodis pv.
           citri str. 306]
 gi|24638307|sp|Q8PL08|MNMA_XANAC RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|21108220|gb|AAM36860.1| tRNA methyltransferase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 378

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 46/188 (24%), Gaps = 11/188 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            P  ++  SGG DSS        + + +  L       +          R+  V +    
Sbjct: 3   TPRIVVGVSGGVDSSVAAWKLAQQGEPIAGLFMQNWADDGSGDCRAEDDRRDAVAVCGVL 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                               S + ++   +      PN  V     +        A  LG
Sbjct: 63  GIP------FHFRDFSGEYWSDVFEHFLAEYAAGRTPNPDVLCNREVKFKHFLDAAQALG 116

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G            R                 LG         P+  L+K    +
Sbjct: 117 AERIATGHYAQVAHRGGRWRLLRGADRGKDQSYFLHQLGQTQLAATLFPIGDLEKSTLRR 176

Query: 183 LAQDIGGQ 190
           +AQD G  
Sbjct: 177 IAQDAGLP 184


>gi|7022010|dbj|BAA91462.1| unnamed protein product [Homo sapiens]
          Length = 166

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/113 (11%), Positives = 29/113 (25%), Gaps = 9/113 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--------QRNKVELECRLCV 56
           ++     +   SGG DS+        R  +V  +                  + E    V
Sbjct: 1   MQALRHVVCALSGGVDSAVAALLLRRRGYQVTGVFMKNWDSLDEHGVCTADKDCEDAYRV 60

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
            + +     +    + E      +   +      T N  +    +   + F  
Sbjct: 61  CQILDIPFHQVS-YVKEYWNDVFSDFLNEYEKGRTPNPDIVCNKHIKFSCFFH 112


>gi|298293305|ref|YP_003695244.1| argininosuccinate synthase [Starkeya novella DSM 506]
 gi|296929816|gb|ADH90625.1| argininosuccinate synthase [Starkeya novella DSM 506]
          Length = 408

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 43/158 (27%), Gaps = 5/158 (3%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +       +L +SGG D+S  L W        V T + D GQ  ++E        + +  
Sbjct: 1   MANDVKKVVLAYSGGLDTSVILKWLQTTYGCEVVTFTADLGQGEELEP--ARRKAELLGI 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                      +  +   +       +      + +   ++    +  + I         
Sbjct: 59  KPENIFIEDVREEFVSEYVF--PMFRANALYEGLYLLGTSIARPLISKKQIEIARQVGAD 116

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         + S Y       + A      L
Sbjct: 117 AVAHGATGKGNDQVRFELSYYALEPEIKVIAPWREWEL 154


>gi|242237546|ref|YP_002985727.1| argininosuccinate synthase [Dickeya dadantii Ech703]
 gi|242129603|gb|ACS83905.1| argininosuccinate synthase [Dickeya dadantii Ech703]
          Length = 450

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 23/57 (40%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + E      K+      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYEAIPRRAKEYGAENARLID 72


>gi|134298155|ref|YP_001111651.1| argininosuccinate synthase [Desulfotomaculum reducens MI-1]
 gi|172044248|sp|A4J173|ASSY_DESRM RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|134050855|gb|ABO48826.1| argininosuccinate synthase [Desulfotomaculum reducens MI-1]
          Length = 401

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 9  PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCV 56
          P  +L +SGG D+S  ++W  +     V  ++ D GQ  ++       +
Sbjct: 2  PKVVLAYSGGLDTSVIIAWLKENYGYEVIAVTADLGQGEELAPLEEKAL 50


>gi|328676178|gb|AEB27048.1| tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Francisella cf. novicida Fx1]
          Length = 359

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 52/186 (27%), Gaps = 11/186 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +    ++  SGG DSS        +   V  +     + +  +  C     + I +    
Sbjct: 2   ENKKVIVGISGGVDSSVSALLLKQQGYDVTGVFMKNWEEDDTDEFCS--AEQDIADAQAV 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     +           ++ ++  ++ +    PN  +     I      +  + L
Sbjct: 60  CDSIGIPFKKIN---FAAEYWDNVFEHFLIEYKAGRTPNPDILCNKEIKFKAFLSYVHLL 116

Query: 127 GITNIVIGVCETDYSGYPDCRH------DTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           G   I  G                    D          LG E       P+  ++K + 
Sbjct: 117 GGDYIATGHYARTRVLEDGSVQLVKGLDDNKDQTYFLYTLGQEQLRQTIFPIGNIEKSKV 176

Query: 181 WKLAQD 186
            ++A++
Sbjct: 177 REIAKE 182


>gi|323694670|ref|ZP_08108832.1| argininosuccinate synthase [Clostridium symbiosum WAL-14673]
 gi|323501262|gb|EGB17162.1| argininosuccinate synthase [Clostridium symbiosum WAL-14673]
          Length = 416

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 49/162 (30%), Gaps = 14/162 (8%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNK---VELECRLCVRKK 59
           + KK    +L +SGG D+S  + W  +     V  +S D GQ  +   +E +       K
Sbjct: 1   MEKKYNKIVLAYSGGLDTSVLIPWLKENYGCEVVAVSADVGQGAELIGLEEKALKTGASK 60

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +   +   K    +++I+P    G              +   +     +  R +      
Sbjct: 61  L--YIEDLKKEFVDEYIIPTMKAGAAY--------ENYLLGTSFARPIIAKRIVEIAKKE 110

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
              A   G T         + +         + A      L 
Sbjct: 111 GADAICHGCTGKGNDQVRFELAIKAFAPSMDVIAPWRFWELN 152


>gi|295698551|ref|YP_003603206.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
          (tRNA(Ile)-2-lysyl-cytidine synthase) [Candidatus
          Riesia pediculicola USDA]
 gi|291157496|gb|ADD79941.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
          (tRNA(Ile)-2-lysyl-cytidine synthase) [Candidatus
          Riesia pediculicola USDA]
          Length = 454

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 25/71 (35%), Gaps = 8/71 (11%)

Query: 2  NDIIKKAPSALLLFSGGQDSSTCLSWAL------DRFDRVETLSFDYGQRNKVELECRLC 55
          +  +      L+ FSGG DS+  L   +           +  +  ++  + +  L     
Sbjct: 16 SKSLNPFKKVLVGFSGGMDSTVLLHILMTLRKLKKIKIDLRAIHINHHLQKESNLWESH- 74

Query: 56 VRKKIVELMPK 66
            KKI +L   
Sbjct: 75 -CKKICDLWKI 84


>gi|289191566|ref|YP_003457507.1| GMP synthase, large subunit [Methanocaldococcus sp. FS406-22]
 gi|288938016|gb|ADC68771.1| GMP synthase, large subunit [Methanocaldococcus sp. FS406-22]
          Length = 310

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 57/188 (30%), Gaps = 26/188 (13%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K   A++  SGG DSS           + +  +  D G   K E E          E+  
Sbjct: 20  KDRRAIIALSGGVDSSVAAVLTHKAIGNNLTAVFVDTGLMRKGERE----------EVER 69

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            ++D LG + I+                    ++    P         +F+     +A  
Sbjct: 70  TFRDKLGLNLIVV----------DAKDRFLEALKGVTDPEEKRKIIGKLFIDVFEEVAEE 119

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +    +V G                       + L     + V  PL  L K E   LA+
Sbjct: 120 IKAEVLVQGTIA-----PDWIETQGKIKSHHNVALPHGMVLEVVEPLRELYKDEVRLLAK 174

Query: 186 DIGGQDLV 193
           ++G  D +
Sbjct: 175 ELGLPDSI 182


>gi|218663753|ref|ZP_03519683.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Rhizobium etli IE4771]
          Length = 348

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 53/184 (28%), Gaps = 17/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS       +   D++  +  D+G      L  +      +      +
Sbjct: 51  KRVICALSGGVDSSVAALLIHEAVGDQLTCILVDHG------LMRKDEAANVVAMFREHY 104

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              L          +G++   S         +        +              A  LG
Sbjct: 105 NLHLL-HVDASDRFIGELEGVSDP-------ETKRKIIGRLFIETFEEEAKKLGGADFLG 156

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   V E+    +      TI++      L     + +  PL  L K E   L +++
Sbjct: 157 QGTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMKMQLVEPLRELFKDEVRALGREL 214

Query: 188 GGQD 191
           G  D
Sbjct: 215 GLPD 218


>gi|208780006|ref|ZP_03247349.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Francisella novicida FTG]
 gi|208744010|gb|EDZ90311.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Francisella novicida FTG]
          Length = 359

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 52/186 (27%), Gaps = 11/186 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +    ++  SGG DSS        +   V  +     + +  +  C     + I +    
Sbjct: 2   ENKKVIVGISGGVDSSVSALLLKQQGYDVTGVFMKNWEEDDTDEFCS--AEQDIADAQAV 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     +           ++ ++  ++ +    PN  +     I      +  + L
Sbjct: 60  CDSIGIPFKKIN---FAAEYWDNVFEHFLIEYKAGRTPNPDILCNKEIKFKAFLSYVHLL 116

Query: 127 GITNIVIGVCETDYSGYPDCRH------DTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           G   I  G                    D          LG E       P+  ++K + 
Sbjct: 117 GGDYIATGHYARTRVLEDGSVQLVKGLDDNKDQTYFLYTLGQEQLRQTIFPIGNIEKSKV 176

Query: 181 WKLAQD 186
            ++A++
Sbjct: 177 REIAKE 182


>gi|254168754|ref|ZP_04875596.1| NAD+ synthetase [Aciduliprofundum boonei T469]
 gi|289596848|ref|YP_003483544.1| NAD+ synthetase [Aciduliprofundum boonei T469]
 gi|197622380|gb|EDY34953.1| NAD+ synthetase [Aciduliprofundum boonei T469]
 gi|289534635|gb|ADD08982.1| NAD+ synthetase [Aciduliprofundum boonei T469]
          Length = 263

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 31/91 (34%), Gaps = 2/91 (2%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +A++  SGG DSST     +     D+V  +        K + E    V +K+      
Sbjct: 25  KNAVIGLSGGLDSSTVAFLCVKALGKDKVLGVHMPDSITPKEDKEDAKLVAEKLGIEFRT 84

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
            +     + +     L +   ++  K     
Sbjct: 85  IEIGEIVEKMNEKIKLKNEMSTANLKARIRM 115


>gi|195396114|ref|XP_002056677.1| GJ11071 [Drosophila virilis]
 gi|194143386|gb|EDW59789.1| GJ11071 [Drosophila virilis]
          Length = 417

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 2/61 (3%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +L +SGG D+S  L W L++   V  +  D GQ  + + E       KI        
Sbjct: 4  EKVILAYSGGLDTSCILKWLLEQRYEVICVLADVGQ--QEDFEAARQKALKIGAKEVIVA 61

Query: 69 D 69
          D
Sbjct: 62 D 62


>gi|167010288|ref|ZP_02275219.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Francisella tularensis subsp. holarctica FSC200]
          Length = 378

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 39/135 (28%), Gaps = 5/135 (3%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +I +    ++  SGG DSS        +   V  +     + +  +  C     + I + 
Sbjct: 18  VIMENKKVIVGISGGVDSSVSALLLKQQGYDVTGVFMKNWEEDDTDEFCS--AEQDIADA 75

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                        +           ++ ++  ++ +    PN  +     I      +  
Sbjct: 76  QAVCDSIGIPFKKIN---FTAEYWDNVFEHFLIEYKAGRTPNPDILCNKEIKFKAFLSYV 132

Query: 124 YRLGITNIVIGVCET 138
           + LG   I  G    
Sbjct: 133 HLLGGDYIATGHYAQ 147


>gi|126297761|ref|XP_001364691.1| PREDICTED: similar to Prmd14 [Monodelphis domestica]
          Length = 412

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 21/48 (43%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
          +    + +L +SGG D+S  L W  ++   V     + GQ+   E   
Sbjct: 1  MSGKGTVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48


>gi|118496723|ref|YP_897773.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Francisella tularensis subsp. novicida U112]
 gi|194324030|ref|ZP_03057805.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Francisella tularensis subsp. novicida FTE]
 gi|166234853|sp|A0Q454|MNMA_FRATN RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|118422629|gb|ABK89019.1| tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Francisella novicida U112]
 gi|194321927|gb|EDX19410.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Francisella tularensis subsp. novicida FTE]
          Length = 359

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 52/186 (27%), Gaps = 11/186 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +    ++  SGG DSS        +   V  +     + +  +  C     + I +    
Sbjct: 2   ENKKVIVGISGGVDSSVSALLLKQQGYDVTGVFMKNWEEDDTDEFCS--AEQDIADAQAV 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     +           ++ ++  ++ +    PN  +     I      +  + L
Sbjct: 60  CDSIGIPFKKIN---FAAEYWDNVFEHFLIEYKAGRTPNPDILCNKEIKFKAFLSYVHLL 116

Query: 127 GITNIVIGVCETDYSGYPDCRH------DTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           G   I  G                    D          LG E       P+  ++K + 
Sbjct: 117 GGDYIATGHYARTRVLEDGSVQLVKGLDDNKDQTYFLYTLGQEQLRQTIFPIGNIEKSKV 176

Query: 181 WKLAQD 186
            ++A++
Sbjct: 177 REIAKE 182


>gi|91772881|ref|YP_565573.1| argininosuccinate synthase [Methanococcoides burtonii DSM 6242]
 gi|119361289|sp|Q12XK3|ASSY_METBU RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|91711896|gb|ABE51823.1| Argininosuccinate synthase [Methanococcoides burtonii DSM 6242]
          Length = 394

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 58/203 (28%), Gaps = 10/203 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVE-- 62
            +    L +SGG D+S C+    +   +D V T++ D GQ  K ++       KKI +  
Sbjct: 1   MSKKVALAYSGGLDTSICIPLLKEEYGYDEVITVAVDVGQ-PKEDVAQAEEKAKKISDKH 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                ++    D+I PL          +      +                + L    T 
Sbjct: 60  FTLDVREEFVNDYIFPLIRANGDYEGYVMGTSIARPLIAKKVVEIAEQEGAVALAHGCTG 119

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
                +    +          P    +  R  E          V V T   W      W 
Sbjct: 120 KGNDQLRFEAVFRLTDMDVIAPMREMNLTREWEIEYAKEHGIPVGVTTAKPWSVDENIWS 179

Query: 183 LAQDIG-----GQDLVNLILEES 200
            + + G     G      I + +
Sbjct: 180 RSIEGGKLEDPGYIPPEEIYKWT 202


>gi|86355954|ref|YP_467846.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Rhizobium etli CFN 42]
 gi|123513305|sp|Q2KDG7|GUAA_RHIEC RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|86280056|gb|ABC89119.1| GMP synthase - glutamine amidotransferase protein [Rhizobium etli
           CFN 42]
          Length = 520

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 53/184 (28%), Gaps = 17/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS       +   D++  +  D+G      L  +      +      +
Sbjct: 223 KRVICALSGGVDSSVAALLIHEAVGDQLTCILVDHG------LMRKDEAANVVAMFREHY 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              L          +G++   S         +        +              A  LG
Sbjct: 277 NLHLL-HVDASDRFIGELEGVSDP-------ETKRKIIGRLFIETFEEEAKKLGGADFLG 328

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   V E+    +      TI++      L     + +  PL  L K E   L +++
Sbjct: 329 QGTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMKMQLVEPLRELFKDEVRALGREL 386

Query: 188 GGQD 191
           G  D
Sbjct: 387 GLPD 390


>gi|29830022|ref|NP_824656.1| GMP synthase [Streptomyces avermitilis MA-4680]
 gi|44887993|sp|Q82HM9|GUAA_STRAW RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|29607132|dbj|BAC71191.1| putative GMP synthase [Streptomyces avermitilis MA-4680]
          Length = 525

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/187 (11%), Positives = 49/187 (26%), Gaps = 14/187 (7%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              A+   SGG DS+   +        ++  +  D+G   + E E               
Sbjct: 223 TRRAICGLSGGVDSAVAAALVQKAIGSQLTCVYVDHGLMRQGETEQVEK---------DF 273

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +  +  ++      +    +  K V+   +   +                       
Sbjct: 274 VAATGVQLKVVD----AEERFLTALKGVSDPEEKRKIIGREFIRVFEQAQAEIIADEGPE 329

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +               I++      L  +    +  PL  L K E   + Q+
Sbjct: 330 VAFLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPEDLEFELIEPLRKLFKDEVRMVGQE 389

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 390 LGLPDEI 396


>gi|332363581|gb|EGJ41362.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus sanguinis SK1059]
          Length = 373

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 51/194 (26%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+D  K     ++  SGG DSS       ++   V  +         ++        +  
Sbjct: 1   MSDNSKI--RVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDD--IDEFGVCTATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 114 DYALTLGADYVATGHYAQVKRDQDGLVHMLRGKDNNKDQTYFLSQLSQEQLQKTMFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E   +A+  G
Sbjct: 174 LEKPEVRAIAERAG 187


>gi|307719682|ref|YP_003875214.1| argininosuccinate synthase [Spirochaeta thermophila DSM 6192]
 gi|306533407|gb|ADN02941.1| argininosuccinate synthase [Spirochaeta thermophila DSM 6192]
          Length = 421

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 64/198 (32%), Gaps = 8/198 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +K+    +L +SGG D+S  + W  ++     V  +  D GQ+   E      +     +
Sbjct: 1   MKEIKKIVLAYSGGLDTSIIIPWLKEQYPGCEVVAVCTDVGQKEDWEALKEKALASGASK 60

Query: 63  LM-PKWKDSLGEDHILPLAILGDISHSSLT--KNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +     K+ L  D+I P+   G I         ++A  +Q        +           
Sbjct: 61  IYVLDVKEELVRDYIFPMLRAGAIYEGKYLLGTSIARPLQAKKQVEIALKEGADAVAHGC 120

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLK 176
                      +               R   IR+ E AI    +  +    +    ++ +
Sbjct: 121 TGKGNDQVRFELTYKALAPHLEIIAPWRMWDIRSREQAIEYAQKHGIPLGTISKKNIYSR 180

Query: 177 KYETWKLAQDIGGQDLVN 194
            +  W ++ + G  + + 
Sbjct: 181 DWNIWHISHEGGVLEDLW 198


>gi|217968149|ref|YP_002353655.1| PP-loop domain protein [Dictyoglomus turgidum DSM 6724]
 gi|217337248|gb|ACK43041.1| PP-loop domain protein [Dictyoglomus turgidum DSM 6724]
          Length = 268

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 9  PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             ++ +SGG DS+  L  A D   D V  ++       + E++    + +++       
Sbjct: 16 KKVVVAYSGGVDSTFLLKVAKDTLGDNVLAVTLISPIFPEREIKEAKRIAEELGVRHIIL 75

Query: 68 KDSLGEDH 75
          K+     H
Sbjct: 76 KNDELLKH 83


>gi|161353441|ref|NP_223972.2| tRNA-specific 2-thiouridylase MnmA [Helicobacter pylori J99]
 gi|205371768|sp|Q9ZJQ0|MNMA_HELPJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 342

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 48/176 (27%), Gaps = 15/176 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS       ++   +  +         ++L          ++   K  +
Sbjct: 2   KIAVLLSGGVDSSYSAYSLKEQGHELVGIY--------LKLHASEKKHDLYIKNAQKACE 53

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG    L +        S++        ++   PN       ++    A   A +LG  
Sbjct: 54  FLGIP--LEVLDFQKDFKSAVYDEFINAYEEGQTPNPCALCNPLMKFGLALDHALKLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            I  G                    T         L  E    +  PL  L K + 
Sbjct: 112 KIATGHYARVKEIDKVSYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDI 167


>gi|163790364|ref|ZP_02184796.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Carnobacterium sp. AT7]
 gi|159874435|gb|EDP68507.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Carnobacterium sp. AT7]
          Length = 374

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 44/194 (22%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS        +   V  +             C     +  
Sbjct: 1   MQD--NSKTRVVVGMSGGVDSSVTALVLKQQGYDVVGIFMKNWDDTDEFGMC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +             T  +    +        +     I      
Sbjct: 57  NDVALVANQIGIPYYSIN--FEKQYWDKVFTYFLEEYKKGRTPNPDVMC-NKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMW 174
             A  LG   +  G             H                 L  E       PL  
Sbjct: 114 DYAIELGADYVATGHYAQVERDENGVTHMLRGVDNNKDQTYFLNQLSQEQLAKTLFPLGG 173

Query: 175 LKKYETWKLAQDIG 188
           ++K E  ++A++ G
Sbjct: 174 MQKPEVRRIAEEAG 187


>gi|145641507|ref|ZP_01797085.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus influenzae R3021]
 gi|145273798|gb|EDK13666.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus influenzae 22.4-21]
          Length = 362

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 36/134 (26%), Gaps = 4/134 (2%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +    +   SGG DSS        +  +VE L        + + +   C     +     
Sbjct: 2   RQKKVICGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQA 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D LG   +  +    +   +     +             +  + I F  F    A  L
Sbjct: 59  VCDKLG-IKLHKINFAAEYWDNVFEHFLTEYKAGRTPNPDILCNKEIKFKAFLEYAAEDL 117

Query: 127 GITNIVIGVCETDY 140
           G   I  G      
Sbjct: 118 GADYIATGHYVRRT 131


>gi|329667542|gb|AEB93490.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus johnsonii DPC 6026]
          Length = 375

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 49/192 (25%), Gaps = 12/192 (6%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           ++  +    ++  SGG DSS        +   V  +             C     +   +
Sbjct: 1   MVDNSKIRVVVGMSGGVDSSVSALLLKQQGFDVVGVFMKNWDDTDDSGVC--TATEDYED 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +     +     + +            + +    + +    PN  V     I        
Sbjct: 59  VKKVADEIGIPYYSIN---FEKDYWERVFEYFLDEYKKGRTPNPDVMCNKEIKFKSFLDF 115

Query: 123 AYRLGITNIVIGVCETDY----SGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLK 176
           A  L    I +G                R       +T     L  +    V  PL  L 
Sbjct: 116 AMDLDADYIAMGHYAATRVDDNGVVHMMRPKDGNKDQTYFLSQLSQDQLKKVIFPLANLT 175

Query: 177 KYETWKLAQDIG 188
           K +  ++A   G
Sbjct: 176 KPQVREIAIASG 187


>gi|317014725|gb|ADU82161.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter pylori
           Gambia94/24]
          Length = 342

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 50/176 (28%), Gaps = 15/176 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS       ++   +  +         ++L          ++   K  +
Sbjct: 2   KIAVLLSGGVDSSYSAYSLKEQGHELVGIY--------LKLHASEKKHDLYIKNAQKACE 53

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG    L +        S++        ++   PN       ++    A   A +LG  
Sbjct: 54  FLGIP--LEVLDFQKDFKSAVYDEFISAYEEGQTPNPCALCNPLMKFGLALDHALQLGCE 111

Query: 130 NIVIGVCET-----DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            I  G           S   +    T         L  E    +  PL  L K + 
Sbjct: 112 KIATGHYARVKEIDRVSYIQEAVDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDI 167


>gi|291278885|ref|YP_003495720.1| GMP synthase glutamine-hydrolyzing [Deferribacter desulfuricans
           SSM1]
 gi|290753587|dbj|BAI79964.1| GMP synthase, glutamine-hydrolyzing [Deferribacter desulfuricans
           SSM1]
          Length = 517

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 50/184 (27%), Gaps = 18/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS       +     +  +  + G   K E      V K   +     
Sbjct: 221 KKVLCALSGGVDSSVVAVLLNEAIGKNLTCVFVNNGLLRKNE---AEQVVKTFRDNFNIN 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G         +   K +        +  R    L     LA    
Sbjct: 278 LIFVDAEEEFLKALRG-------VTDPEKKRKIIGNLFIKIFEREAEKLGRFDFLAQG-- 328

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    +   S        TI+       L  + +  +  PL  L K E  ++  ++
Sbjct: 329 -----TLYPDVIESVSFKGPSATIKTHHNVGGLPEKMNFKLIEPLRELFKDEVRQVGLEL 383

Query: 188 GGQD 191
           G  +
Sbjct: 384 GLPE 387


>gi|268319690|ref|YP_003293346.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus johnsonii FI9785]
 gi|262398065|emb|CAX67079.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus johnsonii FI9785]
          Length = 375

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 49/192 (25%), Gaps = 12/192 (6%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           ++  +    ++  SGG DSS        +   V  +             C     +   +
Sbjct: 1   MVDNSKIRVVVGMSGGVDSSVSALLLKQQGFDVVGVFMKNWDDTDDSGVC--TATEDYED 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +     +     + +            + +    + +    PN  V     I        
Sbjct: 59  VKKVADEIGIPYYSIN---FEKDYWERVFEYFLDEYKKGRTPNPDVMCNKEIKFKSFLDF 115

Query: 123 AYRLGITNIVIGVCETDY----SGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLK 176
           A  L    I +G                R       +T     L  +    V  PL  L 
Sbjct: 116 AMDLDADYIAMGHYAATRVDDNGVVHMMRPKDGNKDQTYFLSQLSQDQLKKVIFPLANLT 175

Query: 177 KYETWKLAQDIG 188
           K +  ++A   G
Sbjct: 176 KPQVREIAIASG 187


>gi|146337407|ref|YP_001202455.1| argininosuccinate synthase [Bradyrhizobium sp. ORS278]
 gi|226729212|sp|A4YJX9|ASSY_BRASO RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|146190213|emb|CAL74205.1| argininosuccinate synthetase [Bradyrhizobium sp. ORS278]
          Length = 448

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 3/72 (4%)

Query: 1  MNDIIK---KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I+K         + FSGG D+S  L W   +  R    + + GQ ++ + +      
Sbjct: 1  MTTILKGLPTGEKVGIAFSGGLDTSAALLWMKQKGARCFAYTANLGQPDESDYDEIPRKA 60

Query: 58 KKIVELMPKWKD 69
                  +  D
Sbjct: 61 MSFGAEKARLVD 72


>gi|42518912|ref|NP_964842.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus johnsonii NCC 533]
 gi|73920127|sp|Q74JW9|MNMA_LACJO RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|41583198|gb|AAS08808.1| probable tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus johnsonii NCC 533]
          Length = 375

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 49/192 (25%), Gaps = 12/192 (6%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           ++  +    ++  SGG DSS        +   V  +             C     +   +
Sbjct: 1   MVDNSKIRVVVGMSGGVDSSVSALLLKQQGFDVVGVFMKNWDDTDDSGVC--TATEDYED 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +     +     + +            + +    + +    PN  V     I        
Sbjct: 59  VKKVADEIGIPYYSIN---FEKDYWERVFEYFLDEYKKGRTPNPDVMCNKEIKFKSFLDF 115

Query: 123 AYRLGITNIVIGVCETDY----SGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLK 176
           A  L    I +G                R       +T     L  +    V  PL  L 
Sbjct: 116 AMDLDADYIAMGHYAATRVDDNGVVHMMRPKDGNKDQTYFLSQLSQDQLKKVIFPLANLT 175

Query: 177 KYETWKLAQDIG 188
           K +  ++A   G
Sbjct: 176 KPQVREIAIASG 187


>gi|308062619|gb|ADO04507.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter pylori Cuz20]
          Length = 342

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 48/176 (27%), Gaps = 15/176 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS       ++   +  +         ++L          ++   K  +
Sbjct: 2   KIAVLLSGGVDSSYSAYSLKEQGHELVGIY--------LKLHASEKKHDLYIKNAQKACE 53

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG    L +        S++        ++   PN       ++    A   A +LG  
Sbjct: 54  FLGIP--LEVLDFQKDFKSAVYDEFISAYEEGQTPNPCALCNPLMKFGLALDHALKLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            I  G                    T         L  E    +  PL  L K + 
Sbjct: 112 KIATGHYARVKEIDRVSYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDI 167


>gi|290559553|gb|EFD92882.1| hypothetical protein BJBARM5_0389 [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
          Length = 333

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 58/211 (27%), Gaps = 23/211 (10%)

Query: 16  SGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED- 74
           SGG+DSS  L        +    +FD G     E      V K +             + 
Sbjct: 62  SGGKDSSAMLYTLKKMGFKPLAFTFDIGYYPMHEFSRARAVAKTLGVDYEVIDIRKYLNR 121

Query: 75  ------------------HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
                             H L               ++        +    +  R +I  
Sbjct: 122 NDVNAYRRTAELYSKRCSHELSEEFRRIYLDERRYYSIKSSSSLPVVRTCQLCRRAVIRG 181

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
            ++     ++ +  + I         Y D R     ++        E  V V      L+
Sbjct: 182 YYSEAKKRKIPLVALAINEWAGLSQDYHDKRGYVFSSMRRLKPSIKEGPVHVVHVPFMLR 241

Query: 177 K--YETWKLAQDIGG--QDLVNLILEESHTC 203
           +   ET ++ + IG        LI   S++C
Sbjct: 242 RKLSETRQILKKIGWNLPQGEELIESNSNSC 272


>gi|261880940|ref|ZP_06007367.1| argininosuccinate synthase [Prevotella bergensis DSM 17361]
 gi|270332327|gb|EFA43113.1| argininosuccinate synthase [Prevotella bergensis DSM 17361]
          Length = 412

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 54/195 (27%), Gaps = 11/195 (5%)

Query: 7   KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                ++ FSGG D S T +  A      V     + G  +  +L+       K+     
Sbjct: 14  MKKKVVVAFSGGLDTSYTVMKLA-HDGWDVYAACANTGGFSAEQLKTNEENAYKLGATKY 72

Query: 66  KWKDSLGE--DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              D   E  +  L   I G++  ++      + +    +       R    +   A   
Sbjct: 73  ATLDVTQEYYEKSLKYMIFGNVLRNNC---YPISVSSERIFQAIAIARYANEIGADAIAH 129

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK----YE 179
              G  N  I    T     P     T+             ++  H       K    Y 
Sbjct: 130 GSTGAGNDQIRFDMTFLVMAPGVEIITLTRDHALSRQEEVDYLNAHGFKADFTKLKYSYN 189

Query: 180 TWKLAQDIGGQDLVN 194
                  I G +L++
Sbjct: 190 VGIWGTSICGGELLD 204


>gi|167564053|ref|ZP_02356969.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia oklahomensis EO147]
          Length = 409

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 30/131 (22%), Gaps = 5/131 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS       ++   V  L     + +     C         + +   
Sbjct: 3   KRRVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQ-----DWIDVV 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +      +            +      +      PN  V     I        A  LG
Sbjct: 58  SVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLG 117

Query: 128 ITNIVIGVCET 138
              I  G    
Sbjct: 118 ARTIATGHYAR 128


>gi|315656315|ref|ZP_07909206.1| exopolyphosphatase [Mobiluncus curtisii subsp. holmesii ATCC 35242]
 gi|315493317|gb|EFU82917.1| exopolyphosphatase [Mobiluncus curtisii subsp. holmesii ATCC 35242]
          Length = 528

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 59/184 (32%), Gaps = 11/184 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DSS   +       D++  +  D+G     E   R  V +     M     
Sbjct: 226 VICGLSGGVDSSVAAALVHKAIGDQLTCIFVDHGLLRAGE---REQVERDYAANMGIRVK 282

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            + E        LG ++  S  +     I    + +     R ++  V A+    +    
Sbjct: 283 YVDESAR----FLGALAGVSEPEKKRKIIGREFIRSFEAAQREVVAEVGASGGEVK---F 335

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +    +  PL  L K E  +L + +G 
Sbjct: 336 LVQGTLYPDVVESGGGSGTANIKSHHNVGGLPEDLKFELIEPLRKLFKDEVRELGRQLGL 395

Query: 190 QDLV 193
            D++
Sbjct: 396 PDVI 399


>gi|253996656|ref|YP_003048720.1| tRNA(Ile)-lysidine synthetase [Methylotenera mobilis JLW8]
 gi|253983335|gb|ACT48193.1| tRNA(Ile)-lysidine synthetase [Methylotenera mobilis JLW8]
          Length = 500

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 16/52 (30%), Gaps = 4/52 (7%)

Query: 8   APSALLLFSGGQDSSTCLSWAL----DRFDRVETLSFDYGQRNKVELECRLC 55
            P  LL  SGG DS+  L             +  L   +G     +     C
Sbjct: 76  PPRLLLALSGGLDSAVLLHLLAGLRSSLGFELYALHVHHGLSPNADAWAAWC 127


>gi|224418922|ref|ZP_03656928.1| guanosine monophosphate synthetase GuaA [Helicobacter canadensis
           MIT 98-5491]
 gi|253827873|ref|ZP_04870758.1| GMP synthase [Helicobacter canadensis MIT 98-5491]
 gi|313142437|ref|ZP_07804630.1| GMP synthase [Helicobacter canadensis MIT 98-5491]
 gi|253511279|gb|EES89938.1| GMP synthase [Helicobacter canadensis MIT 98-5491]
 gi|313131468|gb|EFR49085.1| GMP synthase [Helicobacter canadensis MIT 98-5491]
          Length = 727

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 48/188 (25%), Gaps = 15/188 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K    L   SGG DSS   +       + +  +  D G   K E E    + +       
Sbjct: 426 KPHKVLCAVSGGVDSSVVATLLYRAIGENLIPIFVDTGLLRKGEREAVEKMFR------- 478

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  E+  +PL  +                +           +              
Sbjct: 479 -------ENLRVPLITIDASEEFLGLLKGVRDPESKRKIIGETFIKVFDGEAKKHNANGE 531

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +          +   S        TI++      L       +  PL  L K E   L +
Sbjct: 532 IKFLAQGTLYPDVIESVSVKGPSKTIKSHHNVGGLPDWMKFELIEPLRELFKDEVRALGR 591

Query: 186 DIGGQDLV 193
           ++G  + +
Sbjct: 592 ELGMPESM 599


>gi|116334036|ref|YP_795563.1| tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase,
           PP-loop ATPase [Lactobacillus brevis ATCC 367]
 gi|122269280|sp|Q03QJ0|MNMA_LACBA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|116099383|gb|ABJ64532.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase, PP-loop ATPase [Lactobacillus brevis
           ATCC 367]
          Length = 375

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 47/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS        +   V  +             C     +  
Sbjct: 1   MQD--NSQTRVVVGMSGGVDSSVVALRLKQQGYDVIGVFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            +      + +    PN  V     I      
Sbjct: 57  KDVAKVAAKIGIPYYSVN---FEKEYWDRVFTYFLDEYKKGRTPNPDVICNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A  LG   I  G             H      +          L  E    V  P+  
Sbjct: 114 DYALELGADYIATGHYAQLTRDEAGHAHLMRAVDQNKDQTYFLSQLSTEQLDRVMFPIGD 173

Query: 175 LKKYETWKLAQDIG 188
           L K +  ++A++ G
Sbjct: 174 LVKPQVREIAKEAG 187


>gi|26990719|ref|NP_746144.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas putida KT2440]
 gi|37999625|sp|Q88FR9|MNMA_PSEPK RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|24985713|gb|AAN69608.1|AE016594_5 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudomonas putida KT2440]
          Length = 374

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 48/186 (25%), Gaps = 10/186 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS      +++  +VE L     + +     C    R+ + +     
Sbjct: 11  KTRVIVGMSGGVDSSVSALLLIEQGYQVEGLFMKNWEEDDGTEYC--TAREDLADAQAVC 68

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                + H        +   +     +             +  R  I        A  LG
Sbjct: 69  DRIGIKLHT--ANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFKAFLDYALSLG 125

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G                              +G +       P+  L+K E   
Sbjct: 126 ADLIATGHYVRRRDTGALTELLKGLDPNKDQSYFLHAVGGQEIARTLFPVGELEKPEVRA 185

Query: 183 LAQDIG 188
           +A+  G
Sbjct: 186 IAEKHG 191


>gi|27379100|ref|NP_770629.1| GMP synthase [Bradyrhizobium japonicum USDA 110]
 gi|44887956|sp|Q89N53|GUAA_BRAJA RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|27352250|dbj|BAC49254.1| GMP synthase [Bradyrhizobium japonicum USDA 110]
          Length = 551

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 66/190 (34%), Gaps = 25/190 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DS+       +   D++  +  D+G     E        +++V+L   
Sbjct: 253 KGKVICGLSGGVDSAVAAVLIHEAIGDQLTCVFVDHGLMRLNE-------AEQVVDLFRH 305

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   + +PL       H   +K    +++    P T       +F+      A ++
Sbjct: 306 -------HYNIPL------VHVDASKQFLGELEGVTDPETKRKTIGRLFIEVFEAEAKKI 352

Query: 127 GITNIVI----GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           G  + +          +   +      TI++      L    ++ +  PL  L K E  K
Sbjct: 353 GGADFLAQGTLYPDVIESVSFTGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRK 412

Query: 183 LAQDIGGQDL 192
           L +++G  ++
Sbjct: 413 LGRELGLPEI 422


>gi|148547054|ref|YP_001267156.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas putida F1]
 gi|166235073|sp|A5W1G2|MNMA_PSEP1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|148511112|gb|ABQ77972.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudomonas putida F1]
          Length = 374

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 48/186 (25%), Gaps = 10/186 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS      +++  +VE L     + +     C    R+ + +     
Sbjct: 11  KTRVIVGMSGGVDSSVSALLLIEQGYQVEGLFMKNWEEDDGTEYC--TAREDLADAQAVC 68

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                + H        +   +     +             +  R  I        A  LG
Sbjct: 69  DRIGIKLHT--ANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFKAFLDYALSLG 125

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G                              +G +       P+  L+K E   
Sbjct: 126 ADLIATGHYVRRRDTGALTELLKGLDPNKDQSYFLHAVGGQEIARTLFPVGELEKPEVRA 185

Query: 183 LAQDIG 188
           +A+  G
Sbjct: 186 IAEKHG 191


>gi|326793643|ref|YP_004311463.1| GMP synthase (glutamine-hydrolyzing) [Marinomonas mediterranea
           MMB-1]
 gi|326544407|gb|ADZ89627.1| GMP synthase (glutamine-hydrolyzing) [Marinomonas mediterranea
           MMB-1]
          Length = 525

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 52/185 (28%), Gaps = 19/185 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMP 65
               LL  SGG DSS   +       D++  +  D G  R     +      + +   + 
Sbjct: 227 NKKVLLALSGGVDSSVVAALLHKAIGDKLTCVFVDNGLLRLDEGDQVMSMFAENMGVNVI 286

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +          L L  L  ++     + +      +          ++ FL         
Sbjct: 287 RVDAED-----LFLGKLAGVADPEQKRKIIGNTFIDIFDEEAAKLTDVDFLAQGTIY--- 338

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                        + +     +   I++      L  +    +  PL  L K E  KL  
Sbjct: 339 ---------PDVIESAASKTGKAHVIKSHHNVGGLPEDMQFELVEPLRELFKDEVRKLGV 389

Query: 186 DIGGQ 190
           ++G  
Sbjct: 390 ELGLP 394


>gi|217033651|ref|ZP_03439079.1| hypothetical protein HP9810_899g87 [Helicobacter pylori 98-10]
 gi|216943997|gb|EEC23431.1| hypothetical protein HP9810_899g87 [Helicobacter pylori 98-10]
          Length = 342

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 48/176 (27%), Gaps = 15/176 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS       ++   +  +         ++L          ++   K  +
Sbjct: 2   KIAVLLSGGVDSSYSAYSLKEQGHELVGIY--------LKLHASEKKHDLYIKNAQKACE 53

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG    L +        S++        ++   PN       ++    A   A +LG  
Sbjct: 54  FLGIP--LEVLDFQKDFKSAVYDEFISAYEEGQTPNPCALCNPLMKFGLALDHALKLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            I  G                    T         L  E    +  PL  L K + 
Sbjct: 112 KIATGHYARVKEIDKVSYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDI 167


>gi|220917573|ref|YP_002492877.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219955427|gb|ACL65811.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 351

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 44/183 (24%), Gaps = 7/183 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DSST  +        V  ++      + V      C    + +     + 
Sbjct: 2   RILVAMSGGVDSSTAAALLAGHGHEVIGVTMRVADYSDVARGRSCCAPDDVEDARAAARR 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                ++  +          +         +   PN  V     +   +    A  LG  
Sbjct: 62  LGIPFYVANV---EARFRERVIDRFVDDYVEGRTPNPCVACNTEVKFDWLLARARALGAK 118

Query: 130 ----NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
               +                             LG ++   V  P+  L K      A 
Sbjct: 119 LATGHYARVEERGGRRALLTAADPAKDQSYFLYGLGQDALRDVLFPVGALAKPVVRAEAA 178

Query: 186 DIG 188
             G
Sbjct: 179 RAG 181


>gi|89100241|ref|ZP_01173108.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Bacillus sp. NRRL B-14911]
 gi|89085091|gb|EAR64225.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Bacillus sp. NRRL B-14911]
          Length = 517

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 223 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AESVMKTFSEGFNMN 279

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       L  L  +S     + +                 N    VF    A   G
Sbjct: 280 VIKVDAKDRF-LNKLKGVSDPEQKRKI---------------IGNEFIYVFDDEAAKLEG 323

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 324 IEFLAQGTLYTDIIESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGTEL 383

Query: 188 GGQDLV 193
           G  D V
Sbjct: 384 GIADEV 389


>gi|328463846|gb|EGF35386.1| GMP synthase [Lactobacillus helveticus MTCC 5463]
          Length = 516

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 61/204 (29%), Gaps = 30/204 (14%)

Query: 1   MNDIIKKA----------PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVE 49
           MND I                +L  SGG DSS   +       D++  +  D+G   K E
Sbjct: 204 MNDFIDMKVDDIRKEVGDKKVILGLSGGVDSSVTATLLHKAIGDQLTAIFVDHGMLRKDE 263

Query: 50  LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
            +    V + + + +      +       L  L  ++     + +  K            
Sbjct: 264 GD---QVMQALNKDLGVNIIRVNAQKRF-LDKLKGVTDPEQKRKIIGKEFIEVFNEEAKK 319

Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
            +++ FL         +                       TI++      L  + H  + 
Sbjct: 320 LKDVKFLAQGTLYTDVIE---------------SGTNTAQTIKSHHNVGGLPKDMHFKLI 364

Query: 170 TPLMWLKKYETWKLAQDIGGQDLV 193
            PL  L K E  +L + +G    +
Sbjct: 365 EPLRKLFKDEVRELGERLGIPHDL 388


>gi|317060651|ref|ZP_07925136.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Fusobacterium sp. D12]
 gi|313686327|gb|EFS23162.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Fusobacterium sp. D12]
          Length = 332

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 8/59 (13%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVET---LSFDYGQRNKVELECRLCV 56
          M+ I      AL LFSGG DS+  +    ++   V     +S  +G  N+        +
Sbjct: 1  MSRI-----KALALFSGGLDSALAIKIVQEQGIEVIALNFVSHFFGGVNEKAEYMAKQL 54


>gi|308174451|ref|YP_003921156.1| tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Bacillus amyloliquefaciens DSM 7]
 gi|307607315|emb|CBI43686.1| tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Bacillus amyloliquefaciens DSM 7]
 gi|328912774|gb|AEB64370.1| tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Bacillus amyloliquefaciens LL3]
          Length = 371

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 50/190 (26%), Gaps = 12/190 (6%)

Query: 4   IIKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           + K+      ++  SGG DSS       ++   V  +             C     +   
Sbjct: 1   MEKRPEDTRVVVGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGFC--TATEDYE 58

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +++          + +            + +    + +    PN  V     I       
Sbjct: 59  DVIRVCNQIGIPYYAVN---FEKQYWEKVFQYFLDEYKAGRTPNPDVMCNKEIKFKAFLD 115

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRH-----DTIRAIETAINLGMESHVTVHTPLMWLK 176
            A  LG   +  G            R      +          L  E    V  P+  L+
Sbjct: 116 HALSLGADYLATGHYARVDRSGDTVRMLRGLDENKDQTYFLNQLNQEQLSKVMFPIGDLQ 175

Query: 177 KYETWKLAQD 186
           K    ++A++
Sbjct: 176 KSRVREIAKE 185


>gi|291518594|emb|CBK73815.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain or B
           subunit/GMP synthase (glutamine-hydrolyzing), N-terminal
           domain or A subunit [Butyrivibrio fibrisolvens 16/4]
          Length = 515

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 48/185 (25%), Gaps = 16/185 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +        ++  +  D+G            +RK   + +    
Sbjct: 218 KVLLALSGGVDSSVLAALLAKAIGKQLTCVFVDHG-----------LLRKNEGDEVESVF 266

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G   I  + +     + +    V    +           R              L  
Sbjct: 267 GEAGSFDINFVRVNAAERYYAKLAGVTEP-EQKRKIIGEEFIRVFEEEAKKIGTVDFLAQ 325

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I   V E   SG                         +  PL  L K E  K+  ++G
Sbjct: 326 GTIYPDVVE---SGLGGESVVIKSHHNVGGLPDYVDFKEIIEPLRNLFKDEVRKVGLELG 382

Query: 189 GQDLV 193
             + +
Sbjct: 383 LPEYL 387


>gi|326204361|ref|ZP_08194219.1| GMP synthase, large subunit [Clostridium papyrosolvens DSM 2782]
 gi|325985393|gb|EGD46231.1| GMP synthase, large subunit [Clostridium papyrosolvens DSM 2782]
          Length = 511

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 55/188 (29%), Gaps = 23/188 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS            ++  +  D+G   K E +    + +K  ++    
Sbjct: 216 KKVLCALSGGVDSSVAAVLIHKAVGKQLTCIFVDHGLLRKHEGDQVEQIFRKQYDIN--L 273

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                ED  L          S       +  ++              F+      A ++G
Sbjct: 274 VRVNCEDRFLD----RLKDVSDPETKRKIIGEE--------------FIRVFEDEAKKIG 315

Query: 128 -ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLAQ 185
            +  +V G    D           I++      L        +  PL  L K E  K  +
Sbjct: 316 KVDFLVQGTIYPDVIESGLGDAAVIKSHHNVGGLPDHVDFKEIIEPLRNLFKDEVRKAGE 375

Query: 186 DIGGQDLV 193
           ++   + +
Sbjct: 376 ELDIPEDL 383


>gi|254284393|ref|ZP_04959361.1| argininosuccinate synthase [gamma proteobacterium NOR51-B]
 gi|219680596|gb|EED36945.1| argininosuccinate synthase [gamma proteobacterium NOR51-B]
          Length = 406

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 48/157 (30%), Gaps = 7/157 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  + W  D     V T + D GQ  +VE        + +  +
Sbjct: 1   MSSINKVVLAYSGGLDTSVIVRWLQDTYGCEVVTFTADIGQGEEVEP--AREKARALG-V 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + D L E+ +            + T      +   ++    +  R I         A
Sbjct: 58  KEIYIDDLREEFVRDYVY---PMFRANTVYEGEYLLGTSIARPLIARRLIEIANETGADA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         +   Y       + A     +L
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGVQVIAPWREWDL 151


>gi|254454165|ref|ZP_05067602.1| argininosuccinate synthase [Octadecabacter antarcticus 238]
 gi|198268571|gb|EDY92841.1| argininosuccinate synthase [Octadecabacter antarcticus 238]
          Length = 410

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 46/162 (28%), Gaps = 6/162 (3%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           M+ +       +L +SGG D+S  L W   +    V T + D GQ  ++E        + 
Sbjct: 1   MSKVT-APKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEP--ARVKAEL 57

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +             +  +           +      + +   ++    +  R +      
Sbjct: 58  MGIPPENIYIEDVREEFV--RDFVFPMFRANAVYEGLYLLGTSIARPLISKRLVEIAAEV 115

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
              A   G T         + + Y       + A     +L 
Sbjct: 116 GADAVAHGATGKGNDQVRFELAAYALNPDIKVIAPWREWDLS 157


>gi|197124542|ref|YP_002136493.1| thiamine biosynthesis protein [Anaeromyxobacter sp. K]
 gi|220919267|ref|YP_002494571.1| thiamine biosynthesis protein [Anaeromyxobacter dehalogenans
          2CP-1]
 gi|196174391|gb|ACG75364.1| thiamine biosynthesis protein [Anaeromyxobacter sp. K]
 gi|219957121|gb|ACL67505.1| thiamine biosynthesis protein [Anaeromyxobacter dehalogenans
          2CP-1]
          Length = 351

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          + K   A+ L SGG DS+  L+    +   V+ ++F  G
Sbjct: 1  MGKQGKAIGLISGGLDSTLALALVRGQGIEVKAVNFYTG 39


>gi|153010381|ref|YP_001371595.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Ochrobactrum anthropi ATCC 49188]
 gi|151562269|gb|ABS15766.1| GMP synthase, large subunit [Ochrobactrum anthropi ATCC 49188]
          Length = 523

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 58/185 (31%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DSS     A +   D++  +  D+G   K E         ++VE+   
Sbjct: 225 SGKVICALSGGVDSSVAALLAHEAIGDQLTCILVDHGLMRKNE-------ANQVVEMFR- 276

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 E + LPL ++                +        +              A  L
Sbjct: 277 ------EHYNLPLILVDAADRFIGELEGETDPEKKRKTIGRLFIEVFEEEAKKLGGADFL 330

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+    +      TI++      L     + +  PL  L K E   L ++
Sbjct: 331 VQGTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMKMQLVEPLRELFKDEVRLLGKE 388

Query: 187 IGGQD 191
           +G  D
Sbjct: 389 LGLPD 393


>gi|260102261|ref|ZP_05752498.1| GMP synthase [Lactobacillus helveticus DSM 20075]
 gi|111610209|gb|ABH11596.1| GMP synthase/glutamine amidotransferase [Lactobacillus helveticus
           CNRZ32]
 gi|260083934|gb|EEW68054.1| GMP synthase [Lactobacillus helveticus DSM 20075]
          Length = 525

 Score = 48.0 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 61/204 (29%), Gaps = 30/204 (14%)

Query: 1   MNDIIKKA----------PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVE 49
           MND I                +L  SGG DSS   +       D++  +  D+G   K E
Sbjct: 213 MNDFIDMKVDDIRKEVGDKKVILGLSGGVDSSVTATLLHKAIGDQLTAIFVDHGMLRKDE 272

Query: 50  LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
            +    V + + + +      +       L  L  ++     + +  K            
Sbjct: 273 GD---QVMQALNKDLGVNIIRVNAQKRF-LDKLKGVTDPEQKRKIIGKEFIEVFNEEAKK 328

Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
            +++ FL         +                       TI++      L  + H  + 
Sbjct: 329 LKDVKFLAQGTLYTDVIE---------------SGTNTAQTIKSHHNVGGLPKDMHFKLI 373

Query: 170 TPLMWLKKYETWKLAQDIGGQDLV 193
            PL  L K E  +L + +G    +
Sbjct: 374 EPLRKLFKDEVRELGERLGIPHDL 397


>gi|325273429|ref|ZP_08139681.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas sp. TJI-51]
 gi|324101442|gb|EGB99036.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas sp. TJI-51]
          Length = 374

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 48/186 (25%), Gaps = 10/186 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS      +++  +VE L     + +     C    R+ + +     
Sbjct: 11  KTRVIVGMSGGVDSSVSALLLIEQGYQVEGLFMKNWEEDDGTEYC--TAREDLADAQAVC 68

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                + H        +   +     +             +  R  I        A  LG
Sbjct: 69  DRIGIKLHT--ANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFKAFLDYALSLG 125

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G                              +G +       P+  L+K E   
Sbjct: 126 ADLIATGHYVRRRDTGAVTELLKGLDPNKDQSYFLHAVGGKEIARTLFPVGELEKPEVRA 185

Query: 183 LAQDIG 188
           +A+  G
Sbjct: 186 IAEKHG 191


>gi|315655759|ref|ZP_07908657.1| exopolyphosphatase [Mobiluncus curtisii ATCC 51333]
 gi|315489823|gb|EFU79450.1| exopolyphosphatase [Mobiluncus curtisii ATCC 51333]
          Length = 528

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 58/185 (31%), Gaps = 13/185 (7%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKWK 68
            +   SGG DSS   +       D++  +  D+G  R     +        +   +    
Sbjct: 226 VICGLSGGVDSSVAAALVHKAIGDQLTCIFVDHGLLRAGEREQVERDYAANMGIRVKSVD 285

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +S           LG ++  S  +     I    + +     R ++  + A+    +   
Sbjct: 286 ESA--------RFLGALAGVSEPEQKRKIIGREFIRSFEAAQREVVAEIGASGGEVK--- 334

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +    +  PL  L K E   L +++G
Sbjct: 335 FLVQGTLYPDVVESGGGSGTANIKSHHNVGGLPEDLKFELIEPLRKLFKDEVRALGRELG 394

Query: 189 GQDLV 193
             D++
Sbjct: 395 LPDVI 399


>gi|304390896|ref|ZP_07372848.1| exopolyphosphatase [Mobiluncus curtisii subsp. curtisii ATCC 35241]
 gi|304325779|gb|EFL93025.1| exopolyphosphatase [Mobiluncus curtisii subsp. curtisii ATCC 35241]
          Length = 528

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 58/185 (31%), Gaps = 13/185 (7%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKWK 68
            +   SGG DSS   +       D++  +  D+G  R     +        +   +    
Sbjct: 226 VICGLSGGVDSSVAAALVHKAIGDQLTCIFVDHGLLRAGEREQVERDYAANMGIRVKSVD 285

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +S           LG ++  S  +     I    + +     R ++  + A+    +   
Sbjct: 286 ESA--------RFLGALAGVSEPEQKRKIIGREFIRSFEAAQREVVAEIGASGGEVK--- 334

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +    +  PL  L K E   L +++G
Sbjct: 335 FLVQGTLYPDVVESGGGSGTANIKSHHNVGGLPEDLKFELIEPLRKLFKDEVRALGRELG 394

Query: 189 GQDLV 193
             D++
Sbjct: 395 LPDVI 399


>gi|291616365|ref|YP_003519107.1| TilS [Pantoea ananatis LMG 20103]
 gi|291151395|gb|ADD75979.1| TilS [Pantoea ananatis LMG 20103]
          Length = 435

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 8/65 (12%)

Query: 1  MND---IIKKAPSALLLFSGGQDSSTCLSWAL-----DRFDRVETLSFDYGQRNKVELEC 52
          M+D   ++K+  + ++ FSGG DS+  L             R+  L   +G     +   
Sbjct: 1  MSDFDALLKENDALVVAFSGGLDSTVLLHQLRAWQQARPQSRLRALHVHHGLSPNADSWA 60

Query: 53 RLCVR 57
            C+ 
Sbjct: 61 AHCLC 65


>gi|229549592|ref|ZP_04438317.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis ATCC 29200]
 gi|255972288|ref|ZP_05422874.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis T1]
 gi|256956522|ref|ZP_05560693.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis DS5]
 gi|256963413|ref|ZP_05567584.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis HIP11704]
 gi|300860987|ref|ZP_07107074.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TUSoD Ef11]
 gi|307272736|ref|ZP_07553983.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX0855]
 gi|312951194|ref|ZP_07770097.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX0102]
 gi|229305257|gb|EEN71253.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis ATCC 29200]
 gi|255963306|gb|EET95782.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis T1]
 gi|256947018|gb|EEU63650.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis DS5]
 gi|256953909|gb|EEU70541.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis HIP11704]
 gi|300850026|gb|EFK77776.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TUSoD Ef11]
 gi|306510350|gb|EFM79373.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX0855]
 gi|310630859|gb|EFQ14142.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX0102]
 gi|315034636|gb|EFT46568.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX0027]
 gi|315143340|gb|EFT87356.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX2141]
 gi|315152679|gb|EFT96695.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX0031]
 gi|315159473|gb|EFU03490.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX0312]
 gi|315161320|gb|EFU05337.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis TX0645]
 gi|323481203|gb|ADX80642.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis 62]
          Length = 374

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 48/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MAD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAKVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRLGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A +LG   +  G      +         R       +T     L          PL  
Sbjct: 114 DYAMQLGADYVATGHYAQVETDENGVVHMLRGIDNNKDQTYFLSQLSQAQLAKTMFPLGG 173

Query: 175 LKKYETWKLAQDIG 188
           ++K E   +A   G
Sbjct: 174 MEKSEVRAIADRAG 187


>gi|254490475|ref|ZP_05103661.1| tRNA methyl transferase [Methylophaga thiooxidans DMS010]
 gi|224464219|gb|EEF80482.1| tRNA methyl transferase [Methylophaga thiooxydans DMS010]
          Length = 350

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 31/79 (39%), Gaps = 3/79 (3%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ---RNKVELECRLCVRKKIV 61
          + +   A+ L SGG DS   +    ++   VE ++F  G     +   +      ++K  
Sbjct: 1  MARQHKAVALISGGLDSMLAVRVLQEQGIEVEGINFYTGFCVEGHTHAIRNHDKDKQKRN 60

Query: 62 ELMPKWKDSLGEDHILPLA 80
            +   +    + HI+ + 
Sbjct: 61 NALWVAEQLDIKLHIVDVI 79


>gi|195568773|ref|XP_002102388.1| GD19536 [Drosophila simulans]
 gi|194198315|gb|EDX11891.1| GD19536 [Drosophila simulans]
          Length = 419

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 3/64 (4%)

Query: 7  KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               ++L +SGG D+S  L W LD+   V  +  D GQ+   +         KI     
Sbjct: 1  MPKETVILAYSGGLDTSCILKWLLDKQYEVICVLADVGQK--EDFTAAEKKALKIGAKKV 58

Query: 66 KWKD 69
             D
Sbjct: 59 IVAD 62


>gi|325111007|ref|YP_004272075.1| GMP synthase (glutamine-hydrolyzing) [Planctomyces brasiliensis DSM
           5305]
 gi|324971275|gb|ADY62053.1| GMP synthase (glutamine-hydrolyzing) [Planctomyces brasiliensis DSM
           5305]
          Length = 531

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 51/188 (27%), Gaps = 17/188 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS   +        ++  +  D G   K E      VR    E    
Sbjct: 233 KSRVICGLSGGVDSSVVAALLYRAIGPQLSCIFVDNGLLRKGE---SDSVRHHFQEHFR- 288

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H++            L+     + +   +   F+                  
Sbjct: 289 -----TDLHVVD---ASKQFLGELSGVSDPQKKRKIIGKIFIDVFREEAKSIDDARFLAQ 340

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G           +     D    TI++      L  E    +  PL  L K E  K+  +
Sbjct: 341 GTLY----PDVIESGANKDGPAATIKSHHNVGGLPEELGFELIEPLRDLFKDEVRKMGLE 396

Query: 187 IGGQDLVN 194
           +G  + + 
Sbjct: 397 LGLPEQLI 404


>gi|304439805|ref|ZP_07399702.1| GMP synthase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371711|gb|EFM25320.1| GMP synthase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 506

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/131 (12%), Positives = 33/131 (25%), Gaps = 1/131 (0%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +       +++  +  D+G   K E +      K       + 
Sbjct: 212 KKVLLALSGGVDSSVVAALLSKAVGEQLTCIFVDHGLMRKNEGDEVEAAFKDSGMHFIRV 271

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    L   +  +    ++ +      ++       V       +      +    
Sbjct: 272 DAEKRFLERLKGVVDPEEKRKAIGEEFIRVFEEEGKKIGSVDFLAQGTIYPDIIESGIGD 331

Query: 128 ITNIVIGVCET 138
              I       
Sbjct: 332 AAVIKSHHNVG 342


>gi|317154158|ref|YP_004122206.1| GMP synthase large subunit [Desulfovibrio aespoeensis Aspo-2]
 gi|316944409|gb|ADU63460.1| GMP synthase, large subunit [Desulfovibrio aespoeensis Aspo-2]
          Length = 514

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 51/186 (27%), Gaps = 18/186 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +L  SGG DS+             +  +  D G     E E              +  
Sbjct: 219 KVVLGLSGGIDSTVAAVLLHRAIGRNLHCIFVDNGLLRMGEKE--------------EVV 264

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             L E   L +     +  S    +  + + D       +    I      A     +  
Sbjct: 265 GFLAEHFDLNVKF---VDASREFLDKLVGVTDPEQKRKIIGYTFIDVFDREAKAIEGVRF 321

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   S         I++      L  + H+ +  PL  L K E  + A ++G
Sbjct: 322 LGQGTLYPDVIESESFKGPSAVIKSHHNVGGLPEKMHLKLVEPLRELFKDEVRRAAYELG 381

Query: 189 GQDLVN 194
             + + 
Sbjct: 382 LPEHII 387


>gi|256372424|ref|YP_003110248.1| argininosuccinate synthase [Acidimicrobium ferrooxidans DSM
          10331]
 gi|256009008|gb|ACU54575.1| argininosuccinate synthase [Acidimicrobium ferrooxidans DSM
          10331]
          Length = 398

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVR 57
           A   +L +SGG D+S  L W   +R   V  LS D GQ+  +E      + 
Sbjct: 1  MAEVVVLAYSGGLDTSVALKWLQVERGFDVVALSVDVGQQEDLEAVRTRALA 52


>gi|218130121|ref|ZP_03458925.1| hypothetical protein BACEGG_01708 [Bacteroides eggerthii DSM 20697]
 gi|217987625|gb|EEC53953.1| hypothetical protein BACEGG_01708 [Bacteroides eggerthii DSM 20697]
          Length = 377

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 54/196 (27%), Gaps = 1/196 (0%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L+  SGG DS+      +    R   +  D G  +++  +    +  K+     + K  
Sbjct: 69  CLIGVSGGVDSTYVAYLCVKYGLRPLAIHLDNGWNSELAEQNIKNLVDKLQIDFERIKVD 128

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
             E   L LA L          +  +     +        +  I     AT A       
Sbjct: 129 PVEFRDLQLAFLKASVVDLEAVSDNLIHVIFSRLAKKYKIKYFINGCNYATEAILPKSW- 187

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           I     +         +  + R + +               L ++K++            
Sbjct: 188 IAEFKYDGLNIRAIYKKFGSKRKLISYPTFSFWEAFKYMMRLSYMKQFAILNYVDYNKDN 247

Query: 191 DLVNLILEESHTCYLG 206
             + +  E   + Y G
Sbjct: 248 VKLFIQKELGWSDYGG 263


>gi|52549269|gb|AAU83118.1| argininosuccinate synthase [uncultured archaeon GZfos26F9]
          Length = 388

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/201 (10%), Positives = 50/201 (24%), Gaps = 8/201 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +L +SGG D+S C+    +   +D V  ++ D GQ  + +++       K+ +   +
Sbjct: 2   KKVVLAYSGGLDTSVCIPLLKEHYGYDEVIAVTVDVGQ-PEDDIKEAKERGAKLCDSYRE 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                         ++                +     +     R       A     + 
Sbjct: 61  IDAKEEFVRDYIFPLIKANGSYEGYVLGTAIARPLIAKHVVEVAREEKADAVAHGCTGKG 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL--- 183
                   V  T          +             E  + +     W      W     
Sbjct: 121 NDQLRFDAVFRTTDLDVVAPMRELSLTRVEERKYAAEHGILLKPEHRWSVDENIWSRSIE 180

Query: 184 AQDIGGQDLV--NLILEESHT 202
             ++     V    I + + +
Sbjct: 181 GAELEEPSFVPPEEIFQWTVS 201


>gi|16272139|ref|NP_438342.1| tRNA-specific 2-thiouridylase MnmA [Haemophilus influenzae Rd KW20]
 gi|260580945|ref|ZP_05848769.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus influenzae RdAW]
 gi|1074294|pir||D64144 probable ATPase HI0174 - Haemophilus influenzae (strain Rd KW20)
 gi|1573129|gb|AAC21843.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
 gi|260092434|gb|EEW76373.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus influenzae RdAW]
          Length = 418

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 35/135 (25%), Gaps = 4/135 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 +   SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 57  NATKKVICGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 113

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     +             +  + I F  F    A  
Sbjct: 114 AVCDKLG-IKLHKINFAAEYWDNVFEHFLTEYKAGRTPNPDILCNKEIKFKAFLEYAAED 172

Query: 126 LGITNIVIGVCETDY 140
           LG   I  G      
Sbjct: 173 LGADYIATGHYVRRA 187


>gi|303252772|ref|ZP_07338933.1| sulfate adenylyltransferase subunit 2 [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307248918|ref|ZP_07530928.1| Sulfate adenylyltransferase subunit 2 [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|302648422|gb|EFL78617.1| sulfate adenylyltransferase subunit 2 [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|306854529|gb|EFM86722.1| Sulfate adenylyltransferase subunit 2 [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
          Length = 308

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 49/182 (26%), Gaps = 18/182 (9%)

Query: 13  LLFSGGQDSSTCLSWALD----RFDRVE----TLSFDYGQRNKVELECRLCVRKKIVELM 64
           LLFSGG+DS+  L+ A          +      +  D G      ++ R    KK+    
Sbjct: 35  LLFSGGKDSAVLLALARKAFQLEGRELVLPFPLVHIDTGHNYPEVIQFRDEQVKKLNA-- 92

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L   H+      G +     T +         L      G + +          
Sbjct: 93  -----KLVVGHVEDSIAKGTVVLRKETDSRNAAQAVTLLETIEANGFDALMGGARRDEEK 147

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                 I     E         R +        ++ G    V    P+    + + W+  
Sbjct: 148 ARAKERIFSFRDEFGQWDPKAQRPELWSLYNAKLHKGENMRV---FPISNWTELDIWQYI 204

Query: 185 QD 186
           + 
Sbjct: 205 ER 206


>gi|300741998|ref|ZP_07072019.1| GMP synthase (Glutamine amidotransferase) [Rothia dentocariosa
           M567]
 gi|300381183|gb|EFJ77745.1| GMP synthase (Glutamine amidotransferase) [Rothia dentocariosa
           M567]
          Length = 530

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 51/187 (27%), Gaps = 11/187 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS   +       D++     D+G     E E          ++   
Sbjct: 225 EDRVICALSGGVDSSVAAALVHKAVGDQLTCFFIDHGLLRAGERE----------QVEQD 274

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  S+G   I        ++  +       K +           +    L+  A      
Sbjct: 275 YAASMGIRVITIDESERFLTALAGVSEPEQKRKIIGREFIRSFEQAERKLIEEAGEEGAQ 334

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +               I++      L  +    +  PL  L K E   + + 
Sbjct: 335 IKFLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPEDLAFELVEPLRTLFKDEVRAIGRQ 394

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 395 LGVPEKI 401


>gi|222084579|ref|YP_002543108.1| GMP synthase - glutamine amidotransferase protein [Agrobacterium
           radiobacter K84]
 gi|254799665|sp|B9J7L1|GUAA_AGRRK RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|221722027|gb|ACM25183.1| GMP synthase - glutamine amidotransferase protein [Agrobacterium
           radiobacter K84]
          Length = 520

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 54/184 (29%), Gaps = 17/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS       +   D++  +  D+G      L  +      +      +
Sbjct: 223 KRVICALSGGVDSSVAALLIHEAVGDQLTCILVDHG------LMRKDEAANVVAMFSEHY 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              L          +G++   S         +        +              A  LG
Sbjct: 277 NLHLL-HVDASERFIGELEGVSDP-------ETKRKIIGRLFIETFEEEAKKLGGADFLG 328

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   V E+    +      TI++      L    ++ +  PL  L K E   L +++
Sbjct: 329 QGTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMNMQLVEPLRELFKDEVRALGKEL 386

Query: 188 GGQD 191
           G  D
Sbjct: 387 GLPD 390


>gi|78042619|ref|YP_359927.1| hypothetical protein CHY_1081 [Carboxydothermus hydrogenoformans
          Z-2901]
 gi|77994734|gb|ABB13633.1| conserved hypothetical protein [Carboxydothermus hydrogenoformans
          Z-2901]
          Length = 338

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/31 (41%), Positives = 19/31 (61%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
           AL LFSGG DS+  +   L++   VE ++F
Sbjct: 3  KALALFSGGLDSTLAIKLILEQGVEVEAVNF 33


>gi|145639770|ref|ZP_01795372.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus influenzae PittII]
 gi|145271138|gb|EDK11053.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus influenzae PittII]
 gi|309750410|gb|ADO80394.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Haemophilus influenzae R2866]
          Length = 418

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 35/135 (25%), Gaps = 4/135 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 +   SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 57  NATKKVICGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 113

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     +             +  + I F  F    A  
Sbjct: 114 AVCDKLG-IKLHKINFAAEYWDNVFEHFLTEYKAGRTPNPDILCNKEIKFKAFLEYAAED 172

Query: 126 LGITNIVIGVCETDY 140
           LG   I  G      
Sbjct: 173 LGADYIATGHYVRRA 187


>gi|323703499|ref|ZP_08115145.1| argininosuccinate synthase [Desulfotomaculum nigrificans DSM 574]
 gi|323531490|gb|EGB21383.1| argininosuccinate synthase [Desulfotomaculum nigrificans DSM 574]
          Length = 401

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 2/81 (2%)

Query: 9  PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM-PK 66
          P  +L +SGG D+S  ++W  +     V  L+ D GQ  ++       ++    ++    
Sbjct: 2  PKVVLAYSGGLDTSIIIAWLKENYGYDVIALTADLGQGEELAPLEEKAIKSGASKIYIED 61

Query: 67 WKDSLGEDHILPLAILGDISH 87
           +    ED+I P    G I  
Sbjct: 62 LRKEFVEDYIFPTLKAGAIYE 82


>gi|294788306|ref|ZP_06753549.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Simonsiella muelleri ATCC 29453]
 gi|294483737|gb|EFG31421.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Simonsiella muelleri ATCC 29453]
          Length = 363

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 47/188 (25%), Gaps = 10/188 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + +  + ++  SGG DSS   +        V  +     + +  +  C +       + +
Sbjct: 1   MYENQNIIVGLSGGVDSSVTAALLKQDGANVHGVFMQNWEDDNNDQYCSIKQ-----DSL 55

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                +      + +          +      +      PN  V     I        A 
Sbjct: 56  DAMAVADIIGIDIDIVNFATQYKDKVFAYFLQEYAAGRTPNPDVLCNAEIKFKCFLDYAI 115

Query: 125 RLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
             G   I  G                   +          L          PL  L+K E
Sbjct: 116 EQGAEAIATGHYARKQIRNGVHYLLRGLDNNKDQSYFLYRLQPHQLEKSLFPLGHLQKTE 175

Query: 180 TWKLAQDI 187
             +LA ++
Sbjct: 176 VRRLATEL 183


>gi|297588098|ref|ZP_06946742.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Finegoldia magna ATCC 53516]
 gi|297574787|gb|EFH93507.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Finegoldia magna ATCC 53516]
          Length = 375

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/191 (12%), Positives = 53/191 (27%), Gaps = 10/191 (5%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           N +       ++  SGG DSS        +   V  +        + + +      +   
Sbjct: 8   NTMDNSKIKVVVGISGGVDSSVAALLLKQQGYDVVGIFMKNWD--ETDDDGVCTAEEDYK 65

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           + +    +   + + +         +  +      + +    PN  +     I       
Sbjct: 66  DAVTVANEIGIDYYSIN---FEKEYYDRVFTYFLDEYKKGRTPNPDIMCNKEIKFKAFLD 122

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLK 176
            A +LG   +  G       G    +      +          L  +    V  P+  L+
Sbjct: 123 FAMKLGADYVATGHYARIERGDDGVKLLRGLDNNKDQTYFLSQLTQDQIKNVMFPVGELQ 182

Query: 177 KYETWKLAQDI 187
           K E  ++A+  
Sbjct: 183 KKEVREIAKKY 193


>gi|190889964|ref|YP_001976506.1| GMP synthase (glutamine-hydrolyzing) protein [Rhizobium etli CIAT
           652]
 gi|218515693|ref|ZP_03512533.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Rhizobium etli 8C-3]
 gi|226739709|sp|B3PYH7|GUAA_RHIE6 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|190695243|gb|ACE89328.1| GMP synthase (glutamine-hydrolyzing) protein [Rhizobium etli CIAT
           652]
          Length = 520

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 53/184 (28%), Gaps = 17/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS       +   D++  +  D+G      L  +      +      +
Sbjct: 223 KRVICALSGGVDSSVAALLIHEAVGDQLTCILVDHG------LMRKDEAANVVAMFREHY 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              L          +G++   S         +        +              A  LG
Sbjct: 277 NLHLL-HVDASDRFIGELEGVSDP-------ETKRKIIGRLFIETFEEEAKKLGGADFLG 328

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   V E+    +      TI++      L     + +  PL  L K E   L +++
Sbjct: 329 QGTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMKMQLVEPLRELFKDEVRALGREL 386

Query: 188 GGQD 191
           G  D
Sbjct: 387 GLPD 390


>gi|114571455|ref|YP_758135.1| argininosuccinate synthase [Maricaulis maris MCS10]
 gi|119361286|sp|Q0AKJ6|ASSY_MARMM RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|114341917|gb|ABI67197.1| argininosuccinate synthase [Maricaulis maris MCS10]
          Length = 410

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 6  KKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          K     +L +SGG D+S  L W  D +D  V T + D GQ  ++E   R      + E+ 
Sbjct: 5  KPVKKVVLAYSGGLDTSVILKWLQDAYDAEVVTFTADLGQGEELEPARRKAEAAGVSEIF 64

Query: 65 -PKWKDSLGEDHILPL 79
              ++    D + P+
Sbjct: 65 IEDLREEFVRDFVYPM 80


>gi|8039809|sp|P44551|MNMA_HAEIN RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 383

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 35/135 (25%), Gaps = 4/135 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 +   SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 22  NATKKVICGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 78

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     +             +  + I F  F    A  
Sbjct: 79  AVCDKLG-IKLHKINFAAEYWDNVFEHFLTEYKAGRTPNPDILCNKEIKFKAFLEYAAED 137

Query: 126 LGITNIVIGVCETDY 140
           LG   I  G      
Sbjct: 138 LGADYIATGHYVRRA 152


>gi|332288775|ref|YP_004419627.1| argininosuccinate synthase [Gallibacterium anatis UMN179]
 gi|330431671|gb|AEC16730.1| argininosuccinate synthase [Gallibacterium anatis UMN179]
          Length = 443

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 23/57 (40%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +      K+      +  D
Sbjct: 17 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRKAKEYGAENARLID 73


>gi|328675274|gb|AEB27949.1| Putative tRNA (5-methylaminomethyl-2-thiouridylate)
           -methyltransferase [Francisella cf. novicida 3523]
          Length = 358

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 50/186 (26%), Gaps = 11/186 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DSS        +   V  +     + +  +  C     + I +    
Sbjct: 1   MPQKVIVGISGGVDSSVSALLLKQQGYDVTGVFMKNWEEDDTDEFCS--AEQDIADAQAV 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     +           ++ ++   + +    PN  +     I      +  + L
Sbjct: 59  CDSIGIPFKKIN---FAAEYWDNVFEHFLTEYKAGRTPNPDILCNKEIKFKAFLSYVHLL 115

Query: 127 GITNIVIGVCETDYSGYPDCRH------DTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           G   I  G                    D          LG E       P+  ++K + 
Sbjct: 116 GGDYIATGHYAQTRQAADGSVQLVKGLDDNKDQTYFLYTLGQEQLRQTIFPIGNVEKSKV 175

Query: 181 WKLAQD 186
            ++A++
Sbjct: 176 REIAKE 181


>gi|328554370|gb|AEB24862.1| tRNA-specific 2-thiouridylase MnmA [Bacillus amyloliquefaciens
           TA208]
          Length = 371

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 50/190 (26%), Gaps = 12/190 (6%)

Query: 4   IIKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           + K+      ++  SGG DSS       ++   V  +             C     +   
Sbjct: 1   MEKRPEDTRVVVGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGFC--TATEDYE 58

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +++          + +            + +    + +    PN  V     I       
Sbjct: 59  DVIRVCNQIGIPYYAVN---FEKQYWEKVFQYFLDEYKAGRTPNPDVMCNKEIKFKAFLD 115

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRH-----DTIRAIETAINLGMESHVTVHTPLMWLK 176
            A  LG   +  G            R      +          L  E    V  P+  L+
Sbjct: 116 HALSLGADYLATGHYARVDRSGDTVRMLRGLDENKDQTYFLNQLNQEQLSKVMFPIGDLQ 175

Query: 177 KYETWKLAQD 186
           K    ++A++
Sbjct: 176 KSRVREIAKE 185


>gi|254442923|ref|ZP_05056399.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Verrucomicrobiae bacterium DG1235]
 gi|198257231|gb|EDY81539.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Verrucomicrobiae bacterium DG1235]
          Length = 360

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/159 (13%), Positives = 40/159 (25%), Gaps = 4/159 (2%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              L+  SGG DS+       ++   +E         N+ E+      ++ I +     +
Sbjct: 2   KKILVAMSGGVDSAVAALLLKEQGHAIEGAYMK-NWINEDEILGDCPWQQDIEDAAAVAE 60

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                  ++    L     S +   +    Q    PN  V     I        A   G 
Sbjct: 61  ALGIPFRVVN---LMQEYRSRIVDYLLAGYQSGITPNPDVMCNREIKFGVFLDYALENGF 117

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
             +  G            R     A          + + 
Sbjct: 118 DEVATGHYAQIRETEDQPRAIIEGADPNKDQTYFLAKMR 156


>gi|195111878|ref|XP_002000503.1| GI10264 [Drosophila mojavensis]
 gi|193917097|gb|EDW15964.1| GI10264 [Drosophila mojavensis]
          Length = 417

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +L +SGG D+S  L W L++   V  +  D GQ  +   E       KI        
Sbjct: 4  EKVILAYSGGLDTSCILKWLLEQRYEVICVLADVGQ--QENFEAARQKALKIGAKEVIVA 61

Query: 69 D 69
          D
Sbjct: 62 D 62


>gi|148244940|ref|YP_001219634.1| hypothetical protein COSY_0804 [Candidatus Vesicomyosocius okutanii
           HA]
 gi|146326767|dbj|BAF61910.1| conserved hypothetical protein [Candidatus Vesicomyosocius okutanii
           HA]
          Length = 348

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 51/183 (27%), Gaps = 6/183 (3%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  K   A+ L SGG DS       LD+   VE ++F  G    +E       ++K   L
Sbjct: 1   MTNKQIKAVSLISGGLDSLLSTKIILDQGIHVEGINFFTGF--CMEGHTNTIRKQKKNGL 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + E   + L I+  I                N+         ++       + 
Sbjct: 59  KRNNALWVAEKLGIKLHIIDVIEEYRDVLLNPKHGYGKNMNPCLDCKGFMVKKAKEWMVE 118

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           Y        I   E         R +T+  I+            +    + + K E    
Sbjct: 119 YEFD----FIITGEVVGQRPMSQRKETMPIIQLESGANDLLLRPLCAKHLPVTKAEIENW 174

Query: 184 AQD 186
              
Sbjct: 175 VDR 177


>gi|86750300|ref|YP_486796.1| GMP synthase [Rhodopseudomonas palustris HaA2]
 gi|123292405|sp|Q2IV75|GUAA_RHOP2 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|86573328|gb|ABD07885.1| GMP synthase (glutamine-hydrolyzing) [Rhodopseudomonas palustris
           HaA2]
          Length = 540

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 56/184 (30%), Gaps = 17/184 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+       +   D++  +  D+G   K E        K +V+L     
Sbjct: 244 KVICGLSGGVDSAVAAVLIHEAIGDQLTCVFVDHGMLRKDE-------AKTVVDLFRHHY 296

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +            LG +S            +        +              A  L  
Sbjct: 297 NIPLVHVDASETFLGALSGV-------TDPEQKRKIIGKLFIDVFDAEAKVVGGADYLAQ 349

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+    +      TI++      L    ++ +  PL  L K E   L +++G
Sbjct: 350 GTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRALGRELG 407

Query: 189 GQDL 192
             ++
Sbjct: 408 LPEI 411


>gi|325299477|ref|YP_004259394.1| tRNA-specific 2-thiouridylase mnmA [Bacteroides salanitronis DSM
           18170]
 gi|324319030|gb|ADY36921.1| tRNA-specific 2-thiouridylase mnmA [Bacteroides salanitronis DSM
           18170]
          Length = 356

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 50/191 (26%), Gaps = 17/191 (8%)

Query: 4   IIKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + K+    +LL  SGG DSS       D    V  ++F +    + E +        + +
Sbjct: 1   MEKEKDKRVLLGMSGGTDSSVAAILLQDAGYEVTGVTFRF---YEKEGDTA-----YLDD 52

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                        +  +  +      +   +  +K +                L      
Sbjct: 53  ARELCSRLHIPHIVYDVREVFRKHIITYFIDEYLKGRTPVPCTLCNNRLKWPLLKRL--- 109

Query: 123 AYRLGITNIVIGVC-ETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM----WLKK 177
           A    I  I  G   +  + G            +            +   ++     L K
Sbjct: 110 ADEREIPFIASGHYVQKRFIGERWHIVQGADPDKDQSFFLWGLPQDIIARMVLPLGNLTK 169

Query: 178 YETWKLAQDIG 188
               ++A + G
Sbjct: 170 TRVREIASERG 180


>gi|319898139|ref|YP_004136336.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus influenzae F3031]
 gi|317433645|emb|CBY82030.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus influenzae F3031]
          Length = 383

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 35/135 (25%), Gaps = 4/135 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 +   SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 22  NATKKVICGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 78

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     +             +  + I F  F    A  
Sbjct: 79  AVCDKLG-IKLHKINFAAEYWDNVFEHFLTEYKAGRTPNPDILCNKEIKFKAFLEYAAED 137

Query: 126 LGITNIVIGVCETDY 140
           LG   I  G      
Sbjct: 138 LGADYIATGHYVRRT 152


>gi|260582389|ref|ZP_05850181.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus influenzae NT127]
 gi|260094540|gb|EEW78436.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus influenzae NT127]
          Length = 418

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 35/135 (25%), Gaps = 4/135 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 +   SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 57  NATKKVICGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 113

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     +             +  + I F  F    A  
Sbjct: 114 AVCDKLG-IKLHKINFAAEYWDNVFEHFLTEYKAGRTPNPDILCNKEIKFKAFLEYAAED 172

Query: 126 LGITNIVIGVCETDY 140
           LG   I  G      
Sbjct: 173 LGADYIATGHYVRRA 187


>gi|253579959|ref|ZP_04857227.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848958|gb|EES76920.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 408

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 59/215 (27%), Gaps = 29/215 (13%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
                +L +SGG D +T L   L       V     + GQ N+++         K+    
Sbjct: 1   MKEKVVLAYSGGLD-TTALIPWLKETFDYDVVCCCVNCGQGNELDGLDERA---KLSGAS 56

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             + + + ++               +    A  + ++         R  I        A 
Sbjct: 57  KLYIEDIVDEFCDDFI---------VPCVQAGAVYEHKYLLGTSMARPAIAKKLVEI-AR 106

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           + G   I  G                 +         +   + +  P     K+      
Sbjct: 107 KEGAVAICHGATGKG----------NDQIRFELGIKALAPDIKIIAPWRMTDKWTMQSRE 156

Query: 185 QDI--GGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
            +I       ++L  + SH+ Y   R+  +    G
Sbjct: 157 DEIAFCKAHGIDLPFDASHS-YSRDRNLWHISHEG 190


>gi|226310118|ref|YP_002770012.1| GMP synthase [Brevibacillus brevis NBRC 100599]
 gi|226093066|dbj|BAH41508.1| GMP synthase [Brevibacillus brevis NBRC 100599]
          Length = 513

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 57/187 (30%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS   +       D++  +  D+G   + E      V +   E    
Sbjct: 218 NKQVLCALSGGVDSSVVAALIHKAIGDQLTCMFVDHGLLRQGE---AEGVMETFGEKFSM 274

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +       ++ L  +S     + +                 N    VF    A   
Sbjct: 275 KVIKIDARERF-MSKLKGVSDPEQKRKI---------------IGNEFIYVFDEEAAKLT 318

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +  +  G   TD          TI++      L  +   T+  PL  L K E  KL  +
Sbjct: 319 DMDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMKFTLIEPLKALFKDEVRKLGTE 378

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 379 LGLPDEI 385


>gi|254440061|ref|ZP_05053555.1| argininosuccinate synthase [Octadecabacter antarcticus 307]
 gi|198255507|gb|EDY79821.1| argininosuccinate synthase [Octadecabacter antarcticus 307]
          Length = 410

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLC 55
          M+ +       +L +SGG D+S  L W   +    V T + D GQ  ++E      
Sbjct: 1  MSKVT-APKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEPARAKA 55


>gi|68248779|ref|YP_247891.1| tRNA-specific 2-thiouridylase MnmA [Haemophilus influenzae
           86-028NP]
 gi|68056978|gb|AAX87231.1| probable tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus influenzae 86-028NP]
          Length = 397

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 35/135 (25%), Gaps = 4/135 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 +   SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 36  NATKKVICGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 92

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     +             +  + I F  F    A  
Sbjct: 93  AVCDKLG-IKLHKINFAAEYWDNVFEHFLTEYKAGRTPNPDILCNKEIKFKAFLEYAAED 151

Query: 126 LGITNIVIGVCETDY 140
           LG   I  G      
Sbjct: 152 LGADYIATGHYVRRA 166


>gi|85715675|ref|ZP_01046655.1| GMP synthase [Nitrobacter sp. Nb-311A]
 gi|85697614|gb|EAQ35491.1| GMP synthase [Nitrobacter sp. Nb-311A]
          Length = 549

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 56/186 (30%), Gaps = 17/186 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS       +   D++  +  D+G   K E +        +V+L   
Sbjct: 251 KGRVICGLSGGVDSSVAAILIHEAIGDQLTCVFVDHGMLRKDEGKT-------VVDLFRH 303

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   + +PL  +                +        +              A  L
Sbjct: 304 -------HYNIPLVHVDASKQFLDELAGVTDPESKRKTIGRLFIDVFEAEAKTIGGAEFL 356

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+    +      TI++      L    ++ +  PL  L K E   L ++
Sbjct: 357 AQGTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPDRMNMKLVEPLRELFKDEVRALGRE 414

Query: 187 IGGQDL 192
           +G  D+
Sbjct: 415 LGLPDI 420


>gi|327191998|gb|EGE58979.1| GMP synthase (glutamine-hydrolyzing) protein [Rhizobium etli
           CNPAF512]
          Length = 520

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 53/184 (28%), Gaps = 17/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS       +   D++  +  D+G      L  +      +      +
Sbjct: 223 KRVICALSGGVDSSVAALLIHEAVGDQLTCILVDHG------LMRKDEAANVVAMFREHY 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              L          +G++   S         +        +              A  LG
Sbjct: 277 NLHLL-HVDASDRFIGELEGVSDP-------ETKRKIIGRLFIETFEEEAKRLGGADFLG 328

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   V E+    +      TI++      L     + +  PL  L K E   L +++
Sbjct: 329 QGTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMKMQLVEPLRELFKDEVRALGREL 386

Query: 188 GGQD 191
           G  D
Sbjct: 387 GLPD 390


>gi|297569866|ref|YP_003691210.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Desulfurivibrio alkaliphilus AHT2]
 gi|296925781|gb|ADH86591.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Desulfurivibrio alkaliphilus AHT2]
          Length = 358

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 45/187 (24%), Gaps = 18/187 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
                +  SGG DSS   +  L     VE +     Q           +      +    
Sbjct: 10  QKRVAVAMSGGVDSSVTAALMLQAGAEVEGVFMRLAQ---------PGIEDHQRRVEGVA 60

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                   +L    L +     + +           PN  V     I            G
Sbjct: 61  AHLGIPLTVLD---LAEPFGQKVLQPFVAAYLAGLTPNPCVFCNRQIKFGLLLEAMLSRG 117

Query: 128 ITNIVIGVCETDYSGYPDCRHDTI------RAIETAINLGMESHVTVHTPLMWLKKYETW 181
           +  +  G         P  R                  L  E    +  PL   +K E +
Sbjct: 118 VDFLATGHYVRLTPALPLDRLLCRGLDPRKDQSYFLCRLKREVLPRILFPLGEKRKTEVY 177

Query: 182 KLAQDIG 188
           +LA  +G
Sbjct: 178 ELAASLG 184


>gi|149065692|gb|EDM15565.1| tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
           (predicted), isoform CRA_b [Rattus norvegicus]
          Length = 166

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/113 (11%), Positives = 28/113 (24%), Gaps = 9/113 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--------QRNKVELECRLCV 56
           +      +   SGG DS+        R  +V  +                  + E    V
Sbjct: 1   MSALRHVVCALSGGVDSAVAALLLRRRGYQVTGVFMKNWDSLDEQGICAADKDCEDAYKV 60

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
            + +     +    + E      +   +      T N  +    +   + F  
Sbjct: 61  CQILDIPFHQVS-YVKEYWNDVFSDFLNEYEKGRTPNPDISCNKHIKFSCFHH 112


>gi|145637334|ref|ZP_01792994.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus influenzae PittHH]
 gi|145269426|gb|EDK09369.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus influenzae PittHH]
          Length = 383

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 35/135 (25%), Gaps = 4/135 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 +   SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 22  NATKKVICGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 78

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     +             +  + I F  F    A  
Sbjct: 79  AVCDKLG-IKLHKINFAAEYWDNVFEHFLTEYKAGRTPNPDILCNKEIKFKAFLEYAAED 137

Query: 126 LGITNIVIGVCETDY 140
           LG   I  G      
Sbjct: 138 LGADYIATGHYVRRA 152


>gi|78185088|ref|YP_377523.1| tRNA-specific 2-thiouridylase MnmA [Synechococcus sp. CC9902]
 gi|123580788|sp|Q3AV73|MNMA_SYNS9 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|78169382|gb|ABB26479.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Synechococcus sp. CC9902]
          Length = 389

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 51/186 (27%), Gaps = 15/186 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +  SGG DSS   +  ++    VE L+        +      C  + +V+     + 
Sbjct: 26  RVAVGLSGGVDSSLTAALLVEAGWEVEGLTL------WLMSGKGACCAEGLVDAAGICEQ 79

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                H++            + + V                R++ F       A    + 
Sbjct: 80  LGIPHHVVDTRETFQKEI--VQRLVDGYQDGITPLPCSQCNRSVKFGPMLEWAAQERNLP 137

Query: 130 NIVIGVCETDYSGYPDCRHD-------TIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
            I  G       G    RH                 +L  E+   +  PL  L K +T  
Sbjct: 138 RIATGHYARIRHGGDCGRHQLLRGLDSRKDQSYFLYDLPQEALGRIVFPLGELTKADTRI 197

Query: 183 LAQDIG 188
            A   G
Sbjct: 198 EAGRHG 203


>gi|332759354|gb|EGJ89662.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shigella flexneri 2747-71]
          Length = 357

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 50/179 (27%), Gaps = 9/179 (5%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS        +  +VE L     + +  E  C       + +          E 
Sbjct: 1   MSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADAQAVCDKLGIEL 58

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
           H +      +   +     +A            +  + I F  F    A  LG   I  G
Sbjct: 59  HTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATG 116

Query: 135 VCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                       R                 L  E       P+  L+K +  K+A+D+G
Sbjct: 117 HYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 175


>gi|329123820|ref|ZP_08252378.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus aegyptius ATCC 11116]
 gi|327469307|gb|EGF14778.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus aegyptius ATCC 11116]
          Length = 418

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 35/135 (25%), Gaps = 4/135 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 +   SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 57  NATKKVICGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 113

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     +             +  + I F  F    A  
Sbjct: 114 AVCDKLG-IKLHKINFAAEYWDNVFEHFLTEYKAGRTPNPDILCNKEIKFKAFLEYAAED 172

Query: 126 LGITNIVIGVCETDY 140
           LG   I  G      
Sbjct: 173 LGADYIATGHYVRRA 187


>gi|323172490|gb|EFZ58127.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli LT-68]
 gi|323947563|gb|EGB43567.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli H120]
          Length = 357

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 50/179 (27%), Gaps = 9/179 (5%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS        +  +VE L     + +  E  C       + +          E 
Sbjct: 1   MSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADAQAVCDKLGIEL 58

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
           H +      +   +     +A            +  + I F  F    A  LG   I  G
Sbjct: 59  HTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATG 116

Query: 135 VCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                       R                 L  E       P+  L+K +  K+A+D+G
Sbjct: 117 HYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 175


>gi|331662546|ref|ZP_08363469.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli TA143]
 gi|331060968|gb|EGI32932.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Escherichia coli TA143]
          Length = 357

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 50/179 (27%), Gaps = 9/179 (5%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS        +  +VE L     + +  E  C       + +          E 
Sbjct: 1   MSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADAQAVCDKLGIEL 58

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
           H +      +   +     +A            +  + I F  F    A  LG   I  G
Sbjct: 59  HTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATG 116

Query: 135 VCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                       R                 L  E       P+  L+K +  K+A+D+G
Sbjct: 117 HYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 175


>gi|297185882|gb|ADI24231.1| argininosuccinate synthase [Glomus intraradices]
          Length = 412

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 3/72 (4%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            LL +SGG D+S  L W +++   V     + GQ  + + E       KI      + +
Sbjct: 5  RVLLAYSGGLDTSCILVWLIEQGYEVIAYMANIGQ--EEDFEAAREKALKIGA-KKVYIE 61

Query: 70 SLGEDHILPLAI 81
           L + ++  L  
Sbjct: 62 DLRQIYVDELIF 73


>gi|288932827|ref|YP_003436887.1| asparagine synthase [Ferroglobus placidus DSM 10642]
 gi|288895075|gb|ADC66612.1| asparagine synthase [Ferroglobus placidus DSM 10642]
          Length = 265

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 54/188 (28%), Gaps = 34/188 (18%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           +   I    S ++ FSGG DSST    A +    V  ++         E+     + +++
Sbjct: 9   LEKFISNFESVVVAFSGGVDSSTLAGLA-NELTEVLAVTIISPTTPSREIRDAERIAREL 67

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                       +     L  L D +    T++                    + L    
Sbjct: 68  N----------LKHRFHELNELEDENFVRNTED-------------RCYFCKRMVLTSLK 104

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            +A + G   +  G   ++  G+       +              V     +    K E 
Sbjct: 105 KIAEKEGYEAVFEGTNASELQGHRPGYRAVVE----------LEDVYSPWAIFGFTKEEI 154

Query: 181 WKLAQDIG 188
            ++A+  G
Sbjct: 155 REIAKMKG 162


>gi|322417767|ref|YP_004196990.1| Thiamine biosynthesis protein-like protein [Geobacter sp. M18]
 gi|320124154|gb|ADW11714.1| Thiamine biosynthesis protein-like protein [Geobacter sp. M18]
          Length = 334

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
              A+ L SGG DS+  +   L++   VE L+F
Sbjct: 1  MQRKAIALLSGGLDSTLAVKVLLEQGIAVEALNF 34


>gi|213850128|ref|ZP_03381026.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Salmonella enterica subsp. enterica serovar Typhi str.
          M223]
          Length = 116

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 23/73 (31%), Gaps = 8/73 (10%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--------RLC 55
          + +     ++  SGG DSS        +  +VE L     + +  E  C           
Sbjct: 1  MSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60

Query: 56 VRKKIVELMPKWK 68
          V  K+   +    
Sbjct: 61 VCDKLGIELHTVN 73


>gi|323341801|ref|ZP_08082034.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464226|gb|EFY09419.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 372

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 51/189 (26%), Gaps = 16/189 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD----------YGQRNKVELECRLCVRKK 59
             L+  SGG DS+        +   V                 G     +  C   V   
Sbjct: 2   KVLVGLSGGVDSAVAAHILKSQGHDVTCAFMRNWDSFANNDILGNPTIKDDMCSQEVDY- 60

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
             +   +  D LG + +L +  + +      +  +A   + N      +  R  +     
Sbjct: 61  --DDAKRVADHLGLE-LLRVDYVKEYWDHVFSFFLAETERGNTPNPDILCNR-FVKFDAF 116

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW-LKKY 178
                  G   +  G       G      D  +     ++      +      +  L K 
Sbjct: 117 YDFMDANGFEALATGHYAITRDGKMYRAVDQNKDQTYFLSRVRPEVLPRVLFPLGSLTKD 176

Query: 179 ETWKLAQDI 187
           E  ++A ++
Sbjct: 177 EVRRIALEL 185


>gi|95928619|ref|ZP_01311366.1| Argininosuccinate synthase [Desulfuromonas acetoxidans DSM 684]
 gi|95135409|gb|EAT17061.1| Argininosuccinate synthase [Desulfuromonas acetoxidans DSM 684]
          Length = 405

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 54/179 (30%), Gaps = 16/179 (8%)

Query: 5   IKKA---PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
           ++K      A+L +SGG D+S  L W ++     V   + D GQ    EL+      KK 
Sbjct: 1   MQKKGTIKKAVLAYSGGLDTSIILKWLVEEYGCEVIAFAADLGQ--GEELDFIPEKAKKT 58

Query: 61  VE---LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
                 +   ++    D + P+         +            ++    +  + +   +
Sbjct: 59  GASKCFIEDLREEFVRDFVFPM-------FRANAIYEGRYFLGTSIARPLIAKKQMEIAL 111

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
                A   G T         +   Y       + A     +L   S +  +     + 
Sbjct: 112 AEGADAVSHGATGKGNDQVRFELGYYHFDPSIHVIAPWREWDLNSRSALEAYAKKHGIP 170


>gi|325104659|ref|YP_004274313.1| GMP synthase, large subunit [Pedobacter saltans DSM 12145]
 gi|324973507|gb|ADY52491.1| GMP synthase, large subunit [Pedobacter saltans DSM 12145]
          Length = 510

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 53/187 (28%), Gaps = 18/187 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS           + +  +  D G   K E E  L   K +      
Sbjct: 213 NDKVVLALSGGVDSSVAALLLHKAIGNNLYCVFVDNGLLRKNEFESVLESYKTLG----- 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 +      A L  ++     +        +         +++ +L         +
Sbjct: 268 LNVKGVDAKDQFYAALKGLTDPEKKRKAIGGKFIDIFDAEAHLIQDVKWLAQGTIYPDVI 327

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
              ++  G   T             ++      L     + V  PL  L K E  ++ + 
Sbjct: 328 ESVSVNGGPSATI------------KSHHNVGGLPDFMKLKVVEPLRSLFKDEVRRVGRA 375

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 376 LGLPENI 382


>gi|296111878|ref|YP_003622260.1| argininosuccinate synthase [Leuconostoc kimchii IMSNU 11154]
 gi|295833410|gb|ADG41291.1| argininosuccinate synthase [Leuconostoc kimchii IMSNU 11154]
          Length = 408

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L +SGG D+S  + W  D+   +  +  + GQ +  ++E       ++      
Sbjct: 1  MTEKLVLAYSGGLDTSVAIPWLKDKGYDIIAVVLNVGQ-HGKDMEMIQAKALQVGASQSI 59

Query: 67 WKDSLGED 74
            D+  E 
Sbjct: 60 VIDAQAEF 67


>gi|289666030|ref|ZP_06487611.1| tRNA-specific 2-thiouridylase MnmA [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 378

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 46/188 (24%), Gaps = 11/188 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            P  ++  SGG DSS        + +++  L       +          R+  V +    
Sbjct: 3   TPRIVVGVSGGVDSSVAAWKLAQQGEQIAGLFMQNWADDGSGDCRAEDDRRDAVAVCGVL 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                               S + ++   +      PN  V     +        A  LG
Sbjct: 63  GIP------FHFRDFSGEYWSGVFEHFLAEYAAGRTPNPDVLCNREVKFKHFLDAAQALG 116

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G            R                 LG         P+  L+K    +
Sbjct: 117 AERIATGHYAQVAHRGGRWRLLRGADRGKDQSYFLHQLGQTQLAATLFPIGDLEKSTLRR 176

Query: 183 LAQDIGGQ 190
            AQD G  
Sbjct: 177 TAQDAGLP 184


>gi|261329284|emb|CBH12265.1| GMP synthase, putative [Trypanosoma brucei gambiense DAL972]
          Length = 658

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 2/62 (3%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKK 59
            +   +    L L SGG DS+ C    L     +RV  +  D+G     E +  +   + 
Sbjct: 216 RERTTQGQKVLCLASGGVDSTVCAVLLLKALGPERVVCIHIDHGFMRLNESQEVVAALRA 275

Query: 60  IV 61
             
Sbjct: 276 AG 277


>gi|257416449|ref|ZP_05593443.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis AR01/DG]
 gi|257158277|gb|EEU88237.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enterococcus faecalis ARO1/DG]
          Length = 374

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 48/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MAD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAKVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRLGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A +LG   +  G      +         R       +T     L          PL  
Sbjct: 114 DYAMQLGADYVATGHYAQVETDENGVVHMLRGIDNNKDQTYFLSQLSQAQLAKTMFPLGG 173

Query: 175 LKKYETWKLAQDIG 188
           + K E   +A+  G
Sbjct: 174 MGKSEVRAIAERAG 187


>gi|254785838|ref|YP_003073267.1| tRNA U34 sulfurtransferase [Teredinibacter turnerae T7901]
 gi|237686421|gb|ACR13685.1| tRNA U34 sulfurtransferase [Teredinibacter turnerae T7901]
          Length = 367

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 32/129 (24%), Gaps = 5/129 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS      L +  +VE L       +     C       +++     + 
Sbjct: 11  KVIVGMSGGVDSSVSALLLLQQGYQVEGLFMKNWNEDDGTEYC--TAMTDLLDAANVCQK 68

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                H            +     +             +  R  I        A +LG  
Sbjct: 69  LGIPLHT--ANFATQYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFKVFLDYAEQLGAN 125

Query: 130 NIVIGVCET 138
            I  G    
Sbjct: 126 YIATGHYAR 134


>gi|269929160|ref|YP_003321481.1| argininosuccinate synthase [Sphaerobacter thermophilus DSM 20745]
 gi|269788517|gb|ACZ40659.1| argininosuccinate synthase [Sphaerobacter thermophilus DSM 20745]
          Length = 409

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 1/50 (2%)

Query: 9  PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVR 57
             +L +SGG D+S  L+W  +     V   + D GQ +  E      + 
Sbjct: 7  NKVVLAYSGGLDTSVILAWIKEHYGCEVIAFTADVGQGDSFEGLEAKALA 56


>gi|298345340|ref|YP_003718027.1| GMP synthase (glutamine-hydrolyzing) [Mobiluncus curtisii ATCC
           43063]
 gi|298235401|gb|ADI66533.1| GMP synthase (glutamine-hydrolyzing) [Mobiluncus curtisii ATCC
           43063]
          Length = 528

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 58/185 (31%), Gaps = 13/185 (7%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKWK 68
            +   SGG DSS   +       D++  +  D+G  R     +        +   +    
Sbjct: 226 VICGLSGGVDSSVAAALVHKAIGDQLTCIFVDHGLLRAGEREQVERDYAANMGIRVKSVD 285

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +S           LG ++  S  +     I    + +     R ++  + A+    +   
Sbjct: 286 ESA--------RFLGALAGVSEPEQKRKIIGREFIRSFEAAQRELVAEIGASGGEVK--- 334

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +    +  PL  L K E   L +++G
Sbjct: 335 FLVQGTLYPDVVESGGGSGTANIKSHHNVGGLPEDLKFELIEPLRKLFKDEVRALGRELG 394

Query: 189 GQDLV 193
             D++
Sbjct: 395 LPDVI 399


>gi|167623309|ref|YP_001673603.1| GMP synthase [Shewanella halifaxensis HAW-EB4]
 gi|226739729|sp|B0TLJ4|GUAA_SHEHH RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|167353331|gb|ABZ75944.1| GMP synthase, large subunit [Shewanella halifaxensis HAW-EB4]
          Length = 525

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 55/181 (30%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS           D++  +  D G    + L     V +   +       
Sbjct: 230 VILGLSGGVDSSVVAMLLHRAIGDKLTCVFVDNG---LLRLNEAEQVMEMFGDHFGLNIV 286

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +  ++    A+ G+    +  K +     +                      A  L   
Sbjct: 287 HVDAENRFLDAMAGEAEPEAKRKIIGRVFVEIFDEE-----------SKKCVNAKWLAQG 335

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S         I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 336 TIYPDVIESAGSATGKAH--CIKSHHNVGGLPDDMEMGLVEPLRELFKDEVRKIGLELGL 393

Query: 190 Q 190
            
Sbjct: 394 P 394


>gi|145635278|ref|ZP_01790981.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus influenzae PittAA]
 gi|205822421|sp|Q4QP16|MNMA_HAEI8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|145267422|gb|EDK07423.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus influenzae PittAA]
          Length = 383

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 35/135 (25%), Gaps = 4/135 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 +   SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 22  NATKKVICGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 78

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     +             +  + I F  F    A  
Sbjct: 79  AVCDKLG-IKLHKINFAAEYWDNVFEHFLTEYKAGRTPNPDILCNKEIKFKAFLEYAAED 137

Query: 126 LGITNIVIGVCETDY 140
           LG   I  G      
Sbjct: 138 LGADYIATGHYVRRA 152


>gi|300310760|ref|YP_003774852.1| argininosuccinate synthase [Herbaspirillum seropedicae SmR1]
 gi|124483516|emb|CAM32631.1| Argininosuccinate synthase protein [Herbaspirillum seropedicae]
 gi|300073545|gb|ADJ62944.1| argininosuccinate synthase protein [Herbaspirillum seropedicae
          SmR1]
          Length = 444

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 29/72 (40%), Gaps = 3/72 (4%)

Query: 1  MNDIIKK---APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M++I++         + FSGG D+S  L+W   +       + + GQ ++ + +      
Sbjct: 1  MSNILQSVPVNQKVGIAFSGGLDTSAALTWMRQKGAIPYAYTANLGQPDEPDYDAIPKKA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 MQYGAQQARLID 72


>gi|72391078|ref|XP_845833.1| GMP synthase [Trypanosoma brucei TREU927]
 gi|62176460|gb|AAX70568.1| GMP synthase, putative [Trypanosoma brucei]
 gi|70802369|gb|AAZ12274.1| GMP synthase, putative [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
          Length = 658

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 2/62 (3%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKK 59
            +   +    L L SGG DS+ C    L     +RV  +  D+G     E +  +   + 
Sbjct: 216 RERTTQGQKVLCLASGGVDSTVCAVLLLKALGPERVVCIHIDHGFMRLNESQEVVAALRA 275

Query: 60  IV 61
             
Sbjct: 276 AG 277


>gi|323165641|gb|EFZ51428.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shigella sonnei 53G]
          Length = 357

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 50/179 (27%), Gaps = 9/179 (5%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS        +  +VE L     + +  E  C       + +          E 
Sbjct: 1   MSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADAQAVCDKLGIEL 58

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
           H +      +   +     +A            +  + I F  F    A  LG   I  G
Sbjct: 59  HTVN--FAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATG 116

Query: 135 VCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                       R                 L  E       P+  L+K +  K+A+D+G
Sbjct: 117 HYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 175


>gi|319775956|ref|YP_004138444.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus influenzae F3047]
 gi|317450547|emb|CBY86764.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus influenzae F3047]
          Length = 418

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 35/135 (25%), Gaps = 4/135 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 +   SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 57  NATKKVICGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 113

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     +             +  + I F  F    A  
Sbjct: 114 AVCDKLG-IKLHKINFAAEYWDNVFEHFLTEYKAGRTPNPDILCNKEIKFKAFLEYAAED 172

Query: 126 LGITNIVIGVCETDY 140
           LG   I  G      
Sbjct: 173 LGADYIATGHYVRRA 187


>gi|240278736|gb|EER42242.1| argininosuccinate synthetase [Ajellomyces capsulatus H143]
          Length = 412

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 24/65 (36%), Gaps = 2/65 (3%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          +       L +SGG D+S  L+W +++   V     D GQ    + +        I  L 
Sbjct: 1  MPAKQKVCLAYSGGLDTSCILAWLIEQGYDVVCFLADVGQ--AEDFKEAERKALSIGALK 58

Query: 65 PKWKD 69
              D
Sbjct: 59 LVVAD 63


>gi|227497304|ref|ZP_03927536.1| GMP synthase (glutamine-hydrolyzing) [Actinomyces urogenitalis DSM
           15434]
 gi|226833175|gb|EEH65558.1| GMP synthase (glutamine-hydrolyzing) [Actinomyces urogenitalis DSM
           15434]
          Length = 534

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 57/184 (30%), Gaps = 11/184 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DSS   +       D++  +  D+G     E   R  V +     M     
Sbjct: 232 VICGLSGGVDSSVAAALVHRAIGDQLTCIFVDHGLLRAGE---REQVEQDYAAGMGIRVI 288

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++ E      A+ G    +       +  ++          R I  +         L   
Sbjct: 289 TVDESERFLSALAG---VTDPETKRKIIGREFIRSFEAAQRRVIEMVGEQGGEIKFLVQG 345

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   V E+            I++      L  + +  +  PL  L K E   + +++G 
Sbjct: 346 TLYPDVVESGGGTGT----ANIKSHHNVGGLPDDLNFALIEPLRTLFKDEVRAIGRELGV 401

Query: 190 QDLV 193
            + +
Sbjct: 402 PEKI 405


>gi|261349498|ref|ZP_05974915.1| PP-loop family protein [Methanobrevibacter smithii DSM 2374]
 gi|288861862|gb|EFC94160.1| PP-loop family protein [Methanobrevibacter smithii DSM 2374]
          Length = 336

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 21/68 (30%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
          K     + FSGG DS+     A    D+   ++ D        ++      K+       
Sbjct: 15 KNRKIAIAFSGGADSTLLAYLASKVSDKPIAITIDNHIFPTGFIKHCKKTAKEFGIKHKV 74

Query: 67 WKDSLGED 74
             +  E 
Sbjct: 75 IDLNFYEH 82


>gi|152968782|ref|YP_001333891.1| tRNA(Ile)-lysidine synthetase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|150953631|gb|ABR75661.1| tRNA(Ile)-lysidine synthetase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
          Length = 437

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 35/116 (30%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           L+ FSGG DS+  L   +   ++   L+      +               ++  +W+  L
Sbjct: 20  LVAFSGGLDSTVLLHQLVQLREQDPALTLRAVHVHHGLSAHADQWVAHCRQVCQQWQVPL 79

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              H+        +   +         +  N     V  ++         LA + G
Sbjct: 80  VVHHVTLARGGLGVEAHARAARYQAFQETLNAGEVLVTAQHQDDQCETLLLALKRG 135


>gi|149738218|ref|XP_001499390.1| PREDICTED: similar to Argininosuccinate synthase
          (Citrulline--aspartate ligase) [Equus caballus]
          Length = 412

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 21/48 (43%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
          +    S +L +SGG D+S  L W  ++   V     + GQ+   E   
Sbjct: 1  MSGKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48


>gi|27806925|ref|NP_776317.1| argininosuccinate synthase [Bos taurus]
 gi|114285|sp|P14568|ASSY_BOVIN RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|162697|gb|AAA30388.1| argininosuccinate synthetase [Bos taurus]
 gi|74268328|gb|AAI02475.1| Argininosuccinate synthetase 1 [Bos taurus]
 gi|296482159|gb|DAA24274.1| argininosuccinate synthase [Bos taurus]
          Length = 412

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 21/48 (43%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
          +    S +L +SGG D+S  L W  ++   V     + GQ+   E   
Sbjct: 1  MSGKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 48


>gi|282879609|ref|ZP_06288340.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Prevotella timonensis CRIS 5C-B1]
 gi|281306557|gb|EFA98586.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Prevotella timonensis CRIS 5C-B1]
          Length = 514

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 51/188 (27%), Gaps = 21/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS C +         +  +  D+G   K E +  +   + +      
Sbjct: 213 NDRVILGLSGGVDSSVCATLLNKAIGKNLTCIFVDHGMLRKDEFKRVMKAYEGLG----- 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                          L  I   +  K         +              VF A      
Sbjct: 268 ---------------LNVIGVDASKKFFQDLKGVTDPEEKRKIIGRDFVEVFNAEAKKIT 312

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G    D           I++      L  E  + +  PL WL K E  ++ Q 
Sbjct: 313 DAKWLAQGTIYPDRIESLSITGMVIKSHHNVGGLPKEMKLKLCEPLQWLFKDEVRRVGQQ 372

Query: 187 IGGQDLVN 194
           +   + + 
Sbjct: 373 LEMPEHLI 380


>gi|260439327|ref|ZP_05793143.1| GMP synthase [Butyrivibrio crossotus DSM 2876]
 gi|292808337|gb|EFF67542.1| GMP synthase [Butyrivibrio crossotus DSM 2876]
          Length = 514

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 47/190 (24%), Gaps = 22/190 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS            ++  +  D+G   K E +    V          
Sbjct: 215 NGKVLLALSGGVDSSVAAGLLSRAIGKQLTCVFVDHGLLRKNEGDEVEQV---------- 264

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G +    L  +   +       +A   +               F+      A ++
Sbjct: 265 ----FGPNGQFDLNFIRVNAQERYYSKLAGVTEPERKRKII----GEEFIRVFEEEAKKI 316

Query: 127 GIT---NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           G            +   SG                         +  PL  L K E  K 
Sbjct: 317 GAVDFLAQGTIYPDVVESGLGGESAVIKSHHNVGGLPDYVDFKEIIEPLRNLFKDEVRKA 376

Query: 184 AQDIGGQDLV 193
             ++G  + +
Sbjct: 377 GLELGIPEKL 386


>gi|242279024|ref|YP_002991153.1| GMP synthase [Desulfovibrio salexigens DSM 2638]
 gi|259647677|sp|C6BSD8|GUAA_DESAD RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|242121918|gb|ACS79614.1| GMP synthase, large subunit [Desulfovibrio salexigens DSM 2638]
          Length = 515

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 58/196 (29%), Gaps = 21/196 (10%)

Query: 1   MNDIIKKAPSALLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
           M + I      ++L  SGG DS+            R+  +  D G     E E       
Sbjct: 212 MREKIGDNQ--VVLGLSGGIDSTVVAVLLHKAIGKRLHCIFVDNGLLRMHERE------- 262

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
                  +    L E   L +     +  + L  +    ++D       +    I     
Sbjct: 263 -------EVIGFLEEHFELNV---KCVDSAELFLDKLKGVEDPEKKRKLIGYTFIDVFNE 312

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            A+    +          +   S         I++      L  +  + +  PL  L K 
Sbjct: 313 EASALKDVKFLAQGTLYPDVIESESFKGPSAVIKSHHNVGGLPEDMDLDLVEPLRELFKD 372

Query: 179 ETWKLAQDIGGQDLVN 194
           E  K+A ++G  + + 
Sbjct: 373 EVRKVAYELGLPEFII 388


>gi|197122790|ref|YP_002134741.1| tRNA-specific 2-thiouridylase MnmA [Anaeromyxobacter sp. K]
 gi|196172639|gb|ACG73612.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Anaeromyxobacter sp. K]
          Length = 351

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/183 (13%), Positives = 43/183 (23%), Gaps = 7/183 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DSST  +        V  ++      +        C    + +     + 
Sbjct: 2   RILVAMSGGVDSSTAAALLAGHGHEVIGVTMRVADYSDAARGRSCCAPDDVEDARAAARR 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                ++  +          +         +   PN  V     +   +    A  LG  
Sbjct: 62  LGIPFYVANV---EARFRERVIDRFVDDYVEGRTPNPCVACNTEVKFDWLLARARALGAK 118

Query: 130 ----NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
               +                             LG ++   V  P+  L K      A 
Sbjct: 119 LATGHYARVEERGGRRALLTAADPAKDQSYFLYGLGQDALRDVLFPVGALAKPVVRAEAA 178

Query: 186 DIG 188
             G
Sbjct: 179 RAG 181


>gi|149372156|ref|ZP_01891426.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [unidentified eubacterium SCB49]
 gi|149354923|gb|EDM43485.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [unidentified eubacterium SCB49]
          Length = 509

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 51/186 (27%), Gaps = 19/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DS+             +  +  + G   K E    L   K +       
Sbjct: 214 DKVVLGLSGGVDSTVAAILLHKAIGKNLYCIFVNNGLLRKNEFTDVLHQYKDMG-----L 268

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                +     L  L  ++     +            +      ++++L         + 
Sbjct: 269 NVKGVDASKRFLDALAGLTDPEAKRKAIGNAFIEVFDDEATSIEDVVYLAQGTIYPDVIE 328

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                        S   +    TI++      L     + +  PL  L K E  ++  ++
Sbjct: 329 -------------SVSVNGPSVTIKSHHNVGGLPDFMKLKIVEPLRMLFKDEVRRVGAEM 375

Query: 188 GGQDLV 193
           G   L+
Sbjct: 376 GIDPLL 381


>gi|134302735|ref|YP_001122703.1| tRNA-specific 2-thiouridylase MnmA [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|166234854|sp|A4J081|MNMA_FRATW RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|134050512|gb|ABO47583.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Francisella tularensis subsp. tularensis WY96-3418]
          Length = 359

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/132 (12%), Positives = 37/132 (28%), Gaps = 5/132 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +    ++  SGG DSS        +   V  +     + +  +  C     + I +    
Sbjct: 2   ENKKVIVGISGGVDSSVSALLLKQQGYDVTGVFMKNWEEDDTDEFCS--AEQDIADAQAV 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     +           ++ ++  +K +    PN  +     I      +  + L
Sbjct: 60  CDSIGIPFKKIN---FAAEYWDNVFEHFLIKYKAGRTPNPDILCNKEIKFKAFLSYVHLL 116

Query: 127 GITNIVIGVCET 138
           G   I  G    
Sbjct: 117 GGDYIATGHYAQ 128


>gi|110005181|emb|CAK99508.1| probable trna 5-methylaminomethyl-2-thiouridylate-methyltransferase
           protein [Spiroplasma citri]
          Length = 377

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 43/190 (22%), Gaps = 13/190 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV---ELMP 65
              ++  SGG DSS  L         VE L                     ++   EL  
Sbjct: 2   KKVVVGLSGGVDSSVSLYLLQQAGYDVEGLFMRNWDSQLNNDILGNKAINNMICPQELDY 61

Query: 66  KWKDSLGEDHILPL---AILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN-------IIF 115
               ++ +   +PL     + +         ++   +        +  +           
Sbjct: 62  NDAVNVSKTLQVPLHRADFIKEYWEYVFKHFISEYQKGRTPNPDILCNKYIKFNYFLNYA 121

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
           +         +G    V    E                      L          PL  L
Sbjct: 122 INNYHADFIAMGHYARVRFNEELQEYQLLRGIDRDKDQTYFLSQLNQGQLSKTFFPLGNL 181

Query: 176 KKYETWKLAQ 185
            K E  ++A 
Sbjct: 182 TKKEVREIAM 191


>gi|187930950|ref|YP_001890934.1| tRNA-specific 2-thiouridylase MnmA [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|224457896|ref|ZP_03666369.1| tRNA-specific 2-thiouridylase MnmA [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254371318|ref|ZP_04987320.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|71658014|sp|Q5NEF9|MNMA_FRATT RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205816649|sp|B2SEJ7|MNMA_FRATM RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205822328|sp|Q14FW2|MNMA_FRAT1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|151569558|gb|EDN35212.1| hypothetical protein FTBG_01100 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|187711859|gb|ACD30156.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Francisella tularensis subsp. mediasiatica FSC147]
          Length = 359

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/132 (12%), Positives = 37/132 (28%), Gaps = 5/132 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +    ++  SGG DSS        +   V  +     + +  +  C     + I +    
Sbjct: 2   ENKKVIVGISGGVDSSVSALLLKQQGYDVTGVFMKNWEEDDTDEFCS--AEQDIADAQAV 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     +           ++ ++  ++ +    PN  +     I      +  + L
Sbjct: 60  CDSIGIPFKKIN---FAAEYWDNVFEHFLIEYKAGRTPNPDILCNKEIKFKAFLSYVHLL 116

Query: 127 GITNIVIGVCET 138
           G   I  G    
Sbjct: 117 GGDYIATGHYAQ 128


>gi|317182580|dbj|BAJ60364.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Helicobacter pylori F57]
          Length = 342

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 48/176 (27%), Gaps = 15/176 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS       ++   +  +         ++L          ++   K  +
Sbjct: 2   KIAVLLSGGVDSSYSAYSLKEQGHELVGIY--------LKLHASEKKHDLYIKNAQKACE 53

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG    L +        S++        ++   PN       ++    A   A +LG  
Sbjct: 54  FLGIP--LEVLDFQKDFKSAVYDAFISAYEEGQTPNPCALCNPLMKFGLALDHALKLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            I  G                    T         L  E    +  PL  L K + 
Sbjct: 112 KIATGHYARVKEIDKVSYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDI 167


>gi|317011534|gb|ADU85281.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter pylori
           SouthAfrica7]
          Length = 342

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 50/176 (28%), Gaps = 15/176 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS       ++   +  +         ++L          ++   K  +
Sbjct: 2   KIAVLLSGGVDSSYSAYSLKEQGHELVGIY--------LKLHASEKKHDLYIKNAQKACE 53

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG    L +        S++        ++   PN       ++    A   A +LG  
Sbjct: 54  FLGIP--LEVLDFQKDFKSAVYDAFIAAYEEGQTPNPCALCNPLMKFGLALDHALKLGCE 111

Query: 130 NIVIGVCET-----DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            I  G           S   +    T         L  E    +  PL  L K + 
Sbjct: 112 KIATGHYARIKEIDQVSYIREALDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDI 167


>gi|256380515|ref|YP_003104175.1| GMP synthase [Actinosynnema mirum DSM 43827]
 gi|255924818|gb|ACU40329.1| GMP synthase, large subunit [Actinosynnema mirum DSM 43827]
          Length = 519

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 52/185 (28%), Gaps = 16/185 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+   +       DR+  +  D+G     E                 + 
Sbjct: 221 RAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGERTQVER----------DFV 270

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            S G + +   A    +   +   +   K +        V  +    L      A     
Sbjct: 271 ASTGVNLVTVDARQRFLDALAGVTDPEEKRKIIGREFIRVFEQAERDL-----KAEGDYG 325

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +    +  PL  L K E  K+  ++G
Sbjct: 326 FLVQGTLYPDVVESGGGAGAANIKSHHNVGGLPDDLQFELVEPLRALFKDEVRKVGAELG 385

Query: 189 GQDLV 193
             + +
Sbjct: 386 LPETI 390


>gi|168334381|ref|ZP_02692565.1| Argininosuccinate synthase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 403

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 2/86 (2%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM- 64
               +L FSGG D+S  + W  + +   V  +  + GQ  ++           + +L  
Sbjct: 1  MKEKVVLAFSGGLDTSVIVPWLRENYDYDVIAVCINVGQDKELXGLEDRAKAMGVAKLYI 60

Query: 65 PKWKDSLGEDHILPLAILGDISHSSL 90
             K+   +D+I P+   G I  S  
Sbjct: 61 EDVKEEFAKDYIFPMLKSGAIYESRY 86


>gi|326930372|ref|XP_003211321.1| PREDICTED: argininosuccinate synthase-like [Meleagris gallopavo]
          Length = 382

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/201 (10%), Positives = 50/201 (24%), Gaps = 24/201 (11%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +   + +L +SGG D+S  L W  ++   V     + GQ+                + 
Sbjct: 1   MAEPRDTVVLAYSGGLDTSCILVWLKEQGYTVIAFLANIGQKEDF-------------DA 47

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
             K   +LG + +    +  +     +   V       +                   +A
Sbjct: 48  ARKKALALGAEKVYIQDVCREFVEEFIWPAVQANALYEDRYLLGTALARPCIARRLVLVA 107

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              G   I  G      +              +   +        +              
Sbjct: 108 KEQGARYIAHGAT-GKGNDQVRFELSCYALCPSIKVIAPWRMPEFYQRFPGR-------- 158

Query: 184 AQDIGGQDLVNLILEE-SHTC 203
            +++         L+  + TC
Sbjct: 159 -RELMEYAQNRAPLDLYTKTC 178


>gi|261867343|ref|YP_003255265.1| tRNA-specific 2-thiouridylase MnmA [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261412675|gb|ACX82046.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 383

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 37/140 (26%), Gaps = 4/140 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 +   SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 21  NATKKIICGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 77

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     ++            +  + I F  F    A  
Sbjct: 78  AVCDKLG-IKLHKINFAAEYWDNVFEHFLSEYKAGRTPNPDILCNKEIKFKAFLEYAAED 136

Query: 126 LGITNIVIGVCETDYSGYPD 145
           LG   I  G          +
Sbjct: 137 LGANYIATGHYVRRRGADDN 156


>gi|227499265|ref|ZP_03929377.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Anaerococcus tetradius ATCC 35098]
 gi|227218674|gb|EEI83905.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Anaerococcus tetradius ATCC 35098]
          Length = 367

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 48/192 (25%), Gaps = 12/192 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D  KK    ++  SGG DSS       +    V  +          +      V    
Sbjct: 1   MKD--KKDTKVVVGISGGVDSSVAALLLKEEGYDVVGIFMKNW-----DDTDENGVCTAE 53

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           V+           D            +  +      + +    PN  +     I      
Sbjct: 54  VDYEDAVAVCNQIDIPYYSINFEKEYYDRVFTYFLDEYKKGRTPNPDIMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYP---DCRHDTIRAIETAI--NLGMESHVTVHTPLMWL 175
             A  LG   +  G               R       +T     L  E    V  P+  L
Sbjct: 114 DFAKSLGADFVATGHYARVDRSADETVMLRGVDSNKDQTYFLSQLSQEQIKDVLFPVGEL 173

Query: 176 KKYETWKLAQDI 187
           +K +  ++A   
Sbjct: 174 EKSQVREIAHKY 185


>gi|268590514|ref|ZP_06124735.1| tRNA(Ile)-lysidine synthetase [Providencia rettgeri DSM 1131]
 gi|291314100|gb|EFE54553.1| tRNA(Ile)-lysidine synthetase [Providencia rettgeri DSM 1131]
          Length = 450

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 39/124 (31%), Gaps = 11/124 (8%)

Query: 10  SALLLFSGGQDSSTCLS--WALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
             L+ FSGG DS+  L   + + +       +  +   +G              +   +L
Sbjct: 21  KILVGFSGGIDSTVLLHALYLIRQQRLPSLEIRAIHIHHG-----LNRKANEWEQHCAQL 75

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
             +W       H++  +    I  ++         ++       V  +++        LA
Sbjct: 76  CSQWDIPFICRHVVVDSSQKGIEAAAREARYQAYREELQEGEVLVTAQHLDDQAETFMLA 135

Query: 124 YRLG 127
            + G
Sbjct: 136 LKRG 139


>gi|205821882|sp|A0QJE5|MNMA_MYCA1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 358

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 41/181 (22%), Gaps = 4/181 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL-MPKWK 68
             L   SGG DSS   +  +D    V  +                    K       +  
Sbjct: 2   RVLAAMSGGVDSSVAAARMVDAGHDVVGVHLALSTAPGTLRTGSRGCCSKEDASDARRVA 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D LG    +      +   + +             PN  V     I     +  A  LG 
Sbjct: 62  DVLGIPFYVW--DFAEKFQADVIDEFVSAYARGETPNPCVTCNQKIKFSALSAKAVALGF 119

Query: 129 TNIVIGVCETDYSGY-PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +  G       G                  L  E       P+    K +  + A   
Sbjct: 120 DAVATGHYARLSGGRLRRAVDKDKDQSYVLAVLSAEQLRHAAFPIGDTPKPQIREEAARR 179

Query: 188 G 188
           G
Sbjct: 180 G 180


>gi|55380003|ref|YP_137853.1| GMP synthase subunit B [Haloarcula marismortui ATCC 43049]
 gi|57012760|sp|Q5UX56|GUAAB_HALMA RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
           AltName: Full=GMP synthetase
 gi|55232728|gb|AAV48147.1| GMP synthase [Haloarcula marismortui ATCC 43049]
          Length = 305

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 47/144 (32%), Gaps = 13/144 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG---------QRNKVELECRLCVRK 58
             A++  SGG DSST  + A +   D++  +  D G          R   +    L + +
Sbjct: 22  KHAVIGLSGGVDSSTAAALAYEAIGDQLTAVYVDTGLMRKGETDEIRETFDYMDSLRIVE 81

Query: 59  KIVELMPKWKDSLGED---HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
                + + +     +   HI+    + +    +   +    +Q    P+       I  
Sbjct: 82  AQDRFLDELEGETDPEEKRHIIGEQFIREFETVAREVDADYLVQGTIYPDRIESEGTIKS 141

Query: 116 LVFAATLAYRLGITNIVIGVCETD 139
                 L  R+    IV  + +  
Sbjct: 142 HHNVGGLPERIDFDGIVEPMRDLY 165


>gi|32474336|ref|NP_867330.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Rhodopirellula baltica SH 1]
 gi|81657396|sp|Q7TTZ4|MNMA_RHOBA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|32444874|emb|CAD74876.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Rhodopirellula baltica SH 1]
          Length = 399

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 13/34 (38%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
            +L  SGG DSS      L     V  +   +G
Sbjct: 3  RVVLAMSGGVDSSVAAHLLLRDGHEVIGVFMRHG 36


>gi|13357963|ref|NP_078237.1| tRNA-(5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Ureaplasma parvum serovar 3 str. ATCC 700970]
 gi|170762343|ref|YP_001752485.1| tRNA-specific 2-thiouridylase MnmA [Ureaplasma parvum serovar 3
           str. ATCC 27815]
 gi|171920416|ref|ZP_02931735.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ureaplasma parvum serovar 1 str. ATCC 27813]
 gi|183508565|ref|ZP_02958082.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ureaplasma parvum serovar 14 str. ATCC 33697]
 gi|186701789|ref|ZP_02971467.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ureaplasma parvum serovar 6 str. ATCC 27818]
 gi|14195293|sp|Q9PQ88|MNMA_UREPA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|189040514|sp|B1AJ41|MNMA_UREP2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|11277497|pir||H82896 tRNA-(5-methylaminomethyl-2-thiouridylate) methyltransferase UU402
           [imported] - Ureaplasma urealyticum
 gi|6899388|gb|AAF30812.1|AE002137_11 tRNA-(5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Ureaplasma parvum serovar 3 str. ATCC 700970]
 gi|168827920|gb|ACA33182.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ureaplasma parvum serovar 3 str. ATCC 27815]
 gi|171902858|gb|EDT49147.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ureaplasma parvum serovar 1 str. ATCC 27813]
 gi|182676011|gb|EDT87916.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ureaplasma parvum serovar 14 str. ATCC 33697]
 gi|186701067|gb|EDU19349.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ureaplasma parvum serovar 6 str. ATCC 27818]
          Length = 385

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 50/192 (26%), Gaps = 25/192 (13%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSF------------------DYGQRNKVELECRLCV 56
            SGG DSS            V  L                      G  ++++ +    V
Sbjct: 13  LSGGVDSSVSALLLKQEGYEVIGLFMSNWDTIANFENNHEFNKTHQGCESELDYQDAQAV 72

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
            +KI            E        + +   S   KN       + L N F+   + +  
Sbjct: 73  AQKIG-----IPLYRVEFIKEYWDNVFEYFLSEYQKNRTPNP--DILCNQFIKFDSFLNY 125

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
                 A  + + +      + + S                 NL       V  P+  L 
Sbjct: 126 AKNELQADYIAMGHYARVKHDRNSSFLLKAIDTNKDQTYFLCNLNQNQLQNVLFPIGHLT 185

Query: 177 KYETWKLAQDIG 188
           K +   +A+  G
Sbjct: 186 KLQVRAIAKKHG 197


>gi|333008365|gb|EGK27839.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Shigella flexneri K-272]
          Length = 357

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 50/179 (27%), Gaps = 9/179 (5%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS        +  +VE L     + +  E  C       + +          E 
Sbjct: 1   MSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC--TAAADLADAQAVCDKLGIEL 58

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
           H +      +   +     +A            +  + I F  F    A  LG   I  G
Sbjct: 59  HTVN--FAAEYWDNVFKLFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATG 116

Query: 135 VCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                       R                 L  E       P+  L+K +  K+A+D+G
Sbjct: 117 HYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLG 175


>gi|328954894|ref|YP_004372227.1| GMP synthase (glutamine-hydrolyzing) [Coriobacterium glomerans PW2]
 gi|328455218|gb|AEB06412.1| GMP synthase (glutamine-hydrolyzing) [Coriobacterium glomerans PW2]
          Length = 526

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/182 (13%), Positives = 45/182 (24%), Gaps = 16/182 (8%)

Query: 10  SALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +L  SGG DSS   +  A     R+  +  ++G   K E E    +            
Sbjct: 218 RVILALSGGVDSSVVAALCARAIGPRLTCVFINHGLLRKNEPEQVEEI------------ 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   +    +      +      +  ++               +         L  
Sbjct: 266 --FSSQFDVDFVHVHAEERYAALLAGVVDPEEKRRIIGTQFWEEFFAVAQRTGGVRFL-A 322

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
              +        +     R  TI++    I         +  PL    K E  +L   +G
Sbjct: 323 QGTIYPDIIESGARKTGGRAATIKSHHNLIPFPEGVSFDLIEPLDHFFKDEVRELGLQLG 382

Query: 189 GQ 190
             
Sbjct: 383 LP 384


>gi|317181057|dbj|BAJ58843.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Helicobacter pylori F32]
          Length = 342

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 48/176 (27%), Gaps = 15/176 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS       ++   +  +         ++L          ++   K  +
Sbjct: 2   KIAVLLSGGVDSSYSAYSLKEQGHELVGIY--------LKLHASEKKHDLYIKNAQKACE 53

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG    L +        S++        ++   PN       ++    A   A +LG  
Sbjct: 54  FLGIP--LEVLDFQKDFKSAVYDEFISAYEEGQTPNPCALCNPLMKFGLALDHALKLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            I  G                    T         L  E    +  PL  L K + 
Sbjct: 112 KIATGHYARVKEIDKVSYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDI 167


>gi|312879913|ref|ZP_07739713.1| argininosuccinate synthase [Aminomonas paucivorans DSM 12260]
 gi|310783204|gb|EFQ23602.1| argininosuccinate synthase [Aminomonas paucivorans DSM 12260]
          Length = 419

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 22/40 (55%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
          ++     +L +SGG D+S  + W  D+   V T++ D GQ
Sbjct: 1  MEYKGKVVLAYSGGLDTSVAIQWLKDQGYDVVTMTADVGQ 40


>gi|301162405|emb|CBW21950.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides fragilis 638R]
          Length = 353

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 49/181 (27%), Gaps = 7/181 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
            L SGG DSS  +    ++  +        G      ++C     + I       +    
Sbjct: 5   ALLSGGVDSSVVVHLLCEQGYKPTLFYIKIGMDGAEYMDCS--AEEDIELCTAIARRYGL 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
              ++ L    +   +     +    +        +  + I F  F   +     +T   
Sbjct: 63  ALEVVDLH--REYWDNVAAYAIEKIRKGQTPNPDVMCNKLIKFGCFEQQVGKDFDLTATG 120

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLAQDIGG 189
                    G            +    L    ++ V     P+  L K+E  ++A   G 
Sbjct: 121 HYATTLQLGGKTWLGTAKDPIKDQTDFLAQIDYLQVSKLLFPIGGLMKHEVREIALQAGL 180

Query: 190 Q 190
            
Sbjct: 181 P 181


>gi|296116217|ref|ZP_06834835.1| argininosuccinate synthase [Gluconacetobacter hansenii ATCC 23769]
 gi|295977323|gb|EFG84083.1| argininosuccinate synthase [Gluconacetobacter hansenii ATCC 23769]
          Length = 409

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 47/156 (30%), Gaps = 7/156 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K     +L +SGG D+S  L W        V T + D GQ  ++E        +K  E+ 
Sbjct: 4   KDVKKVVLAYSGGLDTSVILRWLQTAYGCEVVTFTADLGQGEELEP------ARKKAEMF 57

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +  + +     +         +        +   ++    +  R I         A 
Sbjct: 58  GVKEIFVEDLRETFVKDFVFPMFRANALYEGQYLLGTSIARPLIAQRQIEIAEQVGADAV 117

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
             G T         + + Y      T+ A     +L
Sbjct: 118 AHGATGKGNDQVRFELAYYALKPDITVIAPWREWDL 153


>gi|238761162|ref|ZP_04622139.1| Argininosuccinate synthase [Yersinia kristensenii ATCC 33638]
 gi|238761415|ref|ZP_04622391.1| Argininosuccinate synthase [Yersinia kristensenii ATCC 33638]
 gi|238700389|gb|EEP93130.1| Argininosuccinate synthase [Yersinia kristensenii ATCC 33638]
 gi|238700642|gb|EEP93382.1| Argininosuccinate synthase [Yersinia kristensenii ATCC 33638]
          Length = 454

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 3/72 (4%)

Query: 1  MNDIIKK---APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I+K         + FSGG D+S  L W   +       + + GQ ++ + E      
Sbjct: 1  MTTILKHLPINQRVGIAFSGGLDTSAALLWMQKKGAIPYAYTANLGQPDEEDYEAIPRKA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 MEYGAEKARLID 72


>gi|257387449|ref|YP_003177222.1| GMP synthase subunit B [Halomicrobium mukohataei DSM 12286]
 gi|257169756|gb|ACV47515.1| GMP synthase, large subunit [Halomicrobium mukohataei DSM 12286]
          Length = 305

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 61/187 (32%), Gaps = 28/187 (14%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            +A++  SGG DSST  + A +   D++  +  D G   K E            + + + 
Sbjct: 22  ENAVIALSGGVDSSTAAALAYEAIGDQLTPVYVDTGLMRKGET-----------DEIRET 70

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D +    I+             T      ++    P          F+    T+A  + 
Sbjct: 71  FDYMDSLRIVD-----------ATDRFLDALEGETDPEEKRHIIGEQFIREFETVAKDVD 119

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-VHTPLMWLKKYETWKLAQD 186
              +V                 TI++      L        +  P+  L K E  ++A+ 
Sbjct: 120 ADYLVQ----GTIYPDRIESEGTIKSHHNVGGLPEVVDFEGIVEPMRDLYKDEVREVARA 175

Query: 187 IGGQDLV 193
           +  ++++
Sbjct: 176 LDLEEII 182


>gi|260881783|ref|ZP_05405216.2| GMP synthase [Mitsuokella multacida DSM 20544]
 gi|260847878|gb|EEX67885.1| GMP synthase [Mitsuokella multacida DSM 20544]
          Length = 511

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 53/187 (28%), Gaps = 21/187 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            AL   SGG DSS            ++  +  D+G   K E +    V            
Sbjct: 216 KALCALSGGVDSSVAAVLLSKAIGKQLTCVFVDHGLLRKDEGDQVEAV------------ 263

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G +    L  +   +     + +    +               F+      A ++G 
Sbjct: 264 --FGPEGPYDLNFIRVNAKDRFYEKLKGVTEPEKKRKII----GEEFIRVFEEEAKKIGA 317

Query: 129 -TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLAQD 186
              +V G    D       +   I++      L        +  PL  L K E     ++
Sbjct: 318 VDYLVQGTIYPDVIESGLGKSAVIKSHHNVGGLPDFVDFKEIVEPLRLLFKDEVRAAGRE 377

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 378 LGLPEYL 384


>gi|124515287|gb|EAY56797.1| GMP synthase [glutamine-hydrolyzing] [Leptospirillum rubarum]
          Length = 516

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 49/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           +   SGG DS+           DR +    D G     E      + + + EL       
Sbjct: 223 ICALSGGIDSTVTALLCHKALGDRFQAFYVDNGLMRMGE---SEQIVRDLKELS--LPLK 277

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
             +   + L  L  +      + +  K   +   +  +        +             
Sbjct: 278 PVDAGKIFLDRLKGVKDPERKRKIIGKTFIDVFWSEAMTLPVRPRFLAQG---------- 327

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
                 +   S         I++      L  ++   +  PL  L K E  ++   +G  
Sbjct: 328 --TLYPDVIESISHKGPSSMIKSHHNVGGLPKKNPFRLVEPLRDLFKDEVRRMGLKLGLP 385

Query: 191 D 191
           D
Sbjct: 386 D 386


>gi|22126476|ref|NP_669899.1| argininosuccinate synthase [Yersinia pestis KIM 10]
 gi|45441281|ref|NP_992820.1| argininosuccinate synthase [Yersinia pestis biovar Microtus str.
          91001]
 gi|21959470|gb|AAM86150.1|AE013861_7 argininosuccinate synthetase [Yersinia pestis KIM 10]
 gi|45436141|gb|AAS61697.1| argininosuccinate synthase [Yersinia pestis biovar Microtus str.
          91001]
          Length = 456

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 3/72 (4%)

Query: 1  MNDIIKK---APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I+K         + FSGG D+S  L W   +       + + GQ ++ + E      
Sbjct: 2  MTTILKHLPINQRVGIAFSGGLDTSAALLWMQKKGAIPYAYTANLGQPDEEDYEAIPRKA 61

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 62 MEYGAEKARLID 73


>gi|51595916|ref|YP_070107.1| argininosuccinate synthase [Yersinia pseudotuberculosis IP 32953]
 gi|108812571|ref|YP_648338.1| argininosuccinate synthase [Yersinia pestis Nepal516]
 gi|145598692|ref|YP_001162768.1| argininosuccinate synthase [Yersinia pestis Pestoides F]
 gi|149366488|ref|ZP_01888522.1| argininosuccinate synthase [Yersinia pestis CA88-4125]
 gi|153950059|ref|YP_001401377.1| argininosuccinate synthase [Yersinia pseudotuberculosis IP 31758]
 gi|162421528|ref|YP_001606190.1| argininosuccinate synthase [Yersinia pestis Angola]
 gi|165925445|ref|ZP_02221277.1| argininosuccinate synthase [Yersinia pestis biovar Orientalis
          str. F1991016]
 gi|165939587|ref|ZP_02228132.1| argininosuccinate synthase [Yersinia pestis biovar Orientalis
          str. IP275]
 gi|166009334|ref|ZP_02230232.1| argininosuccinate synthase [Yersinia pestis biovar Antiqua str.
          E1979001]
 gi|166211400|ref|ZP_02237435.1| argininosuccinate synthase [Yersinia pestis biovar Antiqua str.
          B42003004]
 gi|167400219|ref|ZP_02305732.1| argininosuccinate synthase [Yersinia pestis biovar Antiqua str.
          UG05-0454]
 gi|167421751|ref|ZP_02313504.1| argininosuccinate synthase [Yersinia pestis biovar Orientalis
          str. MG05-1020]
 gi|167424326|ref|ZP_02316079.1| argininosuccinate synthase [Yersinia pestis biovar Mediaevalis
          str. K1973002]
 gi|170024730|ref|YP_001721235.1| argininosuccinate synthase [Yersinia pseudotuberculosis YPIII]
 gi|186895007|ref|YP_001872119.1| argininosuccinate synthase [Yersinia pseudotuberculosis PB1/+]
 gi|218928708|ref|YP_002346583.1| argininosuccinate synthase [Yersinia pestis CO92]
 gi|229841555|ref|ZP_04461714.1| argininosuccinate synthetase [Yersinia pestis biovar Orientalis
          str. PEXU2]
 gi|229843666|ref|ZP_04463809.1| argininosuccinate synthetase [Yersinia pestis biovar Orientalis
          str. India 195]
 gi|229894230|ref|ZP_04509413.1| argininosuccinate synthetase [Yersinia pestis Pestoides A]
 gi|229902960|ref|ZP_04518077.1| argininosuccinate synthetase [Yersinia pestis Nepal516]
 gi|294503543|ref|YP_003567605.1| argininosuccinate synthase [Yersinia pestis Z176003]
 gi|24211513|sp|Q8ZFV7|ASSY_YERPE RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|81691807|sp|Q66C31|ASSY_YERPS RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|123246354|sp|Q1CGZ2|ASSY_YERPN RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|166221031|sp|A4TKI3|ASSY_YERPP RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|166989399|sp|A7FJE9|ASSY_YERP3 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|226729231|sp|B2JZQ2|ASSY_YERPB RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|226729232|sp|A9R622|ASSY_YERPG RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|226729233|sp|B1JPT9|ASSY_YERPY RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|51589198|emb|CAH20818.1| argininosuccinate synthase [Yersinia pseudotuberculosis IP 32953]
 gi|108776219|gb|ABG18738.1| argininosuccinate synthase [Yersinia pestis Nepal516]
 gi|115347319|emb|CAL20215.1| argininosuccinate synthase [Yersinia pestis CO92]
 gi|145210388|gb|ABP39795.1| argininosuccinate synthase [Yersinia pestis Pestoides F]
 gi|149290862|gb|EDM40937.1| argininosuccinate synthase [Yersinia pestis CA88-4125]
 gi|152961554|gb|ABS49015.1| argininosuccinate synthase [Yersinia pseudotuberculosis IP 31758]
 gi|162354343|gb|ABX88291.1| argininosuccinate synthase [Yersinia pestis Angola]
 gi|165912503|gb|EDR31135.1| argininosuccinate synthase [Yersinia pestis biovar Orientalis
          str. IP275]
 gi|165922554|gb|EDR39705.1| argininosuccinate synthase [Yersinia pestis biovar Orientalis
          str. F1991016]
 gi|165991889|gb|EDR44190.1| argininosuccinate synthase [Yersinia pestis biovar Antiqua str.
          E1979001]
 gi|166207171|gb|EDR51651.1| argininosuccinate synthase [Yersinia pestis biovar Antiqua str.
          B42003004]
 gi|166960236|gb|EDR56257.1| argininosuccinate synthase [Yersinia pestis biovar Orientalis
          str. MG05-1020]
 gi|167050168|gb|EDR61576.1| argininosuccinate synthase [Yersinia pestis biovar Antiqua str.
          UG05-0454]
 gi|167057175|gb|EDR66938.1| argininosuccinate synthase [Yersinia pestis biovar Mediaevalis
          str. K1973002]
 gi|169751264|gb|ACA68782.1| Argininosuccinate synthase [Yersinia pseudotuberculosis YPIII]
 gi|186698033|gb|ACC88662.1| argininosuccinate synthase [Yersinia pseudotuberculosis PB1/+]
 gi|229680407|gb|EEO76506.1| argininosuccinate synthetase [Yersinia pestis Nepal516]
 gi|229689274|gb|EEO81337.1| argininosuccinate synthetase [Yersinia pestis biovar Orientalis
          str. India 195]
 gi|229697921|gb|EEO87968.1| argininosuccinate synthetase [Yersinia pestis biovar Orientalis
          str. PEXU2]
 gi|229703628|gb|EEO90644.1| argininosuccinate synthetase [Yersinia pestis Pestoides A]
 gi|262361585|gb|ACY58306.1| argininosuccinate synthase [Yersinia pestis D106004]
 gi|262365674|gb|ACY62231.1| argininosuccinate synthase [Yersinia pestis D182038]
 gi|294354002|gb|ADE64343.1| argininosuccinate synthase [Yersinia pestis Z176003]
 gi|320015559|gb|ADV99130.1| argininosuccinate synthetase [Yersinia pestis biovar Medievalis
          str. Harbin 35]
          Length = 455

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 3/72 (4%)

Query: 1  MNDIIKK---APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I+K         + FSGG D+S  L W   +       + + GQ ++ + E      
Sbjct: 1  MTTILKHLPINQRVGIAFSGGLDTSAALLWMQKKGAIPYAYTANLGQPDEEDYEAIPRKA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 MEYGAEKARLID 72


>gi|332188159|ref|ZP_08389888.1| argininosuccinate synthase [Sphingomonas sp. S17]
 gi|332011766|gb|EGI53842.1| argininosuccinate synthase [Sphingomonas sp. S17]
          Length = 406

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 43/158 (27%), Gaps = 5/158 (3%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +     +L +SGG D+S  L W        V T + D GQ  ++E        +    
Sbjct: 1   MSEDIKRVVLAYSGGLDTSVILKWLQQHYGCEVVTFTADLGQGEELEP--ARKKAEMAGV 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                      +  +   +       +      + +   ++    +  R I         
Sbjct: 59  KPEHIFIDDLREEFVKDYVF--PMMRANALYEGLYLLGTSIARPLIAKRQIEIAKMVNAD 116

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         +   Y       + A     +L
Sbjct: 117 AVSHGATGKGNDQVRFELGYYALNPDIKVIAPWREWDL 154


>gi|294783011|ref|ZP_06748335.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium sp. 1_1_41FAA]
 gi|294479889|gb|EFG27666.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium sp. 1_1_41FAA]
          Length = 362

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 55/192 (28%), Gaps = 17/192 (8%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           KK     +  SGG DSST       +   +  ++           +      KK+     
Sbjct: 21  KKGIKVGVAMSGGVDSSTVAYLLKQQGYDIFGVTM-------KTFKDEDSDAKKVC---- 69

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D   E ++L +    +     +   V   +         V  R  I           
Sbjct: 70  --GDLGIEHYVLDVRD--EFKEKVMDYFVNEYMNGRTPNPCMVCNR-HIKFGKMLDFILS 124

Query: 126 LGITNIVIGVCETDYSGYPDCRHD-TIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            G + +  G      +G      D     +     +  +    +  P+  L+K +  +LA
Sbjct: 125 KGASFMATGHYTKLKNGLLSVGDDSNKDQVYFLSQIQKDRLSKIIFPVGDLEKPKLRELA 184

Query: 185 QDIGGQDLVNLI 196
           + IG +      
Sbjct: 185 KQIGVRVYSKKD 196


>gi|222085029|ref|YP_002543558.1| argininosuccinate synthase protein [Agrobacterium radiobacter
          K84]
 gi|221722477|gb|ACM25633.1| argininosuccinate synthase protein [Agrobacterium radiobacter
          K84]
          Length = 407

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 2/78 (2%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          +IK     +L +SGG D+S  L W  + +   V T + D GQ  ++E          I +
Sbjct: 1  MIKDIKKIVLSYSGGLDTSIILKWLQETYKCEVVTFTADLGQGEELEPARAKAEMLAIKD 60

Query: 63 LMPK-WKDSLGEDHILPL 79
          +     ++    D + P+
Sbjct: 61 IRIVDVREEFVRDFVFPM 78


>gi|161353438|ref|NP_208127.2| tRNA-specific 2-thiouridylase MnmA [Helicobacter pylori 26695]
 gi|205371769|sp|O25893|MNMA_HELPY RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 342

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 48/176 (27%), Gaps = 15/176 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS       ++   +  +         ++L          ++   K  +
Sbjct: 2   KIAVLLSGGVDSSYSAYSLKEQGHELVGIY--------LKLHASEKKHDLYIKNAQKACE 53

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG    L +        S++        ++   PN       ++    A   A +LG  
Sbjct: 54  FLGIP--LEVLDFQKDFKSAVYDEFINAYEEGQTPNPCALCNPLMKFGLALDHALKLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            I  G                    T         L  E    +  PL  L K + 
Sbjct: 112 KIATGHYARVKEIDKISYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDI 167


>gi|296332078|ref|ZP_06874542.1| argininosuccinate synthase [Bacillus subtilis subsp. spizizenii
          ATCC 6633]
 gi|305675527|ref|YP_003867199.1| argininosuccinate synthase [Bacillus subtilis subsp. spizizenii
          str. W23]
 gi|296150849|gb|EFG91734.1| argininosuccinate synthase [Bacillus subtilis subsp. spizizenii
          ATCC 6633]
 gi|305413771|gb|ADM38890.1| argininosuccinate synthase [Bacillus subtilis subsp. spizizenii
          str. W23]
          Length = 403

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          + +    +L +SGG D+S  + W  ++   V     D G
Sbjct: 1  MSEQKKVVLAYSGGLDTSVAIKWLQEQGYNVIACCLDVG 39


>gi|294495881|ref|YP_003542374.1| GMP synthase (glutamine-hydrolyzing) [Methanohalophilus mahii DSM
          5219]
 gi|292666880|gb|ADE36729.1| GMP synthase (glutamine-hydrolyzing) [Methanohalophilus mahii DSM
          5219]
          Length = 304

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 27/72 (37%), Gaps = 1/72 (1%)

Query: 6  KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          K     ++  SGG DSS C   A     D +  +  D G   K E E    +   +   +
Sbjct: 18 KAQGKTIIALSGGVDSSVCAVLAHRAIGDNLIPIYIDTGLMRKGETERIKEIFGDMNLQI 77

Query: 65 PKWKDSLGEDHI 76
             KD   ++ +
Sbjct: 78 IDAKDRFLDNLV 89


>gi|254779876|ref|YP_003057982.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter pylori B38]
 gi|254001788|emb|CAX30019.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Helicobacter pylori B38]
          Length = 342

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 48/176 (27%), Gaps = 15/176 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS       ++   +  +         ++L          ++   K  +
Sbjct: 2   KIAVLLSGGVDSSYSAYSLKEQGHELVGIY--------LKLHASEKKHDLYIKNAQKACE 53

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG    L +        S++        ++   PN       ++    A   A +LG  
Sbjct: 54  FLGIP--LEVLDFQKDFKSAVYDEFINAYEEGQTPNPCALCNPLMKFGLALDHALQLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            I  G                    T         L  E    +  PL  L K + 
Sbjct: 112 KIATGHYARVKEIDKISYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDI 167


>gi|227515369|ref|ZP_03945418.1| argininosuccinate synthase [Lactobacillus fermentum ATCC 14931]
 gi|227086283|gb|EEI21595.1| argininosuccinate synthase [Lactobacillus fermentum ATCC 14931]
          Length = 438

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 47/175 (26%), Gaps = 13/175 (7%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D +      +L +SGG D+S  ++W  ++   V     D G     E +    +++K   
Sbjct: 7   DELMAKEKVVLAYSGGLDTSVEIAWLKNKGYDVIACCIDVG-----EGKDLEAIKEK--- 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                   +G    + +    + +       +       N           + +     +
Sbjct: 59  -----GLKVGAVKSVVIDAKEEFASEYCLPALQAHAMYENKYPLVSALSRPLIVKKLVEV 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
           A   G T I  G                  A +  I   +          +   K
Sbjct: 114 AKENGATAIAHGCTGKGNDQVRFEVGIHALAPDMKIEDPIREVHWAREEEIDYAK 168


>gi|224373210|ref|YP_002607582.1| thiamine biosynthesis protein:ExsB [Nautilia profundicola AmH]
 gi|223588685|gb|ACM92421.1| thiamine biosynthesis protein:ExsB [Nautilia profundicola AmH]
          Length = 319

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 2/93 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+ LFSGG DS+  +    ++   +E +  D G     +      ++K   EL  K   
Sbjct: 2   KAIALFSGGLDSALAIKLIQEQNIEIEGVYIDVGFETNKQKT--EHLQKLADELGIKLTV 59

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNN 102
              ++  +   +   +       N  +    N 
Sbjct: 60  LDIKEQYIKEILFNPVYGYGKNMNPCIDCHANM 92


>gi|89896684|ref|YP_520171.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Desulfitobacterium hafniense Y51]
 gi|89336132|dbj|BAE85727.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 510

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 50/184 (27%), Gaps = 20/184 (10%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            L   SGG DSS           D++  +  D+G   K E E    +             
Sbjct: 218 VLCALSGGVDSSVAAVLVHKAIGDQLTCVFVDHGFMRKNEPEQVKKI------------- 264

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E   L L  +                +   +       R                I 
Sbjct: 265 -FTEQFHLKLIFVDARERFMAKIGGVSDPETKRIGIGNEFIRLFEDEARKLGQ-----ID 318

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G    D         +TI++      L  +    +  PL  L K E  ++  ++G 
Sbjct: 319 FLVQGTLYPDIVESGTDTAETIKSHHNVGGLPEDMQFELIEPLDMLFKDEVREVGAELGI 378

Query: 190 QDLV 193
            D +
Sbjct: 379 PDEI 382


>gi|47215507|emb|CAG01169.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 387

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 28/106 (26%), Gaps = 9/106 (8%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--------QRNKVELECRLCVRKKIVE 62
            +   SGG DSS        R   V  +                + + E    V + +  
Sbjct: 7   VVCAMSGGVDSSVAALLLKRRGYNVTGVFMKNWDLLDERGVCAAEKDCEDAYRVCQILDI 66

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFV 108
              +        H +   +L +      T N  +    +   N F 
Sbjct: 67  PFHQVSYVKEYWHKVFSDLLNEYEKG-RTPNPDILCNKHIKFNHFY 111


>gi|16079997|ref|NP_390823.1| argininosuccinate synthase [Bacillus subtilis subsp. subtilis
          str. 168]
 gi|221310889|ref|ZP_03592736.1| argininosuccinate synthase [Bacillus subtilis subsp. subtilis
          str. 168]
 gi|221315214|ref|ZP_03597019.1| argininosuccinate synthase [Bacillus subtilis subsp. subtilis
          str. NCIB 3610]
 gi|221320132|ref|ZP_03601426.1| argininosuccinate synthase [Bacillus subtilis subsp. subtilis
          str. JH642]
 gi|221324414|ref|ZP_03605708.1| argininosuccinate synthase [Bacillus subtilis subsp. subtilis
          str. SMY]
 gi|321312481|ref|YP_004204768.1| argininosuccinate synthase [Bacillus subtilis BSn5]
 gi|5915700|sp|O34347|ASSY_BACSU RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|2293242|gb|AAC00320.1| arginine succinate synthase [Bacillus subtilis]
 gi|2635410|emb|CAB14905.1| argininosuccinate synthase [Bacillus subtilis subsp. subtilis
          str. 168]
 gi|291485373|dbj|BAI86448.1| argininosuccinate synthase [Bacillus subtilis subsp. natto
          BEST195]
 gi|320018755|gb|ADV93741.1| argininosuccinate synthase [Bacillus subtilis BSn5]
          Length = 403

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          + +    +L +SGG D+S  + W  ++   V     D G
Sbjct: 1  MSEQKKVVLAYSGGLDTSVAIKWLQEQGYNVIACCLDVG 39


>gi|88812884|ref|ZP_01128128.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Nitrococcus mobilis Nb-231]
 gi|88789806|gb|EAR20929.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Nitrococcus mobilis Nb-231]
          Length = 374

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/143 (13%), Positives = 42/143 (29%), Gaps = 5/143 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      ++  SGG DS+      L++   ++ L     + +     C     + +    
Sbjct: 1   MSPRTRYIVGLSGGVDSAVAALLLLEQGHAIQGLFMRNWEDDDTATYCS--AEQDLAYAK 58

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     H+   A       + +  +   + +  + PN  +     I        A 
Sbjct: 59  QVCAQLDIPLHV---ANFAHEYRAEVFDHCLREYRRGHTPNPDILCNQRIKFHAFINYAQ 115

Query: 125 RLGITNIVIGVCETDYSGYPDCR 147
           RLG  +I  G    +   +    
Sbjct: 116 RLGTDHIATGHYARNIERHGTYH 138


>gi|219667493|ref|YP_002457928.1| GMP synthase [Desulfitobacterium hafniense DCB-2]
 gi|219537753|gb|ACL19492.1| GMP synthase, large subunit [Desulfitobacterium hafniense DCB-2]
          Length = 510

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 50/184 (27%), Gaps = 20/184 (10%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            L   SGG DSS           D++  +  D+G   K E E    +             
Sbjct: 218 VLCALSGGVDSSVAAVLVHKAIGDQLTCVFVDHGFMRKNEPEQVKKI------------- 264

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E   L L  +                +   +       R                I 
Sbjct: 265 -FTEQFHLKLIFVDARERFMAKIGGVSDPETKRIGIGNEFIRLFEDEARKLGQ-----ID 318

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G    D         +TI++      L  +    +  PL  L K E  ++  ++G 
Sbjct: 319 FLVQGTLYPDIVESGTDTAETIKSHHNVGGLPEDMQFELIEPLDMLFKDEVREVGAELGI 378

Query: 190 QDLV 193
            D +
Sbjct: 379 PDEI 382


>gi|291528653|emb|CBK94239.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain or B
           subunit/GMP synthase (glutamine-hydrolyzing), N-terminal
           domain or A subunit [Eubacterium rectale M104/1]
          Length = 524

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 48/185 (25%), Gaps = 16/185 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +        ++  +  D+G            +RK   + +    
Sbjct: 217 KVLLALSGGVDSSVLAALLAKAIGKQLTCVFVDHG-----------LLRKNEGDEVEGVF 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G   I  + +     + S    V    +           R              L  
Sbjct: 266 GKGGSFDINFVRVNAQERYYSKLAGVTEP-ERKRKIIGEEFIRVFEEEAKKIGKVDFLAQ 324

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I   V E   SG                         +  PL  L K E  K+  ++G
Sbjct: 325 GTIYPDVVE---SGLGGESAVIKSHHNVGGLPEHVDFKDIVEPLRNLFKDEVRKVGLELG 381

Query: 189 GQDLV 193
             D +
Sbjct: 382 LPDYL 386


>gi|291523877|emb|CBK89464.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain or B
           subunit/GMP synthase (glutamine-hydrolyzing), N-terminal
           domain or A subunit [Eubacterium rectale DSM 17629]
          Length = 524

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 48/185 (25%), Gaps = 16/185 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +        ++  +  D+G            +RK   + +    
Sbjct: 217 KVLLALSGGVDSSVLAALLAKAIGKQLTCVFVDHG-----------LLRKNEGDEVEGVF 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G   I  + +     + S    V    +           R              L  
Sbjct: 266 GKGGSFDINFVRVNAQERYYSKLAGVTEP-ERKRKIIGEEFIRVFEEEAKKIGKVDFLAQ 324

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I   V E   SG                         +  PL  L K E  K+  ++G
Sbjct: 325 GTIYPDVVE---SGLGGESAVIKSHHNVGGLPEHVDFKDIVEPLRNLFKDEVRKVGLELG 381

Query: 189 GQDLV 193
             D +
Sbjct: 382 LPDYL 386


>gi|182415638|ref|YP_001820704.1| tRNA-specific 2-thiouridylase MnmA [Opitutus terrae PB90-1]
 gi|205816897|sp|B1ZZ32|MNMA_OPITP RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|177842852|gb|ACB77104.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Opitutus terrae PB90-1]
          Length = 378

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 32/140 (22%), Gaps = 4/140 (2%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +  A   L+  SGG DSS        +   V              +       + I +  
Sbjct: 1   MPGAEKILVAMSGGVDSSVAALLLKQQGYDVVGAYMKNWINEDQVIGHCPWQ-QDIEDAR 59

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                   E  ++    L       +   +         PN  +     +      + A 
Sbjct: 60  RVATQIGIEFRVVN---LMREYRERVVAYLLDGYARGLTPNPDIMCNREVKFGVFRSWAK 116

Query: 125 RLGITNIVIGVCETDYSGYP 144
             G   I  G         P
Sbjct: 117 DHGFAAIATGHYAQRVEVKP 136


>gi|332974491|gb|EGK11413.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Desmospora sp. 8437]
          Length = 352

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 45/179 (25%), Gaps = 10/179 (5%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS       ++   V  L             C     +   ++           
Sbjct: 1   MSGGVDSSVAALLLKEQGYDVIGLFMKNWDDTDELGNC--TATEDFEDVRRVAGQLGIPY 58

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
           + +            + +    + +    PN  V     I        A +LG   I  G
Sbjct: 59  YSVN---FEKEYRDKVFQYFLDEYEKGRTPNPDVMCNKEIKFGEFMEKALQLGADYIATG 115

Query: 135 VCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                       R                 LG E       P+  L K E  K+A++ G
Sbjct: 116 HYARLEKTDGSHRLLRGADPNKDQTYFLYTLGQEQLSKTLFPIGHLHKKELRKIAEEAG 174


>gi|332669610|ref|YP_004452618.1| GMP synthase, large subunit [Cellulomonas fimi ATCC 484]
 gi|332338648|gb|AEE45231.1| GMP synthase, large subunit [Cellulomonas fimi ATCC 484]
          Length = 527

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 55/187 (29%), Gaps = 15/187 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS   +       D++  +  D+G     E      V K  V+      
Sbjct: 224 RVICGLSGGVDSSVAAALVQRAVGDQLTCVFVDHGLLRSGE---AEQVEKDFVDAT---- 276

Query: 69  DSLGEDHILP--LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +  ++      L  ++  +  +     I    +       R ++    A   A + 
Sbjct: 277 --GVQLKVVDARERFLHALAGHTDPETKRKIIGREFIRVFEDAAREVVEDAGAHGEAVK- 333

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +               I++      L  +    +  PL  L K E   +  +
Sbjct: 334 --FLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPDDLQFELVEPLRTLFKDEVRAVGLE 391

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 392 LGVPEAI 398


>gi|308185086|ref|YP_003929219.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter pylori SJM180]
 gi|308061006|gb|ADO02902.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter pylori SJM180]
          Length = 342

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 48/176 (27%), Gaps = 15/176 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS       ++   +  +         ++L          ++   K  +
Sbjct: 2   KIAVLLSGGVDSSYSAYSLKEQGHELVGIY--------LKLHASEKKHDLYIKNAQKACE 53

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG    L +        S++        ++   PN       ++    A   A +LG  
Sbjct: 54  FLGIP--LEVLDFQKDFKSAVYDEFISAYEEGQTPNPCALCNPLMKFGLALDHALKLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            I  G                    T         L  E    +  PL  L K + 
Sbjct: 112 KIATGHYARVKEIDKISYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDI 167


>gi|299783595|gb|ADJ41593.1| Argininosuccinate synthase [Lactobacillus fermentum CECT 5716]
          Length = 429

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 45/170 (26%), Gaps = 13/170 (7%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               +L +SGG D+S  ++W  ++   V     D G     E +    ++KK        
Sbjct: 3   KEKVVLAYSGGLDTSVEIAWLKNKGYDVIACCIDVG-----EGKDLEAIKKK-------- 49

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +G    + +    + +       +       N           + +     +A   G
Sbjct: 50  GLKVGAVKSVVIDAKEEFASEYCLPALQAHAMYENKYPLVSALSRPLIVKKLVEVAKENG 109

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
            T I  G                  A +  I   +          +   K
Sbjct: 110 ATAIAHGCTGKGNDQVRFEVGIHALAPDMKIEDPIREVHWAREEEIDYAK 159


>gi|297250385|ref|ZP_06864202.2| tRNA(Ile)-lysidine synthase [Neisseria polysaccharea ATCC 43768]
 gi|296839058|gb|EFH22996.1| tRNA(Ile)-lysidine synthase [Neisseria polysaccharea ATCC 43768]
          Length = 436

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/196 (11%), Positives = 46/196 (23%), Gaps = 31/196 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELM 64
               +  SGG DS   L   +    +     +T+   +G                     
Sbjct: 22  KKTAVALSGGLDSVVLLHLLVRAGKKGGFIPKTVHIHHG-----LSPRADAWADFCQNYC 76

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L    +        I  ++  K  A   +           R+     F   +A 
Sbjct: 77  DMLGVELETVKVCVEKNGLGIEAAARQKRYAAFAEKGFDVLALAHHRDDQIETFMLAVAR 136

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G+  +        +                           +  PL+   + + W  A
Sbjct: 137 GGGLRALAAMPAVRPFGENGI----------------------IWRPLLPFSRQDIWDYA 174

Query: 185 QDIGGQDLVNLILEES 200
           Q  G  ++ +    ++
Sbjct: 175 QKHGLPNIEDESNSDT 190


>gi|298206790|ref|YP_003714969.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Croceibacter atlanticus HTCC2559]
 gi|83849422|gb|EAP87290.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Croceibacter atlanticus HTCC2559]
          Length = 509

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/187 (11%), Positives = 47/187 (25%), Gaps = 19/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DS+             +  +  + G                   L   
Sbjct: 213 EDKVVLGLSGGVDSTVAAVLLHKAIGKNLYCIFVNNG------------------LLRKN 254

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               + + +      +  +  S+          D       +    I      A     +
Sbjct: 255 EFVDVLDQYKDMGLNVKGVDASARFLKALEGKSDPEEKRKEIGRVFIEVFDDEAHDIEDV 314

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                     +   S   +    TI++      L     + +  PL  L K E  ++ ++
Sbjct: 315 KFLAQGTIYPDVIESISVNGPSATIKSHHNVGGLPDFMKLKIVEPLRMLFKDEVRRVGKE 374

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 375 MGISPKL 381


>gi|313888971|ref|ZP_07822630.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312844957|gb|EFR32359.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 506

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 1/60 (1%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +       +++  +  D+G   K E +      K +     +  
Sbjct: 214 KVLLALSGGVDSSVTAALLSKAVGEKLTCIFVDHGLMRKNEGDEVEEAFKDLGMHFIRVD 273


>gi|306821577|ref|ZP_07455175.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Eubacterium yurii subsp. margaretiae ATCC 43715]
 gi|304550322|gb|EFM38315.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Eubacterium yurii subsp. margaretiae ATCC 43715]
          Length = 371

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/131 (12%), Positives = 33/131 (25%), Gaps = 6/131 (4%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               +L  SGG DSS       ++   V  +          ++       +   ++    
Sbjct: 5   KKKVILGMSGGVDSSVAAVILKEQGYDVTGIFMKNWDDKNDDMCTAK---QDYDDVRKVA 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                + + +            +      + +    PN  V     I        A +L 
Sbjct: 62  DSLGIDYYTVN---FEKQYWDEVFTYFLDEYKKGRTPNPDVMCNQEIKFKAFLDYALKLD 118

Query: 128 ITNIVIGVCET 138
              I +G    
Sbjct: 119 ADCIAMGHYAR 129


>gi|227488144|ref|ZP_03918460.1| argininosuccinate synthase [Corynebacterium glucuronolyticum ATCC
          51867]
 gi|227541542|ref|ZP_03971591.1| argininosuccinate synthase [Corynebacterium glucuronolyticum ATCC
          51866]
 gi|227092006|gb|EEI27318.1| argininosuccinate synthase [Corynebacterium glucuronolyticum ATCC
          51867]
 gi|227182698|gb|EEI63670.1| argininosuccinate synthase [Corynebacterium glucuronolyticum ATCC
          51866]
          Length = 401

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 19/53 (35%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
               +L +SGG D+S  +   A      V  ++ D GQ  +     R     
Sbjct: 1  MTTRVVLAYSGGLDTSVAIPYLAKQTGGEVVAVTIDLGQGGEDLETVRQRALD 53


>gi|152964718|ref|YP_001360502.1| GMP synthase [Kineococcus radiotolerans SRS30216]
 gi|151359235|gb|ABS02238.1| GMP synthase, large subunit [Kineococcus radiotolerans SRS30216]
          Length = 547

 Score = 47.6 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 48/187 (25%), Gaps = 19/187 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +       D++  +  D+G     E      V K  V       
Sbjct: 244 KVICALSGGVDSAVAGALVQRAVGDQLTCVFVDHGLLRAGE---AEQVEKDFVAAT---- 296

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + H++       +   +   +     +           R                 
Sbjct: 297 --GVKLHVVD-----AVQRFADALDGVSDPEQKRKIIGREFIRVFEQAARDVVAKEGTDG 349

Query: 129 TNIVIGVCETDY----SGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             +   V  T Y             TI++      L  +    +  PL  L K E   + 
Sbjct: 350 GEVRFLVQGTLYPDVVESGGGTGAATIKSHHNVGGLPDDLAFELVEPLRALFKDEVRAVG 409

Query: 185 QDIGGQD 191
             +G  +
Sbjct: 410 VQLGLPE 416


>gi|329116668|ref|ZP_08245385.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus parauberis NCFD 2020]
 gi|326907073|gb|EGE53987.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus parauberis NCFD 2020]
          Length = 372

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 48/191 (25%), Gaps = 11/191 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +       ++  SGG DSS       ++   V  +             C     +   ++
Sbjct: 1   MDNSNTRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDELGVC--TATEDYKDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      + +            + +    + +    PN  V     I        A
Sbjct: 59  AAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYKAGRTPNPDVMCNKEIKFKAFLDYA 115

Query: 124 YRLGITNIVIGVCET----DYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKK 177
             LG   +  G         Y      R       +T     L  +       PL  L+K
Sbjct: 116 MTLGADYVATGHYAQIERDQYGTVHMLRGVDNGKDQTYFLSQLSQKQLQKTLFPLGHLQK 175

Query: 178 YETWKLAQDIG 188
            E   +A+  G
Sbjct: 176 PEVRAIAEKAG 186


>gi|306840809|ref|ZP_07473556.1| GMP synthase [Brucella sp. BO2]
 gi|306289204|gb|EFM60453.1| GMP synthase [Brucella sp. BO2]
          Length = 520

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 59/185 (31%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DSS     A +   D++  +  D+G   K E        +++VE+   
Sbjct: 222 SGRVICALSGGVDSSVAALLAHEAVGDQLTCILVDHGLMRKDE-------AQQVVEMFR- 273

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 E + LPL ++                +        +              A  L
Sbjct: 274 ------EHYNLPLILVDASDRFIGALEGESDPEKKRKTIGRLFIEVFEEEARKLGGADFL 327

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+    +      TI++      L     + +  PL  L K E   L ++
Sbjct: 328 VQGTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMKMQLVEPLRELFKDEVRLLGKE 385

Query: 187 IGGQD 191
           +G  D
Sbjct: 386 LGLPD 390


>gi|269836239|ref|YP_003318467.1| argininosuccinate synthase [Sphaerobacter thermophilus DSM 20745]
 gi|269785502|gb|ACZ37645.1| argininosuccinate synthase [Sphaerobacter thermophilus DSM 20745]
          Length = 396

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 47/148 (31%), Gaps = 15/148 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               + +SGG DS+ C+  A ++    V  ++ D GQ    E E      K         
Sbjct: 2   KKIAVAYSGGLDSTLCIVLAREKYGAEVVPITVDVGQ---GEGEIAESFAKA-------- 50

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +     L +    + +   LT+ +         P +    R +I     A  A  LG
Sbjct: 51  --DVLGITPLLIDARAEFAEEWLTRAIRANSDYEGYPVSTSMTRQLIA-AKVAEKALELG 107

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIE 155
              ++ G        Y       + A +
Sbjct: 108 CDAVMEGSTGRGNDQYRMHNVFKLFAPQ 135


>gi|261876168|ref|YP_697160.2| tRNA(Ile)-lysidine synthetase [Clostridium perfringens ATCC 13124]
 gi|281185487|sp|Q0TMI0|TILS_CLOP1 RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|255529904|gb|ABG82412.2| tRNA(Ile)-lysidine synthetase [Clostridium perfringens ATCC 13124]
          Length = 469

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 33/124 (26%), Gaps = 9/124 (7%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALD----RFDRVETLSFDYGQRNKVELECRLCVR 57
           N +IK     L+  SGG DS   L    +        V     +    + +  E  L   
Sbjct: 12  NSMIKNGDKVLVALSGGPDSVCLLHILSELRELLHIEVYAAHVN----HCLRGESALKDE 67

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
             + EL             + +  + +  + S       +              + I + 
Sbjct: 68  AYVEELCKNLNIKCFV-KRVDINKISEEQNISTEMAGREERYKFFEELKNEYSLDKIAIA 126

Query: 118 FAAT 121
             A 
Sbjct: 127 HNAN 130


>gi|217967925|ref|YP_002353431.1| GMP synthase, large subunit [Dictyoglomus turgidum DSM 6724]
 gi|217337024|gb|ACK42817.1| GMP synthase, large subunit [Dictyoglomus turgidum DSM 6724]
          Length = 507

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 50/188 (26%), Gaps = 18/188 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DS+T          D++  +  D+G     E E      K +      
Sbjct: 210 ENKVLLAVSGGVDSTTLAVLLQRAIGDKLTAIFVDHGLLRIGEKEEVSRFLKDLG----- 264

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     + L ++             +  ++                         L
Sbjct: 265 ----------VNLVVIDARERFLEKLRGVIDPEEKRRVIGHEFVGVFKEEARKRGPFKFL 314

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+  S         I+       L  E    +  P  +L K E  K+A+ 
Sbjct: 315 AQGTLYPDVIESAASNTGMA--AKIKTHHNVGGLPEELGFELIEPFRYLFKDEVRKIAEI 372

Query: 187 IGGQDLVN 194
           +G    + 
Sbjct: 373 LGIPKDII 380


>gi|182626023|ref|ZP_02953786.1| tRNA(Ile)-lysidine synthetase [Clostridium perfringens D str.
           JGS1721]
 gi|177908730|gb|EDT71241.1| tRNA(Ile)-lysidine synthetase [Clostridium perfringens D str.
           JGS1721]
          Length = 469

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 33/124 (26%), Gaps = 9/124 (7%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALD----RFDRVETLSFDYGQRNKVELECRLCVR 57
           N +IK     L+  SGG DS   L    +        V     +    + +  E  L   
Sbjct: 12  NSMIKNGDKVLVALSGGPDSVCLLHILSELRELLHIEVYAAHVN----HCLRGESALKDE 67

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
             + EL             + +  + +  + S       +              + I + 
Sbjct: 68  AYVEELCKNLNIKCFV-KRVDINKISEEQNISTEMAGREERYKFFEELKNEYSLDKIAIA 126

Query: 118 FAAT 121
             A 
Sbjct: 127 HNAN 130


>gi|168218232|ref|ZP_02643857.1| tRNA(Ile)-lysidine synthetase [Clostridium perfringens NCTC 8239]
 gi|182379755|gb|EDT77234.1| tRNA(Ile)-lysidine synthetase [Clostridium perfringens NCTC 8239]
          Length = 469

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 33/124 (26%), Gaps = 9/124 (7%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALD----RFDRVETLSFDYGQRNKVELECRLCVR 57
           N +IK     L+  SGG DS   L    +        V     +    + +  E  L   
Sbjct: 12  NSMIKNGDKVLVALSGGPDSVCLLHILSELRELLHIEVYAAHVN----HCLRGESALKDE 67

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
             + EL             + +  + +  + S       +              + I + 
Sbjct: 68  AYVEELCKNLNIKCFV-KRVDINKISEEQNISTEMAGREERYKFFEELKNEYSLDKIAIA 126

Query: 118 FAAT 121
             A 
Sbjct: 127 HNAN 130


>gi|168206867|ref|ZP_02632872.1| tRNA(Ile)-lysidine synthetase [Clostridium perfringens E str.
           JGS1987]
 gi|168211206|ref|ZP_02636831.1| tRNA(Ile)-lysidine synthetase [Clostridium perfringens B str. ATCC
           3626]
 gi|170661729|gb|EDT14412.1| tRNA(Ile)-lysidine synthetase [Clostridium perfringens E str.
           JGS1987]
 gi|170710765|gb|EDT22947.1| tRNA(Ile)-lysidine synthetase [Clostridium perfringens B str. ATCC
           3626]
          Length = 469

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 33/124 (26%), Gaps = 9/124 (7%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALD----RFDRVETLSFDYGQRNKVELECRLCVR 57
           N +IK     L+  SGG DS   L    +        V     +    + +  E  L   
Sbjct: 12  NSMIKNGDKVLVALSGGPDSVCLLHILSELRELLHIEVYAAHVN----HCLRGESALKDE 67

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
             + EL             + +  + +  + S       +              + I + 
Sbjct: 68  AYVEELCKNLNIKCFV-KRVDINKISEEQNISTEMAGREERYKFFEELKNEYSLDKIAIA 126

Query: 118 FAAT 121
             A 
Sbjct: 127 HNAN 130


>gi|332685756|ref|YP_004455530.1| GMP synthase [Melissococcus plutonius ATCC 35311]
 gi|332369765|dbj|BAK20721.1| GMP synthase (glutamine-hydrolyzing) [Melissococcus plutonius ATCC
           35311]
          Length = 521

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 59/186 (31%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V + +       
Sbjct: 224 KRVLLGLSGGVDSSVVGVLLQKAIGDQLTCIFVDHGLLRKNE---AKQVMESLGGKFGLN 280

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       L +L  I      ++   K +       +V       L      A + G
Sbjct: 281 IIKVDAQKRF-LDLLKGI------EDPEKKRKIIGNEFVYVFDDEAKKL------AGQKG 327

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G   TD          TI++      L  + H  +  PL  L K E  +L   +
Sbjct: 328 IDFLAQGTLYTDVIESGTETAQTIKSHHNVGGLPEDMHFELIEPLNTLFKDEVRELGTQL 387

Query: 188 GGQDLV 193
           G  D +
Sbjct: 388 GMPDSI 393


>gi|298483766|ref|ZP_07001939.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides sp. D22]
 gi|295087550|emb|CBK69073.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides xylanisolvens XB1A]
 gi|298270060|gb|EFI11648.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides sp. D22]
          Length = 355

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 47/181 (25%), Gaps = 7/181 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
            L SGG DSS  +    ++  +        G      ++C     + I       +    
Sbjct: 5   ALLSGGVDSSVVVHLLCEQGYKPTLFYIKIGMDGAEYMDCS--AEEDIELSTATARKYGL 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
              ++ L    +   +     +    Q        +  + I F  F   +      T   
Sbjct: 63  SLEVVDLH--QEYWENVAAYAIDKIRQGLTPNPDVMCNKLIKFGCFEQRVGKDFDFTATG 120

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLAQDIGG 189
                    G            +    L    ++ V     P+  L K E  ++A   G 
Sbjct: 121 HYATTLQCDGKTWLGTAKDPVKDQTDFLAQIDYLQVSKLMFPIGGLMKQEVREIANRAGL 180

Query: 190 Q 190
            
Sbjct: 181 P 181


>gi|262306023|gb|ACY45604.1| gln amidotransferase [Carcinoscorpius rotundicauda]
          Length = 196

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 2/64 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDR-VETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              L+L SGG DS+ C +       +  +  +  + G   K E        +++   +  
Sbjct: 44  KKVLMLVSGGVDSTVCAALVHRALGEERLIAIHVNNGFMRKNESLQVEHSLRQLGLKLRV 103

Query: 67  WKDS 70
              S
Sbjct: 104 VDAS 107


>gi|195055254|ref|XP_001994534.1| GH17302 [Drosophila grimshawi]
 gi|193892297|gb|EDV91163.1| GH17302 [Drosophila grimshawi]
          Length = 420

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +L +SGG D+S  L W L++   V  +  D GQ  +   E       KI        
Sbjct: 4  DKVILAYSGGLDTSCILKWLLEQRYEVICVLADVGQ--QENFEAARQKALKIGAKEVIVA 61

Query: 69 D 69
          D
Sbjct: 62 D 62


>gi|126667269|ref|ZP_01738242.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Marinobacter sp. ELB17]
 gi|126628214|gb|EAZ98838.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Marinobacter sp. ELB17]
          Length = 374

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 33/130 (25%), Gaps = 5/130 (3%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS       ++  +VE L       +     C       + +          + 
Sbjct: 1   MSGGVDSSVAAWLLKEQGYQVEGLFMKNWDEDDGTEYC--TAMTDLADAQAVADHIGIKL 58

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
           H    A         + ++   + +    PN  +     +        A  LG   I  G
Sbjct: 59  HT---ASFAAEYWDRVFEHFLSEYKAGRTPNPDILCNKEVKFRAFLDYAITLGADYIATG 115

Query: 135 VCETDYSGYP 144
                     
Sbjct: 116 HYTRQCPLDD 125


>gi|41409155|ref|NP_961991.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|81571098|sp|Q73VF7|MNMA_MYCPA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|41397975|gb|AAS05605.1| hypothetical protein MAP_3057c [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 358

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 41/181 (22%), Gaps = 4/181 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL-MPKWK 68
             L   SGG DSS   +  +D    V  +                    K       +  
Sbjct: 2   RVLAAMSGGVDSSVAAARMVDAGHDVVGVHLALSTAPGTLRTGSRGCCSKEDASDARRVA 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D LG    +      +   + +             PN  V     I     +  A  LG 
Sbjct: 62  DVLGIPFYVW--DFAEKFQADVIDEFLSAYARGETPNPCVTCNQKIKFSALSAKAVALGF 119

Query: 129 TNIVIGVCETDYSGY-PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +  G       G                  L  E       P+    K +  + A   
Sbjct: 120 DAVATGHYARLSGGRLRRAVDKDKDQSYVLAVLSAEQLRHAAFPIGDTPKPQIREEAARR 179

Query: 188 G 188
           G
Sbjct: 180 G 180


>gi|319782264|ref|YP_004141740.1| GMP synthase, large subunit [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317168152|gb|ADV11690.1| GMP synthase, large subunit [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 520

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 55/185 (29%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS       +   D++  +  D+G   K E          +V +   
Sbjct: 222 KGKVICALSGGVDSSVAALLIHEAVGDQLTCILVDHGLMRKDE-------AAGVVAMFR- 273

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 E + LPL ++                +        +              A  L
Sbjct: 274 ------EHYNLPLILVNASDRFIDALEGESDPEKKRKTIGRLFIEVFEEEAKKLGGAEFL 327

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+    +      TI++      L    ++ +  PL  L K E   L ++
Sbjct: 328 AQGTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPARMNMQLVEPLRELFKDEVRALGKE 385

Query: 187 IGGQD 191
           +G  +
Sbjct: 386 LGLPE 390


>gi|317013122|gb|ADU83730.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter pylori
           Lithuania75]
          Length = 342

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 48/176 (27%), Gaps = 15/176 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS       ++   +  +         ++L          ++   K  +
Sbjct: 2   KIAVLLSGGVDSSYSAYSLKEQGHELVGIY--------LKLHASEKKHDLYIKNAQKACE 53

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG    L +        S++        ++   PN       ++    A   A +LG  
Sbjct: 54  FLGIP--LEVLDFQKDFKSAVYDEFINAYEEGKTPNPCALCNPLMKFGLALDHALKLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            I  G                    T         L  E    +  PL  L K + 
Sbjct: 112 KIATGHYARVKEIDKISYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDI 167


>gi|296108939|ref|YP_003615888.1| PP-loop domain protein [Methanocaldococcus infernus ME]
 gi|295433753|gb|ADG12924.1| PP-loop domain protein [Methanocaldococcus infernus ME]
          Length = 290

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/200 (10%), Positives = 43/200 (21%), Gaps = 6/200 (3%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKI 60
            ++ K    L+  SGG+DS             +E    + G  N  E+  E    +   I
Sbjct: 43  KMLSKDEKILVPISGGKDSHAAAYILKKLGYDIELFHINLGISNFSEISLEKVKELSNFI 102

Query: 61  VELMPKWKDSLGEDHILPLAILG--DISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
              +            +         I   +    +     ++              L F
Sbjct: 103 NAKLHIVNLKEITGKTIEDVKGKKCSICGITKRYLMNKFGYEHGFDTIVTGHNMDDELSF 162

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLK 176
                    I  +   +           +      IE          + +    +     
Sbjct: 163 MLNNLLGWNIRYLAKHLPVLPAHDKFLKKVKIFYEIEEKYIKAYADALNIPYTTVKCKYA 222

Query: 177 KYETWKLAQDIGGQDLVNLI 196
           K       ++   +      
Sbjct: 223 KKAITIRHREYLNKLEEEKP 242


>gi|218131789|ref|ZP_03460593.1| hypothetical protein BACEGG_03410 [Bacteroides eggerthii DSM
          20697]
 gi|217986092|gb|EEC52431.1| hypothetical protein BACEGG_03410 [Bacteroides eggerthii DSM
          20697]
          Length = 357

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 29/76 (38%), Gaps = 3/76 (3%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY---GQRNKVELECRLCVRKKIV 61
          +K     LL  SGG DSS      LD    V  ++F +     R +   + R    +  +
Sbjct: 8  MKSKERVLLGMSGGTDSSVAAMRLLDAGYEVTGVTFRFYEVDGRTEYLDDARALAARLGI 67

Query: 62 ELMPKWKDSLGEDHIL 77
          E +      L  + I+
Sbjct: 68 EHVTYDAQELFRERII 83


>gi|203288638|ref|YP_002223545.1| GMP synthase (glutamine-hydrolysing)(glutamine [Borrelia duttonii
           Ly]
 gi|201084345|gb|ACH93933.1| GMP synthase (glutamine-hydrolysing)(glutamine [Borrelia duttonii
           Ly]
          Length = 513

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 57/185 (30%), Gaps = 17/185 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +L  SGG DS  C         D +  +  D G   K E    L   KK    +    
Sbjct: 217 KVILGLSGGIDSLVCALLINKAIKDNLICVFVDTGFLRKNEANEILEFNKKYNLNIKHID 276

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            SL     L L  L D+      + +  K          +   +I +L      +  +  
Sbjct: 277 SSL-----LFLTNLRDVDDPEEKRKIIGKTFVEIFEKVALEEDDIKYLAQGTIYSDVIES 331

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                            C    I++      L  + ++ +  PL  L K E  +L   +G
Sbjct: 332 DV-----------KNNVCSSKNIKSHHNVGGLPDKINLNLLEPLRNLFKDEVIQLGVQLG 380

Query: 189 GQDLV 193
            ++ V
Sbjct: 381 LEEEV 385


>gi|156057843|ref|XP_001594845.1| argininosuccinate synthetase [Sclerotinia sclerotiorum 1980]
 gi|154702438|gb|EDO02177.1| argininosuccinate synthetase [Sclerotinia sclerotiorum 1980
          UF-70]
          Length = 412

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 3/59 (5%)

Query: 7  KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           A   + L +SGG D+S  L+W +++   V     D GQ  + + E       KI  + 
Sbjct: 1  MAKDKVCLAYSGGLDTSCILAWLIEKGYDVVCFMADVGQ--EEDFEAAKAKALKIGAVA 57


>gi|78065260|ref|YP_368029.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia sp. 383]
 gi|123569299|sp|Q39JI1|MNMA_BURS3 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|77966005|gb|ABB07385.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia sp. 383]
          Length = 383

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 44/192 (22%), Gaps = 11/192 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K    ++  SGG DSS       ++   V  L     + +     C         + +
Sbjct: 1   MSKR-RVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQ-----DWI 54

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                +      +            +      +      PN  V     I        A 
Sbjct: 55  DVVSVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAM 114

Query: 125 RLGITNIVIGVCETDYSGYPDC-----RHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            L    I  G                    T         L          PL  + K +
Sbjct: 115 SLDAEMIATGHYARVRERDGRFELLKAYDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTK 174

Query: 180 TWKLAQDIGGQD 191
             ++A  IG  +
Sbjct: 175 VREIAAQIGLPN 186


>gi|300710635|ref|YP_003736449.1| GMP synthase subunit B [Halalkalicoccus jeotgali B3]
 gi|299124318|gb|ADJ14657.1| GMP synthase subunit B [Halalkalicoccus jeotgali B3]
          Length = 305

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 58/187 (31%), Gaps = 28/187 (14%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A++  SGG DSS   + A +   D++  +  D G   K E E        +  L      
Sbjct: 24  AVIALSGGVDSSVAAALAYEAVGDQLTPVYVDTGLMRKGETEQVSETFSYMESL------ 77

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            + +     L +L  ++     + V                    F+      A      
Sbjct: 78  RVVDAEERFLDLLSGVTDPEAKREVIG----------------EGFIREFEREAKEADAD 121

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-VHTPLMWLKKYETWKLAQDIG 188
            +V                  I++      L        +  P+  L K E  ++A+++G
Sbjct: 122 YLVQ----GTIYPDRIESEGGIKSHHNVGGLPDVIDFEGIVEPVRDLYKDEVREVARELG 177

Query: 189 GQDLVNL 195
            ++LV  
Sbjct: 178 LEELVAE 184


>gi|269794372|ref|YP_003313827.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sanguibacter keddieii DSM 10542]
 gi|269096557|gb|ACZ20993.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sanguibacter keddieii DSM 10542]
          Length = 407

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 48/178 (26%), Gaps = 18/178 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLS---------FDYGQRNKVELE---CRLCVR 57
             L   SGG DS+   +  +D    V  +          F  G R    +E         
Sbjct: 2   KVLAAMSGGVDSAVAAARIVDAGHEVVGVHMALSRNRNQFREGSRGCCSIEDAGDARRAA 61

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
             +      W  S   +  +    L + +    T N  ++  ++      +     +   
Sbjct: 62  DVLGIPYYVWDLSEKFEDTVVADFLSEYAAG-RTPNPCVRCNEHIKFEALLDKATALGF- 119

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
                A   G    VI     D S   +       A + +  L +     +   +  L
Sbjct: 120 ----DAVATGHYAQVITSTRPDGSELRELHRSPNTAKDQSYVLAVMGPERLRRAMFPL 173


>gi|281412457|ref|YP_003346536.1| argininosuccinate synthase [Thermotoga naphthophila RKU-10]
 gi|281373560|gb|ADA67122.1| argininosuccinate synthase [Thermotoga naphthophila RKU-10]
          Length = 409

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR 45
               +L +SGG D+S  L W  ++   V     + GQ+
Sbjct: 1  MKEKVVLAYSGGLDTSVILKWLCEKGFDVIAYVANVGQK 39


>gi|170288837|ref|YP_001739075.1| argininosuccinate synthase [Thermotoga sp. RQ2]
 gi|229889901|sp|B1LAP4|ASSY_THESQ RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|170176340|gb|ACB09392.1| Argininosuccinate synthase [Thermotoga sp. RQ2]
          Length = 409

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR 45
               +L +SGG D+S  L W  ++   V     + GQ+
Sbjct: 1  MKEKVVLAYSGGLDTSVILKWLCEKGFDVIAYVANVGQK 39


>gi|148270200|ref|YP_001244660.1| argininosuccinate synthase [Thermotoga petrophila RKU-1]
 gi|166221028|sp|A5ILL1|ASSY_THEP1 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|147735744|gb|ABQ47084.1| argininosuccinate synthase [Thermotoga petrophila RKU-1]
          Length = 409

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR 45
               +L +SGG D+S  L W  ++   V     + GQ+
Sbjct: 1  MKEKVVLAYSGGLDTSVILKWLCEKGFDVIAYVANVGQK 39


>gi|119504389|ref|ZP_01626469.1| Argininosuccinate synthase [marine gamma proteobacterium HTCC2080]
 gi|119459897|gb|EAW40992.1| Argininosuccinate synthase [marine gamma proteobacterium HTCC2080]
          Length = 405

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 49/169 (28%), Gaps = 7/169 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L +SGG D+S  + W  + +   V T + D GQ  +VE          I E+    
Sbjct: 4   NKVVLAYSGGLDTSVIVRWLQETYDCEVVTFTADIGQGEEVEPARAKAQALGIEEI---- 59

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              + +     +         + T      +   ++    +  R +         A   G
Sbjct: 60  --YIDDLREEFVRDFVYPMFRANTIYEGEYLLGTSIARPLIAKRLVEIANETGADAISHG 117

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
            T         +   Y       I A     +LG    +  +     + 
Sbjct: 118 ATGKGNDQIRFELGAYALKPGIKIIAPWREWDLGSRESLMAYCEQRAIP 166


>gi|52696139|pdb|1VL2|A Chain A, Crystal Structure Of Argininosuccinate Synthase (Tm1780)
          From Thermotoga Maritima At 1.65 A Resolution
 gi|52696140|pdb|1VL2|B Chain B, Crystal Structure Of Argininosuccinate Synthase (Tm1780)
          From Thermotoga Maritima At 1.65 A Resolution
 gi|52696141|pdb|1VL2|C Chain C, Crystal Structure Of Argininosuccinate Synthase (Tm1780)
          From Thermotoga Maritima At 1.65 A Resolution
 gi|52696142|pdb|1VL2|D Chain D, Crystal Structure Of Argininosuccinate Synthase (Tm1780)
          From Thermotoga Maritima At 1.65 A Resolution
          Length = 421

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR 45
               +L +SGG D+S  L W  ++   V     + GQ+
Sbjct: 13 MKEKVVLAYSGGLDTSVILKWLCEKGFDVIAYVANVGQK 51


>gi|15644525|ref|NP_229577.1| argininosuccinate synthase [Thermotoga maritima MSB8]
 gi|24211540|sp|Q9X2A1|ASSY_THEMA RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|4982360|gb|AAD36844.1|AE001816_1 argininosuccinate synthase [Thermotoga maritima MSB8]
          Length = 409

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR 45
               +L +SGG D+S  L W  ++   V     + GQ+
Sbjct: 1  MKEKVVLAYSGGLDTSVILKWLCEKGFDVIAYVANVGQK 39


>gi|327543019|gb|EGF29466.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Rhodopirellula baltica WH47]
          Length = 399

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 13/34 (38%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
            +L  SGG DSS      L     V  +   +G
Sbjct: 3  RVVLAMSGGVDSSVAAHLLLRDGHEVIGVFMRHG 36


>gi|322801639|gb|EFZ22280.1| hypothetical protein SINV_80105 [Solenopsis invicta]
          Length = 411

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
          +       +L +SGG D+S  L W  ++  +V     + GQ+   + +       K+  +
Sbjct: 1  MSDSKRKVILAYSGGLDTSCILLWLKEKGYQVIAYVANIGQK--EDFDAIRDKALKVGAV 58

Query: 64 MPKWKD 69
               D
Sbjct: 59 KVVIDD 64


>gi|319406107|emb|CBI79737.1| GMP synthase [Bartonella sp. AR 15-3]
          Length = 518

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 55/186 (29%), Gaps = 18/186 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DSS       +   D++  +  D+G   K E        ++++ L  ++ +
Sbjct: 224 VVCGLSGGVDSSVVAILLHEAIGDQLTCVFVDHGLMRKNE-------AEEVLTLFREYYN 276

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                  + L  +        T       +        +              A  L   
Sbjct: 277 -------IKLVHVNAADMFINTLEGETDPEKKRKIIGRLFIEVFEEETKKIEGAEFLAQG 329

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   V E+  +         I++      L     + +  PL  L K +   L +++G 
Sbjct: 330 TLYPDVIESVSAIGEPIT---IKSHHNVGGLPERMKMQLIEPLRELFKDDVRSLGRELGL 386

Query: 190 QDLVNL 195
            +    
Sbjct: 387 PEQFIE 392


>gi|312869093|ref|ZP_07729267.1| argininosuccinate synthase [Lactobacillus oris PB013-T2-3]
 gi|311095339|gb|EFQ53609.1| argininosuccinate synthase [Lactobacillus oris PB013-T2-3]
          Length = 409

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 44/171 (25%), Gaps = 13/171 (7%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               +L +SGG D+S  ++W +++   V     D G     E      ++ K   +    
Sbjct: 3   KEKIVLAYSGGLDTSVAIAWLMNKGYDVIACCIDVG-----EGLDLDAIQHKAAAIGAW- 56

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    + +    D +   +   + +                 + +     +A   G
Sbjct: 57  -------KSVVIDAKRDFAEQFVLPALQVHAMYEQKYPLVSALSRPLIVQKLVGVAKEYG 109

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            T I  G                  A E  I   +          +   K 
Sbjct: 110 ATAIAHGCTGKGNDQVRFEAGIHALAPEMKIEDPIRDWHWSREEEIQYAKD 160


>gi|308183444|ref|YP_003927571.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter pylori PeCan4]
 gi|308065629|gb|ADO07521.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter pylori PeCan4]
          Length = 342

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 48/176 (27%), Gaps = 15/176 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS       ++   +  +         ++L          ++   K  +
Sbjct: 2   KIAVLLSGGVDSSYSAYSLKEQGHELVGIY--------LKLHASEKKHDLYIKNAQKACE 53

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG    L +        S++        ++   PN       ++    A   A +LG  
Sbjct: 54  FLGIP--LEVLDFQKDFKSAVYDEFISAYEEGQTPNPCALCNPLMKFGLALDHALKLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            I  G                    T         L  E    +  PL  L K + 
Sbjct: 112 KIATGHYARVKEIDKVSYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDI 167


>gi|307107358|gb|EFN55601.1| hypothetical protein CHLNCDRAFT_52216 [Chlorella variabilis]
          Length = 448

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 47/154 (30%), Gaps = 7/154 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L +SGG D+S  L W  D +   V T + D GQ  ++E   +      + E+    
Sbjct: 43  KKVVLAYSGGLDTSVILKWLQDTYDCEVVTFTADLGQGEELEPARQKAEAAGVKEI---- 98

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              + +     +         + +      +   ++    +  R I   +     A   G
Sbjct: 99  --YIDDLREEFVGDFVFPMFRANSLYEGTYLLGTSIARPLIAKRQIEIALEVGADAVSHG 156

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
            T         +   Y       + A     +L 
Sbjct: 157 ATGKGNDQVRFELGYYGLKPDIKVIAPWREWDLN 190


>gi|239607252|gb|EEQ84239.1| argininosuccinate synthase [Ajellomyces dermatitidis ER-3]
          Length = 416

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 24/65 (36%), Gaps = 2/65 (3%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          +       L +SGG D+S  L+W ++R   V     D GQ    + +        I  L 
Sbjct: 1  MPAKDRVCLAYSGGLDTSCILAWLIERGYDVVCFLADVGQ--AEDFKEAERKALSIGALK 58

Query: 65 PKWKD 69
              D
Sbjct: 59 LVVSD 63


>gi|166030634|ref|ZP_02233463.1| hypothetical protein DORFOR_00300 [Dorea formicigenerans ATCC
           27755]
 gi|166029636|gb|EDR48393.1| hypothetical protein DORFOR_00300 [Dorea formicigenerans ATCC
           27755]
          Length = 408

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 57/214 (26%), Gaps = 27/214 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L +SGG D++  + W  +     V     + GQ  ++             + + 
Sbjct: 1   MKEKVVLAYSGGLDTTAVIPWLKETFGYDVICCCINCGQGEEL-------------DGLE 47

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +     G   +    I+ D   + +   V       N                   +A +
Sbjct: 48  ERAKMAGASKLYIEDIIDDFCDNYIMPCVKAHAVYENKYLLGTAMARPAIAKKLVEIARK 107

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK--KYETWKL 183
            G   I  G                 +         +   + +  P       K E+ + 
Sbjct: 108 EGAVAICHGATGKG----------NDQIRFELGITALAPDIKIIAPWRMTDLWKMESRED 157

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
                    ++L  + SH+ Y   R+  +    G
Sbjct: 158 EIAYCKAHGIDLPFDASHS-YSRDRNLWHISHEG 190


>gi|119476176|ref|ZP_01616528.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [marine gamma proteobacterium HTCC2143]
 gi|119450803|gb|EAW32037.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [marine gamma proteobacterium HTCC2143]
          Length = 372

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 50/195 (25%), Gaps = 13/195 (6%)

Query: 1   MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           MN+I    P     ++  SGG DSS        +  +VE L       +     C    +
Sbjct: 1   MNNIAATKPSDQKVIVGMSGGVDSSVSALLLQQQGYQVEGLFMKNWDEDDGSEYC--TAK 58

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
             + +            H        +   +     +A            +  R  I   
Sbjct: 59  DDLADAQAVCDQLKITLHT--ANFAAEYWDNVFEHFLAEYKAGRTPNPDVLCNRE-IKFK 115

Query: 118 FAATLAYRLGITNI-----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
                A  LG   I     V      D +     R +          +          P+
Sbjct: 116 AFLDYALVLGADYIATGHYVRKHQMGDRAQLIKGRDNNKDQSYFLHAVSGTEIAKTLFPV 175

Query: 173 MWLKKYETWKLAQDI 187
             L+K +   +A+  
Sbjct: 176 GDLEKPDVRAIAEKY 190


>gi|332704481|ref|ZP_08424569.1| PP-loop domain protein [Desulfovibrio africanus str. Walvis Bay]
 gi|332554630|gb|EGJ51674.1| PP-loop domain protein [Desulfovibrio africanus str. Walvis Bay]
          Length = 311

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 23/66 (34%), Gaps = 7/66 (10%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-------QRNKVELECRLCV 56
           +       L+  SGG+DS   +    D+   V  L    G        R+ VE  C    
Sbjct: 43  MFGPQDKILVALSGGKDSLALMYELADQGYDVTGLHVYLGIGRSSEQARHLVESFCAKHG 102

Query: 57  RKKIVE 62
            K ++ 
Sbjct: 103 FKLMIA 108


>gi|289548105|ref|YP_003473093.1| GMP synthase, large subunit [Thermocrinis albus DSM 14484]
 gi|289181722|gb|ADC88966.1| GMP synthase, large subunit [Thermocrinis albus DSM 14484]
          Length = 508

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 60/205 (29%), Gaps = 33/205 (16%)

Query: 1   MNDIIKKA----------PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVE 49
           M DI+K+              +   SGG DS+           D +E +  D+G   K E
Sbjct: 197 MGDILKEKIEEIRSQVKGRKVISALSGGVDSTVAAVLTHRAVGDLLECVFVDHGLLRKGE 256

Query: 50  LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
           LE      +K+                L                     +    P     
Sbjct: 257 LEQVTEAFRKMNLPFRVVSAGKLFLERL---------------------RGVEDPEEKRR 295

Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETD-YSGYPDCRHDTIRAIETAINLGMESHVTV 168
                F+      A ++G   ++ G    D            I++      L  + ++ +
Sbjct: 296 IIGHTFIEVFEKEAEKIGAQLLLQGTLYPDVVESAGIAGSQVIKSHHNVGGLPEKMNLEL 355

Query: 169 HTPLMWLKKYETWKLAQDIGGQDLV 193
             PL  + K E  +L + +G  D +
Sbjct: 356 LEPLRDMFKDEVRQLGKLLGIPDEI 380


>gi|261200809|ref|XP_002626805.1| argininosuccinate synthase [Ajellomyces dermatitidis SLH14081]
 gi|239593877|gb|EEQ76458.1| argininosuccinate synthase [Ajellomyces dermatitidis SLH14081]
 gi|327357917|gb|EGE86774.1| argininosuccinate synthase [Ajellomyces dermatitidis ATCC 18188]
          Length = 416

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 24/65 (36%), Gaps = 2/65 (3%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          +       L +SGG D+S  L+W ++R   V     D GQ    + +        I  L 
Sbjct: 1  MPAKERVCLAYSGGLDTSCILAWLIERGYDVVCFLADVGQ--AEDFKEAERKALSIGALK 58

Query: 65 PKWKD 69
              D
Sbjct: 59 LVVSD 63


>gi|218133009|ref|ZP_03461813.1| hypothetical protein BACPEC_00870 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991882|gb|EEC57886.1| hypothetical protein BACPEC_00870 [Bacteroides pectinophilus ATCC
           43243]
          Length = 375

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 48/187 (25%), Gaps = 6/187 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN---KVELECRLCVRKKIVELM 64
               ++  SGG DSS       ++   V  ++    Q      +E     C    + +  
Sbjct: 14  KERVVVGMSGGVDSSVAACLLKEQGYDVIGVTMQIWQDEDSCSMEENGGCCGWSAVEDAR 73

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +      +++        +      N     +  N             L+  +    
Sbjct: 74  RVAQQLDIPYYVMNFKNEFRENVIEYFVNEYKNGRTPNPCIACNRYVKWESLLKRSMEIG 133

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW---LKKYETW 181
              I        E   +G    R+    A +    L   +   +   LM      K    
Sbjct: 134 ADYIATGHYARIEQLSNGRYVVRNSVTAAKDQTYALYNLTQEQLRHTLMPIGEYDKEHIR 193

Query: 182 KLAQDIG 188
           ++A   G
Sbjct: 194 QIAAQRG 200


>gi|148827312|ref|YP_001292065.1| tRNA-specific 2-thiouridylase MnmA [Haemophilus influenzae PittGG]
 gi|205816853|sp|A5UFX6|MNMA_HAEIG RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|148718554|gb|ABQ99681.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus influenzae PittGG]
          Length = 385

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 33/135 (24%), Gaps = 2/135 (1%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 +   SGG DSS        +  +VE L     + +  +          + +   
Sbjct: 22  NATKKVICGMSGGVDSSVSAFILQQQGYQVEGLFMKNWEEDDDDDTDYCTAAADLADAQA 81

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  + H +      +   +     +             +  + I F  F    A  
Sbjct: 82  VCDKLGIKLHKIN--FAAEYWDNVFEHFLTEYKAGRTPNPDILCNKEIKFKAFLEYAAED 139

Query: 126 LGITNIVIGVCETDY 140
           LG   I  G      
Sbjct: 140 LGADYIATGHYVRRA 154


>gi|148543962|ref|YP_001271332.1| argininosuccinate synthase [Lactobacillus reuteri DSM 20016]
 gi|184153357|ref|YP_001841698.1| argininosuccinate synthase [Lactobacillus reuteri JCM 1112]
 gi|166989392|sp|A5VJH1|ASSY_LACRD RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|229889877|sp|B2G6Y6|ASSY_LACRJ RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|148530996|gb|ABQ82995.1| argininosuccinate synthase [Lactobacillus reuteri DSM 20016]
 gi|183224701|dbj|BAG25218.1| argininosuccinate synthase [Lactobacillus reuteri JCM 1112]
          Length = 410

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 46/171 (26%), Gaps = 13/171 (7%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               +L +SGG D+S  ++W  ++   V     D G     E +    +++K        
Sbjct: 3   KEKIVLAYSGGLDTSVAIAWLKNKGYDVIACCIDVG-----EGKDLEAIKEK-------- 49

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +G    + +    D +   +   +                   + +     +A + G
Sbjct: 50  GLQVGAWKSVVIDAKRDFAEQFVLPALQAHAMYEQKYPLVSALSRPLIVQKLVAVANQYG 109

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            T I  G                  A E  I   +          +   K 
Sbjct: 110 ATAIAHGCTGKGNDQVRFEAGIHALAPEMKIEDPIRDWHWSREEEIQYAKD 160


>gi|15605784|ref|NP_213161.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Aquifex aeolicus VF5]
 gi|6225492|sp|O66601|GUAA_AQUAE RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|2982942|gb|AAC06558.1| GMP synthase [Aquifex aeolicus VF5]
          Length = 510

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 47/185 (25%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+           D++     D+G     E E      + +   +    
Sbjct: 217 KVIAALSGGVDSTVAAVLTHRAIGDKLHCFFIDHGLLRYKEREEVEKNLRSLGLPLTVVD 276

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                               S      +K  ++      + GR  I +            
Sbjct: 277 A-------------------SEEFLEKLKGVEDPEEKRKIIGRTFIEVFEREAKKIEGAE 317

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I+       L    ++ +  P   L K E  K+ + +G
Sbjct: 318 FLLQGTLYPDVVESAGIKGSAKIKTHHNVGGLPERMNLKLLEPFRELFKDEVRKIGKLLG 377

Query: 189 GQDLV 193
             + +
Sbjct: 378 VPEEI 382


>gi|32491355|ref|NP_871609.1| GMP synthase [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
 gi|31340125|sp|Q8D1V0|GUAA_WIGBR RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|25166562|dbj|BAC24752.1| guaA [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 522

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 48/188 (25%), Gaps = 17/188 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DS T          + +  +  D G     E+     + KK+     K 
Sbjct: 225 EKVILGLSGGIDSFTSAILIHKAIGNNLFCICIDNGLLRNDEILKIKNLIKKVG----KI 280

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      L  L  I+     +     +            +                
Sbjct: 281 NVIYINHKKRFLKSLNGITDPEKKRKTIGNLFFKIFQEQADILKAKWL------------ 328

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
               +              + + I++      L     + +  PL  L K E  K+A+ I
Sbjct: 329 AQGTIYPDIIESSQNNLLKKDNFIKSHHNVCPLPKGIKLKILEPLKHLFKDEVKKIAKKI 388

Query: 188 GGQDLVNL 195
           G    +  
Sbjct: 389 GIPKEIIF 396


>gi|297625877|ref|YP_003687640.1| GMP synthase [glutamine-hydrolyzing] (glutamine amidotransferase)
           (GMP synthetase) [Propionibacterium freudenreichii
           subsp. shermanii CIRM-BIA1]
 gi|296921642|emb|CBL56199.1| GMP synthase [glutamine-hydrolyzing] (Glutamine amidotransferase)
           (GMP synthetase) [Propionibacterium freudenreichii
           subsp. shermanii CIRM-BIA1]
          Length = 517

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 57/187 (30%), Gaps = 18/187 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DS+   +       D++     D+G   K E      V+   V++    
Sbjct: 218 KRVLCALSGGVDSAVAAALVQRAIGDQLTCCFIDHGLLRKGE---AEQVKHDFVQITGVD 274

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                E        L  ++  S  +     I    + +     R          +A   G
Sbjct: 275 LVVADESER----FLSALAGVSEPEAKRKIIGREFIRSFEDVARQ---------IAGDKG 321

Query: 128 ITNIVIGVCETD-YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           I  +V G    D            I++      L  +   T+  PL  L K E   +  +
Sbjct: 322 IDFLVQGTLYPDVVESGGGDGAANIKSHHNVGGLPDDLQFTLIEPLRALFKDEVRAVGAE 381

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 382 LGLPDSM 388


>gi|326792395|ref|YP_004310216.1| GMP synthase, large subunit [Clostridium lentocellum DSM 5427]
 gi|326543159|gb|ADZ85018.1| GMP synthase, large subunit [Clostridium lentocellum DSM 5427]
          Length = 513

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 53/189 (28%), Gaps = 21/189 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS            ++  +  D+G   K E +    V          
Sbjct: 215 NGKVLCALSGGVDSSVAAVMLSKAIGKQLTCVFVDHGLLRKNEGDEVEAV---------- 264

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G +    L  +   +     + +    +               F+      A ++
Sbjct: 265 ----FGPEGHYDLNFIRVNAQERFYEKLKGVEEPEAKRKII----GEEFIRVFEEEAKKI 316

Query: 127 G-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLA 184
           G +  +V G    D       +   I++      L        +  PL  L K E  K  
Sbjct: 317 GTVDFLVQGTIYPDVIESGLGKSAVIKSHHNVGGLPDYVDFKEIIEPLRLLFKDEVRKAG 376

Query: 185 QDIGGQDLV 193
            ++G  + +
Sbjct: 377 LELGIPEYL 385


>gi|145225479|ref|YP_001136157.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Mycobacterium gilvum PYR-GCK]
 gi|315445832|ref|YP_004078711.1| GMP synthase (glutamine-hydrolyzing) [Mycobacterium sp. Spyr1]
 gi|145217965|gb|ABP47369.1| GMP synthase (glutamine-hydrolyzing) [Mycobacterium gilvum PYR-GCK]
 gi|315264135|gb|ADU00877.1| GMP synthase (glutamine-hydrolyzing) [Mycobacterium sp. Spyr1]
          Length = 522

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 55/185 (29%), Gaps = 11/185 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+   +       DR+  +  D+G      L       +   + +    
Sbjct: 219 RAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHG------LLRAGERAQVQRDFVAATG 272

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +L    +     L  +S  +  +     I    +       R+ +     + +      
Sbjct: 273 ANLVTVDVAD-RFLEALSGVTNPEGKRKIIGREFIRAFEGAVRDTVERSDGSDVPVE--- 328

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +    +  PL  L K E   + +++G
Sbjct: 329 FLVQGTLYPDVVESGGGSGTANIKSHHNVGGLPDDLKFALVEPLRLLFKDEVRAVGRELG 388

Query: 189 GQDLV 193
             + +
Sbjct: 389 LPEEI 393


>gi|288555376|ref|YP_003427311.1| (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Bacillus
           pseudofirmus OF4]
 gi|288546536|gb|ADC50419.1| (5-methylaminomethyl-2-thiouridylate)-methyltran sferase [Bacillus
           pseudofirmus OF4]
          Length = 367

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/190 (11%), Positives = 46/190 (24%), Gaps = 15/190 (7%)

Query: 5   IKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKI 60
           +KK P     ++  SGG DSS       ++   V  +   ++   ++          + +
Sbjct: 1   MKKRPEDTKVVVGMSGGVDSSVTALVLKEQGYDVIGIFMKNWDDTDESGFCTATEDYEDV 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           + +  +            +           T  +             +     I      
Sbjct: 61  IRVCNQIGIPYYA-----VNFEKQYWDKVFTYFLEEYKAGRTPNPDVMC-NKEIKFKAFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A  LG   +  G          + +                 L  +       P+  +
Sbjct: 115 NHAMALGADYVATGHYARVEEVDGEFQLLRGVDSNKDQTYFLNALSQQQLSKTMFPIGHI 174

Query: 176 KKYETWKLAQ 185
            K E  + A 
Sbjct: 175 PKKEVREKAL 184


>gi|257470341|ref|ZP_05634432.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
           [Fusobacterium ulcerans ATCC 49185]
 gi|317064551|ref|ZP_07929036.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium ulcerans ATCC 49185]
 gi|313690227|gb|EFS27062.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fusobacterium ulcerans ATCC 49185]
          Length = 359

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 53/188 (28%), Gaps = 17/188 (9%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
            D   K+ +  +  SGG DSST       +   V  ++       K E      V   + 
Sbjct: 14  YDENNKSTTIAVAMSGGVDSSTVAYLLKKQGYNVFGVTMK---TCKPEDSDAKKVCDDLG 70

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                        ++L +             +          PN  +     I L     
Sbjct: 71  ----------IPYYLLDVTKEFKEKVMDYFVDE---YLKGKTPNPCMVCNKYIKLGLLID 117

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM-WLKKYET 180
            A   G   +  G       G      D  +     ++   + ++      +  L+K + 
Sbjct: 118 FARSKGADFMATGHYTQMKDGVLSMGDDAGKDQVYFLSQMKKDNLKYLKFPIGNLEKPKV 177

Query: 181 WKLAQDIG 188
            +LAQ +G
Sbjct: 178 RELAQLLG 185


>gi|297582999|ref|YP_003698779.1| GMP synthase large subunit [Bacillus selenitireducens MLS10]
 gi|297141456|gb|ADH98213.1| GMP synthase, large subunit [Bacillus selenitireducens MLS10]
          Length = 512

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 56/185 (30%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS   +       D++  +  D+G   K E        K ++E   +  
Sbjct: 219 KVLCALSGGVDSSVVAALVHKAIGDQLICMFIDHGLLRKNE-------AKSVMETFAEGF 271

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D            LG ++  S  +                   N    +F    A    +
Sbjct: 272 DMNVIKIDAQERFLGKLAGVSDPEQ------------KRKIIGNEFIYIFEEEAAKLEDV 319

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G   TD          TI++      L  +    +  PL  L K E   +  ++G
Sbjct: 320 DFLAQGTLYTDIIESGTDTAQTIKSHHNVGGLPEDMKFDLIEPLNTLFKDEVRAVGSELG 379

Query: 189 GQDLV 193
             D +
Sbjct: 380 LSDEI 384


>gi|52081436|ref|YP_080227.1| argininosuccinate synthase [Bacillus licheniformis ATCC 14580]
 gi|52786811|ref|YP_092640.1| argininosuccinate synthase [Bacillus licheniformis ATCC 14580]
 gi|319647344|ref|ZP_08001566.1| argininosuccinate synthase [Bacillus sp. BT1B_CT2]
 gi|59799163|sp|Q65G67|ASSY_BACLD RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|52004647|gb|AAU24589.1| argininosuccinate synthase [Bacillus licheniformis ATCC 14580]
 gi|52349313|gb|AAU41947.1| ArgG [Bacillus licheniformis ATCC 14580]
 gi|317390691|gb|EFV71496.1| argininosuccinate synthase [Bacillus sp. BT1B_CT2]
          Length = 403

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          + +    +L +SGG D+S  + W  ++   V     D G
Sbjct: 1  MTQKKKVVLAYSGGLDTSVAIKWLQEQGYDVVACCLDVG 39


>gi|301154862|emb|CBW14325.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus parainfluenzae T3T1]
          Length = 382

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 35/134 (26%), Gaps = 4/134 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 +   SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 21  NATKKVICGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 77

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     +             +  + I F  F    A  
Sbjct: 78  AVCDKLG-IKLHKINFAAEYWDNVFEHFLTEYKAGRTPNPDILCNKEIKFKAFLEYAAED 136

Query: 126 LGITNIVIGVCETD 139
           LG   I  G     
Sbjct: 137 LGANYIATGHYVRR 150


>gi|291458888|ref|ZP_06598278.1| argininosuccinate synthase [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291418142|gb|EFE91861.1| argininosuccinate synthase [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 417

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 46/163 (28%), Gaps = 13/163 (7%)

Query: 1   MNDIIKKAP----SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLC 55
           M  ++ K        +L +SGG D++  + W  +     V  +  D GQ  +++      
Sbjct: 1   MGKLMPKNKTQGEKVVLAYSGGLDTTAIIPWLKENFGYEVICVCVDVGQGEELDGLSERA 60

Query: 56  VRKKIVELM-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII 114
                 +L      D   E+++LP          +        +    +    +  R + 
Sbjct: 61  KLSGAAKLYIEDISDDFCENYVLP-------CIRANACYENKYLLGTAMARPAIAKRLVE 113

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA 157
                   A   G T         + +         I A    
Sbjct: 114 IARKEGAKAICHGATGKGNDQIRFELAIKALAPDLDILAPWRM 156


>gi|254168882|ref|ZP_04875722.1| GMP synthase, C-terminal domain [Aciduliprofundum boonei T469]
 gi|197622146|gb|EDY34721.1| GMP synthase, C-terminal domain [Aciduliprofundum boonei T469]
          Length = 312

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 54/190 (28%), Gaps = 22/190 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A++  SGG DS+           D +  +  D G   K E E    +  ++        
Sbjct: 22  KAIIACSGGVDSTVAAVLVHKAINDNLLAIFVDTGFMRKNEAEEIDGLFSRMGLNYKIV- 80

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                                 ++     ++    P          F+      A   G 
Sbjct: 81  --------------------DASREFIEALKGVEDPEKKRKIIGAKFIEVFEREAEEFGA 120

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G    D+        DTI++      L  + ++ +  PL  L K E  ++A+   
Sbjct: 121 EYLVQGTIAPDWIESGGGLRDTIKSHHNVGGLPEKMNLKLVEPLRELYKDEVREIARFFN 180

Query: 189 GQDLVNLILE 198
            +        
Sbjct: 181 LEIKERQPFP 190


>gi|291514930|emb|CBK64140.1| argininosuccinate synthase [Alistipes shahii WAL 8301]
          Length = 401

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 53/185 (28%), Gaps = 13/185 (7%)

Query: 5   IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           ++     +L FSGG D S      + ++   V T   + G  +K ELE       ++   
Sbjct: 1   METKKKVVLAFSGGLDTSFCVKYLSEEKGYDVYTAIANTGGFSKPELEKIEKRAMELGAT 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                          L I  +    S+   V   I  N      V    I   +     A
Sbjct: 61  AHAT-----------LDIEQEYYEKSIRYMVFGNILRNGTYPISVSSERIFQAIAIIEYA 109

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM-WLKKYETWK 182
            ++G   +  G                I A E  I              + +L+K+    
Sbjct: 110 KQIGADAVAHGSTGAGNDQVRFDLTFQILAPEIEIITPTRDMTLTREYEIDYLRKHGITA 169

Query: 183 LAQDI 187
             + +
Sbjct: 170 DYKKM 174


>gi|289803739|ref|ZP_06534368.1| tRNA-specific 2-thiouridylase MnmA [Salmonella enterica subsp.
          enterica serovar Typhi str. AG3]
          Length = 109

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 23/73 (31%), Gaps = 8/73 (10%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--------RLC 55
          + +     ++  SGG DSS        +  +VE L     + +  E  C           
Sbjct: 1  MSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA 60

Query: 56 VRKKIVELMPKWK 68
          V  K+   +    
Sbjct: 61 VCDKLGIELHTVN 73


>gi|302035864|ref|YP_003796186.1| argininosuccinate synthase [Candidatus Nitrospira defluvii]
 gi|300603928|emb|CBK40260.1| Argininosuccinate synthase [Candidatus Nitrospira defluvii]
          Length = 405

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 58/220 (26%), Gaps = 41/220 (18%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKK 59
           M+         +L +SGG D+S  L W  +     V     D GQ    +L+      + 
Sbjct: 1   MSR--SSYKKVVLAYSGGLDTSVILKWLEEVYGCEVIAFCADLGQ--GEDLKAIKKKAQS 56

Query: 60  IV---ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
           +      +   ++   +DH+ P+     I   S     ++           +  R I   
Sbjct: 57  LGVKKVYVEDLREVFVKDHVFPMLRGNAIYEGSYLLGTSIARP-------LIARRQIEIA 109

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
                 A   G                        +       + +   + +  P     
Sbjct: 110 ADEGAEAVCHGA-----------------TGKGNDQVRFELTYMALHPQIKIIAPWREWT 152

Query: 177 ---KYETWKLAQDIGGQDLVNLILEES------HTCYLGK 207
              + E  + A+  G           S      HT Y G 
Sbjct: 153 MRSRRELIEYAEKHGIPVTATKAKPYSMDMNLFHTSYEGG 192


>gi|260579165|ref|ZP_05847056.1| GMP synthase [Corynebacterium jeikeium ATCC 43734]
 gi|258602711|gb|EEW15997.1| GMP synthase [Corynebacterium jeikeium ATCC 43734]
          Length = 513

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 50/193 (25%), Gaps = 12/193 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
            + I     A+   SGG DS+   +       DR+  +  D+G     E E         
Sbjct: 203 REQIGDEGRAICALSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGEREQVEK----- 257

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                    +  +   +          + +T+  A +                  L    
Sbjct: 258 ----DFVAATGAKLVTVDEREAFLQKLAGVTEPEAKRKAIGAGFIRSFERAVAGVLAD-- 311

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
                     +   +               I++      L  +    +  PL  L K E 
Sbjct: 312 APEGSSVDFLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPDDVEFKLVEPLRLLFKDEV 371

Query: 181 WKLAQDIGGQDLV 193
             + +++G  + +
Sbjct: 372 RAVGRELGLPEEI 384


>gi|161527848|ref|YP_001581674.1| ExsB family protein [Nitrosopumilus maritimus SCM1]
 gi|160339149|gb|ABX12236.1| ExsB family protein [Nitrosopumilus maritimus SCM1]
          Length = 265

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 1/55 (1%)

Query: 8  APSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
              ++  SGG DS+     A     D    ++ DY   ++ EL+    +  +I 
Sbjct: 14 KNKVMIALSGGVDSALVAYAAYQKLGDFAIAVTADYKTLSEEELQTAKQICSEIG 68


>gi|147900590|ref|NP_001080795.1| argininosuccinate synthase [Xenopus laevis]
 gi|82209710|sp|Q7ZWM4|ASSY_XENLA RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|28422224|gb|AAH46941.1| Ass-prov protein [Xenopus laevis]
          Length = 411

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 4/60 (6%)

Query: 5  IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV---RKKI 60
          + ++   ++L +SGG D+S  L W  ++   V     + GQ    E   +  V    KK+
Sbjct: 1  MSQSKGTVVLAYSGGLDTSCILVWLKEQGFDVIAYLANIGQNEDFEEARKKAVNLGAKKV 60


>gi|291446385|ref|ZP_06585775.1| argininosuccinate synthase [Streptomyces roseosporus NRRL 15998]
 gi|291349332|gb|EFE76236.1| argininosuccinate synthase [Streptomyces roseosporus NRRL 15998]
          Length = 411

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 22/61 (36%), Gaps = 3/61 (4%)

Query: 11 ALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           + LFSGG DSS  L          V  +S D G+      +    V +++   +     
Sbjct: 30 VVTLFSGGLDSSYLLLRLRRMGMREVHAVSVDIGEDESSSYK--QQVAEELGATIHILDR 87

Query: 70 S 70
           
Sbjct: 88 R 88


>gi|283953972|ref|ZP_06371501.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
          414]
 gi|283794577|gb|EFC33317.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
          414]
          Length = 406

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 4/80 (5%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCV---RKK 59
          +  +    +L +SGG D+S  L W  D +   V T + D GQ  ++E   +  +    K+
Sbjct: 1  MENEIKKVVLAYSGGLDTSIILKWLQDEYNCEVVTFTADIGQGEELEPARKKALSLGIKE 60

Query: 60 IVELMPKWKDSLGEDHILPL 79
              +   +D   +D++ P+
Sbjct: 61 ENIFIKDLRDEFVKDYVFPM 80


>gi|253580125|ref|ZP_04857392.1| tRNA methyl transferase [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848644|gb|EES76607.1| tRNA methyl transferase [Ruminococcus sp. 5_1_39BFAA]
          Length = 360

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 52/188 (27%), Gaps = 12/188 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR--KKIVELMPKW 67
            A++  SGG DSS       +  D     +        + ++          + +     
Sbjct: 3   KAIIAMSGGVDSSVAALLTKETGDECIGATMKLFHNEDIGVKREKTCCSLDDVEDARNVC 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                  ++       +     +        +  + PN  +     +           L 
Sbjct: 63  YRMGIRYYVFN---FSERFKEDVMDRFVDAYEHGSTPNPCIDCNRYLKFDKMFQRMRELE 119

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-------TVHTPLMWLKKYET 180
              IV G            R+   +A++   +     ++        +  PL  L+K E 
Sbjct: 120 YDYIVTGHYARVEYDEEKNRYLLKKAVDDTKDQSYVLYMLTQEQLAHISLPLGGLRKTEV 179

Query: 181 WKLAQDIG 188
            ++A+  G
Sbjct: 180 REIAEKHG 187


>gi|239942912|ref|ZP_04694849.1| argininosuccinate synthase [Streptomyces roseosporus NRRL 15998]
 gi|239989372|ref|ZP_04710036.1| argininosuccinate synthase [Streptomyces roseosporus NRRL 11379]
          Length = 402

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 22/61 (36%), Gaps = 3/61 (4%)

Query: 11 ALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           + LFSGG DSS  L          V  +S D G+      +    V +++   +     
Sbjct: 21 VVTLFSGGLDSSYLLLRLRRMGMREVHAVSVDIGEDESSSYK--QQVAEELGATIHILDR 78

Query: 70 S 70
           
Sbjct: 79 R 79


>gi|225686194|ref|YP_002734166.1| GMP synthase [Brucella melitensis ATCC 23457]
 gi|256043277|ref|ZP_05446212.1| GMP synthase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256111721|ref|ZP_05452705.1| GMP synthase [Brucella melitensis bv. 3 str. Ether]
 gi|256262678|ref|ZP_05465210.1| GuaA [Brucella melitensis bv. 2 str. 63/9]
 gi|260564483|ref|ZP_05834968.1| GuaA family protein [Brucella melitensis bv. 1 str. 16M]
 gi|265989701|ref|ZP_06102258.1| GMP synthase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265993194|ref|ZP_06105751.1| GMP synthase [Brucella melitensis bv. 3 str. Ether]
 gi|254800089|sp|C0RKS9|GUAA_BRUMB RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|225642299|gb|ACO02212.1| GMP synthase, C-terminal domain-containing protein [Brucella
           melitensis ATCC 23457]
 gi|260152126|gb|EEW87219.1| GuaA family protein [Brucella melitensis bv. 1 str. 16M]
 gi|262764064|gb|EEZ10096.1| GMP synthase [Brucella melitensis bv. 3 str. Ether]
 gi|263000370|gb|EEZ13060.1| GMP synthase [Brucella melitensis bv. 1 str. Rev.1]
 gi|263092464|gb|EEZ16717.1| GuaA [Brucella melitensis bv. 2 str. 63/9]
 gi|326410537|gb|ADZ67601.1| GMP synthase [Brucella melitensis M28]
 gi|326553828|gb|ADZ88467.1| GMP synthase [Brucella melitensis M5-90]
          Length = 520

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 57/185 (30%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DSS     A +   D++  +  D+G   K E++              +
Sbjct: 222 SGKVICALSGGVDSSVAALLAHEAVGDQLTCILVDHGLMRKDEVQ--------------Q 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +   E + LPL ++                +        +              A  L
Sbjct: 268 VVEMFREHYNLPLILVDASDRFIGALEGESDPEKKRKTIGRLFIEVFEEEARKLGGADFL 327

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+    +      TI++      L     + +  PL  L K E   L ++
Sbjct: 328 VQGTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMKMQLVEPLRELFKDEVRLLGKE 385

Query: 187 IGGQD 191
           +G  D
Sbjct: 386 LGLPD 390


>gi|154151678|ref|YP_001405296.1| GMP synthase subunit B [Candidatus Methanoregula boonei 6A8]
 gi|166215312|sp|A7IA92|GUAAB_METB6 RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
          AltName: Full=GMP synthetase
 gi|154000230|gb|ABS56653.1| GMP synthase, large subunit [Methanoregula boonei 6A8]
          Length = 305

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 1/55 (1%)

Query: 8  APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
              ++  SGG DSS C S A     DR+  +  D G   K E E    V   I 
Sbjct: 21 NEKVVMALSGGVDSSVCASLAARAIGDRLIPIYIDTGLMRKGETERIKAVFGNIR 75


>gi|110802414|ref|YP_699728.1| tRNA(Ile)-lysidine synthetase [Clostridium perfringens SM101]
 gi|110682915|gb|ABG86285.1| tRNA(Ile)-lysidine synthetase [Clostridium perfringens SM101]
          Length = 469

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 34/124 (27%), Gaps = 9/124 (7%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVR 57
           N +IK     L+  SGG DS   L    +  +     V     +    + +  E  L   
Sbjct: 12  NSMIKSGDKVLVALSGGPDSVCLLHILSELKELLHIEVYAAHVN----HCLRGESALKDE 67

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
             + EL             + +  + +  + S       +              + I + 
Sbjct: 68  AYVEELCKNLNIKCFV-KRVDINKISEEQNISTEMAGREERYKFFEELKNEYSLDKIAIA 126

Query: 118 FAAT 121
             A 
Sbjct: 127 HNAN 130


>gi|45357721|ref|NP_987278.1| hypothetical protein MMP0158 [Methanococcus maripaludis S2]
 gi|45047281|emb|CAF29714.1| conserved hypothetical protein [Methanococcus maripaludis S2]
          Length = 199

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 33/79 (41%), Gaps = 5/79 (6%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG----QRNKVELECRLCVRKK 59
          +I  A  A +LFSGG+DSS       +    ++ ++ ++G     R+  E    +    K
Sbjct: 1  MIHMA-KAHVLFSGGKDSSLSAIILHNLGYDIQLVTVNFGVLDSYRHAEETAKIIGYPHK 59

Query: 60 IVELMPKWKDSLGEDHILP 78
          +  +  +  +   +  +  
Sbjct: 60 VESMDRELIEKSVDMILKD 78


>gi|17989232|ref|NP_541865.1| GMP synthase [Brucella melitensis bv. 1 str. 16M]
 gi|21759171|sp|Q8YBL2|GUAA_BRUME RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|17985091|gb|AAL54129.1| gmp synthase (glutamine-hydrolyzing) [Brucella melitensis bv. 1
           str. 16M]
          Length = 507

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 57/185 (30%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DSS     A +   D++  +  D+G   K E++              +
Sbjct: 222 SGKVICALSGGVDSSVAALLAHEAVGDQLTCILVDHGLMRKDEVQ--------------Q 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +   E + LPL ++                +        +              A  L
Sbjct: 268 VVEMFREHYNLPLILVDASDRFIGALEGESDPEKKRKTIGRLFIEVFEEEARKLGGADFL 327

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+    +      TI++      L     + +  PL  L K E   L ++
Sbjct: 328 VQGTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMKMQLVEPLRELFKDEVRLLGKE 385

Query: 187 IGGQD 191
           +G  D
Sbjct: 386 LGLPD 390


>gi|114562316|ref|YP_749829.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Shewanella frigidimarina NCIMB 400]
 gi|122300411|sp|Q085S4|GUAA_SHEFN RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|114333609|gb|ABI70991.1| GMP synthase (glutamine-hydrolyzing) [Shewanella frigidimarina
           NCIMB 400]
          Length = 525

 Score = 47.6 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 55/181 (30%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS           D++  +  D G    + L     V +   +       
Sbjct: 230 VILGLSGGVDSSVVAMLLHRAIGDKLTCVFVDNG---LLRLNEAEQVLEMFGDHFGLNIV 286

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +  ++    A+ G+    +  K +     +                      A  L   
Sbjct: 287 HVDAENRFLDAMAGEAEPEAKRKIIGRVFVEIFDEE-----------SKKCANAKWLAQG 335

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S         I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 336 TIYPDVIESAGSATGKAHV--IKSHHNVGGLPADMKMGLVEPLRELFKDEVRKIGLELGL 393

Query: 190 Q 190
            
Sbjct: 394 P 394


>gi|317010016|gb|ADU80596.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter pylori India7]
          Length = 342

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 49/176 (27%), Gaps = 15/176 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS       ++   +  +         ++L          ++ + K  +
Sbjct: 2   KIAVLLSGGVDSSYSAYSLKEQGHELVGIY--------LKLHASEKKHDLYIKNVQKACE 53

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG    L +        S++        ++   PN       ++    A   A +LG  
Sbjct: 54  FLGIP--LEVLDFQKDFKSAVYDEFISAYEEGQTPNPCALCNPLMKFGLALDHALKLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            I  G                    T         L  E    +  PL  L K + 
Sbjct: 112 KIATGHYARVKEIDKISYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDI 167


>gi|317505238|ref|ZP_07963170.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella salivae DSM 15606]
 gi|315663667|gb|EFV03402.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella salivae DSM 15606]
          Length = 366

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 46/183 (25%), Gaps = 7/183 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K     LL SGG DSS  L   +      +      G   K E +C     + +      
Sbjct: 8   KDKRIALLLSGGVDSSVVLYEMVSHGLHPDCFYIMIGPEEKEEWDCTSE--EDLEMATAL 65

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            K    +  ++      +         +             +  R I F  F   + +  
Sbjct: 66  TKRFDCQLKVID--CHKEYWSKVTRYTMDKVKMGFTPNPDVMCNRLIKFGAFDEKIGFNY 123

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKL 183
            +             G            +    L       +     P+   +K +  K+
Sbjct: 124 DLIATGHYAQTEWSDGRKWLITSPDPIKDQTDFLAQIYDWQLKKAIFPIGNFEKNDVRKI 183

Query: 184 AQD 186
           A+ 
Sbjct: 184 AER 186


>gi|302335006|ref|YP_003800213.1| GMP synthase (glutamine-hydrolyzing) [Olsenella uli DSM 7084]
 gi|301318846|gb|ADK67333.1| GMP synthase (glutamine-hydrolyzing) [Olsenella uli DSM 7084]
          Length = 529

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 50/185 (27%), Gaps = 16/185 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +L  SGG DSS   +       D++  +  ++G   K E E    V +          
Sbjct: 221 KVILALSGGVDSSVVAALVHRAIGDQLTCVFVNHGLLRKGEPEMVEEVFR---------- 270

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +      +   A    +   +   +   K +        V       +     LA     
Sbjct: 271 EQFNVPLVHVHAEERYLRLLAGVSDPEQKRRLIGGEFWKVFFEEAQKIGDVEMLA----- 325

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
              +        +     +  TI++    I         +  PL    K E   L   +G
Sbjct: 326 QGTIYPDIIESGARKTGGKASTIKSHHNLIPFPEGVRFDLIEPLDHFFKDEVRALGIALG 385

Query: 189 GQDLV 193
               +
Sbjct: 386 LPAKM 390


>gi|225848405|ref|YP_002728568.1| argininosuccinate synthase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643412|gb|ACN98462.1| argininosuccinate synthase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 399

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 1/74 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMP 65
               +L +SGG D+S  + W  DR   V T + D GQ  +  E+E +      +  ++ 
Sbjct: 1  MKKRVVLAYSGGLDTSVIVRWLTDRGFEVITYTADVGQGEELSEIEEKALKAGAVKAIID 60

Query: 66 KWKDSLGEDHILPL 79
            K+    D+ +PL
Sbjct: 61 DIKEEFARDYCMPL 74


>gi|225560336|gb|EEH08618.1| argininosuccinate synthetase [Ajellomyces capsulatus G186AR]
          Length = 416

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 24/65 (36%), Gaps = 2/65 (3%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          +       L +SGG D+S  L+W +++   V     D GQ    + +        I  L 
Sbjct: 1  MPAKQKVCLAYSGGLDTSCILAWLIEQGYDVVCFLADVGQ--AEDFKEAERKALSIGALK 58

Query: 65 PKWKD 69
              D
Sbjct: 59 LVVAD 63


>gi|260904921|ref|ZP_05913243.1| tRNA-specific 2-thiouridylase MnmA [Brevibacterium linens BL2]
          Length = 397

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 45/186 (24%), Gaps = 8/186 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DSS   + A+D    V  +      R    L         I +     + 
Sbjct: 2   KILVAMSGGVDSSVAAARAVDAGHEVVGVHLAL-SRMPGTLRTGSRGCCTIEDSRDAHRV 60

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +   D    +    +     +  +   +      PN  +     I        A  LG  
Sbjct: 61  AGMLDIPFYVWDFSERFKEDIVDDFIAEYAAGRTPNPCMRCNERIKFAALLDRALALGFD 120

Query: 130 NIVIGVCETDYSGYPDCRHDTI-------RAIETAINLGMESHVTVHTPLMWLKKYETWK 182
            I  G                        ++    +  G +             K E   
Sbjct: 121 AIATGHYAEVLRDDNGLPELHRGEDLAKDQSYVLGVLSGDQLEHCYFPIGATASKAEVRA 180

Query: 183 LAQDIG 188
            A + G
Sbjct: 181 EAAERG 186


>gi|321458097|gb|EFX69171.1| hypothetical protein DAPPUDRAFT_202999 [Daphnia pulex]
          Length = 409

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 61/200 (30%), Gaps = 10/200 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--------QRNKVELECRLC 55
           +I +    +   SGG DSS        +   V  +              ++  ++E    
Sbjct: 3   VINRIRRVVCGVSGGVDSSVAALLLKKKGYDVVGVFMKNWDGKDELGVCQSDKDVEVAQR 62

Query: 56  VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFV-PGRNII 114
             K +     +    + E        L     + LT N  +    +   + F    +  +
Sbjct: 63  TCKILNIPFFEVN-FVKEYWNHVFENLLQDYQAGLTPNPDILCNYHIKFDLFFDYAKEKL 121

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
              F AT  Y      I     ET+ +     R D         ++   S      P+  
Sbjct: 122 DADFVATGHYARSSLGINSVETETENTKLLTSRDDFKDQTFFLSHIKQSSLKKTLFPIGG 181

Query: 175 LKKYETWKLAQDIGGQDLVN 194
           L K E  KLA D G + + N
Sbjct: 182 LLKSEVRKLASDNGLEHVSN 201


>gi|319407593|emb|CBI81243.1| GMP synthase [Bartonella sp. 1-1C]
          Length = 518

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 53/182 (29%), Gaps = 18/182 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DSS       +   D++  +  D+G   K E        ++++ L      
Sbjct: 224 VICGLSGGVDSSVAAILLHEAVGDQLTCVFVDHGLMRKNE-------AEEVLTLFR---- 272

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                + + L  +                +        +              A  L   
Sbjct: 273 ---GHYNIKLIHVNAADMFINALEGETDPEKKRKIIGRLFIEVFEEETKKIGGAEFLAQG 329

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   V E+  +         I++      L  +  + +  PL  L K +   L +++G 
Sbjct: 330 TLYPDVIESVSAIGEAVT---IKSHHNVGGLPEQMKMQLVEPLRELFKDDVRSLGRELGL 386

Query: 190 QD 191
            +
Sbjct: 387 PE 388


>gi|312897894|ref|ZP_07757308.1| GMP synthase protein [Megasphaera micronuciformis F0359]
 gi|310620989|gb|EFQ04535.1| GMP synthase protein [Megasphaera micronuciformis F0359]
          Length = 521

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 48/185 (25%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +L  SGG DSS   +       +++  +  D+G   K E +      K       +  
Sbjct: 228 KVVLALSGGVDSSVAAALISRAVGNQLTCIFVDHGLMRKNEGDEVEAAFKDSGMNFIRVD 287

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            S      L      +    ++ +      ++       V       +      +     
Sbjct: 288 ASDRFLSKLAGVSDPERKRKTIGEEFIRVFEEEGRKIGAVDFLAQGTIYPDVIESGAGDA 347

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I                              +     +  PL  L K E  +L +++G
Sbjct: 348 AVIKSHHNVGGLP-------------------AVVDFKGLIEPLRNLFKDEVRELGEELG 388

Query: 189 GQDLV 193
             D +
Sbjct: 389 LPDYL 393


>gi|167760717|ref|ZP_02432844.1| hypothetical protein CLOSCI_03102 [Clostridium scindens ATCC 35704]
 gi|167661604|gb|EDS05734.1| hypothetical protein CLOSCI_03102 [Clostridium scindens ATCC 35704]
          Length = 515

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 48/190 (25%), Gaps = 22/190 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS           D++  +  D+G   K E +               
Sbjct: 216 KGKVLCALSGGVDSSVAAVLLSKAVGDQLTCVFVDHGLLRKNEGDEVEAA---------- 265

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G +    L  +   +     + +A   +               F+      A ++
Sbjct: 266 ----FGPEGAYDLNFIRVNAQQRFYEKLAGVSEPEAKRKII----GEEFIRVFEEEAKKI 317

Query: 127 GITNIV---IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           G  + +       +   SG                         +  PL  L K E  K 
Sbjct: 318 GAVDFLVQGTIYPDVVESGLGGESAVIKSHHNVGGLPDCVDFKEIIEPLRDLFKDEVRKA 377

Query: 184 AQDIGGQDLV 193
             ++G    +
Sbjct: 378 GLELGIPKHL 387


>gi|58332120|ref|NP_001011212.1| argininosuccinate synthase [Xenopus (Silurana) tropicalis]
 gi|82195682|sp|Q5M8Z6|ASSY_XENTR RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|56556265|gb|AAH87767.1| arginosuccinate synthetase [Xenopus (Silurana) tropicalis]
          Length = 412

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 24/59 (40%), Gaps = 3/59 (5%)

Query: 5  IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + ++   ++L +SGG D+S  L W  ++   V     + GQ    + E        +  
Sbjct: 1  MSQSKGMVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQN--EDFEAARKKAVNLGA 57


>gi|15642970|ref|NP_228012.1| hypothetical protein TM0197 [Thermotoga maritima MSB8]
 gi|4980693|gb|AAD35289.1|AE001704_10 conserved hypothetical protein [Thermotoga maritima MSB8]
          Length = 304

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 57/201 (28%), Gaps = 18/201 (8%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
            +  +    L+  SGG+DS +           V+ L    G+     ++    + +K  E
Sbjct: 42  KMFGRNSKILIAVSGGKDSVSLWHMLKKLGYEVDALFIRAGK--SGMVQKAQEIVEKNAE 99

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           L+        + HI+          +     ++ +     L         ++        
Sbjct: 100 LLN------TKLHIVD--------ATEYFGGLSTQEISIMLRRPVCSICGVVRRYLMNKF 145

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           AY  G   +V G    D +          +  E  +          H  L+   K     
Sbjct: 146 AYENGYDVVVTGHNLNDEASVLLGNILHWQ--EGYLERQWPLLPKTHEKLVPKAKPLVLN 203

Query: 183 LAQDIGGQDLVNLILEESHTC 203
             +DI     +N I      C
Sbjct: 204 YEEDIKLYATLNEIPHLEMAC 224


>gi|86133562|ref|ZP_01052144.1| Argininosuccinate synthase [Polaribacter sp. MED152]
 gi|85820425|gb|EAQ41572.1| Argininosuccinate synthase [Polaribacter sp. MED152]
          Length = 391

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 49/177 (27%), Gaps = 16/177 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++ +SGG D+S C       F  V  +S + G   + E++       K+     K  
Sbjct: 2   KKLVIAYSGGLDTSYCAVSLSKEF-EVHAVSVNTGGFTENEVKNIERNAYKMGVTTYKNI 60

Query: 69  DSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           D++      ++   I G++  ++                  V    II  +     A  +
Sbjct: 61  DAVATFYNKVVKYLIFGNVLKNA-------------TYPLSVSAERIIQAIEIIEYAKSI 107

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
               I  G                  A    I   +          +   K E   +
Sbjct: 108 NAEYIAHGSTGAGNDQVRFDMIFQTLAPGIKIITPIRDQKLSRQEEIDYLKAEGIDM 164


>gi|332283935|ref|YP_004415846.1| argininosuccinate synthase [Pusillimonas sp. T7-7]
 gi|330427888|gb|AEC19222.1| argininosuccinate synthase [Pusillimonas sp. T7-7]
          Length = 445

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 29/72 (40%), Gaps = 3/72 (4%)

Query: 1  MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I++  P      + FSGG D+S  L W  ++       + + GQ ++ + E      
Sbjct: 1  MTTILENVPTGQKVGIAFSGGLDTSAALLWMRNKGAIPYAYTANLGQPDETDYESIPRRA 60

Query: 58 KKIVELMPKWKD 69
          K+      +  D
Sbjct: 61 KEYGATEARLVD 72


>gi|222149440|ref|YP_002550397.1| argininosuccinate synthase [Agrobacterium vitis S4]
 gi|221736423|gb|ACM37386.1| argininosuccinate synthase [Agrobacterium vitis S4]
          Length = 409

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + ++    +L +SGG D+S  L W  +     + T + D GQ  ++E        +++  
Sbjct: 1  MAREIKKLVLAYSGGLDTSVVLKWLQETYGCEIITFTADLGQGEELEP--ARQNAQRLGI 58

Query: 63 LMPKWKD 69
             +  D
Sbjct: 59 EDIRIDD 65


>gi|217967878|ref|YP_002353384.1| protein of unknown function DUF814 [Dictyoglomus turgidum DSM
          6724]
 gi|217336977|gb|ACK42770.1| protein of unknown function DUF814 [Dictyoglomus turgidum DSM
          6724]
          Length = 327

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 27/79 (34%), Gaps = 4/79 (5%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          +KKA  A+ L SGG DS       L +   V  ++F         LE      + +   +
Sbjct: 1  MKKA-RAISLISGGLDSILATWLILQQNIDVIGITF---STPFFNLERAKRACEFLNIPL 56

Query: 65 PKWKDSLGEDHILPLAILG 83
               +     IL     G
Sbjct: 57 HIVDITEEYMDILKNPRFG 75


>gi|168035636|ref|XP_001770315.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678346|gb|EDQ64805.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 376

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 54/219 (24%), Gaps = 14/219 (6%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLC-----------VRKKIV 61
           +L SGG DSS  L                   +   E     C           V  ++ 
Sbjct: 5   VLLSGGVDSSVALRLLCAAGHSCTAYYLKIWFQEDFENFWSECPWEDDLKNAQAVCDEVG 64

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
             +        E   L ++       +  T N  +          F+           A+
Sbjct: 65  VELRVV-HFTDEYWNLVVSHSISEIQAGRTPNPDILCNTCVKFGAFLDHIKDEQFDRVAS 123

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
             Y              + +    C  +         +L  E    +  PL    K E  
Sbjct: 124 GHYARIRKIYNCDTGAEERTELLLCPDEVKDQTYFLSHLTQEQLSRLIFPLGGFTKAEVR 183

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNS 220
           +LA+ +G  +      +    C+LGK             
Sbjct: 184 QLAEVMGLYNKNRKDSQGI--CFLGKVKFSDFIAKHLGE 220


>gi|152998143|ref|YP_001342978.1| GMP synthase [Marinomonas sp. MWYL1]
 gi|226739640|sp|A6W2W4|GUAA_MARMS RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|150839067|gb|ABR73043.1| GMP synthase, large subunit [Marinomonas sp. MWYL1]
          Length = 525

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 54/183 (29%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +       D++  +  D G    + L     V K   + M   
Sbjct: 228 KKVLLALSGGVDSSVVAALLHKAIGDQLTCVFVDNG---LLRLHEGDQVMKMFADNMGVK 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  + +  L  L + +     + +      +          ++ FL           
Sbjct: 285 VIRVDAEDLF-LGKLANEADPEKKRKIIGNTFIDVFDTEATKLTDVEFLAQGTIY----- 338

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                      + +     +   I++      L  +    +  PL  L K E  KL  ++
Sbjct: 339 -------PDVIESAASKTGKAHVIKSHHNVGGLPEDMQFKLVEPLRELFKDEVRKLGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|91215963|ref|ZP_01252932.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Psychroflexus torquis ATCC 700755]
 gi|91185940|gb|EAS72314.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Psychroflexus torquis ATCC 700755]
          Length = 509

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 52/186 (27%), Gaps = 19/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DS+   +         +  +  + G   K E +  L   K +       
Sbjct: 214 DKVILGLSGGVDSTVAATLLHKAIGKNLHCIFVNNGLLRKNEFDSVLDQYKHMG-----L 268

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                +   L L  L  +S     +            +     ++  FL         + 
Sbjct: 269 NVKGVDATDLFLDALHGVSDPEQKRKKIGNSFIEVFDDEASNVKDATFLAQGTIYPDVIE 328

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                        S   +    TI++      L     + +  PL  L K E  ++  ++
Sbjct: 329 -------------SISVNGPSATIKSHHNVGGLPDFMKLKIVEPLRMLFKDEVRRVGAEM 375

Query: 188 GGQDLV 193
           G    +
Sbjct: 376 GIDSKL 381


>gi|15606199|ref|NP_213576.1| hypothetical protein aq_848 [Aquifex aeolicus VF5]
 gi|2983394|gb|AAC06979.1| putative protein [Aquifex aeolicus VF5]
          Length = 110

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 13/99 (13%)

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
             +       + D + +    +   I++ +     + TP M + K+E  K          
Sbjct: 22  CAIGSLGMYPFEDNKKEFFEKLSETISMSLGKEFYIETPFMGMHKHEVIKRYGKF----- 76

Query: 193 VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGW 231
             + LE S TC           G  C  C  C  R++  
Sbjct: 77  --IPLELSLTCINP------VNGEPCGKCIKCKEREEAL 107


>gi|56420500|ref|YP_147818.1| hypothetical protein GK1965 [Geobacillus kaustophilus HTA426]
 gi|297529858|ref|YP_003671133.1| asparagine synthase [Geobacillus sp. C56-T3]
 gi|56380342|dbj|BAD76250.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
 gi|297253110|gb|ADI26556.1| asparagine synthase [Geobacillus sp. C56-T3]
          Length = 274

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 1/80 (1%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          I+K   + L+ FSGG DS+  L+ A +   D+V  ++         E++    + ++I  
Sbjct: 15 ILKGMGNVLVAFSGGVDSTFLLAMAKEVLGDQVLAVTAVSETFPTREVQHATKLAEQIGV 74

Query: 63 LMPKWKDSLGEDHILPLAIL 82
             K + +  ++       L
Sbjct: 75 KHIKIQINELKNEDFVKNDL 94


>gi|327392817|dbj|BAK10239.1| tRNA(Ile)-lysidine synthase TilS [Pantoea ananatis AJ13355]
          Length = 435

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 8/65 (12%)

Query: 1  MND---IIKKAPSALLLFSGGQDSSTCLSWALDRF-----DRVETLSFDYGQRNKVELEC 52
          M+D   ++K+  + ++ FSGG DS+  L             R+  L   +G     +   
Sbjct: 1  MSDFDALLKENDALVVAFSGGLDSTVLLHQLRAWQQARPRSRLRALHVHHGLSPNADSWA 60

Query: 53 RLCVR 57
            C+ 
Sbjct: 61 AHCLC 65


>gi|254368479|ref|ZP_04984496.1| hypothetical protein FTAG_01322 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157121373|gb|EDO65574.1| hypothetical protein FTAG_01322 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 359

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 47/175 (26%), Gaps = 13/175 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--------RLCVRK 58
           +    ++  SGG DSS        +   V  +     + +  +  C           V  
Sbjct: 2   ENKKVIVGISGGVDSSVSALLLKQQGYDVTGVFMKNWEEDDTDEFCSAEQDIADAQAVCD 61

Query: 59  KIVELMPKWK-----DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
            I     K            +H L     G   +  +  N  +K +        + G  I
Sbjct: 62  SIGIPFKKINFTAEYWDNVFEHFLIEYKAGRTPNPDILCNKEIKFKAFLSYVHLLGGDYI 121

Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV 168
               +A       G   +V G+ +     Y        +  +T   +G      V
Sbjct: 122 ATGHYAQIRLAADGSVQLVKGLDDNKDQTYFLYTLGQEQLRQTIFPIGNIEKSKV 176


>gi|121610393|ref|YP_998200.1| argininosuccinate synthase [Verminephrobacter eiseniae EF01-2]
 gi|121555033|gb|ABM59182.1| argininosuccinate synthase [Verminephrobacter eiseniae EF01-2]
          Length = 453

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 27/72 (37%), Gaps = 3/72 (4%)

Query: 1  MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I++  P      + FSGG D+S  L W   +  +    +   GQ ++ + +      
Sbjct: 1  MATILQNLPTGQKVGIAFSGGLDTSAALLWMKRKGAKPYAYTAHLGQPDEPDYDAIPRKA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 LEYGAEKARLID 72


>gi|312136397|ref|YP_004003734.1| queuosine synthesis [Methanothermus fervidus DSM 2088]
 gi|311224116|gb|ADP76972.1| Queuosine synthesis [Methanothermus fervidus DSM 2088]
          Length = 194

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 4/73 (5%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG----QRNKVELECRLCVRKKIVELMP 65
           A +LFSGG+DSS   +        VE ++ ++G     +   E    L    K+++L  
Sbjct: 2  KACVLFSGGKDSSLMATILDRLGMDVELVTVNFGIYDSWKAAAESAKALDFEHKVLKLNK 61

Query: 66 KWKDSLGEDHILP 78
          K      E  +  
Sbjct: 62 KIIIKAVEKILED 74


>gi|309790491|ref|ZP_07685051.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Oscillochloris trichoides DG6]
 gi|308227478|gb|EFO81146.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Oscillochloris trichoides DG6]
          Length = 359

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 52/194 (26%), Gaps = 15/194 (7%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M  I+       +  SGG DSS   +   ++   V  ++      +   L   LC   ++
Sbjct: 1   MATIM-------VAMSGGVDSSLTAALLHEQGHTVVGVTMHLWDGDDDHLAESLCCSLEM 53

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                +  + LG  + +           ++             PN  +     I      
Sbjct: 54  TASARRVCNQLGIPYYVF--NYQREFRRAVVDAFVHAYSHGYTPNPCIACNREIKFRALL 111

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDC------RHDTIRAIETAINLGMESHVTVHTPLMW 174
             A +LG   +  G          +                    LG      +  PL  
Sbjct: 112 ARANQLGYDYVATGHYVRRRVTDANQYKLLRAHDHGKDQSYVLYMLGQTELARLLFPLGE 171

Query: 175 LKKYETWKLAQDIG 188
            +K E   +A   G
Sbjct: 172 YQKSEVRAMATARG 185


>gi|307133161|ref|YP_003885177.1| argininosuccinate synthetase [Dickeya dadantii 3937]
 gi|313104076|sp|P0C1A1|ASSY_DICD3 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|306530690|gb|ADN00621.1| argininosuccinate synthetase [Dickeya dadantii 3937]
          Length = 449

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 23/57 (40%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +      K+      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAKEYGAENARLID 72


>gi|304436679|ref|ZP_07396648.1| GMP synthase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304370375|gb|EFM24031.1| GMP synthase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 518

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 53/187 (28%), Gaps = 21/187 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            AL   SGG DSS            ++  +  D+G            +RK   + +    
Sbjct: 222 RALCALSGGVDSSVAAVLLSKAIGSQLTCVFVDHG-----------LLRKNEGDEVEAVF 270

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G   +  + I       +  K V    Q               F+      A  +G 
Sbjct: 271 GRGGTYDVNFVRINARDRFYARLKGVTEPEQK-------RKIIGEEFIRVFEEAAREIGA 323

Query: 129 -TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLAQD 186
              +V G    D       +   I++      L        +  PL  L K E     ++
Sbjct: 324 VDFLVQGTIYPDVIESGLGKSAVIKSHHNVGGLPDHVDFKEIVEPLRLLFKDEVRAAGRE 383

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 384 LGIPDYL 390


>gi|296104885|ref|YP_003615031.1| argininosuccinate synthase [Enterobacter cloacae subsp. cloacae
          ATCC 13047]
 gi|295059344|gb|ADF64082.1| argininosuccinate synthase [Enterobacter cloacae subsp. cloacae
          ATCC 13047]
          Length = 448

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 23/57 (40%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +      K+      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAKEYGAENARLID 72


>gi|271498657|ref|YP_003331682.1| argininosuccinate synthase [Dickeya dadantii Ech586]
 gi|270342212|gb|ACZ74977.1| argininosuccinate synthase [Dickeya dadantii Ech586]
          Length = 449

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 23/57 (40%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +      K+      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAKEYGAENARLID 72


>gi|251787719|ref|YP_003002440.1| argininosuccinate synthase [Dickeya zeae Ech1591]
 gi|247536340|gb|ACT04961.1| argininosuccinate synthase [Dickeya zeae Ech1591]
          Length = 449

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 23/57 (40%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +      K+      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAKEYGAENARLID 72


>gi|229019618|ref|ZP_04176430.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus AH1273]
 gi|228741666|gb|EEL91854.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus cereus AH1273]
          Length = 376

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 36/142 (25%), Gaps = 8/142 (5%)

Query: 3   DIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           D++ K P     ++  SGG DSS       ++   V  +             C     + 
Sbjct: 4   DMMNKLPHETRVVIGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVC--TATED 61

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
             +++          + +            +      + +    PN  V     I     
Sbjct: 62  YNDVIEVCNQIGIPYYAVN---FEKQYWDKVFTYFLDEYRAGRTPNPDVMCNKEIKFKAF 118

Query: 120 ATLAYRLGITNIVIGVCETDYS 141
              A  LG   +  G       
Sbjct: 119 LEHAIALGADYVATGHYARVAY 140


>gi|15920850|ref|NP_376519.1| hypothetical protein ST0630 [Sulfolobus tokodaii str. 7]
 gi|15621634|dbj|BAB65628.1| 318aa long hypothetical veg136 protein [Sulfolobus tokodaii str. 7]
          Length = 318

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/86 (13%), Positives = 27/86 (31%), Gaps = 9/86 (10%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWAL----DRFDRVETLSFDYG-----QRNKVELEC 52
             + + +    +  SGG+DS+T L         +   +  ++ D G     Q +    E 
Sbjct: 41  YKMFENSKKIAVAVSGGKDSTTLLHLMKKLSEKKGFEIIGINIDLGIDMGKQYSSKSTEF 100

Query: 53  RLCVRKKIVELMPKWKDSLGEDHILP 78
            L   + +       +        + 
Sbjct: 101 ALKNFEMLGVKYRIVRIKERYGFTID 126


>gi|293390099|ref|ZP_06634433.1| argininosuccinate synthase [Aggregatibacter actinomycetemcomitans
          D7S-1]
 gi|290950633|gb|EFE00752.1| argininosuccinate synthase [Aggregatibacter actinomycetemcomitans
          D7S-1]
          Length = 445

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 26/65 (40%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          + K+    + FSGG D+S  L W   +       + + GQ ++ +        K+    M
Sbjct: 9  LPKSEKVGIAFSGGLDTSAALLWMRQKGAIPCAYTANLGQPDEDDYNAIPRKAKEYGAEM 68

Query: 65 PKWKD 69
           +  D
Sbjct: 69 ARLID 73


>gi|167534664|ref|XP_001749007.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772431|gb|EDQ86082.1| predicted protein [Monosiga brevicollis MX1]
          Length = 783

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 44/150 (29%), Gaps = 6/150 (4%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             + +L +SGG D+S  L W +++   V     D GQ    + E       K+       
Sbjct: 374 KGTVVLAYSGGLDTSCILCWFIEQGYEVIAYMADIGQ--AEDFEAARAKATKLGAKKVFI 431

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +D   E     +      +  + +      +    +    +  R I   +         G
Sbjct: 432 EDLKKEF----VTEFIWPTVQANSIYEDRYLMGTAIARPCIARRQIEIAIQEGAQFVSHG 487

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETA 157
            T         + + Y       + ++   
Sbjct: 488 ATGKGNDQIRFELTFYAMQPSIQVISVWRD 517


>gi|89255515|ref|YP_512876.1| tRNA-specific 2-thiouridylase MnmA [Francisella tularensis subsp.
           holarctica LVS]
 gi|156501449|ref|YP_001427514.1| tRNA-specific 2-thiouridylase MnmA [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|290954256|ref|ZP_06558877.1| tRNA-specific 2-thiouridylase MnmA [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312320|ref|ZP_06803107.1| tRNA-specific 2-thiouridylase MnmA [Francisella tularensis subsp.
           holarctica URFT1]
 gi|122501358|sp|Q2A5X5|MNMA_FRATH RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|166234852|sp|A7N9A5|MNMA_FRATF RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205821924|sp|Q0BP64|MNMA_FRATO RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|89143346|emb|CAJ78513.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Francisella tularensis subsp. holarctica LVS]
 gi|156252052|gb|ABU60558.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Francisella tularensis subsp. holarctica FTNF002-00]
          Length = 359

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/132 (12%), Positives = 37/132 (28%), Gaps = 5/132 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +    ++  SGG DSS        +   V  +     + +  +  C     + I +    
Sbjct: 2   ENKKVIVGISGGVDSSVSALLLKQQGYDVTGVFMKNWEEDDTDEFCS--AEQDIADAQAV 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     +           ++ ++  ++ +    PN  +     I      +  + L
Sbjct: 60  CDSIGIPFKKIN---FTAEYWDNVFEHFLIEYKAGRTPNPDILCNKEIKFKAFLSYVHLL 116

Query: 127 GITNIVIGVCET 138
           G   I  G    
Sbjct: 117 GGDYIATGHYAQ 128


>gi|325090353|gb|EGC43663.1| argininosuccinate synthetase [Ajellomyces capsulatus H88]
          Length = 416

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 24/65 (36%), Gaps = 2/65 (3%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          +       L +SGG D+S  L+W +++   V     D GQ    + +        I  L 
Sbjct: 1  MPAKQKVCLAYSGGLDTSCILAWLIEQGYDVVCFLADVGQ--AEDFKEAERKALSIGALK 58

Query: 65 PKWKD 69
              D
Sbjct: 59 LVVAD 63


>gi|308178041|ref|YP_003917447.1| GMP synthase (glutamine-hydrolyzing) [Arthrobacter arilaitensis
           Re117]
 gi|307745504|emb|CBT76476.1| GMP synthase (glutamine-hydrolyzing) [Arthrobacter arilaitensis
           Re117]
          Length = 528

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 56/185 (30%), Gaps = 11/185 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+   +       D++  +  ++G   + E      V K  V      K
Sbjct: 225 KAICGLSGGVDSAVAAALVQRAIGDQLTCVFVNHGLLREGE---AEQVEKDFVASTG-AK 280

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             + ++    L  L  +  +       +  ++            I            L  
Sbjct: 281 LYIADERERFLTALDGV--TDPETKRKIIGREFIRAFEAAEAAIIAEAASEGEPVKFLVQ 338

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   + E+            I++      L  +    +  PL  L K E   + +++G
Sbjct: 339 GTLYPDIVESGGG----EGTSNIKSHHNVGGLPEDLQFELVEPLRTLFKDEVRAVGRELG 394

Query: 189 GQDLV 193
             + +
Sbjct: 395 LPEEI 399


>gi|311114462|ref|YP_003985683.1| GMP synthase (glutamine-hydrolyzing) [Gardnerella vaginalis ATCC
           14019]
 gi|310945956|gb|ADP38660.1| GMP synthase (glutamine-hydrolyzing) [Gardnerella vaginalis ATCC
           14019]
          Length = 520

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 57/184 (30%), Gaps = 11/184 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+   +       D++  +  D+G   K E+E    V+   VE       
Sbjct: 218 VICGLSGGVDSAVAAALVHKAIGDQLTCVFVDHGLLRKGEVE---QVKHDFVEATGIKLI 274

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++  +       L  +   S  +     I +  +       R +I     +    +    
Sbjct: 275 AVDAE----DDFLDALKGVSEPERKRKIIGEKFIRTFEKAQRQVIEEAGKSGAEVK---F 327

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +    +  PL  L K E   +  ++G 
Sbjct: 328 LVQGTLYPDVVESGGGDGAANIKSHHNVGGLPKDLKFKLIEPLRTLFKDEVRAIGTELGL 387

Query: 190 QDLV 193
            D +
Sbjct: 388 PDAI 391


>gi|169335539|ref|ZP_02862732.1| hypothetical protein ANASTE_01954 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258277|gb|EDS72243.1| hypothetical protein ANASTE_01954 [Anaerofustis stercorihominis DSM
           17244]
          Length = 464

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 67/205 (32%), Gaps = 32/205 (15%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRLCVR 57
           N++IK     ++  SGG DS   L        D    +     ++  R     E      
Sbjct: 19  NNLIKNKDKVMIALSGGSDSVCLLHILNTLKNDMGFSLYAFHLNHNIR-----EEAKRDE 73

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           K +++L   +   L          L      +L ++ ++ +++      +     I+   
Sbjct: 74  KFVLDLCKTYDVPL---------FLESEDMPALHEDSSLGLEEIGRKKRYELINKIMKEN 124

Query: 118 F--AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
               A  A+ L   +  + +     SG    R  +++               +  P++ L
Sbjct: 125 HIDKAATAHHLLDHSESMILNMVRGSGIRGLRGISVKNDN------------IIRPILNL 172

Query: 176 KKYETWKLAQDIGGQDLVNLILEES 200
            K E     ++   + + ++   ++
Sbjct: 173 TKEEILCYIEENELEYVTDVTNFDT 197


>gi|15645037|ref|NP_207207.1| GMP synthase [Helicobacter pylori 26695]
 gi|3122166|sp|O25165|GUAA_HELPY RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|2313515|gb|AAD07477.1| GMP synthase (guaA) [Helicobacter pylori 26695]
          Length = 508

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 52/180 (28%), Gaps = 16/180 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DS+   +       D +  +  D+G   K E E    + K +     K  
Sbjct: 211 KVLCAVSGGVDSTVVATLLHRAIKDNLIAVFVDHGLLRKNEKERVQAMFKDL-----KIP 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  +   + L+ L  +S   L + +            F        L        ++  
Sbjct: 266 LNTIDAKEVFLSKLKGVSEPELKRKII----GETFIEVFEKEAKKHHLKG------KIEF 315

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   S         I+       L       +  PL  L K E   L +++G
Sbjct: 316 LAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEVRLLGKELG 375


>gi|326403273|ref|YP_004283354.1| argininosuccinate synthase [Acidiphilium multivorum AIU301]
 gi|325050134|dbj|BAJ80472.1| argininosuccinate synthase [Acidiphilium multivorum AIU301]
          Length = 409

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 48/156 (30%), Gaps = 13/156 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVE---LM 64
              +L +SGG D+S  L W   +R   V T + D GQ  ++E        +        +
Sbjct: 7   KKVVLAYSGGLDTSVILRWLQTERGAEVVTFTADLGQGEELEP--ARRKAEMFGVKEIFV 64

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +++  +D + P+     +         ++           +  R I         A 
Sbjct: 65  EDLRETFVKDFVFPMFRANALYEGQYLLGTSIARP-------LIAQRQIEIAEAVGADAV 117

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
             G T         + + Y       + A     NL
Sbjct: 118 AHGATGKGNDQVRFELAYYALKPDVKVVAPWREWNL 153


>gi|319957802|ref|YP_004169065.1| thiamine biosynthesis protein:exsb [Nitratifractor salsuginis DSM
          16511]
 gi|319420206|gb|ADV47316.1| thiamine biosynthesis protein:ExsB [Nitratifractor salsuginis DSM
          16511]
          Length = 328

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 23/52 (44%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           A+ LFSGG DS   +    ++   V  L    G  +  ++  +L  R ++ 
Sbjct: 2  RAISLFSGGLDSMLAVKLMTEQGIDVTALYVHIGFGSTGDVSEQLKRRAELA 53


>gi|319403509|emb|CBI77088.1| Argininosuccinate synthase [Bartonella rochalimae ATCC BAA-1498]
          Length = 407

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 48/155 (30%), Gaps = 7/155 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K+    +L +SGG D+S  L W        V T + D GQ  ++EL       + +  + 
Sbjct: 5   KEIKKVVLAYSGGLDTSIILKWLQSELGAEVVTFTADLGQGEELEL--ARRKAEMLG-VK 61

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             + + L E+ +            +        +   ++    +  R +         A 
Sbjct: 62  EIYIEDLREEFVRDFVF---PMFRANAVYEGAYLLGTSIARPLISKRLVEIAQKTNADAI 118

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN 159
             G T         + S Y       I A     N
Sbjct: 119 AHGATGKGNDQVRFELSAYALNPDIKIIAPWRDWN 153


>gi|317180159|dbj|BAJ57945.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Helicobacter pylori F32]
          Length = 508

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 52/180 (28%), Gaps = 16/180 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DS+   +       D +  +  D+G   K E E    + K +     +  
Sbjct: 211 KVLCAVSGGVDSTVVATLLHRAIKDNLIAVFVDHGLLRKNEKERVQAMFKDL-----QIP 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  +   + L+ L  +S   L + +            F        L        ++  
Sbjct: 266 LNTIDAKEIFLSKLKGVSEPELKRKII----GETFIEVFEKEAKKHHLKG------KIEF 315

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   S         I+       L       +  PL  L K E   L +++G
Sbjct: 316 LAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEVRLLGKELG 375


>gi|317177792|dbj|BAJ55581.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Helicobacter pylori F16]
          Length = 508

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 52/180 (28%), Gaps = 16/180 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DS+   +       D +  +  D+G   K E E    + K +     +  
Sbjct: 211 KVLCAVSGGVDSTVVATLLHRAIKDNLIAVFVDHGLLRKNEKERVQAMFKDL-----QIP 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  +   + L+ L  +S   L + +            F        L        ++  
Sbjct: 266 LNTIDAKEIFLSKLKGVSEPELKRKII----GETFIEVFEKEAKKHHLKG------KIEF 315

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   S         I+       L       +  PL  L K E   L +++G
Sbjct: 316 LAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEVRLLGKELG 375


>gi|308062320|gb|ADO04208.1| GMP synthase [Helicobacter pylori Cuz20]
          Length = 508

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 52/182 (28%), Gaps = 20/182 (10%)

Query: 10  SALLLFSGGQDSS---TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             L   SGG DS+   T L  A+   D +  +  D+G   K E E    + K +     +
Sbjct: 211 KVLCAVSGGVDSTVVATLLYRAIK--DNLIAVFVDHGLLRKNEKEKVQAMFKDL-----Q 263

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +  +   + L+ L  +       +     +                          L
Sbjct: 264 IPLNTIDAKEIFLSKLKGV-------SEPEWKRKIIGETFIEVFEKEAKKHHLKGKIEFL 316

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E   S         I+       L       +  PL  L K E   L ++
Sbjct: 317 AQGTLYPDVIE---SVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEVRLLGKE 373

Query: 187 IG 188
           +G
Sbjct: 374 LG 375


>gi|315586935|gb|ADU41316.1| GMP synthase (glutamine-hydrolyzing) [Helicobacter pylori 35A]
          Length = 508

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 52/180 (28%), Gaps = 16/180 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DS+   +       D +  +  D+G   K E E    + K +     +  
Sbjct: 211 KVLCAVSGGVDSTVVATLLHRAIKDNLIAVFVDHGLLRKNEKERVQAMFKDL-----QIP 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  +   + L+ L  +S   L + +            F        L        ++  
Sbjct: 266 LNTIDAKEIFLSKLKGVSEPELKRKII----GETFIEVFEKEAKKHHLKG------KIEF 315

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   S         I+       L       +  PL  L K E   L +++G
Sbjct: 316 LAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEVRLLGKELG 375


>gi|289615705|emb|CBI57446.1| unnamed protein product [Sordaria macrospora]
          Length = 417

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 37/90 (41%), Gaps = 5/90 (5%)

Query: 5  IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
          + ++   + L +SGG D+ST L W +++   V     + GQ  +   +      KK+   
Sbjct: 1  MSESKGRVCLAYSGGLDTSTILCWLIEQGYTVVCFLANVGQ--EENWDEVRAKAKKLGAE 58

Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKN 93
               D   E   +   +   I  +++ ++
Sbjct: 59 EMVILDLQQEF--VDQIVFRAIQCNAIYED 86


>gi|288802136|ref|ZP_06407577.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella melaninogenica D18]
 gi|288335571|gb|EFC74005.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella melaninogenica D18]
          Length = 360

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/189 (11%), Positives = 47/189 (24%), Gaps = 7/189 (3%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN    +     +L SGG DSS  +          +      G   K + +C     + +
Sbjct: 1   MNIQELEGKRIAVLLSGGVDSSVVVYEFARLGLHPDCFYIKIGPEEKEDWDCNSE--EDL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                  +    +  ++      +         +             +  R I F  F  
Sbjct: 59  EMATLVARRFGCKLEVID--CHKEYWDKVTRYTMEKVKAGFTPNPDVMCNRLIKFGAFDE 116

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKK 177
            + +   +             G            +    L       +     P+   +K
Sbjct: 117 KMGHDYDLIATGHYAQTEWIDGRKWLTTSPDPVKDQTDFLAQIYDWQLKKAIFPIGHYEK 176

Query: 178 YETWKLAQD 186
            E  ++A+ 
Sbjct: 177 NEVREIAER 185


>gi|253683532|ref|NP_001156660.1| tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase [Bos
           taurus]
 gi|296486862|gb|DAA28975.1| tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase [Bos
           taurus]
          Length = 417

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/112 (10%), Positives = 29/112 (25%), Gaps = 7/112 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVEL 63
           ++ A   +   SGG DS+        R  +V  +   ++   ++  +       +    +
Sbjct: 1   MQVARHVVCAVSGGVDSAVAALLLRRRGYQVTGVFMKNWDSLDEHGVCTADRDCEDAYRV 60

Query: 64  MPKWKD------SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
                          E      +   +      T N  +    +     F  
Sbjct: 61  CRILDIPFRQVSYAKEYWNDVFSDFLNEYEKGRTPNPDIVCNKHIKFRCFFN 112


>gi|225872762|ref|YP_002754219.1| GMP synthase [Acidobacterium capsulatum ATCC 51196]
 gi|225792783|gb|ACO32873.1| GMP synthase [Acidobacterium capsulatum ATCC 51196]
          Length = 516

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 53/181 (29%), Gaps = 14/181 (7%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A+   SGG DSS           D++  +  D G     E E           +    + 
Sbjct: 218 AICALSGGVDSSVAAVLVHRAIGDQLTCVFVDNGVLRLNEFEK----------VQQNLRG 267

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG + +   A    +   +   +   K +        V       +         L   
Sbjct: 268 KLGLNLVAVDASKRFLDKLAGVTDPEAKRKIIGNEFIAVFDDEAHRIAQQTGGVDWLVQG 327

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   V E+     P      I++      L  +  + +  PL  L K E  ++  D+G 
Sbjct: 328 TLYPDVIESSSVKGPSQT---IKSHHNVGGLPEDMKLKLIEPLRDLFKDEVRRIGADLGM 384

Query: 190 Q 190
            
Sbjct: 385 P 385


>gi|189466604|ref|ZP_03015389.1| hypothetical protein BACINT_02979 [Bacteroides intestinalis DSM
           17393]
 gi|189434868|gb|EDV03853.1| hypothetical protein BACINT_02979 [Bacteroides intestinalis DSM
           17393]
          Length = 353

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 46/181 (25%), Gaps = 7/181 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +L SGG DSS  +    ++  R        G      ++C     +         +    
Sbjct: 5   VLLSGGVDSSVVVHLLCEQGYRPSLFYIKIGMDGAEFMDCS--AEEDWEMASAVARRYGL 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
              ++ L    +         +    +        +  R I F  F   +      T   
Sbjct: 63  PLEMIDLQ--NEYWEQVAAYAIDKIRRGLTPNPDVMCNRFIKFGCFEQKVGKEFDFTATG 120

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLAQDIGG 189
                    G            +    L    ++ V     PL  L K E   +A+  G 
Sbjct: 121 HYATTVSKDGKIWLGTAVDPVKDQTDFLAQIDYLQVSKLMFPLGGLMKQEVRDIARTAGL 180

Query: 190 Q 190
            
Sbjct: 181 P 181


>gi|209549819|ref|YP_002281736.1| argininosuccinate synthase [Rhizobium leguminosarum bv. trifolii
          WSM2304]
 gi|209535575|gb|ACI55510.1| Argininosuccinate synthase [Rhizobium leguminosarum bv. trifolii
          WSM2304]
          Length = 404

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 2/78 (2%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + ++    +L +SGG D+S  L W  +     V T + D GQ  ++E          + +
Sbjct: 1  MARQIDKIVLAYSGGLDTSIILKWLQETYGCEVVTFTADLGQGEELEPARAKAAMLGVKD 60

Query: 63 LMPK-WKDSLGEDHILPL 79
          +     ++    D + P+
Sbjct: 61 IRIVDLREEFVRDFVFPM 78


>gi|157165469|ref|YP_001467209.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter concisus 13826]
 gi|205811585|sp|A7ZEK1|MNMA_CAMC1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|112799930|gb|EAT97274.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter concisus 13826]
          Length = 340

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 54/177 (30%), Gaps = 11/177 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DS+    +  +    V+       Q+     E    V KK+ E +     
Sbjct: 2   KIMVAMSGGVDSTMTAKFLQEAGHEVQGCYMMLHQKPGYHEENIRKV-KKVGEYL----- 55

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              + HIL    L D  +  +        ++   PN        I L      A   G  
Sbjct: 56  -GIKVHILD---LQDKFNEYVYDPFVRLYKEGKTPNPCALCNKFIKLGALLDFAKVNGCE 111

Query: 130 NIVIGVCETDYSGY-PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            +  G       G+    +  +         +  E    V  PL    K +  +LA+
Sbjct: 112 KLATGHYVQVVDGFITCAKDPSKDQSYFLAQVPKEVLKDVIFPLGDKFKKDIKELAR 168


>gi|291613422|ref|YP_003523579.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sideroxydans lithotrophicus ES-1]
 gi|291583534|gb|ADE11192.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Sideroxydans lithotrophicus ES-1]
          Length = 361

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/136 (13%), Positives = 37/136 (27%), Gaps = 7/136 (5%)

Query: 5   IKKAPS--ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           ++       ++  SGG DSS       ++   V  L     + +     C     + +++
Sbjct: 1   MQSNRKITVVVGMSGGVDSSVTALLLKEQGYEVIGLFMKNWEDDDDSEYCSSR--QDLID 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
            +            +            +      + +    PN  +   + I        
Sbjct: 59  AVSVADTIGIP---IEAVNFAKEYKDRVFNYFLREYEAGRTPNPDILCNSEIKFKAFLDH 115

Query: 123 AYRLGITNIVIGVCET 138
           A RLG   I  G    
Sbjct: 116 AIRLGAEKIATGHYAK 131


>gi|238923030|ref|YP_002936543.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Eubacterium rectale ATCC 33656]
 gi|259647682|sp|C4ZCQ4|GUAA_EUBR3 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|238874702|gb|ACR74409.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Eubacterium rectale ATCC 33656]
          Length = 524

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 48/185 (25%), Gaps = 16/185 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +        ++  +  D+G            +RK   + +    
Sbjct: 217 KVLLALSGGVDSSVLAALLAKAIGKQLTCVFVDHG-----------LLRKNEGDEVEGVF 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G   I  + +     + S    V    +           R              L  
Sbjct: 266 GKDGSFDINFVRVNAQERYYSKLAGVTEP-ERKRKIIGEEFIRVFEEEAKKIGKVDFLAQ 324

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I   V E   SG                         +  PL  L K E  K+  ++G
Sbjct: 325 GTIYPDVVE---SGLGGESAVIKSHHNVGGLPEHVDFKDIVEPLRNLFKDEVRKVGLELG 381

Query: 189 GQDLV 193
             D +
Sbjct: 382 LPDYL 386


>gi|148269863|ref|YP_001244323.1| PP-loop domain-containing protein [Thermotoga petrophila RKU-1]
 gi|147735407|gb|ABQ46747.1| PP-loop domain protein [Thermotoga petrophila RKU-1]
          Length = 304

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 57/201 (28%), Gaps = 18/201 (8%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
            +  +    L+  SGG+DS +           V+ L    G+     ++    + +K  E
Sbjct: 42  KMFGRNSKILIAVSGGKDSVSLWHMLKKLGYEVDALFIRAGK--SGMVQKAQEIVEKNAE 99

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           L+        + HI+          +     ++ +     L         ++        
Sbjct: 100 LLN------TKLHIVD--------ATEYFGGLSTQEISIMLRRPVCSICGVVRRYLMNKF 145

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           AY  G   +V G    D +          +  E  +          H  L+   K     
Sbjct: 146 AYENGYDVVVTGHNLNDEASVLLGNILHWQ--EGYLERQWPLLPKTHEKLVPKAKPLVLN 203

Query: 183 LAQDIGGQDLVNLILEESHTC 203
             +DI     +N I      C
Sbjct: 204 YEEDIKLYATLNEIPHLEMAC 224


>gi|72162451|ref|YP_290108.1| argininosuccinate synthase [Thermobifida fusca YX]
 gi|119361339|sp|Q47N84|ASSY_THEFY RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|71916183|gb|AAZ56085.1| argininosuccinate synthase [Thermobifida fusca YX]
          Length = 399

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 28/88 (31%), Gaps = 3/88 (3%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLC--VRKKIVEL 63
               +L +SGG D S      A +    V  ++ D GQ  +     R        +  +
Sbjct: 1  MTERVVLAYSGGLDTSVAIGWIAEETGAEVIAVAIDCGQGGEDMEVIRQRALACGAVEAV 60

Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLT 91
          +   K+    D+ +P      +      
Sbjct: 61 IADAKEEFANDYCVPAIQANALYMDRYP 88


>gi|255535022|ref|YP_003095393.1| Argininosuccinate synthase [Flavobacteriaceae bacterium 3519-10]
 gi|255341218|gb|ACU07331.1| Argininosuccinate synthase [Flavobacteriaceae bacterium 3519-10]
          Length = 396

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 47/170 (27%), Gaps = 12/170 (7%)

Query: 9   PSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L +SGG D S   +  +  +   V  +  + G  ++ E++       ++       
Sbjct: 2   EKVVLAYSGGLDTSFCAVYLSKVKQLEVHAVMVNLGGFSEEEIKKTEERAYQLG------ 55

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +   H++      +   + +   +   +  NN     V    +      A  A  +G
Sbjct: 56  ---VKSFHVID--DAQNYYDNCIKYLIFGNVLKNNTYPLSVSSERVFQATAIAHYAKEIG 110

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
              I  G                I   E  I   +          +   K
Sbjct: 111 AKAIAHGSTGAGNDQVRFDSIFQILLPEGEIITPIRDLKLSRNEEIEFLK 160


>gi|242399762|ref|YP_002995187.1| ATP-binding protein [Thermococcus sibiricus MM 739]
 gi|242266156|gb|ACS90838.1| ATP-binding protein [Thermococcus sibiricus MM 739]
          Length = 229

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 3/38 (7%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRV-ETLSF 40
          +IK      +LFSGG+DS+  L WAL +   V   +S 
Sbjct: 1  MIKM--RVAVLFSGGKDSTYALYWALKKGFEVKYLVSM 36


>gi|126178393|ref|YP_001046358.1| hypothetical protein Memar_0443 [Methanoculleus marisnigri JR1]
 gi|125861187|gb|ABN56376.1| hypothetical protein Memar_0443 [Methanoculleus marisnigri JR1]
          Length = 80

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 18/44 (40%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL 50
           +   LLL+SGG  S+ CL   L     V  L  D GQ      
Sbjct: 32 MSTRCLLLYSGGIASTACLHHLLSAGFAVTPLYVDPGQSELKNE 75


>gi|320538125|ref|ZP_08038020.1| GMP synthase protein [Treponema phagedenis F0421]
 gi|320144942|gb|EFW36663.1| GMP synthase protein [Treponema phagedenis F0421]
          Length = 529

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 52/189 (27%), Gaps = 24/189 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   LL  SGG DSS   +       + +  +  D+G   K E +              +
Sbjct: 234 SGKVLLALSGGVDSSVLAALLNKAVGENLTCIFIDHGLMRKNEGDEVEAAFANSEMNFIR 293

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                          LG +   S  +     I +               +      A ++
Sbjct: 294 INAQS--------RFLGKLKGVSEPEKKRKIIGEEF-------------IRVFEEEAKKI 332

Query: 127 GI-TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-VHTPLMWLKKYETWKLA 184
           GI   +  G    D           I++      L        +  P   L K E  +L 
Sbjct: 333 GIVDFLAQGTIYADVVESGANGSAVIKSHHNVGGLPKNISFKSLIEPFRTLFKDEIRRLG 392

Query: 185 QDIGGQDLV 193
            ++G  D +
Sbjct: 393 LELGLPDYL 401


>gi|295105625|emb|CBL03169.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain or B
           subunit/GMP synthase (glutamine-hydrolyzing), N-terminal
           domain or A subunit [Faecalibacterium prausnitzii SL3/3]
          Length = 516

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 44/185 (23%), Gaps = 14/185 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS   +        ++  +  D+G   K E E          E+   + 
Sbjct: 217 KVLCALSGGVDSSVLAAMLAKAIGKQLTCVFVDHGLLRKNEKE----------EVCSVFG 266

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   +    +              + +           R              L  
Sbjct: 267 PGNANGFDINFICVDARDRYFSKLKGITEPERKRKIIGEEFIRVFEEEAKKIGKVDFLAQ 326

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I   V E   SG                         +  PL  L K E  +  +++G
Sbjct: 327 GTIYPDVVE---SGLGGESTVIKSHHNVGGLPDTVDFKELVEPLRNLFKDEVRQAGRELG 383

Query: 189 GQDLV 193
             + +
Sbjct: 384 LPEYL 388


>gi|288924750|ref|ZP_06418687.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella buccae D17]
 gi|288338537|gb|EFC76886.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella buccae D17]
          Length = 353

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/183 (12%), Positives = 43/183 (23%), Gaps = 7/183 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K     +L SGG DSS  +          +      G   + E +C     + +      
Sbjct: 2   KDKRIAVLLSGGVDSSVVVCELAALGLHPDCFYIKIGPEEQEEWDCSSE--EDLEMATAV 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                    ++      +         +             +  R I F  F A + +  
Sbjct: 60  AARYGCRLQVVD--CHREYWDEVTRYTMEKVKAGFTPNPDVMCNRLIKFGAFDAKMGHDY 117

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKL 183
            +             G            +    L       +     P+    K E  ++
Sbjct: 118 DLIATGHYAQTEWIDGRKWLVTSPDPVKDQTDFLAQIYDWQLRKAIFPIGHYMKDEVREI 177

Query: 184 AQD 186
           A+ 
Sbjct: 178 AER 180


>gi|262341081|ref|YP_003283936.1| bifunctional argininosuccinate synthase/acetyltransferase activity
           of N-acetylglutamate synthase [Blattabacterium sp.
           (Blattella germanica) str. Bge]
 gi|262272418|gb|ACY40326.1| bifunctional argininosuccinate synthase/acetyltransferase activity
           of N-acetylglutamate synthase [Blattabacterium sp.
           (Blattella germanica) str. Bge]
          Length = 588

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 61/210 (29%), Gaps = 17/210 (8%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           N+ +      +L +SGG D+S CL + +     V T+  + G  NK ELE        I 
Sbjct: 185 NNYLSPGDKIVLAYSGGLDTSYCLKYLIQEKYEVHTVIINTGGFNKDELEEIEDRAISIG 244

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
               K  +++ E              + +   +   I  NN     V    I   +  A 
Sbjct: 245 SKSHKTIEAIEE-----------YYQNCIKYLIFGNILKNNTYPLSVSSERIFQAIKIAQ 293

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            A  +    I  G                I   E      +          +   K +  
Sbjct: 294 YATFIKAKAIAHGSTGAGNDQIRFDIAFQIICPEKITLSPIRDMKVSREEEIEYLKNQGI 353

Query: 182 KLAQDIGGQDLVNLIL------EESHTCYL 205
            +  +     +   I       +E+ T Y 
Sbjct: 354 SICWNQAKYSINKGIWGTSIGGKETLTSYH 383


>gi|237722379|ref|ZP_04552860.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides sp. 2_2_4]
 gi|299146396|ref|ZP_07039464.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides sp. 3_1_23]
 gi|229448189|gb|EEO53980.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides sp. 2_2_4]
 gi|298516887|gb|EFI40768.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides sp. 3_1_23]
          Length = 355

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 48/181 (26%), Gaps = 7/181 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
            L SGG DSS  +    ++  +        G      ++C     + I       +    
Sbjct: 5   ALLSGGVDSSVVVHLLCEQGYKPTLFYIKIGMDGAEYMDCS--AEEDIELSTATARKYGL 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
              ++ L    +   +     +    Q        +  + I F  F   +      T   
Sbjct: 63  SLEVVDLH--QEYWENVAAYAIDKIRQGLTPNPDVMCNKLIKFGCFEQRVGKDFDFTATG 120

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLAQDIGG 189
                   +G            +    L    ++ V     P+  L K E  ++A   G 
Sbjct: 121 HYATTLQRNGKTWLGTAKDPVKDQTDFLAQIDYLQVSKLMFPIGGLMKQEVREIANKAGL 180

Query: 190 Q 190
            
Sbjct: 181 P 181


>gi|255088800|ref|XP_002506322.1| predicted protein [Micromonas sp. RCC299]
 gi|226521594|gb|ACO67580.1| predicted protein [Micromonas sp. RCC299]
          Length = 459

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 48/155 (30%), Gaps = 9/155 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELM-PK 66
              +L +SGG D+S  L W  D     V T + D GQ  ++E       +  + ++    
Sbjct: 59  KKVVLAYSGGLDTSIILKWLQDTYGCEVITFTADLGQGEELEPARAKAEQMGVKQIYIDD 118

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            ++    D++ P+     I   +     ++           +  R I         A   
Sbjct: 119 LREEFVRDYVFPMFRANAIYEGTYLLGTSIARP-------LISKRQIEIAKEVGADAVCH 171

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
           G T         +   Y       + A     +L 
Sbjct: 172 GATGKGNDQVRFELGYYGLKPDIKVIAPWREWDLN 206


>gi|313157960|gb|EFR57366.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Alistipes sp. HGB5]
          Length = 519

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 56/187 (29%), Gaps = 19/187 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G   K E E  L   K +   +   
Sbjct: 224 DKVVLGLSGGVDSSVAAVLLHKAIGKNLYCIFVDSGLLRKNEFEDVLESYKNMGLNVKGV 283

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           K          L  L  +      + +  +          V  +++ +L         + 
Sbjct: 284 KAGAK-----FLGDLAGVCDPETKRKIIGRDFVEVFNEEAVQIKDVRWLAQGTIYPDVIE 338

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                        S   +    TI++      L  + ++ +  PL  L K E  ++ + +
Sbjct: 339 -------------SVSVNGPSATIKSHHNVGGLPEKMNLRIVEPLRLLFKDEVRRVGRSL 385

Query: 188 GGQDLVN 194
           G  + + 
Sbjct: 386 GISEQLI 392


>gi|308476116|ref|XP_003100275.1| CRE-ASNS-2 protein [Caenorhabditis remanei]
 gi|308265799|gb|EFP09752.1| CRE-ASNS-2 protein [Caenorhabditis remanei]
          Length = 571

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 42/174 (24%), Gaps = 10/174 (5%)

Query: 13  LLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           +L SGG DSS   S A      R   V   SF  G  +            K +       
Sbjct: 234 VLLSGGLDSSLVSSIASREMKRRGMTVH--SFSIGVDHNSPDVIAARKVAKFIGTTHHEF 291

Query: 69  DSLGEDH----ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
               + +    I  L  L     S    ++        L          + L        
Sbjct: 292 YFSIQFYFQEGIKNLRKLIWHLESYDVTSIRASTPMYFLSEEIRKMGIKVVLSGEGADEI 351

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             G         + D+      R   +   +           +V   + +L K 
Sbjct: 352 FGGYLYFHNAPSDEDFQKETIDRVLHLYTSDCLRADKSSMAHSVEVRVPFLDKA 405


>gi|308063827|gb|ADO05714.1| GMP synthase [Helicobacter pylori Sat464]
          Length = 508

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 52/180 (28%), Gaps = 16/180 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DS+   +       D +  +  D+G   K E E    + K +     +  
Sbjct: 211 KVLCAVSGGVDSTVVATLLHRAIKDNLIAVFVDHGLLRKNEKEKVQAMFKDL-----QIP 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  +   + L+ L  +S   L + +            F        L        ++  
Sbjct: 266 LNTIDAKEIFLSKLKGVSEPELKRKII----GETFIEVFEKEAKKHHLKG------KIEF 315

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   S         I+       L       +  PL  L K E   L +++G
Sbjct: 316 LAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEVRLLGKELG 375


>gi|308184782|ref|YP_003928915.1| GMP synthase [Helicobacter pylori SJM180]
 gi|308060702|gb|ADO02598.1| GMP synthase [Helicobacter pylori SJM180]
          Length = 508

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 52/180 (28%), Gaps = 16/180 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DS+   +       D +  +  D+G   K E E    + K +     +  
Sbjct: 211 KVLCAVSGGVDSTVVATLLHRAIKDNLIAVFVDHGLLRKNEKEKVQAMFKDL-----QIP 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  +   + L+ L  +S   L + +            F        L        ++  
Sbjct: 266 LNTIDAKEIFLSKLKGVSEPELKRKII----GETFIEVFEKEAKKHHLKG------KIEF 315

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   S         I+       L       +  PL  L K E   L +++G
Sbjct: 316 LAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEVRLLGKELG 375


>gi|297380221|gb|ADI35108.1| GMP synthase, C-terminal domain-containing protein [Helicobacter
           pylori v225d]
          Length = 508

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 52/180 (28%), Gaps = 16/180 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DS+   +       D +  +  D+G   K E E    + K +     +  
Sbjct: 211 KVLCAVSGGVDSTVVATLLHRAIKDNLIAVFVDHGLLRKNEKEKVQAMFKDL-----QIP 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  +   + L+ L  +S   L + +            F        L        ++  
Sbjct: 266 LNTIDAKEIFLSKLKGVSEPELKRKII----GETFIEVFEKEAKKHHLKG------KIEF 315

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   S         I+       L       +  PL  L K E   L +++G
Sbjct: 316 LAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEVRLLGKELG 375


>gi|297243651|ref|ZP_06927582.1| GMP synthase [Gardnerella vaginalis AMD]
 gi|296888402|gb|EFH27143.1| GMP synthase [Gardnerella vaginalis AMD]
          Length = 520

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 57/184 (30%), Gaps = 11/184 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+   +       +++  +  D+G   K E+E    V+   VE       
Sbjct: 218 VICGLSGGVDSAVAAALVHKAIGNQLTCVFVDHGLLRKGEVE---QVKHDFVEATGIKLI 274

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++  +       L  +   S  +     I +  +       R +I     +    +    
Sbjct: 275 AVDAE----DDFLNALKGVSEPERKRKIIGEKFIRTFEKAQRQVIEEAGKSGAEVK---F 327

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +    +  PL  L K E   +  ++G 
Sbjct: 328 LVQGTLYPDVVESGGGDGAANIKSHHNVGGLPKDLKFKLIEPLRTLFKDEVRAIGTELGL 387

Query: 190 QDLV 193
            D +
Sbjct: 388 PDEI 391


>gi|251778793|ref|ZP_04821713.1| GMP synthase [Clostridium botulinum E1 str. 'BoNT E Beluga']
 gi|243083108|gb|EES48998.1| GMP synthase [Clostridium botulinum E1 str. 'BoNT E Beluga']
          Length = 513

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 54/189 (28%), Gaps = 21/189 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS            ++  +  D+G   K E +    +          
Sbjct: 215 NGKVLCALSGGVDSSVAAVLLSRAVGKQLTCVFVDHGLLRKNEGDEVEEI---------- 264

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G +    L  +   +     + +A   +               F+      A ++
Sbjct: 265 ----FGPNGQYDLNFIRVNAQERFYEKLAGIEEPEQKRKII----GEEFIRVFEEEAKKI 316

Query: 127 G-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLA 184
           G +  +V G    D       +   I++      L        +  PL  L K E  K  
Sbjct: 317 GTVDYLVQGTIYPDVIESGLGKSAVIKSHHNVGGLPDYVDFKEIIEPLRLLFKDEVRKAG 376

Query: 185 QDIGGQDLV 193
            ++G  + +
Sbjct: 377 LELGIPEKL 385


>gi|188589233|ref|YP_001919810.1| GMP synthase [Clostridium botulinum E3 str. Alaska E43]
 gi|259647751|sp|B2UZ05|GUAA_CLOBA RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|188499514|gb|ACD52650.1| GMP synthase [Clostridium botulinum E3 str. Alaska E43]
          Length = 513

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 54/189 (28%), Gaps = 21/189 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS            ++  +  D+G   K E +    +          
Sbjct: 215 NGKVLCALSGGVDSSVAAVLLSRAVGKQLTCVFVDHGLLRKNEGDEVEEI---------- 264

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G +    L  +   +     + +A   +               F+      A ++
Sbjct: 265 ----FGPNGQYDLNFIRVNAQERFYEKLAGIEEPEQKRKII----GEEFIRVFEEEAKKI 316

Query: 127 G-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLA 184
           G +  +V G    D       +   I++      L        +  PL  L K E  K  
Sbjct: 317 GTVDYLVQGTIYPDVIESGLGKSAVIKSHHNVGGLPDYVDFKEIIEPLRLLFKDEVRKAG 376

Query: 185 QDIGGQDLV 193
            ++G  + +
Sbjct: 377 LELGIPEKL 385


>gi|187932912|ref|YP_001884624.1| GMP synthase [Clostridium botulinum B str. Eklund 17B]
 gi|259647750|sp|B2TIX3|GUAA_CLOBB RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|187721065|gb|ACD22286.1| GMP synthase [Clostridium botulinum B str. Eklund 17B]
          Length = 513

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 54/189 (28%), Gaps = 21/189 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS            ++  +  D+G   K E +    +          
Sbjct: 215 NGKVLCALSGGVDSSVAAVLLSRAVGKQLTCVFVDHGLLRKNEGDEVEEI---------- 264

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G +    L  +   +     + +A   +               F+      A ++
Sbjct: 265 ----FGPNGQYDLNFIRVNAQERFYEKLAGIEEPEQKRKII----GEEFIRVFEEEAKKI 316

Query: 127 G-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLA 184
           G +  +V G    D       +   I++      L        +  PL  L K E  K  
Sbjct: 317 GTVDYLVQGTIYPDVIESGLGKSAVIKSHHNVGGLPDYVDFKEIIEPLRLLFKDEVRKAG 376

Query: 185 QDIGGQDLV 193
            ++G  + +
Sbjct: 377 LELGIPEKL 385


>gi|18311454|ref|NP_563388.1| tRNA(Ile)-lysidine synthetase [Clostridium perfringens str. 13]
 gi|61216685|sp|Q8XHL1|TILS_CLOPE RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|18146138|dbj|BAB82178.1| probable cell-cycle protein [Clostridium perfringens str. 13]
          Length = 469

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 33/124 (26%), Gaps = 9/124 (7%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALD----RFDRVETLSFDYGQRNKVELECRLCVR 57
           N +IK     L+  SGG DS   L    +        V     +    + +  E  L   
Sbjct: 12  NSMIKSGDKVLVALSGGPDSVCLLHILSELRELLHIEVYAAHVN----HCLRGESALKDE 67

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
             + EL             + +  + +  + S       +              + I + 
Sbjct: 68  AYVEELCKNLNIKCFV-KRVDINKISEEQNISTEMAGREERYKFFEELKNEYSLDKIAIA 126

Query: 118 FAAT 121
             A 
Sbjct: 127 HNAN 130


>gi|325527989|gb|EGD05219.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia sp. TJI49]
          Length = 387

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 44/192 (22%), Gaps = 11/192 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K    ++  SGG DSS       ++   V  L     + +     C         + +
Sbjct: 1   MSKR-RVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQ-----DWI 54

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                +      +            +      +      PN  V     I        A 
Sbjct: 55  DVVSVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAM 114

Query: 125 RLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            L    I  G                    T         L          PL  + K +
Sbjct: 115 SLDAEMIATGHYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTK 174

Query: 180 TWKLAQDIGGQD 191
             ++A  IG  +
Sbjct: 175 VREIAAQIGLPN 186


>gi|319936217|ref|ZP_08010637.1| GMP synthase [Coprobacillus sp. 29_1]
 gi|319808791|gb|EFW05324.1| GMP synthase [Coprobacillus sp. 29_1]
          Length = 514

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 50/188 (26%), Gaps = 18/188 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS           +++  +  D+G   K E +    +          
Sbjct: 215 NGKVLCALSGGVDSSVAAVLLSKAIGNQLTCVFVDHGLLRKNEGDEVEAI---------- 264

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G +    L  +   +     + +     ++      + G   I +          
Sbjct: 265 ----FGPNGNYDLNFIRVNAQQRYYEKLKGI--EDPETKRKIIGEEFIRVFEEEAQKIGT 318

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLAQ 185
               +   +               I++      L        +  PL  L K E  K+  
Sbjct: 319 VDFLVQGTIYPDVVESGLGGESAVIKSHHNVGGLPDCVDFKEIIEPLRDLFKDEVRKVGL 378

Query: 186 DIGGQDLV 193
           ++G  + +
Sbjct: 379 ELGIPEYL 386


>gi|258546108|ref|ZP_05706342.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Cardiobacterium hominis ATCC 15826]
 gi|258518660|gb|EEV87519.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Cardiobacterium hominis ATCC 15826]
          Length = 369

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 51/184 (27%), Gaps = 10/184 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +  SGG DSS       D    V  +     +       C     + + +     + 
Sbjct: 11  KIAVGISGGVDSSVAALLLRDAGYDVFGIFMKNWEETYSSGYCS--AEEDVEDARDVCET 68

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                H +         H  + ++   +      PN  +     I     A  A  LG  
Sbjct: 69  LGIPLHTVN---FVAEYHERVFRHFLAEYGAGRTPNPDILCNREIKFAEMAHYAAELGAD 125

Query: 130 NIV--IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLA 184
            +          + G P        + + +  L   +   +     PL  + K +  ++A
Sbjct: 126 YLATGHYARRGTHHGAPALYKGVDGSKDQSYFLSQITPAQLDKALFPLGGMAKSDVRRIA 185

Query: 185 QDIG 188
           +  G
Sbjct: 186 EQAG 189


>gi|57167686|ref|ZP_00366826.1| argininosuccinate synthase [Campylobacter coli RM2228]
 gi|305433193|ref|ZP_07402349.1| argininosuccinate synthase [Campylobacter coli JV20]
 gi|57020808|gb|EAL57472.1| argininosuccinate synthase [Campylobacter coli RM2228]
 gi|304443894|gb|EFM36551.1| argininosuccinate synthase [Campylobacter coli JV20]
          Length = 406

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 4/80 (5%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCV---RKK 59
          +  +    +L +SGG D+S  L W  D +   V T + D GQ  ++E   +  +    K+
Sbjct: 1  MKNEVKKVVLAYSGGLDTSIILKWLQDEYKCEVVTFTADIGQGEELEPARKKALSLGIKE 60

Query: 60 IVELMPKWKDSLGEDHILPL 79
              +   ++   +D++ P+
Sbjct: 61 ENVFIKDLREEFVKDYVFPM 80


>gi|257792909|gb|ACV67286.1| WbpS [Escherichia coli]
          Length = 614

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 17/50 (34%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
            SGG DS+T ++        V T S     +   E      + K I    
Sbjct: 269 LSGGIDSTTIVAMLKKSGRDVSTFSIGMPNKQFDESHHAEQIAKYIGTQH 318


>gi|261403487|ref|YP_003247711.1| GMP synthase, large subunit [Methanocaldococcus vulcanius M7]
 gi|261370480|gb|ACX73229.1| GMP synthase, large subunit [Methanocaldococcus vulcanius M7]
          Length = 310

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 57/184 (30%), Gaps = 26/184 (14%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A++  SGG DSS           D++  +  D G   K E E      K+ +E+     D
Sbjct: 24  AIIALSGGVDSSVAAVLTHKAIGDKLTAVFVDTGLMRKGEKEEVEKTFKEKLEMNLIIVD 83

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +        L  L  +      + +                   +F+     +A ++   
Sbjct: 84  AKDRF----LNALKGVKDPEEKRKIIG----------------KLFIDVFEEIAEKIKAE 123

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V G                       + L     + V  PL  L K E   LA+++G 
Sbjct: 124 VLVQGTIA-----PDWIETRGNIKSHHNVALPHGMVLEVVEPLRELYKDEVRILARELGL 178

Query: 190 QDLV 193
            D +
Sbjct: 179 PDSI 182


>gi|154686891|ref|YP_001422052.1| tRNA-specific 2-thiouridylase MnmA [Bacillus amyloliquefaciens
           FZB42]
 gi|166234844|sp|A7Z745|MNMA_BACA2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|154352742|gb|ABS74821.1| TrmU [Bacillus amyloliquefaciens FZB42]
          Length = 371

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 50/190 (26%), Gaps = 12/190 (6%)

Query: 4   IIKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           + K+      ++  SGG DSS       ++   V  +             C     +   
Sbjct: 1   MEKRPEDTRVVVGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGFC--TATEDYE 58

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +++          + +            + +    + +    PN  V     I       
Sbjct: 59  DVIRVCNQIGIPYYAVN---FEKQYWEKVFQYFLDEYKAGRTPNPDVMCNKEIKFKAFLD 115

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRH-----DTIRAIETAINLGMESHVTVHTPLMWLK 176
            A  LG   +  G            R      +          L  E    V  P+  L+
Sbjct: 116 HALSLGADYLATGHYARVDRSAGTVRMLRGLDENKDQTYFLNQLNQEQLSKVMFPIGDLQ 175

Query: 177 KYETWKLAQD 186
           K    ++A++
Sbjct: 176 KSRVREIAKE 185


>gi|78044681|ref|YP_359926.1| hypothetical protein CHY_1080 [Carboxydothermus hydrogenoformans
          Z-2901]
 gi|77996796|gb|ABB15695.1| conserved hypothetical protein [Carboxydothermus hydrogenoformans
          Z-2901]
          Length = 332

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 22/55 (40%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
              AL LFSGG DS   +  +      V  L F     ++V+ E      K++ 
Sbjct: 1  MNNRALALFSGGLDSILAIKVSQRAGADVTALHFINPFVSEVKTEYIKEKAKELG 55


>gi|283956079|ref|ZP_06373566.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
          1336]
 gi|283792399|gb|EFC31181.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
          1336]
          Length = 406

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 4/80 (5%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCV---RKK 59
          +  +    +L +SGG D+S  L W  D +   V T + D GQ  ++E   +  +    K+
Sbjct: 1  MKNEVKKVVLAYSGGLDTSIILKWLQDEYNCEVVTFTADIGQGEELEPARKKALSLGIKE 60

Query: 60 IVELMPKWKDSLGEDHILPL 79
              +   +D   +D++ P+
Sbjct: 61 ENIFIKDLRDEFVKDYVFPM 80


>gi|254776291|ref|ZP_05217807.1| tRNA-specific 2-thiouridylase MnmA [Mycobacterium avium subsp.
           avium ATCC 25291]
          Length = 358

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 41/181 (22%), Gaps = 4/181 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL-MPKWK 68
             L   SGG DSS   +  +D    V  +                    K       +  
Sbjct: 2   RVLAAMSGGVDSSVAAARMVDAGHDVVGVHLALSTAPGTLRTGSRGCCSKEDASDARRVA 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D LG    +      +   + +             PN  V     I     +  A  LG 
Sbjct: 62  DVLGIPFYVW--DFAEKFQADVIDAFVSAYARGETPNPCVTCNQKIKFSALSAKAVALGF 119

Query: 129 TNIVIGVCETDYSGY-PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +  G       G                  L  E       P+    K +  + A   
Sbjct: 120 DAVATGHYARLSGGRLRRAVDKDKDQSYVLAVLSAEQLRHAAFPIGDTPKPQIREEAARR 179

Query: 188 G 188
           G
Sbjct: 180 G 180


>gi|226365671|ref|YP_002783454.1| GMP synthase [Rhodococcus opacus B4]
 gi|226244161|dbj|BAH54509.1| GMP synthetase [Rhodococcus opacus B4]
          Length = 523

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 51/185 (27%), Gaps = 11/185 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+   +       D +  +  D+G      L       +   + +    
Sbjct: 220 KAICGLSGGVDSAVAAALVQRAIGDNLTCVFVDHG------LMRAGERAQVEQDFVAATG 273

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             L     +  A       + ++     +            G     L   A     +  
Sbjct: 274 ARLI---TVDAADTFIGELAGVSDPETKRKIIGREFIRSFEGAVSDVLGENAAHGDTVE- 329

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +   T+  PL  L K E   + +++G
Sbjct: 330 FLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPEDLQFTLVEPLRLLFKDEVRAVGRELG 389

Query: 189 GQDLV 193
             + +
Sbjct: 390 LPEEI 394


>gi|205355515|ref|ZP_03222286.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
          CG8421]
 gi|205346749|gb|EDZ33381.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
          CG8421]
          Length = 406

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 4/80 (5%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCV---RKK 59
          +  +    +L +SGG D+S  L W  D +   V T + D GQ  ++E   +  +    K+
Sbjct: 1  MKNEVKKVVLAYSGGLDTSIILKWLQDEYNCEVVTFTADIGQGEELEPARKKALSLGIKE 60

Query: 60 IVELMPKWKDSLGEDHILPL 79
              +   +D   +D++ P+
Sbjct: 61 ENIFIKDLRDEFVKDYVFPM 80


>gi|157414941|ref|YP_001482197.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
          81116]
 gi|172047098|sp|A8FL83|ASSY_CAMJ8 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|157385905|gb|ABV52220.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
          81116]
 gi|307747580|gb|ADN90850.1| Argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
          M1]
 gi|315931862|gb|EFV10817.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
          327]
          Length = 406

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 4/80 (5%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCV---RKK 59
          +  +    +L +SGG D+S  L W  D +   V T + D GQ  ++E   +  +    K+
Sbjct: 1  MKNEVKKVVLAYSGGLDTSIILKWLQDEYNCEVVTFTADIGQGEELEPARKKALSLGIKE 60

Query: 60 IVELMPKWKDSLGEDHILPL 79
              +   +D   +D++ P+
Sbjct: 61 ENIFIKDLRDEFVKDYVFPM 80


>gi|148926641|ref|ZP_01810322.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
          CG8486]
 gi|145845160|gb|EDK22255.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
          CG8486]
          Length = 406

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 4/80 (5%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCV---RKK 59
          +  +    +L +SGG D+S  L W  D +   V T + D GQ  ++E   +  +    K+
Sbjct: 1  MKNEVKKVVLAYSGGLDTSIILKWLQDEYNCEVVTFTADIGQGEELEPARKKALSLGIKE 60

Query: 60 IVELMPKWKDSLGEDHILPL 79
              +   +D   +D++ P+
Sbjct: 61 ENIFIKDLRDEFVKDYVFPM 80


>gi|170732018|ref|YP_001763965.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia cenocepacia MC0-3]
 gi|205811368|sp|B1JVW3|MNMA_BURCC RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|169815260|gb|ACA89843.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia cenocepacia MC0-3]
          Length = 391

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 44/192 (22%), Gaps = 11/192 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K    ++  SGG DSS       ++   V  L     + +     C         + +
Sbjct: 1   MSKR-RVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQ-----DWI 54

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                +      +            +      +      PN  V     I        A 
Sbjct: 55  DVVSVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAM 114

Query: 125 RLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            L    I  G                    T         L          PL  + K +
Sbjct: 115 SLDAEMIATGHYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTK 174

Query: 180 TWKLAQDIGGQD 191
             ++A  IG  +
Sbjct: 175 VREIAAQIGLPN 186


>gi|50365158|ref|YP_053583.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Mesoplasma florum L1]
 gi|81391861|sp|Q6F1C4|GUAA_MESFL RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|50363714|gb|AAT75699.1| GMP synthase (glutamine hydrolyzing) [Mesoplasma florum L1]
          Length = 513

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 54/189 (28%), Gaps = 19/189 (10%)

Query: 8   APSALLL-FSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               ++L  SGG DSS   +        ++  +  D G   K E         K  E   
Sbjct: 215 KDKQVILGLSGGVDSSVAAAIIGKAIGKQLTCIFVDTGLLRKNETIE----VMKAYETNF 270

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                L E   L  + L  I      + +  K   +   +     ++  FL         
Sbjct: 271 DINIKLVEASDLFFSELKGIKEPEAKRKIIGKCFIDVFTDAARQHKDADFLAQGTIYPDV 330

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +              S        TI++      L  +    +  PL  L K E  ++  
Sbjct: 331 IE-------------SSSHGASSKTIKSHHNVGGLPEDLKFRLIEPLRNLFKDEVRQVGF 377

Query: 186 DIGGQDLVN 194
            +G  + + 
Sbjct: 378 KLGLPEEMI 386


>gi|57236975|ref|YP_178776.1| argininosuccinate synthase [Campylobacter jejuni RM1221]
 gi|61211373|sp|Q5HVA9|ASSY_CAMJR RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|57165779|gb|AAW34558.1| argininosuccinate synthase [Campylobacter jejuni RM1221]
 gi|315058080|gb|ADT72409.1| Argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
          S3]
          Length = 406

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 4/80 (5%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCV---RKK 59
          +  +    +L +SGG D+S  L W  D +   V T + D GQ  ++E   +  +    K+
Sbjct: 1  MKNEVKKVVLAYSGGLDTSIILKWLQDEYNCEVVTFTADIGQGEELEPARKKALSLGIKE 60

Query: 60 IVELMPKWKDSLGEDHILPL 79
              +   +D   +D++ P+
Sbjct: 61 ENIFIKDLRDEFVKDYVFPM 80


>gi|88597140|ref|ZP_01100376.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
          84-25]
 gi|88190829|gb|EAQ94802.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
          84-25]
          Length = 406

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 4/80 (5%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCV---RKK 59
          +  +    +L +SGG D+S  L W  D +   V T + D GQ  ++E   +  +    K+
Sbjct: 1  MKNEVKKVVLAYSGGLDTSIILKWLQDEYNCEVVTFTADIGQGEELEPARKKALSLGIKE 60

Query: 60 IVELMPKWKDSLGEDHILPL 79
              +   +D   +D++ P+
Sbjct: 61 ENIFIKDLRDEFVKDYVFPM 80


>gi|86151608|ref|ZP_01069822.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
          260.94]
 gi|86153213|ref|ZP_01071417.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
          HB93-13]
 gi|121613552|ref|YP_001000365.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
          81-176]
 gi|167005311|ref|ZP_02271069.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
          81-176]
 gi|315124174|ref|YP_004066178.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
          ICDCCJ07001]
 gi|166219959|sp|A1VZ24|ASSY_CAMJJ RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|85841237|gb|EAQ58485.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
          260.94]
 gi|85842939|gb|EAQ60150.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
          HB93-13]
 gi|87249480|gb|EAQ72440.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
          81-176]
 gi|284925923|gb|ADC28275.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
          IA3902]
 gi|315017896|gb|ADT65989.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
          ICDCCJ07001]
          Length = 406

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 4/80 (5%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCV---RKK 59
          +  +    +L +SGG D+S  L W  D +   V T + D GQ  ++E   +  +    K+
Sbjct: 1  MKNEVKKVVLAYSGGLDTSIILKWLQDEYNCEVVTFTADIGQGEELEPARKKALSLGIKE 60

Query: 60 IVELMPKWKDSLGEDHILPL 79
              +   +D   +D++ P+
Sbjct: 61 ENIFIKDLRDEFVKDYVFPM 80


>gi|56808669|ref|ZP_00366393.1| COG0482: Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase, contains the PP-loop ATPase domain
           [Streptococcus pyogenes M49 591]
          Length = 299

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 50/192 (26%), Gaps = 12/192 (6%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +   +    ++  SGG DSS       ++   V  +             C     +   +
Sbjct: 6   MTDNSKIRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDYKD 63

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +           + +            + +    + +    PN  V     I        
Sbjct: 64  VAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDY 120

Query: 123 AYRLGITNIVIGVCET----DYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLK 176
           A  LG   +  G        +       R       +T     L  E       PL  L+
Sbjct: 121 AMTLGADYVATGHYAQVKRDENGTVHMLRGADNGKDQTYFLSQLSQEQLQKTLFPLGHLQ 180

Query: 177 KYETWKLAQDIG 188
           K E  ++A+  G
Sbjct: 181 KSEVREIAERAG 192


>gi|238853983|ref|ZP_04644340.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus gasseri 202-4]
 gi|238833428|gb|EEQ25708.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus gasseri 202-4]
          Length = 375

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 47/185 (25%), Gaps = 11/185 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS        +   V  +             C     +   ++     +
Sbjct: 8   RVVVGMSGGVDSSVSALLLKQQGFDVVGVFMKNWDDTDDSGVC--TATEDYEDVKKVADE 65

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                + +            + +    + +    PN  V     I        A  L   
Sbjct: 66  IGIPYYSIN---FEKDYWERVFEYFLNEYKKGRTPNPDVMCNKEIKFKSFLDFAMDLDAD 122

Query: 130 NIVIGVCE----TDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYETWKL 183
            I +G        +       R       +T     L  +    V  PL  L K +  ++
Sbjct: 123 YIAMGHYAATKVDENGIVHMMRPKDGNKDQTYFLSQLSQDQLKKVIFPLANLTKPQVREI 182

Query: 184 AQDIG 188
           A   G
Sbjct: 183 AIYAG 187


>gi|111023165|ref|YP_706137.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Rhodococcus jostii RHA1]
 gi|110822695|gb|ABG97979.1| GMP synthase (glutamine-hydrolyzing)/ GMP synthase [Rhodococcus
           jostii RHA1]
          Length = 523

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 51/185 (27%), Gaps = 11/185 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+   +       D +  +  D+G      L       +   + +    
Sbjct: 220 KAICGLSGGVDSAVAAALVQRAIGDNLTCVFVDHG------LMRAGERAQVEQDFVAATG 273

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             L     +  A       + ++     +            G     L   A     +  
Sbjct: 274 AKLI---TVDAADTFIGELAGVSDPETKRKIIGREFIRSFEGAVSDVLGENAAHGDTVE- 329

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +   T+  PL  L K E   + +++G
Sbjct: 330 FLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPEDLQFTLVEPLRLLFKDEVRAVGRELG 389

Query: 189 GQDLV 193
             + +
Sbjct: 390 LPEEI 394


>gi|329889248|ref|ZP_08267591.1| GMP synthase glutamine-hydrolyzing [Brevundimonas diminuta ATCC
           11568]
 gi|328844549|gb|EGF94113.1| GMP synthase glutamine-hydrolyzing [Brevundimonas diminuta ATCC
           11568]
          Length = 520

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 58/183 (31%), Gaps = 17/183 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS       +   D++  +  D G   K E        K++ EL  +  
Sbjct: 224 KVICGLSGGVDSSVAAVLIHEAIGDQLTCVFVDTGLLRKDE-------AKQVTELFREHY 276

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +            LG++   +   +   K +        V  R  + +  AA LA     
Sbjct: 277 NIPLVHVDASKEFLGEL---AGISDPETKRKTIGRVFIEVFDREAVKIEGAAFLAQGT-- 331

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
               +     +           I++      L     + +  PL  L K E   L +++G
Sbjct: 332 ----LYPDVIESVSPTGGPSHVIKSHHNVGGLPDFMKLKLVEPLRELFKDEVRALGRELG 387

Query: 189 GQD 191
             D
Sbjct: 388 LTD 390


>gi|325854955|ref|ZP_08171671.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella denticola CRIS 18C-A]
 gi|325483933|gb|EGC86873.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella denticola CRIS 18C-A]
          Length = 360

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/183 (11%), Positives = 44/183 (24%), Gaps = 7/183 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                 +L SGG DSS  +          +      G   K E +C     + +      
Sbjct: 7   MNRRIAVLLSGGVDSSVVVYEFARLGLHPDCFYIRIGPEEKEEWDCNSE--EDMEMATAV 64

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +       ++      +  +      +             +  R I F  F   + +  
Sbjct: 65  ARRFGCRLQVVD--CHKEYWNQVTRYTMEKVKAGFTPNPDVMCNRLIKFGAFDEKMGHDY 122

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH---TPLMWLKKYETWKL 183
            +             G            +    L       +     P+   +K E  ++
Sbjct: 123 DLIATGHYAQTEWIDGRKWLTTSPDPVKDQTDFLAQIYDWQLKKALFPIGHYEKDEVRRI 182

Query: 184 AQD 186
           A+ 
Sbjct: 183 AER 185


>gi|294340794|emb|CAZ89189.1| Argininosuccinate synthase (Citrulline--aspartate ligase)
          [Thiomonas sp. 3As]
          Length = 446

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 27/72 (37%), Gaps = 3/72 (4%)

Query: 1  MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I++  P      + FSGG D+S  L W   +  +    + + GQ ++ + +      
Sbjct: 1  MATILQNLPTGQKVGIAFSGGLDTSAALLWMKKKGAQPYAYTANLGQPDESDYDDIPRKA 60

Query: 58 KKIVELMPKWKD 69
                  +  D
Sbjct: 61 MGFGAEKARLID 72


>gi|262201680|ref|YP_003272888.1| GMP synthase large subunit [Gordonia bronchialis DSM 43247]
 gi|262085027|gb|ACY20995.1| GMP synthase, large subunit [Gordonia bronchialis DSM 43247]
          Length = 535

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/183 (13%), Positives = 54/183 (29%), Gaps = 11/183 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+   +       DR+  +  D+G     E E          ++   + 
Sbjct: 232 RAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGERE----------QVQHDFV 281

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            + G   +   A    +   +   +   K +             +  ++     A     
Sbjct: 282 GATGAKLVTVDAAETFLGELAGVSDPETKRKIIGREFIRSFEGAVADVLGDGAEAGEKVE 341

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +   ++  PL  L K E   + +++G
Sbjct: 342 FLVQGTLYPDVVESGGGSGTANIKSHHNVGGLPEDLEFSLVEPLRLLFKDEVRAVGRELG 401

Query: 189 GQD 191
             +
Sbjct: 402 LPE 404


>gi|206561667|ref|YP_002232432.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia cenocepacia J2315]
 gi|229486335|sp|B4EE50|MNMA_BURCJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|198037709|emb|CAR53652.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia cenocepacia J2315]
          Length = 391

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 44/192 (22%), Gaps = 11/192 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K    ++  SGG DSS       ++   V  L     + +     C         + +
Sbjct: 1   MSKR-RVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQ-----DWI 54

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                +      +            +      +      PN  V     I        A 
Sbjct: 55  DVVSVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAM 114

Query: 125 RLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            L    I  G                    T         L          PL  + K +
Sbjct: 115 SLDAEMIATGHYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTK 174

Query: 180 TWKLAQDIGGQD 191
             ++A  IG  +
Sbjct: 175 VREIAAQIGLPN 186


>gi|150400611|ref|YP_001324377.1| GMP synthase subunit B [Methanococcus aeolicus Nankai-3]
 gi|150013314|gb|ABR55765.1| GMP synthase, large subunit [Methanococcus aeolicus Nankai-3]
          Length = 310

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 54/186 (29%), Gaps = 26/186 (13%)

Query: 9   PSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              ++  SGG DS+      A    D++  +  D G   K E        ++I ++  + 
Sbjct: 22  KKTIIALSGGVDSAVAAVLTARAIGDQLLAVFVDTGLMRKNE-------AQEIYKIFKED 74

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                         L ++      +                     IF+     +A   G
Sbjct: 75  MGLNLRIIEAKEQFLKELDGVDDPEEK-------------RKIIGRIFIEIFEEVAKENG 121

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G              +        I L     + +  PL  L K E   LA+D+
Sbjct: 122 EEVLVQGTIA-----PDWIESEGEIKTHHNIALPSGMVLELVEPLRDLYKDEVRLLAKDL 176

Query: 188 GGQDLV 193
           G  D +
Sbjct: 177 GLPDEI 182


>gi|254246300|ref|ZP_04939621.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia cenocepacia PC184]
 gi|124871076|gb|EAY62792.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia cenocepacia PC184]
          Length = 447

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 44/192 (22%), Gaps = 11/192 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K    ++  SGG DSS       ++   V  L     + +     C         + +
Sbjct: 57  MSKR-RVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQ-----DWI 110

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                +      +            +      +      PN  V     I        A 
Sbjct: 111 DVVSVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAM 170

Query: 125 RLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            L    I  G                    T         L          PL  + K +
Sbjct: 171 SLDAEMIATGHYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTK 230

Query: 180 TWKLAQDIGGQD 191
             ++A  IG  +
Sbjct: 231 VREIAAQIGLPN 242


>gi|107021774|ref|YP_620101.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia cenocepacia AU
           1054]
 gi|116688721|ref|YP_834344.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia cenocepacia HI2424]
 gi|123072405|sp|Q1BZ27|MNMA_BURCA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205811383|sp|A0K4M4|MNMA_BURCH RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|105891963|gb|ABF75128.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia cenocepacia AU 1054]
 gi|116646810|gb|ABK07451.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia cenocepacia HI2424]
          Length = 391

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 44/192 (22%), Gaps = 11/192 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K    ++  SGG DSS       ++   V  L     + +     C         + +
Sbjct: 1   MSKR-RVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQ-----DWI 54

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                +      +            +      +      PN  V     I        A 
Sbjct: 55  DVVSVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAM 114

Query: 125 RLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            L    I  G                    T         L          PL  + K +
Sbjct: 115 SLDAEMIATGHYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTK 174

Query: 180 TWKLAQDIGGQD 191
             ++A  IG  +
Sbjct: 175 VREIAAQIGLPN 186


>gi|86149847|ref|ZP_01068076.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
          CF93-6]
 gi|218562310|ref|YP_002344089.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
          NCTC 11168]
 gi|30172970|sp|Q9PHK7|ASSY_CAMJE RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|85839665|gb|EAQ56925.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
          CF93-6]
 gi|112360016|emb|CAL34806.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
          NCTC 11168]
 gi|315926782|gb|EFV06156.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
          DFVF1099]
 gi|315929329|gb|EFV08537.1| argininosuccinate synthase [Campylobacter jejuni subsp. jejuni
          305]
          Length = 406

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 4/80 (5%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCV---RKK 59
          +  +    +L +SGG D+S  L W  D +   V T + D GQ  ++E   +  +    K+
Sbjct: 1  MKNEVKKVVLAYSGGLDTSIILKWLQDEYNCEVVTFTADIGQGEELEPARKKALSLGIKE 60

Query: 60 IVELMPKWKDSLGEDHILPL 79
              +   +D   +D++ P+
Sbjct: 61 ENIFIKDLRDEFVKDYVFPM 80


>gi|303232364|ref|ZP_07319057.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Atopobium vaginae PB189-T1-4]
 gi|302481548|gb|EFL44615.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Atopobium vaginae PB189-T1-4]
          Length = 392

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/146 (15%), Positives = 38/146 (26%), Gaps = 9/146 (6%)

Query: 1   MNDIIKK--APSALLLF--SGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
           MN  +       A +    SGG DS+   +   +    V  +      R+     C    
Sbjct: 1   MNISMPTYAPKGATVYLGMSGGVDSACSAALLKEWGYTVHAVYMRNWSRDLPGFTC--RW 58

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
              + +              L +        S++   +         PN  V     I  
Sbjct: 59  ADDLADAERVCVTLG---LTLDVWDCEQEYKSTVVDYLIDAYARGYTPNPDVMCNQTIKF 115

Query: 117 VFAATLAYRLGITNIVIGVCETDYSG 142
              A  A+  G   I  G      +G
Sbjct: 116 GTFAEKAFAHGADFIATGHYAQVDAG 141


>gi|224074941|ref|XP_002304500.1| predicted protein [Populus trichocarpa]
 gi|222841932|gb|EEE79479.1| predicted protein [Populus trichocarpa]
          Length = 534

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 56/191 (29%), Gaps = 9/191 (4%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
           ND +      +   SGG DS+   +       DR+  +  D G     E   R  V +  
Sbjct: 221 NDAVGPEEHVICALSGGVDSTVAATLVHKAIGDRLHCIFVDNGLLRYKE---RERVAETF 277

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
              +      L    +             +   +  KI      + F    + +      
Sbjct: 278 ESDLH-----LPVTCVDASNEFLSKLKGVVDPEMKRKIIGKEFISIFDAFAHELEQKLGK 332

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
             AY +  T     +      G       TI++      L  +  + +  PL  L K E 
Sbjct: 333 KPAYLVQGTLYPDVIESCPPPGSGRTHSHTIKSHHNVGGLPKDMKLKLIEPLKLLFKDEV 392

Query: 181 WKLAQDIGGQD 191
            +L + +   D
Sbjct: 393 RQLGRILNVPD 403


>gi|208435231|ref|YP_002266897.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Helicobacter pylori G27]
 gi|229486341|sp|B5Z8Y2|MNMA_HELPG RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|208433160|gb|ACI28031.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Helicobacter pylori G27]
          Length = 342

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 48/176 (27%), Gaps = 15/176 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS       ++   +  +         ++L          ++   K  +
Sbjct: 2   KIAVLLSGGVDSSYSAYSLKEQGHELVGVY--------LKLHASEKKHDLYIKNAQKACE 53

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG    L +        S++        ++   PN       ++    A   A +LG  
Sbjct: 54  FLGIP--LEVLDFQKDFKSTVYDEFISAYEEGQTPNPCTLCNPLMKFGLALDHALKLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            I  G                    T         L  E    +  PL  L K + 
Sbjct: 112 KIATGHYARVKEIDKVSYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDI 167


>gi|163846550|ref|YP_001634594.1| GMP synthase [Chloroflexus aurantiacus J-10-fl]
 gi|222524339|ref|YP_002568810.1| GMP synthase [Chloroflexus sp. Y-400-fl]
 gi|163667839|gb|ABY34205.1| GMP synthase, large subunit [Chloroflexus aurantiacus J-10-fl]
 gi|222448218|gb|ACM52484.1| GMP synthase, large subunit [Chloroflexus sp. Y-400-fl]
          Length = 513

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 45/186 (24%), Gaps = 17/186 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DS+           DR+  +  D G     E                +
Sbjct: 215 HGRVICALSGGVDSAVAALIIHRAIGDRLTCVFVDNGLLRAGE--------------AEQ 260

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +  E   +PL  +                +           R       A      L
Sbjct: 261 VIATFSEHFHVPLIAVDAREEFMTALKGVTDPEQKRKIIGEKFIRIFEREARALAGVEFL 320

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+     P      I+       L  +  + +  PL +L K E       
Sbjct: 321 AQGTLYPDVIESTAPDRPKA--AKIKTHHNVGGLPADMQLKLVEPLRYLFKDEVRAAGLQ 378

Query: 187 IGGQDL 192
           +G  + 
Sbjct: 379 LGLPET 384


>gi|330836678|ref|YP_004411319.1| argininosuccinate synthase [Spirochaeta coccoides DSM 17374]
 gi|329748581|gb|AEC01937.1| argininosuccinate synthase [Spirochaeta coccoides DSM 17374]
          Length = 413

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/167 (11%), Positives = 40/167 (23%), Gaps = 5/167 (2%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               +L +SGG D+S  L W  ++   V     D GQ    E    +  +         +
Sbjct: 3   KEKVILAYSGGLDTSVILKWLANKGYEVIAYVADVGQN---EDYKAIEKKAFATGASKVY 59

Query: 68  KDSLGEDHILP--LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            + L ++ +       L   +       +   +    +    +           A  A  
Sbjct: 60  IEDLRKELVTDYVFPALKANAVYENLYMLGTSLARPIIAKRHMEIAKKENTNIVAHGATG 119

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
            G   +        +                   +G    +      
Sbjct: 120 KGNDQVRFEFGYRMHMPDVRIISPWKDPEWLGTFVGRSDMIAYAEKH 166


>gi|22797882|emb|CAD42690.1| putative asparagine synthetase [uncultured crenarchaeote]
          Length = 563

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/129 (12%), Positives = 39/129 (30%), Gaps = 9/129 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M   +       ++FSGG DS      A      V   +   G +   ++   L + +K+
Sbjct: 261 MRKRVSDFKKIGIVFSGGIDSVIVAYLAKQMAPEVICYT--SGIKGSSDILNSLEIAEKL 318

Query: 61  VELMPK-------WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
              +          + ++ +   +           ++    A+K+         + G+  
Sbjct: 319 DLKLEIEQMTESDVESTIPKIISIIEDDNMGQVEVAIPIYGAVKLAHEQGIRVMLTGQGA 378

Query: 114 IFLVFAATL 122
             L    + 
Sbjct: 379 DELFGGYSW 387


>gi|293369466|ref|ZP_06616049.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides ovatus SD CMC 3f]
 gi|292635464|gb|EFF53973.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides ovatus SD CMC 3f]
          Length = 355

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 48/181 (26%), Gaps = 7/181 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
            L SGG DSS  +    ++  +        G      ++C     + I       +    
Sbjct: 5   ALLSGGVDSSVVVHLLCEQGYKPTLFYIKIGMDGAEYMDCS--AEEDIELSTATARKYGL 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
              ++ L    +   +     +    Q        +  + I F  F   +      T   
Sbjct: 63  SLEVVDLH--QEYWENVAAYAIDKIRQGLTPNPDVMCNKLIKFGCFEQRVGKDFDFTATG 120

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLAQDIGG 189
                   +G            +    L    ++ V     P+  L K E  ++A   G 
Sbjct: 121 HYATTLQRNGKTWLGTAKDPVKDQTDFLAQIDYLQVSKLMFPIGGLMKQEVREIANKAGL 180

Query: 190 Q 190
            
Sbjct: 181 P 181


>gi|284162667|ref|YP_003401290.1| argininosuccinate synthase [Archaeoglobus profundus DSM 5631]
 gi|284012664|gb|ADB58617.1| argininosuccinate synthase [Archaeoglobus profundus DSM 5631]
          Length = 394

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 53/181 (29%), Gaps = 27/181 (14%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             +L +SGG D++  +    +++  D V T++ D GQ             + I +   + 
Sbjct: 3   KVVLSYSGGLDTTVAIFLLKEKYGFDEVITVTVDIGQP-----------EEDIRKAEERG 51

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           K    + + +           +L + +    +           R II        A + G
Sbjct: 52  KKYADKHYTVD---AKKEFVEALMQLIKANGEYEGYVLGTALARPIIAEKVVEV-AKKEG 107

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I           +        +     +       V      + L +    + A++ 
Sbjct: 108 ADAI----------AHGCTGKGNDQLRFENVFYQYGFRVIAPMRELNLTREWEIEYAKEK 157

Query: 188 G 188
           G
Sbjct: 158 G 158


>gi|225874646|ref|YP_002756105.1| argininosuccinate synthase [Acidobacterium capsulatum ATCC 51196]
 gi|254807501|sp|C1F510|ASSY_ACIC5 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|225793473|gb|ACO33563.1| argininosuccinate synthase [Acidobacterium capsulatum ATCC 51196]
          Length = 445

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 23/57 (40%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + E       +    + +  D
Sbjct: 16 IAFSGGLDTSAALHWMKQKGALPYAYTANLGQPDETDYEAIPRKALEYGAEIARLID 72


>gi|225869459|ref|YP_002745407.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus equi subsp. zooepidemicus]
 gi|259495839|sp|C0MGQ2|MNMA_STRS7 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|225702735|emb|CAX00880.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus equi subsp. zooepidemicus]
          Length = 374

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 48/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 2   MTD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDY 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 58  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRSGRTPNPDVMCNKEIKFKAFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  +       PL  
Sbjct: 115 DYAMTLGADYVATGHYAQIKRDENGVVHMLRGFDKGKDQTYFLSQLSQKQLQKTMFPLGH 174

Query: 175 LKKYETWKLAQDIG 188
           L+K E   +A+  G
Sbjct: 175 LQKSEVRAIAEQAG 188


>gi|116327008|ref|YP_796728.1| argininosuccinate synthase [Leptospira borgpetersenii serovar
          Hardjo-bovis L550]
 gi|116332326|ref|YP_802044.1| argininosuccinate synthase [Leptospira borgpetersenii serovar
          Hardjo-bovis JB197]
 gi|122279947|sp|Q04P84|ASSY_LEPBJ RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|122285144|sp|Q056F0|ASSY_LEPBL RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|116119752|gb|ABJ77795.1| Argininosuccinate synthase [Leptospira borgpetersenii serovar
          Hardjo-bovis L550]
 gi|116126015|gb|ABJ77286.1| Argininosuccinate synthase [Leptospira borgpetersenii serovar
          Hardjo-bovis JB197]
          Length = 403

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 6  KKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNK 47
          K     +L +SGG D+S  L+W  +     V   + D GQ+ +
Sbjct: 5  KPVKKIVLAYSGGLDTSVILTWLKETYGCEVIAFTADVGQKEE 47


>gi|114569735|ref|YP_756415.1| GMP synthase [Maricaulis maris MCS10]
 gi|114340197|gb|ABI65477.1| GMP synthase (glutamine-hydrolyzing) [Maricaulis maris MCS10]
          Length = 519

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 53/184 (28%), Gaps = 17/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS       +   D++  +  D G   + E         ++V L    
Sbjct: 222 KRVLCGLSGGVDSSVAAVLLHEAIGDQLVCVFVDTGLMRQGE-------ADEVVTLFR-- 272

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                E + +PL                   +        +           A  A  L 
Sbjct: 273 -----EHYNIPLVHAEAEDLFLTALKGVDDPEKKRKIIGSLFIDVFDEKAKEAGGADFLA 327

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   V E+    +      TI++      L     + +  PL  L K E   L +++
Sbjct: 328 QGTLYPDVIESV--SFDGGPSVTIKSHHNVGGLPARMKMKLVEPLRELFKDEVRALGREL 385

Query: 188 GGQD 191
           G  D
Sbjct: 386 GLPD 389


>gi|152978287|ref|YP_001343916.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Actinobacillus succinogenes 130Z]
 gi|205811095|sp|A6VLY4|MNMA_ACTSZ RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|150840010|gb|ABR73981.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Actinobacillus succinogenes 130Z]
          Length = 389

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 52/184 (28%), Gaps = 9/184 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS        +  +VE L        + + +   C     +       D
Sbjct: 31  KVIVGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQAVCD 87

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG   +  +    +   +     ++            +  + I F  F    A  LG  
Sbjct: 88  KLG-IRLHKINFATEYWDNVFEHFLSEYKAGRTPNPDILCNKEIKFKAFLEYAAEDLGAD 146

Query: 130 NIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            I  G          D        +          L  +       P+  ++K     +A
Sbjct: 147 YIATGHYVRRSGPDHDAHLLRGLDNNKDQSYFLHALSKKQVGQSLFPVGEVEKTVVRAVA 206

Query: 185 QDIG 188
           +++G
Sbjct: 207 EELG 210


>gi|302672133|ref|YP_003832093.1| GMP synthase GuaA [Butyrivibrio proteoclasticus B316]
 gi|302396606|gb|ADL35511.1| GMP synthase GuaA [Butyrivibrio proteoclasticus B316]
          Length = 516

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 48/185 (25%), Gaps = 16/185 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +        ++  +  D+G            +RK   + +    
Sbjct: 219 KVLLALSGGVDSSVLAALLAKAIGKQLTCVFVDHG-----------LLRKNEGDEVESVF 267

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G   I  + +     + +  K V    +           R              L  
Sbjct: 268 GPNGNFDINFIRVNAAERYYAKLKGVEEP-ERKRKIIGEEFIRVFEEEAKKIGKVDFLAQ 326

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I   V E   SG                         +  PL  L K E  K   ++G
Sbjct: 327 GTIYPDVVE---SGLGGESVVIKSHHNVGGLPDYVDFKEIIEPLRLLFKDEVRKAGLELG 383

Query: 189 GQDLV 193
             + +
Sbjct: 384 LPEYL 388


>gi|188527826|ref|YP_001910513.1| GMP synthase [Helicobacter pylori Shi470]
 gi|226739632|sp|B2UUF1|GUAA_HELPS RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|188144066|gb|ACD48483.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Helicobacter pylori Shi470]
          Length = 508

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 52/180 (28%), Gaps = 16/180 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DS+   +       D +  +  D+G   K E E    + K +     +  
Sbjct: 211 KVLCAVSGGVDSTVVATLLHRAIKDNLIAVFVDHGLLRKNEKEKVQAMFKDL-----QIP 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  +   + L+ L  +S   L + +            F        L        ++  
Sbjct: 266 LNTIDAKEIFLSKLKGVSEPELKRKII----GETFIEAFEKEAKKHHLKG------KIEF 315

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   S         I+       L       +  PL  L K E   L +++G
Sbjct: 316 LAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEVRLLGKELG 375


>gi|119575282|gb|EAW54887.1| hCG40893, isoform CRA_b [Homo sapiens]
          Length = 213

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 42/156 (26%), Gaps = 4/156 (2%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +    S +L +SG  D+S  L W  ++   V     + GQ+   E         K     
Sbjct: 1   MSTKGSVVLAYSGSLDTSCTLLWLKEQGYDVIAYLANIGQKEDFEE--ARKNALKFGA-- 56

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            K          +   I   I  S+L ++  +        +      N         +  
Sbjct: 57  KKVFIEDVGREFVEEFIWPAIQSSALYEDRYLLGTSRQALHRLQTNGNHPVEGGQVYVPQ 116

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
             G   I        Y+           A +  I +
Sbjct: 117 HHGKWVIAPWRMPKFYNQLKGLNDLMEYAKQHRIPI 152


>gi|313680731|ref|YP_004058470.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Oceanithermus profundus DSM 14977]
 gi|313153446|gb|ADR37297.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Oceanithermus profundus DSM 14977]
          Length = 369

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/196 (12%), Positives = 50/196 (25%), Gaps = 22/196 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC-------------- 52
           K P  L+  SGG DSS   +  +++   V      +    ++   C              
Sbjct: 2   KKPRVLVAMSGGVDSSVAAALLVEQGYDVVGAMMKFWSDEELAESCNSESSCCTPTAALE 61

Query: 53  RLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN 112
              V +++             D  +    L            A +  +  +        +
Sbjct: 62  AGWVARQLGIPFELLDYRETFDERIVTPFLEGY--------AAGRTPNPCVWCNTDVKFD 113

Query: 113 IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
            +     A  A  +   + V  V                            +   +  P+
Sbjct: 114 ALLEHARAIGAEYVATGHYVRRVEGPAGVELWRGGDAAKDQTYFLWGTPRAALPHLLFPV 173

Query: 173 MWLKKYETWKLAQDIG 188
             L+K    +LA+  G
Sbjct: 174 GHLEKPAVRRLAEARG 189


>gi|305680191|ref|ZP_07403001.1| GMP synthase (glutamine-hydrolyzing) [Corynebacterium matruchotii
           ATCC 14266]
 gi|305660811|gb|EFM50308.1| GMP synthase (glutamine-hydrolyzing) [Corynebacterium matruchotii
           ATCC 14266]
          Length = 532

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 50/185 (27%), Gaps = 10/185 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+   +       DR+  +  D+G     E E                K
Sbjct: 228 RAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGEREQ---------VQTDFVK 278

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  +   +          + +T   A +    N           + L            
Sbjct: 279 ATGAKLVTVDEREAFLSKLAGVTDPEAKRKAIGNEFIRSFERAVGLVLADEPADTVGAVE 338

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +    +  PL  L K E   + +++G
Sbjct: 339 FLVQGTLYPDVVESGGGAGTANIKSHHNVGGLPEDLEFQLVEPLRLLFKDEVRAVGRELG 398

Query: 189 GQDLV 193
             + +
Sbjct: 399 LPEEI 403


>gi|225020538|ref|ZP_03709730.1| hypothetical protein CORMATOL_00545 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224946668|gb|EEG27877.1| hypothetical protein CORMATOL_00545 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 517

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 50/185 (27%), Gaps = 10/185 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+   +       DR+  +  D+G     E E                K
Sbjct: 213 RAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGEREQ---------VQTDFVK 263

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  +   +          + +T   A +    N           + L            
Sbjct: 264 ATGAKLVTVDEREAFLSKLAGVTDPEAKRKAIGNEFIRSFERAVGLVLADEPADTVGAVE 323

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +    +  PL  L K E   + +++G
Sbjct: 324 FLVQGTLYPDVVESGGGAGTANIKSHHNVGGLPEDLEFQLVEPLRLLFKDEVRAVGRELG 383

Query: 189 GQDLV 193
             + +
Sbjct: 384 LPEEI 388


>gi|20093296|ref|NP_619371.1| GMP synthase subunit B [Methanosarcina acetivorans C2A]
 gi|44887900|sp|Q8THK3|GUAAB_METAC RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
          AltName: Full=GMP synthetase
 gi|19918653|gb|AAM07851.1| GMP synthase (glutamine-hydrolyzing) [Methanosarcina acetivorans
          C2A]
          Length = 305

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
          K   A++  SGG DSS C   A     DR++ +  D G   K E E    +   + 
Sbjct: 20 KEGKAIIALSGGVDSSVCAELAYRAIGDRLQPIYIDTGLMRKGETERIKHIFSHMN 75


>gi|327399703|ref|YP_004340572.1| NH(3)-dependent NAD(+) synthetase [Hippea maritima DSM 10411]
 gi|327182332|gb|AEA34513.1| NH(3)-dependent NAD(+) synthetase [Hippea maritima DSM 10411]
          Length = 278

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 2/71 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            A+L  SGG DS+     A +    + V  +   Y   +K  +E  L V K        +
Sbjct: 35  KAVLGLSGGIDSAVVAYLAKEALGKENVYAILMPYKLSSKESVEDALKVVKDTGINYKIF 94

Query: 68  KDSLGEDHILP 78
           + +   D  + 
Sbjct: 95  EITKPADAYID 105


>gi|302336036|ref|YP_003801243.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Olsenella uli DSM 7084]
 gi|301319876|gb|ADK68363.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Olsenella uli DSM 7084]
          Length = 380

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 48/170 (28%), Gaps = 6/170 (3%)

Query: 12  LLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           + L  SGG DS+   +  +++   V+ +      R+     C       + +   +   +
Sbjct: 5   VCLGMSGGVDSALAAALLVEQGHDVKAVYMRNWSRDLPGFRC--TWADDLAD-AERVAVT 61

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           LG D  +           ++   +         PN  V     +     A  A+  G   
Sbjct: 62  LGLDLEVW--DCERTYKETVVDYLVDAYAHGYTPNPDVMCNQTVKFGAFAERAFAEGADF 119

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           +  G         P     +  A   + +    S            K +T
Sbjct: 120 VATGHYARVGVAPPMETAPSASAPAPSASAPAPSRRATLFRAADEHKDQT 169


>gi|293401686|ref|ZP_06645828.1| GMP synthase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291304944|gb|EFE46191.1| GMP synthase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 513

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 59/185 (31%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS   +       D++  +  D+G   K E      V +     M  
Sbjct: 215 KDKVLLGLSGGVDSSVVAALLHKAIGDQLICMFIDHGLLRKGE---AESVMETFGREMNV 271

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   H++ +    +   S L      + +   + N FV   +      +A      
Sbjct: 272 --------HLVKID-AKERFLSKLAGVSDPEKKRKIIGNEFVYTFDEEVKKISAG----E 318

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  +  G   TD          TI++      L  +    +  PL  L K E   L  +
Sbjct: 319 DIKWLAQGTLYTDVIESGTKTAQTIKSHHNVGGLPEDMQFQLIEPLNTLFKDEVRALGSE 378

Query: 187 IGGQD 191
           +G  D
Sbjct: 379 LGLPD 383


>gi|157813152|gb|ABV81321.1| putative GMP synthetase [Triops longicaudatus]
          Length = 197

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 2/62 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              L+L SGG DS+ C +         +V  +  D G     E E      + +   +  
Sbjct: 44  KQVLMLVSGGVDSTVCAALLHKALPQQQVIAVHIDNGFLRLDESEQVEVSLRALGLELQV 103

Query: 67  WK 68
            K
Sbjct: 104 VK 105


>gi|150398787|ref|YP_001322554.1| GMP synthase subunit B [Methanococcus vannielii SB]
 gi|166215315|sp|A6UN70|GUAAB_METVS RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
           AltName: Full=GMP synthetase
 gi|150011490|gb|ABR53942.1| GMP synthase, large subunit [Methanococcus vannielii SB]
          Length = 310

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 57/185 (30%), Gaps = 26/185 (14%)

Query: 10  SALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS           D++  +  D G   K E      + K+ + L     
Sbjct: 23  KTIIALSGGVDSSVAAVLTGKAIGDQLLAVYVDTGLMRKNESNEIWNIFKEQMGL----N 78

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             + E   L L+ L  I      + +                   IF+     +A   G 
Sbjct: 79  LKIVEAKDLFLSELAGIDDPEQKRKIIG----------------RIFIEVFEKVAKEQGE 122

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G              +        I L     + V  PL  L K E  KLA ++G
Sbjct: 123 EILVQGTIA-----PDWIESEGQIKTHHNIALPSGMVLEVVEPLRDLYKDEVRKLATELG 177

Query: 189 GQDLV 193
             + +
Sbjct: 178 LPEKI 182


>gi|139474609|ref|YP_001129325.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pyogenes str.
           Manfredo]
 gi|68053070|sp|Q5X9C1|MNMA_STRP6 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|166235086|sp|A2RH05|MNMA_STRPG RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205829106|sp|Q1J455|MNMA_STRPF RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|134272856|emb|CAM31137.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pyogenes str. Manfredo]
          Length = 373

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 50/192 (26%), Gaps = 12/192 (6%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +   +    ++  SGG DSS       ++   V  +             C     +   +
Sbjct: 1   MTDNSKIRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDYKD 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +           + +            + +    + +    PN  V     I        
Sbjct: 59  VAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDY 115

Query: 123 AYRLGITNIVIGVCET----DYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLK 176
           A  LG   +  G        +       R       +T     L  E       PL  L+
Sbjct: 116 AMTLGADYVATGHYAQVKRDENGTVHMLRGADNGKDQTYFLSQLSQEQLQKTLFPLGHLQ 175

Query: 177 KYETWKLAQDIG 188
           K E  ++A+  G
Sbjct: 176 KSEVREIAERAG 187


>gi|115522064|ref|YP_778975.1| argininosuccinate synthase [Rhodopseudomonas palustris BisA53]
 gi|122298193|sp|Q07VN9|ASSY_RHOP5 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|115516011|gb|ABJ03995.1| argininosuccinate synthase [Rhodopseudomonas palustris BisA53]
          Length = 445

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 3/72 (4%)

Query: 1  MNDIIK---KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M+ I+K   +  +  + FSGG D+S  L W   +  RV   + + GQ ++ + +      
Sbjct: 1  MSTILKSLPQGENVGIAFSGGLDTSAALLWMKQKGARVFAYTANLGQPDEADYDEIPRKA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 MEFGAEKARLVD 72


>gi|301114519|ref|XP_002999029.1| argininosuccinate synthase [Phytophthora infestans T30-4]
 gi|262111123|gb|EEY69175.1| argininosuccinate synthase [Phytophthora infestans T30-4]
          Length = 459

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 4/80 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M+   +     +L +SGG D+S  L W  ++   V     + GQ +  + E        +
Sbjct: 39  MSVKAQAGDKVVLAYSGGLDTSIILKWLTNKGFEVICYCANVGQ-HGEDYEKVRAKAMSL 97

Query: 61  VE---LMPKWKDSLGEDHIL 77
                 +   ++   + +I 
Sbjct: 98  GAKKVYIEDLREEFVKHYIF 117


>gi|153952360|ref|YP_001398379.1| argininosuccinate synthase [Campylobacter jejuni subsp. doylei
          269.97]
 gi|166219958|sp|A7H4E9|ASSY_CAMJD RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|152939806|gb|ABS44547.1| argininosuccinate synthase [Campylobacter jejuni subsp. doylei
          269.97]
          Length = 406

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 4/80 (5%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCV---RKK 59
          +  +    +L +SGG D+S  L W  D +   V T + D GQ  ++E   +  +    K+
Sbjct: 1  MKNEVKKVVLAYSGGLDTSIILKWLQDEYNCEVVTFTADIGQGEELEPARKKALSLGIKE 60

Query: 60 IVELMPKWKDSLGEDHILPL 79
              +   +D   +D++ P+
Sbjct: 61 ENIFIKDLRDEFVKDYVFPM 80


>gi|90417011|ref|ZP_01224940.1| argininosuccinate synthase [marine gamma proteobacterium HTCC2207]
 gi|90331358|gb|EAS46602.1| argininosuccinate synthase [marine gamma proteobacterium HTCC2207]
          Length = 405

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 44/158 (27%), Gaps = 7/158 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  + W  + +   V T + D GQ  +VE          + E+
Sbjct: 1   MSSVNKVVLAYSGGLDTSVIVKWLQEEYNCEVVTFTADIGQGEEVEPARAKAEALGVKEI 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  + +               + T      +   ++    +  R I          
Sbjct: 61  ------YIDDLREEYARDFVFPMFRANTIYEGEYLLGTSIARPLIAKRLIEIANETGADT 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
              G T         +   Y       + A     +L 
Sbjct: 115 ISHGATGKGNDQVRFELGAYALKPGIKVIAPWREWDLN 152


>gi|116192899|ref|XP_001222262.1| hypothetical protein CHGG_06167 [Chaetomium globosum CBS 148.51]
 gi|88182080|gb|EAQ89548.1| hypothetical protein CHGG_06167 [Chaetomium globosum CBS 148.51]
          Length = 407

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 3/68 (4%)

Query: 7  KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           A   + L +SGG D+S  L+W +++   V     D GQ    +        +KI     
Sbjct: 1  MAAKRVCLAYSGGLDTSVILAWLIEQGYTVVAFLADVGQNEDYDAVKAK--AEKIGAERM 58

Query: 66 KWKDSLGE 73
            ++   E
Sbjct: 59 IIQNLQQE 66


>gi|159487955|ref|XP_001701988.1| GMP synthetase [Chlamydomonas reinhardtii]
 gi|28630437|gb|AAO45104.1| GMP synthetase [Chlamydomonas reinhardtii]
 gi|158281207|gb|EDP06963.1| GMP synthetase [Chlamydomonas reinhardtii]
          Length = 535

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 47/182 (25%), Gaps = 9/182 (4%)

Query: 11  ALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+   +       DR+  +  D G    +    +  V       +     
Sbjct: 231 VICALSGGVDSTVAATLVHKVLGDRLHCVFVDNG---LLRYNEQQRVMDTFKNHLH-LPV 286

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              +     L  L  +  S           +               L        +  + 
Sbjct: 287 LCVDHSKPMLDRLRGL--SDPEAKRKAIGAEFIEVFKNYANELEKTLGRKPKYLVQGTLY 344

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
             VI  C    SG        I++      L  +    +  P   L K E   + + +G 
Sbjct: 345 PDVIESCPPPGSGQKHSHT--IKSHHNVGGLPKDLQFELVEPFRELFKDEVRAIGRLLGV 402

Query: 190 QD 191
            D
Sbjct: 403 PD 404


>gi|28210054|ref|NP_780998.1| hypothetical protein CTC00292 [Clostridium tetani E88]
 gi|28202489|gb|AAO34935.1| conserved protein [Clostridium tetani E88]
          Length = 326

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 25/74 (33%), Gaps = 3/74 (4%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           AL + SGG DS        D+   V  + F     +    E  + + K+I   +     
Sbjct: 3  RALAMISGGLDSILAAKLMKDQGIDVIGVCFK---SHFFNEESAIRMTKQIDIPLKIVDF 59

Query: 70 SLGEDHILPLAILG 83
          S     I+     G
Sbjct: 60 SEKHLEIVKNPKYG 73


>gi|332161230|ref|YP_004297807.1| argininosuccinate synthase [Yersinia enterocolitica subsp.
          palearctica 105.5R(r)]
 gi|325665460|gb|ADZ42104.1| argininosuccinate synthase [Yersinia enterocolitica subsp.
          palearctica 105.5R(r)]
          Length = 454

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 3/72 (4%)

Query: 1  MNDIIKK---APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I+K         + FSGG D+S  L W   +       + + GQ ++ + +      
Sbjct: 1  MTTILKHLPINQRVGIAFSGGLDTSAALLWMQKKGAIPYAYTANLGQPDEEDYDAIPRKA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 MEYGAEKARLID 72


>gi|325953943|ref|YP_004237603.1| argininosuccinate synthase [Weeksella virosa DSM 16922]
 gi|323436561|gb|ADX67025.1| argininosuccinate synthase [Weeksella virosa DSM 16922]
          Length = 393

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 1/77 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +  A+L +SGG D S   ++   ++   + T+  + G  +K EL+       ++     
Sbjct: 1  MSKKAVLAYSGGLDTSYCLVNLTQEQGMEMHTVIVNTGGFSKEELKEIEKRAYELGSAKH 60

Query: 66 KWKDSLGEDHILPLAIL 82
             D   +     +  L
Sbjct: 61 VTIDITEKYFTDCIRFL 77


>gi|322831512|ref|YP_004211539.1| argininosuccinate synthase [Rahnella sp. Y9602]
 gi|321166713|gb|ADW72412.1| argininosuccinate synthase [Rahnella sp. Y9602]
          Length = 453

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 3/72 (4%)

Query: 1  MNDIIKK---APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I+K         + FSGG D+S  L W   +       + + GQ ++ + +      
Sbjct: 1  MTTILKHLPINQRVGIAFSGGLDTSAALLWMQKKGAIPYAYTANLGQPDEEDYDAIPRKA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 MEYGAEKARLID 72


>gi|255994274|ref|ZP_05427409.1| GMP synthase domain protein [Eubacterium saphenum ATCC 49989]
 gi|255993942|gb|EEU04031.1| GMP synthase domain protein [Eubacterium saphenum ATCC 49989]
          Length = 326

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 50/185 (27%), Gaps = 25/185 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   LL  SGG DSS   +  +    D++  +  ++G   K E      V     +    
Sbjct: 36  SDRVLLALSGGVDSSVVAALLIKAVGDQLIGVHVNHGLMRKGE---SEQVISVFKDKFKA 92

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               L E              +    +    I+D       +    I      A     +
Sbjct: 93  DLIYLDE--------------TDRFLDKLKGIEDPEQKRKIIGSEFIEVFAEEARKHEGI 138

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                                 D I+A      L  +    +  P+  L K E   + + 
Sbjct: 139 K-------FLGQGTIYPDILESDGIKAHHNVGGLPEDLKFELVEPIRLLYKDEVRVVGKA 191

Query: 187 IGGQD 191
           +G  D
Sbjct: 192 LGLPD 196


>gi|240138880|ref|YP_002963355.1| argininosuccinate synthase (citrulline-aspartate ligase)
          [Methylobacterium extorquens AM1]
 gi|240008852|gb|ACS40078.1| argininosuccinate synthase (citrulline-aspartate ligase)
          [Methylobacterium extorquens AM1]
          Length = 413

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 10/87 (11%)

Query: 1  MNDII--KKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVR 57
          M+D +  K     +L +SGG D+S  L W        V T + D GQ  ++E        
Sbjct: 1  MSDALPNKSVKKVVLAYSGGLDTSIILKWLQTTYGCEVVTFTADLGQGEELEP--ARRKA 58

Query: 58 KKIV-----ELMPKWKDSLGEDHILPL 79
          + +        +   ++    D++ P+
Sbjct: 59 ELLGIRPENIFIEDLREEFVRDYVFPM 85


>gi|238750013|ref|ZP_04611517.1| Argininosuccinate synthase [Yersinia rohdei ATCC 43380]
 gi|238711942|gb|EEQ04156.1| Argininosuccinate synthase [Yersinia rohdei ATCC 43380]
          Length = 454

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 3/72 (4%)

Query: 1  MNDIIKK---APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I+K         + FSGG D+S  L W   +       + + GQ ++ + +      
Sbjct: 1  MTTILKHLPINQRVGIAFSGGLDTSAALLWMQKKGAIPYAYTANLGQPDEEDYDAIPRKA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 MEYGAEKARLID 72


>gi|229892363|gb|ACQ89825.1| MIP06849p [Drosophila melanogaster]
          Length = 283

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 2/38 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYG 43
               LLL SGG DSS C +         ++  +  D G
Sbjct: 228 NNKVLLLVSGGVDSSVCAALLRRALYPHQIIAVHVDNG 265


>gi|218530522|ref|YP_002421338.1| argininosuccinate synthase [Methylobacterium chloromethanicum
          CM4]
 gi|218522825|gb|ACK83410.1| Argininosuccinate synthase [Methylobacterium chloromethanicum
          CM4]
          Length = 413

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 10/87 (11%)

Query: 1  MNDII--KKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVR 57
          M+D +  K     +L +SGG D+S  L W        V T + D GQ  ++E        
Sbjct: 1  MSDALPNKSVKKVVLAYSGGLDTSIILKWLQTTYGCEVVTFTADLGQGEELEP--ARRKA 58

Query: 58 KKIV-----ELMPKWKDSLGEDHILPL 79
          + +        +   ++    D++ P+
Sbjct: 59 ELLGIKPENIFIEDLREEFVRDYVFPM 85


>gi|163851716|ref|YP_001639759.1| argininosuccinate synthase [Methylobacterium extorquens PA1]
 gi|254561488|ref|YP_003068583.1| argininosuccinate synthase [Methylobacterium extorquens DM4]
 gi|163663321|gb|ABY30688.1| Argininosuccinate synthase [Methylobacterium extorquens PA1]
 gi|254268766|emb|CAX24727.1| argininosuccinate synthase (citrulline-aspartate ligase)
          [Methylobacterium extorquens DM4]
          Length = 413

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 10/87 (11%)

Query: 1  MNDII--KKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVR 57
          M+D +  K     +L +SGG D+S  L W        V T + D GQ  ++E        
Sbjct: 1  MSDALPNKSVKKVVLAYSGGLDTSIILKWLQTTYGCEVVTFTADLGQGEELEP--ARRKA 58

Query: 58 KKIV-----ELMPKWKDSLGEDHILPL 79
          + +        +   ++    D++ P+
Sbjct: 59 ELLGIKPENIFIEDLREEFVRDYVFPM 85


>gi|123442896|ref|YP_001006871.1| argininosuccinate synthase [Yersinia enterocolitica subsp.
          enterocolitica 8081]
 gi|166221030|sp|A1JTL6|ASSY_YERE8 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|122089857|emb|CAL12713.1| argininosuccinate synthase [Yersinia enterocolitica subsp.
          enterocolitica 8081]
 gi|318605125|emb|CBY26623.1| argininosuccinate synthase [Yersinia enterocolitica subsp.
          palearctica Y11]
          Length = 454

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 3/72 (4%)

Query: 1  MNDIIKK---APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I+K         + FSGG D+S  L W   +       + + GQ ++ + +      
Sbjct: 1  MTTILKHLPINQRVGIAFSGGLDTSAALLWMQKKGAIPYAYTANLGQPDEEDYDAIPRKA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 MEYGAEKARLID 72


>gi|50312295|ref|XP_456180.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49645316|emb|CAG98888.1| KLLA0F24706p [Kluyveromyces lactis]
          Length = 415

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/198 (12%), Positives = 60/198 (30%), Gaps = 17/198 (8%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR------------NKVELE 51
           +  K  + ++  SGG DSS C +     +  V  +      +             + E +
Sbjct: 25  MPSKFDNIVVGMSGGVDSSVCAALFAA-YPNVHGVYMQNWGKDQSLTRPEEDPCYEKEWK 83

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
               V K +   +P    +  +D+ L +       +S           +  +    +   
Sbjct: 84  DAEKVAKHLN--IPVEFVNFEKDYWLNVFAPMLEQYSMGYTPNPDIGCNQFVKFGKLMDH 141

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI--NLGMESHVTVH 169
             +                I+      + S     R    +  ++     + + S   + 
Sbjct: 142 LDVKFGKNNYWLVMGHYARILRRDSGPERSEPHLMRGLYQQKDQSYYLSQVSVPSLNQMI 201

Query: 170 TPLMWLKKYETWKLAQDI 187
            P+  L K E  ++A+++
Sbjct: 202 LPIGHLTKPEVREMAKEV 219


>gi|238792640|ref|ZP_04636272.1| Argininosuccinate synthase [Yersinia intermedia ATCC 29909]
 gi|238727996|gb|EEQ19518.1| Argininosuccinate synthase [Yersinia intermedia ATCC 29909]
          Length = 454

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 3/72 (4%)

Query: 1  MNDIIKK---APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I+K         + FSGG D+S  L W   +       + + GQ ++ + +      
Sbjct: 1  MTTILKHLPINQRVGIAFSGGLDTSAALLWMQKKGAIPYAYTANLGQPDEEDYDAIPRKA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 MEYGAEKARLID 72


>gi|238789466|ref|ZP_04633251.1| Argininosuccinate synthase [Yersinia frederiksenii ATCC 33641]
 gi|238722416|gb|EEQ14071.1| Argininosuccinate synthase [Yersinia frederiksenii ATCC 33641]
          Length = 454

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 3/72 (4%)

Query: 1  MNDIIKK---APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I+K         + FSGG D+S  L W   +       + + GQ ++ + +      
Sbjct: 1  MTTILKHLPINQRVGIAFSGGLDTSAALLWMQKKGAIPYAYTANLGQPDEEDYDAIPRKA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 MEYGAEKARLID 72


>gi|238795696|ref|ZP_04639210.1| Argininosuccinate synthase [Yersinia mollaretii ATCC 43969]
 gi|238720422|gb|EEQ12224.1| Argininosuccinate synthase [Yersinia mollaretii ATCC 43969]
          Length = 454

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 3/72 (4%)

Query: 1  MNDIIKK---APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I+K         + FSGG D+S  L W   +       + + GQ ++ + +      
Sbjct: 1  MTTILKHLPINQRVGIAFSGGLDTSAALLWMQKKGAIPYAYTANLGQPDEEDYDAIPRKA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 MEYGAEKARLID 72


>gi|238784301|ref|ZP_04628312.1| Argininosuccinate synthase [Yersinia bercovieri ATCC 43970]
 gi|238714729|gb|EEQ06730.1| Argininosuccinate synthase [Yersinia bercovieri ATCC 43970]
          Length = 454

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 3/72 (4%)

Query: 1  MNDIIKK---APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I+K         + FSGG D+S  L W   +       + + GQ ++ + +      
Sbjct: 1  MTTILKHLPINQRVGIAFSGGLDTSAALLWMQKKGAIPYAYTANLGQPDEEDYDAIPRKA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 MEYGAEKARLID 72


>gi|332970210|gb|EGK09204.1| GMP synthase [Desmospora sp. 8437]
          Length = 508

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 52/184 (28%), Gaps = 20/184 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS   +       D++  +  D+G   K E      V     +    
Sbjct: 213 EKRVLCALSGGVDSSVVAALIHRAIGDQLTCVFVDHGLLRKGE---ADSVMGTFADHFHM 269

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +       L+ L  ++     + +                R              L
Sbjct: 270 NVVKVDARERF-LSKLKGVTDPEKKRKIIGNE----------FIRVFEEETEKLGKHDFL 318

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   + E+           TI++      L  +  + +  P+  L K E  K+ ++
Sbjct: 319 AQGTLYTDIVESGT-----ETAQTIKSHHNVGGLPEDMQMDLVEPVNTLFKDEVRKVGEE 373

Query: 187 IGGQ 190
           +G  
Sbjct: 374 LGLP 377


>gi|310657467|ref|YP_003935188.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium sticklandii DSM 519]
 gi|308824245|emb|CBH20283.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium sticklandii]
          Length = 372

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/132 (12%), Positives = 31/132 (23%), Gaps = 5/132 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                +L  SGG DSS       +    V  +        + + +      +   ++   
Sbjct: 1   MKKRVVLGMSGGVDSSVSAVILKEAGYDVVGIFMKNWD--EKDEDGVCTATEDYEDVRRV 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   + +            +      +      PN  V     I        A +L
Sbjct: 59  ADQLGIPYYTVN---FEKEYWDRVFSYFLDEYNKGRTPNPDVMCNQEIKFNAFLDYALKL 115

Query: 127 GITNIVIGVCET 138
               I +G    
Sbjct: 116 DADYIAMGHYAR 127


>gi|305663003|ref|YP_003859291.1| GMP synthase (glutamine-hydrolyzing) [Ignisphaera aggregans DSM
           17230]
 gi|304377572|gb|ADM27411.1| GMP synthase (glutamine-hydrolyzing) [Ignisphaera aggregans DSM
           17230]
          Length = 520

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 57/184 (30%), Gaps = 20/184 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DS+T          DR+  +  ++G   + E E  L + + +       
Sbjct: 226 EKVLCAVSGGIDSTTTALLVKKAIGDRLVAVFVNHGLLREGEAEEVLNMLRNLG-----I 280

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                +   + L  L  +      + +  ++      +     + I +L    T    + 
Sbjct: 281 NPIYIDASKMFLDALKGVRDCEEKRRIIGELFAKIFKDIVESDKFIKWLAQGTTYPDVIE 340

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +                 D I++      L     + +  P+ +L K E   +A  +
Sbjct: 341 SGFVP--------------GADRIKSHHNVAGLPSWLGLKLLEPIKYLYKDEVRAIALRL 386

Query: 188 GGQD 191
           G  +
Sbjct: 387 GVPE 390


>gi|150398931|ref|YP_001322698.1| PP-loop domain-containing protein [Methanococcus vannielii SB]
 gi|150011634|gb|ABR54086.1| PP-loop domain protein [Methanococcus vannielii SB]
          Length = 323

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 25/83 (30%), Gaps = 7/83 (8%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRLCVR 57
           N+II      ++  SGG+DS   L             +  ++ D                
Sbjct: 69  NNIISPKDKVVVGLSGGKDSLALLHLLEPYKRKYGVEIHAITVDLNIDGIRPW---NETN 125

Query: 58  KKIVELMPKWKDSLGEDHILPLA 80
           K +  +    ++      I+P  
Sbjct: 126 KNVKMISKTCENLNIPHKIIPYD 148


>gi|148259759|ref|YP_001233886.1| argininosuccinate synthase [Acidiphilium cryptum JF-5]
 gi|172047764|sp|A5FWI5|ASSY_ACICJ RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|146401440|gb|ABQ29967.1| argininosuccinate synthase [Acidiphilium cryptum JF-5]
          Length = 409

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 6/83 (7%)

Query: 9  PSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVE---LM 64
             +L +SGG D+S  L W   +R   V T + D GQ  ++E        +        +
Sbjct: 7  KKVVLAYSGGLDTSVILRWLQTERGAEVVTFTADLGQGEELEP--ARRKAEMFGVKEIFV 64

Query: 65 PKWKDSLGEDHILPLAILGDISH 87
             +++  +D + P+     +  
Sbjct: 65 EDLRETFVKDFVFPMFRANALYE 87


>gi|260438547|ref|ZP_05792363.1| argininosuccinate synthase [Butyrivibrio crossotus DSM 2876]
 gi|292809136|gb|EFF68341.1| argininosuccinate synthase [Butyrivibrio crossotus DSM 2876]
          Length = 407

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 59/212 (27%), Gaps = 24/212 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
            A   +L +SGG D++  + W  +     V     + GQ +++E              + 
Sbjct: 1   MADKVVLAYSGGLDTTAIIPWLKETYGYDVICCCVNVGQESELEG-------------LD 47

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +     G + +    ++ ++    +   V       N           +       +A +
Sbjct: 48  ERAKYSGAEKLYIEDVVDELCDEYIMPTVKANAVYENKYLLGTSFARPLIAKKLVEVARK 107

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G   I  G                  A +  +                  + +     +
Sbjct: 108 EGAVAICHGATGKGNDQLRFELSIKALAPDIKVIATWRQPEWTMQ-----SREDEIAFCK 162

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
             G    ++L  + SH+ Y   R+  +    G
Sbjct: 163 AHG----IDLPFDASHS-YSRDRNIWHISHEG 189


>gi|253698721|ref|YP_003019910.1| thiamine biosynthesis protein [Geobacter sp. M21]
 gi|251773571|gb|ACT16152.1| thiamine biosynthesis protein [Geobacter sp. M21]
          Length = 334

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
              A+ L SGG DS+  +   LD+   VE L+F
Sbjct: 1  MQRKAIALLSGGLDSTLAVKVLLDQGIAVEALNF 34


>gi|254421737|ref|ZP_05035455.1| glutamine amidotransferase, SNO family [Synechococcus sp. PCC 7335]
 gi|196189226|gb|EDX84190.1| glutamine amidotransferase, SNO family [Synechococcus sp. PCC 7335]
          Length = 542

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 50/183 (27%), Gaps = 11/183 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSST          +++  +  D G   K E E    + +          
Sbjct: 240 RVLLALSGGVDSSTLAFLLHKAIGEQLTCMFIDQGFMRKREPE---RLIEIFNNRFHINV 296

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           + +         +      +   +   +   +          R    L     LA     
Sbjct: 297 EYIDAR---DRFLAKIKGVTDPEEKRKIIGHEFIQVFEEESTR----LGPFDYLAQGTLY 349

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
            +++            +     I++      L  +    +  PL  L K E  K+   + 
Sbjct: 350 PDVIESADTNVDPSTGERVAVKIKSHHNVGGLPEDLRFKLIEPLRKLFKDEVRKVGTAVN 409

Query: 189 GQD 191
             +
Sbjct: 410 LPE 412


>gi|194467785|ref|ZP_03073771.1| Argininosuccinate synthase [Lactobacillus reuteri 100-23]
 gi|194452638|gb|EDX41536.1| Argininosuccinate synthase [Lactobacillus reuteri 100-23]
          Length = 410

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 46/171 (26%), Gaps = 13/171 (7%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               +L +SGG D+S  ++W  ++   V     D G     E +    +++K        
Sbjct: 3   KEKIVLAYSGGLDTSVAIAWLKNKGYDVIACCIDVG-----EGKDLEAIKEK-------- 49

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +G    + +    D +   +   +                   + +     +A + G
Sbjct: 50  GLQVGAWKSVVIDAKRDFAEQFVLPALQAHAMYEQKYPLVSALSRPLIVQKLVAVANQYG 109

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            T I  G                  A +  I   +          +   K 
Sbjct: 110 ATAIAHGCTGKGNDQVRFEAGIHALAPDMKIEDPIRDWHWSREEEIQYAKD 160


>gi|159905464|ref|YP_001549126.1| ExsB family protein [Methanococcus maripaludis C6]
 gi|159886957|gb|ABX01894.1| ExsB family protein [Methanococcus maripaludis C6]
          Length = 261

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 52/188 (27%), Gaps = 5/188 (2%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD--YGQRNKVELECRLCVRKKIVELM 64
           K   A++ FSGG DS T       +   +  ++    Y    + E      VR+  + + 
Sbjct: 62  KKEKAVVAFSGGVDS-TASIIVGKKIFEICAVTVRSKYIMDAETEENVSELVRR--LNVS 118

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            ++ D   +                    V  +I +    N          L        
Sbjct: 119 HEFIDVNLDPIFEDTKSGKYHPCGRCHSTVETEILNYAEKNGINYIIYGDMLSIGHLSIK 178

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           +     I + +         + R+                 +        ++K+   ++ 
Sbjct: 179 KTDKGLIRLNILSFLSMAKDESRNILKEFNININQSYGCQLIRKAHKHKNMQKFTIQRVL 238

Query: 185 QDIGGQDL 192
           +++  Q +
Sbjct: 239 REVRAQVI 246


>gi|197116482|ref|YP_002136909.1| thiamin biosynthesis protein ThiI-like adenine nucleotide alpha
          hydrolase superfamily protein [Geobacter bemidjiensis
          Bem]
 gi|197085842|gb|ACH37113.1| thiamin biosynthesis protein ThiI-related adenine nucleotide
          alpha hydrolase superfamily protein [Geobacter
          bemidjiensis Bem]
          Length = 334

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
              A+ L SGG DS+  +   LD+   VE L+F
Sbjct: 1  MQRKAIALLSGGLDSTLAVKVLLDQGIAVEALNF 34


>gi|222823759|ref|YP_002575333.1| argininosuccinate synthetase [Campylobacter lari RM2100]
 gi|254807514|sp|B9KG97|ASSY_CAMLR RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|222538981|gb|ACM64082.1| argininosuccinate synthetase [Campylobacter lari RM2100]
          Length = 406

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 49/184 (26%), Gaps = 8/184 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + K     +L +SGG D+S  L W  D +   V T + D GQ  ++E          +  
Sbjct: 1   MKKDIKKVVLAYSGGLDTSIILKWLQDEYKSEVVTFTADIGQGEELEP--ARKKALSLGV 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     +D  +   +       +        +   ++    +    +         
Sbjct: 59  KEENIFIKDLKDEFVKDYVFA--MFRANAIYEGEYLLGTSIARPLIAKALVEIANKTNAD 116

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A   G T         +        +  I A     +L     +  +     +      K
Sbjct: 117 AISHGATGKGNDQVRFELGALALNPNLAIIAPWREWDLNSREKLLAYAQKHGID---IVK 173

Query: 183 LAQD 186
            A  
Sbjct: 174 KADK 177


>gi|260171069|ref|ZP_05757481.1| tRNA-specific 2-thiouridylase MnmA [Bacteroides sp. D2]
 gi|315919389|ref|ZP_07915629.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313693264|gb|EFS30099.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 355

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 48/181 (26%), Gaps = 7/181 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
            L SGG DSS  +    ++  +        G      ++C     + I       +    
Sbjct: 5   ALLSGGVDSSVVVHLLCEQGYKPTLFYIKIGMDGAEYMDCS--AEEDIELSTATARKYGL 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
              ++ L    +   +     +    Q        +  + I F  F   +      T   
Sbjct: 63  SLEVVDLH--QEYWENVAAYAIDKIRQGLTPNPDVMCNKLIKFGCFEQRVGKDFDFTATG 120

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLAQDIGG 189
                   +G            +    L    ++ V     P+  L K E  ++A   G 
Sbjct: 121 HYATTLQRNGKTWLGTAKDPVKDQTDFLAQIDYLQVSKLMFPIGGLMKQEVREIANKAGL 180

Query: 190 Q 190
            
Sbjct: 181 P 181


>gi|256827441|ref|YP_003151400.1| GMP synthase (glutamine-hydrolyzing) [Cryptobacterium curtum DSM
           15641]
 gi|256583584|gb|ACU94718.1| GMP synthase (glutamine-hydrolyzing) [Cryptobacterium curtum DSM
           15641]
          Length = 530

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 48/185 (25%), Gaps = 16/185 (8%)

Query: 8   APSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +L  SGG DSS   +  A     ++  +  ++G   K E E    V  K       
Sbjct: 220 SDRMILALSGGVDSSVVAALCAKAVGKQLTCVFVNHGLLRKGEPEQVEEVFTK------- 272

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     +    +      +      +  +           +    +         L
Sbjct: 273 -------QFDIDFVHVHAEERYAKLLAGVVDPEQKRRIIGTQFWKEFFAVAQETGGIKYL 325

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                +        +     +  TI++    I         +  PL    K E   L + 
Sbjct: 326 -AQGTIYPDIIESGARKTGGKASTIKSHHNLIPFPEGVRFDLIEPLDHFFKDEVRALGEA 384

Query: 187 IGGQD 191
           +G  D
Sbjct: 385 LGLPD 389


>gi|268536380|ref|XP_002633325.1| Hypothetical protein CBG06062 [Caenorhabditis briggsae]
          Length = 377

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/200 (12%), Positives = 48/200 (24%), Gaps = 10/200 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---------DYGQRNKVELECRLCVR 57
           K P  ++  SGG DS+        +   V  L                   +      V 
Sbjct: 2   KVPRVVIGMSGGVDSAVSAFLLKQKGFDVVGLHMINWDSQEEGSSTCPRSKDEADARNVC 61

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
            ++              + + L  L +      T                   +      
Sbjct: 62  NRLNIPFHTVNFVKEYWNHVFLKFLENYKIGRTTVPDIDCNYSIKFDAFHKVAQETFDAD 121

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW-LK 176
           F AT  Y            +   +       D ++     +    +  +      +  L+
Sbjct: 122 FIATGHYATTSFGDFQQNRKHSEAIRLFSGRDPLKDQTFFLCTVTQEQLKRAMFPLGSLQ 181

Query: 177 KYETWKLAQDIGGQDLVNLI 196
           K E  ++A+  G   +V   
Sbjct: 182 KSEVKRIAEQQGFHRVVKKP 201


>gi|331003353|ref|ZP_08326856.1| GMP synthase [Lachnospiraceae oral taxon 107 str. F0167]
 gi|330412623|gb|EGG92008.1| GMP synthase [Lachnospiraceae oral taxon 107 str. F0167]
          Length = 517

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 44/187 (23%), Gaps = 16/187 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS           D +  +  D+G            +RK   + +  
Sbjct: 218 NGKVLCALSGGVDSSVAAVMLSKAVGDNLTCVFVDHG-----------LLRKNEGDEVEA 266

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G   +  + +       +    V+   +           R              L
Sbjct: 267 VFGPNGNYKLNFIRVNAAERFYAKLAGVSEP-EKKRKVIGEEFIRVFEEEAKKIGKVDFL 325

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   + E   SG                         +  PL  L K E  K   +
Sbjct: 326 VQGTIYPDIVE---SGLGGESVVIKSHHNVGGLPDYVDFKEIIEPLRDLFKDEVRKAGLE 382

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 383 LGIPKHL 389


>gi|323694000|ref|ZP_08108184.1| asparagine synthase [Clostridium symbiosum WAL-14673]
 gi|323501936|gb|EGB17814.1| asparagine synthase [Clostridium symbiosum WAL-14673]
          Length = 144

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 6/73 (8%)

Query: 1  MNDIIKKAPS--ALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRL 54
          +N ++ +       + FSGG DSS  L  A D   +    V  ++F+       +L+   
Sbjct: 13 LNQMMDEYGKGPVCIAFSGGVDSSLLLKIACDNGRKYKTPVYAVTFNTMLHPACDLDTAK 72

Query: 55 CVRKKIVELMPKW 67
           V +++       
Sbjct: 73 KVARELGAEHVVI 85


>gi|312114447|ref|YP_004012043.1| GMP synthase, large subunit [Rhodomicrobium vannielii ATCC 17100]
 gi|311219576|gb|ADP70944.1| GMP synthase, large subunit [Rhodomicrobium vannielii ATCC 17100]
          Length = 525

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 53/185 (28%), Gaps = 12/185 (6%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS       +   D++  +  D+G     E E      + +      
Sbjct: 222 NERVICGLSGGVDSSVAAVLIHEAIGDQLTCIYVDHGLMRLGESE------QVVGMFRDH 275

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +   L   H+    +  D            K         F      I         +  
Sbjct: 276 YNIPLV--HVDASDLFIDQLEGEADPEKKRKTIGRLFIEVFEAEAKKIAADGRGAPRFLA 333

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
             T     +    +SG P      I++      L    H+ +  PL  L K E   L ++
Sbjct: 334 QGTLYPDVIESVSFSGGPSVT---IKSHHNVGGLPERMHMKLVEPLRELFKDEVRALGRE 390

Query: 187 IGGQD 191
           +G  +
Sbjct: 391 LGLPE 395


>gi|283783106|ref|YP_003373860.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Gardnerella vaginalis 409-05]
 gi|298253862|ref|ZP_06977449.1| GMP synthase [Gardnerella vaginalis 5-1]
 gi|283441154|gb|ADB13620.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Gardnerella vaginalis 409-05]
 gi|297532005|gb|EFH70980.1| GMP synthase [Gardnerella vaginalis 5-1]
          Length = 520

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 56/184 (30%), Gaps = 11/184 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+   +       +++  +  D+G   K E+E    V+   VE       
Sbjct: 218 VICGLSGGVDSAVAAALVHKAIGNQLTCVFVDHGLLRKGEVE---QVKHDFVEATGIKLI 274

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++  +       L  +   S  +     I +  +       R +I          +    
Sbjct: 275 AVDAE----DDFLNALKGVSEPERKRKIIGEKFIRTFEKAQRQVIEEAGKTGAEVK---F 327

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +    +  PL  L K E   +  ++G 
Sbjct: 328 LVQGTLYPDVVESGGGDGAANIKSHHNVGGLPKDLKFKLIEPLRTLFKDEVRAIGTELGL 387

Query: 190 QDLV 193
            D +
Sbjct: 388 PDEI 391


>gi|205372406|ref|ZP_03225220.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Bacillus coahuilensis m4-4]
          Length = 517

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 59/186 (31%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            + L   SGG DSS           D++  +  D+G    +  +    V K   E     
Sbjct: 223 KNVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHG---LLRKDEAEGVMKTFSE----- 274

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G +  +      D   S L      + +   + N F+   +          A   G
Sbjct: 275 ----GFNMNVIKVDAKDRFLSKLEGVSDPEKKRKIIGNEFIYVFDDEA-------AKLEG 323

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G   TD          TI++      L  +    +  PL  L K E  KL  ++
Sbjct: 324 IDYLAQGTLYTDIIESGTATAQTIKSHHNVGGLPEDMKFQLIEPLNTLFKDEVRKLGSEL 383

Query: 188 GGQDLV 193
           G  D +
Sbjct: 384 GIPDEI 389


>gi|170699615|ref|ZP_02890654.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia ambifaria IOP40-10]
 gi|170135497|gb|EDT03786.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia ambifaria IOP40-10]
          Length = 384

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 42/189 (22%), Gaps = 10/189 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS       ++   V  L     + +     C         + +   
Sbjct: 3   KRRVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQ-----DWIDVV 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +      +            +      +      PN  V     I        A  L 
Sbjct: 58  SVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLD 117

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G                    T         L          PL  + K +  +
Sbjct: 118 AEMIATGHYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTKVRE 177

Query: 183 LAQDIGGQD 191
           +A  IG  +
Sbjct: 178 IAAQIGLPN 186


>gi|169351304|ref|ZP_02868242.1| hypothetical protein CLOSPI_02084 [Clostridium spiroforme DSM 1552]
 gi|169292366|gb|EDS74499.1| hypothetical protein CLOSPI_02084 [Clostridium spiroforme DSM 1552]
          Length = 515

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 46/187 (24%), Gaps = 16/187 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS           +++  +  D+G            +RK   + + +
Sbjct: 216 NGKVLCALSGGVDSSVAAVLLSKAIGNQLTCVFVDHG-----------LLRKNEGDEVEE 264

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G  + L    +              + +           R              L
Sbjct: 265 VFGPNG-HYELNFIRVNAQQRYYDKLKGIEEPEAKRKIIGEEFIRVFEEEAKKIGTVDFL 323

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E   SG                         +  PL  L K E  K+  +
Sbjct: 324 VQGTIYPDVVE---SGLGGESAVIKSHHNVGGLPDAVDFKEIIEPLRDLFKDEVRKVGLE 380

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 381 LGIPEYL 387


>gi|172059678|ref|YP_001807330.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia ambifaria MC40-6]
 gi|205811349|sp|B1YTE9|MNMA_BURA4 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|171992195|gb|ACB63114.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia ambifaria MC40-6]
          Length = 389

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 42/189 (22%), Gaps = 10/189 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS       ++   V  L     + +     C         + +   
Sbjct: 3   KRRVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQ-----DWIDVV 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +      +            +      +      PN  V     I        A  L 
Sbjct: 58  SVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLD 117

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G                    T         L          PL  + K +  +
Sbjct: 118 AEMIATGHYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTKVRE 177

Query: 183 LAQDIGGQD 191
           +A  IG  +
Sbjct: 178 IAAQIGLPN 186


>gi|115350645|ref|YP_772484.1| tRNA-specific 2-thiouridylase MnmA [Burkholderia ambifaria AMMD]
 gi|122323996|sp|Q0BI73|MNMA_BURCM RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|115280633|gb|ABI86150.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia ambifaria AMMD]
          Length = 384

 Score = 47.2 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 42/189 (22%), Gaps = 10/189 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS       ++   V  L     + +     C         + +   
Sbjct: 3   KRRVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQ-----DWIDVV 57

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +      +            +      +      PN  V     I        A  L 
Sbjct: 58  SVADLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLD 117

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G                    T         L          PL  + K +  +
Sbjct: 118 AEMIATGHYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTKVRE 177

Query: 183 LAQDIGGQD 191
           +A  IG  +
Sbjct: 178 IAAQIGLPN 186


>gi|330816384|ref|YP_004360089.1| hypothetical protein bgla_1g14630 [Burkholderia gladioli BSR3]
 gi|327368777|gb|AEA60133.1| hypothetical protein bgla_1g14630 [Burkholderia gladioli BSR3]
          Length = 467

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/220 (13%), Positives = 58/220 (26%), Gaps = 20/220 (9%)

Query: 13  LLFSGGQDSS--TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           + FS G DS     L         V  +  D       + +  L  ++            
Sbjct: 150 VPFSHGLDSYGQVRLLQQTQPEAEVVCIHADARG-ASGDSDTGLKWKR------------ 196

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                 + + ++      +     +       L            ++        LG + 
Sbjct: 197 TDRIRYIRVPVVVKNIGHAEPSFRSRPFMFYLLAGFGALESGSNKVMIPENGQGSLGGSL 256

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +  G      S YP         +   +       V  + P ++  K +  +   D G  
Sbjct: 257 VTTGHEPKHRSCYPGFTT----KLSRFLEALTGKRVQFYHPALFQTKGQVLQALVDAGED 312

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
               L +  S +C   +     +  Y C  C  C LR+  
Sbjct: 313 VRDVLRMHRSCSC-DARLASLSKQLYHCGVCGNCLLRRTA 351


>gi|317178374|dbj|BAJ56162.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Helicobacter pylori F30]
          Length = 342

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 48/176 (27%), Gaps = 15/176 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS       ++   +  +         ++L          ++   K  +
Sbjct: 2   KIAVLLSGGVDSSYSAYSLKEQGHELVGIY--------LKLHASEKKHDLYIKNTQKACE 53

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG    L +        S++        ++   PN       ++    A   A +LG  
Sbjct: 54  FLGIP--LEVLDFQKDFKSAVYDEFISAYEEGQTPNPCALCNPLMKFGLALDYALKLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            I  G                    T         L  E    +  PL  L K + 
Sbjct: 112 KIATGHYARVKEIDKVSYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDI 167


>gi|260223353|emb|CBA33833.1| Argininosuccinate synthase [Curvibacter putative symbiont of
          Hydra magnipapillata]
          Length = 448

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 24/57 (42%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +  +    + + GQ ++ + +       +   +  +  D
Sbjct: 22 IAFSGGLDTSAALLWMKQKGAQPYAYTANLGQPDEADYDEIPRKAMEYGAIKARLID 78


>gi|257452082|ref|ZP_05617381.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
          [Fusobacterium sp. 3_1_5R]
          Length = 333

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 28/83 (33%), Gaps = 9/83 (10%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL----SFDYGQRNKVELECRLCVRKKI 60
          +     AL LFSGG DS+  +    ++   V  L     F  G       E    + K++
Sbjct: 1  MVAKIKALALFSGGLDSALAIKVVQEQGIEVIALNFVSHFFGG-----VNEKAEYMAKQL 55

Query: 61 VELMPKWKDSLGEDHILPLAILG 83
             +           ++   + G
Sbjct: 56 GIQLEYIHFEKRHMEVVKDPVYG 78


>gi|217032089|ref|ZP_03437589.1| hypothetical protein HPB128_16g49 [Helicobacter pylori B128]
 gi|216946237|gb|EEC24845.1| hypothetical protein HPB128_16g49 [Helicobacter pylori B128]
          Length = 342

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 48/176 (27%), Gaps = 15/176 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS       ++   +  +         ++L          ++   K  +
Sbjct: 2   KIAVLLSGGVDSSYSAYSLKEQGHELVGIY--------LKLHASEKKHDLYIKNAQKACE 53

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG    L +        +++        ++   PN       ++    A   A +LG  
Sbjct: 54  FLGIP--LEVLDFQKDFKNAVYDEFISAYEEGQTPNPCALCNPLMKFGLALDHALQLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            I  G                    T         L  E    +  PL  L K + 
Sbjct: 112 KIATGHYARVKEIDKVSYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDI 167


>gi|154503546|ref|ZP_02040606.1| hypothetical protein RUMGNA_01370 [Ruminococcus gnavus ATCC 29149]
 gi|153795646|gb|EDN78066.1| hypothetical protein RUMGNA_01370 [Ruminococcus gnavus ATCC 29149]
          Length = 515

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 50/188 (26%), Gaps = 22/188 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS           +++  +  D+G   K E +    +            
Sbjct: 218 KVLCALSGGVDSSVAAVMLSKAIGNQLTCVFVDHGLLRKNEGDEVEAI------------ 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G +    L  +   +     + +A   +               F+      A ++G 
Sbjct: 266 --FGPEGDYDLNFIRVNAQQRFYEKLAGVTEPEQKRKII----GEEFIRVFEEEAKKIGT 319

Query: 129 TNIV---IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            + +       +   SG                         +  PL  L K E  K   
Sbjct: 320 VDFLVQGTIYPDVVESGLGGESAVIKSHHNVGGLPDYVDFKEIIEPLRDLFKDEVRKAGL 379

Query: 186 DIGGQDLV 193
           ++G  + +
Sbjct: 380 ELGLPERL 387


>gi|145300032|ref|YP_001142873.1| tRNA(Ile)-lysidine synthase [Aeromonas salmonicida subsp.
          salmonicida A449]
 gi|142852804|gb|ABO91125.1| tRNA(Ile)-lysidine synthase [Aeromonas salmonicida subsp.
          salmonicida A449]
          Length = 456

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 6/56 (10%)

Query: 12 LLLFSGGQDSSTCLSW----ALDRFDRVETLSFDYGQRNKVELECRLC--VRKKIV 61
          L+ FSGG DS+  L+     A +    +  L   +G     +     C  V +++ 
Sbjct: 23 LVAFSGGLDSTVLLALAAQFAREHGLALRALHVHHGLSPHADEWVAHCEAVCQQLA 78


>gi|332296116|ref|YP_004438039.1| GMP synthase (glutamine-hydrolyzing) [Thermodesulfobium narugense
           DSM 14796]
 gi|332179219|gb|AEE14908.1| GMP synthase (glutamine-hydrolyzing) [Thermodesulfobium narugense
           DSM 14796]
          Length = 515

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 51/190 (26%), Gaps = 17/190 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +     A+   SGG DSS           D +     D G   K E        + I  +
Sbjct: 214 MVGDQKAICALSGGVDSSAAAVLVHKAIGDNLTCFYVDTGLMRKNEN-------RDIKRI 266

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
             +      +        L  +   S  +     I +          R     +      
Sbjct: 267 FDEEFHLNVKFIDARERFLSKLEGVSDPERKRKIIGEEF-------IRTFEDAIKGLGDF 319

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             L    +   V E+  S         I++      L  +    +  P   L K E   L
Sbjct: 320 DWLVQGTLYPDVIESAVSVGGKA--VRIKSHHNVAGLPEDMKFKLLEPFRNLFKDEVRNL 377

Query: 184 AQDIGGQDLV 193
           A ++G  + +
Sbjct: 378 ALELGLPEEI 387


>gi|284164051|ref|YP_003402330.1| GMP synthase, large subunit [Haloterrigena turkmenica DSM 5511]
 gi|284013706|gb|ADB59657.1| GMP synthase, large subunit [Haloterrigena turkmenica DSM 5511]
          Length = 305

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 57/189 (30%), Gaps = 28/189 (14%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            +A++  SGG DSS   + A +   DR+  +  D G   K E            + + + 
Sbjct: 22  ENAVIALSGGVDSSVAAALAYEAIGDRLTPVYVDTGLMRKGET-----------DQIRET 70

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D +    I+        + + +T     +                 F+      A    
Sbjct: 71  FDYMESLRIVDAKDRFLEALAGVTDPEEKR-----------EIIGEQFIREFEREAKDAD 119

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-VHTPLMWLKKYETWKLAQD 186
              +V                  I++      L        +  P+  L K E  ++A+ 
Sbjct: 120 ADYLVQ----GTIYPDRIESEGGIKSHHNVGGLPEVVDFEGIVEPVRDLYKDEVREVARH 175

Query: 187 IGGQDLVNL 195
           +G  ++V  
Sbjct: 176 LGLDEIVAE 184


>gi|184200328|ref|YP_001854535.1| GMP synthase [Kocuria rhizophila DC2201]
 gi|183580558|dbj|BAG29029.1| GMP synthetase [Kocuria rhizophila DC2201]
          Length = 532

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 51/185 (27%), Gaps = 11/185 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            AL   SGG DS+   +       DR+  +  D+G   + E+E                 
Sbjct: 229 KALCGLSGGVDSAVAAALVQRAIGDRLTCVLVDHGLMRQDEVEQVEK---------DYVA 279

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  + H+         +   +T     +                  L   A     +  
Sbjct: 280 ATGVKLHVAREQDRFLEALKGVTDPETKRKAIGREFIRAFEAAEEKVLRAEAQDGEPVR- 338

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +    +  PL  L K E   + +++G
Sbjct: 339 FLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPEDLQFELVEPLRALFKDEVRAVGRELG 398

Query: 189 GQDLV 193
             + +
Sbjct: 399 LPENI 403


>gi|116250083|ref|YP_765921.1| GMP synthase [Rhizobium leguminosarum bv. viciae 3841]
 gi|226739710|sp|Q1MMJ7|GUAA_RHIL3 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|115254731|emb|CAK05805.1| putative GMP synthase [glutamine hydrolysing] [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 520

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 55/184 (29%), Gaps = 17/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS       +   D++  +  D+G      L  +      +      +
Sbjct: 223 KRVICALSGGVDSSVAALLIHEAVGDQLTCILVDHG------LMRKDEAAGVVAMFREHY 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              L          +G++   S  +     I    +       R           A  LG
Sbjct: 277 NLHLLHVDAAD-RFIGELEGVSDPETKRKIIGRLFIETFEEEARK-------LGGADFLG 328

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   V E+    +      TI++      L     + +  PL  L K E   L +++
Sbjct: 329 QGTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMKMQLVEPLRELFKDEVRALGREL 386

Query: 188 GGQD 191
           G  D
Sbjct: 387 GLPD 390


>gi|312978380|ref|ZP_07790122.1| GMP synthase [Lactobacillus crispatus CTV-05]
 gi|310894723|gb|EFQ43795.1| GMP synthase [Lactobacillus crispatus CTV-05]
          Length = 488

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 60/204 (29%), Gaps = 30/204 (14%)

Query: 1   MNDIIKKA----------PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVE 49
           MND I                +L  SGG DSS   +       D++  +  D+G   K E
Sbjct: 176 MNDFIDMKVDDIRKEVGDKKVILGLSGGVDSSVTATLLHKAIGDQLTAIFVDHGMLRKDE 235

Query: 50  LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
                 V + + + +      +       L  L  ++     + +  K            
Sbjct: 236 G---NQVMQALNKDLGVNIIRVNAQKRF-LDKLKGVTDPEKKRKIIGKEFIEVFNEEAKK 291

Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
            +++ FL         +                       TI++      L  + H  + 
Sbjct: 292 LKDVDFLAQGTLYTDVIE---------------SGTNTAQTIKSHHNVGGLPKDMHFKLI 336

Query: 170 TPLMWLKKYETWKLAQDIGGQDLV 193
            PL  L K E  +L + +G    +
Sbjct: 337 EPLRKLFKDEVRELGEKLGIPHDL 360


>gi|295692103|ref|YP_003600713.1| gmp synthase (glutamine-hydrolyzing) [Lactobacillus crispatus ST1]
 gi|295030209|emb|CBL49688.1| GMP synthase (Glutamine-hydrolyzing) [Lactobacillus crispatus ST1]
          Length = 516

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 60/204 (29%), Gaps = 30/204 (14%)

Query: 1   MNDIIKKA----------PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVE 49
           MND I                +L  SGG DSS   +       D++  +  D+G   K E
Sbjct: 204 MNDFIDMKVDDIRKEVGDKKVILGLSGGVDSSVTATLLHKAIGDQLTAIFVDHGMLRKDE 263

Query: 50  LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
                 V + + + +      +       L  L  ++     + +  K            
Sbjct: 264 G---NQVMQALNKDLGVNIIRVNAQKRF-LDKLKGVTDPEKKRKIIGKEFIEVFNEEAKK 319

Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
            +++ FL         +                       TI++      L  + H  + 
Sbjct: 320 LKDVDFLAQGTLYTDVIE---------------SGTNTAQTIKSHHNVGGLPKDMHFKLI 364

Query: 170 TPLMWLKKYETWKLAQDIGGQDLV 193
            PL  L K E  +L + +G    +
Sbjct: 365 EPLRKLFKDEVRELGEKLGIPHDL 388


>gi|300781387|ref|ZP_07091241.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Corynebacterium genitalium ATCC 33030]
 gi|300533094|gb|EFK54155.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Corynebacterium genitalium ATCC 33030]
          Length = 361

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 43/177 (24%), Gaps = 5/177 (2%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK-KIVELMPKWKDSLGE 73
            SGG DSS   +  +D    V  +     +      E        +      +  D LG 
Sbjct: 1   MSGGVDSSVAAARLVDAGHDVVGVHLALSKDAHQTRESARGCCSLEDSADARRVCDKLGI 60

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
              +      D     +  +          PN  +     I        A +LG   I  
Sbjct: 61  PFYVW--DFSDRFKEDVIDDFVDSYARGETPNPCLRCNEKIKFAALLERAVQLGFDAIAT 118

Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK--KYETWKLAQDIG 188
           G            R    +  ++ +   M                K +  + A   G
Sbjct: 119 GHYALIDGAGNLRRSIDPQKDQSYVLGVMTRDELDRCIFPVGDTEKPQIREEAAAYG 175


>gi|256844375|ref|ZP_05549861.1| GMP synthase/glutamine amidotransferase [Lactobacillus crispatus
           125-2-CHN]
 gi|293381957|ref|ZP_06627919.1| GMP synthase (glutamine-hydrolyzing) [Lactobacillus crispatus
           214-1]
 gi|256613453|gb|EEU18656.1| GMP synthase/glutamine amidotransferase [Lactobacillus crispatus
           125-2-CHN]
 gi|290921464|gb|EFD98504.1| GMP synthase (glutamine-hydrolyzing) [Lactobacillus crispatus
           214-1]
          Length = 516

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 60/204 (29%), Gaps = 30/204 (14%)

Query: 1   MNDIIKKA----------PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVE 49
           MND I                +L  SGG DSS   +       D++  +  D+G   K E
Sbjct: 204 MNDFIDMKVDDIRKEVGDKKVILGLSGGVDSSVTATLLHKAIGDQLTAIFVDHGMLRKDE 263

Query: 50  LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
                 V + + + +      +       L  L  ++     + +  K            
Sbjct: 264 G---NQVMQALNKDLGVNIIRVNAQKRF-LDKLKGVTDPEKKRKIIGKEFIEVFNEEAKK 319

Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
            +++ FL         +                       TI++      L  + H  + 
Sbjct: 320 LKDVDFLAQGTLYTDVIE---------------SGTNTAQTIKSHHNVGGLPKDMHFKLI 364

Query: 170 TPLMWLKKYETWKLAQDIGGQDLV 193
            PL  L K E  +L + +G    +
Sbjct: 365 EPLRKLFKDEVRELGEKLGIPHDL 388


>gi|227877995|ref|ZP_03995997.1| GMP synthase (glutamine-hydrolyzing) [Lactobacillus crispatus
           JV-V01]
 gi|256849225|ref|ZP_05554658.1| GMP synthase/glutamine amidotransferase [Lactobacillus crispatus
           MV-1A-US]
 gi|262047241|ref|ZP_06020199.1| GMP synthase/glutamine amidotransferase [Lactobacillus crispatus
           MV-3A-US]
 gi|227862416|gb|EEJ69933.1| GMP synthase (glutamine-hydrolyzing) [Lactobacillus crispatus
           JV-V01]
 gi|256714001|gb|EEU28989.1| GMP synthase/glutamine amidotransferase [Lactobacillus crispatus
           MV-1A-US]
 gi|260572486|gb|EEX29048.1| GMP synthase/glutamine amidotransferase [Lactobacillus crispatus
           MV-3A-US]
          Length = 516

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 60/204 (29%), Gaps = 30/204 (14%)

Query: 1   MNDIIKKA----------PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVE 49
           MND I                +L  SGG DSS   +       D++  +  D+G   K E
Sbjct: 204 MNDFIDMKVDDIRKEVGDKKVILGLSGGVDSSVTATLLHKAIGDQLTAIFVDHGMLRKDE 263

Query: 50  LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
                 V + + + +      +       L  L  ++     + +  K            
Sbjct: 264 G---NQVMQALNKDLGVNIIRVNAQKRF-LDKLKGVTDPEKKRKIIGKEFIEVFNEEAKK 319

Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
            +++ FL         +                       TI++      L  + H  + 
Sbjct: 320 LKDVDFLAQGTLYTDVIE---------------SGTNTAQTIKSHHNVGGLPKDMHFKLI 364

Query: 170 TPLMWLKKYETWKLAQDIGGQDLV 193
            PL  L K E  +L + +G    +
Sbjct: 365 EPLRKLFKDEVRELGEKLGIPHDL 388


>gi|295660644|ref|XP_002790878.1| argininosuccinate synthase [Paracoccidioides brasiliensis Pb01]
 gi|226281130|gb|EEH36696.1| argininosuccinate synthase [Paracoccidioides brasiliensis Pb01]
          Length = 413

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 3/75 (4%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          +       L +SGG D+S  L+W +++   V     D GQ    E       +  ++   
Sbjct: 1  MPAKEKVCLAYSGGLDTSCILAWLIEQGYDVVCFLADVGQ---AEDFKEAERKALLIGAQ 57

Query: 65 PKWKDSLGEDHILPL 79
                L  + +  L
Sbjct: 58 KLVVADLKREFVEDL 72


>gi|261344719|ref|ZP_05972363.1| tRNA(Ile)-lysidine synthetase [Providencia rustigianii DSM 4541]
 gi|282567161|gb|EFB72696.1| tRNA(Ile)-lysidine synthetase [Providencia rustigianii DSM 4541]
          Length = 453

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 34/126 (26%), Gaps = 11/126 (8%)

Query: 8   APSALLLFSGGQDSST---CLSWALDRFD---RVETLSFDYGQRNKVELECRLCVRKKIV 61
               L+ FSGG DS+     L           +V  +   +G                  
Sbjct: 19  HRKILVGFSGGIDSTVLLHALYQLKQSHFPSLQVRAIHVHHG-----LNMRADKWEMHCA 73

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           EL  +W       H+   A    +  ++          +       V  +++        
Sbjct: 74  ELCEQWNIPFVCHHVTVDASNNGVEAAARDARYQAYRDELLQNEIIVTAQHLDDQAETFL 133

Query: 122 LAYRLG 127
           LA + G
Sbjct: 134 LALKRG 139


>gi|167763337|ref|ZP_02435464.1| hypothetical protein BACSTE_01711 [Bacteroides stercoris ATCC
           43183]
 gi|167698631|gb|EDS15210.1| hypothetical protein BACSTE_01711 [Bacteroides stercoris ATCC
           43183]
          Length = 365

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 49/177 (27%), Gaps = 7/177 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +L SGG DSS  +    ++  R        G+ +   ++C     + +       +    
Sbjct: 5   VLLSGGVDSSVVVHLLCEQGHRPSLFYIKIGKDDAEYMDCS--AEEDLEMASAVARRYGL 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
              ++ L    +   +     +    +        +  + I F  F   +      T   
Sbjct: 63  SLEVVDLH--REYWDNVAAYAIEKVSRGFTPNPDVMCNKLIKFGCFEQRVGRHFDFTATG 120

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLAQD 186
                   +G            +    L    ++ V     PL  L K E   +A  
Sbjct: 121 HYATTVLQNGKTWLGTALDPVKDQTDFLAQIDYLQVSKLMFPLGGLMKQEVRDIALK 177


>gi|124027202|ref|YP_001012522.1| argininosuccinate synthase [Hyperthermus butylicus DSM 5456]
 gi|166219971|sp|A2BJL6|ASSY_HYPBU RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|123977896|gb|ABM80177.1| Argininosuccinate synthase [Hyperthermus butylicus DSM 5456]
          Length = 396

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 22/56 (39%), Gaps = 2/56 (3%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
            +L +SGG D+S  L    ++   V T++   GQ   +E         K+     
Sbjct: 2  KVVLAYSGGLDTSAILVLLREQGHEVVTVTVSVGQEEDLEEVEER--AYKLGASKH 55


>gi|50915203|ref|YP_061175.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pyogenes
           MGAS10394]
 gi|94995352|ref|YP_603450.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pyogenes
           MGAS10750]
 gi|50904277|gb|AAT87992.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pyogenes MGAS10394]
 gi|94548860|gb|ABF38906.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pyogenes MGAS10750]
          Length = 379

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 50/192 (26%), Gaps = 12/192 (6%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +   +    ++  SGG DSS       ++   V  +             C     +   +
Sbjct: 7   MTDNSKIRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDYKD 64

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +           + +            + +    + +    PN  V     I        
Sbjct: 65  VAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDY 121

Query: 123 AYRLGITNIVIGVCET----DYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLK 176
           A  LG   +  G        +       R       +T     L  E       PL  L+
Sbjct: 122 AMTLGADYVATGHYAQVKRDENGTVHMLRGADNGKDQTYFLSQLSQEQLQKTLFPLGHLQ 181

Query: 177 KYETWKLAQDIG 188
           K E  ++A+  G
Sbjct: 182 KSEVREIAERAG 193


>gi|332686364|ref|YP_004456138.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Melissococcus plutonius ATCC 35311]
 gi|332370373|dbj|BAK21329.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Melissococcus plutonius ATCC 35311]
          Length = 373

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/141 (12%), Positives = 37/141 (26%), Gaps = 6/141 (4%)

Query: 5   IKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +K +    ++  SGG DSS       ++   V  +         ++        +   ++
Sbjct: 1   MKNSQIRVVVGMSGGVDSSVTALLLKEQGYDVVGIFMK--NWEDIDENGVCTATEDYKDV 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      + +            + +    + ++   PN  V     I        A
Sbjct: 59  AKVADQIGIPYYSVN---FEKEYWDHVFEYFLSEYRNGRTPNPDVMCNKEIKFKAFLNYA 115

Query: 124 YRLGITNIVIGVCETDYSGYP 144
            +LG   I  G          
Sbjct: 116 MQLGADYIATGHYAQIERTED 136


>gi|310828741|ref|YP_003961098.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Eubacterium limosum KIST612]
 gi|308740475|gb|ADO38135.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Eubacterium limosum KIST612]
          Length = 359

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/182 (11%), Positives = 45/182 (24%), Gaps = 9/182 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS        +   V  +        + + +      +   ++    + 
Sbjct: 2   KIVVGMSGGVDSSVAALLLKQQGYDVIGVFMK--NWEEKDEDGVCTATEDYEDVQRVCET 59

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                + +      +         +    +        +  + I F  F       +G  
Sbjct: 60  IDIPYYTVNFT--REYYDHVFAYFLDEYKKGRTPNPDVLCNKEIKFKRFLDYALGVVGGD 117

Query: 130 NIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            +  G            R                 LG      V  P+  L K E  ++A
Sbjct: 118 VLATGHYAQKDVHEGKFRLIRAFDHNKDQTYFLCQLGQHQLENVMFPIGHLDKKEVREIA 177

Query: 185 QD 186
           + 
Sbjct: 178 EK 179


>gi|306826439|ref|ZP_07459751.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pyogenes ATCC 10782]
 gi|304431369|gb|EFM34366.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pyogenes ATCC 10782]
          Length = 378

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 50/192 (26%), Gaps = 12/192 (6%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +   +    ++  SGG DSS       ++   V  +             C     +   +
Sbjct: 6   MTDNSKIRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDYKD 63

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +           + +            + +    + +    PN  V     I        
Sbjct: 64  VAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDY 120

Query: 123 AYRLGITNIVIGVCET----DYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLK 176
           A  LG   +  G        +       R       +T     L  E       PL  L+
Sbjct: 121 AMTLGADYVATGHYAQVKRDENGTVHMLRGADNGKDQTYFLSQLSQEQLQKTLFPLGHLQ 180

Query: 177 KYETWKLAQDIG 188
           K E  ++A+  G
Sbjct: 181 KSEVREIAERAG 192


>gi|238760683|ref|ZP_04621806.1| Argininosuccinate synthase [Yersinia aldovae ATCC 35236]
 gi|238701100|gb|EEP93694.1| Argininosuccinate synthase [Yersinia aldovae ATCC 35236]
          Length = 454

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 3/72 (4%)

Query: 1  MNDIIKK---APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I+K         + FSGG D+S  L W   +       + + GQ ++ + +      
Sbjct: 1  MTTILKHLPINQRVGIAFSGGLDTSAALLWMKQKGAVPYAYTANLGQPDEEDYDAIPRKA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 MEYGAEKARLID 72


>gi|218885155|ref|YP_002434476.1| argininosuccinate synthase [Desulfovibrio vulgaris str. 'Miyazaki
          F']
 gi|226729177|sp|B8DN64|ASSY_DESVM RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|218756109|gb|ACL07008.1| Argininosuccinate synthase [Desulfovibrio vulgaris str. 'Miyazaki
          F']
          Length = 401

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 4  IIKKAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQ 44
          + K     +L +SGG D+S  L   A+     V TL+ D GQ
Sbjct: 1  MAKAIKKVVLAYSGGLDTSVILKWIAVTYGCEVVTLTADLGQ 42


>gi|209521300|ref|ZP_03270018.1| Argininosuccinate synthase [Burkholderia sp. H160]
 gi|209498275|gb|EDZ98412.1| Argininosuccinate synthase [Burkholderia sp. H160]
          Length = 444

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 3/72 (4%)

Query: 1  MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M+ I++  P      + FSGG D+S  L W   +       + + GQ ++ + +      
Sbjct: 1  MSTILESLPIGQKVGIAFSGGLDTSAALHWMRKKGAVPYAYTANLGQPDEDDYDSIPRRA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 TQYGAEGARLID 72


>gi|205829103|sp|Q1J988|MNMA_STRPB RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205829104|sp|Q1JJD5|MNMA_STRPC RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 373

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 50/192 (26%), Gaps = 12/192 (6%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +   +    ++  SGG DSS       ++   V  +             C     +   +
Sbjct: 1   MTDNSKIRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDYKD 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +           + +            + +    + +    PN  V     I        
Sbjct: 59  VAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDY 115

Query: 123 AYRLGITNIVIGVCET----DYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLK 176
           A  LG   +  G        +       R       +T     L  E       PL  L+
Sbjct: 116 AMTLGADYVATGHYAQVKRDENGTVHMLRGADNGKDQTYFLSQLSQEQLQKTLFPLGHLQ 175

Query: 177 KYETWKLAQDIG 188
           K E  ++A+  G
Sbjct: 176 KSEVREIAERAG 187


>gi|160945133|ref|ZP_02092359.1| hypothetical protein FAEPRAM212_02652 [Faecalibacterium prausnitzii
           M21/2]
 gi|158442864|gb|EDP19869.1| hypothetical protein FAEPRAM212_02652 [Faecalibacterium prausnitzii
           M21/2]
          Length = 521

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 44/185 (23%), Gaps = 14/185 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS   +        ++  +  D+G   K E E          E+   + 
Sbjct: 222 KVLCALSGGVDSSVLAAMLAKAIGKQLTCVFVDHGLLRKNEKE----------EVCSVFG 271

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   +    +              + +           R              L  
Sbjct: 272 PGNANGFDINFICVDARDRYFSKLKGVTEPERKRKIIGEEFIRVFEEEAKKIGKVDFLAQ 331

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I   V E   SG                         +  PL  L K E  +  +++G
Sbjct: 332 GTIYPDVVE---SGLGGESTVIKSHHNVGGLPDTVDFKELVEPLRNLFKDEVRQAGRELG 388

Query: 189 GQDLV 193
             + +
Sbjct: 389 LPEYL 393


>gi|21227320|ref|NP_633242.1| GMP synthase subunit B [Methanosarcina mazei Go1]
 gi|44887898|sp|Q8PXK0|GUAAB_METMA RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
          AltName: Full=GMP synthetase
 gi|20905674|gb|AAM30914.1| GMP synthase [Methanosarcina mazei Go1]
          Length = 305

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
          K   A++  SGG DSS C   A     DR++ +  D G   K E E    +   + 
Sbjct: 20 KDGKAIIALSGGVDSSVCAELAYRAIGDRLQPIYIDTGLMRKGETERIRHIFSHMN 75


>gi|85714484|ref|ZP_01045472.1| argininosuccinate synthase [Nitrobacter sp. Nb-311A]
 gi|85698931|gb|EAQ36800.1| argininosuccinate synthase [Nitrobacter sp. Nb-311A]
          Length = 409

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 4/80 (5%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCV---RKK 59
          + KK    +L +SGG D+S  L W    +D  V T + D GQ  ++E   +       K 
Sbjct: 1  MSKKVKKVVLAYSGGLDTSIILKWLQTTYDAEVVTFTADLGQGEELEPARKKAQLLGIKD 60

Query: 60 IVELMPKWKDSLGEDHILPL 79
              +   ++    D++ P+
Sbjct: 61 ANIFIEDLREEFVRDYVFPM 80


>gi|329769467|ref|ZP_08260878.1| GMP synthase [Gemella sanguinis M325]
 gi|328838798|gb|EGF88394.1| GMP synthase [Gemella sanguinis M325]
          Length = 514

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 55/184 (29%), Gaps = 16/184 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS   +       D++  +  D+G   K E E  +    K +E    
Sbjct: 215 NQKVLCALSGGVDSSVVAALLDKAIGDQLICMFIDHGLLRKGEAEGVMNTFSKEIEGGFN 274

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 +     L  L  +S     + +                 N    VF    A   
Sbjct: 275 MNLIKIDAKERFLGKLKGVSDPEKKRKI---------------IGNEFVYVFDEECAKLH 319

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +  +  G   TD          TI++      L  +   ++  PL  L K E   L + 
Sbjct: 320 DVPFLAQGTLYTDVIESGTKNAQTIKSHHNVGGLPEDMRFSLIEPLNTLFKDEVRALGEA 379

Query: 187 IGGQ 190
           +G  
Sbjct: 380 LGLP 383


>gi|288928497|ref|ZP_06422344.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella sp. oral taxon 317 str. F0108]
 gi|288331331|gb|EFC69915.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella sp. oral taxon 317 str. F0108]
          Length = 353

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 42/181 (23%), Gaps = 7/181 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
               +L SGG DSS  +          +      G     E +C     + +       K
Sbjct: 4   KKIAVLLSGGVDSSVVVYEFNRLGLHPDCFYIKIGPEETEEWDCASE--EDLEMATAVAK 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               +  ++      +         +             +  R I F  F     +   +
Sbjct: 62  RFGCKLEVVD--CHKEYWEQVTRYTMDKVKAGFTPNPDVMCNRLIKFGAFHEKRGHEYDL 119

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH---TPLMWLKKYETWKLAQ 185
                        G            +    L       +     P+   +K E  ++A+
Sbjct: 120 IATGHYAQTEWIDGKKWLVTSPDPVKDQTDFLAQIYDWQLRKALFPIGHYQKGEVREIAE 179

Query: 186 D 186
            
Sbjct: 180 R 180


>gi|254521475|ref|ZP_05133530.1| argininosuccinate synthase [Stenotrophomonas sp. SKA14]
 gi|219719066|gb|EED37591.1| argininosuccinate synthase [Stenotrophomonas sp. SKA14]
          Length = 403

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 1/65 (1%)

Query: 3  DIIKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
          D+   +   ++L FSGG D+S C+ +  +R   V T+  D G  +  E +        + 
Sbjct: 2  DLTPMSNKDVVLAFSGGLDTSFCVPYLQERGYNVHTVFADTGGVDDEERDFIEKRAAALG 61

Query: 62 ELMPK 66
               
Sbjct: 62 VTSHV 66


>gi|160894878|ref|ZP_02075652.1| hypothetical protein CLOL250_02428 [Clostridium sp. L2-50]
 gi|156863309|gb|EDO56740.1| hypothetical protein CLOL250_02428 [Clostridium sp. L2-50]
          Length = 587

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 55/189 (29%), Gaps = 21/189 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS            ++  +  D G   K E +    V          
Sbjct: 289 NGKVLCALSGGVDSSVAAVLLSKAVGKQLTCVFVDQGLLRKNEGDEVEAV---------- 338

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G D    L  +   +     + +A  ++               F+      A ++
Sbjct: 339 ----FGPDGPYDLNFIRVNAQDRFYQKLAGVVEPEAKRKII----GEEFIRVFEEEAKKI 390

Query: 127 GI-TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLA 184
           G    +V G    D       +  TI++      L        +  PL  L K E  K  
Sbjct: 391 GAVDFLVQGTIYPDVIESGLGKSATIKSHHNVGGLPDYVDFKEIVEPLRLLFKDEVRKAG 450

Query: 185 QDIGGQDLV 193
           +++G  + +
Sbjct: 451 RELGIPEYL 459


>gi|52550452|gb|AAU84301.1| argininosuccinate synthase [uncultured archaeon GZfos9D1]
          Length = 388

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/201 (10%), Positives = 50/201 (24%), Gaps = 8/201 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +L +SGG D+S C+    +   +D V  ++ D GQ  + +++       K+ +   +
Sbjct: 2   KKVVLAYSGGLDTSVCIPLLKEHYGYDNVIAVTVDVGQ-PEDDIKEAKERGAKLCDSYRE 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                         ++    +           +     +     R       A     + 
Sbjct: 61  IDAKEEFVRDYIFPLIKANGNYEGYVLGTAIARPLIAKHVVEVAREENADAVAHGCTGKG 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL--- 183
                   V  T          +             E  + +     W      W     
Sbjct: 121 NDQLRFDAVFRTTDLDVVAPMRELSLTRAEERKYAAEHGILLKPEHRWSVDENIWSRSIE 180

Query: 184 AQDIGGQDLV--NLILEESHT 202
             ++          I + + +
Sbjct: 181 GAELEDPSFSPPEEIFQWTVS 201


>gi|51246817|ref|YP_066701.1| hypothetical protein DP2965 [Desulfotalea psychrophila LSv54]
 gi|50877854|emb|CAG37694.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
          Length = 360

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 26/74 (35%), Gaps = 7/74 (9%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           AL LFSGG DS       +++   +  + F       V       + + +     + K 
Sbjct: 5  KALSLFSGGLDSILAARLIMEQGIELIAVQF-------VTPFFSYEILQDVEAYQAEVKR 57

Query: 70 SLGEDHILPLAILG 83
            G + ++     G
Sbjct: 58 KYGINVLVENISPG 71


>gi|198420645|ref|XP_002127818.1| PREDICTED: similar to arginosuccinate synthetase [Ciona
          intestinalis]
          Length = 407

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 25/53 (47%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          +    + +L +SGG D+S  L W +++  +V     + GQ    E+     +R
Sbjct: 1  MASKETVVLAYSGGLDTSCILVWLIEQGYKVIGFLVNVGQNEDFEVAREKGLR 53


>gi|317012818|gb|ADU83426.1| GMP synthase [Helicobacter pylori Lithuania75]
          Length = 508

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 49/180 (27%), Gaps = 16/180 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DS+   +       D +  +  D+G   K E E    + K +     +  
Sbjct: 211 KVLCAVSGGVDSTVVATLLHRAIKDNLIAVFVDHGLLRKNEKERVQAMFKDL-----QIP 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  +   + L+ L  +       +     +                          L  
Sbjct: 266 LNTIDAKGIFLSKLKGV-------SEPEWKRKIIGETFIEVFEKEAKKHHLKGKIEFLAQ 318

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E   S         I+       L       +  PL  L K E   L +++G
Sbjct: 319 GTLYPDVIE---SVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEVRLLGKELG 375


>gi|316971871|gb|EFV55594.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Trichinella spiralis]
          Length = 717

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 37/137 (27%), Gaps = 4/137 (2%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              S     SGG DS+        R   V  +             C  C  K +++    
Sbjct: 1   MFKSVACAISGGIDSAVTAHLLKARGFDVIGVFMKNWDLIDEFGYC--CSDKDLLDAQKV 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +      H +    + +      T  +   +         +  R I F +F +   + L
Sbjct: 59  CRHLKIPFHEVH--FINEYWDDVFTNLLDGYVIGKTPNPDILCNRLIKFDLFFSYCMHTL 116

Query: 127 GITNIVIGVCETDYSGY 143
            +  +  G       G 
Sbjct: 117 KVDAVATGHYARSSFGR 133


>gi|171769481|sp|A7GYN4|ASSY_CAMC5 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
          Length = 406

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 4/80 (5%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI-- 60
          + K     +L +SGG D+S  L W  D +   V T + D GQ  ++E   +  +   +  
Sbjct: 1  MKKDVKKVVLAYSGGLDTSIILKWLQDEYKCEVVTFTADIGQGEELEPARKKALALGVKP 60

Query: 61 -VELMPKWKDSLGEDHILPL 79
              +   ++    D++ P+
Sbjct: 61 ENIFIEDLREEFVRDYVFPM 80


>gi|160883313|ref|ZP_02064316.1| hypothetical protein BACOVA_01282 [Bacteroides ovatus ATCC 8483]
 gi|156111297|gb|EDO13042.1| hypothetical protein BACOVA_01282 [Bacteroides ovatus ATCC 8483]
          Length = 355

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 48/181 (26%), Gaps = 7/181 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
            L SGG DSS  +    ++  +        G      ++C     + I       +    
Sbjct: 5   ALLSGGVDSSVVVHLLCEQGYKPTLFYIKIGMDGAEYMDCS--AEEDIELSTATARKYGL 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
              ++ L    +   +     +    Q        +  + I F  F   +      T   
Sbjct: 63  SLEVVDLH--QEYWENVAAYAIDKIRQGLTPNPDVMCNKLIKFGCFEQRVGKDFDFTATG 120

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLAQDIGG 189
                   +G            +    L    ++ V     P+  L K E  ++A   G 
Sbjct: 121 HYATTLQRNGKTWLGTAKDLVKDQTDFLAQIDYLQVSKLMFPIGGLMKQEVREIANKAGL 180

Query: 190 Q 190
            
Sbjct: 181 P 181


>gi|119575283|gb|EAW54888.1| hCG40893, isoform CRA_c [Homo sapiens]
          Length = 403

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 2/61 (3%)

Query: 2  NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
          +D +    S +L +SG  D+S  L W  ++   V     + GQ+   E         K  
Sbjct: 5  SDAMSTKGSVVLAYSGSLDTSCTLLWLKEQGYDVIAYLANIGQKEDFEE--ARKNALKFG 62

Query: 62 E 62
           
Sbjct: 63 A 63


>gi|118470807|ref|YP_885988.1| GMP synthase [Mycobacterium smegmatis str. MC2 155]
 gi|118172094|gb|ABK72990.1| glutamine-hydrolyzing GMP synthase [Mycobacterium smegmatis str.
           MC2 155]
          Length = 520

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/185 (11%), Positives = 49/185 (26%), Gaps = 13/185 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+   +       DR+  +  D+G      L       +   + +    
Sbjct: 219 RAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHG------LLRAGERAQVQRDFVAATG 272

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             L    +    +      ++      +  ++            +             G 
Sbjct: 273 AKLVTVDVADRFLEALTGVTNPEGKRKIIGREFIRAFEGAVRDLVEDEGSGDIDFLVQGT 332

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
               +                 I++      L  +    +  PL  L K E   + +++G
Sbjct: 333 LYPDVVESGGGSGTA------NIKSHHNVGGLPDDLKFKLVEPLRLLFKDEVRAVGRELG 386

Query: 189 GQDLV 193
             + +
Sbjct: 387 LPEEI 391


>gi|157165398|ref|YP_001466810.1| argininosuccinate synthase [Campylobacter concisus 13826]
 gi|166219956|sp|A7ZDF2|ASSY_CAMC1 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|112801272|gb|EAT98616.1| argininosuccinate synthase [Campylobacter concisus 13826]
          Length = 407

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 4/80 (5%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI-- 60
          + K     +L +SGG D+S  L W  D +   V T + D GQ  ++E   +  +   +  
Sbjct: 1  MKKDVKKVVLAYSGGLDTSIILKWLQDEYKCEVVTFTADIGQGEELEPARKKALALGVKP 60

Query: 61 -VELMPKWKDSLGEDHILPL 79
              +   ++    D++ P+
Sbjct: 61 ENIFIEDLREEFVRDYVFPM 80


>gi|317496474|ref|ZP_07954824.1| GMP synthase domain-containing protein [Gemella moribillum M424]
 gi|316913405|gb|EFV34901.1| GMP synthase domain-containing protein [Gemella moribillum M424]
          Length = 514

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 56/185 (30%), Gaps = 16/185 (8%)

Query: 10  SALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS   +       +++  +  D+G   K E E  +    K ++      
Sbjct: 217 KVLCALSGGVDSSVVAALLDKAIGNQLICMFIDHGLLRKGEAEAVMSTFSKEIDGGFNMN 276

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               +     L  L  +S     + +                 N    VF    A    +
Sbjct: 277 LIKVDAKERFLGKLKGVSDPEKKRKI---------------IGNEFVYVFDEECAKLHDV 321

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G   TD          TI++      L  +   ++  PL  L K E   L + +G
Sbjct: 322 PFLAQGTLYTDVIESGTKNAQTIKSHHNVGGLPEDMRFSLIEPLNTLFKDEVRALGEALG 381

Query: 189 GQDLV 193
               +
Sbjct: 382 LPHEI 386


>gi|313896558|ref|ZP_07830107.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312974743|gb|EFR40209.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 365

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 58/195 (29%), Gaps = 12/195 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK---VELECRLCVR 57
           M  I+ K    ++  SGG DSS   +  L +   V  ++      N+    E +   C  
Sbjct: 1   MERIMGK-ERVVVAMSGGVDSSLAAALLLAQGYDVVGVTMRLSNENRDVDPENDRSCCSL 59

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
             + +            +++   +    S      +  +  +  N             L+
Sbjct: 60  SSVDDARRVADVLGIRHYVMDFTMPFQTSVIDYFLDEYLLGRTPNPCIACNRYIKFEGLL 119

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPL 172
             +     LG +++  G            R                +L  E+   V  PL
Sbjct: 120 HKSA---ELGASHVATGHYARIDFDGGMYRLRKGKDVDKDQSYVLYHLNQETLAHVLLPL 176

Query: 173 MWLKKYETWKLAQDI 187
               K  T ++A++ 
Sbjct: 177 GDFDKGTTRRMAEEY 191


>gi|15675922|ref|NP_270096.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pyogenes M1 GAS]
 gi|71911653|ref|YP_283203.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pyogenes
           MGAS5005]
 gi|14195262|sp|P58075|MNMA_STRP1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|13623161|gb|AAK34817.1| putative tRNA-(5-methylaminomethyl-2-thiouridylate) [Streptococcus
           pyogenes M1 GAS]
 gi|71854435|gb|AAZ52458.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pyogenes MGAS5005]
          Length = 373

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 53/193 (27%), Gaps = 14/193 (7%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIV 61
           +   +    ++  SGG DSS       ++   V  +   ++   ++  +       K + 
Sbjct: 1   MTDNSKIRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVCTATEDYKDVA 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
            +  K                       + +    + +    PN  V     I       
Sbjct: 61  AVADKIGIPYYS------VNFEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLD 114

Query: 122 LAYRLGITNIVIGVCET----DYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWL 175
            A  LG   +  G        +       R       +T     L  E       PL  L
Sbjct: 115 YAMTLGADYVATGHYAQVKRDENGTVHMLRGADNGKDQTYFLSQLSQEQLQKTLFPLGHL 174

Query: 176 KKYETWKLAQDIG 188
           +K E  ++A+  G
Sbjct: 175 QKSEVREIAERAG 187


>gi|317152965|ref|YP_004121013.1| argininosuccinate synthase [Desulfovibrio aespoeensis Aspo-2]
 gi|316943216|gb|ADU62267.1| argininosuccinate synthase [Desulfovibrio aespoeensis Aspo-2]
          Length = 410

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/158 (13%), Positives = 49/158 (31%), Gaps = 9/158 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCV-RKKIVE 62
           + K    +L +SGG D+S  L W  + +   V  ++ D GQ  +++   +  +    +  
Sbjct: 1   MSKLEKVVLAYSGGLDTSIILKWIKNNYDCDVVCMTADLGQGEEMDGIEQKALTTGAVKA 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
            +   ++    D++ P+     +         A+           +  R +         
Sbjct: 61  YVEDLREEFVRDYVFPMFRASALYEGRYLLGTAIARP-------LIAKRMVEIAEVEGAQ 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         + +           A     ++
Sbjct: 114 AVAHGATGKGNDQVRFELATMALNPRLKTIAPWREWDM 151


>gi|291456539|ref|ZP_06595929.1| GMP synthase [Bifidobacterium breve DSM 20213]
 gi|291381816|gb|EFE89334.1| GMP synthase [Bifidobacterium breve DSM 20213]
          Length = 520

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 53/186 (28%), Gaps = 15/186 (8%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+   +       D++  +  D+G   K E+E                  
Sbjct: 218 VICGLSGGVDSAVAAALVHKAIGDQLTCVFVDHGLLRKGEVEQ---------VKHDFVAA 268

Query: 70  SLGEDHILP--LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +  +   +      L  +   S  +     I +  +       R ++    A     +  
Sbjct: 269 TGIKLITVDAADDFLKALKGVSEPERKRKIIGEKFIRTFEKAQRQVLEEAGARGKEVK-- 326

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   +               I++      L  +    +  PL  L K E   +  ++
Sbjct: 327 -FLVQGTLYPDVVESGGGDGAANIKSHHNVGGLPKDIKFQLIEPLRTLFKDEVRAIGTEL 385

Query: 188 GGQDLV 193
           G  D +
Sbjct: 386 GLPDEI 391


>gi|160947468|ref|ZP_02094635.1| hypothetical protein PEPMIC_01402 [Parvimonas micra ATCC 33270]
 gi|158446602|gb|EDP23597.1| hypothetical protein PEPMIC_01402 [Parvimonas micra ATCC 33270]
          Length = 510

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 24/65 (36%), Gaps = 7/65 (10%)

Query: 1   MNDIIKK------APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECR 53
           MN+ I K          LL  SGG DSS C S        ++  +  D G   K E +  
Sbjct: 202 MNEQIDKIKQTVGDKKVLLALSGGVDSSVCASLLSKAIGSQLTCVFVDTGLMRKNEGDEV 261

Query: 54  LCVRK 58
               K
Sbjct: 262 EEAFK 266


>gi|288817514|ref|YP_003431861.1| argininosuccinate synthase [Hydrogenobacter thermophilus TK-6]
 gi|288786913|dbj|BAI68660.1| argininosuccinate synthase [Hydrogenobacter thermophilus TK-6]
          Length = 398

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 4/64 (6%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ----RNKVELECRLCVRKKIVE 62
           +   +L +SGG D+S  + W  ++   V T + D GQ     +  E   +    + IVE
Sbjct: 1  MSKRVILAYSGGLDTSVMVRWLTEKGYEVITYTADVGQGEELSHIPEKARQAGAVEAIVE 60

Query: 63 LMPK 66
           + +
Sbjct: 61 DLKE 64


>gi|116252733|ref|YP_768571.1| argininosuccinate synthase [Rhizobium leguminosarum bv. viciae
          3841]
 gi|119361253|sp|Q1MEZ8|ASSY1_RHIL3 RecName: Full=Argininosuccinate synthase 1; AltName:
          Full=Citrulline--aspartate ligase 1
 gi|115257381|emb|CAK08476.1| putative argininosuccinate synthase [Rhizobium leguminosarum bv.
          viciae 3841]
          Length = 403

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 33/85 (38%), Gaps = 2/85 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
          + K    +L +SGG D+S  L W  +     V T + D GQ  ++E          + ++
Sbjct: 1  MTKIEKIVLSYSGGLDTSIILKWLQETYGCEVVTFTADLGQGEELEPARAKAEMSGVKDI 60

Query: 64 MPK-WKDSLGEDHILPLAILGDISH 87
               ++    D + P+     +  
Sbjct: 61 RIVDLREEFVSDFVFPMLRANALYE 85


>gi|323344915|ref|ZP_08085139.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella oralis ATCC 33269]
 gi|323094185|gb|EFZ36762.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella oralis ATCC 33269]
          Length = 359

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/182 (12%), Positives = 45/182 (24%), Gaps = 7/182 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K     +L SGG DSS  +   +      +      G   + + +C     + +      
Sbjct: 8   KGKKIAVLLSGGVDSSVVVYELVRLGLLPDCFYIKIGPEEQEQWDCSSE--EDLEMATVV 65

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                    I+      +         +             +  R I F  F   + +R 
Sbjct: 66  AARYGCRLEIVD--CHKEYWSEVTRYTMDKVRAGFTPNPDVMCNRLIKFGAFDDKVGHRY 123

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH---TPLMWLKKYETWKL 183
            +             G            +    L    +  +     P+    K E  ++
Sbjct: 124 DLIATGHYAQTEMIGGKKWLVTSPDPVKDQTDFLAQIYNWQLRKALFPIGHYMKDEVREI 183

Query: 184 AQ 185
           A+
Sbjct: 184 AE 185


>gi|289548315|ref|YP_003473303.1| argininosuccinate synthase [Thermocrinis albus DSM 14484]
 gi|289181932|gb|ADC89176.1| argininosuccinate synthase [Thermocrinis albus DSM 14484]
          Length = 398

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
               +L +SGG D+S  + W  +R   V T + D GQ
Sbjct: 1  MPKRVILAYSGGLDTSVIVRWLTERGYEVITYTADVGQ 38


>gi|315501325|ref|YP_004080212.1| gmp synthase, large subunit [Micromonospora sp. L5]
 gi|315407944|gb|ADU06061.1| GMP synthase, large subunit [Micromonospora sp. L5]
          Length = 518

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 51/186 (27%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DS+   +       D++  +  D+G     E      V K  V      
Sbjct: 219 KEVICGLSGGVDSAVAAALVHRAVGDQLTCVFVDHGLLRAGE---AEQVEKDYVAAT--- 272

Query: 68  KDSLGEDHILP--LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                +  ++      LG ++  +  +     I    +       R           A+ 
Sbjct: 273 ---GIKLKVVDARERFLGALAGVTDPEQKRKIIGREFIRVFEAAAR--------EIAAHG 321

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                +   +               I++      L  +    +  PL  L K E   +  
Sbjct: 322 DVEYLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPEDLKFALVEPLRTLFKDEVRTIGL 381

Query: 186 DIGGQD 191
           ++G  +
Sbjct: 382 ELGLPE 387


>gi|302869863|ref|YP_003838500.1| GMP synthase large subunit [Micromonospora aurantiaca ATCC 27029]
 gi|302572722|gb|ADL48924.1| GMP synthase, large subunit [Micromonospora aurantiaca ATCC 27029]
          Length = 518

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 51/186 (27%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DS+   +       D++  +  D+G     E      V K  V      
Sbjct: 219 KEVICGLSGGVDSAVAAALVHRAVGDQLTCVFVDHGLLRAGE---AEQVEKDYVAAT--- 272

Query: 68  KDSLGEDHILP--LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                +  ++      LG ++  +  +     I    +       R           A+ 
Sbjct: 273 ---GIKLKVVDARERFLGALAGVTDPEQKRKIIGREFIRVFEAAAR--------EIAAHG 321

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                +   +               I++      L  +    +  PL  L K E   +  
Sbjct: 322 DVEYLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPEDLKFALVEPLRTLFKDEVRTIGL 381

Query: 186 DIGGQD 191
           ++G  +
Sbjct: 382 ELGLPE 387


>gi|205829105|sp|Q1JED4|MNMA_STRPD RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 373

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 48/192 (25%), Gaps = 12/192 (6%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +   +    ++  SGG DSS       ++   V  +             C     +   +
Sbjct: 1   MTDNSKIRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDYKD 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +           + +            + +    + +    PN  V     I        
Sbjct: 59  VAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDY 115

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMWLK 176
           A  LG   +  G             +    A            L  E       PL  L+
Sbjct: 116 AMTLGADYVATGHYAQVKRDENGTVYMLRGADNGKDQTYFLSQLSQEQLQKTLFPLGHLQ 175

Query: 177 KYETWKLAQDIG 188
           K E  ++A+  G
Sbjct: 176 KSEVREIAERAG 187


>gi|163816407|ref|ZP_02207773.1| hypothetical protein COPEUT_02596 [Coprococcus eutactus ATCC 27759]
 gi|158448404|gb|EDP25399.1| hypothetical protein COPEUT_02596 [Coprococcus eutactus ATCC 27759]
          Length = 513

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 52/187 (27%), Gaps = 21/187 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS            ++  +  D+G   K E +    V            
Sbjct: 217 KVLCALSGGVDSSVAAVLLSKAIGKQLTCVFVDHGLLRKNEGDEVEAV------------ 264

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G D    L  +   +       +A   +               F+      A ++G 
Sbjct: 265 --FGPDGPYDLNFIRVNAQDRFYSKLAGVTEPEAKRKII----GEEFIRVFEEEAKKIGA 318

Query: 129 -TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLAQD 186
              +V G    D       +   I++      L        +  PL  L K E  K   +
Sbjct: 319 VDFLVQGTIYPDVIESGLDKSAVIKSHHNVGGLPDYVDFKEIVEPLRLLFKDEVRKAGLE 378

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 379 LGIPEYL 385


>gi|302343799|ref|YP_003808328.1| GMP synthase, large subunit [Desulfarculus baarsii DSM 2075]
 gi|301640412|gb|ADK85734.1| GMP synthase, large subunit [Desulfarculus baarsii DSM 2075]
          Length = 517

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 50/186 (26%), Gaps = 18/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS             +  +  D G     E+     V +++  +    
Sbjct: 221 KKVLCALSGGVDSSVVALLLHKAIGPDLHCIFVDNGLLRAGEVNEVSNVFREVFGVNLVV 280

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +      L L+ L  +      + +                  + +L         + 
Sbjct: 281 AKAA----ELFLSRLAGVVDPEQKRRIIGHTFIEVFEAEAKKIGKVDYLAQGTLYPDVIE 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                        S         I++      L     + +  PL  L K E  ++ +++
Sbjct: 337 -------------SVSFRGPSAVIKSHHNVGGLPEHMKMELVEPLRELFKDECREVGREL 383

Query: 188 GGQDLV 193
           G  + +
Sbjct: 384 GLPETI 389


>gi|261838653|gb|ACX98419.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Helicobacter pylori 51]
          Length = 342

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 48/176 (27%), Gaps = 15/176 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS       ++   +  +         ++L          ++   K  +
Sbjct: 2   KIAVLLSGGVDSSYSAYSLKEQGHELVGIY--------LKLHASEKKHDLYIKNAQKACE 53

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG    L +        S++        ++   PN       ++    A   A +LG  
Sbjct: 54  FLGIP--LEVLDFQKDFKSTVYDEFISAYEEGQTPNPCALCNPLMKFGLALDHALKLGCE 111

Query: 130 NIVIGVCETDYSGYPDCRHD-----TIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            I  G                    T         L  E    +  PL  L K + 
Sbjct: 112 KIATGHYARVKEIDKVSYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDI 167


>gi|148240074|ref|YP_001225461.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Synechococcus sp. WH 7803]
 gi|205828977|sp|A5GMJ9|MNMA_SYNPW RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|147848613|emb|CAK24164.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Synechococcus sp. WH 7803]
          Length = 389

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 47/187 (25%), Gaps = 17/187 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +  SGG DSS   +  ++    VE L+        +      C  + +V+     + 
Sbjct: 29  RVAVGLSGGVDSSLTAALLVEAGWEVEGLTL------WLMSGKGACCAEGLVDAAGICEQ 82

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA-YRLGI 128
                H++           +         Q    P         +        A  + G+
Sbjct: 83  LEIPHHVVDSRDTFQREIVNGLIE---GYQAGITPLPCSRCNRAVKFSPMLQWAQEKRGL 139

Query: 129 TNIVIGVCETDYSGYPDCRHD-------TIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
             I  G            R                  +L  E    V  PL  L K +T 
Sbjct: 140 ARIATGHYARLRFDETTGRWRLLRGLDARKDQSYFLYDLTQEVLARVVFPLGELTKPDTR 199

Query: 182 KLAQDIG 188
             A   G
Sbjct: 200 LEAARHG 206


>gi|88608438|ref|YP_506353.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neorickettsia sennetsu str. Miyayama]
 gi|123491921|sp|Q2GDU3|MNMA_NEOSM RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|88600607|gb|ABD46075.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neorickettsia sennetsu str. Miyayama]
          Length = 371

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 52/185 (28%), Gaps = 10/185 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
             ++  SGG DSST  ++      +V  ++             R        I +     
Sbjct: 20  KVMVAMSGGVDSSTVAAYLHRVGYKVIGVTLQLHNNFTSTQTNRKTCCAGSDIFDAKRVA 79

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                  +++    + +     + +N A        P   V     +       +A  L 
Sbjct: 80  AQFGFLHYVVN---MEETFRKEVIENFAESYLKGETPVPCVKCNQTVKFRDLMKIAKSLS 136

Query: 128 ITNIVIGVCETDYSGY-----PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           +  +  G      +             +        N   E    +  PL  LKK ET  
Sbjct: 137 VDALATGHYVRRLTTTNGVELHKGIDPSKDQSYFLFNTTREQLEFLRFPLGNLKKSETRD 196

Query: 183 LAQDI 187
           LA+ +
Sbjct: 197 LARKL 201


>gi|148259910|ref|YP_001234037.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Acidiphilium cryptum JF-5]
 gi|326403136|ref|YP_004283217.1| GMP synthase [Acidiphilium multivorum AIU301]
 gi|146401591|gb|ABQ30118.1| GMP synthase (glutamine-hydrolyzing) [Acidiphilium cryptum JF-5]
 gi|325049997|dbj|BAJ80335.1| GMP synthase [Acidiphilium multivorum AIU301]
          Length = 520

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 52/185 (28%), Gaps = 17/185 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS   +   +   D++  +  D+G      L       + +     ++ 
Sbjct: 224 RVICGLSGGVDSSVAAALIHEAIGDQLVCIFVDHG------LLRAGEADEVVRVFRDRFN 277

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             L       L        +          +        +              A  L  
Sbjct: 278 IRLVHRDASDLFFAALEGVTDPEVKRKTIGR--------LFIEVFEEEAKNLGGADFLAQ 329

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+  +         I++      L     + +  PL  L K E  +L +++G
Sbjct: 330 GTLYPDVIESVSA--RGGPSAVIKSHHNVGGLPDRMRMKLVEPLRELFKDEVRELGRELG 387

Query: 189 GQDLV 193
             + +
Sbjct: 388 LPETI 392


>gi|255322034|ref|ZP_05363184.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter showae RM3277]
 gi|255301138|gb|EET80405.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter showae RM3277]
          Length = 338

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 50/192 (26%), Gaps = 11/192 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DS+      L+    V        ++     +    V +    L      
Sbjct: 2   KILMAMSGGVDSTMSAKMLLEAGHEVVGCYMKLHKKPGYHEKNIDKVARACGYL------ 55

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                H+L    L +     +        ++   PN      + I        A  +G  
Sbjct: 56  -GIPYHVLD---LQEQFDRYVYTPFVSSYKEGKTPNPCALCNHFIKFGELLKFAKSIGCE 111

Query: 130 NIVIGVCETDYSG-YPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
            +  G       G        +         +  E    +  PL    K +  +LA+ + 
Sbjct: 112 KLATGHYIRVQDGLIRVAADPSKDQSYFVAQVPKEIIADMIFPLGDKFKKDIKELAKSLP 171

Query: 189 GQDLVNLILEES 200
                    E S
Sbjct: 172 SFREYGEQAESS 183


>gi|205829100|sp|Q48QM8|MNMA_STRPM RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 373

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 50/192 (26%), Gaps = 12/192 (6%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +   +    ++  SGG DSS       ++   V  +             C     +   +
Sbjct: 1   MTDNSKIRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDYKD 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +           + +            + +    + +    PN  V     I        
Sbjct: 59  VAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDY 115

Query: 123 AYRLGITNIVIGVCET----DYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLK 176
           A  LG   +  G        +       R       +T     L  E       PL  L+
Sbjct: 116 AMTLGADYVATGHYAQVKRDENGTVHMLRGADNGKDQTYFLSQLSQEQLQKTLFPLGHLQ 175

Query: 177 KYETWKLAQDIG 188
           K E  ++A+  G
Sbjct: 176 KSEVREIAERAG 187


>gi|94989481|ref|YP_597582.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pyogenes
           MGAS9429]
 gi|94993368|ref|YP_601467.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pyogenes
           MGAS2096]
 gi|94542989|gb|ABF33038.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pyogenes MGAS9429]
 gi|94546876|gb|ABF36923.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pyogenes MGAS2096]
          Length = 379

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 50/192 (26%), Gaps = 12/192 (6%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +   +    ++  SGG DSS       ++   V  +             C     +   +
Sbjct: 7   MTDNSKIRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDYKD 64

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +           + +            + +    + +    PN  V     I        
Sbjct: 65  VAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDY 121

Query: 123 AYRLGITNIVIGVCET----DYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLK 176
           A  LG   +  G        +       R       +T     L  E       PL  L+
Sbjct: 122 AMTLGADYVATGHYAQVKRDENGTVHMLRGADNGKDQTYFLSQLSQEQLQKTLFPLGHLQ 181

Query: 177 KYETWKLAQDIG 188
           K E  ++A+  G
Sbjct: 182 KSEVREIAERAG 193


>gi|306819683|ref|ZP_07453344.1| GMP synthase [Eubacterium yurii subsp. margaretiae ATCC 43715]
 gi|304552249|gb|EFM40179.1| GMP synthase [Eubacterium yurii subsp. margaretiae ATCC 43715]
          Length = 509

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 53/188 (28%), Gaps = 24/188 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +         +  +  D+G   K E +      K       + 
Sbjct: 215 KKVLLALSGGVDSSVVAAVISKAIGSNLTCIFVDHGLMRKNEGDEVEAAFKNSGMNFIRV 274

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                         LG ++  S  +     I +               +      A ++G
Sbjct: 275 NAQD--------RFLGKLAGVSEPEQKRKIIGEEF-------------IRVFEEEAKKIG 313

Query: 128 -ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLAQ 185
            +  +  G    D           I++      L        +  PL  L K E  +L  
Sbjct: 314 KVDFLAQGTIYADVVESGKGDAAVIKSHHNVGGLPDYVDFKEIIEPLRDLFKDEVRRLGL 373

Query: 186 DIGGQDLV 193
           ++G  + +
Sbjct: 374 ELGLPEYL 381


>gi|291547860|emb|CBL20968.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ruminococcus sp. SR1/5]
          Length = 362

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/189 (12%), Positives = 51/189 (26%), Gaps = 12/189 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR--KKIVELMPK 66
              ++  SGG DSS       +  D     +        + +           + +    
Sbjct: 2   KKVIIAMSGGVDSSVAALLTKESGDECIGATMKLYNNEDIGVHREKTCCSLDDVEDARSV 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   ++          H+ +        ++   PN  +     +           +
Sbjct: 62  AYQMDMPYYVFN---FTADFHTEVMDRFVDAYENGCTPNPCIDCNRYLKFDKMFHRMQEI 118

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-------TVHTPLMWLKKYE 179
           G   IV G            R+   +A++   +     ++        V  PL  L+K +
Sbjct: 119 GYDYIVTGHYARVEYDEKRDRYLLKKAVDDTKDQSYVLYMLTQEQLAHVKLPLGGLRKDQ 178

Query: 180 TWKLAQDIG 188
              +A+  G
Sbjct: 179 VRVIAEKHG 187


>gi|123966685|ref|YP_001011766.1| tRNA-specific 2-thiouridylase MnmA [Prochlorococcus marinus str.
           MIT 9515]
 gi|205816903|sp|A2BXZ8|MNMA_PROM5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|123201051|gb|ABM72659.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prochlorococcus marinus str. MIT 9515]
          Length = 390

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 56/202 (27%), Gaps = 21/202 (10%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           N+  KK    ++  SGG DSS   +  ++   +VE L+        +      C  + +V
Sbjct: 17  NNKSKKQKHIVVGLSGGVDSSLSAALLMEDGWKVEGLTL------WLMKGEGSCCSEGLV 70

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +     +D   + +IL   ++ +      T             +          ++    
Sbjct: 71  DAAGLCEDLGIQHNILDSRVIFEREVIKKTTEGYESGYTPLPCSMCNKNVKFEEMLKFVI 130

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTI---------------RAIETAINLGMESHV 166
                              S       +                        +L  E   
Sbjct: 131 KQKEFTYIATGHYARVIKSSCEHINNSENFQFKDFLLLRGADRNKDQSYFLYSLSQEVLS 190

Query: 167 TVHTPLMWLKKYETWKLAQDIG 188
            +  PL  LKK ET K A  +G
Sbjct: 191 RLILPLGDLKKEETRKEALRLG 212


>gi|57238956|ref|YP_180092.1| tRNA-specific 2-thiouridylase MnmA [Ehrlichia ruminantium str.
          Welgevonden]
 gi|58578889|ref|YP_197101.1| putative tRNA
          (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Ehrlichia ruminantium str. Welgevonden]
 gi|81557340|sp|Q5HBV2|MNMA_EHRRW RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|57161035|emb|CAH57941.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Ehrlichia ruminantium str. Welgevonden]
 gi|58417515|emb|CAI26719.1| Probable tRNA
          (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Ehrlichia ruminantium str. Welgevonden]
          Length = 370

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 19/42 (45%), Gaps = 5/42 (11%)

Query: 3  DIIKKAP-----SALLLFSGGQDSSTCLSWALDRFDRVETLS 39
          D++ K       +A++  SGG DSS   +       +V  ++
Sbjct: 8  DLLVKNKPPTSTTAVVAMSGGVDSSVAAALLHKLGYKVIGIT 49


>gi|45659143|ref|YP_003229.1| argininosuccinate synthase [Leptospira interrogans serovar
          Copenhageni str. Fiocruz L1-130]
 gi|47605392|sp|P61524|ASSY_LEPIC RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|45602389|gb|AAS71866.1| argininosuccinate synthase [Leptospira interrogans serovar
          Copenhageni str. Fiocruz L1-130]
          Length = 403

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 6  KKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNK 47
          K     +L +SGG D+S  L+W  D     V   + D GQ+ +
Sbjct: 5  KPVKKIVLAYSGGLDTSVILTWLKDTYGCEVIAFTADIGQKEE 47


>gi|24216865|ref|NP_714346.1| argininosuccinate synthase [Leptospira interrogans serovar Lai
          str. 56601]
 gi|30172845|sp|Q8EYP7|ASSY_LEPIN RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|24198242|gb|AAN51364.1|AE011570_7 argininosuccinate synthase [Leptospira interrogans serovar Lai
          str. 56601]
          Length = 403

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 6  KKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNK 47
          K     +L +SGG D+S  L+W  D     V   + D GQ+ +
Sbjct: 5  KPVKKIVLAYSGGLDTSVILTWLKDTYGCEVIAFTADIGQKEE 47


>gi|19114314|ref|NP_593402.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methylt ransferase
           [Schizosaccharomyces pombe 972h-]
 gi|3122971|sp|O13947|MTU1_SCHPO RecName: Full=Mitochondrial tRNA-specific 2-thiouridylase 1
 gi|2388924|emb|CAB11659.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Schizosaccharomyces pombe]
          Length = 415

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 50/199 (25%), Gaps = 15/199 (7%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY---------GQRNKVELECRLCV 56
           K      +  SGG DSS        +   VE +             G   + +      V
Sbjct: 29  KSQDKVFVAMSGGVDSSFSAYLLKSQGYNVEGVFMRNWLDEDSAPSGCPAERDWATVQKV 88

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
            KK+     ++       +++    L D+  + LT N  +                    
Sbjct: 89  CKKLNISCRRFNFEKEYWNLVFEPSL-DLYENGLTPNPDVSCNRQVKFGALFDALKKHCE 147

Query: 117 VFAATL---AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
                    A      ++V       +   P               +  E+      PL 
Sbjct: 148 NNVKGDWWLASGHYAKSVVNIETNESHMCIP--TDKRKDQTLFLCTIRKEALEKTIFPLH 205

Query: 174 WLKKYETWKLAQDIGGQDL 192
              K    K A   G +++
Sbjct: 206 NWTKENVKKQASSAGFKEI 224


>gi|260061668|ref|YP_003194748.1| argininosuccinate synthase [Robiginitalea biformata HTCC2501]
 gi|88785800|gb|EAR16969.1| argininosuccinate synthase [Robiginitalea biformata HTCC2501]
          Length = 394

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 29/83 (34%), Gaps = 3/83 (3%)

Query: 9  PSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE--LMP 65
             +L +SGG D+S C           V  ++ + G  +K +L        ++       
Sbjct: 2  KKLVLAYSGGLDTSYCAHMLSHKEGYEVHAVTVNTGGFDKEQLAGIEERALELGASTYTA 61

Query: 66 KWKDSLGEDHILPLAILGDISHS 88
                  D ++   I G++  +
Sbjct: 62 IDAVQSFYDRVVKYLIFGNVLRN 84


>gi|84501069|ref|ZP_00999304.1| GMP synthase [Oceanicola batsensis HTCC2597]
 gi|84391136|gb|EAQ03554.1| GMP synthase [Oceanicola batsensis HTCC2597]
          Length = 523

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 54/183 (29%), Gaps = 17/183 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS   +   +   + +  +  D+G     E        +++V +     
Sbjct: 227 KVICALSGGVDSSVAAALLHEAIGENLTCVFVDHGLLRLNE-------AEEVVGMFRDHM 279

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +            LG +   S  +      +   +   F+                  G 
Sbjct: 280 NLSVIHAQEQELFLGALEGVSDPE-----TKRKTIGRLFIDVFQKYADQIEGARFLAQGT 334

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
               +    +   G       TI++      L  +  + +  PL  L K E   L +++G
Sbjct: 335 LYPDVIESVSFSGGP----SVTIKSHHNVGGLPEKMGLKLVEPLRELFKDEVRTLGRELG 390

Query: 189 GQD 191
             D
Sbjct: 391 LPD 393


>gi|330803532|ref|XP_003289759.1| hypothetical protein DICPUDRAFT_154197 [Dictyostelium purpureum]
 gi|325080152|gb|EGC33720.1| hypothetical protein DICPUDRAFT_154197 [Dictyostelium purpureum]
          Length = 428

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 47/195 (24%), Gaps = 10/195 (5%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLC------- 55
           D+I   P   +  SGG DS+        +   V  +        +    C+         
Sbjct: 53  DLIPTKPKVAVGMSGGVDSTITAKILKHQGFDVTGVFIKSWDDIEESGRCQGERDYKDAI 112

Query: 56  VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
              K +++     D + +              S +T N  +        + F+      F
Sbjct: 113 AVAKYLDIPMYQADFVKDYWNRVFTGFLKDYQSGITPNPDVWCNREIKFDLFIDFAKENF 172

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
            V      +      +     + +          +            +       P+   
Sbjct: 173 GVDYIATGHYSN---LYYDKNDPNKIELYRSVDKSKDQTYFLCMTKTKGLANSIFPIGDF 229

Query: 176 KKYETWKLAQDIGGQ 190
            K +    A+ I   
Sbjct: 230 TKDKIIDFAKTIPDF 244


>gi|240948512|ref|ZP_04752885.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Actinobacillus minor NM305]
 gi|240297020|gb|EER47591.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Actinobacillus minor NM305]
          Length = 389

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 37/134 (27%), Gaps = 4/134 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 27  NAKKKVIIGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 83

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     ++            +  + I F  F    A  
Sbjct: 84  AVADKLG-MKLHKINFAAEYWDNVFEHFLSEYKAGRTPNPDILCNKEIKFKAFLEYAAED 142

Query: 126 LGITNIVIGVCETD 139
           LG   I  G     
Sbjct: 143 LGADYIATGHYVRR 156


>gi|225571441|ref|ZP_03780437.1| hypothetical protein CLOHYLEM_07539 [Clostridium hylemonae DSM
           15053]
 gi|225159917|gb|EEG72536.1| hypothetical protein CLOHYLEM_07539 [Clostridium hylemonae DSM
           15053]
          Length = 515

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 51/190 (26%), Gaps = 22/190 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   L   SGG DSS            ++  +  D+G   K E +    V          
Sbjct: 216 SGKVLCALSGGVDSSVAAVMLSKAIGSQLTCVFVDHGLLRKNEGDEVEAV---------- 265

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G +    L  +   +     + +A   +  +            F+      A ++
Sbjct: 266 ----FGPEGHYDLNFIRVNAQERFYERLAGVSEPEDKRKII----GEEFIRVFEEEARKI 317

Query: 127 GITNIV---IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           G  + +       +   SG                         +  PL  L K E  K 
Sbjct: 318 GAVDFLVQGTIYPDVVESGLGGESAVIKSHHNVGGLPDYVDFKEIIEPLRDLFKDEVRKA 377

Query: 184 AQDIGGQDLV 193
             ++G  + +
Sbjct: 378 GLEMGIPEYL 387


>gi|223041989|ref|ZP_03612173.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Actinobacillus minor 202]
 gi|223017246|gb|EEF15674.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Actinobacillus minor 202]
          Length = 389

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 37/134 (27%), Gaps = 4/134 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 27  NAKKKVIIGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 83

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     ++            +  + I F  F    A  
Sbjct: 84  AVADKLG-MKLHKINFAAEYWDNVFEHFLSEYKAGRTPNPDILCNKEIKFKAFLEYAAED 142

Query: 126 LGITNIVIGVCETD 139
           LG   I  G     
Sbjct: 143 LGADYIATGHYVRR 156


>gi|217034343|ref|ZP_03439759.1| hypothetical protein HP9810_491g36 [Helicobacter pylori 98-10]
 gi|216943228|gb|EEC22695.1| hypothetical protein HP9810_491g36 [Helicobacter pylori 98-10]
          Length = 508

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 16/180 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DS+   +       D +  +  D+G   K E E    + K +     +  
Sbjct: 211 KVLCAVSGGVDSTVVATLLHRAIKDNLIAVFVDHGLLRKNEKERVQAMFKDL-----QIP 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  +   + L+ L  +S   L + +            F        L        ++  
Sbjct: 266 LNTIDAKEIFLSKLKGVSEPELKRKII----GETFIEVFEKEAKKHHLKG------KIEF 315

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
            +      +   S         I+       L       +  PL  L K E   L +++G
Sbjct: 316 LSQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEVRLLGKELG 375


>gi|109947068|ref|YP_664296.1| GMP synthase [Helicobacter acinonychis str. Sheeba]
 gi|123173520|sp|Q17YH9|GUAA_HELAH RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|109714289|emb|CAJ99297.1| GMP synthase [Helicobacter acinonychis str. Sheeba]
          Length = 508

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 16/180 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DS+   +       D +  +  D+G   K E E    + K +     +  
Sbjct: 211 RVLCAVSGGVDSTVVATLLHRAIKDNLIAVFVDHGLLRKNEKEKVQAMFKDL-----QIP 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  +   + L+ L  +S   L + +            F        L        ++  
Sbjct: 266 LNTIDAKEIFLSKLKGVSEPELKRKII----GETFIEVFEKEAKKHHLKG------KIEF 315

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   S         I++      L       +  PL  L K E   L +++G
Sbjct: 316 LAQGTLYPDVIESVSVKGPSKVIKSHHNVGGLPEWMDFKLIEPLRELFKDEVRLLGKELG 375


>gi|315655597|ref|ZP_07908495.1| argininosuccinate synthase [Mobiluncus curtisii ATCC 51333]
 gi|315489661|gb|EFU79288.1| argininosuccinate synthase [Mobiluncus curtisii ATCC 51333]
          Length = 410

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
               +L +SGG D+S  + W  D+       +S D GQ  +     R     
Sbjct: 1  MNERVVLAYSGGLDTSVAIGWMKDKLGVETIAVSVDVGQGGEDMDVIRQRALD 53


>gi|291542284|emb|CBL15394.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ruminococcus bromii L2-63]
          Length = 357

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 55/192 (28%), Gaps = 14/192 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRKKIVEL 63
               AL+  SGG DSS       D       ++   FD     +   +   C    I + 
Sbjct: 1   MTNKALIAMSGGVDSSVAAFLTKDMGYDATGITLKLFDNEDIGEKREKT-CCSLDDIDDA 59

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      ++       D    ++        ++   PN  +     I        A
Sbjct: 60  RRVCLKLGIPYYVYN---FKDSFKENVIDRFIRAYENGTTPNPCIDCNRFIKFEKLIRRA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT-------PLMWLK 176
             L    +V G   T        R+   +++++  +     +            PL    
Sbjct: 117 EELDFDCVVTGHYSTIEYDKGADRYLLKKSVDSTKDQSYVLYCLTQRQLAKTLLPLGTYT 176

Query: 177 KYETWKLAQDIG 188
           K +  ++A ++G
Sbjct: 177 KEKVREIANELG 188


>gi|281412254|ref|YP_003346333.1| PP-loop domain protein [Thermotoga naphthophila RKU-10]
 gi|281373357|gb|ADA66919.1| PP-loop domain protein [Thermotoga naphthophila RKU-10]
          Length = 304

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 57/201 (28%), Gaps = 18/201 (8%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
            +  +    L+  SGG+DS +           V+ L    G+     ++    + +K  E
Sbjct: 42  KMFDRNSKILIAVSGGKDSVSLWHMLKKLGHEVDALFIRAGK--SGMVQKAQEIVEKNAE 99

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           L+        + HI+          +     ++ +     L         ++        
Sbjct: 100 LLN------TKLHIVD--------ATEYFGGLSTQEIAIMLRRPVCSICGVVRRYLMNKF 145

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           AY  G   +V G    D +          +  E  +          H  L+   K     
Sbjct: 146 AYENGYNVVVTGHNLNDEASVLLGNILHWQ--EGYMERQWPLLPKTHEKLVPKAKPLVLN 203

Query: 183 LAQDIGGQDLVNLILEESHTC 203
             +DI     +N I      C
Sbjct: 204 YEEDIKLYATLNEIPHLEMAC 224


>gi|229524795|ref|ZP_04414200.1| LPS biosynthesis protein WbpG [Vibrio cholerae bv. albensis VL426]
 gi|229338376|gb|EEO03393.1| LPS biosynthesis protein WbpG [Vibrio cholerae bv. albensis VL426]
          Length = 380

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/177 (12%), Positives = 47/177 (26%), Gaps = 6/177 (3%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            +L  SGG DS+       +   R   +  D G  +++ +     + K     +     +
Sbjct: 71  CILGLSGGLDSAYLALVLKEYGMRPLVVHVDAGWNSELAVYNIEKIVKYCGYDLHTHVMN 130

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
             E   L LA L      +    V       +L +  V  +    +         +  + 
Sbjct: 131 WPEVRDLQLAYLKA--GVANQDVVQDHAFFASLYHFAVDNKVNYVISGGNIATESVIASA 188

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                   D            +       +        + P +  KK +  +    +
Sbjct: 189 --WQHGAMDAINLKAIHRKFGKLPLKDYKVIGFLQYYFYYPFV--KKMKIIRPLNYL 241


>gi|90421099|ref|ZP_01229001.1| argininosuccinate synthase [Aurantimonas manganoxydans SI85-9A1]
 gi|90334591|gb|EAS48371.1| argininosuccinate synthase [Aurantimonas manganoxydans SI85-9A1]
          Length = 406

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 53/199 (26%), Gaps = 13/199 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L +SGG D+S  L W   +    V T + D GQ  ++E        +K  E+M   
Sbjct: 8   KKVVLAYSGGLDTSIILKWLQTEYGAEVVTFTADLGQGEELEP------ARKKAEMMGIK 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +  + +               +        +   ++    +  R +         A   G
Sbjct: 62  EIYIEDVREEFCRDFVFPMFRANAVYEGTYLLGTSIARPLISKRLVEIARETGADAIAHG 121

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            T         + S Y       + A          + +          K +        
Sbjct: 122 ATGKGNDQVRFELSAYALAPDIKVIAPWRDWEFKSRTDLLDFAE-----KNQITVTKDKR 176

Query: 188 GGQDLVNLILEESHTCYLG 206
           G      +     H+   G
Sbjct: 177 GEAPFS-VDANLLHSSSEG 194


>gi|317178655|dbj|BAJ56443.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Helicobacter pylori F30]
          Length = 508

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 55/182 (30%), Gaps = 20/182 (10%)

Query: 10  SALLLFSGGQDSS---TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             L   SGG DS+   T L  A+   D +  +  D+G   K E E    + K +     +
Sbjct: 211 KVLCAVSGGVDSTVVATLLYRAIK--DNLIAVFVDHGLLRKNEKERVQAMFKDL-----Q 263

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +  +   + L+ L  +S   L + +            F        L        ++
Sbjct: 264 IPLNTIDAKEIFLSKLKGVSEPELKRKII----GETFIEVFEKEAKKHHLKG------KI 313

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                     +   S         I+       L       +  PL  L K E   L ++
Sbjct: 314 EFLAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEVRLLGKE 373

Query: 187 IG 188
           +G
Sbjct: 374 LG 375


>gi|290969038|ref|ZP_06560573.1| GMP synthase (glutamine-hydrolyzing) [Megasphaera genomosp. type_1
           str. 28L]
 gi|290780994|gb|EFD93587.1| GMP synthase (glutamine-hydrolyzing) [Megasphaera genomosp. type_1
           str. 28L]
          Length = 511

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 50/187 (26%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +        ++  +  D+G   K E +      +       +
Sbjct: 216 NGKVVLALSGGVDSSVAAALISRAVGKQLTCIFVDHGLMRKNEGDEVERAFQSSGMNFIR 275

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +           LG ++H    +     I +  +      GR           A   
Sbjct: 276 VDAAA--------RFLGKLAHVGDPEAKRKIIGEEFIRVFEEEGRK--------IGAVDF 319

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                +        +G                   +     +  PL  L K E  +L  +
Sbjct: 320 LAQGTIYPDVIESGAGDAAVIKSH---HNVGGLPAVVDFKGLIEPLRNLFKDEVRELGSE 376

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 377 LGLPDYL 383


>gi|241667518|ref|ZP_04755096.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Francisella philomiragia subsp. philomiragia ATCC
           25015]
 gi|254876064|ref|ZP_05248774.1| tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Francisella philomiragia subsp. philomiragia ATCC
           25015]
 gi|254842085|gb|EET20499.1| tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Francisella philomiragia subsp. philomiragia ATCC
           25015]
          Length = 359

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/132 (12%), Positives = 36/132 (27%), Gaps = 5/132 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +    ++  SGG DSS        +   V  +     + +  +  C     + I +    
Sbjct: 2   QNKKIIVGISGGVDSSVSALLLKQQGYDVTGVFMKNWEEDDTDEFCS--AEQDIADAQAV 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     +           ++ ++   + +    PN  +     I      +  + L
Sbjct: 60  CDSIGIPFKKIN---FAAEYWDNVFEHFLTEYKAGRTPNPDILCNKEIKFKAFLSYVHLL 116

Query: 127 GITNIVIGVCET 138
           G   I  G    
Sbjct: 117 GGDYIATGHYAR 128


>gi|209560263|ref|YP_002286735.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pyogenes NZ131]
 gi|229487429|sp|B5XJA6|MNMA_STRPZ RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|209541464|gb|ACI62040.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Streptococcus pyogenes NZ131]
          Length = 373

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 48/192 (25%), Gaps = 12/192 (6%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +   +    ++  SGG DSS       ++   V  +             C     +   +
Sbjct: 1   MTDNSKIRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDYKD 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +           + +            + +    + +    PN  V     I        
Sbjct: 59  VAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDY 115

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMWLK 176
           A  LG   +  G             H    A            L  E       PL  L+
Sbjct: 116 AMTLGADYVATGHYAQVKRDENGKVHMLRGADNGKDQTYFLSQLSQEQLQKTLFPLGHLQ 175

Query: 177 KYETWKLAQDIG 188
           K E  ++A+  G
Sbjct: 176 KSEVREIAERAG 187


>gi|71483021|gb|AAZ32455.1| NH(3)-dependent NAD+ synthetase [uncultured euryarchaeote Alv-FOS1]
          Length = 264

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 30/85 (35%), Gaps = 2/85 (2%)

Query: 10  SALLLFSGGQDSSTCLSW-ALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             ++  SGG DS+  L   A+    +RV  +        + E E    V K+      + 
Sbjct: 27  KVVVGLSGGLDSAVVLKLCAMSLGPERVLAVHMPDSVTPEEESEDARNVAKEAEVEFREI 86

Query: 68  KDSLGEDHILPLAILGDISHSSLTK 92
           +     + I  +A L      +  K
Sbjct: 87  RIDDAVETIADMAALESSGAVANLK 111


>gi|15612037|ref|NP_223689.1| GMP synthase [Helicobacter pylori J99]
 gi|12230201|sp|Q9ZKG4|GUAA_HELPJ RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|4155553|gb|AAD06548.1| GMP SYNTHETASE [Helicobacter pylori J99]
          Length = 508

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 52/180 (28%), Gaps = 16/180 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DS+   +       D +  +  D+G   K E E    + K +     +  
Sbjct: 211 KVLCAVSGGVDSTVVATLLHRAIKDNLIAVFVDHGLLRKNEKEKVQAMFKDL-----QIP 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  +   + L+ L  +S   L + +            F        L        ++  
Sbjct: 266 LNTIDAKEVFLSKLKGVSEPELKRKII----GETFIEVFEKEAKKHHLKG------KIEF 315

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   S         I+       L       +  PL  L K E   L +++G
Sbjct: 316 LAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEVRLLGKELG 375


>gi|148265774|ref|YP_001232480.1| NAD synthetase [Geobacter uraniireducens Rf4]
 gi|189030449|sp|A5G7Y9|NADE_GEOUR RecName: Full=NH(3)-dependent NAD(+) synthetase
 gi|146399274|gb|ABQ27907.1| NH(3)-dependent NAD(+) synthetase [Geobacter uraniireducens Rf4]
          Length = 273

 Score = 46.8 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 20/60 (33%), Gaps = 2/60 (3%)

Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           A+L  SGG DS+     A +    + V   +  Y   N         V +++       
Sbjct: 30 KAVLGLSGGIDSALVAYLAAEALGPENVYACTMPYRTSNPESEAHARLVAERLGINYRVI 89


>gi|195979019|ref|YP_002124263.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|229487422|sp|B4U0P1|MNMA_STREM RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|195975724|gb|ACG63250.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TrmU
           [Streptococcus equi subsp. zooepidemicus MGCS10565]
          Length = 374

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 48/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 2   MTD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDY 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 58  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRSGRTPNPDVMCNKEIKFKAFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 115 DYAMTLGADYVATGHYAQIKRDENGVVHMLRGLDKGKDQTYFLSQLSQEQLQKTMFPLGH 174

Query: 175 LKKYETWKLAQDIG 188
           L+K E   +A+  G
Sbjct: 175 LQKSEVRAIAEQAG 188


>gi|146307422|ref|YP_001187887.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudomonas mendocina ymp]
 gi|205816890|sp|A4XUY9|MNMA_PSEMY RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|145575623|gb|ABP85155.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudomonas mendocina ymp]
          Length = 370

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 33/136 (24%), Gaps = 5/136 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS      +++  +VE L       +     C       + +     
Sbjct: 6   TQRVIVGMSGGVDSSVSALLLMEQGYQVEGLFMKNWDEDDGTEYC--TAMDDLADAQAVC 63

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                + H        +   +     +A            +  R  I        A  LG
Sbjct: 64  DRIGIKLHT--ANFAAEYWDNVFEHFLAEYKAGRTPNPDILCNRE-IKFKAFLDYALSLG 120

Query: 128 ITNIVIGVCETDYSGY 143
              I  G         
Sbjct: 121 ADLIATGHYVRRRDID 136


>gi|52219052|ref|NP_001004603.1| argininosuccinate synthase [Danio rerio]
 gi|82198389|sp|Q66I24|ASSY_DANRE RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|51858476|gb|AAH81578.1| Argininosuccinate synthetase 1 [Danio rerio]
 gi|158254326|gb|AAI54283.1| Argininosuccinate synthetase 1 [Danio rerio]
          Length = 414

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 24/57 (42%), Gaps = 3/57 (5%)

Query: 7  KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +   ++L +SGG D+S  L W  ++   V     + GQ    + +      +K+  
Sbjct: 1  MSKGLVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQD--EDFDVARKKAEKLGA 55


>gi|68171265|ref|ZP_00544667.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ehrlichia chaffeensis str. Sapulpa]
 gi|88657652|ref|YP_507667.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ehrlichia chaffeensis str. Arkansas]
 gi|123492948|sp|Q2GFW6|MNMA_EHRCR RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|67999312|gb|EAM85959.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ehrlichia chaffeensis str. Sapulpa]
 gi|88599109|gb|ABD44578.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Ehrlichia chaffeensis str. Arkansas]
          Length = 367

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 53/180 (29%), Gaps = 8/180 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV----RKKIVELMP 65
           +A++  SGG DSS   +       +V  ++         +  C   +     K++  +M 
Sbjct: 20  TAVVAMSGGVDSSVAAALLHKLGYKVIGITLQLYNNTTGKGACCGSLDTQDAKQVASIMG 79

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
               +L  + +    ++ D   + +     +     N    F    N    + A  L   
Sbjct: 80  FPHYTLNYEKVFKEEVIDDFIDTYMQGKTPIPCIKCNQVVKFRDLLNATKSLDADILVTG 139

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
             I  I        YS     +  +     T I         +        K    KLA+
Sbjct: 140 HYIRKIEQDDDIYVYSSKDTKKDQSYFLFATTIEQLKFLRFPLGNFH----KDNIRKLAE 195


>gi|307128612|ref|YP_003880642.1| putative argininosuccinate synthase/acetyltransferase activity of
           N-acetylglutamate synthase [Candidatus Sulcia muelleri
           CARI]
 gi|306483074|gb|ADM89944.1| putative argininosuccinate synthase/acetyltransferase activity of
           N-acetylglutamate synthase [Candidatus Sulcia muelleri
           CARI]
          Length = 578

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 27/59 (45%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K    LL +SGG D+S CL + ++   +V T+  + G  N  +LE        I  L  
Sbjct: 186 KGDKILLAYSGGLDTSFCLKYLINEGYKVITIIINTGGFNNKDLESIEKKAINIGALYH 244


>gi|303239981|ref|ZP_07326503.1| protein of unknown function DUF71 ATP-binding region [Acetivibrio
           cellulolyticus CD2]
 gi|302592460|gb|EFL62186.1| protein of unknown function DUF71 ATP-binding region [Acetivibrio
           cellulolyticus CD2]
          Length = 319

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 45/135 (33%), Gaps = 16/135 (11%)

Query: 3   DIIKKAPS----ALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVR 57
           +I+    S     ++++SGG+DS+  L      +  +V  ++ D G  +    +      
Sbjct: 10  NILSSKKSQGYDCVVMYSGGKDSTYLLYLMKKVYQKKVIAVTVDNGFEDDFTWKKMGNAL 69

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           + +       K                   +S+     +  ++N     F+   + +   
Sbjct: 70  EVLDVPHEVIKPGTDNFK---------WMFNSMITEYELFKRENTNHICFIC--HYVMNA 118

Query: 118 FAATLAYRLGITNIV 132
            AA  A    I  ++
Sbjct: 119 CAARFAAENDIPFVI 133


>gi|297270049|ref|XP_001106949.2| PREDICTED: argininosuccinate synthase-like [Macaca mulatta]
          Length = 533

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVET 37
            D +    S +L +SGG D+S  L W  ++   V  
Sbjct: 74  RDTMSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIA 109


>gi|289522462|ref|ZP_06439316.1| argininosuccinate synthase [Anaerobaculum hydrogeniformans ATCC
          BAA-1850]
 gi|289504298|gb|EFD25462.1| argininosuccinate synthase [Anaerobaculum hydrogeniformans ATCC
          BAA-1850]
          Length = 419

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 23/49 (46%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
              +L +SGG D+S  + W +D+   V T + D GQ   +E      +
Sbjct: 3  KGKVVLAYSGGLDTSVAIKWLMDQGYDVVTFTADVGQVVDLEACKERAL 51


>gi|302346886|ref|YP_003815184.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella melaninogenica ATCC 25845]
 gi|302150717|gb|ADK96978.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella melaninogenica ATCC 25845]
          Length = 360

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/189 (11%), Positives = 47/189 (24%), Gaps = 7/189 (3%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN    +     +L SGG DSS  +          +      G   K + +C     + +
Sbjct: 1   MNIQELEGKRIAVLLSGGVDSSVVVYEFARLGLHPDCFYIKIGPEEKEDWDCNSE--EDL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                  +    +  ++      +         +             +  R I F  F  
Sbjct: 59  EMATLVTRRFGCKLEVID--CHKEYWDQVTRYTMEKVKAGFTPNPDVMCNRLIKFGAFDE 116

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKK 177
            + +   +             G            +    L       +     P+   +K
Sbjct: 117 KMGHDYDLIATGHYAQTEWIDGRKWLTTSPDPVKDQTDFLAQIYDWQLKKAIFPIGHYEK 176

Query: 178 YETWKLAQD 186
            E  ++A+ 
Sbjct: 177 NEVREIAER 185


>gi|183981170|ref|YP_001849461.1| GMP synthase, GuaA [Mycobacterium marinum M]
 gi|226739643|sp|B2HDP0|GUAA_MYCMM RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|183174496|gb|ACC39606.1| GMP synthase, GuaA [Mycobacterium marinum M]
          Length = 525

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 53/184 (28%), Gaps = 16/184 (8%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A+   SGG DS+   +       DR+  +  D+G      L       +   + +   K 
Sbjct: 228 AICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHG------LLRAGERAQVERDFVAATKA 281

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +L     + +A     + S +T     +            G     L          G  
Sbjct: 282 NLV---TVDVADTFLAALSGVTDPEGKRKIIGRQFIRAFEGAVRDVLDGRDIEFLVQGTL 338

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
              +                 I++      L  +    +  PL  L K E   + +++G 
Sbjct: 339 YPDVVESGGGSGTA------NIKSHHNVGGLPDDLKFALVEPLRLLFKDEVRAVGRELGL 392

Query: 190 QDLV 193
            + +
Sbjct: 393 PEEI 396


>gi|83320221|gb|ABC02786.1| putative amidotransferase [Actinomadura melliaura]
          Length = 602

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 1/103 (0%)

Query: 13  LLFSGGQDSSTCLSWALDRFDR-VETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++ SGG DSST  + A+ + D  V T S D+ Q +         V +    L    ++ +
Sbjct: 261 VILSGGLDSSTLAALAMRQADAPVRTFSVDFRQPDGSGTADAPFVAEAAEHLGLDHRELV 320

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            +   L    L      +    + +   DN+L   F   R  +
Sbjct: 321 LDSAALAERSLRTGVVHARDFPLGLGDMDNSLYLLFRAVRQHV 363


>gi|71033483|ref|XP_766383.1| GMP synthase [Theileria parva strain Muguga]
 gi|68353340|gb|EAN34100.1| GMP synthase, putative [Theileria parva]
          Length = 520

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 54/185 (29%), Gaps = 16/185 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPK 66
            + +   SGG DS+           DR   +  D G  R+    EC   VRK++  +   
Sbjct: 221 KNVVAALSGGVDSTVSAKMVQSVIGDRFHGVMVDTGLMRHNEIAECEKRVRKEVPGIKLT 280

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            + S      +    L  ++   + + +             V        +       + 
Sbjct: 281 VRHSQN----VFFKELSGVTDPEMKRKIIG----------RVYIEEFERAIKELGFNEKN 326

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +        +   S         +++      L       +  P+ +L K E  +L + 
Sbjct: 327 CLLLQGTIYPDIIESELNRRSKLPVKSHHNVGGLPERMKFELIEPVRYLFKEEVRELGRL 386

Query: 187 IGGQD 191
           +   +
Sbjct: 387 LKMSE 391


>gi|330954721|gb|EGH54981.1| tRNA s(4)U8 sulfurtransferase [Pseudomonas syringae Cit 7]
          Length = 225

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 15/35 (42%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN 46
           L+L SGG DS+      + R        F+ G R 
Sbjct: 183 LVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRA 217


>gi|315634589|ref|ZP_07889873.1| argininosuccinate synthase [Aggregatibacter segnis ATCC 33393]
 gi|315476537|gb|EFU67285.1| argininosuccinate synthase [Aggregatibacter segnis ATCC 33393]
          Length = 445

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 25/65 (38%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          + K     + FSGG D+S  L W           + + GQ ++ + E      K+    M
Sbjct: 9  LPKGEKVGIAFSGGLDTSAALLWMRQHGAIPCAYTANLGQPDEEDYEAIPRKAKEYGAEM 68

Query: 65 PKWKD 69
           +  D
Sbjct: 69 ARLID 73


>gi|260495481|ref|ZP_05815607.1| GMP synthase domain-containing protein [Fusobacterium sp. 3_1_33]
 gi|260197018|gb|EEW94539.1| GMP synthase domain-containing protein [Fusobacterium sp. 3_1_33]
          Length = 512

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 18/188 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +        ++  +  D G   K E        K+++E+  K
Sbjct: 215 NKKVILGLSGGVDSSVAAALINKAIGKQLTCIFVDTGLLRKDE-------AKQVMEVYAK 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D   +        L  ++  +  +     I    +                   A  L
Sbjct: 268 NFDMNIKCINAEERFLTKLAGVTDPETKRKIIGKEFVE-------VFNEEAKKIEGAEFL 320

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+     P      I++      L  +    +  PL  L K E  K+ ++
Sbjct: 321 AQGTIYPDVIESVSVKGPSVT---IKSHHNVGGLPKDLKFELLEPLRELFKDEVRKVGRE 377

Query: 187 IGGQDLVN 194
           +G  D + 
Sbjct: 378 LGIPDYMI 385


>gi|255262865|ref|ZP_05342207.1| tRNA(Ile)-lysidine synthase [Thalassiobium sp. R2A62]
 gi|255105200|gb|EET47874.1| tRNA(Ile)-lysidine synthase [Thalassiobium sp. R2A62]
          Length = 422

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 12/74 (16%)

Query: 13 LLFSGGQDSSTCLS----WALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
          +  SGG DS+  L     WA      V  ++ D+GQR        +  +++ + +     
Sbjct: 34 VAVSGGSDSTALLLACVEWAKSNGVAVHAVTVDHGQR--------VEAKQEAIAVSELTA 85

Query: 69 DSLGEDHILPLAIL 82
          +   E  IL L  L
Sbjct: 86 ELGVEHSILTLETL 99


>gi|14520926|ref|NP_126401.1| hypothetical protein PAB1895 [Pyrococcus abyssi GE5]
 gi|5458143|emb|CAB49632.1| 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS
           reductase) [Pyrococcus abyssi GE5]
          Length = 429

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 26/65 (40%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           A++ +SGG+DS+  L  A   FD V  +         +  E    V  K+   + K +  
Sbjct: 236 AIVPWSGGKDSTAALILARKVFDDVTAVYVKMEYEMPLTDEYVEEVASKLNINLVKVEVP 295

Query: 71  LGEDH 75
           +    
Sbjct: 296 MPIHK 300


>gi|294101584|ref|YP_003553442.1| GMP synthase, large subunit [Aminobacterium colombiense DSM 12261]
 gi|293616564|gb|ADE56718.1| GMP synthase, large subunit [Aminobacterium colombiense DSM 12261]
          Length = 510

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 56/200 (28%), Gaps = 28/200 (14%)

Query: 3   DIIKK-------APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECR 53
           D++ K           +   SGG DS+           DR+E +  + G  R++      
Sbjct: 202 DMMVKDVQQKTENARVICGLSGGVDSTVAAVLTSKAIGDRLECIFVNNGLLRHR----EA 257

Query: 54  LCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
             V +K  +L          +  L                  +  +           R  
Sbjct: 258 ERVLEKYKQLDLNVHYVDASNRFLD------------ALKGVIDPEQKRKIIGETFIRVF 305

Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
                    A  L    +   V E   SG+       I++      L  +  + V  PL 
Sbjct: 306 EAEAAKIHNAEWLLQGTLYPDVIE---SGHKGKGASVIKSHHNVGGLPEDMKLKVLEPLR 362

Query: 174 WLKKYETWKLAQDIGGQDLV 193
            L K E   +   +G  + +
Sbjct: 363 DLFKDEVRTIGALLGVPEEI 382


>gi|288554931|ref|YP_003426866.1| GMP synthase [Bacillus pseudofirmus OF4]
 gi|288546091|gb|ADC49974.1| GMP synthase [Bacillus pseudofirmus OF4]
          Length = 513

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 54/187 (28%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS           D++  +  D+G    +  +    V K   E    
Sbjct: 218 NKKVLCALSGGVDSSVVAVLIHKAIGDQLTCMFIDHG---LLRKDEAEGVMKTFSEGFNM 274

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +       L+ L  +S     + +                 ++ FL          
Sbjct: 275 NVIKIDAQERF-LSKLKGVSDPEQKRKIIGNEFIYVFEEETSQLTDMDFLAQ-------- 325

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                  G   TD          TI++      L  +   T+  PL  L K E  +L  +
Sbjct: 326 -------GTLYTDIIESGTDTAQTIKSHHNVGGLPEDMKFTLIEPLNTLFKDEVRELGSE 378

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 379 LGIPDEI 385


>gi|284929056|ref|YP_003421578.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [cyanobacterium UCYN-A]
 gi|284809515|gb|ADB95220.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [cyanobacterium UCYN-A]
          Length = 352

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/182 (12%), Positives = 52/182 (28%), Gaps = 11/182 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS   +   D+   V  L+        +      C  + +V+     + 
Sbjct: 3   KIVVGLSGGVDSSVAAASLCDQGYEVSGLTL------WLMKGKGQCCSEGMVDAAHICEQ 56

Query: 70  SLGEDHILPLAILGDISHSSLTK---NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                +I+    L   +            +     +  N  V  + ++           +
Sbjct: 57  LNIPHYIVDAKELFKKNIIDYLVSGYKSGITPLPCSQCNRSVKFKPMLDYAQQELDCDLI 116

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYETWKLA 184
              +      + +   Y   R       ++     +   +      PL    K +T ++A
Sbjct: 117 ATGHYARIRYDKETDKYKLLRAIDPNKDQSYFLYDLPQDILAKTIFPLGEQTKEDTRRMA 176

Query: 185 QD 186
            +
Sbjct: 177 TE 178


>gi|283781959|ref|YP_003372714.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Pirellula staleyi DSM 6068]
 gi|283440412|gb|ADB18854.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Pirellula staleyi DSM 6068]
          Length = 373

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 58/203 (28%), Gaps = 29/203 (14%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +L  SGG DSS   +        V  +   +G     E     C        +P +K+
Sbjct: 3   RIVLAMSGGVDSSVAAAILTRAGHEVIGVFMRHG-----EEAQAACAVDAPGFQLPIFKE 57

Query: 70  SLGEDH----------------ILPLAILGDISHSSLTKNVAMKIQDNN---LPNTFVPG 110
                                  L +        S   + +   I +      PN  V  
Sbjct: 58  RSDHKQGCCSASDAEDARRVADRLDIPFYALNLQSEFRQIIDYFIDEYTVGRTPNPCVQC 117

Query: 111 RNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPD---CRHDTIRAIETAINLGMESHV- 166
            N +        A  +G   +  G          D   CR       ++ +  G++  + 
Sbjct: 118 NNWLKFGKLFDYADSVGAEFVATGHYARLAQIDGDLALCRGVDDGKDQSYVLFGIKKELL 177

Query: 167 -TVHTPLMWLKKYETWKLAQDIG 188
             +  P+    K +  KLA +IG
Sbjct: 178 PRMLLPIGDYYKPQIRKLAHEIG 200


>gi|258424455|ref|ZP_05687334.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus A9635]
 gi|257845324|gb|EEV69359.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus A9635]
          Length = 431

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 57/188 (30%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++  S G DS   L   L+ +      +  L  ++G R+    E              ++
Sbjct: 15  VVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASNEEA-------------RF 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            ++  + H + L I       SL +N +++ +       +      +        A+ L 
Sbjct: 62  LEAYCDRHHIDLHIKKLDLSHSLNRNNSIQNEARIKRYEWFDEMMNVLEADVLLTAHHLD 121

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    + +   Y      + R       L       ++ PL+ + K E  +  +  
Sbjct: 122 --------DQLETIMYRIFNGKSTRNKLGFDELSKRKGYQIYRPLLAVSKKEIKQFQERY 173

Query: 188 GGQDLVNL 195
                 + 
Sbjct: 174 HIPYFEDE 181


>gi|291296315|ref|YP_003507713.1| GMP synthase large subunit [Meiothermus ruber DSM 1279]
 gi|290471274|gb|ADD28693.1| GMP synthase, large subunit [Meiothermus ruber DSM 1279]
          Length = 508

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 55/187 (29%), Gaps = 17/187 (9%)

Query: 9   PSALLLFSGGQDSST-CLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST  L  A    DR+  +  D+G     E +      + + + +   
Sbjct: 211 EKVLLAVSGGVDSSTLALLLARAIGDRMTAVFVDHGLLRLGERQEVEQALRPLGKALRVV 270

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           + S           L  +       +   K +        V  R    L          G
Sbjct: 271 EASGQ--------FLSALRG---VTDPEQKRKIVGREFIRVFEREARQLSAQGYRWLAQG 319

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                +        G        I++      L  +    +  P  +L K E  +LA  +
Sbjct: 320 TLYPDVIESAGSGEGS-----ANIKSHHNVGGLPEDLQFELLEPFRYLFKDEVRELALLL 374

Query: 188 GGQDLVN 194
           G  + + 
Sbjct: 375 GLPEPIR 381


>gi|203288361|ref|YP_002223411.1| GMP synthase (glutamine-hydrolysing) (glutamine amidotransferase)
           [Borrelia recurrentis A1]
 gi|201085581|gb|ACH95154.1| GMP synthase (glutamine-hydrolysing) (glutamine amidotransferase)
           [Borrelia recurrentis A1]
          Length = 513

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 57/185 (30%), Gaps = 17/185 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +L  SGG DS  C         D +  +  D G   K E    L   KK    +    
Sbjct: 217 KVILGLSGGIDSLVCALLINKAIKDNLICVFVDTGFLRKNEANGILEFNKKYNLNIKHID 276

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            SL     L L  L D+      + +  K          +   +I +L      +  +  
Sbjct: 277 SSL-----LFLTNLRDVDDPEEKRKIIGKTFVEIFEKVALEEDDIKYLAQGTIYSDVIES 331

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                            C    I++      L  + ++ +  PL  L K E  +L   +G
Sbjct: 332 DV-----------KNNVCSSTNIKSHHNVGGLPDKINLNLLEPLRNLFKDEVIQLGVQLG 380

Query: 189 GQDLV 193
            ++ V
Sbjct: 381 LEEEV 385


>gi|157363227|ref|YP_001469994.1| argininosuccinate synthase [Thermotoga lettingae TMO]
 gi|187470633|sp|A8F446|ASSY_THELT RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|157313831|gb|ABV32930.1| Argininosuccinate synthase [Thermotoga lettingae TMO]
          Length = 425

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR 45
             +L +SGG D+S  L W  ++   V     + GQ+
Sbjct: 2  KKVILAYSGGLDTSVILKWLSEKGFEVIAFVANLGQK 38


>gi|71904534|ref|YP_281337.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pyogenes
           MGAS6180]
 gi|71803629|gb|AAX72982.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pyogenes MGAS6180]
          Length = 379

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 50/192 (26%), Gaps = 12/192 (6%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +   +    ++  SGG DSS       ++   V  +             C     +   +
Sbjct: 7   MTDNSKIRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDYKD 64

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +           + +            + +    + +    PN  V     I        
Sbjct: 65  VAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDY 121

Query: 123 AYRLGITNIVIGVCET----DYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLK 176
           A  LG   +  G        +       R       +T     L  E       PL  L+
Sbjct: 122 AMTLGADYVATGHYAQVKRDENGTVHMLRGADNGKDQTYFLSQLSQEQLQKTLFPLGHLQ 181

Query: 177 KYETWKLAQDIG 188
           K E  ++A+  G
Sbjct: 182 KSEVREIAERAG 193


>gi|117926371|ref|YP_866988.1| ExsB family protein [Magnetococcus sp. MC-1]
 gi|117610127|gb|ABK45582.1| ExsB family protein [Magnetococcus sp. MC-1]
          Length = 382

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/199 (11%), Positives = 61/199 (30%), Gaps = 14/199 (7%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE----------LM 64
            SGG DSS     A     R   +  D G  +++ ++    +  ++              
Sbjct: 75  LSGGVDSSYVAWQAHRLGLRPLAVHLDNGWNSELSVQNIEQIVTRLNMDLYTHVLDWNAF 134

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              + +  +  ++ + ++ D +  +L   +A       + +       +   V      +
Sbjct: 135 RDLQRAYLKASVIDIEVITDHAIFALLYRIAG---KKGIKHILSGTNVVTEFVLPPHWIF 191

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK-L 183
             G    +  + +   +            ++  + L  +         +   K E  + +
Sbjct: 192 NKGDHVNIQAIHKAYGTQPLVNYPFMDLRVKKWLQLVKQIRSHSILNWVPYHKAEVKQII 251

Query: 184 AQDIGGQDLVNLILEESHT 202
            Q++G +D      E   T
Sbjct: 252 QQELGWRDYGGKHFESIFT 270


>gi|317009655|gb|ADU80235.1| GMP synthase [Helicobacter pylori India7]
          Length = 508

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 55/182 (30%), Gaps = 20/182 (10%)

Query: 10  SALLLFSGGQDSS---TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             L   SGG DS+   T L  A+   D +  +  D+G   K E E    + K +     +
Sbjct: 211 KVLCAVSGGVDSTVVATLLYRAIK--DNLIAVFVDHGLLRKNEKEKVQAMFKDL-----Q 263

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +  +   + L+ L  +S   L + +            F        L        ++
Sbjct: 264 IPLNTIDAKEIFLSKLKGVSEPELKRKII----GETFIEVFEKEAKKHHLKG------KI 313

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                     +   S         I+       L       +  PL  L K E   L ++
Sbjct: 314 EFLAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEVRLLGKE 373

Query: 187 IG 188
           +G
Sbjct: 374 LG 375


>gi|308183148|ref|YP_003927275.1| GMP synthase [Helicobacter pylori PeCan4]
 gi|308065333|gb|ADO07225.1| GMP synthase [Helicobacter pylori PeCan4]
          Length = 508

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 55/182 (30%), Gaps = 20/182 (10%)

Query: 10  SALLLFSGGQDSS---TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             L   SGG DS+   T L  A+   D +  +  D+G   K E E    + K +     +
Sbjct: 211 KVLCAVSGGVDSTVVATLLYRAIK--DNLIAVFVDHGLLRKNEKEKVQAMFKDL-----Q 263

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +  +   + L+ L  +S   L + +            F        L        ++
Sbjct: 264 IPLNTIDAKEIFLSKLKGVSEPELKRKII----GETFIEVFEKEAKKHHLKG------KI 313

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                     +   S         I+       L       +  PL  L K E   L ++
Sbjct: 314 EFLAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEVRLLGKE 373

Query: 187 IG 188
           +G
Sbjct: 374 LG 375


>gi|257468245|ref|ZP_05632341.1| argininosuccinate synthase [Fusobacterium ulcerans ATCC 49185]
 gi|317062526|ref|ZP_07927011.1| argininosuccinate synthase [Fusobacterium ulcerans ATCC 49185]
 gi|313688202|gb|EFS25037.1| argininosuccinate synthase [Fusobacterium ulcerans ATCC 49185]
          Length = 399

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 60/215 (27%), Gaps = 32/215 (14%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQR---NKVELECRLCVRKKIVE 62
                +L +SGG D+S  + W  + +D  V  ++ D GQ+     VE +       K   
Sbjct: 1   MKEKVVLAYSGGLDTSVIIPWLKENYDFDVIAVAVDVGQKDDFAAVEKKALQIGASKFYA 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
              K  + L  D I+P+   G                              +       +
Sbjct: 61  ADKK--EELVNDFIIPMLKSGAKY--------------EGTYLLGTSIARPVIAKALVEI 104

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A + G + IV G                  A      +       + +      K E   
Sbjct: 105 AQQEGASYIVHGATGKGNDQVRFELGIKALAP-NMKVIAPWRIWDIKSR-----KQEI-- 156

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
              +      + L  +E +T Y    +  +    G
Sbjct: 157 ---EYLKSHGIELPFKE-NTSYSRDENLFHISHEG 187


>gi|225871462|ref|YP_002747409.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus equi subsp. equi 4047]
 gi|254811462|sp|C0MB53|MNMA_STRE4 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|225700866|emb|CAW95613.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus equi subsp. equi 4047]
          Length = 374

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 48/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V  +             C     +  
Sbjct: 2   MTD--NSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDY 57

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 58  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRSGRTPNPDVMCNKEIKFKAFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSGY----PDCRHDTIRAIETAI--NLGMESHVTVHTPLMW 174
             A  LG   +  G                R       +T     L  E       PL  
Sbjct: 115 DYAMTLGADYVATGHYAQIKRDENGVVHMLRGLDKGKDQTYFLSQLSQEQLQKTMFPLGH 174

Query: 175 LKKYETWKLAQDIG 188
           L+K E   +A+  G
Sbjct: 175 LQKSEVRAIAEQAG 188


>gi|189201423|ref|XP_001937048.1| argininosuccinate synthase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|330922655|ref|XP_003299921.1| hypothetical protein PTT_11028 [Pyrenophora teres f. teres 0-1]
 gi|187984147|gb|EDU49635.1| argininosuccinate synthase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|311326191|gb|EFQ91983.1| hypothetical protein PTT_11028 [Pyrenophora teres f. teres 0-1]
          Length = 415

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 38/133 (28%), Gaps = 14/133 (10%)

Query: 7   KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
            +   + L +SGG D+ST L W ++    V     + GQ  +   +       KI  L  
Sbjct: 1   MSKGRVCLAYSGGLDTSTILKWLIEEGYEVVCFLANVGQ--EEPWDEVEKKALKIGAL-- 56

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                     ++ L +  +       + V                   +       +A +
Sbjct: 57  ---------KMVILDLQKEFVEELCFRAVQCNASYEGRYLLGTSLARPVIARAQIRVAQQ 107

Query: 126 LGITNIVIGVCET 138
            G   +  G    
Sbjct: 108 EGCGFVSHGCTGK 120


>gi|167753427|ref|ZP_02425554.1| hypothetical protein ALIPUT_01701 [Alistipes putredinis DSM 17216]
 gi|167658052|gb|EDS02182.1| hypothetical protein ALIPUT_01701 [Alistipes putredinis DSM 17216]
          Length = 511

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 52/186 (27%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G   K E +  L   K +       
Sbjct: 214 DRVVLGLSGGVDSSVAAVLLHRAIGKNLYCIFVDSGLLRKNEFDSVLESYKGMG-----L 268

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                + H   L  L  ++     + +  +              N+ +L           
Sbjct: 269 NVKGVKAHDRFLGDLAGVTDPEKKRKIIGRDFVEVFNAEAKQIENVKWL----------- 317

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
               +        S         I++      L  E H+ +  PL  L K E  ++ + +
Sbjct: 318 AQGTIYPDVVESASASVKGPAAMIKSHHNVGGLPEEMHLKIVEPLRLLFKDEVRRVGKSL 377

Query: 188 GGQDLV 193
           G    +
Sbjct: 378 GIDPQL 383


>gi|153806905|ref|ZP_01959573.1| hypothetical protein BACCAC_01181 [Bacteroides caccae ATCC 43185]
 gi|149131582|gb|EDM22788.1| hypothetical protein BACCAC_01181 [Bacteroides caccae ATCC 43185]
          Length = 301

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 58/191 (30%), Gaps = 10/191 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             ++ FSGG+DS  CL  A +++  D++E +  D G  +    +    V K++   +   
Sbjct: 2   KIIVSFSGGKDSQACLIQAANKYGADKIEAVFCDTGWEHPETYQHISDVCKQLDVKLVVL 61

Query: 68  KDSLGEDHI---LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA- 123
           +     D +   +  +          T  + +K   + + +   P   I  +    +   
Sbjct: 62  RSKKYTDFVDMSIKRSRFPSSQRRFCTSELKIKPMIDYILSLTEPCVIIQGIRAKESEER 121

Query: 124 ----YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
               Y            + +  G            +  +        +V  P+      E
Sbjct: 122 AKLPYECNYFGEYYERIKKNRKGKIVEVWKQDYRRKDVLKWCEHYDASVSRPIFQWSAQE 181

Query: 180 TWKLAQDIGGQ 190
                   G +
Sbjct: 182 VINHILSAGQK 192


>gi|258646844|ref|ZP_05734313.1| argininosuccinate synthase [Dialister invisus DSM 15470]
 gi|260404282|gb|EEW97829.1| argininosuccinate synthase [Dialister invisus DSM 15470]
          Length = 414

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 29/73 (39%), Gaps = 7/73 (9%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQR------NKVELECRLCVR 57
          + +    +L +SGG D+S  + W  + +   V   + + GQ       ++  L+    V 
Sbjct: 1  MNEIKKVVLAYSGGLDTSVIIPWLKENYNCEVIACTINLGQPEDFDAIHEKALKSGASVA 60

Query: 58 KKIVELMPKWKDS 70
          + +       ++ 
Sbjct: 61 ETLDVRREFIEEY 73


>gi|239908960|ref|YP_002955702.1| hypothetical protein DMR_43250 [Desulfovibrio magneticus RS-1]
 gi|239798827|dbj|BAH77816.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 355

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 3/46 (6%)

Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECR 53
          AL LFSGG DS         +   V  L F    +G+ +K++    
Sbjct: 6  ALALFSGGLDSILAAKTIAAQGLDVLCLHFVSPYFGKPHKIDHWRA 51


>gi|162147641|ref|YP_001602102.1| argininosuccinate synthase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209542270|ref|YP_002274499.1| argininosuccinate synthase [Gluconacetobacter diazotrophicus PAl 5]
 gi|189046390|sp|A9HIQ4|ASSY_GLUDA RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|161786218|emb|CAP55800.1| Argininosuccinate synthase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209529947|gb|ACI49884.1| Argininosuccinate synthase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 409

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 49/157 (31%), Gaps = 7/157 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +K     +L +SGG D+S  L W        V T + D GQ  ++E        +K  E+
Sbjct: 3   VKDVKKVVLAYSGGLDTSVILRWLQTTYGCEVVTFTADLGQGEELEP------ARKKAEM 56

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
               +  + +     +         + T      +   ++    +  R I         A
Sbjct: 57  FGVKEIFVEDLRETFVKDFVFPMFRANTLYEGQYLLGTSIARPLIAQRQIEIAEAVGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         + + Y      T+ +     +L
Sbjct: 117 VAHGATGKGNDQVRFELAYYALKPDVTVISPWREWDL 153


>gi|149183668|ref|ZP_01862082.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Bacillus sp. SG-1]
 gi|148848616|gb|EDL62852.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Bacillus sp. SG-1]
          Length = 155

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/161 (9%), Positives = 42/161 (26%), Gaps = 10/161 (6%)

Query: 5   IKKAPS---ALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKI 60
           +KK P     ++  SGG DSS       ++   V  +   ++   ++  +       + +
Sbjct: 1   MKKEPKDTRVVVGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVCTATEDYEDV 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           + +  +            +           T  +             +     I      
Sbjct: 61  IRVCNQIGIPYYA-----VNFEKQYWDKVFTYFLDEYKAGRTPNPDVMC-NKEIKFKAFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
             A +LG   +  G          + +   ++       + 
Sbjct: 115 EHAMKLGADYLATGHYAQVEYRDGEYKMLRVKDSNKTKRIS 155


>gi|94991468|ref|YP_599568.1| tRNA-specific 2-thiouridylase MnmA [Streptococcus pyogenes
           MGAS10270]
 gi|94544976|gb|ABF35024.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pyogenes MGAS10270]
          Length = 379

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 48/192 (25%), Gaps = 12/192 (6%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +   +    ++  SGG DSS       ++   V  +             C     +   +
Sbjct: 7   MTDNSKIRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDYKD 64

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +           + +            + +    + +    PN  V     I        
Sbjct: 65  VAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDY 121

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMWLK 176
           A  LG   +  G             +    A            L  E       PL  L+
Sbjct: 122 AMTLGADYVATGHYAQVKRDENGTVYMLRGADNGKDQTYFLSQLSQEQLQKTLFPLGHLQ 181

Query: 177 KYETWKLAQDIG 188
           K E  ++A+  G
Sbjct: 182 KSEVREIAERAG 193


>gi|226289087|gb|EEH44599.1| argininosuccinate synthase [Paracoccidioides brasiliensis Pb18]
          Length = 413

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 3/75 (4%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          +       L +SGG D+S  L+W +++   V     D GQ    E       +  ++   
Sbjct: 1  MPAKEKVCLAYSGGLDTSCILAWLIEQGYDVVCFLADVGQ---AEDFKEAERKALLIGAQ 57

Query: 65 PKWKDSLGEDHILPL 79
                L  + +  L
Sbjct: 58 KLVVADLKREFVEDL 72


>gi|261855295|ref|YP_003262578.1| argininosuccinate synthase [Halothiobacillus neapolitanus c2]
 gi|261835764|gb|ACX95531.1| argininosuccinate synthase [Halothiobacillus neapolitanus c2]
          Length = 408

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 49/159 (30%), Gaps = 13/159 (8%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVE-- 62
            +    +L +SGG D+S  L W  D     V T + D GQ +++E        +K+    
Sbjct: 5   SEFKKVVLAYSGGLDTSVILKWLEDTYGCEVVTFTADLGQGDELEP--ARIKAQKMGVKQ 62

Query: 63  -LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
             +   ++    D++ P+     +         ++           +  R +        
Sbjct: 63  IFIEDLREEFIRDYVFPMFRANAVYEGEYLLGTSIARP-------LIAKRLVDIANQTGA 115

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
            A   G T         +   Y       + A     +L
Sbjct: 116 DAIAHGATGKGNDQVRFELGAYALKPGIKVIAPWREWDL 154


>gi|254283074|ref|ZP_04958042.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [gamma
           proteobacterium NOR51-B]
 gi|219679277|gb|EED35626.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [gamma
           proteobacterium NOR51-B]
          Length = 363

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/176 (12%), Positives = 38/176 (21%), Gaps = 5/176 (2%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +      ++  SGG DSS       D   RVE L     + +     C    ++ + +  
Sbjct: 3   LNANTKVIVGMSGGVDSSVSALLLRDAGYRVEGLFMKNWEEDDGTEYC--TAKEDLADAS 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     H        +   +     ++            +  R  I        A 
Sbjct: 61  SVADRLGIPLH--EANFAAEYWDNVFEHFLSEYRAGRTPNPDILCNRE-IKFRAFIDYAT 117

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            LG   I  G                        +  +     V          E 
Sbjct: 118 LLGADCIATGHYVRRGHFESKATLLKGLDTNKDQSYFLHQVGNVELGRTLFPVGEI 173


>gi|169619928|ref|XP_001803376.1| hypothetical protein SNOG_13164 [Phaeosphaeria nodorum SN15]
 gi|111058371|gb|EAT79491.1| hypothetical protein SNOG_13164 [Phaeosphaeria nodorum SN15]
          Length = 415

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 38/133 (28%), Gaps = 14/133 (10%)

Query: 7   KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
            +   + L +SGG D+ST L W ++    V     + GQ  +   +       KI  L  
Sbjct: 1   MSKGRVCLAYSGGLDTSTILKWLIEEGYEVVCFLANVGQ--EEPWDEVEKKALKIGAL-- 56

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                     ++ L +  +       + V                   +       +A +
Sbjct: 57  ---------KMVILDLQKEFVEELCFRAVQCNASYEGRYLLGTSLARPVIARAQIRVAQQ 107

Query: 126 LGITNIVIGVCET 138
            G   +  G    
Sbjct: 108 EGCGFVSHGCTGK 120


>gi|319956181|ref|YP_004167444.1| gmp synthase (glutamine-hydrolyzing) [Nitratifractor salsuginis DSM
           16511]
 gi|319418585|gb|ADV45695.1| GMP synthase (glutamine-hydrolyzing) [Nitratifractor salsuginis DSM
           16511]
          Length = 514

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 52/184 (28%), Gaps = 18/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS   +   +   D++  +  D G   K E +    + K++   +   
Sbjct: 218 KKVLCGVSGGVDSSVVAALLHEAIGDQLIAVFVDTGLLRKNEAQQVQDMFKQLGIDLITV 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             S        L+ L  ++     + +  +                         A  + 
Sbjct: 278 DASEK-----FLSRLKGVTDPERKRKIIGETFIEVFDEEAKK------------HADEVS 320

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    +   S        TI++      L       +  PL  + K E  KL  ++
Sbjct: 321 FLAQGTLYTDVIESVSVKGPSKTIKSHHNVGGLPEWMTFELVEPLREIFKDEVRKLGLEL 380

Query: 188 GGQD 191
           G   
Sbjct: 381 GLPK 384


>gi|15837601|ref|NP_298289.1| argininosuccinate synthase [Xylella fastidiosa 9a5c]
 gi|24211536|sp|Q9PEM9|ASSY_XYLFA RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|9105933|gb|AAF83809.1|AE003937_13 argininosuccinate synthase [Xylella fastidiosa 9a5c]
          Length = 401

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 1/60 (1%)

Query: 7  KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +   ++L FSGG D+S C+ +  ++   V T+  D G  N+ E +       ++     
Sbjct: 1  MSKKNIVLAFSGGLDTSFCIPYLKEQGYAVHTVFADTGGVNEEERDFIEKRAAELGVASH 60


>gi|322513772|ref|ZP_08066859.1| sulfate adenylyltransferase subunit 2 [Actinobacillus ureae ATCC
           25976]
 gi|322120403|gb|EFX92329.1| sulfate adenylyltransferase subunit 2 [Actinobacillus ureae ATCC
           25976]
          Length = 308

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 52/182 (28%), Gaps = 18/182 (9%)

Query: 13  LLFSGGQDSSTCLSWALD----RFDRVE----TLSFDYGQRNKVELECRLCVRKKIVELM 64
           LLFSGG+DS   L+ A          +      +  D G      ++ R    KK+    
Sbjct: 35  LLFSGGKDSVVLLALARKAFQLEGRDLVLPFPLVHIDTGHNYPEVIQFRDEQVKKLNA-- 92

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            K      ED I+   ++      S     A+ + +    N F               A 
Sbjct: 93  -KLVVGHVEDSIVKGTVVLRKETDSRNSAQAVTLLETIEANGFDALMGGARRDEEKARAK 151

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                 I     E         R +        ++ G    V    P+    + + W+  
Sbjct: 152 ER----IFSFRDEFGQWDPKAQRPELWSLYNAKLHKGENMRV---FPISNWTELDIWQYI 204

Query: 185 QD 186
           + 
Sbjct: 205 ER 206


>gi|288925153|ref|ZP_06419088.1| argininosuccinate synthase [Prevotella buccae D17]
 gi|288337918|gb|EFC76269.1| argininosuccinate synthase [Prevotella buccae D17]
          Length = 402

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 43/154 (27%), Gaps = 13/154 (8%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M +   K    ++ FSGG D+S  +         V     + G  +  +L+       K+
Sbjct: 1   MAE--NKKKKVVVAFSGGLDTSYTVMKLSQDGWEVYAACANTGGFSAEQLKTNEENAYKL 58

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                           + L +  +    SL   +   +  NN     V    I   +  A
Sbjct: 59  GAKAY-----------VTLDVTQEYYEKSLKYMIFGNVLRNNCYPISVSSERIFQAIAIA 107

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAI 154
             A  +G   I  G                + A 
Sbjct: 108 RYAKEIGADAIAHGSTGAGNDQIRFDMTFLVMAP 141


>gi|148656262|ref|YP_001276467.1| tRNA-specific 2-thiouridylase MnmA [Roseiflexus sp. RS-1]
 gi|205816909|sp|A5UV64|MNMA_ROSS1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|148568372|gb|ABQ90517.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Roseiflexus sp. RS-1]
          Length = 373

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 40/138 (28%), Gaps = 2/138 (1%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS   +   +    V  ++    + +   L   LC  +++ E   +   
Sbjct: 3   KIMVAMSGGVDSSLAAALLHEAGHDVTGVTLHLWEGDDDRLAESLCCSQEMTESARRVCA 62

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG  + +            + +    +      PN  +     I        A  LG  
Sbjct: 63  QLGIPYYVF--NYQREFRRYVIEYFLREYASGFTPNPCLECNREIKFRALLARARTLGFD 120

Query: 130 NIVIGVCETDYSGYPDCR 147
            +  G      +      
Sbjct: 121 YVATGHYARIRADETRHN 138


>gi|219848571|ref|YP_002463004.1| GMP synthase [Chloroflexus aggregans DSM 9485]
 gi|219542830|gb|ACL24568.1| GMP synthase, large subunit [Chloroflexus aggregans DSM 9485]
          Length = 513

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 47/186 (25%), Gaps = 17/186 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +   SGG DS+           DR+  +  D G     E                
Sbjct: 214 PHGRVICALSGGVDSAVAALIIHHAIGDRLTCVFVDNGLLRAGE--------------AE 259

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +  ++  E   +PL  +             +  +           R       +      
Sbjct: 260 QVINTFREHFHVPLIAVDAREEFLAALEGVVDPEQKRKIIGEKFIRIFEREARSLADVEF 319

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           L    +   V E+     P      I+       L  +  + +  PL +L K E      
Sbjct: 320 LAQGTLYPDVIESTAPDRPKA--AKIKTHHNVGGLPADMQLKLVEPLRYLFKDEVRAAGL 377

Query: 186 DIGGQD 191
            +G  +
Sbjct: 378 QLGLPE 383


>gi|84489373|ref|YP_447605.1| ATPase [Methanosphaera stadtmanae DSM 3091]
 gi|84372692|gb|ABC56962.1| predicted ATPase of PP-loop superfamily [Methanosphaera
          stadtmanae DSM 3091]
          Length = 231

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 19/29 (65%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
           +++L+SGG+DS+  L  AL+  D +  L
Sbjct: 2  KSVILYSGGKDSTMALYHALENGDDIYAL 30


>gi|304321760|ref|YP_003855403.1| argininosuccinate synthase [Parvularcula bermudensis HTCC2503]
 gi|303300662|gb|ADM10261.1| argininosuccinate synthase [Parvularcula bermudensis HTCC2503]
          Length = 402

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/152 (13%), Positives = 38/152 (25%), Gaps = 10/152 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +   +L FSGG D+S C+         V T   D                +++     +
Sbjct: 1   MSQKVVLAFSGGLDTSYCVLALKKAGYEVITYFVD-----TAGPGSAEASPEEVAARAKE 55

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H +  +    +    +   +                R +I       LA  +
Sbjct: 56  LGA--VDHHNIEAS--QRLWDGIVVPLIQAGEWRQGRYPLLCADRYLIVEAGIE-LAKSV 110

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAI 158
           G   I  G            R     +    +
Sbjct: 111 GAGAIAHGCTGMGNDQVRFDRSARALSDLEVL 142


>gi|332157834|ref|YP_004423113.1| hypothetical protein PNA2_0192 [Pyrococcus sp. NA2]
 gi|331033297|gb|AEC51109.1| hypothetical protein PNA2_0192 [Pyrococcus sp. NA2]
          Length = 260

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
               L+LFSGG+DSS  L         V  L+F
Sbjct: 19 NQEKILVLFSGGKDSSLTLYLLKRAGLDVAALTF 52


>gi|325474270|gb|EGC77458.1| GMP synthase [Treponema denticola F0402]
          Length = 514

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 52/190 (27%), Gaps = 24/190 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K    LL  SGG DSS   +         +  +  D+G   K E +      +       
Sbjct: 218 KDGKVLLALSGGVDSSVLAALLNRAVGKNLTCIFVDHGLMRKNEGDEVEAAFRDAPMNFI 277

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +               LG +   S  +     I +               +      A +
Sbjct: 278 RVNAES--------RFLGKLKGVSDPEKKRKIIGEEF-------------IRVFEEEAEK 316

Query: 126 LG-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-VHTPLMWLKKYETWKL 183
           +G +  +  G    D           I++      L        +  PL  L K E   L
Sbjct: 317 IGTVDFLAQGTIYADIVESGTKGSAVIKSHHNVGGLPDHISFKSLIEPLKTLFKDEIRNL 376

Query: 184 AQDIGGQDLV 193
             ++G  D +
Sbjct: 377 GTELGLPDYL 386


>gi|325958352|ref|YP_004289818.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methanobacterium sp. AL-21]
 gi|325329784|gb|ADZ08846.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Methanobacterium sp. AL-21]
          Length = 363

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
           ++K   A++  SGG DSS  L  A         ++ D G
Sbjct: 162 MEKDHKAIVALSGGVDSSFSLIVAKLLGFNPVAVTVDPG 200


>gi|262277406|ref|ZP_06055199.1| GMP synthase [glutamine-hydrolyzing] (Glutamineamidotransferase)
           (GMP synthetase) [alpha proteobacterium HIMB114]
 gi|262224509|gb|EEY74968.1| GMP synthase [glutamine-hydrolyzing] (Glutamineamidotransferase)
           (GMP synthetase) [alpha proteobacterium HIMB114]
          Length = 520

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 53/191 (27%), Gaps = 17/191 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +KK    L   SGG DSS      L      +  +  D G     E E       KI   
Sbjct: 219 VKKNEKILCALSGGVDSSVLAHLLLKAVKKNLVCVYVDTGLMRLGETEE----INKIFSK 274

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
             K      +   + L  L +I      + +          N     +NI FL       
Sbjct: 275 KFKKIFYKIDAKKIFLKKLKNIHDPEKKRKIIGNTFIKIFENFTKRKKNIKFLAQGT--- 331

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
                    +     +   +       I++      L  +  + +  P   + K E  K+
Sbjct: 332 ---------LYPDLIESKSFSGSPTSIIKSHHNVGGLPKKMKLKLIEPFNEMFKDEVRKI 382

Query: 184 AQDIGGQDLVN 194
            + +     + 
Sbjct: 383 GKSLKVNKFLI 393


>gi|91772138|ref|YP_564830.1| GMP synthase subunit B [Methanococcoides burtonii DSM 6242]
 gi|121689431|sp|Q12ZP6|GUAAB_METBU RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
           AltName: Full=GMP synthetase
 gi|91711153|gb|ABE51080.1| GMP synthase (glutamine-hydrolyzing) subunit B [Methanococcoides
           burtonii DSM 6242]
          Length = 304

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 60/202 (29%), Gaps = 16/202 (7%)

Query: 8   APSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCV---------- 56
               ++  SGG DSS C   A     D +  +  D G   K E E    +          
Sbjct: 20  KGKTIIALSGGVDSSVCAVLAYQAIKDDLIPIYIDTGLMRKGETERIKEIFADMNLQTID 79

Query: 57  -RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
            + + ++ +   KD   +  ++    +      +   N    IQ    P+       I  
Sbjct: 80  AKDRFLDALVGIKDPEEKRKVVGETFIRVFEEEAREINAQYLIQGTIYPDRIESDGGIKS 139

Query: 116 LVFAATLAYRL---GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
                 L   +   GI   +  + + +               E     G    V +    
Sbjct: 140 HHNVGGLPEHIDFKGIIEPIDDLYKDEVREVAWALDLPEEICERMPFPGPGLSVRII-GE 198

Query: 173 MWLKKYETWKLAQDIGGQDLVN 194
           +  +K +  + A  I  ++L+ 
Sbjct: 199 VTEEKVDVVREANAIVEEELLE 220


>gi|58038730|ref|YP_190694.1| argininosuccinate synthase [Gluconobacter oxydans 621H]
 gi|81672747|sp|Q5FUA8|ASSY_GLUOX RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|58001144|gb|AAW60038.1| Argininosuccinate synthase [Gluconobacter oxydans 621H]
          Length = 410

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 46/153 (30%), Gaps = 7/153 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L +SGG D+S  L W    +   V T + D GQ  ++E        +K  E+    
Sbjct: 8   KKVVLAYSGGLDTSVILRWLQKTYNCEVVTFTADLGQGEELEP------ARKKAEMFGVK 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +  + +     +         + T      +   ++    +  R I         A   G
Sbjct: 62  EIFVEDLRETFVKDFVFPMFRANTLYEGQYLLGTSIARPLIAQRQIEIAEAVGADAVAHG 121

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
            T         +   Y       + A     +L
Sbjct: 122 ATGKGNDQVRFELGYYSLKPDVKVIAPWREWDL 154


>gi|294140155|ref|YP_003556133.1| GMP synthase [Shewanella violacea DSS12]
 gi|293326624|dbj|BAJ01355.1| GMP synthase [Shewanella violacea DSS12]
          Length = 525

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 51/181 (28%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS           D++  +  D G     E                +  D
Sbjct: 230 VILGLSGGVDSSVVAMLLHRAIGDKLTCVFVDNGLLRLNE--------------AEQVMD 275

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+   L +  +   +          + +        V              A  L   
Sbjct: 276 MFGDHFGLKIIHVNAENRFLDAMKGEAEPEAKRKIIGRVFVEIFDEESKKCANAKWLAQG 335

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S         I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 336 TIYPDVIESAGSATGKAHV--IKSHHNVGGLPDDMDLGLVEPLRELFKDEVRKIGLELGL 393

Query: 190 Q 190
            
Sbjct: 394 P 394


>gi|291277103|ref|YP_003516875.1| putative tRNA methyltransferase [Helicobacter mustelae 12198]
 gi|290964297|emb|CBG40147.1| putative tRNA methyltransferase [Helicobacter mustelae 12198]
          Length = 346

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          + LFSGG DS   +    D+   V  L F+ G
Sbjct: 1  MALFSGGLDSLISMKLLKDQNIEVIALHFNIG 32


>gi|320589915|gb|EFX02371.1| argininosuccinate synthase [Grosmannia clavigera kw1407]
          Length = 414

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 40/135 (29%), Gaps = 16/135 (11%)

Query: 5   IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + K    + L +SGG D+S  L W L++   V     + GQ             ++  + 
Sbjct: 1   MSKGK--VCLAYSGGLDTSCILKWLLEQGYEVVCFLANVGQ-------------EEDWDA 45

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +      LG   ++ + +  +         +    Q              +       +A
Sbjct: 46  VKAKSAKLGASKMIIVDLCKEFVEQLCFPAIQCNAQYEGRYLLGTSLARPVIARAQMRVA 105

Query: 124 YRLGITNIVIGVCET 138
            + G   +  G    
Sbjct: 106 KQEGCDYVSHGCTGK 120


>gi|310778067|ref|YP_003966400.1| Queuosine synthesis [Ilyobacter polytropus DSM 2926]
 gi|309747390|gb|ADO82052.1| Queuosine synthesis [Ilyobacter polytropus DSM 2926]
          Length = 329

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 7/74 (9%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVET---LSFDYGQRNKVELECRLCVRKKIVELMPK 66
           AL LFSGG DS+  +   +D+   V     +S  +G +     E    + +++   +  
Sbjct: 2  RALALFSGGLDSALAIKVVVDQGIEVIALNFVSHFFGGK----NEKAEKMAEQLGVRLEY 57

Query: 67 WKDSLGEDHILPLA 80
             S     IL  +
Sbjct: 58 VDFSKIHTEILKES 71


>gi|307244970|ref|ZP_07527067.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|307253923|ref|ZP_07535775.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|307258377|ref|ZP_07540118.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Actinobacillus pleuropneumoniae serovar 11 str. 56153]
 gi|306854135|gb|EFM86343.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|306863127|gb|EFM95069.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|306867561|gb|EFM99408.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Actinobacillus pleuropneumoniae serovar 11 str. 56153]
          Length = 389

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 50/188 (26%), Gaps = 9/188 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +  +VE L      +N  E +              
Sbjct: 27  NAKKKVIIGMSGGVDSSVSAFILQQQGYQVEGLFM----KNWEEDDDTDYCTAAADLADA 82

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +      +  +  +    +   +     +             +  + I F  F    A  
Sbjct: 83  QAVADKLDMKLHKINFAAEYWDNVFEHFLNEYKAGRTPNPDILCNKEIKFKAFLEYAAED 142

Query: 126 LGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           LG   I  G          + +                 L  +       P+  ++K   
Sbjct: 143 LGADYIATGHYVRRSGDDNNAQLLRGLDANKDQSYFLYTLSHKQVGQSLFPVGDIEKPIV 202

Query: 181 WKLAQDIG 188
            ++A+D+G
Sbjct: 203 RQIAEDLG 210


>gi|257465382|ref|ZP_05629753.1| sulfate adenylyltransferase subunit 2 [Actinobacillus minor 202]
 gi|257451042|gb|EEV25085.1| sulfate adenylyltransferase subunit 2 [Actinobacillus minor 202]
          Length = 308

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 48/182 (26%), Gaps = 18/182 (9%)

Query: 13  LLFSGGQDSSTCLSWALD----RFDRVE----TLSFDYGQRNKVELECRLCVRKKIVELM 64
           LLFSGG+DS   L+ A          +      +  D G      ++ R    KK+    
Sbjct: 35  LLFSGGKDSVVLLALARKAFQLEGRELVLPFPLVHIDTGHNYPEVIQFRDEQVKKLNA-- 92

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L   H+      G +     T +         L      G + +          
Sbjct: 93  -----KLVIGHVEDSIEKGTVVLRKETDSRNAAQAVTLLETIEANGFDALMGGARRDEEK 147

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                 I     E         R +        ++ G    V    P+    + + W+  
Sbjct: 148 ARAKERIFSFRDEFGQWDPKAQRPELWSLYNAKLHKGENMRV---FPISNWTELDIWQYI 204

Query: 185 QD 186
           + 
Sbjct: 205 ER 206


>gi|147919832|ref|YP_686419.1| hypothetical protein RCIX1925 [uncultured methanogenic archaeon
           RC-I]
 gi|110621815|emb|CAJ37093.1| conserved hypothetical protein [uncultured methanogenic archaeon
           RC-I]
          Length = 377

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 30/86 (34%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           KK    ++  SGG+DS+  L  A+    R   + FD G  + + +        ++   + 
Sbjct: 64  KKEYDCVVGVSGGRDSTYVLYNAIKLGLRPLAVHFDNGWNSDIAVSNIKRATTRLNVDLH 123

Query: 66  KWKDSLGEDHILPLAILGDISHSSLT 91
                  E   L  + L      +  
Sbjct: 124 TVVADWEEFKDLQKSFLKASVSDAEI 149


>gi|49474995|ref|YP_033036.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Bartonella henselae str. Houston-1]
 gi|81648415|sp|Q6G5J3|GUAA_BARHE RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|49237800|emb|CAF26994.1| GMP synthetase [Bartonella henselae str. Houston-1]
          Length = 518

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 56/185 (30%), Gaps = 18/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS       +   D++  +  D+G   K E        ++++ L   
Sbjct: 221 KSRVICGLSGGVDSSVVAVLLHEAIGDQLTCILVDHGLMRKNE-------AQEVLTLFR- 272

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + + + L  +   +         +  +        +              A  L
Sbjct: 273 ------DHYNIKLIHVNAANMFLNALEGEIDPEKKRKTIGRLFIEVFEEETKKIGGAEFL 326

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+  +         I++      L    ++ +  PL  L K E   L ++
Sbjct: 327 AQGTLYPDVIESISAIGKSVT---IKSHHNVGGLPERMNMKLVEPLRELFKDEVRSLGKE 383

Query: 187 IGGQD 191
           +G  +
Sbjct: 384 LGLPE 388


>gi|313884882|ref|ZP_07818634.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619573|gb|EFR31010.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Eremococcus coleocola ACS-139-V-Col8]
          Length = 374

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 53/192 (27%), Gaps = 13/192 (6%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVE 62
           + +K    ++  SGG DSS       +    V  L   ++   ++  +       K +  
Sbjct: 1   MTEKKARVIVGMSGGVDSSVAALLLKEAGYDVIGLFMKNWDDTDENGVCTATEDYKDVAL 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +  K                       + +    + +    PN  V     I        
Sbjct: 61  VAEKIGIPYYS------VNFEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDY 114

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRH------DTIRAIETAINLGMESHVTVHTPLMWLK 176
           A  LG   + +G      +      H      D          L  +       PL  L+
Sbjct: 115 AMDLGADYVAMGHYAQVETDADGTVHLLRGLDDNKDQTYFLSQLSQDQLKKSLFPLGHLQ 174

Query: 177 KYETWKLAQDIG 188
           K +  ++A+  G
Sbjct: 175 KSQVREIAEKAG 186


>gi|311069430|ref|YP_003974353.1| argininosuccinate synthase [Bacillus atrophaeus 1942]
 gi|310869947|gb|ADP33422.1| argininosuccinate synthase [Bacillus atrophaeus 1942]
          Length = 403

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          + +    +L +SGG D+S  + W  ++   V     D G
Sbjct: 1  MAEQKKVVLAYSGGLDTSVAIKWLQEQGYDVIACCLDVG 39


>gi|229827773|ref|ZP_04453842.1| hypothetical protein GCWU000182_03165 [Abiotrophia defectiva ATCC
           49176]
 gi|229787972|gb|EEP24086.1| hypothetical protein GCWU000182_03165 [Abiotrophia defectiva ATCC
           49176]
          Length = 514

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 44/187 (23%), Gaps = 16/187 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS            ++  +  D+G            +RK   + +  
Sbjct: 215 NGKVLCALSGGVDSSVAAVLLSKAVGKQLTCVFVDHG-----------LLRKNEGDEVEA 263

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G   +  + +            V    +           R              L
Sbjct: 264 VFGPDGSYELNFIRVNAQQRFYDKLAGVTEP-ETKRKIIGEEFIRVFEEEAKKIGTVDYL 322

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E   SG                         +  PL  L K E  K+  +
Sbjct: 323 VQGTIYPDVVE---SGVGGESVVIKSHHNVGGLPDYVDFKEIIEPLRNLFKDEVRKVGLE 379

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 380 LGIPERL 386


>gi|269926075|ref|YP_003322698.1| GMP synthase, large subunit [Thermobaculum terrenum ATCC BAA-798]
 gi|269789735|gb|ACZ41876.1| GMP synthase, large subunit [Thermobaculum terrenum ATCC BAA-798]
          Length = 531

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 51/183 (27%), Gaps = 17/183 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS   +       DR+  +  + G    + L     V   + +      
Sbjct: 235 KVICALSGGVDSSVAATLIHKAIGDRLVCIFVNNG---LLRLNEAEEVLGVLRDQQHLNI 291

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             +       L+ L  +             ++          R              L  
Sbjct: 292 RYVDATDRF-LSALHGVMD----------PEEKRKRIGECFIRVFEEEASKLGEIEFLAQ 340

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+  +         I+       L  +    +  PL +L K E  ++ +++G
Sbjct: 341 GTLYPDVIESATADTKA--AAKIKTHHNVGGLPPDLKFKLLEPLKYLFKDEVREVGKNLG 398

Query: 189 GQD 191
             D
Sbjct: 399 LPD 401


>gi|219559055|ref|ZP_03538131.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycobacterium tuberculosis T17]
          Length = 396

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 39/176 (22%), Gaps = 4/176 (2%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL-MPKWKDSLGE 73
            SGG DSS   +  +D    V  +                    K       +  D LG 
Sbjct: 1   MSGGVDSSVAAARMVDAGHEVVGVHMALSTAPGTLRTGSRGCCSKEDAADARRVADVLGI 60

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
              +      +     +  +          PN  V     I     +  A  LG   +  
Sbjct: 61  PFYVW--DFAEKFKEDVINDFVSSYARGETPNPCVRCNQQIKFAALSARAVALGFDTVAT 118

Query: 134 GVCETDYSGY-PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
           G       G                  L  +       P+    K +    A   G
Sbjct: 119 GHYARLSGGRLRRAVDRDKDQSYVLAVLTAQQLRHAAFPIGDTPKRQIRAEAARRG 174


>gi|215431975|ref|ZP_03429894.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycobacterium tuberculosis EAS054]
 gi|289755139|ref|ZP_06514517.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TrmU
           [Mycobacterium tuberculosis EAS054]
 gi|308375963|ref|ZP_07445668.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis SUMu007]
 gi|308377199|ref|ZP_07441475.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis SUMu008]
 gi|289695726|gb|EFD63155.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TrmU
           [Mycobacterium tuberculosis EAS054]
 gi|308344583|gb|EFP33434.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis SUMu007]
 gi|308348530|gb|EFP37381.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmU
           [Mycobacterium tuberculosis SUMu008]
          Length = 361

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 39/176 (22%), Gaps = 4/176 (2%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL-MPKWKDSLGE 73
            SGG DSS   +  +D    V  +                    K       +  D LG 
Sbjct: 1   MSGGVDSSVAAARMVDAGHEVVGVHMALSTAPGTLRTGSRGCCSKEDAADARRVADVLGI 60

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
              +      +     +  +          PN  V     I     +  A  LG   +  
Sbjct: 61  PFYVW--DFAEKFKEDVINDFVSSYARGETPNPCVRCNQQIKFAALSARAVALGFDTVAT 118

Query: 134 GVCETDYSGY-PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
           G       G                  L  +       P+    K +    A   G
Sbjct: 119 GHYARLSGGRLRRAVDRDKDQSYVLAVLTAQQLRHAAFPIGDTPKRQIRAEAARRG 174


>gi|196019728|ref|XP_002119029.1| hypothetical protein TRIADDRAFT_35073 [Trichoplax adhaerens]
 gi|190577245|gb|EDV18485.1| hypothetical protein TRIADDRAFT_35073 [Trichoplax adhaerens]
          Length = 345

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/187 (11%), Positives = 48/187 (25%), Gaps = 16/187 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DS+   +        ++  +  D G     E+E      K        
Sbjct: 46  HKKVVLGLSGGVDSTVVATLLNKAIGKQLYCIFVDNGLLRSNEVEEVEKSLK-------- 97

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +   +  I+  +       S L++   +   +                          
Sbjct: 98  -DNFDLQIRIIDAS------ESFLSELKNVTDPEEKRKIIGRVFIETFQKAIKEIDDVEY 150

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                +        +     +                 ++ +  PL  L K E  +L ++
Sbjct: 151 LAQGTIYPDVIESAATSTGKKVTIKSHHNVGGLPEDMGNLKLIEPLKLLFKDEVRRLGKE 210

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 211 LGVPNSI 217


>gi|225010099|ref|ZP_03700571.1| Argininosuccinate synthase [Flavobacteria bacterium MS024-3C]
 gi|225005578|gb|EEG43528.1| Argininosuccinate synthase [Flavobacteria bacterium MS024-3C]
          Length = 395

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/198 (9%), Positives = 48/198 (24%), Gaps = 6/198 (3%)

Query: 9   PSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQ-----RNKVELECRLCVRKKIVE 62
              +L +SGG D S      + +    V  ++ + G       +++E +           
Sbjct: 2   KKLVLAYSGGLDTSYCAKYLSAEMGFEVHAVTVNTGGFDPVDLHEMEEKAIALGAHAFKA 61

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +             L    +   +   L+ +    +Q   L +             +   
Sbjct: 62  IDGVEIFYQKVVKYLIFGNILKNNTYPLSVSAERIVQALELISYAKEVGASHIAHGSTGA 121

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
                  +++  V   +       R   +   +    L  +          +      W 
Sbjct: 122 GNDQVRFDLIFSVLAPEIEIITPIRDLQLSREQEIAYLNAQGISYSWEKAKYSINKGLWG 181

Query: 183 LAQDIGGQDLVNLILEES 200
            +            L E+
Sbjct: 182 TSVGGVETLGSKEPLPET 199


>gi|145354797|ref|XP_001421662.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581900|gb|ABO99955.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 402

 Score = 46.8 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 51/155 (32%), Gaps = 10/155 (6%)

Query: 10  SALLL-FSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELM-PK 66
           SA++L +SGG D+S  L W  D     V T + D GQ  ++E       +  + E+    
Sbjct: 3   SAVVLAYSGGLDTSIILKWLQDTYGCEVVTFTADLGQGEELEPARAKAAQFGVKEIFVDD 62

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            ++    D++ P+     +   +     ++           +  R I         A   
Sbjct: 63  LREEFVRDYVFPMFRANALYEGTYLLGTSIARP-------LIAKRQIEIAKQVGADAVCH 115

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
           G T         +   Y       + A     +L 
Sbjct: 116 GATGKGNDQVRFELGYYGLKPDVKVIAPWREWDLN 150


>gi|315651082|ref|ZP_07904116.1| GMP synthase [Eubacterium saburreum DSM 3986]
 gi|315486672|gb|EFU77020.1| GMP synthase [Eubacterium saburreum DSM 3986]
          Length = 517

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 44/187 (23%), Gaps = 16/187 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS           + +  +  D+G            +RK   + +  
Sbjct: 218 NGKVLCALSGGVDSSVAAVMLSKAVGENLTCVFVDHG-----------LLRKNEGDEVEA 266

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G   +  + +       S    V+   +           R              L
Sbjct: 267 VFGPNGNYKLNFIRVNAAERFYSKLAGVSEP-EKKRKIIGEEFIRVFEEEAKKIGKIDFL 325

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E   SG                         +  PL  L K E  K   +
Sbjct: 326 VQGTIYPDVVE---SGLGGESVVIKSHHNVGGLPDYVDFKEIIEPLRDLFKDEVRKAGLE 382

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 383 LGIPKHL 389


>gi|310779706|ref|YP_003968038.1| GMP synthase (glutamine-hydrolyzing) [Ilyobacter polytropus DSM
           2926]
 gi|309749029|gb|ADO83690.1| GMP synthase (glutamine-hydrolyzing) [Ilyobacter polytropus DSM
           2926]
          Length = 512

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 51/183 (27%), Gaps = 18/183 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +L  SGG DSS           D++     D G   K E                K  
Sbjct: 217 KVILALSGGVDSSVAAVLIHKAIGDQLSCFFVDTGLMRKDE--------------AKKVM 262

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           ++ GE + + +  +                ++                      A  L  
Sbjct: 263 ETYGEHYNINIECIDAEDRFLSKLAGVSDPEEKRKIIGNEFIYIFEDQKKRFKDADFLAQ 322

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I   V E+     P      I++      L  E    +  PL  L K E  ++ +++G
Sbjct: 323 GTIYPDVIESQSVKGPSAT---IKSHHNVGGLPEEMKFELLEPLRELFKDEVRQVGRELG 379

Query: 189 GQD 191
             D
Sbjct: 380 IPD 382


>gi|315607764|ref|ZP_07882757.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella buccae ATCC 33574]
 gi|315250233|gb|EFU30229.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella buccae ATCC 33574]
          Length = 359

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/183 (12%), Positives = 42/183 (22%), Gaps = 7/183 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K     +L SGG DSS  +          +      G   + E +C     + +      
Sbjct: 8   KDKRIAVLLSGGVDSSVVVCELAALGLHPDCFYIKIGPEEQEEWDCSSE--EDLEMATAV 65

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                    ++      +         +             +  R I F  F A + +  
Sbjct: 66  AARYGCRLQVVD--CHREYWDEVTRYTMEKVKAGFTPNPDVMCNRLIKFGAFDAKMGHDY 123

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKL 183
            +             G            +    L       +     P+    K E  ++
Sbjct: 124 DLIATGHYAQTEWIDGRKWLVTSPDPVKDQTDFLAQIYDWQLRKAIFPIGHYMKDEVREI 183

Query: 184 AQD 186
           A  
Sbjct: 184 AGR 186


>gi|237745234|ref|ZP_04575715.1| bifunctional GMP synthase/glutamine amidotransferase [Fusobacterium
           sp. 7_1]
 gi|229432463|gb|EEO42675.1| bifunctional GMP synthase/glutamine amidotransferase [Fusobacterium
           sp. 7_1]
          Length = 512

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 58/187 (31%), Gaps = 18/187 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +        ++  +  D G   K E        K+++E+  K
Sbjct: 215 NKKVILGLSGGVDSSVAAALINKAIGKQLTCIFVDTGLLRKDE-------AKQVMEVYAK 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D   +        L  ++  +  +     I    +                   A  L
Sbjct: 268 NFDMNIKCINAEERFLTKLTGVTDPETKRKIIGKEFVE-------VFNEEAKKIEGAEFL 320

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+     P      I++      L  +    +  PL  L K E  K+ ++
Sbjct: 321 AQGTIYPDVIESVSVKGPSVT---IKSHHNVGGLPKDLKFELLEPLRELFKDEVRKVGRE 377

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 378 LGIPDYM 384


>gi|227535218|ref|ZP_03965267.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus paracasei subsp. paracasei ATCC 25302]
 gi|227187102|gb|EEI67169.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus paracasei subsp. paracasei ATCC 25302]
          Length = 471

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 51/197 (25%), Gaps = 16/197 (8%)

Query: 3   DII-----KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           +++           ++  SGG DSS        +   V  +             C     
Sbjct: 94  EMMVIVLDNSNIRVVVGMSGGVDSSVTALLLKQQGYDVVGVFMKNWDDTDENGVC--TAT 151

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
               ++     +     + +            + +    + +    PN  V     I   
Sbjct: 152 TDYEDVAKVASEIGIPYYSIN---FEKEYWDRVFQYFLDEYKAGRTPNPDVMCNKEIKFK 208

Query: 118 FAATLAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTP 171
                A +L    I +G      +         R       +T     L  +       P
Sbjct: 209 AFLDYADQLNADYIAMGHYAQVKTDENGIVHMLRGADGNKDQTYFLSQLSQDQLKKSLFP 268

Query: 172 LMWLKKYETWKLAQDIG 188
           +  L+K E  K+A+  G
Sbjct: 269 IGHLQKPEVRKIAEAAG 285


>gi|191638296|ref|YP_001987462.1| tRNA-specific 2-thiouridylase MnmA [Lactobacillus casei BL23]
 gi|190712598|emb|CAQ66604.1| Probable tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus casei BL23]
 gi|327382323|gb|AEA53799.1| tRNA-specific 2-thiouridylase mnmA [Lactobacillus casei LC2W]
 gi|327385523|gb|AEA56997.1| tRNA-specific 2-thiouridylase mnmA [Lactobacillus casei BD-II]
          Length = 443

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 51/197 (25%), Gaps = 16/197 (8%)

Query: 3   DII-----KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           +++           ++  SGG DSS        +   V  +             C     
Sbjct: 66  EMMVIVLDNSNIRVVVGMSGGVDSSVTALLLKQQGYDVVGVFMKNWDDTDENGVC--TAT 123

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
               ++     +     + +            + +    + +    PN  V     I   
Sbjct: 124 TDYEDVAKVASEIGIPYYSIN---FEKEYWDRVFQYFLDEYKAGRTPNPDVMCNKEIKFK 180

Query: 118 FAATLAYRLGITNIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTP 171
                A +L    I +G      +         R       +T     L  +       P
Sbjct: 181 AFLDYADQLNADYIAMGHYAQVKTDENGIVHMLRGADGNKDQTYFLSQLSQDQLKKSLFP 240

Query: 172 LMWLKKYETWKLAQDIG 188
           +  L+K E  K+A+  G
Sbjct: 241 IGHLQKPEVRKIAEAAG 257


>gi|160934354|ref|ZP_02081741.1| hypothetical protein CLOLEP_03225 [Clostridium leptum DSM 753]
 gi|156867027|gb|EDO60399.1| hypothetical protein CLOLEP_03225 [Clostridium leptum DSM 753]
          Length = 515

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 52/187 (27%), Gaps = 21/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS            ++  +  D+G   K E +    V +K  ++    
Sbjct: 220 KKVLCALSGGVDSSVAALLVHKAVGKQLTCIFVDHGLLRKDEGDQVETVFRKQFDMNLIR 279

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            ++           L  ++  S  +     I +          R              L 
Sbjct: 280 VNAKDR-------FLSKLAGVSEPEKKRKIIGEEF-------IRVFEEESQKLGKIEFLC 325

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-VHTPLMWLKKYETWKLAQD 186
              I   V E+            I++      L  +     +  PL  L K E  +   +
Sbjct: 326 QGTIYPDVVESGVGEA-----AVIKSHHNVGGLPEDVGFEGIIEPLRDLFKDEVRQAGLE 380

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 381 LGIPGPL 387


>gi|157961142|ref|YP_001501176.1| GMP synthase [Shewanella pealeana ATCC 700345]
 gi|226739731|sp|A8H254|GUAA_SHEPA RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|157846142|gb|ABV86641.1| GMP synthase, large subunit [Shewanella pealeana ATCC 700345]
          Length = 525

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 54/181 (29%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS           D++  +  D G    + L     V     +       
Sbjct: 230 VILGLSGGVDSSVVAMLLHRAIGDKLTCVFVDNG---LLRLNEAQQVMDMFGDHFGLNIV 286

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +  ++    A+ G+    +  K +     +                      A  L   
Sbjct: 287 HVDAENRFLDAMAGEAEPEAKRKIIGRVFVEIFDEE-----------SKKCVNAKWLAQG 335

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S         I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 336 TIYPDVIESAGSATGKAH--CIKSHHNVGGLPDDMAMGLVEPLRELFKDEVRKIGLELGL 393

Query: 190 Q 190
            
Sbjct: 394 P 394


>gi|319795000|ref|YP_004156640.1| argininosuccinate synthase [Variovorax paradoxus EPS]
 gi|315597463|gb|ADU38529.1| argininosuccinate synthase [Variovorax paradoxus EPS]
          Length = 447

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 3/72 (4%)

Query: 1  MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M+ I++  P      + FSGG D+S  L W  ++       + + GQ ++ + +      
Sbjct: 1  MSTILQNVPAGQKVGIAFSGGLDTSAALHWMRNKGAIPYAYTANLGQPDEPDYDEIPRKA 60

Query: 58 KKIVELMPKWKD 69
                  +  D
Sbjct: 61 MLYGAENARLID 72


>gi|292670966|ref|ZP_06604392.1| GMP synthase [Selenomonas noxia ATCC 43541]
 gi|292647587|gb|EFF65559.1| GMP synthase [Selenomonas noxia ATCC 43541]
          Length = 518

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 54/189 (28%), Gaps = 21/189 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +  AL   SGG DSS            ++  +  D+G            +RK   + +  
Sbjct: 220 SGRALCALSGGVDSSVAAVLLSKAIGSQLTCVFVDHG-----------LLRKNEGDEVEA 268

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              S G   +  + I          + +    Q               F+      A  +
Sbjct: 269 VFGSSGVYDVNFIRINAQDRFYEKLRGITEPEQK-------RKIIGEEFIRVFEEAAREI 321

Query: 127 GI-TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLA 184
           G    +V G    D       +   I++      L        +  PL  L K E     
Sbjct: 322 GAVDFLVQGTIYPDVIESGLGKSAVIKSHHNVGGLPDHVDFKEIVEPLRLLFKDEVRAAG 381

Query: 185 QDIGGQDLV 193
           +++G  D +
Sbjct: 382 RELGIPDHL 390


>gi|239631620|ref|ZP_04674651.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methylt ransferase
           [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|239526085|gb|EEQ65086.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methylt ransferase
           [Lactobacillus paracasei subsp. paracasei 8700:2]
          Length = 376

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 48/185 (25%), Gaps = 11/185 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS        +   V  +             C         ++     +
Sbjct: 11  RVVVGMSGGVDSSVTALLLKQQGYDVVGVFMKNWDDTDENGVC--TATTDYEDVAKVASE 68

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                + +            + +    + +    PN  V     I        A +L   
Sbjct: 69  IGIPYYSIN---FEKEYWDRVFQYFLDEYKAGRTPNPDVMCNKEIKFKAFLDYADQLNAD 125

Query: 130 NIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYETWKL 183
            I +G      +         R       +T     L  +       P+  L+K E  K+
Sbjct: 126 YIAMGHYAQVKTDENGIVHMLRGADGNKDQTYFLSQLSQDQLKKSLFPIGHLQKPEVRKI 185

Query: 184 AQDIG 188
           A+  G
Sbjct: 186 AEAAG 190


>gi|228993360|ref|ZP_04153276.1| Argininosuccinate synthase [Bacillus pseudomycoides DSM 12442]
 gi|228766428|gb|EEM15071.1| Argininosuccinate synthase [Bacillus pseudomycoides DSM 12442]
          Length = 403

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 5  IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +K     ++L +SGG D+S  + W  ++   +  L  D G
Sbjct: 1  MKMEKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 40


>gi|228999413|ref|ZP_04158992.1| Argininosuccinate synthase [Bacillus mycoides Rock3-17]
 gi|229006968|ref|ZP_04164597.1| Argininosuccinate synthase [Bacillus mycoides Rock1-4]
 gi|228754286|gb|EEM03702.1| Argininosuccinate synthase [Bacillus mycoides Rock1-4]
 gi|228760358|gb|EEM09325.1| Argininosuccinate synthase [Bacillus mycoides Rock3-17]
          Length = 403

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 5  IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +K     ++L +SGG D+S  + W  ++   +  L  D G
Sbjct: 1  MKMEKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 40


>gi|195162397|ref|XP_002022042.1| GL14198 [Drosophila persimilis]
 gi|194103940|gb|EDW25983.1| GL14198 [Drosophila persimilis]
          Length = 387

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 62/213 (29%), Gaps = 12/213 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--------RLCVRK 58
              + ++  SGG DS+       +R  RV  +       +     C             +
Sbjct: 1   MIRNIVVGMSGGVDSAVSAHLLKERGHRVMGVFMRNWDEHDEAGRCSGEQDLKDAEWACQ 60

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-TFVPGRNIIFLV 117
           ++   + +    + E      +   D     LT N  +    +   +       + +   
Sbjct: 61  RLGIELRQVN-YVKEYWTAVFSAFLDDYQQGLTPNPDILCNRHIKFDLFHRHALDKLGYD 119

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM-WLK 176
             AT  Y        +               DT +     +       +      +  L 
Sbjct: 120 AVATGHYARNSLGNFLEHRADGGEARLLIPADTFKDQTFFLAGIPRQALQRTMFPLGDLA 179

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRD 209
           K E   LA+ IG Q  +    E +  C++GKRD
Sbjct: 180 KNEVKLLARRIGLQ-RLAHKRESTGICFVGKRD 211


>gi|190892296|ref|YP_001978838.1| argininosuccinate synthase [Rhizobium etli CIAT 652]
 gi|190697575|gb|ACE91660.1| argininosuccinate synthase protein [Rhizobium etli CIAT 652]
          Length = 404

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 34/86 (39%), Gaps = 2/86 (2%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + +K    +L +SGG D+S  L W  +     V T + D GQ  ++E          I +
Sbjct: 1  MARKIGKIVLAYSGGLDTSIILKWLQETYGCEVVTFTADLGQGEELEPARAKAAMLGIKD 60

Query: 63 LM-PKWKDSLGEDHILPLAILGDISH 87
          +     ++    + + P+     +  
Sbjct: 61 IRIADLREEFVGEFVFPMLRANALYE 86


>gi|241207252|ref|YP_002978348.1| GMP synthase [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240861142|gb|ACS58809.1| GMP synthase, large subunit [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 520

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 53/184 (28%), Gaps = 17/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS       +   D++  +  D+G      L  +      +      +
Sbjct: 223 KRVICALSGGVDSSVAALLIHEAVGDQLTCILVDHG------LMRKDEAAGVVAMFREHY 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              L          +G++   S         +        +              A  LG
Sbjct: 277 NLHLLHVDAAD-RFIGELEGVSDP-------ETKRKIIGRLFIETFEEEAKKLGGADFLG 328

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   V E+    +      TI++      L     + +  PL  L K E   L +++
Sbjct: 329 QGTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMKMQLVEPLRELFKDEVRALGREL 386

Query: 188 GGQD 191
           G  D
Sbjct: 387 GLPD 390


>gi|61657937|ref|NP_001013413.1| argininosuccinate synthase [Gallus gallus]
 gi|82197765|sp|Q5ZJ23|ASSY_CHICK RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|53133882|emb|CAG32270.1| hypothetical protein RCJMB04_21j5 [Gallus gallus]
          Length = 416

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 2/59 (3%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + +   + +L +SGG D+S  L W  ++   V     + GQ    + +        +  
Sbjct: 1  MAEPRDTVVLAYSGGLDTSCILVWLKEQGYTVIAFLANIGQ--TEDFDAAQKKALALGA 57


>gi|116494783|ref|YP_806517.1| tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase,
           PP-loop ATPase [Lactobacillus casei ATCC 334]
 gi|301066347|ref|YP_003788370.1| putative tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase [Lactobacillus casei str. Zhang]
 gi|122263799|sp|Q039P7|MNMA_LACC3 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|116104933|gb|ABJ70075.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus casei ATCC 334]
 gi|300438754|gb|ADK18520.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase, PP-loop ATPase [Lactobacillus casei
           str. Zhang]
          Length = 377

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 48/185 (25%), Gaps = 11/185 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS        +   V  +             C         ++     +
Sbjct: 12  RVVVGMSGGVDSSVTALLLKQQGYDVVGVFMKNWDDTDENGVC--TATTDYEDVAKVASE 69

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                + +            + +    + +    PN  V     I        A +L   
Sbjct: 70  IGIPYYSIN---FEKEYWDRVFQYFLDEYKAGRTPNPDVMCNKEIKFKAFLDYADQLNAD 126

Query: 130 NIVIGVCETDYS----GYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYETWKL 183
            I +G      +         R       +T     L  +       P+  L+K E  K+
Sbjct: 127 YIAMGHYAQVKTDENGIVHMLRGADGNKDQTYFLSQLSQDQLKKSLFPIGHLQKPEVRKI 186

Query: 184 AQDIG 188
           A+  G
Sbjct: 187 AEAAG 191


>gi|311277856|ref|YP_003940087.1| argininosuccinate synthase [Enterobacter cloacae SCF1]
 gi|308747051|gb|ADO46803.1| argininosuccinate synthase [Enterobacter cloacae SCF1]
          Length = 448

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRKKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 72


>gi|311739982|ref|ZP_07713816.1| GMP synthase [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311305055|gb|EFQ81124.1| GMP synthase [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 524

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 53/185 (28%), Gaps = 12/185 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+   +       DR+  +  D+G     E E          ++   + 
Sbjct: 222 RAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGERE----------QVEKDFV 271

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            S G   +        +   +   +   K +           R  +  V     A     
Sbjct: 272 ASTGAKLVTADERAAFLEKLAGVSDPEAKRKAIGAEFIRSFERA-VAGVLDDAPAGSTVD 330

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +    +  PL  L K E   + +++G
Sbjct: 331 YLVQGTLYPDVVESGGGDGTANIKSHHNVGGLPDDVEFELVEPLRLLFKDEVRAVGRELG 390

Query: 189 GQDLV 193
             + +
Sbjct: 391 LPEEI 395


>gi|154496648|ref|ZP_02035344.1| hypothetical protein BACCAP_00940 [Bacteroides capillosus ATCC
           29799]
 gi|150273900|gb|EDN01000.1| hypothetical protein BACCAP_00940 [Bacteroides capillosus ATCC
           29799]
          Length = 513

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 61/189 (32%), Gaps = 24/189 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   LL  SGG DSS   +   +   +++  +  D+G   K E +       ++ +   +
Sbjct: 218 SGKVLLALSGGVDSSVVAALLAEAVGNQLTCVFVDHGLMRKDEGD-------EVEQAFAR 270

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           W  +          +L     S   +   +  ++              F+      A ++
Sbjct: 271 WDINFVRVDAESRFLLKLAGVSEPERKRKIIGEE--------------FIRVFEEEAKKI 316

Query: 127 GI-TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLA 184
           G    +  G    D           I++      L        +  PL  L K E  +L 
Sbjct: 317 GAVDFLAQGTIYPDVIESGAGDAAVIKSHHNVGGLPDYVDFKEIIEPLRLLFKDEVRQLG 376

Query: 185 QDIGGQDLV 193
           +++G  + +
Sbjct: 377 RELGLPEYL 385


>gi|116747512|ref|YP_844199.1| argininosuccinate synthase [Syntrophobacter fumaroxidans MPOB]
 gi|166221026|sp|A0LEB2|ASSY_SYNFM RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|116696576|gb|ABK15764.1| argininosuccinate synthase [Syntrophobacter fumaroxidans MPOB]
          Length = 401

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 29/72 (40%), Gaps = 2/72 (2%)

Query: 9  PSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVR-KKIVELMPK 66
             +L +SGG D+S  L W ++     V   S D GQ  +++      +    +   +  
Sbjct: 4  KKVVLAYSGGLDTSIILKWLIESYGCEVVAFSADLGQAEELDGLEAKALATGAVKARIVD 63

Query: 67 WKDSLGEDHILP 78
           ++    D + P
Sbjct: 64 LREEFVRDFVFP 75


>gi|325970674|ref|YP_004246865.1| GMP synthase (glutamine-hydrolyzing) [Spirochaeta sp. Buddy]
 gi|324025912|gb|ADY12671.1| GMP synthase (glutamine-hydrolyzing) [Spirochaeta sp. Buddy]
          Length = 517

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 54/186 (29%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DS+           D++  +  + G   K E      V K   +     
Sbjct: 220 KQVLCGLSGGVDSAVAAVLIHKAIGDQLVCVFVNNGLLRKGE---AEMVLKLFRDNYKIR 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                 +     A L  ++  S  +     I    +   +   R    + F A       
Sbjct: 277 LQYANAE----EAFLSALAGVSEPEAKRKIIGKVFIDTFYSEARKAGEISFLA------- 325

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                +     +          TI++      L  +    +  PL  L K E   L +++
Sbjct: 326 --QGTLYPDVIESKSPSGGPSATIKSHHNVGGLPEDLKWDLLEPLRELFKDEVRALGREL 383

Query: 188 GGQDLV 193
           G  +++
Sbjct: 384 GLPEVL 389


>gi|317058631|ref|ZP_07923116.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Fusobacterium sp. 3_1_5R]
 gi|313684307|gb|EFS21142.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Fusobacterium sp. 3_1_5R]
          Length = 332

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 27/78 (34%), Gaps = 9/78 (11%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL----SFDYGQRNKVELECRLCVRKKIVELMP 65
           AL LFSGG DS+  +    ++   V  L     F  G       E    + K++   + 
Sbjct: 5  KALALFSGGLDSALAIKVVQEQGIEVIALNFVSHFFGG-----VNEKAEYMAKQLGIQLE 59

Query: 66 KWKDSLGEDHILPLAILG 83
                    ++   + G
Sbjct: 60 YIHFEKRHMEVVKDPVYG 77


>gi|298290963|ref|YP_003692902.1| GMP synthase, large subunit [Starkeya novella DSM 506]
 gi|296927474|gb|ADH88283.1| GMP synthase, large subunit [Starkeya novella DSM 506]
          Length = 533

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 57/185 (30%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS       +   D++  +  D+G     E        +K+V L   
Sbjct: 235 NEKVICGLSGGVDSSVAAVLIHEAIGDQLTCVFVDHGLLRLGE-------AEKVVTLFRD 287

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +            LG +       +  +K +        V       +  AA LA   
Sbjct: 288 AYNIPLVHVDAEELFLGALEG---VTDPEVKRKTIGKLFIDVFEAEAKKIGGAAFLAQGT 344

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                 +     +   +      TI++      L    ++ +  PL  L K E   L ++
Sbjct: 345 ------LYPDVIESVSFTGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRALGRE 398

Query: 187 IGGQD 191
           +G  +
Sbjct: 399 LGLPE 403


>gi|261749408|ref|YP_003257093.1| argininosuccinate synthase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497500|gb|ACX83950.1| argininosuccinate synthase(argG)/acetyltransferase activity of
           N-acetylglutamate synthase (argA) [Blattabacterium sp.
           (Periplaneta americana) str. BPLAN]
          Length = 588

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 30/67 (44%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              +L +SGG D+S CL + L     + T+  + G   + EL+        I  +  +  
Sbjct: 194 DKIVLAYSGGLDTSYCLKYLLQEGYEIHTVIINTGGFKEEELKKIQERALNIGAISHRTI 253

Query: 69  DSLGEDH 75
           D++ E +
Sbjct: 254 DAIEEYY 260


>gi|257466119|ref|ZP_05630430.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
          [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917276|ref|ZP_07913516.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691151|gb|EFS27986.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Fusobacterium gonidiaformans ATCC 25563]
          Length = 332

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 27/78 (34%), Gaps = 9/78 (11%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL----SFDYGQRNKVELECRLCVRKKIVELMP 65
           AL LFSGG DS+  +    ++   V  L     F  G       E    + K++   + 
Sbjct: 5  KALALFSGGLDSALAIKVVQEQGIEVIALNFVSHFFGG-----VNEKAEYMAKQLGIQLE 59

Query: 66 KWKDSLGEDHILPLAILG 83
                    ++   + G
Sbjct: 60 YIHFEKRHMEVVKDPVYG 77


>gi|255323971|ref|ZP_05365097.1| GMP synthase [Corynebacterium tuberculostearicum SK141]
 gi|255299151|gb|EET78442.1| GMP synthase [Corynebacterium tuberculostearicum SK141]
          Length = 524

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 53/185 (28%), Gaps = 12/185 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+   +       DR+  +  D+G     E E          ++   + 
Sbjct: 222 RAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGERE----------QVEKDFV 271

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            S G   +        +   +   +   K +           R  +  V     A     
Sbjct: 272 ASTGAKLVTADERAAFLEKLAGVSDPEAKRKAIGAEFIRSFERA-VAGVLDDAPAGSTVD 330

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +    +  PL  L K E   + +++G
Sbjct: 331 YLVQGTLYPDVVESGGGDGTANIKSHHNVGGLPDDVEFKLVEPLRLLFKDEVRAVGRELG 390

Query: 189 GQDLV 193
             + +
Sbjct: 391 LPEEI 395


>gi|284035340|ref|YP_003385270.1| Argininosuccinate synthase [Spirosoma linguale DSM 74]
 gi|283814633|gb|ADB36471.1| Argininosuccinate synthase [Spirosoma linguale DSM 74]
          Length = 400

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 49/178 (27%), Gaps = 12/178 (6%)

Query: 7   KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
            +   +L FSGG D S      + DR   V ++  D G  +  EL+        +     
Sbjct: 1   MSQKVVLAFSGGLDTSFCVKYLSEDRGMDVYSVLVDTGGFSDAELKAIEERAYSLGVKSH 60

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  + +   L  L           V   +  NN     V    I   + AA  A  
Sbjct: 61  VTISKTDDYYQQCLKFL-----------VFGNVLKNNTYPLSVSAERIFQAIAAAEYARE 109

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           +G + I  G                I A E  I   +          +   K +    
Sbjct: 110 IGASAIAHGSTGAGNDQVRFDMAFRIIAPEAEIITPIRDLRLSREAEIEYLKAKGVDQ 167


>gi|303251982|ref|ZP_07338153.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|307247144|ref|ZP_07529196.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Actinobacillus pleuropneumoniae serovar 2 str. S1536]
 gi|302649412|gb|EFL79597.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|306856393|gb|EFM88544.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Actinobacillus pleuropneumoniae serovar 2 str. S1536]
          Length = 389

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 52/188 (27%), Gaps = 9/188 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 27  NAKKKVIIGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 83

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     +             +  + I F  F    A  
Sbjct: 84  AVADKLG-MKLHKINFAAEYWDNVFEHFLNEYKAGRTPNPDILCNKEIKFKAFLEYAAED 142

Query: 126 LGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           LG   I  G          + +                 L  +       P+  ++K   
Sbjct: 143 LGADYIATGHYVRRSGDDNNVQLLRGLDANKDQSYFLYTLSHKQVGQSLFPVGDIEKPIV 202

Query: 181 WKLAQDIG 188
            ++A+D+G
Sbjct: 203 RQIAEDLG 210


>gi|261415273|ref|YP_003248956.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fibrobacter succinogenes subsp. succinogenes S85]
 gi|261371729|gb|ACX74474.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fibrobacter succinogenes subsp. succinogenes S85]
 gi|302327007|gb|ADL26208.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Fibrobacter succinogenes subsp. succinogenes S85]
          Length = 355

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 51/188 (27%), Gaps = 9/188 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK--IVE 62
           + K   A+ + SGG DSS        +   V  ++     R   +++    V     +V 
Sbjct: 1   MSKTRVAVGM-SGGVDSSVAALLLQQQGYEVVGVTL----RVLPDVDSAFDVENDPSVVR 55

Query: 63  LMPKWKDSLGEDHILPLAIL--GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                +    E H+   +    G++           +  +             +     +
Sbjct: 56  AKMIAEKLGIEHHVANCSDAFTGEVLKRCHADFSHARTPNPCCYCNRFIKFGWMMDYAKS 115

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
             A  L   + V              R            +  E    V TPL    K E 
Sbjct: 116 LGAEFLATGHYVRIEEVNGVRRLLRGRDPGKDQSYFLFWVPDERRNHVLTPLGTYVKSEV 175

Query: 181 WKLAQDIG 188
            ++A   G
Sbjct: 176 REIAAQNG 183


>gi|190149429|ref|YP_001967954.1| tRNA (5-methylaminomethyl-2- thiouridylate)-methyltransferase
           [Actinobacillus pleuropneumoniae serovar 7 str. AP76]
 gi|303249862|ref|ZP_07336066.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|307249368|ref|ZP_07531361.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Actinobacillus pleuropneumoniae serovar 4 str. M62]
 gi|307251687|ref|ZP_07533592.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|307260616|ref|ZP_07542308.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Actinobacillus pleuropneumoniae serovar 12 str. 1096]
 gi|307262747|ref|ZP_07544374.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Actinobacillus pleuropneumoniae serovar 13 str. N273]
 gi|189914560|gb|ACE60812.1| putative tRNA (5-methylaminomethyl-2-
           thiouridylate)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|302651429|gb|EFL81581.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|306858590|gb|EFM90653.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Actinobacillus pleuropneumoniae serovar 4 str. M62]
 gi|306860884|gb|EFM92892.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|306869693|gb|EFN01478.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Actinobacillus pleuropneumoniae serovar 12 str. 1096]
 gi|306871892|gb|EFN03609.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Actinobacillus pleuropneumoniae serovar 13 str. N273]
          Length = 389

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 52/188 (27%), Gaps = 9/188 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 27  NAKKKVIIGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 83

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     +             +  + I F  F    A  
Sbjct: 84  AVADKLG-MKLHKINFAAEYWDNVFEHFLNEYKAGRTPNPDILCNKEIKFKAFLEYAAED 142

Query: 126 LGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           LG   I  G          + +                 L  +       P+  ++K   
Sbjct: 143 LGADYIATGHYVRRSGDDNNAQLLRGLDANKDQSYFLYTLSHKQVGQSLFPVGDIEKPIV 202

Query: 181 WKLAQDIG 188
            ++A+D+G
Sbjct: 203 RQIAEDLG 210


>gi|167759635|ref|ZP_02431762.1| hypothetical protein CLOSCI_01993 [Clostridium scindens ATCC
          35704]
 gi|167662761|gb|EDS06891.1| hypothetical protein CLOSCI_01993 [Clostridium scindens ATCC
          35704]
          Length = 449

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 28/80 (35%), Gaps = 4/80 (5%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
          ++ +    ++  SGG DS   L        +    VE +   +G R K      + V+K 
Sbjct: 14 MLDEKDKVIVGVSGGADSICLLFMLIQLKKEMGLSVEAVHVHHGLREKTADADAVYVKKV 73

Query: 60 IVELMPKWKDSLGEDHILPL 79
            EL    +    +     L
Sbjct: 74 CKELGIGLRLYYEDVKSFAL 93


>gi|165975614|ref|YP_001651207.1| tRNA-specific 2-thiouridylase MnmA [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|205811090|sp|B0BS63|MNMA_ACTPJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|165875715|gb|ABY68763.1| tRNA(5-methylaminomethyl-2-thiouridylate)methyltransferase
           [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
          Length = 389

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 52/188 (27%), Gaps = 9/188 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 27  NAKKKVIIGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 83

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     +             +  + I F  F    A  
Sbjct: 84  AVADKLG-MKLHKINFAAEYWDNVFEHFLNEYKAGRTPNPDILCNKEIKFKAFLEYAAED 142

Query: 126 LGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           LG   I  G          + +                 L  +       P+  ++K   
Sbjct: 143 LGADYIATGHYVRRSGDDNNAQLLRGLDANKDQSYFLYTLSHKQVGQSLFPVGDIEKPIV 202

Query: 181 WKLAQDIG 188
            ++A+D+G
Sbjct: 203 RQIAEDLG 210


>gi|146296983|ref|YP_001180754.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Caldicellulosiruptor saccharolyticus DSM 8903]
 gi|259647688|sp|A4XKX8|GUAA_CALS8 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|145410559|gb|ABP67563.1| GMP synthase (glutamine-hydrolyzing) [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 511

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 53/189 (28%), Gaps = 23/189 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS             +  +  D+G   K E      V K        
Sbjct: 215 NQKVVCALSGGVDSSVAAVLVHKAIGKNLFCIFVDHGLLRKGE---AEEVIKTFKGQFDM 271

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +        A+ G I      K +  +                  +      A +L
Sbjct: 272 NVIKVDAKERFLKALCGVIDPERKRKIIGEEF-----------------IRVFEEEASKL 314

Query: 127 G-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLA 184
           G +  +V G    D       +  TI++      L        +  PL  L K E  ++ 
Sbjct: 315 GDVKFLVQGTIYPDVVESGVGKAATIKSHHNVGGLPEHIKFERIIEPLRELFKDEVRRVG 374

Query: 185 QDIGGQDLV 193
            ++G  + +
Sbjct: 375 VELGIPEKI 383


>gi|126207646|ref|YP_001052871.1| tRNA-specific 2-thiouridylase MnmA [Actinobacillus pleuropneumoniae
           L20]
 gi|205811077|sp|A3MYN0|MNMA_ACTP2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|126096438|gb|ABN73266.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Actinobacillus pleuropneumoniae serovar 5b str. L20]
          Length = 389

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 52/188 (27%), Gaps = 9/188 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 27  NAKKKVIIGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 83

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     +             +  + I F  F    A  
Sbjct: 84  AVADKLG-MKLHKINFAAEYWDNVFEHFLNEYKAGRTPNPDILCNKEIKFKAFLEYAAED 142

Query: 126 LGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           LG   I  G          + +                 L  +       P+  ++K   
Sbjct: 143 LGADYIATGHYVRRSGDDNNAQLLRGLDANKDQSYFLYTLSHKQVGQSLFPVGDIEKPIV 202

Query: 181 WKLAQDIG 188
            ++A+D+G
Sbjct: 203 RQIAEDLG 210


>gi|53728867|ref|ZP_00134691.2| COG0482: Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase, contains the PP-loop ATPase domain
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
          Length = 389

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 52/188 (27%), Gaps = 9/188 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 27  NAKKKVIIGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 83

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     +             +  + I F  F    A  
Sbjct: 84  AVADKLG-MKLHKINFAAEYWDNVFEHFLNEYKAGRTPNPDILCNKEIKFKAFLEYAAED 142

Query: 126 LGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           LG   I  G          + +                 L  +       P+  ++K   
Sbjct: 143 LGADYIATGHYVRRSGDDNNAQLLRGLDANKDQSYFLYTLSHKQVGQSLFPVGDIEKPIV 202

Query: 181 WKLAQDIG 188
            ++A+D+G
Sbjct: 203 RQIAEDLG 210


>gi|307256183|ref|ZP_07537970.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Actinobacillus pleuropneumoniae serovar 10 str. D13039]
 gi|306865364|gb|EFM97260.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Actinobacillus pleuropneumoniae serovar 10 str. D13039]
          Length = 389

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 52/188 (27%), Gaps = 9/188 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 27  NAKKKVIIGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 83

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     +             +  + I F  F    A  
Sbjct: 84  AVADKLG-MKLHKINFAAEYWDNVFEHFLNEYKAGRTPNPDILCNKEIKFKAFLEYAAED 142

Query: 126 LGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           LG   I  G          + +                 L  +       P+  ++K   
Sbjct: 143 LGADYIATGHYVRRSGDDNNVQLLRGLDANKDQSYFLYTLSHKQVGQSLFPVGDIEKPIV 202

Query: 181 WKLAQDIG 188
            ++A+D+G
Sbjct: 203 RQIAEDLG 210


>gi|295101943|emb|CBK99488.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain or B
           subunit/GMP synthase (glutamine-hydrolyzing), N-terminal
           domain or A subunit [Faecalibacterium prausnitzii L2-6]
          Length = 516

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 45/187 (24%), Gaps = 14/187 (7%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   L   SGG DSS   +        ++  +  D+G   K E E          E+   
Sbjct: 215 SGKVLCALSGGVDSSVLAAMLAKAIGKQLTCVFVDHGLLRKNEKE----------EVCSV 264

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +         +    +              + +           R              L
Sbjct: 265 FGPGNANGFDINFICVDARDRYFAKLAGVTEPERKRKIIGEEFIRVFEEQAKQIGKVDFL 324

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E   SG                         +  PL  L K E  +  ++
Sbjct: 325 AQGTIYPDVVE---SGLGGESTVIKSHHNVGGLPDTVDFKELVEPLRNLFKDEVRQAGRE 381

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 382 LGLPEYL 388


>gi|254523199|ref|ZP_05135254.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Stenotrophomonas sp. SKA14]
 gi|219720790|gb|EED39315.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Stenotrophomonas sp. SKA14]
          Length = 380

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 49/188 (26%), Gaps = 11/188 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            P  ++  SGG DSS      + + + V  L       +          R+  V +    
Sbjct: 3   TPRVMVGVSGGVDSSVAAWRLVQQGEAVAGLFMQNWADDGSGDCRAEDDRRDAVAVCGLL 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                                 + ++   +      PN  V     +        A  LG
Sbjct: 63  GIP------FHFRDFSSEYWQGVFEHFLAEYAAGRTPNPDVLCNREVKFKHFLDAARELG 116

Query: 128 ITNIVIGVCETDYSGYPD-----CRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G                    +         LG +       P+  L+K +  +
Sbjct: 117 AERIATGHYARVTQRGGQWLLLRGADRSKDQSYFLHQLGQQQLAATLFPIGDLEKSDLRR 176

Query: 183 LAQDIGGQ 190
           +A+D+G  
Sbjct: 177 IARDVGLP 184


>gi|329955642|ref|ZP_08296550.1| tRNA(Ile)-lysidine synthetase [Bacteroides clarus YIT 12056]
 gi|328526045|gb|EGF53069.1| tRNA(Ile)-lysidine synthetase [Bacteroides clarus YIT 12056]
          Length = 423

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 54/192 (28%), Gaps = 23/192 (11%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
                A   L+  SGG DS   L          E    ++  R +        VR+    
Sbjct: 14  KFFMPADKILVALSGGADSVALLCLLQTLGYECEAAHCNFHLRGEESDRDETFVRQ---- 69

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                       HI+    L     ++  +++++++    L   +              +
Sbjct: 70  ---LCAKRQVPLHIVHFDTLR----TAEERHISIEMAARELRYEWFEKIRTKSNANVIAV 122

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A+    +   + +     +G    R    +            +  +  PL+ L + E   
Sbjct: 123 AHHQDDSVETLLLNLIRGTGINGLRGIRPK------------NGHIVRPLLCLDRNEIIN 170

Query: 183 LAQDIGGQDLVN 194
               IG   + +
Sbjct: 171 YLNRIGQDYVTD 182


>gi|323139064|ref|ZP_08074123.1| GMP synthase, large subunit [Methylocystis sp. ATCC 49242]
 gi|322395724|gb|EFX98266.1| GMP synthase, large subunit [Methylocystis sp. ATCC 49242]
          Length = 534

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 56/183 (30%), Gaps = 12/183 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DS+       +   DR+  +  D+G     E        +++V L     
Sbjct: 233 RVLCGLSGGVDSAVAAVLIHEAIGDRLTCVFVDHGLLRLGE-------AEEVVSLFRD-- 283

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 H +  A L   +     ++  +K +                +      A +   
Sbjct: 284 HYNIPLHHVEAADLFLGALE-GVEDPEVKRKTIGRLFIETFEAEAKKIAQDGRGAPQFLA 342

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
              +        S +      TI++      L    ++ +  PL  L K E   L +++G
Sbjct: 343 QGTLYPDVIESVS-FTGGPSVTIKSHHNVGGLPERMNMALVEPLRELFKDEVRALGRELG 401

Query: 189 GQD 191
             +
Sbjct: 402 LPE 404


>gi|257438245|ref|ZP_05614000.1| GMP synthase [Faecalibacterium prausnitzii A2-165]
 gi|257199322|gb|EEU97606.1| GMP synthase [Faecalibacterium prausnitzii A2-165]
          Length = 516

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 46/185 (24%), Gaps = 14/185 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS   +        ++  +  D+G   K E E    V            
Sbjct: 217 KVLCALSGGVDSSVLAAMLAKAIGKQLTCVFVDHGLLRKNEKEEVCSVFGPGNANGFDIN 276

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               +      + L  ++     + +  +               + FL         +  
Sbjct: 277 FICVDARDRYFSKLAGVTEPERKRKIIGEEFIRVFEEQAKLIGKVDFLAQGTIYPDVVE- 335

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                       SG                         +  PL  L K E  ++ +++G
Sbjct: 336 ------------SGLGGESTVIKSHHNVGGLPDTVDFKELVEPLRNLFKDEVRQVGRELG 383

Query: 189 GQDLV 193
             + +
Sbjct: 384 LPEYL 388


>gi|294934126|ref|XP_002780992.1| hypothetical protein Pmar_PMAR018043 [Perkinsus marinus ATCC 50983]
 gi|239891163|gb|EER12787.1| hypothetical protein Pmar_PMAR018043 [Perkinsus marinus ATCC 50983]
          Length = 733

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 53/193 (27%), Gaps = 7/193 (3%)

Query: 9   PSALLL-FSGGQDSSTCLSWALD----RFDRVETLSFDYGQR--NKVELECRLCVRKKIV 61
           P  L+L  SGG DS T L            ++      +  R     EL+    V  ++ 
Sbjct: 254 PKVLVLSLSGGVDSMTHLYLLSKLQQPLGFKLVACHIRHSNRDDAIQELQWVTYVTARLG 313

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
             +      L   H      +  + +   T+++   +        +              
Sbjct: 314 VPLYHHHVKLRRPHGSLKTGISRMDYEKQTRDIRFSMYAKAHKLAWAAAGLPEEERTQPV 373

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           +     + ++          G     +  +   E   +  +     V   L+  +K E  
Sbjct: 374 VVVGHHMDDVDENRLAELGKGNLLNINGMVINAEGDGDDEIGGVCQVRPLLLSTRKEELI 433

Query: 182 KLAQDIGGQDLVN 194
             A       +V+
Sbjct: 434 ACAARHNIPYMVD 446


>gi|237752293|ref|ZP_04582773.1| GMP synthase [Helicobacter winghamensis ATCC BAA-430]
 gi|229375782|gb|EEO25873.1| GMP synthase [Helicobacter winghamensis ATCC BAA-430]
          Length = 852

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 46/185 (24%), Gaps = 15/185 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS   +       + +  +  D G   K E E    + ++         
Sbjct: 554 KVLCAVSGGVDSSVVATLLYRAIGENLIPVFVDTGLLRKGEREAVEAMFRE--------- 604

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +      +     L       +T     +                             G 
Sbjct: 605 NLKVPLIVADARELFLGRLKGVTDPEKKRKIIGETFIEVFEAEAKKHNTKGEIKFLAQG- 663

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   S        TI++      L       +  PL  L K E   L +++G
Sbjct: 664 ----TLYPDVIESVSVKGPSKTIKSHHNVGGLPEWMKFELIEPLRELFKDEVRALGRELG 719

Query: 189 GQDLV 193
             + +
Sbjct: 720 MPESM 724


>gi|228472050|ref|ZP_04056818.1| GMP synthase [Capnocytophaga gingivalis ATCC 33624]
 gi|228276662|gb|EEK15375.1| GMP synthase [Capnocytophaga gingivalis ATCC 33624]
          Length = 508

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 49/189 (25%), Gaps = 23/189 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DS+           D++  +  + G            + +K  E    
Sbjct: 212 KEKVVLGLSGGVDSTVAAVLLNRAIGDQLHCIFVNNG------------LLRK-GEFQSV 258

Query: 67  WKDSLGEDHILPLAILGDISHS--SLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                G    +          S  +   +   K +        V  +    +     LA 
Sbjct: 259 LAQYQGMGLNIKGVDASGEFLSALAGITDPEAKRKTIGRVFIEVFDKEAHQITDVTYLAQ 318

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                       +   S        TI++      L     + +  PL  L K E  ++ 
Sbjct: 319 G-------TIYPDVIESVSVKGPSATIKSHHNVGGLPDYMKLKIVEPLRTLFKDEVRRVG 371

Query: 185 QDIGGQDLV 193
             +G    +
Sbjct: 372 ASLGIPAEL 380


>gi|218295197|ref|ZP_03496033.1| GMP synthase, large subunit [Thermus aquaticus Y51MC23]
 gi|218244400|gb|EED10925.1| GMP synthase, large subunit [Thermus aquaticus Y51MC23]
          Length = 503

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 53/188 (28%), Gaps = 19/188 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +   LL  SGG DSST              +  D+G     E E      + +   +   
Sbjct: 209 SERVLLAVSGGVDSSTLALLLARAGVDHLAVFVDHGLLRLGEREEVEGALRALGVNLLVV 268

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +    +DH L                 A+K  ++      V GR  + +           
Sbjct: 269 EA---KDHFLK----------------ALKGVEDPEAKRQVIGRAFVEVFSQVARERGPF 309

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                  +               I++      L  +    +  P   L K E  +LA  +
Sbjct: 310 HFLAQGTLYPDVIESAGGHGAAKIKSHHNVGGLPEDLAFELLEPFRLLFKDEVRELALLL 369

Query: 188 GGQDLVNL 195
           G  D + L
Sbjct: 370 GLPDTIRL 377


>gi|167561630|ref|ZP_02354546.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           oklahomensis EO147]
          Length = 510

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 43/175 (24%), Gaps = 7/175 (4%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           ++FSGG DS+  L  A      V  +SF  G     ++E       +   +         
Sbjct: 233 VMFSGGIDSAIVLQLAHRYHPDVTAISF--GLPGSNDIEIAHRYCAE-NGIRHVIYTFTK 289

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           +D +  +             +       +            + L    +     G  ++ 
Sbjct: 290 QDLLDNIDDAVYYGEFFEKIDAIDSTIAHFGYYIANKLGFKVALCGEGSD-EIFGGYDLF 348

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                          +     ++      M + V    P M     E       +
Sbjct: 349 KTHARPGALSLYRLNNLHRTDLQRVDRASMRNTVEARVPFMD---AELIDYVLSL 400


>gi|120402525|ref|YP_952354.1| GMP synthase [Mycobacterium vanbaalenii PYR-1]
 gi|119955343|gb|ABM12348.1| GMP synthase (glutamine-hydrolyzing) [Mycobacterium vanbaalenii
           PYR-1]
          Length = 522

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 55/185 (29%), Gaps = 11/185 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+   +       DR+  +  D+G      L       +   + +    
Sbjct: 219 RAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHG------LLRSGERAQVQRDFVAATG 272

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +L    +    +      ++      +  ++            +     +      L  
Sbjct: 273 ANLVTVDVADRFLEALSGVTNPEGKRKIIGREFIRAFEGAVRDALESQDGSDVPVEFLVQ 332

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+            I++      L  +   T+  PL  L K E   + +++G
Sbjct: 333 GTLYPDVVESGGGSGT----ANIKSHHNVGGLPDDLKFTLVEPLRLLFKDEVRAVGRELG 388

Query: 189 GQDLV 193
             + +
Sbjct: 389 LPEEI 393


>gi|76803253|ref|YP_331348.1| argininosuccinate synthase [Natronomonas pharaonis DSM 2160]
 gi|119361295|sp|Q3IME2|ASSY_NATPD RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|76559118|emb|CAI50717.1| argininosuccinate synthase [Natronomonas pharaonis DSM 2160]
          Length = 400

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 25/68 (36%), Gaps = 3/68 (4%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          +       L FSGG D++ C+    +   +D V  ++ D GQ  + E +      + +  
Sbjct: 1  MSDKNRVALAFSGGLDTTVCVPLLEEEYGYDEVIGVTVDVGQ-PEAEFKEAEETAEALDL 59

Query: 63 LMPKWKDS 70
                  
Sbjct: 60 EHHVVDAK 67


>gi|149194636|ref|ZP_01871732.1| Thiamine biosynthesis protein:ExsB [Caminibacter mediatlanticus
          TB-2]
 gi|149135380|gb|EDM23860.1| Thiamine biosynthesis protein:ExsB [Caminibacter mediatlanticus
          TB-2]
          Length = 319

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 25/69 (36%), Gaps = 9/69 (13%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           AL LFSGG DS   +    D+   VE L  + G             ++KI  L      
Sbjct: 2  KALSLFSGGLDSLLAIKLIQDQGIEVEGLYINIGF---------ESNKEKIKYLQEVANK 52

Query: 70 SLGEDHILP 78
             +  ++ 
Sbjct: 53 HNFKLTVID 61


>gi|325281986|ref|YP_004254528.1| tRNA-specific 2-thiouridylase mnmA [Odoribacter splanchnicus DSM
          20712]
 gi|324313795|gb|ADY34348.1| tRNA-specific 2-thiouridylase mnmA [Odoribacter splanchnicus DSM
          20712]
          Length = 349

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 6/31 (19%), Positives = 11/31 (35%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
             ++  SGG DS         +   V  ++
Sbjct: 2  KKVVVGMSGGVDSFVTALLLRRQGYEVIGVT 32


>gi|205373221|ref|ZP_03226025.1| exsB protein [Bacillus coahuilensis m4-4]
          Length = 53

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 6/45 (13%)

Query: 193 VNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEK 237
           +N I E++ TCY G        G GC  CP+C LR  G   + E+
Sbjct: 8   LNYIREKTLTCYNG------MIGDGCGECPSCKLRSAGLFSYLEE 46


>gi|195438780|ref|XP_002067310.1| GK16353 [Drosophila willistoni]
 gi|194163395|gb|EDW78296.1| GK16353 [Drosophila willistoni]
          Length = 380

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 66/219 (30%), Gaps = 12/219 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--------RLCVRK 58
              + ++  SGG DS+       +R   V  +       N     C             +
Sbjct: 1   MIRNVVVGISGGVDSAISAHLLKERGYNVLGVFMRNWDENDEAGRCSGELDLKDAEWACQ 60

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-TFVPGRNIIFLV 117
           ++   + +    + +  +       D     LT N  +    +   +      R  +   
Sbjct: 61  RLDIELRQVN-YVKQYWMAVFTQFLDDYQQGLTPNPDILCNKHIKFDLFHTHCRERLQYD 119

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN-LGMESHVTVHTPLMWLK 176
             AT  Y        +               D  +     ++ +   S      PL  + 
Sbjct: 120 AVATGHYAANSWGNYLEQQLQGEEPRLLIPQDKFKDQTFFLSGISQRSLRHTMFPLGCML 179

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWG 215
           K E  +LA+ IG Q  +    E +  C++GKR+ +   G
Sbjct: 180 KTEVKQLARQIGLQ-RLAEKRESTGICFVGKRNFKSFIG 217


>gi|163781841|ref|ZP_02176841.1| hypothetical protein HG1285_03123 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159883061|gb|EDP76565.1| hypothetical protein HG1285_03123 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 356

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 47/188 (25%), Gaps = 11/188 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR---KKIVELMPK 66
              +  SGG DSS       ++   V  ++  +      E+E    V    K + +    
Sbjct: 2   RVAVGMSGGVDSSVTALLMKEKGHEVIGVTLRFHTIEACEVEGTHNVCCSPKDVQDAARV 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +             +           V    +        V  R +    FA  L    
Sbjct: 62  SQKLGIPHLTFDWERIFKERVIDYF--VEEYSRGRTPNPCAVCNREVKTGYFARYLRAVA 119

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT------VHTPLMWLKKYET 180
            I  +  G            R                + V       +  PL  + K E 
Sbjct: 120 DIDRLATGHYARIEEDPSFGRVIKRGTDRKRDQSYFLALVRREDLDLLEFPLGNMTKEEV 179

Query: 181 WKLAQDIG 188
            +LA+  G
Sbjct: 180 RELARSYG 187


>gi|161529233|ref|YP_001583059.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Nitrosopumilus maritimus SCM1]
 gi|160340534|gb|ABX13621.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Nitrosopumilus maritimus SCM1]
          Length = 337

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 8/33 (24%), Positives = 14/33 (42%)

Query: 6  KKAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
          K+    + L SGG DS   +    ++   V  +
Sbjct: 5  KEKKKVVALLSGGLDSQLAVRMMQEQGFDVSAV 37


>gi|116696467|ref|YP_842043.1| argininosuccinate synthase [Ralstonia eutropha H16]
 gi|113530966|emb|CAJ97313.1| argininosuccinate synthase [Ralstonia eutropha H16]
          Length = 441

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + E      K       +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEPDYEDIPRRAKAYGAEEARLVD 72


>gi|297180723|gb|ADI16931.1| GMP synthase, pp-ATPase domain/subunit [uncultured SAR406 cluster
           bacterium HF0010_18O13]
          Length = 515

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 57/188 (30%), Gaps = 19/188 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K    LL  SGG DSS           + +  +  D+G     E++  +   + +     
Sbjct: 218 KNEKVLLGLSGGVDSSVVAMLLHKAIGNNLICIFVDHGLLRLGEVDEVMSTFESL----- 272

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                L +   L L+ L  +++    + +          N     +++ +L         
Sbjct: 273 DIDIRLVDASELFLSNLSGVTNPEKKRKIIGNTFIEVFENEANKIKDVDWLAQGTIYPDV 332

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +              S   D     I++      L    ++ +  P+  L K E  K+  
Sbjct: 333 IE-------------SSSDDHNSSVIKSHHNVGGLPERMNLKLLEPIRELFKDEVRKIGA 379

Query: 186 DIGGQDLV 193
            +     +
Sbjct: 380 QLDTPKNI 387


>gi|307251114|ref|ZP_07533037.1| Sulfate adenylyltransferase subunit 2 [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|307257947|ref|ZP_07539700.1| Sulfate adenylyltransferase subunit 2 [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306856846|gb|EFM88979.1| Sulfate adenylyltransferase subunit 2 [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306863494|gb|EFM95424.1| Sulfate adenylyltransferase subunit 2 [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 308

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 48/182 (26%), Gaps = 18/182 (9%)

Query: 13  LLFSGGQDSSTCLSWALD----RFDRVE----TLSFDYGQRNKVELECRLCVRKKIVELM 64
           LLFSGG+DS   L+ A          +      +  D G      ++ R    KK+    
Sbjct: 35  LLFSGGKDSVVLLALARKAFQLEGRELVLPFPLVHIDTGHNYPEVIQFRDEQVKKLNA-- 92

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L   H+      G +     T +         L      G + +          
Sbjct: 93  -----KLVVGHVEDSIAKGTVVLRKETDSRNAAQAVTLLETIEANGFDALMGGARRDEEK 147

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                 I     E         R +        ++ G    V    P+    + + W+  
Sbjct: 148 ARAKERIFSFRDEFGQWDPKAQRPELWSLYNAKLHKGENMRV---FPISNWTELDIWQYI 204

Query: 185 QD 186
           + 
Sbjct: 205 ER 206


>gi|307246776|ref|ZP_07528843.1| Sulfate adenylyltransferase subunit 2 [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307255760|ref|ZP_07537562.1| Sulfate adenylyltransferase subunit 2 [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307260212|ref|ZP_07541920.1| Sulfate adenylyltransferase subunit 2 [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306852316|gb|EFM84554.1| Sulfate adenylyltransferase subunit 2 [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306861223|gb|EFM93215.1| Sulfate adenylyltransferase subunit 2 [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306865659|gb|EFM97539.1| Sulfate adenylyltransferase subunit 2 [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 308

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 48/182 (26%), Gaps = 18/182 (9%)

Query: 13  LLFSGGQDSSTCLSWALD----RFDRVE----TLSFDYGQRNKVELECRLCVRKKIVELM 64
           LLFSGG+DS   L+ A          +      +  D G      ++ R    KK+    
Sbjct: 35  LLFSGGKDSVVLLALARKAFQLEGRELVLPFPLVHIDTGHNYPEVIQFRDEQVKKLNA-- 92

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L   H+      G +     T +         L      G + +          
Sbjct: 93  -----KLVVGHVEDSIAKGTVVLRKETDSRNAAQAVTLLETIEANGFDALMGGARRDEEK 147

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                 I     E         R +        ++ G    V    P+    + + W+  
Sbjct: 148 ARAKERIFSFRDEFGQWDPKAQRPELWSLYNAKLHKGENMRV---FPISNWTELDIWQYI 204

Query: 185 QD 186
           + 
Sbjct: 205 ER 206


>gi|260799001|ref|XP_002594488.1| hypothetical protein BRAFLDRAFT_87680 [Branchiostoma floridae]
 gi|229279722|gb|EEN50499.1| hypothetical protein BRAFLDRAFT_87680 [Branchiostoma floridae]
          Length = 383

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/180 (12%), Positives = 42/180 (23%), Gaps = 5/180 (2%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            ++  SGG DSS        +  +V  +            E  +C   +  E        
Sbjct: 6   VVVALSGGVDSSVAALLLKRKGYQVTGVFMRNW---DTVNELGVCQADRDCEDAEYVCRR 62

Query: 71  L-GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           L    H + L         S            N                     +     
Sbjct: 63  LDIPFHQVNLVKDYWNDVFSEMLKEYQHGWTPNPDILCNKRIKFRTFFNYVMDKFEADAL 122

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW-LKKYETWKLAQDIG 188
                   + +        D+ +     ++   +  +      +  L K    ++AQD G
Sbjct: 123 ATGHYARTSIHDVKLLQALDSWKDQTFFLSQIPQQALRRALFPLGELTKPVVKQMAQDAG 182


>gi|190151201|ref|YP_001969726.1| sulfate adenylyltransferase subunit 2 [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|303250906|ref|ZP_07337098.1| sulfate adenylyltransferase subunit 2 [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307253531|ref|ZP_07535400.1| Sulfate adenylyltransferase subunit 2 [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307264551|ref|ZP_07546134.1| Sulfate adenylyltransferase subunit 2 [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|189916332|gb|ACE62584.1| sulfate adenylyltransferase subunit 2 [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|302650256|gb|EFL80420.1| sulfate adenylyltransferase subunit 2 [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306858979|gb|EFM91023.1| Sulfate adenylyltransferase subunit 2 [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306870080|gb|EFN01841.1| Sulfate adenylyltransferase subunit 2 [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 308

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 48/182 (26%), Gaps = 18/182 (9%)

Query: 13  LLFSGGQDSSTCLSWALD----RFDRVE----TLSFDYGQRNKVELECRLCVRKKIVELM 64
           LLFSGG+DS   L+ A          +      +  D G      ++ R    KK+    
Sbjct: 35  LLFSGGKDSVVLLALARKAFQLEGRELVLPFPLVHIDTGHNYPEVIQFRDEQVKKLNA-- 92

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L   H+      G +     T +         L      G + +          
Sbjct: 93  -----KLVVGHVEDSIAKGTVVLRKETDSRNAAQAVTLLETIEANGFDALMGGARRDEEK 147

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                 I     E         R +        ++ G    V    P+    + + W+  
Sbjct: 148 ARAKERIFSFRDEFGQWDPKAQRPELWSLYNAKLHKGENMRV---FPISNWTELDIWQYI 204

Query: 185 QD 186
           + 
Sbjct: 205 ER 206


>gi|165977285|ref|YP_001652878.1| sulfate adenylyltransferase subunit 2 [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|165877386|gb|ABY70434.1| sulfate adenylate transferase subunit 2 [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
          Length = 308

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 48/182 (26%), Gaps = 18/182 (9%)

Query: 13  LLFSGGQDSSTCLSWALD----RFDRVE----TLSFDYGQRNKVELECRLCVRKKIVELM 64
           LLFSGG+DS   L+ A          +      +  D G      ++ R    KK+    
Sbjct: 35  LLFSGGKDSVVLLALARKAFQLEGRELVLPFPLVHIDTGHNYPEVIQFRDEQVKKLNA-- 92

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L   H+      G +     T +         L      G + +          
Sbjct: 93  -----KLVVGHVEDSIAKGTVVLRKETDSRNAAQAVTLLETIEANGFDALMGGARRDEEK 147

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                 I     E         R +        ++ G    V    P+    + + W+  
Sbjct: 148 ARAKERIFSFRDEFGQWDPKAQRPELWSLYNAKLHKGENMRV---FPISNWTELDIWQYI 204

Query: 185 QD 186
           + 
Sbjct: 205 ER 206


>gi|146282652|ref|YP_001172805.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas stutzeri A1501]
 gi|166235074|sp|A4VLW2|MNMA_PSEU5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|145570857|gb|ABP79963.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudomonas stutzeri A1501]
          Length = 375

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 37/133 (27%), Gaps = 5/133 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +    ++  SGG DSS      L++  +VE L     + +     C    ++ + +    
Sbjct: 10  EKTRVIVGMSGGVDSSVSALLLLEQGYQVEGLFMKNWEEDDGTEYC--TAKEDLADAQAV 67

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + H        +   +     +A            +  R  I        A  L
Sbjct: 68  CDRIGIKLHT--ANFAAEYWDNVFEHFLAEYKAGRTPNPDILCNRE-IKFKAFLDYALML 124

Query: 127 GITNIVIGVCETD 139
           G   I  G     
Sbjct: 125 GADLIATGHYVRR 137


>gi|317501433|ref|ZP_07959632.1| argininosuccinate synthase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331088088|ref|ZP_08337009.1| argininosuccinate synthase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|316897177|gb|EFV19249.1| argininosuccinate synthase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330409044|gb|EGG88503.1| argininosuccinate synthase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 411

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 52/175 (29%), Gaps = 11/175 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +    +L +SGG D+S  + W  + +    V  +  + GQ ++++   +  V     +
Sbjct: 1   MSEIKKVVLAYSGGLDTSVIIPWLKEHYDNCEVIAVCGNVGQDDELDDLKQRAVASGASK 60

Query: 63  LM-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           L      D    + ++P    G         +    +   +L    +  R +        
Sbjct: 61  LYVEDLTDEFVNEFVIPTMQAGA--------DYEGYLLGTSLARPILAKRVMEIAKAEGA 112

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
            A   G T         + +         I       ++   +    +     + 
Sbjct: 113 DAVCHGSTGKGNDQVRFELAIMHFAPEMKIITPWREWDIQSRNEEIDYAEAHHIP 167


>gi|300871209|ref|YP_003786082.1| tRNA-(5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Brachyspira pilosicoli 95/1000]
 gi|300688910|gb|ADK31581.1| tRNA-(5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Brachyspira pilosicoli 95/1000]
          Length = 353

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 61/191 (31%), Gaps = 11/191 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIVEL 63
            +  A+ + S G DS+T      ++ + V  ++    D  +R  +   C    + K+VE 
Sbjct: 1   MSKIAVGM-SAGVDSTTTAKLLKEQGNEVFGVTMLLWDGDERAPLAGSCYGPYQNKVVEE 59

Query: 64  MPKWKDSLGED-HILPLAILGDISHSSLTKNV------AMKIQDNNLPNTFVPGRNIIFL 116
             K+   +G D +   ++ L         K+              N    F+   + I  
Sbjct: 60  CKKYAAQIGIDYYAFNVSELFQKKVIDYVKDSYKKGLTPNPCIMCNREIKFMALFDAIEK 119

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
                  +  G    V    E         ++           L  E    +  P+  + 
Sbjct: 120 SGLTFDKFATGHYAGVRYDEEEKRYILLRGKNHIKDQSYFLYRLTQEQLSKIMFPMYEMT 179

Query: 177 KYETWKLAQDI 187
           K ET  LA++ 
Sbjct: 180 KEETRSLAREY 190


>gi|253583644|ref|ZP_04860842.1| argininosuccinate synthase [Fusobacterium varium ATCC 27725]
 gi|251834216|gb|EES62779.1| argininosuccinate synthase [Fusobacterium varium ATCC 27725]
          Length = 399

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 58/215 (26%), Gaps = 32/215 (14%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQR---NKVELECRLCVRKKIVE 62
                +L +SGG D+S  + W  + +   V  ++ D GQ+     VE +       K   
Sbjct: 1   MKEKVVLAYSGGLDTSVIIPWLKENYNFDVIAVAVDVGQKDDFAAVEKKALQIGASKFYA 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
              K  + L  D I+P+   G                              +       +
Sbjct: 61  ADKK--EELVNDFIIPMLKSGAKY--------------EGTYLLGTSIARPVIAKALVEI 104

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A + G   IV G                  A      +       + +      K E   
Sbjct: 105 AQKEGAAYIVHGATGKGNDQVRFELGIKALAP-NMKVIAPWRIWDIKSR-----KQEI-- 156

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
              +      + L  +E +T Y    +  +    G
Sbjct: 157 ---EYLKSHGIELPFKE-NTSYSRDENLFHISHEG 187


>gi|313125718|ref|YP_004035988.1| GMP synthase (glutamine-hydrolyzing) [Halogeometricum borinquense
           DSM 11551]
 gi|312292083|gb|ADQ66543.1| GMP synthase (glutamine-hydrolyzing) [Halogeometricum borinquense
           DSM 11551]
          Length = 305

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 49/180 (27%), Gaps = 28/180 (15%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A++  SGG DSS   + A     D++  +  D G   K E E        +  L      
Sbjct: 24  AIIALSGGVDSSVAAALAYRAIGDQLTPVYVDTGLMRKGETEGIRETFDYMESLRVVEAQ 83

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                       LG +      +     I +               +      A      
Sbjct: 84  D---------RFLGALEGVIDPEEKRKVIGEQF-------------IREFEREAKDTDAN 121

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-VHTPLMWLKKYETWKLAQDIG 188
            +V                  I++      L        +  P+  L K E  ++A+++G
Sbjct: 122 YLVQ----GTIYPDRIESEGNIKSHHNVGGLPDVVDFEGIVEPVRDLYKDEVREVARELG 177


>gi|227546226|ref|ZP_03976275.1| argininosuccinate synthase [Bifidobacterium longum subsp.
          infantis ATCC 55813]
 gi|296453804|ref|YP_003660947.1| argininosuccinate synthase [Bifidobacterium longum subsp. longum
          JDM301]
 gi|322690756|ref|YP_004220326.1| argininosuccinate synthase [Bifidobacterium longum subsp. longum
          JCM 1217]
 gi|227213207|gb|EEI81079.1| argininosuccinate synthase [Bifidobacterium longum subsp.
          infantis ATCC 55813]
 gi|296183235|gb|ADH00117.1| Argininosuccinate synthase [Bifidobacterium longum subsp. longum
          JDM301]
 gi|320455612|dbj|BAJ66234.1| argininosuccinate synthase [Bifidobacterium longum subsp. longum
          JCM 1217]
          Length = 412

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCV 56
          +      +L +SGG D+S  +S+  +R    V  +S D GQ  +     +   
Sbjct: 1  MADNKRIVLAYSGGLDTSVAISYLKERTGKDVVAVSLDVGQGGESLETIKQRA 53


>gi|225681916|gb|EEH20200.1| argininosuccinate synthase [Paracoccidioides brasiliensis Pb03]
          Length = 266

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 23/65 (35%), Gaps = 2/65 (3%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          +       L +SGG D+S  L+W +++   V     D GQ    + E        I    
Sbjct: 1  MPAKEKVCLAYSGGLDTSCILAWLIEQGYDVVCFLADVGQ--AEDFEEAERKALLIGAQK 58

Query: 65 PKWKD 69
              D
Sbjct: 59 LVVAD 63


>gi|213692741|ref|YP_002323327.1| Argininosuccinate synthase [Bifidobacterium longum subsp.
          infantis ATCC 15697]
 gi|254807508|sp|B7GTP0|ASSY_BIFLI RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|213524202|gb|ACJ52949.1| Argininosuccinate synthase [Bifidobacterium longum subsp.
          infantis ATCC 15697]
 gi|320458899|dbj|BAJ69520.1| argininosuccinate synthase [Bifidobacterium longum subsp.
          infantis ATCC 15697]
          Length = 412

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCV 56
          +      +L +SGG D+S  +S+  +R    V  +S D GQ  +     +   
Sbjct: 1  MADNKRIVLAYSGGLDTSVAISYLKERTGKDVVAVSLDVGQGGESLETIKQRA 53


>gi|153813937|ref|ZP_01966605.1| hypothetical protein RUMTOR_00144 [Ruminococcus torques ATCC 27756]
 gi|145848333|gb|EDK25251.1| hypothetical protein RUMTOR_00144 [Ruminococcus torques ATCC 27756]
          Length = 446

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 52/175 (29%), Gaps = 11/175 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +    +L +SGG D+S  + W  + +    V  +  + GQ ++++   +  V     +
Sbjct: 36  MSEIKKVVLAYSGGLDTSVIIPWLKEHYDNCEVIAVCGNVGQDDELDDLKQRAVASGASK 95

Query: 63  LM-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           L      D    + ++P    G         +    +   +L    +  R +        
Sbjct: 96  LYVEDLTDEFVNEFVIPTMQAGA--------DYEGYLLGTSLARPILAKRVMEIAKAEGA 147

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
            A   G T         + +         I       ++   +    +     + 
Sbjct: 148 DAVCHGSTGKGNDQVRFELAIMHFAPEMKIITPWREWDIQSRNEEIDYAEAHHIP 202


>gi|91200744|emb|CAJ73796.1| Strongly similar to argininosuccinate synthetase [Candidatus
          Kuenenia stuttgartiensis]
          Length = 420

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 3/67 (4%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + K+    +L +SGG D+S  + W  +++D  V T++ D G     +LE       KI  
Sbjct: 1  MTKQRKKVVLAYSGGLDTSVAIKWIPEKYDMDVITVTVDLG--AVKDLESIRQKALKIGA 58

Query: 63 LMPKWKD 69
                D
Sbjct: 59 KKAIVVD 65


>gi|23465627|ref|NP_696230.1| argininosuccinate synthase [Bifidobacterium longum NCC2705]
 gi|30172866|sp|Q8G5F2|ASSY_BIFLO RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|23326299|gb|AAN24866.1| argininosuccinate synthase [Bifidobacterium longum NCC2705]
          Length = 412

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCV 56
          +      +L +SGG D+S  +S+  +R    V  +S D GQ  +     +   
Sbjct: 1  MADNKRIVLAYSGGLDTSVAISYLKERTGKDVVAVSLDVGQGGESLETIKQRA 53


>gi|46191095|ref|ZP_00120525.2| COG0137: Argininosuccinate synthase [Bifidobacterium longum
          DJO10A]
 gi|189439673|ref|YP_001954754.1| argininosuccinate synthase [Bifidobacterium longum DJO10A]
 gi|239622229|ref|ZP_04665260.1| argininosuccinate synthase [Bifidobacterium longum subsp.
          infantis CCUG 52486]
 gi|312133074|ref|YP_004000413.1| argg [Bifidobacterium longum subsp. longum BBMN68]
 gi|317481820|ref|ZP_07940848.1| arginosuccinate synthase [Bifidobacterium sp. 12_1_47BFAA]
 gi|322688764|ref|YP_004208498.1| argininosuccinate synthase [Bifidobacterium longum subsp.
          infantis 157F]
 gi|229889862|sp|B3DSY7|ASSY_BIFLD RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|189428108|gb|ACD98256.1| Argininosuccinate synthase [Bifidobacterium longum DJO10A]
 gi|239514226|gb|EEQ54093.1| argininosuccinate synthase [Bifidobacterium longum subsp.
          infantis CCUG 52486]
 gi|291517163|emb|CBK70779.1| argininosuccinate synthase [Bifidobacterium longum subsp. longum
          F8]
 gi|311774067|gb|ADQ03555.1| ArgG [Bifidobacterium longum subsp. longum BBMN68]
 gi|316916757|gb|EFV38151.1| arginosuccinate synthase [Bifidobacterium sp. 12_1_47BFAA]
 gi|320460100|dbj|BAJ70720.1| argininosuccinate synthase [Bifidobacterium longum subsp.
          infantis 157F]
          Length = 412

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCV 56
          +      +L +SGG D+S  +S+  +R    V  +S D GQ  +     +   
Sbjct: 1  MADNKRIVLAYSGGLDTSVAISYLKERTGKDVVAVSLDVGQGGESLETIKQRA 53


>gi|294666592|ref|ZP_06731831.1| tRNA 5-methylaminomethyl-2-thiouridylate -methyltransferase
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
 gi|292603612|gb|EFF47024.1| tRNA 5-methylaminomethyl-2-thiouridylate -methyltransferase
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
          Length = 378

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 46/188 (24%), Gaps = 11/188 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            P  ++  SGG DSS        + + +  L       +          R+  V +    
Sbjct: 3   TPRIVVGVSGGVDSSVAAWKLAQQGEPIAGLFMQNWADDGSGDCRAEDDRRDAVAVCGVL 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                               S + ++   +      PN  V     +        A  LG
Sbjct: 63  GIP------FHFRDFSGEYWSGVFEHFLAEYAAGRTPNPDVLCNREVKFKHFLDAAQALG 116

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G            R                 LG         P+  L+K    +
Sbjct: 117 AERIATGHYAQVAHRGGRWRLLRGADRGKDQSYFLHQLGQTQLAATLFPIGDLEKSTLRR 176

Query: 183 LAQDIGGQ 190
           +AQD G  
Sbjct: 177 IAQDAGLP 184


>gi|262306043|gb|ACY45614.1| gln amidotransferase [Endeis laevis]
          Length = 189

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 2/54 (3%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIV 61
            L+  SGG DS+ C +         +V  +  D G   K E +       K+ 
Sbjct: 40 KVLMFVSGGVDSTVCAALLHKALKPNQVIAVHIDNGFMRKDESKHVEESLNKLG 93


>gi|253576850|ref|ZP_04854175.1| tRNA(Ile)-lysidine synthetase [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251843717|gb|EES71740.1| tRNA(Ile)-lysidine synthetase [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 485

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 59/199 (29%), Gaps = 28/199 (14%)

Query: 12  LLLFSGGQDSSTCLSWALD------RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           ++  SGG DS+  L    +         ++      +G R             +  E + 
Sbjct: 30  VVAVSGGVDSTVLLHIMKEIAGDKALGLQLICAHLHHGLRGDE--------ADRDAEFVR 81

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +  + LG    L  A +      +         +        V  R     +  A  A  
Sbjct: 82  ELAERLGIPFELGYADVRAYMKETGQSLELAAREKRYEYLHQVAERYGASSIALAHHADD 141

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
              T ++  +  +  SG    R                 +V +  PL+ + K +  +  +
Sbjct: 142 QAETVLMRLLRGSGPSGLAGMRPKRREK-----------NVELIRPLLRIYKTDLLQACR 190

Query: 186 DIG---GQDLVNLILEESH 201
           + G    +D  NL  E + 
Sbjct: 191 ESGLAYVEDSSNLDKEMTR 209


>gi|23006868|ref|ZP_00048990.1| COG0137: Argininosuccinate synthase [Magnetospirillum
          magnetotacticum MS-1]
          Length = 142

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 34/87 (39%), Gaps = 10/87 (11%)

Query: 1  MNDI--IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVR 57
          M+D    K     +L +SGG D+S  L W        V T + D GQ  ++E        
Sbjct: 1  MSDASPTKPVKKVVLAYSGGLDTSIILKWLQTTYGCEVVTFTADLGQGEELEP--ARKKA 58

Query: 58 KKIV-----ELMPKWKDSLGEDHILPL 79
          + +        +   ++    D++ P+
Sbjct: 59 ELLGIKPENIFIEDLREEFVRDYVFPM 85


>gi|312216218|emb|CBX96169.1| similar to argininosuccinate synthase [Leptosphaeria maculans]
          Length = 415

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 38/133 (28%), Gaps = 14/133 (10%)

Query: 7   KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
            +   + L +SGG D+ST L W ++    V     + GQ  +   +       KI  L  
Sbjct: 1   MSKGRVCLAYSGGLDTSTILKWLIEEGYEVVCFLANVGQ--EEPWDEVEKKALKIGAL-- 56

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                     ++ L +  +       + V                   +       +A +
Sbjct: 57  ---------KMVILDLQREFVEELCFRAVQCNASYEGRYLLGTSLARPVIARAQIRVAQQ 107

Query: 126 LGITNIVIGVCET 138
            G   +  G    
Sbjct: 108 EGCGFVSHGCTGK 120


>gi|194366501|ref|YP_002029111.1| argininosuccinate synthase [Stenotrophomonas maltophilia R551-3]
 gi|194349305|gb|ACF52428.1| Argininosuccinate synthase [Stenotrophomonas maltophilia R551-3]
          Length = 397

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 24/59 (40%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +L FSGG D+S C+ +  +R   V T+  D G  +  E +       ++      
Sbjct: 3  NKDVVLAFSGGLDTSFCVPYLQERGYNVHTVFADTGGVDDEERDFIEKRAAELGVASHV 61


>gi|108798144|ref|YP_638341.1| GMP synthase [Mycobacterium sp. MCS]
 gi|119867240|ref|YP_937192.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Mycobacterium sp. KMS]
 gi|126433803|ref|YP_001069494.1| GMP synthase [Mycobacterium sp. JLS]
 gi|108768563|gb|ABG07285.1| GMP synthase (glutamine-hydrolyzing) [Mycobacterium sp. MCS]
 gi|119693329|gb|ABL90402.1| GMP synthase (glutamine-hydrolyzing) [Mycobacterium sp. KMS]
 gi|126233603|gb|ABN97003.1| GMP synthase (glutamine-hydrolyzing) [Mycobacterium sp. JLS]
          Length = 519

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 55/183 (30%), Gaps = 14/183 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+   +       DR+  +  D+G      L       +   + +    
Sbjct: 219 RAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHG------LLRSGERAQVQRDFVAATG 272

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +L     + +A       S +T     +        +      +  +  +      L  
Sbjct: 273 ANLV---TVDVADRFLQELSGVTNPEGKRKIIGREFISAFDDAVVDIVGDSGAPVEFLVQ 329

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+            I++      L  +    +  PL  L K E   + +++G
Sbjct: 330 GTLYPDVVESGGGSGT----ANIKSHHNVGGLPADLKFKLVEPLRLLFKDEVRAVGRELG 385

Query: 189 GQD 191
             +
Sbjct: 386 LPE 388


>gi|325294366|ref|YP_004280880.1| hypothetical protein Dester_0164 [Desulfurobacterium
          thermolithotrophum DSM 11699]
 gi|325064814|gb|ADY72821.1| protein of unknown function DUF814 [Desulfurobacterium
          thermolithotrophum DSM 11699]
          Length = 327

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 12/34 (35%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
          +     LLFSGG DS        D    V  +  
Sbjct: 2  ERKKVYLLFSGGLDSIIAAKLLKDLGFEVIGVHI 35


>gi|289523946|ref|ZP_06440800.1| PP-loop family protein [Anaerobaculum hydrogeniformans ATCC
          BAA-1850]
 gi|289502602|gb|EFD23766.1| PP-loop family protein [Anaerobaculum hydrogeniformans ATCC
          BAA-1850]
          Length = 267

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 27/81 (33%), Gaps = 10/81 (12%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + I K  + L+L SGG DSS            V  ++F        E+E    V +    
Sbjct: 9  EYINKYDNILILLSGGLDSSFLAYTCSKVEGNVLAVTFSSPLIPDDEVEEAKKVAETFG- 67

Query: 63 LMPKWKDSLGEDHILPLAILG 83
                    E H++    L 
Sbjct: 68 ---------LEHHVIYSDDLS 79


>gi|316934639|ref|YP_004109621.1| GMP synthase large subunit [Rhodopseudomonas palustris DX-1]
 gi|315602353|gb|ADU44888.1| GMP synthase, large subunit [Rhodopseudomonas palustris DX-1]
          Length = 540

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 59/185 (31%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DS+       +   D++  +  D+G   K E        K +V+L   
Sbjct: 242 SGKVICGLSGGVDSAVAAVLIHEAIGDQLTCVFVDHGLLRKDEG-------KAVVDLFRH 294

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +            LG +   +  +     I    +       R +         A  L
Sbjct: 295 HYNIPLVHVDASETFLGALKGVTDPEQKRKTIGKLFIDVFEAEARRV-------GGADFL 347

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+    +      TI++      L    ++ +  PL  L K E   L ++
Sbjct: 348 AQGTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPARMNMKLVEPLRELFKDEVRALGRE 405

Query: 187 IGGQD 191
           +G  D
Sbjct: 406 LGLPD 410


>gi|224026934|ref|ZP_03645300.1| hypothetical protein BACCOPRO_03693 [Bacteroides coprophilus DSM
           18228]
 gi|224020170|gb|EEF78168.1| hypothetical protein BACCOPRO_03693 [Bacteroides coprophilus DSM
           18228]
          Length = 385

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 47/174 (27%), Gaps = 3/174 (1%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
            L SGG DS+  +    ++  + +      G      L C     + I       +    
Sbjct: 34  ALISGGVDSAVAVHLLCEQGYKPDLFYIRIGMDTDDGLSC--TAEEDIELATATARKYGL 91

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           +  ++ L         + T +   +    N                 A  AY    T   
Sbjct: 92  KLEVVDLQQEYWDRVVAYTIDKVRQGFTPNPDVMCNKLIKFGCFEEKAGHAYDRIATGHY 151

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM-WLKKYETWKLAQ 185
              CE +   +     D ++     +       V+     +  L K E  + A 
Sbjct: 152 ASTCEREGKVWLATAKDPVKDQTDFLAQIDYLQVSRLLFPLGGLMKQEVRETAL 205


>gi|254166581|ref|ZP_04873435.1| hypothetical protein ABOONEI_1673 [Aciduliprofundum boonei T469]
 gi|197624191|gb|EDY36752.1| hypothetical protein ABOONEI_1673 [Aciduliprofundum boonei T469]
          Length = 272

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/254 (12%), Positives = 68/254 (26%), Gaps = 24/254 (9%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-QRNKVELECRLCVRKK----- 59
           K      +  SGG+DS   L +  +R   +     + G   +  ++E  +    K     
Sbjct: 24  KPEGKIAIALSGGKDSMVLLHYFAERDYDIFGYFINLGIGEHSDKMEKLVRNACKEYGVE 83

Query: 60  --IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
             +  L  ++   +      P +  G +    + K               +      F  
Sbjct: 84  LIVTNLREEYGFGIENVRRKPCSACGTVKRYLMNKVPRENGASVVTTGHNMDDFLDFFFK 143

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                 Y+     +     E      P  R   +   +        ++V   +    L K
Sbjct: 144 NTLAKNYQWNRNMVPYLPSEHP-KMLPKIRPLYLLGDKEIGMYAKLNNVPYSSDKCPLAK 202

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYL-----GKRDKRYEWGYGCNS------CPACYL 226
           +  WK        +  N   +   + +       +  +       C        C  C L
Sbjct: 203 FSGWKEIFYEIEAEKKNFRYQMILSIWEMADFFPEERRELRECKKCGEPTSGEICAFCKL 262

Query: 227 RQKGWMEFKEKYQD 240
           R +    +   Y++
Sbjct: 263 RDR----YGNPYKN 272


>gi|118602200|ref|YP_903415.1| argininosuccinate synthase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166989396|sp|A1AVI7|ASSY_RUTMC RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|118567139|gb|ABL01944.1| argininosuccinate synthase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 403

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 57/183 (31%), Gaps = 13/183 (7%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKK 59
           MN I       +L +SGG D+S  + W  D +   V T + D GQ  +VEL         
Sbjct: 1   MNKI--NIKKVVLAYSGGLDTSIIVKWLQDTYRCEVVTFTADIGQGEEVELARTKAKAAG 58

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           + E    + ++L E+ +            +        +   ++    +  R +      
Sbjct: 59  VKE---VYIENLREEFVRDFVF---PMFRANAIYEGEYLLGTSIARPLISKRLVEIAHQE 112

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM----ESHVTVHTPLMWL 175
              A   G T         + + Y       + A     +L        +   H   +  
Sbjct: 113 DADAISHGATGKGNDQVRFELNAYALDADIQVIAPWREWDLSSRESLMDYAQKHGIEIDY 172

Query: 176 KKY 178
           KK 
Sbjct: 173 KKQ 175


>gi|301169106|emb|CBW28703.1| tRNA(Ile)-lysidine synthetase [Haemophilus influenzae 10810]
          Length = 430

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 31/84 (36%), Gaps = 8/84 (9%)

Query: 1  MNDIIKKAPSA-----LLLFSGGQDSSTCL---SWALDRFDRVETLSFDYGQRNKVELEC 52
          +++I K+   A     L+  SGG DS+  L   +    +   +  LS      +      
Sbjct: 4  LSEIEKQLKKATAQAFLIALSGGLDSTVLLSLFAKLRQKQPHLPPLSVRAIHIHHGLSPN 63

Query: 53 RLCVRKKIVELMPKWKDSLGEDHI 76
               K   +L  +++  L  + +
Sbjct: 64 ADSWAKHCQDLCDQFQIPLIIERV 87


>gi|297192617|ref|ZP_06910015.1| bifunctional GMP synthase/glutamine amidotransferase [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|297151442|gb|EFH31171.1| bifunctional GMP synthase/glutamine amidotransferase [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 558

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 18/49 (36%), Gaps = 1/49 (2%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLC 55
              A+   SGG DS+   +        ++  +  D+G   K E E    
Sbjct: 227 TKRAICGLSGGVDSAVAAALVQKAIGSQLTCVYVDHGLMRKGETEQVEK 275


>gi|283469801|emb|CAQ49012.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase) [Staphylococcus
           aureus subsp. aureus ST398]
          Length = 431

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 57/188 (30%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++  S G DS   L   L+ +      +  L  ++G R+    E              ++
Sbjct: 15  VVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEEA-------------RF 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            ++  E H + L I       SL +N +++ +       +      +        A+ L 
Sbjct: 62  LEAYCERHHIDLHIKKLDLSHSLDRNNSIQNEARIKRYEWFDEMMNVLEADVLLTAHHLD 121

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    + +   Y      + R       L       ++ PL+ + K E  +  +  
Sbjct: 122 --------DQLETIIYRIFNGKSTRNKLGFDELSKRKGYQIYRPLLAVSKKEIKQFQERY 173

Query: 188 GGQDLVNL 195
                 + 
Sbjct: 174 HIPYFEDE 181


>gi|281419704|ref|ZP_06250703.1| GMP synthase [Prevotella copri DSM 18205]
 gi|281406233|gb|EFB36913.1| GMP synthase [Prevotella copri DSM 18205]
          Length = 536

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 59/187 (31%), Gaps = 21/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D+G   K E        + ++E     
Sbjct: 214 DKVILGLSGGVDSSVAAVLLNKAIGKNLTCIFVDHGMLRKNE-------FRDVMEDYKCL 266

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             ++                +S      +    +      + GR+ + +  A     + G
Sbjct: 267 GLNVI------------GVDASEKFFADLAGVTDPEKKRKIIGRDFVEVFNAEAK-KQTG 313

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +  G    D     +     I++      L  E ++ +  PL WL K E  ++ + +
Sbjct: 314 AKWLAQGTIYPDRIESLNITGKVIKSHHNVGGLPKEMNLQLCEPLKWLFKDEVRRVGRSM 373

Query: 188 GGQDLVN 194
           G  + + 
Sbjct: 374 GMPEHLI 380


>gi|167568866|ref|ZP_02361740.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           oklahomensis C6786]
          Length = 510

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 43/175 (24%), Gaps = 7/175 (4%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           ++FSGG DS+  L  A      V  +SF  G     ++E       +   +         
Sbjct: 233 VMFSGGIDSAIVLQLAHRYHPDVTAISF--GLPGSNDIEIAHRYCAE-NGIRHVIYTFTK 289

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           +D +  +             +       +            + L    +     G  ++ 
Sbjct: 290 QDLLDNIDDAVYYGEFFEKIDAIDSTIAHFGYYIANKLGFKVALCGEGSD-EIFGGYDLF 348

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                          +     ++      M + V    P M     E       +
Sbjct: 349 KTHARPGALSLYRLNNLHRTDLQRVDRASMRNTVEARVPFMD---AELIDYVLSL 400


>gi|145294778|ref|YP_001137599.1| GMP synthase [Corynebacterium glutamicum R]
 gi|226738428|sp|A4QBV0|GUAA_CORGB RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|140844698|dbj|BAF53697.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 523

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 50/193 (25%), Gaps = 12/193 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
            + I +   A+   SGG DS+   +       DR+  +  D+G     E   R  V K  
Sbjct: 213 REQIGEDGRAICGLSGGVDSAVAGALVQRAIGDRLTCVFVDHGLLRAGE---REQVEKDF 269

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           V              ++ +                   +              +  V   
Sbjct: 270 VAATGA--------KLVTVDERQAFLSKLAGVTEPEAKRKAIGAEFIRSFERAVAGVLEE 321

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
                     +   +               I++      L  +    +  PL  L K E 
Sbjct: 322 APEGSTVDFLVQGTLYPDVVESGGGSGTANIKSHHNVGGLPDDVEFKLVEPLRDLFKDEV 381

Query: 181 WKLAQDIGGQDLV 193
             + +++G  + +
Sbjct: 382 RAVGRELGLPEEI 394


>gi|91091728|ref|XP_967315.1| PREDICTED: similar to argininosuccinate synthetase [Tribolium
          castaneum]
 gi|270001069|gb|EEZ97516.1| hypothetical protein TcasGA2_TC011361 [Tribolium castaneum]
          Length = 409

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
            +L +SGG D+S  L W LD+   V     + GQ    + E      ++I  
Sbjct: 5  KVVLAYSGGLDTSCILRWLLDQNYEVICYMANIGQD--EDFEAARRKAEQIGA 55


>gi|56750177|ref|YP_170878.1| hypothetical protein syc0168_c [Synechococcus elongatus PCC 6301]
 gi|81300196|ref|YP_400404.1| hypothetical protein Synpcc7942_1387 [Synechococcus elongatus PCC
          7942]
 gi|56685136|dbj|BAD78358.1| hypothetical protein [Synechococcus elongatus PCC 6301]
 gi|81169077|gb|ABB57417.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
          Length = 275

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
          ++  PSAL+ +SGG DSS     A     DR   ++         +LE      + +   
Sbjct: 13 LRSFPSALVAYSGGIDSSLVAYLAAQELGDRAIAVTAVSASLLPEDLEAARSQAEWMGIA 72

Query: 64 MPKW 67
            + 
Sbjct: 73 HEQI 76


>gi|19551841|ref|NP_599843.1| GMP synthase [Corynebacterium glutamicum ATCC 13032]
 gi|62389498|ref|YP_224900.1| GMP synthase [Corynebacterium glutamicum ATCC 13032]
 gi|24211741|sp|Q8NSR1|GUAA_CORGL RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|21323372|dbj|BAB98000.1| GMP synthase - PP-ATPase domain [Corynebacterium glutamicum ATCC
           13032]
 gi|41324832|emb|CAF19314.1| PUTATIVE GMP SYNTHASE [Corynebacterium glutamicum ATCC 13032]
          Length = 523

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 50/193 (25%), Gaps = 12/193 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
            + I +   A+   SGG DS+   +       DR+  +  D+G     E   R  V K  
Sbjct: 213 REQIGEDGRAICGLSGGVDSAVAGALVQRAIGDRLTCVFVDHGLLRAGE---REQVEKDF 269

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           V              ++ +                   +              +  V   
Sbjct: 270 VAATGA--------KLVTVDERQAFLSKLAGVTEPEAKRKAIGAEFIRSFERAVAGVLEE 321

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
                     +   +               I++      L  +    +  PL  L K E 
Sbjct: 322 APEGSTVDFLVQGTLYPDVVESGGGSGTANIKSHHNVGGLPDDVEFKLVEPLRDLFKDEV 381

Query: 181 WKLAQDIGGQDLV 193
             + +++G  + +
Sbjct: 382 RAVGRELGLPEEI 394


>gi|90423553|ref|YP_531923.1| PP-loop [Rhodopseudomonas palustris BisB18]
 gi|90105567|gb|ABD87604.1| PP-loop [Rhodopseudomonas palustris BisB18]
          Length = 343

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 59/210 (28%), Gaps = 19/210 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A++ FSGG+DSS  L     R   R+  ++FD G  +   L     V   +       + 
Sbjct: 62  AVVAFSGGKDSSYLLHLLASRFGLRLLAVTFDNGFVSAACLTNMRNVVSALAIDHIIVRH 121

Query: 70  SLGEDHILPL-AILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL------ 122
                + L L + L  +    LTK  +               R  I       +      
Sbjct: 122 RQDHMNALFLESALARVYPDHLTKFGSSVCISCIRIVITTMLRVAIEKNVPLVMLGNTPG 181

Query: 123 -------AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIE----TAINLGMESHVTVHTP 171
                          I   +    ++   +                        +    P
Sbjct: 182 QVLASDQELIFKDNVIPHPLRRQLFARLAERTGSWAYDYLMLSADEYKTRPFPTIVSPLP 241

Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESH 201
           ++   + E +++  ++G     ++    ++
Sbjct: 242 IVGYDEDEIYRVLAELGWSKPTDVDPSSTN 271


>gi|323486209|ref|ZP_08091537.1| hypothetical protein HMPREF9474_03288 [Clostridium symbiosum
          WAL-14163]
 gi|323400427|gb|EGA92797.1| hypothetical protein HMPREF9474_03288 [Clostridium symbiosum
          WAL-14163]
          Length = 275

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 6/73 (8%)

Query: 1  MNDIIKKAPS--ALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRL 54
          +N ++ +       + FSGG DSS  L  A D   +    V  ++F+       +L+   
Sbjct: 13 LNQMMDEYGKGPVCIAFSGGVDSSLLLKIACDNGRKYKTPVYAVTFNTMLHPACDLDTAK 72

Query: 55 CVRKKIVELMPKW 67
           V +++       
Sbjct: 73 KVARELGAEHVVI 85


>gi|271967350|ref|YP_003341546.1| argininosuccinate synthase [Streptosporangium roseum DSM 43021]
 gi|270510525|gb|ACZ88803.1| Argininosuccinate synthase [Streptosporangium roseum DSM 43021]
          Length = 399

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 19/53 (35%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
               +L FSGG D+S  +   A      V  ++ D GQ  +     R     
Sbjct: 1  MNDRVVLAFSGGLDTSVAIPFLAEKTGAEVIAVAVDVGQGGEDMEVIRKRAID 53


>gi|237724458|ref|ZP_04554939.1| tRNA-specific 2-thiouridylase mnmA 3 [Bacteroides sp. D4]
 gi|229437327|gb|EEO47404.1| tRNA-specific 2-thiouridylase mnmA 3 [Bacteroides dorei 5_1_36/D4]
          Length = 364

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/179 (12%), Positives = 45/179 (25%), Gaps = 8/179 (4%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS       ++   V  ++                    ++E     +    E 
Sbjct: 1   MSGGIDSSATCIMLQEQGYEVVGVTMRTWDIPSRFSTPGQDEPDDVLEAKALAERLGIEH 60

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI--- 131
           H+  +          + K+   +      PN  V    +         A +    +I   
Sbjct: 61  HVADV---RKEFKQIIVKHFIDEYMQGRTPNPCVLCNPLFKERILCEWADQTNCAHISTG 117

Query: 132 -VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW-LKKYETWKLAQDIG 188
               + E     Y     D  +     +    +  +      +    K E  +  +  G
Sbjct: 118 HYCRLEERKGKLYIVAGDDQTKDQSYFLWKLPQEILQRFLFPLGTYTKQEVREYLRQKG 176


>gi|195344025|ref|XP_002038591.1| GM10539 [Drosophila sechellia]
 gi|194133612|gb|EDW55128.1| GM10539 [Drosophila sechellia]
          Length = 400

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            + +L +SGG D+S  L W LD+   V  +  D GQ+   +         KI       
Sbjct: 3  TETVILAYSGGLDTSCILKWLLDKQYEVICVLADVGQK--EDFTAAEKKALKIGAKKVIV 60

Query: 68 KD 69
           D
Sbjct: 61 AD 62


>gi|148273738|ref|YP_001223299.1| GMP synthase [Clavibacter michiganensis subsp. michiganensis NCPPB
           382]
 gi|147831668|emb|CAN02637.1| GMP synthase [Clavibacter michiganensis subsp. michiganensis NCPPB
           382]
          Length = 526

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 51/186 (27%), Gaps = 13/186 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +       D++  +  D+G    +  + R  V +  V       
Sbjct: 223 KVICGLSGGVDSAVAAAIVHRAVGDQLTCVFVDHG---LLRHDERRQVEEDYVAATGV-- 277

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                  ++ +                   +                 +     A    I
Sbjct: 278 ------RLVTVDAADQFLDGLTGVTDPEAKRKIIGREFIRSFEGAAEALVLEAKADGEPI 331

Query: 129 TNIVIGVCETD-YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +V G    D            I++      L  +    +  PL  L K E   + +++
Sbjct: 332 RFLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPEDLKFELVEPLRTLFKDEVRAIGREL 391

Query: 188 GGQDLV 193
           G  +++
Sbjct: 392 GLPEVI 397


>gi|145219199|ref|YP_001129908.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prosthecochloris vibrioformis DSM 265]
 gi|205816888|sp|A4SD47|MNMA_PROVI RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|145205363|gb|ABP36406.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chlorobium phaeovibrioides DSM 265]
          Length = 357

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 49/191 (25%), Gaps = 13/191 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +K+  + L+  SGG DS+      +D   RV  L+       +            +    
Sbjct: 1   MKQETTVLVGISGGVDSAVAACMLVDEGYRVIGLNIKVLDSPESNP--------ALQPSS 52

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
               +       +    L       +      +      PN  +     I        A 
Sbjct: 53  LVISNREEFRIPVYTLNLSKRFREDVIGYFQEEYLAARTPNPCIVCNKKIKWAGLLEAAD 112

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDT-----IRAIETAINLGMESHVTVHTPLMWLKKYE 179
            L    +  G   +       CR                 L  +  +    PL  L K E
Sbjct: 113 MLNADLVATGHYASTAFLGGRCRLYQGADKKKDQSYFLWMLQQKELLKTILPLGTLAKPE 172

Query: 180 TWKLAQDIGGQ 190
             +LA+  G  
Sbjct: 173 VRELARSYGVP 183


>gi|15896451|ref|NP_349800.1| cell cycle protein MesJ-like protein [Clostridium acetobutylicum
           ATCC 824]
 gi|61216713|sp|Q97EB0|TILS_CLOAB RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|15026275|gb|AAK81140.1|AE007816_4 Cell cycle protein MesJ ortholog, ATPase of the PP-loop superamily
           [Clostridium acetobutylicum ATCC 824]
 gi|325510609|gb|ADZ22245.1| ATPase of the PP-loop superamily [Clostridium acetobutylicum EA
           2018]
          Length = 461

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 38/143 (26%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           N +IK+    ++  SGG DS   L       D+  T        + +  E      + + 
Sbjct: 12  NSMIKQNDRIVVAVSGGPDSICLLHILFKLKDKFNTSICAAHVNHCIRGEAADKDEEYVK 71

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +   K         +    I  +   SS      ++               I     A  
Sbjct: 72  KFCEKLDIQFYVKRVDVNKIAHEKKISSEMAGREIRYAFFEEVKERFKANKIAIAHNAND 131

Query: 122 LAYRLGITNIVIGVCETDYSGYP 144
            A  + +  I     E      P
Sbjct: 132 QAETIMMRIIRGTGTEGIKGIRP 154


>gi|18976579|ref|NP_577936.1| argininosuccinate synthase [Pyrococcus furiosus DSM 3638]
 gi|24211504|sp|Q8U484|ASSY_PYRFU RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|18892142|gb|AAL80331.1| argininosuccinate synthase [Pyrococcus furiosus DSM 3638]
          Length = 410

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/204 (11%), Positives = 61/204 (29%), Gaps = 15/204 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW- 67
             +L +SGG D+S  L    ++    V T++ D GQ+   + E       K   +   + 
Sbjct: 2   RIVLAYSGGLDTSVILKLMQEKLGAEVITVTVDVGQK--DDFEKIEEKAYKFGAVKHYYI 59

Query: 68  --KDSLGEDHILPLAILGDISHSSLTKNVAMKIQ-------DNNLPNTFVPGRNIIFLVF 118
             K+   E+++        +  ++   + A+          +           +      
Sbjct: 60  DAKEEFAENYVCKAIKANALYENAYPLSTALARPLIVEKLVEVAKKEGAGIIAHGCTGKG 119

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
              + + LGI  ++            +   D          + +   +      +W +  
Sbjct: 120 NDQVRFNLGIKALMPEAEILQPVAEWNLTRDWEMEYAKKHGIPVSDKIYSIDENIWGRSI 179

Query: 179 ETWKLAQDIGGQDLVNLILEESHT 202
           E      +    +    + E + +
Sbjct: 180 E--GGVLEDPSIEPPEEVFEWTVS 201


>gi|315607410|ref|ZP_07882408.1| argininosuccinate synthase [Prevotella buccae ATCC 33574]
 gi|315250910|gb|EFU30901.1| argininosuccinate synthase [Prevotella buccae ATCC 33574]
          Length = 413

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 43/154 (27%), Gaps = 13/154 (8%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M +   K    ++ FSGG D+S  +         V     + G  +  +L+       K+
Sbjct: 12  MAE--NKKKKVVVAFSGGLDTSYTVMKLSQDGWEVYAACANTGGFSAEQLKTNEENAYKL 69

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                           + L +  +    SL   +   +  NN     V    I   +  A
Sbjct: 70  GAKAY-----------VTLDVTQEYYEKSLKYMIFGNVLRNNCYPISVSSERIFQAIAIA 118

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAI 154
             A  +G   I  G                + A 
Sbjct: 119 RYAKEIGADAIAHGSTGAGNDQIRFDMTFLVMAP 152


>gi|313889493|ref|ZP_07823139.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pseudoporcinus SPIN 20026]
 gi|313122105|gb|EFR45198.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus pseudoporcinus SPIN 20026]
          Length = 373

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 34/138 (24%), Gaps = 7/138 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D  K     ++  SGG DSS       ++   V  +             C     +  
Sbjct: 1   MTD--KSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCET 138
             A  LG   +  G    
Sbjct: 114 DYALNLGADYVATGHYAQ 131


>gi|312144175|ref|YP_003995621.1| GMP synthase, large subunit [Halanaerobium sp. 'sapolanicus']
 gi|311904826|gb|ADQ15267.1| GMP synthase, large subunit [Halanaerobium sp. 'sapolanicus']
          Length = 512

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 58/189 (30%), Gaps = 23/189 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DS+   +       D++  +  D+G   K E      VR+   E    
Sbjct: 216 KGKVICGLSGGVDSAVASAIVHKAIGDQLTCIFVDHGLLRKGE---AKQVRRTFGEEFNI 272

Query: 67  WKDSLG--EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
               +   E  +  L+ + +                +         R ++     + +  
Sbjct: 273 PLIYVDAKERFLDKLSGVSEPEAKRKIIGEEFIKVFDEEAEKLENVRYLVQGTIYSDVIE 332

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G                   +  TI++      L  E ++ +  PL +L K E  K+ 
Sbjct: 333 SGG-----------------TEKSATIKSHHNVGGLPDEMNLELVEPLHFLFKDEVRKIG 375

Query: 185 QDIGGQDLV 193
           + +G  + +
Sbjct: 376 EVLGLPEEI 384


>gi|294054375|ref|YP_003548033.1| sulfate adenylyltransferase, small subunit [Coraliomargarita
           akajimensis DSM 45221]
 gi|293613708|gb|ADE53863.1| sulfate adenylyltransferase, small subunit [Coraliomargarita
           akajimensis DSM 45221]
          Length = 304

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/179 (10%), Positives = 44/179 (24%), Gaps = 7/179 (3%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCV 56
           + +   +    +LLFSGG+DS      A   F         +  D G      +E R   
Sbjct: 21  LRETAAQFEKPVLLFSGGKDSIVMAHLAKKAFWPSKLPFPLMHVDTGHNFPETMEYRDRF 80

Query: 57  RKKIVELM--PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF-VPGRNI 113
            K +   +     + ++ E  ++         +   T  +   +++           R+ 
Sbjct: 81  IKDLGAELVVASVQKAIDEGKVVEETGPFASRNGLQTVALLEGLEEGQYDAALGGGRRDE 140

Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
                                  +                      L   + + +   +
Sbjct: 141 EKARAKERFFSHRDAFGQWDPKNQRPELWNIFNGRKHHGEHFRVFPLSNWTEMDIWQYI 199


>gi|225374596|ref|ZP_03751817.1| hypothetical protein ROSEINA2194_00211 [Roseburia inulinivorans DSM
           16841]
 gi|225213548|gb|EEG95902.1| hypothetical protein ROSEINA2194_00211 [Roseburia inulinivorans DSM
           16841]
          Length = 538

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 47/188 (25%), Gaps = 22/188 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS            ++  +  D+G   K E +    V            
Sbjct: 231 KVLLALSGGVDSSVAAGLLSRAIGKQLTCVFVDHGLLRKNEGDEVESV------------ 278

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G +    L  +   +       +A   +               F+      A ++G 
Sbjct: 279 --FGPNGQFDLNFIRVNAQERYYSKLAGVTEPEQKRKII----GEEFIRVFEEEAKKIGA 332

Query: 129 T---NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                      +   SG                         +  PL  L K E  K   
Sbjct: 333 VDFLAQGTIYPDVVESGLGGESAVIKSHHNVGGLPDFVDFKEIIEPLRNLFKDEVRKAGL 392

Query: 186 DIGGQDLV 193
           ++G  + +
Sbjct: 393 ELGIPENL 400


>gi|157693155|ref|YP_001487617.1| tRNA-specific 2-thiouridylase MnmA [Bacillus pumilus SAFR-032]
 gi|194017112|ref|ZP_03055724.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus pumilus ATCC 7061]
 gi|166991121|sp|A8FFP0|MNMA_BACP2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|157681913|gb|ABV63057.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus pumilus SAFR-032]
 gi|194010980|gb|EDW20550.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus pumilus ATCC 7061]
          Length = 372

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 50/190 (26%), Gaps = 12/190 (6%)

Query: 4   IIKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           + K+      ++  SGG DSS       ++   V  +             C     +   
Sbjct: 1   MTKRPEDTRVVVGMSGGVDSSVAALMLKEQGYDVIGIFMKNWDDTDENGVC--TATEDYE 58

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +++          + +            + +    + +    PN  V     I       
Sbjct: 59  DVIRVCNQIGIPYYAVN---FEKQYWDKVFQYFLDEYKAGRTPNPDVMCNKEIKFKAFLE 115

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRH-----DTIRAIETAINLGMESHVTVHTPLMWLK 176
            A  LG   +  G          + +                 L  E    V  P+  L+
Sbjct: 116 HALSLGADYLATGHYARVDRTGDEVKMLRGLDANKDQTYFLNQLTQEQLDKVMFPIGDLE 175

Query: 177 KYETWKLAQD 186
           K    +LA++
Sbjct: 176 KKRVRELAKE 185


>gi|150402069|ref|YP_001329363.1| GMP synthase subunit B [Methanococcus maripaludis C7]
 gi|166215313|sp|A6VFI6|GUAAB_METM7 RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
           AltName: Full=GMP synthetase
 gi|150033099|gb|ABR65212.1| GMP synthase, large subunit [Methanococcus maripaludis C7]
          Length = 310

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 57/187 (30%), Gaps = 26/187 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               ++  SGG DSS     A     D++  +  D G   K E E    + K+ + L   
Sbjct: 21  NRRTIIALSGGVDSSVAAVLADRAIGDKLLAVYVDTGLMRKNESEEIWKIFKEQMGL--- 77

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               + E   + L  L  +      + +                   +F+     +A   
Sbjct: 78  -NLKIVEAKDIFLKELEGVIDPEEKRKIIG----------------RLFIEVFEKVAEEQ 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   +V G              +        I L     + V  PL  L K E   LA+ 
Sbjct: 121 GEEVLVQGTIA-----PDWIESEGQIKTHHNIALPGGMVLDVVEPLRELYKDEVRLLAEA 175

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 176 LGLPDQI 182


>gi|119361287|sp|Q11D10|ASSY_MESSB RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
          Length = 408

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 42/154 (27%), Gaps = 7/154 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K     +L +SGG D+S  L W        V T + D GQ  ++E        + +    
Sbjct: 5   KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEP--ARRKAEMLGIKE 62

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +D   E     +         +        +   ++    +  R +         A 
Sbjct: 63  IHIEDLREEF----VRDFVFPMFRANALYEGTYLLGTSIARPLIAKRLVEIAAETGADAI 118

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI 158
             G T         + + Y       + A     
Sbjct: 119 AHGATGKGNDQVRFELTAYALNPDIKVIAPWRDW 152


>gi|91792628|ref|YP_562279.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Shewanella denitrificans OS217]
 gi|123061095|sp|Q12PS0|GUAA_SHEDO RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|91714630|gb|ABE54556.1| GMP synthase (glutamine-hydrolyzing) [Shewanella denitrificans
           OS217]
          Length = 525

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 53/181 (29%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS            ++  +  D G    + L     V +   +       
Sbjct: 230 VILGLSGGVDSSVVAMLLHRAIGKKLTCVFVDNG---LLRLNEAEQVLEMFGDHFGLNIV 286

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +  ++    A+ G     +  K +     +                      A  L   
Sbjct: 287 HVDAENRFLDAMAGVADPEAKRKIIGRVFVEIFDEE-----------SKKCANAKWLAQG 335

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S         I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 336 TIYPDVIESAGSATGKAHV--IKSHHNVGGLPDDMEMGLVEPLRELFKDEVRKIGLELGL 393

Query: 190 Q 190
            
Sbjct: 394 P 394


>gi|117927897|ref|YP_872448.1| tRNA-specific 2-thiouridylase MnmA [Acidothermus cellulolyticus
           11B]
 gi|166234840|sp|A0LSQ2|MNMA_ACIC1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|117648360|gb|ABK52462.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acidothermus cellulolyticus 11B]
          Length = 362

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 32/134 (23%), Gaps = 1/134 (0%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L   SGG DSS   +  +D    V  +        +   E              +   
Sbjct: 2   RVLAAMSGGVDSSVAAARMVDAGHEVVGVHLALSSTPRSHREGARGCCSLEDARDARRAA 61

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +         +  +     + ++   +      PN  +     I        A  LG  
Sbjct: 62  DVLGIPFYVWDVA-ERFRQDVIEDFLAEYAQGRTPNPCLRCNERIKFAAVLDRALALGFD 120

Query: 130 NIVIGVCETDYSGY 143
            +  G       G 
Sbjct: 121 AVCTGHYARIQRGP 134


>gi|110635672|ref|YP_675880.1| argininosuccinate synthase [Mesorhizobium sp. BNC1]
 gi|110286656|gb|ABG64715.1| argininosuccinate synthase [Chelativorans sp. BNC1]
          Length = 419

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 42/154 (27%), Gaps = 7/154 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K     +L +SGG D+S  L W        V T + D GQ  ++E        + +    
Sbjct: 16  KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEP--ARRKAEMLGIKE 73

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +D   E     +         +        +   ++    +  R +         A 
Sbjct: 74  IHIEDLREEF----VRDFVFPMFRANALYEGTYLLGTSIARPLIAKRLVEIAAETGADAI 129

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI 158
             G T         + + Y       + A     
Sbjct: 130 AHGATGKGNDQVRFELTAYALNPDIKVIAPWRDW 163


>gi|304315387|ref|YP_003850534.1| argininosuccinate synthase [Methanothermobacter marburgensis str.
           Marburg]
 gi|302588846|gb|ADL59221.1| argininosuccinate synthase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 394

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 58/191 (30%), Gaps = 23/191 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L FSGG D+S C+    ++    V T   D GQ  + E+E    V +++       
Sbjct: 2   DKVVLAFSGGLDTSVCIKLLEEKYGMEVITACVDVGQ-PREEVERPARVAEELGNY---- 56

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                + H +      + + + +   +         P +    R +I        A   G
Sbjct: 57  -----KHHTVDARE--EFAENYIFPAIKANAVYEGYPLSTALARPLIAEKIVEV-AESEG 108

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            + I  G        +        R     I    +         + L + E  + A+  
Sbjct: 109 ASAIAHGCTGKGNDQFRFEAVIRSRTDLEVIAPIRD---------LNLTRTEEMEYARSC 159

Query: 188 GGQDLVNLILE 198
           G     + +  
Sbjct: 160 GIPLPSDKLYS 170


>gi|298735957|ref|YP_003728482.1| GMP synthase [Helicobacter pylori B8]
 gi|298355146|emb|CBI66018.1| GMP synthase (glutamine-hydrolysing) [Helicobacter pylori B8]
          Length = 508

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 52/180 (28%), Gaps = 16/180 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DS+   +       D +  +  D+G   K E E    + K +     +  
Sbjct: 211 KVLCAVSGGVDSTVVATLLHRAIKDNLIAVFVDHGLLRKNEKERVQAMFKDL-----QIP 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  +   + L+ L  +S   L + +            F        L        ++  
Sbjct: 266 LNTIDAKGIFLSKLKGVSEPELKRKII----GETFIEVFEKEAKKHHLKG------KIEF 315

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   S         I+       L       +  PL  L K E   L +++G
Sbjct: 316 LAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEVRLLGKELG 375


>gi|225016463|ref|ZP_03705655.1| hypothetical protein CLOSTMETH_00369 [Clostridium methylpentosum
           DSM 5476]
 gi|224950765|gb|EEG31974.1| hypothetical protein CLOSTMETH_00369 [Clostridium methylpentosum
           DSM 5476]
          Length = 510

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 54/189 (28%), Gaps = 24/189 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS   +        ++  +  D+G   K E +       ++      
Sbjct: 215 NGKVLLALSGGVDSSVLAALLSKAIGSQLTCVFVDHGLMRKNEGD-------EVEAAFSD 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           W  +    +     +      S       +  ++              F+      A ++
Sbjct: 268 WDLNFVRVNAEDRFLAKLAGVSDPETKRKIIGEE--------------FIRVFEEEAKKI 313

Query: 127 GI-TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLA 184
           G    +  G    D           I++      L        +  PL  L K E  +L 
Sbjct: 314 GAVDFLAQGTIYPDVIESGTGDAAVIKSHHNVGGLPDYVDFKEIVEPLRLLFKDEVRQLG 373

Query: 185 QDIGGQDLV 193
            ++G  D +
Sbjct: 374 MELGLADYL 382


>gi|217032288|ref|ZP_03437785.1| hypothetical protein HPB128_142g36 [Helicobacter pylori B128]
 gi|216946054|gb|EEC24667.1| hypothetical protein HPB128_142g36 [Helicobacter pylori B128]
          Length = 433

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 52/180 (28%), Gaps = 16/180 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DS+   +       D +  +  D+G   K E E    + K +     +  
Sbjct: 164 KVLCAVSGGVDSTVVATLLHRAIKDNLIAVFVDHGLLRKNEKERVQAMFKDL-----QIP 218

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  +   + L+ L  +S   L + +            F        L        ++  
Sbjct: 219 LNTIDAKGIFLSKLKGVSEPELKRKII----GETFIEVFEKEAKKHHLKG------KIEF 268

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   S         I+       L       +  PL  L K E   L +++G
Sbjct: 269 LAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEVRLLGKELG 328


>gi|261404771|ref|YP_003241012.1| GMP synthase large subunit [Paenibacillus sp. Y412MC10]
 gi|261281234|gb|ACX63205.1| GMP synthase, large subunit [Paenibacillus sp. Y412MC10]
          Length = 512

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 56/187 (29%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS           D++  +  D+G                   L+ K
Sbjct: 217 EKKVLCALSGGVDSSVVAMLIHKAIGDQLTCMFIDHG-------------------LLRK 257

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +     +  +    +  +   +  + ++     ++         N    VF    +   
Sbjct: 258 GEAESVMETFVGKFDMKVVKIDAQERFMSKLKGVDDPEKKRKIIGNEFIYVFDEESSKFD 317

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G   TD          TI++      L  +    +  PL  L K E  K+ ++
Sbjct: 318 DFAFLAQGTLYTDIVESGTDTAHTIKSHHNVGGLPEDMKFELIEPLKALFKDEVRKVGEE 377

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 378 LGLPDEI 384


>gi|20808825|ref|NP_623996.1| ATPase [Thermoanaerobacter tengcongensis MB4]
 gi|254478816|ref|ZP_05092183.1| PP-loop family protein [Carboxydibrachium pacificum DSM 12653]
 gi|20517476|gb|AAM25600.1| predicted ATPase of the PP-loop superfamily implicated in cell
          cycle control [Thermoanaerobacter tengcongensis MB4]
 gi|214035271|gb|EEB75978.1| PP-loop family protein [Carboxydibrachium pacificum DSM 12653]
          Length = 300

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 18/42 (42%)

Query: 2  NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          N + KK    L++ SGG+DS       +     V  +  + G
Sbjct: 41 NKMFKKDDKVLVVVSGGKDSMALWDVLVKEGYNVVAMYINLG 82


>gi|317474596|ref|ZP_07933870.1| tRNA methyl transferase [Bacteroides eggerthii 1_2_48FAA]
 gi|316909277|gb|EFV30957.1| tRNA methyl transferase [Bacteroides eggerthii 1_2_48FAA]
          Length = 357

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 28/76 (36%), Gaps = 3/76 (3%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY---GQRNKVELECRLCVRKKIV 61
          +K     LL  SGG DSS       D    V  ++F +     R +   + R    +  +
Sbjct: 8  MKSKERVLLGMSGGTDSSVAAMRLQDAGYEVTGVTFRFYEVDGRTEYLDDARALAARLGI 67

Query: 62 ELMPKWKDSLGEDHIL 77
          E +      L  + I+
Sbjct: 68 EHVTYDARELFRERII 83


>gi|71892299|ref|YP_278033.1| GMP synthase [Candidatus Blochmannia pennsylvanicus str. BPEN]
 gi|91206795|sp|Q492E5|GUAA_BLOPB RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|71796405|gb|AAZ41156.1| GMP synthase (glutamine-hydrolyzing) [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 525

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 46/184 (25%), Gaps = 17/184 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L FSGG DS             +   +  D G  +  E +              +
Sbjct: 227 NDKVVLGFSGGIDSLVTALLLRRAIGHQFICIYIDNGLLSNYEFD--------------R 272

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            K+    +  L +  L                +        V        +        L
Sbjct: 273 IKNFCALNCNLDIIYLSQEQRFFNALIGVNDPEKKRKIIGRVFTEVFEEQIRNLVAVKWL 332

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+  S         I++          + + +  P+  L K E   +  D
Sbjct: 333 AQGTIYSDVIESGVSLSSFKNV--IKSHHNVGGFCGITDIQLLEPIRNLFKDEVRSIGLD 390

Query: 187 IGGQ 190
           +G  
Sbjct: 391 LGIP 394


>gi|20808849|ref|NP_624020.1| argininosuccinate synthase [Thermoanaerobacter tengcongensis MB4]
 gi|24211498|sp|Q8R7C2|ASSY_THETN RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|20517502|gb|AAM25624.1| Argininosuccinate synthase [Thermoanaerobacter tengcongensis MB4]
          Length = 410

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 51/182 (28%), Gaps = 13/182 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI-VE 62
           + K    +L +SGG D+S  + W  + +   +  +  D GQR  +       +       
Sbjct: 1   MLKGEKVVLAYSGGLDTSVIIPWLKENYECEIIAVCVDVGQREDLRYIKDKALASGASKV 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
            +   K+   +D+I P    G I         +M           +  + +         
Sbjct: 61  YIEDVKEEFVKDYIFPTLKAGAIYEGKYLLGTSMARP-------LIAKKLVEIAHKEGAK 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESHVTVHTPLMWLKKY 178
           A   G T         + S         I A      L        +       + + K 
Sbjct: 114 AIAHGATGKGNDQVRFEVSIRALDPSIKIIAPWRIWELKSREDEIEYAKKKGIPIPVTKE 173

Query: 179 ET 180
           + 
Sbjct: 174 KI 175


>gi|329731094|gb|EGG67466.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus subsp. aureus
           21193]
          Length = 431

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 57/188 (30%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++  S G DS   L   L+ +      +  L  ++G R+    E              ++
Sbjct: 15  VVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEEA-------------RF 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            ++  E H + L I       SL +N +++ +       +      +        A+ L 
Sbjct: 62  LEAYCERHHIDLHIKKLDLSHSLDRNNSIQNEARIKRYEWFDEMMNVLEADVLLTAHHLD 121

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    + +   Y      + R       L       +H PL+ + K E  +  +  
Sbjct: 122 --------DQLETIMYRIFNGKSTRNKLGFDELSKRKGYQIHRPLLAVSKKEIKQFQERY 173

Query: 188 GGQDLVNL 195
                 + 
Sbjct: 174 HIPYFEDE 181


>gi|237709059|ref|ZP_04539540.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|229456755|gb|EEO62476.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 364

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/179 (12%), Positives = 45/179 (25%), Gaps = 8/179 (4%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS       ++   V  ++                    ++E     +    E 
Sbjct: 1   MSGGIDSSATCIMLQEQGYEVVGVTMRTWDVPSRFSTPGQDEPDDVLEAKALAERLGIEH 60

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI--- 131
           H+  +          + K+   +      PN  V    +         A +    +I   
Sbjct: 61  HVADV---RKEFKQIIVKHFIDEYMQGRTPNPCVLCNPLFKERILCEWADQTNCAHISTG 117

Query: 132 -VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW-LKKYETWKLAQDIG 188
               + E     Y     D  +     +    +  +      +    K E  +  +  G
Sbjct: 118 HYCRLEERKGKLYIVAGDDQTKDQSYFLWKLPQEILQRFLFPLGTYTKQEVREYLRQKG 176


>gi|75676328|ref|YP_318749.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Nitrobacter winogradskyi Nb-255]
 gi|91206813|sp|Q3SQP4|GUAA_NITWN RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|74421198|gb|ABA05397.1| GMP synthase (glutamine-hydrolyzing) [Nitrobacter winogradskyi
           Nb-255]
          Length = 535

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 56/186 (30%), Gaps = 17/186 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS       +   D++  +  D+G   K E +        +V+L   
Sbjct: 237 KGRVICGLSGGVDSSVAAILIHEAIGDQLTCVFVDHGMLRKDEGKT-------VVDLFRH 289

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   + +PL  +                +        +              A  L
Sbjct: 290 -------HYNIPLIHVDASKKFLSELAGVTDPEAKRKTIGRLFIDVFEAEAKKIGGADFL 342

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+    +      TI++      L    ++ +  PL  L K E   L ++
Sbjct: 343 AQGTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPDRMNMKLVEPLRELFKDEVRALGRE 400

Query: 187 IGGQDL 192
           +G  ++
Sbjct: 401 LGLPEI 406


>gi|325915390|ref|ZP_08177707.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Xanthomonas vesicatoria ATCC 35937]
 gi|325538437|gb|EGD10116.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Xanthomonas vesicatoria ATCC 35937]
          Length = 378

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 46/188 (24%), Gaps = 11/188 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            P  ++  SGG DSS        + + +  L       +          R+  V +    
Sbjct: 3   TPRIVVGVSGGVDSSVAAWKLAQQGEPIAGLFMQNWADDGSGDCRAEDDRRDAVAVCGVL 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                               S + ++   +      PN  V     +        A  LG
Sbjct: 63  GIP------FHFRDFSGEYWSGVFEHFLAEYAAGRTPNPDVLCNREVKFKHFLDAAQALG 116

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G            R                 LG         P+  L+K    +
Sbjct: 117 AERIATGHYAQVAYRGGRWRLLRGADRGKDQSYFLHQLGQTQLAATVFPIGDLEKSTLRR 176

Query: 183 LAQDIGGQ 190
           +AQD G  
Sbjct: 177 IAQDAGLP 184


>gi|313906605|ref|ZP_07839930.1| GMP synthase, large subunit [Eubacterium cellulosolvens 6]
 gi|313468566|gb|EFR63943.1| GMP synthase, large subunit [Eubacterium cellulosolvens 6]
          Length = 518

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 48/188 (25%), Gaps = 22/188 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS             +  +  D+G   K E +    V            
Sbjct: 221 KVLLALSGGVDSSVAAGLLAKAVGKNLTCVFVDHGLLRKDEGDEVEAV------------ 268

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G      L  +   +     K +A   +               F+      A ++G 
Sbjct: 269 --FGPSGQFDLNFIRVNAQERYYKKLAGVTEPEQKRKII----GEEFIRVFEEEAKKIGA 322

Query: 129 TNIV---IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            + +       +   SG                         +  PL  L K E  K+  
Sbjct: 323 VDYLAQGTIYPDVVESGLGGESATIKSHHNVGGLPEFVDFKEIVEPLRDLFKDEVRKVGL 382

Query: 186 DIGGQDLV 193
            +G  + +
Sbjct: 383 HLGIPEKL 390


>gi|306819006|ref|ZP_07452723.1| argininosuccinate synthase [Mobiluncus mulieris ATCC 35239]
 gi|307700340|ref|ZP_07637380.1| argininosuccinate synthase [Mobiluncus mulieris FB024-16]
 gi|304648199|gb|EFM45507.1| argininosuccinate synthase [Mobiluncus mulieris ATCC 35239]
 gi|307614551|gb|EFN93780.1| argininosuccinate synthase [Mobiluncus mulieris FB024-16]
          Length = 411

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 8  APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQ 44
              +L +SGG D+S  + W  ++    V  +S D GQ
Sbjct: 3  KKRIVLAYSGGLDTSVAIGWMKEKLDVEVIAVSVDCGQ 40


>gi|306819315|ref|ZP_07453024.1| GMP synthase [Mobiluncus mulieris ATCC 35239]
 gi|304647893|gb|EFM45209.1| GMP synthase [Mobiluncus mulieris ATCC 35239]
          Length = 528

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 56/184 (30%), Gaps = 11/184 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DSS   +       D++  +  D+G   K E E    V       M     
Sbjct: 226 VICGLSGGVDSSVAAALVHRAIGDQLTCIFVDHGLLRKGEKE---QVEHDYAAGMGIRVK 282

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            + E        L  +   +  +     I    + +     R +I    AA    +    
Sbjct: 283 YVDESAR----FLTALKGVTEPEQKRKIIGREFIRSFEAAQRAVIAEAGAAGKEVK---F 335

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +    +  PL  L K E   L +++G 
Sbjct: 336 LVQGTLYPDVVESGGGSGTANIKSHHNVGGLPEDLKFELIEPLRQLFKDEVRALGRELGV 395

Query: 190 QDLV 193
            +++
Sbjct: 396 PEVI 399


>gi|302387288|ref|YP_003823110.1| GMP synthase, large subunit [Clostridium saccharolyticum WM1]
 gi|302197916|gb|ADL05487.1| GMP synthase, large subunit [Clostridium saccharolyticum WM1]
          Length = 513

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 44/185 (23%), Gaps = 17/185 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS            ++  +  D+G            +RK   + +    
Sbjct: 217 KVLCALSGGVDSSVAAVMLAKAVGKQLTCVFVDHG-----------LLRKNEGDEVEAVF 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G      L  +   +       +A    ++      + G   I +            
Sbjct: 266 GPAGPY---DLNFIRVNAQDRFYGKLAGV--EDPETKRKIIGEEFIRVFEDEAKKIGKVD 320

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +                                +  PL  L K E  K   ++G
Sbjct: 321 FFVQGTIYPDVIESGLGKSAVIKSHHNVGGLPEHVDFKEIIEPLRLLFKDEVRKAGLELG 380

Query: 189 GQDLV 193
             + +
Sbjct: 381 IPEYL 385


>gi|294668754|ref|ZP_06733847.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria elongata subsp. glycolytica ATCC 29315]
 gi|291309271|gb|EFE50514.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria elongata subsp. glycolytica ATCC 29315]
          Length = 367

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 48/191 (25%), Gaps = 11/191 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN I     + ++  SGG DSS   +    +  +V  +     + +  +  C +      
Sbjct: 1   MN-IDHTQQNIIVGLSGGVDSSVTAALLKQQGYQVRGIFMQNWEDDDNDEYCSIKQ---- 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +       +      + +         ++      +      PN  V     I      
Sbjct: 56  -DSFDAIAVADIIGIDIDIVNFAAQYKDNVFAYFLKEYSAGRTPNPDVLCNAEIKFKCFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A   G   I  G                              L          PL  L
Sbjct: 115 DYAIEQGADTIATGHYARKEVRNGMHYLLKGLDQNKDQSYFLYRLKPFQLERAIFPLGDL 174

Query: 176 KKYETWKLAQD 186
           +K E  +LA +
Sbjct: 175 EKPEVRRLAFE 185


>gi|269977053|ref|ZP_06184027.1| GMP synthase [glutamine-hydrolyzing] [Mobiluncus mulieris 28-1]
 gi|307700094|ref|ZP_07637142.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Mobiluncus mulieris FB024-16]
 gi|269934884|gb|EEZ91444.1| GMP synthase [glutamine-hydrolyzing] [Mobiluncus mulieris 28-1]
 gi|307614744|gb|EFN93965.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Mobiluncus mulieris FB024-16]
          Length = 528

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 56/184 (30%), Gaps = 11/184 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DSS   +       D++  +  D+G   K E E    V       M     
Sbjct: 226 VICGLSGGVDSSVAAALVHRAVGDQLTCIFVDHGLLRKGEKE---QVEHDYAAGMGIRVK 282

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            + E        L  +   +  +     I    + +     R +I    AA    +    
Sbjct: 283 YVDESAR----FLTALKGVTEPEQKRKIIGREFIRSFEAAQRAVIAEAGAAGKEVK---F 335

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +    +  PL  L K E   L +++G 
Sbjct: 336 LVQGTLYPDVVESGGGSGTANIKSHHNVGGLPEDLKFELIEPLRQLFKDEVRALGRELGV 395

Query: 190 QDLV 193
            +++
Sbjct: 396 PEVI 399


>gi|227876039|ref|ZP_03994158.1| GMP synthase (glutamine-hydrolyzing) [Mobiluncus mulieris ATCC
           35243]
 gi|227843338|gb|EEJ53528.1| GMP synthase (glutamine-hydrolyzing) [Mobiluncus mulieris ATCC
           35243]
          Length = 528

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 56/184 (30%), Gaps = 11/184 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DSS   +       D++  +  D+G   K E E    V       M     
Sbjct: 226 VICGLSGGVDSSVAAALVHRAVGDQLTCIFVDHGLLRKGEKE---QVEHDYAAGMGIRVK 282

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            + E        L  +   +  +     I    + +     R +I    AA    +    
Sbjct: 283 YVDESAR----FLTALKGVTEPEQKRKIIGREFIRSFEAAQRAVIAEAGAAGKEVK---F 335

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +    +  PL  L K E   L +++G 
Sbjct: 336 LVQGTLYPDVVESGGGSGTANIKSHHNVGGLPEDLKFELIEPLRQLFKDEVRALGRELGV 395

Query: 190 QDLV 193
            +++
Sbjct: 396 PEVI 399


>gi|166712080|ref|ZP_02243287.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 378

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 47/188 (25%), Gaps = 11/188 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            P  ++  SGG DSS        + + +  L       +          R+  V +    
Sbjct: 3   TPRIVVGVSGGVDSSVAAWKLAQQGEPIAGLFMQNWADDGSGDCRAEDDRRDAVAVCGVL 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +                 S + ++   +      PN  V     +        A  LG
Sbjct: 63  GIA------FHFRDFSGEYWSGVFEHFLAEYAAGRTPNPDVLCNREVKFKHFLDAAQALG 116

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G            R                 LG         P+  L+K    +
Sbjct: 117 AERIATGHYAQVAHRGGRWRLLRGADRGKDQSYFLHQLGQSQLAATLFPIGDLEKSTLRR 176

Query: 183 LAQDIGGQ 190
           +A+D G  
Sbjct: 177 IARDAGLP 184


>gi|188581502|ref|YP_001924947.1| argininosuccinate synthase [Methylobacterium populi BJ001]
 gi|179345000|gb|ACB80412.1| Argininosuccinate synthase [Methylobacterium populi BJ001]
          Length = 413

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/176 (12%), Positives = 44/176 (25%), Gaps = 10/176 (5%)

Query: 1   MNDI--IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVR 57
           M+D    K     +L +SGG D+S  L W        V T + D GQ  ++E        
Sbjct: 1   MSDASPNKSVKKVVLAYSGGLDTSIILKWLQTTYGCEVVTFTADLGQGEELEP--ARRKA 58

Query: 58  KKIV-----ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN 112
           + +        +   ++    D++ P+     +         ++           +  R 
Sbjct: 59  ELLGIKPENIFIEDLREEFVRDYVFPMFRANAVYEGVYLLGTSIARPLIAKKQIEIAERV 118

Query: 113 IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV 168
               V               +G                         +       +
Sbjct: 119 GADAVCHGATGKGNDQVRFELGYYALKPDVTVIAPWREWDLRSREQLIAFAEQHQI 174


>gi|119962972|ref|YP_948566.1| GMP synthase [Arthrobacter aurescens TC1]
 gi|119949831|gb|ABM08742.1| GMP synthase (Glutamine amidotransferase) [Arthrobacter aurescens
           TC1]
          Length = 529

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 48/183 (26%), Gaps = 13/183 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +       D++  +  D+G   + E      V +  V       
Sbjct: 226 KVICGLSGGVDSAVAAALVQRAVGDQLTCVFVDHGLLREGE---AEQVERDFVAATGVNL 282

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E      A+ G         +     +                 + A   A    I
Sbjct: 283 YVANEQERFQSALAG--------VSDPETKRKIIGREFIRAFEEAERAIIAQAAAEGEKI 334

Query: 129 TNIVIGVCETD-YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +V G    D            I++      L  +    +  PL  L K E   +   +
Sbjct: 335 KFLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPEDLQFELVEPLRALFKDEVRAVGAQL 394

Query: 188 GGQ 190
           G  
Sbjct: 395 GLP 397


>gi|311029179|ref|ZP_07707269.1| GMP synthase [Bacillus sp. m3-13]
          Length = 512

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 55/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G            +RK   + + K 
Sbjct: 218 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHG-----------LLRKDEADAVMKT 266

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                  +++ +             N    + D       +    I      A+     G
Sbjct: 267 FSEGFNMNVIKVD------AKDRFLNKLKGVSDPEQKRKIIGNEFIYVFDDEASKLE--G 318

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 319 IDYLAQGTLYTDIIESGTATAQTIKSHHNVGGLPEDMQFQLIEPLNTLFKDEVRALGTEL 378

Query: 188 GGQDLV 193
           G  D +
Sbjct: 379 GIPDEI 384


>gi|298245195|ref|ZP_06969001.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Ktedonobacter racemifer DSM 44963]
 gi|297552676|gb|EFH86541.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Ktedonobacter racemifer DSM 44963]
          Length = 391

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 47/194 (24%), Gaps = 14/194 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN---KVELECRLCVRKKIVELMPK 66
             ++  SGG DSS   +   ++   V  +           + E +    V +     +  
Sbjct: 3   RIVVAMSGGVDSSVAAALLKEQGHEVIGMMLRLWSEPGVIEAEDDGVERVVQNKCCSLES 62

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN----LPNTFVPGRNIIFLVFAATL 122
             D+     +L +            + +     ++      PN  +     I        
Sbjct: 63  VDDARRVARMLDIPFYLVNVEQEFKERIVDSFYEDYVAGRTPNPCLTCNRHIRFTVLLNK 122

Query: 123 AYRLGITNI-------VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
           A  L    +       V    +T                     L          PL   
Sbjct: 123 ALALEADYLATGHYVRVDDHPQTGRRRLRRGLDPDKDQSYVLHVLNQHQLSHACFPLGGY 182

Query: 176 KKYETWKLAQDIGG 189
            K +   +A + G 
Sbjct: 183 TKPQVRAMAAERGM 196


>gi|227875730|ref|ZP_03993858.1| argininosuccinate synthase [Mobiluncus mulieris ATCC 35243]
 gi|269976721|ref|ZP_06183697.1| argininosuccinate synthase [Mobiluncus mulieris 28-1]
 gi|227843672|gb|EEJ53853.1| argininosuccinate synthase [Mobiluncus mulieris ATCC 35243]
 gi|269935086|gb|EEZ91644.1| argininosuccinate synthase [Mobiluncus mulieris 28-1]
          Length = 411

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 8  APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQ 44
              +L +SGG D+S  + W  ++    V  +S D GQ
Sbjct: 3  KKRIVLAYSGGLDTSVAIGWMKEKLDVEVIAVSVDCGQ 40


>gi|90021322|ref|YP_527149.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Saccharophagus degradans 2-40]
 gi|123090544|sp|Q21K42|MNMA_SACD2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|89950922|gb|ABD80937.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Saccharophagus degradans 2-40]
          Length = 380

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 36/137 (26%), Gaps = 7/137 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWK 68
           + ++  SGG DSS        +  +VE L   ++ + +  E    +        +  K  
Sbjct: 20  TVIVGMSGGVDSSVSALLLKQQGYKVEGLFMKNWDEDDGTEYCTAMTDLMDAAAVCQKL- 78

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + H+           +     +             +  R  I        A +LG 
Sbjct: 79  ----DIHLHTANFARQYWDNVFEYFLEEYKACRTPNPDILCNRE-IKFKVFLEYAKKLGA 133

Query: 129 TNIVIGVCETDYSGYPD 145
             I  G           
Sbjct: 134 DYIATGHYTRTSQHEGC 150


>gi|54023384|ref|YP_117626.1| sulfate adenylyltransferase subunit 2 [Nocardia farcinica IFM
           10152]
 gi|54014892|dbj|BAD56262.1| putative sulfate adenylyltransferase subunit 2 [Nocardia farcinica
           IFM 10152]
          Length = 314

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 46/180 (25%), Gaps = 17/180 (9%)

Query: 12  LLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++LFSGG+DS+  L  AL  F         L  D G      LE R  V +K    +   
Sbjct: 45  VILFSGGKDSTVLLHVALKAFWPAPLPFALLHVDTGHNLPEVLEFRDKVVEKYGLRLHVA 104

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                         L D   +     +   +Q   L +     R             R  
Sbjct: 105 S---------VEEYLADGRLTERPDGIRNPLQTVPLLDAISENRFDAVFGGGRRDEERSR 155

Query: 128 ITN-IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I               R +           G    V    PL    + + W+    
Sbjct: 156 AKERIFSLRNAFGQWDPKRQRPELWNLYNGRHAPGEHVRV---FPLSNWTELDIWRYITR 212


>gi|172040081|ref|YP_001799795.1| GMP synthase [Corynebacterium urealyticum DSM 7109]
 gi|171851385|emb|CAQ04361.1| GMP synthase [Corynebacterium urealyticum DSM 7109]
          Length = 523

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 61/193 (31%), Gaps = 12/193 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
            + I +   A+   SGG DS+   +       DR+  +  D+G     E   R  V    
Sbjct: 213 REQIGEDGRAICGLSGGVDSAVAAAIVQRAVGDRLTCVFVDHGLLRAGE---REQVENDF 269

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           V        ++ E      A L  +   +  +     I    + +       ++      
Sbjct: 270 VAATGAKLVTVDER----EAFLKRLDGVTDPEAKRKAIGAEFIRSFERAVAGVLADSPEG 325

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           +    L    +   V E+            I++      L  +    +  PL  L K E 
Sbjct: 326 STVDFLVQGTLYPDVVESGGGSGT----ANIKSHHNVGGLPDDVEFKLVEPLRQLFKDEV 381

Query: 181 WKLAQDIGGQDLV 193
             + +++G  +++
Sbjct: 382 RAVGRELGLPEII 394


>gi|83859053|ref|ZP_00952574.1| argininosuccinate synthase [Oceanicaulis alexandrii HTCC2633]
 gi|83852500|gb|EAP90353.1| argininosuccinate synthase [Oceanicaulis alexandrii HTCC2633]
          Length = 413

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 44/161 (27%), Gaps = 7/161 (4%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
             + +     +L +SGG D+S  L W  D +   V T + D GQ  ++E        +K 
Sbjct: 4   RAMSQNIKKIVLAYSGGLDTSVILKWLQDAYQAEVVTFTADLGQGEELEP--ARRKAEKA 61

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                     + +     +         +        +   ++    +  R +       
Sbjct: 62  G----IKDIYIDDLREEFVRDYVYPMVRANAVYEGQYLLGTSIARPLISKRLVEIAHETG 117

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
             A   G T         +           + A     +L 
Sbjct: 118 ADAVAHGATGKGNDQVRFELGVAALDPSLKVIAPWREWDLN 158


>gi|326938042|gb|AEA13938.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Bacillus thuringiensis serovar chinensis CT-43]
          Length = 512

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 218 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFHMN 274

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G                ++      + G   I++        + G
Sbjct: 275 VIKVDAQERFMNKLKG---------------VEDPEQKRKIIGNEFIYVFDDEASKLQ-G 318

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 319 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 378

Query: 188 GGQDLV 193
           G  D +
Sbjct: 379 GIPDEI 384


>gi|313115553|ref|ZP_07801013.1| argininosuccinate synthase [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310622152|gb|EFQ05647.1| argininosuccinate synthase [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 407

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/175 (12%), Positives = 50/175 (28%), Gaps = 11/175 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +    +L +SGG D+S  + W  + +    V  +  + GQ+ ++E            +
Sbjct: 1   MSEIKKVVLAYSGGLDTSIIIPWLKEHYNNCEVIAVCGNVGQKGELEGLEERAKASGASK 60

Query: 63  LM-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           L      D   ED+++P    G         +    +   +     +  R +        
Sbjct: 61  LYVEDLTDEFVEDYVIPTMQAGA--------DYEGYLLGTSFARPILAKRVVEIAHAEGA 112

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
            A   G T         + +         I       ++        +     + 
Sbjct: 113 DAVCHGSTGKGNDQVRFELAIMHFAPDLKIITPWREWDIQSRDEEIDYAEAHHIP 167


>gi|332654273|ref|ZP_08420017.1| GMP synthase [Ruminococcaceae bacterium D16]
 gi|332517359|gb|EGJ46964.1| GMP synthase [Ruminococcaceae bacterium D16]
          Length = 513

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 57/189 (30%), Gaps = 24/189 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   LL  SGG DSS   +   +    ++  +  D+G     E +       K      +
Sbjct: 218 SGKVLLALSGGVDSSVVAALLAEAVGSQLTCVFVDHGLMRLNEGDEVEQAFSKWDINFVR 277

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                          LG ++  S  ++    I +               +      A ++
Sbjct: 278 VDAEQ--------RFLGKLAGISDPESKRKIIGEEF-------------IRVFEEEAKKI 316

Query: 127 G-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-VHTPLMWLKKYETWKLA 184
           G +  +  G    D           I++      L        +  PL  L K E  +L 
Sbjct: 317 GKVDFLAQGTIYPDVIESGAGDAAVIKSHHNVGGLPDYVDFQEIIEPLRMLFKDEVRQLG 376

Query: 185 QDIGGQDLV 193
           +++G  + +
Sbjct: 377 RELGLPEYL 385


>gi|307354521|ref|YP_003895572.1| GMP synthase large subunit [Methanoplanus petrolearius DSM 11571]
 gi|307157754|gb|ADN37134.1| GMP synthase, large subunit [Methanoplanus petrolearius DSM
          11571]
          Length = 305

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 1/54 (1%)

Query: 9  PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
             ++  SGG DSS C   A     + + ++  D G   K E E    +   + 
Sbjct: 22 KKVVMALSGGVDSSVCAELARRAIGENLISIYVDTGLMRKGETERIRELFSDLN 75


>gi|242398524|ref|YP_002993948.1| predicted ATPase, PP-loop superfamily [Thermococcus sibiricus MM
           739]
 gi|242264917|gb|ACS89599.1| predicted ATPase, PP-loop superfamily [Thermococcus sibiricus MM
           739]
          Length = 203

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 33/103 (32%), Gaps = 4/103 (3%)

Query: 14  LFSGGQDSSTCLSWALDRFDRVETLSFDYG----QRNKVELECRLCVRKKIVELMPKWKD 69
           L+SGG+DSS            V+ ++ ++G     +   E    L    ++  L  K  +
Sbjct: 6   LYSGGKDSSLAAYILKRLGYEVKLVTVNFGVLDSWKYARETAQSLGFEHEVRFLDRKILE 65

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN 112
              E  I        I          +   ++    +    R+
Sbjct: 66  KATEMCIKDNHPNNAIQFIHEMALEEIARCEDVERISDGTRRD 108


>gi|228906038|ref|ZP_04069929.1| GMP synthase, large subunit [Bacillus thuringiensis IBL 200]
 gi|228853608|gb|EEM98374.1| GMP synthase, large subunit [Bacillus thuringiensis IBL 200]
          Length = 515

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 221 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFHMN 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G                ++      + G   I++        + G
Sbjct: 278 VIKVDAQERFMNKLKG---------------VEDPEQKRKIIGNEFIYVFDDEASKLQ-G 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 322 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 381

Query: 188 GGQDLV 193
           G  D +
Sbjct: 382 GIPDEI 387


>gi|228963346|ref|ZP_04124509.1| GMP synthase, large subunit [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228796333|gb|EEM43778.1| GMP synthase, large subunit [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 526

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 232 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFHMN 288

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G                ++      + G   I++        + G
Sbjct: 289 VIKVDAQERFMNKLKG---------------VEDPEQKRKIIGNEFIYVFDDEASKLQ-G 332

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 333 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 392

Query: 188 GGQDLV 193
           G  D +
Sbjct: 393 GIPDEI 398


>gi|229094972|ref|ZP_04225971.1| GMP synthase, large subunit [Bacillus cereus Rock3-29]
 gi|229113925|ref|ZP_04243354.1| GMP synthase, large subunit [Bacillus cereus Rock1-3]
 gi|228669525|gb|EEL24938.1| GMP synthase, large subunit [Bacillus cereus Rock1-3]
 gi|228688442|gb|EEL42321.1| GMP synthase, large subunit [Bacillus cereus Rock3-29]
          Length = 515

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 221 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFHMN 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G                ++      + G   I++        + G
Sbjct: 278 VIKVDAQERFMNKLKG---------------VEDPEQKRKIIGNEFIYVFDDEASKLQ-G 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 322 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 381

Query: 188 GGQDLV 193
           G  D +
Sbjct: 382 GIPDEI 387


>gi|229028112|ref|ZP_04184258.1| GMP synthase, large subunit [Bacillus cereus AH1271]
 gi|229159423|ref|ZP_04287442.1| GMP synthase, large subunit [Bacillus cereus R309803]
 gi|228624053|gb|EEK80860.1| GMP synthase, large subunit [Bacillus cereus R309803]
 gi|228733203|gb|EEL84039.1| GMP synthase, large subunit [Bacillus cereus AH1271]
          Length = 515

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 221 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFHMN 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G                ++      + G   I++        + G
Sbjct: 278 VIKVDAQERFMNKLKG---------------VEDPEQKRKIIGNEFIYVFDDEASKLQ-G 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 322 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 381

Query: 188 GGQDLV 193
           G  D +
Sbjct: 382 GIPDEI 387


>gi|229171103|ref|ZP_04298700.1| GMP synthase, large subunit [Bacillus cereus MM3]
 gi|228612376|gb|EEK69601.1| GMP synthase, large subunit [Bacillus cereus MM3]
          Length = 515

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 221 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFHMN 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G                ++      + G   I++        + G
Sbjct: 278 VIKVDAQERFMNKLKG---------------VEDPEQKRKIIGNEFIYVFDDEASKLQ-G 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 322 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 381

Query: 188 GGQDLV 193
           G  D +
Sbjct: 382 GIPDEI 387


>gi|197103514|ref|YP_002128891.1| argininosuccinate synthase [Phenylobacterium zucineum HLK1]
 gi|196476934|gb|ACG76462.1| argininosuccinate synthase [Phenylobacterium zucineum HLK1]
          Length = 424

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 50/182 (27%), Gaps = 10/182 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKK 59
           M D  K     +L +SGG D+S  L W    +   V T + D GQ  ++    R      
Sbjct: 1   MADK-KPVKKVVLAYSGGLDTSIILKWLQTEYRAEVVTFTADLGQGEELTP-AREKALML 58

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
            ++    + D L E+ +            + T      +   ++    +  R I      
Sbjct: 59  GIKPENIFIDDLREEFVRDFVF---PMFRANTVYEGQYLLGTSIARPLIAKRQIEIARQV 115

Query: 120 ATLAYRLGI----TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
              A   G      + V                   R  +      +      H   +  
Sbjct: 116 GADAVCHGATGKGNDQVRFELGYYALEPDIRVIAPWREWDFRSREALIDFAEKHQIPISK 175

Query: 176 KK 177
            K
Sbjct: 176 DK 177


>gi|218895379|ref|YP_002443790.1| GMP synthase [Bacillus cereus G9842]
 gi|226738384|sp|B7IUT1|GUAA_BACC2 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|218543592|gb|ACK95986.1| GMP synthase [Bacillus cereus G9842]
          Length = 512

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 218 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFHMN 274

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G                ++      + G   I++        + G
Sbjct: 275 VIKVDAQERFMNKLKG---------------VEDPEQKRKIIGNEFIYVFDDEASKLQ-G 318

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 319 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 378

Query: 188 GGQDLV 193
           G  D +
Sbjct: 379 GIPDEI 384


>gi|154685131|ref|YP_001420292.1| GMP synthase [Bacillus amyloliquefaciens FZB42]
 gi|226738381|sp|A7Z235|GUAA_BACA2 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|154350982|gb|ABS73061.1| GuaA [Bacillus amyloliquefaciens FZB42]
          Length = 513

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 54/185 (29%), Gaps = 22/185 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS   +       D++  +  D+G   K E E                
Sbjct: 219 KQVLCALSGGVDSSVVAALIHKAIGDQLTCIFVDHGLLRKGEAE---------------- 262

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL- 126
               G           ++           K++  + P          F+      A +L 
Sbjct: 263 ----GVMKTFSEGFNMNVIKVDAKDRFLNKLKGVSDPEQKRKIIGNEFIYVFDDEADKLK 318

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI  +  G   TD          TI++      L  +    +  PL  L K E   L  +
Sbjct: 319 GIDYLAQGTLYTDIIESGTATAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRALGTE 378

Query: 187 IGGQD 191
           +G  D
Sbjct: 379 LGLPD 383


>gi|109946881|ref|YP_664109.1| tRNA-specific 2-thiouridylase MnmA [Helicobacter acinonychis str.
           Sheeba]
 gi|122973425|sp|Q17Z16|MNMA_HELAH RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|109714102|emb|CAJ99110.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Helicobacter acinonychis str. Sheeba]
          Length = 342

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 49/176 (27%), Gaps = 15/176 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS       ++   +  +         ++L          ++   K  +
Sbjct: 2   KIAVLLSGGVDSSYSAYNLKEQGHELVGIY--------LKLHASEKKHDLYIKNAQKACE 53

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG    L +        S +        ++   PN       ++    A   A +LG  
Sbjct: 54  FLGIP--LEVLDFQKDFKSVVYDAFISAYEEGQTPNPCALCNPLMKFGLALDHALKLGCE 111

Query: 130 NIVIGVCET-----DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            I  G           S   +    T         L  E    +  PL  L K + 
Sbjct: 112 KIATGHYARIEENDKVSYIREALDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDI 167


>gi|75762461|ref|ZP_00742326.1| GMP synthase (glutamine-hydrolyzing) [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|228898997|ref|ZP_04063272.1| GMP synthase, large subunit [Bacillus thuringiensis IBL 4222]
 gi|228937552|ref|ZP_04100193.1| GMP synthase, large subunit [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228970439|ref|ZP_04131093.1| GMP synthase, large subunit [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228977009|ref|ZP_04137416.1| GMP synthase, large subunit [Bacillus thuringiensis Bt407]
 gi|74490054|gb|EAO53405.1| GMP synthase (glutamine-hydrolyzing) [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|228782719|gb|EEM30890.1| GMP synthase, large subunit [Bacillus thuringiensis Bt407]
 gi|228789288|gb|EEM37213.1| GMP synthase, large subunit [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228822126|gb|EEM68113.1| GMP synthase, large subunit [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228860640|gb|EEN05025.1| GMP synthase, large subunit [Bacillus thuringiensis IBL 4222]
          Length = 515

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 221 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFHMN 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G                ++      + G   I++        + G
Sbjct: 278 VIKVDAQERFMNKLKG---------------VEDPEQKRKIIGNEFIYVFDDEASKLQ-G 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 322 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 381

Query: 188 GGQDLV 193
           G  D +
Sbjct: 382 GIPDEI 387


>gi|71900831|ref|ZP_00682949.1| Argininosuccinate synthase [Xylella fastidiosa Ann-1]
 gi|71729401|gb|EAO31514.1| Argininosuccinate synthase [Xylella fastidiosa Ann-1]
          Length = 401

 Score = 46.4 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 27/60 (45%), Gaps = 1/60 (1%)

Query: 7  KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +   ++L FSGG D+S C+ +  ++   V T+  D G  ++ E +       ++     
Sbjct: 1  MSKKNIVLAFSGGLDTSFCIPYLKEQGYAVHTVFTDTGGVDEDERDFIEKRAAELGVASH 60


>gi|325295428|ref|YP_004281942.1| tRNA-specific 2-thiouridylase mnmA [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065876|gb|ADY73883.1| tRNA-specific 2-thiouridylase mnmA [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 350

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 51/187 (27%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              +L FSGG DS        ++  +V  + F       +  E        +        
Sbjct: 2   KKVILGFSGGIDSFYTAYLLKEQRFKVFPVYFKV--LPDISTEKAEESASILG------- 52

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L +  L D     +  +     +    PN        I L +   L+  L  
Sbjct: 53  ------LGLTVIDLSDEFRKKVINHFIEYYKKGLTPNPCAICNKDIKLKYLYELSKELKA 106

Query: 129 TNIVIGVCETDYSGYPDCRH----DTIRAIETAINLGMESHVTVHTPLMWL---KKYETW 181
             I  G            ++       +  E +  L +         L+ L    K E  
Sbjct: 107 DFISTGHYAKVSYFDKWKKNLILRGKDKRKEQSYFLSLVEKFVFQKLLLPLGNFTKEEVV 166

Query: 182 KLAQDIG 188
             AQ++G
Sbjct: 167 LRAQELG 173


>gi|317490186|ref|ZP_07948674.1| tRNA methyl transferase [Eggerthella sp. 1_3_56FAA]
 gi|316910680|gb|EFV32301.1| tRNA methyl transferase [Eggerthella sp. 1_3_56FAA]
          Length = 352

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 55/193 (28%), Gaps = 22/193 (11%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS--FDYGQRNKVELECRLCVRKKIVE 62
           +  +    L  SGG DS+   +  +     V  ++  F      +        V  ++  
Sbjct: 1   MNASGRIALGMSGGVDSAVSAALLMRAGYEVVGVTCRFRDNAATERAAADAAAVCSQLG- 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +  +  + +GE     +        + LT +  +           V              
Sbjct: 60  IRHETPECVGEFERCVVEPFVSSYAAGLTPSPCVGCNARCKMPALVRV------------ 107

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-------TVHTPLMWL 175
           A  LG   I  G            R    RA++   +      +        +  PL  +
Sbjct: 108 ADELGCDRIATGHYARIARLSDSGRFVVKRALDARKDQSYMLSLLSQEQLARLVLPLGAM 167

Query: 176 KKYETWKLAQDIG 188
            K E   +A D+G
Sbjct: 168 TKAEVRVIAADLG 180


>gi|315644384|ref|ZP_07897524.1| tRNA(Ile)-lysidine synthetase [Paenibacillus vortex V453]
 gi|315280261|gb|EFU43553.1| tRNA(Ile)-lysidine synthetase [Paenibacillus vortex V453]
          Length = 476

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 57/188 (30%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRF-----DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           ++  SGG DS   L    +        R+      +G R + + E      + + EL  +
Sbjct: 30  VVAVSGGPDSVALLHVLHEISLNHTPLRLICAHVHHGFRTESDQE-----AEMVRELAER 84

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               L E   + +    + S     +    K  +  L          + L   A      
Sbjct: 85  LGLPL-ETAFIDIPAYMEESGKGGQEAAREKRYEFLLQTAQKYNARSVALAHHADDQAET 143

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +  ++ G      +G    R +                V +  P + + K +  +L + 
Sbjct: 144 VLMRLLRGSGLPGLAGIKFKRTE--------------KKVELIRPFLRMYKADIVELCRV 189

Query: 187 IGGQDLVN 194
            G Q  V+
Sbjct: 190 CGFQYAVD 197


>gi|308174628|ref|YP_003921333.1| argininosuccinate synthase [Bacillus amyloliquefaciens DSM 7]
 gi|307607492|emb|CBI43863.1| argininosuccinate synthase [Bacillus amyloliquefaciens DSM 7]
 gi|328554554|gb|AEB25046.1| argininosuccinate synthase [Bacillus amyloliquefaciens TA208]
 gi|328912958|gb|AEB64554.1| argininosuccinate synthase [Bacillus amyloliquefaciens LL3]
          Length = 403

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          + +    +L +SGG D+S  + W  ++   V     D G
Sbjct: 1  MAEQKKVVLAYSGGLDTSVAIKWLQEQGYDVVACCLDVG 39


>gi|229131264|ref|ZP_04260168.1| GMP synthase, large subunit [Bacillus cereus BDRD-ST196]
 gi|228652202|gb|EEL08135.1| GMP synthase, large subunit [Bacillus cereus BDRD-ST196]
          Length = 515

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G    +  +    V K   E     
Sbjct: 221 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHG---LLRKDEAEGVMKTFSEGFHMN 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G                ++      + G   I++        + G
Sbjct: 278 VIKVDAQERFMNKLKG---------------VEDPEQKRKIIGNEFIYVFDDEASKLQ-G 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 322 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 381

Query: 188 GGQDLV 193
           G  D +
Sbjct: 382 GIPDEI 387


>gi|229009759|ref|ZP_04166981.1| GMP synthase, large subunit [Bacillus mycoides DSM 2048]
 gi|229165241|ref|ZP_04293031.1| GMP synthase, large subunit [Bacillus cereus AH621]
 gi|228618236|gb|EEK75271.1| GMP synthase, large subunit [Bacillus cereus AH621]
 gi|228751519|gb|EEM01323.1| GMP synthase, large subunit [Bacillus mycoides DSM 2048]
          Length = 515

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G    +  +    V K   E     
Sbjct: 221 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHG---LLRKDEAEGVMKTFSEGFHMN 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G                ++      + G   I++        + G
Sbjct: 278 VIKVDAQERFMNKLKG---------------VEDPEQKRKIIGNEFIYVFDDEASKLQ-G 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 322 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 381

Query: 188 GGQDLV 193
           G  D +
Sbjct: 382 GIPDEI 387


>gi|323341584|ref|ZP_08081819.1| GMP synthase [Lactobacillus ruminis ATCC 25644]
 gi|323091000|gb|EFZ33637.1| GMP synthase [Lactobacillus ruminis ATCC 25644]
          Length = 520

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 63/204 (30%), Gaps = 30/204 (14%)

Query: 1   MNDIIKKA----------PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVE 49
           M+D IK               +L  SGG DSS   +       D++  +  D+G   K E
Sbjct: 208 MDDFIKMQVEKIKEEVGDKKVILGLSGGVDSSVTAALLNKAIGDQLTCIFVDHGLLRKNE 267

Query: 50  LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
                 V   + + +      +          LG +   S  +     I        F+ 
Sbjct: 268 ---AQQVMDALGKGLGVNIIKVDAAKR----FLGKLEGVSDPEKKRKIIGAE-----FIE 315

Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
             N   L          G     +    TD +        TI++      L  + H  + 
Sbjct: 316 VFNEEALKLKDVDFLAQGTLYTDVIESGTDTA-------KTIKSHHNVGGLPEDMHFKLI 368

Query: 170 TPLMWLKKYETWKLAQDIGGQDLV 193
            PL  L K ET +L + +G    +
Sbjct: 369 EPLRTLFKDETRELGEKLGIPHEL 392


>gi|261337316|ref|ZP_05965200.1| GMP synthase [Bifidobacterium gallicum DSM 20093]
 gi|270277687|gb|EFA23541.1| GMP synthase [Bifidobacterium gallicum DSM 20093]
          Length = 520

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 55/184 (29%), Gaps = 11/184 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+   +       D++  +  D+G   K E+E    V+   V        
Sbjct: 218 VICGLSGGVDSAVAAALVHKAIGDQLTCVFVDHGLLRKGEVE---QVKHDFVAATGIKLI 274

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++          L  +   S  +     I +  +       R +I    A     +    
Sbjct: 275 AVDASEE----FLSALKGVSEPEKKRKIIGEKFIRTFEQAQRQVIEEAGAQGKEVK---F 327

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +    +  PL  L K E   +  ++G 
Sbjct: 328 LVQGTLYPDVVESGGGDGASNIKSHHNVGGLPDDLKFELIEPLRTLFKDEVRAIGTELGL 387

Query: 190 QDLV 193
            + +
Sbjct: 388 PEEI 391


>gi|254473501|ref|ZP_05086898.1| GMP synthase - glutamine amidotransferase protein [Pseudovibrio sp.
           JE062]
 gi|211957617|gb|EEA92820.1| GMP synthase - glutamine amidotransferase protein [Pseudovibrio sp.
           JE062]
          Length = 515

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 50/184 (27%), Gaps = 17/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS       +   D++  +  D+G     E E      + +      +
Sbjct: 218 KKVICGLSGGVDSSVAAVLIHEAIGDQLTCIYVDHGLMRMGETE------QVLSMFRDHY 271

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              L   H+    +            V  K         F      +             
Sbjct: 272 NIPLV--HVDASDLFIGQLEGESDPEVKRKTIGKLFIEVFEEEAKKLGGADFLAQGT--- 326

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                +     +   +      TI++      L    ++ +  PL  L K E   L +++
Sbjct: 327 -----LYPDVIESVSFTGGPSVTIKSHHNVGGLPERMNMQLVEPLRELFKDEVRDLGREL 381

Query: 188 GGQD 191
           G  D
Sbjct: 382 GLPD 385


>gi|163938259|ref|YP_001643143.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Bacillus weihenstephanensis KBAB4]
 gi|226738389|sp|A9VQG9|GUAA_BACWK RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|163860456|gb|ABY41515.1| GMP synthase, large subunit [Bacillus weihenstephanensis KBAB4]
          Length = 512

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G    +  +    V K   E     
Sbjct: 218 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHG---LLRKDEAEGVMKTFSEGFHMN 274

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G                ++      + G   I++        + G
Sbjct: 275 VIKVDAQERFMNKLKG---------------VEDPEQKRKIIGNEFIYVFDDEASKLQ-G 318

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 319 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 378

Query: 188 GGQDLV 193
           G  D +
Sbjct: 379 GIPDEI 384


>gi|154687066|ref|YP_001422227.1| argininosuccinate synthase [Bacillus amyloliquefaciens FZB42]
 gi|166219946|sp|A7Z7M0|ASSY_BACA2 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|154352917|gb|ABS74996.1| ArgG [Bacillus amyloliquefaciens FZB42]
          Length = 403

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          + +    +L +SGG D+S  + W  ++   V     D G
Sbjct: 1  MAEQKKVVLAYSGGLDTSVAIKWLQEQGYDVVACCLDVG 39


>gi|323452846|gb|EGB08719.1| hypothetical protein AURANDRAFT_26092 [Aureococcus
          anophagefferens]
          Length = 465

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 8  APSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           P  +L +SGG D S+     A ++   V     D GQ + V+      ++ K
Sbjct: 41 KPKIVLAYSGGLDTSTQLAYLAHEKGYEVCAYIADLGQDDVVDAGAIEEIKAK 93


>gi|260893667|ref|YP_003239764.1| argininosuccinate synthase [Ammonifex degensii KC4]
 gi|260865808|gb|ACX52914.1| argininosuccinate synthase [Ammonifex degensii KC4]
          Length = 399

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQ 44
               +L +SGG D+S  + W  +     V  L+ D GQ
Sbjct: 1  MVKKVVLAYSGGLDTSIIIPWLKENYGYEVIALTVDLGQ 39


>gi|296136661|ref|YP_003643903.1| argininosuccinate synthase [Thiomonas intermedia K12]
 gi|295796783|gb|ADG31573.1| argininosuccinate synthase [Thiomonas intermedia K12]
          Length = 446

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 27/72 (37%), Gaps = 3/72 (4%)

Query: 1  MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I++  P      + FSGG D+S  L W   +  +    + + GQ ++ + +      
Sbjct: 1  MATILQNLPTGQKVGIAFSGGLDTSAALLWMQKKGAQPYAYTANLGQPDESDYDDIPRKA 60

Query: 58 KKIVELMPKWKD 69
                  +  D
Sbjct: 61 MGFGAEKARLID 72


>gi|255522399|ref|ZP_05389636.1| tRNA-specific 2-thiouridylase MnmA [Listeria monocytogenes FSL
           J1-175]
          Length = 168

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/130 (10%), Positives = 32/130 (24%), Gaps = 7/130 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS       ++   V  +   ++   ++  +         ++ +  +  
Sbjct: 9   RVVVGMSGGVDSSVTAHILKEQGYDVIGIFMKNWDDTDEFGVCTATEDYDDVIRVANQIG 68

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                     +    +      T  +             +     I        A  LG 
Sbjct: 69  IPYYA-----VNFEKEYWDKVFTYFLDEYKLGRTPNPDVMC-NKEIKFKAFLEHAESLGA 122

Query: 129 TNIVIGVCET 138
             +  G    
Sbjct: 123 DYVATGHYAQ 132


>gi|123968948|ref|YP_001009806.1| hypothetical protein A9601_14151 [Prochlorococcus marinus str.
           AS9601]
 gi|123199058|gb|ABM70699.1| Hypothetical protein A9601_14151 [Prochlorococcus marinus str.
           AS9601]
          Length = 370

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 19/49 (38%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
            ++  SGG DSST L  A +   R   +  D G    +       + K 
Sbjct: 65  CIVGVSGGLDSSTVLIKAKELGLRCLAVHMDNGWDEPLSQRNIEIILKA 113


>gi|189426122|ref|YP_001953299.1| tRNA-specific 2-thiouridylase MnmA [Geobacter lovleyi SZ]
 gi|226704771|sp|B3E966|MNMA_GEOLS RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|189422381|gb|ACD96779.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Geobacter lovleyi SZ]
          Length = 354

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/149 (14%), Positives = 38/149 (25%), Gaps = 10/149 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +  A+ + SGG DSS   +    +   V  ++    +                 +    
Sbjct: 1   MSRIAVAM-SGGVDSSVVAALLQQQGHEVIGITMQLFEPCSSGPGTPAH------DGAQV 53

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   H+L L             +   + +    PN  +    +I        A  L
Sbjct: 54  AAQLGIPHHLLRLEPQFRDLIIDNFID---QYRQGQTPNPCILCNRLIKFGLLLEQAREL 110

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIE 155
           G   +  G       G     H    A +
Sbjct: 111 GAELLATGHYVRRTVGPDGLCHLRTAANQ 139


>gi|76802549|ref|YP_327557.1| NAD synthetase [Natronomonas pharaonis DSM 2160]
 gi|76558414|emb|CAI50005.1| NAD(+) synthase (glutamine-hydrolyzing) 1 [Natronomonas pharaonis
           DSM 2160]
          Length = 275

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 24/72 (33%), Gaps = 2/72 (2%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           A  A+L  SGG DS+T    A+     DRV  +S         +      V   +     
Sbjct: 42  ADRAVLGLSGGIDSTTVAYLAVAALGPDRVHGISMPSSVNPDDDETDAERVANALDIEFD 101

Query: 66  KWKDSLGEDHIL 77
               +   D  +
Sbjct: 102 VIDINPIVDAFV 113


>gi|68171660|ref|ZP_00545023.1| GMP synthase, C-terminal:GMP synthase, N-terminal [Ehrlichia
           chaffeensis str. Sapulpa]
 gi|88658530|ref|YP_506951.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Ehrlichia chaffeensis str. Arkansas]
 gi|123493916|sp|Q2GHY2|GUAA_EHRCR RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|67998919|gb|EAM85608.1| GMP synthase, C-terminal:GMP synthase, N-terminal [Ehrlichia
           chaffeensis str. Sapulpa]
 gi|88599987|gb|ABD45456.1| GMP synthase [Ehrlichia chaffeensis str. Arkansas]
          Length = 526

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 57/186 (30%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS   +       D++  +  D G    +       VR+  V+   + 
Sbjct: 220 KKVIAALSGGVDSSVAAALTYRAIGDQLHCIFIDNG---LLRYNEAEKVRQSFVDQF-QM 275

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             ++ +   + L  L  ++     + +  K              N+ FL+          
Sbjct: 276 PVTIVDRSSVFLDKLQFVTDPEQKRKIIGKTFIEVFEEEANKIGNVEFLMQGTIY----- 330

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                      +  G       TI++      L     + +  PL  L K E   L + +
Sbjct: 331 -------PDVIESGGSVGKESVTIKSHHNVGGLPDIMKLQLVEPLKLLFKDEVRLLGKKL 383

Query: 188 GGQDLV 193
           G  D +
Sbjct: 384 GISDEI 389


>gi|326391356|ref|ZP_08212895.1| Queuosine synthesis-like protein [Thermoanaerobacter ethanolicus JW
           200]
 gi|325992619|gb|EGD51072.1| Queuosine synthesis-like protein [Thermoanaerobacter ethanolicus JW
           200]
          Length = 266

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 46/151 (30%), Gaps = 27/151 (17%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCL---SWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           M + + +  +AL+ FSGG DS+         L   +RV  ++       K EL+  + + 
Sbjct: 1   MQEYLSRLDNALIAFSGGVDSTFLAKVSYDVL--GNRVLAVTATSPMHPKSELKEAVELA 58

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           KKI               ++               ++    +    P             
Sbjct: 59  KKIG----------LPHLVVEFN------------DILEIEEFKKNPLNRCYICKSNLFS 96

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRH 148
               +A   G   I+ G    D S +   R 
Sbjct: 97  RFKAIAEEKGFKYILEGTNADDVSDFRPGRR 127


>gi|295676665|ref|YP_003605189.1| argininosuccinate synthase [Burkholderia sp. CCGE1002]
 gi|295436508|gb|ADG15678.1| argininosuccinate synthase [Burkholderia sp. CCGE1002]
          Length = 443

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 27/72 (37%), Gaps = 3/72 (4%)

Query: 1  MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M+ I++  P      + FSGG D+S  L W   +       + + GQ ++ +        
Sbjct: 1  MSTILESLPIGQKVGIAFSGGLDTSAALHWMRKKGAVPYAYTANLGQPDEDDYNSIPRRA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 TEYGAEGARLID 72


>gi|168070921|ref|XP_001786986.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162660006|gb|EDQ48200.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 257

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/182 (11%), Positives = 43/182 (23%), Gaps = 12/182 (6%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
            SGG DSS        +   V  +   ++   ++          + +  +  +       
Sbjct: 1   MSGGVDSSVTALLLKQQGYDVIGIFMKNWDDTDEFGNCTAEDDAEDVRRVCEQIGIPYYT 60

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
                +    +      +  +             +  R  I      T A  LG   +  
Sbjct: 61  -----VNFEKEYYDKVFSYFLDEYKLGRTPNPDVMCNRE-IKFGEFLTKALNLGAQYVAT 114

Query: 134 GVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
           G                              L  +       P+  L K E  ++A++ G
Sbjct: 115 GHYARVVEQDGVYTLLRGVDSNKDQTYFLNALNQQQLSKAMFPIGHLPKPEVRRIAEEAG 174

Query: 189 GQ 190
             
Sbjct: 175 LY 176


>gi|144898595|emb|CAM75459.1| Argininosuccinate synthase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 404

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 51/174 (29%), Gaps = 9/174 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L +SGG D+S  L W  D++   V T + D GQ  ++E        + +   +   
Sbjct: 6   KKVVLAYSGGLDTSIILRWLQDQYQCEVVTFTADLGQGEELEP--ARKKAQLMG--IKDE 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              + +     +         +      + +   ++    +  R I         A   G
Sbjct: 62  NIFIDDLREEFVRDFVFPMFRANALYEGVYLLGTSIARPLISKRQIEIANQVGADAVSHG 121

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV----TVHTPLMWLKK 177
            T         +   Y       + A     +L   + +      H   +   K
Sbjct: 122 ATGKGNDQVRFELGYYALKPDIKVIAPWRLWDLTSRTKLLDFAEKHQIPIAKDK 175


>gi|154251625|ref|YP_001412449.1| GMP synthase [Parvibaculum lavamentivorans DS-1]
 gi|154155575|gb|ABS62792.1| GMP synthase, large subunit [Parvibaculum lavamentivorans DS-1]
          Length = 526

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 58/184 (31%), Gaps = 17/184 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS       +   D+++ +  D G     E        +++V L   
Sbjct: 228 KGRVICGLSGGVDSSVVAVLLHEAIGDQLQCVFVDTGMMRAGE-------AEQVVSLFRN 280

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +            LG +   S  +     I    +       RNI         A  L
Sbjct: 281 HYNIPLVHRDASDLFLGKLEGVSDPEKKRKIIGATFIDVFEEEARNI-------GGADFL 333

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+    +      TI++      L    ++ +  PL  L K E  +L ++
Sbjct: 334 AQGTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRELGRE 391

Query: 187 IGGQ 190
           +G  
Sbjct: 392 LGLP 395


>gi|116073367|ref|ZP_01470629.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Synechococcus sp. RS9916]
 gi|116068672|gb|EAU74424.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Synechococcus sp. RS9916]
          Length = 520

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/117 (12%), Positives = 33/117 (28%), Gaps = 9/117 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +  SGG DSS   +  ++    VE L+        +      C  + +V+     + 
Sbjct: 157 RVAVGLSGGVDSSLTAALLVEAGWEVEGLTL------WLMSGKGACCAEGLVDAAGICEQ 210

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                H++      +     + + +     +   P         +        A R 
Sbjct: 211 LGVPHHVVD---FREHFKEQIVQFLVDGYAEGVTPLPCSRCNREVKFGPMLAWAERE 264


>gi|48477588|ref|YP_023294.1| GMP synthase subunit B [Picrophilus torridus DSM 9790]
 gi|50400314|sp|Q6L1Q1|GUAAB_PICTO RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
           AltName: Full=GMP synthetase
 gi|48430236|gb|AAT43101.1| glutamine-hydrolyzing GMP synthase [Picrophilus torridus DSM 9790]
          Length = 305

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 62/193 (32%), Gaps = 21/193 (10%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           I K     +L  SGGQDS+     +      + T+  D G     +          I  +
Sbjct: 15  IEKNVKRGILACSGGQDSTLLAVISSMAKTDILTVFIDTGLLRNND----------IKRI 64

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              +        IL  + L      ++T     +                 F+      A
Sbjct: 65  KEIFSSYNVNGRILDRSSLFISRLRNVTDPEEKR-----------KIIGRTFIEVFEEEA 113

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              G  +++ G    D+        DTI++      L  + ++ +  PL  L K E  ++
Sbjct: 114 KNYGAESLLQGTIAPDWIESGGGSRDTIKSHHNVGGLPEKMNLRLVEPLRDLYKDEVREV 173

Query: 184 AQDIGGQDLVNLI 196
           ++ +G  ++    
Sbjct: 174 SRYLGLPEVQPFP 186


>gi|323343956|ref|ZP_08084183.1| argininosuccinate synthase [Prevotella oralis ATCC 33269]
 gi|323095775|gb|EFZ38349.1| argininosuccinate synthase [Prevotella oralis ATCC 33269]
          Length = 399

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 42/149 (28%), Gaps = 13/149 (8%)

Query: 7   KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +    ++ FSGG D S T +  A      V     + G  +  +L+       K+     
Sbjct: 2   EKKKVVVAFSGGLDTSYTVMKLA-QDGYDVYAACANTGGFSAEQLKNNEANAYKLGAKAY 60

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                      + L +  +    SL   +   +  NN     V    I   +  A  A  
Sbjct: 61  -----------VTLDVTQEYYEKSLKYMIFGNVMRNNCYPVSVSSERIFQAIAIARYAKE 109

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAI 154
           +G   I  G                + A 
Sbjct: 110 IGADAIAHGSTGAGNDQIRFDMTFLVMAP 138


>gi|315612149|ref|ZP_07887064.1| tRNA(Ile)-lysidine synthetase [Streptococcus sanguinis ATCC 49296]
 gi|315315710|gb|EFU63747.1| tRNA(Ile)-lysidine synthetase [Streptococcus sanguinis ATCC 49296]
          Length = 425

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/211 (11%), Positives = 48/211 (22%), Gaps = 13/211 (6%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWAL----DRFDRVETLSFDYGQRNKV-ELECRLCVR 57
           +  KK    +L  SGG DS            +    +     ++ QR++    E  L   
Sbjct: 14  EYFKKHSKVVLALSGGLDSMFLFHLLSTYQNELGIELILAHVNHKQRSESDWEENELRKL 73

Query: 58  KKIVELMPKWKDSLGED-----HILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGR 111
               EL        G+                I         V     D+ +    +   
Sbjct: 74  ADAAELPIYITSFSGDFSEARAREFRYDFFRKIMKEVGATALVTAHHADDQVETILMRLI 133

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
               L +   +     +  I I      +              +            +   
Sbjct: 134 RGSRLRYLTGIKESQVVDGIEIIRPLLHFHKKDFPPIVHFE--DQTNQENTYFRNRIRNR 191

Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHT 202
            +   + E  +L   +          + + T
Sbjct: 192 YLPELEKENPRLKSALLDLGREISDYQATIT 222


>gi|312875501|ref|ZP_07735504.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus iners LEAF 2053A-b]
 gi|325912819|ref|ZP_08175197.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus iners UPII 60-B]
 gi|311089012|gb|EFQ47453.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus iners LEAF 2053A-b]
 gi|325477812|gb|EGC80946.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus iners UPII 60-B]
          Length = 375

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 48/186 (25%), Gaps = 13/186 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS       ++   V  +   ++   +   +       + +  +  K  
Sbjct: 8   RVVVGMSGGVDSSVSALLLKEQGYDVVGVFMKNWDDTDDSGVCTATEDFEDVKRVADKIG 67

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                              + + +    + +    PN  +     I        A +L  
Sbjct: 68  IPYYS------INFEKEYWNKVFEYFLSEYKRGRTPNPDIMCNKEIKFKSFLDFAMKLDA 121

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLKKYETWK 182
             I +G      +      H               S V          PL  L K +   
Sbjct: 122 DYIAMGHYAKTVTDENGVVHMMRPKDGNKDQTYFLSQVTQEQLKKAIFPLADLSKPQVRM 181

Query: 183 LAQDIG 188
           +A+  G
Sbjct: 182 IAEQAG 187


>gi|295099800|emb|CBK88889.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Eubacterium cylindroides T2-87]
          Length = 386

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 11/32 (34%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
            L+  SGG DS+       ++   V      
Sbjct: 2  KVLVGLSGGVDSAVAAYLLKEQGYDVTCCFMR 33


>gi|262306031|gb|ACY45608.1| gln amidotransferase [Daphnia magna]
          Length = 193

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 6/71 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALD---RFD---RVETLSFDYGQRNKVELECRLCVRKKI 60
           +    L+L SGG DS+ C +       + D   RV+ +  D G   K E E  +   +++
Sbjct: 43  RDKIVLMLVSGGVDSAVCAALLHKALLQGDDSSRVQAIHIDNGFLRKDESEQVVTSLQQL 102

Query: 61  VELMPKWKDSL 71
              +   K SL
Sbjct: 103 GLNLRVVKASL 113


>gi|237733085|ref|ZP_04563566.1| conserved hypothetical protein [Mollicutes bacterium D7]
 gi|229383887|gb|EEO33978.1| conserved hypothetical protein [Coprobacillus sp. D7]
          Length = 515

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 49/188 (26%), Gaps = 18/188 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS           +++  +  D+G   K E +    V          
Sbjct: 216 NGKVLCALSGGVDSSVAAVLLSKAIGNQLTCVFVDHGLLRKNEGDEVEAV---------- 265

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G D    L  +   +     + +     +       + G   I +          
Sbjct: 266 ----FGPDGQYDLNFIRVNAQERYYEKLKGV--EEPEAKRKIIGEEFIRVFEEEAKKIGT 319

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLAQ 185
               +   +               I++      L        +  PL  L K E  K+  
Sbjct: 320 VDFLVQGTIYPDVVESGLGGESAVIKSHHNVGGLPDAVDFKEIIEPLRDLFKDEVRKVGL 379

Query: 186 DIGGQDLV 193
           ++G  + +
Sbjct: 380 ELGIPEYL 387


>gi|325960077|ref|YP_004291543.1| GMP synthase, large subunit [Methanobacterium sp. AL-21]
 gi|325331509|gb|ADZ10571.1| GMP synthase, large subunit [Methanobacterium sp. AL-21]
          Length = 308

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/183 (13%), Positives = 55/183 (30%), Gaps = 28/183 (15%)

Query: 10  SALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A++  SGG DSS           + +  +  D+G                + E    + 
Sbjct: 23  KAIIALSGGVDSSVASVLTSTAIGENLVAVFVDHG---------------LLREGESDYV 67

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           ++  +D +       ++     ++    ++     P         +F+     +A  +G 
Sbjct: 68  NNTFKDRL-------NLRTVDASEEFLSRLDGVYDPEEKRKIIGEVFIRVFERVAEEVGA 120

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G              +        I L     + +  P+  L K E   +  ++G
Sbjct: 121 EFLVQGTIA-----PDWIESEGQIKSHHNIALPHGLVLNIVEPIRELYKDEVRVVGTELG 175

Query: 189 GQD 191
             +
Sbjct: 176 LPE 178


>gi|319898211|ref|YP_004158304.1| Argininosuccinate synthase [Bartonella clarridgeiae 73]
 gi|319402175|emb|CBI75706.1| Argininosuccinate synthase [Bartonella clarridgeiae 73]
          Length = 407

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 49/155 (31%), Gaps = 7/155 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K     +L +SGG D+S  L W  +  +  V T + D GQ  ++E        + +  + 
Sbjct: 5   KDIKKVVLAYSGGLDTSIILKWLQNELEAEVVTFTADLGQGEELEP--ARRKAEMLG-VK 61

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             + + L E+ +            +      + +   ++    +  R +         A 
Sbjct: 62  KIYIEDLREEFVRDFVF---PMFRANAVYEGVYLLGTSIARPLISKRLVEIAKETNADAI 118

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN 159
             G T         + S Y       I A     N
Sbjct: 119 AHGATGKGNDQVRFELSAYALNPDIKIIAPWRDWN 153


>gi|326774070|ref|ZP_08233352.1| GMP synthase (Glutamine amidotransferase) [Actinomyces viscosus
           C505]
 gi|326636209|gb|EGE37113.1| GMP synthase (Glutamine amidotransferase) [Actinomyces viscosus
           C505]
          Length = 528

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 56/185 (30%), Gaps = 13/185 (7%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DSS   +       D++  +  D+G     E   R  V     E M     
Sbjct: 226 VICGLSGGVDSSVAAALVHRAIGDQLTCIFVDHGLLRAGE---REQVEHDYAEGMGIRVI 282

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++ E      A+ G     +  K +  +   +                  A  A    I 
Sbjct: 283 TVDETERFLNALAGVTEPEAKRKIIGREFIRSFEAAQRRVI--------EAVGAEGGEIR 334

Query: 130 NIVIGVCETD-YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
            +V G    D            I++      L  +    +  PL  L K E   + +++G
Sbjct: 335 FLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPEDLDFELIEPLRELFKDEVRAIGRELG 394

Query: 189 GQDLV 193
             + V
Sbjct: 395 VPEKV 399


>gi|302387387|ref|YP_003823209.1| asparagine synthase [Clostridium saccharolyticum WM1]
 gi|302198015|gb|ADL05586.1| asparagine synthase [Clostridium saccharolyticum WM1]
          Length = 276

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 4/72 (5%)

Query: 13 LLFSGGQDSSTCLSWAL----DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
          L FSGG DSS  L  A          V  ++FD       +LE    V K++  +     
Sbjct: 26 LAFSGGVDSSLLLKVAAEAAEKMGKTVYAVTFDSRLHPSCDLEIAARVAKELGGVHRVVS 85

Query: 69 DSLGEDHILPLA 80
           +  E   +   
Sbjct: 86 VNELEQKEIRFN 97


>gi|239830925|ref|ZP_04679254.1| argininosuccinate synthase [Ochrobactrum intermedium LMG 3301]
 gi|239823192|gb|EEQ94760.1| argininosuccinate synthase [Ochrobactrum intermedium LMG 3301]
          Length = 406

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 7/83 (8%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
          M+   K     +L +SGG D+S  L W        V T + D GQ  ++E        + 
Sbjct: 1  MSKW-KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEP--ARKKAEM 57

Query: 60 IV---ELMPKWKDSLGEDHILPL 79
          +      +   ++    D + P+
Sbjct: 58 LGIKEIFIEDVREEFVRDFVFPM 80


>gi|225626620|ref|ZP_03784659.1| argininosuccinate synthase [Brucella ceti str. Cudo]
 gi|260169657|ref|ZP_05756468.1| argininosuccinate synthase [Brucella sp. F5/99]
 gi|261759189|ref|ZP_06002898.1| argininosuccinate synthase [Brucella sp. F5/99]
 gi|225618277|gb|EEH15320.1| argininosuccinate synthase [Brucella ceti str. Cudo]
 gi|261739173|gb|EEY27169.1| argininosuccinate synthase [Brucella sp. F5/99]
          Length = 406

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 7/83 (8%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
          M+   K     +L +SGG D+S  L W        V T + D GQ  ++E        + 
Sbjct: 1  MSKW-KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEP--ARKKAEM 57

Query: 60 IV---ELMPKWKDSLGEDHILPL 79
          +      +   ++    D + P+
Sbjct: 58 LGIKEIFIEDVREEFVRDFVFPM 80


>gi|172044120|sp|A6WV13|ASSY_OCHA4 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
          Length = 406

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 7/83 (8%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
          M+   K     +L +SGG D+S  L W        V T + D GQ  ++E        + 
Sbjct: 1  MSKW-KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEP--ARKKAEM 57

Query: 60 IV---ELMPKWKDSLGEDHILPL 79
          +      +   ++    D + P+
Sbjct: 58 LGIKEIFIEDVREEFVRDFVFPM 80


>gi|153007431|ref|YP_001368646.1| argininosuccinate synthase [Ochrobactrum anthropi ATCC 49188]
 gi|151559319|gb|ABS12817.1| Argininosuccinate synthase [Ochrobactrum anthropi ATCC 49188]
          Length = 412

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 7/83 (8%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
          M+   K     +L +SGG D+S  L W        V T + D GQ  ++E        + 
Sbjct: 7  MSKW-KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEP--ARKKAEM 63

Query: 60 IV---ELMPKWKDSLGEDHILPL 79
          +      +   ++    D + P+
Sbjct: 64 LGIKEIFIEDVREEFVRDFVFPM 86


>gi|217972560|ref|YP_002357311.1| GMP synthase [Shewanella baltica OS223]
 gi|254800114|sp|B8E9T4|GUAA_SHEB2 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|217497695|gb|ACK45888.1| GMP synthase, large subunit [Shewanella baltica OS223]
          Length = 525

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 48/181 (26%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS            ++  +  D G     E                +  +
Sbjct: 230 VILGLSGGVDSSVVAMLLHRAIGKKLTCVFVDNGLLRLNE--------------AEQVME 275

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+   L +  +   +            +        V              A  L   
Sbjct: 276 MFGDHFGLNIIHVDAENRFLDAMKGEADPEAKRKIIGRVFVEIFDEESKKCANAKWLAQG 335

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S         I++      L     + +  PL  L K E  K+  ++G 
Sbjct: 336 TIYPDVIESAGSATGKAHV--IKSHHNVGGLPDHMELGLVEPLRELFKDEVRKIGLELGL 393

Query: 190 Q 190
            
Sbjct: 394 P 394


>gi|147676842|ref|YP_001211057.1| argininosuccinate synthase [Pelotomaculum thermopropionicum SI]
 gi|189046396|sp|A5D510|ASSY_PELTS RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|146272939|dbj|BAF58688.1| argininosuccinate synthase [Pelotomaculum thermopropionicum SI]
          Length = 401

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 32/80 (40%), Gaps = 2/80 (2%)

Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM-PKW 67
            +L +SGG D+S  + W  +     V  +S D GQ  ++       ++    ++     
Sbjct: 3  KVVLAYSGGLDTSVAIPWLKENYGYEVIAMSADLGQGEELAPLREKAIKSGASKIYIEDV 62

Query: 68 KDSLGEDHILPLAILGDISH 87
          +    ED+I P    G +  
Sbjct: 63 RREFVEDYIFPTLKAGAVYE 82


>gi|160901537|ref|YP_001567118.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Petrotoga mobilis SJ95]
 gi|226739655|sp|A9BER7|GUAA_PETMO RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|160359181|gb|ABX30795.1| GMP synthase, large subunit [Petrotoga mobilis SJ95]
          Length = 507

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 54/183 (29%), Gaps = 18/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             A++  SGG DSS           + ++ +  ++G     E+E      +  + L    
Sbjct: 211 KKAIIALSGGVDSSVAAVLTHRAIGNNLKAIFVNHGFLRMNEVEEVESTFRDYMGLNLTT 270

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D+           L  +   +  +     I +          R              L 
Sbjct: 271 VDAQ-------ERFLSKLKGVTDPEQKRKIIGEEF-------IRVFEQEAKKEEGCEYLI 316

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I   V E+  SG        I++      L  +  + +  PL  L K E   + + +
Sbjct: 317 QGTIYSDVIESAKSGKK---TFKIKSHHNVGGLPEDIDLKIVEPLKELFKDEVRSVGEIL 373

Query: 188 GGQ 190
           G  
Sbjct: 374 GLP 376


>gi|17988153|ref|NP_540787.1| argininosuccinate synthase [Brucella melitensis bv. 1 str. 16M]
 gi|62289060|ref|YP_220853.1| argininosuccinate synthase [Brucella abortus bv. 1 str. 9-941]
 gi|82698997|ref|YP_413571.1| argininosuccinate synthase [Brucella melitensis biovar Abortus
          2308]
 gi|148559600|ref|YP_001258116.1| argininosuccinate synthase [Brucella ovis ATCC 25840]
 gi|161618062|ref|YP_001591949.1| argininosuccinate synthase [Brucella canis ATCC 23365]
 gi|163842349|ref|YP_001626753.1| argininosuccinate synthase [Brucella suis ATCC 23445]
 gi|189023333|ref|YP_001934101.1| argininosuccinate synthase [Brucella abortus S19]
 gi|225851615|ref|YP_002731848.1| argininosuccinate synthase [Brucella melitensis ATCC 23457]
 gi|237814547|ref|ZP_04593545.1| argininosuccinate synthase [Brucella abortus str. 2308 A]
 gi|254690386|ref|ZP_05153640.1| argininosuccinate synthase [Brucella abortus bv. 6 str. 870]
 gi|254694874|ref|ZP_05156702.1| argininosuccinate synthase [Brucella abortus bv. 3 str. Tulya]
 gi|254696503|ref|ZP_05158331.1| argininosuccinate synthase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254700888|ref|ZP_05162716.1| argininosuccinate synthase [Brucella suis bv. 5 str. 513]
 gi|254705253|ref|ZP_05167081.1| argininosuccinate synthase [Brucella suis bv. 3 str. 686]
 gi|254707225|ref|ZP_05169053.1| argininosuccinate synthase [Brucella pinnipedialis M163/99/10]
 gi|254709230|ref|ZP_05171041.1| argininosuccinate synthase [Brucella pinnipedialis B2/94]
 gi|254713347|ref|ZP_05175158.1| argininosuccinate synthase [Brucella ceti M644/93/1]
 gi|254716299|ref|ZP_05178110.1| argininosuccinate synthase [Brucella ceti M13/05/1]
 gi|254718294|ref|ZP_05180105.1| argininosuccinate synthase [Brucella sp. 83/13]
 gi|254731416|ref|ZP_05189994.1| argininosuccinate synthase [Brucella abortus bv. 4 str. 292]
 gi|256030753|ref|ZP_05444367.1| argininosuccinate synthase [Brucella pinnipedialis M292/94/1]
 gi|256045866|ref|ZP_05448740.1| argininosuccinate synthase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256060218|ref|ZP_05450394.1| argininosuccinate synthase [Brucella neotomae 5K33]
 gi|256112579|ref|ZP_05453500.1| argininosuccinate synthase [Brucella melitensis bv. 3 str. Ether]
 gi|256158771|ref|ZP_05456637.1| argininosuccinate synthase [Brucella ceti M490/95/1]
 gi|256254158|ref|ZP_05459694.1| argininosuccinate synthase [Brucella ceti B1/94]
 gi|256258640|ref|ZP_05464176.1| argininosuccinate synthase [Brucella abortus bv. 9 str. C68]
 gi|256264874|ref|ZP_05467406.1| argininosuccinate synthase [Brucella melitensis bv. 2 str. 63/9]
 gi|256368540|ref|YP_003106046.1| argininosuccinate synthase [Brucella microti CCM 4915]
 gi|260546353|ref|ZP_05822093.1| argininosuccinate synthase [Brucella abortus NCTC 8038]
 gi|260563153|ref|ZP_05833639.1| argininosuccinate synthase [Brucella melitensis bv. 1 str. 16M]
 gi|260567280|ref|ZP_05837750.1| argininosuccinate synthase [Brucella suis bv. 4 str. 40]
 gi|260755930|ref|ZP_05868278.1| argininosuccinate synthase [Brucella abortus bv. 6 str. 870]
 gi|260759154|ref|ZP_05871502.1| argininosuccinate synthase [Brucella abortus bv. 4 str. 292]
 gi|260760878|ref|ZP_05873221.1| argininosuccinate synthase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260884954|ref|ZP_05896568.1| argininosuccinate synthase [Brucella abortus bv. 9 str. C68]
 gi|261215205|ref|ZP_05929486.1| argininosuccinate synthase [Brucella abortus bv. 3 str. Tulya]
 gi|261218077|ref|ZP_05932358.1| argininosuccinate synthase [Brucella ceti M13/05/1]
 gi|261221304|ref|ZP_05935585.1| argininosuccinate synthase [Brucella ceti B1/94]
 gi|261314708|ref|ZP_05953905.1| argininosuccinate synthase [Brucella pinnipedialis M163/99/10]
 gi|261316733|ref|ZP_05955930.1| argininosuccinate synthase [Brucella pinnipedialis B2/94]
 gi|261321076|ref|ZP_05960273.1| argininosuccinate synthase [Brucella ceti M644/93/1]
 gi|261324191|ref|ZP_05963388.1| argininosuccinate synthase [Brucella neotomae 5K33]
 gi|261751400|ref|ZP_05995109.1| argininosuccinate synthase [Brucella suis bv. 5 str. 513]
 gi|261755963|ref|ZP_05999672.1| argininosuccinate synthase [Brucella suis bv. 3 str. 686]
 gi|265983254|ref|ZP_06095989.1| argininosuccinate synthase [Brucella sp. 83/13]
 gi|265987804|ref|ZP_06100361.1| argininosuccinate synthase [Brucella pinnipedialis M292/94/1]
 gi|265992280|ref|ZP_06104837.1| argininosuccinate synthase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265994020|ref|ZP_06106577.1| argininosuccinate synthase [Brucella melitensis bv. 3 str. Ether]
 gi|265997266|ref|ZP_06109823.1| argininosuccinate synthase [Brucella ceti M490/95/1]
 gi|294851479|ref|ZP_06792152.1| argininosuccinate synthase [Brucella sp. NVSL 07-0026]
 gi|297247477|ref|ZP_06931195.1| argininosuccinate synthase [Brucella abortus bv. 5 str. B3196]
 gi|306838905|ref|ZP_07471733.1| argininosuccinate synthase [Brucella sp. NF 2653]
 gi|306842620|ref|ZP_07475269.1| argininosuccinate synthase [Brucella sp. BO2]
 gi|306846342|ref|ZP_07478893.1| argininosuccinate synthase [Brucella sp. BO1]
 gi|24211509|sp|Q8YEK8|ASSY_BRUME RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|75505369|sp|Q57FU2|ASSY_BRUAB RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|119361259|sp|Q2YPQ8|ASSY_BRUA2 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|166219948|sp|A5VN19|ASSY_BRUO2 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|189046382|sp|A9M6S7|ASSY_BRUC2 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|189046383|sp|B0CII7|ASSY_BRUSI RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|229889863|sp|B2S7X3|ASSY_BRUA1 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|254807511|sp|C0RGD6|ASSY_BRUMB RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|17983911|gb|AAL53051.1| argininosuccinate synthase [Brucella melitensis bv. 1 str. 16M]
 gi|62195192|gb|AAX73492.1| ArgG, argininosuccinate synthase [Brucella abortus bv. 1 str.
          9-941]
 gi|82615098|emb|CAJ10027.1| Argininosuccinate synthase [Brucella melitensis biovar Abortus
          2308]
 gi|148370857|gb|ABQ60836.1| argininosuccinate synthase [Brucella ovis ATCC 25840]
 gi|161334873|gb|ABX61178.1| argininosuccinate synthase [Brucella canis ATCC 23365]
 gi|163673072|gb|ABY37183.1| argininosuccinate synthase [Brucella suis ATCC 23445]
 gi|189018905|gb|ACD71627.1| Argininosuccinate synthase [Brucella abortus S19]
 gi|225639980|gb|ACN99893.1| argininosuccinate synthase [Brucella melitensis ATCC 23457]
 gi|237789384|gb|EEP63594.1| argininosuccinate synthase [Brucella abortus str. 2308 A]
 gi|255998698|gb|ACU47097.1| argininosuccinate synthase [Brucella microti CCM 4915]
 gi|260096460|gb|EEW80336.1| argininosuccinate synthase [Brucella abortus NCTC 8038]
 gi|260153169|gb|EEW88261.1| argininosuccinate synthase [Brucella melitensis bv. 1 str. 16M]
 gi|260156798|gb|EEW91878.1| argininosuccinate synthase [Brucella suis bv. 4 str. 40]
 gi|260669472|gb|EEX56412.1| argininosuccinate synthase [Brucella abortus bv. 4 str. 292]
 gi|260671310|gb|EEX58131.1| argininosuccinate synthase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260676038|gb|EEX62859.1| argininosuccinate synthase [Brucella abortus bv. 6 str. 870]
 gi|260874482|gb|EEX81551.1| argininosuccinate synthase [Brucella abortus bv. 9 str. C68]
 gi|260916812|gb|EEX83673.1| argininosuccinate synthase [Brucella abortus bv. 3 str. Tulya]
 gi|260919888|gb|EEX86541.1| argininosuccinate synthase [Brucella ceti B1/94]
 gi|260923166|gb|EEX89734.1| argininosuccinate synthase [Brucella ceti M13/05/1]
 gi|261293766|gb|EEX97262.1| argininosuccinate synthase [Brucella ceti M644/93/1]
 gi|261295956|gb|EEX99452.1| argininosuccinate synthase [Brucella pinnipedialis B2/94]
 gi|261300171|gb|EEY03668.1| argininosuccinate synthase [Brucella neotomae 5K33]
 gi|261303734|gb|EEY07231.1| argininosuccinate synthase [Brucella pinnipedialis M163/99/10]
 gi|261741153|gb|EEY29079.1| argininosuccinate synthase [Brucella suis bv. 5 str. 513]
 gi|261745716|gb|EEY33642.1| argininosuccinate synthase [Brucella suis bv. 3 str. 686]
 gi|262551734|gb|EEZ07724.1| argininosuccinate synthase [Brucella ceti M490/95/1]
 gi|262765001|gb|EEZ10922.1| argininosuccinate synthase [Brucella melitensis bv. 3 str. Ether]
 gi|263003346|gb|EEZ15639.1| argininosuccinate synthase [Brucella melitensis bv. 1 str. Rev.1]
 gi|263095329|gb|EEZ18956.1| argininosuccinate synthase [Brucella melitensis bv. 2 str. 63/9]
 gi|264660001|gb|EEZ30262.1| argininosuccinate synthase [Brucella pinnipedialis M292/94/1]
 gi|264661846|gb|EEZ32107.1| argininosuccinate synthase [Brucella sp. 83/13]
 gi|294820068|gb|EFG37067.1| argininosuccinate synthase [Brucella sp. NVSL 07-0026]
 gi|297174646|gb|EFH33993.1| argininosuccinate synthase [Brucella abortus bv. 5 str. B3196]
 gi|306273185|gb|EFM55076.1| argininosuccinate synthase [Brucella sp. BO1]
 gi|306287265|gb|EFM58753.1| argininosuccinate synthase [Brucella sp. BO2]
 gi|306406021|gb|EFM62272.1| argininosuccinate synthase [Brucella sp. NF 2653]
 gi|326408087|gb|ADZ65152.1| Argininosuccinate synthase [Brucella melitensis M28]
 gi|326537803|gb|ADZ86018.1| argininosuccinate synthase [Brucella melitensis M5-90]
          Length = 406

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 7/83 (8%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
          M+   K     +L +SGG D+S  L W        V T + D GQ  ++E        + 
Sbjct: 1  MSKW-KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEP--ARKKAEM 57

Query: 60 IV---ELMPKWKDSLGEDHILPL 79
          +      +   ++    D + P+
Sbjct: 58 LGIKEIFIEDVREEFVRDFVFPM 80


>gi|23500989|ref|NP_697116.1| argininosuccinate synthase [Brucella suis 1330]
 gi|30172863|sp|Q8G376|ASSY_BRUSU RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|23346849|gb|AAN29031.1| argininosuccinate synthase [Brucella suis 1330]
          Length = 406

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 7/83 (8%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
          M+   K     +L +SGG D+S  L W        V T + D GQ  ++E        + 
Sbjct: 1  MSKW-KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEP--ARKKAEM 57

Query: 60 IV---ELMPKWKDSLGEDHILPL 79
          +      +   ++    D + P+
Sbjct: 58 LGIKEIFIEDVREEFVRDFVFPM 80


>gi|330836254|ref|YP_004410895.1| tRNA-specific 2-thiouridylase mnmA [Spirochaeta coccoides DSM
          17374]
 gi|329748157|gb|AEC01513.1| tRNA-specific 2-thiouridylase mnmA [Spirochaeta coccoides DSM
          17374]
          Length = 357

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/79 (11%), Positives = 22/79 (27%), Gaps = 6/79 (7%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG------QRNKVELECRLCVRKKIVEL 63
            L+  SGG DSS        +   V   +                   +   ++++ E+
Sbjct: 2  KILVGMSGGIDSSVAAWLLKQQGYEVIGATMSIWKEGTPYNGPAGNSCYQPETQEELAEI 61

Query: 64 MPKWKDSLGEDHILPLAIL 82
              +       ++    +
Sbjct: 62 QEICRKIGIPHVVVDCQDM 80


>gi|262306095|gb|ACY45640.1| gln amidotransferase [Polyxenus fasciculatus]
          Length = 196

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 2/46 (4%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELE 51
              L+L SGG DS+ C +          V  +  D G   K E +
Sbjct: 43 KSKVLMLVSGGVDSAVCAALLHKALSEDQVIAVHIDNGFMRKDESK 88


>gi|222152184|ref|YP_002561344.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Macrococcus caseolyticus JCSC5402]
 gi|254800105|sp|B9E8Y0|GUAA_MACCJ RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|222121313|dbj|BAH18648.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Macrococcus caseolyticus JCSC5402]
          Length = 513

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 53/185 (28%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS           D++  +  D+G   K E +    V K+  E      
Sbjct: 220 KVICAMSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGEGDM---VMKQFGEGFNMNI 276

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             +         + G                 +      + G   ++L      A     
Sbjct: 277 IRVDAKERFMSKLAG---------------VSDPEQKRKIIGNEFVYLFDEEA-AKLKDA 320

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G   TD          TI++      L  +    +  P+  L K E   L  ++G
Sbjct: 321 DFLAQGTLYTDIIESGTKTAQTIKSHHNVGGLPEDMQFELIEPVNTLFKDEVRALGIELG 380

Query: 189 GQDLV 193
             + +
Sbjct: 381 IPEHL 385


>gi|212634312|ref|YP_002310837.1| GMP synthase [Shewanella piezotolerans WP3]
 gi|226739733|sp|B8CKS4|GUAA_SHEPW RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|212555796|gb|ACJ28250.1| GMP synthase [Shewanella piezotolerans WP3]
          Length = 525

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 50/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS           D++  +  D G     E                +  D
Sbjct: 230 VILGLSGGVDSSVVAMLLHRAIGDKLTCVFVDNGLLRLNE--------------AQQVMD 275

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+   L +  +   +            +        V              A  L   
Sbjct: 276 MFGDHFGLNIIHVDAENRFLDAMAGEADPESKRKIIGHVFVEIFDEESKKCANAKWLAQG 335

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S         I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 336 TIYPDVIESAGSATGKAHV--IKSHHNVGGLPDDMELGLVEPLRELFKDEVRKIGLELGL 393

Query: 190 Q 190
            
Sbjct: 394 P 394


>gi|46200029|ref|YP_005696.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermus thermophilus HB27]
 gi|55980227|ref|YP_143524.1| tRNA-specific 2-thiouridylase MnmA [Thermus thermophilus HB8]
 gi|81405338|sp|Q72GX1|MNMA_THET2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|81600559|sp|Q5SLN5|MNMA_THET8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|46197656|gb|AAS82069.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermus thermophilus HB27]
 gi|55771640|dbj|BAD70081.1| probable tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermus thermophilus HB8]
          Length = 367

 Score = 46.4 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 45/188 (23%), Gaps = 6/188 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIVELMPK 66
              L+  SGG DSS       +    V      +                 +        
Sbjct: 2   KRVLVAMSGGVDSSVAALLLKEAGYEVVGAMMRFWPDLPPPSLEAGKPRAWESCCTPDAA 61

Query: 67  WKDSLGEDHI---LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           ++     D +     L    ++    +             PN        +        A
Sbjct: 62  YEARRVADRLGIPFYLLDYREVFEEEIISPFLQDYAQGRTPNPCARCNTFVKFGALLKQA 121

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWK 182
            RLG+  +  G              D  +     +    +  +  +  P+  L K E   
Sbjct: 122 RRLGLDYVATGHYVRKEGLALLRGLDPHKDQTYFLWGTPKEALPHLLFPVGGLTKPEVRA 181

Query: 183 LAQDIGGQ 190
           LA+  G  
Sbjct: 182 LAEKAGLP 189


>gi|315657217|ref|ZP_07910101.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mobiluncus curtisii subsp. holmesii ATCC 35242]
 gi|315492320|gb|EFU81927.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mobiluncus curtisii subsp. holmesii ATCC 35242]
          Length = 409

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 41/141 (29%), Gaps = 7/141 (4%)

Query: 5   IKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSFDY--GQRNKVELECRLCVRKKI 60
           +++      L+  SGG DS+   +        V           R              +
Sbjct: 1   MRRKNLAKILVGLSGGVDSAVATARLQAAGHEVSGFFMQLESPSRPWSRPVTSAEPVDAL 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +   +  D LG +  +    L +  +  +  + A   +D   PN  V     I   +  
Sbjct: 61  AD-AHRVADFLGVELQVW--DLAERFNRVVMDSFAQAYRDGLTPNPCVHCNRFIKFGYVI 117

Query: 121 TLAYRLGITNIVIGVCETDYS 141
             A R G   +  G     + 
Sbjct: 118 ERARREGFDYVATGHYARLWR 138


>gi|254517654|ref|ZP_05129710.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
 gi|226911403|gb|EEH96604.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
          Length = 517

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 54/189 (28%), Gaps = 21/189 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS            ++  +  D+G   K E +    V          
Sbjct: 219 NGKVLCALSGGVDSSVAAVLLSKAVGSQLTCVFVDHGLLRKNEGDEVEEV---------- 268

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G +    L  +   +     + +    +               F+      A ++
Sbjct: 269 ----FGPNGQYDLNFIRVNAQERFYEKLKGIEEPEQKRKII----GEEFIRVFEEEAKKI 320

Query: 127 G-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLA 184
           G +  +V G    D       +   I++      L        +  PL  L K E  K+ 
Sbjct: 321 GTVDFLVQGTIYPDVIESGLGKSAVIKSHHNVGGLPDYVDFKEIIEPLRLLFKDEVRKVG 380

Query: 185 QDIGGQDLV 193
            ++G  + +
Sbjct: 381 LELGIPEKL 389


>gi|227825121|ref|ZP_03989953.1| bifunctional GMP synthase/glutamine amidotransferase
           [Acidaminococcus sp. D21]
 gi|226905620|gb|EEH91538.1| bifunctional GMP synthase/glutamine amidotransferase
           [Acidaminococcus sp. D21]
          Length = 515

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 55/188 (29%), Gaps = 23/188 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            + L   SGG DSS            ++  +  D+G   K E +    V K+        
Sbjct: 220 KNVLCAMSGGVDSSVAAVLVHKAVGKQLTCVFVDHGLLRKNEGDQVEQVFKR-------- 271

Query: 68  KDSLGEDHILP--LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            D       +      L  +   S  +     I +          R              
Sbjct: 272 -DFDMNLIRVDAKERFLSKLKGVSDPEKKRKIIGEEF-------IRVFEEESKKIGHVDY 323

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           L    I   V E+  +G       TI++      L  +  + +  PL  L K E   + +
Sbjct: 324 LVQGTIYPDVVESGGTG----TSATIKSHHNVGGLPEDMDLDLIEPLRALFKDEVRAVGE 379

Query: 186 DIGGQDLV 193
           ++G    +
Sbjct: 380 ELGIPSEL 387


>gi|213022904|ref|ZP_03337351.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Salmonella enterica subsp. enterica serovar Typhi str.
          404ty]
          Length = 72

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 19/49 (38%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
          + +     ++  SGG DSS        +  +VE L     + +  E  C
Sbjct: 1  MSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYC 49


>gi|124485195|ref|YP_001029811.1| hypothetical protein Mlab_0368 [Methanocorpusculum labreanum Z]
 gi|124362736|gb|ABN06544.1| ExsB family protein [Methanocorpusculum labreanum Z]
          Length = 251

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 28/71 (39%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
          +++I+++   AL+  SGG DS T L+  +     V   +         E+       +++
Sbjct: 3  LSEILREHSPALVALSGGTDSMTLLAAFVKEGGPVSAATIRSEFTPPDEVTRAEHFARRL 62

Query: 61 VELMPKWKDSL 71
                   S+
Sbjct: 63 GVNWTVIDVSV 73


>gi|315505707|ref|YP_004084594.1| asparagine synthase (glutamine-hydrolyzing) [Micromonospora sp. L5]
 gi|315412326|gb|ADU10443.1| asparagine synthase (glutamine-hydrolyzing) [Micromonospora sp. L5]
          Length = 536

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/183 (10%), Positives = 49/183 (26%), Gaps = 6/183 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           ++ SGG DSS  L  A +       ++   G     ++     +   +       +    
Sbjct: 232 VVLSGGLDSSLALLHARELHPDCVAVTI--GVPESPDVAYARRLAADLGVPHEVIELRPR 289

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           +  +  +     +S  +   ++   +    +          + L    +     G     
Sbjct: 290 DIRLADVREAIRVSELTEYGDIINAVVSVPIFRRLRELGVRVVLTGDGSDELFGGYPMYH 349

Query: 133 IGVCETDYSGY-PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
               E     +    R+     ++      M   V    P + L      +LA  +    
Sbjct: 350 RVGPERSRRLFLHKIRNLCRTELQRVDRASMAHGVEARVPFLDLS---VVELAMRLPLDV 406

Query: 192 LVN 194
            + 
Sbjct: 407 KLR 409


>gi|302867888|ref|YP_003836525.1| asparagine synthase [Micromonospora aurantiaca ATCC 27029]
 gi|302570747|gb|ADL46949.1| asparagine synthase (glutamine-hydrolyzing) [Micromonospora
           aurantiaca ATCC 27029]
          Length = 536

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/183 (10%), Positives = 49/183 (26%), Gaps = 6/183 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           ++ SGG DSS  L  A +       ++   G     ++     +   +       +    
Sbjct: 232 VVLSGGLDSSLALLHARELHPDCVAVTI--GVPESPDVAYARRLAADLGVPHEVIELRPR 289

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           +  +  +     +S  +   ++   +    +          + L    +     G     
Sbjct: 290 DIRLADVREAIRVSELTEYGDIINAVVSVPIFRRLRELGVRVVLTGDGSDELFGGYPMYH 349

Query: 133 IGVCETDYSGY-PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
               E     +    R+     ++      M   V    P + L      +LA  +    
Sbjct: 350 RVGPERSRRLFLHKIRNLCRTELQRVDRASMAHGVEARVPFLDLS---VVELAMRLPLDV 406

Query: 192 LVN 194
            + 
Sbjct: 407 KLR 409


>gi|261403374|ref|YP_003247598.1| PP-loop domain protein [Methanocaldococcus vulcanius M7]
 gi|261370367|gb|ACX73116.1| PP-loop domain protein [Methanocaldococcus vulcanius M7]
          Length = 304

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 8/78 (10%), Positives = 22/78 (28%), Gaps = 2/78 (2%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKK 59
             ++ K    L+  SGG+D              +E    + G +   +        + ++
Sbjct: 42  YKMLNKDEKILVAVSGGKDGHVAAWILKKLGYNIELFHINLGIKGFSDESLRAVKALAER 101

Query: 60  IVELMPKWKDSLGEDHIL 77
           +   +            +
Sbjct: 102 LNTPLHVVDLKEITGKTI 119


>gi|11499833|ref|NP_071077.1| argininosuccinate synthase [Archaeoglobus fulgidus DSM 4304]
 gi|5915699|sp|O28032|ASSY_ARCFU RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|2648273|gb|AAB89005.1| argininosuccinate synthetase (argG) [Archaeoglobus fulgidus DSM
          4304]
          Length = 390

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 29/80 (36%), Gaps = 2/80 (2%)

Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            +L +SGG D++ C+    +++  D V T++ D GQ      +     +K   +     
Sbjct: 2  KVVLSYSGGLDTTVCIPLLKEKYGFDEVITVTVDIGQPEADIKQAEERGKKYADKHYTID 61

Query: 68 KDSLGEDHILPLAILGDISH 87
                D +  L        
Sbjct: 62 AKKEFVDSLFMLIKANGNYE 81


>gi|330837271|ref|YP_004411912.1| GMP synthase (glutamine-hydrolyzing) [Spirochaeta coccoides DSM
           17374]
 gi|329749174|gb|AEC02530.1| GMP synthase (glutamine-hydrolyzing) [Spirochaeta coccoides DSM
           17374]
          Length = 520

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 58/185 (31%), Gaps = 17/185 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS           D++  +  + G   K E        + +V+L  K  
Sbjct: 224 KVLCGLSGGVDSSVAAVLIHKAIGDQLVCVFVNNGMLRKNE-------AQNVVDLFGKHF 276

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +   E      A L  +   +  +     I    +   +   R++  + F A        
Sbjct: 277 NMRLEYVDAETAFLDALKGIAEPEAKRKIIGKMFVDVFYDAARSLGDISFLA-------- 328

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
               +     +          TI++      L  +    +  PL  L K E  +L  ++G
Sbjct: 329 -QGTLYPDVIESRSPSGGPSATIKSHHNVGGLPDDLKWELLEPLKELFKDEVRQLGMELG 387

Query: 189 GQDLV 193
             + +
Sbjct: 388 LAEEL 392


>gi|313113561|ref|ZP_07799149.1| GMP synthase protein [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310624076|gb|EFQ07443.1| GMP synthase protein [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 524

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 44/185 (23%), Gaps = 14/185 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS   +        ++  +  D+G   K E E          E+   + 
Sbjct: 225 KVLCALSGGVDSSVLAAMLAKAIGKQLTCVFVDHGLLRKNEKE----------EVCSVFG 274

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   +    +              + +           R              L  
Sbjct: 275 PGNANGFDINFICVDARERYFAKLAGVTEPERKRKIIGEEFIRVFEEQAKKIGKVDFLAQ 334

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I   V E   SG                         +  PL  L K E  +  +++G
Sbjct: 335 GTIYPDVVE---SGLGGESTVIKSHHNVGGLPDTVDFKELVEPLRNLFKDEVRQAGRELG 391

Query: 189 GQDLV 193
             + +
Sbjct: 392 LPEYL 396


>gi|302390349|ref|YP_003826170.1| PP-loop domain protein [Thermosediminibacter oceani DSM 16646]
 gi|302200977|gb|ADL08547.1| PP-loop domain protein [Thermosediminibacter oceani DSM 16646]
          Length = 316

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 4/89 (4%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
            +       L++ SGG+DS       L     V  +  + G  +  E      V ++  E
Sbjct: 42  KMFGPKDRVLVVVSGGKDSMALWHILLKEGYDVTAMYINLGIGDYSE--RSQEVVERFSE 99

Query: 63  --LMPKWKDSLGEDHILPLAILGDISHSS 89
               P    ++ +++ L +  L      S
Sbjct: 100 EHEAPLIVKNIEKEYGLNIPWLAREIRRS 128


>gi|266619710|ref|ZP_06112645.1| putative NH(3)-dependent NAD(+) synthetase [Clostridium hathewayi
          DSM 13479]
 gi|288868734|gb|EFD01033.1| putative NH(3)-dependent NAD(+) synthetase [Clostridium hathewayi
          DSM 13479]
          Length = 94

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 4/69 (5%)

Query: 13 LLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
          L FSGG DSS  L  A         +V  ++FD       +LE    V +++  +     
Sbjct: 26 LAFSGGVDSSLLLKAAAEAVKKTGKKVYAVTFDSRLHPSCDLEIARRVAEELGGIHEVIT 85

Query: 69 DSLGEDHIL 77
              E   +
Sbjct: 86 VDELEQKEI 94


>gi|238917726|ref|YP_002931243.1| GMP synthase (glutamine-hydrolysing) [Eubacterium eligens ATCC
           27750]
 gi|259647681|sp|C4Z3X1|GUAA_EUBE2 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|238873086|gb|ACR72796.1| GMP synthase (glutamine-hydrolysing) [Eubacterium eligens ATCC
           27750]
          Length = 524

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 48/190 (25%), Gaps = 22/190 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   LL  SGG DSS            ++  +  D+G   K E +    V          
Sbjct: 215 SGKVLLALSGGVDSSVAAGLLSRAIGKQLTCVFVDHGLLRKDEGDEVESV---------- 264

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G +    L  +   +       +A   +               F+      A ++
Sbjct: 265 ----FGPEGQFDLNFIRVNAQERYYSKLAGVTEPEAKRKII----GEEFIRVFEEEAKKI 316

Query: 127 GIT---NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           G            +   SG                         +  PL  L K E  K 
Sbjct: 317 GAVDFLAQGTIYPDVVESGLGGESAVIKSHHNVGGLPDFVDFKEIIEPLRNLFKDEVRKA 376

Query: 184 AQDIGGQDLV 193
             ++G  + +
Sbjct: 377 GLELGIPEHL 386


>gi|126653986|ref|ZP_01725821.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Bacillus sp. B14905]
 gi|126589503|gb|EAZ83646.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Bacillus sp. B14905]
          Length = 137

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/129 (12%), Positives = 30/129 (23%), Gaps = 5/129 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS        +   V  +             C     +   +++     
Sbjct: 11  RVVVGMSGGVDSSVAAYLLKQQGYEVIGIFMKNWDDTDENGVC--TATEDYDDVIKVCNQ 68

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                + +            +      + +    PN  V     I        A  LG  
Sbjct: 69  IGIPYYAVN---FEKQYWDKVFTYFLEEYKAGRTPNPDVMCNKEIKFKAFLEHAMSLGAD 125

Query: 130 NIVIGVCET 138
            +  G    
Sbjct: 126 YLATGHYAR 134


>gi|320529147|ref|ZP_08030239.1| GMP synthase protein [Selenomonas artemidis F0399]
 gi|320138777|gb|EFW30667.1| GMP synthase protein [Selenomonas artemidis F0399]
          Length = 519

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 44/185 (23%), Gaps = 17/185 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            AL   SGG DSS             +  +  D G            +RK   + +    
Sbjct: 223 RALCALSGGVDSSVAAVLLSKAIGKNLTCVFVDQG-----------LLRKNEGDEVEAVF 271

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            S G   +  + I          K V    Q        + G   I +   A        
Sbjct: 272 GSAGTYDVNFIRINAQERFYEKLKGVTEPEQKRK-----IIGAEFIRVFEEAAHEIGTVD 326

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +                                +  PL  L K E     +++G
Sbjct: 327 FLVQGTIYPDVIESGLGKSAVIKSHHNVGGLPDHVDFKEIVEPLRLLFKDEVRAAGRELG 386

Query: 189 GQDLV 193
             D +
Sbjct: 387 IPDYL 391


>gi|300173029|ref|YP_003772195.1| argininosuccinate synthase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887408|emb|CBL91376.1| argininosuccinate synthase [Leuconostoc gasicomitatum LMG 18811]
          Length = 408

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 26/68 (38%), Gaps = 1/68 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L +SGG D+S  + W   +   +  +  + GQ +  +++       ++      
Sbjct: 1  MTEKLVLAYSGGLDTSVAIPWLKGKGYEIIAVVLNVGQ-HGKDMDMIQAKALQVGASQSI 59

Query: 67 WKDSLGED 74
            D+  E 
Sbjct: 60 VIDAQAEF 67


>gi|294664076|ref|ZP_06729476.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
 gi|292606150|gb|EFF49401.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
          Length = 521

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 49/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D G     E +              +   
Sbjct: 226 VILGLSGGVDSSVVAALLHKAIGDKLTCVFVDTGLLRWQEGD--------------QVMA 271

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E   + +  +                +        +              A  L   
Sbjct: 272 MFAEHMGVKVIRINAADRYFAKLEGVSDPEAKRKIIGNLFVEIFDEESNKLANAKWLAQG 331

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S     +   I++      L     + +  PL  L K E  +L  ++G 
Sbjct: 332 TIYPDVIESAGS--KTGKAHVIKSHHNVGGLPEHMKLGLVEPLRELFKDEVRRLGVELGL 389

Query: 190 Q 190
            
Sbjct: 390 P 390


>gi|198467713|ref|XP_002134614.1| GA22395 [Drosophila pseudoobscura pseudoobscura]
 gi|198149375|gb|EDY73241.1| GA22395 [Drosophila pseudoobscura pseudoobscura]
          Length = 387

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 62/213 (29%), Gaps = 12/213 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC--------RLCVRK 58
              + ++  SGG DS+       +R  RV  +       +     C             +
Sbjct: 1   MIRNIVVGMSGGVDSAVSAHLLRERGHRVMGVFMRNWDEHDEAGRCSGEQDLKDAEWACQ 60

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN-TFVPGRNIIFLV 117
           ++   + +    + E      +   D     LT N  +    +   +       + +   
Sbjct: 61  RLGIELRQVN-YVKEYWTAVFSAFLDDYQQGLTPNPDILCNRHIKFDLFHRHALDKLGYD 119

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM-WLK 176
             AT  Y        +               DT +     +       +      +  L 
Sbjct: 120 AVATGHYARNSLGNFLEHRADGGEARLLIPADTFKDQTFFLAGIPRQALQRTMFPLGDLA 179

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRD 209
           K E   LA+ IG Q  +    E +  C++GKRD
Sbjct: 180 KNEVKLLARRIGLQ-RLAHKRESTGICFVGKRD 211


>gi|13473685|ref|NP_105253.1| argininosuccinate synthase [Mesorhizobium loti MAFF303099]
 gi|24211524|sp|Q98E81|ASSY_RHILO RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|14024436|dbj|BAB51039.1| argininosuccinate synthase [Mesorhizobium loti MAFF303099]
          Length = 407

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 47/159 (29%), Gaps = 8/159 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
           M+   K     +L +SGG D+S  L W        V T + D GQ  ++E        +K
Sbjct: 1   MSK-TKDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGGELEP------ARK 53

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
             E+M      + +     +A        + T      +   ++    +    +      
Sbjct: 54  KAEMMGIKDIRIVDVREEFVADFVFPMFRANTVYEGTYLLGTSIARPLISKHLVDIARET 113

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI 158
              A   G T         + S Y       + A     
Sbjct: 114 GADAIAHGATGKGNDQVRFELSAYALNPDIKVIAPWRDW 152


>gi|314936819|ref|ZP_07844166.1| argininosuccinate synthase [Staphylococcus hominis subsp. hominis
          C80]
 gi|313655438|gb|EFS19183.1| argininosuccinate synthase [Staphylococcus hominis subsp. hominis
          C80]
          Length = 400

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
               +L +SGG D+S  + W +D+   V  +  D G
Sbjct: 1  MKDKIVLAYSGGLDTSVAVKWLIDKGYDVVAVCLDVG 37


>gi|312872357|ref|ZP_07732427.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus iners LEAF 2062A-h1]
 gi|311092180|gb|EFQ50554.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus iners LEAF 2062A-h1]
          Length = 375

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 48/186 (25%), Gaps = 13/186 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS       ++   V  +   ++   +   +       + +  +  K  
Sbjct: 8   RVVVGMSGGVDSSVSALLLKEQGYDVVGVFMKNWDDTDDSGVCTATEDFEDVKRVADKIG 67

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                              + + +    + +    PN  +     I        A +L  
Sbjct: 68  IPYYS------INFEKEYWNKVFEYFLSEYKRGRTPNPDIMCNKEIKFKSFLDFAMKLDA 121

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLKKYETWK 182
             I +G      +      H               S V          PL  L K +   
Sbjct: 122 DYIAMGHYAKTVTDKNGVVHMMRPKDGNKDQTYFLSQVTQEQLKKAIFPLADLSKPQVRM 181

Query: 183 LAQDIG 188
           +A+  G
Sbjct: 182 IAEQAG 187


>gi|259500706|ref|ZP_05743608.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus iners DSM 13335]
 gi|302191396|ref|ZP_07267650.1| tRNA-specific 2-thiouridylase MnmA [Lactobacillus iners AB-1]
 gi|309803957|ref|ZP_07698040.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus iners LactinV 11V1-d]
 gi|309809301|ref|ZP_07703170.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus iners SPIN 2503V10-D]
 gi|312873992|ref|ZP_07734028.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus iners LEAF 2052A-d]
 gi|315653459|ref|ZP_07906380.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus iners ATCC 55195]
 gi|325911482|ref|ZP_08173893.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus iners UPII 143-D]
 gi|329921278|ref|ZP_08277716.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus iners SPIN 1401G]
 gi|259168090|gb|EEW52585.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus iners DSM 13335]
 gi|308163959|gb|EFO66223.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus iners LactinV 11V1-d]
 gi|308170414|gb|EFO72438.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus iners SPIN 2503V10-D]
 gi|311090541|gb|EFQ48949.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus iners LEAF 2052A-d]
 gi|315489150|gb|EFU78791.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus iners ATCC 55195]
 gi|325476682|gb|EGC79837.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus iners UPII 143-D]
 gi|328934570|gb|EGG31074.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus iners SPIN 1401G]
          Length = 375

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 48/186 (25%), Gaps = 13/186 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS       ++   V  +   ++   +   +       + +  +  K  
Sbjct: 8   RVVVGMSGGVDSSVSALLLKEQGYDVVGVFMKNWDDTDDSGVCTATEDFEDVKRVADKIG 67

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                              + + +    + +    PN  +     I        A +L  
Sbjct: 68  IPYYS------INFEKEYWNKVFEYFLSEYKRGRTPNPDIMCNKEIKFKSFLDFAMKLDA 121

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLKKYETWK 182
             I +G      +      H               S V          PL  L K +   
Sbjct: 122 DYIAMGHYAKTVTDENGVVHMMRPKDGNKDQTYFLSQVTQEQLKKAIFPLADLSKPQVRM 181

Query: 183 LAQDIG 188
           +A+  G
Sbjct: 182 IAEQAG 187


>gi|255017475|ref|ZP_05289601.1| thiamine biosynthesis protein ThiI [Listeria monocytogenes FSL
           F2-515]
          Length = 177

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 12/27 (44%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDR 34
           +  A+L+ SGG DS      A  R   
Sbjct: 151 SGRAMLMLSGGIDSPVAGYLAQKRGVE 177


>gi|228474239|ref|ZP_04058974.1| argininosuccinate synthase [Staphylococcus hominis SK119]
 gi|228271598|gb|EEK12945.1| argininosuccinate synthase [Staphylococcus hominis SK119]
          Length = 400

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
               +L +SGG D+S  + W +D+   V  +  D G
Sbjct: 1  MKDKIVLAYSGGLDTSVAVKWLIDKGYDVVAVCLDVG 37


>gi|222150837|ref|YP_002559990.1| argininosuccinate synthase [Macrococcus caseolyticus JCSC5402]
 gi|222119959|dbj|BAH17294.1| argininosuccinate synthase [Macrococcus caseolyticus JCSC5402]
          Length = 402

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          + +    +L +SGG D+S  + W +++   V     D G
Sbjct: 1  MHEKQKVVLAYSGGLDTSVAIQWLIEKGYEVIACCLDVG 39


>gi|118473593|ref|YP_886701.1| tRNA-specific 2-thiouridylase MnmA [Mycobacterium smegmatis str.
           MC2 155]
 gi|166235065|sp|A0QUW3|MNMA_MYCS2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|118174880|gb|ABK75776.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycobacterium smegmatis str. MC2 155]
          Length = 356

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 42/181 (23%), Gaps = 4/181 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL-MPKWK 68
             L+  SGG DSS   +  +D    V  +                    K       +  
Sbjct: 2   RVLVAMSGGVDSSVAAARMVDAGHDVVGVHLALSSAPGTLRTGSRGCCSKEDASDARRVA 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D LG    +      D     +  +          PN  V     I     A  A  LG 
Sbjct: 62  DILGIPFYVW--DFADRFKDDVIDDFVESYARGETPNPCVRCNERIKFSALAARALALGF 119

Query: 129 TNIVIGVCETDYSGY-PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +  G       G                  L  E       P+    K +    A + 
Sbjct: 120 DAVATGHYARLSDGRLRRAVDADKDQSYVLGVLTAEQLRHALFPIGDTPKPQIRAEAAER 179

Query: 188 G 188
           G
Sbjct: 180 G 180


>gi|261867824|ref|YP_003255746.1| argininosuccinate synthase [Aggregatibacter actinomycetemcomitans
          D11S-1]
 gi|261413156|gb|ACX82527.1| argininosuccinate synthase [Aggregatibacter actinomycetemcomitans
          D11S-1]
          Length = 445

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 25/65 (38%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          + K     + FSGG D+S  L W   +       + + GQ ++ +        K+    M
Sbjct: 9  LPKGEKVGIAFSGGLDTSAALLWMRQKGAIPCAYTANLGQPDEDDYNAIPRKAKEYGAEM 68

Query: 65 PKWKD 69
           +  D
Sbjct: 69 ARLID 73


>gi|260590123|ref|ZP_05856036.1| argininosuccinate synthase [Blautia hansenii DSM 20583]
 gi|260539635|gb|EEX20204.1| argininosuccinate synthase [Blautia hansenii DSM 20583]
          Length = 423

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 62/215 (28%), Gaps = 29/215 (13%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNK---VELECRLCVRKKIVE 62
                +L +SGG D++  + W  + F   V     + GQ ++   +E    L    K+  
Sbjct: 16  MKEKVILAYSGGLDTTALIPWLKENFDYEVICCCINCGQGSELDGLEERAALSGASKL-- 73

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
            +    D   +D+I+P    G +              +N         R  I        
Sbjct: 74  YIEDIVDEFCDDYIVPCVQAGAVY-------------ENKYLLGTSMARPPIAKKLVEI- 119

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A + G   I  G                  A +  I                  + +  +
Sbjct: 120 ARKEGAVAICHGATGKGNDQIRFELGIKALAPDLKIIAPWRMTD----VWTMQSREDEME 175

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
             +  G    ++L    S++ Y   R+  +    G
Sbjct: 176 YCKAHG----IDLPFNMSNS-YSRDRNLWHISHEG 205


>gi|251792204|ref|YP_003006924.1| argininosuccinate synthase [Aggregatibacter aphrophilus NJ8700]
 gi|247533591|gb|ACS96837.1| argininosuccinate synthase [Aggregatibacter aphrophilus NJ8700]
          Length = 445

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 25/65 (38%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          + K     + FSGG D+S  L W           + + GQ ++ + +      K+    M
Sbjct: 9  LPKGEKVGIAFSGGLDTSAALLWMRQHGAIPCAYTANLGQPDEDDYDAIPRKAKEYGAEM 68

Query: 65 PKWKD 69
           +  D
Sbjct: 69 ARLID 73


>gi|117617562|ref|YP_855748.1| tRNA(Ile)-lysidine synthetase [Aeromonas hydrophila subsp.
          hydrophila ATCC 7966]
 gi|117558969|gb|ABK35917.1| tRNA(Ile)-lysidine synthetase [Aeromonas hydrophila subsp.
          hydrophila ATCC 7966]
          Length = 446

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 6/56 (10%)

Query: 12 LLLFSGGQDSSTCLSW----ALDRFDRVETLSFDYGQRNKVELECRLC--VRKKIV 61
          L+ FSGG DS+  L      A ++   +  L   +G     +     C  V +++ 
Sbjct: 23 LVAFSGGLDSTVLLVLAAQFAREQGLVLRALHVHHGLSPNADEWVAHCETVCQQLA 78


>gi|70726990|ref|YP_253904.1| argininosuccinate synthase [Staphylococcus haemolyticus JCSC1435]
 gi|119361329|sp|Q4L4X7|ASSY_STAHJ RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|68447714|dbj|BAE05298.1| argininosuccinate synthase [Staphylococcus haemolyticus JCSC1435]
          Length = 400

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
               +L +SGG D+S  + W +D+   V  +  D G
Sbjct: 1  MKEKIVLAYSGGLDTSVAVKWLIDKGYDVVAVCLDVG 37


>gi|33861847|ref|NP_893408.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prochlorococcus marinus subsp. pastoris str. CCMP1986]
 gi|81572901|sp|Q7TTQ1|MNMA_PROMP RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|33640215|emb|CAE19750.1| tRNA methyl transferase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 390

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 56/202 (27%), Gaps = 21/202 (10%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           N+  KK    ++  SGG DSS   +  ++   +VE L+        +      C  + +V
Sbjct: 17  NNKSKKQQKIIVGLSGGVDSSLSAALLIEDGWKVEGLTL------WLMKGEGSCCSEGLV 70

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +     +D     +IL   ++ +      T             +          ++    
Sbjct: 71  DAAGLCEDLGINHNILDSRVIFEREVVKKTTEGYESGFTPLPCSMCNKNVKFEEMLNFVI 130

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTI---------------RAIETAINLGMESHV 166
                              S      ++                        +L  E   
Sbjct: 131 KQKEFTYIATGHYARVQKVSCENIKNYENFQFKDFLLLRGADRNKDQSYFLYSLSQEVLS 190

Query: 167 TVHTPLMWLKKYETWKLAQDIG 188
            +  PL  LKK ET K A  +G
Sbjct: 191 RLILPLGNLKKEETRKEALRLG 212


>gi|20807079|ref|NP_622250.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Thermoanaerobacter tengcongensis MB4]
 gi|24211749|sp|Q8RC63|GUAA_THETN RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|20515569|gb|AAM23854.1| GMP synthase - PP-ATPase domain protein [Thermoanaerobacter
           tengcongensis MB4]
          Length = 512

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 53/185 (28%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+           D++  +  D G     E +  +   +K         
Sbjct: 219 KAVCALSGGVDSAVAAVLVDRAIHDQLVCIFVDTGLLRTNEGDMVIETFRK--------- 269

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                D  +      D   S L      + +   + N F+       +          G 
Sbjct: 270 ---NYDMNIIRVDAKDRFLSRLKGVTDPEEKRKIIGNVFIEVFKEEAMKIGDVKFLVQGT 326

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
               +       S         I++      L  +    +  PL  L K E  ++ +++G
Sbjct: 327 LYPDVIESGHGISST-------IKSHHNVGGLPEDIGFELIEPLRMLFKDEVRQVGKELG 379

Query: 189 GQDLV 193
             D +
Sbjct: 380 IPDEI 384


>gi|118580257|ref|YP_901507.1| tRNA-specific 2-thiouridylase MnmA [Pelobacter propionicus DSM
           2379]
 gi|205816920|sp|A1AQ29|MNMA_PELPD RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|118502967|gb|ABK99449.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pelobacter propionicus DSM 2379]
          Length = 355

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/152 (11%), Positives = 33/152 (21%), Gaps = 17/152 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG----QRNKVELECRLCVRKKIVELMP 65
              +  SGG DSS   +   ++   +  ++  +     Q           V   +     
Sbjct: 2   KIAVAMSGGVDSSVAAALLKEQGHEIIGITMQFFAPSCQGAGTPAHDAAVVAAHLGITHH 61

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                     ++    +                +    PN  V     +        A  
Sbjct: 62  LLDLEHDFRQLIINDFISQ-------------YRSGQTPNPCVRCNRFVKFGLLLDAARE 108

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETA 157
            G   +  G            RH  + A    
Sbjct: 109 RGADLLATGHYARTSIDPDGTRHLRVAANLRK 140


>gi|326386574|ref|ZP_08208196.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Novosphingobium nitrogenifigens DSM 19370]
 gi|326208889|gb|EGD59684.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Novosphingobium nitrogenifigens DSM 19370]
          Length = 519

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 58/184 (31%), Gaps = 17/184 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+       +   D++  +  D+G     E        +++V L     
Sbjct: 223 RVICGLSGGVDSAVAAVLIHEAIGDQLTCVFVDHGLMRLGE-------AEQVVGLFRNHY 275

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +            L  +   +  +     I    +       R +         A  L  
Sbjct: 276 NIPLVHRDASTLFLKGLEGVTDPEAKRKFIGKTFIDVFEEEARQV-------GGADFLAQ 328

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+    +      TI++      L    ++ +  PL  L K E  +L +++G
Sbjct: 329 GTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRELGRELG 386

Query: 189 GQDL 192
             D+
Sbjct: 387 LPDI 390


>gi|325833497|ref|ZP_08165946.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Eggerthella sp. HGA1]
 gi|325485421|gb|EGC87890.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Eggerthella sp. HGA1]
          Length = 352

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 55/193 (28%), Gaps = 22/193 (11%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS--FDYGQRNKVELECRLCVRKKIVE 62
           +  +    L  SGG DS+   +  +     V  ++  F      +        V  ++  
Sbjct: 1   MNASGRIALGMSGGVDSAVSAALLMRAGYEVVGVTCRFRDNAATERAAADAAAVCSQLG- 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +  +  + +GE     +        + LT +  +           V              
Sbjct: 60  IRHETPECVGEFERCVVEPFVSSYAAGLTPSPCVGCNARCKMPALVRV------------ 107

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-------TVHTPLMWL 175
           A  LG   I  G            R    RA++   +      +        +  PL  +
Sbjct: 108 ADELGCDRIATGHYARIARLSDSGRFVVKRALDARKDQSYMLSLLSQEQLARLVLPLGAM 167

Query: 176 KKYETWKLAQDIG 188
            K E   +A D+G
Sbjct: 168 TKAEVRVIAADLG 180


>gi|319404602|emb|CBI78208.1| GMP synthase [Bartonella rochalimae ATCC BAA-1498]
          Length = 518

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 52/182 (28%), Gaps = 18/182 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DSS       +   D++  +  D+G   K E+E  L + +           
Sbjct: 224 VICGLSGGVDSSVAAILLHEAVGDQLTCVFVDHGLMRKNEVEEVLTLFR----------- 272

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                + + L  +                +        +              A  L   
Sbjct: 273 ---GHYNIKLIHVNAADMFINALEGETDPEKKRKIIGRLFIEVFEEETKKIRGAEFLAQG 329

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   V E+  +         I++      L     + +  PL  L K +   L +++G 
Sbjct: 330 TLYPDVIESVSAIGEAVT---IKSHHNVGGLPERMKMQLVEPLRELFKDDVRSLGRELGL 386

Query: 190 QD 191
            +
Sbjct: 387 PE 388


>gi|256848294|ref|ZP_05553737.1| GMP synthase domain-containing protein [Lactobacillus coleohominis
           101-4-CHN]
 gi|256714892|gb|EEU29870.1| GMP synthase domain-containing protein [Lactobacillus coleohominis
           101-4-CHN]
          Length = 517

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS           D++  +  D+G   K E +      + +  L    
Sbjct: 223 KKVILGLSGGVDSSVTAVLLHKAIGDQLTCIFVDHGLLRKNEAD------QVMNALSRDL 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             ++ +       +      +   K   +  ++                 F         
Sbjct: 277 GVNIIKVDASDRFLGKLKGVTDPEKKRKIIGKEFVEV-------------FNEEAKKMDD 323

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +  G   TD          TI++      L  +    +  PL  L K ET +L + +
Sbjct: 324 AEFLAQGTLYTDVIESGTDTAQTIKSHHNVGGLPKKLGFKLIEPLRSLFKDETRELGEKL 383

Query: 188 GGQDLV 193
           G    +
Sbjct: 384 GIPHEL 389


>gi|254993805|ref|ZP_05275995.1| hypothetical protein LmonocytoFSL_13100 [Listeria monocytogenes FSL
           J2-064]
          Length = 184

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/103 (12%), Positives = 29/103 (28%), Gaps = 5/103 (4%)

Query: 138 TDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLIL 197
                     H     +   +   +   + +     +  K E  +              +
Sbjct: 12  EFGRYTTKTTHPKTIFLYNKLLDTLGYDIRIVNKFEYETKGEIVENM-----NLEFKSQI 66

Query: 198 EESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQD 240
           + + TC   +  K Y     C +C  C LR+     +  ++ D
Sbjct: 67  KNTFTCGKSRVGKEYNHTGQCGACIPCILRKISLAAYDNEHFD 109


>gi|259506693|ref|ZP_05749595.1| GMP synthase [Corynebacterium efficiens YS-314]
 gi|259165711|gb|EEW50265.1| GMP synthase [Corynebacterium efficiens YS-314]
          Length = 497

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 51/193 (26%), Gaps = 12/193 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
            + +     A+   SGG DS+   +       DR+  +  D+G     E   R  V K  
Sbjct: 187 REQVGPEGRAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGE---REQVEKDF 243

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           V              ++ +                   +              +  V   
Sbjct: 244 VAATGA--------KLVTVDERKAFLDKLAGVTEPEAKRKAIGAEFIRSFERAVAGVLED 295

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           +         +   +               I++      L  +    +  PL  L K E 
Sbjct: 296 SPEGSTVDFLVQGTLYPDVVESGGGAGTANIKSHHNVGGLPDDVEFELVEPLRLLFKDEV 355

Query: 181 WKLAQDIGGQDLV 193
             + +++G  +++
Sbjct: 356 RAVGRELGLPEVI 368


>gi|256026660|ref|ZP_05440494.1| GMP synthase [Fusobacterium sp. D11]
 gi|289764658|ref|ZP_06524036.1| bifunctional GMP synthase/glutamine amidotransferase [Fusobacterium
           sp. D11]
 gi|289716213|gb|EFD80225.1| bifunctional GMP synthase/glutamine amidotransferase [Fusobacterium
           sp. D11]
          Length = 408

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 55/187 (29%), Gaps = 18/187 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +        ++  +  D G   K E        K+++E+  K
Sbjct: 111 NKKVILGLSGGVDSSVAAALINKAIGKQLTCIFVDTGLLRKDE-------AKQVMEVYAK 163

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D   +        L  ++           I D       +    +      A      
Sbjct: 164 NFDMNIKCINAEERFLTKLAG----------ITDPETKRKIIGKEFVEVFNEEAKKIEGA 213

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                     +   S        TI++      L  +    +  PL  L K E  K+ ++
Sbjct: 214 EFLAQGTIYPDVIESVSVKGPSVTIKSHHNVGGLPKDLKFELLEPLRELFKDEVRKVGRE 273

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 274 LGIPDYM 280


>gi|145632651|ref|ZP_01788385.1| DNA mismatch repair protein [Haemophilus influenzae 3655]
 gi|144986846|gb|EDJ93398.1| DNA mismatch repair protein [Haemophilus influenzae 3655]
          Length = 430

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 8/84 (9%)

Query: 1  MNDIIKKAPSA-----LLLFSGGQDSSTCL---SWALDRFDRVETLSFDYGQRNKVELEC 52
          ++DI K+   A     L+  SGG DS+  L   +    +   +  LS      +      
Sbjct: 4  LSDIEKQLKKATTQAFLIALSGGLDSTVLLSLFAKLRQKRPHLPPLSVRAIHIHHGLSPN 63

Query: 53 RLCVRKKIVELMPKWKDSLGEDHI 76
               K   +L  +++  L  + +
Sbjct: 64 ADSWAKHCQDLCDQFQIPLIIERV 87


>gi|108806863|ref|YP_650779.1| argininosuccinate synthase [Yersinia pestis Antiqua]
 gi|108778776|gb|ABG12834.1| argininosuccinate synthase [Yersinia pestis Antiqua]
          Length = 121

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 3/72 (4%)

Query: 1  MNDIIKK---APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I+K         + FSGG D+S  L W   +       + + GQ ++ + E      
Sbjct: 1  MTTILKHLPINQRVGIAFSGGLDTSAALLWMQKKGAIPYAYTANLGQPDEEDYEAIPRKA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 MEYGAEKARLID 72


>gi|84490100|ref|YP_448332.1| GMP synthase subunit B [Methanosphaera stadtmanae DSM 3091]
 gi|84373419|gb|ABC57689.1| GMP synthase [glutamine hydrolyzing], subunit B [Methanosphaera
           stadtmanae DSM 3091]
          Length = 308

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 51/188 (27%), Gaps = 28/188 (14%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K    ++  SGG DSS     A     +++E +  D+G                   L+ 
Sbjct: 20  KDEKVIIALSGGVDSSVASILASKAIGNQLEAVFVDHG-------------------LLR 60

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           K +    ED          ++           + D       +      F+      A +
Sbjct: 61  KNEAKEVEDTFKDRLNFKLVNAQDEFIEALDGVTDPEKKREII---GHKFIEVFEREAKK 117

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G   ++ G                       + L     + +  PL  L K E  ++  
Sbjct: 118 SGAKYLLQGTIA-----PDWIESKGNIKSHHNLTLPEGLVLKIIEPLRELYKDEVREVGT 172

Query: 186 DIGGQDLV 193
            +   D +
Sbjct: 173 ALELPDAI 180


>gi|25027171|ref|NP_737225.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Corynebacterium efficiens YS-314]
 gi|44887965|sp|Q8FRZ3|GUAA_COREF RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|23492452|dbj|BAC17425.1| GMP synthase [Corynebacterium efficiens YS-314]
          Length = 523

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 51/193 (26%), Gaps = 12/193 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
            + +     A+   SGG DS+   +       DR+  +  D+G     E   R  V K  
Sbjct: 213 REQVGPEGRAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGE---REQVEKDF 269

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           V              ++ +                   +              +  V   
Sbjct: 270 VAATGA--------KLVTVDERKAFLDKLAGVTEPEAKRKAIGAEFIRSFERAVAGVLED 321

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           +         +   +               I++      L  +    +  PL  L K E 
Sbjct: 322 SPEGSTVDFLVQGTLYPDVVESGGGAGTANIKSHHNVGGLPDDVEFELVEPLRLLFKDEV 381

Query: 181 WKLAQDIGGQDLV 193
             + +++G  +++
Sbjct: 382 RAVGRELGLPEVI 394


>gi|167038114|ref|YP_001665692.1| GMP synthase [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|167039174|ref|YP_001662159.1| GMP synthase [Thermoanaerobacter sp. X514]
 gi|256750854|ref|ZP_05491738.1| GMP synthase, large subunit [Thermoanaerobacter ethanolicus CCSD1]
 gi|300913231|ref|ZP_07130548.1| GMP synthase, large subunit [Thermoanaerobacter sp. X561]
 gi|307723755|ref|YP_003903506.1| GMP synthase large subunit [Thermoanaerobacter sp. X513]
 gi|320116520|ref|YP_004186679.1| GMP synthase large subunit [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|166853414|gb|ABY91823.1| GMP synthase, large subunit [Thermoanaerobacter sp. X514]
 gi|166856948|gb|ABY95356.1| GMP synthase, large subunit [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|256750189|gb|EEU63209.1| GMP synthase, large subunit [Thermoanaerobacter ethanolicus CCSD1]
 gi|300889916|gb|EFK85061.1| GMP synthase, large subunit [Thermoanaerobacter sp. X561]
 gi|307580816|gb|ADN54215.1| GMP synthase, large subunit [Thermoanaerobacter sp. X513]
 gi|319929611|gb|ADV80296.1| GMP synthase, large subunit [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 512

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 54/185 (29%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DSS           D++  +  D G   K E +  +   +K         
Sbjct: 219 KAVCALSGGVDSSVAAVLVDRAIHDQLVCIFVDTGLLRKNEGDMVIETFRK--------- 269

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                D  +      D   S L      + +   + N F+       L          G 
Sbjct: 270 ---NYDMNIIRVDAKDRFLSRLKGVTDPEEKRKIIGNVFIEVFKEEALKIGDVKFLVQGT 326

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
               +       S         I++      L  +    +  PL  L K E  ++ +++G
Sbjct: 327 LYPDVIESGNGVSST-------IKSHHNVGGLPEDIGFELIEPLRMLFKDEVRQVGKELG 379

Query: 189 GQDLV 193
             + +
Sbjct: 380 IPEEI 384


>gi|296269998|ref|YP_003652630.1| argininosuccinate synthase [Thermobispora bispora DSM 43833]
 gi|296092785|gb|ADG88737.1| argininosuccinate synthase [Thermobispora bispora DSM 43833]
          Length = 399

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           A   +L +SGG D+S  +   A      V  ++ D GQ  +     R     
Sbjct: 1  MADRVVLAYSGGLDTSVAIPYLAEKMGAEVIAVAVDVGQGGEDMEVIRKRALD 53


>gi|194744309|ref|XP_001954637.1| GF16645 [Drosophila ananassae]
 gi|190627674|gb|EDV43198.1| GF16645 [Drosophila ananassae]
          Length = 443

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 2/61 (3%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           + +L +SGG D+S  L W LD+   V  +  D GQ+   +         KI        
Sbjct: 28 ETVILAYSGGLDTSCILKWLLDQKYEVICVLADVGQK--EDFVAAEKKALKIGAKKVIVS 85

Query: 69 D 69
          D
Sbjct: 86 D 86


>gi|152993271|ref|YP_001358992.1| argininosuccinate synthase [Sulfurovum sp. NBC37-1]
 gi|187470632|sp|A6QAX6|ASSY_SULNB RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|151425132|dbj|BAF72635.1| argininosuccinate synthase [Sulfurovum sp. NBC37-1]
          Length = 447

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 47/160 (29%), Gaps = 7/160 (4%)

Query: 5   IKKAP--SALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIV 61
           + K     A+L +SGG D+S  L W  D +   V T + D GQ  +VE   +    K + 
Sbjct: 1   MAKRKISKAVLAYSGGLDTSIILKWLQDEYECEVVTFTADLGQGEEVEPARQ----KALD 56

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
             +      + +     +         +        +   ++    +  + I        
Sbjct: 57  MGIKPENIFILDLREEFVRDFVFPMFRANAIYEGEYLLGTSIARPLISKKQIEIAHQTGA 116

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
            A   G T         +           + A     +L 
Sbjct: 117 DAVSHGATGKGNDQVRFELGYLALDPDIAVIAPWREWDLN 156


>gi|332827699|gb|EGK00438.1| GMP synthase [Dysgonomonas gadei ATCC BAA-286]
          Length = 506

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 55/187 (29%), Gaps = 21/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D+G   K E E  L   + +       
Sbjct: 213 DKVILALSGGVDSSVTAVLLNKAIGKNLTCVFVDHGLLRKNEFENVLRDYEHLG------ 266

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      L ++G  +     K +A              G   +   F         
Sbjct: 267 -----------LNVIGIDAKERFYKELAGVTDPEQKRKIIGKGFIDV---FDEEAHKLKD 312

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           I++      L  + ++ +  PL  L K E  ++  ++
Sbjct: 313 IKWLGQGTIYPDIIESLSITGHVIKSHHNVGGLPEKMNLKLVEPLRLLFKDEVRRVGLEL 372

Query: 188 GGQDLVN 194
           G ++ + 
Sbjct: 373 GMKENLI 379


>gi|310826721|ref|YP_003959078.1| GMP synthase [Eubacterium limosum KIST612]
 gi|308738455|gb|ADO36115.1| GMP synthase [Eubacterium limosum KIST612]
          Length = 512

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 51/181 (28%), Gaps = 20/181 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS   +       D++  +  D+G   K E +    + K         
Sbjct: 218 KKVLCALSGGVDSSVASTLVHRAIGDQLTCIFVDHGLLRKDEGDQVEEIFKN-------- 269

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      +  +           +A     ++              VF    +    
Sbjct: 270 --------RFKMNFIRVNCEDRFLGKLAGI---DDPERKRKIIGEEFIRVFEEESSKLKN 318

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  ++ G    D           I++      L  +    +  PL  L K E  +L +++
Sbjct: 319 IDYLLQGTIYPDVIESGTKNAAVIKSHHNVGGLPEDVDFELIEPLRNLFKDEVRELGEEL 378

Query: 188 G 188
           G
Sbjct: 379 G 379


>gi|322435517|ref|YP_004217729.1| argininosuccinate synthase [Acidobacterium sp. MP5ACTX9]
 gi|321163244|gb|ADW68949.1| argininosuccinate synthase [Acidobacterium sp. MP5ACTX9]
          Length = 446

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + E       +      +  D
Sbjct: 16 IAFSGGLDTSAALHWMKQKGALPYAYTANLGQPDEADYEEIPRKALEYGAEKARLID 72


>gi|257454669|ref|ZP_05619925.1| argininosuccinate synthase [Enhydrobacter aerosaccus SK60]
 gi|257447979|gb|EEV22966.1| argininosuccinate synthase [Enhydrobacter aerosaccus SK60]
          Length = 454

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +   +  +  D
Sbjct: 27 IAFSGGLDTSAALLWMKQKGALPYAYTANLGQPDEDDYNAIPKKADQYGAVKARLID 83


>gi|90020884|ref|YP_526711.1| GntR family transcriptional regulator [Saccharophagus degradans
          2-40]
 gi|89950484|gb|ABD80499.1| transcriptional regulator, GntR family [Saccharophagus degradans
          2-40]
          Length = 429

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 18/53 (33%), Gaps = 8/53 (15%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYG--------QRNKVELECRLCVR 57
          + FSGG DS+  L        +   +  ++G        QR       +  + 
Sbjct: 23 VAFSGGLDSTVLLHALSVLGVKCHAVHVNHGLSINADNWQRQCSVFASQREIA 75


>gi|75676987|ref|YP_319408.1| argininosuccinate synthase [Nitrobacter winogradskyi Nb-255]
 gi|119361299|sp|Q3SNT5|ASSY_NITWN RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|74421857|gb|ABA06056.1| argininosuccinate synthase [Nitrobacter winogradskyi Nb-255]
          Length = 409

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 4/80 (5%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCV---RKK 59
          + KK    +L +SGG D+S  L W        V T + D GQ  ++E   R       K 
Sbjct: 1  MSKKVQKVVLAYSGGLDTSIILKWLQTTYGAEVVTFTADLGQGEELEPARRKAQLLGIKD 60

Query: 60 IVELMPKWKDSLGEDHILPL 79
              +   ++    D++ P+
Sbjct: 61 ENIFIEDLREEFVRDYVFPM 80


>gi|330470075|ref|YP_004407818.1| GMP synthase [Verrucosispora maris AB-18-032]
 gi|328813046|gb|AEB47218.1| GMP synthase [Verrucosispora maris AB-18-032]
          Length = 521

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 45/184 (24%), Gaps = 16/184 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DS+   +       D++  +  D+G     E      V K  V      
Sbjct: 222 KEVICGLSGGVDSAVAAALVHKAVGDQLTCVFVDHGLLRAGE---AEQVEKDYVAAT--- 275

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                +  ++  A     + + +T     +                             G
Sbjct: 276 ---GIKLKVVDAADRFLGALAGVTDPEQKRKIIGREFIRVFEAAAREIASHGDVEFLVQG 332

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                +                 I++      L  +    +  PL  L K E   L   +
Sbjct: 333 TLYPDVVESGGGTGTA------NIKSHHNVGGLPEDLKFALVEPLRTLFKDEVRTLGLQL 386

Query: 188 GGQD 191
           G  +
Sbjct: 387 GLPE 390


>gi|313893961|ref|ZP_07827527.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Veillonella sp. oral taxon 158 str. F0412]
 gi|313441525|gb|EFR59951.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Veillonella sp. oral taxon 158 str. F0412]
          Length = 511

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 46/185 (24%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +       D++  +  D+G   K E +      K       +  
Sbjct: 218 KVLLALSGGVDSSVAAALISKAVGDQLTCIFVDHGLMRKNEGDEVEAAFKDSGMHFIRVD 277

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L      +    ++ +      +D       V       +      +     
Sbjct: 278 AEKRFLDKLAGLEDPEAKRKAIGEEFIRVFEDEGRKIGSVDFLAQGTIYPDVIESGTGEA 337

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I                              +     +  PL  L K E  +L  ++G
Sbjct: 338 EVIKSHHNVGGLP-------------------AVVDFKGLIEPLRNLFKDEVRELGSELG 378

Query: 189 GQDLV 193
             D +
Sbjct: 379 LADYL 383


>gi|303229933|ref|ZP_07316707.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Veillonella atypica ACS-134-V-Col7a]
 gi|302515299|gb|EFL57267.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Veillonella atypica ACS-134-V-Col7a]
          Length = 511

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 46/185 (24%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +       D++  +  D+G   K E +      K       +  
Sbjct: 218 KVLLALSGGVDSSVAAALISKAVGDQLTCIFVDHGLMRKNEGDEVEAAFKDSGMHFIRVD 277

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L      +    ++ +      +D       V       +      +     
Sbjct: 278 AEKRFLDKLAGLEDPEAKRKAIGEEFIRVFEDEGRKIGSVDFLAQGTIYPDVIESGTGEA 337

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I                              +     +  PL  L K E  +L  ++G
Sbjct: 338 EVIKSHHNVGGLP-------------------AVVDFKGLIEPLRNLFKDEVRELGSELG 378

Query: 189 GQDLV 193
             D +
Sbjct: 379 LADYL 383


>gi|303231772|ref|ZP_07318494.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Veillonella atypica ACS-049-V-Sch6]
 gi|302513563|gb|EFL55583.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Veillonella atypica ACS-049-V-Sch6]
          Length = 511

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 46/185 (24%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +       D++  +  D+G   K E +      K       +  
Sbjct: 218 KVLLALSGGVDSSVAAALISKAVGDQLTCIFVDHGLMRKNEGDEVEAAFKDSGMHFIRVD 277

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L      +    ++ +      +D       V       +      +     
Sbjct: 278 AEKRFLDKLAGLEDPEAKRKAIGEEFIRVFEDEGRKIGSVDFLAQGTIYPDVIESGTGEA 337

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I                              +     +  PL  L K E  +L  ++G
Sbjct: 338 EVIKSHHNVGGLP-------------------AVVDFKGLIEPLRNLFKDEVRELGSELG 378

Query: 189 GQDLV 193
             D +
Sbjct: 379 LADYL 383


>gi|294793177|ref|ZP_06758323.1| GMP synthase [Veillonella sp. 6_1_27]
 gi|294456122|gb|EFG24486.1| GMP synthase [Veillonella sp. 6_1_27]
          Length = 511

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 46/185 (24%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +       D++  +  D+G   K E +      K       +  
Sbjct: 218 KVLLALSGGVDSSVAAALISKAVGDQLTCIFVDHGLMRKNEGDEVEAAFKDSGMHFIRVD 277

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L      +    ++ +      +D       V       +      +     
Sbjct: 278 AEKRFLDKLAGLEDPEAKRKAIGEEFIRVFEDEGRKIGSVDFLAQGTIYPDVIESGTGEA 337

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I                              +     +  PL  L K E  +L  ++G
Sbjct: 338 EVIKSHHNVGGLP-------------------AVVDFKGLIEPLRNLFKDEVRELGSELG 378

Query: 189 GQDLV 193
             D +
Sbjct: 379 LADYL 383


>gi|294794793|ref|ZP_06759928.1| GMP synthase [Veillonella sp. 3_1_44]
 gi|294454155|gb|EFG22529.1| GMP synthase [Veillonella sp. 3_1_44]
          Length = 511

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 46/185 (24%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +       D++  +  D+G   K E +      K       +  
Sbjct: 218 KVLLALSGGVDSSVAAALISKAVGDQLTCIFVDHGLMRKNEGDEVEAAFKDSGMHFIRVD 277

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L      +    ++ +      +D       V       +      +     
Sbjct: 278 AEKRFLDKLAGLEDPEAKRKAIGEEFIRVFEDEGRKIGSVDFLAQGTIYPDVIESGTGEA 337

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I                              +     +  PL  L K E  +L  ++G
Sbjct: 338 EVIKSHHNVGGLP-------------------AVVDFKGLIEPLRNLFKDEVRELGSELG 378

Query: 189 GQDLV 193
             D +
Sbjct: 379 LADYL 383


>gi|294625260|ref|ZP_06703899.1| tRNA 5-methylaminomethyl-2-thiouridylate -methyltransferase
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
 gi|292600434|gb|EFF44532.1| tRNA 5-methylaminomethyl-2-thiouridylate -methyltransferase
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
          Length = 378

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 46/188 (24%), Gaps = 11/188 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            P  ++  SGG DSS        + + +  L       +          R+  V +    
Sbjct: 3   TPRIVVGVSGGVDSSVAAWKLAQQGEPIAGLFMQNWADDGSGDCRAEDDRRDAVAVCGLL 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                               S + ++   +      PN  V     +        A  LG
Sbjct: 63  GIP------FHFRDFSGEYWSGVFEHFLAEYAAGRTPNPDVLCNREVKFKHFLDAAQALG 116

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G            R                 LG         P+  L+K    +
Sbjct: 117 AERIATGHYAQVAHRGGRWRLLRGADRGKDQSYFLHQLGQTQLAATLFPIGDLEKSTLRR 176

Query: 183 LAQDIGGQ 190
           +AQD G  
Sbjct: 177 IAQDAGLP 184


>gi|282849345|ref|ZP_06258730.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Veillonella parvula ATCC 17745]
 gi|282581049|gb|EFB86447.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Veillonella parvula ATCC 17745]
          Length = 511

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 46/185 (24%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +       D++  +  D+G   K E +      K       +  
Sbjct: 218 KVLLALSGGVDSSVAAALISKAVGDQLTCIFVDHGLMRKNEGDEVEAAFKDSGMHFIRVD 277

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L      +    ++ +      +D       V       +      +     
Sbjct: 278 AEKRFLDKLAGLEDPEAKRKAIGEEFIRVFEDEGRKIGSVDFLAQGTIYPDVIESGTGEA 337

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I                              +     +  PL  L K E  +L  ++G
Sbjct: 338 EVIKSHHNVGGLP-------------------AVVDFKGLIEPLRNLFKDEVRELGSELG 378

Query: 189 GQDLV 193
             D +
Sbjct: 379 LADYL 383


>gi|238019870|ref|ZP_04600296.1| hypothetical protein VEIDISOL_01746 [Veillonella dispar ATCC 17748]
 gi|237863394|gb|EEP64684.1| hypothetical protein VEIDISOL_01746 [Veillonella dispar ATCC 17748]
          Length = 517

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 46/185 (24%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +       D++  +  D+G   K E +      K       +  
Sbjct: 224 KVLLALSGGVDSSVAAALISKAVGDQLTCIFVDHGLMRKNEGDEVEAAFKDSGMHFIRVD 283

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L      +    ++ +      +D       V       +      +     
Sbjct: 284 AEKRFLDKLAGLEDPEAKRKAIGEEFIRVFEDEGRKIGSVDFLAQGTIYPDVIESGTGEA 343

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I                              +     +  PL  L K E  +L  ++G
Sbjct: 344 EVIKSHHNVGGLP-------------------AVVDFKGLIEPLRNLFKDEVRELGSELG 384

Query: 189 GQDLV 193
             D +
Sbjct: 385 LADYL 389


>gi|148907704|gb|ABR16980.1| unknown [Picea sitchensis]
          Length = 591

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/178 (11%), Positives = 48/178 (26%), Gaps = 13/178 (7%)

Query: 13  LLFSGGQDSSTCLSWALDR----------FDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +L SGG DSS   + A              +++   SF  G +   +L+    V + +  
Sbjct: 231 VLLSGGLDSSLVAAVAARHLATTNAAKQWGEQLH--SFCVGLQGSPDLKAAKEVAEYLGT 288

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
              ++     +D I  +  +     +     +        +          + L    + 
Sbjct: 289 FHHEF-HFTVQDGIDAIEDVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVLSGEGSD 347

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
               G           ++      +   +   +        S   V   + +L K   
Sbjct: 348 EIFGGYLYFHKAPNREEFHQETCRKIKALHMYDCLRANKSTSAWGVEARVPFLDKEFI 405


>gi|49482736|ref|YP_039960.1| hypothetical protein SAR0510 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257424621|ref|ZP_05601049.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427287|ref|ZP_05603688.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257429924|ref|ZP_05606310.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257432626|ref|ZP_05608988.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257435530|ref|ZP_05611580.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
           M876]
 gi|282903095|ref|ZP_06310987.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
           C160]
 gi|282904884|ref|ZP_06312744.1| cell cycle protein MesJ [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282907831|ref|ZP_06315669.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidine synthetase)
           [Staphylococcus aureus subsp. aureus WW2703/97]
 gi|282910147|ref|ZP_06317953.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidine synthetase)
           [Staphylococcus aureus subsp. aureus WBG10049]
 gi|282913337|ref|ZP_06321128.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
           M899]
 gi|282918290|ref|ZP_06326030.1| cell cycle protein MesJ [Staphylococcus aureus subsp. aureus C427]
 gi|282923041|ref|ZP_06330727.1| cell cycle protein MesJ [Staphylococcus aureus subsp. aureus C101]
 gi|283957299|ref|ZP_06374757.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase) [Staphylococcus
           aureus subsp. aureus A017934/97]
 gi|293500386|ref|ZP_06666238.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293509325|ref|ZP_06668041.1| cell cycle protein MesJ [Staphylococcus aureus subsp. aureus M809]
 gi|293515913|ref|ZP_06670603.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
           M1015]
 gi|295427043|ref|ZP_06819680.1| cell cycle protein MesJ [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297591580|ref|ZP_06950217.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           [Staphylococcus aureus subsp. aureus MN8]
 gi|61217256|sp|Q6GJG2|TILS_STAAR RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|49240865|emb|CAG39532.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257272648|gb|EEV04768.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275938|gb|EEV07406.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257279440|gb|EEV10035.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257282491|gb|EEV12624.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257285167|gb|EEV15284.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
           M876]
 gi|282314560|gb|EFB44947.1| cell cycle protein MesJ [Staphylococcus aureus subsp. aureus C101]
 gi|282317856|gb|EFB48225.1| cell cycle protein MesJ [Staphylococcus aureus subsp. aureus C427]
 gi|282322808|gb|EFB53128.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
           M899]
 gi|282325995|gb|EFB56301.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidine synthetase)
           [Staphylococcus aureus subsp. aureus WBG10049]
 gi|282328307|gb|EFB58582.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidine synthetase)
           [Staphylococcus aureus subsp. aureus WW2703/97]
 gi|282332001|gb|EFB61510.1| cell cycle protein MesJ [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282596521|gb|EFC01481.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
           C160]
 gi|283791223|gb|EFC30033.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase) [Staphylococcus
           aureus subsp. aureus A017934/97]
 gi|290921321|gb|EFD98379.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
           M1015]
 gi|291096346|gb|EFE26606.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291467870|gb|EFF10380.1| cell cycle protein MesJ [Staphylococcus aureus subsp. aureus M809]
 gi|295129046|gb|EFG58675.1| cell cycle protein MesJ [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297575449|gb|EFH94166.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           [Staphylococcus aureus subsp. aureus MN8]
 gi|312436401|gb|ADQ75472.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           [Staphylococcus aureus subsp. aureus TCH60]
 gi|315193871|gb|EFU24265.1| hypothetical protein CGSSa00_12597 [Staphylococcus aureus subsp.
           aureus CGS00]
          Length = 431

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 58/188 (30%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++  S G DS   L   L+ +      +  L  ++G R+    E              ++
Sbjct: 15  VVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEEA-------------RF 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            ++  E H + L I       SL +N +++ +       +      +        A+ L 
Sbjct: 62  LEAYCERHHIDLHIKKLDLSHSLNRNNSIQNEARIKRYEWFDEMMNVLEADVLLTAHHLD 121

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    + +   Y      + R       L   +   ++ PL+ + K E  +  +  
Sbjct: 122 --------DQLETIMYRIFNGKSTRNKLGFDELSKRNGYQIYRPLLAVSKKEIKQFQERY 173

Query: 188 GGQDLVNL 195
                 + 
Sbjct: 174 HIPYFEDE 181


>gi|320528555|ref|ZP_08029712.1| GMP synthase protein [Solobacterium moorei F0204]
 gi|320131141|gb|EFW23714.1| GMP synthase protein [Solobacterium moorei F0204]
          Length = 513

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 53/185 (28%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS   +         +  +  D+G   K E        + ++E   +
Sbjct: 215 NDKVLLALSGGVDSSVVAALLDKAIGKNLYCMFIDHGLLRKGE-------AEGVMETFTR 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                          L  ++  S  +     I    +         ++            
Sbjct: 268 NMSLNLIKIDARERFLNKLAGVSDPEQKRKIIGSEFIYTFRDEVAKLLQGT--------- 318

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  +  G   TD          TI++      L  + +  +  PL  L K E   L  +
Sbjct: 319 DIKWLAQGTLYTDIIESGTKTAQTIKSHHNVGGLPEDMNFKLIEPLNKLFKDEVRALGTE 378

Query: 187 IGGQD 191
           +G  +
Sbjct: 379 LGLPE 383


>gi|262281632|ref|ZP_06059401.1| tRNA(Ile)-lysidine synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262262086|gb|EEY80783.1| tRNA(Ile)-lysidine synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 425

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 50/198 (25%), Gaps = 18/198 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQR--NKVELECRLCVRKKI 60
           +    LL  SGG DS T L+       +    +     ++ QR     E +    + +K+
Sbjct: 18  EHQRVLLAISGGLDSMTLLNLLYKYQKELDIELILAHINHKQRIEADQEEKQLKEIAQKL 77

Query: 61  VE------LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII 114
                       + +    D          +     T  V     D+     F+      
Sbjct: 78  GVKILTSSFSGVFSEKSARDFRYNF-FKKVMQEEDCTALVTAHHADDQAETIFMRILRGS 136

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
            L + + +  R       +     ++S                 N    + V      + 
Sbjct: 137 RLRYLSGMKDRQPFGGGELIRPLLEFSKTDFPTVFHFEDASNFENTYFRNRVRNQYFPLL 196

Query: 175 LK-----KYETWKLAQDI 187
                  K     L  +I
Sbjct: 197 ETENPRIKQAIIGLGLEI 214


>gi|300024843|ref|YP_003757454.1| argininosuccinate synthase [Hyphomicrobium denitrificans ATCC
          51888]
 gi|299526664|gb|ADJ25133.1| argininosuccinate synthase [Hyphomicrobium denitrificans ATCC
          51888]
          Length = 409

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 4/83 (4%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCV--- 56
          M    K     +L +SGG D+S  L W  + +   V T + D GQ  ++E      +   
Sbjct: 1  MTAAPKAVKKVVLAYSGGLDTSIILKWLQETYNAEVVTFTADLGQGEELEPARNKALMLG 60

Query: 57 RKKIVELMPKWKDSLGEDHILPL 79
           K     +   ++    D++ P+
Sbjct: 61 IKPENIFIEDLREEFVRDYVFPM 83


>gi|253988142|ref|YP_003039498.1| tRNA (Ile)-lysidine synthetase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253779592|emb|CAQ82753.1| tRNA (ile)-lysidine synthase [Photorhabdus asymbiotica]
          Length = 442

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 43/133 (32%), Gaps = 11/133 (8%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWAL------DRFDRVETLSFDYGQRNKVELECRL 54
           +   + +    L+ FSGG DSS  L   +      ++  ++  +   +G           
Sbjct: 12  LTKQLGEHKKILVGFSGGLDSSVLLYLLVNWRNQYNQNVQLRAIHIHHG-----LNIKAD 66

Query: 55  CVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII 114
              K   ++   W+     + +   A    I  ++      +  ++       V  +++ 
Sbjct: 67  QWVKHCQQICDDWQVEFFFEKVTIDARQKGIEAAARDARYQVFKRELQKDEILVTAQHLD 126

Query: 115 FLVFAATLAYRLG 127
                  LA + G
Sbjct: 127 DQAETFLLALKRG 139


>gi|212638582|ref|YP_002315102.1| tRNA-specific 2-thiouridylase MnmA [Anoxybacillus flavithermus WK1]
 gi|212560062|gb|ACJ33117.1| tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase
           [Anoxybacillus flavithermus WK1]
          Length = 371

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 47/184 (25%), Gaps = 10/184 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS        +   V  +             C     +   +++     
Sbjct: 9   RVVVGMSGGVDSSVAALLLKQQGYDVIGIFMKNWDDTDENGVC--TATEDYEDVVRVCNQ 66

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                + +            +      + +    PN  V     I        A  LG  
Sbjct: 67  IGIPYYAVN---FEKQYWEKVFTYFLDEYKAGRTPNPDVMCNKEIKFKAFLEHAMALGAD 123

Query: 130 NIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            +  G          + +                 LG      V  P+  L+K +  ++A
Sbjct: 124 YLATGHYARVAYRDGEYQLLRGLDANKDQTYFLNQLGQAQLSKVLFPIGELQKSKVREIA 183

Query: 185 QDIG 188
           ++ G
Sbjct: 184 KEAG 187


>gi|195498973|ref|XP_002096752.1| GE25842 [Drosophila yakuba]
 gi|194182853|gb|EDW96464.1| GE25842 [Drosophila yakuba]
          Length = 419

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            + +L +SGG D+S  L W LD+   V  +  D GQ+   +         KI       
Sbjct: 3  RETVILAYSGGLDTSCILKWLLDKQYEVVCVLADVGQK--EDFTAAEKKALKIGAKKVIV 60

Query: 68 KD 69
           D
Sbjct: 61 AD 62


>gi|315924503|ref|ZP_07920724.1| argininosuccinate synthase [Pseudoramibacter alactolyticus ATCC
          23263]
 gi|315622207|gb|EFV02167.1| argininosuccinate synthase [Pseudoramibacter alactolyticus ATCC
          23263]
          Length = 410

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 1/41 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQ 44
          + +    +L +SGG D++T + W  + +   V  +  D GQ
Sbjct: 1  MSENKKVILAYSGGLDTTTIVPWLKETYNYDVICVCVDVGQ 41


>gi|126338828|ref|XP_001378676.1| PREDICTED: similar to Zona pellucida protein C [Monodelphis
           domestica]
          Length = 428

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/133 (11%), Positives = 25/133 (18%), Gaps = 15/133 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY----------GQRNKVELECRLCVR 57
                   SGG DS+        R   V  +              G     + E    V 
Sbjct: 11  RRRVACAVSGGVDSAVAALLLRRRGYEVTGVFMRNWDALDEVSGSGCSADRDCEDAARVC 70

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           + +     +        H +    L +           +        +          L 
Sbjct: 71  RLLDIPFRQVAFVKEYWHHVFTDFLSEYEKGRTPNPDIL-----CNKHIKFKAFFHYALD 125

Query: 118 FAATLAYRLGITN 130
                A   G   
Sbjct: 126 CLGADAMATGHYA 138


>gi|71275648|ref|ZP_00651933.1| Argininosuccinate synthase [Xylella fastidiosa Dixon]
 gi|71897808|ref|ZP_00680034.1| Argininosuccinate synthase [Xylella fastidiosa Ann-1]
 gi|170729533|ref|YP_001774966.1| argininosuccinate synthase [Xylella fastidiosa M12]
 gi|71163539|gb|EAO13256.1| Argininosuccinate synthase [Xylella fastidiosa Dixon]
 gi|71732363|gb|EAO34417.1| Argininosuccinate synthase [Xylella fastidiosa Ann-1]
 gi|167964326|gb|ACA11336.1| Argininosuccinate synthase [Xylella fastidiosa M12]
          Length = 401

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 27/60 (45%), Gaps = 1/60 (1%)

Query: 7  KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +   ++L FSGG D+S C+ +  ++   V T+  D G  ++ E +       ++     
Sbjct: 1  MSKKNIVLAFSGGLDTSFCIPYLKEQGYAVHTVFADTGGVDEDERDFIEKRAAELGVASH 60


>gi|329945850|ref|ZP_08293537.1| GMP synthase domain protein [Actinomyces sp. oral taxon 170 str.
           F0386]
 gi|328528298|gb|EGF55276.1| GMP synthase domain protein [Actinomyces sp. oral taxon 170 str.
           F0386]
          Length = 528

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 56/185 (30%), Gaps = 13/185 (7%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKWK 68
            +   SGG DSS   +       D++  +  D+G  R     +      + +   +    
Sbjct: 226 VICGLSGGVDSSVAAALVHRAVGDQLTCIFVDHGLLRAGEREQVEHDYAEGMGIRVITVD 285

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           ++           L  ++  +  +     I    + +     R ++  V A     R   
Sbjct: 286 ET--------ERFLSALAGVTEPEAKRKIIGREFIRSFEAAQRRVVEAVGAEGGEIR--- 334

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +    +  PL  L K E   + +++G
Sbjct: 335 FLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPEDLDFQLIEPLRELFKDEVRTIGRELG 394

Query: 189 GQDLV 193
             + +
Sbjct: 395 VPEKI 399


>gi|312871416|ref|ZP_07731511.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus iners LEAF 3008A-a]
 gi|311093069|gb|EFQ51418.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus iners LEAF 3008A-a]
          Length = 375

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 48/186 (25%), Gaps = 13/186 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS       ++   V  +   ++   +   +       + +  +  K  
Sbjct: 8   RVVVGMSGGVDSSVSALLLKEQGYDVVGVFMKNWDDTDDSGVCTATEDFEDVKRVADKIG 67

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                              + + +    + +    PN  +     I        A +L  
Sbjct: 68  IPYYS------INFEKEYWNKVFEYFLSEYKRGRTPNPDIMCNKEIKFKSFLDFAMKLDA 121

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLKKYETWK 182
             I +G      +      H               S V          PL  L K +   
Sbjct: 122 DYIAMGHYAKTVTDKNGVVHMMRPKDGNKDQTYFLSQVTQEQLKKAIFPLADLSKPQVRM 181

Query: 183 LAQDIG 188
           +A+  G
Sbjct: 182 IAEQAG 187


>gi|309805355|ref|ZP_07699405.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus iners LactinV 09V1-c]
 gi|308165355|gb|EFO67588.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus iners LactinV 09V1-c]
          Length = 375

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 48/186 (25%), Gaps = 13/186 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS       ++   V  +   ++   +   +       + +  +  K  
Sbjct: 8   RVVVGMSGGVDSSVSALLLKEQGYDVVGVFMKNWDDTDDSGVCTATEDFEDVKRVADKIG 67

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                              + + +    + +    PN  +     I        A +L  
Sbjct: 68  IPYYS------INFEKEYWNKVFEYFLSEYKRGRTPNPDIMCNKEIKFKSFLDFAMKLDA 121

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLKKYETWK 182
             I +G      +      H               S V          PL  L K +   
Sbjct: 122 DYIAMGHYAKTVTDKNGVVHMMRPKDGNKDQTYFLSQVTQEQLKKAIFPLADLSKPQVRM 181

Query: 183 LAQDIG 188
           +A+  G
Sbjct: 182 IAEQAG 187


>gi|260462692|ref|ZP_05810898.1| GMP synthase, large subunit [Mesorhizobium opportunistum WSM2075]
 gi|259031598|gb|EEW32868.1| GMP synthase, large subunit [Mesorhizobium opportunistum WSM2075]
          Length = 520

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 53/185 (28%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS       +   D++  +  D+G      L  +      +      
Sbjct: 222 KGKVICALSGGVDSSVAALLIHEAVGDQLTCILVDHG------LMRKDEAAGVVAMFRQH 275

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +   L       L    +   S+L   V  + +   +   F+                  
Sbjct: 276 YNLPLI------LVDASEKFISALEGEVDPEKKRKTIGRLFIEVFEEEAKKLGGADFLAQ 329

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G           +   +      TI++      L    ++ +  PL  L K E   L ++
Sbjct: 330 GTLY----PDVIESVSFTGGPSVTIKSHHNVGGLPERMNMQLVEPLRELFKDEVRALGKE 385

Query: 187 IGGQD 191
           +G  +
Sbjct: 386 LGLPE 390


>gi|237785842|ref|YP_002906547.1| tRNA-specific 2-thiouridylase MnmA [Corynebacterium kroppenstedtii
           DSM 44385]
 gi|259495826|sp|C4LJJ9|MNMA_CORK4 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|237758754|gb|ACR18004.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Corynebacterium kroppenstedtii DSM 44385]
          Length = 372

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/213 (9%), Positives = 45/213 (21%), Gaps = 6/213 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR--KKIVELMPKW 67
             +   SGG DSS   +  +     V  +                     +   +     
Sbjct: 2   RVMAAMSGGVDSSVAAARLVAEGHEVIGVHLALASTPTTLRVGSRGCCSLEDSGDARRVA 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                  ++   +            N     +  N             L     +A    
Sbjct: 62  DALGIPFYVWDFSDRFREDVVDPFINSYEMGETPNPCLRCNEKIKFQAL-LDRGIALGFD 120

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                      D         +  ++    +    +    +  PL   +K +  K A+  
Sbjct: 121 AVATGHYARLKDGELRRAIDDNKDQSYVLGVLNDEQLAHCLF-PLGDTRKPDIRKEAEAA 179

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNS 220
           G          +   C++   + +   G     
Sbjct: 180 GLVTASKPDSHDI--CFIPDGNTKAFLGNHIGV 210


>gi|254479427|ref|ZP_05092757.1| GMP synthase, C-terminal domain protein [Carboxydibrachium
           pacificum DSM 12653]
 gi|214034632|gb|EEB75376.1| GMP synthase, C-terminal domain protein [Carboxydibrachium
           pacificum DSM 12653]
          Length = 512

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 53/185 (28%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+           D++  +  D G     E +  +   +K         
Sbjct: 219 KAVCALSGGVDSAVAAVLVDRAIHDQLVCIFVDTGLLRTNEGDMVIETFRK--------- 269

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                D  +      D   S L      + +   + N F+       +          G 
Sbjct: 270 ---NYDMNIVRVDAKDRFLSRLKGVTDPEEKRKIIGNVFIEVFKEEAMKIGDVKFLVQGT 326

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
               +       S         I++      L  +    +  PL  L K E  ++ +++G
Sbjct: 327 LYPDVIESGHGISST-------IKSHHNVGGLPEDIGFELIEPLRMLFKDEVRQVGKELG 379

Query: 189 GQDLV 193
             D +
Sbjct: 380 IPDEI 384


>gi|116072337|ref|ZP_01469604.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Synechococcus sp. BL107]
 gi|116064859|gb|EAU70618.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Synechococcus sp. BL107]
          Length = 389

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 53/187 (28%), Gaps = 17/187 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +  SGG DSS   +  ++    VE L+        +      C  + +V+     + 
Sbjct: 26  RVAVGLSGGVDSSLTAALLVEAGWEVEGLTL------WLMSGKGACCAEGLVDAAGICEQ 79

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR-LGI 128
                H++      +     + + +    QD   P         +        A +   +
Sbjct: 80  LGIPHHVVDT---RETFQKEIVQRLVDGYQDGITPLPCSQCNRSVKFGPMLEWAKQERHL 136

Query: 129 TNIVIGVCETDYSGYPDCRHD-------TIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
             I  G       G    RH                 +L  E+   +  PL  L K +T 
Sbjct: 137 PRIATGHYARIRHGGDRGRHQLLRGLDSRKDQSYFLYDLPQEALGRIVFPLGELTKADTR 196

Query: 182 KLAQDIG 188
             A   G
Sbjct: 197 IEAGRHG 203


>gi|78357574|ref|YP_389023.1| argininosuccinate synthase [Desulfovibrio desulfuricans subsp.
          desulfuricans str. G20]
 gi|119361272|sp|Q30YB8|ASSY_DESDG RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|78219979|gb|ABB39328.1| argininosuccinate synthase [Desulfovibrio desulfuricans subsp.
          desulfuricans str. G20]
          Length = 400

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 4  IIKKAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQ 44
          + K+    +L +SGG D+S  L   A      V TL+ D GQ
Sbjct: 1  MGKEIKKVVLAYSGGLDTSVILKWIAKTYDCEVVTLTADLGQ 42


>gi|16082344|ref|NP_394817.1| GMP synthase subunit B [Thermoplasma acidophilum DSM 1728]
 gi|13626894|sp|Q9HIH8|GUAAB_THEAC RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
           AltName: Full=GMP synthetase
 gi|10640704|emb|CAC12482.1| probable GMP synthase [Thermoplasma acidophilum]
          Length = 310

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 63/189 (33%), Gaps = 23/189 (12%)

Query: 2   NDIIKKAP-SALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKK 59
           N+I +K    A++  SGGQDSS     A     DR+  +  D G     E++      + 
Sbjct: 12  NEISEKVKGRAIIAVSGGQDSSLLSVLASQVLGDRLLCVFVDTGLIRIGEVDRVRKFFE- 70

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                    +      I+  +     +   +T     +                +F+   
Sbjct: 71  ---------EHAMNYRIVDASKRFLEALKGITDPEEKR-----------KIIGKMFIDVL 110

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
              A       ++ G    D+      + DTI++      L  E  + +  PL    K E
Sbjct: 111 NEEAENFHAEYLLQGTIAPDWIESGGQKRDTIKSHHNVGGLPKEMKLKLVEPLRDFYKDE 170

Query: 180 TWKLAQDIG 188
              +++++G
Sbjct: 171 IRAMSRELG 179


>gi|13475784|ref|NP_107351.1| GMP synthase [Mesorhizobium loti MAFF303099]
 gi|21263677|sp|Q987R3|GUAA_RHILO RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|14026540|dbj|BAB53137.1| GMP synthetase [Mesorhizobium loti MAFF303099]
          Length = 520

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 53/185 (28%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS       +   D++  +  D+G      L  +      +      
Sbjct: 222 KGKVICALSGGVDSSVAALLIHEAVGDQLTCILVDHG------LMRKDEAAGVVAMFRQH 275

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +   L       L    +   S+L   V  + +   +   F+                  
Sbjct: 276 YNLPLI------LVDASEKFISALEGEVDPEKKRKTIGRLFIEVFEEEAKKLGGADFLAQ 329

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G           +   +      TI++      L    ++ +  PL  L K E   L ++
Sbjct: 330 GTLY----PDVIESVSFTGGPSVTIKSHHNVGGLPERMNMQLVEPLRELFKDEVRALGKE 385

Query: 187 IGGQD 191
           +G  +
Sbjct: 386 LGLPE 390


>gi|154245956|ref|YP_001416914.1| argininosuccinate synthase [Xanthobacter autotrophicus Py2]
 gi|229889902|sp|A7IGW4|ASSY_XANP2 RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|154160041|gb|ABS67257.1| Argininosuccinate synthase [Xanthobacter autotrophicus Py2]
          Length = 409

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 46/158 (29%), Gaps = 5/158 (3%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +     +L +SGG D+S  L W    +   V T + D GQ  ++E        + +  
Sbjct: 1   MARDVKKVVLAYSGGLDTSVILKWLQTTYKCEVITFTADLGQGEELEP--ARKKAQLLGI 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                      +  +   +       +      + +   ++    +  + I         
Sbjct: 59  KDENIFIEDVREEFVAEYVF--PMFRANAVYEGLYLLGTSIARPLIAKKQIEIARKMGAD 116

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         +   Y      T+ A     +L
Sbjct: 117 AVSHGATGKGNDQVRFELGYYALEPEITVIAPWREWDL 154


>gi|325068144|ref|ZP_08126817.1| GMP synthase (glutamine-hydrolyzing) [Actinomyces oris K20]
          Length = 528

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 56/185 (30%), Gaps = 13/185 (7%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKWK 68
            +   SGG DSS   +       D++  +  D+G  R     +      + +   +    
Sbjct: 226 VICGLSGGVDSSVAAALVHRAIGDQLTCIFVDHGLLRAGEREQVEHDYAEGMGIRVITVD 285

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           ++           L  ++  +  +     I    + +     R +I  V A     R   
Sbjct: 286 ET--------ERFLSALAGVTEPEAKRKIIGREFIRSFEAAQRRVIEAVGAEGGEIR--- 334

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +    +  PL  L K E   + +++G
Sbjct: 335 FLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPEDLDFELIEPLRELFKDEVRAIGRELG 394

Query: 189 GQDLV 193
             + +
Sbjct: 395 VPEKI 399


>gi|320531457|ref|ZP_08032418.1| GMP synthase protein [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320136337|gb|EFW28324.1| GMP synthase protein [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 528

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 56/185 (30%), Gaps = 13/185 (7%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKWK 68
            +   SGG DSS   +       D++  +  D+G  R     +      + +   +    
Sbjct: 226 VICGLSGGVDSSVAAALVHRAIGDQLTCIFVDHGLLRAGEREQVEHDYAEGMGIRVITVD 285

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           ++           L  ++  +  +     I    + +     R +I  V A     R   
Sbjct: 286 ET--------ERFLSALAGVTEPEAKRKIIGREFIRSFEAAQRRVIEAVGAEGGEIR--- 334

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +    +  PL  L K E   + +++G
Sbjct: 335 FLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPEDLDFELIEPLRELFKDEVRAIGRELG 394

Query: 189 GQDLV 193
             + +
Sbjct: 395 VPEKI 399


>gi|320333553|ref|YP_004170264.1| argininosuccinate synthase [Deinococcus maricopensis DSM 21211]
 gi|319754842|gb|ADV66599.1| Argininosuccinate synthase [Deinococcus maricopensis DSM 21211]
          Length = 409

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 2/83 (2%)

Query: 7  KAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCV-RKKIVELM 64
            P  +L +SGG D+S  L W   +R   V   + D GQ ++VE      +    +    
Sbjct: 2  NKPKIVLAYSGGLDTSIILKWLQTERGYDVVAFTADLGQGDEVEEARVKALNTGAVSAHA 61

Query: 65 PKWKDSLGEDHILPLAILGDISH 87
             ++    D++ P+   G +  
Sbjct: 62 LDLREEFVRDYVYPMFRTGALYE 84


>gi|167043840|gb|ABZ08529.1| putative PP-loop family protein [uncultured marine crenarchaeote
          HF4000_APKG3E18]
          Length = 268

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 23/64 (35%), Gaps = 1/64 (1%)

Query: 8  APSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            + L+  SGG DS+     A          ++ DY    + ELE    +  +I      
Sbjct: 16 KNTVLVALSGGVDSALVAYSAYAKLGKSAIAVTADYKTLAQEELEYAKKISLEIGIKHIV 75

Query: 67 WKDS 70
           + +
Sbjct: 76 IEYN 79


>gi|160936182|ref|ZP_02083555.1| hypothetical protein CLOBOL_01078 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440992|gb|EDP18716.1| hypothetical protein CLOBOL_01078 [Clostridium bolteae ATCC
           BAA-613]
          Length = 513

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 52/189 (27%), Gaps = 21/189 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS            ++  +  D+G            +RK   + +  
Sbjct: 215 NGKVLCALSGGVDSSVAAVMLSKAIGKQLTCVFVDHG-----------LLRKNEGDEVEA 263

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G   +  + +       +  K V                    F+      A ++
Sbjct: 264 VFGPEGAYDLNFIRVNAQERFYARLKGVEEPEAK-------RKIIGEEFIRVFEEEAKKI 316

Query: 127 GI-TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLA 184
           G    +V G    D       +   I++      L        +  PL  L K E  K  
Sbjct: 317 GAVDYLVQGTIYPDVIESGLGKSAVIKSHHNVGGLPEHVDFKELVEPLRLLFKDEVRKAG 376

Query: 185 QDIGGQDLV 193
            ++G  + +
Sbjct: 377 LELGIPEYL 385


>gi|325298570|ref|YP_004258487.1| GMP synthase (glutamine-hydrolyzing) [Bacteroides salanitronis DSM
           18170]
 gi|324318123|gb|ADY36014.1| GMP synthase (glutamine-hydrolyzing) [Bacteroides salanitronis DSM
           18170]
          Length = 532

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 51/188 (27%), Gaps = 21/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS             +  +  D+G   K              E    
Sbjct: 238 NDKVVLGLSGGVDSSVAAVLLNKAIGKNLTCIFVDHGMLRK-------------NEFRNV 284

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D       +      +   + L      + +   +   F+         F        
Sbjct: 285 LHDYECLGLNVIGVDASEKFFTELAGVTEPERKRKIIGKGFIDV-------FDEEAHKIN 337

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +  +  G    D           I++      L  + ++ +  PL  L K E  ++ ++
Sbjct: 338 DVKWLAQGTIYPDCIESLSITGTVIKSHHNVGGLPEKMNLKLCEPLRLLFKDEVRRVGRE 397

Query: 187 IGGQDLVN 194
           +G  + + 
Sbjct: 398 LGMPEHLI 405


>gi|317056726|ref|YP_004105193.1| argininosuccinate synthase [Ruminococcus albus 7]
 gi|315448995|gb|ADU22559.1| argininosuccinate synthase [Ruminococcus albus 7]
          Length = 409

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 50/160 (31%), Gaps = 10/160 (6%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIV 61
           + K+    +L +SGG D+S  + W  + +    V  +S D GQ  +++      ++    
Sbjct: 1   MAKEIKKVVLAYSGGLDTSIIIPWLKENYNNCEVIAVSGDVGQGTELDGLEEKAIKTGAS 60

Query: 62  ELM-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           +L      +    D++ P    G +  +             +     +  R     +   
Sbjct: 61  KLYIEDLTEEFITDYVYPTVQAGAVYENQYLL-------GTSFARPIIAKRIAEIAIKEG 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
             A   G T         + +         I A     ++
Sbjct: 114 ADAICHGCTGKGNDQVRFELAIKAFAPDMQIIAPWRIWDI 153


>gi|325680830|ref|ZP_08160368.1| argininosuccinate synthase [Ruminococcus albus 8]
 gi|324107610|gb|EGC01888.1| argininosuccinate synthase [Ruminococcus albus 8]
          Length = 410

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 50/160 (31%), Gaps = 10/160 (6%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIV 61
           + K+    +L +SGG D+S  + W  + +    V  +S D GQ  +++      ++    
Sbjct: 1   MAKEIKKVVLAYSGGLDTSIIIPWLKENYNNCEVIAVSGDVGQGTELDGLEEKAIKTGAS 60

Query: 62  ELM-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           +L      +    D++ P    G +  +             +     +  R     +   
Sbjct: 61  KLYIEDLTEEFITDYVYPTVQAGAVYENQYLL-------GTSFARPIIAKRIAEIAIKEG 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
             A   G T         + +         I A     ++
Sbjct: 114 ADAICHGCTGKGNDQVRFELAIKAFAPDMQIIAPWRIWDI 153


>gi|118474439|ref|YP_892017.1| argininosuccinate synthase [Campylobacter fetus subsp. fetus 82-40]
 gi|171473002|sp|A0RP84|ASSY_CAMFF RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|118413665|gb|ABK82085.1| argininosuccinate synthase [Campylobacter fetus subsp. fetus 82-40]
          Length = 407

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 52/175 (29%), Gaps = 11/175 (6%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCV---RKKIV 61
           K     +L +SGG D+S  L W  D +   V T + D GQ  +VE   +  +    K   
Sbjct: 4   KDVKKVVLAYSGGLDTSIILKWLQDEYKCEVVTFTADIGQGEEVEPARKKAISLGIKPEN 63

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
             +   ++   +D + P+     I         ++           +  R +        
Sbjct: 64  IFIEDLREEFVKDFVFPMFRANAIYEGEYLLGTSIARP-------LIAKRLVEIAAATKA 116

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
                G T         +   Y    +  + A     +L     +  +     + 
Sbjct: 117 DCVSHGATGKGNDQVRFEIGAYALNPNIKVIAPWREWDLNSREKLLAYAEKNGID 171


>gi|317131154|ref|YP_004090468.1| argininosuccinate synthase [Ethanoligenens harbinense YUAN-3]
 gi|315469133|gb|ADU25737.1| argininosuccinate synthase [Ethanoligenens harbinense YUAN-3]
          Length = 404

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 52/216 (24%), Gaps = 29/216 (13%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + K     +L +SGG D+S  + W  +     V  +S D GQ  ++         KK   
Sbjct: 1   MKKTYKKVVLAYSGGLDTSIIIPWLKENYGCEVIAMSADVGQGEELSGL--EEKAKKTGA 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                         L +  L                               I       +
Sbjct: 59  ------------SKLYIEDLRKEFVEDCIWPTLKAGAKYEKYLLGTSFARPIIAKRLVEI 106

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A + G   I  G                 +             + +  P           
Sbjct: 107 ARKEGADAIAHGATGKG----------NDQVRFELTVKAFAPDIPIIAPWREWD---IKS 153

Query: 183 LAQDIGGQDLVNLILEESH-TCYLGKRDKRYEWGYG 217
             ++I   +  ++ L  +  T Y   ++  +    G
Sbjct: 154 RDEEIDYAEAHHIPLRITRETSYSKDKNLWHLSHEG 189


>gi|169630797|ref|YP_001704446.1| GMP synthase [glutamine-hydrolyzing] [Mycobacterium abscessus ATCC
           19977]
 gi|169242764|emb|CAM63792.1| GMP synthase [glutamine-hydrolyzing] [Mycobacterium abscessus]
          Length = 526

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 61/186 (32%), Gaps = 12/186 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            AL   SGG DS+   +       DR+  +  D+G     E   R  V    V       
Sbjct: 222 RALCALSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRSGE---RAQVEHDFVAATGATL 278

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            ++          LG+++  +  +     I    + +      +++        A   GI
Sbjct: 279 VTVDA----SETFLGELAGVTDPEAKRKIIGREFIRSFEGAVSDVVGDSRRDDTA---GI 331

Query: 129 TNIVIGVCETD-YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +V G    D            I++      L  +   T+  PL  L K E   + +++
Sbjct: 332 QFLVQGTLYPDVVESGGGSGTANIKSHHNVGGLPEDLTFTLVEPLRLLFKDEVRAVGREL 391

Query: 188 GGQDLV 193
           G  + +
Sbjct: 392 GLPEEI 397


>gi|326336310|ref|ZP_08202481.1| GMP synthase [Capnocytophaga sp. oral taxon 338 str. F0234]
 gi|325691484|gb|EGD33452.1| GMP synthase [Capnocytophaga sp. oral taxon 338 str. F0234]
          Length = 507

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 52/187 (27%), Gaps = 19/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DS+            ++  +  + G   K E E  L   + +      
Sbjct: 211 KEKVVLGLSGGVDSTVAAVLLNRAIGSQLHCIFVNNGLLRKGEFESVLQQYQGMG----- 265

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 +     L+ L  I+     + +  ++             N+ +L         +
Sbjct: 266 LNIKGVDASKEFLSALSGIADPEQKRKIIGRVFVEVFDKEAHKINNVTYLAQGTIYPDVI 325

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                         S        TI++      L    ++ +  PL  L K E  ++   
Sbjct: 326 E-------------SVSVKGPSATIKSHHNVGGLPDYMNLKIVEPLRTLFKDEVRRVGAS 372

Query: 187 IGGQDLV 193
           +     +
Sbjct: 373 LAIPAEL 379


>gi|297181122|gb|ADI17320.1| argininosuccinate synthase [uncultured actinobacterium
           HF0070_17F14]
 gi|297181213|gb|ADI17408.1| argininosuccinate synthase [uncultured Verrucomicrobiales bacterium
           HF0070_30L02]
          Length = 402

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 45/153 (29%), Gaps = 5/153 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +L +SGG D+S  L W  + F   V T + D GQ  +VE      +   +       +
Sbjct: 2   KVVLAYSGGLDTSIILRWLQETFNAEVITFTADLGQGEEVEPARAKALEMGVPAENIHIE 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D   E     +         + T      +   ++    +  R +         A   G 
Sbjct: 62  DVREEF----VRDFVYPMFRANTIYEGEYLLGTSIARPLIAKRLVEIAAEHGADAISHGA 117

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
           T         +   Y       + A      LG
Sbjct: 118 TGKGNDQVRFELGAYALSPDIQVIAPWREWELG 150


>gi|254415286|ref|ZP_05029047.1| Asparagine synthase family [Microcoleus chthonoplastes PCC 7420]
 gi|196177761|gb|EDX72764.1| Asparagine synthase family [Microcoleus chthonoplastes PCC 7420]
          Length = 591

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 23/56 (41%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           +  SGG DSST  +  +    +V+  S D+G     EL     V   +   + K  
Sbjct: 228 VFLSGGLDSSTIAALLVQAGVKVKAYSLDFGLAGVSELPYAEQVADYLNIPLVKVD 283


>gi|78212421|ref|YP_381200.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Synechococcus sp. CC9605]
 gi|123578503|sp|Q3AL87|MNMA_SYNSC RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|78196880|gb|ABB34645.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Synechococcus sp. CC9605]
          Length = 383

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 51/182 (28%), Gaps = 17/182 (9%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS   +  ++    VE L+        +      C  + +V+     +      
Sbjct: 31  LSGGVDSSLTAALLVEAGWEVEGLTL------WLMSGKGACCAEGLVDAAGICEQLGIPH 84

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA-YRLGITNIVI 133
           H++    + +     + + +    +D   P         +        A     +  I  
Sbjct: 85  HVVD---MRETFQQEIVQRLVDGYRDGITPLPCSQCNRSVKFGPMLDWALQERKLPRIAT 141

Query: 134 GVCETDYSGYPDCRHD-------TIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G       G    RH                 +L  E    +  PL  L K +T   A  
Sbjct: 142 GHYARIRHGGDRGRHQLLRGLDTRKDQSYFLYDLPQEVLGRIVFPLGELTKPDTRLEAAR 201

Query: 187 IG 188
            G
Sbjct: 202 HG 203


>gi|319940218|ref|ZP_08014571.1| tRNA(Ile)-lysidine synthase [Streptococcus anginosus 1_2_62CV]
 gi|319810689|gb|EFW07019.1| tRNA(Ile)-lysidine synthase [Streptococcus anginosus 1_2_62CV]
          Length = 425

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 44/177 (24%), Gaps = 11/177 (6%)

Query: 8   APSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKV--ELECRLCVRKKIV 61
               LL  SGG DS T L W           +     ++G R +   E E    + KK+ 
Sbjct: 19  HRKVLLAISGGLDSMTLLDWLYKYRKKLEIEIYLAHVNHGVREESDFEEEKLKKIAKKLG 78

Query: 62  E--LMPKWKDSLGEDHILPLAIL---GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
                  +     E              +   + T  V     D+     F+       L
Sbjct: 79  VSIFTSSFSGPFSEQKARDFRYAFFKKIMLEENCTALVTAHHADDQAETIFMRILRGSRL 138

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
              + +  +    N  +      +                  N  + + +      +
Sbjct: 139 FHISGMKEKQKFANGELIRPLLSFQKSNFPPIFHFEDWTNQENHYLRNRIRNEYFPL 195


>gi|269837393|ref|YP_003319621.1| GMP synthase, large subunit [Sphaerobacter thermophilus DSM 20745]
 gi|269786656|gb|ACZ38799.1| GMP synthase, large subunit [Sphaerobacter thermophilus DSM 20745]
          Length = 531

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 43/187 (22%), Gaps = 16/187 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DS+   +       D++  +  D G   + E E    V          
Sbjct: 232 KDRVLLALSGGVDSAVTAALIHRAIGDQLTPVFVDTGLLREGEPETVREV---------- 281

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G    + L  +                +                          L
Sbjct: 282 ----FGRHFHMNLVSIDASERFLTRLRGVTDPEQKRKIVGAEFVSVFEDAAARHGPFRFL 337

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                +        +         I+       L  +    +  P+  L K E   + + 
Sbjct: 338 -AQGTLYPDVIESATPRDSKTAAKIKTHHNVGGLPEDLQFELLEPVRMLFKDEVRAVGRL 396

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 397 LGLPEEI 403


>gi|212550705|ref|YP_002309022.1| argininosuccinate synthase [Candidatus Azobacteroides
          pseudotrichonymphae genomovar. CFP2]
 gi|212548943|dbj|BAG83611.1| argininosuccinate synthase [Candidatus Azobacteroides
          pseudotrichonymphae genomovar. CFP2]
          Length = 400

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 21/61 (34%), Gaps = 1/61 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               +L +SGG D S   +  + +    V T   + G   + +L+       K+     
Sbjct: 1  MKRKVVLAYSGGLDTSFCVMYLSQELGYEVYTALANTGGFTEEDLKKVEKRAYKLGAKKH 60

Query: 66 K 66
           
Sbjct: 61 V 61


>gi|319406422|emb|CBI80062.1| Argininosuccinate synthase [Bartonella sp. 1-1C]
          Length = 407

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 48/155 (30%), Gaps = 7/155 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K     +L +SGG D+S  L W  +     + T + D GQ  ++E      + +   E++
Sbjct: 5   KDIKKVVLAYSGGLDTSIILKWLQNELGAEIVTFTADLGQGEELE------LARHKAEML 58

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +  + +     +         + T      +   ++    +  R +         A 
Sbjct: 59  GVKEIYIEDLREEFVRDFVFPMFRANTVYEGAYLLGTSIARPLISKRLVEIAQKTNADAI 118

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAIN 159
             G T         + S Y       I A     N
Sbjct: 119 AHGATGKGNDQVRFELSAYALNPDIKIIAPWRDWN 153


>gi|296168797|ref|ZP_06850482.1| GMP synthase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295896531|gb|EFG76177.1| GMP synthase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 511

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 52/184 (28%), Gaps = 14/184 (7%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A+   SGG DS+   +       DR+  +  D+G     E E                  
Sbjct: 212 AICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGEREQVQR---------DFVAA 262

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +      +  A     + S +T     +            G     L    +    L   
Sbjct: 263 TGANLVTVDAADTFLKALSGVTNPEGKRKIIGRQFIRAFEGAVRDILSATGSEVDFLVQG 322

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   V E+            I++      L  +    +  PL  L K E   + +++G 
Sbjct: 323 TLYPDVVESGGGSGT----ANIKSHHNVGGLPDDLKFKLVEPLRLLFKDEVRAVGRELGL 378

Query: 190 QDLV 193
            + +
Sbjct: 379 PEEI 382


>gi|302874196|ref|YP_003842829.1| argininosuccinate synthase [Clostridium cellulovorans 743B]
 gi|307689543|ref|ZP_07631989.1| argininosuccinate synthase [Clostridium cellulovorans 743B]
 gi|302577053|gb|ADL51065.1| argininosuccinate synthase [Clostridium cellulovorans 743B]
          Length = 405

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 52/156 (33%), Gaps = 9/156 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM- 64
           K    +L +SGG D+S  ++W  + +   +  +S D GQ +  E+     ++    +L  
Sbjct: 5   KIKKVVLAYSGGLDTSVIITWLKENYNCEIVAVSGDVGQGDDYEVLKEKAIKTGASKLYI 64

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              K+   E++I P    G +  +             +     +  + +         A 
Sbjct: 65  ADLKEEFVEEYIFPTLKAGAVYEN-------KYFLGTSFARPIIAKKIVEIAKAEGADAI 117

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
             G T         + +      +  I A     ++
Sbjct: 118 VHGCTGKGNDQVRFELAIKAYAPNMKIIAPWRIWDI 153


>gi|225851469|ref|YP_002731703.1| argininosuccinate synthase [Persephonella marina EX-H1]
 gi|225645666|gb|ACO03852.1| argininosuccinate synthase [Persephonella marina EX-H1]
          Length = 399

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 35/86 (40%), Gaps = 1/86 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK-KIVELMP 65
               +L +SGG D+S  + W  D+   V T + D GQ  +++           +  ++ 
Sbjct: 1  MKKRVVLAYSGGLDTSVIVRWLTDKGFEVITYTADVGQGEELDEIEEKAKASGAVEAIID 60

Query: 66 KWKDSLGEDHILPLAILGDISHSSLT 91
            K+    ++ +PL   G +     T
Sbjct: 61 DIKEEFAREYCMPLMRSGALYEGRYT 86


>gi|198283303|ref|YP_002219624.1| tRNA(Ile)-lysidine synthetase [Acidithiobacillus ferrooxidans
          ATCC 53993]
 gi|218665676|ref|YP_002425891.1| tRNA(Ile)-lysidine synthetase [Acidithiobacillus ferrooxidans
          ATCC 23270]
 gi|198247824|gb|ACH83417.1| tRNA(Ile)-lysidine synthetase [Acidithiobacillus ferrooxidans
          ATCC 53993]
 gi|218517889|gb|ACK78475.1| tRNA(Ile)-lysidine synthetase [Acidithiobacillus ferrooxidans
          ATCC 23270]
          Length = 464

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
          + +SGG DS+  L   L     +  L  D+G  +    +     +++   L
Sbjct: 31 VAYSGGGDSTALLVALLSLGYEIHALHVDHGW-HPDSAQWARFCQEQAKAL 80


>gi|158300718|ref|XP_320574.3| AGAP011960-PA [Anopheles gambiae str. PEST]
 gi|157013296|gb|EAA00244.3| AGAP011960-PA [Anopheles gambiae str. PEST]
          Length = 377

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/147 (13%), Positives = 33/147 (22%), Gaps = 4/147 (2%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                ++  SGG DS+        R   V                C     +   +    
Sbjct: 1   MFRRVVVGISGGVDSAVSAYLLKKRGFEVCGAFMKNWDLIDESGYCSGE--QDFEDAQRL 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +        +    + D         +             +  R+I F  F      RL
Sbjct: 59  CRTLNIPLEEIN--FVKDYWVEVFGNFLKDYEAGITPNPDILCNRHIKFNRFFHHARERL 116

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRA 153
           G   I  G       G    R++    
Sbjct: 117 GADAIATGHYARTNFGPFLERYNENEK 143


>gi|149198953|ref|ZP_01875994.1| argininosuccinate synthase [Lentisphaera araneosa HTCC2155]
 gi|149137948|gb|EDM26360.1| argininosuccinate synthase [Lentisphaera araneosa HTCC2155]
          Length = 411

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 45/166 (27%), Gaps = 13/166 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K     +  SGG DS T     ++    V   S D GQ ++          K I +++ K
Sbjct: 7   KGKKIGICVSGGLDSKTVTKRLMEEGLDVVCFSADLGQPDE----------KDINDIVKK 56

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +      +I+ +    D       + +      +            + +        + 
Sbjct: 57  MEPCGAPTYIVDV---KDDMAEICFETIKASATYDGGYWNTTGIARAVTVRGIIREMQKH 113

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
           G+  +  G            R+    A E  +         +    
Sbjct: 114 GVDVLCHGATGRGNDQMRFERYTRALAPEMGVYAPWRDPELLEQFP 159


>gi|45357636|ref|NP_987193.1| argininosuccinate synthase [Methanococcus maripaludis S2]
 gi|47605395|sp|P61527|ASSY_METMP RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|45047196|emb|CAF29629.1| Argininosuccinate synthase [Methanococcus maripaludis S2]
          Length = 397

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 61/190 (32%), Gaps = 22/190 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +   A+L +SGG D+S CL    D++  +V +++ D GQ  + +L+      KK   L  
Sbjct: 2   QEKIAVLAYSGGLDTSCCLKLLEDKYDYKVISVAVDVGQ-PEDDLKEPEEKAKKFGVL-- 58

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  + + +      +                             +  +  A LA  
Sbjct: 59  -------KHYTID---AKEEFAKDYIFRAIKANALYEGYPLSTALARPLIAIKIAELAQE 108

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G + I  G        +        +  E  I   +          + L + E    A+
Sbjct: 109 VGASAISHGCTGKGNDQFRFESVMRAKTPEIEIVAPIRD--------LNLTRTEEIAYAK 160

Query: 186 DIGGQDLVNL 195
           + G    V+L
Sbjct: 161 EKGIPVPVDL 170


>gi|296501081|ref|YP_003662781.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Bacillus thuringiensis BMB171]
 gi|296322133|gb|ADH05061.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Bacillus thuringiensis BMB171]
          Length = 466

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 55/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 172 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFHMN 228

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       +  L  +              ++      + G   I++        + G
Sbjct: 229 VIKVDARDRF-MDKLKGV--------------EDPEQKRKIIGNEFIYVFDDEASKLQ-G 272

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 273 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 332

Query: 188 GGQDLV 193
           G  D +
Sbjct: 333 GIPDEI 338


>gi|228956693|ref|ZP_04118482.1| GMP synthase, large subunit [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|229042155|ref|ZP_04189912.1| GMP synthase, large subunit [Bacillus cereus AH676]
 gi|229143053|ref|ZP_04271489.1| GMP synthase, large subunit [Bacillus cereus BDRD-ST24]
 gi|228640418|gb|EEK96812.1| GMP synthase, large subunit [Bacillus cereus BDRD-ST24]
 gi|228727190|gb|EEL78390.1| GMP synthase, large subunit [Bacillus cereus AH676]
 gi|228802994|gb|EEM49823.1| GMP synthase, large subunit [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 515

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 55/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 221 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFHMN 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       +  L  +              ++      + G   I++        + G
Sbjct: 278 VIKVDARDRF-MDKLKGV--------------EDPEQKRKIIGNEFIYVFDDEASKLQ-G 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 322 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 381

Query: 188 GGQDLV 193
           G  D +
Sbjct: 382 GIPDEI 387


>gi|223040620|ref|ZP_03610890.1| argininosuccinate synthase [Campylobacter rectus RM3267]
 gi|222878078|gb|EEF13189.1| argininosuccinate synthase [Campylobacter rectus RM3267]
          Length = 407

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCV 56
          + K     +L +SGG D+S  L W  D +   V T + D GQ  ++E   +  +
Sbjct: 1  MKKDVKKVVLAYSGGLDTSIILKWLQDEYKCEVVTFTADIGQGEELEPARQKAL 54


>gi|194292982|ref|YP_002008889.1| argininosuccinate synthase [Cupriavidus taiwanensis LMG 19424]
 gi|193226886|emb|CAQ72837.1| argininosuccinate synthetase [Cupriavidus taiwanensis LMG 19424]
          Length = 441

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +      K       +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEPDYDDIPRRAKAYGAEEARLVD 72


>gi|160888906|ref|ZP_02069909.1| hypothetical protein BACUNI_01326 [Bacteroides uniformis ATCC 8492]
 gi|317479366|ref|ZP_07938500.1| tRNA methyl transferase [Bacteroides sp. 4_1_36]
 gi|156861805|gb|EDO55236.1| hypothetical protein BACUNI_01326 [Bacteroides uniformis ATCC 8492]
 gi|316904440|gb|EFV26260.1| tRNA methyl transferase [Bacteroides sp. 4_1_36]
          Length = 354

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/181 (12%), Positives = 48/181 (26%), Gaps = 7/181 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +L SGG DSS  +    ++  R        G+ +   ++C     + +       +    
Sbjct: 5   VLLSGGVDSSVVVHLLCEQGYRPSLFYIKIGRDDADYMDCS--AEEDMEMASAIARRYGL 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
              ++ L    +         +    +        +  + I F  F   +     +T   
Sbjct: 63  SLEVVDLH--REYWDQVAAYAIDKIRRGLTPNPDVMCNKLIKFGCFEQRVGKDFDVTATG 120

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW---LKKYETWKLAQDIGG 189
                    G            +    L    ++ V   +     L K E   +A   G 
Sbjct: 121 HYATTVLRDGKTWLGTAADSVKDQTDFLAQIDYLQVSKLMFPLGRLMKNEVRDIALRAGL 180

Query: 190 Q 190
            
Sbjct: 181 P 181


>gi|30018516|ref|NP_830147.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Bacillus cereus ATCC 14579]
 gi|229125762|ref|ZP_04254790.1| GMP synthase, large subunit [Bacillus cereus BDRD-Cer4]
 gi|44887947|sp|Q81IS3|GUAA_BACCR RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|29894056|gb|AAP07348.1| GMP synthase, glutamine-hydrolyzing [Bacillus cereus ATCC 14579]
 gi|228657702|gb|EEL13512.1| GMP synthase, large subunit [Bacillus cereus BDRD-Cer4]
          Length = 515

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 55/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 221 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFHMN 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       +  L  +              ++      + G   I++        + G
Sbjct: 278 VIKVDARDRF-MDKLKGV--------------EDPEQKRKIIGNEFIYVFDDEASKLQ-G 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 322 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 381

Query: 188 GGQDLV 193
           G  D +
Sbjct: 382 GIPDEI 387


>gi|307251974|ref|ZP_07533875.1| Argininosuccinate synthase [Actinobacillus pleuropneumoniae
          serovar 6 str. Femo]
 gi|306860666|gb|EFM92678.1| Argininosuccinate synthase [Actinobacillus pleuropneumoniae
          serovar 6 str. Femo]
          Length = 464

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 38 IAFSGGLDTSAALLWMRKKGAVPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 94


>gi|307247425|ref|ZP_07529472.1| Argininosuccinate synthase [Actinobacillus pleuropneumoniae
          serovar 2 str. S1536]
 gi|306856122|gb|EFM88278.1| Argininosuccinate synthase [Actinobacillus pleuropneumoniae
          serovar 2 str. S1536]
          Length = 464

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 38 IAFSGGLDTSAALLWMRKKGAVPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 94


>gi|307245254|ref|ZP_07527345.1| Argininosuccinate synthase [Actinobacillus pleuropneumoniae
          serovar 1 str. 4074]
 gi|307249645|ref|ZP_07531631.1| Argininosuccinate synthase [Actinobacillus pleuropneumoniae
          serovar 4 str. M62]
 gi|307254201|ref|ZP_07536046.1| Argininosuccinate synthase [Actinobacillus pleuropneumoniae
          serovar 9 str. CVJ13261]
 gi|307256468|ref|ZP_07538250.1| Argininosuccinate synthase [Actinobacillus pleuropneumoniae
          serovar 10 str. D13039]
 gi|307258666|ref|ZP_07540401.1| Argininosuccinate synthase [Actinobacillus pleuropneumoniae
          serovar 11 str. 56153]
 gi|307260897|ref|ZP_07542583.1| Argininosuccinate synthase [Actinobacillus pleuropneumoniae
          serovar 12 str. 1096]
 gi|307263024|ref|ZP_07544646.1| Argininosuccinate synthase [Actinobacillus pleuropneumoniae
          serovar 13 str. N273]
 gi|306853898|gb|EFM86112.1| Argininosuccinate synthase [Actinobacillus pleuropneumoniae
          serovar 1 str. 4074]
 gi|306858343|gb|EFM90413.1| Argininosuccinate synthase [Actinobacillus pleuropneumoniae
          serovar 4 str. M62]
 gi|306862901|gb|EFM94850.1| Argininosuccinate synthase [Actinobacillus pleuropneumoniae
          serovar 9 str. CVJ13261]
 gi|306865098|gb|EFM96999.1| Argininosuccinate synthase [Actinobacillus pleuropneumoniae
          serovar 10 str. D13039]
 gi|306867323|gb|EFM99176.1| Argininosuccinate synthase [Actinobacillus pleuropneumoniae
          serovar 11 str. 56153]
 gi|306869464|gb|EFN01255.1| Argininosuccinate synthase [Actinobacillus pleuropneumoniae
          serovar 12 str. 1096]
 gi|306871650|gb|EFN03372.1| Argininosuccinate synthase [Actinobacillus pleuropneumoniae
          serovar 13 str. N273]
          Length = 464

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 38 IAFSGGLDTSAALLWMRKKGAVPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 94


>gi|303249785|ref|ZP_07335989.1| argininosuccinate synthase [Actinobacillus pleuropneumoniae
          serovar 6 str. Femo]
 gi|302651352|gb|EFL81504.1| argininosuccinate synthase [Actinobacillus pleuropneumoniae
          serovar 6 str. Femo]
          Length = 443

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 17 IAFSGGLDTSAALLWMRKKGAVPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 73


>gi|303252665|ref|ZP_07338828.1| argininosuccinate synthase [Actinobacillus pleuropneumoniae
          serovar 2 str. 4226]
 gi|302648633|gb|EFL78826.1| argininosuccinate synthase [Actinobacillus pleuropneumoniae
          serovar 2 str. 4226]
          Length = 443

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 17 IAFSGGLDTSAALLWMRKKGAVPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 73


>gi|298693839|gb|ADI97061.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 431

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 57/188 (30%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++  S G DS   L   L+ +      +  L  ++G R+    E              ++
Sbjct: 15  VVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEEA-------------RF 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            ++  E H + L I       SL +N +++ +       +      +        A+ L 
Sbjct: 62  LEAYCERHHIDLHIKKLDLSHSLNRNNSIQNEARIKRYEWFDEMMNVLEADVLLTAHHLD 121

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    + +   Y      + R       L       ++ PL+ + K E  +  +  
Sbjct: 122 --------DQLETIMYRIFNGKSTRNKLGFDELSKRKGYQIYRPLLAVSKKEIKQFQERY 173

Query: 188 GGQDLVNL 195
                 + 
Sbjct: 174 HIPYFEDE 181


>gi|296282204|ref|ZP_06860202.1| GMP synthase [Citromicrobium bathyomarinum JL354]
          Length = 524

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 54/183 (29%), Gaps = 17/183 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS       +   +++  +  D+G   + E E    + +          
Sbjct: 228 KVICGLSGGVDSSVAAILIHEAIGEQLTCVFVDHGLLRQGEREQVETMFR---------- 277

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + + +PL ++                +                       A  L  
Sbjct: 278 ----DHYNIPLVVVDAEERFMAGLAGETDPEKKRKFIGGEFINVFEEEANRIGGADFLAQ 333

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+    +      TI++      L    ++ +  PL  L K E   L +++G
Sbjct: 334 GTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMNMQLVEPLRELFKDEVRDLGRELG 391

Query: 189 GQD 191
             D
Sbjct: 392 LPD 394


>gi|240851511|ref|ZP_04752262.1| argininosuccinate synthase [Actinobacillus minor 202]
 gi|240310029|gb|EER48321.1| argininosuccinate synthase [Actinobacillus minor 202]
          Length = 443

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 17 IAFSGGLDTSAALLWMRKKGAVPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 73


>gi|240948619|ref|ZP_04752992.1| argininosuccinate synthase [Actinobacillus minor NM305]
 gi|240297127|gb|EER47698.1| argininosuccinate synthase [Actinobacillus minor NM305]
          Length = 443

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 17 IAFSGGLDTSAALLWMRKKGAVPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 73


>gi|165975881|ref|YP_001651474.1| argininosuccinate synthase [Actinobacillus pleuropneumoniae
          serovar 3 str. JL03]
 gi|165875982|gb|ABY69030.1| argininosuccinate synthetase [Actinobacillus pleuropneumoniae
          serovar 3 str. JL03]
          Length = 443

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 17 IAFSGGLDTSAALLWMRKKGAVPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 73


>gi|254361531|ref|ZP_04977669.1| argininosuccinate synthase [Mannheimia haemolytica PHL213]
 gi|261492156|ref|ZP_05988727.1| argininosuccinate synthase [Mannheimia haemolytica serotype A2
          str. BOVINE]
 gi|261495748|ref|ZP_05992190.1| argininosuccinate synthase [Mannheimia haemolytica serotype A2
          str. OVINE]
 gi|153093049|gb|EDN74065.1| argininosuccinate synthase [Mannheimia haemolytica PHL213]
 gi|261308603|gb|EEY09864.1| argininosuccinate synthase [Mannheimia haemolytica serotype A2
          str. OVINE]
 gi|261312229|gb|EEY13361.1| argininosuccinate synthase [Mannheimia haemolytica serotype A2
          str. BOVINE]
          Length = 443

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 17 IAFSGGLDTSAALLWMRKKGAVPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 73


>gi|153807884|ref|ZP_01960552.1| hypothetical protein BACCAC_02170 [Bacteroides caccae ATCC 43185]
 gi|149129493|gb|EDM20707.1| hypothetical protein BACCAC_02170 [Bacteroides caccae ATCC 43185]
          Length = 354

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/176 (13%), Positives = 48/176 (27%), Gaps = 7/176 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
            L SGG DSS  +    ++  +        G      ++C     + I       +    
Sbjct: 5   ALLSGGVDSSVVVHLLCEQGYKPTLFYIKIGMDGAEYMDCS--AEEDIELSTATARKYGL 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
              ++ L    +   +     +    +        +  + I F  F   +      T   
Sbjct: 63  SLEVVDLH--REYWDNVAAYAIDKIKKGLTPNPDVMCNKLIKFGCFEQRIGKDFDYTATG 120

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLAQ 185
                   +G            +    L    ++ V     P+  L K+E  ++A 
Sbjct: 121 HYATTLQRNGKTWLGTAKDPVKDQTDFLAQIDYLQVSKLMFPIGGLMKHEVREIAL 176


>gi|126207906|ref|YP_001053131.1| argininosuccinate synthase [Actinobacillus pleuropneumoniae L20]
 gi|190149715|ref|YP_001968240.1| argininosuccinate synthase [Actinobacillus pleuropneumoniae
          serovar 7 str. AP76]
 gi|126096698|gb|ABN73526.1| argininosuccinate synthase [Actinobacillus pleuropneumoniae
          serovar 5b str. L20]
 gi|189914846|gb|ACE61098.1| argininosuccinate synthase [Actinobacillus pleuropneumoniae
          serovar 7 str. AP76]
          Length = 443

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 17 IAFSGGLDTSAALLWMRKKGAVPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 73


>gi|45358644|ref|NP_988201.1| putative LPS biosynthesis protein WbpG [Methanococcus maripaludis
           S2]
 gi|45047510|emb|CAF30637.1| putative LPS biosynthesis protein WbpG [Methanococcus maripaludis
           S2]
          Length = 370

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/210 (9%), Positives = 51/210 (24%), Gaps = 20/210 (9%)

Query: 3   DIIKKAPS-----ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           ++IKK         ++  SGG DS+           +   +  D G  +++ +       
Sbjct: 55  NLIKKNGKNKRYDCIIGVSGGVDSTYVAYLVKKLGLKPLAVHLDNGWNSELAIMNIENTL 114

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           KK+   +     +  E   L L+ L         +          L            + 
Sbjct: 115 KKLDIDLYTRVLNWEEFKDLQLSFLKASVP--DLEIPTDHAIIATLYEVAHKFGIKYIIS 172

Query: 118 FAATLAYRLGI--TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV------- 168
               +   +G+   +      +          +  +        L +  +  +       
Sbjct: 173 GHNIITESIGVPMWSNGHYDWKYISGLQKKFGNIKLLDYPKMTPLNIFYYQFIKDIKMIR 232

Query: 169 HTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
                   K        ++  ++       
Sbjct: 233 ILNYADYDKKRVV----ELIEKEFSWKDYP 258


>gi|88810769|ref|ZP_01126026.1| putative LPS biosynthesis protein WbpG [Nitrococcus mobilis Nb-231]
 gi|88792399|gb|EAR23509.1| putative LPS biosynthesis protein WbpG [Nitrococcus mobilis Nb-231]
          Length = 360

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 27/79 (34%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +K    ++  SGG DS+           R   + FD G  ++  +        ++   + 
Sbjct: 53  RKPYDCVIGVSGGVDSTYVAYLTKQLGLRPLAVHFDNGWDSEFAVANIEKTLDRLSIDLY 112

Query: 66  KWKDSLGEDHILPLAILGD 84
            +     E   L L+ L  
Sbjct: 113 TYVVDWEEFKDLQLSFLKA 131


>gi|46143274|ref|ZP_00135571.2| COG0137: Argininosuccinate synthase [Actinobacillus
          pleuropneumoniae serovar 1 str. 4074]
          Length = 213

 Score = 46.1 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 38 IAFSGGLDTSAALLWMRKKGAVPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 94


>gi|331265449|ref|YP_004325079.1| putative MesJ/Ycf62 family protein [Streptococcus oralis Uo5]
 gi|326682121|emb|CBY99737.1| putative MesJ/Ycf62 family protein [Streptococcus oralis Uo5]
          Length = 425

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/211 (11%), Positives = 49/211 (23%), Gaps = 13/211 (6%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKV-ELECRLCVR 57
           +  KK    LL  SGG DS            +    +     ++ QRN+    E  L   
Sbjct: 14  EYFKKHSKVLLALSGGLDSMFLYHLLSTYQKELGIELILAHVNHKQRNESDWEENELRKL 73

Query: 58  KKIVELMPKWKDSLGED-----HILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGR 111
               EL        G+                I   +     +     D+ +    +   
Sbjct: 74  ADAAELPIYITSFSGDFSEARAREFRYDFFRKIMKDAGATALITAHHADDQVETILMRLI 133

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
               L     +     +  I I     ++              +            +   
Sbjct: 134 RGSRLRHLTGIKEGQVVDGIEIIRPLLNFHKKDFLPIAHFE--DQTNQESTYFRNRIRNR 191

Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHT 202
            +   + E  +L   +          + + T
Sbjct: 192 YLPELEKENPRLKSALLDFGREISDYQATIT 222


>gi|317488697|ref|ZP_07947236.1| arginosuccinate synthase [Eggerthella sp. 1_3_56FAA]
 gi|316912213|gb|EFV33783.1| arginosuccinate synthase [Eggerthella sp. 1_3_56FAA]
          Length = 464

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 8  APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
             A+L +SGG D+S C+ W  +     V  +  D GQ ++   + +    K
Sbjct: 12 KDKAVLAYSGGLDTSVCIKWLQEEKNLDVIAVVGDVGQEHEGLEKIKQKALK 63


>gi|296130388|ref|YP_003637638.1| GMP synthase, large subunit [Cellulomonas flavigena DSM 20109]
 gi|296022203|gb|ADG75439.1| GMP synthase, large subunit [Cellulomonas flavigena DSM 20109]
          Length = 533

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 54/187 (28%), Gaps = 15/187 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS   +       D++  +  D+G     E      V +  V       
Sbjct: 230 RVICGLSGGVDSSVAAALVQRAVGDQLTCVFVDHGLLRAGE---AEQVEQDFVAAT---- 282

Query: 69  DSLGEDHILP--LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +  ++      L  ++  +  +     I    +       R ++    A   A   
Sbjct: 283 --GVQLKVVDARERFLTALAGVTDPETKRKIIGREFIRVFEDAARQVVEDAGAHGEAVE- 339

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +               I++      L  +    +  PL  L K E   +  +
Sbjct: 340 --FLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPDDLQFELVEPLRTLFKDEVRAVGLE 397

Query: 187 IGGQDLV 193
           +G  +++
Sbjct: 398 LGVPEVI 404


>gi|78356066|ref|YP_387515.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
 gi|123552952|sp|Q313S6|MNMA_DESDG RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|78218471|gb|ABB37820.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 356

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/182 (9%), Positives = 35/182 (19%), Gaps = 10/182 (5%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR------LCVRKKIVELMPK 66
           +  SGG DS   L   L+   +V  L   +   +                 + +      
Sbjct: 5   VAVSGGTDSLFALLQVLEAGHQVTALHAHFLSPHDTPETTAHNTQAIEKACRALGADFHV 64

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              S      +    +                   N    F    +    + A  +A   
Sbjct: 65  EDLSAAFRKHVIEPFIDAYRQGRT----PNPCARCNASMKFGLLADTARKLGAQAIATGH 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                       +                    +          PL   +K +     + 
Sbjct: 121 YARLQPDLPRPGNTVSLWRGDDPAKDQSYFLSLVPQHRLACAVFPLGGWRKQDVRAHLKQ 180

Query: 187 IG 188
            G
Sbjct: 181 RG 182


>gi|311069234|ref|YP_003974157.1| tRNA-specific 2-thiouridylase MnmA [Bacillus atrophaeus 1942]
 gi|310869751|gb|ADP33226.1| tRNA-specific 2-thiouridylase MnmA [Bacillus atrophaeus 1942]
          Length = 371

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/147 (12%), Positives = 36/147 (24%), Gaps = 7/147 (4%)

Query: 4   IIKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           + K+      ++  SGG DSS       ++   V  +             C     +   
Sbjct: 1   MEKRPEDTRVVVGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGFC--TATEDYE 58

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +++          + +            + +    + +    PN  V     I       
Sbjct: 59  DVIRVCNQIGIPYYAVN---FEKQYWDKVFQYFLDEYKAGRTPNPDVMCNKEIKFKAFLE 115

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRH 148
            A  LG   +  G            R 
Sbjct: 116 HALSLGADYLATGHYARVDRSGGKVRM 142


>gi|284161173|ref|YP_003399796.1| ExsB family protein [Archaeoglobus profundus DSM 5631]
 gi|284011170|gb|ADB57123.1| ExsB family protein [Archaeoglobus profundus DSM 5631]
          Length = 259

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 56/178 (31%), Gaps = 34/178 (19%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            +++FSGG DS T      D   RV  ++      +K ++E    V K+I          
Sbjct: 19  VVVMFSGGVDSVTLTKLCKDVIKRVFAVTVVSEVLSKYDVEYAKSVAKEIG--------- 69

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
             + +IL + +L D +     +N                      +      A  +G+  
Sbjct: 70  -VDHYILEIDLLNDENFVRNDEN-------------RCYFCKKKMIRMVKEFASAVGVEC 115

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
           IV    E       +      RA+           V +        K E   +A+ +G
Sbjct: 116 IV----EGTNVSELNEYRPGYRAVVEEGVYSPWIEVGI-------DKEEIRSIAKKLG 162


>gi|269797249|ref|YP_003311149.1| GMP synthase, large subunit [Veillonella parvula DSM 2008]
 gi|269093878|gb|ACZ23869.1| GMP synthase, large subunit [Veillonella parvula DSM 2008]
          Length = 511

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 46/185 (24%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +       D++  +  D+G   K E +      K       +  
Sbjct: 218 KVLLALSGGVDSSVAAALISKAVGDQLTCIFVDHGLMRKNEGDEVEAAFKDSGMHFIRVD 277

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L      +    ++ +      +D       V       +      +     
Sbjct: 278 AEKRFLDKLAGLEDPEAKRKAIGEEFIRVFEDEGRKIGSVDFLAQGTIYPDVIESGTGEA 337

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I                              +     +  PL  L K E  +L  ++G
Sbjct: 338 EIIKSHHNVGGLP-------------------AVVDFKGLIEPLRNLFKDEVRELGSELG 378

Query: 189 GQDLV 193
             D +
Sbjct: 379 LADYL 383


>gi|183219514|ref|YP_001837510.1| argininosuccinate synthase [Leptospira biflexa serovar Patoc
          strain 'Patoc 1 (Paris)']
 gi|189909656|ref|YP_001961211.1| argininosuccinate synthase [Leptospira biflexa serovar Patoc
          strain 'Patoc 1 (Ames)']
 gi|229889878|sp|B0S9J6|ASSY_LEPBA RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|229889879|sp|B0SJR2|ASSY_LEPBP RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|167774332|gb|ABZ92633.1| Argininosuccinate synthase [Leptospira biflexa serovar Patoc
          strain 'Patoc 1 (Ames)']
 gi|167777936|gb|ABZ96234.1| Argininosuccinate synthase (Citrulline--aspartate ligase)
          [Leptospira biflexa serovar Patoc strain 'Patoc 1
          (Paris)']
          Length = 402

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 8  APSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNK 47
              +L +SGG D+S  L+W  D     V     D GQ+ +
Sbjct: 7  PKKIVLAYSGGLDTSVILAWLKDTYGCEVIAFCADVGQKEE 47


>gi|45358802|ref|NP_988359.1| hypothetical protein MMP1239 [Methanococcus maripaludis S2]
 gi|45047668|emb|CAF30795.1| Conserved hypothetical protein [Methanococcus maripaludis S2]
          Length = 258

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 23/62 (37%), Gaps = 1/62 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
          K    ++ +SGG DS+     A     +   ++ D G  ++  ++      KK       
Sbjct: 20 KNKKVIVAYSGGVDSTLISKIA-SDNAQTLAVTIDNGFFSENVIKKAENRAKKYNIPQKT 78

Query: 67 WK 68
           K
Sbjct: 79 IK 80


>gi|329570895|gb|EGG52605.1| GMP synthase domain protein [Enterococcus faecalis TX1467]
          Length = 523

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 56/186 (30%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V + +       
Sbjct: 223 KKVLLGLSGGVDSSVVGVLLQKAIGDQLTCIFVDHGLLRKGE---AEQVMESLGGKFG-- 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      L I+   +       +A                  +F   A  LA   G
Sbjct: 278 -----------LNIIKVDAKERFLSKLAGVSDPEQKRKIIGNEFVYVFDDEATKLAGEEG 326

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           ++ +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 327 VSFLAQGTLYTDVIESGTETAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRALGTEL 386

Query: 188 GGQDLV 193
           G  D +
Sbjct: 387 GMPDAI 392


>gi|315171357|gb|EFU15374.1| GMP synthase protein [Enterococcus faecalis TX1342]
          Length = 520

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 56/186 (30%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V + +       
Sbjct: 223 KKVLLGLSGGVDSSVVGVLLQKALGDQLTCIFVDHGLLRKGE---AEQVMESLGGKFG-- 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      L I+   +       +A                  +F   A  LA   G
Sbjct: 278 -----------LNIIKVDAKERFLSKLAGVSDPEQKRKIIGNEFVYVFDDEATKLAGEEG 326

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           ++ +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 327 VSFLAQGTLYTDVIESGTETAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRALGTEL 386

Query: 188 GGQDLV 193
           G  D +
Sbjct: 387 GMPDAI 392


>gi|326791555|ref|YP_004309376.1| argininosuccinate synthase [Clostridium lentocellum DSM 5427]
 gi|326542319|gb|ADZ84178.1| argininosuccinate synthase [Clostridium lentocellum DSM 5427]
          Length = 402

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 2/84 (2%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI-VELM 64
               +L +SGG D+S  + W  + +   V  +  + GQ  ++E      +   +    +
Sbjct: 1  MKEKVVLAYSGGLDTSVIIPWLKENYDYDVIAVCINVGQDAELEGLEERALSMGVSKVYV 60

Query: 65 PKWKDSLGEDHILPLAILGDISHS 88
             KD    +++ P+   G I  S
Sbjct: 61 ENVKDEFMREYVFPMIQSGAIYES 84


>gi|284023518|ref|ZP_06377916.1| hypothetical protein Saura13_02954 [Staphylococcus aureus subsp.
           aureus 132]
          Length = 431

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 57/188 (30%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++  S G DS   L   L+ +      +  L  ++G R+    E              ++
Sbjct: 15  VVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEEA-------------RF 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            ++  E H + L I       SL +N +++ +       +      +        A+ L 
Sbjct: 62  LEAYCERHHIDLHIKKLDLSHSLDRNNSIQNEARIKRYEWFDEMMNVLEADVLLTAHHLD 121

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    + +   Y      + R       L       ++ PL+ + K E  +  +  
Sbjct: 122 --------DQLETIMYRIFNGKSTRNKLGFDELSKRKGYQIYRPLLAVSKKEIKQFQERY 173

Query: 188 GGQDLVNL 195
                 + 
Sbjct: 174 HIPYFEDE 181


>gi|257421462|ref|ZP_05598452.1| bifunctional GMP synthase/glutamine amidotransferase [Enterococcus
           faecalis X98]
 gi|257163286|gb|EEU93246.1| bifunctional GMP synthase/glutamine amidotransferase [Enterococcus
           faecalis X98]
          Length = 455

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 56/186 (30%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V + +       
Sbjct: 158 KKVLLGLSGGVDSSVVGVLLQKAIGDQLTCIFVDHGLLRKGE---AEQVMESLGGKFG-- 212

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      L I+   +       +A                  +F   A  LA   G
Sbjct: 213 -----------LNIIKVDAKERFLSKLAGVSDPEQKRKIIGNEFVYVFDDEATKLAGEEG 261

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           ++ +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 262 VSFLAQGTLYTDVIESGTETAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRALGTEL 321

Query: 188 GGQDLV 193
           G  D +
Sbjct: 322 GMPDAI 327


>gi|256960703|ref|ZP_05564874.1| GMP synthase [Enterococcus faecalis Merz96]
 gi|293384761|ref|ZP_06630613.1| GMP synthase [Enterococcus faecalis R712]
 gi|293388022|ref|ZP_06632552.1| GMP synthase [Enterococcus faecalis S613]
 gi|312908689|ref|ZP_07767630.1| GMP synthase protein [Enterococcus faecalis DAPTO 512]
 gi|312909163|ref|ZP_07768021.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Enterococcus faecalis DAPTO 516]
 gi|256951199|gb|EEU67831.1| GMP synthase [Enterococcus faecalis Merz96]
 gi|291077938|gb|EFE15302.1| GMP synthase [Enterococcus faecalis R712]
 gi|291082580|gb|EFE19543.1| GMP synthase [Enterococcus faecalis S613]
 gi|310625370|gb|EFQ08653.1| GMP synthase protein [Enterococcus faecalis DAPTO 512]
 gi|311290505|gb|EFQ69061.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Enterococcus faecalis DAPTO 516]
          Length = 520

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 56/186 (30%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V + +       
Sbjct: 223 KKVLLGLSGGVDSSVVGVLLQKAIGDQLTCIFVDHGLLRKGE---AEQVMESLGGKFG-- 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      L I+   +       +A                  +F   A  LA   G
Sbjct: 278 -----------LNIIKVDAKERFLSKLAGVSDPEQKRKIIGNEFVYVFDDEATKLAGEEG 326

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           ++ +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 327 VSFLAQGTLYTDVIESGTETAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRALGTEL 386

Query: 188 GGQDLV 193
           G  D +
Sbjct: 387 GMPDAI 392


>gi|253730977|ref|ZP_04865142.1| cell cycle control ATP-binding protein MesJ [Staphylococcus aureus
           subsp. aureus USA300_TCH959]
 gi|253725289|gb|EES94018.1| cell cycle control ATP-binding protein MesJ [Staphylococcus aureus
           subsp. aureus USA300_TCH959]
          Length = 431

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 57/188 (30%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++  S G DS   L   L+ +      +  L  ++G R+    E              ++
Sbjct: 15  VVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEEA-------------RF 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            ++  E H + L I       SL +N +++ +       +      +        A+ L 
Sbjct: 62  LEAYCERHHIDLHIKKLDLSHSLDRNNSIQNEARIKRYEWFDEMMNVLEADVLLTAHHLD 121

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    + +   Y      + R       L       ++ PL+ + K E  +  +  
Sbjct: 122 --------DQLETIMYRIFNGKSTRNKLGFDELSKRKGYQIYRPLLAVSKKEIKQFQERY 173

Query: 188 GGQDLVNL 195
                 + 
Sbjct: 174 HIPYFEDE 181


>gi|300861889|ref|ZP_07107969.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Enterococcus faecalis TUSoD Ef11]
 gi|300848414|gb|EFK76171.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Enterococcus faecalis TUSoD Ef11]
          Length = 520

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 56/186 (30%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V + +       
Sbjct: 223 KKVLLGLSGGVDSSVVGVLLQKAIGDQLTCIFVDHGLLRKGE---AEQVMESLGGKFG-- 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      L I+   +       +A                  +F   A  LA   G
Sbjct: 278 -----------LNIIKVDAKERFLSKLAGVSDPEQKRKIIGNEFVYVFDDEATKLAGEEG 326

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           ++ +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 327 VSFLAQGTLYTDVIESGTETAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRALGTEL 386

Query: 188 GGQDLV 193
           G  D +
Sbjct: 387 GMPDAI 392


>gi|229550585|ref|ZP_04439310.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Enterococcus faecalis ATCC 29200]
 gi|229304304|gb|EEN70300.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Enterococcus faecalis ATCC 29200]
          Length = 520

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 56/186 (30%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V + +       
Sbjct: 223 KKVLLGLSGGVDSSVVGVLLQKAIGDQLTCIFVDHGLLRKGE---AEQVMESLGGKFG-- 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      L I+   +       +A                  +F   A  LA   G
Sbjct: 278 -----------LNIIKVDAKERFLSKLAGVSDPEQKRKIIGNEFVYVFDDEATKLAGEEG 326

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           ++ +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 327 VSFLAQGTLYTDVIESGTETAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRALGTEL 386

Query: 188 GGQDLV 193
           G  D +
Sbjct: 387 GMPDAI 392


>gi|257792080|ref|YP_003182686.1| argininosuccinate synthase [Eggerthella lenta DSM 2243]
 gi|325831706|ref|ZP_08164923.1| argininosuccinate synthase [Eggerthella sp. HGA1]
 gi|257475977|gb|ACV56297.1| argininosuccinate synthase [Eggerthella lenta DSM 2243]
 gi|325486577|gb|EGC89026.1| argininosuccinate synthase [Eggerthella sp. HGA1]
          Length = 464

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 8  APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
             A+L +SGG D+S C+ W  +     V  +  D GQ ++   + +    K
Sbjct: 12 KDKAVLAYSGGLDTSVCIKWLQEEKNLDVIAVVGDVGQEHEGLEKIKQKALK 63


>gi|29374817|ref|NP_813969.1| GMP synthase [Enterococcus faecalis V583]
 gi|227519958|ref|ZP_03950007.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Enterococcus faecalis TX0104]
 gi|227555820|ref|ZP_03985867.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Enterococcus faecalis HH22]
 gi|229547002|ref|ZP_04435727.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Enterococcus faecalis TX1322]
 gi|255971671|ref|ZP_05422257.1| GMP synthase [Enterococcus faecalis T1]
 gi|255974676|ref|ZP_05425262.1| GMP synthase [Enterococcus faecalis T2]
 gi|256618415|ref|ZP_05475261.1| GMP synthase [Enterococcus faecalis ATCC 4200]
 gi|256761969|ref|ZP_05502549.1| GMP synthase [Enterococcus faecalis T3]
 gi|256956895|ref|ZP_05561066.1| GMP synthase [Enterococcus faecalis DS5]
 gi|256964099|ref|ZP_05568270.1| GMP synthase [Enterococcus faecalis HIP11704]
 gi|257078566|ref|ZP_05572927.1| GMP synthase [Enterococcus faecalis JH1]
 gi|257081462|ref|ZP_05575823.1| GMP synthase [Enterococcus faecalis E1Sol]
 gi|257084112|ref|ZP_05578473.1| GMP synthase [Enterococcus faecalis Fly1]
 gi|257087939|ref|ZP_05582300.1| GMP synthase [Enterococcus faecalis D6]
 gi|257088617|ref|ZP_05582978.1| GMP synthase [Enterococcus faecalis CH188]
 gi|257417542|ref|ZP_05594536.1| GMP synthase [Enterococcus faecalis AR01/DG]
 gi|257418732|ref|ZP_05595726.1| GMP synthase [Enterococcus faecalis T11]
 gi|294781523|ref|ZP_06746861.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Enterococcus faecalis PC1.1]
 gi|307269051|ref|ZP_07550413.1| GMP synthase protein [Enterococcus faecalis TX4248]
 gi|307274136|ref|ZP_07555344.1| GMP synthase protein [Enterococcus faecalis TX0855]
 gi|307276360|ref|ZP_07557485.1| GMP synthase protein [Enterococcus faecalis TX2134]
 gi|307278570|ref|ZP_07559641.1| GMP synthase protein [Enterococcus faecalis TX0860]
 gi|307287053|ref|ZP_07567126.1| GMP synthase protein [Enterococcus faecalis TX0109]
 gi|312901158|ref|ZP_07760445.1| GMP synthase protein [Enterococcus faecalis TX0470]
 gi|312903895|ref|ZP_07763066.1| GMP synthase protein [Enterococcus faecalis TX0635]
 gi|312952567|ref|ZP_07771432.1| GMP synthase protein [Enterococcus faecalis TX0102]
 gi|44887950|sp|Q839J8|GUAA_ENTFA RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|29342275|gb|AAO80041.1| GMP synthase [Enterococcus faecalis V583]
 gi|227072506|gb|EEI10469.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Enterococcus faecalis TX0104]
 gi|227174987|gb|EEI55959.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Enterococcus faecalis HH22]
 gi|229307930|gb|EEN73917.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Enterococcus faecalis TX1322]
 gi|237512927|gb|AAL27449.2| GuaA [Enterococcus faecalis]
 gi|255962689|gb|EET95165.1| GMP synthase [Enterococcus faecalis T1]
 gi|255967548|gb|EET98170.1| GMP synthase [Enterococcus faecalis T2]
 gi|256597942|gb|EEU17118.1| GMP synthase [Enterococcus faecalis ATCC 4200]
 gi|256683220|gb|EEU22915.1| GMP synthase [Enterococcus faecalis T3]
 gi|256947391|gb|EEU64023.1| GMP synthase [Enterococcus faecalis DS5]
 gi|256954595|gb|EEU71227.1| GMP synthase [Enterococcus faecalis HIP11704]
 gi|256986596|gb|EEU73898.1| GMP synthase [Enterococcus faecalis JH1]
 gi|256989492|gb|EEU76794.1| GMP synthase [Enterococcus faecalis E1Sol]
 gi|256992142|gb|EEU79444.1| GMP synthase [Enterococcus faecalis Fly1]
 gi|256995969|gb|EEU83271.1| GMP synthase [Enterococcus faecalis D6]
 gi|256997429|gb|EEU83949.1| GMP synthase [Enterococcus faecalis CH188]
 gi|257159370|gb|EEU89330.1| GMP synthase [Enterococcus faecalis ARO1/DG]
 gi|257160560|gb|EEU90520.1| GMP synthase [Enterococcus faecalis T11]
 gi|294451380|gb|EFG19844.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Enterococcus faecalis PC1.1]
 gi|306501832|gb|EFM71122.1| GMP synthase protein [Enterococcus faecalis TX0109]
 gi|306504736|gb|EFM73935.1| GMP synthase protein [Enterococcus faecalis TX0860]
 gi|306506965|gb|EFM76110.1| GMP synthase protein [Enterococcus faecalis TX2134]
 gi|306509098|gb|EFM78160.1| GMP synthase protein [Enterococcus faecalis TX0855]
 gi|306514621|gb|EFM83174.1| GMP synthase protein [Enterococcus faecalis TX4248]
 gi|310629468|gb|EFQ12751.1| GMP synthase protein [Enterococcus faecalis TX0102]
 gi|310632729|gb|EFQ16012.1| GMP synthase protein [Enterococcus faecalis TX0635]
 gi|311291747|gb|EFQ70303.1| GMP synthase protein [Enterococcus faecalis TX0470]
 gi|315026770|gb|EFT38702.1| GMP synthase protein [Enterococcus faecalis TX2137]
 gi|315031190|gb|EFT43122.1| GMP synthase protein [Enterococcus faecalis TX0017]
 gi|315035975|gb|EFT47907.1| GMP synthase protein [Enterococcus faecalis TX0027]
 gi|315143272|gb|EFT87288.1| GMP synthase protein [Enterococcus faecalis TX2141]
 gi|315147095|gb|EFT91111.1| GMP synthase protein [Enterococcus faecalis TX4244]
 gi|315151188|gb|EFT95204.1| GMP synthase protein [Enterococcus faecalis TX0012]
 gi|315153422|gb|EFT97438.1| GMP synthase protein [Enterococcus faecalis TX0031]
 gi|315156291|gb|EFU00308.1| GMP synthase protein [Enterococcus faecalis TX0043]
 gi|315158571|gb|EFU02588.1| GMP synthase protein [Enterococcus faecalis TX0312]
 gi|315160860|gb|EFU04877.1| GMP synthase protein [Enterococcus faecalis TX0645]
 gi|315165827|gb|EFU09844.1| GMP synthase protein [Enterococcus faecalis TX1302]
 gi|315168180|gb|EFU12197.1| GMP synthase protein [Enterococcus faecalis TX1341]
 gi|315172592|gb|EFU16609.1| GMP synthase protein [Enterococcus faecalis TX1346]
 gi|315573619|gb|EFU85810.1| GMP synthase protein [Enterococcus faecalis TX0309B]
 gi|315579392|gb|EFU91583.1| GMP synthase protein [Enterococcus faecalis TX0630]
 gi|315582033|gb|EFU94224.1| GMP synthase protein [Enterococcus faecalis TX0309A]
 gi|323479384|gb|ADX78823.1| Glutamineamidotransferase [Enterococcus faecalis 62]
 gi|327533968|gb|AEA92802.1| GMP synthase (glutamine-hydrolyzing) [Enterococcus faecalis OG1RF]
          Length = 520

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 56/186 (30%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V + +       
Sbjct: 223 KKVLLGLSGGVDSSVVGVLLQKAIGDQLTCIFVDHGLLRKGE---AEQVMESLGGKFG-- 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      L I+   +       +A                  +F   A  LA   G
Sbjct: 278 -----------LNIIKVDAKERFLSKLAGVSDPEQKRKIIGNEFVYVFDDEATKLAGEEG 326

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           ++ +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 327 VSFLAQGTLYTDVIESGTETAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRALGTEL 386

Query: 188 GGQDLV 193
           G  D +
Sbjct: 387 GMPDAI 392


>gi|297538819|ref|YP_003674588.1| tRNA(Ile)-lysidine synthetase [Methylotenera sp. 301]
 gi|297258166|gb|ADI30011.1| tRNA(Ile)-lysidine synthetase [Methylotenera sp. 301]
          Length = 456

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 17/47 (36%), Gaps = 4/47 (8%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF----DRVETLSFDYG 43
          ++  +K     LL  SGG DS+  L             +  +   +G
Sbjct: 30 LSRYLKPNQHVLLALSGGLDSTVLLHLLAAAKQTIRFELHAMHVHHG 76


>gi|289192958|ref|YP_003458899.1| hypothetical protein MFS40622_1490 [Methanocaldococcus sp.
          FS406-22]
 gi|288939408|gb|ADC70163.1| conserved hypothetical protein [Methanocaldococcus sp. FS406-22]
          Length = 197

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCV--RKKIVELMPKWK 68
          +LFSGG+DSS   +           ++ ++G     E   E    +  + K++ L  K  
Sbjct: 5  VLFSGGKDSSLSAAILKKLGYSPHLITINFGVIPSYELAQETAKILGFKHKVITLDRKIV 64

Query: 69 DSLGEDHI 76
          +   +  I
Sbjct: 65 EKAADMVI 72


>gi|262052536|ref|ZP_06024733.1| hypothetical protein SA930_1957 [Staphylococcus aureus 930918-3]
 gi|282925584|ref|ZP_06333237.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus A9765]
 gi|259159583|gb|EEW44630.1| hypothetical protein SA930_1957 [Staphylococcus aureus 930918-3]
 gi|282592488|gb|EFB97500.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus A9765]
          Length = 431

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 57/188 (30%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++  S G DS   L   L+ +      +  L  ++G R+    E              ++
Sbjct: 15  VVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEEA-------------RF 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            ++  E H + L I       SL +N +++ +       +      +        A+ L 
Sbjct: 62  LEAYCERHHIDLHIKKLDLSHSLDRNNSIQNEARIKRYEWFDEMMNVLEADVLLTAHHLD 121

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    + +   Y      + R       L       ++ PL+ + K E  +  +  
Sbjct: 122 --------DQLETIMYRIFNGKSTRNKLGFDELSKRKGYQIYRPLLAVSKKEIKQFQERY 173

Query: 188 GGQDLVNL 195
                 + 
Sbjct: 174 HIPYFEDE 181


>gi|254779599|ref|YP_003057705.1| GMP synthase [Helicobacter pylori B38]
 gi|254001511|emb|CAX29529.1| GMP synthase [glutamine-hydrolyzing] (Glutamine amidotransferase)
           (GMP synthetase) [Helicobacter pylori B38]
          Length = 508

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 55/182 (30%), Gaps = 20/182 (10%)

Query: 10  SALLLFSGGQDSS---TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             L   SGG DS+   T L  A+   D +  +  D+G   K E E    + K +     +
Sbjct: 211 KVLCAVSGGVDSTVVATLLYRAIK--DNLIAVFVDHGLLRKNEKERVQAMFKDL-----Q 263

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +  +   + L+ L  +S   L + +            F        L        ++
Sbjct: 264 IPLNTIDAKGIFLSKLKGVSEPELKRKII----GETFIEVFEKEAKKHHLKG------KI 313

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                     +   S         I+       L       +  PL  L K E   L ++
Sbjct: 314 EFLAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEVRLLGKE 373

Query: 187 IG 188
           +G
Sbjct: 374 LG 375


>gi|253735244|ref|ZP_04869409.1| cell cycle control ATP-binding protein MesJ [Staphylococcus aureus
           subsp. aureus TCH130]
 gi|253726804|gb|EES95533.1| cell cycle control ATP-binding protein MesJ [Staphylococcus aureus
           subsp. aureus TCH130]
          Length = 431

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 57/188 (30%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++  S G DS   L   L+ +      +  L  ++G R+    E              ++
Sbjct: 15  VVAVSTGIDSMCLLYQLLNDYKDNYRKLTCLHVNHGVRSASIEEA-------------RF 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            ++  E H + L I       SL +N +++ +       +      +        A+ L 
Sbjct: 62  LEAYCERHHIDLHIKKLDLSHSLDRNNSIQNEARIKRYEWFDEMMNVLEADVLLTAHHLD 121

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    + +   Y      + R       L       ++ PL+ + K E  +  +  
Sbjct: 122 --------DQLETIMYRIFNGKSTRNKLGFDELSKRKGYQIYRPLLAVSKKEIKQFQERY 173

Query: 188 GGQDLVNL 195
                 + 
Sbjct: 174 HIPYFEDE 181


>gi|240950405|ref|ZP_04754659.1| sulfate adenylyltransferase subunit 2 [Actinobacillus minor NM305]
 gi|240295072|gb|EER45922.1| sulfate adenylyltransferase subunit 2 [Actinobacillus minor NM305]
          Length = 308

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 48/182 (26%), Gaps = 18/182 (9%)

Query: 13  LLFSGGQDSSTCLSWALD----RFDRVE----TLSFDYGQRNKVELECRLCVRKKIVELM 64
           LLFSGG+DS   L+ A          +      +  D G      ++ R    +K+    
Sbjct: 35  LLFSGGKDSVVLLALARKAFQLEGRELVLPFPLVHIDTGHNYPEVIQFRDEQVRKLNA-- 92

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L   H+      G +     T +         L      G + +          
Sbjct: 93  -----KLVVGHVEDSIEKGTVVLRKETDSRNAAQAVTLLETIEANGFDALMGGARRDEEK 147

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                 I     E         R +        ++ G    V    P+    + + W+  
Sbjct: 148 ARAKERIFSFRDEFGQWDPKAQRPELWSLYNAKLHKGENMRV---FPISNWTELDIWQYI 204

Query: 185 QD 186
           + 
Sbjct: 205 ER 206


>gi|254458943|ref|ZP_05072366.1| argininosuccinate synthase [Campylobacterales bacterium GD 1]
 gi|207084214|gb|EDZ61503.1| argininosuccinate synthase [Campylobacterales bacterium GD 1]
          Length = 412

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCV 56
          + K+    +L +SGG D+S  L W  D +   V T + D GQ  +VE   +  +
Sbjct: 1  MKKEVKKVVLAYSGGLDTSIILKWLQDEYNAEVITFTADLGQGEEVEPARQKAL 54


>gi|57651385|ref|YP_185441.1| hypothetical protein SACOL0553 [Staphylococcus aureus subsp. aureus
           COL]
 gi|87161906|ref|YP_493196.1| hypothetical protein SAUSA300_0487 [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88194269|ref|YP_499061.1| hypothetical protein SAOUHSC_00484 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|151220683|ref|YP_001331505.1| hypothetical protein NWMN_0471 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|161508749|ref|YP_001574408.1| hypothetical protein USA300HOU_0503 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|221142299|ref|ZP_03566792.1| hypothetical protein SauraJ_11802 [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|258452810|ref|ZP_05700805.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus A5948]
 gi|262049994|ref|ZP_06022853.1| hypothetical protein SAD30_0222 [Staphylococcus aureus D30]
 gi|294850369|ref|ZP_06791102.1| cell cycle protein MesJ [Staphylococcus aureus A9754]
 gi|304380527|ref|ZP_07363203.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           [Staphylococcus aureus subsp. aureus ATCC BAA-39]
 gi|61216391|sp|Q5HIG6|TILS_STAAC RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|57285571|gb|AAW37665.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus subsp. aureus
           COL]
 gi|87127880|gb|ABD22394.1| MesJ/Ycf62 family protein [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87201827|gb|ABD29637.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|150373483|dbj|BAF66743.1| isoleusyl-tRNA-2-lysl-cytidine synthase [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|160367558|gb|ABX28529.1| cell cycle control ATP-binding protein MesJ [Staphylococcus aureus
           subsp. aureus USA300_TCH1516]
 gi|257859496|gb|EEV82349.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus A5948]
 gi|259161929|gb|EEW46512.1| hypothetical protein SAD30_0222 [Staphylococcus aureus D30]
 gi|269940080|emb|CBI48456.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
           TW20]
 gi|294822793|gb|EFG39229.1| cell cycle protein MesJ [Staphylococcus aureus A9754]
 gi|302750400|gb|ADL64577.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus subsp. aureus
           str. JKD6008]
 gi|304340931|gb|EFM06855.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           [Staphylococcus aureus subsp. aureus ATCC BAA-39]
 gi|315196192|gb|EFU26548.1| cell cycle control ATP-binding protein MesJ [Staphylococcus aureus
           subsp. aureus CGS01]
 gi|320139404|gb|EFW31282.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320144181|gb|EFW35949.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329313228|gb|AEB87641.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329729763|gb|EGG66160.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus subsp. aureus
           21189]
          Length = 431

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 57/188 (30%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++  S G DS   L   L+ +      +  L  ++G R+    E              ++
Sbjct: 15  VVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEEA-------------RF 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            ++  E H + L I       SL +N +++ +       +      +        A+ L 
Sbjct: 62  LEAYCERHHIDLHIKKLDLSHSLDRNNSIQNEARIKRYEWFDEMMNVLEADVLLTAHHLD 121

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    + +   Y      + R       L       ++ PL+ + K E  +  +  
Sbjct: 122 --------DQLETIMYRIFNGKSTRNKLGFDELSKRKGYQIYRPLLAVSKKEIKQFQERY 173

Query: 188 GGQDLVNL 195
                 + 
Sbjct: 174 HIPYFEDE 181


>gi|15923499|ref|NP_371033.1| hypothetical protein SAV0509 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15926186|ref|NP_373719.1| hypothetical protein SA0467 [Staphylococcus aureus subsp. aureus
           N315]
 gi|148266968|ref|YP_001245911.1| hypothetical protein SaurJH9_0531 [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150393014|ref|YP_001315689.1| hypothetical protein SaurJH1_0544 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|156978837|ref|YP_001441096.1| hypothetical protein SAHV_0506 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253315222|ref|ZP_04838435.1| hypothetical protein SauraC_03485 [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|255005302|ref|ZP_05143903.2| hypothetical protein SauraM_02505 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257794250|ref|ZP_05643229.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus A9781]
 gi|258407233|ref|ZP_05680378.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus A9763]
 gi|258420800|ref|ZP_05683736.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus A9719]
 gi|258429626|ref|ZP_05688300.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus A9299]
 gi|258446104|ref|ZP_05694265.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus A6300]
 gi|258448012|ref|ZP_05696142.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus A6224]
 gi|258453842|ref|ZP_05701815.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus A5937]
 gi|269202129|ref|YP_003281398.1| hypothetical protein SAAV_0456 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282895117|ref|ZP_06303337.1| cell cycle protein MesJ [Staphylococcus aureus A8117]
 gi|295407399|ref|ZP_06817196.1| cell cycle protein MesJ [Staphylococcus aureus A8819]
 gi|296276162|ref|ZP_06858669.1| hypothetical protein SauraMR_07424 [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297246479|ref|ZP_06930319.1| cell cycle protein MesJ [Staphylococcus aureus A8796]
 gi|61216721|sp|Q99W94|TILS_STAAM RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|61217307|sp|Q7A7A6|TILS_STAAN RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|13700399|dbj|BAB41697.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           N315]
 gi|14246277|dbj|BAB56671.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|147740037|gb|ABQ48335.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus subsp. aureus
           JH9]
 gi|149945466|gb|ABR51402.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus subsp. aureus
           JH1]
 gi|156720972|dbj|BAF77389.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|257788222|gb|EEV26562.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus A9781]
 gi|257841191|gb|EEV65640.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus A9763]
 gi|257843192|gb|EEV67605.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus A9719]
 gi|257849685|gb|EEV73652.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus A9299]
 gi|257855081|gb|EEV78023.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus A6300]
 gi|257858702|gb|EEV81575.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus A6224]
 gi|257864013|gb|EEV86768.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus A5937]
 gi|262074419|gb|ACY10392.1| hypothetical protein SAAV_0456 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282762535|gb|EFC02675.1| cell cycle protein MesJ [Staphylococcus aureus A8117]
 gi|285816208|gb|ADC36695.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus 04-02981]
 gi|294967756|gb|EFG43788.1| cell cycle protein MesJ [Staphylococcus aureus A8819]
 gi|297176666|gb|EFH35928.1| cell cycle protein MesJ [Staphylococcus aureus A8796]
 gi|312829004|emb|CBX33846.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315128637|gb|EFT84640.1| hypothetical protein CGSSa03_01650 [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|329725061|gb|EGG61556.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus subsp. aureus
           21172]
          Length = 431

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 57/188 (30%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++  S G DS   L   L+ +      +  L  ++G R+    E              ++
Sbjct: 15  VVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEEA-------------RF 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            ++  E H + L I       SL +N +++ +       +      +        A+ L 
Sbjct: 62  LEAYCERHHIDLHIKKLDLSHSLDRNNSIQNEARIKRYEWFDEMMNVLEADVLLTAHHLD 121

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    + +   Y      + R       L       ++ PL+ + K E  +  +  
Sbjct: 122 --------DQLETIMYRIFNGKSTRNKLGFDELSKRKGYQIYRPLLAVSKKEIKQFQERY 173

Query: 188 GGQDLVNL 195
                 + 
Sbjct: 174 HIPYFEDE 181


>gi|313238558|emb|CBY13608.1| unnamed protein product [Oikopleura dioica]
          Length = 1010

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 21/44 (47%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE 49
           K   + +L +SGG D+S  L + + +  RV     D GQ    E
Sbjct: 609 KMPETVVLAYSGGLDTSCILVYLVKQGYRVVACIADVGQDEDFE 652


>gi|323342676|ref|ZP_08082908.1| GMP synthase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463788|gb|EFY08982.1| GMP synthase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 510

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 49/185 (26%), Gaps = 20/185 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DS+   +       D++  +  D+G   K E      V +   +    
Sbjct: 215 NEHVICALSGGVDSAVVAALLHHAIGDQLTCIFVDHGLLRKGE---ADSVVEVFQDHFKM 271

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +       L  L  +      + +          +     R               
Sbjct: 272 NLIKVDAQRRF-LDKLAGVDDPEKKRKIIGNEFIYVFEDETKKLR--------------- 315

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G   TD          TI++      L  +    +  PL  L K E  KL   
Sbjct: 316 DAKWLAQGTLYTDVIESGTKTAQTIKSHHNVGGLPEDMDFKLIEPLDTLFKDEVRKLGLV 375

Query: 187 IGGQD 191
           +G  +
Sbjct: 376 LGLPE 380


>gi|319900441|ref|YP_004160169.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides helcogenes P 36-108]
 gi|319415472|gb|ADV42583.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides helcogenes P 36-108]
          Length = 353

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/178 (11%), Positives = 36/178 (20%), Gaps = 11/178 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +K     LL  SGG DSS       +    V  ++F                 + + +  
Sbjct: 1   MKSKEHVLLGMSGGTDSSVAAMRLQEAGYEVTGVTFR--------FYEADGGTEYLEDAR 52

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                                       +  +  +                L   A +A 
Sbjct: 53  ALAARLGIGHITYDAREAFRERVIRYFIDEYLAGRTPVPCTVCNNELKWALL---AKIAD 109

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
             GI  +  G                    +   +  +          M L   +  K
Sbjct: 110 EKGIYWVSTGHYVRKVLQEGKYYIAPAADRDKDQSFFLWGLKQDILRRMLLPMGDIIK 167


>gi|319399666|gb|EFV87920.1| tRNA(Ile)-lysidine synthetase [Staphylococcus epidermidis FRI909]
          Length = 431

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 53/184 (28%), Gaps = 27/184 (14%)

Query: 8   APSA--LLLFSGGQDSSTCLSWALDR----FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           +  A  ++  S G DS + L   L+     + ++  +  ++G R +   E      ++  
Sbjct: 9   SKKAHIVVAVSTGIDSMSLLYSLLNDYQHTYRKLTCVHVNHGLREQSYEEEA--FLREYC 66

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +              L L+ +    +S   +    + +     +     R  + L     
Sbjct: 67  QQHHI----DIYIKRLDLSDIVADGNSIQQEARQRRYE--WFGDIISQLRADVLLTAH-- 118

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
                          + +   Y      + R           +   V+ P++ LKK E  
Sbjct: 119 -----------HLDDQLETIIYRLFTGRSTRNSLGMTYESYFNQYKVYRPMLNLKKTEIL 167

Query: 182 KLAQ 185
               
Sbjct: 168 AYQH 171


>gi|213514834|ref|NP_001134536.1| Argininosuccinate synthase [Salmo salar]
 gi|209734100|gb|ACI67919.1| Argininosuccinate synthase [Salmo salar]
          Length = 412

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 24/57 (42%), Gaps = 3/57 (5%)

Query: 7  KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +   ++L +SGG D+S  L W  +    V T   + GQ  + + +      + +  
Sbjct: 1  MSKGTVVLAYSGGLDTSCILVWLKEEGYDVITYLANIGQ--EEDFDAAKKKAESLGA 55


>gi|58617112|ref|YP_196311.1| argininosuccinate synthase [Ehrlichia ruminantium str. Gardel]
 gi|81311344|sp|Q5FH27|ASSY_EHRRG RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|58416724|emb|CAI27837.1| Argininosuccinate synthase [Ehrlichia ruminantium str. Gardel]
          Length = 394

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 49/154 (31%), Gaps = 9/154 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM-PK 66
              +L +SGG D+S  L W  + +   V   + D GQ + + +  +      + E+    
Sbjct: 2   KKIVLAYSGGLDTSVILKWLQENYNCEVVVFTADIGQEDDMSVIQKKAAALNVKEIFIED 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            K+    D + P+         + T      +   ++    +  R I         A   
Sbjct: 62  LKEEFVRDFVFPM-------FRANTIYEGYYLLGTSIARPLIAKRQIEIAHLTGADAVAH 114

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           G T         ++  Y    +  + A      L
Sbjct: 115 GATGKGNDQVRFEFGYYCCDPNIKVIAPWRQWEL 148


>gi|57239106|ref|YP_180242.1| argininosuccinate synthase [Ehrlichia ruminantium str. Welgevonden]
 gi|58579053|ref|YP_197265.1| argininosuccinate synthase [Ehrlichia ruminantium str. Welgevonden]
 gi|81819253|sp|Q5HBF2|ASSY_EHRRW RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|57161185|emb|CAH58099.1| argininosuccinate synthase [Ehrlichia ruminantium str. Welgevonden]
 gi|58417679|emb|CAI26883.1| Argininosuccinate synthase [Ehrlichia ruminantium str. Welgevonden]
          Length = 394

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 49/154 (31%), Gaps = 9/154 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM-PK 66
              +L +SGG D+S  L W  + +   V   + D GQ + + +  +      + E+    
Sbjct: 2   KKIVLAYSGGLDTSVILKWLQENYNCEVVVFTADIGQEDDMSVIQKKAAALNVKEIFIED 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            K+    D + P+         + T      +   ++    +  R I         A   
Sbjct: 62  LKEEFVRDFVFPM-------FRANTIYEGYYLLGTSIARPLIAKRQIEIAHLTGADAVAH 114

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           G T         ++  Y    +  + A      L
Sbjct: 115 GATGKGNDQVRFEFGYYCCDPNIKVIAPWRQWEL 148


>gi|15615749|ref|NP_244053.1| argininosuccinate synthase [Bacillus halodurans C-125]
 gi|20137501|sp|Q9K820|ASSY_BACHD RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|10175810|dbj|BAB06906.1| argininosuccinate synthase (citrulline-asparate ligase) [Bacillus
          halodurans C-125]
          Length = 409

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 2/56 (3%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
              +L +SGG D+S  + W  D+   V  +  D G     +LE       K+  +
Sbjct: 3  KKKVVLAYSGGLDTSVAIKWLSDKGYDVIAVGLDVG--EGKDLEFVKEKALKVGAI 56


>gi|324324271|gb|ADY19531.1| GMP synthase [Bacillus thuringiensis serovar finitimus YBT-020]
          Length = 512

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 53/186 (28%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 218 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFHMN 274

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G                ++      + G   I++          G
Sbjct: 275 VIKVDAKERFMNKLKG---------------VEDPEQKRKIIGNEFIYVFDDEAS-KLEG 318

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 319 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 378

Query: 188 GGQDLV 193
           G  D +
Sbjct: 379 GIPDEI 384


>gi|270293669|ref|ZP_06199871.1| tRNA methyl transferase [Bacteroides sp. D20]
 gi|270275136|gb|EFA20996.1| tRNA methyl transferase [Bacteroides sp. D20]
          Length = 366

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/181 (12%), Positives = 48/181 (26%), Gaps = 7/181 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +L SGG DSS  +    ++  R        G+ +   ++C     + +       +    
Sbjct: 17  VLLSGGVDSSVVVHLLCEQGYRPSLFYIKIGRDDADYMDCS--AEEDMEMASAIARRYGL 74

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
              ++ L    +         +    +        +  + I F  F   +     +T   
Sbjct: 75  SLEVVDLH--REYWDQVAAYAIDKIRRGLTPNPDVMCNKLIKFGCFEQRVGKDFDVTATG 132

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW---LKKYETWKLAQDIGG 189
                    G            +    L    ++ V   +     L K E   +A   G 
Sbjct: 133 HYATTVLRDGKTWLGTAADSVKDQTDFLAQIDYLQVSKLMFPLGRLMKNEVRDIALRAGL 192

Query: 190 Q 190
            
Sbjct: 193 P 193


>gi|302882329|ref|XP_003040075.1| hypothetical protein NECHADRAFT_64031 [Nectria haematococca mpVI
           77-13-4]
 gi|256720942|gb|EEU34362.1| hypothetical protein NECHADRAFT_64031 [Nectria haematococca mpVI
           77-13-4]
          Length = 542

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 56/188 (29%), Gaps = 6/188 (3%)

Query: 9   PSALLL--FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           P AL++   SGG DS+   +   +   DR   +  + G     E E    V+K + + + 
Sbjct: 230 PKALVIGGVSGGVDSTVGATLMREAIGDRFHAIGVNNGCMRLNEFE---EVKKNLRDHLG 286

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                +    +    + G        K +     D          +       +  + + 
Sbjct: 287 INLHVVEAGELFLGRLAGVTDPEKKRKIIGSTFIDVFEQEAIRIEKEAENTPNSGRVEWF 346

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           L  T     +    + G                 +     + +  PL  L K E   + +
Sbjct: 347 LQGTLYPDVIESLSWRGPSATIKTHHNVGGLPERMMKGQGLRLIEPLRLLFKDEVRAIGR 406

Query: 186 DIGGQDLV 193
            +G  + +
Sbjct: 407 QLGIHESL 414


>gi|237784943|ref|YP_002905648.1| GMP synthase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237757855|gb|ACR17105.1| GMP synthase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 524

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 49/182 (26%), Gaps = 12/182 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+   +       DR+  +  D+G   K E E          + +    
Sbjct: 222 RAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRKGEREQVE------NDFVASTG 275

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +L     +        +   +T     +    N             L            
Sbjct: 276 ANLV---TVDETDAFLSALKGVTDPEKKRKAIGNEFIRSFERAVAGVLSD--APEGARVD 330

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +   T+  PL  L K E   + +++G
Sbjct: 331 FLVQGTLYPDVVESGGGSGTANIKSHHNVGGLPDDVEFTLVEPLRLLFKDEVRAVGRELG 390

Query: 189 GQ 190
             
Sbjct: 391 LP 392


>gi|228983515|ref|ZP_04143723.1| GMP synthase, large subunit [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228776222|gb|EEM24580.1| GMP synthase, large subunit [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 515

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 53/186 (28%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 221 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFHMN 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G                ++      + G   I++          G
Sbjct: 278 VIKVDAKERFMNKLKG---------------VEDPEQKRKIIGNEFIYVFDDEAS-KLEG 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 322 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 381

Query: 188 GGQDLV 193
           G  D +
Sbjct: 382 GIPDEI 387


>gi|229119924|ref|ZP_04249181.1| GMP synthase, large subunit [Bacillus cereus 95/8201]
 gi|228663538|gb|EEL19121.1| GMP synthase, large subunit [Bacillus cereus 95/8201]
          Length = 515

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 53/186 (28%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 221 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFHMN 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G                ++      + G   I++          G
Sbjct: 278 VIKVDAKERFMNKLKG---------------VEDPEQKRKIIGNEFIYVFDDEAS-KLEG 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 322 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 381

Query: 188 GGQDLV 193
           G  D +
Sbjct: 382 GIPDEI 387


>gi|229194645|ref|ZP_04321441.1| GMP synthase, large subunit [Bacillus cereus m1293]
 gi|228588838|gb|EEK46860.1| GMP synthase, large subunit [Bacillus cereus m1293]
          Length = 515

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 53/186 (28%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 221 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFHMN 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G                ++      + G   I++          G
Sbjct: 278 VIKVDAKERFMNKLKG---------------VEDPEQKRKIIGNEFIYVFDDEAS-KLEG 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 322 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 381

Query: 188 GGQDLV 193
           G  D +
Sbjct: 382 GIPDEI 387


>gi|206978313|ref|ZP_03239189.1| GMP synthase [Bacillus cereus H3081.97]
 gi|217957827|ref|YP_002336371.1| GMP synthase [Bacillus cereus AH187]
 gi|222094026|ref|YP_002528078.1| gmp synthase [Bacillus cereus Q1]
 gi|229137099|ref|ZP_04265721.1| GMP synthase, large subunit [Bacillus cereus BDRD-ST26]
 gi|206743481|gb|EDZ54912.1| GMP synthase [Bacillus cereus H3081.97]
 gi|217066941|gb|ACJ81191.1| GMP synthase [Bacillus cereus AH187]
 gi|221238076|gb|ACM10786.1| GMP synthase [Bacillus cereus Q1]
 gi|228646359|gb|EEL02571.1| GMP synthase, large subunit [Bacillus cereus BDRD-ST26]
          Length = 515

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 53/186 (28%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 221 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFHMN 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G                ++      + G   I++          G
Sbjct: 278 VIKVDAKERFMNKLKG---------------VEDPEQKRKIIGNEFIYVFDDEAS-KLEG 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 322 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 381

Query: 188 GGQDLV 193
           G  D +
Sbjct: 382 GIPDEI 387


>gi|49476755|ref|YP_034594.1| GMP synthase [Bacillus thuringiensis serovar konkukian str. 97-27]
 gi|81397417|sp|Q6HPC6|GUAA_BACHK RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|49328311|gb|AAT58957.1| GMP synthase [Bacillus thuringiensis serovar konkukian str. 97-27]
          Length = 515

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 53/186 (28%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 221 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFHMN 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G                ++      + G   I++          G
Sbjct: 278 VIKVDAKERFMNKLKG---------------VEDPEQKRKIIGNEFIYVFDDEAS-KLEG 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 322 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 381

Query: 188 GGQDLV 193
           G  D +
Sbjct: 382 GIPDEI 387


>gi|42779372|ref|NP_976619.1| GMP synthase [Bacillus cereus ATCC 10987]
 gi|50400359|sp|Q73ER7|GUAA_BACC1 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|42735288|gb|AAS39227.1| GMP synthase [Bacillus cereus ATCC 10987]
          Length = 512

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 53/186 (28%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 218 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFHMN 274

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G                ++      + G   I++          G
Sbjct: 275 VIKVDAKERFMNKLKG---------------VEDPEQKRKIIGNEFIYVFDDEAS-KLEG 318

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 319 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 378

Query: 188 GGQDLV 193
           G  D +
Sbjct: 379 GIPDEI 384


>gi|30260444|ref|NP_842821.1| GMP synthase [Bacillus anthracis str. Ames]
 gi|47777798|ref|YP_016877.2| GMP synthase [Bacillus anthracis str. 'Ames Ancestor']
 gi|167634217|ref|ZP_02392539.1| GMP synthase [Bacillus anthracis str. A0442]
 gi|218901460|ref|YP_002449294.1| GMP synthase [Bacillus cereus AH820]
 gi|254686663|ref|ZP_05150521.1| GMP synthase [Bacillus anthracis str. CNEVA-9066]
 gi|254724731|ref|ZP_05186514.1| GMP synthase [Bacillus anthracis str. A1055]
 gi|254735439|ref|ZP_05193147.1| GMP synthase [Bacillus anthracis str. Western North America
           USA6153]
 gi|254744183|ref|ZP_05201865.1| GMP synthase [Bacillus anthracis str. Kruger B]
 gi|254756031|ref|ZP_05208062.1| GMP synthase [Bacillus anthracis str. Vollum]
 gi|254761681|ref|ZP_05213699.1| GMP synthase [Bacillus anthracis str. Australia 94]
 gi|300119510|ref|ZP_07057062.1| GMP synthase [Bacillus cereus SJ1]
 gi|301051994|ref|YP_003790205.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Bacillus anthracis CI]
 gi|44887948|sp|Q81VE0|GUAA_BACAN RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226738383|sp|B7JM61|GUAA_BACC0 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|30253765|gb|AAP24307.1| GMP synthase [Bacillus anthracis str. Ames]
 gi|47551503|gb|AAT29352.2| GMP synthase [Bacillus anthracis str. 'Ames Ancestor']
 gi|167530531|gb|EDR93246.1| GMP synthase [Bacillus anthracis str. A0442]
 gi|218540109|gb|ACK92507.1| GMP synthase [Bacillus cereus AH820]
 gi|298723100|gb|EFI63990.1| GMP synthase [Bacillus cereus SJ1]
 gi|300374163|gb|ADK03067.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Bacillus cereus biovar anthracis str. CI]
          Length = 512

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 53/186 (28%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 218 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFHMN 274

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G                ++      + G   I++          G
Sbjct: 275 VIKVDAKERFMNKLKG---------------VEDPEQKRKIIGNEFIYVFDDEAS-KLEG 318

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 319 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 378

Query: 188 GGQDLV 193
           G  D +
Sbjct: 379 GIPDEI 384


>gi|77413211|ref|ZP_00789409.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus agalactiae 515]
 gi|77160751|gb|EAO71864.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Streptococcus agalactiae 515]
          Length = 373

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 48/194 (24%), Gaps = 13/194 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D        ++  SGG DSS       ++   V                C     +  
Sbjct: 1   MTD--NSNIRVVVGMSGGVDSSVTALLLKEQGYDVIGXFMKNWDDTDEFGVC--TATEDY 56

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++           + +            + +    + +    PN  V     I      
Sbjct: 57  KDVAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFL 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMW 174
             A  LG   +  G             H    A            L  E       PL  
Sbjct: 114 DYAMTLGADYVATGHYAQVTRDENGIVHMLRGADNNKDQTYFLSQLSQEQLQKTLFPLGH 173

Query: 175 LKKYETWKLAQDIG 188
           L+K E  ++A++ G
Sbjct: 174 LQKPEVRRIAEEAG 187


>gi|47567509|ref|ZP_00238221.1| GMP synthase [Bacillus cereus G9241]
 gi|49183286|ref|YP_026538.1| GMP synthase [Bacillus anthracis str. Sterne]
 gi|52144972|ref|YP_081857.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Bacillus cereus E33L]
 gi|65317699|ref|ZP_00390658.1| COG0519: GMP synthase, PP-ATPase domain/subunit [Bacillus anthracis
           str. A2012]
 gi|118476016|ref|YP_893167.1| GMP synthase [Bacillus thuringiensis str. Al Hakam]
 gi|167640155|ref|ZP_02398422.1| GMP synthase [Bacillus anthracis str. A0193]
 gi|170687797|ref|ZP_02879012.1| GMP synthase [Bacillus anthracis str. A0465]
 gi|170709230|ref|ZP_02899652.1| GMP synthase [Bacillus anthracis str. A0389]
 gi|177655761|ref|ZP_02937036.1| GMP synthase [Bacillus anthracis str. A0174]
 gi|190567444|ref|ZP_03020358.1| GMP synthase [Bacillus anthracis Tsiankovskii-I]
 gi|196036858|ref|ZP_03104246.1| GMP synthase [Bacillus cereus W]
 gi|196041138|ref|ZP_03108434.1| GMP synthase [Bacillus cereus NVH0597-99]
 gi|196046204|ref|ZP_03113431.1| GMP synthase [Bacillus cereus 03BB108]
 gi|225862311|ref|YP_002747689.1| GMP synthase [Bacillus cereus 03BB102]
 gi|227812935|ref|YP_002812944.1| GMP synthase [Bacillus anthracis str. CDC 684]
 gi|228912998|ref|ZP_04076640.1| GMP synthase, large subunit [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228925514|ref|ZP_04088606.1| GMP synthase, large subunit [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228931760|ref|ZP_04094660.1| GMP synthase, large subunit [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228944066|ref|ZP_04106448.1| GMP synthase, large subunit [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|229089392|ref|ZP_04220665.1| GMP synthase, large subunit [Bacillus cereus Rock3-42]
 gi|229154027|ref|ZP_04282155.1| GMP synthase, large subunit [Bacillus cereus ATCC 4342]
 gi|229182657|ref|ZP_04309901.1| GMP synthase, large subunit [Bacillus cereus BGSC 6E1]
 gi|229603516|ref|YP_002864893.1| GMP synthase [Bacillus anthracis str. A0248]
 gi|81689732|sp|Q63GV4|GUAA_BACCZ RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226738382|sp|A0R8W7|GUAA_BACAH RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|254799668|sp|C3PBL1|GUAA_BACAA RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|254799669|sp|C3L508|GUAA_BACAC RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|254800084|sp|C1EUB4|GUAA_BACC3 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|47555911|gb|EAL14250.1| GMP synthase [Bacillus cereus G9241]
 gi|49177213|gb|AAT52589.1| GMP synthase [Bacillus anthracis str. Sterne]
 gi|51978441|gb|AAU19991.1| GMP synthase [Bacillus cereus E33L]
 gi|118415241|gb|ABK83660.1| GMP synthase (glutamine-hydrolyzing) [Bacillus thuringiensis str.
           Al Hakam]
 gi|167511966|gb|EDR87345.1| GMP synthase [Bacillus anthracis str. A0193]
 gi|170125863|gb|EDS94768.1| GMP synthase [Bacillus anthracis str. A0389]
 gi|170668324|gb|EDT19072.1| GMP synthase [Bacillus anthracis str. A0465]
 gi|172079990|gb|EDT65092.1| GMP synthase [Bacillus anthracis str. A0174]
 gi|190561571|gb|EDV15542.1| GMP synthase [Bacillus anthracis Tsiankovskii-I]
 gi|195990540|gb|EDX54520.1| GMP synthase [Bacillus cereus W]
 gi|196022949|gb|EDX61629.1| GMP synthase [Bacillus cereus 03BB108]
 gi|196028073|gb|EDX66684.1| GMP synthase [Bacillus cereus NVH0597-99]
 gi|225787406|gb|ACO27623.1| GMP synthase [Bacillus cereus 03BB102]
 gi|227006016|gb|ACP15759.1| GMP synthase [Bacillus anthracis str. CDC 684]
 gi|228600826|gb|EEK58402.1| GMP synthase, large subunit [Bacillus cereus BGSC 6E1]
 gi|228629447|gb|EEK86146.1| GMP synthase, large subunit [Bacillus cereus ATCC 4342]
 gi|228693941|gb|EEL47631.1| GMP synthase, large subunit [Bacillus cereus Rock3-42]
 gi|228815616|gb|EEM61855.1| GMP synthase, large subunit [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228827909|gb|EEM73643.1| GMP synthase, large subunit [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228834152|gb|EEM79697.1| GMP synthase, large subunit [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228846652|gb|EEM91662.1| GMP synthase, large subunit [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|229267924|gb|ACQ49561.1| GMP synthase [Bacillus anthracis str. A0248]
          Length = 515

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 53/186 (28%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 221 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFHMN 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G                ++      + G   I++          G
Sbjct: 278 VIKVDAKERFMNKLKG---------------VEDPEQKRKIIGNEFIYVFDDEAS-KLEG 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 322 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 381

Query: 188 GGQDLV 193
           G  D +
Sbjct: 382 GIPDEI 387


>gi|238061016|ref|ZP_04605725.1| bifunctional GMP synthase/glutamine amidotransferase
           [Micromonospora sp. ATCC 39149]
 gi|237882827|gb|EEP71655.1| bifunctional GMP synthase/glutamine amidotransferase
           [Micromonospora sp. ATCC 39149]
          Length = 524

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 49/184 (26%), Gaps = 16/184 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DS+   +       D++  +  D+G     E      V K  V      
Sbjct: 225 KEVICGLSGGVDSAVAAALVHRAVGDQLTCVFVDHGLLRAGE---AEQVEKDYVAAT--- 278

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                +  ++  A     + + +T        +            +         A+   
Sbjct: 279 ---GIKLKVVDAADRFLGALAGVTD------PEQKRKIIGREFIRVFEAAAREVAAHGDV 329

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   +               I++      L  +    +  PL  L K E   L  ++
Sbjct: 330 EFLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPEDLKFALVEPLRTLFKDEVRTLGLEL 389

Query: 188 GGQD 191
           G  +
Sbjct: 390 GLPE 393


>gi|225405609|ref|ZP_03760798.1| hypothetical protein CLOSTASPAR_04830 [Clostridium asparagiforme
           DSM 15981]
 gi|225042873|gb|EEG53119.1| hypothetical protein CLOSTASPAR_04830 [Clostridium asparagiforme
           DSM 15981]
          Length = 513

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 44/187 (23%), Gaps = 21/187 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS            ++  +  D+G            +RK   + +    
Sbjct: 217 KVLCALSGGVDSSVAAVMLSKAVGKQLTCVFVDHG-----------LLRKNEGDEVEAVF 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G   +  + +          K      Q               F+      A ++G 
Sbjct: 266 GPNGPYQLNFIRVNAQERFYEKLKGAEEPEQK-------RKIIGEEFIRVFEEEAKKIGA 318

Query: 129 TNIVI--GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +  +   +                                +  PL  L K E  K   +
Sbjct: 319 VDFFVQGTIYPDVIESGLGKSAVIKSHHNVGGLPEHVDFKEIVEPLRLLFKDEVRKAGLE 378

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 379 LGIPGNL 385


>gi|222445963|ref|ZP_03608478.1| hypothetical protein METSMIALI_01611 [Methanobrevibacter smithii
          DSM 2375]
 gi|222435528|gb|EEE42693.1| hypothetical protein METSMIALI_01611 [Methanobrevibacter smithii
          DSM 2375]
          Length = 336

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 21/68 (30%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
          K     + FSGG DS+     A    D+   ++ D        ++      K+       
Sbjct: 15 KNRKIAIAFSGGADSTLLTYLASKVSDKPIAITIDNHIFPTGFIKHCKKTAKEFGIKHKV 74

Query: 67 WKDSLGED 74
             +  E 
Sbjct: 75 IDLNFYEH 82


>gi|194899097|ref|XP_001979099.1| GG10357 [Drosophila erecta]
 gi|190650802|gb|EDV48057.1| GG10357 [Drosophila erecta]
          Length = 419

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            + +L +SGG D+S  L W LD+   V  +  D GQ+   +         KI       
Sbjct: 3  RETVILAYSGGLDTSCILKWLLDKHFEVVCVLADVGQK--EDFTAAEKKALKIGAKKVIL 60

Query: 68 KD 69
           D
Sbjct: 61 AD 62


>gi|161506145|ref|YP_001573257.1| argininosuccinate synthase [Salmonella enterica subsp. arizonae
          serovar 62:z4,z23:-- str. RSK2980]
 gi|189046402|sp|A9MP33|ASSY_SALAR RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|160867492|gb|ABX24115.1| hypothetical protein SARI_04334 [Salmonella enterica subsp.
          arizonae serovar 62:z4,z23:--]
          Length = 449

 Score = 46.1 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + E       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYEAIPRRAMEYGAENARLID 72


>gi|328907390|gb|EGG27156.1| tRNA-specific 2-thiouridylase MnmA [Propionibacterium sp. P08]
          Length = 366

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/89 (12%), Positives = 23/89 (25%), Gaps = 12/89 (13%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS---------FDYGQR---NKVELECRLCVR 57
            L   SGG DS+   +  ++    V  +             G R   +  +        
Sbjct: 2  KVLAAMSGGIDSAVAAARLVEAGHDVTGVHLALSRNPRSHREGSRGCCSLEDSFDARRAA 61

Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDIS 86
           ++      W  S      +    + +  
Sbjct: 62 DRLGIPFYVWDFSDRFAAEVIDPFIAEYQ 90


>gi|315638034|ref|ZP_07893219.1| ThiI family protein [Campylobacter upsaliensis JV21]
 gi|315481882|gb|EFU72501.1| ThiI family protein [Campylobacter upsaliensis JV21]
          Length = 327

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD--YGQRNKVELECRLCVR 57
           AL LFSGG DS   +     +   V+ L+ +  +G R+    E R    
Sbjct: 2  KALALFSGGLDSLLAMKLITQQGIAVKALNINIGFGSRSDKSEEMRRRAA 51


>gi|237751009|ref|ZP_04581489.1| guanosine monophosphate synthetase GuaA [Helicobacter bilis ATCC
            43879]
 gi|229373454|gb|EEO23845.1| guanosine monophosphate synthetase GuaA [Helicobacter bilis ATCC
            43879]
          Length = 1864

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 46/185 (24%), Gaps = 15/185 (8%)

Query: 10   SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              L   SGG DSS   +       + +  +  D G   K E E    + ++         
Sbjct: 1566 KVLCAVSGGVDSSVVATLLYRAIGENLIPVFVDTGLLRKGEREAVEAMFRE--------- 1616

Query: 69   DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +      +     L       +T     +                             G 
Sbjct: 1617 NLKVPLIVADARELFLGRLKGVTDPEKKRKIIGETFIEVFEAEAKKHNTKGEIKFLAQG- 1675

Query: 129  TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                    +   S        TI++      L       +  PL  L K E   L +++G
Sbjct: 1676 ----TLYPDVIESVSVKGPSKTIKSHHNVGGLPEWMKFELIEPLRELFKDEVRALGRELG 1731

Query: 189  GQDLV 193
              + +
Sbjct: 1732 MPESM 1736


>gi|228950789|ref|ZP_04112917.1| GMP synthase, large subunit [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228808876|gb|EEM55367.1| GMP synthase, large subunit [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 515

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 221 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFHMN 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G                ++      + G   I++        + G
Sbjct: 278 VIKVDAKERFMNKLKG---------------VEDPEQKRKIIGNEFIYVFDDEASKLQ-G 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 322 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 381

Query: 188 GGQDLV 193
           G  D +
Sbjct: 382 GIPDEI 387


>gi|229068012|ref|ZP_04201323.1| GMP synthase, large subunit [Bacillus cereus F65185]
 gi|229077613|ref|ZP_04210246.1| GMP synthase, large subunit [Bacillus cereus Rock4-2]
 gi|228705693|gb|EEL58046.1| GMP synthase, large subunit [Bacillus cereus Rock4-2]
 gi|228715115|gb|EEL66979.1| GMP synthase, large subunit [Bacillus cereus F65185]
          Length = 515

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 221 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFHMN 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G                ++      + G   I++        + G
Sbjct: 278 VIKVDAKERFMNKLKG---------------VEDPEQKRKIIGNEFIYVFDDEASKLQ-G 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 322 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 381

Query: 188 GGQDLV 193
           G  D +
Sbjct: 382 GIPDEI 387


>gi|229083547|ref|ZP_04215880.1| GMP synthase, large subunit [Bacillus cereus Rock3-44]
 gi|228699764|gb|EEL52416.1| GMP synthase, large subunit [Bacillus cereus Rock3-44]
          Length = 515

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 221 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFHMN 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G                ++      + G   I++        + G
Sbjct: 278 VIKVDAKERFMNKLKG---------------VEDPEQKRKIIGNEFIYVFDDEASKLQ-G 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 322 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 381

Query: 188 GGQDLV 193
           G  D +
Sbjct: 382 GIPDEI 387


>gi|206972695|ref|ZP_03233634.1| GMP synthase [Bacillus cereus AH1134]
 gi|206732381|gb|EDZ49564.1| GMP synthase [Bacillus cereus AH1134]
          Length = 512

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 218 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFHMN 274

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G                ++      + G   I++        + G
Sbjct: 275 VIKVDAKERFMNKLKG---------------VEDPEQKRKIIGNEFIYVFDDEASKLQ-G 318

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 319 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 378

Query: 188 GGQDLV 193
           G  D +
Sbjct: 379 GIPDEI 384


>gi|15602678|ref|NP_245750.1| argininosuccinate synthase [Pasteurella multocida subsp.
          multocida str. Pm70]
 gi|13431299|sp|P57877|ASSY_PASMU RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|12721119|gb|AAK02897.1| ArgG [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 445

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 23/65 (35%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          + K     + FSGG D+S  L W   +       + + GQ ++ +         +     
Sbjct: 9  LPKGQKVGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYNAIPRKAMEYGAEN 68

Query: 65 PKWKD 69
           +  D
Sbjct: 69 ARLID 73


>gi|332158432|ref|YP_004423711.1| hypothetical protein PNA2_0791 [Pyrococcus sp. NA2]
 gi|331033895|gb|AEC51707.1| hypothetical protein PNA2_0791 [Pyrococcus sp. NA2]
          Length = 217

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 41/138 (29%), Gaps = 4/138 (2%)

Query: 14  LFSGGQDSSTCLSWALDRFDRVETLSFDYG----QRNKVELECRLCVRKKIVELMPKWKD 69
           LFSGG+DSS            V  ++  +G     +   E    L    +++EL     D
Sbjct: 26  LFSGGKDSSLAAWLLNKIGYEVRLVTITFGTLDNWKYARETARILGFEHEVIELPKSILD 85

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E  I        I +        +   +N    +    R+        + A  L   
Sbjct: 86  RAVEMCIQDGKPGRAIQYIHEKALEFVASMENVERVSDGTRRDDRVPFLDLSKARSLEDR 145

Query: 130 NIVIGVCETDYSGYPDCR 147
             V  +      GY   R
Sbjct: 146 FNVAYIRPLLGLGYKTIR 163


>gi|298385395|ref|ZP_06994953.1| phosphoadenosine phosphosulfate reductase [Bacteroides sp. 1_1_14]
 gi|298261536|gb|EFI04402.1| phosphoadenosine phosphosulfate reductase [Bacteroides sp. 1_1_14]
          Length = 301

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 58/191 (30%), Gaps = 10/191 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             ++ FSGG+DS  CL  A +++  D++E +  D G  +    +    V K++   +   
Sbjct: 2   KIIVSFSGGKDSQACLIQATNKYGADKIEAVFCDTGWEHPETYQHISDVCKQLDVKLVVL 61

Query: 68  KDSLGEDHI---LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA- 123
           +     D +   +  +          T  + +K   + + +   P   I  +    +   
Sbjct: 62  RSKKYTDFVDMSIKRSRFPSSQRRFCTSELKIKPMIDYILSLTEPCVIIQGIRAKESEER 121

Query: 124 ----YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
               Y            + +  G            +  +        +V  P+      E
Sbjct: 122 AKLPYECNYFGEYYERIKKNRKGKIVEVWKQDYRRKDVLKWCEHYDASVSRPIFQWSAQE 181

Query: 180 TWKLAQDIGGQ 190
                   G +
Sbjct: 182 VINHILSAGQK 192


>gi|284045062|ref|YP_003395402.1| argininosuccinate synthase [Conexibacter woesei DSM 14684]
 gi|283949283|gb|ADB52027.1| argininosuccinate synthase [Conexibacter woesei DSM 14684]
          Length = 431

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 26/76 (34%), Gaps = 1/76 (1%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LLL+SGG D+S  L W  D +   V  L+ + GQ  +     +   R+          
Sbjct: 31  RVLLLYSGGLDTSVMLKWIQDEYRAEVVCLTVNLGQPGEDYDVIKDKARRIGAIDTHVVD 90

Query: 69  DSLGEDHILPLAILGD 84
                 H      +  
Sbjct: 91  AREVFAHEFIKPAIKA 106


>gi|229015662|ref|ZP_04172648.1| GMP synthase, large subunit [Bacillus cereus AH1273]
 gi|229021854|ref|ZP_04178426.1| GMP synthase, large subunit [Bacillus cereus AH1272]
 gi|228739442|gb|EEL89866.1| GMP synthase, large subunit [Bacillus cereus AH1272]
 gi|228745634|gb|EEL95650.1| GMP synthase, large subunit [Bacillus cereus AH1273]
          Length = 515

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G    +  +    V K   E     
Sbjct: 221 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHG---LLRKDEAEGVMKTFSEGFHMN 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G                ++      + G   I++        + G
Sbjct: 278 VIKVDAKERFMNKLKG---------------VEDPEQKRKIIGNEFIYVFDDEASKLQ-G 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 322 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 381

Query: 188 GGQDLV 193
           G  D +
Sbjct: 382 GIPDEI 387


>gi|149193858|ref|ZP_01870956.1| argininosuccinate synthase [Caminibacter mediatlanticus TB-2]
 gi|149135811|gb|EDM24289.1| argininosuccinate synthase [Caminibacter mediatlanticus TB-2]
          Length = 400

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 57/190 (30%), Gaps = 5/190 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +L +SGG D+S  L W  D++   V T + D GQ  +VE         K+        
Sbjct: 2   KVVLAYSGGLDTSVILKWLQDKYNAEVVTFTADIGQGEEVEE--AREKALKLGVKPENIF 59

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                +  +   +       +        +   ++    +  R I         A   G 
Sbjct: 60  IEDLREEFVRDYVF--PMFRANAIYEGEYLLGTSIARPLIAKRQIEIAKQVGAEAVAHGA 117

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
           T         + + Y       + A     +L     +  +     +   +  K +    
Sbjct: 118 TGKGNDQVRFELAYYALKPDIKVIAPWREWDLNSREKLLAYAQKHGIPIQKHGKKSPYSM 177

Query: 189 GQDLVNLILE 198
             +L+++  E
Sbjct: 178 DANLLHISYE 187


>gi|78044946|ref|YP_361069.1| argininosuccinate synthase [Carboxydothermus hydrogenoformans
          Z-2901]
 gi|119361261|sp|Q3A9W5|ASSY_CARHZ RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|77997061|gb|ABB15960.1| argininosuccinate synthase [Carboxydothermus hydrogenoformans
          Z-2901]
          Length = 401

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 2/84 (2%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM- 64
           A   +L +SGG D+S  + W  +     V  +  D GQ  ++E      ++    ++  
Sbjct: 1  MAEKVVLAYSGGLDTSIIIPWLKENYGYEVIAMVADVGQGEELEPLREKAIKSGAAKIYI 60

Query: 65 PKWKDSLGEDHILPLAILGDISHS 88
             K+    D + P+   G +  +
Sbjct: 61 EDVKEEFVRDFVFPMLKAGAVYEN 84


>gi|42527224|ref|NP_972322.1| GMP synthase [Treponema denticola ATCC 35405]
 gi|50400363|sp|Q73LZ4|GUAA_TREDE RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|41817648|gb|AAS12233.1| GMP synthase [Treponema denticola ATCC 35405]
          Length = 523

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 52/190 (27%), Gaps = 24/190 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K    LL  SGG DSS   +         +  +  D+G   K E +      +       
Sbjct: 227 KDGKVLLALSGGVDSSVLAALLNRAVGKNLTCIFVDHGLMRKNEGDEVEAAFRDTPMNFI 286

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +               LG +   S  +     I +               +      A +
Sbjct: 287 RVNAES--------RFLGKLKGVSDPEKKRKIIGEEF-------------IRVFEEEAEK 325

Query: 126 LG-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-VHTPLMWLKKYETWKL 183
           +G +  +  G    D           I++      L        +  PL  L K E   L
Sbjct: 326 IGTVDFLAQGTIYADVVESGTKGSAVIKSHHNVGGLPDHISFKSLIEPLKTLFKDEIRNL 385

Query: 184 AQDIGGQDLV 193
             ++G  D +
Sbjct: 386 GTELGLPDYL 395


>gi|290473675|ref|YP_003466547.1| TilS, tRNA(Ile)-lysidine synthetase [Xenorhabdus bovienii
          SS-2004]
 gi|289172980|emb|CBJ79751.1| TilS, tRNA(Ile)-lysidine synthetase [Xenorhabdus bovienii
          SS-2004]
          Length = 449

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 21/64 (32%), Gaps = 11/64 (17%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWA-----------LDRFDRVETLSFDYGQRNKVELE 51
          D + +    L+ FSGG DS+  L              +     +  +   +G   K +  
Sbjct: 14 DQLGRHKKVLVGFSGGLDSTVLLHLLVQLRYQSHSGVIRDQIELRAIHIHHGLNPKADKW 73

Query: 52 CRLC 55
             C
Sbjct: 74 VEHC 77


>gi|288553719|ref|YP_003425654.1| argininosuccinate synthase [Bacillus pseudofirmus OF4]
 gi|288544879|gb|ADC48762.1| argininosuccinate synthase [Bacillus pseudofirmus OF4]
          Length = 403

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
              +L +SGG D+S  + W  D+   V  +  D G
Sbjct: 3  KKKVVLAYSGGLDTSVAIKWLSDKGYDVIAVGLDVG 38


>gi|167626941|ref|YP_001677441.1| tRNA-specific 2-thiouridylase MnmA [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|189040504|sp|B0TW32|MNMA_FRAP2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|167596942|gb|ABZ86940.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Francisella philomiragia subsp. philomiragia ATCC
           25017]
          Length = 359

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/138 (11%), Positives = 36/138 (26%), Gaps = 5/138 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +    ++  SGG DSS        +   V  +     + +  +  C     + I +    
Sbjct: 2   QNNKIIVGISGGVDSSVSALLLKQQGYDVTGVFMKNWEEDDTDEFCS--AEQHIADAQAV 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     +           ++ ++   + +    PN  +     I      +  + L
Sbjct: 60  CDSIGIPFKKIN---FAAEYWDNVFEHFLTEYKAGRTPNPDILCNKEIKFKAFLSYVHLL 116

Query: 127 GITNIVIGVCETDYSGYP 144
           G   I  G          
Sbjct: 117 GGDYIATGHYARTKVIDD 134


>gi|160872414|ref|ZP_02062546.1| gmp synthase [glutamine-hydrolyzing] (glutamineamidotransferase)
           (gmp synthetase) (gmps) [Rickettsiella grylli]
 gi|159121213|gb|EDP46551.1| gmp synthase [glutamine-hydrolyzing] (glutamineamidotransferase)
           (gmp synthetase) (gmps) [Rickettsiella grylli]
          Length = 523

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/189 (12%), Positives = 54/189 (28%), Gaps = 21/189 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DS+   +        ++  +  + G          L +  K   +   
Sbjct: 225 KEKVLLALSGGVDSTVLAALLHKAIGKQLLCVFVNTG---------LLRITDKDSTIQAL 275

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D       +  ++    +   +T     +            G   + +  +    ++ 
Sbjct: 276 ADDMQISVVKIDASLRFINTLKGITDPEEKRKA---------IGNLFVEIFESEASKHKD 326

Query: 127 GITNIVIGVCET--DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                   +     + +G    +   I++      L     + +  PL  L K E  +L 
Sbjct: 327 IAWLAQGTIYSDVIESAGTITQKAHAIKSHHNVGGLPDTLKLKLLEPLRELFKDEVCELG 386

Query: 185 QDIGGQDLV 193
            ++G    +
Sbjct: 387 IELGLPPEL 395


>gi|51244755|ref|YP_064639.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Desulfotalea psychrophila LSv54]
 gi|81642722|sp|Q6APU2|GUAA_DESPS RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|50875792|emb|CAG35632.1| probable GMP synthase [glutamine-hydrolyzing] [Desulfotalea
           psychrophila LSv54]
          Length = 516

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 50/182 (27%), Gaps = 18/182 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DSS   +        ++  +  + G     E E  +   K+  +L      
Sbjct: 222 VICALSGGVDSSVVAAMIHKAIGSQLTCVYVNNGLMRIGESEGIIKFFKENTDL------ 275

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                H++ +        S         + D  +    +    I      A         
Sbjct: 276 -----HLIDVD------ASDYFLGKLEGVTDPEVKRQHIGLGFIKIFEEEAHKIDGDVKF 324

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                +               I++      L     +++  PL  L K E  +L  ++G 
Sbjct: 325 LAQGTLYPDVVESVSFRGAAPIKSHHNVGCLPDIMKLSLIEPLRELFKDEVRELGVELGL 384

Query: 190 QD 191
            D
Sbjct: 385 PD 386


>gi|320352192|ref|YP_004193531.1| GMP synthase [Desulfobulbus propionicus DSM 2032]
 gi|320120694|gb|ADW16240.1| GMP synthase (glutamine-hydrolyzing) [Desulfobulbus propionicus DSM
           2032]
          Length = 516

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 49/185 (26%), Gaps = 19/185 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DSS   +       D++  +  + G     E E        ++    +
Sbjct: 220 SDRVICALSGGVDSSVVAALVHRAIGDQLTCIHVNNGLMRTGESES-------VLRFFRE 272

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                  D       L  +   +  +    +I           G   I +  A       
Sbjct: 273 KTSLTVIDVDATEFFLNALDGVADPEEKRKRI-----------GYGFIEIFEAEAKKLGK 321

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                   +               I++      L     + +  PL  L K E  +L  +
Sbjct: 322 VRYLAQGTLYPDVIESVVFRGKAPIKSHHNVGGLPERMQLDLIEPLRELFKDEVRELGLE 381

Query: 187 IGGQD 191
           +G  +
Sbjct: 382 LGLPE 386


>gi|319779353|ref|YP_004130266.1| tRNA(Ile)-lysidine synthetase [Taylorella equigenitalis MCE9]
 gi|317109377|gb|ADU92123.1| tRNA(Ile)-lysidine synthetase [Taylorella equigenitalis MCE9]
          Length = 366

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 23/68 (33%), Gaps = 6/68 (8%)

Query: 13  LLFSGGQDSSTCL----SWALDRFDRVETLSFDYGQRNKVELECRL--CVRKKIVELMPK 66
           + FSGG+DS          A      V  +   +G   + +   +      ++   L+  
Sbjct: 55  IAFSGGKDSVVLAIQSKYIATRYGIEVHLIHVHHGLYAEADEWVQRNLKFAERFGFLIHI 114

Query: 67  WKDSLGED 74
              ++  D
Sbjct: 115 LYVNVPTD 122


>gi|159905179|ref|YP_001548841.1| hypothetical protein MmarC6_0792 [Methanococcus maripaludis C6]
 gi|159886672|gb|ABX01609.1| ExsB family protein [Methanococcus maripaludis C6]
          Length = 195

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 30/72 (41%), Gaps = 4/72 (5%)

Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG----QRNKVELECRLCVRKKIVELMPK 66
          A +LFSGG+DSS       +    ++ ++ ++G     R+  E    +    K+  +  +
Sbjct: 3  AHVLFSGGKDSSLSAIILHNLGYEIQLVTVNFGVLDSYRHAEETAKIIGYPHKVESIDKE 62

Query: 67 WKDSLGEDHILP 78
            +   +  +  
Sbjct: 63 LIEKSVDMILKD 74


>gi|52081229|ref|YP_080020.1| tRNA-specific 2-thiouridylase MnmA [Bacillus licheniformis ATCC
           14580]
 gi|52786609|ref|YP_092438.1| tRNA-specific 2-thiouridylase MnmA [Bacillus licheniformis ATCC
           14580]
 gi|319644804|ref|ZP_07999037.1| tRNA-specific 2-thiouridylase mnmA [Bacillus sp. BT1B_CT2]
 gi|73919897|sp|Q65GR9|MNMA_BACLD RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|52004440|gb|AAU24382.1| tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Bacillus licheniformis ATCC 14580]
 gi|52349111|gb|AAU41745.1| TrmU [Bacillus licheniformis ATCC 14580]
 gi|317392613|gb|EFV73407.1| tRNA-specific 2-thiouridylase mnmA [Bacillus sp. BT1B_CT2]
          Length = 372

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 52/192 (27%), Gaps = 12/192 (6%)

Query: 4   IIKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           + K+      ++  SGG DSS       ++   V  +             C     +   
Sbjct: 1   MAKRPEDTRVVVGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGFC--TATEDYE 58

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +++          + +            + +    + +    PN  V     I       
Sbjct: 59  DVIKVCNQIGIPYYAVN---FEKQYWEKVFQYFLDEYKAGRTPNPDVMCNKEIKFKAFLE 115

Query: 122 LAYRLGITNIVIGVCETDYSGY---PDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLK 176
            A  LG   +  G               R       +T     L  E    V  P+  L+
Sbjct: 116 HALSLGADYLATGHYARVDRTDGRVKMLRGLDENKDQTYFLNQLTEEQLSKVLFPIGQLQ 175

Query: 177 KYETWKLAQDIG 188
           K    ++A++ G
Sbjct: 176 KSRVREIAKEAG 187


>gi|302332222|gb|ADL22415.1| tRNA(Ile)-lysidine synthetase [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 431

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 57/188 (30%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++  S G DS   L   L+ +      +  L  ++G R+    E              ++
Sbjct: 15  VVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEEA-------------RF 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            ++  E H + L I       SL +N +++ +       +      +        A+ L 
Sbjct: 62  LEAYCERHHIDLHIKKLDLSHSLDRNNSIQNEARIKRYEWFDEMMNVLEADVLLTAHHLD 121

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    + +   Y      + R       L       ++ PL+ + K E  +  +  
Sbjct: 122 --------DQLETIMYRIFNGKSTRNKLGFDELSKRKGYQIYRPLLAVSKKEIKQFQERY 173

Query: 188 GGQDLVNL 195
                 + 
Sbjct: 174 HIPYFEDE 181


>gi|256820688|ref|YP_003141967.1| GMP synthase [Capnocytophaga ochracea DSM 7271]
 gi|256582271|gb|ACU93406.1| GMP synthase, large subunit [Capnocytophaga ochracea DSM 7271]
          Length = 515

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 52/187 (27%), Gaps = 19/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DS+            ++  +  + G            + +K  E    
Sbjct: 219 NEKVILGLSGGVDSTVAAVLLNKAIGKQLHCIFVNNG------------LLRK-NEFENV 265

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            K   G    +          ++L        ++       V            T A  L
Sbjct: 266 LKQYEGMGLNVKGVDASARFLTALAGKTD--PEEKRKIIGRVFIEVFDDEAHKITDAQWL 323

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+     P      I++      L     + V  PL  L K E  ++ + 
Sbjct: 324 AQGTIYPDVIESLSVKGPSAT---IKSHHNVGGLPDYMKLKVVEPLRMLFKDEVRRVGRS 380

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 381 LGISDEL 387


>gi|297587726|ref|ZP_06946370.1| GMP synthase (glutamine-hydrolyzing) [Finegoldia magna ATCC 53516]
 gi|297574415|gb|EFH93135.1| GMP synthase (glutamine-hydrolyzing) [Finegoldia magna ATCC 53516]
          Length = 510

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 19/51 (37%), Gaps = 1/51 (1%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
              LL  SGG DSS C S         +  +  D+G   K E +      K
Sbjct: 216 KKVLLALSGGVDSSVCASLLSRAIGKNLTCVFVDHGLMRKNEGDEVEAAFK 266


>gi|239627909|ref|ZP_04670940.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239518055|gb|EEQ57921.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 513

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 53/187 (28%), Gaps = 21/187 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS            ++  +  D+G            +RK   + +    
Sbjct: 217 KVLCALSGGVDSSVAAVMLSKAIGKQLTCVFVDHG-----------LLRKNEGDEVEAVF 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G+  +  + +       +  K V                    F+      A ++G 
Sbjct: 266 GPEGQYDLNFIRVNAQERFYARLKGVEEPEAK-------RKIIGEEFIRVFEEEAKKIGA 318

Query: 129 -TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLAQD 186
              +V G    D       +   I++      L        +  PL  L K E  K   +
Sbjct: 319 VDYLVQGTIYPDVIESGLGKSAVIKSHHNVGGLPEHVDFKELVEPLRLLFKDEVRKAGLE 378

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 379 LGIPEYL 385


>gi|332673843|gb|AEE70660.1| GMP synthase [Helicobacter pylori 83]
          Length = 508

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 52/180 (28%), Gaps = 16/180 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DS+   +       D +  +  D+G   K E E    + K +     +  
Sbjct: 211 KVLCAVSGGVDSTVVATLLHRAIKDNLIAVFVDHGLLRKNEKERVQAMFKDL-----QIP 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  +   + L+ L  +S   L + +            F        L        ++  
Sbjct: 266 LNTIDAKEIFLSKLKGVSEPELKRKII----GETFIEVFEKEAKKHHLKG------KIEF 315

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   S         I+       L       +  PL  L K E   L +++G
Sbjct: 316 LAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEARLLGKELG 375


>gi|311064162|ref|YP_003970887.1| GMP synthase [Bifidobacterium bifidum PRL2010]
 gi|310866481|gb|ADP35850.1| GuaA GMP synthase (glutamine-hydrolyzing) [Bifidobacterium bifidum
           PRL2010]
          Length = 520

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 55/184 (29%), Gaps = 11/184 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+   +       D++  +  D+G   K E+E    V+   V        
Sbjct: 218 VICGLSGGVDSAVAAALVHKAIGDQLTCVFVDHGLLRKGEVE---QVKHDFVAATGIRLI 274

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++          L  +   S  +     I +  +       R ++    A     +    
Sbjct: 275 TVDA----ADDFLEALKGVSEPERKRKIIGEKFIRTFEKAQRQVLEEAGARGKEVK---F 327

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +    +  PL  L K E   +  ++G 
Sbjct: 328 LVQGTLYPDVVESGGGDGAANIKSHHNVGGLPKDIKFQLIEPLRTLFKDEVRAIGTELGL 387

Query: 190 QDLV 193
            D +
Sbjct: 388 PDEI 391


>gi|299470329|emb|CBN78379.1| argininosuccinate synthetase [Ectocarpus siliculosus]
          Length = 432

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 27/73 (36%), Gaps = 2/73 (2%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +L +SGG D+S  L W   +   V     + GQ  + E    +  + K       + 
Sbjct: 16 EKVVLAYSGGLDTSVILKWLSGQGFEVICYCANVGQ--QGEDYDAITKKAKDCGASKVYI 73

Query: 69 DSLGEDHILPLAI 81
          + L E+ +     
Sbjct: 74 EDLCEEFVTDFVF 86


>gi|296453920|ref|YP_003661063.1| GMP synthase large subunit [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296183351|gb|ADH00233.1| GMP synthase, large subunit [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 520

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 55/184 (29%), Gaps = 11/184 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+   +       D++  +  D+G   K E+E    V+   V        
Sbjct: 218 VICGLSGGVDSAVAAALVHKAIGDQLTCVFVDHGLLRKGEVE---QVKHDFVAATGIRLI 274

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++          L  +   S  +     I +  +       R ++    A     +    
Sbjct: 275 TVDA----ADDFLEALKGVSEPERKRKIIGEKFIRTFEKAQRQVLEEAGARGKEVK---F 327

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +    +  PL  L K E   +  ++G 
Sbjct: 328 LVQGTLYPDVVESGGGDGAANIKSHHNVGGLPKDIKFQLIEPLRTLFKDEVRAIGTELGL 387

Query: 190 QDLV 193
            D +
Sbjct: 388 PDEI 391


>gi|237736430|ref|ZP_04566911.1| argininosuccinate synthase [Fusobacterium mortiferum ATCC 9817]
 gi|229421472|gb|EEO36519.1| argininosuccinate synthase [Fusobacterium mortiferum ATCC 9817]
          Length = 399

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVR 57
               +L +SGG D+S  + W  + +    V  +S D GQ++      +  + 
Sbjct: 1  MKEKVVLAYSGGLDTSVIVPWLKENYNDVEVIAVSVDVGQKDDFMEVEKRALA 53


>gi|224282873|ref|ZP_03646195.1| GMP synthase [Bifidobacterium bifidum NCIMB 41171]
 gi|310287318|ref|YP_003938576.1| GMP synthase (glutamine-hydrolyzing) [Bifidobacterium bifidum S17]
 gi|313140034|ref|ZP_07802227.1| GMP synthase [Bifidobacterium bifidum NCIMB 41171]
 gi|309251254|gb|ADO53002.1| GMP synthase (glutamine-hydrolyzing) [Bifidobacterium bifidum S17]
 gi|313132544|gb|EFR50161.1| GMP synthase [Bifidobacterium bifidum NCIMB 41171]
          Length = 520

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 55/184 (29%), Gaps = 11/184 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+   +       D++  +  D+G   K E+E    V+   V        
Sbjct: 218 VICGLSGGVDSAVAAALVHKAIGDQLTCVFVDHGLLRKGEVE---QVKHDFVAATGIRLI 274

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++          L  +   S  +     I +  +       R ++    A     +    
Sbjct: 275 TVDA----ADDFLEALKGVSEPERKRKIIGEKFIRTFEKAQRQVLEEAGARGKEVK---F 327

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +    +  PL  L K E   +  ++G 
Sbjct: 328 LVQGTLYPDVVESGGGDGAANIKSHHNVGGLPKDIKFQLIEPLRTLFKDEVRAIGTELGL 387

Query: 190 QDLV 193
            D +
Sbjct: 388 PDEI 391


>gi|206603533|gb|EDZ40013.1| Argininosuccinate synthase [Leptospirillum sp. Group II '5-way CG']
          Length = 408

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 59/202 (29%), Gaps = 17/202 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI-VELMP 65
               +L +SGG D+S  ++W  ++   +V     D GQ   +E   R   R       + 
Sbjct: 9   PGKVVLAYSGGLDTSVIMTWLKEKYGCQVVAYCADLGQGEDLEEISRKAFRTGASKVYVR 68

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             ++   +D + P+   G +            +   ++    +    +         A  
Sbjct: 69  DLREEFVKDFLFPMIQSGAVY-------EDGYLLGTSIARPLIAKAQMEIARLEGADAVA 121

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G T         + +         + A      +   S +      +   K     +  
Sbjct: 122 HGATGKGNDQVRFEMAYAYFDPRIQVIAPWREWEMSSRSEL------INYAKKHAIPIQA 175

Query: 186 DIGGQDLVNLILEESHTCYLGK 207
            +     ++  L   HT Y G 
Sbjct: 176 TLEKPYSIDRNLF--HTSYEGG 195


>gi|183981704|ref|YP_001849995.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase TrmU
           [Mycobacterium marinum M]
 gi|183175030|gb|ACC40140.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase TrmU
           [Mycobacterium marinum M]
          Length = 357

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 40/176 (22%), Gaps = 4/176 (2%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL-MPKWKDSLGE 73
            SGG DSS   +  +D    V  +                    K       +  D LG 
Sbjct: 1   MSGGVDSSVAAARMVDAGHDVVGVHLALSTAPGALRTGSRGCCSKEDASDARRVADVLGI 60

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
              +      +     +  +          PN  +     I        A  LG   +V 
Sbjct: 61  PFYVW--DFAERFKEDVIDDFVSSYARGETPNPCIRCNQRIKFSALYAKALALGFDVVVT 118

Query: 134 GVCETDYSGY-PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
           G       G                  L  E       P+    K +  + A   G
Sbjct: 119 GHYARLSEGRLRRAVDQDKDQSYVLAVLTAEQLRHAMFPIGDTPKPQIREEASRRG 174


>gi|241205251|ref|YP_002976347.1| argininosuccinate synthase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240859141|gb|ACS56808.1| argininosuccinate synthase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 403

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 43/166 (25%), Gaps = 2/166 (1%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + K    +L +SGG D+S  L W  +     V T + D GQ  ++E          + ++
Sbjct: 1   MTKIEKIVLSYSGGLDTSIILKWLQETYGCEVVTFTADLGQGEELEPARANAEMVGVKDI 60

Query: 64  MPK-WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                ++    D + P+     +         ++           +        V     
Sbjct: 61  RIVDLREEFVSDFVFPMLRANALYEGQYLLGSSIARPLIAKHLVGIAREVGADAVAHGAT 120

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV 168
                     + V   D S                  L       +
Sbjct: 121 GKGNDQIRFELAVNALDPSIKVIAPWRQWNIRSRMQLLEYAEKHHI 166


>gi|124516707|gb|EAY58215.1| Argininosuccinate synthase [Leptospirillum rubarum]
          Length = 408

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 59/202 (29%), Gaps = 17/202 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI-VELMP 65
               +L +SGG D+S  ++W  ++   +V     D GQ   +E   R   R       + 
Sbjct: 9   PGKVVLAYSGGLDTSVIMTWLKEKYGCQVVAYCADLGQGEDLEEISRKAFRTGASKVYVR 68

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             ++   +D + P+   G +            +   ++    +    +         A  
Sbjct: 69  DLREEFVKDFLFPMIQSGAVY-------EDGYLLGTSIARPLIAKAQMEIARLEGADAVA 121

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G T         + +         + A      +   S +      +   K     +  
Sbjct: 122 HGATGKGNDQVRFEMAYAYFDPRIQVIAPWREWEMSSRSEL------INYAKKHAIPIQA 175

Query: 186 DIGGQDLVNLILEESHTCYLGK 207
            +     ++  L   HT Y G 
Sbjct: 176 TLEKPYSIDRNLF--HTSYEGG 195


>gi|308812558|ref|XP_003083586.1| GMP synthetase (ISS) [Ostreococcus tauri]
 gi|116055467|emb|CAL58135.1| GMP synthetase (ISS) [Ostreococcus tauri]
          Length = 604

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 54/185 (29%), Gaps = 9/185 (4%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
           N+ + K    +   SGG DS+   +       DR+  +  D G     E   +  V +  
Sbjct: 236 NEKVGKDAHVICALSGGVDSAVAATLVHKAIGDRLHCVFVDNGLLRYKE---QERVMEMF 292

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            + +        +     L  L  +S     + +            F   ++ I      
Sbjct: 293 KDHLH-LPVDCVDHSEQMLKALAGVSDPEKKRKIIGA----EFIECFKNFKSEIEKRTGV 347

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
              + +  T     +      G       TI++      L  E    +  PL  L K E 
Sbjct: 348 RPTFLVQGTLYPDVIESCPPPGSDQKHSHTIKSHHNVGGLPKELGFELVEPLRMLFKDEV 407

Query: 181 WKLAQ 185
            KL  
Sbjct: 408 RKLGA 412


>gi|113953824|ref|YP_729973.1| tRNA-specific 2-thiouridylase MnmA [Synechococcus sp. CC9311]
 gi|123327918|sp|Q0IC49|MNMA_SYNS3 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|113881175|gb|ABI46133.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Synechococcus sp. CC9311]
          Length = 391

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 49/187 (26%), Gaps = 17/187 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +  SGG DSS   +  ++    VE L+        +      C  + +V+     + 
Sbjct: 31  RVAVGLSGGVDSSLTAALMVEAGWEVEGLTL------WLMSGKGACCAEGLVDAAGICQQ 84

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR-LGI 128
                H++            + + +    +    P         +        A +   +
Sbjct: 85  LGVPHHVVDSRD---TFVREIVQGLVDGYRAGITPLPCSKCNRSVKFGPMLAWAEQERNL 141

Query: 129 TNIVIGVCETDYSGYPDCRH-------DTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
             I  G          D R                  +L  E    V  PL  L K +T 
Sbjct: 142 PRIATGHYARIRLDREDGRWKLLRGLDRRKDQSYFLYDLPQEVLARVVFPLGELTKADTR 201

Query: 182 KLAQDIG 188
             A   G
Sbjct: 202 LEAGRHG 208


>gi|332519045|ref|ZP_08395512.1| Argininosuccinate synthase [Lacinutrix algicola 5H-3-7-4]
 gi|332044893|gb|EGI81086.1| Argininosuccinate synthase [Lacinutrix algicola 5H-3-7-4]
          Length = 395

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 49/181 (27%), Gaps = 16/181 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++ +SGG D+S C          V  +S + G     E++       K+     K 
Sbjct: 3   NKKLVIAYSGGLDTSYCAVSLSKD-YDVHAVSVNTGGFTAEEIKKIESNAYKMGVSTYKN 61

Query: 68  KDSLGED--HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            D++      ++   I G++  ++                  V    II  +     A  
Sbjct: 62  IDAVATFYNKVVKYLIFGNVLKNA-------------TYPLSVSAERIIQAIEIIEYAKS 108

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +    I  G                  A    I   +          +   K E   ++ 
Sbjct: 109 IDAEYIAHGSTGAGNDQVRFDMIFQTLAPGIKIITPIRDQKLTREEEIEYLKSEGVDMSW 168

Query: 186 D 186
           +
Sbjct: 169 E 169


>gi|288560731|ref|YP_003424217.1| hypothetical protein mru_1475 [Methanobrevibacter ruminantium M1]
 gi|288543441|gb|ADC47325.1| hypothetical protein mru_1475 [Methanobrevibacter ruminantium M1]
          Length = 386

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 17/37 (45%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
           + P A++  SGG DSS  L  A         ++ D G
Sbjct: 149 EKPVAIVALSGGTDSSFSLILAKKLGFNPIAVTVDPG 185


>gi|209694327|ref|YP_002262255.1| GMP synthase [Aliivibrio salmonicida LFI1238]
 gi|226738377|sp|B6EGZ6|GUAA_ALISL RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|208008278|emb|CAQ78423.1| GMP synthase [glutamine-hydrolyzing] [Aliivibrio salmonicida
           LFI1238]
          Length = 517

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 56/181 (30%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS     A     D++  +  D G     E        ++++E+  +   
Sbjct: 222 VILGLSGGVDSSVVAMLAHRAIGDKLTCVFVDNGLLRLNE-------AEQVMEMFSEGFG 274

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                       L  +S  S         +        V            + A  L   
Sbjct: 275 LKIIHVEAEERFLSALSGESDP-------EAKRKIIGHVFVDIFDEESKKLSNAKWLAQG 327

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S     +   I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 328 TIYPDVIESAAS--KTGKAHVIKSHHNVGGLPDDMEMGLVEPLRELFKDEVRKIGLELGL 385

Query: 190 Q 190
            
Sbjct: 386 P 386


>gi|158422369|ref|YP_001523661.1| argininosuccinate synthase [Azorhizobium caulinodans ORS 571]
 gi|172048046|sp|A8IQ54|ASSY_AZOC5 RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|158329258|dbj|BAF86743.1| argininosuccinate synthase [Azorhizobium caulinodans ORS 571]
          Length = 408

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 45/158 (28%), Gaps = 5/158 (3%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +     +L +SGG D+S  L W    +   V T + D GQ  ++E        + +  
Sbjct: 1   MSRDVKKVVLAYSGGLDTSVILKWLQTTYRCEVVTFTADLGQGEELEP--ARKKAELLGI 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                      +  +   +       +        +   ++    +  + I         
Sbjct: 59  KPENIFIEDVREEFVRDYVF--PMFRANAVYEGQYLLGTSIARPLIAKKQIEIARKVGAD 116

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         +   Y      T+ A     +L
Sbjct: 117 AVSHGATGKGNDQVRFELGYYALEPEITVIAPWREWDL 154


>gi|58581818|ref|YP_200834.1| GMP synthase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58426412|gb|AAW75449.1| glutamine amidotransferase [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 537

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 48/181 (26%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D G     E +              +   
Sbjct: 242 VILGLSGGVDSSVVAALLHKAIGDKLTCVFVDTGLLRWQEGD--------------QVMA 287

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E   + +  +                +        +              A  L   
Sbjct: 288 MFAEHMGVKVIRVNAADRYFAKLEGVSDPEAKRKIIGNLFVEIFDEESNTLANAKWLAQG 347

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S         I++      L     + +  PL  L K E  +L  ++G 
Sbjct: 348 TIYPDVIESAGS--KTGNAHVIKSHHNVGGLPQHMKLGLVEPLRELFKDEVRRLGVELGL 405

Query: 190 Q 190
            
Sbjct: 406 P 406


>gi|84623720|ref|YP_451092.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|91206840|sp|Q2P3Q9|GUAA_XANOM RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|91206841|sp|Q5H0S2|GUAA_XANOR RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|84367660|dbj|BAE68818.1| GMP synthase [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 521

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 48/181 (26%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D G     E +              +   
Sbjct: 226 VILGLSGGVDSSVVAALLHKAIGDKLTCVFVDTGLLRWQEGD--------------QVMA 271

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E   + +  +                +        +              A  L   
Sbjct: 272 MFAEHMGVKVIRVNAADRYFAKLEGVSDPEAKRKIIGNLFVEIFDEESNTLANAKWLAQG 331

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S         I++      L     + +  PL  L K E  +L  ++G 
Sbjct: 332 TIYPDVIESAGS--KTGNAHVIKSHHNVGGLPQHMKLGLVEPLRELFKDEVRRLGVELGL 389

Query: 190 Q 190
            
Sbjct: 390 P 390


>gi|315223813|ref|ZP_07865662.1| GMP synthase [Capnocytophaga ochracea F0287]
 gi|314946259|gb|EFS98259.1| GMP synthase [Capnocytophaga ochracea F0287]
          Length = 515

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 52/187 (27%), Gaps = 19/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DS+            ++  +  + G            + +K  E    
Sbjct: 219 NEKVILGLSGGVDSTVAAVLLNKAIGKQLHCIFVNNG------------LLRK-NEFENV 265

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            K   G    +          ++L        ++       V            T A  L
Sbjct: 266 LKQYEGMGLNVKGVDASARFLTALAGKTD--PEEKRKTIGRVFIEVFDDEAHKITDAQWL 323

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+     P      I++      L     + V  PL  L K E  ++ + 
Sbjct: 324 AQGTIYPDVIESLSVKGPSAT---IKSHHNVGGLPDYMKLKVVEPLRMLFKDEVRRVGRS 380

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 381 LGISDEL 387


>gi|300710433|ref|YP_003736247.1| asparagine synthase [Halalkalicoccus jeotgali B3]
 gi|299124116|gb|ADJ14455.1| asparagine synthase [Halalkalicoccus jeotgali B3]
          Length = 536

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 20/59 (33%), Gaps = 1/59 (1%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
            SGG DS                 +F YGQ  + E+E    V   I       + + G+
Sbjct: 194 LSGGVDSRLIALHLKRAGYNNIF-TFTYGQPGESEVETARQVADDIGLEWEHVEYTPGK 251


>gi|292654369|ref|YP_003534266.1| hypothetical protein HVO_0190 [Haloferax volcanii DS2]
 gi|291372836|gb|ADE05063.1| conserved hypothetical protein TIGR00268 [Haloferax volcanii DS2]
          Length = 298

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/242 (13%), Positives = 64/242 (26%), Gaps = 39/242 (16%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
            + + +  S L+ FSGG DSS   + A +   D     +         EL+    V ++I
Sbjct: 14  REALAERESVLIAFSGGVDSSVVAALAHEALGDDAVACTAKSETLPDAELDDAKRVAEEI 73

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                       E   +  + L +    +   +     +   L   +   R+        
Sbjct: 74  G----------IEHLTVEFSELDNPDFVANDDDRCYHCRTMRLGRMYEAARDRGIEAVCD 123

Query: 121 TLAYRL--GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
                         +   E      P   H   +    AI    +  V     +  L   
Sbjct: 124 GTNASDPGEGHRPGLRAVEELEVLSPLLAHGITKEEVRAIADDYDLSVADKPSMACLSSR 183

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKY 238
                  ++  + L  +   E+                         LR  G+ +F+ + 
Sbjct: 184 --IPTGLEVTEERLSRVERAET------------------------ILRTWGFEQFRVRD 217

Query: 239 QD 240
            D
Sbjct: 218 HD 219


>gi|219718440|ref|YP_002474197.1| GMP synthase [glutamine-hydrolyzing] (Glutamineamidotransferase)
           [Borrelia garinii PBr]
 gi|219694117|gb|ACL34647.1| GMP synthase [glutamine-hydrolyzing] (Glutamineamidotransferase)
           [Borrelia garinii PBr]
          Length = 528

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 58/184 (31%), Gaps = 23/184 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDR-VETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +L  SGG DS  C           +  +  + G   K E        KKI+EL  +
Sbjct: 232 SKKVILGLSGGTDSLVCALLIKKAIKENLICVFVNTGLLRKNED-------KKILELKHQ 284

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  +      +      +   + L      + +   +   FV     I L          
Sbjct: 285 YDLN------IKYIDASEKFLNHLKNISDPEEKRKIIGKEFVNVFEKITL-------EDQ 331

Query: 127 GITNIVIGVCETDY--SGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            I  +  G   +D   S   +     I++      L  +  + +  PL    K E  ++ 
Sbjct: 332 NIEYLAQGTIYSDVIESKSKNNASSKIKSHHNVGGLPDKMRLKLLEPLNEFFKDEIIQIG 391

Query: 185 QDIG 188
            ++G
Sbjct: 392 INLG 395


>gi|157736934|ref|YP_001489617.1| putative LPS biosynthesis protein WbpG [Arcobacter butzleri RM4018]
 gi|157698788|gb|ABV66948.1| putative LPS biosynthesis protein WbpG [Arcobacter butzleri RM4018]
          Length = 375

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/202 (11%), Positives = 52/202 (25%), Gaps = 9/202 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
            K    +L  SGG DS+      ++   R   +  D G  +++ ++    V   +   + 
Sbjct: 68  NKNYDCILGLSGGVDSTYLAYLVVELGLRPLVVHIDTGWNSEIAVQNIENVVNILNLDLH 127

Query: 66  KWKDSLGEDHILPLAILGDISHS-----SLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                  E   L LA                    +           +   + I   +  
Sbjct: 128 THVIDWEEMKDLQLAFFKASVPDCDIPQDHVFPALLNKIAKENKIKHIVSGHNIVTEYIL 187

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV---TVHTPLMWLKK 177
              +     ++   +      G    +     ++   +                 +   K
Sbjct: 188 PRNWSYDSNDLTHILDIHKRFGKIPLKKYPRYSLFDRMFTYRWIFPVKSHRFLYYVPYNK 247

Query: 178 YETWKLAQD-IGGQDLVNLILE 198
            E  K  Q+ +G +D      E
Sbjct: 248 EEIKKFIQEKLGWRDYGGKHFE 269


>gi|15964067|ref|NP_384420.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Sinorhizobium meliloti 1021]
 gi|307301211|ref|ZP_07580973.1| GMP synthase, large subunit [Sinorhizobium meliloti BL225C]
 gi|307321113|ref|ZP_07600518.1| GMP synthase, large subunit [Sinorhizobium meliloti AK83]
 gi|24211760|sp|Q92SQ3|GUAA_RHIME RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|15073243|emb|CAC41751.1| Probable GMP synthase glutamine-hydrolyzing protein [Sinorhizobium
           meliloti 1021]
 gi|306893285|gb|EFN24066.1| GMP synthase, large subunit [Sinorhizobium meliloti AK83]
 gi|306903667|gb|EFN34254.1| GMP synthase, large subunit [Sinorhizobium meliloti BL225C]
          Length = 520

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 50/184 (27%), Gaps = 17/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS       +   D++  +  D+G   K E                  
Sbjct: 223 KKVICALSGGVDSSVAALLIHEAVGDQLTCILVDHGLMRKDE--------------AANV 268

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                E + L L  +                +        +              A  L 
Sbjct: 269 VAMFKEHYNLHLLHIDASDRFIGELEGVSDPETKRKIIGRLFIEVFEEEAKKLGGADFLA 328

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   V E+    +      TI++      L    ++ +  PL  L K E   L +++
Sbjct: 329 QGTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMNMQLVEPLRELFKDEVRVLGREL 386

Query: 188 GGQD 191
           G  +
Sbjct: 387 GLPE 390


>gi|325927859|ref|ZP_08189083.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Xanthomonas perforans 91-118]
 gi|325541699|gb|EGD13217.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Xanthomonas perforans 91-118]
          Length = 378

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 45/188 (23%), Gaps = 11/188 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            P  ++  SGG DSS        + + +  L       +          R+  V +    
Sbjct: 3   TPRIVVGVSGGVDSSVAAWKLAQQGEPIAGLFMQNWADDGSGDCRAEDDRRDAVAVCGVL 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                               S +  +   +      PN  V     +        A  LG
Sbjct: 63  GIP------FHFRDFSGEYWSGVFAHFLAEYAAGRTPNPDVLCNREVKFKHFLDAAQALG 116

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G            R                 LG         P+  L+K    +
Sbjct: 117 AERIATGHYAQVAHRGGRWRLLRGADRGKDQSYFLHQLGQAQLAATLFPIGDLEKSALRR 176

Query: 183 LAQDIGGQ 190
           +AQD G  
Sbjct: 177 IAQDAGLP 184


>gi|307262342|ref|ZP_07543989.1| Sulfate adenylyltransferase subunit 2 [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306867958|gb|EFM99787.1| Sulfate adenylyltransferase subunit 2 [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 308

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 47/182 (25%), Gaps = 18/182 (9%)

Query: 13  LLFSGGQDSSTCLSWALD----RFDRVE----TLSFDYGQRNKVELECRLCVRKKIVELM 64
           LLFSGG+DS   L+ A          +      +  D G      ++ R    KK+    
Sbjct: 35  LLFSGGKDSVVLLALARKAFQLEGRELVLPFPLVHIDTGHNYPEVIQFRDEQVKKLNA-- 92

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L   H+      G +     T +         L      G + +          
Sbjct: 93  -----KLVVGHVEDSIAKGTVVLRKETDSRNAAQAVTLLETIEANGFDALMGGARRDEEK 147

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                 I     E           +        ++ G    V    P+    + + W+  
Sbjct: 148 ARAKERIFSFRDEFGQWDPKAQHPELWSLYNAKLHKGENMRV---FPISNWTELDIWQYI 204

Query: 185 QD 186
           + 
Sbjct: 205 ER 206


>gi|300858377|ref|YP_003783360.1| argininosuccinate synthase [Corynebacterium pseudotuberculosis
          FRC41]
 gi|300685831|gb|ADK28753.1| Argininosuccinate synthase [Corynebacterium pseudotuberculosis
          FRC41]
 gi|302206090|gb|ADL10432.1| Putative argininosuccinate synthase [Corynebacterium
          pseudotuberculosis C231]
 gi|302330643|gb|ADL20837.1| argininosuccinate synthase [Corynebacterium pseudotuberculosis
          1002]
 gi|308276327|gb|ADO26226.1| argininosuccinate synthase [Corynebacterium pseudotuberculosis
          I19]
          Length = 399

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 19/53 (35%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
               +L +SGG D+S  +   A      V  +S D GQ  +     R     
Sbjct: 1  MTNRVVLAYSGGLDTSVAIPYLAKMTGGEVVAVSLDLGQGGEDMESVRQRALD 53


>gi|293567955|ref|ZP_06679296.1| GMP synthase [Enterococcus faecium E1071]
 gi|291589540|gb|EFF21347.1| GMP synthase [Enterococcus faecium E1071]
          Length = 303

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 60/194 (30%), Gaps = 20/194 (10%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
           MN ++      LL  SGG DSS           D++ ++  D+G   K E      V + 
Sbjct: 1   MNKLV---KKVLLGLSGGVDSSVVGVLLQKAIGDQLTSIFVDHGLLRKGE---AEQVMES 54

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +                  L I+   +       +                   +F   A
Sbjct: 55  LGGKFG-------------LNIIKVDARDRFLDKLKGVSDPEQKRKIIGNEFVYVFDDEA 101

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
             LA   G++ +  G   TD          TI++      L  +    +  PL  L K E
Sbjct: 102 TKLAGEEGVSFLAQGTLYTDVIESGTETAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDE 161

Query: 180 TWKLAQDIGGQDLV 193
             +L   +G  D +
Sbjct: 162 VRELGTQLGMPDSI 175


>gi|257876105|ref|ZP_05655758.1| GMP synthase [Enterococcus casseliflavus EC20]
 gi|257810271|gb|EEV39091.1| GMP synthase [Enterococcus casseliflavus EC20]
          Length = 521

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 56/186 (30%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V + +       
Sbjct: 224 KKVLLGLSGGVDSSVVGVLLQKAIGDQLTCIFVDHGLLRKGE---AEQVMESLGGKFG-- 278

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      L I+   +       +A                  +F   A  LA   G
Sbjct: 279 -----------LNIIKVDAKERFLSKLAGVSDPEEKRKIIGNEFVYVFDDEATKLAGEEG 327

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           ++ +  G   TD          TI++      L  +    +  PL  L K E  +L   +
Sbjct: 328 VSFLAQGTLYTDVIESGTETAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRELGTQL 387

Query: 188 GGQDLV 193
           G  D +
Sbjct: 388 GMPDSI 393


>gi|257870487|ref|ZP_05650140.1| GMP synthase [Enterococcus gallinarum EG2]
 gi|257804651|gb|EEV33473.1| GMP synthase [Enterococcus gallinarum EG2]
          Length = 521

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 56/186 (30%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V + +       
Sbjct: 224 KKVLLGLSGGVDSSVVGVLLQKAIGDQLTCIFVDHGLLRKGE---AEQVMESLGGKFG-- 278

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      L I+   +       +A                  +F   A  LA   G
Sbjct: 279 -----------LNIIKVDAKERFLSKLAGVSDPEEKRKIIGNEFVYVFDDEATKLAGEEG 327

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           ++ +  G   TD          TI++      L  +    +  PL  L K E  +L   +
Sbjct: 328 VSFLAQGTLYTDVIESGTETAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRELGTQL 387

Query: 188 GGQDLV 193
           G  D +
Sbjct: 388 GMPDSI 393


>gi|257866501|ref|ZP_05646154.1| GMP synthase [Enterococcus casseliflavus EC30]
 gi|257872983|ref|ZP_05652636.1| GMP synthase [Enterococcus casseliflavus EC10]
 gi|257800459|gb|EEV29487.1| GMP synthase [Enterococcus casseliflavus EC30]
 gi|257807147|gb|EEV35969.1| GMP synthase [Enterococcus casseliflavus EC10]
          Length = 521

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 56/186 (30%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V + +       
Sbjct: 224 KKVLLGLSGGVDSSVVGVLLQKAIGDQLTCIFVDHGLLRKGE---AEQVMESLGGKFG-- 278

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      L I+   +       +A                  +F   A  LA   G
Sbjct: 279 -----------LNIIKVDAKERFLSKLAGVSDPEEKRKIIGNEFVYVFDDEATKLAGEEG 327

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           ++ +  G   TD          TI++      L  +    +  PL  L K E  +L   +
Sbjct: 328 VSFLAQGTLYTDVIESGTETAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRELGTQL 387

Query: 188 GGQDLV 193
           G  D +
Sbjct: 388 GMPDSI 393


>gi|241667351|ref|ZP_04754929.1| argininosuccinate synthase [Francisella philomiragia subsp.
          philomiragia ATCC 25015]
 gi|254875902|ref|ZP_05248612.1| predicted protein [Francisella philomiragia subsp. philomiragia
          ATCC 25015]
 gi|254841923|gb|EET20337.1| predicted protein [Francisella philomiragia subsp. philomiragia
          ATCC 25015]
          Length = 418

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQ 44
            LLL+SGG D+S  L W  +     V  L+ D GQ
Sbjct: 20 RCLLLYSGGLDTSVMLKWIQEEYGVEVVALTIDIGQ 55


>gi|229055099|ref|ZP_04195529.1| GMP synthase, large subunit [Bacillus cereus AH603]
 gi|228721247|gb|EEL72773.1| GMP synthase, large subunit [Bacillus cereus AH603]
          Length = 515

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G    +  +    V K   E     
Sbjct: 221 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHG---LLRKDEAEGVMKTFSEGFHMN 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G                ++      + G   I++        + G
Sbjct: 278 VIKVDAKERFMNKLKG---------------VEDPEQKRKIIGNEFIYVFDDEASRLK-G 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 322 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 381

Query: 188 GGQDLV 193
           G  D +
Sbjct: 382 GIPDEI 387


>gi|225175850|ref|ZP_03729843.1| ExsB family protein [Dethiobacter alkaliphilus AHT 1]
 gi|225168774|gb|EEG77575.1| ExsB family protein [Dethiobacter alkaliphilus AHT 1]
          Length = 266

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 1/68 (1%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKK 59
          +  I+++  S L+ FSGG DSS  L+ A     D+V  ++         E E    +  K
Sbjct: 11 LTTILEEMGSVLVAFSGGVDSSVLLAMASGTLGDKVLAVTAASETYLSEEQEVAERLAAK 70

Query: 60 IVELMPKW 67
          +   +   
Sbjct: 71 LQVPLQVI 78


>gi|225022593|ref|ZP_03711785.1| hypothetical protein CORMATOL_02635 [Corynebacterium matruchotii
          ATCC 33806]
 gi|305681956|ref|ZP_07404760.1| argininosuccinate synthase [Corynebacterium matruchotii ATCC
          14266]
 gi|224944501|gb|EEG25710.1| hypothetical protein CORMATOL_02635 [Corynebacterium matruchotii
          ATCC 33806]
 gi|305658429|gb|EFM47932.1| argininosuccinate synthase [Corynebacterium matruchotii ATCC
          14266]
          Length = 398

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 19/53 (35%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
               +L +SGG D+S  +   A      V  +S D GQ  +     R     
Sbjct: 1  MTNRVVLAYSGGLDTSVAIPYLAKMTGGEVVAVSLDLGQGGEDMESVRQRALD 53


>gi|167626771|ref|YP_001677271.1| argininosuccinate synthase [Francisella philomiragia subsp.
          philomiragia ATCC 25017]
 gi|167596772|gb|ABZ86770.1| Argininosuccinate synthase [Francisella philomiragia subsp.
          philomiragia ATCC 25017]
          Length = 418

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQ 44
            LLL+SGG D+S  L W  +     V  L+ D GQ
Sbjct: 20 RCLLLYSGGLDTSVMLKWIQEEYGVEVVALTIDIGQ 55


>gi|148652768|ref|YP_001279861.1| tRNA-specific 2-thiouridylase MnmA [Psychrobacter sp. PRwf-1]
 gi|205816892|sp|A5WE20|MNMA_PSYWF RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|148571852|gb|ABQ93911.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Psychrobacter sp. PRwf-1]
          Length = 398

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 46/186 (24%), Gaps = 9/186 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS           +VE L     + +     C     + + +       
Sbjct: 29  RVVVGMSGGVDSSVSAVLLQQAGFQVEGLFMKNWEEDDGTEYC--TAMEDLADAQAVCDK 86

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                H    A         + ++   + Q    PN  +     I        A  LG  
Sbjct: 87  IGINLHT---ANFAMEYWDRVFEHFLAEYQAGRTPNPDILCNKEIKFKAFLDYAVTLGAD 143

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G            R D +        L      +     +   K    K    +G 
Sbjct: 144 YIATGHYTR--RSVNYTREDGLEVAHLMRGLDNNKDQSYFLHAVGGDK--IAKTLFPVGE 199

Query: 190 QDLVNL 195
            +   +
Sbjct: 200 LEKPEV 205


>gi|73539065|ref|YP_299432.1| argininosuccinate synthase [Ralstonia eutropha JMP134]
 gi|72122402|gb|AAZ64588.1| argininosuccinate synthase [Ralstonia eutropha JMP134]
          Length = 441

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +      K       +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAIPYAYTANLGQPDEPDYDDIPRRAKAYGAEEARLVD 72


>gi|38233763|ref|NP_939530.1| argininosuccinate synthase [Corynebacterium diphtheriae NCTC
          13129]
 gi|47605389|sp|P61521|ASSY_CORDI RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|38200024|emb|CAE49693.1| argininosuccinate synthase [Corynebacterium diphtheriae]
          Length = 399

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 19/53 (35%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
               +L +SGG D+S  +   A      V  +S D GQ  +     R     
Sbjct: 1  MTNRVVLAYSGGLDTSVAIPYLAKMTGGEVVAVSLDLGQGGEDMESVRQRALD 53


>gi|88809139|ref|ZP_01124648.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Synechococcus sp. WH 7805]
 gi|88787081|gb|EAR18239.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Synechococcus sp. WH 7805]
          Length = 409

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 48/187 (25%), Gaps = 17/187 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +  SGG DSS   +  ++    VE L+        +      C  + +V+     + 
Sbjct: 49  RVAVGLSGGVDSSLTAALLVEAGWDVEGLTL------WLMSGKGACCAEGLVDAAGICEQ 102

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA-YRLGI 128
                H++      +     +   +    Q    P         +        A    G+
Sbjct: 103 LEIPHHVVDS---RETFQREIVNGLIEGYQAGITPLPCSRCNRAVKFSPMLRWAQEERGL 159

Query: 129 TNIVIGVCETDYSGYPDCRHD-------TIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
             I  G            R                  +L  E    V  PL  L K +T 
Sbjct: 160 ARIATGHYARLRFDDSSSRWRLLRGLDARKDQSYFLYDLTQEVLDRVVFPLGELTKPDTR 219

Query: 182 KLAQDIG 188
             A   G
Sbjct: 220 LEAARHG 226


>gi|326390922|ref|ZP_08212473.1| GMP synthase, large subunit [Thermoanaerobacter ethanolicus JW 200]
 gi|325993070|gb|EGD51511.1| GMP synthase, large subunit [Thermoanaerobacter ethanolicus JW 200]
          Length = 512

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 54/185 (29%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DSS           D++  +  D G   K E +  +   +K         
Sbjct: 219 KAVCALSGGVDSSVAAVLVDRAIHDQLVCIFVDTGLLRKNEGDMVIETFRK--------- 269

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                D  +      D   S L      + +   + N F+       L          G 
Sbjct: 270 ---NYDMNIIRVDARDRFLSRLKGVTDSEEKRKIIGNVFIEVFKEEALKIGDVKFLVQGT 326

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
               +       S         I++      L  +    +  PL  L K E  ++ +++G
Sbjct: 327 LYPDVIESGNGVSST-------IKSHHNVGGLPEDIGFELIEPLRMLFKDEVRQVGKELG 379

Query: 189 GQDLV 193
             + +
Sbjct: 380 IPEEI 384


>gi|317482305|ref|ZP_07941326.1| GMP synthase domain-containing protein [Bifidobacterium sp.
           12_1_47BFAA]
 gi|316916321|gb|EFV37722.1| GMP synthase domain-containing protein [Bifidobacterium sp.
           12_1_47BFAA]
          Length = 520

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 56/184 (30%), Gaps = 11/184 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+   +       D++  +  D+G   K E+E    V+   V        
Sbjct: 218 VICGLSGGVDSAVAAALVHKAIGDQLTCVFVDHGLLRKGEVE---QVKHDFVAATGIRLI 274

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++          L  ++  S  +     I +  +       R ++    A     +    
Sbjct: 275 TVDA----ADDFLDALAGVSEPERKRKIIGEKFIRTFEKAQRQVLEEAGARGKEVK---F 327

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +    +  PL  L K E   +  ++G 
Sbjct: 328 LVQGTLYPDVVESGGGDGAANIKSHHNVGGLPKDIKFQLIEPLRTLFKDEVRAIGTELGL 387

Query: 190 QDLV 193
            D +
Sbjct: 388 PDEI 391


>gi|227541810|ref|ZP_03971859.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227182253|gb|EEI63225.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 609

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 51/185 (27%), Gaps = 16/185 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+   +       DR+  +  D+G     E +          + +    
Sbjct: 311 RAICGLSGGVDSAVAAAIVQRAIGDRLTCVFVDHGLLRAGERQQVEE------DFVKATG 364

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             L     +  +       + +T+  A +                  L          G 
Sbjct: 365 AKLV---TVDESEAFLSKLAGVTEPEAKRKAIGAEFIRSFERAVAGVLDGQDVGFLVQGT 421

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
               +                 I++      L  +    +  PL  L K E   + +++G
Sbjct: 422 LYPDVVESGGGSGTA------NIKSHHNVGGLPDDVEFELVEPLRLLFKDEVRAVGRELG 475

Query: 189 GQDLV 193
             +++
Sbjct: 476 LPEVI 480


>gi|227487027|ref|ZP_03917343.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227093101|gb|EEI28413.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Corynebacterium glucuronolyticum ATCC 51867]
          Length = 609

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 51/185 (27%), Gaps = 16/185 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+   +       DR+  +  D+G     E +          + +    
Sbjct: 311 RAICGLSGGVDSAVAAAIVQRAIGDRLTCVFVDHGLLRAGERQQVEE------DFVKATG 364

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             L     +  +       + +T+  A +                  L          G 
Sbjct: 365 AKLV---TVDESEAFLSKLAGVTEPEAKRKAIGAEFIRSFERAVAGVLDGQDVGFLVQGT 421

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
               +                 I++      L  +    +  PL  L K E   + +++G
Sbjct: 422 LYPDVVESGGGSGTA------NIKSHHNVGGLPDDVEFELVEPLRLLFKDEVRAVGRELG 475

Query: 189 GQDLV 193
             +++
Sbjct: 476 LPEVI 480


>gi|223986197|ref|ZP_03636216.1| hypothetical protein HOLDEFILI_03526 [Holdemania filiformis DSM
           12042]
 gi|223961834|gb|EEF66327.1| hypothetical protein HOLDEFILI_03526 [Holdemania filiformis DSM
           12042]
          Length = 381

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/189 (12%), Positives = 51/189 (26%), Gaps = 12/189 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWK 68
             L+  SGG DS+        +   V      ++      +          +      W 
Sbjct: 3   KILVGLSGGVDSAVAAYLLKQQGLDVTCAFMRNWDSMANNDFLGNPNADDDVCPQEKDWM 62

Query: 69  D-----SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           D           +L +  + +   +  +  +    +        +     I        A
Sbjct: 63  DAKSVADSLGLELLRVDFVKEYWDNVFSNFLQEYKKGRTPNPDILC-NKYIKFSSFLDFA 121

Query: 124 YRLGITNIVIGVCET-----DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            R G   +  G         D+SG                 +  ++      PL  ++K 
Sbjct: 122 RRRGFDTLATGHYARVRHEADFSGLYKAHDLNKDQSYFLCQVASDALRHTLFPLGEIEKP 181

Query: 179 ETWKLAQDI 187
           E  ++A+++
Sbjct: 182 EVRRIAKEL 190


>gi|213692591|ref|YP_002323177.1| GMP synthase, large subunit [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|213524052|gb|ACJ52799.1| GMP synthase, large subunit [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|320458743|dbj|BAJ69364.1| GMP synthase/glutamine amidotransferase [Bifidobacterium longum
           subsp. infantis ATCC 15697]
          Length = 520

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 53/186 (28%), Gaps = 15/186 (8%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+   +       D++  +  D+G   K E+E                  
Sbjct: 218 VICGLSGGVDSAVAAALVHKAIGDQLTCVFVDHGLLRKGEVEQ---------VKHDFVAA 268

Query: 70  SLGEDHILP--LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +  +   +      L  +   S  +     I +  +       R ++    A     +  
Sbjct: 269 TGIKLITVDAADDFLEALKGVSEPERKRKIIGEKFIRTFEKAQRQVLEEAGARGKEVK-- 326

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   +               I++      L  +    +  PL  L K E   +  ++
Sbjct: 327 -FLVQGTLYPDVVESGGGDGAANIKSHHNVGGLPKDIKFQLIEPLRTLFKDEVRAIGTEL 385

Query: 188 GGQDLV 193
           G  D +
Sbjct: 386 GLPDEI 391


>gi|23465533|ref|NP_696136.1| GMP synthase [Bifidobacterium longum NCC2705]
 gi|44887966|sp|Q8G5P4|GUAA_BIFLO RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|23326195|gb|AAN24772.1| GMP synthase glutamine amidotransferase [Bifidobacterium longum
           NCC2705]
          Length = 535

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 56/184 (30%), Gaps = 11/184 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+   +       D++  +  D+G   K E+E    V+   V        
Sbjct: 233 VICGLSGGVDSAVAAALVHKAIGDQLTCVFVDHGLLRKGEVE---QVKHDFVAATGIRLI 289

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++          L  ++  S  +     I +  +       R ++    A     +    
Sbjct: 290 TVDA----ADDFLDALAGVSEPERKRKIIGEKFIRTFEKAQRQVLEEAGARGKEVK---F 342

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +    +  PL  L K E   +  ++G 
Sbjct: 343 LVQGTLYPDVVESGGGDGAANIKSHHNVGGLPKDIKFQLIEPLRTLFKDEVRAIGTELGL 402

Query: 190 QDLV 193
            D +
Sbjct: 403 PDEI 406


>gi|323698543|ref|ZP_08110455.1| PP-loop domain protein [Desulfovibrio sp. ND132]
 gi|323458475|gb|EGB14340.1| PP-loop domain protein [Desulfovibrio desulfuricans ND132]
          Length = 305

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 26/112 (23%), Gaps = 8/112 (7%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
            +       L+  SGG+DS   +     +   V  L  D G             R+K+ +
Sbjct: 42  KMFTHEDRILVALSGGKDSLALMLELKLQGYDVTGLHIDLGI-----PNSSEKARRKVED 96

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII 114
                        +  +A  G                           R  +
Sbjct: 97  F---CTLHGLPLRVFEMAAWGLPIPDVKKYVKRPVCAVCGKMKRHHFNRIAV 145


>gi|317182294|dbj|BAJ60078.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Helicobacter pylori F57]
          Length = 508

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 52/180 (28%), Gaps = 16/180 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DS+   +       D +  +  D+G   K E E    + K +     +  
Sbjct: 211 KVLCAVSGGVDSTVVATLLHRAIKDNLIAVFVDHGLLRKNEKEKVQAMFKDL-----QIP 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  +   + L+ L  +S   L + +            F        L        ++  
Sbjct: 266 LNTIDAKEIFLSKLKGVSEPELKRKII----GETFIEVFEKEAKKHHLKG------KIEF 315

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   S         I+       L       +  PL  L K E   L +++G
Sbjct: 316 LAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEARLLGKELG 375


>gi|319790339|ref|YP_004151972.1| argininosuccinate synthase [Thermovibrio ammonificans HB-1]
 gi|317114841|gb|ADU97331.1| argininosuccinate synthase [Thermovibrio ammonificans HB-1]
          Length = 402

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
               +L +SGG D+S  + W  DR   V T + D GQ
Sbjct: 1  MGKRVVLAYSGGLDTSVIVRWLADRGFEVITYTADVGQ 38


>gi|291458778|ref|ZP_06598168.1| GMP synthase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291418695|gb|EFE92414.1| GMP synthase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 513

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 55/187 (29%), Gaps = 21/187 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +        ++  +  D+G            +RK   + +    
Sbjct: 217 KVLLALSGGVDSSVAATLLSKAIGRQLSCVFVDHG-----------LLRKYEGDEVEAVF 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            S G+     L  +   +     + +    +               F+      A ++G 
Sbjct: 266 GSTGKY---DLNFIRVNAGPLYLEKLKGVEEPEQKRRIIGER----FIRIFEQEAKKIGA 318

Query: 129 -TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-VHTPLMWLKKYETWKLAQD 186
              +  G    D           I++      L        +  PL  L K E  ++  +
Sbjct: 319 VDFLAQGTIYADVVESGLGNGAVIKSHHNVGGLPKNIEFRGIIEPLRDLFKDEVRRVGLE 378

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 379 LGLPESL 385


>gi|225857820|ref|YP_002739330.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase) [Streptococcus
           pneumoniae 70585]
 gi|254789049|sp|C1C992|TILS_STRP7 RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|225721931|gb|ACO17785.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase) [Streptococcus
           pneumoniae 70585]
          Length = 425

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 48/173 (27%), Gaps = 11/173 (6%)

Query: 6   KKAPSALLLFSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKI 60
           KK   A+L  SGG DS        ++  +    +     ++ QR +    E  L      
Sbjct: 17  KKHAKAVLALSGGLDSMFLFKVLSTYQKELEIELILAHVNHKQRIESDWEEKELRKLAAE 76

Query: 61  VELMPKWKDSLGED-----HILPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            EL     +  GE               ++   +  T  V     D+ +   F+      
Sbjct: 77  AELPIYISNFSGEFSEARARNFRYDFFQEVMKKTGATALVTAHHADDQVETIFMRLIRGT 136

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
            L + + +  +  +  I I      +                  N    + + 
Sbjct: 137 RLRYLSGIKEKQVVGEIEIIRPFLHFQKKDFPSIFHFEDTSNQENHYFRNRIR 189


>gi|255281218|ref|ZP_05345773.1| GMP synthase [Bryantella formatexigens DSM 14469]
 gi|255268175|gb|EET61380.1| GMP synthase [Bryantella formatexigens DSM 14469]
          Length = 514

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 50/190 (26%), Gaps = 22/190 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   L   SGG DSS           +++  +  D+G            +RK   + +  
Sbjct: 215 SGRVLCALSGGVDSSVAAVLLSKAVGEQLTCVFVDHG-----------LLRKNEGDEVEA 263

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G  ++  + +            V    +               F+      A ++
Sbjct: 264 VFGPKGPYNLNFIRVNAQQRFYDKLSGVTEPEKK-------RKIIGEEFIRVFEEEAKKI 316

Query: 127 GITNIV---IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           G  + +       +   SG                         +  PL  L K E  K 
Sbjct: 317 GAVDFLVQGTIYPDVVESGLGGESAVIKSHHNVGGLPDYVDFKEIIEPLRDLFKDEVRKA 376

Query: 184 AQDIGGQDLV 193
             ++G  + +
Sbjct: 377 GLELGIPENL 386


>gi|170725915|ref|YP_001759941.1| GMP synthase [Shewanella woodyi ATCC 51908]
 gi|226739737|sp|B1KLC1|GUAA_SHEWM RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|169811262|gb|ACA85846.1| GMP synthase, large subunit [Shewanella woodyi ATCC 51908]
          Length = 525

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 50/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS           D++  +  D G     E                +  D
Sbjct: 230 VILGLSGGVDSSVVAMLLHRAIGDKLTCVFVDNGLLRLNE--------------AQQVMD 275

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+   L +  +   +            +        V              A  L   
Sbjct: 276 MFGDHFGLNIVHVDAENRFLDAMAGEADPEAKRKIIGHVFVDIFDEESKKCVNAKWLAQG 335

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S         I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 336 TIYPDVIESAGSATGKAHV--IKSHHNVGGLPDDMEMGLVEPLRELFKDEVRKIGLELGL 393

Query: 190 Q 190
            
Sbjct: 394 P 394


>gi|108563408|ref|YP_627724.1| GMP synthase [Helicobacter pylori HPAG1]
 gi|123246942|sp|Q1CSM2|GUAA_HELPH RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|107837181|gb|ABF85050.1| GMP synthase [Helicobacter pylori HPAG1]
          Length = 508

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 55/184 (29%), Gaps = 20/184 (10%)

Query: 8   APSALLLFSGGQDSS---TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
               L   SGG DS+   T L  A+   D +  +  D+G   K E E    + K +    
Sbjct: 209 NDKVLCAVSGGVDSTVVATLLYRAIK--DNLIAVFVDHGLLRKNEKERVQAMFKDL---- 262

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            +   +  +   + L+ L  +S   L + +            F        L        
Sbjct: 263 -QIPLNTIDAKGIFLSKLKGVSEPELKRKII----GETFIEVFEKEAKKHHLKG------ 311

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           ++          +   S         I+       L       +  PL  L K E   L 
Sbjct: 312 KIEFLAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEARLLG 371

Query: 185 QDIG 188
           +++G
Sbjct: 372 KELG 375


>gi|15902054|ref|NP_357604.1| hypothetical protein spr0010 [Streptococcus pneumoniae R6]
 gi|116516781|ref|YP_815434.1| tRNA(Ile)-lysidine synthetase [Streptococcus pneumoniae D39]
 gi|61217356|sp|Q8DRP9|TILS_STRR6 RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|122279568|sp|Q04N53|TILS_STRP2 RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|15457538|gb|AAK98814.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
 gi|116077357|gb|ABJ55077.1| tRNA(Ile)-lysidine synthetase [Streptococcus pneumoniae D39]
          Length = 425

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 48/173 (27%), Gaps = 11/173 (6%)

Query: 6   KKAPSALLLFSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKI 60
           KK   A+L  SGG DS        ++  +    +     ++ QR +    E  L      
Sbjct: 17  KKHAKAVLALSGGLDSMFLFKVLSTYQKELEIELILAHVNHKQRIESDWEEKELRKLAAE 76

Query: 61  VELMPKWKDSLGED-----HILPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            EL     +  GE               ++   +  T  V     D+ +   F+      
Sbjct: 77  AELPIYISNFSGEFSEARARNFRYDFFQEVMKKTGATALVTAHHADDQVETIFMRLIRGT 136

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
            L + + +  +  +  I I      +                  N    + + 
Sbjct: 137 RLRYLSGIKEKQVVGEIEIIRPFLHFQKKDFPSIFHFEDTSNQENHYFRNRIR 189


>gi|57506130|ref|ZP_00372052.1| conserved hypothetical protein [Campylobacter upsaliensis RM3195]
 gi|57015614|gb|EAL52406.1| conserved hypothetical protein [Campylobacter upsaliensis RM3195]
          Length = 327

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD--YGQRNKVELECRLCVR 57
           AL LFSGG DS   +     +   V+ L+ +  +G R+    E R    
Sbjct: 2  KALALFSGGLDSLLAMKLITQQGIAVKALNINIGFGSRSDKSEEMRRRAA 51


>gi|15899960|ref|NP_344564.1| MesJ/Ycf62 family protein [Streptococcus pneumoniae TIGR4]
 gi|111658620|ref|ZP_01409270.1| hypothetical protein SpneT_02000210 [Streptococcus pneumoniae
           TIGR4]
 gi|61217410|sp|Q97TC5|TILS_STRPN RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|14971475|gb|AAK74204.1| tRNA(Ile)-lysidine synthetase [Streptococcus pneumoniae TIGR4]
 gi|301793336|emb|CBW35695.1| putative ATP-binding PP-loop family protein [Streptococcus
           pneumoniae INV104]
          Length = 425

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 48/173 (27%), Gaps = 11/173 (6%)

Query: 6   KKAPSALLLFSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKI 60
           KK   A+L  SGG DS        ++  +    +     ++ QR +    E  L      
Sbjct: 17  KKHAKAVLALSGGLDSMFLFKVLSTYQKELEIELILAHVNHKQRIESDWEEKELRKLAAE 76

Query: 61  VELMPKWKDSLGED-----HILPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            EL     +  GE               ++   +  T  V     D+ +   F+      
Sbjct: 77  AELPIYISNFSGEFSEARARNFRYDFFQEVMKKTGATALVTAHHADDQVETIFMRLIRGT 136

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
            L + + +  +  +  I I      +                  N    + + 
Sbjct: 137 RLRYLSGIKEKQVVGEIEIIRPFLHFQKKDFPSIFHFEDTSNQENHYFRNRIR 189


>gi|317473871|ref|ZP_07933151.1| tRNA methyl transferase [Bacteroides eggerthii 1_2_48FAA]
 gi|316909948|gb|EFV31622.1| tRNA methyl transferase [Bacteroides eggerthii 1_2_48FAA]
          Length = 365

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 48/177 (27%), Gaps = 7/177 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +L SGG DSS  +    ++  R        G+ +   ++C     + +       +    
Sbjct: 5   VLLSGGVDSSVVVHLLCEQGHRPSLFYIKIGKDDADYMDCS--AEEDLEMASAVARRYGL 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
              ++ L    +   +     +    +        +  + I F  F          T   
Sbjct: 63  SLEVVDLH--REYWDNVAAYAIDKVRRGLTPNPDVMCNKLIKFGCFERYAGKDFDFTATG 120

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLAQD 186
                   +G            +    L    ++ V     PL  L K E   +A  
Sbjct: 121 HYAATILQNGKVWLGTALDPVKDQTDFLAQIDYLQVSKLMFPLGGLMKQEVRDIALK 177


>gi|313205650|ref|YP_004044827.1| gmp synthase (glutamine-hydrolyzing) [Riemerella anatipestifer DSM
           15868]
 gi|312444966|gb|ADQ81321.1| GMP synthase (glutamine-hydrolyzing) [Riemerella anatipestifer DSM
           15868]
          Length = 509

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 50/187 (26%), Gaps = 18/187 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS            ++  +  D G   K E      V +        
Sbjct: 212 NQKVILGLSGGVDSSVAAVLIHKAIGSQLTCIFVDTGLLRKNE---AQKVMENYGSHFNL 268

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     + L    +   S L      + +   + N FV   +              
Sbjct: 269 N---------IKLIDASERFLSKLKGVSDPEQKRKIIGNEFVAVFDEESHKIEGAKFLAQ 319

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G         +   S         I++      L  +    +  PL  L K E  K+ ++
Sbjct: 320 G-----TIYPDVIESQSVKGPSAVIKSHHNVGGLPEDMEFELLEPLRELFKDEVRKVGEE 374

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 375 LGIPHHL 381


>gi|303326374|ref|ZP_07356817.1| ThiI family protein [Desulfovibrio sp. 3_1_syn3]
 gi|302864290|gb|EFL87221.1| ThiI family protein [Desulfovibrio sp. 3_1_syn3]
          Length = 386

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 16/36 (44%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
          +   P  ++LFSGG DS        D+  +V  L  
Sbjct: 22 MTATPDVIVLFSGGLDSILAAKLLEDQGLKVRCLHC 57


>gi|239998936|ref|ZP_04718860.1| tRNA(Ile)-lysidine synthase [Neisseria gonorrhoeae 35/02]
 gi|240014155|ref|ZP_04721068.1| tRNA(Ile)-lysidine synthase [Neisseria gonorrhoeae DGI18]
 gi|240016590|ref|ZP_04723130.1| tRNA(Ile)-lysidine synthase [Neisseria gonorrhoeae FA6140]
 gi|240080779|ref|ZP_04725322.1| tRNA(Ile)-lysidine synthase [Neisseria gonorrhoeae FA19]
 gi|240112854|ref|ZP_04727344.1| tRNA(Ile)-lysidine synthase [Neisseria gonorrhoeae MS11]
 gi|240117903|ref|ZP_04731965.1| tRNA(Ile)-lysidine synthase [Neisseria gonorrhoeae PID1]
 gi|240121717|ref|ZP_04734679.1| tRNA(Ile)-lysidine synthase [Neisseria gonorrhoeae PID24-1]
 gi|240123462|ref|ZP_04736418.1| tRNA(Ile)-lysidine synthase [Neisseria gonorrhoeae PID332]
 gi|240125707|ref|ZP_04738593.1| tRNA(Ile)-lysidine synthase [Neisseria gonorrhoeae SK-92-679]
 gi|240128163|ref|ZP_04740824.1| tRNA(Ile)-lysidine synthase [Neisseria gonorrhoeae SK-93-1035]
          Length = 411

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/190 (11%), Positives = 41/190 (21%), Gaps = 31/190 (16%)

Query: 15  FSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            SGG DS   L              E L   +G                           
Sbjct: 3   LSGGLDSVVLLHLLVCAGKRAGFVPEALHIHHG-----LSPRADDWADFCRNYCDMLGVG 57

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           L    +        I  ++  K  A   +           R+     F   +A   G+  
Sbjct: 58  LETVKVCVEKNGLGIEAAARQKRYAEFAEKGFDVLALAHHRDDQIETFMLAVARGGGLRA 117

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +                                    +  PL+   + + W  A+  G  
Sbjct: 118 LAAMPAVRPLGENGI----------------------IWRPLLPFSRQDIWDYARKHGLP 155

Query: 191 DLVNLILEES 200
           ++ +    ++
Sbjct: 156 NIEDESNTDT 165


>gi|229845165|ref|ZP_04465299.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus influenzae 6P18H1]
 gi|229811876|gb|EEP47571.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus influenzae 6P18H1]
          Length = 383

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 34/135 (25%), Gaps = 4/135 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 +   SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 22  NATKKVICGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 78

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     +             +  + I F  F    A  
Sbjct: 79  AVCDKLG-IKLHKINFAAEYWDNVFEHFLTEYKAGRTPNPDILCNKEIKFKAFLEYAAED 137

Query: 126 LGITNIVIGVCETDY 140
           L    I  G      
Sbjct: 138 LCADYIATGHYVRRT 152


>gi|225435460|ref|XP_002282827.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 540

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/186 (11%), Positives = 37/186 (19%), Gaps = 8/186 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS  L                   +   E     C  +  ++      D
Sbjct: 85  KIAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPWEDDLKYAKAVCD 144

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +     +         +         +      P+     R        A  +      
Sbjct: 145 QVDVPLEVVHLTDEYWKNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAISSKEFDYV 204

Query: 130 NIVIGVCETDYSGYPDCRH--------DTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
                            +                   +L       +  PL  + K E  
Sbjct: 205 ASGHYANVVHSFTDQMDKPSVLELSKDMVKDQTYFLSHLSQIQLKRLIFPLGCIPKDEVR 264

Query: 182 KLAQDI 187
            LA  +
Sbjct: 265 SLATKL 270


>gi|221636272|ref|YP_002524148.1| argininosuccinate synthase [Thermomicrobium roseum DSM 5159]
 gi|221157288|gb|ACM06406.1| argininosuccinate synthase [Thermomicrobium roseum DSM 5159]
          Length = 407

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVR 57
          M    K+    +L +SGG D+S  L W  +     V T++ D GQ   +       + 
Sbjct: 1  MTK--KRVNKVVLAYSGGLDTSVILKWIKETYGCEVITVTADVGQGEDLSGIEAKALA 56


>gi|187777280|ref|ZP_02993753.1| hypothetical protein CLOSPO_00832 [Clostridium sporogenes ATCC
          15579]
 gi|187774208|gb|EDU38010.1| hypothetical protein CLOSPO_00832 [Clostridium sporogenes ATCC
          15579]
          Length = 333

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 26/74 (35%), Gaps = 4/74 (5%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
          M   +     AL + SGG DS+       D+   V  + F    R+    E       K 
Sbjct: 1  MKRRVSLMTRALAMISGGLDSTLAAKLIKDQGIEVIGICF----RSYFFNEKNAERMTKQ 56

Query: 61 VELMPKWKDSLGED 74
          +++  +  D   + 
Sbjct: 57 IDIPLEVVDFSKKH 70


>gi|126179843|ref|YP_001047808.1| GMP synthase subunit B [Methanoculleus marisnigri JR1]
 gi|166215314|sp|A3CWS6|GUAAB_METMJ RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
          AltName: Full=GMP synthetase
 gi|125862637|gb|ABN57826.1| GMP synthase (glutamine-hydrolyzing) [Methanoculleus marisnigri
          JR1]
          Length = 305

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 8  APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELEC 52
              ++  SGG DSS C + A     D++  +  D G   K E + 
Sbjct: 21 EDKVVMALSGGVDSSVCAALATRAIGDQLVPIYVDTGLMRKGETDR 66


>gi|52548479|gb|AAU82328.1| PP-ATPase subunit of GMP synthase [uncultured archaeon GZfos14B8]
          Length = 310

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 1/60 (1%)

Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           A++  SGG DS+ C         DR+  +  D G   + E E  +   K       +  
Sbjct: 23 KAVIAVSGGVDSTVCAVLTHRAVGDRLVAVFIDDGLMREGEAEQVMNFFKARNMNARQVD 82


>gi|21282193|ref|NP_645281.1| hypothetical protein MW0464 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49485373|ref|YP_042594.1| hypothetical protein SAS0466 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|297207388|ref|ZP_06923827.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|300910347|ref|ZP_07127800.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           [Staphylococcus aureus subsp. aureus TCH70]
 gi|61217254|sp|Q6GBX9|TILS_STAAS RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|61217380|sp|Q8NXZ4|TILS_STAAW RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|21203629|dbj|BAB94329.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49243816|emb|CAG42241.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|296887951|gb|EFH26845.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|300888336|gb|EFK83523.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           [Staphylococcus aureus subsp. aureus TCH70]
          Length = 431

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 56/188 (29%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++  S G DS   L   L+ +      +  L  ++G R+    E              ++
Sbjct: 15  VVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEEA-------------RF 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +   E H + L I       SL +N +++ +       +      +        A+ L 
Sbjct: 62  LEVYCERHHIDLHIKKLDLSHSLDRNNSIQNEARIKRYEWFDEMMNVLEADVLLTAHHLD 121

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    + +   Y      + R       L       ++ PL+ + K E  +  +  
Sbjct: 122 --------DQLETIMYRIFNGKSTRNKLGFDELSKRKGYQIYRPLLAVSKKEIKQFQERY 173

Query: 188 GGQDLVNL 195
                 + 
Sbjct: 174 HIPYFEDE 181


>gi|226944910|ref|YP_002799983.1| tRNA-specific 2-thiouridylase MnmA [Azotobacter vinelandii DJ]
 gi|226719837|gb|ACO79008.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Azotobacter vinelandii DJ]
          Length = 372

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 34/135 (25%), Gaps = 5/135 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS      L +  +VE L     + +     C    ++ + +       
Sbjct: 8   RVIVGMSGGVDSSVSALLLLQQGYQVEGLFMKNWEEDDGTEYC--TAKEDLADAQAVCDR 65

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                H        +   +     +A            +  R  I        A  LG  
Sbjct: 66  IGMRLHT--ANFAAEYWDNVFEHFLAEYKAGRTPNPDILCNRE-IKFKAFLDYALSLGAD 122

Query: 130 NIVIGVCETDYSGYP 144
            I  G          
Sbjct: 123 MIATGHYVRRRDAED 137


>gi|307266314|ref|ZP_07547854.1| GMP synthase, large subunit [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918692|gb|EFN48926.1| GMP synthase, large subunit [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 512

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 54/185 (29%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DSS           D++  +  D G   K E +  +   +K         
Sbjct: 219 KAVCALSGGVDSSVAAVLVDRAIHDQLVCIFVDTGLLRKNEGDMVIETFRK--------- 269

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                D  +      D   S L      + +   + N F+       L          G 
Sbjct: 270 ---NYDMNIIRVDARDRFLSRLKGVTDPEEKRKIIGNVFIEVFKEEALKIGDVKFLVQGT 326

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
               +       S         I++      L  +    +  PL  L K E  ++ +++G
Sbjct: 327 LYPDVIESGNGVSST-------IKSHHNVGGLPEDIGFELIEPLRMLFKDEVRQVGKELG 379

Query: 189 GQDLV 193
             + +
Sbjct: 380 IPEEI 384


>gi|291544233|emb|CBL17342.1| GMP synthase (glutamine-hydrolyzing) [Ruminococcus sp. 18P13]
          Length = 554

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 25/69 (36%), Gaps = 1/69 (1%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
           + D I      LL  SGG DSS   +   +   +R+  +  D+G   K E +       K
Sbjct: 249 LRDQIGPDGRVLLALSGGVDSSVLAALLAEAIGERLTCVFVDHGLMRKNEGDEVEAAFAK 308

Query: 60  IVELMPKWK 68
                 +  
Sbjct: 309 WDVNFVRVN 317


>gi|225405420|ref|ZP_03760609.1| hypothetical protein CLOSTASPAR_04640 [Clostridium asparagiforme
           DSM 15981]
 gi|225043067|gb|EEG53313.1| hypothetical protein CLOSTASPAR_04640 [Clostridium asparagiforme
           DSM 15981]
          Length = 440

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/217 (12%), Positives = 57/217 (26%), Gaps = 23/217 (10%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
             + +     +L +SGG D++T + W  +     V     D GQ ++++         K+
Sbjct: 17  RRVFRMKEKVILAYSGGLDTTTIIPWLKENFGYEVICCCIDCGQGSELDGLDERA---KL 73

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                 + + L +D             + +   V       N                  
Sbjct: 74  SGASKLYIEDLVDD----------FCDNYIVPCVKANAVYENKYLLGTSMARPAIAKCLV 123

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            +A + G   I  G                  A +  I                  + + 
Sbjct: 124 DIARKEGAAAICHGATGKGNDQIRFELSIKSLAPDLKIIAPWRMTD----VWTLKSRDDE 179

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
            +  +  G    ++L      + Y   R+  +    G
Sbjct: 180 IEYCKQHG----IDLPFSM-DSSYSRDRNLWHVSHEG 211


>gi|218130411|ref|ZP_03459215.1| hypothetical protein BACEGG_02000 [Bacteroides eggerthii DSM 20697]
 gi|217987412|gb|EEC53742.1| hypothetical protein BACEGG_02000 [Bacteroides eggerthii DSM 20697]
          Length = 365

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 48/177 (27%), Gaps = 7/177 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +L SGG DSS  +    ++  R        G+ +   ++C     + +       +    
Sbjct: 5   VLLSGGVDSSVVVHLLCEQGHRPSLFYIKIGKDDADYMDCS--AEEDLEMASAVARRYGL 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
              ++ L    +   +     +    +        +  + I F  F          T   
Sbjct: 63  SLEVVDLH--REYWDNVAAYAIDKVRRGLTPNPDVMCNKLIKFGCFERYAGKDFDFTATG 120

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLAQD 186
                   +G            +    L    ++ V     PL  L K E   +A  
Sbjct: 121 HYAATILQNGKVWLGTALDPVKDQTDFLAQIDYLQVSKLMFPLGGLMKQEVRDIALK 177


>gi|189460122|ref|ZP_03008907.1| hypothetical protein BACCOP_00758 [Bacteroides coprocola DSM 17136]
 gi|189433164|gb|EDV02149.1| hypothetical protein BACCOP_00758 [Bacteroides coprocola DSM 17136]
          Length = 517

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 51/188 (27%), Gaps = 21/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS             +  +  D+G   K              E    
Sbjct: 213 NDKVVLGLSGGVDSSVAAVLLNKAIGKNLTCIFVDHGMLRK-------------NEFKNV 259

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D       +      +   S L      + +   +   F+         F        
Sbjct: 260 LHDYECLGLNVIGVDASEKFFSELAGVTEPERKRKIIGKGFIDV-------FDEEAHKIK 312

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +  +  G    D           I++      L  + ++ +  PL  L K E  ++ ++
Sbjct: 313 DVKWLAQGTIYPDCIESLSITGTVIKSHHNVGGLPEKMNLKLCEPLRLLFKDEVRRVGRE 372

Query: 187 IGGQDLVN 194
           +G  + + 
Sbjct: 373 LGMPEHLI 380


>gi|325128645|gb|EGC51514.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria meningitidis N1568]
          Length = 367

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 46/191 (24%), Gaps = 11/191 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN     +   ++  SGG DSS   +    +  +V  +     + +  +  C +      
Sbjct: 1   MNTTANPSN-IIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWEDDDNDEYCSIKQ---- 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +       +      + +          +      +      PN  V     I      
Sbjct: 56  -DSFDAIAVADIIGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLCNAEIKFKCFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A   G   I  G                              L          PL  L
Sbjct: 115 DYAVGQGADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLKPFQLERAIFPLGGL 174

Query: 176 KKYETWKLAQD 186
           +K E  +LA +
Sbjct: 175 EKPEVRRLAAE 185


>gi|228989434|ref|ZP_04149422.1| GMP synthase, large subunit [Bacillus pseudomycoides DSM 12442]
 gi|228995630|ref|ZP_04155295.1| GMP synthase, large subunit [Bacillus mycoides Rock3-17]
 gi|229003258|ref|ZP_04161091.1| GMP synthase, large subunit [Bacillus mycoides Rock1-4]
 gi|228757992|gb|EEM07204.1| GMP synthase, large subunit [Bacillus mycoides Rock1-4]
 gi|228764126|gb|EEM13008.1| GMP synthase, large subunit [Bacillus mycoides Rock3-17]
 gi|228770305|gb|EEM18881.1| GMP synthase, large subunit [Bacillus pseudomycoides DSM 12442]
          Length = 515

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 53/186 (28%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 221 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFHMN 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G                ++      + G   I++          G
Sbjct: 278 VIKVDAKERFMNKLKG---------------VEDPEQKRKIIGNEFIYVFDDEASRLE-G 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 322 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 381

Query: 188 GGQDLV 193
           G  D +
Sbjct: 382 GIPDEI 387


>gi|227824153|ref|YP_002828126.1| GMP synthase [Sinorhizobium fredii NGR234]
 gi|254800111|sp|C3MCS5|GUAA_RHISN RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|227343155|gb|ACP27373.1| glutamine-hydrolyzing GMP synthase [Sinorhizobium fredii NGR234]
          Length = 520

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 53/184 (28%), Gaps = 17/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS       +   D++  +  D+G      L  +      +      +
Sbjct: 223 KKVICALSGGVDSSVAALLIHEAVGDQLTCILVDHG------LMRKDEAANVVAMFQEHY 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              L          +G++   S         +        +              A  L 
Sbjct: 277 NLHLL-HIDASDRFIGELEGVSDP-------ETKRKIIGRLFIEVFEEEAKKLGGADFLA 328

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   V E+    +      TI++      L    ++ +  PL  L K E   L +++
Sbjct: 329 QGTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMNMQLVEPLRELFKDEVRVLGREL 386

Query: 188 GGQD 191
           G  +
Sbjct: 387 GLPE 390


>gi|257792258|ref|YP_003182864.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Eggerthella lenta DSM 2243]
 gi|257476155|gb|ACV56475.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Eggerthella lenta DSM 2243]
          Length = 352

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 54/193 (27%), Gaps = 22/193 (11%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS--FDYGQRNKVELECRLCVRKKIVE 62
           +  +    L  SGG DS+   +  +     V  ++  F      +        V  ++  
Sbjct: 1   MNASGRIALGMSGGVDSAVSAALLMRAGYEVVGVTCRFRDNAATERAAADAAAVCSQLG- 59

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +  +    +GE     +        + LT +  +           V              
Sbjct: 60  IRHEAPGCVGEFERCVVEPFVSSYAAGLTPSPCVGCNARCKMPALVRV------------ 107

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-------TVHTPLMWL 175
           A  LG   I  G            R    RA++   +      +        +  PL  +
Sbjct: 108 AGELGCDRIATGHYARIARLSDSGRFVVKRALDARKDQSYMLSLLSQEQLARLVLPLGAM 167

Query: 176 KKYETWKLAQDIG 188
            K E   +A D+G
Sbjct: 168 TKAEVRVIAADLG 180


>gi|192361469|ref|YP_001982951.1| tRNA-specific 2-thiouridylase MnmA [Cellvibrio japonicus Ueda107]
 gi|190687634|gb|ACE85312.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Cellvibrio japonicus Ueda107]
          Length = 378

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 44/184 (23%), Gaps = 10/184 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS        +   VE L       +     C    +  + +       
Sbjct: 20  KVIVGMSGGVDSSVSALLLQQQGYAVEGLFMKNWDEDDGTEYC--TAKADLADAQRVCDK 77

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              + H        +   +     +             +  R  I        A  LG  
Sbjct: 78  LGIKLHT--ANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFKVFMEYAQMLGGE 134

Query: 130 NIVIGVCETDYSGYPDC-----RHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            I  G                              +G         P+  L+K E  ++A
Sbjct: 135 LIATGHYVRRADRNGHTLLLKGLDPNKDQSYFLHAVGEAEFAKSLFPVGELEKPEVRRIA 194

Query: 185 QDIG 188
           ++ G
Sbjct: 195 EEHG 198


>gi|164659440|ref|XP_001730844.1| hypothetical protein MGL_1843 [Malassezia globosa CBS 7966]
 gi|159104742|gb|EDP43630.1| hypothetical protein MGL_1843 [Malassezia globosa CBS 7966]
          Length = 427

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
              LL +SGG D+ST L+W +D    V     + GQ
Sbjct: 6  NGRVLLAYSGGLDTSTILAWLIDEGYEVIAYMANVGQ 42


>gi|118781795|ref|XP_311863.3| AGAP003015-PA [Anopheles gambiae str. PEST]
 gi|189030949|sp|Q7PR38|ASSY_ANOGA RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|116129261|gb|EAA07894.4| AGAP003015-PA [Anopheles gambiae str. PEST]
          Length = 424

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 23/62 (37%), Gaps = 2/62 (3%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL +SGG D+S  L W L++   V     D GQ    +         KI       
Sbjct: 3  KEKVLLAYSGGLDTSCILKWLLEQDYEVICFMADVGQ--TEDFAAAREKALKIGAADVVV 60

Query: 68 KD 69
          KD
Sbjct: 61 KD 62


>gi|91204109|emb|CAJ71762.1| strongly similar to GMP synthase (glutamine-hydrolyzing)
           [Candidatus Kuenenia stuttgartiensis]
          Length = 516

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 61/197 (30%), Gaps = 23/197 (11%)

Query: 2   NDIIKK--APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
           NDI ++      +   SGG DS+   +       +R+  +  D G    +       V K
Sbjct: 210 NDINRQVGNGRVVCGLSGGVDSAVTAALIHKAIGNRLSCIFVDNG---LLRNFEAEEVVK 266

Query: 59  KIVELMPKWKDSLGEDHILP--LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
              E      +   + H++      LG +   S   +   K +        V       +
Sbjct: 267 TFKE------NFSADLHVVRAQDRFLGKLKGVS---DPEKKRKIIGHEFIKVFKNEAQKI 317

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
                LA      +++  +                ++      L  E    +  PL +L 
Sbjct: 318 SDVQFLAQGTLYPDVIESIPAHGGPTVTI------KSHHNVGGLPEELGFELVEPLRFLF 371

Query: 177 KYETWKLAQDIGGQDLV 193
           K E  K+ +++G    +
Sbjct: 372 KDEVRKIGEELGLPKEL 388


>gi|78357415|ref|YP_388864.1| hypothetical protein Dde_2372 [Desulfovibrio desulfuricans subsp.
          desulfuricans str. G20]
 gi|78219820|gb|ABB39169.1| conserved hypothetical protein [Desulfovibrio desulfuricans
          subsp. desulfuricans str. G20]
          Length = 357

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 22/40 (55%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
          M+D I++   AL L SGG DS   +    ++  RV+ L F
Sbjct: 1  MSDDIQQQYDALALLSGGLDSILAVKVVQEQGLRVKCLHF 40


>gi|313679661|ref|YP_004057400.1| argininosuccinate synthase [Oceanithermus profundus DSM 14977]
 gi|313152376|gb|ADR36227.1| argininosuccinate synthase [Oceanithermus profundus DSM 14977]
          Length = 396

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVR 57
            +L +SGG D+S  L W ++     V   + D GQ ++VE      + 
Sbjct: 2  KVVLAYSGGLDTSIILKWLIEEYGAEVIAFTADIGQGDEVEEAREKALA 50


>gi|312137387|ref|YP_004004724.1| pp-loop domain protein [Methanothermus fervidus DSM 2088]
 gi|311225106|gb|ADP77962.1| PP-loop domain protein [Methanothermus fervidus DSM 2088]
          Length = 297

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 2/70 (2%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKI 60
            +I+K    L+  SGG+DS              E L  D G  +  E+  +    +  +I
Sbjct: 42  RLIEKDEKLLVAVSGGKDSLVLAYILNKLGYEFEGLHIDLGIEDYSEMCKKSSKKIFSEI 101

Query: 61  VELMPKWKDS 70
              +   K  
Sbjct: 102 GLPLHIVKIK 111


>gi|227546020|ref|ZP_03976069.1| GMP synthase (glutamine-hydrolyzing) [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|227213654|gb|EEI81503.1| GMP synthase (glutamine-hydrolyzing) [Bifidobacterium longum subsp.
           infantis ATCC 55813]
          Length = 520

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 56/184 (30%), Gaps = 11/184 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+   +       D++  +  D+G   K E+E    V+   V        
Sbjct: 218 VICGLSGGVDSAVAAALVHKAIGDQLTCVFVDHGLLRKGEVE---QVKHDFVAATGIRLI 274

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++          L  ++  S  +     I +  +       R ++    A     +    
Sbjct: 275 TVDA----ADDFLDALAGVSEPERKRKIIGEKFIRTFEKAQRQVLEEAGARGKEVK---F 327

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +    +  PL  L K E   +  ++G 
Sbjct: 328 LVQGTLYPDVVESGGGDGAANIKSHHNVGGLPEDIKFQLIEPLRTLFKDEVRAIGTELGL 387

Query: 190 QDLV 193
            D +
Sbjct: 388 PDEI 391


>gi|225176011|ref|ZP_03730003.1| GMP synthase, large subunit [Dethiobacter alkaliphilus AHT 1]
 gi|225168599|gb|EEG77401.1| GMP synthase, large subunit [Dethiobacter alkaliphilus AHT 1]
          Length = 511

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 56/193 (29%), Gaps = 20/193 (10%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
            + + +    +   SGG DSS           DR+  +  D+G   K E      V +  
Sbjct: 210 RETVGEDEQVVCGLSGGVDSSVAAVLVHKAIGDRLTCIFVDHGLLRKNE---AEQVMETF 266

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                       E        LG +   +   +   K +        V  R    +    
Sbjct: 267 SGDFNMKVIKADEQ----DNFLGKL---AGVTDPEEKRKIIGNEFIRVFEREAAKIAQ-- 317

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
                  I  +V G   TD           I++      L  +    +  PL  L K E 
Sbjct: 318 -------IDYLVQGTLYTDVIESGTETAALIKSHHNVGGLPEDMKFKLIEPLNHLFKDEV 370

Query: 181 WKLAQDIGGQDLV 193
            K+ +++G    V
Sbjct: 371 RKVGEELGMPHDV 383


>gi|239621924|ref|ZP_04664955.1| GMP synthase [Bifidobacterium longum subsp. infantis CCUG 52486]
 gi|239515115|gb|EEQ54982.1| GMP synthase [Bifidobacterium longum subsp. infantis CCUG 52486]
          Length = 520

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 56/184 (30%), Gaps = 11/184 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+   +       D++  +  D+G   K E+E    V+   V        
Sbjct: 218 VICGLSGGVDSAVAAALVHKAIGDQLTCVFVDHGLLRKGEVE---QVKHDFVAATGIRLI 274

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++          L  ++  S  +     I +  +       R ++    A     +    
Sbjct: 275 TVDA----ADDFLDALAGVSEPERKRKIIGEKFIRTFEKAQRQVLEEAGARGKEVK---F 327

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +    +  PL  L K E   +  ++G 
Sbjct: 328 LVQGTLYPDVVESGGGDGAANIKSHHNVGGLPEDIKFQLIEPLRTLFKDEVRAIGTELGL 387

Query: 190 QDLV 193
            D +
Sbjct: 388 PDEI 391


>gi|167756430|ref|ZP_02428557.1| hypothetical protein CLORAM_01963 [Clostridium ramosum DSM 1402]
 gi|167703838|gb|EDS18417.1| hypothetical protein CLORAM_01963 [Clostridium ramosum DSM 1402]
          Length = 515

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 49/188 (26%), Gaps = 18/188 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS           +++  +  D+G   K E +    V          
Sbjct: 216 NGKVLCALSGGVDSSVAAVLLSKAIGNQLTCVFVDHGLLRKNEGDEVETV---------- 265

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G D    L  +   +     + +     +       + G   I +          
Sbjct: 266 ----FGPDGQYDLNFIRVNAQERYYEKLKGV--EEPEAKRKIIGEEFIRVFEEEAKKIGT 319

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLAQ 185
               +   +               I++      L        +  PL  L K E  K+  
Sbjct: 320 VDFLVQGTIYPDVVESGLGGESAVIKSHHNVGGLPDAVDFKEIIEPLRDLFKDEVRKVGL 379

Query: 186 DIGGQDLV 193
           ++G  + +
Sbjct: 380 ELGIPEYL 387


>gi|46190409|ref|ZP_00121545.2| COG0519: GMP synthase, PP-ATPase domain/subunit [Bifidobacterium
           longum DJO10A]
 gi|189439565|ref|YP_001954646.1| GMP synthase [Bifidobacterium longum DJO10A]
 gi|312132974|ref|YP_004000313.1| guaa1 [Bifidobacterium longum subsp. longum BBMN68]
 gi|322688874|ref|YP_004208608.1| GMP synthase/glutamine amidotransferase [Bifidobacterium longum
           subsp. infantis 157F]
 gi|322690849|ref|YP_004220419.1| GMP synthase/glutamine amidotransferase [Bifidobacterium longum
           subsp. longum JCM 1217]
 gi|189428000|gb|ACD98148.1| GMP synthase [Bifidobacterium longum DJO10A]
 gi|291517080|emb|CBK70696.1| GMP synthase (glutamine-hydrolyzing) [Bifidobacterium longum subsp.
           longum F8]
 gi|311773957|gb|ADQ03445.1| GuaA1 [Bifidobacterium longum subsp. longum BBMN68]
 gi|320455705|dbj|BAJ66327.1| GMP synthase/glutamine amidotransferase [Bifidobacterium longum
           subsp. longum JCM 1217]
 gi|320460210|dbj|BAJ70830.1| GMP synthase/glutamine amidotransferase [Bifidobacterium longum
           subsp. infantis 157F]
          Length = 520

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 56/184 (30%), Gaps = 11/184 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+   +       D++  +  D+G   K E+E    V+   V        
Sbjct: 218 VICGLSGGVDSAVAAALVHKAIGDQLTCVFVDHGLLRKGEVE---QVKHDFVAATGIRLI 274

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++          L  ++  S  +     I +  +       R ++    A     +    
Sbjct: 275 TVDA----ADDFLDALAGVSEPERKRKIIGEKFIRTFEKAQRQVLEEAGARGKEVK---F 327

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +    +  PL  L K E   +  ++G 
Sbjct: 328 LVQGTLYPDVVESGGGDGAANIKSHHNVGGLPEDIKFQLIEPLRTLFKDEVRAIGTELGL 387

Query: 190 QDLV 193
            D +
Sbjct: 388 PDEI 391


>gi|326390081|ref|ZP_08211643.1| PP-loop domain protein [Thermoanaerobacter ethanolicus JW 200]
 gi|325993946|gb|EGD52376.1| PP-loop domain protein [Thermoanaerobacter ethanolicus JW 200]
          Length = 300

 Score = 45.7 bits (106), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 17/42 (40%)

Query: 2  NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          N + KK    L++ SGG+DS             V  +  + G
Sbjct: 41 NKMFKKDDRVLVVVSGGKDSMALWDVLAKEGYNVVAMYINLG 82


>gi|319950723|ref|ZP_08024619.1| GMP synthase [Dietzia cinnamea P4]
 gi|319435601|gb|EFV90825.1| GMP synthase [Dietzia cinnamea P4]
          Length = 519

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 52/185 (28%), Gaps = 11/185 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+   +       DR+  +  D+G     E E          + +    
Sbjct: 216 RAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGEREQVE------NDFVAATG 269

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             L       + +      +       +  ++          + +            L  
Sbjct: 270 ARLITLDESDVFLGHLDGVTDPEAKRKIIGREFIRSFERAVTQALELQGEDGGSVDFLVQ 329

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+            I++      L  +   T+  PL  L K E   + + +G
Sbjct: 330 GTLYPDVVESGGGSGT----ANIKSHHNVGGLPDDVEFTLVEPLRLLFKDEVRAVGRALG 385

Query: 189 GQDLV 193
             + +
Sbjct: 386 LPETI 390


>gi|319891938|ref|YP_004148813.1| Argininosuccinate synthase [Staphylococcus pseudintermedius
          HKU10-03]
 gi|317161634|gb|ADV05177.1| Argininosuccinate synthase [Staphylococcus pseudintermedius
          HKU10-03]
 gi|323464971|gb|ADX77124.1| argininosuccinate synthase [Staphylococcus pseudintermedius ED99]
          Length = 400

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 17/37 (45%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
               +L +SGG D+S  + W +++   V     D G
Sbjct: 1  MKDKVVLAYSGGLDTSVAVKWLIEQGYDVIACCLDVG 37


>gi|221195808|ref|ZP_03568861.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Atopobium rimae ATCC 49626]
 gi|221184282|gb|EEE16676.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Atopobium rimae ATCC 49626]
          Length = 389

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 42/145 (28%), Gaps = 8/145 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M   +       L  SGG DS+   +  L++   V  +      ++     C       +
Sbjct: 1   METSM---DKVYLGMSGGVDSALSAALLLEQGFDVHAVYMRNWSKDLPGFHCP--WADDL 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +   +   SLG D  +           ++   +         PN  V     +     A
Sbjct: 56  AD-AERVAVSLGIDLAVW--DCEKEYKETVVDYLLDSYAHGYTPNPDVMCNQTVKFGTFA 112

Query: 121 TLAYRLGITNIVIGVCETDYSGYPD 145
             A+  G   I  G      SG  +
Sbjct: 113 KRAFSEGADYIATGHYARLASGEKN 137


>gi|213962597|ref|ZP_03390859.1| GMP synthase [Capnocytophaga sputigena Capno]
 gi|213954923|gb|EEB66243.1| GMP synthase [Capnocytophaga sputigena Capno]
          Length = 515

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 54/187 (28%), Gaps = 19/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DS+            ++  +  + G   K E E  L   + +   +  
Sbjct: 219 NEKVILGLSGGVDSTVAAVLLNKAIGKQLHCIFVNNGLLRKNEFESVLKQYEGMGLNVKG 278

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              S           L  ++          + ++       V            T A  L
Sbjct: 279 VDAST--------RFLSALAG-------KTEPEEKRKTIGRVFIEVFDDEAHKITDAQWL 323

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+     P      I++      L     + V  PL  L K E  ++ + 
Sbjct: 324 AQGTIYPDVIESLSVKGPSAT---IKSHHNVGGLPDYMKLKVVEPLRMLFKDEVRRVGRS 380

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 381 LGISDEL 387


>gi|212704763|ref|ZP_03312891.1| hypothetical protein DESPIG_02827 [Desulfovibrio piger ATCC
          29098]
 gi|212671826|gb|EEB32309.1| hypothetical protein DESPIG_02827 [Desulfovibrio piger ATCC
          29098]
          Length = 382

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
          M +  ++    ++LFSGG DS        ++  RV  L   
Sbjct: 16 MVNADQRPVDVVVLFSGGLDSILAAKVMEEQGLRVCCLHCH 56


>gi|167043534|gb|ABZ08230.1| putative GMP synthase C terminal domain protein [uncultured marine
           microorganism HF4000_APKG2J17]
          Length = 537

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 58/182 (31%), Gaps = 18/182 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +   +   +++  +  D G   + E +       ++VEL      
Sbjct: 242 VVLGLSGGVDSSVTAALLHEAIGEQLTCVFVDTGLMREGEGD-------QVVELFR---- 290

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              + + +PL             +     ++                      A  L   
Sbjct: 291 ---DHYNIPLIHRDAGDLFLDKLDGVTDPEEKRKIIGSTFIDVFEEEAAKVGDAEFLAQG 347

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   V E+    +      TI++      L     + +  PL  L K E   L +++G 
Sbjct: 348 TLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMKLKLVEPLRELFKDEVRALGRELGL 405

Query: 190 QD 191
            +
Sbjct: 406 PE 407


>gi|163782463|ref|ZP_02177461.1| DNA mismatch repair protein [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882496|gb|EDP76002.1| DNA mismatch repair protein [Hydrogenivirga sp. 128-5-R1-1]
          Length = 398

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 1/73 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMP 65
           A   +L +SGG D+S  + W  D+   V T + D GQ  +  E+  +      +  ++ 
Sbjct: 1  MAKRVVLAYSGGLDTSVIVRWLTDKGYEVITYTADVGQGEELAEIPDKARAAGAVEAIVE 60

Query: 66 KWKDSLGEDHILP 78
            K+    D  LP
Sbjct: 61 DIKEEFARDFCLP 73


>gi|145633601|ref|ZP_01789329.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus influenzae 3655]
 gi|229847290|ref|ZP_04467393.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus influenzae 7P49H1]
 gi|144985807|gb|EDJ92421.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus influenzae 3655]
 gi|229809833|gb|EEP45556.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Haemophilus influenzae 7P49H1]
          Length = 383

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 34/135 (25%), Gaps = 4/135 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 +   SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 22  NATKKVICGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 78

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     +             +  + I F  F    A  
Sbjct: 79  AVCDKLG-IKLHKINFAAEYWDNVFEHFLTEYKAGRTPNPDILCNKEIKFKAFLEYAAED 137

Query: 126 LGITNIVIGVCETDY 140
           L    I  G      
Sbjct: 138 LCADYIATGHYVRRT 152


>gi|121534431|ref|ZP_01666254.1| ExsB family protein [Thermosinus carboxydivorans Nor1]
 gi|121306924|gb|EAX47843.1| ExsB family protein [Thermosinus carboxydivorans Nor1]
          Length = 274

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/181 (12%), Positives = 45/181 (24%), Gaps = 34/181 (18%)

Query: 11  ALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A++ FSGG DS+   + A     ++V  ++       + E E    + + +         
Sbjct: 20  AVVAFSGGVDSTFLAAAAKRVLGEKVVAVTAVSPTSPQREQEDASRLAQVLE-------- 71

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 ILP   L     ++                                 A      
Sbjct: 72  --IAHFILPSGELDKQEFTANNPE-------------RCYFCKKERFGALVAWAQERNFH 116

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++      D + Y           +          V        + K E   L+++ G 
Sbjct: 117 WVIEASNADDLNDYRPGLRALRELAQ----------VRSPLLEAGMTKAEIRTLSREWGL 166

Query: 190 Q 190
            
Sbjct: 167 P 167


>gi|83592433|ref|YP_426185.1| PP-loop protein [Rhodospirillum rubrum ATCC 11170]
 gi|83575347|gb|ABC21898.1| PP-loop protein [Rhodospirillum rubrum ATCC 11170]
          Length = 462

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 5/52 (9%)

Query: 7  KAPSALLL-FSGGQDSSTCLS----WALDRFDRVETLSFDYGQRNKVELECR 53
          +   A+ +  SGG DS T L+    WA +R  R   + FD+G R     E R
Sbjct: 29 EPEPAIAVGVSGGVDSLTLLAFAARWAAERGGRCTAVCFDHGLRAASAGEAR 80


>gi|18977164|ref|NP_578521.1| hypothetical protein PF0792 [Pyrococcus furiosus DSM 3638]
 gi|18892817|gb|AAL80916.1| hypothetical protein PF0792 [Pyrococcus furiosus DSM 3638]
          Length = 536

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/196 (11%), Positives = 55/196 (28%), Gaps = 12/196 (6%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           ++    + ++  SGG DS    +           L   YG+ +  E+     V K +   
Sbjct: 193 LMANGDTIVIPLSGGYDSRAIATMLKKNGYENVILYT-YGKPDSTEVRVAREVAKNL--- 248

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
             +W      + I+              ++  ++       +         F+       
Sbjct: 249 EFEWIFVEQNEDIVDPDY--------PERDFFLEFYKYAFNHVSTIHLQDFFVFKHLHDN 300

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +   +I++     D+ G    R   I   +  +   +     +    + L  Y   K+
Sbjct: 301 SVIPKNSIIVPGHSGDFLGGSHLRKLPIPKSKRDVFNTILIKHYIVNEHIKLSPYVVKKI 360

Query: 184 AQDIGGQDLVNLILEE 199
            + +       L    
Sbjct: 361 NEYLNSFSEHTLPYSL 376


>gi|18977809|ref|NP_579166.1| hypothetical protein PF1437 [Pyrococcus furiosus DSM 3638]
 gi|18893558|gb|AAL81561.1| n-type ATP pyrophosphatase superfamily [Pyrococcus furiosus DSM
           3638]
          Length = 434

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 23/55 (41%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           +    ++ +SGG+DS+  L  A   FD V  +         +  E    V KK+ 
Sbjct: 230 QDKDVIVPWSGGKDSTAALILASKVFDDVTAVYVKMEYEMPLTDEYIEKVAKKLG 284


>gi|325134641|gb|EGC57281.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria meningitidis M13399]
 gi|325144816|gb|EGC67105.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria meningitidis M01-240013]
 gi|325205709|gb|ADZ01162.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria meningitidis M04-240196]
          Length = 367

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 46/191 (24%), Gaps = 11/191 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN     +   ++  SGG DSS   +    +  +V  +     + +  +  C +      
Sbjct: 1   MNTTANPSN-IIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWEDDDNDEYCSIKQ---- 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +       +      + +          +      +      PN  V     I      
Sbjct: 56  -DSFDAIAVADIIGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLCNAEIKFKCFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A   G   I  G                              L          PL  L
Sbjct: 115 DYAVGQGADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLKPFQLERAIFPLGGL 174

Query: 176 KKYETWKLAQD 186
           +K E  +LA +
Sbjct: 175 EKPEVRRLAAE 185


>gi|315653965|ref|ZP_07906881.1| GMP synthase [Lactobacillus iners ATCC 55195]
 gi|315488661|gb|EFU78307.1| GMP synthase [Lactobacillus iners ATCC 55195]
          Length = 517

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 57/187 (30%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +       D++  +  D+G   K E E      + +  L  +
Sbjct: 222 NKKVILGLSGGVDSSVTATLLHRAIGDQLTAIFVDHGMLRKNEAE------QVMAALNKE 275

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              ++ +       +      +   K   +  ++                 F        
Sbjct: 276 LGINIIKVDAADRFLSKLAGVTEPEKKRKIIGKEFIEV-------------FNEEAQKLK 322

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  +  G   TD          TI++      L  + H ++  PL  L K E   L + 
Sbjct: 323 DIDFLAQGTLYTDVIESGTNTAKTIKSHHNVGGLPKDMHFSLIEPLRKLFKDEVRVLGEK 382

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 383 LGLPHDL 389


>gi|297746327|emb|CBI16383.3| unnamed protein product [Vitis vinifera]
          Length = 544

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/186 (11%), Positives = 37/186 (19%), Gaps = 8/186 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS  L                   +   E     C  +  ++      D
Sbjct: 89  KIAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPWEDDLKYAKAVCD 148

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +     +         +         +      P+     R        A  +      
Sbjct: 149 QVDVPLEVVHLTDEYWKNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAISSKEFDYV 208

Query: 130 NIVIGVCETDYSGYPDCRH--------DTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
                            +                   +L       +  PL  + K E  
Sbjct: 209 ASGHYANVVHSFTDQMDKPSVLELSKDMVKDQTYFLSHLSQIQLKRLIFPLGCIPKDEVR 268

Query: 182 KLAQDI 187
            LA  +
Sbjct: 269 SLATKL 274


>gi|261392212|emb|CAX49726.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria meningitidis 8013]
          Length = 367

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 46/191 (24%), Gaps = 11/191 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN     +   ++  SGG DSS   +    +  +V  +     + +  +  C +      
Sbjct: 1   MNTTANPSN-IIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWEDDDNDEYCSIKQ---- 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +       +      + +          +      +      PN  V     I      
Sbjct: 56  -DSFDAIAVADIIGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLCNAEIKFKCFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A   G   I  G                              L          PL  L
Sbjct: 115 DYAVGQGADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLKPFQLERAIFPLGGL 174

Query: 176 KKYETWKLAQD 186
           +K E  +LA +
Sbjct: 175 EKPEVRRLAAE 185


>gi|240103250|ref|YP_002959559.1| hypothetical protein TGAM_1193 [Thermococcus gammatolerans EJ3]
 gi|239910804|gb|ACS33695.1| ATPase, putative, PP-loop superfamily [Thermococcus gammatolerans
          EJ3]
          Length = 206

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 4/69 (5%)

Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYG----QRNKVELECRLCVRKKIVELMPKWKD 69
          L+SGG+DSS            VE ++  +G     R   E   RL    +++EL  +  +
Sbjct: 9  LYSGGKDSSLAAWILSQLGYEVELVTVTFGLLDNWRYARETAERLGFPHRVLELPREILE 68

Query: 70 SLGEDHILP 78
            GE  I  
Sbjct: 69 KAGEIAISD 77


>gi|189462149|ref|ZP_03010934.1| hypothetical protein BACCOP_02831 [Bacteroides coprocola DSM 17136]
 gi|189431122|gb|EDV00107.1| hypothetical protein BACCOP_02831 [Bacteroides coprocola DSM 17136]
          Length = 378

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 50/186 (26%), Gaps = 5/186 (2%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           N I     +AL+  SGG DS+  +    ++  + +      G     EL C     + I 
Sbjct: 21  NKISPMNIAALI--SGGVDSAVAVHLLCEQGYKPDLFYIKIGMDTDNELSC--TAEEDIE 76

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                 +    +  I+ L         + T          N                 A 
Sbjct: 77  LATATARRYGLQLEIIDLQKEYWDQVVAYTIEKVRNGFTPNPDVMCNKLIKFGCFEQKAG 136

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM-WLKKYET 180
            AY    T      CE +   +     D I+     +       V+     +    K E 
Sbjct: 137 YAYDKIATGHYASTCELNGKTWLATAKDAIKDQTDFLAQINYLQVSKLLFPLGGYMKKEI 196

Query: 181 WKLAQD 186
             +A  
Sbjct: 197 RHIAAQ 202


>gi|167757683|ref|ZP_02429810.1| hypothetical protein CLOSCI_00012 [Clostridium scindens ATCC
          35704]
 gi|167664703|gb|EDS08833.1| hypothetical protein CLOSCI_00012 [Clostridium scindens ATCC
          35704]
          Length = 278

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 22/65 (33%), Gaps = 4/65 (6%)

Query: 8  APSALLLFSGGQDSSTCLSW----ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
              ++ FSGG DSS  L      AL    +V  +          + +    V ++I   
Sbjct: 20 KKDVIVAFSGGVDSSLLLKLACEAALKSNRKVYAVFLHTAMHPSGDAQSAKRVAEEIGAD 79

Query: 64 MPKWK 68
              K
Sbjct: 80 FRILK 84


>gi|15677407|ref|NP_274563.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria meningitidis MC58]
 gi|14195280|sp|Q9JYJ6|MNMA_NEIMB RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|7226803|gb|AAF41910.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria meningitidis MC58]
 gi|316983800|gb|EFV62780.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria meningitidis H44/76]
 gi|325199845|gb|ADY95300.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria meningitidis H44/76]
          Length = 367

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 46/191 (24%), Gaps = 11/191 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN     +   ++  SGG DSS   +    +  +V  +     + +  +  C +      
Sbjct: 1   MNTTANPSN-IIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWEDDDNDEYCSIKQ---- 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +       +      + +          +      +      PN  V     I      
Sbjct: 56  -DSFDAIAVADIIGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLCNAEIKFKCFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A   G   I  G                              L          PL  L
Sbjct: 115 DYAVGQGADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLKPFQLERAIFPLGGL 174

Query: 176 KKYETWKLAQD 186
           +K E  +LA +
Sbjct: 175 EKPEVRRLAAE 185


>gi|325294037|ref|YP_004279901.1| Argininosuccinate synthase [Agrobacterium sp. H13-3]
 gi|325061890|gb|ADY65581.1| Argininosuccinate synthase [Agrobacterium sp. H13-3]
          Length = 446

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 9/86 (10%)

Query: 1   MNDII---KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCV 56
           M+ I+   K     +L +SGG D+S  L W        V T + D GQ  ++E       
Sbjct: 36  MDIIMALPKDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEP--ARKK 93

Query: 57  RKKIV---ELMPKWKDSLGEDHILPL 79
            + +      +   ++    D + P+
Sbjct: 94  AELLGIKEIFVEDVREEFVRDFVFPM 119


>gi|317052068|ref|YP_004113184.1| argininosuccinate synthase [Desulfurispirillum indicum S5]
 gi|316947152|gb|ADU66628.1| argininosuccinate synthase [Desulfurispirillum indicum S5]
          Length = 407

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 2/45 (4%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQ 44
          M+         +L +SGG D+S  L W +  +   V   + D GQ
Sbjct: 1  MSKKTSVN-KVVLAYSGGLDTSVILKWLIKEYDCEVIAFTADLGQ 44


>gi|238028820|ref|YP_002913051.1| argininosuccinate synthase [Burkholderia glumae BGR1]
 gi|237878014|gb|ACR30347.1| Argininosuccinate synthase [Burkholderia glumae BGR1]
          Length = 446

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 25/67 (37%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + +       + FSGG D+S  L W   +       + + GQ ++ + +      ++   
Sbjct: 6  ESLPTGQKVGIAFSGGLDTSAALHWMRIKGAVPYAYTANLGQPDESDYDSIPQRAREYGA 65

Query: 63 LMPKWKD 69
             +  D
Sbjct: 66 ENARLID 72


>gi|228919192|ref|ZP_04082565.1| GMP synthase, large subunit [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228840470|gb|EEM85738.1| GMP synthase, large subunit [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 515

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 55/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 221 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFHMN 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       +  L  +              ++      + G   I++        + G
Sbjct: 278 VIKVDAKDRF-MDKLKGV--------------EDPEQKRKIIGNEFIYVFDDEASKLQ-G 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 322 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 381

Query: 188 GGQDLV 193
           G  D +
Sbjct: 382 GIPDEI 387


>gi|229107930|ref|ZP_04237560.1| GMP synthase, large subunit [Bacillus cereus Rock1-15]
 gi|228675528|gb|EEL30742.1| GMP synthase, large subunit [Bacillus cereus Rock1-15]
          Length = 515

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 55/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 221 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFHMN 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       +  L  +              ++      + G   I++        + G
Sbjct: 278 VIKVDAKDRF-MDKLKGV--------------EDPEQKRKIIGNEFIYVFDDEASKLQ-G 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 322 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 381

Query: 188 GGQDLV 193
           G  D +
Sbjct: 382 GIPDEI 387


>gi|229148655|ref|ZP_04276908.1| GMP synthase, large subunit [Bacillus cereus m1550]
 gi|229176849|ref|ZP_04304248.1| GMP synthase, large subunit [Bacillus cereus 172560W]
 gi|228606631|gb|EEK64053.1| GMP synthase, large subunit [Bacillus cereus 172560W]
 gi|228634816|gb|EEK91392.1| GMP synthase, large subunit [Bacillus cereus m1550]
          Length = 515

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 55/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 221 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFHMN 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       +  L  +              ++      + G   I++        + G
Sbjct: 278 VIKVDAKDRF-MDKLKGV--------------EDPEQKRKIIGNEFIYVFDDEASKLQ-G 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 322 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 381

Query: 188 GGQDLV 193
           G  D +
Sbjct: 382 GIPDEI 387


>gi|229188527|ref|ZP_04315569.1| GMP synthase, large subunit [Bacillus cereus ATCC 10876]
 gi|228594955|gb|EEK52732.1| GMP synthase, large subunit [Bacillus cereus ATCC 10876]
          Length = 515

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 55/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 221 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFHMN 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       +  L  +              ++      + G   I++        + G
Sbjct: 278 VIKVDAKDRF-MDKLKGV--------------EDPEQKRKIIGNEFIYVFDDEASKLQ-G 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 322 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 381

Query: 188 GGQDLV 193
           G  D +
Sbjct: 382 GIPDEI 387


>gi|254457083|ref|ZP_05070511.1| tRNA(Ile)-lysidine synthetase [Campylobacterales bacterium GD 1]
 gi|207085875|gb|EDZ63159.1| tRNA(Ile)-lysidine synthetase [Campylobacterales bacterium GD 1]
          Length = 333

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 51/178 (28%), Gaps = 9/178 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELM 64
           K    LL FSGG DS+      L +  + +    +Y +R +   E+E    +  K     
Sbjct: 11  KNKKNLLAFSGGADSTALFFLLLKQNIKFDIAIVNYNERVQSIKEVEYAKELASKYNLEC 70

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                   +      +   +I +    K ++    DN L    +  R    L+     A 
Sbjct: 71  HTLV--SPKISKNFESKAREIRYDFFEKLISEYGYDNLLTAHHLGDRFEWMLMQFCKGA- 127

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
             G   I           Y   R       +         ++        L   ET K
Sbjct: 128 --GCAEIAGMQKVQQREFYTLVRPLLHLDKQELYEYLGRDNIKYFEDETNLN--ETIK 181


>gi|218231195|ref|YP_002365095.1| GMP synthase [Bacillus cereus B4264]
 gi|226738385|sp|B7H4Q8|GUAA_BACC4 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|218159152|gb|ACK59144.1| GMP synthase [Bacillus cereus B4264]
          Length = 512

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 55/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 218 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFHMN 274

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       +  L  +              ++      + G   I++        + G
Sbjct: 275 VIKVDAKDRF-MDKLKGV--------------EDPEQKRKIIGNEFIYVFDDEASKLQ-G 318

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 319 MDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRVLGSEL 378

Query: 188 GGQDLV 193
           G  D +
Sbjct: 379 GIPDEI 384


>gi|154276466|ref|XP_001539078.1| hypothetical protein HCAG_06683 [Ajellomyces capsulatus NAm1]
 gi|150414151|gb|EDN09516.1| hypothetical protein HCAG_06683 [Ajellomyces capsulatus NAm1]
          Length = 410

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 24/65 (36%), Gaps = 2/65 (3%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          +       L +SGG D+S  L+W +++   V     D GQ    + +        I  L 
Sbjct: 1  MPAKQKVCLAYSGGLDTSCILTWLIEQGYDVVCFLADVGQ--AEDFKEAERKALSIGALK 58

Query: 65 PKWKD 69
              D
Sbjct: 59 LVVAD 63


>gi|121635213|ref|YP_975458.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria meningitidis FAM18]
 gi|166235071|sp|A1KUY0|MNMA_NEIMF RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|120866919|emb|CAM10679.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria meningitidis FAM18]
 gi|325130624|gb|EGC53368.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria meningitidis OX99.30304]
 gi|325132760|gb|EGC55443.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria meningitidis M6190]
 gi|325136777|gb|EGC59377.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria meningitidis M0579]
 gi|325138645|gb|EGC61204.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria meningitidis ES14902]
 gi|325204520|gb|ADY99973.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria meningitidis M01-240355]
          Length = 367

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 46/191 (24%), Gaps = 11/191 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN     +   ++  SGG DSS   +    +  +V  +     + +  +  C +      
Sbjct: 1   MNTTANPSN-IIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWEDDDNDEYCSIKQ---- 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +       +      + +          +      +      PN  V     I      
Sbjct: 56  -DSFDAIAVADIIGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLCNAEIKFKCFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A   G   I  G                              L          PL  L
Sbjct: 115 DYAVGQGADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLKPFQLERAIFPLGGL 174

Query: 176 KKYETWKLAQD 186
           +K E  +LA +
Sbjct: 175 EKPEVRRLAAE 185


>gi|329920354|ref|ZP_08277086.1| GMP synthase (glutamine-hydrolyzing) [Lactobacillus iners SPIN
           1401G]
 gi|328936030|gb|EGG32483.1| GMP synthase (glutamine-hydrolyzing) [Lactobacillus iners SPIN
           1401G]
          Length = 517

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 57/187 (30%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +       D++  +  D+G   K E E      + +  L  +
Sbjct: 222 NKKVILGLSGGVDSSVTATLLHRAIGDQLTAIFVDHGMLRKNEAE------QVMAALNKE 275

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              ++ +       +      +   +   +  ++                 F        
Sbjct: 276 LGINIIKVDAADRFLSKLAGVTEPERKRKIIGKEFIEV-------------FNEEAQKLK 322

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  +  G   TD          TI++      L  + H ++  PL  L K E   L + 
Sbjct: 323 DIDFLAQGTLYTDVIESGTNTAKTIKSHHNVGGLPKDMHFSLIEPLRKLFKDEVRVLGEK 382

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 383 LGLPHDL 389


>gi|319790392|ref|YP_004152025.1| protein of unknown function DUF814 [Thermovibrio ammonificans
          HB-1]
 gi|317114894|gb|ADU97384.1| protein of unknown function DUF814 [Thermovibrio ammonificans
          HB-1]
          Length = 329

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 24/77 (31%), Gaps = 1/77 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
          +   A LLFSGG DS        D   +V  +   Y      + +    +   +   +  
Sbjct: 2  EKKEAYLLFSGGLDSVIAAKLLQDMGFKVVGVHI-YSPLFGKDRKELQKLADILGIELKL 60

Query: 67 WKDSLGEDHILPLAILG 83
           +       IL     G
Sbjct: 61 VEAGDDYLQILSSPRYG 77


>gi|312871538|ref|ZP_07731631.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Lactobacillus iners LEAF 3008A-a]
 gi|311092933|gb|EFQ51284.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Lactobacillus iners LEAF 3008A-a]
          Length = 517

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 57/187 (30%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +       D++  +  D+G   K E E      + +  L  +
Sbjct: 222 NKKVILGLSGGVDSSVTATLLHRAIGDQLTAIFVDHGMLRKNEAE------QVMAALNKE 275

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              ++ +       +      +   +   +  ++                 F        
Sbjct: 276 LGINIIKVDAADRFLSKLAGVTEPERKRKIIGKEFIEV-------------FNEEAQKLK 322

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  +  G   TD          TI++      L  + H ++  PL  L K E   L + 
Sbjct: 323 DIDFLAQGTLYTDVIESGTNTAKTIKSHHNVGGLPKDMHFSLIEPLRKLFKDEVRVLGEK 382

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 383 LGLPHDL 389


>gi|312874903|ref|ZP_07734922.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Lactobacillus iners LEAF 2053A-b]
 gi|311089648|gb|EFQ48073.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Lactobacillus iners LEAF 2053A-b]
          Length = 517

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 55/187 (29%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +       D++  +  D+G   K E      V   + + +  
Sbjct: 222 NKKVILGLSGGVDSSVTATLLHRAIGDQLTAIFVDHGMLRKNE---AEQVMAALNKELGI 278

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +         + G        K +  +  +                VF        
Sbjct: 279 NIIKVDAAERFLSKLAGVTEPERKRKIIGKEFIE----------------VFNEEAQKLK 322

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  +  G   TD          TI++      L  + H ++  PL  L K E   L + 
Sbjct: 323 DIDFLAQGTLYTDVIESGTNTAKTIKSHHNVGGLPKDMHFSLIEPLRKLFKDEVRVLGEK 382

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 383 LGLPHDL 389


>gi|308389689|gb|ADO32009.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Neisseria meningitidis alpha710]
          Length = 367

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 46/191 (24%), Gaps = 11/191 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN     +   ++  SGG DSS   +    +  +V  +     + +  +  C +      
Sbjct: 1   MNTTANPSN-IIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWEDDDNDEYCSIKQ---- 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +       +      + +          +      +      PN  V     I      
Sbjct: 56  -DSFDAIAVADIIGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLCNAEIKFKCFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A   G   I  G                              L          PL  L
Sbjct: 115 DYAVGQGADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLKPFQLERAIFPLGGL 174

Query: 176 KKYETWKLAQD 186
           +K E  +LA +
Sbjct: 175 EKPEVRRLAAE 185


>gi|309809216|ref|ZP_07703086.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Lactobacillus iners SPIN 2503V10-D]
 gi|308170450|gb|EFO72473.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Lactobacillus iners SPIN 2503V10-D]
          Length = 517

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 57/187 (30%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +       D++  +  D+G   K E E      + +  L  +
Sbjct: 222 NKKVILGLSGGVDSSVTATLLHRAIGDQLTAIFVDHGMLRKNEAE------QVMAALNKE 275

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              ++ +       +      +   +   +  ++                 F        
Sbjct: 276 LGINIIKVDAADRFLSKLAGVTEPERKRKIIGKEFIEV-------------FNEEAQKLK 322

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  +  G   TD          TI++      L  + H ++  PL  L K E   L + 
Sbjct: 323 DIDFLAQGTLYTDVIESGTNTAKTIKSHHNVGGLPKDMHFSLIEPLRKLFKDEVRVLGEK 382

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 383 LGLPHDL 389


>gi|309808435|ref|ZP_07702334.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Lactobacillus iners LactinV 01V1-a]
 gi|312873911|ref|ZP_07733949.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Lactobacillus iners LEAF 2052A-d]
 gi|325913133|ref|ZP_08175503.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Lactobacillus iners UPII 60-B]
 gi|308168263|gb|EFO70382.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Lactobacillus iners LactinV 01V1-a]
 gi|311090587|gb|EFQ48993.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Lactobacillus iners LEAF 2052A-d]
 gi|325477554|gb|EGC80696.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Lactobacillus iners UPII 60-B]
          Length = 517

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 55/187 (29%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +       D++  +  D+G   K E      V   + + +  
Sbjct: 222 NKKVILGLSGGVDSSVTATLLHRAIGDQLTAIFVDHGMLRKNE---AEQVMAALNKELGI 278

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +         + G        K +  +  +                VF        
Sbjct: 279 NIIKVDAAERFLSKLAGVTEPERKRKIIGKEFIE----------------VFNEEAQKLK 322

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  +  G   TD          TI++      L  + H ++  PL  L K E   L + 
Sbjct: 323 DIDFLAQGTLYTDVIESGTNTAKTIKSHHNVGGLPKDMHFSLIEPLRKLFKDEVRVLGEK 382

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 383 LGLPHDL 389


>gi|309804587|ref|ZP_07698652.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Lactobacillus iners LactinV 09V1-c]
 gi|308165979|gb|EFO68197.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Lactobacillus iners LactinV 09V1-c]
          Length = 512

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 55/187 (29%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +       D++  +  D+G   K E      V   + + +  
Sbjct: 217 NKKVILGLSGGVDSSVTATLLHRAIGDQLTAIFVDHGMLRKNE---AEQVMAALNKELGI 273

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +         + G        K +  +  +                VF        
Sbjct: 274 NIIKVDAAERFLSKLAGVTEPERKRKIIGKEFIE----------------VFNEEAQKLK 317

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  +  G   TD          TI++      L  + H ++  PL  L K E   L + 
Sbjct: 318 DIDFLAQGTLYTDVIESGTNTAKTIKSHHNVGGLPKDMHFSLIEPLRKLFKDEVRVLGEK 377

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 378 LGLPHDL 384


>gi|309803793|ref|ZP_07697879.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Lactobacillus iners LactinV 11V1-d]
 gi|312872559|ref|ZP_07732627.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Lactobacillus iners LEAF 2062A-h1]
 gi|308164202|gb|EFO66463.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Lactobacillus iners LactinV 11V1-d]
 gi|311091921|gb|EFQ50297.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Lactobacillus iners LEAF 2062A-h1]
          Length = 517

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 55/187 (29%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +       D++  +  D+G   K E      V   + + +  
Sbjct: 222 NKKVILGLSGGVDSSVTATLLHRAIGDQLTAIFVDHGMLRKNE---AEQVMAALNKELGI 278

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +         + G        K +  +  +                VF        
Sbjct: 279 NIIKVDAAERFLSKLAGVTEPERKRKIIGKEFIE----------------VFNEEAQKLK 322

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  +  G   TD          TI++      L  + H ++  PL  L K E   L + 
Sbjct: 323 DIDFLAQGTLYTDVIESGTNTAKTIKSHHNVGGLPKDMHFSLIEPLRKLFKDEVRVLGEK 382

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 383 LGLPHDL 389


>gi|282859182|ref|ZP_06268304.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella bivia JCVIHMP010]
 gi|282588001|gb|EFB93184.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella bivia JCVIHMP010]
          Length = 386

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/183 (11%), Positives = 42/183 (22%), Gaps = 7/183 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K     +L SGG DSS  +          +      G       +C     + +      
Sbjct: 7   KDKKIAVLLSGGVDSSVVVWEFARLGLHPDCYYIKIGPEEAEAWDCSSE--EDLEMATAV 64

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +    +  ++      +         +             +  R I F  F     Y  
Sbjct: 65  CRRFECKLEVID--CHKEYWGQVTKYTMDKVKAGFTPNPDVMCNRLIKFGAFYEKKGYEY 122

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKL 183
            +             G            +    L       +     P+   +K E  ++
Sbjct: 123 DLIATGHYAQTKWIDGKKWLCTSPDPVKDQTDFLAQIYDWQLQKAIFPIGHYEKNEVREI 182

Query: 184 AQD 186
           A+ 
Sbjct: 183 AER 185


>gi|259500954|ref|ZP_05743856.1| GMP synthase [Lactobacillus iners DSM 13335]
 gi|302190594|ref|ZP_07266848.1| GMP synthase [Lactobacillus iners AB-1]
 gi|309806491|ref|ZP_07700495.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Lactobacillus iners LactinV 03V1-b]
 gi|259167648|gb|EEW52143.1| GMP synthase [Lactobacillus iners DSM 13335]
 gi|308167090|gb|EFO69265.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Lactobacillus iners LactinV 03V1-b]
          Length = 517

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 57/187 (30%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +       D++  +  D+G   K E E      + +  L  +
Sbjct: 222 NKKVILGLSGGVDSSVTATLLHRAIGDQLTAIFVDHGMLRKNEAE------QVMAALNKE 275

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              ++ +       +      +   +   +  ++                 F        
Sbjct: 276 LGINIIKVDAADRFLSKLAGVTEPERKRKIIGKEFIEV-------------FNEEAQKLK 322

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  +  G   TD          TI++      L  + H ++  PL  L K E   L + 
Sbjct: 323 DIDFLAQGTLYTDVIESGTNTAKTIKSHHNVGGLPKDMHFSLIEPLRKLFKDEVRVLGEK 382

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 383 LGLPHDL 389


>gi|294939504|ref|XP_002782503.1| asparagine synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239894109|gb|EER14298.1| asparagine synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 540

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 2/89 (2%)

Query: 13  LLFSGGQDSSTCLSWALDRFDR-VETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +LFSGG DS+T  + AL+  DR V+ L+     R+  +L   L   +++ E+  + +  L
Sbjct: 182 ILFSGGVDSTTLAALALEESDRQVDLLTASVDGRDSPDLRTALVSYQRLAEVYGRARVRL 241

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQD 100
                +  +  G         +  +   D
Sbjct: 242 I-LCGIDASDKGMYDRVMGLSSPEVTHMD 269


>gi|237714361|ref|ZP_04544842.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|229445525|gb|EEO51316.1| conserved hypothetical protein [Bacteroides sp. D1]
          Length = 353

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/184 (8%), Positives = 45/184 (24%), Gaps = 11/184 (5%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++  SGG DS+       ++   +  ++         E +    + +++        + +
Sbjct: 1   MVGMSGGIDSTATCLMLQEQGYEIVGVTMRVWGD---EPQDARELAERMGIEHYVADERI 57

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
                +    + +                  + N     R +         A+       
Sbjct: 58  PFKETIVKNFIDEYKQGRTPNP-------CVMCNPLFKFRVLTEWADKLNCAWVATGHYS 110

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
            +     +            ++      LG +       PL    K +  +   + G + 
Sbjct: 111 RLEEKNGNIYIVAGDDDKKDQSYF-LWRLGQDVLKRCIFPLGDYTKVKVREYLAEKGYEA 169

Query: 192 LVNL 195
               
Sbjct: 170 KSKE 173


>gi|228925317|ref|ZP_04088414.1| tRNA(Ile)-lysidine synthase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228834364|gb|EEM79904.1| tRNA(Ile)-lysidine synthase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 480

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 53/197 (26%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSW-----ALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           D++K+  + ++  SGG DS   L +     A  +F+ V     D    +    +      
Sbjct: 21  DVLKERSTIVVGVSGGPDSLALLYYLLEKRAAKQFEIVVA-HVD----HMFRGDESHEDL 75

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           + + +L            I           ++       +             R  + L 
Sbjct: 76  QFVQDLCKVLGVICETIRINVSQYQKQYGMNAQVAARECRYAFLERIMKKYDAR-YVALG 134

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                     +  +V G     Y+G    R                    +  PL+ + K
Sbjct: 135 HHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNG--------------YLIRPLLGVTK 180

Query: 178 YETWKLAQDIGGQDLVN 194
            E      ++     ++
Sbjct: 181 EEIVNYCNELKIIPRID 197


>gi|270284207|ref|ZP_05965742.2| argininosuccinate synthase [Bifidobacterium gallicum DSM 20093]
 gi|270277327|gb|EFA23181.1| argininosuccinate synthase [Bifidobacterium gallicum DSM 20093]
          Length = 427

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCV 56
          M+D  +     +L +SGG D+S  + +  DR    V  +S D GQ  +     +   
Sbjct: 12 MSDTAQDKNRIVLAYSGGLDTSVAIPYLKDRTGKDVVAVSLDVGQGGESLETIKERA 68


>gi|85860898|ref|YP_463100.1| GMP synthase [Syntrophus aciditrophicus SB]
 gi|85723989|gb|ABC78932.1| GMP synthase (glutamine-hydrolyzing) [Syntrophus aciditrophicus SB]
          Length = 510

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 51/183 (27%), Gaps = 17/183 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +L  SGG DSS           +++  +  D G   + E E    + K+         
Sbjct: 214 KVVLGLSGGVDSSVAALLLHQAIGNQLTCVFVDNGLLRQGEAEKVRSLFKQ----HFHMN 269

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                     L  L  I      + +  ++            R++ +L         +  
Sbjct: 270 VRFARAKAQFLDALKGIVDPERKRKIIGRVFVEVFDQEARKIRDVDYLAQGTLYPDVIES 329

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
            +   G                 ++      L     + +  PL  L K E   L +++G
Sbjct: 330 RSAFGGPSAVI------------KSHHNVGGLPRRMKLKLIEPLKHLFKDEVRLLGRELG 377

Query: 189 GQD 191
             D
Sbjct: 378 LSD 380


>gi|186682257|ref|YP_001865453.1| asparagine synthase [Nostoc punctiforme PCC 73102]
 gi|186464709|gb|ACC80510.1| asparagine synthase [Nostoc punctiforme PCC 73102]
          Length = 612

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 21/56 (37%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           +  SGG DSS   +  +    +V   + D+G     E      V + +   + K  
Sbjct: 249 VFLSGGLDSSVVAALLVQAGVKVRAYTLDFGDVGIPEYPYSEQVAQFLKIPLIKVA 304


>gi|330818553|ref|YP_004362258.1| Argininosuccinate synthase [Burkholderia gladioli BSR3]
 gi|327370946|gb|AEA62302.1| Argininosuccinate synthase [Burkholderia gladioli BSR3]
          Length = 447

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 25/67 (37%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + +       + FSGG D+S  L W   +       + + GQ ++ + +      ++   
Sbjct: 6  ESLPTGQKVGIAFSGGLDTSAALHWMRIKGAVPYAYTANLGQPDEADYDAIPQRAREYGA 65

Query: 63 LMPKWKD 69
             +  D
Sbjct: 66 ENARLID 72


>gi|307264980|ref|ZP_07546541.1| PP-loop domain protein [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919965|gb|EFN50178.1| PP-loop domain protein [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 300

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 17/42 (40%)

Query: 2  NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          N + KK    L++ SGG+DS             V  +  + G
Sbjct: 41 NKMFKKDDRVLVVVSGGKDSMALWDVLAKEGYNVVAMYINLG 82


>gi|212536961|ref|XP_002148636.1| argininosuccinate synthase [Penicillium marneffei ATCC 18224]
 gi|210068378|gb|EEA22469.1| argininosuccinate synthase [Penicillium marneffei ATCC 18224]
          Length = 416

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 25/66 (37%), Gaps = 5/66 (7%)

Query: 5  IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
          + K    + L +SGG D+S  L W +++   V     D GQ    +          I  +
Sbjct: 1  MAKPK--VCLAYSGGLDTSVILKWLIEQGYDVVAFMADVGQ--AEDFAAAEKKALAIGAV 56

Query: 64 MPKWKD 69
              +D
Sbjct: 57 KFVVED 62


>gi|158604919|gb|EAT98904.3| thiamine biosynthesis protein:ExsB [Campylobacter concisus 13826]
          Length = 329

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 22/60 (36%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           AL LFSGG DS   +    D+   V  L  D G     E    L  R  +     K  D
Sbjct: 2  KALALFSGGLDSMLSMKIISDQNIEVVALYMDTGFGVDEEKHEVLRRRAALAGASLKVVD 61


>gi|145628768|ref|ZP_01784568.1| DNA mismatch repair protein [Haemophilus influenzae 22.1-21]
 gi|144979238|gb|EDJ88924.1| DNA mismatch repair protein [Haemophilus influenzae 22.1-21]
          Length = 397

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 8/84 (9%)

Query: 1  MNDIIKKAPSA-----LLLFSGGQDSSTCL---SWALDRFDRVETLSFDYGQRNKVELEC 52
          ++DI K+   A     L+  SGG DS+  L   +    +   +  LS      +      
Sbjct: 4  LSDIEKQLQKATAQAFLVALSGGLDSTVLLSLFAKLRQKQPHLPPLSVRAIHIHHGLSPN 63

Query: 53 RLCVRKKIVELMPKWKDSLGEDHI 76
               K   +L  +++  L  + +
Sbjct: 64 ADSWAKHCQDLCDQFQIPLIIERV 87


>gi|21231412|ref|NP_637329.1| tRNA-specific 2-thiouridylase MnmA [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66768534|ref|YP_243296.1| tRNA-specific 2-thiouridylase MnmA [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|188991657|ref|YP_001903667.1| tRNA-specific 2-thiouridylase MnmA [Xanthomonas campestris pv.
           campestris str. B100]
 gi|24638306|sp|Q8P9A1|MNMA_XANCP RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|81305494|sp|Q4UUJ7|MNMA_XANC8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205829008|sp|B0RT32|MNMA_XANCB RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|21113079|gb|AAM41253.1| tRNA methyltransferase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66573866|gb|AAY49276.1| tRNA methyltransferase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|167733417|emb|CAP51618.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           methyltransferase [Xanthomonas campestris pv.
           campestris]
          Length = 378

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 45/188 (23%), Gaps = 11/188 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            P  ++  SGG DSS          + +  L       +          R+  V +    
Sbjct: 3   TPRTIVGVSGGVDSSVAAWKLAQDGEPIAGLFMQNWADDGSGDCRAEDDRRDAVAVCGVL 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                               S + ++   +      PN  V     +        A  LG
Sbjct: 63  GIP------FHFRDFSGEYWSGVFEHFLAEYAAGRTPNPDVLCNREVKFKHFLEAAQALG 116

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G            R                 LG         P+  L+K    +
Sbjct: 117 AERIATGHYARVAHLGGRWRLLRGADRNKDQSYFLHQLGQSQLAATLFPIGELEKSALRR 176

Query: 183 LAQDIGGQ 190
           +AQD G  
Sbjct: 177 IAQDAGLP 184


>gi|331084380|ref|ZP_08333484.1| argininosuccinate synthase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|330401644|gb|EGG81225.1| argininosuccinate synthase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 408

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 60/215 (27%), Gaps = 29/215 (13%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNK---VELECRLCVRKKIVE 62
                +L +SGG D++  + W  + F   V     + GQ ++   +E    L    K+  
Sbjct: 1   MKEKVILAYSGGLDTTALIPWLKENFDYEVICCCINCGQGSELDGLEERAALSGASKL-- 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
            +    D   +D+I+P    G +                N                   +
Sbjct: 59  YIEDIVDEFCDDYIVPCVQAGAVY--------------ENKYLLGTSMARPPIAKKLVKI 104

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A + G   I  G                  A +  I +       V T      + E   
Sbjct: 105 ARKEGAVAICHGATGKGNDQIRFELGIKALAPDLKI-IAPWRMTDVWTMQSREDEME--- 160

Query: 183 LAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
                     ++L    S++ Y   R+  +    G
Sbjct: 161 ----YCKAHGIDLPFNMSNS-YSRDRNLWHISHEG 190


>gi|325926475|ref|ZP_08187795.1| argininosuccinate synthase [Xanthomonas perforans 91-118]
 gi|325543124|gb|EGD14567.1| argininosuccinate synthase [Xanthomonas perforans 91-118]
          Length = 412

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 24/59 (40%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +L FSGG D+S C+ +  +R   V T+  D G  +  E E       ++      
Sbjct: 18 TKDIVLAFSGGLDTSFCIPYLQERGYAVHTVFADTGGVDAEEREFIEKRAAELGAASHV 76


>gi|295705537|ref|YP_003598612.1| hypothetical protein BMD_3422 [Bacillus megaterium DSM 319]
 gi|294803196|gb|ADF40262.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
          Length = 269

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 2/69 (2%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRK 58
          +  I++   S ++ FSGG DS+  L  A++    + V  ++ D       ELE    + +
Sbjct: 9  LTSILRDMESVVVAFSGGVDSTFLLKVAVETLGNENVIAVTADSETYPSSELEEAKVLAR 68

Query: 59 KIVELMPKW 67
          +I       
Sbjct: 69 QIGVRHQII 77


>gi|294500187|ref|YP_003563887.1| hypothetical protein BMQ_3431 [Bacillus megaterium QM B1551]
 gi|294350124|gb|ADE70453.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
          Length = 269

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 2/69 (2%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRK 58
          +  I++   S ++ FSGG DS+  L  A++    + V  ++ D       ELE    + +
Sbjct: 9  LTSILRDMESVVVAFSGGVDSTFLLKVAVETLGNENVIAVTADSETYPSSELEEAKVLAR 68

Query: 59 KIVELMPKW 67
          +I       
Sbjct: 69 QIGVRHQII 77


>gi|294665912|ref|ZP_06731178.1| argininosuccinate synthase [Xanthomonas fuscans subsp.
          aurantifolii str. ICPB 10535]
 gi|292604316|gb|EFF47701.1| argininosuccinate synthase [Xanthomonas fuscans subsp.
          aurantifolii str. ICPB 10535]
          Length = 413

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 24/59 (40%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +L FSGG D+S C+ +  +R   V T+  D G  +  E E       ++      
Sbjct: 19 TKDIVLAFSGGLDTSFCIPYLQERGYAVHTVFADTGGVDAEEREFIEKRAAELGAASHV 77


>gi|289671263|ref|ZP_06492338.1| argininosuccinate synthase [Xanthomonas campestris pv. musacearum
          NCPPB4381]
          Length = 412

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 24/59 (40%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +L FSGG D+S C+ +  +R   V T+  D G  +  E E       ++      
Sbjct: 18 TKDIVLAFSGGLDTSFCIPYLQERGYAVHTVFADTGGVDAEEREFIEKRAAELGAASHV 76


>gi|289665725|ref|ZP_06487306.1| argininosuccinate synthase [Xanthomonas campestris pv. vasculorum
          NCPPB702]
          Length = 412

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 24/59 (40%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +L FSGG D+S C+ +  +R   V T+  D G  +  E E       ++      
Sbjct: 18 TKDIVLAFSGGLDTSFCIPYLQERGYAVHTVFADTGGVDAEEREFIEKRAAELGAASHV 76


>gi|257054547|ref|YP_003132379.1| GMP synthase [Saccharomonospora viridis DSM 43017]
 gi|256584419|gb|ACU95552.1| GMP synthase (glutamine-hydrolyzing) [Saccharomonospora viridis DSM
           43017]
          Length = 514

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 52/184 (28%), Gaps = 16/184 (8%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A+   SGG DS+   +       DR+  +  D+G      L       +   + +     
Sbjct: 217 AICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHG------LLRAGERAQVERDFVAATGV 270

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            L            +   S+L      + +   +   F+              A      
Sbjct: 271 KLVT------VDASERFLSALAGVTDPEQKRKIIGREFIRVFEQ---AARDVKAAGDVEF 321

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +   T+  PL  L K E  ++  ++G 
Sbjct: 322 LVQGTLYPDVVESGGGAGTSNIKSHHNVGGLPDDLQFTLVEPLRMLFKDEVRRVGLELGL 381

Query: 190 QDLV 193
            + +
Sbjct: 382 PETI 385


>gi|225175457|ref|ZP_03729452.1| asparagine synthase [Dethiobacter alkaliphilus AHT 1]
 gi|225169209|gb|EEG78008.1| asparagine synthase [Dethiobacter alkaliphilus AHT 1]
          Length = 483

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 24/55 (43%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  SGG DSS  L+ A +    +   +  + +R+  +LE    +  ++      +
Sbjct: 206 VALSGGLDSSIILAVAREFDKDIAAFTATFAERHGEDLEYAKLLADQLGVDHHIY 260


>gi|166712433|ref|ZP_02243640.1| argininosuccinate synthase [Xanthomonas oryzae pv. oryzicola
          BLS256]
          Length = 413

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 24/59 (40%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +L FSGG D+S C+ +  +R   V T+  D G  +  E E       ++      
Sbjct: 19 TKDIVLAFSGGLDTSFCIPYLQERGYAVHTVFADTGGVDAEEREFIEKRAAELGAASHV 77


>gi|58582298|ref|YP_201314.1| argininosuccinate synthase [Xanthomonas oryzae pv. oryzae
          KACC10331]
 gi|58426892|gb|AAW75929.1| argininosuccinate synthase [Xanthomonas oryzae pv. oryzae
          KACC10331]
          Length = 413

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 24/59 (40%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +L FSGG D+S C+ +  +R   V T+  D G  +  E E       ++      
Sbjct: 19 TKDIVLAFSGGLDTSFCIPYLQERGYAVHTVFADTGGVDAEEREFIEKRAAELGAASHV 77


>gi|84624178|ref|YP_451550.1| argininosuccinate synthase [Xanthomonas oryzae pv. oryzae MAFF
          311018]
 gi|188576219|ref|YP_001913148.1| argininosuccinate synthase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|84368118|dbj|BAE69276.1| argininosuccinate synthase [Xanthomonas oryzae pv. oryzae MAFF
          311018]
 gi|188520671|gb|ACD58616.1| argininosuccinate synthase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 413

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 24/59 (40%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +L FSGG D+S C+ +  +R   V T+  D G  +  E E       ++      
Sbjct: 19 TKDIVLAFSGGLDTSFCIPYLQERGYAVHTVFADTGGVDAEEREFIEKRAAELGAASHV 77


>gi|78048106|ref|YP_364281.1| argininosuccinate synthase [Xanthomonas campestris pv.
          vesicatoria str. 85-10]
 gi|78036536|emb|CAJ24227.1| argininosuccinate synthase [Xanthomonas campestris pv.
          vesicatoria str. 85-10]
          Length = 411

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 24/59 (40%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +L FSGG D+S C+ +  +R   V T+  D G  +  E E       ++      
Sbjct: 17 TKDIVLAFSGGLDTSFCIPYLQERGYAVHTVFADTGGVDAEEREFIEKRAAELGAASHV 75


>gi|21243085|ref|NP_642667.1| argininosuccinate synthase [Xanthomonas axonopodis pv. citri str.
          306]
 gi|24211494|sp|Q8PK26|ASSY_XANAC RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|21108600|gb|AAM37203.1| argininosuccinate synthase [Xanthomonas axonopodis pv. citri str.
          306]
          Length = 412

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 24/59 (40%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +L FSGG D+S C+ +  +R   V T+  D G  +  E E       ++      
Sbjct: 18 TKDIVLAFSGGLDTSFCIPYLQERGYAVHTVFADTGGVDAEEREFIEKRAAELGAASHV 76


>gi|303244156|ref|ZP_07330494.1| tRNA methyl transferase-like protein [Methanothermococcus
          okinawensis IH1]
 gi|302485541|gb|EFL48467.1| tRNA methyl transferase-like protein [Methanothermococcus
          okinawensis IH1]
          Length = 198

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 16/35 (45%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
              +LFSGG+DSS             E ++ ++G
Sbjct: 2  EKVHVLFSGGKDSSLSAILLKKLGYEPELITVNFG 36


>gi|288800193|ref|ZP_06405652.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidine synthetase)
          (tRNA(Ile)-2-lysyl-cytidine synthase) [Prevotella sp.
          oral taxon 299 str. F0039]
 gi|288333441|gb|EFC71920.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidine synthetase)
          (tRNA(Ile)-2-lysyl-cytidine synthase) [Prevotella sp.
          oral taxon 299 str. F0039]
          Length = 444

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 23/64 (35%), Gaps = 1/64 (1%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          +++ K    L+  SGG DS   L         VE    ++  R + E +      K +  
Sbjct: 14 ELMSKNQLYLVALSGGADSVALLLVLKRLGYNVEAAHCNFHLRGE-ESDRDEDFCKDLCR 72

Query: 63 LMPK 66
           +  
Sbjct: 73 ELDI 76


>gi|284048040|ref|YP_003398379.1| GMP synthase, large subunit [Acidaminococcus fermentans DSM 20731]
 gi|283952261|gb|ADB47064.1| GMP synthase, large subunit [Acidaminococcus fermentans DSM 20731]
          Length = 514

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 52/186 (27%), Gaps = 19/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            + L   SGG DSS            ++  +  D+G   K E +    V K+        
Sbjct: 219 KNVLCAMSGGVDSSVAAVLVHKAVGKQLTCVFVDHGLLRKDEGDQVEQVFKR-------- 270

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                 D  + L  +                +           R              L 
Sbjct: 271 ------DFDMNLIRVNAQDRFLSKLKGVSDPEKKRKIIGEEFIRVFEEESKKIGHVDFLV 324

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I   V E+  +G       TI++      L  +  + +  PL  L K E   + +++
Sbjct: 325 QGTIYPDVVESGGTG----TSATIKSHHNVGGLPKDMKLGLIEPLRELFKDEVRAVGEEL 380

Query: 188 GGQDLV 193
           G    +
Sbjct: 381 GIPSEL 386


>gi|190348444|gb|EDK40897.2| hypothetical protein PGUG_04995 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 412

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/178 (10%), Positives = 52/178 (29%), Gaps = 2/178 (1%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++  S G DSS   +    ++  V  +      +     E      ++I E +    + +
Sbjct: 51  VVAMSSGVDSSVAAAIYAKKYKNVRGIYMANWSQTAKCTEADWKDVQRICEQIQIPCERV 110

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
             +      +   +  +             N    F      +  +      + L   + 
Sbjct: 111 NFEREYWSDVFQPMISAYQEGLTPNPDVGCNKYVKFGKMVEHLGAMLGKDRKWWLVTGHY 170

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYETWKLAQDI 187
              +   +   +   R       ++     +   +   V  P+  + K E  ++A+D+
Sbjct: 171 ARIMKNENTQRFSLLRGLYPNKDQSYYLSMVPYSILSNVLMPIGHMTKPEVRQIAKDL 228


>gi|146414139|ref|XP_001483040.1| hypothetical protein PGUG_04995 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 412

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/178 (10%), Positives = 52/178 (29%), Gaps = 2/178 (1%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++  S G DSS   +    ++  V  +      +     E      ++I E +    + +
Sbjct: 51  VVAMSSGVDSSVAAAIYAKKYKNVRGIYMANWSQTAKCTEADWKDVQRICEQIQIPCERV 110

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
             +      +   +  +             N    F      +  +      + L   + 
Sbjct: 111 NFEREYWSDVFQPMISAYQEGLTPNPDVGCNKYVKFGKMVEHLGAMLGKDRKWWLVTGHY 170

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV--TVHTPLMWLKKYETWKLAQDI 187
              +   +   +   R       ++     +   +   V  P+  + K E  ++A+D+
Sbjct: 171 ARIMKNENTQRFSLLRGLYPNKDQSYYLSMVPYSILSNVLMPIGHMTKPEVRQIAKDL 228


>gi|52079121|ref|YP_077912.1| GMP synthase [Bacillus licheniformis ATCC 14580]
 gi|52784488|ref|YP_090317.1| GMP synthase [Bacillus licheniformis ATCC 14580]
 gi|319647105|ref|ZP_08001331.1| GMP synthase [Bacillus sp. BT1B_CT2]
 gi|81386308|sp|Q65MU0|GUAA_BACLD RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|52002332|gb|AAU22274.1| GMP synthetase [Bacillus licheniformis ATCC 14580]
 gi|52346990|gb|AAU39624.1| GuaA [Bacillus licheniformis ATCC 14580]
 gi|317390929|gb|EFV71730.1| GMP synthase [Bacillus sp. BT1B_CT2]
          Length = 513

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 54/187 (28%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E E                
Sbjct: 219 KQVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGEAE---------------- 262

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL- 126
               G           ++           K++  + P          F+      A +L 
Sbjct: 263 ----GVMKTFSEGFNMNVIKVDAKDRFLNKLKGVSDPEQKRKIIGNEFIYVFDDEAEKLK 318

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI  +  G   TD          TI++      L  +    +  PL  L K E   L  +
Sbjct: 319 GIDFLAQGTLYTDIIESGTATAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRALGTE 378

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 379 LGIPDEI 385


>gi|307637706|gb|ADN80156.1| GMP synthase [Helicobacter pylori 908]
 gi|325996309|gb|ADZ51714.1| GMP synthase [Helicobacter pylori 2018]
 gi|325997898|gb|ADZ50106.1| GMP synthase [Helicobacter pylori 2017]
          Length = 508

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 51/180 (28%), Gaps = 16/180 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DS+   +       D +  +  D+G   K E E    + K +     K  
Sbjct: 211 KVLCAVSGGVDSTVVATLLHRAIKDNLIAVFVDHGLLRKNEKEKVQAMFKDL-----KIP 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               +   + L+ L  +S   L + +            F        L        ++  
Sbjct: 266 LDTIDAKEIFLSKLKGVSEPELKRKII----GETFIEVFEKEAKKHHLKG------KIEF 315

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   S         I+       L       +  PL  L K E   L +++G
Sbjct: 316 LAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEARLLGKELG 375


>gi|304389966|ref|ZP_07371923.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mobiluncus curtisii subsp. curtisii ATCC 35241]
 gi|304326859|gb|EFL94100.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mobiluncus curtisii subsp. curtisii ATCC 35241]
          Length = 409

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 40/141 (28%), Gaps = 7/141 (4%)

Query: 5   IKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSFDY--GQRNKVELECRLCVRKKI 60
           +++      L+  SGG DS+   +        V           R              +
Sbjct: 1   MRRKNLAKILVGLSGGVDSAVATARLQAAGHEVSGFFMQLESPSRPWSRPVTSAEPVDAL 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +   +  D LG +  +    L +  +  +  +     +D   PN  V     I   +  
Sbjct: 61  AD-AHRVADFLGVELQVW--DLAERFNRVVMDSFVQAYRDGLTPNPCVHCNRFIKFGYVI 117

Query: 121 TLAYRLGITNIVIGVCETDYS 141
             A R G   +  G     + 
Sbjct: 118 ERARREGFDYVATGHYARLWR 138


>gi|299136470|ref|ZP_07029653.1| argininosuccinate synthase [Acidobacterium sp. MP5ACTX8]
 gi|298600985|gb|EFI57140.1| argininosuccinate synthase [Acidobacterium sp. MP5ACTX8]
          Length = 446

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALHWMKQKGALPYAYTANLGQPDEADYDEIPRKALEYGAEKARLID 72


>gi|295695622|ref|YP_003588860.1| NAD+ synthetase [Bacillus tusciae DSM 2912]
 gi|295411224|gb|ADG05716.1| NAD+ synthetase [Bacillus tusciae DSM 2912]
          Length = 281

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 2/53 (3%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKI 60
            +L  SGG DS+     A   FDR  +  +   Y   +   L+    V +++
Sbjct: 38 KVVLGLSGGIDSAVVAYLAARAFDRGQILAVLMPYKTSSPASLDDARRVVEQL 90


>gi|298346268|ref|YP_003718955.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mobiluncus curtisii ATCC 43063]
 gi|298236329|gb|ADI67461.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mobiluncus curtisii ATCC 43063]
          Length = 409

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 40/141 (28%), Gaps = 7/141 (4%)

Query: 5   IKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSFDY--GQRNKVELECRLCVRKKI 60
           +++      L+  SGG DS+   +        V           R              +
Sbjct: 1   MRRKNLAKILVGLSGGVDSAVATARLQAAGHEVSGFFMQLESPSRPWSRPVTSAEPVDAL 60

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +   +  D LG +  +    L +  +  +  +     +D   PN  V     I   +  
Sbjct: 61  AD-AHRVADFLGVELQVW--DLAERFNRVVMDSFVQAYRDGLTPNPCVHCNRFIKFGYVI 117

Query: 121 TLAYRLGITNIVIGVCETDYS 141
             A R G   +  G     + 
Sbjct: 118 ERARREGFDYVATGHYARLWR 138


>gi|226356219|ref|YP_002785959.1| tRNA-specific 2-thiouridylase MnmA [Deinococcus deserti VCD115]
 gi|226318209|gb|ACO46205.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Deinococcus deserti VCD115]
          Length = 391

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/191 (10%), Positives = 46/191 (24%), Gaps = 18/191 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-----------ELECRLCVR 57
              L   SGG DSS   +   D+  +V      +   +K                   V 
Sbjct: 19  ERVLCAMSGGVDSSVTAALLKDQGYQVVGAMMRFWPDDKRVDTFDTCCSPDAAYEARRVA 78

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           +++                +    L + +                  NT V    ++   
Sbjct: 79  EQVGVPFYLLDYREQFQRHIVGPFLDEYARGRTPNP-------CVNCNTKVKFDELVKKA 131

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                 Y      +           +                   ++   +  P+  L+K
Sbjct: 132 KMLGCRYVATGHYVKRVENAAGEVEFWRGDDPRKDQTYFLWGTPRDALPYILFPVGELEK 191

Query: 178 YETWKLAQDIG 188
            +  ++A++ G
Sbjct: 192 PQVRQIAEERG 202


>gi|62184976|ref|YP_219761.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chlamydophila abortus S26/3]
 gi|73920121|sp|Q5L6D1|MNMA_CHLAB RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|62148043|emb|CAH63795.1| tRNA-methyltransferase [Chlamydophila abortus S26/3]
          Length = 362

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 48/187 (25%), Gaps = 9/187 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
              + ++  SGG DSS            RV  +     +       C     K   ++  
Sbjct: 1   MNKTVVVAMSGGVDSSVVAYLLKKYTSYRVLGIFMKNWEEEDSNGLCST--AKDYEDVER 58

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +      + +  +   +      ++ +    Q        +  R I F +    +   
Sbjct: 59  VAEQLDIPYYTV--SFAREYRERVFSRFLKEYSQGYTPNPDVLCNREIKFDLLQKKVVEL 116

Query: 126 LGITNIVIGVCETDYSGYPDC--RHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETW 181
            G        C  D         R       ++    G        V  PL  + K E  
Sbjct: 117 GGDFLATGHYCRLDVKSQRVGLLRGKDPHKDQSYFLCGTHPESLKNVLFPLGDMTKREVR 176

Query: 182 KLAQDIG 188
            +A   G
Sbjct: 177 SIAAQAG 183


>gi|329766102|ref|ZP_08257661.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329137373|gb|EGG41650.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 350

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 13/32 (40%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETL 38
          +    + L SGG DS   +    ++   V  +
Sbjct: 19 EKKKVVALLSGGLDSQLAVRMMQEQGFEVSAV 50


>gi|311897518|dbj|BAJ29926.1| hypothetical protein KSE_41390 [Kitasatospora setae KM-6054]
          Length = 563

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 26/82 (31%), Gaps = 2/82 (2%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DS+T    A      V       G+    +L+    V      +  +      E 
Sbjct: 216 LSGGLDSTTLAVLASKCGPVVGLTYHPKGREEGGDLDHARTVAHAFPRIRHRLMALGPEH 275

Query: 75  HILPLAILGDISHSSLTKNVAM 96
             LP   LG +  +      A+
Sbjct: 276 --LPFTDLGTLPLTDEPAPSAI 295


>gi|258593582|emb|CBE69923.1| GMP synthase [glutamine-hydrolyzing] (Glutamine amidotransferase)
           (GMP synthetase) [NC10 bacterium 'Dutch sediment']
          Length = 510

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 51/185 (27%), Gaps = 18/185 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS            ++  +  D G   K E                + +
Sbjct: 215 RVLCALSGGVDSSVVALLVHRAIGPKLTCVFVDNGLLRKGE--------------AAQVE 260

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            ++GE   + L  +             +  ++                         L  
Sbjct: 261 QAMGEHLGVHLVSVDARERFLTRLKGIIDPEEKRKIIGAEFIAVFEEESRRLGRFDFLAQ 320

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+     P      I++      L  +    +  PL  L K E  +L +++G
Sbjct: 321 GTLYPDVIESVSVKGPSVT---IKSHHNVGGLPEQFDFELLEPLRELFKDEVRELGRELG 377

Query: 189 GQDLV 193
             D +
Sbjct: 378 LPDAI 382


>gi|227832313|ref|YP_002834020.1| GMP synthase [Corynebacterium aurimucosum ATCC 700975]
 gi|262183830|ref|ZP_06043251.1| GMP synthase [Corynebacterium aurimucosum ATCC 700975]
 gi|227453329|gb|ACP32082.1| GMP synthase [Corynebacterium aurimucosum ATCC 700975]
          Length = 522

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 50/193 (25%), Gaps = 16/193 (8%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
            + I +   A+   SGG DS+   +       DR+  +  D+G     E E         
Sbjct: 216 REQIGEEGRAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGEREQVEK----- 270

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                    +  +              + +T+  A +                  L    
Sbjct: 271 ----DFVASTGAKLITADEREAFLNKLAGVTEPEAKRKAIGAEFIRSFERAVDQALDGQD 326

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
                     +   +               I++      L  +    +  PL  L K E 
Sbjct: 327 A------AFLVQGTLYPDVVESGGGDGTANIKSHHNVGGLPDDVEFELVEPLRLLFKDEV 380

Query: 181 WKLAQDIGGQDLV 193
             + +++G  + +
Sbjct: 381 RAVGRELGLPEEI 393


>gi|222087492|ref|YP_002546029.1| argininosuccinate synthase [Agrobacterium radiobacter K84]
 gi|221724940|gb|ACM28096.1| argininosuccinate synthase [Agrobacterium radiobacter K84]
          Length = 407

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 45/154 (29%), Gaps = 7/154 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K     +L +SGG D+S  L W        V T + D GQ  ++E        +K  EL+
Sbjct: 5   KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEP------ARKKAELL 58

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +  + +     +         +      + +   ++    +    I         A 
Sbjct: 59  GIKEIYIEDVREEFVRDFVFPMFRANAVYEGVYLLGTSIARPLISKHLIEIAKKTGADAI 118

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI 158
             G T         + S Y       I A     
Sbjct: 119 AHGATGKGNDQVRFELSAYALNPDIKIIAPWRDW 152


>gi|242810560|ref|XP_002485605.1| argininosuccinate synthase [Talaromyces stipitatus ATCC 10500]
 gi|218716230|gb|EED15652.1| argininosuccinate synthase [Talaromyces stipitatus ATCC 10500]
          Length = 416

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 25/66 (37%), Gaps = 5/66 (7%)

Query: 5  IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
          + K    + L +SGG D+S  L W +++   V     D GQ    +          I  +
Sbjct: 1  MAKPK--VCLAYSGGLDTSVILKWLIEQGYDVVAFMADVGQN--EDFAAAEKKALAIGAV 56

Query: 64 MPKWKD 69
              +D
Sbjct: 57 KFVVED 62


>gi|95929128|ref|ZP_01311873.1| thiamine biosynthesis protein [Desulfuromonas acetoxidans DSM
          684]
 gi|95135029|gb|EAT16683.1| thiamine biosynthesis protein [Desulfuromonas acetoxidans DSM
          684]
          Length = 324

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 13/31 (41%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
           AL +FSGG DS         +   V  L F
Sbjct: 3  KALGIFSGGLDSILAALLLRKQGVDVHCLCF 33


>gi|289596443|ref|YP_003483139.1| PP-loop domain protein [Aciduliprofundum boonei T469]
 gi|289534230|gb|ADD08577.1| PP-loop domain protein [Aciduliprofundum boonei T469]
          Length = 288

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/254 (12%), Positives = 68/254 (26%), Gaps = 24/254 (9%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-QRNKVELECRLCVRKK----- 59
           K      +  SGG+DS   L +  +R   +     + G   +  ++E  +    K     
Sbjct: 40  KPEGKIAIALSGGKDSMVLLHYFAERDYDIFGYFINLGIGEHSDKMEKLVRNACKEYGVE 99

Query: 60  --IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
             +  L  ++   +      P +  G +    + K               +      F  
Sbjct: 100 LIVTNLREEYGFGIENVRRKPCSACGTVKRYLMNKVPRENGASVVTTGHNMDDFLDFFFK 159

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                 Y+     +     E      P  R   +   +        ++V   +    L K
Sbjct: 160 NTLAKNYQWNRNMVPYLPSEHP-KMLPKIRPLYLLGDKEIGMYAKLNNVPYSSDKCPLAK 218

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYL-----GKRDKRYEWGYGCNS------CPACYL 226
           +  WK        +  N   +   + +       +  +       C        C  C L
Sbjct: 219 FSGWKEIFYEIEAEKKNFRYQMILSIWEMADFFPEERRELRECKKCGEPTSGEICAFCKL 278

Query: 227 RQKGWMEFKEKYQD 240
           R +    +   Y++
Sbjct: 279 RDR----YGNPYKN 288


>gi|188994499|ref|YP_001928751.1| GMP synthase [Porphyromonas gingivalis ATCC 33277]
 gi|226739658|sp|B2RIF9|GUAA_PORG3 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|188594179|dbj|BAG33154.1| glutamine-hydrolyzing GMP synthase [Porphyromonas gingivalis ATCC
           33277]
          Length = 506

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 51/187 (27%), Gaps = 21/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D+G   K E E    V +    L    
Sbjct: 213 DKVILALSGGVDSSVVAVLLNKAIGRNLTCIFVDHGLLRKGEFE---RVLQDYEHLGLNV 269

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                ++                    A+    +      + GR  I +           
Sbjct: 270 IGVNAKEKFF----------------AALSGVTDPEQKRKIIGRGFIEVFDEEAR-KLKD 312

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           I++      L    ++ +  PL  L K E  ++  ++
Sbjct: 313 IKWLGQGTIYPDVIESLSITGMVIKSHHNVGGLPERMNLRLVEPLRMLFKDEVRRVGLEL 372

Query: 188 GGQDLVN 194
           G    + 
Sbjct: 373 GMMPHLI 379


>gi|167835516|ref|ZP_02462399.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           thailandensis MSMB43]
          Length = 510

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 44/175 (25%), Gaps = 7/175 (4%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           ++FSGG DS+  L  A      V  +SF  G     ++E       +   +         
Sbjct: 233 VMFSGGIDSAIVLQLAHRHHPDVTAISF--GLPGSNDIEIAHRYCAEHG-IRHVIYTFTK 289

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           +D +  +             +       +            + L    +     G  ++ 
Sbjct: 290 QDLLENIDDAVYYGEFFEKIDAIDSTIAHFGYYIANKLGFKVALCGEGSD-EIFGGYDLF 348

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
               +          +     ++      M + V    P M     E       +
Sbjct: 349 KTHAQPGALSLYRLNNLHRTDLQRVDRASMRNTVEARVPFMD---AELIDYVLSL 400


>gi|73666707|ref|YP_302723.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Ehrlichia canis str. Jake]
 gi|91206807|sp|Q3YT30|GUAA_EHRCJ RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|72393848|gb|AAZ68125.1| GMP synthase (glutamine-hydrolyzing) [Ehrlichia canis str. Jake]
          Length = 526

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 56/186 (30%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS   +       D++  +  D G     E        +KI +L+   
Sbjct: 220 KKVIAAISGGVDSSVAAALTYRAIGDQLHCIFIDNGLLRYNE-------AEKISQLL--V 270

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                   I+  + +      S+T     +            G               L 
Sbjct: 271 NQFQMPITIVDKSSVFLNKLKSITDPEQKRKIIGKTFIEVFEG-----EANKIGGVEFLM 325

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I   V E+  +   +    TI++      L     + +  PL  L K E   L +++
Sbjct: 326 QGTIYPDVIESGGAVGKES--VTIKSHHNVGGLPDVMRLQLVEPLKLLFKDEVRLLGKEL 383

Query: 188 GGQDLV 193
           G  D +
Sbjct: 384 GISDEI 389


>gi|34540397|ref|NP_904876.1| GMP synthase [Porphyromonas gingivalis W83]
 gi|44887930|sp|Q7MWL9|GUAA_PORGI RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|34396710|gb|AAQ65775.1| GMP synthase [Porphyromonas gingivalis W83]
          Length = 506

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 51/187 (27%), Gaps = 21/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D+G   K E E    V +    L    
Sbjct: 213 DKVILALSGGVDSSVVAVLLNKAIGRNLTCIFVDHGLLRKGEFE---RVLQDYEHLGLNV 269

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                ++                    A+    +      + GR  I +           
Sbjct: 270 IGVNAKEKFF----------------AALSGVTDPEQKRKIIGRGFIEVFDEEAR-KLKD 312

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           I++      L    ++ +  PL  L K E  ++  ++
Sbjct: 313 IKWLGQGTIYPDVIESLSITGMVIKSHHNVGGLPERMNLRLVEPLRMLFKDEVRRVGLEL 372

Query: 188 GGQDLVN 194
           G    + 
Sbjct: 373 GMMPHLI 379


>gi|312602517|ref|YP_004022362.1| argininosuccinate synthase [Burkholderia rhizoxinica HKI 454]
 gi|312169831|emb|CBW76843.1| Argininosuccinate synthase (EC 6.3.4.5) [Burkholderia rhizoxinica
          HKI 454]
          Length = 452

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 29/72 (40%), Gaps = 3/72 (4%)

Query: 1  MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I+++ P      + FSGG D+S  L W   +       + + GQ ++ + +      
Sbjct: 1  MATILQQLPRGQKVGIAFSGGLDTSAALHWMRIKGAIPYAYTANLGQPDETDYDDIPRRA 60

Query: 58 KKIVELMPKWKD 69
          K+      +  D
Sbjct: 61 KQYGAENARLID 72


>gi|240849849|ref|YP_002971237.1| GMP synthase [Bartonella grahamii as4aup]
 gi|240266972|gb|ACS50560.1| GMP synthase [Bartonella grahamii as4aup]
          Length = 518

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 55/185 (29%), Gaps = 18/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS       +   D++  +  D+G   K E        ++++ L   
Sbjct: 221 KSRVICGLSGGVDSSVVAVLLHEAIGDQLTCILVDHGLMRKNE-------AEEVLTLFR- 272

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + + + L  +                +        +              A  L
Sbjct: 273 ------DHYNIELIHVNAADIFLNALEGETDPEKKRKTIGRLFIEVFEEETKKIGGAEFL 326

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+  +         I++      L  + ++ +  PL  L K E   L ++
Sbjct: 327 AQGTLYPDVIESVSAIGKTVT---IKSHHNVGGLPEQMNMQLVEPLRELFKDEVRLLGRE 383

Query: 187 IGGQD 191
           +G  +
Sbjct: 384 LGLPE 388


>gi|157363094|ref|YP_001469861.1| GMP synthase [Thermotoga lettingae TMO]
 gi|157313698|gb|ABV32797.1| GMP synthase, large subunit [Thermotoga lettingae TMO]
          Length = 504

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 60/189 (31%), Gaps = 23/189 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS           + +  +  D+G   K E E    + ++++ L    
Sbjct: 209 KKVVAALSGGVDSSVACVLVHRAIGENLLNVFVDHGLLRKNEEEEVPRIFRQVLGL---- 264

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                +   + L  L  I      + +  +                 F+      A R G
Sbjct: 265 NLLKIDARKVFLEKLRGIVDPEKKRKIIGEQ----------------FIRVFEKEAKRYG 308

Query: 128 ITNIVIGVCETDY--SGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            T+++ G   +D   S     +   I++      L     + +  PL  L K E   + +
Sbjct: 309 ATHLIQGTIYSDVIESAKSGKKTAAIKSHHNVGGLPQRMDLEIVEPLKNLFKDEVRIVGE 368

Query: 186 DIGGQDLVN 194
            +G    + 
Sbjct: 369 MLGIPRSII 377


>gi|145354938|ref|XP_001421731.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581969|gb|ABP00025.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 547

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 50/178 (28%), Gaps = 9/178 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+   +       DR+  +  D G     E   +  V +   + +     
Sbjct: 243 VICALSGGVDSAVAATLVHKAIGDRLHCVFVDNGLLRYKE---QERVMEMFRDNLH-LPV 298

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              +     L  L  ++     + +            F   +  I         + +  T
Sbjct: 299 DCVDHSEQMLTRLKGVTDPEKKRKIIGA----EFIECFKNFKGEIEKRTGVRPTFLVQGT 354

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                +      G       TI++      L  E    +  PL  L K E  KL   +
Sbjct: 355 LYPDVIESCPPPGSDQKHSHTIKSHHNVGGLPKELGFELVEPLRMLFKDEVRKLGAIM 412


>gi|114326927|ref|YP_744084.1| argininosuccinate synthase [Granulibacter bethesdensis CGDNIH1]
 gi|119361278|sp|Q0BVJ1|ASSY_GRABC RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|114315101|gb|ABI61161.1| argininosuccinate synthase [Granulibacter bethesdensis CGDNIH1]
          Length = 416

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 48/157 (30%), Gaps = 7/157 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +K     +L +SGG D+S  L W    +   V T + D GQ  ++E        ++  E+
Sbjct: 10  VKDVKKVVLAYSGGLDTSVILRWLQTTYNCEVVTFTADLGQGEELEP------ARRKAEM 63

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
               +  + +     +         +        +   ++    +  R I         A
Sbjct: 64  FGVKEIFVDDLRETFVKDFVFPMFRANAVYEGQYLLGTSIARPLIAQRQIEIAELTGADA 123

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         + S Y       + A     +L
Sbjct: 124 VAHGATGKGNDQVRFELSYYALKPDVKVIAPWREWDL 160


>gi|332967747|gb|EGK06854.1| argininosuccinate synthase [Kingella kingae ATCC 23330]
          Length = 444

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 23/57 (40%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +        K+    + +  D
Sbjct: 18 IAFSGGLDTSAALLWMKLKGANPYAYTANLGQPDEDDYNAIPEKAKQYGAEVARLID 74


>gi|227823766|ref|YP_002827739.1| argininosuccinate synthase [Sinorhizobium fredii NGR234]
 gi|227342768|gb|ACP26986.1| argininosuccinate synthase [Sinorhizobium fredii NGR234]
          Length = 525

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 48/161 (29%), Gaps = 10/161 (6%)

Query: 2   NDII---KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVR 57
            DI+   K     +L +SGG D+S  L W        V T + D GQ  ++E        
Sbjct: 118 TDIMASHKDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEP------A 171

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           +K  E++   +  + +     +         +      + +   ++    +    I    
Sbjct: 172 RKKAEMLGIKEIYIEDVREEFVRDFVFPMFRANAVYEGVYLLGTSIARPLISKHLIDIAR 231

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI 158
                A   G T         + S Y       I A     
Sbjct: 232 KTGADAIAHGATGKGNDQVRFELSAYALNPDIKIIAPWRDW 272


>gi|300778731|ref|ZP_07088589.1| GMP synthase (glutamine-hydrolyzing) [Chryseobacterium gleum ATCC
           35910]
 gi|300504241|gb|EFK35381.1| GMP synthase (glutamine-hydrolyzing) [Chryseobacterium gleum ATCC
           35910]
          Length = 509

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 53/186 (28%), Gaps = 18/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS           D++  +  D G    +  +    V  +  E     
Sbjct: 213 NKVILGLSGGVDSSVAAVLIHKAIGDQLTCIFVDTG---LLRKDEGKKVMDQYGEHF--- 266

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    + +    +   S L      + +   + N F+   +              G
Sbjct: 267 ------HMNIKMVDAKERFLSKLAGVDDPEAKRKIIGNEFIHVFDEESHKIEGAKFLAQG 320

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    +   S   +     I++      L  +    +  PL  L K E  K+ +++
Sbjct: 321 -----TIYPDVIESQSVNGPSAVIKSHHNVGGLPEDMEFELLEPLRELFKDEVRKVGEEL 375

Query: 188 GGQDLV 193
           G    +
Sbjct: 376 GIPHHL 381


>gi|190575182|ref|YP_001973027.1| argininosuccinate synthase [Stenotrophomonas maltophilia K279a]
 gi|190013104|emb|CAQ46736.1| putative argininosuccinate synthase [Stenotrophomonas maltophilia
          K279a]
          Length = 398

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 24/59 (40%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +L FSGG D+S C+ +  +R   V T+  D G  +  E +       ++      
Sbjct: 3  NKDVVLAFSGGLDTSFCVPYLQERGYNVHTVFADTGGVDDEERDFIEKRAAELGVTSHV 61


>gi|220916722|ref|YP_002492026.1| GMP synthase, large subunit [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219954576|gb|ACL64960.1| GMP synthase, large subunit [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 518

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 58/184 (31%), Gaps = 14/184 (7%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+           DR+  +  D G     E   R  V      +      
Sbjct: 220 VICALSGGVDSAVAALLVHRAIGDRLRCIFVDNGVLRAGE---RQQVEDVFGAMFHLPLV 276

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++          LG +   +   +   K +        V  + +  L      A  L   
Sbjct: 277 TVDASRR----FLGAL---AGVTDPERKRKIIGHEFIAVFEQEVERLAAHGARAKFLVQG 329

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   V E   S        TI++      L  + ++++  PL  L K E  +L  ++G 
Sbjct: 330 TLYPDVIE---SVSFRGPSATIKSHHNVGGLPEKMNLSLVEPLRELFKDEVRQLGLELGL 386

Query: 190 QDLV 193
            + +
Sbjct: 387 PEAI 390


>gi|197121929|ref|YP_002133880.1| GMP synthase [Anaeromyxobacter sp. K]
 gi|196171778|gb|ACG72751.1| GMP synthase, large subunit [Anaeromyxobacter sp. K]
          Length = 518

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 58/184 (31%), Gaps = 14/184 (7%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+           DR+  +  D G     E   R  V      +      
Sbjct: 220 VICALSGGVDSAVAALLVHRAIGDRLRCIFVDNGVLRAGE---RQQVEDVFGAMFHLPLV 276

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++          LG +   +   +   K +        V  + +  L      A  L   
Sbjct: 277 TVDASRR----FLGAL---AGVTDPERKRKIIGHEFIAVFEQEVERLAAHGARAKFLVQG 329

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   V E   S        TI++      L  + ++++  PL  L K E  +L  ++G 
Sbjct: 330 TLYPDVIE---SVSFRGPSATIKSHHNVGGLPEKMNLSLVEPLRELFKDEVRQLGLELGL 386

Query: 190 QDLV 193
            + +
Sbjct: 387 PEAI 390


>gi|195952861|ref|YP_002121151.1| argininosuccinate synthase [Hydrogenobaculum sp. Y04AAS1]
 gi|195932473|gb|ACG57173.1| Argininosuccinate synthase [Hydrogenobaculum sp. Y04AAS1]
          Length = 402

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 1/73 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK-VELECRLCVRKKIVELMP 65
           A   +L +SGG D+S  + W  +R   V T + D GQ+ +  E+  +      +  ++ 
Sbjct: 1  MAKRVILAYSGGLDTSIIVRWLTERGFEVMTYTADVGQKEELSEIPEKARKAGAVEAIVE 60

Query: 66 KWKDSLGEDHILP 78
            ++   +D  LP
Sbjct: 61 DIREEFVKDFCLP 73


>gi|149185056|ref|ZP_01863373.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Erythrobacter sp. SD-21]
 gi|148831167|gb|EDL49601.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Erythrobacter sp. SD-21]
          Length = 524

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 54/183 (29%), Gaps = 17/183 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+       +   D++  +  D+G     E        +++V L     
Sbjct: 228 KVICGLSGGVDSAVAAVLIHEAIGDQLTCVFVDHGLMRMNE-------AEQVVTLFR--- 277

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + + +PL  +                +                       A  L  
Sbjct: 278 ----DHYNIPLVHVNAEEMFLGGLEGQTDPEKKRKFIGGAFIDLFEAEAKKIGGADFLAQ 333

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+    +      TI++      L    ++ +  PL  L K E   L +++G
Sbjct: 334 GTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMNMELVEPLRELFKDEVRDLGRELG 391

Query: 189 GQD 191
             +
Sbjct: 392 LPE 394


>gi|325577993|ref|ZP_08148187.1| argininosuccinate synthase [Haemophilus parainfluenzae ATCC
          33392]
 gi|325160226|gb|EGC72354.1| argininosuccinate synthase [Haemophilus parainfluenzae ATCC
          33392]
          Length = 444

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 23/65 (35%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          + K     + FSGG D+S  L W   +       + + GQ ++ +         +     
Sbjct: 9  LPKGQKVGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYNAIPKKAMEYGAEN 68

Query: 65 PKWKD 69
           +  D
Sbjct: 69 ARLVD 73


>gi|323706021|ref|ZP_08117591.1| GMP synthase, large subunit [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323534635|gb|EGB24416.1| GMP synthase, large subunit [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 512

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 57/188 (30%), Gaps = 22/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS           D++  +  D G   K E        +K+V+    
Sbjct: 217 NDKVVCALSGGVDSSVAAVLVNRAIHDQLICIFVDNGLLRKNE-------AEKVVD---- 265

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                            +I           +++    P          F+      A ++
Sbjct: 266 ---------TFKNNFDMEIIKVDAKDRFLERLKGVKDPEEKRKIIGNEFIEVFKEEAKKI 316

Query: 127 G-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           G +  +V G    D          TI++      L  +    +  PL  L K E  ++ +
Sbjct: 317 GDVKYLVQGTLYPDVIESGSPVASTIKSHHNVGGLPQDVGFELIEPLRMLFKDEVRQVGR 376

Query: 186 DIGGQDLV 193
           ++G  D +
Sbjct: 377 ELGMPDEI 384


>gi|301156545|emb|CBW16016.1| argininosuccinate synthetase [Haemophilus parainfluenzae T3T1]
          Length = 444

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 23/65 (35%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          + K     + FSGG D+S  L W   +       + + GQ ++ +         +     
Sbjct: 9  LPKGQKVGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYNAIPKKAMEYGAEN 68

Query: 65 PKWKD 69
           +  D
Sbjct: 69 ARLVD 73


>gi|291557133|emb|CBL34250.1| GMP synthase (glutamine-hydrolyzing) [Eubacterium siraeum V10Sc8a]
          Length = 519

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 57/187 (30%), Gaps = 24/187 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +       +++  +  D+G   K E +      K       +  
Sbjct: 226 KVLLALSGGVDSSVACALLSKAVGNQLTCVFVDHGFMRKNEGDEVEQAFKDWDVNFIRVN 285

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG- 127
            +           +G +   S  +     I +               +      A ++G 
Sbjct: 286 AAD--------RFIGKLEGVSDPETKRKTIGEEF-------------IRVFEEEAKKIGK 324

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLAQD 186
           +  +V G    D           I++      L        +  PL  L K E  KL  +
Sbjct: 325 VDFLVQGTIYPDVIESGTGDAAVIKSHHNVGGLPDYVDFKEIIEPLRLLFKDEVRKLGTE 384

Query: 187 IGGQDLV 193
           +G  D++
Sbjct: 385 LGLSDVL 391


>gi|291530320|emb|CBK95905.1| GMP synthase (glutamine-hydrolyzing) [Eubacterium siraeum 70/3]
          Length = 519

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 57/187 (30%), Gaps = 24/187 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +       +++  +  D+G   K E +      K       +  
Sbjct: 226 KVLLALSGGVDSSVACALLSKAVGNQLTCVFVDHGFMRKNEGDEVEQAFKDWDVNFIRVN 285

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG- 127
            +           +G +   S  +     I +               +      A ++G 
Sbjct: 286 AAD--------RFIGKLEGVSDPETKRKTIGEEF-------------IRVFEEEAKKIGK 324

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLAQD 186
           +  +V G    D           I++      L        +  PL  L K E  KL  +
Sbjct: 325 VDFLVQGTIYPDVIESGTGDAAVIKSHHNVGGLPDYVDFKEIIEPLRLLFKDEVRKLGTE 384

Query: 187 IGGQDLV 193
           +G  D++
Sbjct: 385 LGLSDVL 391


>gi|260583885|ref|ZP_05851633.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Granulicatella elegans ATCC 700633]
 gi|260158511|gb|EEW93579.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Granulicatella elegans ATCC 700633]
          Length = 374

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 54/190 (28%), Gaps = 13/190 (6%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVE 62
           + K+    ++  SGG DSS            V  +   ++   ++  +       K +  
Sbjct: 1   MNKENIRVIVGMSGGVDSSVTALLLKQAGYDVIGIFMKNWDDTDENGVCTATEDYKDVAA 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +  +                       + +    + +    PN  V     +        
Sbjct: 61  VAEQIGIPYYS------VNFEKEYWDRVFEYFLKEYRLGRTPNPDVMCNKEVKFQAFLEY 114

Query: 123 AYRLGITNIVIGVCET----DYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLK 176
           A +LG   + +G        +       R       +T     L  +       P+  L+
Sbjct: 115 ALQLGADYVAMGHYARVEKDENGVVRLLRGVDNNKDQTYFLSQLNQQQLSKAMFPIGHLE 174

Query: 177 KYETWKLAQD 186
           K E  K+A++
Sbjct: 175 KKEVRKIAEE 184


>gi|259046678|ref|ZP_05737079.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Granulicatella adiacens ATCC 49175]
 gi|259036843|gb|EEW38098.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Granulicatella adiacens ATCC 49175]
          Length = 374

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/191 (12%), Positives = 52/191 (27%), Gaps = 14/191 (7%)

Query: 5   IKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVE 62
           +       ++  SGG DSS       +    V  +   ++   ++  +       K +  
Sbjct: 1   MSNEKIRVVVGMSGGVDSSVTALLLKEAGYDVIGIFMKNWDDTDENGVCTATEDYKDVAA 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +  +                       + +    + +    PN  V     +        
Sbjct: 61  VAEQIGIPYYS------VNFEKEYWDRVFEYFLREYRLGRTPNPDVMCNKEVKFQAFLDY 114

Query: 123 AYRLGITNIVIGVCET----DYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLK 176
           A +LG   + +G        +       R       +T     L  +       P+  L+
Sbjct: 115 ALQLGADYVAMGHYARVEKDENGIVHLLRGKDNNKDQTYFLSQLNQKQLEKAMFPIGHLE 174

Query: 177 KYETWKLAQDI 187
           K E  ++A+  
Sbjct: 175 KKEVREIAEKY 185


>gi|254420612|ref|ZP_05034336.1| argininosuccinate synthase [Brevundimonas sp. BAL3]
 gi|196186789|gb|EDX81765.1| argininosuccinate synthase [Brevundimonas sp. BAL3]
          Length = 412

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 41/154 (26%), Gaps = 5/154 (3%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K     +L +SGG D+S  L W    +   V T + D GQ  ++          K+    
Sbjct: 7   KPVKKVVLAYSGGLDTSIILKWLQTEYNAEVVTFTADLGQGEELGP--AREKALKLGIKP 64

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 + +     +         +  +     +   ++    +  R I         A 
Sbjct: 65  ENI--FIDDLREEFVRDFVFPMFRANAQYEGDYLLGTSIARPLISKRQIEIARQVGADAV 122

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI 158
             G T         +   Y       + A     
Sbjct: 123 CHGATGKGNDQVRFELGYYALEPDIRVIAPWREW 156


>gi|167751537|ref|ZP_02423664.1| hypothetical protein EUBSIR_02538 [Eubacterium siraeum DSM 15702]
 gi|167655345|gb|EDR99474.1| hypothetical protein EUBSIR_02538 [Eubacterium siraeum DSM 15702]
          Length = 519

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 57/187 (30%), Gaps = 24/187 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS   +       +++  +  D+G   K E +      K       +  
Sbjct: 226 KVLLALSGGVDSSVACALLSKAVGNQLTCVFVDHGFMRKNEGDEVEQAFKDWDVNFIRVN 285

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG- 127
            +           +G +   S  +     I +               +      A ++G 
Sbjct: 286 AAD--------RFIGKLEGVSDPETKRKTIGEEF-------------IRVFEEEAKKIGK 324

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLAQD 186
           +  +V G    D           I++      L        +  PL  L K E  KL  +
Sbjct: 325 VDFLVQGTIYPDVIESGTGDAAVIKSHHNVGGLPDYVDFKEIIEPLRLLFKDEVRKLGTE 384

Query: 187 IGGQDLV 193
           +G  D++
Sbjct: 385 LGLSDVL 391


>gi|153812650|ref|ZP_01965318.1| hypothetical protein RUMOBE_03057 [Ruminococcus obeum ATCC 29174]
 gi|149831354|gb|EDM86442.1| hypothetical protein RUMOBE_03057 [Ruminococcus obeum ATCC 29174]
          Length = 410

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 54/213 (25%), Gaps = 25/213 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
                +L +SGG D +T L   L       V     + GQ N+++         K+    
Sbjct: 1   MKEKVVLAYSGGLD-TTALIPWLKETFDYEVICCCVNCGQGNELDGLDERA---KLSGAS 56

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             + + + +D             + +   V       +                   +A 
Sbjct: 57  KLYIEDIVDD----------FCDNYVMPCVQAGAVYEHKYLLGTSMARPAIAKKLVEIAR 106

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           +     I  G                  A +  I                  + +     
Sbjct: 107 KENAVAICHGATGKGNDQIRFELGIKALAPDIKIIAPWRMTD----VWTMQSREDEIAFC 162

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
           Q  G    +NL  + SH+ Y   R+  +    G
Sbjct: 163 QAHG----INLPFDASHS-YSRDRNLWHISHEG 190


>gi|328552283|gb|AEB22775.1| GMP synthase [Bacillus amyloliquefaciens TA208]
          Length = 513

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 54/185 (29%), Gaps = 22/185 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E E                
Sbjct: 219 KQVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGEAE---------------- 262

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL- 126
               G           ++           K++  + P          F+      A +L 
Sbjct: 263 ----GVMKTFSEGFNMNVIKVDAKDRFLNKLKGVSDPEQKRKIIGNEFIYVFDDEAVKLK 318

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI  +V G   TD          TI++      L  +    +  PL  L K E   L  +
Sbjct: 319 GIDYLVQGTLYTDIIESGTATAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRALGTE 378

Query: 187 IGGQD 191
           +G  D
Sbjct: 379 LGIPD 383


>gi|327399684|ref|YP_004340553.1| Thiamine biosynthesis protein [Hippea maritima DSM 10411]
 gi|327182313|gb|AEA34494.1| Thiamine biosynthesis protein [Hippea maritima DSM 10411]
          Length = 330

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 12/37 (32%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
          +       + L+SGG DS   +         V  L  
Sbjct: 1  MKNLNKKCVALYSGGLDSLLAILIVKSLGVEVYPLFV 37


>gi|307266583|ref|ZP_07548114.1| tRNA methyl transferase-like protein [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|326391761|ref|ZP_08213282.1| tRNA methyl transferase-like protein [Thermoanaerobacter
           ethanolicus JW 200]
 gi|306918380|gb|EFN48623.1| tRNA methyl transferase-like protein [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|325992199|gb|EGD50670.1| tRNA methyl transferase-like protein [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 297

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 16/61 (26%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
             ++      ++  SGG+DS             V     D G            V +   
Sbjct: 41  YKMLPPKGRVVVAISGGKDSLVTTFVLKRLGYEVLGFFIDLGIEENNFSSRSREVVENFC 100

Query: 62  E 62
           +
Sbjct: 101 K 101


>gi|321312277|ref|YP_004204564.1| tRNA-specific 2-thiouridylase MnmA [Bacillus subtilis BSn5]
 gi|291485158|dbj|BAI86233.1| tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Bacillus subtilis subsp. natto BEST195]
 gi|320018551|gb|ADV93537.1| tRNA-specific 2-thiouridylase MnmA [Bacillus subtilis BSn5]
          Length = 371

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/156 (11%), Positives = 37/156 (23%), Gaps = 7/156 (4%)

Query: 4   IIKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           + K+      ++  SGG DSS       ++   V  +             C     +   
Sbjct: 1   MEKRPEDTRVVVGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGFC--TATEDYE 58

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +++          + +         +  + +    + +    PN  V     I       
Sbjct: 59  DVIRVCNQIGIPYYAVN---FEKQYYEKVFQYFLDEYKAGRTPNPDVLCNKEIKFKAFLE 115

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA 157
            A  LG   +  G            R          
Sbjct: 116 HALSLGADYLATGHYARVDRSGEKVRMLRGIDENKD 151


>gi|253575902|ref|ZP_04853236.1| argininosuccinate synthase [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251844696|gb|EES72710.1| argininosuccinate synthase [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 412

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/151 (14%), Positives = 46/151 (30%), Gaps = 9/151 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKI-VELMP 65
               +L +SGG D+S  L W  + +D  +   + D GQ+ +++      +        + 
Sbjct: 3   KEKIVLAYSGGLDTSVILKWLKETYDAEIIAFTADIGQKEELDGLEAKALATGASKVYID 62

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +D   +D I P+   G +         ++           +  R +         A  
Sbjct: 63  DLRDEFAKDFIYPMFQAGALYEGQYLLGTSIARP-------LIAKRMVEIARAEGATAIA 115

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIET 156
            G T         + +         + A   
Sbjct: 116 HGATGKGNDQVRFELAAAALAPEIRVIAPWR 146


>gi|161833723|ref|YP_001597919.1| putative argininosuccinate synthase (argG)/acetyltransferase
           activity of N-acetylglutamate synthase (argA)
           [Candidatus Sulcia muelleri GWSS]
 gi|152206213|gb|ABS30523.1| putative argininosuccinate synthase (argG)/acetyltransferase
           activity of N-acetylglutamate synthase (argA)
           [Candidatus Sulcia muelleri GWSS]
          Length = 580

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 30/65 (46%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           +N+ + K    LL +SGG D+S CL +  +   +V T+  + G  N  +LE        I
Sbjct: 180 LNNYLNKGDKILLAYSGGLDTSYCLKYLTNEGYKVITIIINTGVFNNKDLESIEKRALNI 239

Query: 61  VELMP 65
             +  
Sbjct: 240 GAISH 244


>gi|126175185|ref|YP_001051334.1| GMP synthase [Shewanella baltica OS155]
 gi|153001511|ref|YP_001367192.1| GMP synthase [Shewanella baltica OS185]
 gi|160876247|ref|YP_001555563.1| GMP synthase [Shewanella baltica OS195]
 gi|304410028|ref|ZP_07391647.1| GMP synthase, large subunit [Shewanella baltica OS183]
 gi|307302259|ref|ZP_07582017.1| GMP synthase, large subunit [Shewanella baltica BA175]
 gi|226739726|sp|A3D6V2|GUAA_SHEB5 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226739727|sp|A6WQP0|GUAA_SHEB8 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226739728|sp|A9KWW6|GUAA_SHEB9 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|125998390|gb|ABN62465.1| GMP synthase (glutamine-hydrolyzing) [Shewanella baltica OS155]
 gi|151366129|gb|ABS09129.1| GMP synthase, large subunit [Shewanella baltica OS185]
 gi|160861769|gb|ABX50303.1| GMP synthase, large subunit [Shewanella baltica OS195]
 gi|304351437|gb|EFM15836.1| GMP synthase, large subunit [Shewanella baltica OS183]
 gi|306914297|gb|EFN44718.1| GMP synthase, large subunit [Shewanella baltica BA175]
 gi|315268436|gb|ADT95289.1| GMP synthase, large subunit [Shewanella baltica OS678]
          Length = 525

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 49/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS            ++  +  D G     E                +  +
Sbjct: 230 VILGLSGGVDSSVVAMLLHRAIGKKLTCVFVDNGLLRLNE--------------AEQVME 275

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+   L +  +   +            +        V              A  L   
Sbjct: 276 MFGDHFGLNIIHVDAENRFLDAMKGEADPEAKRKIIGRVFVEIFDEESKKCANAKWLAQG 335

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S         I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 336 TIYPDVIESAGSATGKAHV--IKSHHNVGGLPDDMELGLVEPLRELFKDEVRKIGLELGL 393

Query: 190 Q 190
            
Sbjct: 394 P 394


>gi|327398195|ref|YP_004339064.1| GMP synthase [Hippea maritima DSM 10411]
 gi|327180824|gb|AEA33005.1| GMP synthase (glutamine-hydrolyzing) [Hippea maritima DSM 10411]
          Length = 506

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 55/186 (29%), Gaps = 19/186 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K    +   SGG DSS           DR   +  + G   K E E  L + KK+   + 
Sbjct: 209 KDKRVIGAVSGGVDSSVVAVLMNKAIGDRFVGVFVNTGLLRKNEPEYVLNLFKKLNVNIR 268

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
               S      L L  L  I      + +                     +      A  
Sbjct: 269 YEDAS-----ELFLERLKGIEDPEKKRKIIGH----------TFIDVFAKIAKEYNNAEF 313

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           L    +   + E+     P      I++      L  + +  +  PL  L K E  +L +
Sbjct: 314 LAQGTLYPDIIESVSVKGPSAT---IKSHHNVGGLPKDLNFKLIEPLRELFKDEVRQLGR 370

Query: 186 DIGGQD 191
            +G  +
Sbjct: 371 QLGIDE 376


>gi|322515062|ref|ZP_08068070.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Actinobacillus ureae ATCC 25976]
 gi|322118942|gb|EFX91119.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Actinobacillus ureae ATCC 25976]
          Length = 389

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 51/188 (27%), Gaps = 9/188 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                 ++  SGG DSS        +  +VE L        + + +   C     +    
Sbjct: 27  NAKKKVIIGMSGGVDSSVSAFILQQQGYQVEGLFMKNW---EEDDDTDYCTAAADLADAQ 83

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D LG   +  +    +   +     +             +  + I F  F    A  
Sbjct: 84  AVADKLG-MKLHKINFAAEYWDNVFEHFLNEYKAGRTPNPDILCNKEIKFKAFLEYAAKD 142

Query: 126 LGITNIVIGVCETDYSGYPDCRHDT-----IRAIETAINLGMESHVTVHTPLMWLKKYET 180
           LG   I  G          + +                 L  +       P+  + K   
Sbjct: 143 LGADYIATGHYVRRSGDDNNAQLLCGLDANKDQSYFLYTLSHKQVGQSLFPVGDIGKPIV 202

Query: 181 WKLAQDIG 188
            ++A+D+G
Sbjct: 203 RQIAEDLG 210


>gi|229074125|ref|ZP_04207172.1| tRNA(Ile)-lysidine synthase [Bacillus cereus Rock4-18]
 gi|228709019|gb|EEL61145.1| tRNA(Ile)-lysidine synthase [Bacillus cereus Rock4-18]
          Length = 480

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/197 (12%), Positives = 53/197 (26%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D++K+  + ++  SGG DS   L + L++                          K +V 
Sbjct: 21  DVLKERSTIVVGVSGGPDSLALLYYLLEK--------------------RAEKQLKIVVA 60

Query: 63  LMPKW--KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +      D   ED      +   +     T  V +                     F  
Sbjct: 61  HVDHMFRGDESHEDLQFVQDLCKGLGVICETIRVNVSQYQQQYGMNAQVAARECRYAFLE 120

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKK 177
            +  +     + +G    D       R       +    + ++       +  PL+ + K
Sbjct: 121 RIMKKYDARYVALGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGYLIRPLLGVTK 180

Query: 178 YETWKLAQDIGGQDLVN 194
            E      ++     ++
Sbjct: 181 EEIVNYCNELNLIPRID 197


>gi|110669078|ref|YP_658889.1| GMP synthase subunit B [Haloquadratum walsbyi DSM 16790]
 gi|109626825|emb|CAJ53293.1| GMP synthase, subunit B (glutamine-hydrolyzing) [Haloquadratum
           walsbyi DSM 16790]
 gi|148508177|gb|ABQ75968.1| GMP synthase, subunit B (glutamine-hydrolyzing) [uncultured
           haloarchaeon]
          Length = 305

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 55/188 (29%), Gaps = 28/188 (14%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             +A++  SGG DSS   + A     D++  +  D G                   LM K
Sbjct: 21  EDNAVIALSGGVDSSVSAALAYKAIGDQLTPVYVDTG-------------------LMRK 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +    +D    +  L  +            + D       +      F+      A+  
Sbjct: 62  GETKQVKDTFAYMDSLRVVDAQDRFFESLAGVTDPEEKRHVI---GEQFIREFEEEAHAA 118

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-VHTPLMWLKKYETWKLAQ 185
               +V                  I++      L        +  P+  L K E  ++A+
Sbjct: 119 NADYLVQ----GTIYPDRIESEGNIKSHHNVGGLPDVVDFEGIVEPVRELYKDEVREVAR 174

Query: 186 DIGGQDLV 193
           ++   +LV
Sbjct: 175 ELDLDELV 182


>gi|315636122|ref|ZP_07891376.1| LPS biosynthesis protein WbpG [Arcobacter butzleri JV22]
 gi|315479483|gb|EFU70162.1| LPS biosynthesis protein WbpG [Arcobacter butzleri JV22]
          Length = 373

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/190 (11%), Positives = 47/190 (24%), Gaps = 10/190 (5%)

Query: 7   KAPS--ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K      +L  SGG DS+      ++   R   +  D G  +++ ++    V   +   +
Sbjct: 65  KNKKYDCILGLSGGVDSTYLAHLVVELGLRPLVVHIDTGWNSEIAVQNIENVVNILNLDL 124

Query: 65  PKWKDSLGEDHILPLAILGDISHS-----SLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                   E   L LA                    +           +   + +   + 
Sbjct: 125 HTHVIDWEEMKDLQLAFFKASIPDCDIPQDHVFPALLNKIAKQNKIKHIISGHNVVTEYI 184

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV---TVHTPLMWLK 176
               +     ++   +      G    +     ++   I                 +   
Sbjct: 185 LPRNWSYDSNDLTHLLDVHKKFGKIPLKKYPRYSLFDRIFTYRWIFPVKSHRFLYYVPYD 244

Query: 177 KYETWKLAQD 186
           K E  K  Q+
Sbjct: 245 KEEIKKFIQE 254


>gi|168334597|ref|ZP_02692750.1| hypothetical protein Epulo_06348 [Epulopiscium sp. 'N.t.
          morphotype B']
          Length = 267

 Score = 45.7 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 4/59 (6%)

Query: 13 LLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
          + FSGG DSS  L  A +   +    V  ++F+     K +LE    V +++  +    
Sbjct: 18 IAFSGGVDSSLLLKVAAEEGKKLGVLVHAVTFETSLHPKADLEIAAKVAEEVGAIHKVI 76


>gi|332971469|gb|EGK10422.1| argininosuccinate synthase [Psychrobacter sp. 1501(2011)]
          Length = 410

 Score = 45.3 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 49/178 (27%), Gaps = 9/178 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKK 59
           M+    K    +L +SGG D+S    W  D +D  V T + D GQ  +VE          
Sbjct: 1   MSIEKDKINKIVLAYSGGLDTSIIAKWLQDTYDAEVITFTADIGQGEEVEPARAKAEAMG 60

Query: 60  IVELM-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
           I  +     +     D++ P+     I         ++           +  R +     
Sbjct: 61  IKHIHIEDLRAEFARDYVFPMFRANAIYEGEYLLGTSIARP-------LIAKRLVEIAKE 113

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
               A   G T         +             A     +L     +  +     + 
Sbjct: 114 HNADAISHGATGKGNDQVRFELGATALAPDVKTIAPWREWDLSSRESLMKYAEEHNIP 171


>gi|330825963|ref|YP_004389266.1| argininosuccinate synthase [Alicycliphilus denitrificans K601]
 gi|329311335|gb|AEB85750.1| Argininosuccinate synthase [Alicycliphilus denitrificans K601]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 23/57 (40%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W  ++       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALRWMKNKGAIPYAYTANLGQPDEDDYDAIPRKAMEYGAEAARLVD 72


>gi|315022618|gb|EFT35644.1| GMP synthase [Riemerella anatipestifer RA-YM]
 gi|325336907|gb|ADZ13181.1| GMP synthase, PP-ATPase domain/subunit [Riemerella anatipestifer
           RA-GD]
          Length = 509

 Score = 45.3 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 49/187 (26%), Gaps = 18/187 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS            ++  +  D G   K E                K
Sbjct: 212 NQKVILGLSGGVDSSVAAVLIHKAIGSQLTCIFVDTGLLRKNE--------------AQK 257

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             ++ G    L + ++                +                       A  L
Sbjct: 258 VMENYGSHFNLNIKLIDASERFLSKLKGVSDPEQKRKIIGSEFVAVFDEESHKIEGAKFL 317

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+     P      I++      L  +    +  PL  L K E  K+ ++
Sbjct: 318 AQGTIYPDVIESQSVKGP---SAVIKSHHNVGGLPEDMEFELLEPLRELFKDEVRKVGEE 374

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 375 LGIPHHL 381


>gi|319762216|ref|YP_004126153.1| argininosuccinate synthase [Alicycliphilus denitrificans BC]
 gi|317116777|gb|ADU99265.1| argininosuccinate synthase [Alicycliphilus denitrificans BC]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 23/57 (40%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W  ++       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALRWMKNKGAIPYAYTANLGQPDEDDYDAIPRKAMEYGAEAARLVD 72


>gi|260467302|ref|ZP_05813476.1| argininosuccinate synthase [Mesorhizobium opportunistum WSM2075]
 gi|259028906|gb|EEW30208.1| argininosuccinate synthase [Mesorhizobium opportunistum WSM2075]
          Length = 407

 Score = 45.3 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 46/158 (29%), Gaps = 10/158 (6%)

Query: 5   IKKAP---SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
           + K       +L +SGG D+S  L W        V T + D GQ  ++E        +K 
Sbjct: 1   MSKTKDVNKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGGELEP------ARKK 54

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            E+M      + +     ++        + T      +   ++    +    +       
Sbjct: 55  AEMMGIKDIRVVDVREEFVSDFVFPMFRANTVYEGTYLLGTSIARPLISKHLVEIARETG 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI 158
             A   G T         + S Y       + A     
Sbjct: 115 ADAIAHGATGKGNDQVRFELSAYALNPDIKVIAPWRDW 152


>gi|229100858|ref|ZP_04231666.1| tRNA(Ile)-lysidine synthase [Bacillus cereus Rock3-28]
 gi|228682558|gb|EEL36627.1| tRNA(Ile)-lysidine synthase [Bacillus cereus Rock3-28]
          Length = 283

 Score = 45.3 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/197 (12%), Positives = 54/197 (27%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D++K+  + ++  SGG DS   L + L++                          + +V 
Sbjct: 21  DVLKERSTIVVGVSGGPDSLALLYYLLEK--------------------RAEKQLEIVVA 60

Query: 63  LMPKW--KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +      D   ED      +   +     T  V +                     F  
Sbjct: 61  HVDHMFRGDESHEDLQFVQDLCKGLGVICETIRVNVSQYQQQYGMNAQVAARECRYAFLE 120

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKK 177
            +  +     + +G    D       R       +    + ++       +  PL+ + K
Sbjct: 121 RIMKKYDARYVALGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGYLIRPLLGVTK 180

Query: 178 YETWKLAQDIGGQDLVN 194
            E  K   ++     ++
Sbjct: 181 EEIVKYCNELNLIPRID 197


>gi|205814900|sp|Q6MLR7|MNMA_BDEBA RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 360

 Score = 45.3 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/194 (10%), Positives = 50/194 (25%), Gaps = 20/194 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DY----------GQRNKVELECRL 54
               L+  SGG DSS   +  +++   V   +    DY             + ++++   
Sbjct: 3   KGRVLVAMSGGVDSSAAAALLVEQGYEVIGATMQVWDYSTCDIEEGNGTCCSSIDVDDAR 62

Query: 55  CVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            V  ++                +    L             +   + N    F      +
Sbjct: 63  AVADRLGIPFYVINCEAKFRAAVIDPFLKAYLEG----QTPLPCVNCNTYLKFDHLVKKM 118

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
             +    +A       +         +       D          +  E    +  P+  
Sbjct: 119 RELECDYIATGHYAKIVYDD---KGKASIHTSTDDWKDQTYFLFTIDPELVPKLLFPVGD 175

Query: 175 LKKYETWKLAQDIG 188
           +KK +  + ++  G
Sbjct: 176 MKKPQVREYSESRG 189


>gi|194365696|ref|YP_002028306.1| tRNA-specific 2-thiouridylase MnmA [Stenotrophomonas maltophilia
           R551-3]
 gi|229487423|sp|B4SIN4|MNMA_STRM5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|194348500|gb|ACF51623.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Stenotrophomonas maltophilia R551-3]
          Length = 380

 Score = 45.3 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 48/185 (25%), Gaps = 11/185 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            P  ++  SGG DSS      + + + V  L       +          R+  V +    
Sbjct: 3   TPRVMVGVSGGVDSSVAAWRLVQQGEAVAGLFMQNWADDGSGECRAEDDRRDAVAVCGLL 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                  H    +   +         +A            +  R  +        A  LG
Sbjct: 63  G---IPFHFRDFS--NEYWQGVFEHFLAEYAAGRTPNPDVLCNRE-VKFKHFLDAARELG 116

Query: 128 ITNIVIGVCETDYSGYPD-----CRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G                    +         LG +       P+  L+K +  +
Sbjct: 117 AERIATGHYARVAQRGHQWLLLRGADRSKDQSYFLHQLGQQQLAATLFPIGDLEKTDLRR 176

Query: 183 LAQDI 187
           +A+D+
Sbjct: 177 IARDV 181


>gi|325912457|ref|ZP_08174852.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Lactobacillus iners UPII 143-D]
 gi|325475799|gb|EGC78970.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Lactobacillus iners UPII 143-D]
          Length = 517

 Score = 45.3 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 55/187 (29%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +       D++  +  D+G   K E      V   + + +  
Sbjct: 222 NKKVILGLSGGVDSSVTATLLHRAIGDQLTAIFVDHGMLRKNE---AEQVMAALNKELGI 278

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +         + G        K +  +  +                VF        
Sbjct: 279 NIIKVDAADRFLSKLAGVTKPERKRKIIGKEFIE----------------VFNEEAQKLK 322

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  +  G   TD          TI++      L  + H ++  PL  L K E   L + 
Sbjct: 323 DIDFLAQGTLYTDVIESGTNTAKTIKSHHNVGGLPKDMHFSLIEPLRKLFKDEVRVLGEK 382

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 383 LGLPHDL 389


>gi|315497058|ref|YP_004085862.1| argininosuccinate synthase [Asticcacaulis excentricus CB 48]
 gi|315415070|gb|ADU11711.1| argininosuccinate synthase [Asticcacaulis excentricus CB 48]
          Length = 411

 Score = 45.3 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 43/157 (27%), Gaps = 5/157 (3%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K     +L +SGG D+S  L W    +   V T + D GQ  ++E        + +    
Sbjct: 7   KPVKKVVLAYSGGLDTSIILKWLQTEYNAEVVTFTADLGQGEELEP--ARKKAELLGIKP 64

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 + +     +         + T      +   ++    +  + I         A 
Sbjct: 65  ENI--YIEDLREEFVRDFVFPMFRANTVYEGQYLLGTSIARPLIAKKQIEIARKVGADAV 122

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
             G T         +   Y       + A     +  
Sbjct: 123 CHGATGKGNDQVRFELGYYGLEPDIRVIAPWREWDFA 159


>gi|315272542|gb|ADU02856.1| asparagine synthetase [Pinus pinaster]
          Length = 593

 Score = 45.3 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 54/185 (29%), Gaps = 14/185 (7%)

Query: 13  LLFSGGQDSSTCLSWALDR----------FDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +L SGG DSS   + A              D++   SF  G +   +L+    V + +  
Sbjct: 231 VLLSGGLDSSLVAAVASRYLAATKAGKQWGDKLH--SFCVGLKGSPDLKAAKEVAEYLGT 288

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
              ++     +D I  +  +     +     +        +          + L    + 
Sbjct: 289 FHHEF-HFTVQDGIDAIEDVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVLSGEGSD 347

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
               G         + ++      +   +   +        S   V   + +L K E   
Sbjct: 348 EIFGGYLYFHKAPNKEEFHQETCRKIKALHMYDCLRANKSTSAWGVEARVPFLDK-EFVN 406

Query: 183 LAQDI 187
           +A DI
Sbjct: 407 VAMDI 411


>gi|289671195|ref|ZP_06492270.1| GMP synthase [Xanthomonas campestris pv. musacearum NCPPB4381]
          Length = 521

 Score = 45.3 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 49/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D G     E +              +   
Sbjct: 226 VILGLSGGVDSSVVAALLHKAIGDKLTCVFVDTGLLRWQEGD--------------QVMA 271

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E   + +  +                +        +              A  L   
Sbjct: 272 MFAEHMGVKVIRVNASDRYFAKLEGVSDPEAKRKIIGNLFVDIFDEESNKLANAKWLAQG 331

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S     +   I++      L     + +  PL  L K E  +L  ++G 
Sbjct: 332 TIYPDVIESAGS--KTGKAHVIKSHHNVGGLPEHMKLGLVEPLRELFKDEVRRLGVELGL 389

Query: 190 Q 190
            
Sbjct: 390 P 390


>gi|289670488|ref|ZP_06491563.1| tRNA-specific 2-thiouridylase MnmA [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 130

 Score = 45.3 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 33/134 (24%), Gaps = 6/134 (4%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            P  ++  SGG DSS        + +++  L       +          R+  V +    
Sbjct: 2   TPRIVVGVSGGVDSSVAAWKLAQQGEQIAGLFMQNWADDGSGDCRAEDDRRDAVAVCGVL 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                               S + ++   +      PN  V     +        A  LG
Sbjct: 62  GIP------FHFRDFSGEYWSGVFEHFLAEYAAGRTPNPDVLCNREVKFKHFLDAAQALG 115

Query: 128 ITNIVIGVCETDYS 141
              I  G       
Sbjct: 116 AERIATGHYAQVAH 129


>gi|289665798|ref|ZP_06487379.1| GMP synthase [Xanthomonas campestris pv. vasculorum NCPPB702]
          Length = 521

 Score = 45.3 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 49/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D G     E +              +   
Sbjct: 226 VILGLSGGVDSSVVAALLHKAIGDKLTCVFVDTGLLRWQEGD--------------QVMA 271

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E   + +  +                +        +              A  L   
Sbjct: 272 MFAEHMGVKVIRVNASDRYFAKLEGVSDPEAKRKIIGNLFVDIFDEESNKLANAKWLAQG 331

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S     +   I++      L     + +  PL  L K E  +L  ++G 
Sbjct: 332 TIYPDVIESAGS--KTGKAHVIKSHHNVGGLPEHMKLGLVEPLRELFKDEVRRLGVELGL 389

Query: 190 Q 190
            
Sbjct: 390 P 390


>gi|260551475|ref|ZP_05825659.1| ATPase [Acinetobacter sp. RUH2624]
 gi|260405469|gb|EEW98962.1| ATPase [Acinetobacter sp. RUH2624]
          Length = 228

 Score = 45.3 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 43/120 (35%), Gaps = 7/120 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSF--DYGQR---NKVELECRLCVRKKIV- 61
              +++ FSGG+DSS  L  A+   + +  +    ++GQR   + + L+      K I  
Sbjct: 11  NRQSIVSFSGGKDSSLALYDAMRTGNVIGLIVMLEEHGQRSRSHAMPLDIIQAQAKAIGL 70

Query: 62  -ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
              M     +  E   + L        + +     + + ++   +  V     + L    
Sbjct: 71  PVFMASSSWNDYESKFINLLNEAKQKGAEVLVTGDLDMPEHGCWHDRVTQMVGLKLGMPL 130


>gi|260577537|ref|ZP_05845477.1| probable tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Corynebacterium jeikeium ATCC 43734]
 gi|258604341|gb|EEW17578.1| probable tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Corynebacterium jeikeium ATCC 43734]
          Length = 389

 Score = 45.3 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 56/204 (27%), Gaps = 6/204 (2%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK-KIVELMPKWKDSLGE 73
            SGG DS+   S AL+    V  +     Q  +            +      +  D LG 
Sbjct: 1   MSGGVDSAVAASRALEAGHEVIGVHLALSQSPEAVRAGSRGCCSLEDSADARRVADKLGI 60

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
              +      D   + +  +          PN  +     I        +  LG   +V 
Sbjct: 61  PFYVW--DFSDRFKADVIDDFVDSYAIGETPNPCLRCNEKIKFEALLDRSIALGFDAVVT 118

Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK-KYETWKLAQDIGGQDL 192
           G     + G      D  +     + +  +  +      +    K E  + A+D G    
Sbjct: 119 GHYARLHDGVMRRGVDANKDQSYVLGVLTDEQLAHCMFPVGDTIKPEIREEAKDHGFGVA 178

Query: 193 VNLILEESHTCYLGKRDKRYEWGY 216
                 +   C++     +   G 
Sbjct: 179 SKPDSHDI--CFIPDGQTQAFLGK 200


>gi|227894459|ref|ZP_04012264.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Lactobacillus ultunensis DSM 16047]
 gi|227863618|gb|EEJ71039.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Lactobacillus ultunensis DSM 16047]
          Length = 516

 Score = 45.3 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 60/204 (29%), Gaps = 30/204 (14%)

Query: 1   MNDIIKKA----------PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVE 49
           M D I                +L  SGG DSS   +       D++  +  D+G   K E
Sbjct: 204 MEDFIDMKVDEIRKEVGDKKVILGLSGGVDSSVTATLLHKAIGDQLTAIFVDHGMLRKDE 263

Query: 50  LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
            +  +    K  +L          D    L+ L  ++     + +  K            
Sbjct: 264 GDQVMKALNK--DLGVNIIRVNAADRF--LSKLKGVTDPEKKRKIIGKEFIEVFNEEAKK 319

Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
            +++ FL         +                       TI++      L  + H  + 
Sbjct: 320 LKDVDFLAQGTLYTDVIE---------------SGTNTAQTIKSHHNVGGLPKDMHFKLI 364

Query: 170 TPLMWLKKYETWKLAQDIGGQDLV 193
            PL  L K E  +L + +G    +
Sbjct: 365 EPLRKLFKDEVRELGEKLGIPHDL 388


>gi|21231685|ref|NP_637602.1| argininosuccinate synthase [Xanthomonas campestris pv. campestris
          str. ATCC 33913]
 gi|66768192|ref|YP_242954.1| argininosuccinate synthase [Xanthomonas campestris pv. campestris
          str. 8004]
 gi|188991327|ref|YP_001903337.1| argininosuccinate synthase [Xanthomonas campestris pv. campestris
          str. B100]
 gi|24211487|sp|Q8P8J4|ASSY_XANCP RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|21113384|gb|AAM41526.1| argininosuccinate synthase [Xanthomonas campestris pv. campestris
          str. ATCC 33913]
 gi|66573524|gb|AAY48934.1| argininosuccinate synthase [Xanthomonas campestris pv. campestris
          str. 8004]
 gi|167733087|emb|CAP51285.1| Argininosuccinate synthase, probable [Xanthomonas campestris pv.
          campestris]
          Length = 397

 Score = 45.3 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 25/59 (42%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
          +   +L FSGG D+S C+ +  +R   V T+  D G  +  E +       ++      
Sbjct: 3  SKDIVLAFSGGLDTSFCIPYLQERGYAVHTVFADTGGVDAEERDFIEKRAAELGAASHV 61


>gi|222150070|ref|YP_002551027.1| argininosuccinate synthase [Agrobacterium vitis S4]
 gi|221737052|gb|ACM38015.1| argininosuccinate synthase [Agrobacterium vitis S4]
          Length = 409

 Score = 45.3 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 31/80 (38%), Gaps = 6/80 (7%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV- 61
          + K     +L +SGG D+S  L W        V T + D GQ  ++E        + +  
Sbjct: 3  LPKDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEP--ARKKAEMLGI 60

Query: 62 --ELMPKWKDSLGEDHILPL 79
              +   ++    D + P+
Sbjct: 61 KEIFIEDVREEFVRDFVFPM 80


>gi|188576626|ref|YP_001913555.1| GMP synthase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|226739767|sp|B2SLG1|GUAA_XANOP RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|188521078|gb|ACD59023.1| GMP synthase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 521

 Score = 45.3 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 49/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D G     E +              +   
Sbjct: 226 VILGLSGGVDSSVVAALLHKAIGDKLTCVFVDTGLLRWQEGD--------------QVMA 271

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E   + +  +                +        +              A  L   
Sbjct: 272 MFAEHMGVKVIRVNAADRYFAKLEGVSDPEAKRKIIGNLFVEIFDEESNTLANAKWLAQG 331

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S     +   I++      L     + +  PL  L K E  +L  ++G 
Sbjct: 332 TIYPDVIESAGS--KTGKAHVIKSHHNVGGLPQHMKLGLVEPLRELFKDEVRRLGVELGL 389

Query: 190 Q 190
            
Sbjct: 390 P 390


>gi|73668711|ref|YP_304726.1| GMP synthase subunit B [Methanosarcina barkeri str. Fusaro]
 gi|121697126|sp|Q46D96|GUAAB_METBF RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
          AltName: Full=GMP synthetase
 gi|72395873|gb|AAZ70146.1| GMP synthase (glutamine-hydrolyzing) [Methanosarcina barkeri str.
          Fusaro]
          Length = 305

 Score = 45.3 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
          K   A++  SGG DSS C   A      R++ +  D G   K E E    +   + 
Sbjct: 20 KDGRAIIALSGGVDSSVCAELAHRAIGGRLQPIYIDTGLMRKGETERIKHIFSHMN 75


>gi|220931051|ref|YP_002507959.1| GMP synthase (glutamine-hydrolyzing) [Halothermothrix orenii H 168]
 gi|254800102|sp|B8D0Z5|GUAA_HALOH RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|219992361|gb|ACL68964.1| GMP synthase (glutamine-hydrolyzing) [Halothermothrix orenii H 168]
          Length = 510

 Score = 45.3 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 57/181 (31%), Gaps = 22/181 (12%)

Query: 15  FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
            SGG DS+   +       D++  +  D+G   K E      V++  V+        +  
Sbjct: 222 LSGGVDSAVASTMVHRAIGDQLTCIFVDHGLLRKGE---AEQVKRTFVDEFNIPLVYVDA 278

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG-ITNIV 132
                  + G     +  K +  +                  +      A +LG    +V
Sbjct: 279 RERFLNRLNGVKDPETKRKIIGEEF-----------------IRVFEEEARKLGDARYLV 321

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
            G   +D         +TI++      L       +  PL  L K E  K+ + +G  D 
Sbjct: 322 QGTLYSDVIESGSETAETIKSHHNVGGLPDNMDFKLIEPLRNLFKDEVRKIGEVLGLPDE 381

Query: 193 V 193
           +
Sbjct: 382 I 382


>gi|301631825|ref|XP_002944995.1| PREDICTED: argininosuccinate synthase-like [Xenopus (Silurana)
          tropicalis]
          Length = 415

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 3/72 (4%)

Query: 1  MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I++  P      + FSGG D+S  L W  ++       + + GQ ++ + +      
Sbjct: 1  MTTILQNLPVGQKVGIAFSGGLDTSAALRWMKNKGALPYAYTANLGQPDEADYDAIPRKA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 MEYGAERARLID 72


>gi|255007776|ref|ZP_05279902.1| GMP synthase [Bacteroides fragilis 3_1_12]
 gi|313145481|ref|ZP_07807674.1| bifunctional GMP synthase/glutamine amidotransferase [Bacteroides
           fragilis 3_1_12]
 gi|313134248|gb|EFR51608.1| bifunctional GMP synthase/glutamine amidotransferase [Bacteroides
           fragilis 3_1_12]
          Length = 507

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 49/188 (26%), Gaps = 21/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS             +  +  D+G   K E +               
Sbjct: 213 NDKVVLGLSGGVDSSVAAVLLNKAIGKNLTCIFVDHGMLRKDEFK--------------- 257

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   H      L  I   +  K  +                     VF        
Sbjct: 258 -----NVMHDYECLGLNVIGVDASRKFFSELEGVTEPERKRKIIGKGFIDVFDEEAHKLK 312

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +  +  G    D           I++      L  + ++ +  PL  L K E  ++ ++
Sbjct: 313 DVKWLAQGTIYPDCIESLSITGTVIKSHHNVGGLPEKMNLKLCEPLRLLFKDEVRRVGRE 372

Query: 187 IGGQDLVN 194
           +G  + + 
Sbjct: 373 LGMPEHLI 380


>gi|296138640|ref|YP_003645883.1| GMP synthase, large subunit [Tsukamurella paurometabola DSM 20162]
 gi|296026774|gb|ADG77544.1| GMP synthase, large subunit [Tsukamurella paurometabola DSM 20162]
          Length = 519

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 53/184 (28%), Gaps = 14/184 (7%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A+   SGG DS+   +       DR+  +  D+G   + E   R  V+K  V        
Sbjct: 220 AICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRQGE---REQVQKDFVAATGARLV 276

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++  +      + G          V+                    +      A      
Sbjct: 277 TVDAEETFLSRLAG----------VSDPETKRKTIGELFIRSFEGAVSEVVGTADAKVEF 326

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +   T+  PL  L K E   + +++G 
Sbjct: 327 LVQGTLYPDVVESGGGAGTANIKSHHNVGGLPEDLEFTLVEPLRLLFKDEVRAVGRELGL 386

Query: 190 QDLV 193
            + +
Sbjct: 387 PEEI 390


>gi|254420777|ref|ZP_05034501.1| ExsB family [Brevundimonas sp. BAL3]
 gi|196186954|gb|EDX81930.1| ExsB family [Brevundimonas sp. BAL3]
          Length = 520

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 51/183 (27%), Gaps = 17/183 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS       +   D++  +  D G            + +K  +   +  
Sbjct: 224 KVICGLSGGVDSSVAAVLIHEAIGDQLTCVFVDTG------------LLRK--DEAKQVT 269

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E + +PL  +                +        V              A  L  
Sbjct: 270 TLFREHYNIPLVHVDASKEFLGELAGQSDPETKRKIIGRVFIEIFDREANKVEGAEFLAQ 329

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+  S         I++      L     + +  PL  L K E   L +++G
Sbjct: 330 GTLYPDVIESVSSSSGKAHV--IKSHHNVGGLPDYMKLKLVEPLRELFKDEVRALGRELG 387

Query: 189 GQD 191
             D
Sbjct: 388 LSD 390


>gi|158522502|ref|YP_001530372.1| argininosuccinate synthase [Desulfococcus oleovorans Hxd3]
 gi|158511328|gb|ABW68295.1| Argininosuccinate synthase [Desulfococcus oleovorans Hxd3]
          Length = 399

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQ 44
          +      +L +SGG D+S  L W ++     V T S D GQ
Sbjct: 1  MSDIKKVVLAYSGGLDTSVILKWLIETHDCEVITFSADIGQ 41


>gi|33594408|ref|NP_882052.1| argininosuccinate synthase [Bordetella pertussis Tohama I]
 gi|47605440|sp|Q7VTJ9|ASSY_BORPE RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|33564483|emb|CAE43796.1| argininosuccinate synthase [Bordetella pertussis Tohama I]
 gi|332383819|gb|AEE68666.1| argininosuccinate synthase [Bordetella pertussis CS]
          Length = 445

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEPDYDEIPRRAMQYGAEAARLVD 72


>gi|33597127|ref|NP_884770.1| argininosuccinate synthase [Bordetella parapertussis 12822]
 gi|33600971|ref|NP_888531.1| argininosuccinate synthase [Bordetella bronchiseptica RB50]
 gi|47605444|sp|Q7W7H8|ASSY_BORPA RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|47605449|sp|Q7WKW7|ASSY_BORBR RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|33566578|emb|CAE37835.1| argininosuccinate synthase [Bordetella parapertussis]
 gi|33575406|emb|CAE32483.1| argininosuccinate synthase [Bordetella bronchiseptica RB50]
          Length = 445

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEPDYDEIPRRAMQYGAEAARLVD 72


>gi|283836283|ref|ZP_06356024.1| argininosuccinate synthase [Citrobacter youngae ATCC 29220]
 gi|291067646|gb|EFE05755.1| argininosuccinate synthase [Citrobacter youngae ATCC 29220]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLVD 72


>gi|302381575|ref|YP_003817398.1| argininosuccinate synthase [Brevundimonas subvibrioides ATCC 15264]
 gi|302192203|gb|ADK99774.1| argininosuccinate synthase [Brevundimonas subvibrioides ATCC 15264]
          Length = 411

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 53/202 (26%), Gaps = 11/202 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K     +L +SGG D+S  L W    +   V T + D GQ  ++    R    K  ++  
Sbjct: 7   KPVKKVVLAYSGGLDTSIILKWLQTEYNAEVVTFTADLGQGEELAP-AREKALKMGIKPE 65

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             + D L E+ +            +        +   ++    +  R I         A 
Sbjct: 66  NIFIDDLREEFVRDFVF---PMFRANALYEGQYLLGTSIARPLIAKRQIEIARMVGADAV 122

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G T         +   Y       + A            +          K +     
Sbjct: 123 CHGATGKGNDQVRFELGYYALEPDIRVIAPWREWEYRSREALLDFAE-----KNQIPISK 177

Query: 185 QDIGGQDLVNLILEESHTCYLG 206
              G      +     H+   G
Sbjct: 178 DKRGEAPFS-VDANLLHSSSEG 198


>gi|237730091|ref|ZP_04560572.1| argininosuccinate synthetase [Citrobacter sp. 30_2]
 gi|226908697|gb|EEH94615.1| argininosuccinate synthetase [Citrobacter sp. 30_2]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLVD 72


>gi|217977562|ref|YP_002361709.1| argininosuccinate synthase [Methylocella silvestris BL2]
 gi|259585363|sp|B8ESL2|ASSY_METSB RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|217502938|gb|ACK50347.1| Argininosuccinate synthase [Methylocella silvestris BL2]
          Length = 416

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 32/83 (38%), Gaps = 4/83 (4%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
          M          +L +SGG D+S  L W        V T + D GQ  ++E   +  +   
Sbjct: 1  MPSKQSDIKKVVLAYSGGLDTSIILKWLETTYGCEVVTFTADLGQGEEIEPARQKAILLG 60

Query: 60 I---VELMPKWKDSLGEDHILPL 79
          +      +   ++    D++ P+
Sbjct: 61 VKPENIFIEDLREEFVRDYVFPM 83


>gi|156937500|ref|YP_001435296.1| PP-loop domain-containing protein [Ignicoccus hospitalis KIN4/I]
 gi|156566484|gb|ABU81889.1| PP-loop domain protein [Ignicoccus hospitalis KIN4/I]
          Length = 383

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 18/55 (32%), Gaps = 1/55 (1%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKIV 61
               LL  SGG+DS   L         V   + D        E E    V +++ 
Sbjct: 46  PKRVLLGLSGGKDSVALLYLLKKVGTEVVAATVDTVPNYTSLEAELAKRVAEELG 100


>gi|257076313|ref|ZP_05570674.1| GMP synthase subunit B [Ferroplasma acidarmanus fer1]
          Length = 306

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 66/197 (33%), Gaps = 24/197 (12%)

Query: 2   NDII--KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
            ++I  K     +L  SGGQDS+     A      +E +  D G     E++    + +K
Sbjct: 11  REMILSKLHGKGILACSGGQDSTLLSLIAAPI-KNIEIIFVDTGLLRLNEVDRVKSLFEK 69

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                   K  L +   + L  L  +      + +  K                 F+   
Sbjct: 70  FG-----VKYKLIDAKKIFLDNLKGVVDPETKRKIIGKT----------------FIDVF 108

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
              A   G T ++ G    D+        DTI++      L  +    +  PL  L K E
Sbjct: 109 KKEAETFGATYLLQGTIAPDWIESGGASRDTIKSHHNVGGLPADLGFELIEPLRDLYKDE 168

Query: 180 TWKLAQDIGGQDLVNLI 196
             ++++  G  D++   
Sbjct: 169 VREVSRYFGLPDVMPFP 185


>gi|62484872|emb|CAI78889.1| gmp synthase [uncultured bacterium]
          Length = 517

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 49/188 (26%), Gaps = 17/188 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +   SGG DSS   +       DR+  +  D G   + E        + +     
Sbjct: 216 PDERVICGLSGGVDSSVVAALLHRAIGDRLVCIFVDNGLLRRRE-------AELVEATFH 268

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  +   +          + L   V  + +   + + F+                 
Sbjct: 269 --GHFGMQLRAVD---ARQRFLTRLAGVVDPQEKRRIIGHEFIEVFKDEATRIEGARFLA 323

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G           +    P      I++      L  E    +  PL  L K E  ++  
Sbjct: 324 QGTIY----PDVIESGHGPTGHAAVIKSHHNVGALPKELGFELIEPLRLLFKDEVRQVGL 379

Query: 186 DIGGQDLV 193
            +G  + +
Sbjct: 380 ALGLPEDL 387


>gi|332999250|gb|EGK18836.1| argininosuccinate synthase [Shigella flexneri K-272]
 gi|333014972|gb|EGK34316.1| argininosuccinate synthase [Shigella flexneri K-227]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 72


>gi|332086097|gb|EGI91259.1| argininosuccinate synthase [Shigella boydii 5216-82]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 72


>gi|325498754|gb|EGC96613.1| argininosuccinate synthase [Escherichia fergusonii ECD227]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 72


>gi|324115223|gb|EGC09187.1| argininosuccinate synthase [Escherichia fergusonii B253]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 72


>gi|323966353|gb|EGB61787.1| argininosuccinate synthase [Escherichia coli M863]
 gi|327255188|gb|EGE66788.1| argininosuccinate synthase [Escherichia coli STEC_7v]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 72


>gi|320194657|gb|EFW69287.1| Argininosuccinate synthase [Escherichia coli WV_060327]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 72


>gi|319776018|ref|YP_004138506.1| argininosuccinate synthetase [Haemophilus influenzae F3047]
 gi|329123173|ref|ZP_08251742.1| argininosuccinate synthase [Haemophilus aegyptius ATCC 11116]
 gi|317450609|emb|CBY86828.1| argininosuccinate synthetase [Haemophilus influenzae F3047]
 gi|327471518|gb|EGF16962.1| argininosuccinate synthase [Haemophilus aegyptius ATCC 11116]
          Length = 444

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 22/65 (33%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          + K     + FSGG D+S  L W   +       + + GQ ++ +               
Sbjct: 9  LPKGQKVGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYNAIPKKAMAYGAEN 68

Query: 65 PKWKD 69
           +  D
Sbjct: 69 ARLID 73


>gi|301170479|emb|CBW30086.1| argininosuccinate synthetase [Haemophilus influenzae 10810]
          Length = 444

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 22/65 (33%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          + K     + FSGG D+S  L W   +       + + GQ ++ +               
Sbjct: 9  LPKGQKVGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYNAIPKKAMAYGAEN 68

Query: 65 PKWKD 69
           +  D
Sbjct: 69 ARLID 73


>gi|301644882|ref|ZP_07244854.1| argininosuccinate synthase [Escherichia coli MS 146-1]
 gi|301076827|gb|EFK91633.1| argininosuccinate synthase [Escherichia coli MS 146-1]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 72


>gi|295097660|emb|CBK86750.1| argininosuccinate synthase [Enterobacter cloacae subsp. cloacae
          NCTC 9394]
          Length = 448

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 72


>gi|293416603|ref|ZP_06659242.1| argininosuccinate synthase [Escherichia coli B185]
 gi|331654777|ref|ZP_08355777.1| argininosuccinate synthase [Escherichia coli M718]
 gi|291431959|gb|EFF04942.1| argininosuccinate synthase [Escherichia coli B185]
 gi|331048159|gb|EGI20236.1| argininosuccinate synthase [Escherichia coli M718]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 72


>gi|240115610|ref|ZP_04729672.1| tRNA(Ile)-lysidine synthase [Neisseria gonorrhoeae PID18]
 gi|260440579|ref|ZP_05794395.1| tRNA(Ile)-lysidine synthase [Neisseria gonorrhoeae DGI2]
          Length = 411

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/190 (11%), Positives = 41/190 (21%), Gaps = 31/190 (16%)

Query: 15  FSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            SGG DS   L              E L   +G                           
Sbjct: 3   LSGGLDSVVLLHLLVCAGKRAGFVPEALHIHHG-----LSPRADDWADFCRNYCDMLGVG 57

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           L    +        I  ++  K  A   +           R+     F   +A   G+  
Sbjct: 58  LETVKVCVEKNGLGIEAAARQKRYAAFAEKGFDVLALAHHRDDQIETFMLAVARGGGLRA 117

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +                                    +  PL+   + + W  A+  G  
Sbjct: 118 LAAMPAVRPLGENGI----------------------IWRPLLPFSRQDIWDYARKHGLP 155

Query: 191 DLVNLILEES 200
           ++ +    ++
Sbjct: 156 NIEDESNTDT 165


>gi|256828062|ref|YP_003156790.1| argininosuccinate synthase [Desulfomicrobium baculatum DSM 4028]
 gi|256577238|gb|ACU88374.1| argininosuccinate synthase [Desulfomicrobium baculatum DSM 4028]
          Length = 403

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 50/173 (28%), Gaps = 7/173 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + K    +L +SGG D+S  L W    +   V T++ D GQ  +++        +     
Sbjct: 1   MSKIEKVVLAYSGGLDTSAILKWIKKTYECEVITMTADLGQGEELDG------LEDKALS 54

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
               K  + +     ++        +        +   ++    +  R +   V     A
Sbjct: 55  TGATKAYVVDLQEEFVSDYVFPMFRANAVYEGGYLLGTSIARPLIAKRMVEIAVAEGAQA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
              G T         + S      H    A     +L   + +        + 
Sbjct: 115 VAHGATGKGNDQVRFELSTLALAPHLKTIAPWREWDLNSRTDLIAFCEENGIS 167


>gi|261342617|ref|ZP_05970475.1| argininosuccinate synthase [Enterobacter cancerogenus ATCC 35316]
 gi|288315265|gb|EFC54203.1| argininosuccinate synthase [Enterobacter cancerogenus ATCC 35316]
          Length = 448

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 72


>gi|224368988|ref|YP_002603152.1| GMP synthase [Desulfobacterium autotrophicum HRM2]
 gi|223691705|gb|ACN14988.1| GuaA1 [Desulfobacterium autotrophicum HRM2]
          Length = 509

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 49/186 (26%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              ++  SGG DSS             +  +  D G     E                  
Sbjct: 212 KKVIMGLSGGVDSSVAALLIHRAIGKNLYCIFVDNGLLRNNERTN--------------L 257

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           + SL     + +  +                +        +              A  LG
Sbjct: 258 EKSLTTHLDMNIRFVDARRLFLDQLAGVEDPEKKRKIIGNLFIDVFEDEAKKIDGAEFLG 317

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   + E+  +         I++      L  +  + +  PL +L K E  KL  ++
Sbjct: 318 QGTLYPDIIESKSAFGGPTS--IIKSHHNVGGLPEKMKLKLVEPLQFLFKDEVRKLGLEL 375

Query: 188 GGQDLV 193
           G  + +
Sbjct: 376 GLNENL 381


>gi|237808244|ref|YP_002892684.1| argininosuccinate synthase [Tolumonas auensis DSM 9187]
 gi|237500505|gb|ACQ93098.1| argininosuccinate synthase [Tolumonas auensis DSM 9187]
          Length = 442

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 72


>gi|218550456|ref|YP_002384247.1| argininosuccinate synthase [Escherichia fergusonii ATCC 35469]
 gi|226729186|sp|B7LR40|ASSY_ESCF3 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|218357997|emb|CAQ90643.1| argininosuccinate synthetase [Escherichia fergusonii ATCC 35469]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 72


>gi|215488489|ref|YP_002330920.1| argininosuccinate synthase [Escherichia coli O127:H6 str.
          E2348/69]
 gi|254807522|sp|B7UJ66|ASSY_ECO27 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|215266561|emb|CAS11000.1| argininosuccinate synthetase [Escherichia coli O127:H6 str.
          E2348/69]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 72


>gi|170765689|ref|ZP_02900500.1| argininosuccinate synthase [Escherichia albertii TW07627]
 gi|170124835|gb|EDS93766.1| argininosuccinate synthase [Escherichia albertii TW07627]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 72


>gi|145633659|ref|ZP_01789386.1| argininosuccinate synthase [Haemophilus influenzae 3655]
 gi|145635419|ref|ZP_01791120.1| argininosuccinate synthase [Haemophilus influenzae PittAA]
 gi|145637865|ref|ZP_01793511.1| hypothetical protein CGSHiHH_02816 [Haemophilus influenzae
          PittHH]
 gi|229845258|ref|ZP_04465391.1| argininosuccinate synthase [Haemophilus influenzae 6P18H1]
 gi|144985536|gb|EDJ92352.1| argininosuccinate synthase [Haemophilus influenzae 3655]
 gi|145267293|gb|EDK07296.1| argininosuccinate synthase [Haemophilus influenzae PittAA]
 gi|145268935|gb|EDK08892.1| hypothetical protein CGSHiHH_02816 [Haemophilus influenzae
          PittHH]
 gi|229811853|gb|EEP47549.1| argininosuccinate synthase [Haemophilus influenzae 6P18H1]
          Length = 444

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 22/65 (33%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          + K     + FSGG D+S  L W   +       + + GQ ++ +               
Sbjct: 9  LPKGQKVGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYNAIPKKAMAYGAEN 68

Query: 65 PKWKD 69
           +  D
Sbjct: 69 ARLID 73


>gi|145631857|ref|ZP_01787615.1| argininosuccinate synthase [Haemophilus influenzae R3021]
 gi|144982513|gb|EDJ90071.1| argininosuccinate synthase [Haemophilus influenzae R3021]
          Length = 445

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 22/65 (33%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          + K     + FSGG D+S  L W   +       + + GQ ++ +               
Sbjct: 9  LPKGQKVGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYNAIPKKAMAYGAEN 68

Query: 65 PKWKD 69
           +  D
Sbjct: 69 ARLID 73


>gi|146313243|ref|YP_001178317.1| argininosuccinate synthase [Enterobacter sp. 638]
 gi|166989391|sp|A4WEY6|ASSY_ENT38 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|145320119|gb|ABP62266.1| argininosuccinate synthase [Enterobacter sp. 638]
          Length = 448

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 72


>gi|118616681|ref|YP_905013.1| GMP synthase [Mycobacterium ulcerans Agy99]
 gi|118568791|gb|ABL03542.1| GMP synthase, GuaA [Mycobacterium ulcerans Agy99]
          Length = 527

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 54/184 (29%), Gaps = 16/184 (8%)

Query: 11  ALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A+   SGG DS+   +       DR+  +  D+G      L       +   + +   K 
Sbjct: 230 AICGLSGGVDSAVAAALVQRVIGDRLTCVFVDHG------LLRAGERAQVERDFVAATKA 283

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +L     + +A     + S +T     +            G     L          G  
Sbjct: 284 NLV---TVDVADTFLAALSGVTDPEGKRKIIGRQFIRAFEGAVRDVLDGRDVEFLVQGTL 340

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
              +                 I++      L  +   T+  PL  L K E   + +++G 
Sbjct: 341 YPDVVESGGGSGTA------NIKSHHNVGGLPDDLKFTLVEPLRLLFKDEVRAVGRELGL 394

Query: 190 QDLV 193
            + +
Sbjct: 395 PEEI 398


>gi|167039805|ref|YP_001662790.1| PP-loop domain-containing protein [Thermoanaerobacter sp. X514]
 gi|300915540|ref|ZP_07132850.1| PP-loop domain protein [Thermoanaerobacter sp. X561]
 gi|307724869|ref|YP_003904620.1| PP-loop domain-containing protein [Thermoanaerobacter sp. X513]
 gi|166854045|gb|ABY92454.1| PP-loop domain protein [Thermoanaerobacter sp. X514]
 gi|300888404|gb|EFK83556.1| PP-loop domain protein [Thermoanaerobacter sp. X561]
 gi|307581930|gb|ADN55329.1| PP-loop domain protein [Thermoanaerobacter sp. X513]
          Length = 300

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 18/42 (42%)

Query: 2  NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          N + KK    L++ SGG+DS       +     V  +  + G
Sbjct: 41 NKMFKKDDRVLVVVSGGKDSMALWDVLVKEGYNVVAMYINLG 82


>gi|91212594|ref|YP_542580.1| argininosuccinate synthase [Escherichia coli UTI89]
 gi|117625467|ref|YP_858790.1| argininosuccinate synthase [Escherichia coli APEC O1]
 gi|218560243|ref|YP_002393156.1| argininosuccinate synthase [Escherichia coli S88]
 gi|237706076|ref|ZP_04536557.1| argininosuccinate synthetase [Escherichia sp. 3_2_53FAA]
 gi|122422299|sp|Q1R6G5|ASSY_ECOUT RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|166219965|sp|A1AG76|ASSY_ECOK1 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|226729178|sp|B7MB92|ASSY_ECO45 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|91074168|gb|ABE09049.1| argininosuccinate synthetase [Escherichia coli UTI89]
 gi|115514591|gb|ABJ02666.1| argininosuccinate synthase [Escherichia coli APEC O1]
 gi|218367012|emb|CAR04783.1| argininosuccinate synthetase [Escherichia coli S88]
 gi|222034890|emb|CAP77633.1| Argininosuccinate synthase [Escherichia coli LF82]
 gi|226899116|gb|EEH85375.1| argininosuccinate synthetase [Escherichia sp. 3_2_53FAA]
 gi|294492363|gb|ADE91119.1| argininosuccinate synthase [Escherichia coli IHE3034]
 gi|307625228|gb|ADN69532.1| argininosuccinate synthase [Escherichia coli UM146]
 gi|312947730|gb|ADR28557.1| argininosuccinate synthase [Escherichia coli O83:H1 str. NRG
          857C]
 gi|315288926|gb|EFU48324.1| argininosuccinate synthase [Escherichia coli MS 110-3]
 gi|323951309|gb|EGB47184.1| argininosuccinate synthase [Escherichia coli H252]
 gi|323957680|gb|EGB53394.1| argininosuccinate synthase [Escherichia coli H263]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 72


>gi|145342|gb|AAA23482.1| argininosuccinate synthetase (argG; E.C. 6.8.4.5) [Escherichia
          coli]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 72


>gi|68250325|ref|YP_249437.1| argininosuccinate synthase [Haemophilus influenzae 86-028NP]
 gi|148825734|ref|YP_001290487.1| argininosuccinate synthase [Haemophilus influenzae PittEE]
 gi|229847344|ref|ZP_04467446.1| argininosuccinate synthase [Haemophilus influenzae 7P49H1]
 gi|319896789|ref|YP_004134983.1| argininosuccinate synthetase [Haemophilus influenzae F3031]
 gi|81335255|sp|Q4QJM0|ASSY_HAEI8 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|166219968|sp|A5UBF3|ASSY_HAEIE RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|68058524|gb|AAX88777.1| argininosuccinate synthase [Haemophilus influenzae 86-028NP]
 gi|148715894|gb|ABQ98104.1| argininosuccinate synthase [Haemophilus influenzae PittEE]
 gi|229809769|gb|EEP45493.1| argininosuccinate synthase [Haemophilus influenzae 7P49H1]
 gi|317432292|emb|CBY80645.1| argininosuccinate synthetase [Haemophilus influenzae F3031]
          Length = 444

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 22/65 (33%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          + K     + FSGG D+S  L W   +       + + GQ ++ +               
Sbjct: 9  LPKGQKVGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYNAIPKKAMAYGAEN 68

Query: 65 PKWKD 69
           +  D
Sbjct: 69 ARLID 73


>gi|15803713|ref|NP_289747.1| argininosuccinate synthase [Escherichia coli O157:H7 EDL933]
 gi|15833306|ref|NP_312079.1| argininosuccinate synthase [Escherichia coli O157:H7 str. Sakai]
 gi|168749234|ref|ZP_02774256.1| argininosuccinate synthase [Escherichia coli O157:H7 str. EC4113]
 gi|168754152|ref|ZP_02779159.1| argininosuccinate synthase [Escherichia coli O157:H7 str. EC4401]
 gi|168769589|ref|ZP_02794596.1| argininosuccinate synthase [Escherichia coli O157:H7 str. EC4486]
 gi|168773162|ref|ZP_02798169.1| argininosuccinate synthase [Escherichia coli O157:H7 str. EC4196]
 gi|168781314|ref|ZP_02806321.1| argininosuccinate synthase [Escherichia coli O157:H7 str. EC4076]
 gi|168786056|ref|ZP_02811063.1| argininosuccinate synthase [Escherichia coli O157:H7 str. EC869]
 gi|168797772|ref|ZP_02822779.1| argininosuccinate synthase [Escherichia coli O157:H7 str. EC508]
 gi|195938391|ref|ZP_03083773.1| argininosuccinate synthase [Escherichia coli O157:H7 str. EC4024]
 gi|208806262|ref|ZP_03248599.1| argininosuccinate synthase [Escherichia coli O157:H7 str. EC4206]
 gi|208812598|ref|ZP_03253927.1| argininosuccinate synthase [Escherichia coli O157:H7 str. EC4045]
 gi|208821908|ref|ZP_03262228.1| argininosuccinate synthase [Escherichia coli O157:H7 str. EC4042]
 gi|209396632|ref|YP_002272643.1| argininosuccinate synthase [Escherichia coli O157:H7 str. EC4115]
 gi|217327942|ref|ZP_03444025.1| argininosuccinate synthase [Escherichia coli O157:H7 str.
          TW14588]
 gi|254795122|ref|YP_003079959.1| argininosuccinate synthase [Escherichia coli O157:H7 str.
          TW14359]
 gi|261228183|ref|ZP_05942464.1| argininosuccinate synthetase [Escherichia coli O157:H7 str.
          FRIK2000]
 gi|261255039|ref|ZP_05947572.1| argininosuccinate synthetase [Escherichia coli O157:H7 str.
          FRIK966]
 gi|291284547|ref|YP_003501365.1| Argininosuccinate synthase [Escherichia coli O55:H7 str. CB9615]
 gi|21263424|sp|Q8X9M0|ASSY_ECO57 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|226729179|sp|B5YS62|ASSY_ECO5E RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|12517785|gb|AAG58307.1|AE005546_1 argininosuccinate synthetase [Escherichia coli O157:H7 str.
          EDL933]
 gi|13363525|dbj|BAB37475.1| argininosuccinate synthetase [Escherichia coli O157:H7 str.
          Sakai]
 gi|187770937|gb|EDU34781.1| argininosuccinate synthase [Escherichia coli O157:H7 str. EC4196]
 gi|188016407|gb|EDU54529.1| argininosuccinate synthase [Escherichia coli O157:H7 str. EC4113]
 gi|189000979|gb|EDU69965.1| argininosuccinate synthase [Escherichia coli O157:H7 str. EC4076]
 gi|189358632|gb|EDU77051.1| argininosuccinate synthase [Escherichia coli O157:H7 str. EC4401]
 gi|189361424|gb|EDU79843.1| argininosuccinate synthase [Escherichia coli O157:H7 str. EC4486]
 gi|189374213|gb|EDU92629.1| argininosuccinate synthase [Escherichia coli O157:H7 str. EC869]
 gi|189379814|gb|EDU98230.1| argininosuccinate synthase [Escherichia coli O157:H7 str. EC508]
 gi|208726063|gb|EDZ75664.1| argininosuccinate synthase [Escherichia coli O157:H7 str. EC4206]
 gi|208733875|gb|EDZ82562.1| argininosuccinate synthase [Escherichia coli O157:H7 str. EC4045]
 gi|208742031|gb|EDZ89713.1| argininosuccinate synthase [Escherichia coli O157:H7 str. EC4042]
 gi|209158032|gb|ACI35465.1| argininosuccinate synthase [Escherichia coli O157:H7 str. EC4115]
 gi|209758308|gb|ACI77466.1| argininosuccinate synthetase [Escherichia coli]
 gi|209758310|gb|ACI77467.1| argininosuccinate synthetase [Escherichia coli]
 gi|209758312|gb|ACI77468.1| argininosuccinate synthetase [Escherichia coli]
 gi|209758314|gb|ACI77469.1| argininosuccinate synthetase [Escherichia coli]
 gi|209758316|gb|ACI77470.1| argininosuccinate synthetase [Escherichia coli]
 gi|217320309|gb|EEC28734.1| argininosuccinate synthase [Escherichia coli O157:H7 str.
          TW14588]
 gi|254594522|gb|ACT73883.1| argininosuccinate synthetase [Escherichia coli O157:H7 str.
          TW14359]
 gi|290764420|gb|ADD58381.1| Argininosuccinate synthase [Escherichia coli O55:H7 str. CB9615]
 gi|320189526|gb|EFW64185.1| Argininosuccinate synthase [Escherichia coli O157:H7 str. EC1212]
 gi|320640243|gb|EFX09815.1| argininosuccinate synthase [Escherichia coli O157:H7 str. G5101]
 gi|320645540|gb|EFX14549.1| argininosuccinate synthase [Escherichia coli O157:H- str. 493-89]
 gi|320650850|gb|EFX19307.1| argininosuccinate synthase [Escherichia coli O157:H- str. H 2687]
 gi|320656231|gb|EFX24143.1| argininosuccinate synthase [Escherichia coli O55:H7 str. 3256-97
          TW 07815]
 gi|320661921|gb|EFX29329.1| argininosuccinate synthase [Escherichia coli O55:H7 str. USDA
          5905]
 gi|320666756|gb|EFX33735.1| argininosuccinate synthase [Escherichia coli O157:H7 str. LSU-61]
 gi|326337873|gb|EGD61707.1| Argininosuccinate synthase [Escherichia coli O157:H7 str. 1125]
 gi|326347443|gb|EGD71168.1| Argininosuccinate synthase [Escherichia coli O157:H7 str. 1044]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 72


>gi|24114463|ref|NP_708973.1| argininosuccinate synthase [Shigella flexneri 2a str. 301]
 gi|30064511|ref|NP_838682.1| argininosuccinate synthase [Shigella flexneri 2a str. 2457T]
 gi|110807040|ref|YP_690560.1| argininosuccinate synthase [Shigella flexneri 5 str. 8401]
 gi|30172781|sp|P59609|ASSY_SHIFL RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|123342476|sp|Q0T0B0|ASSY_SHIF8 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|24053645|gb|AAN44680.1| argininosuccinate synthetase [Shigella flexneri 2a str. 301]
 gi|30042770|gb|AAP18493.1| argininosuccinate synthetase [Shigella flexneri 2a str. 2457T]
 gi|110616588|gb|ABF05255.1| argininosuccinate synthetase [Shigella flexneri 5 str. 8401]
 gi|281602556|gb|ADA75540.1| Argininosuccinate synthase [Shigella flexneri 2002017]
 gi|313648586|gb|EFS13028.1| argininosuccinate synthase [Shigella flexneri 2a str. 2457T]
 gi|332752331|gb|EGJ82721.1| argininosuccinate synthase [Shigella flexneri 4343-70]
 gi|332752858|gb|EGJ83243.1| argininosuccinate synthase [Shigella flexneri K-671]
 gi|332754729|gb|EGJ85095.1| argininosuccinate synthase [Shigella flexneri 2747-71]
 gi|332765168|gb|EGJ95395.1| argininosuccinate synthase [Shigella flexneri 2930-71]
 gi|332998813|gb|EGK18409.1| argininosuccinate synthase [Shigella flexneri VA-6]
 gi|332999963|gb|EGK19546.1| argininosuccinate synthase [Shigella flexneri K-218]
 gi|333014592|gb|EGK33939.1| argininosuccinate synthase [Shigella flexneri K-304]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 72


>gi|16273613|ref|NP_439868.1| argininosuccinate synthase [Haemophilus influenzae Rd KW20]
 gi|148827144|ref|YP_001291897.1| argininosuccinate synthase [Haemophilus influenzae PittGG]
 gi|260581067|ref|ZP_05848889.1| argininosuccinate synthase [Haemophilus influenzae RdAW]
 gi|1168540|sp|P44315|ASSY_HAEIN RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|166219969|sp|A5UFF8|ASSY_HAEIG RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|1574583|gb|AAC23373.1| argininosuccinate synthetase (argG) [Haemophilus influenzae Rd
          KW20]
 gi|148718386|gb|ABQ99513.1| argininosuccinate synthase [Haemophilus influenzae PittGG]
 gi|260092307|gb|EEW76248.1| argininosuccinate synthase [Haemophilus influenzae RdAW]
          Length = 444

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 22/65 (33%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          + K     + FSGG D+S  L W   +       + + GQ ++ +               
Sbjct: 9  LPKGQKVGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYNAIPKKAMAYGAEN 68

Query: 65 PKWKD 69
           +  D
Sbjct: 69 ARLID 73


>gi|17943194|pdb|1K97|A Chain A, Crystal Structure Of E. Coli Argininosuccinate
          Synthetase In Complex With Aspartate And Citrulline
 gi|17943198|pdb|1K92|A Chain A, Crystal Structure Of Uncomplexed E. Coli
          Argininosuccinate Synthetase
 gi|20664153|pdb|1KP2|A Chain A, Crystal Structure Of E. Coli Argininosuccinate
          Synthetase In Complex With Atp
 gi|20664156|pdb|1KP3|A Chain A, Crystal Structure Of E. Coli Argininosuccinate
          Synthetase In Complex With Atp And Citrulline
          Length = 455

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 15 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 71


>gi|193067275|ref|ZP_03048243.1| argininosuccinate synthase [Escherichia coli E110019]
 gi|194433745|ref|ZP_03066020.1| argininosuccinate synthase [Shigella dysenteriae 1012]
 gi|293449507|ref|ZP_06663928.1| argininosuccinate synthase [Escherichia coli B088]
 gi|192959232|gb|EDV89667.1| argininosuccinate synthase [Escherichia coli E110019]
 gi|194418008|gb|EDX34102.1| argininosuccinate synthase [Shigella dysenteriae 1012]
 gi|291322597|gb|EFE62026.1| argininosuccinate synthase [Escherichia coli B088]
 gi|320181447|gb|EFW56365.1| Argininosuccinate synthase [Shigella boydii ATCC 9905]
 gi|323173568|gb|EFZ59197.1| argininosuccinate synthase [Escherichia coli LT-68]
 gi|323183127|gb|EFZ68525.1| argininosuccinate synthase [Escherichia coli 1357]
 gi|323946973|gb|EGB42989.1| argininosuccinate synthase [Escherichia coli H120]
 gi|332086418|gb|EGI91565.1| argininosuccinate synthase [Shigella dysenteriae 155-74]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 72


>gi|157155966|ref|YP_001464648.1| argininosuccinate synthase [Escherichia coli E24377A]
 gi|191168048|ref|ZP_03029848.1| argininosuccinate synthase [Escherichia coli B7A]
 gi|209920648|ref|YP_002294732.1| argininosuccinate synthase [Escherichia coli SE11]
 gi|218696878|ref|YP_002404545.1| argininosuccinate synthase [Escherichia coli 55989]
 gi|256018909|ref|ZP_05432774.1| argininosuccinate synthase [Shigella sp. D9]
 gi|260857300|ref|YP_003231191.1| argininosuccinate synthetase [Escherichia coli O26:H11 str.
          11368]
 gi|260869923|ref|YP_003236325.1| argininosuccinate synthetase [Escherichia coli O111:H- str.
          11128]
 gi|300817576|ref|ZP_07097792.1| argininosuccinate synthase [Escherichia coli MS 107-1]
 gi|300823865|ref|ZP_07103989.1| argininosuccinate synthase [Escherichia coli MS 119-7]
 gi|300926089|ref|ZP_07141907.1| argininosuccinate synthase [Escherichia coli MS 182-1]
 gi|301326406|ref|ZP_07219760.1| argininosuccinate synthase [Escherichia coli MS 78-1]
 gi|307313122|ref|ZP_07592748.1| argininosuccinate synthase [Escherichia coli W]
 gi|309793750|ref|ZP_07688176.1| argininosuccinate synthase [Escherichia coli MS 145-7]
 gi|331670000|ref|ZP_08370845.1| argininosuccinate synthase [Escherichia coli TA271]
 gi|331679252|ref|ZP_08379924.1| argininosuccinate synthase [Escherichia coli H591]
 gi|332279997|ref|ZP_08392410.1| argininosuccinate synthase [Shigella sp. D9]
 gi|166989389|sp|A7ZS69|ASSY_ECO24 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|226729184|sp|B6I1P6|ASSY_ECOSE RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|254807523|sp|B7LHN6|ASSY_ECO55 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|157077996|gb|ABV17704.1| argininosuccinate synthase [Escherichia coli E24377A]
 gi|190901917|gb|EDV61666.1| argininosuccinate synthase [Escherichia coli B7A]
 gi|209913907|dbj|BAG78981.1| argininosuccinate synthase [Escherichia coli SE11]
 gi|218353610|emb|CAU99803.1| argininosuccinate synthetase [Escherichia coli 55989]
 gi|257755949|dbj|BAI27451.1| argininosuccinate synthetase [Escherichia coli O26:H11 str.
          11368]
 gi|257766279|dbj|BAI37774.1| argininosuccinate synthetase [Escherichia coli O111:H- str.
          11128]
 gi|300417854|gb|EFK01165.1| argininosuccinate synthase [Escherichia coli MS 182-1]
 gi|300523633|gb|EFK44702.1| argininosuccinate synthase [Escherichia coli MS 119-7]
 gi|300529874|gb|EFK50936.1| argininosuccinate synthase [Escherichia coli MS 107-1]
 gi|300846895|gb|EFK74655.1| argininosuccinate synthase [Escherichia coli MS 78-1]
 gi|306907033|gb|EFN37541.1| argininosuccinate synthase [Escherichia coli W]
 gi|308122707|gb|EFO59969.1| argininosuccinate synthase [Escherichia coli MS 145-7]
 gi|315062479|gb|ADT76806.1| argininosuccinate synthetase [Escherichia coli W]
 gi|323154386|gb|EFZ40587.1| argininosuccinate synthase [Escherichia coli EPECa14]
 gi|323178884|gb|EFZ64460.1| argininosuccinate synthase [Escherichia coli 1180]
 gi|323376933|gb|ADX49201.1| argininosuccinate synthase [Escherichia coli KO11]
 gi|324018304|gb|EGB87523.1| argininosuccinate synthase [Escherichia coli MS 117-3]
 gi|324119538|gb|EGC13420.1| argininosuccinate synthase [Escherichia coli E1167]
 gi|331062913|gb|EGI34827.1| argininosuccinate synthase [Escherichia coli TA271]
 gi|331073317|gb|EGI44640.1| argininosuccinate synthase [Escherichia coli H591]
 gi|332102349|gb|EGJ05695.1| argininosuccinate synthase [Shigella sp. D9]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 72


>gi|82545589|ref|YP_409536.1| argininosuccinate synthase [Shigella boydii Sb227]
 gi|187733659|ref|YP_001881912.1| argininosuccinate synthase [Shigella boydii CDC 3083-94]
 gi|123558565|sp|Q31W50|ASSY_SHIBS RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|226729208|sp|B2U204|ASSY_SHIB3 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|81247000|gb|ABB67708.1| argininosuccinate synthetase [Shigella boydii Sb227]
 gi|187430651|gb|ACD09925.1| argininosuccinate synthase [Shigella boydii CDC 3083-94]
 gi|320175535|gb|EFW50631.1| Argininosuccinate synthase [Shigella dysenteriae CDC 74-1112]
 gi|320186660|gb|EFW61384.1| Argininosuccinate synthase [Shigella flexneri CDC 796-83]
 gi|332090676|gb|EGI95770.1| argininosuccinate synthase [Shigella boydii 3594-74]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 72


>gi|74313710|ref|YP_312129.1| argininosuccinate synthase [Shigella sonnei Ss046]
 gi|193061997|ref|ZP_03043093.1| argininosuccinate synthase [Escherichia coli E22]
 gi|194430225|ref|ZP_03062723.1| argininosuccinate synthase [Escherichia coli B171]
 gi|218555743|ref|YP_002388656.1| argininosuccinate synthase [Escherichia coli IAI1]
 gi|260845986|ref|YP_003223764.1| argininosuccinate synthetase [Escherichia coli O103:H2 str.
          12009]
 gi|300904357|ref|ZP_07122210.1| argininosuccinate synthase [Escherichia coli MS 84-1]
 gi|300918927|ref|ZP_07135486.1| argininosuccinate synthase [Escherichia coli MS 115-1]
 gi|301301772|ref|ZP_07207906.1| argininosuccinate synthase [Escherichia coli MS 124-1]
 gi|123616073|sp|Q3YX68|ASSY_SHISS RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|226729181|sp|B7M079|ASSY_ECO8A RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|73857187|gb|AAZ89894.1| argininosuccinate synthetase [Shigella sonnei Ss046]
 gi|192932217|gb|EDV84815.1| argininosuccinate synthase [Escherichia coli E22]
 gi|194411726|gb|EDX28050.1| argininosuccinate synthase [Escherichia coli B171]
 gi|218362511|emb|CAR00135.1| argininosuccinate synthetase [Escherichia coli IAI1]
 gi|257761133|dbj|BAI32630.1| argininosuccinate synthetase [Escherichia coli O103:H2 str.
          12009]
 gi|300403708|gb|EFJ87246.1| argininosuccinate synthase [Escherichia coli MS 84-1]
 gi|300413953|gb|EFJ97263.1| argininosuccinate synthase [Escherichia coli MS 115-1]
 gi|300842753|gb|EFK70513.1| argininosuccinate synthase [Escherichia coli MS 124-1]
 gi|315257098|gb|EFU37066.1| argininosuccinate synthase [Escherichia coli MS 85-1]
 gi|323162865|gb|EFZ48700.1| argininosuccinate synthase [Escherichia coli E128010]
 gi|323165131|gb|EFZ50921.1| argininosuccinate synthase [Shigella sonnei 53G]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 72


>gi|145629176|ref|ZP_01784975.1| argininosuccinate synthase [Haemophilus influenzae 22.1-21]
 gi|145639120|ref|ZP_01794727.1| argininosuccinate synthase [Haemophilus influenzae PittII]
 gi|260582825|ref|ZP_05850611.1| argininosuccinate synthase [Haemophilus influenzae NT127]
 gi|144978679|gb|EDJ88402.1| argininosuccinate synthase [Haemophilus influenzae 22.1-21]
 gi|145271682|gb|EDK11592.1| argininosuccinate synthase [Haemophilus influenzae PittII]
 gi|260094151|gb|EEW78053.1| argininosuccinate synthase [Haemophilus influenzae NT127]
 gi|309750701|gb|ADO80685.1| Argininosuccinate synthetase [Haemophilus influenzae R2866]
          Length = 444

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 22/65 (33%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          + K     + FSGG D+S  L W   +       + + GQ ++ +               
Sbjct: 9  LPKGQKVGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYNAIPKKAMAYGAEN 68

Query: 65 PKWKD 69
           +  D
Sbjct: 69 ARLID 73


>gi|309972881|gb|ADO96082.1| Argininosuccinate synthetase [Haemophilus influenzae R2846]
          Length = 444

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 22/65 (33%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          + K     + FSGG D+S  L W   +       + + GQ ++ +               
Sbjct: 9  LPKGQKVGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYNAIPKKAMAYGAEN 68

Query: 65 PKWKD 69
           +  D
Sbjct: 69 ARLID 73


>gi|16131063|ref|NP_417640.1| argininosuccinate synthetase [Escherichia coli str. K-12 substr.
          MG1655]
 gi|26249756|ref|NP_755796.1| argininosuccinate synthase [Escherichia coli CFT073]
 gi|89109936|ref|AP_003716.1| argininosuccinate synthetase [Escherichia coli str. K-12 substr.
          W3110]
 gi|110643412|ref|YP_671142.1| argininosuccinate synthase [Escherichia coli 536]
 gi|170082708|ref|YP_001732028.1| argininosuccinate synthetase [Escherichia coli str. K-12 substr.
          DH10B]
 gi|170681371|ref|YP_001745445.1| argininosuccinate synthase [Escherichia coli SMS-3-5]
 gi|188493200|ref|ZP_03000470.1| argininosuccinate synthase [Escherichia coli 53638]
 gi|191172166|ref|ZP_03033709.1| argininosuccinate synthase [Escherichia coli F11]
 gi|218691463|ref|YP_002399675.1| argininosuccinate synthase [Escherichia coli ED1a]
 gi|218701942|ref|YP_002409571.1| argininosuccinate synthase [Escherichia coli IAI39]
 gi|218706793|ref|YP_002414312.1| argininosuccinate synthase [Escherichia coli UMN026]
 gi|227887894|ref|ZP_04005699.1| argininosuccinate synthetase [Escherichia coli 83972]
 gi|238902275|ref|YP_002928071.1| argininosuccinate synthetase [Escherichia coli BW2952]
 gi|254038337|ref|ZP_04872395.1| argininosuccinate synthase [Escherichia sp. 1_1_43]
 gi|256024253|ref|ZP_05438118.1| argininosuccinate synthase [Escherichia sp. 4_1_40B]
 gi|293406782|ref|ZP_06650708.1| argininosuccinate synthase [Escherichia coli FVEC1412]
 gi|293412545|ref|ZP_06655268.1| argininosuccinate synthase [Escherichia coli B354]
 gi|298382523|ref|ZP_06992120.1| argininosuccinate synthase [Escherichia coli FVEC1302]
 gi|300897936|ref|ZP_07116315.1| argininosuccinate synthase [Escherichia coli MS 198-1]
 gi|300938082|ref|ZP_07152860.1| argininosuccinate synthase [Escherichia coli MS 21-1]
 gi|300948821|ref|ZP_07162889.1| argininosuccinate synthase [Escherichia coli MS 116-1]
 gi|300955757|ref|ZP_07168102.1| argininosuccinate synthase [Escherichia coli MS 175-1]
 gi|300977838|ref|ZP_07174078.1| argininosuccinate synthase [Escherichia coli MS 200-1]
 gi|300990772|ref|ZP_07179344.1| argininosuccinate synthase [Escherichia coli MS 45-1]
 gi|301022026|ref|ZP_07185969.1| argininosuccinate synthase [Escherichia coli MS 69-1]
 gi|301025984|ref|ZP_07189466.1| argininosuccinate synthase [Escherichia coli MS 196-1]
 gi|301047985|ref|ZP_07195027.1| argininosuccinate synthase [Escherichia coli MS 185-1]
 gi|306816485|ref|ZP_07450617.1| argininosuccinate synthase [Escherichia coli NC101]
 gi|307139858|ref|ZP_07499214.1| argininosuccinate synthase [Escherichia coli H736]
 gi|312968490|ref|ZP_07782699.1| argininosuccinate synthase [Escherichia coli 2362-75]
 gi|331643871|ref|ZP_08345002.1| argininosuccinate synthase [Escherichia coli H736]
 gi|331648972|ref|ZP_08350060.1| argininosuccinate synthase [Escherichia coli M605]
 gi|331659460|ref|ZP_08360402.1| argininosuccinate synthase [Escherichia coli TA206]
 gi|331664785|ref|ZP_08365690.1| argininosuccinate synthase [Escherichia coli TA143]
 gi|331674709|ref|ZP_08375468.1| argininosuccinate synthase [Escherichia coli TA280]
 gi|331684820|ref|ZP_08385412.1| argininosuccinate synthase [Escherichia coli H299]
 gi|67462172|sp|P0A6E4|ASSY_ECOLI RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|67462173|sp|P0A6E5|ASSY_ECOL6 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|123048825|sp|Q0TCT8|ASSY_ECOL5 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|226729180|sp|B7NKP0|ASSY_ECO7I RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|226729182|sp|B1XGY3|ASSY_ECODH RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|226729183|sp|B7NDF7|ASSY_ECOLU RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|226729185|sp|B1LFS3|ASSY_ECOSM RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|254807524|sp|B7N0V6|ASSY_ECO81 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|259585355|sp|C4ZSR2|ASSY_ECOBW RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|26110184|gb|AAN82370.1|AE016767_130 Argininosuccinate synthase [Escherichia coli CFT073]
 gi|606111|gb|AAA57974.1| argininosuccinate synthetase [Escherichia coli str. K-12 substr.
          MG1655]
 gi|1789563|gb|AAC76205.1| argininosuccinate synthetase [Escherichia coli str. K-12 substr.
          MG1655]
 gi|85675967|dbj|BAE77217.1| argininosuccinate synthetase [Escherichia coli str. K12 substr.
          W3110]
 gi|110345004|gb|ABG71241.1| argininosuccinate synthase [Escherichia coli 536]
 gi|169890543|gb|ACB04250.1| argininosuccinate synthetase [Escherichia coli str. K-12 substr.
          DH10B]
 gi|170519089|gb|ACB17267.1| argininosuccinate synthase [Escherichia coli SMS-3-5]
 gi|188488399|gb|EDU63502.1| argininosuccinate synthase [Escherichia coli 53638]
 gi|190907476|gb|EDV67072.1| argininosuccinate synthase [Escherichia coli F11]
 gi|218371928|emb|CAR19784.1| argininosuccinate synthetase [Escherichia coli IAI39]
 gi|218429027|emb|CAR09974.2| argininosuccinate synthetase [Escherichia coli ED1a]
 gi|218433890|emb|CAR14807.1| argininosuccinate synthetase [Escherichia coli UMN026]
 gi|226839961|gb|EEH71982.1| argininosuccinate synthase [Escherichia sp. 1_1_43]
 gi|227835290|gb|EEJ45756.1| argininosuccinate synthetase [Escherichia coli 83972]
 gi|238860013|gb|ACR62011.1| argininosuccinate synthetase [Escherichia coli BW2952]
 gi|260447800|gb|ACX38222.1| Argininosuccinate synthase [Escherichia coli DH1]
 gi|281180215|dbj|BAI56545.1| argininosuccinate synthetase [Escherichia coli SE15]
 gi|284923195|emb|CBG36289.1| argininosuccinate synthetase [Escherichia coli 042]
 gi|291426788|gb|EFE99820.1| argininosuccinate synthase [Escherichia coli FVEC1412]
 gi|291469316|gb|EFF11807.1| argininosuccinate synthase [Escherichia coli B354]
 gi|298277663|gb|EFI19179.1| argininosuccinate synthase [Escherichia coli FVEC1302]
 gi|299879879|gb|EFI88090.1| argininosuccinate synthase [Escherichia coli MS 196-1]
 gi|300300128|gb|EFJ56513.1| argininosuccinate synthase [Escherichia coli MS 185-1]
 gi|300308215|gb|EFJ62735.1| argininosuccinate synthase [Escherichia coli MS 200-1]
 gi|300317390|gb|EFJ67174.1| argininosuccinate synthase [Escherichia coli MS 175-1]
 gi|300358366|gb|EFJ74236.1| argininosuccinate synthase [Escherichia coli MS 198-1]
 gi|300397741|gb|EFJ81279.1| argininosuccinate synthase [Escherichia coli MS 69-1]
 gi|300407080|gb|EFJ90618.1| argininosuccinate synthase [Escherichia coli MS 45-1]
 gi|300451710|gb|EFK15330.1| argininosuccinate synthase [Escherichia coli MS 116-1]
 gi|300456942|gb|EFK20435.1| argininosuccinate synthase [Escherichia coli MS 21-1]
 gi|305850050|gb|EFM50509.1| argininosuccinate synthase [Escherichia coli NC101]
 gi|307555267|gb|ADN48042.1| argininosuccinate synthetase [Escherichia coli ABU 83972]
 gi|309703599|emb|CBJ02939.1| argininosuccinate synthetase [Escherichia coli ETEC H10407]
 gi|312286708|gb|EFR14619.1| argininosuccinate synthase [Escherichia coli 2362-75]
 gi|315137759|dbj|BAJ44918.1| argininosuccinate synthase [Escherichia coli DH1]
 gi|315294917|gb|EFU54256.1| argininosuccinate synthase [Escherichia coli MS 153-1]
 gi|315297877|gb|EFU57147.1| argininosuccinate synthase [Escherichia coli MS 16-3]
 gi|315617255|gb|EFU97864.1| argininosuccinate synthase [Escherichia coli 3431]
 gi|323189206|gb|EFZ74490.1| argininosuccinate synthase [Escherichia coli RN587/1]
 gi|323936133|gb|EGB32427.1| argininosuccinate synthase [Escherichia coli E1520]
 gi|323979110|gb|EGB74188.1| argininosuccinate synthase [Escherichia coli TW10509]
 gi|324008771|gb|EGB77990.1| argininosuccinate synthase [Escherichia coli MS 57-2]
 gi|324012102|gb|EGB81321.1| argininosuccinate synthase [Escherichia coli MS 60-1]
 gi|330909227|gb|EGH37741.1| argininosuccinate synthase [Escherichia coli AA86]
 gi|331037342|gb|EGI09566.1| argininosuccinate synthase [Escherichia coli H736]
 gi|331042719|gb|EGI14861.1| argininosuccinate synthase [Escherichia coli M605]
 gi|331054042|gb|EGI26071.1| argininosuccinate synthase [Escherichia coli TA206]
 gi|331058033|gb|EGI30015.1| argininosuccinate synthase [Escherichia coli TA143]
 gi|331068148|gb|EGI39544.1| argininosuccinate synthase [Escherichia coli TA280]
 gi|331078435|gb|EGI49641.1| argininosuccinate synthase [Escherichia coli H299]
 gi|332345129|gb|AEE58463.1| argininosuccinate synthase ArgG [Escherichia coli UMNK88]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 72


>gi|307291609|ref|ZP_07571485.1| GMP synthase protein [Enterococcus faecalis TX0411]
 gi|306497370|gb|EFM66911.1| GMP synthase protein [Enterococcus faecalis TX0411]
          Length = 520

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 59/186 (31%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V + +       
Sbjct: 223 KKVLLGLSGGVDSSVVGVLLQKAIGDQLTCIFVDHGLLRKGE---AEQVMESLGGKFGLN 279

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    +      +   S L      + +   + N FV   +      A  LA   G
Sbjct: 280 ---------IIKVDAKERFLSKLVGVSDPEQKRKIIGNEFVYVFDD----EATKLAGEEG 326

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           ++ +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 327 VSFLAQGTLYTDVIESGTETAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRALGTEL 386

Query: 188 GGQDLV 193
           G  D +
Sbjct: 387 GMPDAI 392


>gi|304407668|ref|ZP_07389319.1| argininosuccinate synthase [Paenibacillus curdlanolyticus YK9]
 gi|304343151|gb|EFM08994.1| argininosuccinate synthase [Paenibacillus curdlanolyticus YK9]
          Length = 411

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVR 57
              +L +SGG D+S  L W  + +D  +   + D GQ+ +++      + 
Sbjct: 3  KEKIVLAYSGGLDTSVILKWLKETYDAEIIAFTADIGQKEELDGLEAKALA 53


>gi|256855130|ref|ZP_05560491.1| bifunctional GMP synthase/glutamine amidotransferase [Enterococcus
           faecalis T8]
 gi|256709643|gb|EEU24690.1| bifunctional GMP synthase/glutamine amidotransferase [Enterococcus
           faecalis T8]
 gi|315028785|gb|EFT40717.1| GMP synthase protein [Enterococcus faecalis TX4000]
          Length = 520

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 59/186 (31%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V + +       
Sbjct: 223 KKVLLGLSGGVDSSVVGVLLQKAIGDQLTCIFVDHGLLRKGE---AEQVMESLGGKFGLN 279

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    +      +   S L      + +   + N FV   +      A  LA   G
Sbjct: 280 ---------IIKVDAKERFLSKLVGVSDPEQKRKIIGNEFVYVFDD----EATKLAGEEG 326

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           ++ +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 327 VSFLAQGTLYTDVIESGTETAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRALGTEL 386

Query: 188 GGQDLV 193
           G  D +
Sbjct: 387 GMPDAI 392


>gi|134045741|ref|YP_001097227.1| GMP synthase subunit B [Methanococcus maripaludis C5]
 gi|132663366|gb|ABO35012.1| GMP synthase (glutamine-hydrolyzing) [Methanococcus maripaludis C5]
          Length = 310

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 55/188 (29%), Gaps = 26/188 (13%)

Query: 7   KAPSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                ++  SGG DS+           D++  +  D G   K E E    + K+ + L  
Sbjct: 20  NNRKTIIALSGGVDSAVAAVLTDKAIGDKLLAVYVDTGLMRKNESEEIWKIFKEQMGL-- 77

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                + E   + L  L  +      + +                   +F+     +A  
Sbjct: 78  --NLKIVEAKDIFLKELEGVIDPEEKRKIIG----------------RLFIEVFEKVAEE 119

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G   +V G              +        I L     + V  PL  L K E   LA 
Sbjct: 120 QGEEVLVQGTIA-----PDWIESEGQIKTHHNIALPGGMVLDVVEPLRELYKDEVRLLAV 174

Query: 186 DIGGQDLV 193
            +G  D +
Sbjct: 175 ALGLPDQI 182


>gi|159185316|ref|NP_355604.2| argininosuccinate synthase [Agrobacterium tumefaciens str. C58]
 gi|24211505|sp|Q8UC31|ASSY_AGRT5 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|159140573|gb|AAK88389.2| argininosuccinate synthase [Agrobacterium tumefaciens str. C58]
          Length = 407

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 31/80 (38%), Gaps = 6/80 (7%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV- 61
          + K     +L +SGG D+S  L W        V T + D GQ  ++E        + +  
Sbjct: 3  LPKDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEP--ARKKAEMLGI 60

Query: 62 --ELMPKWKDSLGEDHILPL 79
              +   ++    D + P+
Sbjct: 61 KEIFVEDVREEFVRDFVFPM 80


>gi|157162656|ref|YP_001459974.1| argininosuccinate synthase [Escherichia coli HS]
 gi|170018577|ref|YP_001723531.1| argininosuccinate synthase [Escherichia coli ATCC 8739]
 gi|194438838|ref|ZP_03070924.1| argininosuccinate synthase [Escherichia coli 101-1]
 gi|253771993|ref|YP_003034824.1| argininosuccinate synthase [Escherichia coli 'BL21-Gold(DE3)pLysS
          AG']
 gi|254163115|ref|YP_003046223.1| argininosuccinate synthase [Escherichia coli B str. REL606]
 gi|300929862|ref|ZP_07145308.1| argininosuccinate synthase [Escherichia coli MS 187-1]
 gi|312972556|ref|ZP_07786729.1| argininosuccinate synthase [Escherichia coli 1827-70]
 gi|166989390|sp|A8A4Y7|ASSY_ECOHS RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|189046389|sp|B1IQV0|ASSY_ECOLC RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|157068336|gb|ABV07591.1| argininosuccinate synthase [Escherichia coli HS]
 gi|169753505|gb|ACA76204.1| Argininosuccinate synthase [Escherichia coli ATCC 8739]
 gi|194422310|gb|EDX38311.1| argininosuccinate synthase [Escherichia coli 101-1]
 gi|242378716|emb|CAQ33506.1| argininosuccinate synthase [Escherichia coli BL21(DE3)]
 gi|253323037|gb|ACT27639.1| argininosuccinate synthase [Escherichia coli 'BL21-Gold(DE3)pLysS
          AG']
 gi|253975016|gb|ACT40687.1| argininosuccinate synthase [Escherichia coli B str. REL606]
 gi|253979172|gb|ACT44842.1| argininosuccinate synthase [Escherichia coli BL21(DE3)]
 gi|300462224|gb|EFK25717.1| argininosuccinate synthase [Escherichia coli MS 187-1]
 gi|310332498|gb|EFP99711.1| argininosuccinate synthase [Escherichia coli 1827-70]
 gi|323941727|gb|EGB37906.1| argininosuccinate synthase [Escherichia coli E482]
 gi|323970264|gb|EGB65535.1| argininosuccinate synthase [Escherichia coli TA007]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 72


>gi|309774715|ref|ZP_07669739.1| GMP synthase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308917615|gb|EFP63331.1| GMP synthase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 513

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 54/185 (29%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS   +       D++  +  D+G   K E      V +     M  
Sbjct: 215 TDKVLLGLSGGVDSSVVAALLHKAIGDQLICMFIDHGLLRKGE---AESVMETFGREMNI 271

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +          L  ++  S  +     I +  +       + +             
Sbjct: 272 NLVKIDA----KERFLSKLAGVSDPEKKRKIIGNEFVYTFDEEVKKLTS---------GE 318

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  +  G   TD          TI++      L  +    +  PL  L K E   L  +
Sbjct: 319 DIKWLAQGTLYTDVIESGTKTAQTIKSHHNVGGLPEDMQFQLIEPLNTLFKDEVRALGTE 378

Query: 187 IGGQD 191
           +G  D
Sbjct: 379 LGLPD 383


>gi|227502742|ref|ZP_03932791.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Corynebacterium accolens ATCC 49725]
 gi|227076472|gb|EEI14435.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Corynebacterium accolens ATCC 49725]
          Length = 511

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 53/185 (28%), Gaps = 12/185 (6%)

Query: 10  SALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+   +       DR+  +  D+G     E E          ++   + 
Sbjct: 209 RAICALSGGVDSAVAAALVQGAIGDRLTCVFVDHGLLRAGERE----------QVETDFV 258

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            S G   +        +   +   +   K +           R  +  V     A     
Sbjct: 259 ASTGAKLVTADERSAFLQKLAGVSDPEEKRKAIGAEFIRSFERA-VAGVLDDAPAGSTVD 317

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +    +  PL  L K E   + +++G
Sbjct: 318 YLVQGTLYPDVVESGGGDGTANIKSHHNVGGLPDDVEFELVEPLRLLFKDEVRAVGRELG 377

Query: 189 GQDLV 193
             + +
Sbjct: 378 LPEEI 382


>gi|51038614|ref|YP_063260.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Borrelia garinii PBi]
 gi|81391517|sp|Q6ASN4|GUAA_BORGA RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|51036287|gb|AAT93750.1| GMP synthase [Borrelia garinii PBi]
          Length = 528

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 58/184 (31%), Gaps = 23/184 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDR-VETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +L  SGG DS  C           +  +  + G   K E        KKI+EL  +
Sbjct: 232 SKKVILGLSGGTDSLVCALLIKKAIKENLICVFVNTGLLRKNED-------KKILELKHQ 284

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  +      +      +   + L      + +   +   FV     I L          
Sbjct: 285 YDLN------IKYIDASEKFLNYLKNISDPEEKRKIIGKEFVNVFEKITL-------EDQ 331

Query: 127 GITNIVIGVCETDY--SGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            I  +  G   +D   S   +     I++      L  +  + +  PL    K E  ++ 
Sbjct: 332 NIEYLAQGTIYSDVIESKSKNNASSKIKSHHNVGGLPDKMRLKLLEPLNEFFKDEIIQIG 391

Query: 185 QDIG 188
            ++G
Sbjct: 392 INLG 395


>gi|330718517|ref|ZP_08313117.1| tRNA(Ile)-lysidine synthetase, MesJ [Leuconostoc fallax KCTC
          3537]
          Length = 442

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 28/74 (37%), Gaps = 4/74 (5%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETL--SFDYGQRNKVELECR--LCVRKKI 60
          ++     ++  SGG DS   L   +    +VE +    +Y  R + + +      + KK 
Sbjct: 12 LQLPDKVIVAVSGGVDSVVLLDALIKTQPQVEFIVAHVNYHLRPQSDNDAHFVAEIAKKY 71

Query: 61 VELMPKWKDSLGED 74
            ++ K      + 
Sbjct: 72 HVVLRKVDWQGIDQ 85


>gi|251809816|ref|ZP_04824289.1| possible tRNA(Ile)-lysidine synthase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|251806684|gb|EES59341.1| possible tRNA(Ile)-lysidine synthase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|329733025|gb|EGG69364.1| tRNA(Ile)-lysidine synthetase [Staphylococcus epidermidis VCU028]
          Length = 432

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/182 (12%), Positives = 52/182 (28%), Gaps = 27/182 (14%)

Query: 8   APSA--LLLFSGGQDSSTCLSWALDR----FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           +  A  ++  S G DS + L   L+     + ++  +  ++G R +   E      ++  
Sbjct: 9   SKKAHIVVAVSTGIDSMSLLYSLLNDYQHTYRKLTCVHVNHGLREQSYEEEA--FLREYC 66

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                          L L+ +    +S   +    + +     +     R  + L     
Sbjct: 67  HQHHI----DIYIKRLDLSDIVADGNSIQQEARQRRYE--WFGDIIAQLRADVLLTAH-- 118

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
                          + +   Y      + R           +   V+ P++ LKK E  
Sbjct: 119 -----------HLDDQLETIIYRLFTGRSTRNSLGMTYESYFNQYKVYRPMLNLKKTEIL 167

Query: 182 KL 183
             
Sbjct: 168 AY 169


>gi|221310688|ref|ZP_03592535.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus subtilis subsp. subtilis str. 168]
 gi|221315011|ref|ZP_03596816.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus subtilis subsp. subtilis str. NCIB 3610]
 gi|221319932|ref|ZP_03601226.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus subtilis subsp. subtilis str. JH642]
 gi|221324213|ref|ZP_03605507.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacillus subtilis subsp. subtilis str. SMY]
 gi|255767628|ref|NP_390627.3| tRNA-specific 2-thiouridylase MnmA [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|254763446|sp|O35020|MNMA_BACSU RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|225185256|emb|CAB14691.3| tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Bacillus subtilis subsp. subtilis str. 168]
          Length = 371

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/156 (11%), Positives = 37/156 (23%), Gaps = 7/156 (4%)

Query: 4   IIKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           + K+      ++  SGG DSS       ++   V  +             C     +   
Sbjct: 1   MEKRPEDTRVVVGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGFC--TATEDYE 58

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +++          + +         +  + +    + +    PN  V     I       
Sbjct: 59  DVIRVCNQIGIPYYAVN---FEKQYYEKVFQYFLDEYKAGRTPNPDVLCNKEIKFKAFLE 115

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA 157
            A  LG   +  G            R          
Sbjct: 116 HALSLGADYLATGHYARVDRSGGKVRMLRGIDENKD 151


>gi|163749538|ref|ZP_02156785.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Shewanella benthica KT99]
 gi|161330648|gb|EDQ01585.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Shewanella benthica KT99]
          Length = 525

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 50/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS           D++  +  D G     E                +  D
Sbjct: 230 VILGLSGGVDSSVVAMLLHRAIGDKLTCVFVDNGLLRLNE--------------AEQVMD 275

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+   L +  +   +            +        V              A  L   
Sbjct: 276 MFGDHFGLKIVHVTAENRFLDAMKGEADPEAKRKIIGRVFVEIFDEESKKCANAKWLAQG 335

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S         I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 336 TIYPDVIESAGSATGKAHV--IKSHHNVGGLPDDMELGLVEPLRELFKDEVRKIGLELGL 393

Query: 190 Q 190
            
Sbjct: 394 P 394


>gi|160946390|ref|ZP_02093599.1| hypothetical protein PEPMIC_00350 [Parvimonas micra ATCC 33270]
 gi|158447506|gb|EDP24501.1| hypothetical protein PEPMIC_00350 [Parvimonas micra ATCC 33270]
          Length = 350

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/152 (13%), Positives = 42/152 (27%), Gaps = 4/152 (2%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQR-NKVELECRLCVRKKIVELMPKWKDSLGE 73
            SGG DS       L     V  ++ +   + +  + E   C    +++     +    +
Sbjct: 1   MSGGVDSCVACHLLLKEGYEVIGVTMNLVPKGHLYDEEKGCCSLSSVMDAKIVAEAMGVK 60

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
            + +      +     + +N   +      PN  V     I           L    I  
Sbjct: 61  HYTM---SFREEFDRKVIENFVREYSLGYTPNPCVACNKYIKFNSFVDKIRPLKADFIST 117

Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESH 165
           G            R+   RA ++  +     +
Sbjct: 118 GHYAKVEFDKNYNRYLLKRAKDSKKDQTYFLY 149


>gi|118475434|ref|YP_892513.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase) [Campylobacter
           fetus subsp. fetus 82-40]
 gi|118414660|gb|ABK83080.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase) [Campylobacter
           fetus subsp. fetus 82-40]
          Length = 336

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 53/176 (30%), Gaps = 15/176 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               LL FS G DS+       ++    +    +Y  R + + E              + 
Sbjct: 11  HKKCLLAFSYGTDSTALFHILNEKNIEFDCAFINYKTRVQSDEEE---------VSAKEL 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                ++  + +A L   + S+  K                   + + L      A++L 
Sbjct: 62  CLKFNKNIYIKIAPLNLENGSNFEKKARDIRHKFFDEICIKFNYDTLIL------AHQLN 115

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
                + +  +  SG            + A    ++  ++V  PL+ + + E    
Sbjct: 116 DCLEWLFMQLSKGSGTVQLCGLEPTNTKIAEFENIKKQISVIRPLINVSRNEIISY 171


>gi|160880070|ref|YP_001559038.1| argininosuccinate synthase [Clostridium phytofermentans ISDg]
 gi|187470628|sp|A9KHL4|ASSY_CLOPH RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|160428736|gb|ABX42299.1| Argininosuccinate synthase [Clostridium phytofermentans ISDg]
          Length = 407

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 62/212 (29%), Gaps = 23/212 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L +SGG D++  + W  + +   V     D GQ N+++         K+     
Sbjct: 1   MKEKVILAYSGGLDTTAIIPWLKENYDYDVVCCCIDVGQGNELDGLEERA---KLSGATK 57

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            + + + ++ +             +    A  + +N         R  +       +A +
Sbjct: 58  LYIEHVTDEFV---------DEYVMPCVKAGAVYENKYLLGTSMAR-PVIAKKLVEVAIK 107

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                I  G                  A +  I      +           + +  +  +
Sbjct: 108 ENAVAICHGATGKGNDQVRFELGIKALAPDLKIIAPWRCN----NTWKMQSREDEIEYCK 163

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
             G    ++L  + SH+ Y   R+  +    G
Sbjct: 164 AHG----IDLPFDASHS-YSRDRNLWHISHEG 190


>gi|52425307|ref|YP_088444.1| sulfate adenylyltransferase subunit 2 [Mannheimia
           succiniciproducens MBEL55E]
 gi|52307359|gb|AAU37859.1| CysH protein [Mannheimia succiniciproducens MBEL55E]
          Length = 308

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 48/182 (26%), Gaps = 18/182 (9%)

Query: 13  LLFSGGQDSSTCLSWALD----RFDRVE----TLSFDYGQRNKVELECRLCVRKKIVELM 64
           LLFSGG+DS   L+ A          +      +  D G      ++ R    KK+    
Sbjct: 35  LLFSGGKDSVVLLALARKAFQLEGRDLVLPFPLVHIDTGHNYPEVIQFRDEQVKKLNA-- 92

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L   H+      G +     T +         L      G + +          
Sbjct: 93  -----RLVVGHVEDSIAKGTVVLRKETDSRNAAQAVTLLETIEANGFDALMGGARRDEEK 147

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                 I     E         R +        ++ G    V    P+    + + W+  
Sbjct: 148 ARAKERIFSFRDEFGQWDPKAQRPELWSLYNGKLHKGENMRV---FPISNWTELDIWQYI 204

Query: 185 QD 186
           + 
Sbjct: 205 ER 206


>gi|68536810|ref|YP_251515.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Corynebacterium jeikeium K411]
 gi|91206802|sp|Q4JTG0|GUAA_CORJK RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|68264409|emb|CAI37897.1| GMP synthase [Corynebacterium jeikeium K411]
          Length = 529

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 50/193 (25%), Gaps = 12/193 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
            + I     A+   SGG DS+   +       DR+  +  D+G     E E         
Sbjct: 219 REQIGDEGRAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGEREQVEK----- 273

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                    +  +   +          + +T+  A +                  L    
Sbjct: 274 ----DFVAATGAKLVTVDEREAFLQKLAGVTEPEAKRKAIGAEFIRSFERAVAGVLAD-- 327

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
                     +   +               I++      L  +    +  PL  L K E 
Sbjct: 328 APEGSSVDFLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPDDVEFELVEPLRLLFKDEV 387

Query: 181 WKLAQDIGGQDLV 193
             + +++G  + +
Sbjct: 388 RAVGRELGLPEEI 400


>gi|114567299|ref|YP_754453.1| GMP synthase [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
 gi|122317748|sp|Q0AW22|GUAA_SYNWW RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|114338234|gb|ABI69082.1| GMP synthase (glutamine-hydrolyzing) [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
          Length = 510

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 50/184 (27%), Gaps = 20/184 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS   +       +++  +  D G                   L+ K
Sbjct: 215 KKRVLCALSGGVDSSVAATLVHQAVGEQLVCVFVDNG-------------------LLRK 255

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            + S   D       +  +   +  + +A                     +F    A   
Sbjct: 256 GEASQVIDTFAKEMKMNLVFVDARERFLAKLAGITEPERKRKIIGEEFIRIFEEEKAKLG 315

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  +V G    D          TI++      L  +    +  PL  L K E   + + 
Sbjct: 316 EIDYLVQGTIYPDIVESGTSTAQTIKSHHNVGGLPEDMDFQLIEPLRLLFKDEVRLVGEK 375

Query: 187 IGGQ 190
           +G  
Sbjct: 376 LGIP 379


>gi|318042099|ref|ZP_07974055.1| tRNA-specific 2-thiouridylase MnmA [Synechococcus sp. CB0101]
          Length = 394

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 52/189 (27%), Gaps = 19/189 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +  SGG DSS   +  ++   +VE L+        +      C  + +V+     + 
Sbjct: 36  RVAVGLSGGVDSSLTAALLVEAGWQVEGLTL------WLMSGKGACCAEGLVDAAGICEQ 89

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA-YRLGI 128
              E H++      +     +   +     D   P         +        A    GI
Sbjct: 90  LGVEHHVVD---FREHFKEQIVDFLVQGYGDGITPLPCSRCNREVKFGPMLHWAQEERGI 146

Query: 129 TNIVIGVCETDYSGYPDCRHDTI---------RAIETAINLGMESHVTVHTPLMWLKKYE 179
           + I  G       G                         +L  E+   +  PL  L K +
Sbjct: 147 SRIATGHYARVCHGEQSDNGRHQLLRGLDRQKDQSYFLYDLPQEALGRLVFPLGELTKAD 206

Query: 180 TWKLAQDIG 188
           T   A   G
Sbjct: 207 TRVEAARHG 215


>gi|306822640|ref|ZP_07456018.1| argininosuccinate synthase [Bifidobacterium dentium ATCC 27679]
 gi|309800992|ref|ZP_07695124.1| argininosuccinate synthase [Bifidobacterium dentium JCVIHMP022]
 gi|304554185|gb|EFM42094.1| argininosuccinate synthase [Bifidobacterium dentium ATCC 27679]
 gi|308222528|gb|EFO78808.1| argininosuccinate synthase [Bifidobacterium dentium JCVIHMP022]
          Length = 418

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 2  NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCV 56
           + +      +L +SGG D+S  +S+  +R    V  +S D GQ  +     +   
Sbjct: 4  RETMSDQNRLVLAYSGGLDTSVAISYLKERTGKDVVAVSLDVGQGGESLETIKQRA 59


>gi|222153770|ref|YP_002562947.1| argininosuccinate synthase [Streptococcus uberis 0140J]
 gi|254807533|sp|B9DVV9|ASSY_STRU0 RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|222114583|emb|CAR43561.1| argininosuccinate synthase [Streptococcus uberis 0140J]
          Length = 399

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 59/221 (26%), Gaps = 39/221 (17%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K    +L +SGG D+S  ++W    F  V  +  D G     +L+       KI    
Sbjct: 1   MNKN-KIVLAYSGGLDTSVAIAWLKKDF-DVIAVCMDVG--EGKDLQFIHEKALKIGA-- 54

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL-A 123
                   E +++ +    +    +                  V   +   +       A
Sbjct: 55  -------IESYVIDV---KEEFAEAFVLPALQAHAFYEQKYPLVSALSRPLISKKLVDIA 104

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYETW 181
           +  G T I           +        +         ++  + V  P+      + E  
Sbjct: 105 HECGATYI----------AHGCTGKGNDQVRFEIAIAALDPTIEVIAPVRDWHWSREEEI 154

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG--CNS 220
             A++ G     +L               +  WG    C  
Sbjct: 155 AFAKENGVPIPADLD--------NPYSVDQNLWGRANECGV 187


>gi|171742782|ref|ZP_02918589.1| hypothetical protein BIFDEN_01896 [Bifidobacterium dentium ATCC
          27678]
 gi|171278396|gb|EDT46057.1| hypothetical protein BIFDEN_01896 [Bifidobacterium dentium ATCC
          27678]
          Length = 418

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 2  NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCV 56
           + +      +L +SGG D+S  +S+  +R    V  +S D GQ  +     +   
Sbjct: 4  RETMSDQNRLVLAYSGGLDTSVAISYLKERTGKDVVAVSLDVGQGGESLETIKQRA 59


>gi|154488644|ref|ZP_02029493.1| hypothetical protein BIFADO_01951 [Bifidobacterium adolescentis
          L2-32]
 gi|212715749|ref|ZP_03323877.1| hypothetical protein BIFCAT_00649 [Bifidobacterium catenulatum
          DSM 16992]
 gi|225352198|ref|ZP_03743221.1| hypothetical protein BIFPSEUDO_03814 [Bifidobacterium
          pseudocatenulatum DSM 20438]
 gi|154082781|gb|EDN81826.1| hypothetical protein BIFADO_01951 [Bifidobacterium adolescentis
          L2-32]
 gi|212661116|gb|EEB21691.1| hypothetical protein BIFCAT_00649 [Bifidobacterium catenulatum
          DSM 16992]
 gi|225157445|gb|EEG70784.1| hypothetical protein BIFPSEUDO_03814 [Bifidobacterium
          pseudocatenulatum DSM 20438]
          Length = 418

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 2  NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCV 56
           + +      +L +SGG D+S  +S+  +R    V  +S D GQ  +     +   
Sbjct: 4  RETMSDQNRLVLAYSGGLDTSVAISYLKERTGKDVVAVSLDVGQGGESLETIKQRA 59


>gi|119025937|ref|YP_909782.1| argininosuccinate synthase [Bifidobacterium adolescentis ATCC
          15703]
 gi|171473028|sp|A1A1W7|ASSY_BIFAA RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|118765521|dbj|BAF39700.1| argininosuccinate synthase [Bifidobacterium adolescentis ATCC
          15703]
          Length = 418

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 2  NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCV 56
           + +      +L +SGG D+S  +S+  +R    V  +S D GQ  +     +   
Sbjct: 4  RETMSDQNRLVLAYSGGLDTSVAISYLKERTGKDVVAVSLDVGQGGESLETIKQRA 59


>gi|325919552|ref|ZP_08181566.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Xanthomonas gardneri ATCC 19865]
 gi|325549961|gb|EGD20801.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Xanthomonas gardneri ATCC 19865]
          Length = 378

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 33/135 (24%), Gaps = 6/135 (4%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            P  ++  SGG DSS        + + +  L       +          R+  V +    
Sbjct: 3   TPRIIVGVSGGVDSSVAAWRLAQQGESIAGLFMQNWADDGSGDCRAEDDRRDAVAVCGVL 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                           +   S + ++   +      PN  V     +        A  LG
Sbjct: 63  GIP------FHFRDFSNEYWSGVFEHFLAEYAAGRTPNPDVLCNREVKFKHFLDAAQALG 116

Query: 128 ITNIVIGVCETDYSG 142
              I  G        
Sbjct: 117 AERIATGHYARVAHS 131


>gi|289192120|ref|YP_003458061.1| Queuosine synthesis-like protein [Methanocaldococcus sp. FS406-22]
 gi|288938570|gb|ADC69325.1| Queuosine synthesis-like protein [Methanocaldococcus sp. FS406-22]
          Length = 260

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 2/70 (2%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-RNKVELECRLCVRKKIVEL 63
           I K PSA++ FSGG DSST    A   F  V+ +S            E    V KKI   
Sbjct: 59  IDKKPSAVVAFSGGVDSSTSTIIAKHIF-NVKAVSCYSKYIMTDEMKETAKNVAKKIGVD 117

Query: 64  MPKWKDSLGE 73
           +      L E
Sbjct: 118 LEFIDIDLEE 127


>gi|163867477|ref|YP_001608676.1| GMP synthase [Bartonella tribocorum CIP 105476]
 gi|161017123|emb|CAK00681.1| GMP synthase [Bartonella tribocorum CIP 105476]
          Length = 530

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 55/185 (29%), Gaps = 18/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS       +   D++  +  D+G   K E        ++++ L   
Sbjct: 233 KNRVICGLSGGVDSSVVAVLLHEAIGDQLTCILVDHGLMRKNE-------AQEVLTLFR- 284

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + + + L  +                +        +              A  L
Sbjct: 285 ------DHYNIELIHVNAADIFLNALEGETDPEKKRKTIGRLFIEVFEEETKKIGGAEFL 338

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+  +         I++      L  + ++ +  PL  L K E   L ++
Sbjct: 339 AQGTLYPDVIESVSAIGESVT---IKSHHNVGGLPEQMNMKLVEPLRELFKDEVRLLGRE 395

Query: 187 IGGQD 191
           +G  +
Sbjct: 396 LGLPE 400


>gi|28198213|ref|NP_778527.1| argininosuccinate synthase [Xylella fastidiosa Temecula1]
 gi|182680848|ref|YP_001829008.1| argininosuccinate synthase [Xylella fastidiosa M23]
 gi|30172778|sp|P59606|ASSY_XYLFT RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|28056283|gb|AAO28176.1| argininosuccinate synthase [Xylella fastidiosa Temecula1]
 gi|182630958|gb|ACB91734.1| Argininosuccinate synthase [Xylella fastidiosa M23]
 gi|307579315|gb|ADN63284.1| argininosuccinate synthase [Xylella fastidiosa subsp. fastidiosa
          GB514]
          Length = 401

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 26/58 (44%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
            + +L FSGG D+S C+ +  ++   V T+  D G  ++ E +       ++     
Sbjct: 3  NKNIVLAFSGGLDTSFCIPYLKEQGYAVHTVFADTGGVDEDERDFIEKRAAELGVASH 60


>gi|322615294|gb|EFY12215.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. 315996572]
 gi|322618347|gb|EFY15238.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. 495297-1]
 gi|322622848|gb|EFY19692.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. 495297-3]
 gi|322626830|gb|EFY23627.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. 495297-4]
 gi|322631399|gb|EFY28159.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. 515920-1]
 gi|322635334|gb|EFY32048.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. 515920-2]
 gi|322643469|gb|EFY40032.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. 531954]
 gi|322647095|gb|EFY43596.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. NC_MB110209-0054]
 gi|322648898|gb|EFY45343.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. OH_2009072675]
 gi|322655090|gb|EFY51401.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. CASC_09SCPH15965]
 gi|322657693|gb|EFY53961.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. 19N]
 gi|322664189|gb|EFY60387.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. 81038-01]
 gi|322667472|gb|EFY63634.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. MD_MDA09249507]
 gi|322674720|gb|EFY70812.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. 414877]
 gi|322675647|gb|EFY71720.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. 366867]
 gi|322682283|gb|EFY78306.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. 413180]
 gi|322684886|gb|EFY80884.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. 446600]
 gi|323191867|gb|EFZ77115.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. 609458-1]
 gi|323199026|gb|EFZ84123.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. 556150-1]
 gi|323204274|gb|EFZ89283.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. 609460]
 gi|323207621|gb|EFZ92568.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. 507440-20]
 gi|323211326|gb|EFZ96170.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. 556152]
 gi|323214732|gb|EFZ99481.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. MB101509-0077]
 gi|323221212|gb|EGA05638.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. MB102109-0047]
 gi|323224047|gb|EGA08340.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. MB110209-0055]
 gi|323230304|gb|EGA14423.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. MB111609-0052]
 gi|323233280|gb|EGA17374.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. 2009083312]
 gi|323239317|gb|EGA23367.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. 2009085258]
 gi|323242432|gb|EGA26458.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. 315731156]
 gi|323246942|gb|EGA30908.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. IA_2009159199]
 gi|323254125|gb|EGA37945.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. IA_2010008282]
 gi|323255242|gb|EGA39019.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. IA_2010008283]
 gi|323262705|gb|EGA46261.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. IA_2010008284]
 gi|323264015|gb|EGA47523.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. IA_2010008285]
 gi|323269401|gb|EGA52856.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Montevideo str. IA_2010008287]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLID 72


>gi|300726241|ref|ZP_07059694.1| argininosuccinate synthase (Citrulline--aspartateligase)
           [Prevotella bryantii B14]
 gi|299776438|gb|EFI72995.1| argininosuccinate synthase (Citrulline--aspartateligase)
           [Prevotella bryantii B14]
          Length = 400

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 52/191 (27%), Gaps = 5/191 (2%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++ FSGG D+S  +         V     + G  N+ +L+       K+  +    
Sbjct: 3   KKKVVVAFSGGLDTSYTVMKLTQDGWDVYAACANTGGFNEEQLKVNEENAYKLGAVKYVT 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D   E +   L  +    +        + +    +       R    +   A      G
Sbjct: 63  LDVTQEYYEKSLKYM-IYGNVMRNNCYPISVSSERIFQAIAIARYANEIQADAIAHGSTG 121

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK----YETWKL 183
             N  I    T     P     T+   +         ++  H       K    Y     
Sbjct: 122 AGNDQIRFDMTFLVMAPGVEIITLTRDQALSRKEEVDYLNDHGFYADFTKLKYSYNVGIW 181

Query: 184 AQDIGGQDLVN 194
              I G ++++
Sbjct: 182 GTSICGGEILD 192


>gi|296333160|ref|ZP_06875613.1| tRNA-specific 2-thiouridylase MnmA [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305675334|ref|YP_003867006.1| tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296149358|gb|EFG90254.1| tRNA-specific 2-thiouridylase MnmA [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305413578|gb|ADM38697.1| tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase
           [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 371

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/156 (11%), Positives = 37/156 (23%), Gaps = 7/156 (4%)

Query: 4   IIKKAP--SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           + K+      ++  SGG DSS       ++   V  +             C     +   
Sbjct: 1   MEKRPEDTRVVVGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGFC--TATEDYE 58

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +++          + +         +  + +    + +    PN  V     I       
Sbjct: 59  DVIRVCNQIGIPYYAVN---FEKQYYEKVFQYFLDEYKAGRTPNPDVLCNKEIKFKAFLE 115

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA 157
            A  LG   +  G            R          
Sbjct: 116 HALSLGADYLATGHYARVDRSGGKVRMLRGIDENKD 151


>gi|302558906|ref|ZP_07311248.1| GMP synthase domain-containing protein [Streptomyces griseoflavus
           Tu4000]
 gi|302476524|gb|EFL39617.1| GMP synthase domain-containing protein [Streptomyces griseoflavus
           Tu4000]
          Length = 260

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 15/36 (41%), Gaps = 1/36 (2%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
             A+   SGG DS+   +        ++  +  D+G
Sbjct: 225 KRAICGLSGGVDSAVAAALVQKAIGSQLTCVYVDHG 260


>gi|227872194|ref|ZP_03990561.1| GMP synthase (glutamine-hydrolyzing) [Oribacterium sinus F0268]
 gi|227841977|gb|EEJ52240.1| GMP synthase (glutamine-hydrolyzing) [Oribacterium sinus F0268]
          Length = 513

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 57/188 (30%), Gaps = 19/188 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVEL-MP 65
           +   LL  SGG DSS            ++  +  D+G   K E +    +  +  +  + 
Sbjct: 215 SGKVLLALSGGVDSSVAAGLLSRAIGKQLYCVFVDHGLLRKNEGDQVEEIFGEKGDFELN 274

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             + + GE++   L         +  ++   K +        +  R    +     LA  
Sbjct: 275 FVRVNAGEEYFEKL---------AGVEDPEKKRKIIGEQFIRIFEREANKIGTVDFLAQG 325

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
               ++V                  +    +           +  PL  L K E  K+  
Sbjct: 326 TIYADVVESGLGKGAVIKSHHNVGGLPKNISFK--------EIVEPLRLLFKDEVRKVGL 377

Query: 186 DIGGQDLV 193
           ++G  + +
Sbjct: 378 ELGLPEHL 385


>gi|298345148|ref|YP_003717835.1| argininosuccinate synthase [Mobiluncus curtisii ATCC 43063]
 gi|304390735|ref|ZP_07372687.1| argininosuccinate synthase [Mobiluncus curtisii subsp. curtisii
          ATCC 35241]
 gi|298235209|gb|ADI66341.1| argininosuccinate synthase [Mobiluncus curtisii ATCC 43063]
 gi|304325618|gb|EFL92864.1| argininosuccinate synthase [Mobiluncus curtisii subsp. curtisii
          ATCC 35241]
          Length = 410

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
               +L +SGG D+S  + W  D+       +S D GQ  +     R     
Sbjct: 1  MTERVVLAYSGGLDTSVAIGWMKDKLGVDTIAVSVDVGQGGEDMDVIRQRALD 53


>gi|224585087|ref|YP_002638886.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Paratyphi C strain RKS4594]
 gi|224469615|gb|ACN47445.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Paratyphi C strain RKS4594]
          Length = 469

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 38 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLID 94


>gi|205354193|ref|YP_002227994.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Gallinarum str. 287/91]
 gi|205273974|emb|CAR38979.1| argininosuccinate synthetase [Salmonella enterica subsp. enterica
          serovar Gallinarum str. 287/91]
 gi|326629314|gb|EGE35657.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Gallinarum str. 9]
          Length = 469

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 38 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLID 94


>gi|182679806|ref|YP_001833952.1| GMP synthase, large subunit [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|182635689|gb|ACB96463.1| GMP synthase, large subunit [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 533

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 56/183 (30%), Gaps = 12/183 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DS+       +   DR+  +  D+G     E        ++IV L     
Sbjct: 232 RVLCGLSGGVDSAVAALLIHEAIGDRLTCVFVDHGLLRHGE-------AEEIVSLFR--G 282

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                        L   + + ++     +     L                  +   LG 
Sbjct: 283 HYNIPLIHAQAQDLFLDALAGVSDPEEKRRIIGRLFIETFEAEAKTIASDGKGVPEFLGQ 342

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+    +      TI++      L    ++ +  PL  L K E  +L +++G
Sbjct: 343 GTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRELGRELG 400

Query: 189 GQD 191
             +
Sbjct: 401 LPE 403


>gi|200386565|ref|ZP_03213177.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Virchow str. SL491]
 gi|199603663|gb|EDZ02208.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Virchow str. SL491]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLID 72


>gi|168463488|ref|ZP_02697405.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Newport str. SL317]
 gi|195633379|gb|EDX51793.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Newport str. SL317]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLID 72


>gi|168262700|ref|ZP_02684673.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Hadar str. RI_05P066]
 gi|205348320|gb|EDZ34951.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Hadar str. RI_05P066]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLID 72


>gi|194442642|ref|YP_002042547.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Newport str. SL254]
 gi|226729205|sp|B4T702|ASSY_SALNS RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|194401305|gb|ACF61527.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Newport str. SL254]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLID 72


>gi|168243123|ref|ZP_02668055.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Heidelberg str. SL486]
 gi|194451635|ref|YP_002047318.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Heidelberg str. SL476]
 gi|226729204|sp|B4TJ09|ASSY_SALHS RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|194409939|gb|ACF70158.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Heidelberg str. SL476]
 gi|205337926|gb|EDZ24690.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Heidelberg str. SL486]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLID 72


>gi|204928051|ref|ZP_03219251.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Javiana str. GA_MM04042433]
 gi|204322373|gb|EDZ07570.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Javiana str. GA_MM04042433]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLID 72


>gi|197248069|ref|YP_002148215.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Agona str. SL483]
 gi|207858539|ref|YP_002245190.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Enteritidis str. P125109]
 gi|238910084|ref|ZP_04653921.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Tennessee str. CDC07-0191]
 gi|226729201|sp|B5F6U1|ASSY_SALA4 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|226729203|sp|B5QZW1|ASSY_SALEP RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|197211772|gb|ACH49169.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Agona str. SL483]
 gi|206710342|emb|CAR34700.1| argininosuccinate synthetase [Salmonella enterica subsp. enterica
          serovar Enteritidis str. P125109]
 gi|326625040|gb|EGE31385.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Dublin str. 3246]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLID 72


>gi|198242639|ref|YP_002217262.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Dublin str. CT_02021853]
 gi|226729202|sp|B5FI16|ASSY_SALDC RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|197937155|gb|ACH74488.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Dublin str. CT_02021853]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLID 72


>gi|197265891|ref|ZP_03165965.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Saintpaul str. SARA23]
 gi|197244146|gb|EDY26766.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Saintpaul str. SARA23]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLID 72


>gi|161486780|ref|NP_806885.2| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Typhi str. Ty2]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLID 72


>gi|161616295|ref|YP_001590260.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Paratyphi B str. SPB7]
 gi|167552063|ref|ZP_02345816.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Saintpaul str. SARA29]
 gi|189046403|sp|A9N735|ASSY_SALPB RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|161365659|gb|ABX69427.1| hypothetical protein SPAB_04102 [Salmonella enterica subsp.
          enterica serovar Paratyphi B str. SPB7]
 gi|205323216|gb|EDZ11055.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Saintpaul str. SARA29]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLID 72


>gi|157148743|ref|YP_001456062.1| argininosuccinate synthase [Citrobacter koseri ATCC BAA-895]
 gi|166219961|sp|A8AQ63|ASSY_CITK8 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|157085948|gb|ABV15626.1| hypothetical protein CKO_04574 [Citrobacter koseri ATCC BAA-895]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLID 72


>gi|16421848|gb|AAL22161.1| argininosuccinate synthetase [Salmonella enterica subsp. enterica
          serovar Typhimurium str. LT2]
 gi|261248455|emb|CBG26292.1| argininosuccinate synthetase [Salmonella enterica subsp. enterica
          serovar Typhimurium str. D23580]
 gi|323131649|gb|ADX19079.1| argininosuccinate synthetase [Salmonella enterica subsp. enterica
          serovar Typhimurium str. 4/74]
 gi|332990147|gb|AEF09130.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Typhimurium str. UK-1]
          Length = 469

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 38 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLID 94


>gi|82778485|ref|YP_404834.1| argininosuccinate synthase [Shigella dysenteriae Sd197]
 gi|309785498|ref|ZP_07680129.1| argininosuccinate synthase [Shigella dysenteriae 1617]
 gi|123561525|sp|Q32BG2|ASSY_SHIDS RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|81242633|gb|ABB63343.1| argininosuccinate synthetase [Shigella dysenteriae Sd197]
 gi|308926618|gb|EFP72094.1| argininosuccinate synthase [Shigella dysenteriae 1617]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 72


>gi|29139177|gb|AAO70745.1| argininosuccinate synthetase [Salmonella enterica subsp. enterica
          serovar Typhi str. Ty2]
          Length = 469

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 38 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLID 94


>gi|161501915|ref|NP_457671.2| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Typhi str. CT18]
 gi|161936210|ref|YP_152296.2| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Paratyphi A str. ATCC 9150]
 gi|162139539|ref|YP_218218.2| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Choleraesuis str. SC-B67]
 gi|168819642|ref|ZP_02831642.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Weltevreden str. HI_N05-537]
 gi|213052984|ref|ZP_03345862.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Typhi str. E00-7866]
 gi|213416909|ref|ZP_03350053.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Typhi str. E01-6750]
 gi|213425430|ref|ZP_03358180.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Typhi str. E02-1180]
 gi|213622802|ref|ZP_03375585.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Typhi str. E98-2068]
 gi|213645861|ref|ZP_03375914.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Typhi str. J185]
 gi|289825804|ref|ZP_06544972.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Typhi str. E98-3139]
 gi|24211511|sp|Q8Z3H5|ASSY_SALTI RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|205343473|gb|EDZ30237.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Weltevreden str. HI_N05-537]
 gi|320087736|emb|CBY97500.1| Argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Weltevreden str. 2007-60-3289-1]
 gi|322716287|gb|EFZ07858.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Choleraesuis str. A50]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLID 72


>gi|197364151|ref|YP_002143788.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Paratyphi A str. AKU_12601]
 gi|16504357|emb|CAD07809.1| argininosuccinate synthetase [Salmonella enterica subsp. enterica
          serovar Typhi]
 gi|56129478|gb|AAV78984.1| argininosuccinate synthetase [Salmonella enterica subsp. enterica
          serovar Paratyphi A str. ATCC 9150]
 gi|62129434|gb|AAX67137.1| argininosuccinate synthetase [Salmonella enterica subsp. enterica
          serovar Choleraesuis str. SC-B67]
 gi|197095628|emb|CAR61196.1| argininosuccinate synthetase [Salmonella enterica subsp. enterica
          serovar Paratyphi A str. AKU_12601]
          Length = 469

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 38 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLID 94


>gi|39546365|ref|NP_462202.2| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Typhimurium str. LT2]
 gi|167990146|ref|ZP_02571246.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar 4,[5],12:i:- str. CVM23701]
 gi|168231898|ref|ZP_02656956.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Kentucky str. CDC 191]
 gi|168237990|ref|ZP_02663048.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Schwarzengrund str. SL480]
 gi|194468808|ref|ZP_03074792.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Kentucky str. CVM29188]
 gi|194737645|ref|YP_002116239.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Schwarzengrund str. CVM19633]
 gi|24211516|sp|Q8ZLT0|ASSY_SALTY RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|226729206|sp|B4TWE1|ASSY_SALSV RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|194455172|gb|EDX44011.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Kentucky str. CVM29188]
 gi|194713147|gb|ACF92368.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Schwarzengrund str. CVM19633]
 gi|197289124|gb|EDY28493.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Schwarzengrund str. SL480]
 gi|205331249|gb|EDZ18013.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar 4,[5],12:i:- str. CVM23701]
 gi|205333771|gb|EDZ20535.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Kentucky str. CDC 191]
 gi|267995486|gb|ACY90371.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Typhimurium str. 14028S]
 gi|301159839|emb|CBW19358.1| argininosuccinate synthetase [Salmonella enterica subsp. enterica
          serovar Typhimurium str. SL1344]
 gi|312914315|dbj|BAJ38289.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Typhimurium str. T000240]
 gi|321225973|gb|EFX51027.1| Argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Typhimurium str. TN061786]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLID 72


>gi|189499321|ref|YP_001958791.1| GMP synthase [Chlorobium phaeobacteroides BS1]
 gi|226738417|sp|B3ELI1|GUAA_CHLPB RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|189494762|gb|ACE03310.1| GMP synthase, large subunit [Chlorobium phaeobacteroides BS1]
          Length = 514

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 57/185 (30%), Gaps = 22/185 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             + +   SGG DS+            ++  +  D G   K E +  + + K +      
Sbjct: 221 KNTVICGISGGVDSTVAAVLVSKAIGKQLHCVFVDNGLLRKHEGDKVMKILKPLG----- 275

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +L +   + L  L  I+     + +               GR  I +        + 
Sbjct: 276 LSVNLVDAEEIFLKRLKSIASPEKKRKI--------------IGRTFIHIFEEQIHEEKF 321

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +   +        S       +TI++      L     + +  PL  L K E   + ++
Sbjct: 322 LVQGTLYPDVIESVSVK--GPSETIKSHHNVGGLPKRMKLKLIEPLRELFKDEVRAVGRE 379

Query: 187 IGGQD 191
           +G  +
Sbjct: 380 LGIDE 384


>gi|170718380|ref|YP_001783604.1| argininosuccinate synthase [Haemophilus somnus 2336]
 gi|189046391|sp|B0UW58|ASSY_HAES2 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|168826509|gb|ACA31880.1| Argininosuccinate synthase [Haemophilus somnus 2336]
          Length = 444

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 17 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYNAIPRKAMEYGAEKARLID 73


>gi|113461505|ref|YP_719574.1| argininosuccinate synthase [Haemophilus somnus 129PT]
 gi|123327387|sp|Q0I4M1|ASSY_HAES1 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|112823548|gb|ABI25637.1| argininosuccinate synthase [Haemophilus somnus 129PT]
          Length = 444

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 17 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYNAIPRKAMEYGAEKARLID 73


>gi|332982459|ref|YP_004463900.1| argininosuccinate synthase [Mahella australiensis 50-1 BON]
 gi|332700137|gb|AEE97078.1| argininosuccinate synthase [Mahella australiensis 50-1 BON]
          Length = 403

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 48/154 (31%), Gaps = 7/154 (4%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L +SGG D+S  + W  + +   V  ++ D GQ  ++E      ++         
Sbjct: 3   KEKVVLAYSGGLDTSIIIPWLKENYDYEVIAVAVDVGQGEELEPLREKAIK---TGASKI 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           + + L ++ +         +  +        +   ++    +  R +         A   
Sbjct: 60  YIEDLKKEFVEDFIF---PTLKAGAIYEGKYLLGTSMARPLIAKRLVEIAEAEGAQAIAH 116

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           G T         + +      H  I A     ++
Sbjct: 117 GATGKGNDQVRFELTIKALNPHIKIIAPWRIWDI 150


>gi|317014429|gb|ADU81865.1| GMP synthase [Helicobacter pylori Gambia94/24]
          Length = 508

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 52/180 (28%), Gaps = 16/180 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DS+   +       D +  +  D+G   K E E    + K +     +  
Sbjct: 211 KVLCAVSGGVDSTVVATLLHRAIKDNLIAVFVDHGLLRKNEKEKVQAMFKDL-----QIP 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  +   + L+ L  +S   L + +            F        L        ++  
Sbjct: 266 LNTIDAKEVFLSKLKGVSEPELKRKII----GETFIEVFEKEAKKHHLKG------KIEF 315

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   S         I+       L       +  PL  L K E   L +++G
Sbjct: 316 LAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEARLLGKELG 375


>gi|311111279|ref|ZP_07712676.1| GMP synthase [Lactobacillus gasseri MV-22]
 gi|311066433|gb|EFQ46773.1| GMP synthase [Lactobacillus gasseri MV-22]
          Length = 504

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 57/186 (30%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS   +       D++  +  D+G   K E +    V + + + +   
Sbjct: 210 KKVILGLSGGVDSSVTATLLHKAIGDQLTAIFVDHGMLRKDEGD---QVMQALNKDLGVN 266

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       L  L  ++     + +  K             +++ FL         + 
Sbjct: 267 IIRVNAQKRF-LDKLKGVTDPEQKRKIIGKEFIEVFNEEAKKLKDVDFLAQGTLYTDVIE 325

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                                 TI++      L  + H  +  PL  L K E  +L + +
Sbjct: 326 ---------------SGTNTAQTIKSHHNVGGLPEDMHFELIEPLRKLFKDEVRELGEKL 370

Query: 188 GGQDLV 193
           G    +
Sbjct: 371 GIPHDL 376


>gi|300934617|ref|ZP_07149873.1| cell cycle protein MesJ [Corynebacterium resistens DSM 45100]
          Length = 344

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 22/58 (37%), Gaps = 2/58 (3%)

Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIVELMPKW 67
          ++  SGG DS   L  A+     V  +  D+G ++  E   E      + +     + 
Sbjct: 2  VVGLSGGADSLALLIVAIRFGMEVHAVIVDHGLQDGSEQVAETARQQAEDLGAASARV 59


>gi|291229392|ref|XP_002734665.1| PREDICTED: tRNA 5-methylaminomethyl-2-thiouridylate
           methyltransferase-like [Saccoglossus kowalevskii]
          Length = 390

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 55/196 (28%), Gaps = 14/196 (7%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--------QRNKVELECRLCVRKKIVEL 63
           +   SGG DSS        +  RV  L                + +      V  K+   
Sbjct: 11  VCGMSGGVDSSVAALLLKRQGFRVTGLFMKNWDSLDESGICSTEGDYNDAQFVCDKLDIP 70

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-- 121
           + +        H +    L +   +  T N  +        + F+      F   A    
Sbjct: 71  LHQVSFVKEYWHDVFSNFLKE-YENGTTPNPDILCNKLIKFDKFLNYAMKNFDAHALATG 129

Query: 122 -LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKY 178
             A   G  +++        +G    +       +T     +   +      PL  L K 
Sbjct: 130 HYARTSGGYSVLTNPESVKKNGIALLKGLDANKDQTFFLSQISQNALQKTIFPLGELMKK 189

Query: 179 ETWKLAQDIGGQDLVN 194
           E  ++A   G + +V 
Sbjct: 190 EVKEIALRAGFERIVK 205


>gi|270157460|ref|ZP_06186117.1| PP-loop family protein [Legionella longbeachae D-4968]
 gi|289164149|ref|YP_003454287.1| C32 tRNA thiolase [Legionella longbeachae NSW150]
 gi|269989485|gb|EEZ95739.1| PP-loop family protein [Legionella longbeachae D-4968]
 gi|288857322|emb|CBJ11149.1| putative C32 tRNA thiolase [Legionella longbeachae NSW150]
          Length = 280

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 54/188 (28%), Gaps = 23/188 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           ++I++    ++  SGG+DS T L+          ++ E  SF   Q      +  L    
Sbjct: 23  NMIQRGDRVMVCLSGGKDSFTLLTILNQLRRRSGNKFELFSFTLDQAQPGWNDSALRQWL 82

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
           K   +  +                     +  T ++  +          +  R    +++
Sbjct: 83  KERSIPHEI-------------------LTRDTYSIVKEKIPEGKTYCSLCSRLRRGIIY 123

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
                       +     +   +      ++          L       V  PL ++++ 
Sbjct: 124 RYAEENGFNKIALGHHRDDLVRTLMMSIFYNGDIRSMPPKLLSDNKKHIVIRPLCYVQEN 183

Query: 179 ETWKLAQD 186
           +    AQ+
Sbjct: 184 DIITYAQE 191


>gi|119946570|ref|YP_944250.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Psychromonas ingrahamii 37]
 gi|226739708|sp|A1SYT6|GUAA_PSYIN RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|119865174|gb|ABM04651.1| GMP synthase (glutamine-hydrolyzing) [Psychromonas ingrahamii 37]
          Length = 526

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 54/181 (29%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS           D++  +  D G     E +    V     +       
Sbjct: 231 VILGLSGGVDSSVVAMLLQRAIGDKLTCVFVDNGLLRLNEGQ---QVMDMFGDHFGLKII 287

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +  +H     + G+    +  K +     +                      A  L   
Sbjct: 288 HVNAEHRFLEQMAGESDPEAKRKIIGRVFVEIFDEE-----------SKKLKNAKWLAQG 336

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S     +   I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 337 TIYPDVIESAGS--KTGKAQVIKSHHNVGGLPDDMEMGLVEPLRELFKDEVRKIGLELGL 394

Query: 190 Q 190
            
Sbjct: 395 P 395


>gi|54293769|ref|YP_126184.1| hypothetical protein lpl0825 [Legionella pneumophila str. Lens]
 gi|61216435|sp|Q5WYB4|TILS_LEGPL RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
          Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
          Full=tRNA(Ile)-lysidine synthetase
 gi|53753601|emb|CAH15059.1| hypothetical protein lpl0825 [Legionella pneumophila str. Lens]
          Length = 431

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 24/53 (45%), Gaps = 11/53 (20%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR---FDRVETLSFDYG--------QRN 46
          +K+    ++ FSGG DS+  L         ++++  +  ++G        QR+
Sbjct: 14 LKQFKKLIVGFSGGLDSTVLLHVLASTPPLYNQLLAVHINHGISGNSLNWQRH 66


>gi|116628906|ref|YP_814078.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Lactobacillus gasseri ATCC 33323]
 gi|238852873|ref|ZP_04643278.1| GMP synthase [Lactobacillus gasseri 202-4]
 gi|282852575|ref|ZP_06261917.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Lactobacillus gasseri 224-1]
 gi|122274096|sp|Q046I2|GUAA_LACGA RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|116094488|gb|ABJ59640.1| GMP synthase (glutamine-hydrolyzing) [Lactobacillus gasseri ATCC
           33323]
 gi|238834567|gb|EEQ26799.1| GMP synthase [Lactobacillus gasseri 202-4]
 gi|282556317|gb|EFB61937.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Lactobacillus gasseri 224-1]
          Length = 517

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 57/186 (30%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS   +       D++  +  D+G   K E +    V + + + +   
Sbjct: 223 KKVILGLSGGVDSSVTATLLHKAIGDQLTAIFVDHGMLRKDEGD---QVMQALNKDLGVN 279

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       L  L  ++     + +  K             +++ FL         + 
Sbjct: 280 IIRVNAQKRF-LDKLKGVTDPEQKRKIIGKEFIEVFNEEAKKLKDVDFLAQGTLYTDVIE 338

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                                 TI++      L  + H  +  PL  L K E  +L + +
Sbjct: 339 ---------------SGTNTAQTIKSHHNVGGLPEDMHFELIEPLRKLFKDEVRELGEKL 383

Query: 188 GGQDLV 193
           G    +
Sbjct: 384 GIPHDL 389


>gi|327398290|ref|YP_004339159.1| Argininosuccinate synthase [Hippea maritima DSM 10411]
 gi|327180919|gb|AEA33100.1| Argininosuccinate synthase [Hippea maritima DSM 10411]
          Length = 400

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVR 57
          + +    +L +SGG D+S  + W        V T + D GQ   +E      ++
Sbjct: 1  MGEIKKVVLAYSGGLDTSVIVKWLQDKYGCEVITYTADLGQNEDLEPIKEKALK 54


>gi|292492808|ref|YP_003528247.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Nitrosococcus halophilus Nc4]
 gi|291581403|gb|ADE15860.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Nitrosococcus halophilus Nc4]
          Length = 367

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 42/184 (22%), Gaps = 10/184 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             P  ++  SGG DSS        +   +  L          E EC   + +   +    
Sbjct: 2   NRPKVVVGLSGGVDSSVAALQLQHQGYPISGLFMKNWVDFADESEC--TIAQDREDAHAV 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   H        +         +             +  R  I        A  L
Sbjct: 60  TSLLGISLH--EANFAMEYWDQVFRYFLDEYRLGRTPNPDILCNRE-IKFKAFLNHALEL 116

Query: 127 GITNIVIGVCETDYSGYPDC-----RHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           G   I  G                 R            LG +       PL  L+K +  
Sbjct: 117 GNPLIATGHYARIEQKEGRYRLLKGRDKNKDQSYFLYTLGQKQLSHTLFPLGELEKPQVR 176

Query: 182 KLAQ 185
           ++A 
Sbjct: 177 RIAA 180


>gi|256395399|ref|YP_003116963.1| sulfate adenylyltransferase subunit 2 [Catenulispora acidiphila DSM
           44928]
 gi|256361625|gb|ACU75122.1| sulfate adenylyltransferase, small subunit [Catenulispora
           acidiphila DSM 44928]
          Length = 305

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 48/188 (25%), Gaps = 15/188 (7%)

Query: 12  LLLFSGGQDSSTCLSWALDRF----DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++LFSGG+DS+  L  A+  F         L  D G   +  +  R  + ++    +   
Sbjct: 36  VILFSGGKDSTVLLHLAVKAFWPAPVPFPLLHVDTGHNFEEVIAFRDRIAERYGLRLEVA 95

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +        +    L +           + + D      +               A    
Sbjct: 96  R----VQEWIDDGRLAERPDGLRNPLQTLPLLDAINSLRYDAAFGGARRDEERARAKER- 150

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I               R +           G    V    PL    + + W+  +  
Sbjct: 151 ---IFSLRNGFGQWEPRRQRPELWNLYNGRHRAGEHVRV---FPLSNWTERDIWRYVERE 204

Query: 188 GGQDLVNL 195
           G +     
Sbjct: 205 GIELPSIY 212


>gi|157813150|gb|ABV81320.1| putative GMP synthetase [Thulinius stephaniae]
          Length = 199

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 2/57 (3%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
          K    +LL SGG DS+ C +        D++  L  D G   K E    + +  K+ 
Sbjct: 42 KDKKVVLLASGGVDSTVCAALLXKVLPADQLFVLHIDNGFMRKDESXNVVQLLTKLG 98


>gi|304310384|ref|YP_003809982.1| predicted thiamine biosynthesis protein [gamma proteobacterium
           HdN1]
 gi|301796117|emb|CBL44322.1| predicted thiamine biosynthesis protein [gamma proteobacterium
           HdN1]
          Length = 354

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 54/180 (30%), Gaps = 3/180 (1%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ---RNKVELECRLCVRKKIV 61
           +     A+ L SGG DS   +    ++   VE ++F  G     +   +  +   ++K  
Sbjct: 1   MGIQRKAIALVSGGLDSMLAVRAMQEQGIHVEGVNFFTGFCVEGHTHAIRKQDQEKQKRN 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
             +   +    + HI  ++        +        +        F+ G+    L  A  
Sbjct: 61  NALWVAERLGIKLHIEDISEEYKDVVLNPRYGYGAHMNPCLDCKIFMVGKANAMLNRARE 120

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           L    G   I+ G                + A E+     +   +        L + E W
Sbjct: 121 LVADGGFDFIITGEVIGQRPKSQRKDTMPLIARESGAEDRIVRPLCGKNLPATLPEREGW 180


>gi|212703980|ref|ZP_03312108.1| hypothetical protein DESPIG_02033 [Desulfovibrio piger ATCC 29098]
 gi|212672593|gb|EEB33076.1| hypothetical protein DESPIG_02033 [Desulfovibrio piger ATCC 29098]
          Length = 354

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 20/62 (32%), Gaps = 2/62 (3%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
            +  +    L+  SGG+DS   +     +   V  L  D G      +     V ++   
Sbjct: 94  KLFTRDERILVALSGGKDSLALMLELSRQGYDVTGLHIDLGIPESSPV--ARGVVERFCA 151

Query: 63  LM 64
             
Sbjct: 152 KH 153


>gi|168215140|ref|ZP_02640765.1| tRNA(Ile)-lysidine synthetase [Clostridium perfringens CPE str.
           F4969]
 gi|170713441|gb|EDT25623.1| tRNA(Ile)-lysidine synthetase [Clostridium perfringens CPE str.
           F4969]
          Length = 469

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 33/124 (26%), Gaps = 9/124 (7%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALD----RFDRVETLSFDYGQRNKVELECRLCVR 57
           N +I+     L+  SGG DS   L    +        V     +    + +  E  L   
Sbjct: 12  NSMIESGDKVLVALSGGPDSVCLLHILSELRELLHIEVYAAHVN----HCLRGESALKDE 67

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
             + EL             + +  + +  + S       +              + I + 
Sbjct: 68  AYVEELCKNLNIKCFV-KRVDINKISEEQNISTEMAGREERYKFFEELKNEYSLDKIAIA 126

Query: 118 FAAT 121
             A 
Sbjct: 127 HNAN 130


>gi|169343171|ref|ZP_02864192.1| tRNA(Ile)-lysidine synthetase [Clostridium perfringens C str.
           JGS1495]
 gi|169298723|gb|EDS80799.1| tRNA(Ile)-lysidine synthetase [Clostridium perfringens C str.
           JGS1495]
          Length = 469

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 33/124 (26%), Gaps = 9/124 (7%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALD----RFDRVETLSFDYGQRNKVELECRLCVR 57
           N +I+     L+  SGG DS   L    +        V     +    + +  E  L   
Sbjct: 12  NSMIESGDKVLVALSGGPDSVCLLHILSELRELLHIEVYAAHVN----HCLRGESALKDE 67

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
             + EL             + +  + +  + S       +              + I + 
Sbjct: 68  AYVEELCKNLNIKCFV-KRVDINKISEEQNISTEMAGREERYKFFEELKNEYSLDKIAIA 126

Query: 118 FAAT 121
             A 
Sbjct: 127 HNAN 130


>gi|21243022|ref|NP_642604.1| GMP synthase [Xanthomonas axonopodis pv. citri str. 306]
 gi|24211748|sp|Q8PK88|GUAA_XANAC RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|21108531|gb|AAM37140.1| glutamine amidotransferase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 521

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 49/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D G     E +              +   
Sbjct: 226 VILGLSGGVDSSVVAALLHKAIGDKLTCVFVDTGLLRWQEGD--------------QVMA 271

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E   + +  +                +        +              A  L   
Sbjct: 272 MFAEHMGVKVIRVNAADRYFAKLEGVRDPEAKRKIIGNLFVEIFDEESNKLANAKWLAQG 331

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S     +   I++      L     + +  PL  L K E  +L  ++G 
Sbjct: 332 TIYPDVIESAGS--KTGKAHVIKSHHNVGGLPEHMKLGLVEPLRELFKDEVRRLGVELGL 389

Query: 190 Q 190
            
Sbjct: 390 P 390


>gi|24211518|sp|Q8ZU97|ASSY_PYRAE RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
          Length = 397

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 26/61 (42%), Gaps = 3/61 (4%)

Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            +L +SGG D++  + W  ++    V T++ D GQ  + +         K   +   + 
Sbjct: 5  KIVLAYSGGLDTTVAVKWLSEKFGAEVYTVTVDVGQ--EDDFSKIEERAYKAGAVQHFYI 62

Query: 69 D 69
          D
Sbjct: 63 D 63


>gi|329737901|gb|EGG74129.1| tRNA(Ile)-lysidine synthetase [Staphylococcus epidermidis VCU045]
          Length = 432

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/182 (12%), Positives = 52/182 (28%), Gaps = 27/182 (14%)

Query: 8   APSA--LLLFSGGQDSSTCLSWALDR----FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           +  A  ++  S G DS + L   L+     + ++  +  ++G R +   E      ++  
Sbjct: 9   SKKAHIVVAVSTGIDSMSLLYSLLNDYQHTYRKLTCVHVNHGLREQSYEEEA--FLREYC 66

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                          L L+ +    +S   +    + +     +     R  + L     
Sbjct: 67  HQHHI----DIYIKRLDLSDIVADGNSIQQEARQRRYE--WFGDIIAQLRADVLLTAH-- 118

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
                          + +   Y      + R           +   V+ P++ LKK E  
Sbjct: 119 -----------HLDDQFETIIYRLFTGRSTRNSLGMTYESYFNQYKVYRPMLNLKKTEIL 167

Query: 182 KL 183
             
Sbjct: 168 AY 169


>gi|320193322|gb|EFW67960.1| putative LPS biosynthesis protein [Escherichia coli WV_060327]
          Length = 380

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 48/190 (25%), Gaps = 8/190 (4%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            ++  SGG DSS     A ++   R      D G      +     + + +   +     
Sbjct: 71  CIIGLSGGLDSSYAAYIAKEKMGLRPLLFHVDAGWNTDQAVGNIEKLIEGLGLELYTEVV 130

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +  E   L L+ L      S   +  +    +   + +   R            +     
Sbjct: 131 NWEEMKDLQLSFLK-----SGIPDQDLVQDASFFSSLYKFARQHRIKHVITGSNFSTECC 185

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                     Y G      + I        L     V +    ++ +K    K+   +  
Sbjct: 186 REPEEW--GGYLGIDTLLFNDIHTKFGEKPLKTFPLVDILVYKIYYQKILGMKVHHPLNL 243

Query: 190 QDLVNLILEE 199
                   E 
Sbjct: 244 VPFNKKDAEN 253


>gi|303241606|ref|ZP_07328105.1| argininosuccinate synthase [Acetivibrio cellulolyticus CD2]
 gi|302590826|gb|EFL60575.1| argininosuccinate synthase [Acetivibrio cellulolyticus CD2]
          Length = 405

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 55/199 (27%), Gaps = 5/199 (2%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +    +L +SGG D+S  + W  + +   V  ++ D GQ  +++      ++    ++
Sbjct: 1   MSQKEKVILAYSGGLDTSIIIPWLKENYDYEVIAMAADVGQGEELDPLNEKAIKTGASKI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                 +   +D I P    G I         +            +  R     +     
Sbjct: 61  YIEDLNEVFVKDFIFPTLKAGAIYEGKYLLGTSFARPIIAKRMVEIAEREGATAICHGAT 120

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
                     + V                        +       +    + + K + + 
Sbjct: 121 GKGNDQVRFELTVKALAPHLKIIAPWRIWDIKSREDAIEYAEARNI---PIPVSKKDNYS 177

Query: 183 LAQDIGGQDLVNLILEESH 201
           + +++         LE+  
Sbjct: 178 MDRNLWHLSHEGSDLEDPW 196


>gi|291562696|emb|CBL41512.1| argininosuccinate synthase [butyrate-producing bacterium SS3/4]
          Length = 405

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 59/212 (27%), Gaps = 26/212 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L +SGG D++  + W  + +   V  +  D GQ    EL+      K       
Sbjct: 1   MKEKVILAYSGGLDTTVLIPWLKENYDYDVVCVCIDVGQ--GNELDGLEERAKYCGAF-- 56

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                L  +H++      +     +   V       N           +       +A +
Sbjct: 57  ----KLYIEHVVD-----EFCDEYIAPCVKANATYENKYLLGTAMARPLIAKILVDIAKK 107

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G   I  G                  A +  I +       + +    L          
Sbjct: 108 EGAVAICHGATGKGNDQVRFELGIKALAPDMKI-IAPWRTWNIQSREEEL---------- 156

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
           +   +  ++L  +++ + Y   R+  +    G
Sbjct: 157 EYCAKHNIDLPFKKNDS-YSRDRNIWHISHEG 187


>gi|218282969|ref|ZP_03489071.1| hypothetical protein EUBIFOR_01657 [Eubacterium biforme DSM 3989]
 gi|218216163|gb|EEC89701.1| hypothetical protein EUBIFOR_01657 [Eubacterium biforme DSM 3989]
          Length = 515

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 46/185 (24%), Gaps = 16/185 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS           +++  +  D+G            +RK   + +    
Sbjct: 218 KVLCALSGGVDSSVAAVLLSKAIGNQLTCVFVDHG-----------LLRKNEGDEVEAVF 266

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G   +  + +     +    K V    +           R              L  
Sbjct: 267 GPEGPYELNFIRVNAQQRYYEKLKGVEEP-EAKRKIIGEEFIRVFEEEAKKIGKVDFLVQ 325

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I   V E   SG                         +  PL  L K E  K   ++G
Sbjct: 326 GTIYPDVVE---SGLGGESAVIKSHHNVGGLPDHVDFKEIIEPLRDLFKDEVRKAGLELG 382

Query: 189 GQDLV 193
             + +
Sbjct: 383 IPEYL 387


>gi|150398701|ref|YP_001329168.1| GMP synthase [Sinorhizobium medicae WSM419]
 gi|226739739|sp|A6UFA3|GUAA_SINMW RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|150030216|gb|ABR62333.1| GMP synthase, large subunit [Sinorhizobium medicae WSM419]
          Length = 520

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 48/184 (26%), Gaps = 17/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS       +   D++  +  D+G      L  +      +      +
Sbjct: 223 KKVICALSGGVDSSVAALLIHEAVGDQLTCILVDHG------LMRKDEAANVVAMFKEHY 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              L   H+                    KI        F      +             
Sbjct: 277 NLHL--LHVDASDRFIGELEGVSDPETKRKIIGRLFIEVFEEEAGKLGGADFLAQGT--- 331

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                +     +   +      TI++      L    ++ +  PL  L K E   L +++
Sbjct: 332 -----LYPDVIESVSFTGGPSVTIKSHHNVGGLPERMNMQLVEPLRELFKDEVRVLGREL 386

Query: 188 GGQD 191
           G  D
Sbjct: 387 GLPD 390


>gi|90410884|ref|ZP_01218898.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Photobacterium profundum 3TCK]
 gi|90328097|gb|EAS44408.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Photobacterium profundum 3TCK]
          Length = 527

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 52/181 (28%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS           D++  +  D G     E E              +  +
Sbjct: 232 VILGLSGGVDSSVVAMLLHRAIGDKLTCVFVDNGLLRLNEGE--------------QVME 277

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+   L +  +                +        V              A  L   
Sbjct: 278 MFGDHFGLNIVHVKAEDRFLNALAGENDPEAKRKIIGHVFIDVFDEESKKLENAKWLAQG 337

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S   + +   I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 338 TIYPDVIESAAS--KNGKAHVIKSHHNVGGLPDDMEMGLVEPLRELFKDEVRKIGLELGL 395

Query: 190 Q 190
            
Sbjct: 396 P 396


>gi|28493046|ref|NP_787207.1| GMP synthase [Tropheryma whipplei str. Twist]
 gi|44887994|sp|Q83GZ6|GUAA_TROWT RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|28476086|gb|AAO44176.1| GMP synthase [Tropheryma whipplei str. Twist]
          Length = 503

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 44/184 (23%), Gaps = 19/184 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DS    +       DR+  +  D+G     E E        +       
Sbjct: 210 KRVLCALSGGVDSVVAATLTHRAIGDRLRCVFVDHGLLRLNEREQVEEYCSSLG------ 263

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                         +     S    +    I+D+      +    I              
Sbjct: 264 ------------LNVSTYDASDCFLSALSGIRDSEQKRKVIGREFIACFSKLQERFDIKP 311

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   +              TI++      L       +  PL +L K E  K+   +
Sbjct: 312 HFLLQGTLYPDLVESGATPGGATIKSHHNVGGLSDNLGFELLEPLKYLFKDEVRKIGLQL 371

Query: 188 GGQD 191
           G   
Sbjct: 372 GIPK 375


>gi|319780688|ref|YP_004140164.1| argininosuccinate synthase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317166576|gb|ADV10114.1| argininosuccinate synthase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 407

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 53/182 (29%), Gaps = 10/182 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
           M+   K     +L +SGG D+S  L W        V T + D GQ  ++E        ++
Sbjct: 1   MSK-TKDIKKVVLSYSGGLDTSIILKWLQTEFGAEVITFTADLGQGEELEP------ARR 53

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
             E+M      + +     +A        + T      +   ++    +    +      
Sbjct: 54  KAEMMGIKDIRIVDVREEFVADFVFPMFRANTVYEGTYLLGTSIARPLISKHLVDIARET 113

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH--TPLMWLKK 177
              A   G T         + S Y       + A          + +        + + K
Sbjct: 114 GADAIAHGATGKGNDQVRFELSAYALNPDIKVIAPWRDWTFKSRTDLMNFAEQHQIPVPK 173

Query: 178 YE 179
            +
Sbjct: 174 DK 175


>gi|319789617|ref|YP_004151250.1| PP-loop domain protein [Thermovibrio ammonificans HB-1]
 gi|317114119|gb|ADU96609.1| PP-loop domain protein [Thermovibrio ammonificans HB-1]
          Length = 309

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 20/60 (33%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
            +  K    L+  SGG+DS +                   G +     E  L + +K+ E
Sbjct: 47  KMFSKREKVLVAVSGGKDSLSLWFALHRLGYETYGFHVSLGIKGWDYSERSLEMCRKLSE 106


>gi|303243602|ref|ZP_07329944.1| argininosuccinate synthase [Methanothermococcus okinawensis IH1]
 gi|302486163|gb|EFL49085.1| argininosuccinate synthase [Methanothermococcus okinawensis IH1]
          Length = 417

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 3/65 (4%)

Query: 3  DIIKKAPS-ALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI 60
          D++ +    A+L +SGG D+S CL    D++  +V +   D GQ  +   E      KK 
Sbjct: 17 DMMAEKEKIAVLAYSGGLDTSCCLKLLEDKYNYKVVSACVDVGQPEEDLKEPEEK-AKKY 75

Query: 61 VELMP 65
               
Sbjct: 76 GVYAH 80


>gi|302805751|ref|XP_002984626.1| hypothetical protein SELMODRAFT_120847 [Selaginella moellendorffii]
 gi|300147608|gb|EFJ14271.1| hypothetical protein SELMODRAFT_120847 [Selaginella moellendorffii]
          Length = 532

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 1/50 (2%)

Query: 11  ALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKK 59
           A+   SGG DS+   +       DR+  +  D G     E E  +   K+
Sbjct: 229 AICALSGGVDSTVAATIVHKVMGDRLHCVFVDNGLLRYKERERVMETFKR 278


>gi|222445379|ref|ZP_03607894.1| hypothetical protein METSMIALI_01007 [Methanobrevibacter smithii
           DSM 2375]
 gi|222434944|gb|EEE42109.1| hypothetical protein METSMIALI_01007 [Methanobrevibacter smithii
           DSM 2375]
          Length = 391

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 55/191 (28%), Gaps = 23/191 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L FSGG D+S C+    +++D  V T   D GQ ++ E+     + K+I       
Sbjct: 2   DKVVLAFSGGLDTSVCVKLLEEKYDVEVITACVDVGQGDE-EIAKAEKMAKEIGGY---- 56

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                + + +      +   +           +             +       +A + G
Sbjct: 57  -----KHYTID---AKEEFANEYIARGIKANAEYEGYPLSTALARPLIAQKIIDIAKKEG 108

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            T I  G        +         +    I              + L + E    A + 
Sbjct: 109 ATAIAHGCTGKGNDQFRFEAVILAMSDLDIIA---------PIRELNLTRTEEQAYAAEN 159

Query: 188 GGQDLVNLILE 198
           G +   + I  
Sbjct: 160 GIKLNSDKIYS 170


>gi|330447769|ref|ZP_08311417.1| galactosyl transferase, GDP-mannosepyrophosphorylase,
           phosphomannomutase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491960|dbj|GAA05914.1| galactosyl transferase, GDP-mannosepyrophosphorylase,
           phosphomannomutase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 562

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
           A+   SGG DS   ++  L R  ++E L+F Y QR++ E+      
Sbjct: 238 AVSTLSGGLDSRVIVAELLKRGVQLECLNFSY-QRSQDEVYAEAFA 282


>gi|327480910|gb|AEA84220.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas stutzeri DSM 4166]
          Length = 362

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 50/182 (27%), Gaps = 10/182 (5%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++  SGG DSS      L++  +VE L     + +     C    ++ + +         
Sbjct: 2   IVGMSGGVDSSVSALLLLEQGYQVEGLFMKNWEEDDGTEYC--TAKEDLADAQAVCDRIG 59

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
            + H        +   +     +A            +  R  I        A  LG   I
Sbjct: 60  IKLHT--ANFAAEYWDNVFEHFLAEYKAGRTPNPDILCNRE-IKFKAFLDYALMLGADLI 116

Query: 132 -----VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                V        S                  +G E       P+  L+K E   +A+ 
Sbjct: 117 ATGHYVRRRDRDGRSELLKGLDPNKDQSYFLHAVGGEQLAKTLFPVGELEKPEVRAIAEK 176

Query: 187 IG 188
            G
Sbjct: 177 HG 178


>gi|325567405|ref|ZP_08144072.1| GMP synthase [Enterococcus casseliflavus ATCC 12755]
 gi|325158838|gb|EGC70984.1| GMP synthase [Enterococcus casseliflavus ATCC 12755]
          Length = 521

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 56/186 (30%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V + +       
Sbjct: 224 KKVLLGLSGGVDSSVVGVLLQKAIGDQLTCIFVDHGLLRKGE---AEQVMESLGGKFG-- 278

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      L I+   +       +A                  +F   A  LA   G
Sbjct: 279 -----------LNIIKVDAKERFLSKLAGVSDPEEKRKIIGNEFVYVFDDEATKLAGDEG 327

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           ++ +  G   TD          TI++      L  +    +  PL  L K E  +L   +
Sbjct: 328 VSFLAQGTLYTDVIESGTETAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRELGTQL 387

Query: 188 GGQDLV 193
           G  D +
Sbjct: 388 GMPDSI 393


>gi|323442047|gb|EGA99682.1| hypothetical protein SAO46_2006 [Staphylococcus aureus O46]
          Length = 431

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 57/188 (30%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++  S G DS   L   L+ +      +  L  ++G R+    E              ++
Sbjct: 15  VVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEES-------------RF 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            ++  E H + L I       SL +N +++ +       +      +        A+ L 
Sbjct: 62  LEAYCERHHIDLHIKKLDLSHSLNRNNSIQNEARIKRYEWFDEMMNVLEADVLLTAHHLD 121

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    + +   Y      + R       L       ++ PL+ + K E  +  +  
Sbjct: 122 --------DQLETIMYRIFNGKSTRNKLGFDELSKRKGYQIYRPLLAVSKKEIKQFQERY 173

Query: 188 GGQDLVNL 195
                 + 
Sbjct: 174 HIPYFEDE 181


>gi|307265334|ref|ZP_07546891.1| ExsB family protein [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919618|gb|EFN49835.1| ExsB family protein [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 83

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 5/64 (7%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCL---SWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M + + +  +AL+ FSGG DS+         L   +RV  ++       K EL+  + + 
Sbjct: 1  MQEYLSRLDNALIAFSGGVDSTFLAKVSYDVL--GNRVLAVTATSPMHPKSELKEAVELA 58

Query: 58 KKIV 61
          KKI 
Sbjct: 59 KKIG 62


>gi|302341803|ref|YP_003806332.1| tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase
           [Desulfarculus baarsii DSM 2075]
 gi|301638416|gb|ADK83738.1| putative tRNA (5-methylaminomethyl-2-thiouridylate)
           -methyltransferase [Desulfarculus baarsii DSM 2075]
          Length = 329

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 39/133 (29%), Gaps = 21/133 (15%)

Query: 1   MNDIIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           MN I  K P +AL L+SGG DS              + ++F      +         R+ 
Sbjct: 1   MNHITAKHPATALGLYSGGLDSMLAALVLRRAGVAAQVVTF------QSPFFAAEAARRS 54

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
            + L           H++ L              V    + +          +   L  A
Sbjct: 55  ALALD-------LPHHVVEL-------GEDYLAMVQHPPRGHGSQMNPCVDCHAFMLARA 100

Query: 120 ATLAYRLGITNIV 132
             L   LG+  + 
Sbjct: 101 GRLMDELGLDFLF 113


>gi|291523374|emb|CBK81667.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain or B
           subunit/GMP synthase (glutamine-hydrolyzing), N-terminal
           domain or A subunit [Coprococcus catus GD/7]
          Length = 513

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 52/187 (27%), Gaps = 21/187 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS            ++  +  D+G            +RK   + +    
Sbjct: 217 KVLCALSGGVDSSVAAVLLSKAIGKQLTCVFVDHG-----------LLRKNEGDEVEAVF 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G   +  + +     +    K V                    F+      A ++G 
Sbjct: 266 GPDGPYELNFIRVNAQQRYYDKLKGVTEPEAK-------RKIIGEEFIRVFEEEAKKIGS 318

Query: 129 -TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLAQD 186
              +V G    D       +   I++      L        +  PL  L K E  K   +
Sbjct: 319 VDFLVQGTIYPDVIESGLGKSAVIKSHHNVGGLPDVVDFKEIIEPLRMLFKDEVRKAGLE 378

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 379 LGIPEYL 385


>gi|283788201|ref|YP_003368066.1| argininosuccinate synthetase [Citrobacter rodentium ICC168]
 gi|282951655|emb|CBG91355.1| argininosuccinate synthetase [Citrobacter rodentium ICC168]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLID 72


>gi|257459455|ref|ZP_05624564.1| argininosuccinate synthase [Campylobacter gracilis RM3268]
 gi|257442880|gb|EEV18014.1| argininosuccinate synthase [Campylobacter gracilis RM3268]
          Length = 435

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 5/82 (6%)

Query: 3   DIIKKA-PSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVR--- 57
           ++ KK     +L +SGG D+S  L W  D     V T + D GQ   +E      ++   
Sbjct: 28  EMAKKDVKKVVLAYSGGLDTSIILKWLGDTYGCDVVTFTADIGQNEDLEPIKNKALKLGI 87

Query: 58  KKIVELMPKWKDSLGEDHILPL 79
           KK    +   ++    D++ P+
Sbjct: 88  KKENIFVEDLREEFVRDYVFPM 109


>gi|148656258|ref|YP_001276463.1| GMP synthase [Roseiflexus sp. RS-1]
 gi|148568368|gb|ABQ90513.1| GMP synthase (glutamine-hydrolyzing) [Roseiflexus sp. RS-1]
          Length = 512

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 46/185 (24%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DS+           DR+  +  D G   + E      V     E    
Sbjct: 214 NGRVICALSGGVDSAVAALIVHRAIGDRLTCVFVDNGLLRQGE---AEQVVATFREHFHI 270

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     L      D    +L      + +   +   FV                  
Sbjct: 271 P---------LIAVDAADEFLDALAGVADPEQKRKIIGEKFVRIFEREARRIEGARFLAQ 321

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G           +       +  TI+       L  +  +T+  PL +L K E       
Sbjct: 322 GTLY----PDVIESKAPDRQKGVTIKTHHNVGGLPADMQLTLVEPLRYLFKDEVRAAGLA 377

Query: 187 IGGQD 191
           +G  +
Sbjct: 378 LGLPE 382


>gi|27469192|ref|NP_765829.1| hypothetical protein SE2274 [Staphylococcus epidermidis ATCC 12228]
 gi|57866063|ref|YP_187744.1| MesJ/Ycf62 family protein [Staphylococcus epidermidis RP62A]
 gi|242241594|ref|ZP_04796039.1| cell cycle control ATP-binding protein MesJ [Staphylococcus
           epidermidis W23144]
 gi|293366151|ref|ZP_06612838.1| tRNA(Ile)-lysidine synthase [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|61217168|sp|Q5HRP5|TILS_STAEQ RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|61217351|sp|Q8CQV3|TILS_STAES RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|27316741|gb|AAO05916.1|AE016751_211 conserved hypothetical protein [Staphylococcus epidermidis ATCC
           12228]
 gi|57636721|gb|AAW53509.1| MesJ/Ycf62 family protein [Staphylococcus epidermidis RP62A]
 gi|242234975|gb|EES37286.1| cell cycle control ATP-binding protein MesJ [Staphylococcus
           epidermidis W23144]
 gi|291319745|gb|EFE60104.1| tRNA(Ile)-lysidine synthase [Staphylococcus epidermidis
           M23864:W2(grey)]
          Length = 432

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/182 (12%), Positives = 52/182 (28%), Gaps = 27/182 (14%)

Query: 8   APSA--LLLFSGGQDSSTCLSWALDR----FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           +  A  ++  S G DS + L   L+     + ++  +  ++G R +   E      ++  
Sbjct: 9   SKKAHIVVAVSTGIDSMSLLYSLLNDYQHTYRKLTCVHVNHGLREQSYEEEA--FLREYC 66

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                          L L+ +    +S   +    + +     +     R  + L     
Sbjct: 67  HQHHI----DIYIKRLDLSDIVADGNSIQQEARQRRYE--WFGDIIAQLRADVLLTAH-- 118

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
                          + +   Y      + R           +   V+ P++ LKK E  
Sbjct: 119 -----------HLDDQFETIIYRLFTGRSTRNSLGMTYESYFNQYKVYRPMLNLKKTEIL 167

Query: 182 KL 183
             
Sbjct: 168 AY 169


>gi|315654863|ref|ZP_07907768.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mobiluncus curtisii ATCC 51333]
 gi|315490824|gb|EFU80444.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mobiluncus curtisii ATCC 51333]
          Length = 412

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 37/134 (27%), Gaps = 5/134 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDY--GQRNKVELECRLCVRKKIVELMPKW 67
             L+  SGG DS+   +        V           R              + +   + 
Sbjct: 11  KILVGLSGGVDSAVATARLQAAGHEVSGFFMQLESPSRPWSRPVTSAEPVDALAD-AHRV 69

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D LG +  +    L +  +  +  +     +D   PN  V     I   +    A R G
Sbjct: 70  ADFLGVELQVW--DLAERFNRVVMDSFVQAYRDGLTPNPCVHCNRFIKFGYVIERARREG 127

Query: 128 ITNIVIGVCETDYS 141
              +  G     + 
Sbjct: 128 FDYVATGHYARLWR 141


>gi|282915827|ref|ZP_06323595.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
           D139]
 gi|283768944|ref|ZP_06341853.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
           H19]
 gi|282320318|gb|EFB50660.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
           D139]
 gi|283461125|gb|EFC08211.1| tRNA(Ile)-lysidine synthase [Staphylococcus aureus subsp. aureus
           H19]
          Length = 431

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 56/179 (31%), Gaps = 25/179 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++  S G DS   L   L+ +      +  L  ++G R+    E              ++
Sbjct: 15  VVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEEA-------------RF 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            ++  E H + L I       SL +N +++ +       +      +        A+ L 
Sbjct: 62  LEAYCERHHIDLHIKKLDLSHSLNRNNSIQNEARIKRYEWFDEMMNVLEADVLLTAHHLD 121

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                    + +   Y      + R       L       ++ PL+ + K E  +  + 
Sbjct: 122 --------DQLETIMYRIFNGKSTRNKLGFDELSKRKDYQIYRPLLAVSKKEIKQFQER 172


>gi|257462948|ref|ZP_05627353.1| GMP synthase [Fusobacterium sp. D12]
 gi|317060567|ref|ZP_07925052.1| bifunctional GMP synthase/glutamine amidotransferase [Fusobacterium
           sp. D12]
 gi|313686243|gb|EFS23078.1| bifunctional GMP synthase/glutamine amidotransferase [Fusobacterium
           sp. D12]
          Length = 512

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 52/184 (28%), Gaps = 18/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS   +       D++  +  D G   K E      V +   E     
Sbjct: 216 KKVILGLSGGVDSSVAATLIHKAIGDQLTCIFVDTGLLRKNE---AKTVMEVYSEHFHMN 272

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +    L+ L  +S     + +  K              +  FL         + 
Sbjct: 273 IKCVNAEERF-LSKLKGVSDPEQKRKIIGKEFIEVFNEEAKKFEDAEFLAQGTIYPDVIE 331

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                        S        TI++      L  +    +  PL  L K E  ++ + +
Sbjct: 332 -------------SVSVKGPSVTIKSHHNVGGLPEDMKFQLLEPLRELFKDEVREVGRQL 378

Query: 188 GGQD 191
           G   
Sbjct: 379 GIPH 382


>gi|300775359|ref|ZP_07085221.1| asparagine synthase (glutamine-hydrolyzing) [Chryseobacterium gleum
           ATCC 35910]
 gi|300506099|gb|EFK37235.1| asparagine synthase (glutamine-hydrolyzing) [Chryseobacterium gleum
           ATCC 35910]
          Length = 610

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/193 (10%), Positives = 46/193 (23%), Gaps = 7/193 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV---ELMPKWKD 69
           ++ SGG DS+     +      +   +  Y   ++ E++      +      E+     +
Sbjct: 267 VMMSGGIDSTLIAYKSKSYNADINAYTISYPF-SEEEVKNAALAAQHFGVSHEVKEVSDE 325

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E     +    +   S      A K   +      + G     L    +   +L   
Sbjct: 326 EALEHLKENIQHFEEPYSSFEVLINAAKYAHDKNFKVLLSGNGADELFAGYSHTLKLNRW 385

Query: 130 NIV--IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +                                     +    + + K    +   + 
Sbjct: 386 LFMRNFNCINPFIFTKDKFSQRLKNYFSQDNMFDFFRQSQISMRPLEV-KSVIKQEIYNT 444

Query: 188 GGQDLVNLILEES 200
              DL    L E+
Sbjct: 445 IDPDLSKYHLSET 457


>gi|225076855|ref|ZP_03720054.1| hypothetical protein NEIFLAOT_01906 [Neisseria flavescens
          NRL30031/H210]
 gi|224951800|gb|EEG33009.1| hypothetical protein NEIFLAOT_01906 [Neisseria flavescens
          NRL30031/H210]
          Length = 447

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 19 IAFSGGLDTSAALLWMKRKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 75


>gi|261403929|ref|YP_003240170.1| tRNA(Ile)-lysidine synthetase [Paenibacillus sp. Y412MC10]
 gi|261280392|gb|ACX62363.1| tRNA(Ile)-lysidine synthetase [Paenibacillus sp. Y412MC10]
          Length = 476

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 53/188 (28%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFD-----RVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           ++  SGG DS   L    +        R+      +G R + + E      + + EL   
Sbjct: 30  VVAVSGGPDSVALLHVLHEISQHRTPLRLICAHVHHGFRKESDQE-----AEMVRELAE- 83

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                          LG    ++     A   +           +   FL+  A      
Sbjct: 84  --------------SLGLPLETAFIDIPAYMEESGKGGQEAAREKRYEFLLQTARKHNAR 129

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +        + +       R   +  +        E  V +  P + + K +  +L + 
Sbjct: 130 SVALAHHADDQAETVFMRLLRGSGLSGLGGIKFKRTEKKVELIRPFLRMYKADIVELCRV 189

Query: 187 IGGQDLVN 194
            G Q  V+
Sbjct: 190 CGFQYAVD 197


>gi|28572257|ref|NP_789037.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Tropheryma whipplei TW08/27]
 gi|44887995|sp|Q83ID3|GUAA_TROW8 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|28410388|emb|CAD66774.1| GMP synthase [glutamine-hydrolyzing] [Tropheryma whipplei TW08/27]
          Length = 503

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 44/184 (23%), Gaps = 19/184 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DS    +       DR+  +  D+G     E E        +       
Sbjct: 210 KRVLCALSGGVDSVVAATLTHRAIGDRLRCVFVDHGLLRLNEREQVEEYCSSLG------ 263

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                         +     S    +    I+D+      +    I              
Sbjct: 264 ------------LNVSTYDASDCFLSALSGIRDSEQKRKVIGREFIACFSKLQERFDIKP 311

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   +              TI++      L       +  PL +L K E  K+   +
Sbjct: 312 HFLLQGTLYPDLVESGATPGGATIKSHHNVGGLSDNLGFELLEPLKYLFKDEVRKIGLQL 371

Query: 188 GGQD 191
           G   
Sbjct: 372 GIPK 375


>gi|28199394|ref|NP_779708.1| cell cycle protein [Xylella fastidiosa Temecula1]
 gi|61217346|sp|Q87BE2|TILS_XYLFT RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|28057500|gb|AAO29357.1| cell cycle protein [Xylella fastidiosa Temecula1]
          Length = 437

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 42/159 (26%), Gaps = 7/159 (4%)

Query: 11  ALLLFSGGQDSSTCLSWAL----DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            L+ FSGG DS+  L         R   +E +   +G     +     C           
Sbjct: 17  VLVAFSGGLDSTVLLHCLASQPTQRIHGLEAIHIHHGLNENADAWTAHCAA---FCTQHD 73

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +  +   H+   +  G  + +   +  A      +     +              A R 
Sbjct: 74  IRLHIARVHVSHNSGQGLEAAARTARRAAFAHTLQHGHYLALAHHCDDQAETWLLRALRG 133

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH 165
               +      T ++     R     +    ++   + H
Sbjct: 134 SCDGLAAMRPLTPFAAGHLWRPLLTHSRAQLLDYAQQQH 172


>gi|311105158|ref|YP_003978011.1| argininosuccinate synthase [Achromobacter xylosoxidans A8]
 gi|310759847|gb|ADP15296.1| argininosuccinate synthase [Achromobacter xylosoxidans A8]
          Length = 446

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W  +        + + GQ ++ + +              +  D
Sbjct: 16 IAFSGGLDTSAALLWMRNNGAIPYAYTANLGQPDESDYDEIPRKAMAYGAEKARLID 72


>gi|284043336|ref|YP_003393676.1| GMP synthase, large subunit [Conexibacter woesei DSM 14684]
 gi|283947557|gb|ADB50301.1| GMP synthase, large subunit [Conexibacter woesei DSM 14684]
          Length = 533

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 49/185 (26%), Gaps = 17/185 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS           D++  +  D+G   K E E  +   +          
Sbjct: 236 RVICALSGGVDSSVAALLVHRAIGDQLTCVFVDHGLMRKNEGEQVITAFR---------- 285

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + + +PL  +              + +           R           A     
Sbjct: 286 ----DHYKVPLVAVDAEERFLNRLRGVTEPEQKRKAIGDEFIRVFEEESAKL--AEGGAR 339

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +              TI++      L  +    +  PL  L K E   +  ++G
Sbjct: 340 FLVQGTLYSDVIESGGGTGAATIKSHHNVGGLPDDLQFELVEPLRALFKDEVRAVGAELG 399

Query: 189 GQDLV 193
             + +
Sbjct: 400 LPERL 404


>gi|57641218|ref|YP_183696.1| ATPase [Thermococcus kodakarensis KOD1]
 gi|57159542|dbj|BAD85472.1| predicted ATPase, PP-loop superfamily [Thermococcus kodakarensis
          KOD1]
          Length = 215

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 20/57 (35%), Gaps = 2/57 (3%)

Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
          L+SGG+DSS            V  ++  +G       +      +++       K S
Sbjct: 7  LYSGGKDSSLAAWILAKLGYEVRLVTVTFG--TLDNWKYAEETARRLGFEHEILKLS 61


>gi|309972437|gb|ADO95638.1| tRNA(Ile)-lysidine synthetase [Haemophilus influenzae R2846]
          Length = 430

 Score = 45.3 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 31/84 (36%), Gaps = 8/84 (9%)

Query: 1  MNDIIKKAPSA-----LLLFSGGQDSSTCL---SWALDRFDRVETLSFDYGQRNKVELEC 52
          ++DI K+   A     L+  SGG DS+  L   +    +   +  LS      +      
Sbjct: 4  LSDIEKQLKKATAQAFLIALSGGLDSTVLLSLFAKLRQKQPHLPPLSVRAIHIHHGLSPN 63

Query: 53 RLCVRKKIVELMPKWKDSLGEDHI 76
               +   +L  +++  L  + +
Sbjct: 64 AESWVQHCQDLCDQFQIPLIIERV 87


>gi|329896815|ref|ZP_08271731.1| GMP synthase (glutamine-hydrolyzing) [gamma proteobacterium
           IMCC3088]
 gi|328921570|gb|EGG28950.1| GMP synthase (glutamine-hydrolyzing) [gamma proteobacterium
           IMCC3088]
          Length = 526

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 53/187 (28%), Gaps = 25/187 (13%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPK 66
              LL  SGG DSS   +       D++  +  D G  R     +      + +   + +
Sbjct: 229 DKVLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRLNEGDQVMAMFAQNMGVKVIR 288

Query: 67  WKD---SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  LG+   +           ++   V  +         ++    I   V  +  A
Sbjct: 289 ADAEDLFLGKLEGVSDPEAKRKIIGNMFIEVFDQEATKLTDVNWLAQGTIYPDVIESAGA 348

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
                  I                    ++      L  +  +++  PL  L K E  K+
Sbjct: 349 ETGKAHVI--------------------KSHHNVGGLPEDMKMSLVEPLRELFKDEVRKI 388

Query: 184 AQDIGGQ 190
             ++G  
Sbjct: 389 GLELGLP 395


>gi|325922091|ref|ZP_08183885.1| GMP synthase (glutamine-hydrolyzing) [Xanthomonas gardneri ATCC
           19865]
 gi|325547428|gb|EGD18488.1| GMP synthase (glutamine-hydrolyzing) [Xanthomonas gardneri ATCC
           19865]
          Length = 521

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 49/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D G     E +              +   
Sbjct: 226 VILGLSGGVDSSVVAALLHKAIGDKLTCVFVDTGLLRWQEGD--------------QVMA 271

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E   + +  +                +        +              A  L   
Sbjct: 272 MFAEHMGVKVIRVNAADRYFAKLEGVSDPEAKRKIIGNLFVDIFDEESNKLANAKWLAQG 331

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S     +   I++      L     + +  PL  L K E  +L  ++G 
Sbjct: 332 TIYPDVIESAGS--KTGKAHVIKSHHNVGGLPEHMKLGLVEPLRELFKDEVRRLGVELGL 389

Query: 190 Q 190
            
Sbjct: 390 P 390


>gi|270692163|ref|ZP_06222906.1| argininosuccinate synthase [Haemophilus influenzae HK1212]
 gi|270316085|gb|EFA28099.1| argininosuccinate synthase [Haemophilus influenzae HK1212]
          Length = 85

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 22/65 (33%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          + K     + FSGG D+S  L W   +       + + GQ ++ +               
Sbjct: 9  LPKGQKVGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYNAIPKKAMAYGAEN 68

Query: 65 PKWKD 69
           +  D
Sbjct: 69 ARLID 73


>gi|260913666|ref|ZP_05920142.1| argininosuccinate synthase [Pasteurella dagmatis ATCC 43325]
 gi|260632205|gb|EEX50380.1| argininosuccinate synthase [Pasteurella dagmatis ATCC 43325]
          Length = 446

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 22/65 (33%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          + K     + FSGG D+S  L W           + + GQ ++ +         +     
Sbjct: 9  LPKGQKVGIAFSGGLDTSAALLWMRQNGAIPYAYTANLGQPDEDDYNAIPRKAMEYGAEN 68

Query: 65 PKWKD 69
           +  D
Sbjct: 69 ARLID 73


>gi|257065335|ref|YP_003145007.1| argininosuccinate synthase [Slackia heliotrinireducens DSM 20476]
 gi|256792988|gb|ACV23658.1| argininosuccinate synthase [Slackia heliotrinireducens DSM 20476]
          Length = 404

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQ 44
          + +    +L +SGG D+S  L W   ++   V  +  + GQ
Sbjct: 1  MSEKKKVVLAYSGGLDTSVVLKWLQVEKNLDVIAICGNVGQ 41


>gi|229496306|ref|ZP_04390026.1| GMP synthase [Porphyromonas endodontalis ATCC 35406]
 gi|229316884|gb|EEN82797.1| GMP synthase [Porphyromonas endodontalis ATCC 35406]
          Length = 506

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 56/188 (29%), Gaps = 21/188 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +    LL  SGG DSS             +  +  D+G    +  +    V +    L  
Sbjct: 211 QNDKVLLALSGGVDSSVVAVLLNKAIGRNLTCIFVDHG---LLRKDEATQVMQDYRCLG- 266

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                        L ++G  +H      +A              G   +   F A  A  
Sbjct: 267 -------------LNVIGVDAHEQFYNALAGVTDPEQKRKIIGKGFIDV---FEAEAAKI 310

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
             +  +  G    D     +     I++      L     + +  P+  L K E  ++ +
Sbjct: 311 KDVKWLGQGTIYPDVIESINITGMVIKSHHNVGGLPERMKLKLVEPIRALFKDEVRRVGR 370

Query: 186 DIGGQDLV 193
            +G QD +
Sbjct: 371 ALGMQDHL 378


>gi|225420299|ref|ZP_03762602.1| hypothetical protein CLOSTASPAR_06642 [Clostridium asparagiforme
           DSM 15981]
 gi|225041116|gb|EEG51362.1| hypothetical protein CLOSTASPAR_06642 [Clostridium asparagiforme
           DSM 15981]
          Length = 499

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/202 (10%), Positives = 48/202 (23%), Gaps = 21/202 (10%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWAL----DRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           ++++    +   SGG DS   L+       +   +V  +   +G R     +      + 
Sbjct: 17  MLRQGGRVVAAVSGGADSVCLLALLCGLRGELGIQVRAVHVHHGLR----GDEADRDAEF 72

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           + +L   +K       +           S       ++ +                    
Sbjct: 73  VRQLCEGFKVPFALRRVDVREFARAKKLSEEEAGRLLRYRVFEECAGAWERGAWAEWADE 132

Query: 120 ATL----AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG---------MESHV 166
            T+    A             +           D    I   +  G              
Sbjct: 133 GTIGPEGAGGGNAWLKADRAADGVRVAVAHHGDDQAETILHNLCRGSGLKGLGGMRPVRG 192

Query: 167 TVHTPLMWLKKYETWKLAQDIG 188
            +  PL+ + + E  +     G
Sbjct: 193 RIIRPLIAVSRKEILEWLAANG 214


>gi|217976569|ref|YP_002360716.1| GMP synthase, large subunit [Methylocella silvestris BL2]
 gi|217501945|gb|ACK49354.1| GMP synthase, large subunit [Methylocella silvestris BL2]
          Length = 534

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 57/185 (30%), Gaps = 12/185 (6%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   L   SGG DS+       +   +R+  +  D+G   + E        +++V L   
Sbjct: 231 SGRVLCGLSGGVDSAVAALLIFEAIGERLTCVFVDHGLLRQGE-------AEEVVTLFR- 282

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   H +    L   + + +      +     L  T                   L
Sbjct: 283 -GHYNIPLHHVEAKALFLGALTGVRDPEEKRKIIGRLFITAFEAEAKKIAADGRGAPEFL 341

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+    +      TI++      L    ++ +  PL  L K E   L ++
Sbjct: 342 AQGTLYPDVIESV--SFSGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRALGRE 399

Query: 187 IGGQD 191
           +G  +
Sbjct: 400 LGLPE 404


>gi|160903135|ref|YP_001568716.1| carbamoyl-phosphate synthase, large subunit [Petrotoga mobilis SJ95]
 gi|160360779|gb|ABX32393.1| carbamoyl-phosphate synthase, large subunit [Petrotoga mobilis SJ95]
          Length = 1496

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 56/195 (28%), Gaps = 10/195 (5%)

Query: 5    IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQ---RNKVELECRLCVRKKI 60
            +K     +L +SGG D+S  + W  +++   +  +  D GQ    + +E +       K+
Sbjct: 1081 MKTGEKVVLAYSGGLDTSVIIPWLKEKYNCEIIAVCIDVGQGEETHVIEKKALSSGASKV 1140

Query: 61   VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
               +    +    D+I P    G I         +            +  +    ++   
Sbjct: 1141 --YVEDVVEEFVTDYIFPTLKAGAIYEGKYLLGTSFARPLMAKKLVEIAQKEGANVIAHG 1198

Query: 121  TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES----HVTVHTPLMWLK 176
                        + +   D S                  +         +++    ++  
Sbjct: 1199 CTGKGNDQVRFEVSIKALDPSIKIIAPWRIWEIKSREEEIAYAQKKGIPISITKEKIYSV 1258

Query: 177  KYETWKLAQDIGGQD 191
                W ++ + G  +
Sbjct: 1259 DKNIWHISHEGGDLE 1273


>gi|21231622|ref|NP_637539.1| GMP synthase [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66768256|ref|YP_243018.1| GMP synthase [Xanthomonas campestris pv. campestris str. 8004]
 gi|188991393|ref|YP_001903403.1| GMP synthase [Xanthomonas campestris pv. campestris str. B100]
 gi|24211745|sp|Q8P8Q6|GUAA_XANCP RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|81305769|sp|Q4UVC5|GUAA_XANC8 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226739766|sp|B0RSB6|GUAA_XANCB RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|21113314|gb|AAM41463.1| glutamine amidotransferase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66573588|gb|AAY48998.1| glutamine amidotransferase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|167733153|emb|CAP51351.1| GMP synthase (glutamine-hydrolysing) [Xanthomonas campestris pv.
           campestris]
          Length = 521

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 49/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D G     E +              +   
Sbjct: 226 VILGLSGGVDSSVVAALLHKAIGDKLTCVFVDTGLLRWQEGD--------------QVMA 271

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E   + +  +                +        +              A  L   
Sbjct: 272 MFAEHMGVKVIRVNAADRYFAKLEGVSDPEAKRKIIGNLFVDIFDEESNKLANAKWLAQG 331

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S     +   I++      L     + +  PL  L K E  +L  ++G 
Sbjct: 332 TIYPDVIESAGS--KTGKAHVIKSHHNVGGLPEHMKLGLVEPLRELFKDEVRRLGVELGL 389

Query: 190 Q 190
            
Sbjct: 390 P 390


>gi|332296197|ref|YP_004438120.1| tRNA methyl transferase [Thermodesulfobium narugense DSM 14796]
 gi|332179300|gb|AEE14989.1| tRNA methyl transferase [Thermodesulfobium narugense DSM 14796]
          Length = 337

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 50/198 (25%), Gaps = 10/198 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP- 65
                ++  SGG DS        +    V  L       ++        + + +      
Sbjct: 1   MNKRVIVGISGGIDSFYTAFLLRNSGFDVICLYIKLFDNHE-TFFRAKMLGELLGVKFEF 59

Query: 66  ----KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
               K       D  + + +LG   +     N+ +K +   L                  
Sbjct: 60  YDAIKEFKKEVVDRSINMTLLGYTPNPCAFCNMKIKFR--ILEKIRSDFNYDYISTGHYV 117

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
             +   IT I  G  E     Y      +I        LG  +   V   +    KY  W
Sbjct: 118 KIFHDDITRIFRGFDEKKDQSYFLALVPSIYLKNAIFPLGDFTKKYVKKVMQE--KYSFW 175

Query: 182 KLAQDIGGQDLVNLILEE 199
           K          V    ++
Sbjct: 176 KDISSSQDLCFVKKGYKK 193


>gi|315122142|ref|YP_004062631.1| GMP synthase [Candidatus Liberibacter solanacearum CLso-ZC1]
 gi|313495544|gb|ADR52143.1| GMP synthase [Candidatus Liberibacter solanacearum CLso-ZC1]
          Length = 520

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 56/184 (30%), Gaps = 17/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS       +     +  +  D+G   K E++  + + KK  +     
Sbjct: 223 ERVICALSGGVDSSVAAFLIYEAIGKNLTCVLVDHGFMRKNEVDNVVGLFKKYPDF---- 278

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                     PL ++             +  +D       +              A  LG
Sbjct: 279 ----------PLIVVDASERFIGKLKNVIDPEDKRKIIGKLFIEVFEEEAEKIGGAKFLG 328

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   V E+    +       I++      L    ++ +  PL  L K E   L +++
Sbjct: 329 QGTLYPDVIESV--SFFGGPSSVIKSHHNVGGLPEYMNMDLVEPLRDLFKDEVRLLGKEL 386

Query: 188 GGQD 191
           G  D
Sbjct: 387 GLSD 390


>gi|295100171|emb|CBK89260.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain or B
           subunit/GMP synthase (glutamine-hydrolyzing), N-terminal
           domain or A subunit [Eubacterium cylindroides T2-87]
          Length = 515

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 50/188 (26%), Gaps = 22/188 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS           +++  +  D+G   K E +    V            
Sbjct: 218 KVLCALSGGVDSSVAAVLLSKAIGNQLTCVFVDHGLLRKNEGDEVEAV------------ 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G +    L  +   +       +A  ++               F+      A ++G 
Sbjct: 266 --FGPEGPYELNFIRVNAQERYYNKLAGVVEPEAKRKII----GEEFIRVFEEEAKKIGA 319

Query: 129 TNIV---IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            + +       +   SG                         +  PL  L K E  K   
Sbjct: 320 VDFLVQGTIYPDVVESGLGGESAVIKSHHNVGGLPDHVDFKEIIEPLRDLFKDEVRKAGL 379

Query: 186 DIGGQDLV 193
           ++G  + +
Sbjct: 380 ELGIPENL 387


>gi|288930595|ref|YP_003434655.1| argininosuccinate synthase [Ferroglobus placidus DSM 10642]
 gi|288892843|gb|ADC64380.1| argininosuccinate synthase [Ferroglobus placidus DSM 10642]
          Length = 395

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 54/200 (27%), Gaps = 7/200 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             +L +SGG D++ C+    +++  + V T++ D GQ  +   +     +K   +     
Sbjct: 3   KVVLCYSGGLDTTVCIPLLREKYGFEEVVTVTVDIGQPEEELKKAEERGKKYADKHYTVD 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                   +  L          +      +              N   +   AT      
Sbjct: 63  AKEDFVKALFQLIKANGEYEGYVLGTALARPIIAEKVVEIAKKENADAIAHGATGKGNDQ 122

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +    I          P    +  R  E          + V     W      W  + + 
Sbjct: 123 LRFDNIFFQHGFKVVAPMRELNLTREWEIEYAKKHGIDIPVTKDKPWSIDENLWSRSIEG 182

Query: 188 GGQD-----LVNLILEESHT 202
           G  +         I E +++
Sbjct: 183 GKLEDPSYIPPEDIYEWTNS 202


>gi|297544089|ref|YP_003676391.1| GMP synthase, large subunit [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296841864|gb|ADH60380.1| GMP synthase, large subunit [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 512

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 54/185 (29%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DSS           D++  +  D G   K E +  +   +K         
Sbjct: 219 KAVCALSGGVDSSVAAVLVDRAIHDQLVCIFVDTGLLRKNEGDMVIETFRK--------- 269

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                D  +      D   S L      + +   + N F+       L          G 
Sbjct: 270 ---NYDMNIIRVDAKDRFLSRLKGVTDPEEKRKIIGNVFIEVFKEEALKIGDVKFLVQGT 326

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
               +       S         I++      L  +    +  PL  L K E  ++ +++G
Sbjct: 327 LYPDVIESGNGVSST-------IKSHHNVGGLPEDIGFELIEPLKMLFKDEVRQVGKELG 379

Query: 189 GQDLV 193
             + +
Sbjct: 380 IPEEI 384


>gi|289577802|ref|YP_003476429.1| GMP synthase, large subunit [Thermoanaerobacter italicus Ab9]
 gi|289527515|gb|ADD01867.1| GMP synthase, large subunit [Thermoanaerobacter italicus Ab9]
          Length = 512

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 54/185 (29%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DSS           D++  +  D G   K E +  +   +K         
Sbjct: 219 KAVCALSGGVDSSVAAVLVDRAIHDQLVCIFVDTGLLRKNEGDMVIETFRK--------- 269

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                D  +      D   S L      + +   + N F+       L          G 
Sbjct: 270 ---NYDMNIIRVDAKDRFLSRLKGVTDPEEKRKIIGNVFIEVFKEEALKIGDVKFLVQGT 326

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
               +       S         I++      L  +    +  PL  L K E  ++ +++G
Sbjct: 327 LYPDVIESGNGVSST-------IKSHHNVGGLPEDIGFELIEPLKMLFKDEVRQVGKELG 379

Query: 189 GQDLV 193
             + +
Sbjct: 380 IPEEI 384


>gi|121602609|ref|YP_988663.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Bartonella bacilliformis KC583]
 gi|226738390|sp|A1URR0|GUAA_BARBK RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|120614786|gb|ABM45387.1| GMP synthase [Bartonella bacilliformis KC583]
          Length = 518

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 49/185 (26%), Gaps = 18/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS       +   D++  +  D+G    +       V K   +    
Sbjct: 221 KNRVICGLSGGVDSSVTAVLLHEAIGDQLTCIFVDHG---LIRKNEAEEVLKLFRDNYN- 276

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     + L  +                +        +              A  L
Sbjct: 277 ----------IELIHVNAADMFINALEGETDPEKKRKTIGRLFIEVFEEETKKIGGAKFL 326

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+  +         I++      L    ++ +  PL  L K +   L ++
Sbjct: 327 AQGTLYPDVIESVSAIGEAIT---IKSHHNVGGLPERMNMKLVEPLRELFKDDVRSLGRE 383

Query: 187 IGGQD 191
           +G  +
Sbjct: 384 LGLPE 388


>gi|325971025|ref|YP_004247216.1| argininosuccinate synthase [Spirochaeta sp. Buddy]
 gi|324026263|gb|ADY13022.1| Argininosuccinate synthase [Spirochaeta sp. Buddy]
          Length = 406

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 49/184 (26%), Gaps = 16/184 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                +L +SGG D+S  L W  ++   V     + GQ    E    +  +         
Sbjct: 2   NKEKIILAYSGGLDTSVILKWLANKGFDVIAYVANVGQN---EDFAAIEKKALATGASKV 58

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           + + L ++ +         +++         I +          R II        A + 
Sbjct: 59  YVEDLRKELVTDYIFPALKANT---------IYEGTYMLGTSLARPIIAKRQIEI-ARKE 108

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   +  G                +   E  I    +    +        + +    AQ 
Sbjct: 109 GTVYVAHGATGKGNDQVRFEFGYYMHMPEVKIISPWKDPEWLSQFEG---RSDMIAYAQK 165

Query: 187 IGGQ 190
            G  
Sbjct: 166 YGIP 169


>gi|323438741|gb|EGA96481.1| hypothetical protein SAO11_2434 [Staphylococcus aureus O11]
          Length = 431

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 57/188 (30%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++  S G DS   L   L+ +      +  L  ++G R+    E              ++
Sbjct: 15  VVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEES-------------RF 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            ++  E H + L I       SL +N +++ +       +      +        A+ L 
Sbjct: 62  LEAYCERHHIDLHIKKLDLSHSLNRNNSIQNEARIKRYEWFDEMMNVLEADVLLTAHHLD 121

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    + +   Y      + R       L       ++ PL+ + K E  +  +  
Sbjct: 122 --------DQLETIMYRIFNGKSTRNKLGFDELSKRKGYQIYRPLLAVSKKEIKQFQERY 173

Query: 188 GGQDLVNL 195
                 + 
Sbjct: 174 HIPYFEDE 181


>gi|291286025|ref|YP_003502841.1| GMP synthase, large subunit [Denitrovibrio acetiphilus DSM 12809]
 gi|290883185|gb|ADD66885.1| GMP synthase, large subunit [Denitrovibrio acetiphilus DSM 12809]
          Length = 515

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 44/184 (23%), Gaps = 18/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D +  +  D G   K E +      +         
Sbjct: 219 KRVLCGLSGGVDSSVAAVLIHRAIGDNLTCVFVDNGLLRKDEGKQVEDAFR--------- 269

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    + L  +                +        +  R              L 
Sbjct: 270 -----NQFKMNLVAVNAEDRFLSVLKGVTDPEKKRKAIGNMFVRIFEEESSKLGEFEFLA 324

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   V E+     P      I+       L  +    +  PL  L K E  ++  ++
Sbjct: 325 QGTLYPDVIESVSFKGPSAT---IKTHHNVGGLPEDMKFKLLEPLRELFKDEVRRVGLEL 381

Query: 188 GGQD 191
           G  +
Sbjct: 382 GIPE 385


>gi|160936272|ref|ZP_02083645.1| hypothetical protein CLOBOL_01168 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441082|gb|EDP18806.1| hypothetical protein CLOBOL_01168 [Clostridium bolteae ATCC
           BAA-613]
          Length = 424

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/214 (11%), Positives = 56/214 (26%), Gaps = 23/214 (10%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           I      +L +SGG D++  + W  +     V     D GQ ++++         K+   
Sbjct: 13  INMKEKVVLAYSGGLDTTAIIPWLKEHFGYEVICCCIDCGQGSELDGLDERA---KLSGA 69

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              + + L +D      +       +        +   ++    +  R +         A
Sbjct: 70  SKLYIEDLVDDFCDNYIM---PCVKANAVYENKYLLGTSMARPAIAKRLVDIARKEGASA 126

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              G T         +           I A     ++                + +  + 
Sbjct: 127 ICHGATGKGNDQIRFELGIKALAPDIKIIAPWRMTDV-----------WTMQSREDEIEY 175

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
            +  G     +       + Y   R+  +    G
Sbjct: 176 CKQHGIDLPFSAD-----SSYSRDRNLWHISHEG 204


>gi|150005368|ref|YP_001300112.1| putative sulfate adenylate transferase, subunit 2 [Bacteroides
           vulgatus ATCC 8482]
 gi|149933792|gb|ABR40490.1| putative sulfate adenylate transferase, subunit 2 [Bacteroides
           vulgatus ATCC 8482]
          Length = 289

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 60/183 (32%), Gaps = 4/183 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             ++ FSGG+DS  CL  A  ++  D++E +  D G  +    +    V K++   +   
Sbjct: 2   KIIVSFSGGKDSQACLIQAAKQYGADKIEAVFCDTGWEHPDTYQHITDVCKQMGVRITTL 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           K        +                V +K++        +    II     A+ +Y+  
Sbjct: 62  KPEF-NFIEICKKYRRFPDPIRRFCTVDLKVKPMVDYILSLQESCIIIEGIRASESYKRS 120

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    ++ ++     +  + R  +     GM     + +   W    E      + 
Sbjct: 121 SMEEECMYFKSYFTPNEKGKFASYRKKDVKEWCGMYDASVLRSVFRW-TAQEVIDCILNA 179

Query: 188 GGQ 190
           G +
Sbjct: 180 GQK 182


>gi|121998009|ref|YP_001002796.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Halorhodospira halophila SL1]
 gi|121589414|gb|ABM61994.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Halorhodospira halophila SL1]
          Length = 354

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          + + P A+ L SGG DS        D+   VE ++F  G
Sbjct: 1  MPEQPKAVALISGGLDSMLAARVVQDQGVHVEGINFYTG 39


>gi|71898703|ref|ZP_00680872.1| PP-loop [Xylella fastidiosa Ann-1]
 gi|71731468|gb|EAO33530.1| PP-loop [Xylella fastidiosa Ann-1]
          Length = 435

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 42/159 (26%), Gaps = 7/159 (4%)

Query: 11  ALLLFSGGQDSSTCLSWAL----DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            L+ FSGG DS+  L         R   +E +   +G     +     C           
Sbjct: 15  VLVAFSGGLDSTVLLHCLASQPTQRIHGLEAIHIHHGLNENADAWTAHCAA---FCTQHD 71

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +  +   H+   +  G  + +   +  A      +     +              A R 
Sbjct: 72  IRLHIARVHVSHNSGQGLEAAARTARRAAFAHTLQHGHYLALAHHCDDQAETWLLRALRG 131

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH 165
               +      T ++     R     +    ++   + H
Sbjct: 132 SCDGLAAMRPLTPFAAGHLWRPLLTHSRAQLLDYAQQQH 170


>gi|313898455|ref|ZP_07831992.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Clostridium sp. HGF2]
 gi|312956837|gb|EFR38468.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Clostridium sp. HGF2]
          Length = 513

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 54/185 (29%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS   +       D++  +  D+G   K E      V +     M  
Sbjct: 215 TDKVLLGLSGGVDSSVVAALLHKAIGDQLICMFIDHGLLRKGE---AESVMETFGREMNI 271

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +          L  ++  S  +     I +  +       + +             
Sbjct: 272 NLVKIDA----KERFLSKLAGVSDPEKKRKIIGNEFVYTFDEEVKKLTS---------GE 318

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  +  G   TD          TI++      L  +    +  PL  L K E   L  +
Sbjct: 319 DIKWLAQGTLYTDVIESGTKTAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGTE 378

Query: 187 IGGQD 191
           +G  D
Sbjct: 379 LGLPD 383


>gi|296131746|ref|YP_003638993.1| tRNA(Ile)-lysidine synthetase [Thermincola sp. JR]
 gi|296030324|gb|ADG81092.1| tRNA(Ile)-lysidine synthetase [Thermincola potens JR]
          Length = 471

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 23/176 (13%), Positives = 47/176 (26%), Gaps = 6/176 (3%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ-RNKVELECRLCVRKKI 60
             +++     ++  SGG DS   L+  L R  +   L+   G   +    +        +
Sbjct: 12  YKMLEPGDKVVVGVSGGPDS-VALAHILTRLAKEFRLTIHIGHLNHMFRGKEAELDAASV 70

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             L  K       + I   A L +   S+      ++          V    I     A 
Sbjct: 71  ARLAEKLGLPCTVERIDVPAYLSEHRVSAQAGARYIRYAFFEKLADEVGANRIATGHHAD 130

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
             A  +    ++  +  +  SG               +       +  +     L 
Sbjct: 131 DQAETV----LMNFLRGSGVSGLTGIPPVRQGKYIRPLIEVSRQEIENYCRYFDLP 182


>gi|291541927|emb|CBL15037.1| argininosuccinate synthase [Ruminococcus bromii L2-63]
          Length = 407

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 49/161 (30%), Gaps = 12/161 (7%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRK 58
           M D   K    +L +SGG D+S  + W  + +    V  +S D GQ  +++      ++ 
Sbjct: 1   MAD--NKIKKVVLAYSGGLDTSIIIPWLKENYDNCEVIAVSGDVGQGTELDGLEEKAIKT 58

Query: 59  KIVELM-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
              +L          +++I+P    G +            +   +     +  R +    
Sbjct: 59  GASKLYIEDLNKEFVDEYIIPTVKAGAVYEG-------KYLLGTSFARPIIAKRLVEIAK 111

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI 158
                A   G T         + +         I A     
Sbjct: 112 AEGADAICHGCTGKGNDQVRFELAIKAYAPDMKIIAPWRTW 152


>gi|258405487|ref|YP_003198229.1| PP-loop domain-containing protein [Desulfohalobium retbaense DSM
          5692]
 gi|257797714|gb|ACV68651.1| PP-loop domain protein [Desulfohalobium retbaense DSM 5692]
          Length = 299

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 15/41 (36%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
           +       L+  SGG+DS   L    D    V  L  D G
Sbjct: 42 RLFTPEDRILVAVSGGKDSLALLWQLRDLGYNVHGLHVDLG 82


>gi|220927124|ref|YP_002502426.1| argininosuccinate synthase [Methylobacterium nodulans ORS 2060]
 gi|219951731|gb|ACL62123.1| argininosuccinate synthase [Methylobacterium nodulans ORS 2060]
          Length = 413

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 9/86 (10%)

Query: 1  MNDIIKKA-PSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRK 58
          M+D  +K     +L +SGG D+S  L W        V T + D GQ  ++E        +
Sbjct: 1  MSDKTQKRVQKVVLAYSGGLDTSIILKWLQTTYGCEVVTFTADLGQGEELEP--ARRKAE 58

Query: 59 KIV-----ELMPKWKDSLGEDHILPL 79
           +        +   ++    D++ P+
Sbjct: 59 LLGIKPENIFIEDLREEFVRDYVFPM 84


>gi|145612487|ref|XP_001412111.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|145019644|gb|EDK03872.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 415

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 3/69 (4%)

Query: 7  KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +   + L +SGG D+ST L W +++   V     + GQ  + + +      KK+     
Sbjct: 1  MSKGRVCLAYSGGLDTSTILVWLIEQGYTVVCFLANVGQ--EEDWDEVKAKAKKLGAEEM 58

Query: 66 KWKDSLGED 74
             D   E 
Sbjct: 59 VILDLQKEF 67


>gi|145612495|ref|XP_367244.2| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|145019648|gb|EDK03876.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 415

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 3/69 (4%)

Query: 7  KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +   + L +SGG D+ST L W +++   V     + GQ  + + +      KK+     
Sbjct: 1  MSKGRVCLAYSGGLDTSTILVWLIEQGYTVVCFLANVGQ--EEDWDEVKAKAKKLGAEEM 58

Query: 66 KWKDSLGED 74
             D   E 
Sbjct: 59 VILDLQKEF 67


>gi|332886244|gb|EGK06488.1| GMP synthase [Dysgonomonas mossii DSM 22836]
          Length = 506

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 52/187 (27%), Gaps = 21/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D+G   K E E  L   + +       
Sbjct: 213 DKVILALSGGVDSSVTAVLLNKAIGKNLTCVFVDHGLLRKNEFENVLKDYEHLG------ 266

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                         L  I  ++  +         +              VF         
Sbjct: 267 --------------LNVIGVNAKDRFYKALAGVTDPEQKRKIIGKGFIDVFDEEAHKLTD 312

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           I++      L  + H+ +  PL  L K E  ++  ++
Sbjct: 313 IKWLGQGTIYPDIIESLSITGTVIKSHHNVGGLPEKMHLKLVEPLRLLFKDEVRRVGLEL 372

Query: 188 GGQDLVN 194
           G ++ + 
Sbjct: 373 GMKENLI 379


>gi|260592846|ref|ZP_05858304.1| tRNA(Ile)-lysidine synthase [Prevotella veroralis F0319]
 gi|260535216|gb|EEX17833.1| tRNA(Ile)-lysidine synthase [Prevotella veroralis F0319]
          Length = 461

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 24/67 (35%), Gaps = 3/67 (4%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR---NKVELECRLCVRKKI 60
          ++K     L+  SGG DS   L          + +  ++  R   +  + E    + K++
Sbjct: 14 LLKPKAHCLVALSGGADSVALLLTMRQLGYETDAVHCNFHLRGDESNRDEEYCQSLCKQL 73

Query: 61 VELMPKW 67
             +   
Sbjct: 74 NIPLHIA 80


>gi|269795521|ref|YP_003314976.1| argininosuccinate synthase [Sanguibacter keddieii DSM 10542]
 gi|269097706|gb|ACZ22142.1| argininosuccinate synthase [Sanguibacter keddieii DSM 10542]
          Length = 414

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 17/53 (32%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
               +L +SGG D S      A      V  ++ D GQ  +     R     
Sbjct: 1  MTERVVLAYSGGLDTSVAIGWIAERTGAEVIAVAVDVGQGGEDLEVIRQRALD 53


>gi|241895795|ref|ZP_04783091.1| argininosuccinate synthase [Weissella paramesenteroides ATCC 33313]
 gi|241870838|gb|EER74589.1| argininosuccinate synthase [Weissella paramesenteroides ATCC 33313]
          Length = 407

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 45/170 (26%), Gaps = 13/170 (7%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               +L +SGG D+S  ++W  +    V     D G     E +  + +++K        
Sbjct: 3   KEKVVLAYSGGLDTSVEIAWLKNAGYDVIACCIDVG-----EEKDLVKIQEK-------- 49

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +G    + +    + +   +   +                   +       +A + G
Sbjct: 50  GKQVGAIESVVIDAQQEFAEEYVLVALQAHAYYEGKYPLISALSRPLIAKKLVEVAKQYG 109

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
            T I  G                  A E  I   +          +   K
Sbjct: 110 ATAIAHGCTGKGNDQVRFETEIHALAPEMKIEDPIRDQHMSREMEIAYAK 159


>gi|138896163|ref|YP_001126616.1| NH(3)-dependent NAD(+) synthetase [Geobacillus thermodenitrificans
           NG80-2]
 gi|196250117|ref|ZP_03148811.1| NAD+ synthetase [Geobacillus sp. G11MC16]
 gi|134267676|gb|ABO67871.1| NH(3)-dependent NAD(+) synthetase [Geobacillus thermodenitrificans
           NG80-2]
 gi|196210301|gb|EDY05066.1| NAD+ synthetase [Geobacillus sp. G11MC16]
          Length = 246

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/184 (11%), Positives = 47/184 (25%), Gaps = 23/184 (12%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           A++  SGG DS+         F             +   +       K + + +   +  
Sbjct: 24  AVVGISGGIDSAVVAHLIKRAFPD----------NSLGLIMPCKSHAKDMEDALKVVESC 73

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
             +  ++ L  +      ++   +    + N              L      A       
Sbjct: 74  GIQHLVIDLTEVHKSLFGAVEAELKAIGEWNEEKARLGDANTRARLRMTTLYAVANNYGY 133

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +V+G                     T              PL+   K E  ++A+ +G  
Sbjct: 134 LVVGTDNAAE-------------WHTGYFTKYGDGGVDLVPLIHFTKGEVREMARLLGVP 180

Query: 191 DLVN 194
           + + 
Sbjct: 181 EEII 184


>gi|110004286|emb|CAK98624.1| gmp synthase [glutamine-hydrolyzing] protein [Spiroplasma citri]
          Length = 512

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 52/187 (27%), Gaps = 28/187 (14%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           + + +L  SGG DSS C          ++  +  D G                ++     
Sbjct: 215 SDNVVLALSGGVDSSVCAVLLHKAIGKQLTCIFVDTG----------------LLRQDSG 258

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           W D         L I+   +       +        + N     + I  L         +
Sbjct: 259 WNDLQKFQEKFKLNIIKIAAQERFLTAL------KGVTNPEQKRKIIGNLFIEIFNEEAI 312

Query: 127 GITNIVIGVCETDY-----SGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            I N+      T Y     S        TI++      L       +  PL  L K E  
Sbjct: 313 KIKNVKWLGQGTIYPDVIESISVKGPSATIKSHHNVGGLPKNLPFQLIEPLRELFKDEVR 372

Query: 182 KLAQDIG 188
           +  + +G
Sbjct: 373 RTGEALG 379


>gi|33152309|ref|NP_873662.1| argininosuccinate synthase [Haemophilus ducreyi 35000HP]
 gi|33148532|gb|AAP96051.1| argininosuccinate synthetase [Haemophilus ducreyi 35000HP]
          Length = 443

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 17 IAFSGGLDTSAALLWMRKKGAIPYAYTANLGQPDENDYNAIPNKAMEYGAENARLID 73


>gi|82750216|ref|YP_415957.1| hypothetical protein SAB0458 [Staphylococcus aureus RF122]
 gi|82655747|emb|CAI80146.1| conserved hypothetical protein [Staphylococcus aureus RF122]
          Length = 431

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 57/188 (30%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++  S G DS   L   L+ +      +  L  ++G R+    E              ++
Sbjct: 15  VVAVSTGIDSMCLLYQLLNDYKDSYRKLTCLHVNHGVRSASIEEA-------------RF 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            ++  E H + L I       SL +N +++ +       +      +        A+ L 
Sbjct: 62  LEAYCEGHHIDLHIKKLDLSHSLNRNNSIQNEARIKRYEWFDEMMNVLEADVLLTAHHLD 121

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    + +   Y      + R       L       ++ PL+ + K E  +  +  
Sbjct: 122 --------DQLETIMYRIFNGKSTRNKLGFDELSKRKGYQIYRPLLAVSKKEIKQFQERY 173

Query: 188 GGQDLVNL 195
                 + 
Sbjct: 174 HIPYFEDE 181


>gi|318042580|ref|ZP_07974536.1| PP family ATPase [Synechococcus sp. CB0101]
          Length = 287

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 35/249 (14%), Positives = 74/249 (29%), Gaps = 49/249 (19%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
           +   I + P+AL+ +SGG DS+   + A ++   +   ++           E      + 
Sbjct: 22  LRASIARQPAALVAYSGGVDSALVAAIAAEQLGAQALAITGVSPALAPHLREEAQLQAQW 81

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +            E   +  + L D ++SS   +             +   R +  L+  
Sbjct: 82  MG----------IEHREIATSELNDPAYSSNPAD-----------RCYACKRELHTLLAE 120

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
              A         + +   ++    D R     A E          V      + + K  
Sbjct: 121 MRDAAAAAGFEAAVVLDGVNHDDLGDHRPGIRAAQERG--------VISPLAELGISKAG 172

Query: 180 TWKLAQDIGGQ---------DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKG 230
              +++ +G                   E  +    +R +R              LRQ+G
Sbjct: 173 VRAISRALGFPWWDKPAQPCLASRFPYGEVIS---AERLQRVARAEAW-------LRQRG 222

Query: 231 WMEFKEKYQ 239
           + E + + Q
Sbjct: 223 FAELRVRSQ 231


>gi|225631266|ref|ZP_03787949.1| bifunctional GMP synthase/glutamine [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225591040|gb|EEH12239.1| bifunctional GMP synthase/glutamine [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 520

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 61/189 (32%), Gaps = 24/189 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS   +        ++  +  D G   K +           + ++ +
Sbjct: 220 EKKVIAAVSGGVDSSVAAALTHKAIGKQLNCIFIDTGLLRKNQT----------IAMLKE 269

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +  +   L L+ L  I+     + +                 ++ FL+     +  +
Sbjct: 270 IPINYVDKSNLFLSRLKGITDPEEKRKIIGNTFVEVFEEEAKKIGDVDFLMQGTIYSDVV 329

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                         SG+      TI++      L  + ++ +  PL +L K E   L ++
Sbjct: 330 E-------------SGHASNNTSTIKSHHNVGGLPEKMNLKLVEPLRYLFKDEVRLLGKE 376

Query: 187 IGGQDLVNL 195
           IG  D +  
Sbjct: 377 IGLSDEIIF 385


>gi|219126278|ref|XP_002183388.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405144|gb|EEC45088.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 368

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 48/188 (25%), Gaps = 8/188 (4%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYG------QRNKVELECRLCVRKKIVELMPK 66
           LL SGG DSS  L+  + +   V                     E    V +++ E    
Sbjct: 3   LLLSGGVDSSVALNLLVQQGYDVTAFYLKIWLEDELAHLGHCPWEDDYRVCQEVCEQAGI 62

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +++   +     ++    H +            N    F      I       +A   
Sbjct: 63  PLETVSLQNAYKSRVIAYTVHEAEQGRTPNPDIMCNSRVKFGCFYEAIDQREFDFVASGH 122

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +      +                     L  +    V  P+  L+K +   LA +
Sbjct: 123 YAQLVKDTETGSMR--LLRAPDPIKDQSYFLCTLTQDQLQRVLFPIGHLQKSQVRDLADE 180

Query: 187 IGGQDLVN 194
               + + 
Sbjct: 181 FILPNRLR 188


>gi|315453947|ref|YP_004074217.1| GMP synthase [Helicobacter felis ATCC 49179]
 gi|315132999|emb|CBY83627.1| GMP synthase (glutamine-hydrolyzing) [Helicobacter felis ATCC
           49179]
          Length = 514

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 55/187 (29%), Gaps = 16/187 (8%)

Query: 8   APSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   L   SGG DSS   +  A    ++VE +  D+G     E +          ++   
Sbjct: 215 SDRVLCAVSGGVDSSVVAALCARALKEQVEVVFVDHGLLRAGERD----------QVARM 264

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           + D     H+L    L       + +    +    +        +         +    +
Sbjct: 265 FADLQIPLHVLDAQDLFLSRLKGVVEPEQKRQIIGHAFIEVFEQK-----AQELSKQGSI 319

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                     +   S         I++      L  + ++ +  PL  L K E   L   
Sbjct: 320 KWLAQGTLYPDVIESVSAKGPSAVIKSHHNVGGLPEKMNLKLLEPLRELFKDEVRALGAR 379

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 380 LGLPEKM 386


>gi|168333408|ref|ZP_02691688.1| GMP synthase, large subunit [Epulopiscium sp. 'N.t. morphotype B']
          Length = 513

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 49/187 (26%), Gaps = 21/187 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            ALL  SGG DSS             +  +  D+G   K E +    +     +L     
Sbjct: 217 KALLALSGGVDSSVAAMILSKAIGKGLTCVFVDHGLLRKNEGDEVEAIFADKNKL----- 271

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                     L  +        +K    K+     P          F+      A ++G 
Sbjct: 272 ---------DLNFIR----VDASKRFYAKLAGVTDPEAKRKIIGEEFIRVFEEEAKKIGA 318

Query: 129 TNIVI--GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +  +   +         +                      +  PL  L K E  K+  +
Sbjct: 319 VDFFVQGTIYPDIIESGLNKSAVIKSHHNVGGLPDYVDFKEIIEPLRLLFKDEVRKVGIE 378

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 379 LGLDSKL 385


>gi|163758298|ref|ZP_02165386.1| putative LPS biosynthesis protein WbpG [Hoeflea phototrophica
           DFL-43]
 gi|162284587|gb|EDQ34870.1| putative LPS biosynthesis protein WbpG [Hoeflea phototrophica
           DFL-43]
          Length = 360

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/176 (9%), Positives = 41/176 (23%), Gaps = 7/176 (3%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            ++  SGG DS+           R   +  D G  +++ +         +   +     +
Sbjct: 58  CVIGVSGGVDSTYVAWLVKKLGLRPLAVHLDNGWNSELAVANIEKTLNTLGIDLYTHVLN 117

Query: 71  LGEDHILPLAILGD-------ISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
             E   L  + L          +  ++   +      + L +       +   +      
Sbjct: 118 WEEFRNLQSSFLKASTPDGEVPTDHAIFALLYELAAKHGLKHVITGTNVVSEAILPEKWG 177

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           Y       V  V +   +                        +      +   K E
Sbjct: 178 YGYFDWRYVKDVHKRFGTSRLSTYPHFSLIKLAYFVFIRRIRMVSILNYVNYDKAE 233


>gi|119953460|ref|YP_945669.1| tRNA-specific 2-thiouridylase MnmA [Borrelia turicatae 91E135]
 gi|254811445|sp|A1R0A7|MNMA_BORT9 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|119862231|gb|AAX17999.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Borrelia turicatae 91E135]
          Length = 354

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 58/219 (26%), Gaps = 22/219 (10%)

Query: 13  LLFSGGQDSSTCLSWALDRFD---RVET--------LSFDYGQRNKVELECRLCVRKKIV 61
           +L SGG DSS  L   + +     +           LS+      K ++     V KK  
Sbjct: 5   VLLSGGVDSSVALYIMIQKGYKNIKCYYLKIWLEDELSYIGECPWKEDINYVEAVCKKFN 64

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                          +    + ++   +         Q       F        L+    
Sbjct: 65  VPYEIISLQDEYYKRVVTYAIEELKIGNTPSPDIFCNQRIKFGAFFDKINEHYDLIVTGH 124

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            A             + D+      +           +L  +    +H PL  L K E  
Sbjct: 125 YAKIEN---------KNDHYILKQAKDKIKDQSYFLSHLSRKQISKLHFPLGDLLKTEIR 175

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNS 220
           ++AQ I   +      +    C+LGK        Y    
Sbjct: 176 QIAQKIDLPNKNRKDSQGI--CFLGKIKYDEFIKYHLGE 212


>gi|330719943|gb|EGG98405.1| Argininosuccinate synthase [gamma proteobacterium IMCC2047]
          Length = 405

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 46/161 (28%), Gaps = 11/161 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKK 59
           M DI       +L +SGG D+S    W  + +   V T + D GQ  +VE          
Sbjct: 1   MFDI----KKVVLAYSGGLDTSVICKWIQETYNCEVVTFTADLGQGEEVEPARAKAEALG 56

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           I E+       + +     +         +        +   ++    +  R I      
Sbjct: 57  IKEI------YIDDLREEFVRDFVFPMFRANAIYEGEYLLGTSIARPLITKRLIEIANET 110

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              A   G T         +   Y       + A     +L
Sbjct: 111 GADAIAHGATGKGNDQVRFELGAYALKPGVKVIAPWREWDL 151


>gi|320202086|gb|EFW76661.1| Argininosuccinate synthase [Escherichia coli EC4100B]
          Length = 241

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 72


>gi|315636879|ref|ZP_07892103.1| GMP synthase [Arcobacter butzleri JV22]
 gi|315478709|gb|EFU69418.1| GMP synthase [Arcobacter butzleri JV22]
          Length = 511

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 51/188 (27%), Gaps = 19/188 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS   +   +   ++V  +  D G     E E    + K        
Sbjct: 215 NKKVLCAVSGGVDSSVVATLLAEAIGEQVIPVFVDNGLLRANEREQVETMFKSRGVN--- 271

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     L      +   S L      + +   +  TF+   ++     +       
Sbjct: 272 ----------LITVDASETFLSKLAGVTDPEKKRKIIGETFIEVFDVEAKKHSGIEFLAQ 321

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G         +   S        TI++      L       +  PL  + K E   L  +
Sbjct: 322 G-----TLYTDVIESVSVKGPSKTIKSHHNVGGLPDWMKFELIEPLREIFKDEVRALGLE 376

Query: 187 IGGQDLVN 194
           +G    + 
Sbjct: 377 LGLPKSMI 384


>gi|294934128|ref|XP_002780993.1| hypothetical protein Pmar_PMAR018043 [Perkinsus marinus ATCC 50983]
 gi|239891164|gb|EER12788.1| hypothetical protein Pmar_PMAR018043 [Perkinsus marinus ATCC 50983]
          Length = 527

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 52/192 (27%), Gaps = 7/192 (3%)

Query: 9   PSALLL-FSGGQDSSTCLSWALD----RFDRVETLSFDYGQR--NKVELECRLCVRKKIV 61
           P  L+L  SGG DS T L            ++      +  R     EL+    V  ++ 
Sbjct: 63  PKVLVLSLSGGVDSMTHLYLLSKLQQPLGFKLVACHIRHSNRDDAIQELQWVTYVTARLG 122

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
             +      L   H      +  + +   T+++   +        +              
Sbjct: 123 VPLYHHHVKLRRPHGSLKTGISRMDYEKQTRDIRFSMYAKAHKLAWAAAGLPEEERTQPV 182

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           +     + ++          G     +  +   E   +  +     V   L+  +K E  
Sbjct: 183 VVVGHHMDDVDENRLAELGKGNLLNINGMVINAEGDGDDEIGGVCQVRPLLLSTRKEELI 242

Query: 182 KLAQDIGGQDLV 193
             A       +V
Sbjct: 243 ACAARHNIPYMV 254


>gi|261400234|ref|ZP_05986359.1| tRNA(Ile)-lysidine synthase [Neisseria lactamica ATCC 23970]
 gi|269210035|gb|EEZ76490.1| tRNA(Ile)-lysidine synthase [Neisseria lactamica ATCC 23970]
          Length = 411

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/190 (11%), Positives = 43/190 (22%), Gaps = 31/190 (16%)

Query: 15  FSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            SGG DS   L   +    +     E +   +G                           
Sbjct: 3   LSGGLDSVVLLHLLVRAGKKGGFIPEAVHIHHG-----LSPRADDWADFCQNYCDMLGVR 57

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           L    +        I  ++  K  A   +           R+     F   +A   G+  
Sbjct: 58  LETVKVCVEKNGLGIEAAARQKRYAAFAEKGFDVLALAHHRDDQIETFMLAVARGGGLRA 117

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +                                    +  PL+   + + W  AQ  G  
Sbjct: 118 LAAMPAVRPLGENGI----------------------IWRPLLPFSRQDIWDYAQKHGLP 155

Query: 191 DLVNLILEES 200
           ++ +    ++
Sbjct: 156 NIEDESNTDT 165


>gi|218262620|ref|ZP_03477008.1| hypothetical protein PRABACTJOHN_02687 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223269|gb|EEC95919.1| hypothetical protein PRABACTJOHN_02687 [Parabacteroides johnsonii
           DSM 18315]
          Length = 506

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 55/187 (29%), Gaps = 21/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D+G   K E E  L   + +       
Sbjct: 213 DKVILALSGGVDSSVTAVLLHKAIGKNLTCIFVDHGLLRKNEFENVLKDYEHLG------ 266

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      L ++G  +     K +A   +          G   +   F         
Sbjct: 267 -----------LNVIGVDAKEKFYKELAGVSEPEKKRKIIGKGFIDV---FDEEAHKLKD 312

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           I++      L  + ++ +  PL  L K E  ++  ++
Sbjct: 313 IKWLGQGTIYPDVIESLSITGTVIKSHHNVGGLPAKMNLKLVEPLRLLFKDEVRRVGMEL 372

Query: 188 GGQDLVN 194
           G Q  + 
Sbjct: 373 GMQPHLI 379


>gi|182682123|ref|YP_001830283.1| tRNA(Ile)-lysidine synthetase [Xylella fastidiosa M23]
 gi|182632233|gb|ACB93009.1| tRNA(Ile)-lysidine synthetase [Xylella fastidiosa M23]
 gi|307578388|gb|ADN62357.1| cell cycle protein [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 435

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 42/159 (26%), Gaps = 7/159 (4%)

Query: 11  ALLLFSGGQDSSTCLSWAL----DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            L+ FSGG DS+  L         R   +E +   +G     +     C           
Sbjct: 15  VLVAFSGGLDSTVLLHCLASQPTQRIHGLEAIHIHHGLNENADAWTAHCAA---FCTQHD 71

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +  +   H+   +  G  + +   +  A      +     +              A R 
Sbjct: 72  IRLHIARVHVSHNSGQGLEAAARTARRAAFAHTLQHGHYLALAHHCDDQAETWLLRALRG 131

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH 165
               +      T ++     R     +    ++   + H
Sbjct: 132 SCDGLAAMRPLTPFAAGHLWRPLLTHSRAQLLDYAQQQH 170


>gi|157737167|ref|YP_001489850.1| GMP synthase [Arcobacter butzleri RM4018]
 gi|226738379|sp|A8ETA7|GUAA_ARCB4 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|157699021|gb|ABV67181.1| GMP synthase [Arcobacter butzleri RM4018]
          Length = 511

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 51/188 (27%), Gaps = 19/188 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS   +   +   ++V  +  D G     E E    + K        
Sbjct: 215 NKKVLCAVSGGVDSSVVATLLAEAIGEQVIPVFVDNGLLRANEREQVETMFKSRGVN--- 271

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     L      +   S L      + +   +  TF+   ++     +       
Sbjct: 272 ----------LITVDASETFLSKLAGVTDPEKKRKIIGETFIEVFDVEAKKHSGIEFLAQ 321

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G         +   S        TI++      L       +  PL  + K E   L  +
Sbjct: 322 G-----TLYTDVIESVSVKGPSKTIKSHHNVGGLPDWMKFELIEPLREIFKDEVRALGLE 376

Query: 187 IGGQDLVN 194
           +G    + 
Sbjct: 377 LGLPKSMI 384


>gi|154493620|ref|ZP_02032940.1| hypothetical protein PARMER_02960 [Parabacteroides merdae ATCC
           43184]
 gi|154086830|gb|EDN85875.1| hypothetical protein PARMER_02960 [Parabacteroides merdae ATCC
           43184]
          Length = 506

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 55/187 (29%), Gaps = 21/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D+G   K E E  L   + +       
Sbjct: 213 DKVILALSGGVDSSVTAVLLHKAIGKNLTCIFVDHGLLRKNEFENVLKDYEHLG------ 266

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      L ++G  +     K +A   +          G   +   F         
Sbjct: 267 -----------LNVIGVDAKEKFYKELAGVSEPEKKRKIIGKGFIDV---FDEEAHKLKD 312

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           I++      L  + ++ +  PL  L K E  ++  ++
Sbjct: 313 IKWLGQGTIYPDVIESLSITGTVIKSHHNVGGLPAKMNLKLVEPLRLLFKDEVRRVGMEL 372

Query: 188 GGQDLVN 194
           G Q  + 
Sbjct: 373 GMQPHLI 379


>gi|148643144|ref|YP_001273657.1| argininosuccinate synthase [Methanobrevibacter smithii ATCC 35061]
 gi|261350059|ref|ZP_05975476.1| argininosuccinate synthase [Methanobrevibacter smithii DSM 2374]
 gi|148552161|gb|ABQ87289.1| argininosuccinate synthase, ArgG [Methanobrevibacter smithii ATCC
           35061]
 gi|288860845|gb|EFC93143.1| argininosuccinate synthase [Methanobrevibacter smithii DSM 2374]
          Length = 391

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 55/191 (28%), Gaps = 23/191 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L FSGG D+S C+    +++D  V T   D GQ ++ E+     + K+I       
Sbjct: 2   DKVVLAFSGGLDTSVCVKLLEEKYDVEVITACVDVGQGDE-EIAKAEKMAKEIGGY---- 56

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                + + +      +   +           +             +       +A + G
Sbjct: 57  -----KHYTID---AKEEFANEYIARGIKANAEYEGYPLSTALARPLIAQKIIDIAKKEG 108

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            T I  G        +         +    I              + L + E    A + 
Sbjct: 109 ATAIAHGCTGKGNDQFRFEAVILAMSDLDIIA---------PIRELNLTRTEEQAYAAEK 159

Query: 188 GGQDLVNLILE 198
           G +   + I  
Sbjct: 160 GIKLNSDKIYS 170


>gi|126661864|ref|ZP_01732863.1| GMP synthetase (glutamine-hydrolyzing) [Flavobacteria bacterium
           BAL38]
 gi|126625243|gb|EAZ95932.1| GMP synthetase (glutamine-hydrolyzing) [Flavobacteria bacterium
           BAL38]
          Length = 510

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 54/187 (28%), Gaps = 18/187 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DS+           + +  +  + G   K E +  L   K +   +  
Sbjct: 213 NDKVVLGLSGGVDSTVAAVLLNKAIGENLYCIFVNNGLLRKNEFQNVLDQYKGMGLNVKG 272

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              S         A+ G     +  K +     +                         L
Sbjct: 273 VDASA----RFLDALAGLDDPEAKRKAIGKAFIEVFDDEAHQLTDVKW-----------L 317

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   I   V E+  +        TI++      L     + V  PL  L K E  ++ + 
Sbjct: 318 GQGTIYPDVIESVSATG--GPSATIKSHHNVGGLPDFMKLQVVEPLRMLFKDEVRRVGRS 375

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 376 LGIDDEL 382


>gi|134046543|ref|YP_001098028.1| hypothetical protein MmarC5_1517 [Methanococcus maripaludis C5]
 gi|132664168|gb|ABO35814.1| conserved hypothetical protein [Methanococcus maripaludis C5]
          Length = 195

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 29/73 (39%), Gaps = 4/73 (5%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG----QRNKVELECRLCVRKKIVELMP 65
           A +LFSGG+DSS       +    ++ ++ ++G      +  E    +    K+  +  
Sbjct: 2  KAHVLFSGGKDSSLSAIILHNLGYEIQLVTVNFGVLDSYLHAEETAKIIGYSHKVELIDK 61

Query: 66 KWKDSLGEDHILP 78
          +  +   +  +  
Sbjct: 62 ELIEKSVDMILKD 74


>gi|41615306|ref|NP_963804.1| hypothetical protein NEQ525 [Nanoarchaeum equitans Kin4-M]
 gi|40069030|gb|AAR39365.1| NEQ525 [Nanoarchaeum equitans Kin4-M]
          Length = 352

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 33/97 (34%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++ FSGG+DS+T    A       + +  D G   K  LE    + KKI  +   +    
Sbjct: 180 VIPFSGGKDSTTVAILAKKAKVDFDLVFVDTGLEFKQTLEYIDYISKKIKPINIVYAGID 239

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFV 108
            +  +     L     +            NN  N  +
Sbjct: 240 KKYKMFGFDYLKRRLCTKDKITTLYNYVRNNYENPVL 276


>gi|332882932|ref|ZP_08450539.1| GMP synthase domain protein [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332679140|gb|EGJ52130.1| GMP synthase domain protein [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 507

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 57/187 (30%), Gaps = 21/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D+G   K E             ++  +
Sbjct: 214 DRVILGLSGGVDSSVAAVLLNKAIGKNLTCIFVDHGMLRKNE----------FKNVLHDY 263

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +        +  +         +T     +          + GR+ + +  A        
Sbjct: 264 ECLGLNVIGVDASAKFFKDLEGVTDPEQKRK---------IIGRDFVEVFDAEARKIT-D 313

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +  G    D     +    TI++      L  E H+ +  PL WL K E  ++ + +
Sbjct: 314 AKWLAQGTIYPDRIESLNITGKTIKSHHNVGGLPEEMHLQLCEPLKWLFKDEVRRVGRQM 373

Query: 188 GGQDLVN 194
           G  + + 
Sbjct: 374 GMPEHLI 380


>gi|296388914|ref|ZP_06878389.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas aeruginosa PAb1]
 gi|313107663|ref|ZP_07793846.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudomonas aeruginosa 39016]
 gi|310880348|gb|EFQ38942.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Pseudomonas aeruginosa 39016]
          Length = 363

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 47/182 (25%), Gaps = 10/182 (5%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++  SGG DSS      L +  +VE L       +     C    R+ + +         
Sbjct: 2   IVGMSGGVDSSVSALLLLQQGYQVEGLFMKNWDEDDGTEYC--TAREDLADAQAVCDRIG 59

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
            + H        +   +     +A            +  R  I        A  LG   I
Sbjct: 60  IKLHT--ANFAAEYWDNVFEHFLAEYKAGRTPNPDILCNRE-IKFKAFLDYALMLGADLI 116

Query: 132 VIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
             G                              +G E       P+  L+K E   +A+ 
Sbjct: 117 ATGHYVRRRDRDGRTELLKGLDPNKDQSYFLHAVGGEQIARSLFPVGELEKPEVRAIAEK 176

Query: 187 IG 188
            G
Sbjct: 177 HG 178


>gi|167855993|ref|ZP_02478739.1| argininosuccinate synthase [Haemophilus parasuis 29755]
 gi|219871168|ref|YP_002475543.1| argininosuccinate synthase [Haemophilus parasuis SH0165]
 gi|167852875|gb|EDS24143.1| argininosuccinate synthase [Haemophilus parasuis 29755]
 gi|219691372|gb|ACL32595.1| argininosuccinate synthase [Haemophilus parasuis SH0165]
          Length = 443

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 17 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYNAIPRKAMEYGAENARLID 73


>gi|118588086|ref|ZP_01545496.1| NAD synthetase [Stappia aggregata IAM 12614]
 gi|118439708|gb|EAV46339.1| NAD synthetase [Stappia aggregata IAM 12614]
          Length = 555

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/145 (13%), Positives = 40/145 (27%), Gaps = 4/145 (2%)

Query: 12  LLL-FSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           ++L  SGG DS+ C + A+D    D+V  +   Y   ++  +       K +        
Sbjct: 290 VVLGLSGGIDSAICAAMAVDALGADKVHAIMLPYRYTSEESITDAAACAKALGIRYDTVP 349

Query: 69  DS-LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            S   E     L+ L   +    T+          +          + +         +G
Sbjct: 350 ISEPVEGFRSALSNLFAGTKEDTTEENLQSRARGVILMAVSNKFGHMVMTTGNKSEMSVG 409

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIR 152
              +   +           +     
Sbjct: 410 YATLYGDMNGGYNPIKDLYKTQVYH 434


>gi|78048041|ref|YP_364216.1| GMP synthase [Xanthomonas campestris pv. vesicatoria str. 85-10]
 gi|91206839|sp|Q3BSP7|GUAA_XANC5 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|78036471|emb|CAJ24162.1| glutamine amidotransferase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 521

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 49/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D G     E +              +   
Sbjct: 226 VILGLSGGVDSSVVAALLHKAIGDKLTCVFVDTGLLRWQEGD--------------QVMA 271

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E   + +  +                +        +              A  L   
Sbjct: 272 MFAEHMGVKVIRVNAADRYFAKLEGVSDPEAKRKIIGNLFVEIFDEESNKLANAKWLAQG 331

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S     +   I++      L     + +  PL  L K E  +L  ++G 
Sbjct: 332 TIYPDVIESAGS--KTGKAHVIKSHHNVGGLPEHMKLGLVEPLRELFKDEVRRLGVELGL 389

Query: 190 Q 190
            
Sbjct: 390 P 390


>gi|327182788|gb|AEA31235.1| GMP synthase [Lactobacillus amylovorus GRL 1118]
          Length = 516

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 57/186 (30%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS   +       +++  +  D+G   K E +    V K + + +   
Sbjct: 222 KKVILGLSGGVDSSVTATLLHKAIGNQLTAIFVDHGMLRKDEGD---QVMKALNKDLGVN 278

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       L  L  ++     + +  K             +++ FL         + 
Sbjct: 279 IIRVNAQKRF-LDKLKGVTDPEKKRKIIGKEFIEVFNEEAKKIKDVDFLAQGTLYTDVIE 337

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                                 TI++      L  + H  +  PL  L K E  +L + +
Sbjct: 338 ---------------SGTNTAQTIKSHHNVGGLPKDMHFKLIEPLRKLFKDEVRELGEKL 382

Query: 188 GGQDLV 193
           G    +
Sbjct: 383 GIPHDL 388


>gi|325955953|ref|YP_004286563.1| GMP synthase [Lactobacillus acidophilus 30SC]
 gi|325332518|gb|ADZ06426.1| GMP synthase [Lactobacillus acidophilus 30SC]
          Length = 511

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 57/186 (30%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS   +       +++  +  D+G   K E +    V K + + +   
Sbjct: 222 KKVILGLSGGVDSSVTATLLHKAIGNQLTAIFVDHGMLRKDEGD---QVMKALNKDLGVN 278

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       L  L  ++     + +  K             +++ FL         + 
Sbjct: 279 IIRVNAQKRF-LDKLKGVTDPEKKRKIIGKEFIEVFNEEAKKIKDVDFLAQGTLYTDVIE 337

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                                 TI++      L  + H  +  PL  L K E  +L + +
Sbjct: 338 ---------------SGTNTAQTIKSHHNVGGLPKDMHFKLIEPLRKLFKDEVRELGEKL 382

Query: 188 GGQDLV 193
           G    +
Sbjct: 383 GIPHDL 388


>gi|319936822|ref|ZP_08011234.1| argininosuccinate synthase [Coprobacillus sp. 29_1]
 gi|319808090|gb|EFW04662.1| argininosuccinate synthase [Coprobacillus sp. 29_1]
          Length = 406

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 6  KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVR 57
          K+    +L +SGG D+S  +SW  +     V  ++ D GQ +++E      + 
Sbjct: 4  KQYKKVVLAYSGGLDTSIIISWLKENYGCEVIAVAGDVGQADELEGLEAKALA 56


>gi|315037493|ref|YP_004031061.1| GMP synthase [Lactobacillus amylovorus GRL 1112]
 gi|312275626|gb|ADQ58266.1| GMP synthase [Lactobacillus amylovorus GRL 1112]
          Length = 516

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 57/186 (30%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS   +       +++  +  D+G   K E +    V K + + +   
Sbjct: 222 KKVILGLSGGVDSSVTATLLHKAIGNQLTAIFVDHGMLRKDEGD---QVMKALNKDLGVN 278

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       L  L  ++     + +  K             +++ FL         + 
Sbjct: 279 IIRVNAQKRF-LDKLKGVTDPEKKRKIIGKEFIEVFNEEAKKIKDVDFLAQGTLYTDVIE 337

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                                 TI++      L  + H  +  PL  L K E  +L + +
Sbjct: 338 ---------------SGTNTAQTIKSHHNVGGLPKDMHFKLIEPLRKLFKDEVRELGEKL 382

Query: 188 GGQDLV 193
           G    +
Sbjct: 383 GIPHDL 388


>gi|256425508|ref|YP_003126161.1| argininosuccinate synthase [Chitinophaga pinensis DSM 2588]
 gi|256040416|gb|ACU63960.1| argininosuccinate synthase [Chitinophaga pinensis DSM 2588]
          Length = 399

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 46/176 (26%), Gaps = 12/176 (6%)

Query: 9   PSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L FSGG D S        D+   V ++  + G  +  EL+        +     K 
Sbjct: 2   KKVVLGFSGGLDTSYCVKYLTDDKGYEVHSVIVNTGGFSAEELQEIERRAYSLGVKSHKT 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      +  +     S++   V   +  NN     V    +   +  A     +G
Sbjct: 62  -----------VDAIRSYYDSAIKYLVFGNVLKNNTYPLSVSAERVTQALAIAEHVKAVG 110

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              +  G                I      I   +          +   K +  ++
Sbjct: 111 ADAVAHGSTGAGNDQVRFDMIFHIMIPGVEIITPIRDLKLSREEEIEYLKAKGVEM 166


>gi|261367050|ref|ZP_05979933.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Subdoligranulum variabile DSM 15176]
 gi|282571170|gb|EFB76705.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Subdoligranulum variabile DSM 15176]
          Length = 348

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/178 (13%), Positives = 46/178 (25%), Gaps = 7/178 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DSS  +    ++   V+     +   +   +       K +   +     
Sbjct: 12  KVLMGMSGGVDSSVAVRILQEQGFAVQGAVIRFSPAHDGAVSAAQESAKTLQIPLHIIDA 71

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
               +  + L                       L N  V  R +          +     
Sbjct: 72  RDAFEQHVILPFCESYCAGMTPNP-------CILCNPLVKFRLLAEKANELGCQFIATGH 124

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              + V     S     +            L  E    +  PL   +K +  ++A+DI
Sbjct: 125 YARVEVDHKGVSRIAVPQSTARDQSYMLYRLPQEILSKLILPLGEFEKDDIREMARDI 182


>gi|56123295|gb|AAV74532.1| WbuX [Escherichia coli]
 gi|62002552|gb|AAX58764.1| WbeC [Escherichia coli]
          Length = 380

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 48/190 (25%), Gaps = 8/190 (4%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            ++  SGG DSS     A ++   R      D G      +     + + +   +     
Sbjct: 71  CIIGLSGGLDSSYAAYIAKEKMGLRPLLFHVDAGWNTDQAVGNIEKLIEGLGLELYTEVV 130

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +  E   L L+ L      S   +  +    +   + +   R            +     
Sbjct: 131 NWEEMKDLQLSFLK-----SGIPDQDLVQDASFFSSLYKFARQHRIKHVITGSNFSTECC 185

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                     Y G      + I        L     V +    ++ +K    K+   +  
Sbjct: 186 REPEEW--GGYLGIDTLLFNDIHTKFGEKPLKTFPLVDILVYKIYYQKILGMKVHHPLNL 243

Query: 190 QDLVNLILEE 199
                   E 
Sbjct: 244 VPFNKKDAEN 253


>gi|23098171|ref|NP_691637.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Oceanobacillus iheyensis HTE831]
 gi|44887959|sp|Q8CXK8|GUAA_OCEIH RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|22776396|dbj|BAC12672.1| GMP synthase (glutamine-hydrolyzing) [Oceanobacillus iheyensis
           HTE831]
          Length = 511

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 52/185 (28%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS   +       D++  +  D+G   K E +        +      ++
Sbjct: 218 KVLCALSGGVDSSVVAALIHKAIGDQLTCIFVDHGLLRKNEGD------DVMKVFAEDFQ 271

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            ++ +       +      S       +   +                           I
Sbjct: 272 MNIIKVDAKDRFLFKLEGVSDPELKRKIIGNEFIYVFDDEAS-------------KLKDI 318

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G   TD          TI++      L  +   T+  PL  L K E  +L   +G
Sbjct: 319 DFLAQGTLYTDVIESGTDTAQTIKSHHNVGGLPEDMQFTLIEPLNTLFKDEVRELGSQLG 378

Query: 189 GQDLV 193
             D +
Sbjct: 379 VPDRI 383


>gi|325918148|ref|ZP_08180300.1| argininosuccinate synthase [Xanthomonas vesicatoria ATCC 35937]
 gi|325535623|gb|EGD07467.1| argininosuccinate synthase [Xanthomonas vesicatoria ATCC 35937]
          Length = 397

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 25/59 (42%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
          +   +L FSGG D+S C+ +  +R   V T+  D G  +  E +       ++      
Sbjct: 3  SKDIVLAFSGGLDTSFCIPYLQERGYAVHTVFADTGGVDAEERDFIEKRASELGAASHV 61


>gi|317402713|gb|EFV83261.1| argininosuccinate synthase [Achromobacter xylosoxidans C54]
          Length = 446

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W  +        + + GQ ++ + +              +  D
Sbjct: 16 IAFSGGLDTSAALLWMRNNGAIPYAYTANLGQPDESDYDEIPRKAMAYGAENARLID 72


>gi|309363500|emb|CAP26308.2| hypothetical protein CBG_06062 [Caenorhabditis briggsae AF16]
          Length = 393

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 16/46 (34%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
          K P  ++  SGG DS+        +   V  L      R +   + 
Sbjct: 2  KVPRVVIGMSGGVDSAVSAFLLKQKGFDVVGLHMVTHSRQRESEKK 47


>gi|302330131|gb|ADL20325.1| bifunctional GMP synthase [Corynebacterium pseudotuberculosis 1002]
          Length = 526

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 59/193 (30%), Gaps = 12/193 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
            + +     A+   SGG DS+   +       DR+  +  D+G     E E         
Sbjct: 216 REQVGPEGRAICGLSGGVDSAVAGALVQRAIGDRLTCVFVDHGLLRAGERE--------- 266

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++   +  S G   +        ++  +   +   K +           R +  ++ +A
Sbjct: 267 -QVEKDFVASTGAKLVTVDERAAFLNKLAGVTDPEAKRKAIGAEFIRSFERAVAGVLESA 325

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
                +    +   +               I++      L  +    +  PL  L K E 
Sbjct: 326 PEGSSVD-FLVQGTLYPDVVESGGGAGTANIKSHHNVGGLPDDVEFKLVEPLRLLFKDEV 384

Query: 181 WKLAQDIGGQDLV 193
             + +++G  + +
Sbjct: 385 RAVGRELGLPEEI 397


>gi|300857847|ref|YP_003782830.1| GMP synthase [Corynebacterium pseudotuberculosis FRC41]
 gi|300685301|gb|ADK28223.1| GMP synthase [Corynebacterium pseudotuberculosis FRC41]
 gi|302205577|gb|ADL09919.1| bifunctional GMP synthase [Corynebacterium pseudotuberculosis C231]
 gi|308275812|gb|ADO25711.1| bifunctional GMP synthase [Corynebacterium pseudotuberculosis I19]
          Length = 525

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 59/193 (30%), Gaps = 12/193 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
            + +     A+   SGG DS+   +       DR+  +  D+G     E E         
Sbjct: 215 REQVGPEGRAICGLSGGVDSAVAGALVQRAIGDRLTCVFVDHGLLRAGERE--------- 265

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++   +  S G   +        ++  +   +   K +           R +  ++ +A
Sbjct: 266 -QVEKDFVASTGAKLVTVDERAAFLNKLAGVTDPEAKRKAIGAEFIRSFERAVAGVLESA 324

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
                +    +   +               I++      L  +    +  PL  L K E 
Sbjct: 325 PEGSSVD-FLVQGTLYPDVVESGGGAGTANIKSHHNVGGLPDDVEFKLVEPLRLLFKDEV 383

Query: 181 WKLAQDIGGQDLV 193
             + +++G  + +
Sbjct: 384 RAVGRELGLPEEI 396


>gi|213581725|ref|ZP_03363551.1| argininosuccinate synthase [Salmonella enterica subsp. enterica
          serovar Typhi str. E98-0664]
          Length = 291

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDTIPRRAMEYGAENARLID 72


>gi|229917403|ref|YP_002886049.1| tRNA(Ile)-lysidine synthetase [Exiguobacterium sp. AT1b]
 gi|229468832|gb|ACQ70604.1| tRNA(Ile)-lysidine synthetase [Exiguobacterium sp. AT1b]
          Length = 408

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 16/43 (37%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE 51
             L+  SGG DS   L   + +   V      +G R   + E
Sbjct: 2  KKVLVAVSGGVDSIVLLDRLVKQGWDVGVAHVHHGLREASDEE 44


>gi|166712367|ref|ZP_02243574.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 521

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 49/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D G     E +              +   
Sbjct: 226 VILGLSGGVDSSVVAALLHKAIGDKLTCVFVDTGLLRWQEGD--------------QVMA 271

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E   + +  +                +        +              A  L   
Sbjct: 272 MFAEHMGVKVIRVNAADRYFAKLEGVSDPEAKRKIIGNLFVEIFDEESNTLANAKWLAQG 331

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S     +   I++      L     + +  PL  L K E  +L  ++G 
Sbjct: 332 TIYPDVIESAGS--KTGKAHVIKSHHNVGGLPEHMTLGLVEPLRELFKDEVRRLGVELGL 389

Query: 190 Q 190
            
Sbjct: 390 P 390


>gi|119361314|sp|Q2RMV0|ASSY_RHORT RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
          Length = 404

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 55/159 (34%), Gaps = 9/159 (5%)

Query: 5   IKKA--PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIV 61
           +KK      +L +SGG D+S  L W  D +   V T + D GQ  ++E       + +++
Sbjct: 1   MKKGDVKKVVLAYSGGLDTSIILRWLQDEYDCEVVTFTADIGQGEELEP---ARQKAEMM 57

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
            +   + + L E+ +            + T    + +   ++    +  R +        
Sbjct: 58  GIKEIYIEDLREEFVRDYVF---PMFRANTLYEGVYLLGTSIARPLIGKRLVEIAEATGA 114

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
            A   G T         + + Y       I A     +L
Sbjct: 115 DAVSHGATGKGNDQVRFELTAYALKPDIKIIAPWRTWDL 153


>gi|116515102|ref|YP_802731.1| hypothetical protein BCc_166 [Buchnera aphidicola str. Cc (Cinara
          cedri)]
 gi|122285502|sp|Q057R1|MNMA_BUCCC RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|116256956|gb|ABJ90638.1| tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase
          [Buchnera aphidicola str. Cc (Cinara cedri)]
          Length = 373

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 21/66 (31%), Gaps = 2/66 (3%)

Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
           SGG DSS      L +  +VE L       +     C   +     ++    K      
Sbjct: 14 MSGGVDSSVSAWLLLKQGYQVEGLFMKNWDEDDSNDYCSSKI--DFNDVKKVCKTLNIPL 71

Query: 75 HILPLA 80
          H +  +
Sbjct: 72 HTINFS 77


>gi|83595080|ref|YP_428832.1| argininosuccinate synthase [Rhodospirillum rubrum ATCC 11170]
 gi|83577994|gb|ABC24545.1| argininosuccinate synthase [Rhodospirillum rubrum ATCC 11170]
          Length = 419

 Score = 45.3 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 55/159 (34%), Gaps = 9/159 (5%)

Query: 5   IKKA--PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIV 61
           +KK      +L +SGG D+S  L W  D +   V T + D GQ  ++E       + +++
Sbjct: 16  MKKGDVKKVVLAYSGGLDTSIILRWLQDEYDCEVVTFTADIGQGEELEP---ARQKAEMM 72

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
            +   + + L E+ +            + T    + +   ++    +  R +        
Sbjct: 73  GIKEIYIEDLREEFVRDYVF---PMFRANTLYEGVYLLGTSIARPLIGKRLVEIAEATGA 129

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
            A   G T         + + Y       I A     +L
Sbjct: 130 DAVSHGATGKGNDQVRFELTAYALKPDIKIIAPWRTWDL 168


>gi|332827933|gb|EGK00655.1| tRNA-specific 2-thiouridylase mnmA [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 358

 Score = 44.9 bits (104), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 54/190 (28%), Gaps = 6/190 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
               L SGG DSS  +    ++           G   + E     C  ++ +E+      
Sbjct: 2   KIAALVSGGVDSSVVVHQLKEQGYDPTIFYIRIGM--EDEQGYIDCPAEEDIEITTYIAK 59

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G    + +++  +   + ++  V    +        +  + I F  F     +     
Sbjct: 60  KYGCKMEV-VSLHEEYWENVVSYTVDAVKRGLTPNPDMMCNKMIKFGCFEQKWGHEFDKI 118

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLAQD 186
                   T+ +G            +    LG   ++ V     P+  L K E   +A  
Sbjct: 119 ATGHYATTTELNGKTWLSTAKDHVKDQTYFLGQIDYLQVSKLMFPIGDLLKSEVRAIAAQ 178

Query: 187 IGGQDLVNLI 196
            G        
Sbjct: 179 QGLPSAQRKD 188


>gi|227891841|ref|ZP_04009646.1| argininosuccinate synthase [Lactobacillus salivarius ATCC 11741]
 gi|227866304|gb|EEJ73725.1| argininosuccinate synthase [Lactobacillus salivarius ATCC 11741]
          Length = 409

 Score = 44.9 bits (104), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/178 (13%), Positives = 47/178 (26%), Gaps = 14/178 (7%)

Query: 1   MNDIIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           M   I       +L +SGG D+S  ++W  ++   V     D G     E +    +++K
Sbjct: 1   MKRGIYMEKEKVVLAYSGGLDTSVEIAWLKNKGYDVIACCIDVG-----EGKDLEAIKEK 55

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                      +G    + +    + +   +   +       N           + +   
Sbjct: 56  --------GLKVGAVESIVIDAKHEFAEEYVLPALQGHAYYENKYPLVSALSRPLIVKKL 107

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
             +A   G T I  G                    E  I   +          +   K
Sbjct: 108 VEVAKEHGATAIAHGCTGKGNDQVRFEVGIHALVPEMKIEDPIRDLHWSREEEIEYAK 165


>gi|225849954|ref|YP_002730188.1| tRNA(Ile)-lysidine synthase [Persephonella marina EX-H1]
 gi|254789038|sp|C0QU23|TILS_PERMH RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|225646259|gb|ACO04445.1| tRNA(Ile)-lysidine synthase [Persephonella marina EX-H1]
          Length = 452

 Score = 44.9 bits (104), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/182 (9%), Positives = 48/182 (26%), Gaps = 10/182 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALD-----RFDRVETLSFDYGQRNKVELECRLCVRK 58
           +I +    L+ FSGG DS+      +      +   +     ++  R + + + R C   
Sbjct: 15  LISEGDRILVAFSGGIDSTVLTYLLIKFRDHLKISDIYLAHLNHSLRKESDEDQRFC--- 71

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
              +   K+   +    +   ++      S   K    +               +     
Sbjct: 72  --EDFAKKYGLEIFTKKVDIKSLAEKEKKSIEQKAREERYSFFRKVMEERSINRLATGHH 129

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
            + L   + +  I             +        +     +   +        + +  +
Sbjct: 130 LSDLVETMIMWFIQGNRKGIKGFRPKERDIIRPLYLINKDQIENYAREKGIEYRIDITNF 189

Query: 179 ET 180
           ET
Sbjct: 190 ET 191


>gi|229814917|ref|ZP_04445255.1| hypothetical protein COLINT_01960 [Collinsella intestinalis DSM
           13280]
 gi|229809404|gb|EEP45168.1| hypothetical protein COLINT_01960 [Collinsella intestinalis DSM
           13280]
          Length = 409

 Score = 44.9 bits (104), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/134 (8%), Positives = 28/134 (20%), Gaps = 6/134 (4%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               L+  SGG DSS        +       +      +               +     
Sbjct: 3   RKRVLVAMSGGVDSSVTAYLLTQQGYDCLGATM---LLHGDAAPGACGSGSDADDAAAIC 59

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                   ++    + +     + +      +    PN  +     +      + A    
Sbjct: 60  ARLGFPHEVID---MRETFERHVVEKFVRTYETGRTPNPCIDCNRHLKFDALLSYAREHD 116

Query: 128 ITNIVIGVCETDYS 141
              I  G      +
Sbjct: 117 CDFIATGHYGRIGT 130


>gi|206901533|ref|YP_002251489.1| argininosuccinate synthase [Dictyoglomus thermophilum H-6-12]
 gi|254807520|sp|B5YAL9|ASSY_DICT6 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|206740636|gb|ACI19694.1| argininosuccinate synthase [Dictyoglomus thermophilum H-6-12]
          Length = 397

 Score = 44.9 bits (104), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQ 44
          K    +L +SGG D+S  + W + ++   V TL+ D GQ
Sbjct: 2  KKEKVVLAYSGGLDTSVAIKWLMQKYSLDVITLTVDIGQ 40


>gi|149375102|ref|ZP_01892874.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Marinobacter algicola DG893]
 gi|149360466|gb|EDM48918.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Marinobacter algicola DG893]
          Length = 525

 Score = 44.9 bits (104), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 54/185 (29%), Gaps = 19/185 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMP 65
           +   LL  SGG DSS   +       D++  +  D G  R     +        +   + 
Sbjct: 227 SGKVLLGLSGGVDSSVTAALLHKAIGDQLTCVFVDNGLLRLNEGDQVMDMFASNMGVKVI 286

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +          L L+ L  I      + +      +   +     R++ +L         
Sbjct: 287 RVDAED-----LFLSKLKGIDDPEKKRKIIGNTFIDVFDDEAANIRDVNWLAQGTIY--- 338

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                        + +     +   I++      L     + +  PL  L K E  ++  
Sbjct: 339 ---------PDVIESAASKTGKAHVIKSHHNVGGLPETMKMKLVEPLRELFKDEVRRIGL 389

Query: 186 DIGGQ 190
           ++G  
Sbjct: 390 ELGLP 394


>gi|150398257|ref|YP_001328724.1| argininosuccinate synthase [Sinorhizobium medicae WSM419]
 gi|166221022|sp|A6UE09|ASSY_SINMW RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|150029772|gb|ABR61889.1| Argininosuccinate synthase [Sinorhizobium medicae WSM419]
          Length = 405

 Score = 44.9 bits (104), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 31/78 (39%), Gaps = 6/78 (7%)

Query: 6  KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV--- 61
          K     +L +SGG D+S  L W        V T + D GQ  ++E        + +    
Sbjct: 5  KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEP--ARKKAEMLGIKE 62

Query: 62 ELMPKWKDSLGEDHILPL 79
            +   ++   +D + P+
Sbjct: 63 IYIEDVREEFVKDFVFPM 80


>gi|83591106|ref|YP_431115.1| argininosuccinate synthase [Moorella thermoacetica ATCC 39073]
 gi|119361293|sp|Q2RG67|ASSY_MOOTA RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|83574020|gb|ABC20572.1| argininosuccinate synthase [Moorella thermoacetica ATCC 39073]
          Length = 408

 Score = 44.9 bits (104), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVR 57
          M  +   A   +L +SGG D+S  + W  +     V  ++ D GQ  ++E      ++
Sbjct: 1  MKGVFTVAEKVVLAYSGGLDTSIIIPWLKETYGYEVIAVAVDVGQGEELEPLEEKAIK 58


>gi|61657492|emb|CAI44404.1| hypothetical protein [Thermotoga sp. KOL6]
          Length = 304

 Score = 44.9 bits (104), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 59/201 (29%), Gaps = 18/201 (8%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
            + KK    L+  SGG+DS +           V+ L    G+     ++    + +K  E
Sbjct: 42  RMFKKDSKILIAVSGGKDSVSLWHILKKLGYDVDALFIRAGK--SAMVQKAQEIVEKNAE 99

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           ++        + H++          +     ++ +     L         ++        
Sbjct: 100 ILN------TKLHVVD--------ATQYFDGLSTQEISIILRRPVCSICGVVRRYLMNKF 145

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           AY  G   +V G    D +          +  E  +          H  L+   K   + 
Sbjct: 146 AYENGYDVVVTGHNLNDEASVLLGNILHWQ--EGYLERQWPLLPKTHEKLVPKAKPLVFN 203

Query: 183 LAQDIGGQDLVNLILEESHTC 203
             +DI     +N I      C
Sbjct: 204 YEEDIKLYAKLNEIPHLEMAC 224


>gi|15805701|ref|NP_294397.1| argininosuccinate synthase [Deinococcus radiodurans R1]
 gi|24211538|sp|Q9RWJ4|ASSY_DEIRA RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|6458375|gb|AAF10250.1|AE001924_3 arginosuccinate synthase [Deinococcus radiodurans R1]
          Length = 402

 Score = 44.9 bits (104), Expect = 0.008,   Method: Composition-based stats.
 Identities = 23/197 (11%), Positives = 51/197 (25%), Gaps = 5/197 (2%)

Query: 8   APSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCV-RKKIVELMP 65
               +L +SGG D+S  L W   +R   V   + D GQ ++VE      +    +     
Sbjct: 3   KEKIVLAYSGGLDTSIILKWLQTERNYDVVCFTADLGQGDEVEEARVKALNTGAVAAYAL 62

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             ++    D++ P+     +         ++           +  +     +        
Sbjct: 63  DLREEFVRDYVFPMMRSSALYEGYYLLGTSIARPLIAKKMVEIAEKEGAVAISHGATGKG 122

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                  +                       A          +    +   K + W +  
Sbjct: 123 NDQVRFEMSAYALKPDIVTVAPWRDWDFQGRADLEAFAREHGI---PVPTTKKDPWSMDA 179

Query: 186 DIGGQDLVNLILEESHT 202
           ++         LE+  T
Sbjct: 180 NMLHISYEGGPLEDPWT 196


>gi|167909635|ref|ZP_02496726.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei 112]
 gi|254196388|ref|ZP_04902812.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei S13]
 gi|254296226|ref|ZP_04963683.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei 406e]
 gi|157805735|gb|EDO82905.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei 406e]
 gi|169653131|gb|EDS85824.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei S13]
          Length = 510

 Score = 44.9 bits (104), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 44/175 (25%), Gaps = 7/175 (4%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           ++FSGG DS+  L  A      V  +SF  G     ++E       +   +         
Sbjct: 233 VMFSGGIDSAIVLQLAHRYHPDVTAISF--GLPGSNDIEIAHRYCAEHG-IRHVIYTFTK 289

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           +D +  +             +       +            + L    +     G  ++ 
Sbjct: 290 QDLLENIDDAVYYGEFFEKIDAIDSAIAHFGYYIAHKLGLKVALCGEGSD-EIFGGYDLF 348

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
               +          +     ++      M + V    P M     E       +
Sbjct: 349 KTHAQPGALSLYRLNNLHRTDLQRVDRASMRNTVEARVPFMD---AELIDYVLSL 400


>gi|321314361|ref|YP_004206648.1| GMP synthase [Bacillus subtilis BSn5]
 gi|320020635|gb|ADV95621.1| GMP synthase [Bacillus subtilis BSn5]
          Length = 513

 Score = 44.9 bits (104), Expect = 0.008,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 54/187 (28%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E E                
Sbjct: 219 KQVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGEAE---------------- 262

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL- 126
               G           ++           K++  + P          F+      A +L 
Sbjct: 263 ----GVMKTFSEGFNMNVIKVDAQDRFLDKLKGVSDPEQKRKIIGNEFIYVFDDEADKLK 318

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI  +  G   TD          TI++      L  +    +  PL  L K E   L  +
Sbjct: 319 GIDYLAQGTLYTDIIESGTATAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRALGTE 378

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 379 LGIPDEI 385


>gi|260655872|ref|ZP_05861341.1| GMP synthase [Jonquetella anthropi E3_33 E1]
 gi|260629488|gb|EEX47682.1| GMP synthase [Jonquetella anthropi E3_33 E1]
          Length = 509

 Score = 44.9 bits (104), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 57/187 (30%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS   +       DR+E +  + G   + E E  L   K++   +  
Sbjct: 214 NDKVICGLSGGVDSSVAAALVSRAIGDRLECIFVNNGLLRQNEAEEVLESYKQMKLNVHY 273

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                            +   S+LT  +  + +   +  TF+                  
Sbjct: 274 V-------------DASEQFLSALTGVIEPERKRKIIGETFIRVFEEQARKIKGAR---- 316

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +             D I++      L  + ++ +  PL  L K E   L + 
Sbjct: 317 --WLLQGTLYPDVIESGARKGADVIKSHHNVGGLPQDMNMNLLEPLRDLFKDEVRALGRL 374

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 375 LGLPENI 381


>gi|99036011|ref|ZP_01315051.1| hypothetical protein Wendoof_01000105 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 387

 Score = 44.9 bits (104), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 61/189 (32%), Gaps = 24/189 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS   +        ++  +  D G   K +           + ++ +
Sbjct: 87  EKKVIAAVSGGVDSSVAAALTHKAIGKQLNCIFIDTGLLRKNQT----------IAMLKE 136

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +  +   L L+ L  I+     + +                 ++ FL+     +  +
Sbjct: 137 IPINYVDKSNLFLSRLKGITDPEEKRKIIGNTFIEVFEEEAKKIGDVDFLMQGTIYSDVV 196

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                         SG+      TI++      L  + ++ +  PL +L K E   L ++
Sbjct: 197 E-------------SGHASDNTSTIKSHHNVGGLPEKMNLKLVEPLRYLFKDEVRLLGKE 243

Query: 187 IGGQDLVNL 195
           IG  D +  
Sbjct: 244 IGLSDEIIF 252


>gi|42520092|ref|NP_966007.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Wolbachia endosymbiont of Drosophila melanogaster]
 gi|225630020|ref|YP_002726811.1| GMP synthase [Wolbachia sp. wRi]
 gi|50400362|sp|Q73IH1|GUAA_WOLPM RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|254800126|sp|C0R5H8|GUAA_WOLWR RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|42409829|gb|AAS13941.1| GMP synthase [Wolbachia endosymbiont of Drosophila melanogaster]
 gi|225592001|gb|ACN95020.1| GMP synthase [Wolbachia sp. wRi]
          Length = 520

 Score = 44.9 bits (104), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 61/189 (32%), Gaps = 24/189 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS   +        ++  +  D G   K +           + ++ +
Sbjct: 220 EKKVIAAVSGGVDSSVAAALTHKAIGKQLNCIFIDTGLLRKNQT----------IAMLKE 269

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +  +   L L+ L  I+     + +                 ++ FL+     +  +
Sbjct: 270 IPINYVDKSNLFLSRLKGITDPEEKRKIIGNTFIEVFEEEAKKIGDVDFLMQGTIYSDVV 329

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                         SG+      TI++      L  + ++ +  PL +L K E   L ++
Sbjct: 330 E-------------SGHASDNTSTIKSHHNVGGLPEKMNLKLVEPLRYLFKDEVRLLGKE 376

Query: 187 IGGQDLVNL 195
           IG  D +  
Sbjct: 377 IGLSDEIIF 385


>gi|58696743|ref|ZP_00372285.1| GMP synthase [Wolbachia endosymbiont of Drosophila simulans]
 gi|58537069|gb|EAL60195.1| GMP synthase [Wolbachia endosymbiont of Drosophila simulans]
          Length = 455

 Score = 44.9 bits (104), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 61/189 (32%), Gaps = 24/189 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS   +        ++  +  D G   K +           + ++ +
Sbjct: 197 EKKVIAAVSGGVDSSVAAALTHKAIGKQLNCIFIDTGLLRKNQT----------IAMLKE 246

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +  +   L L+ L  I+     + +                 ++ FL+     +  +
Sbjct: 247 IPINYVDKSNLFLSRLKGITDPEEKRKIIGNTFIEVFEEEAKKIGDVDFLMQGTIYSDVV 306

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                         SG+      TI++      L  + ++ +  PL +L K E   L ++
Sbjct: 307 E-------------SGHASDNTSTIKSHHNVGGLPEKMNLKLVEPLRYLFKDEVRLLGKE 353

Query: 187 IGGQDLVNL 195
           IG  D +  
Sbjct: 354 IGLSDEIIF 362


>gi|58698280|ref|ZP_00373198.1| GMP synthase [Wolbachia endosymbiont of Drosophila ananassae]
 gi|58535204|gb|EAL59285.1| GMP synthase [Wolbachia endosymbiont of Drosophila ananassae]
          Length = 497

 Score = 44.9 bits (104), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 61/189 (32%), Gaps = 24/189 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS   +        ++  +  D G   K +           + ++ +
Sbjct: 197 EKKVIAAVSGGVDSSVAAALTHKAIGKQLNCIFIDTGLLRKNQT----------IAMLKE 246

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +  +   L L+ L  I+     + +                 ++ FL+     +  +
Sbjct: 247 IPINYVDKSNLFLSRLKGITDPEEKRKIIGNTFIEVFEEEAKKIGDVDFLMQGTIYSDVV 306

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                         SG+      TI++      L  + ++ +  PL +L K E   L ++
Sbjct: 307 E-------------SGHASDNTSTIKSHHNVGGLPEKMNLKLVEPLRYLFKDEVRLLGKE 353

Query: 187 IGGQDLVNL 195
           IG  D +  
Sbjct: 354 IGLSDEIIF 362


>gi|258590908|emb|CBE67203.1| Argininosuccinate synthase (Citrulline--aspartate ligase) [NC10
           bacterium 'Dutch sediment']
          Length = 410

 Score = 44.9 bits (104), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/166 (11%), Positives = 43/166 (25%), Gaps = 2/166 (1%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI-VE 62
           ++K    +L +SGG D+S  L W ++ +   V     D GQ  +++      ++      
Sbjct: 1   MQKVKKIVLAYSGGLDTSVILRWLIETYQAEVIAFCADLGQGEELDPVREKALKTGASKV 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
            +   ++    D + P      +         +M           V  +     V     
Sbjct: 61  YIKDLREEFVRDFVFPCVKANAVYEGRYLLGTSMARPLIAKHQMAVAKKEGADAVAHGAT 120

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV 168
                     +     D                 +  +       +
Sbjct: 121 GKGNDQVRFELACYAIDPHIRIISPWREWDLNSRSDLIAYARRHDI 166


>gi|121610680|ref|YP_998487.1| phosphoadenosine phosphosulfate reductase [Verminephrobacter
           eiseniae EF01-2]
 gi|121555320|gb|ABM59469.1| phosphoadenosine phosphosulfate reductase [Verminephrobacter
           eiseniae EF01-2]
          Length = 363

 Score = 44.9 bits (104), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 38/113 (33%), Gaps = 2/113 (1%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELM 64
            +   ++  SGG+DS+  L  AL+R  R  +  +  D G  ++   E    + + +   +
Sbjct: 1   MSLKHVISVSGGKDSTATLLIALERCRREDIIAIFCDTGNEHEQTYEYLAYLEQALDIRI 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
            + K             +     +      A+       P +    R  I + 
Sbjct: 61  HRLKAEFSAQLATKRMFIARDQRTGRVYESAVVFDACGNPVSKRDTRGNIVMR 113


>gi|15806762|ref|NP_295482.1| tRNA-specific 2-thiouridylase MnmA [Deinococcus radiodurans R1]
 gi|6459532|gb|AAF11314.1|AE002017_5 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Deinococcus radiodurans R1]
          Length = 413

 Score = 44.9 bits (104), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/191 (10%), Positives = 45/191 (23%), Gaps = 18/191 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL-----------ECRLCVR 57
              L   SGG DSS   S   ++  +V      +   +K                   V 
Sbjct: 53  ERVLCAMSGGVDSSVTASLLKEQGYQVIGAMMRFWPDDKRTDTFDSCCSPDAAYEARRVA 112

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           +++                +    L + +                  NT V    ++   
Sbjct: 113 EQVGVPFYLLDYREPFQRHIVGPFLEEYARGRTPNP-------CVNCNTKVKFDELVKKA 165

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                 Y      +           +                   ++   +  P+  L+K
Sbjct: 166 KMLGCRYVATGHYVKRVDNAQGEVEFHRGDDPRKDQTYFLWGTPRDALPYILFPVGELEK 225

Query: 178 YETWKLAQDIG 188
            +  ++A + G
Sbjct: 226 PQVREIAAERG 236


>gi|15668871|ref|NP_247674.1| hypothetical protein MJ_0690 [Methanocaldococcus jannaschii DSM
          2661]
 gi|2833535|sp|Q58102|Y690_METJA RecName: Full=Uncharacterized protein MJ0690
 gi|1591405|gb|AAB98685.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
          2661]
          Length = 200

 Score = 44.9 bits (104), Expect = 0.008,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYG--QRNKVELECRLCV--RKKIVELMPKWK 68
          +LFSGG+DSS               ++ ++G     K+  E    +  + K++ L  K  
Sbjct: 8  VLFSGGKDSSLSAVILKKLGYNPHLITINFGVIPSYKLAEETAKILGFKHKVITLDRKIV 67

Query: 69 DSLGEDHI 76
          +   +  I
Sbjct: 68 EKAADMII 75


>gi|14195297|sp|Q9RTK1|MNMA_DEIRA RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 380

 Score = 44.9 bits (104), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/191 (10%), Positives = 45/191 (23%), Gaps = 18/191 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL-----------ECRLCVR 57
              L   SGG DSS   S   ++  +V      +   +K                   V 
Sbjct: 20  ERVLCAMSGGVDSSVTASLLKEQGYQVIGAMMRFWPDDKRTDTFDSCCSPDAAYEARRVA 79

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           +++                +    L + +                  NT V    ++   
Sbjct: 80  EQVGVPFYLLDYREPFQRHIVGPFLEEYARGRTPNP-------CVNCNTKVKFDELVKKA 132

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                 Y      +           +                   ++   +  P+  L+K
Sbjct: 133 KMLGCRYVATGHYVKRVDNAQGEVEFHRGDDPRKDQTYFLWGTPRDALPYILFPVGELEK 192

Query: 178 YETWKLAQDIG 188
            +  ++A + G
Sbjct: 193 PQVREIAAERG 203


>gi|325001372|ref|ZP_08122484.1| argininosuccinate synthase [Pseudonocardia sp. P1]
          Length = 474

 Score = 44.9 bits (104), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 23/57 (40%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  ++W  +        + D GQ ++ +L        +      +  D
Sbjct: 16 IAFSGGLDTSVAVAWMRENGAVPYAYTADLGQPDEPDLVAVRERALEYGAESARVVD 72


>gi|310640301|ref|YP_003945059.1| gmp synthase pp-atpase domain/subunit-like protein [Paenibacillus
           polymyxa SC2]
 gi|309245251|gb|ADO54818.1| GMP synthase PP-ATPase domain/subunit-like protein [Paenibacillus
           polymyxa SC2]
          Length = 512

 Score = 44.9 bits (104), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 53/183 (28%), Gaps = 20/183 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G                   L+ K 
Sbjct: 218 KKVLCALSGGVDSSVVAMLIHRAIGDQLTCMFIDHG-------------------LLRKG 258

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +     +  +    +  +   +  + ++     ++         N    VF    A    
Sbjct: 259 EAESVMETFVGKFDMKVVKIDARERFLSKLAGVDDPEQKRKIIGNEFIYVFEEESAKFDD 318

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +  G   TD          TI++      L  +    +  PL  L K E  K+ ++ 
Sbjct: 319 FDFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMKFKLIEPLNALFKDEVRKVGEEC 378

Query: 188 GGQ 190
           G  
Sbjct: 379 GLP 381


>gi|163857001|ref|YP_001631299.1| argininosuccinate synthase [Bordetella petrii DSM 12804]
 gi|226729214|sp|A9IQ90|ASSY_BORPD RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|163260729|emb|CAP43031.1| argG [Bordetella petrii]
          Length = 445

 Score = 44.9 bits (104), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 23/57 (40%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W  ++       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRNKGAIPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLID 72


>gi|153854202|ref|ZP_01995510.1| hypothetical protein DORLON_01501 [Dorea longicatena DSM 13814]
 gi|149753251|gb|EDM63182.1| hypothetical protein DORLON_01501 [Dorea longicatena DSM 13814]
          Length = 408

 Score = 44.9 bits (104), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 59/212 (27%), Gaps = 23/212 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L +SGG D++  + W  + F   V     D GQ  +++         K+     
Sbjct: 1   MKEKVVLAYSGGLDTTAIIPWLKETFNYDVICCCIDCGQGEELDGLEERA---KLSGAAK 57

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            + + + +D      +       +        +   ++    +  R +        +A  
Sbjct: 58  LYIEDIVDDFADNYIV---PCVQAHAVYEDEYLLGTSMARPAIAKRLVEIARKENAVAIC 114

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G T         +           I A     +L                + +     +
Sbjct: 115 HGATGKGNDQIRFELGITALAPDIKIIAPWRMTDL-----------WTMQSREDEIDYCK 163

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
             G    ++L  +  H+ Y   R+  +    G
Sbjct: 164 AHG----IDLPFDAKHS-YSRDRNLWHISHEG 190


>gi|254168784|ref|ZP_04875625.1| NAD+ synthetase [Aciduliprofundum boonei T469]
 gi|197622221|gb|EDY34795.1| NAD+ synthetase [Aciduliprofundum boonei T469]
          Length = 263

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 31/91 (34%), Gaps = 2/91 (2%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +A++  SGG DSST     +     DRV  +       +K + E    V  ++      
Sbjct: 25  KNAVIGLSGGLDSSTVAFLCVKALGRDRVLGVHMPDSVTSKEDKEDAKLVADELGIEFRT 84

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMK 97
            +     + +     L +   ++  K     
Sbjct: 85  IEIGEIVEKMNEKIKLNNEMSTANLKARIRM 115


>gi|160893013|ref|ZP_02073801.1| hypothetical protein CLOL250_00551 [Clostridium sp. L2-50]
 gi|156865096|gb|EDO58527.1| hypothetical protein CLOL250_00551 [Clostridium sp. L2-50]
          Length = 427

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 60/216 (27%), Gaps = 24/216 (11%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIV 61
           D+       +L +SGG D++  + W  + +   V     D GQ +++E            
Sbjct: 17  DLEMAKDKVVLAYSGGLDTTAIIPWLKETYDYDVICACIDVGQESELEG----------- 65

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
             + +     G   +  L ++ ++    +   V       N           +       
Sbjct: 66  --LDERAKYSGASKLYILDVVDELCDEYIMPTVQADAVYENKYLLGTSFARPLIAKKLVE 123

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           +A + G   I  G                  A +  +              +  +  E  
Sbjct: 124 VARKEGAVAICHGATGKGNDQLRFELSIKALAPDIKVIAVWRQPEW----KLDSRDAEIA 179

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
                      ++L  + +H+ Y   R+  +    G
Sbjct: 180 -----YCQAHGIDLPFDAAHS-YSRDRNIWHISHEG 209


>gi|225569309|ref|ZP_03778334.1| hypothetical protein CLOHYLEM_05391 [Clostridium hylemonae DSM
          15053]
 gi|225162108|gb|EEG74727.1| hypothetical protein CLOHYLEM_05391 [Clostridium hylemonae DSM
          15053]
          Length = 272

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 6/73 (8%)

Query: 1  MNDIIKK--APSALLLFSGGQDSSTCLS----WALDRFDRVETLSFDYGQRNKVELECRL 54
          ++ ++K+      ++ FSGG DS+  L      AL+    V  ++         +L+   
Sbjct: 11 LSHMLKEWTKEDVVVAFSGGADSALLLRAACDAALENGTDVYAVTVMTKLHPGSDLDTAR 70

Query: 55 CVRKKIVELMPKW 67
           V +++  L    
Sbjct: 71 RVAREMGALHRVL 83


>gi|218296057|ref|ZP_03496826.1| NAD+ synthetase [Thermus aquaticus Y51MC23]
 gi|218243434|gb|EED09963.1| NAD+ synthetase [Thermus aquaticus Y51MC23]
          Length = 281

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 2/62 (3%)

Query: 9  PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            A++  SGG DS+T L+ A+     DRV  L   +   + +  E    V +     + +
Sbjct: 38 EKAIVAVSGGVDSATTLALAVRALGQDRVHALFLPHRDSSPLSREHAYLVAETFGVALEE 97

Query: 67 WK 68
            
Sbjct: 98 VD 99


>gi|49203338|emb|CAD43058.1| putative asparagine synthetase [Pinus sylvestris]
          Length = 593

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 55/185 (29%), Gaps = 14/185 (7%)

Query: 13  LLFSGGQDSSTCLSWALDR----------FDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +L SGG DSS   + A              D++   SF  G +   +L+    V + +  
Sbjct: 231 VLLSGGLDSSLVAAVASRYLAATKAGKQWGDKLH--SFCVGLKGSPDLKAAKEVAEYLGT 288

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +  ++     +D I  +  +     +     +        +          + L    + 
Sbjct: 289 VHHEF-HFTVQDGIDAIEDVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVLSGEGSD 347

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
               G         + ++      +   +   +        S   V   + +L K E   
Sbjct: 348 EIFGGYLYFHKAPNKEEFHQETCRKIKALHMYDCLRANKSTSAWGVEARVPFLDK-EFVN 406

Query: 183 LAQDI 187
           +A DI
Sbjct: 407 VAMDI 411


>gi|332077819|gb|EGI88278.1| tRNA(Ile)-lysidine synthetase [Streptococcus pneumoniae GA41301]
          Length = 412

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 47/173 (27%), Gaps = 11/173 (6%)

Query: 6   KKAPSALLLFSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKI 60
           KK   A+L  SGG DS        ++  +    +     ++ QR +    E  L      
Sbjct: 17  KKHAKAVLALSGGLDSMFLFKVLSTYQKELEIELILAHVNHKQRIESDWEEKELRKLAAE 76

Query: 61  VELMPKWKDSLGED-----HILPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            EL     +  GE               ++   +  T  V     D+ +    +      
Sbjct: 77  AELPIYISNFSGEFSEARARNFRYDFFQEVMKKTGATALVTAHHADDQVETILMRLIRGT 136

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
            L + + +  +  +  I I      +                  N    + + 
Sbjct: 137 RLRYLSGIKEKQVVGEIEIIRPFLHFQKKDFPSIFHFEDTSNQENHYFRNRIR 189


>gi|332071333|gb|EGI81828.1| tRNA(Ile)-lysidine synthetase [Streptococcus pneumoniae GA17545]
          Length = 412

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 47/173 (27%), Gaps = 11/173 (6%)

Query: 6   KKAPSALLLFSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKI 60
           KK   A+L  SGG DS        ++  +    +     ++ QR +    E  L      
Sbjct: 17  KKHAKAVLALSGGLDSMFLFKVLSTYQKELEIELILAHVNHKQRIESDWEEKELRKLAAE 76

Query: 61  VELMPKWKDSLGED-----HILPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            EL     +  GE               ++   +  T  V     D+ +    +      
Sbjct: 77  AELPIYISNFSGEFSEARARNFRYDFFQEVMKKTGATALVTAHHADDQVETILMRLIRGT 136

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
            L + + +  +  +  I I      +                  N    + + 
Sbjct: 137 RLRYLSGIKEKQVVGEIEIIRPFLHFQKKDFPSIFHFEDTSNQENHYFRNRIR 189


>gi|332018385|gb|EGI58979.1| Asparagine synthetase [Acromyrmex echinatior]
          Length = 571

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 34/135 (25%), Gaps = 4/135 (2%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVET----LSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            L SGG DSS   +  + +           SF  G  +  ++     V + I     +  
Sbjct: 252 CLLSGGLDSSLVAALLVKQAKECNLKYKIQSFAIGMGDSPDIIAARQVAEYIGTEHHEII 311

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  +   +   ++  +    +T   A                 I+            G 
Sbjct: 312 FTQQDVINVLDNVIYSLETYDITTVRASIGMYLISRYIKQNTETIVIFSGEGADELAQGY 371

Query: 129 TNIVIGVCETDYSGY 143
                    TD    
Sbjct: 372 IYFRDAPNATDAHNE 386


>gi|330998820|ref|ZP_08322547.1| tRNA(Ile)-lysidine synthetase [Parasutterella excrementihominis YIT
           11859]
 gi|329576034|gb|EGG57553.1| tRNA(Ile)-lysidine synthetase [Parasutterella excrementihominis YIT
           11859]
          Length = 478

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 21/60 (35%), Gaps = 6/60 (10%)

Query: 11  ALLLFSGGQDSSTCLS---WAL-DRFDRVETLSFDYG-QRNKVEL-ECRLCVRKKIVELM 64
            ++ FSGG DSS  L          +  +  +   +G  ++  E  E      KK     
Sbjct: 50  VIVAFSGGLDSSVLLYAVSQLKGKSYGEITAVHVHHGLSKHANEWAEFCEERAKKCGVRF 109


>gi|315656488|ref|ZP_07909377.1| argininosuccinate synthase [Mobiluncus curtisii subsp. holmesii
          ATCC 35242]
 gi|315493047|gb|EFU82649.1| argininosuccinate synthase [Mobiluncus curtisii subsp. holmesii
          ATCC 35242]
          Length = 390

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
               +L +SGG D+S  + W  D+       +S D GQ  +     R     
Sbjct: 1  MTERVVLAYSGGLDTSVAIGWMKDKLGVDTIAVSVDVGQGGEDMDVIRQRALD 53


>gi|303256929|ref|ZP_07342943.1| tRNA(Ile)-lysidine synthase [Burkholderiales bacterium 1_1_47]
 gi|302860420|gb|EFL83497.1| tRNA(Ile)-lysidine synthase [Burkholderiales bacterium 1_1_47]
          Length = 478

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 21/60 (35%), Gaps = 6/60 (10%)

Query: 11  ALLLFSGGQDSSTCLS---WAL-DRFDRVETLSFDYG-QRNKVEL-ECRLCVRKKIVELM 64
            ++ FSGG DSS  L          +  +  +   +G  ++  E  E      KK     
Sbjct: 50  VIVAFSGGLDSSVLLYAVSQLKGKSYGEITAVHVHHGLSKHANEWAEFCEERAKKCGVRF 109


>gi|283807136|pdb|3K32|A Chain A, The Crystal Structure Of Predicted Subunit Of Trna
          Methyltransferase From Methanocaldococcus Jannaschii
          Dsm
 gi|283807137|pdb|3K32|B Chain B, The Crystal Structure Of Predicted Subunit Of Trna
          Methyltransferase From Methanocaldococcus Jannaschii
          Dsm
 gi|283807138|pdb|3K32|C Chain C, The Crystal Structure Of Predicted Subunit Of Trna
          Methyltransferase From Methanocaldococcus Jannaschii
          Dsm
 gi|283807139|pdb|3K32|D Chain D, The Crystal Structure Of Predicted Subunit Of Trna
          Methyltransferase From Methanocaldococcus Jannaschii
          Dsm
 gi|283807140|pdb|3K32|E Chain E, The Crystal Structure Of Predicted Subunit Of Trna
          Methyltransferase From Methanocaldococcus Jannaschii
          Dsm
 gi|283807141|pdb|3K32|F Chain F, The Crystal Structure Of Predicted Subunit Of Trna
          Methyltransferase From Methanocaldococcus Jannaschii
          Dsm
          Length = 203

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYG--QRNKVELECRLCV--RKKIVELMPKWK 68
          +LFSGG+DSS               ++ ++G     K+  E    +  + K++ L  K  
Sbjct: 11 VLFSGGKDSSLSAVILKKLGYNPHLITINFGVIPSYKLAEETAKILGFKHKVITLDRKIV 70

Query: 69 DSLGEDHI 76
          +   +  I
Sbjct: 71 EKAADXII 78


>gi|260575041|ref|ZP_05843042.1| GMP synthase, large subunit [Rhodobacter sp. SW2]
 gi|259022663|gb|EEW25958.1| GMP synthase, large subunit [Rhodobacter sp. SW2]
          Length = 518

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 53/184 (28%), Gaps = 17/184 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS       +   D++  +  D+G     E E              +
Sbjct: 220 KGRVICALSGGVDSSVAAILIHEAIGDQLTCVYVDHGLMRLNESE--------------Q 265

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 E + LPL    + +            +        +          A   A  L
Sbjct: 266 VVSMFREHYNLPLIHADESALFLGKLEGVSDPETKRKIIGGLFIEVFEKHAKAIGGAEFL 325

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+    +      TI++      L    ++ +  PL  L K E   L ++
Sbjct: 326 AQGTLYPDVIESV--SFSGGPSVTIKSHHNVGGLPARMNMQLVEPLRELFKDEVRALGRE 383

Query: 187 IGGQ 190
           +G  
Sbjct: 384 LGLP 387


>gi|225855746|ref|YP_002737257.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase) [Streptococcus
           pneumoniae P1031]
 gi|254789052|sp|C1CN76|TILS_STRZP RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|225726142|gb|ACO21994.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase) [Streptococcus
           pneumoniae P1031]
          Length = 425

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 47/173 (27%), Gaps = 11/173 (6%)

Query: 6   KKAPSALLLFSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKI 60
           KK   A+L  SGG DS        ++  +    +     ++ QR +    E  L      
Sbjct: 17  KKHAKAVLALSGGLDSMFLFKVLSTYQKELEIELILAHVNHKQRIESDWEEKELRKLAAE 76

Query: 61  VELMPKWKDSLGED-----HILPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            EL     +  GE               ++   +  T  V     D+ +    +      
Sbjct: 77  AELPIYISNFSGEFSEARARNFRYDFFQEVMKKTGATALVTAHHADDQVETILMRLIRGT 136

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
            L + + +  +  +  I I      +                  N    + + 
Sbjct: 137 RLRYLSGIKEKQVVGEIEIIRPFLHFQKKDFPSIFHFEDTSNQENHYFRNRIR 189


>gi|225853622|ref|YP_002735134.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase) [Streptococcus
           pneumoniae JJA]
 gi|254789051|sp|C1CH91|TILS_STRZJ RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|225724064|gb|ACO19917.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase) [Streptococcus
           pneumoniae JJA]
 gi|332199078|gb|EGJ13159.1| tRNA(Ile)-lysidine synthetase [Streptococcus pneumoniae GA47901]
          Length = 425

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 47/173 (27%), Gaps = 11/173 (6%)

Query: 6   KKAPSALLLFSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKI 60
           KK   A+L  SGG DS        ++  +    +     ++ QR +    E  L      
Sbjct: 17  KKHAKAVLALSGGLDSMFLFKVLSTYQKELEIELILAHVNHKQRIESDWEEKELRKLAAE 76

Query: 61  VELMPKWKDSLGED-----HILPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            EL     +  GE               ++   +  T  V     D+ +    +      
Sbjct: 77  AELPIYISNFSGEFSEARARNFRYDFFQEVMKKTGATALVTAHHADDQVETILMRLIRGT 136

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
            L + + +  +  +  I I      +                  N    + + 
Sbjct: 137 RLRYLSGIKEKQVVGEIEIIRPFLHFQKKDFPSIFHFEDTSNQENHYFRNRIR 189


>gi|221230959|ref|YP_002510111.1| ATP-binding PP-loop family protein [Streptococcus pneumoniae ATCC
           700669]
 gi|254789050|sp|B8ZJI9|TILS_STRPJ RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|220673419|emb|CAR67877.1| putative ATP-binding PP-loop family protein [Streptococcus
           pneumoniae ATCC 700669]
          Length = 425

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 47/173 (27%), Gaps = 11/173 (6%)

Query: 6   KKAPSALLLFSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKI 60
           KK   A+L  SGG DS        ++  +    +     ++ QR +    E  L      
Sbjct: 17  KKHAKAVLALSGGLDSMFLFKVLSTYQKELEIELILAHVNHKQRIESDWEEKELRKLAAE 76

Query: 61  VELMPKWKDSLGED-----HILPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            EL     +  GE               ++   +  T  V     D+ +    +      
Sbjct: 77  AELPIYISNFSGEFSEARARNFRYDFFQEVMKKTGATALVTAHHADDQVETILMRLIRGT 136

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
            L + + +  +  +  I I      +                  N    + + 
Sbjct: 137 RLRYLSGIKEKQVVGEIEIIRPFLHFQKKDFPSIFHFEDTSNQENHYFRNRIR 189


>gi|168576121|ref|ZP_02722026.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase) [Streptococcus
           pneumoniae MLV-016]
 gi|183578020|gb|EDT98548.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase) [Streptococcus
           pneumoniae MLV-016]
          Length = 425

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 47/173 (27%), Gaps = 11/173 (6%)

Query: 6   KKAPSALLLFSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKI 60
           KK   A+L  SGG DS        ++  +    +     ++ QR +    E  L      
Sbjct: 17  KKHAKAVLALSGGLDSMFLFKVLSTYQKELEIELILAHVNHKQRIESDWEEKELRKLAAE 76

Query: 61  VELMPKWKDSLGED-----HILPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            EL     +  GE               ++   +  T  V     D+ +    +      
Sbjct: 77  AELPIYISNFSGEFSEARARNFRYDFFQEVMKKTGATALVTAHHADDQVETILMRLIRGT 136

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
            L + + +  +  +  I I      +                  N    + + 
Sbjct: 137 RLRYLSGIKEKQVVGEIEIIRPFLHFQKKDFPSIFHFEDTSNQENHYFRNRIR 189


>gi|168493989|ref|ZP_02718132.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase) [Streptococcus
           pneumoniae CDC3059-06]
 gi|183575851|gb|EDT96379.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase) [Streptococcus
           pneumoniae CDC3059-06]
          Length = 425

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 47/173 (27%), Gaps = 11/173 (6%)

Query: 6   KKAPSALLLFSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKI 60
           KK   A+L  SGG DS        ++  +    +     ++ QR +    E  L      
Sbjct: 17  KKHAKAVLALSGGLDSMFLFKVLSTYQKELEIELILAHVNHKQRIESDWEEKELRKLAAE 76

Query: 61  VELMPKWKDSLGED-----HILPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            EL     +  GE               ++   +  T  V     D+ +    +      
Sbjct: 77  AELPIYISNFSGEFSEARARNFRYDFFQEVMKKTGATALVTAHHADDQVETILMRLIRGT 136

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
            L + + +  +  +  I I      +                  N    + + 
Sbjct: 137 RLRYLSGIKEKQVVGEIEIIRPFLHFQKKDFPSIFHFEDTSNQENHYFRNRIR 189


>gi|149020169|ref|ZP_01835143.1| MesJ/Ycf62 family protein [Streptococcus pneumoniae SP23-BS72]
 gi|147930847|gb|EDK81828.1| MesJ/Ycf62 family protein [Streptococcus pneumoniae SP23-BS72]
          Length = 425

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 47/173 (27%), Gaps = 11/173 (6%)

Query: 6   KKAPSALLLFSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKI 60
           KK   A+L  SGG DS        ++  +    +     ++ QR +    E  L      
Sbjct: 17  KKHAKAVLALSGGLDSMFLFKVLSTYQKELEIELILAHVNHKQRIESDWEEKELRKLAAE 76

Query: 61  VELMPKWKDSLGED-----HILPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            EL     +  GE               ++   +  T  V     D+ +    +      
Sbjct: 77  AELPIYISNFSGEFSEARARNFRYDFFQEVMKKTGATALVTAHHADDQVETILMRLIRGT 136

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
            L + + +  +  +  I I      +                  N    + + 
Sbjct: 137 RLRYLSGIKEKQVVGEIEIIRPFLHFQKKDFPSIFHFEDTSNQENHYFRNRIR 189


>gi|148988915|ref|ZP_01820330.1| MesJ/Ycf62 family protein [Streptococcus pneumoniae SP6-BS73]
 gi|147925726|gb|EDK76802.1| MesJ/Ycf62 family protein [Streptococcus pneumoniae SP6-BS73]
          Length = 425

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 47/173 (27%), Gaps = 11/173 (6%)

Query: 6   KKAPSALLLFSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKI 60
           KK   A+L  SGG DS        ++  +    +     ++ QR +    E  L      
Sbjct: 17  KKHAKAVLALSGGLDSMFLFKVLSTYQKELEIELILAHVNHKQRIESDWEEKELRKLAAE 76

Query: 61  VELMPKWKDSLGED-----HILPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            EL     +  GE               ++   +  T  V     D+ +    +      
Sbjct: 77  AELPIYISNFSGEFSEARARNFRYDFFQEVMKKTGATALVTAHHADDQVETILMRLIRGT 136

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
            L + + +  +  +  I I      +                  N    + + 
Sbjct: 137 RLRYLSGIKEKQVVGEIEIIRPFLHFQKKDFPSIFHFEDTSNQENHYFRNRIR 189


>gi|148984555|ref|ZP_01817843.1| MesJ/Ycf62 family protein [Streptococcus pneumoniae SP3-BS71]
 gi|147923332|gb|EDK74446.1| MesJ/Ycf62 family protein [Streptococcus pneumoniae SP3-BS71]
 gi|301799160|emb|CBW31672.1| putative ATP-binding PP-loop family protein [Streptococcus
           pneumoniae OXC141]
          Length = 425

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 47/173 (27%), Gaps = 11/173 (6%)

Query: 6   KKAPSALLLFSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKI 60
           KK   A+L  SGG DS        ++  +    +     ++ QR +    E  L      
Sbjct: 17  KKHAKAVLALSGGLDSMFLFKVLSTYQKELEIELILAHVNHKQRIESDWEEKELRKLAAE 76

Query: 61  VELMPKWKDSLGED-----HILPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            EL     +  GE               ++   +  T  V     D+ +    +      
Sbjct: 77  AELPIYISNFSGEFSEARARNFRYDFFQEVMKKTGATALVTAHHADDQVETILMRLIRGT 136

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
            L + + +  +  +  I I      +                  N    + + 
Sbjct: 137 RLRYLSGIKEKQVVGEIEIIRPFLHFQKKDFPSIFHFEDTSNQENHYFRNRIR 189


>gi|149013373|ref|ZP_01834082.1| MesJ/Ycf62 family protein [Streptococcus pneumoniae SP19-BS75]
 gi|182682980|ref|YP_001834727.1| mesJ/ycf62 family protein [Streptococcus pneumoniae CGSP14]
 gi|194398531|ref|YP_002036732.1| tRNA(Ile)-lysidine synthase [Streptococcus pneumoniae G54]
 gi|303254912|ref|ZP_07340997.1| tRNA(Ile)-lysidine synthase [Streptococcus pneumoniae BS455]
 gi|303259737|ref|ZP_07345713.1| mesJ/ycf62 family protein [Streptococcus pneumoniae SP-BS293]
 gi|303262204|ref|ZP_07348149.1| mesJ/ycf62 family protein [Streptococcus pneumoniae SP14-BS292]
 gi|303265400|ref|ZP_07351307.1| mesJ/ycf62 family protein [Streptococcus pneumoniae BS397]
 gi|303266052|ref|ZP_07351946.1| mesJ/ycf62 family protein [Streptococcus pneumoniae BS457]
 gi|303268460|ref|ZP_07354254.1| mesJ/ycf62 family protein [Streptococcus pneumoniae BS458]
 gi|226695547|sp|B5E578|TILS_STRP4 RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|226695549|sp|B2IQZ8|TILS_STRPS RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|147762896|gb|EDK69844.1| MesJ/Ycf62 family protein [Streptococcus pneumoniae SP19-BS75]
 gi|182628314|gb|ACB89262.1| mesJ/ycf62 family protein [Streptococcus pneumoniae CGSP14]
 gi|194358198|gb|ACF56646.1| tRNA(Ile)-lysidine synthase [Streptococcus pneumoniae G54]
 gi|301800984|emb|CBW33645.1| putative ATP-binding PP-loop family protein [Streptococcus
           pneumoniae INV200]
 gi|302598183|gb|EFL65244.1| tRNA(Ile)-lysidine synthase [Streptococcus pneumoniae BS455]
 gi|302636844|gb|EFL67334.1| mesJ/ycf62 family protein [Streptococcus pneumoniae SP14-BS292]
 gi|302639289|gb|EFL69748.1| mesJ/ycf62 family protein [Streptococcus pneumoniae SP-BS293]
 gi|302641961|gb|EFL72314.1| mesJ/ycf62 family protein [Streptococcus pneumoniae BS458]
 gi|302644356|gb|EFL74609.1| mesJ/ycf62 family protein [Streptococcus pneumoniae BS457]
 gi|302645077|gb|EFL75317.1| mesJ/ycf62 family protein [Streptococcus pneumoniae BS397]
          Length = 425

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 47/173 (27%), Gaps = 11/173 (6%)

Query: 6   KKAPSALLLFSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKI 60
           KK   A+L  SGG DS        ++  +    +     ++ QR +    E  L      
Sbjct: 17  KKHAKAVLALSGGLDSMFLFKVLSTYQKELEIELILAHVNHKQRIESDWEEKELRKLAAE 76

Query: 61  VELMPKWKDSLGED-----HILPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            EL     +  GE               ++   +  T  V     D+ +    +      
Sbjct: 77  AELPIYISNFSGEFSEARARNFRYDFFQEVMKKTGATALVTAHHADDQVETILMRLIRGT 136

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
            L + + +  +  +  I I      +                  N    + + 
Sbjct: 137 RLRYLSGIKEKQVVGEIEIIRPFLHFQKKDFPSIFHFEDTSNQENHYFRNRIR 189


>gi|148997947|ref|ZP_01825460.1| MesJ/Ycf62 family protein [Streptococcus pneumoniae SP11-BS70]
 gi|168491781|ref|ZP_02715924.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase) [Streptococcus
           pneumoniae CDC0288-04]
 gi|169834329|ref|YP_001693445.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase) [Streptococcus
           pneumoniae Hungary19A-6]
 gi|307066647|ref|YP_003875613.1| putative ATPase [Streptococcus pneumoniae AP200]
 gi|226695548|sp|B1I6Y3|TILS_STRPI RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|147755957|gb|EDK63000.1| MesJ/Ycf62 family protein [Streptococcus pneumoniae SP11-BS70]
 gi|168996831|gb|ACA37443.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase) [Streptococcus
           pneumoniae Hungary19A-6]
 gi|183574048|gb|EDT94576.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase) [Streptococcus
           pneumoniae CDC0288-04]
 gi|306408184|gb|ADM83611.1| Predicted ATPase of the PP-loop superfamily implicated in cell
           cycle control [Streptococcus pneumoniae AP200]
          Length = 425

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 47/173 (27%), Gaps = 11/173 (6%)

Query: 6   KKAPSALLLFSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKI 60
           KK   A+L  SGG DS        ++  +    +     ++ QR +    E  L      
Sbjct: 17  KKHAKAVLALSGGLDSMFLFKVLSTYQKELEIELILAHVNHKQRIESDWEEKELRKLAAE 76

Query: 61  VELMPKWKDSLGED-----HILPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            EL     +  GE               ++   +  T  V     D+ +    +      
Sbjct: 77  AELPIYISNFSGEFSEARARNFRYDFFQEVMKKTGATALVTAHHADDQVETILMRLIRGT 136

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
            L + + +  +  +  I I      +                  N    + + 
Sbjct: 137 RLRYLSGIKEKQVVGEIEIIRPFLHFQKKDFPSIFHFEDTSNQENHYFRNRIR 189


>gi|148993574|ref|ZP_01823045.1| MesJ/Ycf62 family protein [Streptococcus pneumoniae SP9-BS68]
 gi|149003152|ref|ZP_01828061.1| MesJ/Ycf62 family protein [Streptococcus pneumoniae SP14-BS69]
 gi|149007705|ref|ZP_01831314.1| MesJ/Ycf62 family protein [Streptococcus pneumoniae SP18-BS74]
 gi|168487652|ref|ZP_02712160.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase) [Streptococcus
           pneumoniae CDC1087-00]
 gi|168489346|ref|ZP_02713545.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase) [Streptococcus
           pneumoniae SP195]
 gi|225860057|ref|YP_002741566.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase) [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|237651091|ref|ZP_04525343.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase) [Streptococcus
           pneumoniae CCRI 1974]
 gi|237821203|ref|ZP_04597048.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase) [Streptococcus
           pneumoniae CCRI 1974M2]
 gi|298229478|ref|ZP_06963159.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase) [Streptococcus
           pneumoniae str. Canada MDR_19F]
 gi|298255106|ref|ZP_06978692.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase) [Streptococcus
           pneumoniae str. Canada MDR_19A]
 gi|298501801|ref|YP_003723741.1| tRNA(Ile)-lysidine synthase [Streptococcus pneumoniae TCH8431/19A]
 gi|307126185|ref|YP_003878216.1| tRNA(Ile)-lysidine synthase [Streptococcus pneumoniae 670-6B]
 gi|254789053|sp|C1CNP4|TILS_STRZT RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|147758893|gb|EDK65889.1| MesJ/Ycf62 family protein [Streptococcus pneumoniae SP14-BS69]
 gi|147760700|gb|EDK67672.1| MesJ/Ycf62 family protein [Streptococcus pneumoniae SP18-BS74]
 gi|147927795|gb|EDK78817.1| MesJ/Ycf62 family protein [Streptococcus pneumoniae SP9-BS68]
 gi|183569575|gb|EDT90103.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase) [Streptococcus
           pneumoniae CDC1087-00]
 gi|183572160|gb|EDT92688.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase) [Streptococcus
           pneumoniae SP195]
 gi|225727017|gb|ACO22868.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase) [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|298237396|gb|ADI68527.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidine synthetase)
           [Streptococcus pneumoniae TCH8431/19A]
 gi|306483247|gb|ADM90116.1| tRNA(Ile)-lysidine synthase [Streptococcus pneumoniae 670-6B]
 gi|327388996|gb|EGE87344.1| tRNA(Ile)-lysidine synthetase [Streptococcus pneumoniae GA04375]
 gi|332071714|gb|EGI82207.1| tRNA(Ile)-lysidine synthetase [Streptococcus pneumoniae GA17570]
          Length = 425

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 47/173 (27%), Gaps = 11/173 (6%)

Query: 6   KKAPSALLLFSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKI 60
           KK   A+L  SGG DS        ++  +    +     ++ QR +    E  L      
Sbjct: 17  KKHAKAVLALSGGLDSMFLFKVLSTYQKELEIELILAHVNHKQRIESDWEEKELRKLAAE 76

Query: 61  VELMPKWKDSLGED-----HILPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            EL     +  GE               ++   +  T  V     D+ +    +      
Sbjct: 77  AELPIYISNFSGEFSEARARNFRYDFFQEVMKKTGATALVTAHHADDQVETILMRLIRGT 136

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
            L + + +  +  +  I I      +                  N    + + 
Sbjct: 137 RLRYLSGIKEKQVVGEIEIIRPFLHFQKKDFPSIFHFEDTSNQENHYFRNRIR 189


>gi|253577510|ref|ZP_04854824.1| GMP synthase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251843129|gb|EES71163.1| GMP synthase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 512

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 55/182 (30%), Gaps = 20/182 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS           D++  +  D+G                   L+ K +
Sbjct: 219 KVLCALSGGVDSSVVAMLIHKAIGDQLTCMFIDHG-------------------LLRKGE 259

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                +  +    +  +   +  + ++     ++         N    VF    A     
Sbjct: 260 AESVMETFVGKFDMKVVKIDARERFLSKLAGVDDPEQKRKIIGNEFIYVFDEESAKFDDF 319

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
           T +  G   TD          TI++      L  +    +  PL  L K E  K+ +++G
Sbjct: 320 TYLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMKFKLIEPLKTLFKDEVRKVGEELG 379

Query: 189 GQ 190
             
Sbjct: 380 LP 381


>gi|119476442|ref|ZP_01616793.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [marine gamma proteobacterium HTCC2143]
 gi|119450306|gb|EAW31541.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [marine gamma proteobacterium HTCC2143]
          Length = 526

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 50/184 (27%), Gaps = 17/184 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS   +        ++  +  D G            +RK   + +  
Sbjct: 228 TDKVLLGLSGGVDSSVVAALLHRAIGSQLTCVFVDNG-----------LLRKNEGDQVMD 276

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                    ++          + + ++   K +                L+       + 
Sbjct: 277 MFAKNMGVKVIRADAADIFLGNLVGESDPEKKRKIIGNTFIDIFDQQAALIQDVNWLAQG 336

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I          + +     +   I++      L  +    +  PL  L K E  K+  +
Sbjct: 337 TIY-----PDVIESAAGKTGKAHVIKSHHNVGGLPDDMQFKLIEPLRELFKDEVRKIGLE 391

Query: 187 IGGQ 190
           +G  
Sbjct: 392 LGLP 395


>gi|83647621|ref|YP_436056.1| GMP synthase [Hahella chejuensis KCTC 2396]
 gi|123531578|sp|Q2SCJ3|GUAA_HAHCH RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|83635664|gb|ABC31631.1| GMP synthase, PP-ATPase domain/subunit [Hahella chejuensis KCTC
           2396]
          Length = 526

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 56/187 (29%), Gaps = 23/187 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS   +       D++  +  D G                   L+  
Sbjct: 228 QDKVLLGLSGGVDSSVVAALLHRAIGDQLTCVFVDNG-------------------LLRL 268

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +     D       +  +  ++  + ++    +N+         +    VF A  A   
Sbjct: 269 HEGDQVMDMFAKNMGIKVVRANAQDQFLSKLAGENDPERKRKIIGHTFIEVFDAEAAKIK 328

Query: 127 GITNIVI---GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            +  +          + +     +   I++      L  +  + +  PL  L K E  K+
Sbjct: 329 DVKWLAQGTIYPDVIESAAAKTGKAHVIKSHHNVGGLPEDMEMQLVEPLRELFKDEVRKI 388

Query: 184 AQDIGGQ 190
             ++G  
Sbjct: 389 GLELGLP 395


>gi|229180948|ref|ZP_04308283.1| Argininosuccinate synthase [Bacillus cereus 172560W]
 gi|228602505|gb|EEK59991.1| Argininosuccinate synthase [Bacillus cereus 172560W]
          Length = 411

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          K    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 12 KKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48


>gi|229198789|ref|ZP_04325485.1| Argininosuccinate synthase [Bacillus cereus m1293]
 gi|228584722|gb|EEK42844.1| Argininosuccinate synthase [Bacillus cereus m1293]
          Length = 411

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          K    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 12 KKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48


>gi|227833170|ref|YP_002834877.1| Argininosuccinate synthase [Corynebacterium aurimucosum ATCC
          700975]
 gi|262184155|ref|ZP_06043576.1| argininosuccinate synthase [Corynebacterium aurimucosum ATCC
          700975]
 gi|227454186|gb|ACP32939.1| Argininosuccinate synthase [Corynebacterium aurimucosum ATCC
          700975]
          Length = 404

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 19/53 (35%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
               +L +SGG D+S  +   A      V  +S D GQ  +     R     
Sbjct: 1  MTARVVLAYSGGLDTSVAIPYLAKMTGGEVIAVSLDLGQGGEDMESVRQRALD 53


>gi|227544348|ref|ZP_03974397.1| GMP synthase (glutamine-hydrolyzing) [Lactobacillus reuteri
           CF48-3A]
 gi|300908415|ref|ZP_07125878.1| GMP synthase (glutamine-hydrolyzing) [Lactobacillus reuteri SD2112]
 gi|227185690|gb|EEI65761.1| GMP synthase (glutamine-hydrolyzing) [Lactobacillus reuteri
           CF48-3A]
 gi|300893822|gb|EFK87180.1| GMP synthase (glutamine-hydrolyzing) [Lactobacillus reuteri SD2112]
          Length = 538

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 54/187 (28%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS           D++  +  D+G   K E +      + +  L   
Sbjct: 243 NKKVILGLSGGVDSSVTAVLIHKAIGDQLTCIFVDHGLLRKNEAD------QVMDALSRD 296

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              ++ +       +      +   +   +  ++                 F        
Sbjct: 297 LGVNIIKVDAADRFLGKLEGVTDPEQKRKIIGKEFIEV-------------FNEEAKKIK 343

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G   TD          TI++      L  +    +  PL  L K ET +L + 
Sbjct: 344 DADFLAQGTLYTDVIESGTDTAQTIKSHHNVGGLPKKLGFKLIEPLRKLFKDETRELGEK 403

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 404 LGIPHEL 410


>gi|254431220|ref|ZP_05044923.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Cyanobium sp. PCC 7001]
 gi|197625673|gb|EDY38232.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Cyanobium sp. PCC 7001]
          Length = 399

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/117 (11%), Positives = 28/117 (23%), Gaps = 9/117 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +  SGG DSS   +  ++    VE L+        +      C  + +V+     + 
Sbjct: 33  RVAVGLSGGVDSSLTAALLVEAGWEVEGLTL------WLMSGKGACCAEGLVDAAGICEQ 86

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                H++               +          P         +        A   
Sbjct: 87  LGVPHHVVDFRDHFRAQIVDFLVD---GYAAGVTPLPCSRCNREVKFAPMLAWAREQ 140


>gi|330834163|ref|YP_004408891.1| argininosuccinate synthase [Metallosphaera cuprina Ar-4]
 gi|329566302|gb|AEB94407.1| argininosuccinate synthase [Metallosphaera cuprina Ar-4]
          Length = 393

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/102 (12%), Positives = 40/102 (39%), Gaps = 8/102 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQ-----RNKVELECRLCVRK 58
           +K     +L +SGG D++  + W  + +   V ++S D GQ     + +        V+ 
Sbjct: 1   MKM--KIVLAYSGGLDTTVAIRWLKETYNAEVVSVSVDVGQLEDFKKIEERAYLAGSVKH 58

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD 100
            +++   ++ +      ++   +  ++   +      +  + 
Sbjct: 59  YLIDAKNEFAERFAITDVIMNGLYEEVYPLATALARPLIAEK 100


>gi|300214168|gb|ADJ78584.1| Argininosuccinate synthase(Citrulline--aspartate ligase)
           [Lactobacillus salivarius CECT 5713]
          Length = 403

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 46/171 (26%), Gaps = 13/171 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +    +L +SGG D+S  ++W  ++   V     D G     E +    +++K       
Sbjct: 2   EKEKVVLAYSGGLDTSVEIAWLKNKGYDVIACCIDVG-----EGKDLEAIKEK------- 49

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +G    + +    + +   +   +       N           + +     +A   
Sbjct: 50  -GLKVGAVESIVIDAKHEFAEEYVLPALQGHAYYENKYPLVSALSRPLIVKKLVEVAKEH 108

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
           G T I  G                    E  I   +          +   K
Sbjct: 109 GATAIAHGCTGKGNDQVRFEVGIHALVPEMKIEDPIRDLHWSREEEIEYAK 159


>gi|255593058|ref|XP_002535783.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
           putative [Ricinus communis]
 gi|223521982|gb|EEF26602.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
           putative [Ricinus communis]
          Length = 156

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/136 (11%), Positives = 33/136 (24%), Gaps = 6/136 (4%)

Query: 4   IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +   +    ++  SGG DSS       ++   V  +             C     +   +
Sbjct: 1   MTDNSKIRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVC--TATEDYKD 58

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +           + +            + +    + +    PN  V     I        
Sbjct: 59  VAAVADQIGIPYYSVN---FEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDY 115

Query: 123 AYRLGITNIVIGVCET 138
           A  LG   +  G    
Sbjct: 116 AMTLGADYVATGHYAQ 131


>gi|21227453|ref|NP_633375.1| hypothetical protein MM_1351 [Methanosarcina mazei Go1]
 gi|20905823|gb|AAM31047.1| conserved protein [Methanosarcina mazei Go1]
          Length = 578

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 24/57 (42%), Gaps = 3/57 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIV 61
           ++  + ++  SGG DS   ++         V  +S  YG++   E E    V + + 
Sbjct: 202 QQGKTLVVPLSGGLDSRIIVAMLKRLGANDVICVS--YGRKGCRESEISKNVAEALG 256


>gi|32475335|ref|NP_868329.1| GMP synthase [Rhodopirellula baltica SH 1]
 gi|44887935|sp|Q7UFS3|GUAA_RHOBA RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|32445876|emb|CAD78607.1| GMP synthase [Rhodopirellula baltica SH 1]
          Length = 587

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 49/187 (26%), Gaps = 17/187 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS   +        ++  +  D G   K E +               
Sbjct: 289 NKRVICGLSGGVDSSVVAALLYKAIGPQLSCILVDNGLLRKNEQQ--------------I 334

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +         L I+              + Q+                      A+ L
Sbjct: 335 VLEEFSNHFKTDLHIVEAEDRFLADLAGIDEPQEKRRRIGHAFIECFKDEAAKIEDAHFL 394

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+      D    TI+       L  E    +  PL  L K E  +L  +
Sbjct: 395 AQGTLYPDVIESGA--DKDGPAATIKLHHNVGGLPEELGFELIEPLRDLFKDEVRRLGLE 452

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 453 LGLPEQL 459


>gi|150388741|ref|YP_001318790.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Alkaliphilus metalliredigens QYMF]
 gi|259647754|sp|A6TLR3|GUAA_ALKMQ RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|149948603|gb|ABR47131.1| GMP synthase, large subunit [Alkaliphilus metalliredigens QYMF]
          Length = 510

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 55/186 (29%), Gaps = 22/186 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS           D +  +  D+G            +RK   + +    
Sbjct: 217 KVLCALSGGVDSSVAAVLVHQAIGDNLTCVFVDHG-----------LLRKDEGDWVEDIF 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  E + + +            +    K++    P         +F+      A ++G 
Sbjct: 266 RNQFEMNFIRVN---------AEERFLGKLKGVTDPELKRKAIGELFIRVFEEEAQKIGD 316

Query: 129 T-NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G    D           I++      L  +    +  P  +L K E      ++
Sbjct: 317 FDFLVQGTLYPDIIESGTETAAVIKSHHNVGGLPEDMKFQLIEPFKFLFKDEVRIAGLEL 376

Query: 188 GGQDLV 193
           G  + +
Sbjct: 377 GVPEEI 382


>gi|328541853|ref|YP_004301962.1| Argininosuccinate synthase 2 [polymorphum gilvum SL003B-26A1]
 gi|326411603|gb|ADZ68666.1| Argininosuccinate synthase 2 [Polymorphum gilvum SL003B-26A1]
          Length = 406

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 6/75 (8%)

Query: 9  PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV---ELM 64
             +L +SGG D+S  L W        V T + D GQ  ++E        + +      +
Sbjct: 7  KKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEP--ARRKAEMLGIKEIFI 64

Query: 65 PKWKDSLGEDHILPL 79
             ++    D + P+
Sbjct: 65 EDVREEFVRDFVFPM 79


>gi|314966673|gb|EFT10772.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Propionibacterium acnes HL082PA2]
 gi|314981402|gb|EFT25496.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Propionibacterium acnes HL110PA3]
 gi|315092068|gb|EFT64044.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Propionibacterium acnes HL110PA4]
 gi|315103674|gb|EFT75650.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Propionibacterium acnes HL050PA2]
 gi|327327498|gb|EGE69274.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Propionibacterium acnes HL103PA1]
          Length = 396

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/89 (12%), Positives = 23/89 (25%), Gaps = 12/89 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLS---------FDYGQR---NKVELECRLCVR 57
             L   SGG DS+   +  ++    V  +             G R   +  +        
Sbjct: 32  KVLAAMSGGVDSAVAAARLVEAGHDVTGVHLALSRNPRSHREGSRGCCSLEDSFDARRAA 91

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDIS 86
            ++      W  S      +    + +  
Sbjct: 92  DRLGIPFYVWDFSDRFVVEVIDPFIAEYR 120


>gi|296446290|ref|ZP_06888236.1| GMP synthase, large subunit [Methylosinus trichosporium OB3b]
 gi|296256191|gb|EFH03272.1| GMP synthase, large subunit [Methylosinus trichosporium OB3b]
          Length = 531

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 51/183 (27%), Gaps = 12/183 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DS+       +   D +  +  D+G     E        +++V L     
Sbjct: 230 RVLCGLSGGVDSAVAAVLIHEAIGDALTCVFVDHGLLRAGE-------AEEVVSLFRDHY 282

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +            L  +   S  ++  +K +                +      A +   
Sbjct: 283 NIPLVHVEAQEMFLSAL---SGVEDPEVKRKTIGRLFIETFEEEAKRIAADGRGAPQFLA 339

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
              +        S          ++      L    ++ +  PL  L K E   L +++G
Sbjct: 340 QGTLYPDVIESVSFSGGPSVTI-KSHHNVGGLPERMNMQLVEPLRELFKDEVRALGRELG 398

Query: 189 GQD 191
             +
Sbjct: 399 LPE 401


>gi|282853930|ref|ZP_06263267.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Propionibacterium acnes J139]
 gi|282583383|gb|EFB88763.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Propionibacterium acnes J139]
          Length = 366

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/89 (12%), Positives = 23/89 (25%), Gaps = 12/89 (13%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS---------FDYGQR---NKVELECRLCVR 57
            L   SGG DS+   +  ++    V  +             G R   +  +        
Sbjct: 2  KVLAAMSGGVDSAVAAARLVEAGHDVTGVHLALSRNPRSHREGSRGCCSLEDSFDARRAA 61

Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDIS 86
           ++      W  S      +    + +  
Sbjct: 62 DRLGIPFYVWDFSDRFVVEVIDPFIAEYR 90


>gi|282896354|ref|ZP_06304376.1| Asparagine synthase (Glutamine-hydrolyzing) [Raphidiopsis brookii
           D9]
 gi|281198850|gb|EFA73729.1| Asparagine synthase (Glutamine-hydrolyzing) [Raphidiopsis brookii
           D9]
          Length = 611

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 59/194 (30%), Gaps = 16/194 (8%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +  SGG DSS   +  ++   +V   + D+G+    E      V + +   + K   S  
Sbjct: 234 VFLSGGLDSSIVAALLVESGVKVRAYALDFGEFGTSEYPYAQKVAEFLNIPLVKVDVSPK 293

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
                 +  +  +                +     +   N I       +    G   + 
Sbjct: 294 NIKKAIIPTVKALDL-----------PFGDGVTVPLYLINQIASQETQIVFNGEGGDQLF 342

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK---YETWKLAQDIGG 189
            G            ++   +  E A  +  +   T H    +  K    ET+   + +  
Sbjct: 343 AGWTNKPLIAAGVYQNQYSQHPENASFI-QQYLHTFHRLWGYESKVYQAETYDQIRQLNA 401

Query: 190 QDLVNLILEESHTC 203
           Q+ + L   +SH C
Sbjct: 402 QEWL-LDALDSHFC 414


>gi|120602664|ref|YP_967064.1| tRNA(Ile)-lysidine synthetase [Desulfovibrio vulgaris DP4]
 gi|120562893|gb|ABM28637.1| tRNA(Ile)-lysidine synthetase [Desulfovibrio vulgaris DP4]
          Length = 390

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/121 (13%), Positives = 30/121 (24%), Gaps = 14/121 (11%)

Query: 7   KAPSALLLFSGGQDSSTCL----SWALDRFDRVETLSFDYGQRNKV--ELECRLCVRKKI 60
           +    ++  SGG DS+  L             +  L  D+G R +   E    +     +
Sbjct: 61  RNCHCVVALSGGADSTALLLILHYLRQRLGLSLSALHVDHGLRPESAAEARAAVTFCHAL 120

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
              +          H L +  L  +      +       D           + I      
Sbjct: 121 GIPLAV--------HTLAVDELAAVWRVGTEEAGRKARYDLLAAALPSAAADWICTGHHL 172

Query: 121 T 121
            
Sbjct: 173 G 173


>gi|327401723|ref|YP_004342562.1| Argininosuccinate synthase [Archaeoglobus veneficus SNP6]
 gi|327317231|gb|AEA47847.1| Argininosuccinate synthase [Archaeoglobus veneficus SNP6]
          Length = 393

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 3/63 (4%)

Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            +L +SGG D++ C+    +++  D V T++ D GQ  + E++      KK  +     
Sbjct: 2  KVVLSYSGGLDTTVCIPLLKEKYGFDEVVTVTVDIGQPPE-EIKEAEKRGKKYADKHYTI 60

Query: 68 KDS 70
             
Sbjct: 61 DAK 63


>gi|315122791|ref|YP_004063280.1| argininosuccinate synthase [Candidatus Liberibacter solanacearum
          CLso-ZC1]
 gi|313496193|gb|ADR52792.1| argininosuccinate synthase [Candidatus Liberibacter solanacearum
          CLso-ZC1]
          Length = 408

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 29/79 (36%), Gaps = 4/79 (5%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + K     +L +SGG D+S  L W   ++   V     D GQ    E     C + K++ 
Sbjct: 1  MSKNIKKVVLAYSGGLDTSIILKWLQVEKGLEVVVFIADLGQ---GEELTAACDKAKLLG 57

Query: 63 LMPKWKDSLGEDHILPLAI 81
              +   L  + +     
Sbjct: 58 AKEVYVKDLRREFVRDFVF 76


>gi|317051162|ref|YP_004112278.1| GMP synthase large subunit [Desulfurispirillum indicum S5]
 gi|316946246|gb|ADU65722.1| GMP synthase, large subunit [Desulfurispirillum indicum S5]
          Length = 518

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 44/185 (23%), Gaps = 18/185 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           S L   SGG DSS           DR+  +  + G   K E      V K   +      
Sbjct: 223 SVLCALSGGVDSSVAAVLIHRAIGDRLTCVFVNNGLLRKNE---AEAVVKTFRDHYHMNL 279

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                       + G    S   K   +   +       V  R                 
Sbjct: 280 HYEDASDRFLQKLAG---VSDPEKKRKIIGNEFIYVFEDVKKRLG-----------SFDF 325

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   S         I++      L       +  P   L K E   +  ++G
Sbjct: 326 LAQGTLYPDVIESVSVKGPSAVIKSHHNVGGLPENIDFKLLEPFRELFKDEVRLVGLELG 385

Query: 189 GQDLV 193
             D +
Sbjct: 386 MPDEI 390


>gi|134045397|ref|YP_001096883.1| PP-loop domain-containing protein [Methanococcus maripaludis C5]
 gi|132663022|gb|ABO34668.1| PP-loop domain protein [Methanococcus maripaludis C5]
          Length = 258

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 23/55 (41%), Gaps = 1/55 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
          K    ++ +SGG DS+     A D    +  ++ D G  ++  ++      KK  
Sbjct: 20 KNKKVIVAYSGGVDSTLISKIASDATKTL-AVTVDNGFFSENVIKKAEDCAKKYN 73


>gi|20094082|ref|NP_613929.1| ATPase [Methanopyrus kandleri AV19]
 gi|19887071|gb|AAM01859.1| Predicted ATPase of the PP-loop superfamily [Methanopyrus
          kandleri AV19]
          Length = 225

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 16/32 (50%), Gaps = 1/32 (3%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRV-ETLSF 40
           A+ L SGG+DS+     A++    +   L+ 
Sbjct: 2  RAVALLSGGKDSTLAAHLAVEEGYELTHGLTV 33


>gi|46199840|ref|YP_005507.1| NH(3)-dependent NAD(+) synthetase [Thermus thermophilus HB27]
 gi|55981869|ref|YP_145166.1| NH(3)-dependent NAD(+) synthetase [Thermus thermophilus HB8]
 gi|46197467|gb|AAS81880.1| NH(3)-dependent NAD(+) synthetase [Thermus thermophilus HB27]
 gi|55773282|dbj|BAD71723.1| NH(3)-dependent NAD(+) synthetase [Thermus thermophilus HB8]
          Length = 281

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 2/62 (3%)

Query: 9  PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            A++  SGG DS+T L+ A+     +RV  L   + + +    E    V +     + +
Sbjct: 38 EKAIVAVSGGVDSATTLALAVRALGAERVHALFLPHRESSPTSREHAYLVAETFGVALEE 97

Query: 67 WK 68
            
Sbjct: 98 VD 99


>gi|313905035|ref|ZP_07838405.1| argininosuccinate synthase [Eubacterium cellulosolvens 6]
 gi|313470105|gb|EFR65437.1| argininosuccinate synthase [Eubacterium cellulosolvens 6]
          Length = 412

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 17/40 (42%), Gaps = 3/40 (7%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQ 44
           +   +L +SGG D +T L   L       +  +  + GQ
Sbjct: 1  MSEKVVLAYSGGLD-TTALIPWLKENFGYEIICVCINCGQ 39


>gi|222444394|ref|ZP_03606909.1| hypothetical protein METSMIALI_00005 [Methanobrevibacter smithii
           DSM 2375]
 gi|222433959|gb|EEE41124.1| hypothetical protein METSMIALI_00005 [Methanobrevibacter smithii
           DSM 2375]
          Length = 312

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 57/186 (30%), Gaps = 28/186 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             A++  SGG DSS C     +   D +  +  D+G   + E+E          E+   +
Sbjct: 26  EKAIIALSGGVDSSVCSVLVQEAIGDNLIAIFVDHGLLREGEVE----------EVTNTF 75

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           KD L  +++              ++     ++    P         +F+      A +  
Sbjct: 76  KDRLNFNYV------------DASEEFLNALEGVEDPEEKRKIIGKVFIDVFEREAEKTD 123

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G                       + L     + +  P+  L K E  ++   +
Sbjct: 124 AKYLVQGTIA-----PDWIESKGKIKSHHNLALPSGMVLELVEPIRDLYKDEVREIGLLL 178

Query: 188 GGQDLV 193
              + V
Sbjct: 179 DLPEKV 184


>gi|148642405|ref|YP_001272918.1| GMP synthase subunit B [Methanobrevibacter smithii ATCC 35061]
 gi|261351056|ref|ZP_05976473.1| GMP synthase [Methanobrevibacter smithii DSM 2374]
 gi|148551422|gb|ABQ86550.1| GMP synthase (glutamine-hydrolysing), PP-ATPase domain/subunit,
           GuaA [Methanobrevibacter smithii ATCC 35061]
 gi|288860396|gb|EFC92694.1| GMP synthase [Methanobrevibacter smithii DSM 2374]
          Length = 308

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 57/186 (30%), Gaps = 28/186 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             A++  SGG DSS C     +   D +  +  D+G   + E+E          E+   +
Sbjct: 22  EKAIIALSGGVDSSVCSVLVQEAIGDNLIAIFVDHGLLREGEVE----------EVTNTF 71

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           KD L  +++              ++     ++    P         +F+      A +  
Sbjct: 72  KDRLNFNYV------------DASEEFLNALEGVEDPEEKRKIIGKVFIDVFEREAEKTD 119

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G                       + L     + +  P+  L K E  ++   +
Sbjct: 120 AKYLVQGTIA-----PDWIESKGKIKSHHNLALPSGMVLELVEPIRDLYKDEVREIGLLL 174

Query: 188 GGQDLV 193
              + V
Sbjct: 175 DLPEKV 180


>gi|156741720|ref|YP_001431849.1| GMP synthase [Roseiflexus castenholzii DSM 13941]
 gi|156233048|gb|ABU57831.1| GMP synthase, large subunit [Roseiflexus castenholzii DSM 13941]
          Length = 512

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 46/183 (25%), Gaps = 17/183 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+           DR+  +  D G   + E      V     E      
Sbjct: 216 RVICALSGGVDSAVAALIVHHAIGDRLTCVFVDNGLLRQGE---AEQVVATFREHFHIP- 271

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L      D    +L      + +   +   FV                  G 
Sbjct: 272 --------LIAVDAADEFLEALAGVADPEQKRTIIGEKFVRIFEREARRIEGARFLAQGT 323

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                     +       +  TI+       L  +  +T+  PL +L K E       +G
Sbjct: 324 LY----PDVIESRAPDRQKGVTIKTHHNVGGLPADMQLTLVEPLRYLFKDEVRAAGHALG 379

Query: 189 GQD 191
             D
Sbjct: 380 LPD 382


>gi|86158770|ref|YP_465555.1| GMP synthase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775281|gb|ABC82118.1| GMP synthase (glutamine-hydrolyzing) [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 518

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 57/184 (30%), Gaps = 14/184 (7%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+           DR+  +  D G     E   R  V      +      
Sbjct: 220 VICALSGGVDSAVAALLVHRAIGDRLRCIFVDNGVLRAGE---RKQVEDVFGAMFHLPLV 276

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++          LG +   +   +   K +        V  + +  L      A  L   
Sbjct: 277 TVDASRR----FLGAL---AGVTDPERKRKIIGHEFIAVFEQEVERLAAHGARARFLVQG 329

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   V E   S        TI++      L  + ++ +  PL  L K E  +L  ++G 
Sbjct: 330 TLYPDVIE---SVSFRGPSATIKSHHNVGGLPEKMNLALVEPLRELFKDEVRELGLELGL 386

Query: 190 QDLV 193
            + +
Sbjct: 387 PEAI 390


>gi|317476539|ref|ZP_07935786.1| tRNA(Ile)-lysidine synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|316907282|gb|EFV28989.1| tRNA(Ile)-lysidine synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 370

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/192 (10%), Positives = 51/192 (26%), Gaps = 23/192 (11%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
            +       ++  SGG DS   L          E    ++  R K        V +    
Sbjct: 14  RLFMPTDKVIIALSGGADSVALLCLLQTLGYNCEAAHCNFHLRGKESDRDEAFVCQ---- 69

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                       HI+          ++  +++++++    L   +              +
Sbjct: 70  ---LCAKRQVPLHIVHFN----TVRTAEERHISIEMAARELRYEWFEEIRRKSGANVIAV 122

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A+    +   + +     +G    R    +            +  +  PL+ L + E   
Sbjct: 123 AHHRDDSVETLLLNLIRGTGINGLRGIRPK------------NGHIVRPLLCLDRKEIIN 170

Query: 183 LAQDIGGQDLVN 194
                G   + +
Sbjct: 171 YLNRTGQDYVTD 182


>gi|163757385|ref|ZP_02164474.1| argininosuccinate synthase [Hoeflea phototrophica DFL-43]
 gi|162284887|gb|EDQ35169.1| argininosuccinate synthase [Hoeflea phototrophica DFL-43]
          Length = 409

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 42/156 (26%), Gaps = 5/156 (3%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K     +L +SGG D+S  L W        V T + D GQ +++         + +    
Sbjct: 5   KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGDELGP--ARKKAELMGIPD 62

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                    +  +           +      + +   ++    +  R +         A 
Sbjct: 63  KNIYIEDVREEFV--RDFVFPMFRANAVYEGVYLLGTSIARPLISKRLVEIAEETGADAI 120

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
             G T         + S Y       + A      L
Sbjct: 121 AHGATGKGNDQVRFELSAYALNPDIKVIAPWRDWTL 156


>gi|119953563|ref|YP_945773.1| tRNA(Ile)-lysidine synthetase TilS [Borrelia turicatae 91E135]
 gi|119862334|gb|AAX18102.1| tRNA(Ile)-lysidine synthetase TilS [Borrelia turicatae 91E135]
          Length = 439

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 36/113 (31%), Gaps = 3/113 (2%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               ++ FSGG DS+T L    +   + +  L F +  R+  E    +   KK       
Sbjct: 22  KEKVIVAFSGGADSTTLLLSLKEYLNNNIVALYFAHYIRSDFEQNLEIEHIKKFCNFYSI 81

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                 +   + +         S+ +       D  L +    G + I L   
Sbjct: 82  --TFQIKRCSVDIKRKSRQLGMSVEELARKYRYDALLESFIENGASYIALAHN 132


>gi|39995758|ref|NP_951709.1| NAD synthetase [Geobacter sulfurreducens PCA]
 gi|39982522|gb|AAR33982.1| NAD+ synthetase [Geobacter sulfurreducens PCA]
 gi|298504768|gb|ADI83491.1| NAD+ synthetase [Geobacter sulfurreducens KN400]
          Length = 273

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 20/60 (33%), Gaps = 2/60 (3%)

Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           A+L  SGG DS+     A +    D V  +   Y   N         V +++       
Sbjct: 30 KAVLGLSGGIDSALVAFLAAEALGPDNVHAIIMPYRTSNPESEAHARLVAEQLGINHEVI 89


>gi|311067107|ref|YP_003972030.1| GMP synthase [Bacillus atrophaeus 1942]
 gi|310867624|gb|ADP31099.1| GMP synthase [Bacillus atrophaeus 1942]
          Length = 513

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 55/187 (29%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            + L   SGG DSS           D++  +  D+G   K E E                
Sbjct: 219 KNVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGEAE---------------- 262

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL- 126
               G           ++           K++  + P          F+      A +L 
Sbjct: 263 ----GVMKTFSEGFNMNVIKVDAKDRFLNKLKGVSDPEQKRKIIGNEFIYVFDDEADKLK 318

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI  +  G   TD          TI++      L  +    +  PL  L K E   L  +
Sbjct: 319 GIDYLAQGTLYTDIIESGTATAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRALGSE 378

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 379 LGIPDEI 385


>gi|229136910|ref|ZP_04265538.1| tRNA(Ile)-lysidine synthase [Bacillus cereus BDRD-ST26]
 gi|228646575|gb|EEL02781.1| tRNA(Ile)-lysidine synthase [Bacillus cereus BDRD-ST26]
          Length = 480

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 53/197 (26%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSW-----ALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           D++K+  + ++  SGG DS   L +     A  +F+ V     D    +    +      
Sbjct: 21  DVLKERSTIVVGVSGGPDSVALLYYLLEKRAAKQFEIVVA-HVD----HMFRGDESHEDL 75

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           + + +L  +         I           ++       +             R  + L 
Sbjct: 76  QFVQDLCKELGVICETIRINVSQYQQQYGMNAQVAARECRYAFLERIMKKYDAR-YVALG 134

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                     +  +V G     Y+G    R                    +  PL+ + K
Sbjct: 135 HHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNG--------------YLIRPLLGVTK 180

Query: 178 YETWKLAQDIGGQDLVN 194
            E       +     ++
Sbjct: 181 EEIVDYCHKLKIIPRID 197


>gi|281420586|ref|ZP_06251585.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella copri DSM 18205]
 gi|281405359|gb|EFB36039.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella copri DSM 18205]
          Length = 360

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/182 (12%), Positives = 41/182 (22%), Gaps = 4/182 (2%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K     +L SGG DSS  +          +      G   K E +C     + +      
Sbjct: 8   KDKRIAVLLSGGVDSSVVVWEFAQLGLHPDCFYIKIGPEEKEEWDCSSE--EDLEMATAV 65

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +    +  ++          +  T          N                     Y L
Sbjct: 66  ARKYGCKLQVVDCHHEYWNEVTRYTMEKVKAGFTPNPDVMCNRLIKFGAFDEKMGHNYDL 125

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYETWKLA 184
             T         +               +T     +          P+    K E  ++A
Sbjct: 126 IATGHYAQTETDENGDKWLVTSPDPVKDQTDFLAQIESWQLKKAIFPIGHHIKNEVREIA 185

Query: 185 QD 186
           ++
Sbjct: 186 EE 187


>gi|190574280|ref|YP_001972125.1| tRNA-specific 2-thiouridylase MnmA [Stenotrophomonas maltophilia
           K279a]
 gi|205828975|sp|B2FQX2|MNMA_STRMK RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|190012202|emb|CAQ45825.1| putative tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Stenotrophomonas maltophilia K279a]
          Length = 380

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 48/185 (25%), Gaps = 11/185 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            P  ++  SGG DSS      + + + V  L       +          R+  V +    
Sbjct: 3   TPRVMVGVSGGVDSSVAAWRLVQQGEAVAGLFMQNWADDGSGDCRAEDDRRDAVAVCGLL 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                                 + ++   +      PN  V     +        A  LG
Sbjct: 63  GIP------FHFRDFSSEYWQGVFEHFLAEYAAGRTPNPDVLCNREVKFKHFLDAARELG 116

Query: 128 ITNIVIGVCETDYSGYPD-----CRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G                    +         LG E       P+  L+K +  +
Sbjct: 117 AERIATGHYARVTQRGHQWLLLRGADRSKDQSYFLHQLGQEQLAATLFPIGDLEKTDLRR 176

Query: 183 LAQDI 187
           +A+D+
Sbjct: 177 IARDV 181


>gi|124486111|ref|YP_001030727.1| argininosuccinate synthase [Methanocorpusculum labreanum Z]
 gi|124363652|gb|ABN07460.1| argininosuccinate synthase [Methanocorpusculum labreanum Z]
          Length = 402

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 59/212 (27%), Gaps = 14/212 (6%)

Query: 1   MNDIIKKAPS--ALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLC- 55
           M D  +K      +L FSGG D+S C+    +   +DRV T++ D GQ            
Sbjct: 1   MTDTNEKTGKGTVVLAFSGGLDTSICVPILKNMYGYDRVVTVAADVGQPESEVKMATDKG 60

Query: 56  --VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
             +  K        KD+  ++H+ P      +           +              N 
Sbjct: 61  NLIADK--HYTLDLKDAFVKNHVFPAIKANALYEGYPMGTSLARPIIAEEIVKIAKKENA 118

Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
             +    T      +    I          P   H+  R  E          + V     
Sbjct: 119 AAIGHGCTGKGNDQLRFDYIFRMHGFDIVAPMREHNMTREWEIDYAEQNNVPIPVKKSTP 178

Query: 174 WLKKYETWKLAQDIGGQDLVN-----LILEES 200
           W      W  + + G  +  +      I   +
Sbjct: 179 WSVDENIWSRSIEGGRLEEPDYHPPEEIYHWT 210


>gi|319440352|ref|ZP_07989508.1| argininosuccinate synthase [Corynebacterium variabile DSM 44702]
          Length = 400

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 19/52 (36%), Gaps = 3/52 (5%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCV 56
               +L +SGG D +T     L +     V  +S D GQ  +     R   
Sbjct: 1  MTDRVVLAYSGGLD-TTVAIPYLKQMTGGEVVAVSIDLGQGGEDMESVRQRA 51


>gi|317486830|ref|ZP_07945646.1| thiamine biosynthesis protein [Bilophila wadsworthia 3_1_6]
 gi|316921993|gb|EFV43263.1| thiamine biosynthesis protein [Bilophila wadsworthia 3_1_6]
          Length = 357

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 16/37 (43%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
          +    P A  LFSGG DS       +++   V  L F
Sbjct: 1  MNTSTPHAFALFSGGLDSILAARLIMEQGLVVRCLHF 37


>gi|301309337|ref|ZP_07215279.1| GMP synthase [Bacteroides sp. 20_3]
 gi|300832426|gb|EFK63054.1| GMP synthase [Bacteroides sp. 20_3]
          Length = 506

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 49/187 (26%), Gaps = 21/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D+G   K E E  +   + +       
Sbjct: 213 DKVILALSGGVDSSVTAVLLNKAIGKNLTCIFVDHGLLRKNEFENVMRDYEHLG------ 266

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                         L  I  ++  K                        VF         
Sbjct: 267 --------------LNVIGVNAKDKFYKELAGVTEPEKKRKIIGKGFIDVFDEEAHKLKD 312

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           I++      L    ++ +  PL  L K E  ++  ++
Sbjct: 313 IKWLGQGTIYPDVIESLSITGTVIKSHHNVGGLPDTMNLKLVEPLRLLFKDEVRRVGMEL 372

Query: 188 GGQDLVN 194
           G Q  + 
Sbjct: 373 GMQPHLI 379


>gi|289428353|ref|ZP_06430040.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Propionibacterium acnes J165]
 gi|289158502|gb|EFD06718.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Propionibacterium acnes J165]
 gi|332675520|gb|AEE72336.1| tRNA-specific 2-thiouridylase MnmA [Propionibacterium acnes 266]
          Length = 366

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/89 (12%), Positives = 23/89 (25%), Gaps = 12/89 (13%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS---------FDYGQR---NKVELECRLCVR 57
            L   SGG DS+   +  ++    V  +             G R   +  +        
Sbjct: 2  KVLAAMSGGVDSAVAAARLVEAGHDVTGVHLALSRNPRSHREGSRGCCSLEDSFDARRAA 61

Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDIS 86
           ++      W  S      +    + +  
Sbjct: 62 DRLGIPFYVWDFSDRFVAEVIDPFIAEYR 90


>gi|262383282|ref|ZP_06076418.1| glutamine-hydrolyzing GMP synthase [Bacteroides sp. 2_1_33B]
 gi|262294180|gb|EEY82112.1| glutamine-hydrolyzing GMP synthase [Bacteroides sp. 2_1_33B]
          Length = 506

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 49/187 (26%), Gaps = 21/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D+G   K E E  +   + +       
Sbjct: 213 DKVILALSGGVDSSVTAVLLNKAIGKNLTCIFVDHGLLRKNEFENVMRDYEHLG------ 266

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                         L  I  ++  K                        VF         
Sbjct: 267 --------------LNVIGVNAKDKFYKELAGVTEPEKKRKIIGKGFIDVFDEEAHKLKD 312

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           I++      L    ++ +  PL  L K E  ++  ++
Sbjct: 313 IKWLGQGTIYPDVIESLSITGTVIKSHHNVGGLPDTMNLKLVEPLRLLFKDEVRRVGMEL 372

Query: 188 GGQDLVN 194
           G Q  + 
Sbjct: 373 GMQPHLI 379


>gi|255014182|ref|ZP_05286308.1| GMP synthase [Bacteroides sp. 2_1_7]
          Length = 506

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 49/187 (26%), Gaps = 21/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D+G   K E E  +   + +       
Sbjct: 213 DKVILALSGGVDSSVTAVLLNKAIGKNLTCIFVDHGLLRKNEFENVMRDYEHLG------ 266

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                         L  I  ++  K                        VF         
Sbjct: 267 --------------LNVIGVNAKDKFYKELAGVTEPEKKRKIIGKGFIDVFDEEAHKLKD 312

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           I++      L    ++ +  PL  L K E  ++  ++
Sbjct: 313 IKWLGQGTIYPDVIESLSITGTVIKSHHNVGGLPDTMNLKLVEPLRLLFKDEVRRVGMEL 372

Query: 188 GGQDLVN 194
           G Q  + 
Sbjct: 373 GMQPHLI 379


>gi|150008447|ref|YP_001303190.1| GMP synthase [Parabacteroides distasonis ATCC 8503]
 gi|256841569|ref|ZP_05547076.1| GMP synthase domain-containing protein [Parabacteroides sp. D13]
 gi|298376302|ref|ZP_06986258.1| GMP synthase [Bacteroides sp. 3_1_19]
 gi|226739652|sp|A6LD04|GUAA_PARD8 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|149936871|gb|ABR43568.1| glutaminne-hydrolyzing GMP synthase [Parabacteroides distasonis
           ATCC 8503]
 gi|256737412|gb|EEU50739.1| GMP synthase domain-containing protein [Parabacteroides sp. D13]
 gi|298267339|gb|EFI08996.1| GMP synthase [Bacteroides sp. 3_1_19]
          Length = 506

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 49/187 (26%), Gaps = 21/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D+G   K E E  +   + +       
Sbjct: 213 DKVILALSGGVDSSVTAVLLNKAIGKNLTCIFVDHGLLRKNEFENVMRDYEHLG------ 266

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                         L  I  ++  K                        VF         
Sbjct: 267 --------------LNVIGVNAKDKFYKELAGVTEPEKKRKIIGKGFIDVFDEEAHKLKD 312

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G    D           I++      L    ++ +  PL  L K E  ++  ++
Sbjct: 313 IKWLGQGTIYPDVIESLSITGTVIKSHHNVGGLPDTMNLKLVEPLRLLFKDEVRRVGMEL 372

Query: 188 GGQDLVN 194
           G Q  + 
Sbjct: 373 GMQPHLI 379


>gi|57642102|ref|YP_184580.1| hypothetical protein TK2167 [Thermococcus kodakarensis KOD1]
 gi|57160426|dbj|BAD86356.1| 3'-phosphoadenosine 5'-phosphosulfate reductase, fused to
           N-terminal uncharacterized archaeal domain [Thermococcus
           kodakarensis KOD1]
          Length = 435

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 32/109 (29%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++ +SGG+DS+  L  A + F  V  +            E    +  K+   + +    +
Sbjct: 237 VVPWSGGKDSTAALILAKEAFGEVNAVYVRMEYEMPETEEYIEKLAGKLGVNLIRVDVPM 296

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +                 + +   + +   P   V  R+        
Sbjct: 297 PIEKFGMPTHRNRWCTKMKVEALYNAVSEFENPLLVVGDRDGESARRRL 345


>gi|319408158|emb|CBI81811.1| GMP synthase [Bartonella schoenbuchensis R1]
          Length = 518

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 53/185 (28%), Gaps = 18/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS       +   +++  +  D+G   K E      V     +    
Sbjct: 221 KGRVICGLSGGVDSSVTAILLHEAIGEQLTCIFVDHGLMRKNE---AEEVLTLFRDNYNI 277

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +   H    A+ G+       K +     +                      A  L
Sbjct: 278 KLVHVNAAHRFINALKGETDPEKKRKTIGRLFIEVFEEE-----------AKKVGGAQFL 326

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+  +         I++      L    ++ +  PL  L K +   L ++
Sbjct: 327 AQGTLYPDVIESISAVGDGIT---IKSHHNVGGLPERMNMQLVEPLRELFKDDVRSLGRE 383

Query: 187 IGGQD 191
           +G  +
Sbjct: 384 LGLPE 388


>gi|299146811|ref|ZP_07039879.1| tRNA(Ile)-lysidine synthase [Bacteroides sp. 3_1_23]
 gi|298517302|gb|EFI41183.1| tRNA(Ile)-lysidine synthase [Bacteroides sp. 3_1_23]
          Length = 426

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 52/191 (27%), Gaps = 23/191 (12%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +       L+  SGG DS   L          E    ++  R   E +      +++ E 
Sbjct: 15  LFSPDDKILVALSGGADSVALLYILHTAGYHCEAAHCNFHLR-GKESDRDELFVRQLCER 73

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           M        E H+  +        +    ++ M  ++      F   R        A   
Sbjct: 74  M--------EIHLHTIDFNTTQYATEKHISIEMAARE-LRYQWFEKIRKECQADVVAVAH 124

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           ++      ++                                 T+  PL+ + + E  + 
Sbjct: 125 HQDDSIETILLNLIRGTGITGLLGIRPRNG-------------TIVRPLLCINRKEIIRY 171

Query: 184 AQDIGGQDLVN 194
            Q+IG   + +
Sbjct: 172 LQNIGQDYVTD 182


>gi|312140300|ref|YP_004007636.1| sulfate adenylyltransferase subunit 2 cysd [Rhodococcus equi 103S]
 gi|325677126|ref|ZP_08156795.1| sulfate adenylyltransferase subunit 2 [Rhodococcus equi ATCC 33707]
 gi|311889639|emb|CBH48956.1| sulfate adenylyltransferase subunit 2 CysD [Rhodococcus equi 103S]
 gi|325552111|gb|EGD21804.1| sulfate adenylyltransferase subunit 2 [Rhodococcus equi ATCC 33707]
          Length = 313

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 49/180 (27%), Gaps = 17/180 (9%)

Query: 12  LLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++LFSGG+DS+  L  A+  F         L  D G      L+ R  V  K    +   
Sbjct: 44  VILFSGGKDSTVLLHLAIKAFWPAPLPFALLHVDTGHNLPEVLDFRDHVVAKYNLRLHVA 103

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           K             L D   +     +   +Q   L +     R       A     R  
Sbjct: 104 K---------VEDYLADGRLTERPDGIRNPLQTVPLLDAIAEHRFDAVFGGARRDEERAR 154

Query: 128 ITN-IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I               R +         + G +  V    PL    + + W+    
Sbjct: 155 AKERIFSLRNAFGQWDPKRQRPELWNLYNGRHSPGEQVRV---FPLSNFTELDIWRYIAR 211


>gi|208434941|ref|YP_002266607.1| GMP synthase [Helicobacter pylori G27]
 gi|226739631|sp|B5Z842|GUAA_HELPG RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|208432870|gb|ACI27741.1| GMP synthase [Helicobacter pylori G27]
          Length = 508

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 52/180 (28%), Gaps = 16/180 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DS+   +       D +  +  D+G   K E E    + K +     +  
Sbjct: 211 KVLCAVSGGVDSTVVATLLHRAIKDNLIAVFVDHGLLRKNEKERVQAMFKDL-----QIP 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  +   + L+ L  +S   L + +            F        L        ++  
Sbjct: 266 LNTIDAKGIFLSKLKGVSEPELKRKII----GETFIEVFEKEAKKHHLKG------KIEF 315

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   S         I+       L       +  PL  L K E   L +++G
Sbjct: 316 LAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEARLLGKELG 375


>gi|207092000|ref|ZP_03239787.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Helicobacter pylori HPKX_438_AG0C1]
 gi|207108158|ref|ZP_03242320.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Helicobacter pylori HPKX_438_CA4C1]
          Length = 508

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 55/182 (30%), Gaps = 20/182 (10%)

Query: 10  SALLLFSGGQDSS---TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             L   SGG DS+   T L  A+   D +  +  D+G   K E E    + K +     +
Sbjct: 211 KVLCAVSGGVDSTVVATLLYRAIK--DNLIAVFVDHGLLRKNEKERVQAMFKDL-----Q 263

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +  +   + L+ L  +S   L + +            F        L        ++
Sbjct: 264 IPLNTIDAKEVFLSKLKGVSEPELKRKII----GETFIEVFEKEAKKHHLKG------KI 313

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                     +   S         I+       L       +  PL  L K E   L ++
Sbjct: 314 EFLAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEARLLGKE 373

Query: 187 IG 188
           +G
Sbjct: 374 LG 375


>gi|251795808|ref|YP_003010539.1| PP-loop domain protein [Paenibacillus sp. JDR-2]
 gi|247543434|gb|ACT00453.1| PP-loop domain protein [Paenibacillus sp. JDR-2]
          Length = 267

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRK 58
          + DI+++  S ++ FSGG DS+  L  A++      V  ++ D       ELE    + K
Sbjct: 9  LQDILREMGSVVVAFSGGVDSTFLLKAAVETLGTGNVLAVTADSETYPTSELEEAKKLAK 68

Query: 59 KIVELMPKWK 68
          +I        
Sbjct: 69 QIRVQHEVIS 78


>gi|159897370|ref|YP_001543617.1| tRNA-specific 2-thiouridylase MnmA [Herpetosiphon aurantiacus ATCC
           23779]
 gi|205816856|sp|A9AYA7|MNMA_HERA2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|159890409|gb|ABX03489.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Herpetosiphon aurantiacus ATCC 23779]
          Length = 357

 Score = 44.9 bits (104), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 52/186 (27%), Gaps = 10/186 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS       ++   V  ++       +   +E + C  +          
Sbjct: 3   KIMVAMSGGVDSSLTAVLLKEQGHDVTGVTMHLWEGDDNGIMESQCCSVEMTAGARRVCA 62

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 ++             +      +      PN  +     +        A  LG 
Sbjct: 63  QYDIPYYVFN---YQKDFRKHVIDYFLREYSSGATPNPCLACNRDLKFRVLLERAELLGF 119

Query: 129 TNI----VIGVCETDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYETWK 182
             +     + +       Y   R   I   ++ +   L       +H PL    K +  +
Sbjct: 120 DGLATGHFVQITGGGEQPYDLRRGIDINKDQSYVLYMLSQRELGRLHFPLGGFTKPQVRQ 179

Query: 183 LAQDIG 188
           +A++ G
Sbjct: 180 MARERG 185


>gi|330468683|ref|YP_004406426.1| asparagine synthase [Verrucosispora maris AB-18-032]
 gi|328811654|gb|AEB45826.1| asparagine synthase (glutamine-hydrolyzing) [Verrucosispora maris
           AB-18-032]
          Length = 536

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 47/168 (27%), Gaps = 3/168 (1%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           ++ SGG DSS  L  A  R      ++   G  +  ++     +  ++       +    
Sbjct: 232 VVLSGGLDSSLVLLHAAQRHPDCVAVTV--GVPDSPDVAYARRLAGELGVRHEVVELRPR 289

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           +  +  +     IS  +   ++   +    +          + L    +     G     
Sbjct: 290 DIRLADVREAIRISELTEYGDIINAVVSVPIFRRLAELGVKVVLTGDGSDELFGGYPMYH 349

Query: 133 IGVCETDYSGY-PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
               +     +    R+     ++      M   V    P + L   E
Sbjct: 350 EVGPQAARRLFLHKIRNLCRTELQRVDRTSMGFGVEARVPFLDLALVE 397


>gi|307108123|gb|EFN56364.1| hypothetical protein CHLNCDRAFT_144859 [Chlorella variabilis]
          Length = 523

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 49/185 (26%), Gaps = 32/185 (17%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                +   SGG DS+   +  L   DR+  +  D G     E      V     + +  
Sbjct: 240 PTDHVICALSGGVDSTVAATLVL--GDRLHCVFVDNGLLRYKE---AERVMDTFNQHLHL 294

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                                         K+ D +     + G +       A  A  +
Sbjct: 295 ---------------------------PVCKVDDADRMLGRLKGLSDPEAKRKAIGAEFI 327

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
             T     +      G       TI++      L  +    +  PL  L K E   L + 
Sbjct: 328 DGTLYPDVIESCPPPGKGQKHSHTIKSHHNVGGLPEDLQFELIEPLRELFKDEVRSLGRL 387

Query: 187 IGGQD 191
           +G  +
Sbjct: 388 LGVPE 392


>gi|260173564|ref|ZP_05759976.1| putative cell-cycle protein [Bacteroides sp. D2]
 gi|315921832|ref|ZP_07918072.1| tRNA(Ile)-lysidine synthase [Bacteroides sp. D2]
 gi|313695707|gb|EFS32542.1| tRNA(Ile)-lysidine synthase [Bacteroides sp. D2]
          Length = 426

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 22/68 (32%), Gaps = 1/68 (1%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
          +       L+  SGG DS   L          E    ++  R   E +      +++ E 
Sbjct: 15 LFSPDDKILVALSGGADSVALLYILHTAGYHCEAAHCNFHLR-GKESDRDELFVRQLCER 73

Query: 64 MPKWKDSL 71
          M     ++
Sbjct: 74 MEIHLHTI 81


>gi|50842596|ref|YP_055823.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Propionibacterium acnes KPA171202]
 gi|289425475|ref|ZP_06427252.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Propionibacterium acnes SK187]
 gi|81611733|sp|Q6A8Q1|MNMA_PROAC RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|50840198|gb|AAT82865.1| probable tRNA
          (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Propionibacterium acnes KPA171202]
 gi|289154453|gb|EFD03141.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Propionibacterium acnes SK187]
          Length = 366

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 11/89 (12%), Positives = 23/89 (25%), Gaps = 12/89 (13%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS---------FDYGQR---NKVELECRLCVR 57
            L   SGG DS+   +  ++    V  +             G R   +  +        
Sbjct: 2  KVLAAMSGGVDSAVAAARLVEAGHDVTGVHLALSRNPRSHREGSRGCCSLEDSFDARRAA 61

Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDIS 86
           ++      W  S      +    + +  
Sbjct: 62 DRLGIPFYVWDFSDRFVAEVIDPFIAEYR 90


>gi|330503284|ref|YP_004380153.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas mendocina NK-01]
 gi|328917570|gb|AEB58401.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas mendocina NK-01]
          Length = 362

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 33/132 (25%), Gaps = 5/132 (3%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++  SGG DSS      +++  +VE L       +     C       + +         
Sbjct: 2   IVGMSGGVDSSVSALLLMEQGYQVEGLFMKNWDEDDGTEYC--TAMDDLADAQAVCDRIG 59

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
            + H        +   +     +A            +  R  I        A  LG   I
Sbjct: 60  IKLHT--ANFAAEYWDNVFEHFLAEYKAGRTPNPDILCNRE-IKFKAFLDYALSLGADLI 116

Query: 132 VIGVCETDYSGY 143
             G         
Sbjct: 117 ATGHYVRRRDID 128


>gi|253690509|ref|YP_003019699.1| argininosuccinate synthase [Pectobacterium carotovorum subsp.
          carotovorum PC1]
 gi|259585365|sp|C6DIG9|ASSY_PECCP RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|251757087|gb|ACT15163.1| argininosuccinate synthase [Pectobacterium carotovorum subsp.
          carotovorum PC1]
          Length = 448

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + E       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYEEIPRRAMEYGAENARLID 72


>gi|227328018|ref|ZP_03832042.1| argininosuccinate synthase [Pectobacterium carotovorum subsp.
          carotovorum WPP14]
          Length = 448

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + E       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYEEIPRRAMEYGAENARLID 72


>gi|227114477|ref|ZP_03828133.1| argininosuccinate synthase [Pectobacterium carotovorum subsp.
          brasiliensis PBR1692]
          Length = 448

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + E       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYEEIPRRAMEYGAENARLID 72


>gi|225077158|ref|ZP_03720357.1| hypothetical protein NEIFLAOT_02213 [Neisseria flavescens
           NRL30031/H210]
 gi|224951506|gb|EEG32715.1| hypothetical protein NEIFLAOT_02213 [Neisseria flavescens
           NRL30031/H210]
          Length = 367

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 48/191 (25%), Gaps = 11/191 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN       + ++  SGG DSS   +    +  ++  +     + +  +  C +      
Sbjct: 1   MN-TTNTPTNIIVGLSGGVDSSVTAALLKQQGHQISGVFMQNWEDDDNDEYCSIKQ---- 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +       +      + +         ++      +      PN  V     I      
Sbjct: 56  -DSFDAIAVADIIGIDIDIVNFAAQYKDNVFAYFLKEYSAGRTPNPDVLCNAEIKFKCFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A   G   I  G                              L          PL  L
Sbjct: 115 DYAIEQGADTIATGHYARKEVRNGVHYLLKGLDQNKDQSYFLYRLKPFQLERAIFPLGEL 174

Query: 176 KKYETWKLAQD 186
           +K E  +LA++
Sbjct: 175 EKPEVRRLAEE 185


>gi|255544898|ref|XP_002513510.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
           putative [Ricinus communis]
 gi|223547418|gb|EEF48913.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
           putative [Ricinus communis]
          Length = 497

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 39/187 (20%), Gaps = 8/187 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K      LL SGG DSS  L                   +   E     C  ++ ++   
Sbjct: 68  KNNLRIALLLSGGVDSSVALRLLHAAGHHCTAFYLKIWFQEDFENFWSECPWEEDLKYAK 127

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D +     +         +         +      P+     R        A     
Sbjct: 128 AVCDQVDIPLEVVHLTDEYWKNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAINNME 187

Query: 126 LGITNIVIGVCETDYSGYPDCRH--------DTIRAIETAINLGMESHVTVHTPLMWLKK 177
                          S     +                   +L       +  PL  + K
Sbjct: 188 FDYVASGHYAKVIHPSADEINQPSVLELSKDMVKDQTYFLSHLSQAQLRRLIFPLGGISK 247

Query: 178 YETWKLA 184
            E  KLA
Sbjct: 248 DEVRKLA 254


>gi|328354033|emb|CCA40430.1| hypothetical protein PP7435_Chr4-0255 [Pichia pastoris CBS 7435]
          Length = 517

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/182 (10%), Positives = 49/182 (26%), Gaps = 15/182 (8%)

Query: 13  LLFSGGQDSSTCLSWALDR------FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +  SGG DS    S              +  L+ ++  R     E          E+   
Sbjct: 27  ISLSGGVDSMALTSLLSRYRDEYNVGVEIVALTVNHEYRKGSRQEAE--------EVGKL 78

Query: 67  WKDSLGEDHILPLAI-LGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 +  I+ L   L  +    L     +                 I  +F       
Sbjct: 79  VAPLNVQHKIIDLKWNLDSVELHQLGNFERLARTKRYQHIQKYCYDYDIQHLFLGHQLED 138

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
              T ++     +   G    +  +           ++  + +  P++ ++K + +   +
Sbjct: 139 QVETFLLRLKQNSTIFGMRCMKDISSYPSLPLYPSSVKPPIKIVRPMLNIRKKDIYSYCR 198

Query: 186 DI 187
           ++
Sbjct: 199 EL 200


>gi|302307975|ref|NP_984774.2| AEL087Cp [Ashbya gossypii ATCC 10895]
 gi|299789248|gb|AAS52598.2| AEL087Cp [Ashbya gossypii ATCC 10895]
          Length = 410

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 55/196 (28%), Gaps = 12/196 (6%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKV---ELECRLCVRK 58
            +     + ++  SGG DSS C +     F +V  L   ++ Q +     E +   C  +
Sbjct: 21  RVPSTHDNIIVAMSGGVDSSVCAALYAH-FPKVRGLYMQNWSQTSGSGPVEGKAEPCYEQ 79

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
              ++             +       +           +    N             L  
Sbjct: 80  DWKDIEKVGAYLNIPVERVNFERDYWLDVFEPMLQRYQQGYTPNPDIGCNRFVKFGALRE 139

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI-------NLGMESHVTVHTP 171
                Y  G   +V G      S         +R+             +G E+   +  P
Sbjct: 140 HLDKEYGRGNYWLVTGHYARILSPQTRRETHLLRSHYAPKDQSYYLSQVGREALADLLMP 199

Query: 172 LMWLKKYETWKLAQDI 187
           + +L K E  + A ++
Sbjct: 200 MGFLTKPEVRQWAAEL 215


>gi|198275231|ref|ZP_03207762.1| hypothetical protein BACPLE_01390 [Bacteroides plebeius DSM 17135]
 gi|198271814|gb|EDY96084.1| hypothetical protein BACPLE_01390 [Bacteroides plebeius DSM 17135]
          Length = 517

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 51/187 (27%), Gaps = 21/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D+G   K              E     
Sbjct: 214 DKVVLGLSGGVDSSVAAVLLNKAIGKNLTCIFVDHGMLRK-------------NEFKNVL 260

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D       +      +   S L      + +   +   F+         F         
Sbjct: 261 HDYECLGLNVIGVDASEKFFSELAGVTEPERKRKIIGKGFIDV-------FDEEAHKIQD 313

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G    D           I++      L  + ++ +  PL  L K E  ++ +++
Sbjct: 314 VKWLAQGTIYPDCIESLSITGTVIKSHHNVGGLPEKMNLKLCEPLRLLFKDEVRRVGREL 373

Query: 188 GGQDLVN 194
           G  + + 
Sbjct: 374 GMPEHLI 380


>gi|169349710|ref|ZP_02866648.1| hypothetical protein CLOSPI_00448 [Clostridium spiroforme DSM 1552]
 gi|169293785|gb|EDS75918.1| hypothetical protein CLOSPI_00448 [Clostridium spiroforme DSM 1552]
          Length = 404

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 57/212 (26%), Gaps = 24/212 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L +SGG D++  + W  + +   V     D GQ+   EL+      KK      
Sbjct: 1   MKEKVILAYSGGLDTTAIIPWLKENYDYEVICCCIDVGQK--DELDGLEERAKKCGA-TK 57

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            +  ++ E+++                 V                   +       +A +
Sbjct: 58  LYIKNVVEEYVDDYI----------IPTVQADAVFEYKYLLGTATARPLIAKVLVDVARQ 107

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G + I  G                  A +  I              M  ++ E  +  +
Sbjct: 108 EGASAICHGATGKGNDQIRFELGIKALAPDLKIIAAWRDPNW----TMDSRESEI-EYCR 162

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
             G     ++      + Y   R+  +    G
Sbjct: 163 AHGIDLPFSVD-----SSYSRDRNIWHISHEG 189


>gi|30248125|ref|NP_840195.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Nitrosomonas europaea ATCC 19718]
 gi|44887949|sp|Q82XZ6|GUAA_NITEU RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|30180010|emb|CAD84005.1| guaA; GMP synthetase [Nitrosomonas europaea ATCC 19718]
          Length = 519

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 50/189 (26%), Gaps = 21/189 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +       D++  +  D G    + L     + +     +  
Sbjct: 221 NDKVVLGLSGGVDSSVAAALIHRAIGDQLVCVFVDNG---LLRLNEAKQIMETFSRNLAV 277

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +                        +K   +        GR  + +          
Sbjct: 278 NVIYIDAGRQFL---------------EQLKGITDPEQKRRTIGREFVEIFQQEAEKIEN 322

Query: 127 GITNIV--IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                   I     + +G    +   I++      L    H+ +  PL  L K E  +L 
Sbjct: 323 AKWLAQGTIYPDVIESAGSHTKKAGVIKSHHNVGGLPETLHLKLLEPLRELFKDEVRELG 382

Query: 185 QDIGGQDLV 193
             +G    +
Sbjct: 383 LALGLPHDL 391


>gi|333030074|ref|ZP_08458135.1| GMP synthase (glutamine-hydrolyzing) [Bacteroides coprosuis DSM
           18011]
 gi|332740671|gb|EGJ71153.1| GMP synthase (glutamine-hydrolyzing) [Bacteroides coprosuis DSM
           18011]
          Length = 507

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 53/187 (28%), Gaps = 21/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D+G                   L+ K 
Sbjct: 214 DKVVLALSGGVDSSVAAVLLNKAIGKNLTCVFVDHG-------------------LLRKD 254

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +          L +      +S      +    +      + G+  I +        +  
Sbjct: 255 EFKNVLHDYECLGLNVIGVDASKKFYSELAGVTDPEQKRKIIGKGFIDVFDVEAHKIQ-D 313

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G    D           I++      L  +  + +  PL  L K E  ++ +++
Sbjct: 314 VKWLAQGTIYPDVIESLSITGTVIKSHHNVGGLPEKMDLKLCEPLRLLFKDEVRRVGREM 373

Query: 188 GGQDLVN 194
           G  + + 
Sbjct: 374 GMPEHLI 380


>gi|333029643|ref|ZP_08457704.1| tRNA-specific 2-thiouridylase mnmA [Bacteroides coprosuis DSM
           18011]
 gi|332740240|gb|EGJ70722.1| tRNA-specific 2-thiouridylase mnmA [Bacteroides coprosuis DSM
           18011]
          Length = 356

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 49/175 (28%), Gaps = 7/175 (4%)

Query: 14  LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
           L SGG DSS  +    ++  + +      G  +K  + C     + I       +     
Sbjct: 7   LLSGGVDSSVVVHLLCEQGFKPDLFYIKIGMDDKEYMGCS--AEEDIELAQATARKYGLT 64

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
             ++ L    +   S +   +    +        +  + I F  F   + Y+   T    
Sbjct: 65  LDVIDLQ--QEYWDSVVKYTIEKVSKGYTPNPDVMCNKLIKFGCFEEKVGYQYDFTATGH 122

Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLAQ 185
                                +    L     + V     PL  L K+E   +A 
Sbjct: 123 YASTHCIDDQTWLGTAKDPLKDQTDFLAQIDKLQVSKLMFPLGNLMKHEVRDIAL 177


>gi|325968952|ref|YP_004245144.1| GMP synthase domain protein [Vulcanisaeta moutnovskia 768-28]
 gi|323708155|gb|ADY01642.1| GMP synthase domain protein [Vulcanisaeta moutnovskia 768-28]
          Length = 380

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 50/181 (27%), Gaps = 22/181 (12%)

Query: 11  ALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           AL   SGG DS+T          DR+  +  D G     E E    + + ++ L      
Sbjct: 27  ALAAISGGVDSTTAAILTRRIIGDRLRAVFIDTGFMRLNEPEHIKEILRAVLPLEIINAS 86

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 +L L+                              R + + V +          
Sbjct: 87  DRFYREMLGLSDA---------------------EEKRTRFREVFYTVLSEIAKEYDCDW 125

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +           +       +  I+   +    +  PL  L K +  +LA+ +G 
Sbjct: 126 LVQGTIAPDWIETRGGIKTQHNVLEQVGIDTASKYGFKLIEPLKDLYKDQVRELAKSLGV 185

Query: 190 Q 190
            
Sbjct: 186 P 186


>gi|315427307|dbj|BAJ48918.1| GMP synthase (glutamine-hydrolysing) [Candidatus Caldiarchaeum
           subterraneum]
 gi|315428189|dbj|BAJ49773.1| GMP synthase (glutamine-hydrolysing) [Candidatus Caldiarchaeum
           subterraneum]
          Length = 510

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 55/187 (29%), Gaps = 17/187 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DS+   +        R++ L  ++G   K E E  L   +KIV     
Sbjct: 212 PGRVLCAVSGGIDSTVTAAIVSKAVGKRLKCLFVNHGLLRKNEPEKVLETLRKIVGEDNI 271

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 E  +  L  +             +  ++               +  A      L
Sbjct: 272 IYIDASERFLNRLRGV-------------VDPEEKRRIIGHEFAAIFEEVSKAYGPFTHL 318

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E   SG        I+       +     + +  PL  L K E  +LA+ 
Sbjct: 319 AQGTLYPDVVE---SGKSVGGSAVIKTHHNVGGMPQNFGMKLVEPLRELYKDEVRQLAEM 375

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 376 MGLPRWL 382


>gi|254786599|ref|YP_003074028.1| GMP synthase [Teredinibacter turnerae T7901]
 gi|259647690|sp|C5BLU3|GUAA_TERTT RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|237687074|gb|ACR14338.1| GMP synthase (glutamine-hydrolyzing) [Teredinibacter turnerae
           T7901]
          Length = 525

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 55/185 (29%), Gaps = 19/185 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMP 65
           +   LL  SGG DSS   +       D++  +  D G  R +   +      K +   + 
Sbjct: 227 SDKVLLGLSGGVDSSVVAALLHRAIGDQLTCVFVDNGLLRKQEGDQVMDMFAKNMGVKVV 286

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +          L L+ L  I+     + +                +N+ +L         
Sbjct: 287 RADAED-----LFLSKLHGINDPEQKRKIIGNTFIEVFDTEAAKLQNVKWLAQGTIY--- 338

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                        + +     +   I++      L  +    +  PL  L K E  K+  
Sbjct: 339 ---------PDVIESAASKTGKAHVIKSHHNVGGLPEDMQFELVEPLRELFKDEVRKIGL 389

Query: 186 DIGGQ 190
           ++G  
Sbjct: 390 ELGLP 394


>gi|222528237|ref|YP_002572119.1| PP-loop domain-containing protein [Caldicellulosiruptor bescii
          DSM 6725]
 gi|222455084|gb|ACM59346.1| PP-loop domain protein [Caldicellulosiruptor bescii DSM 6725]
          Length = 301

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 17/47 (36%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE 49
           +  K    L++ SGG+DS             V  +  + G  +  +
Sbjct: 42 KMFDKKDKILVVISGGKDSMALWHILASEGYNVTGMYINLGIGHYSD 88


>gi|163816638|ref|ZP_02208001.1| hypothetical protein COPEUT_02828 [Coprococcus eutactus ATCC 27759]
 gi|158447895|gb|EDP24890.1| hypothetical protein COPEUT_02828 [Coprococcus eutactus ATCC 27759]
 gi|295093008|emb|CBK82099.1| argininosuccinate synthase [Coprococcus sp. ART55/1]
          Length = 412

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 58/211 (27%), Gaps = 24/211 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L +SGG D++  + W  +     V     D GQ +++E              + +
Sbjct: 3   KEKVVLAYSGGLDTTAIIPWLKETYGYDVICACIDVGQESELEG-------------LDE 49

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G + +  + ++ ++    +   V       N           I       +A + 
Sbjct: 50  RAKYSGAEKLYIIDVVDELCDEYIMPTVQADAVYENKYLLGTSFARPIIAKKLVEVARKE 109

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   I  G                  A +  +                  + +     + 
Sbjct: 110 GAVAICHGATGKGNDQLRFELSIKALAPDIKVIATWRQPEWTMQ-----SREDEIAFCKA 164

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
            G    ++L  +  H+ Y   R+  +    G
Sbjct: 165 HG----IDLPFDAKHS-YSRDRNIWHISHEG 190


>gi|92119082|ref|YP_578811.1| argininosuccinate synthase [Nitrobacter hamburgensis X14]
 gi|119361296|sp|Q1QHE6|ASSY_NITHX RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|91801976|gb|ABE64351.1| argininosuccinate synthase [Nitrobacter hamburgensis X14]
          Length = 409

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 4/80 (5%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKI-- 60
          + KK    +L +SGG D+S  L W        V T + D GQ  ++E   +  +   I  
Sbjct: 1  MSKKVEKVVLAYSGGLDTSIILKWLQTTYGAEVVTFTADLGQGEELEPARQKALLLGIKP 60

Query: 61 -VELMPKWKDSLGEDHILPL 79
              +   ++    D++ P+
Sbjct: 61 ENIFIEDLREEFVRDYVFPM 80


>gi|88855466|ref|ZP_01130130.1| argininosuccinate synthase [marine actinobacterium PHSC20C1]
 gi|88815373|gb|EAR25231.1| argininosuccinate synthase [marine actinobacterium PHSC20C1]
          Length = 399

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRK 58
           +   +L +SGG D+S  + W        V  L+ D GQ  +   + R     
Sbjct: 1  MSERVVLAYSGGLDTSVGIGWLKDATGKEVVALAIDVGQGGENMDDIRQRALD 53


>gi|262305999|gb|ACY45592.1| gln amidotransferase [Armillifer armillatus]
          Length = 196

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 27/78 (34%), Gaps = 5/78 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K    L+  SGG DSS C +        +++  L  D G   K E      V K + +L 
Sbjct: 42  KDRKVLVFLSGGVDSSVCAALLYKALPPNQIIALHIDNGFLRKRE---SKSVEKMMCDLR 98

Query: 65  PKWKDSLGEDHILPLAIL 82
            + K        L     
Sbjct: 99  LELKVVKAGHIFLNSTTW 116


>gi|300022358|ref|YP_003754969.1| GMP synthase, large subunit [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299524179|gb|ADJ22648.1| GMP synthase, large subunit [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 515

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 52/185 (28%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DS+       +   D++  +  D+G     E         ++V L   
Sbjct: 217 NGRVICGLSGGVDSAVAAVLIHEAIGDQLTCVFVDHGLMRLGE-------ADEVVGLFRD 269

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +              +   ++L      + +   +   F+                  
Sbjct: 270 HYNIPLVH-----VDASEQFLTALDGVSDPETKRKTIGKHFIDVFEAEAKKIGGADFLAQ 324

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G           +   +      TI++      L    H+ +  PL  L K E   L ++
Sbjct: 325 GTLY----PDVIESVSFTGGPSVTIKSHHNVGGLPERMHMKLVEPLRELFKDEVRALGRE 380

Query: 187 IGGQD 191
           +G  +
Sbjct: 381 LGLPE 385


>gi|124026416|ref|YP_001015531.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prochlorococcus marinus str. NATL1A]
 gi|205816901|sp|A2C457|MNMA_PROM1 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|123961484|gb|ABM76267.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prochlorococcus marinus str. NATL1A]
          Length = 404

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 32/118 (27%), Gaps = 9/118 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           S ++  SGG DSS   +        VE L+        +      C    +V+       
Sbjct: 38  SVVVGLSGGVDSSLTAALLCKAGWDVEGLTL------WLMKGKGSCCSDGLVDAAGICDQ 91

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              + HI+      +I    +  NV    ++   P         +             
Sbjct: 92  LGIKHHIVDS---KEIFQKEIINNVLKGYEEGITPLPCSRCNKSVKFSEMLKWVKENK 146


>gi|222054594|ref|YP_002536956.1| NAD+ synthetase [Geobacter sp. FRC-32]
 gi|221563883|gb|ACM19855.1| NAD+ synthetase [Geobacter sp. FRC-32]
          Length = 274

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 19/60 (31%), Gaps = 2/60 (3%)

Query: 10 SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           A+L  SGG DS+     A +    + V   +  Y   N         + + +       
Sbjct: 31 RAVLGLSGGIDSALVAYLAAEALGAENVYACTMPYRTSNPESEAHARLIAEDLGINYQVI 90


>gi|29336963|sp|Q9K4Z3|ASSY_MORPR RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|8671265|emb|CAB95017.1| argininosuccinate synthetase [Moritella profunda]
          Length = 404

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF--DYGQRNKVELECRLCV 56
           + +     ++ +SGG D+S  L W  + +D  E ++F  D GQ  +         
Sbjct: 2  KMTQTVKKVVVAYSGGLDTSVILPWLQENYDNCEIVAFVADVGQGAEELEGIEAKA 57


>gi|223936336|ref|ZP_03628248.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [bacterium Ellin514]
 gi|223894854|gb|EEF61303.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [bacterium Ellin514]
          Length = 349

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 54/181 (29%), Gaps = 11/181 (6%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKWKDSLGE 73
            SGG DSS   +  L++   V  ++     Q      E + C  + +++           
Sbjct: 1   MSGGVDSSAAAALLLEQGYDVIGITLKLWPQDCVNRAEDKCCGPQAVMDARSVSNKLGIP 60

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
            +++  +         +    A + +    PN  V     +      + A +LG   I  
Sbjct: 61  YYLVDES---ADFQKQVIGYFAEEYKAGRTPNPCVMCNEKLKFGTLISRAQQLGAEYIAT 117

Query: 134 GV-------CETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G         +         R           +L  +       PL  L K +T  +A+ 
Sbjct: 118 GHFARTEKSADGSRMLLKRGRDPRKDQSYFLFSLRQDQLARTIFPLGQLTKTDTRTVARQ 177

Query: 187 I 187
            
Sbjct: 178 C 178


>gi|218681025|ref|ZP_03528922.1| argininosuccinate synthase [Rhizobium etli CIAT 894]
          Length = 407

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 45/154 (29%), Gaps = 7/154 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K     +L +SGG D+S  L W        V T + D GQ  ++E        +K  E++
Sbjct: 5   KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEP------ARKKAEML 58

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +  + +     +         +      + +   ++    +    I         A 
Sbjct: 59  GIKEIYIEDVREEFVRDFVFPMFRANAVYEGVYLLGTSIARPLISKHLIDIARKTGADAI 118

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI 158
             G T         + S Y       I A     
Sbjct: 119 AHGATGKGNDQVRFELSAYALNPDIKIIAPWRDW 152


>gi|218516022|ref|ZP_03512862.1| argininosuccinate synthase [Rhizobium etli 8C-3]
          Length = 258

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 45/154 (29%), Gaps = 7/154 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K     +L +SGG D+S  L W        V T + D GQ  ++E        +K  E++
Sbjct: 22  KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEP------ARKKAEML 75

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +  + +     +         +      + +   ++    +    I         A 
Sbjct: 76  GIKEIYIEDVREEFVRDFVFPMFRANAVYEGVYLLGTSIARPLISKHLIDIARKTGADAI 135

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI 158
             G T         + S Y       I A     
Sbjct: 136 AHGATGKGNDQVRFELSAYALNPDIKIIAPWRDW 169


>gi|218507247|ref|ZP_03505125.1| argininosuccinate synthase [Rhizobium etli Brasil 5]
          Length = 219

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 45/154 (29%), Gaps = 7/154 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K     +L +SGG D+S  L W        V T + D GQ  ++E        +K  E++
Sbjct: 5   KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEP------ARKKAEML 58

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +  + +     +         +      + +   ++    +    I         A 
Sbjct: 59  GIKEIYIEDVREEFVRDFVFPMFRANAVYEGVYLLGTSIARPLISKHLIDIARKTGADAI 118

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI 158
             G T         + S Y       I A     
Sbjct: 119 AHGATGKGNDQVRFELSAYALNPDIKIIAPWRDW 152


>gi|190893772|ref|YP_001980314.1| argininosuccinate synthase [Rhizobium etli CIAT 652]
 gi|190699051|gb|ACE93136.1| argininosuccinate synthase protein [Rhizobium etli CIAT 652]
 gi|327188860|gb|EGE56052.1| argininosuccinate synthase protein [Rhizobium etli CNPAF512]
          Length = 407

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 45/154 (29%), Gaps = 7/154 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K     +L +SGG D+S  L W        V T + D GQ  ++E        +K  E++
Sbjct: 5   KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEP------ARKKAEML 58

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +  + +     +         +      + +   ++    +    I         A 
Sbjct: 59  GIKEIYIEDVREEFVRDFVFPMFRANAVYEGVYLLGTSIARPLISKHLIDIARKTGADAI 118

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI 158
             G T         + S Y       I A     
Sbjct: 119 AHGATGKGNDQVRFELSAYALNPDIKIIAPWRDW 152


>gi|209551290|ref|YP_002283207.1| argininosuccinate synthase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209537046|gb|ACI56981.1| Argininosuccinate synthase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 407

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 45/154 (29%), Gaps = 7/154 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K     +L +SGG D+S  L W        V T + D GQ  ++E        +K  E++
Sbjct: 5   KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEP------ARKKAEML 58

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +  + +     +         +      + +   ++    +    I         A 
Sbjct: 59  GIKEIYIEDVREEFVRDFVFPMFRANAVYEGVYLLGTSIARPLISKHLIDIARKTGADAI 118

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI 158
             G T         + S Y       I A     
Sbjct: 119 AHGATGKGNDQVRFELSAYALNPDIKIIAPWRDW 152


>gi|86359504|ref|YP_471396.1| argininosuccinate synthase [Rhizobium etli CFN 42]
 gi|119361313|sp|Q2K3B7|ASSY_RHIEC RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|86283606|gb|ABC92669.1| argininosuccinate synthase protein [Rhizobium etli CFN 42]
          Length = 407

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 45/154 (29%), Gaps = 7/154 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K     +L +SGG D+S  L W        V T + D GQ  ++E        +K  E++
Sbjct: 5   KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEP------ARKKAEML 58

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +  + +     +         +      + +   ++    +    I         A 
Sbjct: 59  GIKEIYIEDVREEFVRDFVFPMFRANAVYEGVYLLGTSIARPLISKHLIDIARKTGADAI 118

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI 158
             G T         + S Y       I A     
Sbjct: 119 AHGATGKGNDQVRFELSAYALNPDIKIIAPWRDW 152


>gi|15966962|ref|NP_387315.1| argininosuccinate synthase [Sinorhizobium meliloti 1021]
 gi|307301735|ref|ZP_07581494.1| argininosuccinate synthase [Sinorhizobium meliloti BL225C]
 gi|307316240|ref|ZP_07595684.1| argininosuccinate synthase [Sinorhizobium meliloti AK83]
 gi|24211519|sp|Q92L73|ASSY_RHIME RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|15076235|emb|CAC47788.1| Probable argininosuccinate synthase [Sinorhizobium meliloti 1021]
 gi|306898080|gb|EFN28822.1| argininosuccinate synthase [Sinorhizobium meliloti AK83]
 gi|306903433|gb|EFN34022.1| argininosuccinate synthase [Sinorhizobium meliloti BL225C]
          Length = 405

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 45/154 (29%), Gaps = 7/154 (4%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K     +L +SGG D+S  L W        V T + D GQ  ++E        +K  E++
Sbjct: 5   KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEP------ARKKAEML 58

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +  + +     +         +      + +   ++    +    I         A 
Sbjct: 59  GIKEIYIEDVREEFVRDFVFPMFRANAVYEGVYLLGTSIARPLISKHLIDIARKTGADAI 118

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI 158
             G T         + S Y       I A     
Sbjct: 119 AHGATGKGNDQVRFELSAYALNPDIKIIAPWRDW 152


>gi|307947086|ref|ZP_07662421.1| GMP synthase [Roseibium sp. TrichSKD4]
 gi|307770750|gb|EFO29976.1| GMP synthase [Roseibium sp. TrichSKD4]
          Length = 516

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 58/184 (31%), Gaps = 17/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS       +   D++  +  D+G   + E        +++V +    
Sbjct: 219 KKVICGLSGGVDSSVAAVLIHEAIGDQLTCVFVDHGLLRQGE-------AEEVVTMFRDH 271

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +            LG +   S   +   K +        V  ++   +  A  LA    
Sbjct: 272 YNMQLIHADEQDLFLGALEGVS---DPEEKRKTIGRLFIDVFQKHANEIDGAEFLAQGTL 328

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +++  V  +             ++      L  +  + +  PL  L K E  +L  ++
Sbjct: 329 YPDVIESVSFSGGPSVTI------KSHHNVGGLPEKMGLKLVEPLRELFKDEVRRLGVEL 382

Query: 188 GGQD 191
           G   
Sbjct: 383 GLPK 386


>gi|297544017|ref|YP_003676319.1| PP-loop domain-containing protein [Thermoanaerobacter mathranii
          subsp. mathranii str. A3]
 gi|296841792|gb|ADH60308.1| PP-loop domain protein [Thermoanaerobacter mathranii subsp.
          mathranii str. A3]
          Length = 300

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 22/61 (36%), Gaps = 2/61 (3%)

Query: 2  NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
          N + +K    L++ SGG+DS       +     V  +  + G            V +K  
Sbjct: 41 NRMFEKGEKVLVVVSGGKDSMALWDILVKEGYNVVAMYINLGIGEYSN--RSQEVVEKFA 98

Query: 62 E 62
          +
Sbjct: 99 K 99


>gi|241758623|ref|ZP_04756737.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria flavescens SK114]
 gi|241321134|gb|EER57330.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria flavescens SK114]
          Length = 367

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 48/191 (25%), Gaps = 11/191 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN       + ++  SGG DSS   +    +  ++  +     + +  +  C +      
Sbjct: 1   MN-TTNTPTNIIVGLSGGVDSSVTAALLKQQGHQISGVFMQNWEDDDNDEYCSIKQ---- 55

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +       +      + +         ++      +      PN  V     I      
Sbjct: 56  -DSFDAIAVADIIGIDIDIVNFAAQYKDNVFAYFLKEYSAGRTPNPDVLCNAEIKFKCFL 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWL 175
             A   G   I  G                              L          PL  L
Sbjct: 115 DYAIEQGADTIATGHYARKEVRNGVHYLLKGLDQNKDQSYFLYRLKPFQLERAIFPLGEL 174

Query: 176 KKYETWKLAQD 186
           +K E  +LA++
Sbjct: 175 EKPEVRRLAEE 185


>gi|217957639|ref|YP_002336181.1| tRNA(Ile)-lysidine synthetase [Bacillus cereus AH187]
 gi|217067016|gb|ACJ81266.1| tRNA(Ile)-lysidine synthetase [Bacillus cereus AH187]
          Length = 476

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 53/197 (26%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSW-----ALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           D++K+  + ++  SGG DS   L +     A  +F+ V     D    +    +      
Sbjct: 17  DVLKERSTIVVGVSGGPDSVALLYYLLEKRAAKQFEIVVA-HVD----HMFRGDESHEDL 71

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           + + +L  +         I           ++       +             R  + L 
Sbjct: 72  QFVQDLCKELGVICETIRINVSQYQQQYGMNAQVAARECRYAFLERIMKKYDAR-YVALG 130

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                     +  +V G     Y+G    R                    +  PL+ + K
Sbjct: 131 HHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNG--------------YLIRPLLGVTK 176

Query: 178 YETWKLAQDIGGQDLVN 194
            E       +     ++
Sbjct: 177 EEIVDYCHKLKIIPRID 193


>gi|47223564|emb|CAF99173.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 411

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + +L +SGG D+S  L W  ++   V T   + GQ    + +      + +  
Sbjct: 4  TVVLAYSGGLDTSCILVWLKEQGYDVITFLANVGQD--EDFKAAKEKAETLGA 54


>gi|15899931|ref|NP_344536.1| GMP synthase PP-ATPase subunit [Sulfolobus solfataricus P2]
 gi|284173893|ref|ZP_06387862.1| GMP synthase PP-ATPase subunit [Sulfolobus solfataricus 98/2]
 gi|44887908|sp|Q97TZ8|GUAAB_SULSO RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
           AltName: Full=GMP synthetase
 gi|13816676|gb|AAK43326.1| GMP synthase, PP-ATPase domain (guaA) [Sulfolobus solfataricus P2]
 gi|261601607|gb|ACX91210.1| GMP synthase (glutamine-hydrolyzing) [Sulfolobus solfataricus 98/2]
          Length = 367

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 38/121 (31%), Gaps = 4/121 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DS+T    A +   D+V  +  D G   K E      ++  +  ++P 
Sbjct: 21  NEKVLAAVSGGVDSTTAAVLAYNLLGDKVIPVLVDTGFLRKNE---AEKIKDYLSNILPN 77

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 ++  +      D +     +   +     +        R ++    AA      
Sbjct: 78  LIIVDKKETFISEIEGIDDAEMKRKRFRELFYSTISSLMKKFNARYLMQGTIAADWVETQ 137

Query: 127 G 127
           G
Sbjct: 138 G 138


>gi|332198668|gb|EGJ12751.1| tRNA(Ile)-lysidine synthetase [Streptococcus pneumoniae GA41317]
          Length = 425

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 47/173 (27%), Gaps = 11/173 (6%)

Query: 6   KKAPSALLLFSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKI 60
           KK   A+L  SGG DS        ++  +    +     ++ QR +    E  L      
Sbjct: 17  KKHAKAVLALSGGLDSMFLFKVLSTYQKELEIELILAHVNHKQRIESDWEEKELRKLAAE 76

Query: 61  VELMPKWKDSLGED-----HILPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            EL     +  GE               ++   +  T  V     D+ +    +      
Sbjct: 77  AELPIYISNFSGEFSEARARNFRYDFFQEVMKKTGATALVTAHHADDQVETILMRLIRGT 136

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
            L + + +  +  +  I I      +                  N    + + 
Sbjct: 137 RLRYLSGIKEKQVVGEIEIIRPFLHFKKKDFPSIFHFEDTSNQENHYFRNRIR 189


>gi|332299754|ref|YP_004441675.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Porphyromonas asaccharolytica DSM 20707]
 gi|332176817|gb|AEE12507.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Porphyromonas asaccharolytica DSM 20707]
          Length = 379

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 23/176 (13%), Positives = 48/176 (27%), Gaps = 2/176 (1%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           LL SGG DSS  +   ++   R +      G +++          + I  +    +    
Sbjct: 20  LLASGGVDSSVAMHLLVEAGFRPDLYYIRIGMQDEDGGYLDCPAEEDIELVTLLARRYDL 79

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI--TN 130
              ++ L  L      + T +   +    N                 +  +Y        
Sbjct: 80  HLEVIDLHKLYWDRVVAYTMDAVRRGLTPNPDVMCNKLIKFGAFEERSGSSYDYIATGHY 139

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
             I       +             +    +G      +  P+  L K E  ++A +
Sbjct: 140 ATIRKTAEGLTFLGTSPDPVKDQTDFLAQIGFRQMERLLFPIGHLPKEEVRRIALE 195


>gi|302866860|ref|YP_003835497.1| argininosuccinate synthase [Micromonospora aurantiaca ATCC 27029]
 gi|302569719|gb|ADL45921.1| argininosuccinate synthase [Micromonospora aurantiaca ATCC 27029]
          Length = 401

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 19/53 (35%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
               +L +SGG D+S  +   A      V  ++ D GQ  +     R     
Sbjct: 1  MTERVVLAYSGGLDTSVAIPYLAERTGAEVIAVAVDVGQGGEDMTVIRQRALD 53


>gi|240167851|ref|ZP_04746510.1| GMP synthase [Mycobacterium kansasii ATCC 12478]
          Length = 518

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 50/184 (27%), Gaps = 16/184 (8%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A+   SGG DS+   +       DR+  +  D+G      L       +   + +     
Sbjct: 221 AICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHG------LLRAGERAQVERDFVAATGA 274

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +L     +  A     + S ++     +                  L          G  
Sbjct: 275 NLV---TVDAADTFLAALSGVSNPEGKRKIIGRQFIRAFESAVRDVLDGREVEFLVQGTL 331

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
              +                 I++      L  +    +  PL  L K E   + +++G 
Sbjct: 332 YPDVVESGGGSGTA------NIKSHHNVGGLPGDLKFKLVEPLRLLFKDEVRAVGRELGL 385

Query: 190 QDLV 193
            + +
Sbjct: 386 PEEI 389


>gi|229489580|ref|ZP_04383443.1| GMP synthase [Rhodococcus erythropolis SK121]
 gi|229323677|gb|EEN89435.1| GMP synthase [Rhodococcus erythropolis SK121]
          Length = 523

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 50/184 (27%), Gaps = 11/184 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A+   SGG DS+   +       DR+  +  D+G     E                    
Sbjct: 221 AICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLMRAGERTQVEQ---------DFVAA 271

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +      +  A       + +T   A +            G     L   A+    +   
Sbjct: 272 TGARLITVDAADTFIGELAGVTDPEAKRKIIGREFIRSFEGAVSDVLGENASHGATVD-F 330

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +    +  PL  L K E   + +++G 
Sbjct: 331 LVQGTLYPDVVESGGGTGTANIKSHHNVGGLPEDLQFKLVEPLRLLFKDEVRAVGRELGL 390

Query: 190 QDLV 193
            + +
Sbjct: 391 PEEI 394


>gi|168988983|pdb|2NZ2|A Chain A, Crystal Structure Of Human Argininosuccinate Synthase In
          Complex With Aspartate And Citrulline
          Length = 404

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC 52
            S +L +SGG D+S  L W  ++   V     + GQ+   E   
Sbjct: 1  KGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEAR 45


>gi|167746538|ref|ZP_02418665.1| hypothetical protein ANACAC_01248 [Anaerostipes caccae DSM 14662]
 gi|317471357|ref|ZP_07930712.1| arginosuccinate synthase [Anaerostipes sp. 3_2_56FAA]
 gi|167653498|gb|EDR97627.1| hypothetical protein ANACAC_01248 [Anaerostipes caccae DSM 14662]
 gi|316901163|gb|EFV23122.1| arginosuccinate synthase [Anaerostipes sp. 3_2_56FAA]
          Length = 405

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/214 (11%), Positives = 60/214 (28%), Gaps = 27/214 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L +SGG D++  + W  + +   V     D GQ N+++         K+     
Sbjct: 1   MKEKVVLAYSGGLDTTAIIPWLKENYDYEVICCCVDVGQGNELDGLEERA---KLSGATR 57

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            + + + ++ +             +   V       N           +       +A +
Sbjct: 58  LYIEDVVDEFVDDY----------VIPTVKADAVYENKYLLGTSFARPVIAKKLVEVARK 107

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK--KYETWKL 183
            G   I  G                 +       + +   + +  P   L   K ++ + 
Sbjct: 108 EGAVAICHGATGKG----------NDQIRFELSIMALAPDIKIIAPWRELDTWKMDSRED 157

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
                    ++L     ++ Y   R+  +    G
Sbjct: 158 EIQYCKDHGIDLPFSAENS-YSRDRNLWHISHEG 190


>gi|168038711|ref|XP_001771843.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162676794|gb|EDQ63272.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 421

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 33/123 (26%), Gaps = 2/123 (1%)

Query: 16  SGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDH 75
           SGG DSS        +   V  +        + E     C   +  E   +  + L    
Sbjct: 45  SGGVDSSIAALLLQRQGYEVFGVYMR-NWDARDEAGGGHCSADQDYEDAQRVCEHLAGIK 103

Query: 76  ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGV 135
           +  L        + + +N   K      PN  +     I        A ++G      G 
Sbjct: 104 LHHLDYQKKYW-TQVFENFTQKFAMGLTPNPDLDCNQHIKFDALLENALQMGADKFATGH 162

Query: 136 CET 138
              
Sbjct: 163 YAR 165


>gi|145638685|ref|ZP_01794294.1| pyridoxine kinase [Haemophilus influenzae PittII]
 gi|145272280|gb|EDK12188.1| pyridoxine kinase [Haemophilus influenzae PittII]
          Length = 430

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 25/68 (36%), Gaps = 3/68 (4%)

Query: 12 LLLFSGGQDSSTCL---SWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
          L+  SGG DS+  L   +    +   +  LS      +    +   C  K   +L  + +
Sbjct: 20 LIALSGGLDSTVLLSLFAKLRQKQPHLPPLSIRAIHIHHGLSQNADCWAKHCQDLCDQLQ 79

Query: 69 DSLGEDHI 76
            L  + +
Sbjct: 80 IPLIIERV 87


>gi|85375169|ref|YP_459231.1| GMP synthase [Erythrobacter litoralis HTCC2594]
 gi|84788252|gb|ABC64434.1| GMP synthase [Erythrobacter litoralis HTCC2594]
          Length = 524

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 59/183 (32%), Gaps = 17/183 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+       +   +++  +  D+G   + E        +++V L     
Sbjct: 228 KVICGLSGGVDSAVAAVLIHEAIGEQLTCVFVDHGLMRQGE-------AEQVVSLFRGHY 280

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +            LG ++  +  +     I    +       R I         A  L  
Sbjct: 281 NIPLVHVDAEDMFLGGLAGVTDPEKKRKFIGGAFIDLFEEEARKI-------GGADFLAQ 333

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+    +      TI++      L    ++ +  PL  L K E   L +++G
Sbjct: 334 GTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMNMQLVEPLRELFKDEVRALGRELG 391

Query: 189 GQD 191
             D
Sbjct: 392 LPD 394


>gi|34558468|ref|NP_908283.1| putative asparagine synthetase (glutamine-HYDROLYZ [Wolinella
           succinogenes DSM 1740]
 gi|34484187|emb|CAE11183.1| PUTATIVE ASPARAGINE SYNTHETASE (GLUTAMINE-HYDROLYZ [Wolinella
           succinogenes]
          Length = 606

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/176 (11%), Positives = 46/176 (26%), Gaps = 13/176 (7%)

Query: 15  FSGGQDSSTCLSWALDR---FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
            SGG DSS   + A  +    +++  +      +   E    + V   +           
Sbjct: 272 LSGGLDSSGVAALASQQYDFGEKLVAIHAKSSLKESDESSYAIEVANHLG---------- 321

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
            + H++  +                +   +               +    +    G   +
Sbjct: 322 LDLHMVEPSFEDFCESLDDLFYTQEEPFGSTSMFMQYFVMKKAKELGCKVMLDGQGADEV 381

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            +G     ++ + D R                   T    L  LKK +   +A D+
Sbjct: 382 FLGYEHYFHNIFKDLRDRKFFLENDFFKDLKTFRYTKEQILEELKKADDAGVAWDV 437


>gi|329942704|ref|ZP_08291483.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chlamydophila psittaci Cal10]
 gi|332287299|ref|YP_004422200.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chlamydophila psittaci 6BC]
 gi|313847883|emb|CBY16878.1| tRNA-methyltransferase [Chlamydophila psittaci RD1]
 gi|325507227|gb|ADZ18865.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chlamydophila psittaci 6BC]
 gi|328814964|gb|EGF84953.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chlamydophila psittaci Cal10]
 gi|328914545|gb|AEB55378.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chlamydophila psittaci 6BC]
          Length = 362

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 46/187 (24%), Gaps = 9/187 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
              + ++  SGG DSS            RV  +     +       C     K   ++  
Sbjct: 1   MNKTVVVAMSGGVDSSVVAYLLKKMTSYRVLGIFMKNWEEEDSNGLCST--AKDYEDVER 58

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +      + +  +   +      ++ +    Q        +  R I F +    +   
Sbjct: 59  VAEQLDIPYYTV--SFAREYRERVFSRFLKEYSQGYTPNPDVLCNREIKFDLLQKKVVEL 116

Query: 126 LGIT----NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            G      +                +               ES   V  PL  + K E  
Sbjct: 117 GGDFLATGHYCRLDVRRQGVELLRGKDPHKDQSYFLCGTRQESLKNVLFPLGDMTKTEVR 176

Query: 182 KLAQDIG 188
            +A   G
Sbjct: 177 AIAAQAG 183


>gi|300717941|ref|YP_003742744.1| GMP synthase [glutamine-hydrolyzing] [Erwinia billingiae Eb661]
 gi|299063777|emb|CAX60897.1| GMP synthase [glutamine-hydrolyzing] [Erwinia billingiae Eb661]
          Length = 526

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 50/185 (27%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS           DR+  +  D G    + L     V     +    
Sbjct: 228 NDKVILGLSGGVDSSVTAMLLHRAIGDRLTCVFVDNG---LLRLNEAEQVMDMFGDHFGL 284

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +  +     A+ G     +  K +     +    +  +                  
Sbjct: 285 NIIHVAAEDRFLDALAGIDEPEAKRKTIGRVFVEVFDEHATMLQDVKWLAQGT------- 337

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                 I     + +     +   I++      L  E  + +  PL  L K E  K+  +
Sbjct: 338 ------IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKLGLVEPLKELFKDEVRKIGLE 391

Query: 187 IGGQD 191
           +G   
Sbjct: 392 LGLPH 396


>gi|302524099|ref|ZP_07276441.1| GMP synthase domain-containing protein [Streptomyces sp. AA4]
 gi|302432994|gb|EFL04810.1| GMP synthase domain-containing protein [Streptomyces sp. AA4]
          Length = 518

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 55/185 (29%), Gaps = 16/185 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+   +       DR+  +  D+G     E                 + 
Sbjct: 220 RAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGERTQVER----------DFV 269

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            + G + +   A    ++  +   +   K +        V  +    L       + +  
Sbjct: 270 AATGVNLVTVDARERFLNALAGVTDPEQKRKIIGREFIRVFEQAERDLKAQGDYRFLVQG 329

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
           T     V      G        I++      L  +    +  PL  L K E  ++  ++G
Sbjct: 330 TLYPDVVESGGGEGT-----ANIKSHHNVGGLPDDLQFELVEPLRLLFKDEVRRVGLELG 384

Query: 189 GQDLV 193
             + +
Sbjct: 385 LPETI 389


>gi|220905538|ref|YP_002480850.1| PP-loop domain-containing protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219869837|gb|ACL50172.1| PP-loop domain protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 303

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 19/62 (30%), Gaps = 2/62 (3%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
            +  +    L+  SGG+DS   +     +   V  L  D G            V ++   
Sbjct: 42  KLFTRDERVLVALSGGKDSLALMLELSRQGYNVTGLHIDLGIPVSSA--AARGVVERFCA 99

Query: 63  LM 64
             
Sbjct: 100 KH 101


>gi|241206724|ref|YP_002977820.1| argininosuccinate synthase [Rhizobium leguminosarum bv. trifolii
          WSM1325]
 gi|240860614|gb|ACS58281.1| argininosuccinate synthase [Rhizobium leguminosarum bv. trifolii
          WSM1325]
          Length = 407

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 6/78 (7%)

Query: 6  KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV--- 61
          K     +L +SGG D+S  L W        V T + D GQ  ++E        + +    
Sbjct: 5  KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEP--ARKKAEMLGIKE 62

Query: 62 ELMPKWKDSLGEDHILPL 79
            +   ++    D + P+
Sbjct: 63 IYIEDVREEFVRDFVFPM 80


>gi|116254242|ref|YP_770080.1| argininosuccinate synthase [Rhizobium leguminosarum bv. viciae
          3841]
 gi|119361254|sp|Q1MAN9|ASSY2_RHIL3 RecName: Full=Argininosuccinate synthase 2; AltName:
          Full=Citrulline--aspartate ligase 2
 gi|115258890|emb|CAK09999.1| putative argininosuccinate synthase [Rhizobium leguminosarum bv.
          viciae 3841]
          Length = 407

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 6/78 (7%)

Query: 6  KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV--- 61
          K     +L +SGG D+S  L W        V T + D GQ  ++E        + +    
Sbjct: 5  KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEP--ARKKAEMLGIKE 62

Query: 62 ELMPKWKDSLGEDHILPL 79
            +   ++    D + P+
Sbjct: 63 IYIEDVREEFVRDFVFPM 80


>gi|120602943|ref|YP_967343.1| argininosuccinate synthase [Desulfovibrio vulgaris DP4]
 gi|166219964|sp|A1VEQ0|ASSY_DESVV RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|120563172|gb|ABM28916.1| argininosuccinate synthase [Desulfovibrio vulgaris DP4]
          Length = 396

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQ 44
          +      +L +SGG D+S  L   A+     V TL+ D GQ
Sbjct: 1  MSGIKKVVLAYSGGLDTSVILKWLAVTYNCEVVTLTADLGQ 41


>gi|291545223|emb|CBL18332.1| argininosuccinate synthase [Ruminococcus sp. 18P13]
          Length = 409

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 51/162 (31%), Gaps = 14/162 (8%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIV 61
           + K+    +L +SGG D+S  + W  + +    V  +S D GQ    EL+      KK  
Sbjct: 1   MAKEIKKVVLAYSGGLDTSIIIPWLKENYNNCEVIAVSGDVGQGT--ELDGLEEKAKKTG 58

Query: 62  E---LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
               ++   K    ED++ P    G +  +             +     +  R     + 
Sbjct: 59  ASKLIVADLKKEFIEDYVYPTVKAGAVYENRYLL-------GTSFARPIIAKRIAEIALA 111

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
               A   G T         + +         I A     ++
Sbjct: 112 EGADAICHGCTGKGNDQVRFELAIKAFAPDMEIIAPWRIWSI 153


>gi|291528701|emb|CBK94287.1| tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine
           synthetase, C-terminal domain [Eubacterium rectale
           M104/1]
          Length = 501

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/208 (11%), Positives = 59/208 (28%), Gaps = 14/208 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR---------FDRVETLSFDYGQRNKVELEC 52
           N +IK   + L+  SGG DS  CL   L+             +E +  ++G R     E 
Sbjct: 12  NKMIKNHSTVLVALSGGADS-VCLLLVLNEIKRQCTDELDFALEAVHVEHGIRGAESRED 70

Query: 53  RLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN 112
                    +L  +         +                   ++ +         P   
Sbjct: 71  ARFA----SDLCERLNIPCHVHSVDVPQYAASHGLGLEEAARILRYEAFEEEAGRYPCET 126

Query: 113 IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
                     + +  +          +   +   R    + +     + +++ VT   PL
Sbjct: 127 AYAADQKQGNSRQAVVAVAHHMEDNAETVLFQMLRGSGAKGLAGMHPVSVKNGVTYIRPL 186

Query: 173 MWLKKYETWKLAQDIGGQDLVNLILEES 200
           +   + +  +  ++ G   + +    ++
Sbjct: 187 LSATRAQIEEYLKENGQAFVTDATNTDT 214


>gi|284052311|ref|ZP_06382521.1| hypothetical protein AplaP_12658 [Arthrospira platensis str.
           Paraca]
          Length = 267

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/205 (11%), Positives = 57/205 (27%), Gaps = 10/205 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  K    +L  SGG+DS+        +  ++E    D  +      E    ++ ++   
Sbjct: 1   MSNKPIRHILGLSGGKDSTALAILLHKQVPQMEYFFCDTHKELPETYEYLDRIKARLGIK 60

Query: 64  MPKWKDSLGEDHILPL------AILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           +       G DH L +      +         +      +   ++   +++  R      
Sbjct: 61  IHYLSAHRGFDHWLDIHGGLLPSPQKRWCTVMMKIKPLEEFVGDDETISYIGIRADENRD 120

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
              +    +                        I   +                  + +K
Sbjct: 121 GYISTKPNIRPVYPFKEKGLVKADILRLLEESGIGLPDYYRWRSRSGCF----FCFFQRK 176

Query: 178 YETWKLAQDIGGQDLVNLILEESHT 202
           YE  KLA++        +  E++H+
Sbjct: 177 YEWVKLAEEHPDLFAQAVDYEQNHS 201


>gi|42779142|ref|NP_976389.1| hypothetical protein BCE_0061 [Bacillus cereus ATCC 10987]
 gi|61216566|sp|Q73FE5|TILS_BACC1 RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|42735057|gb|AAS38997.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
          Length = 476

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 53/197 (26%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSW-----ALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           D++K+  + ++  SGG DS   L +     A  +F+ V     D    +    +      
Sbjct: 17  DVLKERSTIVVGVSGGPDSVALLYYLLEKRAAKQFEIVVA-HVD----HMFRGDESHEDL 71

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           + + +L  +         I           ++       +             R  + L 
Sbjct: 72  QFVQDLCKELGVICETIRINVSQYQQQYGMNAQVAARECRYAFLERIMKKYDAR-YVALG 130

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                     +  +V G     Y+G    R                    +  PL+ + K
Sbjct: 131 HHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNG--------------YLIRPLLGVTK 176

Query: 178 YETWKLAQDIGGQDLVN 194
            E       +     ++
Sbjct: 177 EEIVDYCHKLKIIPRID 193


>gi|332704335|ref|ZP_08424423.1| GMP synthase (glutamine-hydrolyzing) [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332554484|gb|EGJ51528.1| GMP synthase (glutamine-hydrolyzing) [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 513

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 53/187 (28%), Gaps = 22/187 (11%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+            R+  +  D G                   L+   + 
Sbjct: 219 VVCGLSGGIDSTVVAVLLHKAIGKRLHCIFVDNG-------------------LLRINER 259

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
               D +     L      +    ++      +         +    VF A      G+ 
Sbjct: 260 EEVIDFLTESFDLNLKYVEAQELFLSPLEGVTDPERKRKIIGHNFIEVFDAEAHKLQGVK 319

Query: 130 NIVIGVCETDY--SGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            +  G    D   S         I++      L  + ++ +  PL  L K E  K+A ++
Sbjct: 320 WLAQGTLYPDVIESISFKGPSAVIKSHHNVGGLPEKMNLKLVEPLRELFKDEVRKVAYEL 379

Query: 188 GGQDLVN 194
           G  D + 
Sbjct: 380 GLPDNII 386


>gi|301299185|ref|ZP_07205473.1| argininosuccinate synthase [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300853213|gb|EFK80809.1| argininosuccinate synthase [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 403

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 46/171 (26%), Gaps = 13/171 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +    +L +SGG D+S  ++W  ++   V     D G     E +    +++K       
Sbjct: 2   EKEKVVLAYSGGLDTSVEIAWLKNKGYDVIACCIDVG-----EGKDLEAIKEK------- 49

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +G    + +    + +   +   +       N           + +     +A   
Sbjct: 50  -GLKVGAVESIVIDAKHEFAEEYVLPALQGYAYYENKYPLVSALSRPLIVKKLVEVAKEH 108

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
           G T I  G                    E  I   +          +   K
Sbjct: 109 GATAIAHGCTGKGNDQVRFEVGIHALVPEMKIEDPIRDLHWSREEEIEYAK 159


>gi|296131894|ref|YP_003639141.1| argininosuccinate synthase [Thermincola sp. JR]
 gi|296030472|gb|ADG81240.1| argininosuccinate synthase [Thermincola potens JR]
          Length = 403

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/155 (12%), Positives = 45/155 (29%), Gaps = 7/155 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
            +   +L +SGG D+S  + W  +     V  ++ D GQ  ++       ++        
Sbjct: 1   MSKKVVLAYSGGLDTSIIIPWLKENYGYEVIAMAADVGQGEELAPLNEKAIK---TGASK 57

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            + + L E+ +         +  +        +   +     +  R +         A  
Sbjct: 58  IYIEDLKEEFVTDFVW---PTLKAGAVYEGKYLLGTSFARPLIAKRLVEIARQEGAEAVA 114

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
            G T         + +         I A     ++
Sbjct: 115 HGATGKGNDQVRFELTVKALAPDLKIIAPWREWDI 149


>gi|227505290|ref|ZP_03935339.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Corynebacterium striatum ATCC 6940]
 gi|227198123|gb|EEI78171.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Corynebacterium striatum ATCC 6940]
          Length = 511

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 53/185 (28%), Gaps = 12/185 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+   +       DR+  +  D+G     E E          ++   + 
Sbjct: 209 RAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGERE----------QVEKDFV 258

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            S G   +        ++  +       K +           R  +  V     A     
Sbjct: 259 ASTGAKLVTADEREAFLAKLAGVTEPEAKRKAIGAEFIRSFERA-VAGVLNDAPAGSSVD 317

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +    +  PL  L K E   + +++G
Sbjct: 318 FLVQGTLYPDVVESGGGDGTANIKSHHNVGGLPDDVEFELVEPLRLLFKDEVRAVGRELG 377

Query: 189 GQDLV 193
             + +
Sbjct: 378 LPEEI 382


>gi|295130676|ref|YP_003581339.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Propionibacterium acnes SK137]
 gi|291375276|gb|ADD99130.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Propionibacterium acnes SK137]
          Length = 366

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 11/89 (12%), Positives = 23/89 (25%), Gaps = 12/89 (13%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS---------FDYGQR---NKVELECRLCVR 57
            L   SGG DS+   +  ++    V  +             G R   +  +        
Sbjct: 2  KVLAAMSGGVDSAVAAARLVEAGHDVTGVHLALSRNPRSHREGSRGCCSLEDSFDARRAA 61

Query: 58 KKIVELMPKWKDSLGEDHILPLAILGDIS 86
           ++      W  S      +    + +  
Sbjct: 62 DRLGIPFYVWDFSDRFVAEVIDPFIAEYR 90


>gi|223940293|ref|ZP_03632151.1| GMP synthase, large subunit [bacterium Ellin514]
 gi|223891060|gb|EEF57563.1| GMP synthase, large subunit [bacterium Ellin514]
          Length = 513

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 46/184 (25%), Gaps = 17/184 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +       +++  +  + G     E +    V          
Sbjct: 215 NEKVILGLSGGVDSSVAAALLHKAIGNQLTCIFVNNGLLRGREAKTVQEV---------- 264

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G    + L      +            +                    A  A  L
Sbjct: 265 ----FGRHFKIKLQYEDASNLFLKRLKGVTDPERKRKIIGKTFIEVFEAATKRAGKAKFL 320

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   + E+            I++      L  +    +  PL  L K E  +L  +
Sbjct: 321 AQGTLYPDIIESV--PIAGNPAAMIKSHHNVGGLPKKMRFQLVEPLKSLFKDEVRELGLE 378

Query: 187 IGGQ 190
           +G  
Sbjct: 379 LGLP 382


>gi|118467226|ref|YP_883033.1| tRNA-specific 2-thiouridylase MnmA [Mycobacterium avium 104]
 gi|118168513|gb|ABK69410.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycobacterium avium 104]
          Length = 352

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 40/176 (22%), Gaps = 4/176 (2%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL-MPKWKDSLGE 73
            SGG DSS   +  +D    V  +                    K       +  D LG 
Sbjct: 1   MSGGVDSSVAAARMVDAGHDVVGVHLALSTAPGTLRTGSRGCCSKEDASDARRVADVLGI 60

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
              +      +   + +             PN  V     I     +  A  LG   +  
Sbjct: 61  PFYVW--DFAEKFQADVIDEFVSAYARGETPNPCVTCNQKIKFSALSAKAVALGFDAVAT 118

Query: 134 GVCETDYSGY-PDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
           G       G                  L  E       P+    K +  + A   G
Sbjct: 119 GHYARLSGGRLRRAVDKDKDQSYVLAVLSAEQLRHAAFPIGDTPKPQIREEAARRG 174


>gi|110679988|ref|YP_682995.1| GMP synthase [Roseobacter denitrificans OCh 114]
 gi|123172371|sp|Q165N4|GUAA_ROSDO RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|109456104|gb|ABG32309.1| GMP synthase putative [Roseobacter denitrificans OCh 114]
          Length = 522

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 51/184 (27%), Gaps = 17/184 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DSS       +   D++  +  D+G   K E        + +      
Sbjct: 224 SGRVICALSGGVDSSVAAVLIHEAIGDQLTCVYVDHGLMRKDES------AQVVGMFREH 277

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +   L       L +      S       +           +              A  L
Sbjct: 278 YNLPLIHADESDLFLGKLEGVSDPETKRKII--------GGLFIEVFEKYAKEIGGADFL 329

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+    +      TI++      L    ++ +  PL  L K E   L  +
Sbjct: 330 AQGTLYPDVIESV--SFSGGPSVTIKSHHNVGGLPERMNMQLVEPLRELFKDEVRALGHE 387

Query: 187 IGGQ 190
           +G  
Sbjct: 388 LGLP 391


>gi|323488963|ref|ZP_08094200.1| argininosuccinate synthase [Planococcus donghaensis MPA1U2]
 gi|323397355|gb|EGA90164.1| argininosuccinate synthase [Planococcus donghaensis MPA1U2]
          Length = 410

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 15/37 (40%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
               +L +SGG D+S  + W       V  +  D G
Sbjct: 1  MTKKIVLAYSGGLDTSVAIPWLKGEGYDVVAVCLDIG 37


>gi|322514768|ref|ZP_08067792.1| argininosuccinate synthase [Actinobacillus ureae ATCC 25976]
 gi|322119264|gb|EFX91392.1| argininosuccinate synthase [Actinobacillus ureae ATCC 25976]
          Length = 464

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 19/50 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + FSGG D+S  L W   +       + + GQ ++ +         +   
Sbjct: 38 IAFSGGLDTSAALLWMRKKGAVPYAYTANLGQPDEDDYNAIPKKAMEYGA 87


>gi|300813340|ref|ZP_07093691.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300512483|gb|EFK39632.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 504

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 45/187 (24%), Gaps = 21/187 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS   +       + +  +  D+G   K E +      K       +
Sbjct: 210 KGKVLLALSGGVDSSVTAALVSKAIGENLTCIFVDHGLMRKNEGDEVEEAFKNSGMKFIR 269

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   + L      +     + +      ++       V       +      +   
Sbjct: 270 IDAEERFLNRLKTVTDPERKRKIIGEEFIRVFEEEGRKIKSVDFLAQGTIYPDVIESGLG 329

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G                                        +  PL  L K E  KL ++
Sbjct: 330 GAVIKSHHNVGGLPDVVDFK--------------------ELIEPLRMLFKDEVRKLGRE 369

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 370 LGLADYL 376


>gi|257460244|ref|ZP_05625347.1| thiamine biosynthesis protein:ExsB [Campylobacter gracilis
          RM3268]
 gi|257442309|gb|EEV17449.1| thiamine biosynthesis protein:ExsB [Campylobacter gracilis
          RM3268]
          Length = 327

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
           AL LFSGG DS   +   + +   V  L+ D G
Sbjct: 2  KALALFSGGLDSMLAVKLIVSQGIEVLALNMDIG 35


>gi|219681486|ref|YP_002467871.1| cell cycle protein MesJ [Buchnera aphidicola str. 5A
          (Acyrthosiphon pisum)]
 gi|219682042|ref|YP_002468426.1| cell cycle protein MesJ [Buchnera aphidicola str. Tuc7
          (Acyrthosiphon pisum)]
 gi|257471165|ref|ZP_05635164.1| cell cycle protein MesJ [Buchnera aphidicola str. LSR1
          (Acyrthosiphon pisum)]
 gi|219621775|gb|ACL29931.1| cell cycle protein MesJ [Buchnera aphidicola str. Tuc7
          (Acyrthosiphon pisum)]
 gi|219624329|gb|ACL30484.1| cell cycle protein MesJ [Buchnera aphidicola str. 5A
          (Acyrthosiphon pisum)]
 gi|311085853|gb|ADP65935.1| cell cycle protein MesJ [Buchnera aphidicola str. LL01
          (Acyrthosiphon pisum)]
 gi|311086423|gb|ADP66504.1| cell cycle protein MesJ [Buchnera aphidicola str. TLW03
          (Acyrthosiphon pisum)]
          Length = 440

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 24/64 (37%), Gaps = 6/64 (9%)

Query: 7  KAPSALLLFSGGQDSSTCLSWAL----DRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          +  S L+ +SGG DS+  L   L      + ++  +  ++      +        KKI  
Sbjct: 10 QNKSFLVAYSGGLDSTVLLYKLLEIKKKYYIKIRAIHINHNLTLLSKKWSEH--CKKICN 67

Query: 63 LMPK 66
          +   
Sbjct: 68 INHI 71


>gi|205822192|sp|A9M0Y5|MNMA_NEIM0 RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 367

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 43/180 (23%), Gaps = 10/180 (5%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++  SGG DSS   +    +  +V  +     + +  +  C +       +       + 
Sbjct: 11  IVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWEDDDNDEYCSIKQ-----DSFDAIAVAD 65

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
                + +          +      +      PN  V     I        A   G   I
Sbjct: 66  IIGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDVLCNAEIKFKCFLDYAVGQGADTI 125

Query: 132 VIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
             G                              L          PL  L+K E  +LA +
Sbjct: 126 ATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLKPFQLERAIFPLGGLEKPEVRRLAAE 185


>gi|189220437|ref|YP_001941077.1| tRNA(Ile)-lysidine synthase MesJ [Methylacidiphilum infernorum V4]
 gi|189187295|gb|ACD84480.1| tRNA(Ile)-lysidine synthase MesJ [Methylacidiphilum infernorum V4]
          Length = 307

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 40/194 (20%), Positives = 62/194 (31%), Gaps = 27/194 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             + L   SGG DS   L   ++   R   L F +G R   E +       K+VE   K 
Sbjct: 19  PDAVLCGISGGVDSIVLLHSLVETGKRPIVLHFQHGWRQDEESDA------KLVEETAKE 72

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    L +  L   S  +L KN AM                  F +  A  A    
Sbjct: 73  ---------LGVEFLKGKSPRALPKNEAMARMQRYRFFQSAAENKNCFNLVLAHHADDQV 123

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            T ++  +  T   G+   R            +     + V+ PL+   K +  + AQ  
Sbjct: 124 ETFLMQLIRGTGSRGWGMDR------------ITTLGKLVVYRPLLDFWKSDIIRFAQQR 171

Query: 188 GGQDLVNLILEESH 201
             +   +   E +H
Sbjct: 172 NFRWREDETNENTH 185


>gi|169828875|ref|YP_001699033.1| argininosuccinate synthase [Lysinibacillus sphaericus C3-41]
 gi|168993363|gb|ACA40903.1| Argininosuccinate synthase [Lysinibacillus sphaericus C3-41]
          Length = 403

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          ++      +L +SGG D+S  + W  ++   V  +  D G
Sbjct: 5  LVMANKKVVLAYSGGLDTSVAIPWLKEQGWDVIAVCLDVG 44


>gi|110834711|ref|YP_693570.1| GMP synthase [Alcanivorax borkumensis SK2]
 gi|123050395|sp|Q0VNF0|GUAA_ALCBS RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|110647822|emb|CAL17298.1| GMP synthase (glutamine-hydrolysing) [Alcanivorax borkumensis SK2]
          Length = 523

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 54/182 (29%), Gaps = 20/182 (10%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKWK 68
           ++L  SGG DSS   +       D++  +  D G  R++   +        +   + +  
Sbjct: 228 VILGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRHQEGDQVMEMFADNMGVKVIRVD 287

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                        LG ++  +         +                       A  L  
Sbjct: 288 AED--------NFLGKLAGEADP-------EKKRKIIGNTFIDIFDDEASKLQNANWLAQ 332

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I   V E+  S     +   I++      L  +  + +  PL  L K E  K+  ++G
Sbjct: 333 GTIYPDVIESAAS--KTGKAHVIKSHHNVGGLPEDMKLKLVEPLRELFKDEVRKIGLELG 390

Query: 189 GQ 190
             
Sbjct: 391 LP 392


>gi|47204754|emb|CAF92957.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 164

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + +L +SGG D+S  L W  ++   V T   + GQ    + +      + +  
Sbjct: 4  TVVLAYSGGLDTSCILVWLKEQGYDVITFLANVGQD--EDFKAAKEKAETLGA 54


>gi|167038552|ref|YP_001666130.1| PP-loop domain-containing protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320116948|ref|YP_004187107.1| PP-loop domain-containing protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166857386|gb|ABY95794.1| PP-loop domain protein [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|319930039|gb|ADV80724.1| PP-loop domain-containing protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 298

 Score = 44.9 bits (104), Expect = 0.010,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 16/61 (26%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
             ++      ++  SGG+DS             V     D G            V +   
Sbjct: 41  YKMLPPKGRVVVAISGGKDSLVTTFVLKRLGYEVLGFFIDLGIEENNFSSQSREVVESFC 100

Query: 62  E 62
           +
Sbjct: 101 K 101


>gi|325925929|ref|ZP_08187297.1| GMP synthase (glutamine-hydrolyzing) [Xanthomonas perforans 91-118]
 gi|325543652|gb|EGD15067.1| GMP synthase (glutamine-hydrolyzing) [Xanthomonas perforans 91-118]
          Length = 521

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 49/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D G     E +              +   
Sbjct: 226 VILGLSGGVDSSVVAALLHKAIGDKLTCVFVDTGLLRWQEGD--------------QVMA 271

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              +   + +  +                +        +              A  L   
Sbjct: 272 MFAKHMGVKVIRVNAADRYFAKLEGVSDPEAKRKIIGNLFVEIFDEESNKLANAKWLAQG 331

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S     +   I++      L     + +  PL  L K E  +L  ++G 
Sbjct: 332 TIYPDVIESAGS--KTGKAHVIKSHHNVGGLPEHMKLGLVEPLRELFKDEVRRLGVELGL 389

Query: 190 Q 190
            
Sbjct: 390 P 390


>gi|228910456|ref|ZP_04074271.1| Argininosuccinate synthase [Bacillus thuringiensis IBL 200]
 gi|228849222|gb|EEM94061.1| Argininosuccinate synthase [Bacillus thuringiensis IBL 200]
          Length = 411

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   V  L  D G
Sbjct: 12 EKKKVVLAYSGGLDTSVAIKWLQEKNYDVIALCLDLG 48


>gi|228967727|ref|ZP_04128744.1| Argininosuccinate synthase [Bacillus thuringiensis serovar sotto
          str. T04001]
 gi|228791949|gb|EEM39534.1| Argininosuccinate synthase [Bacillus thuringiensis serovar sotto
          str. T04001]
          Length = 411

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   V  L  D G
Sbjct: 12 EKKKVVLAYSGGLDTSVAIKWLQEKNYDVIALCLDLG 48


>gi|229087189|ref|ZP_04219338.1| Argininosuccinate synthase [Bacillus cereus Rock3-44]
 gi|228696161|gb|EEL48997.1| Argininosuccinate synthase [Bacillus cereus Rock3-44]
          Length = 401

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   V  L  D G
Sbjct: 2  EKKKVVLAYSGGLDTSVAIKWLQEKNYDVIALCLDLG 38


>gi|298527840|ref|ZP_07015244.1| argininosuccinate synthase [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298511492|gb|EFI35394.1| argininosuccinate synthase [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 399

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 42/157 (26%), Gaps = 7/157 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +      +L +SGG D+S  L W    +   V   + D GQ      E  L   +K    
Sbjct: 1   MSGIDKVVLAYSGGLDTSVILKWIQKTYDCEVIAFTADLGQ------EEELDGLEKKALS 54

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
               K  + +     +         +        +   ++    +  R     +     A
Sbjct: 55  TGASKAYIEDLQQEFVTDFIQPMFRAAAVYEGRYLLGTSIARPLIAKRMAEIALAEGAQA 114

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         + S         I A     +L
Sbjct: 115 VAHGATGKGNDQVRFELSTMALAPSLRIIAPWREWDL 151


>gi|239816738|ref|YP_002945648.1| argininosuccinate synthase [Variovorax paradoxus S110]
 gi|259585368|sp|C5CUG9|ASSY_VARPS RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|239803315|gb|ACS20382.1| argininosuccinate synthase [Variovorax paradoxus S110]
          Length = 446

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 27/72 (37%), Gaps = 3/72 (4%)

Query: 1  MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M+ I++  P      + FSGG D+S  L W   +       + + GQ ++ + +      
Sbjct: 1  MSTILQNVPAGQKVGIAFSGGLDTSAALHWMKLKGAIPYAYTANLGQPDEPDYDEIPRKA 60

Query: 58 KKIVELMPKWKD 69
                  +  D
Sbjct: 61 MLYGAENARLID 72


>gi|212692103|ref|ZP_03300231.1| hypothetical protein BACDOR_01598 [Bacteroides dorei DSM 17855]
 gi|237709042|ref|ZP_04539523.1| glutaminne-hydrolyzing GMP synthase [Bacteroides sp. 9_1_42FAA]
 gi|237724623|ref|ZP_04555104.1| glutaminne-hydrolyzing GMP synthase [Bacteroides sp. D4]
 gi|265755531|ref|ZP_06090152.1| glutamine-hydrolyzing GMP synthase [Bacteroides sp. 3_1_33FAA]
 gi|212665495|gb|EEB26067.1| hypothetical protein BACDOR_01598 [Bacteroides dorei DSM 17855]
 gi|229436818|gb|EEO46895.1| glutaminne-hydrolyzing GMP synthase [Bacteroides dorei 5_1_36/D4]
 gi|229457104|gb|EEO62825.1| glutaminne-hydrolyzing GMP synthase [Bacteroides sp. 9_1_42FAA]
 gi|263234137|gb|EEZ19730.1| glutamine-hydrolyzing GMP synthase [Bacteroides sp. 3_1_33FAA]
          Length = 517

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 50/188 (26%), Gaps = 21/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS             +  +  D+G   K              E    
Sbjct: 213 NDKVVLGLSGGVDSSVAAVLLNKAIGKNLTCIFVDHGMLRK-------------NEFKNV 259

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D       +          S       +   +       + G+  I +        + 
Sbjct: 260 LHDYECLGLNVIGVDASQKFFS------ELAGVEEPEKKRKIIGKGFIDVFDEEAHKIK- 312

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +  +  G    D           I++      L  + ++ +  PL  L K E   + ++
Sbjct: 313 DVKWLAQGTIYPDCIESLSITGTVIKSHHNVGGLPEKMNLKLCEPLRLLFKDEVRHVGRE 372

Query: 187 IGGQDLVN 194
           +G  + + 
Sbjct: 373 LGMPEHLI 380


>gi|167044130|gb|ABZ08813.1| putative PP-loop family protein [uncultured marine crenarchaeote
          HF4000_APKG5C13]
          Length = 267

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 1/64 (1%)

Query: 8  APSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            S L+  SGG DS+     A          ++ DY    + ELE    +  +I      
Sbjct: 15 KNSILVALSGGVDSALVAYSAYTKLGKSAIAVTADYKTLAQEELEYAKKISSEIGIKHIV 74

Query: 67 WKDS 70
           + +
Sbjct: 75 IEYN 78


>gi|218899784|ref|YP_002448195.1| argininosuccinate synthase [Bacillus cereus G9842]
 gi|226729217|sp|B7IK29|ASSY_BACC2 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|218542345|gb|ACK94739.1| argininosuccinate synthase [Bacillus cereus G9842]
          Length = 401

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   V  L  D G
Sbjct: 2  EKKKVVLAYSGGLDTSVAIKWLQEKNYDVIALCLDLG 38


>gi|167766660|ref|ZP_02438713.1| hypothetical protein CLOSS21_01166 [Clostridium sp. SS2/1]
 gi|317499493|ref|ZP_07957759.1| arginosuccinate synthase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167711783|gb|EDS22362.1| hypothetical protein CLOSS21_01166 [Clostridium sp. SS2/1]
 gi|291558673|emb|CBL37473.1| argininosuccinate synthase [butyrate-producing bacterium SSC/2]
 gi|316893267|gb|EFV15483.1| arginosuccinate synthase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 409

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/213 (12%), Positives = 55/213 (25%), Gaps = 25/213 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
                +L +SGG D +T L   L       V     + GQ N+++         K+    
Sbjct: 1   MKEKVVLAYSGGLD-TTALIPWLKETFDYEVICCCVNCGQGNELDGLDERA---KLSGAS 56

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             + + + +D             + +   V       +                   +A 
Sbjct: 57  KLYIEDIVDD----------FCDNYIMPCVQAGAVYEHQYLLGTSMARPAIAKKLVEIAR 106

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           +     I  G                  A +  I                  + +  +  
Sbjct: 107 KENAVAICHGATGKGNDQIRFELGIKALAPDIKIIAPWRMTD----VWTMQSREDEIEFC 162

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
           +  G    ++L  + SH+ Y   R+  +    G
Sbjct: 163 EAHG----IHLPFDASHS-YSRDRNLWHISHEG 190


>gi|150006078|ref|YP_001300822.1| GMP synthase [Bacteroides vulgatus ATCC 8482]
 gi|254883446|ref|ZP_05256156.1| glutamine-hydrolyzing GMP synthase [Bacteroides sp. 4_3_47FAA]
 gi|294775257|ref|ZP_06740780.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Bacteroides vulgatus PC510]
 gi|319641767|ref|ZP_07996448.1| glutamine-hydrolyzing GMP synthase [Bacteroides sp. 3_1_40A]
 gi|226738388|sp|A6L686|GUAA_BACV8 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|149934502|gb|ABR41200.1| glutaminne-hydrolyzing GMP synthase [Bacteroides vulgatus ATCC
           8482]
 gi|254836239|gb|EET16548.1| glutamine-hydrolyzing GMP synthase [Bacteroides sp. 4_3_47FAA]
 gi|294450834|gb|EFG19311.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Bacteroides vulgatus PC510]
 gi|317386601|gb|EFV67499.1| glutamine-hydrolyzing GMP synthase [Bacteroides sp. 3_1_40A]
          Length = 517

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 50/188 (26%), Gaps = 21/188 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS             +  +  D+G   K              E    
Sbjct: 213 NDKVVLGLSGGVDSSVAAVLLNKAIGKNLTCIFVDHGMLRK-------------NEFKNV 259

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D       +          S       +   +       + G+  I +        + 
Sbjct: 260 LHDYECLGLNVIGVDASQKFFS------ELAGVEEPEKKRKIIGKGFIDVFDEEAHKIK- 312

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +  +  G    D           I++      L  + ++ +  PL  L K E   + ++
Sbjct: 313 DVKWLAQGTIYPDCIESLSITGTVIKSHHNVGGLPEKMNLKLCEPLRLLFKDEVRHVGRE 372

Query: 187 IGGQDLVN 194
           +G  + + 
Sbjct: 373 LGMPEHLI 380


>gi|77166112|ref|YP_344637.1| hypothetical protein Noc_2654 [Nitrosococcus oceani ATCC 19707]
 gi|254435585|ref|ZP_05049092.1| tRNA methyl transferase [Nitrosococcus oceani AFC27]
 gi|76884426|gb|ABA59107.1| conserved hypothetical protein [Nitrosococcus oceani ATCC 19707]
 gi|207088696|gb|EDZ65968.1| tRNA methyl transferase [Nitrosococcus oceani AFC27]
          Length = 347

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 51/180 (28%), Gaps = 10/180 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ---RNKVELECRLCVRKKIV 61
           + +   A+ L SGG DS   +    ++   VE ++F  G     +   +  +   R K  
Sbjct: 1   MGRQYKAIALVSGGLDSMLAVKVIQEQGIHVEGINFFTGFCVEGHTHAIRNKDKNRAKRN 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
             +   +    + H++ +            + V                     +  A  
Sbjct: 61  NALWVAEQLGIKLHMIEVI-------EEYKEVVLNPKYGYGANLNPCLDCKSFMVGKALA 113

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
                    I+ G            +   + A E+  +  +   +      + L + E W
Sbjct: 114 WMKENNFDFIITGEVVGQRPKSQRAKTMPVVARESGAHDLLLRPLCAKNLPITLPEREGW 173


>gi|52425534|ref|YP_088671.1| argininosuccinate synthase [Mannheimia succiniciproducens
          MBEL55E]
 gi|81691357|sp|Q65SH4|ASSY_MANSM RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|52307586|gb|AAU38086.1| ArgG protein [Mannheimia succiniciproducens MBEL55E]
          Length = 444

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 20/57 (35%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +                +  D
Sbjct: 17 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYNAIPKKAMAYGAENARLID 73


>gi|15827913|ref|NP_302176.1| tRNA-specific 2-thiouridylase MnmA [Mycobacterium leprae TN]
 gi|221230390|ref|YP_002503806.1| tRNA-specific 2-thiouridylase MnmA [Mycobacterium leprae Br4923]
 gi|3122976|sp|O33099|MNMA_MYCLE RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|254811455|sp|B8ZS29|MNMA_MYCLB RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|2414533|emb|CAB16422.1| hypothetical protein MLCB637.07 [Mycobacterium leprae]
 gi|13093466|emb|CAC30660.1| probable tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycobacterium leprae]
 gi|219933497|emb|CAR71802.1| probable tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycobacterium leprae Br4923]
          Length = 358

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 33/135 (24%), Gaps = 3/135 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL-MPKWK 68
             L   SGG DSS   +  +D    V  +       +            K       +  
Sbjct: 2   KVLAAMSGGVDSSVAAARMVDAGHDVVGVHLALSTVSGTLRTGSRGCCSKEDVSDARRVA 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D LG    +      +     +  N          PN  V     I     +  A  LG 
Sbjct: 62  DVLGIPFYVW--DFAEKFQEDVIDNFVSAYARGETPNPCVQCNQRIKFSALSVRALMLGF 119

Query: 129 TNIVIGVCETDYSGY 143
             +  G       G 
Sbjct: 120 DTVATGHYARLSGGR 134


>gi|15616731|ref|NP_239943.1| cell cycle protein MesJ [Buchnera aphidicola str. APS
          (Acyrthosiphon pisum)]
 gi|11386907|sp|P57211|TILS_BUCAI RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
          Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
          Full=tRNA(Ile)-lysidine synthetase
 gi|25325269|pir||E84942 cell cycle protein mesJ [imported] - Buchnera sp. (strain APS)
 gi|10038794|dbj|BAB12829.1| cell cycle protein mesJ [Buchnera aphidicola str. APS
          (Acyrthosiphon pisum)]
          Length = 440

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 24/64 (37%), Gaps = 6/64 (9%)

Query: 7  KAPSALLLFSGGQDSSTCLSWAL----DRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          +  S L+ +SGG DS+  L   L      + ++  +  ++      +        KKI  
Sbjct: 10 QNKSFLVAYSGGLDSTVLLYKLLEIKKKYYIKIRAIHINHNLTLLSKKWSEH--CKKICN 67

Query: 63 LMPK 66
          +   
Sbjct: 68 INHI 71


>gi|152977001|ref|YP_001376518.1| argininosuccinate synthase [Bacillus cereus subsp. cytotoxis NVH
          391-98]
 gi|189046380|sp|A7GTR5|ASSY_BACCN RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|152025753|gb|ABS23523.1| Argininosuccinate synthase [Bacillus cytotoxicus NVH 391-98]
          Length = 401

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   V  L  D G
Sbjct: 2  EKKKVVLAYSGGLDTSVAIKWLQEKNYDVIALCLDLG 38


>gi|127512230|ref|YP_001093427.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Shewanella loihica PV-4]
 gi|226739730|sp|A3QCH0|GUAA_SHELP RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|126637525|gb|ABO23168.1| GMP synthase (glutamine-hydrolyzing) [Shewanella loihica PV-4]
          Length = 525

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 53/181 (29%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS            ++  +  D G    + L     V +   +       
Sbjct: 230 VILGLSGGVDSSVVAMLLHRAIGSKLTCVFVDNG---LLRLNEADQVLEMFGDHFGLNIV 286

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +  +     A+ G+    +  K +     D                      A  L   
Sbjct: 287 HVDAESRFLDALAGEAEPEAKRKIIGKVFVDIFDEE-----------SRKCVNAKWLAQG 335

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S         I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 336 TIYPDVIESAGSATGKAHV--IKSHHNVGGLPDDMELGLVEPLRELFKDEVRKIGLELGL 393

Query: 190 Q 190
            
Sbjct: 394 P 394


>gi|75759980|ref|ZP_00740048.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
          israelensis ATCC 35646]
 gi|228903149|ref|ZP_04067283.1| Argininosuccinate synthase [Bacillus thuringiensis IBL 4222]
 gi|74492538|gb|EAO55686.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
          israelensis ATCC 35646]
 gi|228856431|gb|EEN00957.1| Argininosuccinate synthase [Bacillus thuringiensis IBL 4222]
          Length = 411

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   V  L  D G
Sbjct: 12 EKKKVVLAYSGGLDTSVAIKWLQEKNYDVIALCLDLG 48


>gi|152978659|ref|YP_001344288.1| argininosuccinate synthase [Actinobacillus succinogenes 130Z]
 gi|171704258|sp|A6VN06|ASSY_ACTSZ RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|150840382|gb|ABR74353.1| Argininosuccinate synthase [Actinobacillus succinogenes 130Z]
          Length = 444

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 20/57 (35%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +                +  D
Sbjct: 17 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYNAIPKKAMAYGAENARLID 73


>gi|327402734|ref|YP_004343572.1| N-acetyl sugar amidotransferase [Fluviicola taffensis DSM 16823]
 gi|327318242|gb|AEA42734.1| N-acetyl sugar amidotransferase [Fluviicola taffensis DSM 16823]
          Length = 376

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 27/82 (32%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
              K     ++  SGG DSS    +A         +  D G   ++ ++    +  K+  
Sbjct: 64  KNTKSKYDCVIGVSGGLDSSYTAYFAKINGLNPLLVHLDNGWNTELAVQNIQTIATKLEL 123

Query: 63  LMPKWKDSLGEDHILPLAILGD 84
            +        E   + LA L  
Sbjct: 124 DLETVVLDWSEFREIQLAFLRS 145


>gi|319760646|ref|YP_004124584.1| GMP synthase [Candidatus Blochmannia vafer str. BVAF]
 gi|318039360|gb|ADV33910.1| GMP synthase [Candidatus Blochmannia vafer str. BVAF]
          Length = 529

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 58/193 (30%), Gaps = 14/193 (7%)

Query: 8   APSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L FSGG DS            +    +  + G     E+E     +KK   L   
Sbjct: 226 RDRVVLAFSGGIDSCVTALLLKYAIGNNFVCVFVNNGLLCYDEIEKLSSFKKKYQYLNIV 285

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                       + ++       +   V ++I +  + +  V     +      +     
Sbjct: 286 CLSEEKRFLSALVGVVDPEEKRKVVGRVFIEIFETYINSDKVKNIKWLVQGTVCSDVIES 345

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI+ +                 + I++      L    ++ +  P+  L K E  K+   
Sbjct: 346 GISAVYNNS-----------TPNVIKSHHNVGGLPDYLNIKLLEPIKTLFKDEVRKIGLR 394

Query: 187 IGGQDLVNLILEE 199
           +G     +++ + 
Sbjct: 395 LGLPQ--DVVYKH 405


>gi|314923325|gb|EFS87156.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Propionibacterium acnes HL001PA1]
          Length = 396

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 11/89 (12%), Positives = 23/89 (25%), Gaps = 12/89 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLS---------FDYGQR---NKVELECRLCVR 57
             L   SGG DS+   +  ++    V  +             G R   +  +        
Sbjct: 32  KVLAAMSGGVDSAVAAARLVETGHDVTGVHLALSRNPRSHREGSRGCCSLEDSFDARRAA 91

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDIS 86
            ++      W  S      +    + +  
Sbjct: 92  DRLGIPFYVWDFSDRFVVEVIDPFIAEYR 120


>gi|311087006|gb|ADP67086.1| cell cycle protein MesJ [Buchnera aphidicola str. JF99
          (Acyrthosiphon pisum)]
          Length = 440

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 24/64 (37%), Gaps = 6/64 (9%)

Query: 7  KAPSALLLFSGGQDSSTCLSWAL----DRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          +  S L+ +SGG DS+  L   L      + ++  +  ++      +        KKI  
Sbjct: 10 QNKSFLVAYSGGLDSTVLLYKLLEIKKKYYIKIRAIHINHNLTLLSKKWSEH--CKKICN 67

Query: 63 LMPK 66
          +   
Sbjct: 68 INHI 71


>gi|196234632|ref|ZP_03133450.1| GMP synthase, large subunit [Chthoniobacter flavus Ellin428]
 gi|196221301|gb|EDY15853.1| GMP synthase, large subunit [Chthoniobacter flavus Ellin428]
          Length = 521

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 49/184 (26%), Gaps = 13/184 (7%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  + G     E E    V     +       
Sbjct: 221 VILGLSGGVDSSVAAALLHKAIGDQLTCVFVNNGLLRSNEAETVQRV---FGDNFH---- 273

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              +   +  +         +T     +    N                  +    L   
Sbjct: 274 --VKLKYVDASTRFLKKLKGVTDPERKRKIIGNEFVRVFEDATKQLTRGKKSKFKFLAQG 331

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   V E+   G        I++      L       +  PL  L K E  ++   +G 
Sbjct: 332 TLYPDVIESVAIGGNPASL--IKSHHNVGGLPKNMKFKLVEPLRQLFKDEVREVGAQLGL 389

Query: 190 QDLV 193
              +
Sbjct: 390 PKEI 393


>gi|182678257|ref|YP_001832403.1| argininosuccinate synthase [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|182634140|gb|ACB94914.1| Argininosuccinate synthase [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 426

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 52/164 (31%), Gaps = 11/164 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           M+   K     +L +SGG D+S  L W        V T + D GQ  ++       +   
Sbjct: 16  MSTDQKSIKKVVLAYSGGLDTSIILKWLQTTYGCEVVTFTADLGQGEELGPARDKALLLG 75

Query: 60  I---VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
           I      +   ++    D++ P+         + T+   + +   ++    +  + I   
Sbjct: 76  IKPENIFIEDLREEFVRDYVFPM-------FRANTQYEGLYLLGTSIARPLIAKKQIEIA 128

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
                 A   G T         + S Y       + A     +L
Sbjct: 129 RATGADAVAHGATGKGNDQVRFELSYYALEPDIKVIAPWREWDL 172


>gi|170780979|ref|YP_001709311.1| GMP synthase [Clavibacter michiganensis subsp. sepedonicus]
 gi|169155547|emb|CAQ00659.1| GMP synthase [Clavibacter michiganensis subsp. sepedonicus]
          Length = 526

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 50/186 (26%), Gaps = 13/186 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +       D++  +  D+G    +  + R  V +  V       
Sbjct: 223 RVICGLSGGVDSAVAAAIVHRAVGDQLTCVFVDHG---LLRQDERRQVEEDYVAATGV-- 277

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                  ++ +                   +                 +     A    I
Sbjct: 278 ------RLVTVDAADQFLDGLAGVTDPEAKRKIIGREFIRSFEGAAEALVLEAKADGEPI 331

Query: 129 TNIVIGVCETD-YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +V G    D            I++      L  +    +  PL  L K E   + +++
Sbjct: 332 RFLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPEDLKFELVEPLRTLFKDEVRAIGREL 391

Query: 188 GGQDLV 193
           G  + +
Sbjct: 392 GLPEAI 397


>gi|160913582|ref|ZP_02076272.1| hypothetical protein EUBDOL_00058 [Eubacterium dolichum DSM 3991]
 gi|158434043|gb|EDP12332.1| hypothetical protein EUBDOL_00058 [Eubacterium dolichum DSM 3991]
          Length = 513

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 52/184 (28%), Gaps = 17/184 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS   +       D++  +  D+G   K E      V +     M  
Sbjct: 215 NDKVLLGLSGGVDSSVVAALLHKAIGDQLICMFIDHGLLRKGE---AESVMETFGREMNI 271

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +          L  +   S  +     I +  +       + +             
Sbjct: 272 NLVKIDA----KERFLSKLVGVSDPEAKRKIIGNEFVYTFDEEVKKLTS---------GE 318

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  +  G   TD          TI++      L  +    +  PL  L K E   L + 
Sbjct: 319 NIKWLAQGTLYTDVIESGTHTAQTIKSHHNVGGLPEDMQFQLIEPLNTLFKDEVRALGEA 378

Query: 187 IGGQ 190
           +G  
Sbjct: 379 LGLP 382


>gi|159039742|ref|YP_001538995.1| GMP synthase [Salinispora arenicola CNS-205]
 gi|157918577|gb|ABW00005.1| GMP synthase, large subunit [Salinispora arenicola CNS-205]
          Length = 517

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 47/185 (25%), Gaps = 16/185 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DS+   +       D++  +  D+G     E      V K  V     
Sbjct: 217 TKEVICGLSGGVDSAVAAALVHRAVGDQLTCVFVDHGLLRAGE---AEQVEKDYVAAT-- 271

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                    ++  A         LT    +   +                      A+  
Sbjct: 272 ----GIRLKVVDSAD------RFLTALAGVSDPERKRKIIGREFIRTFEAAARDIAAHGD 321

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +              +I++      L  +   ++  PL  L K E   L   
Sbjct: 322 VEFLVQGTLYPDVVESGGGAGTASIKSHHNVGGLPEDLGFSLVEPLRTLFKDEVRALGLQ 381

Query: 187 IGGQD 191
           +G  +
Sbjct: 382 LGLPE 386


>gi|87162110|ref|YP_494273.1| tRNA-specific 2-thiouridylase MnmA [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|87128084|gb|ABD22598.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Staphylococcus aureus subsp. aureus USA300_FPR3757]
 gi|298694901|gb|ADI98123.1| 5-methylaminomethyl-2-thiouridylate- methyltransferase tRNA
           [Staphylococcus aureus subsp. aureus ED133]
          Length = 361

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 45/180 (25%), Gaps = 11/180 (6%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS       ++   V  +             C     +   +++          
Sbjct: 1   MSGGVDSSVTAHVLKEQGYDVIGIFMKNWDDTDENGVC--TATEDYNDVIEVCNQIGIPY 58

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
           + +            +      + +    PN  V     I        A  LG   +  G
Sbjct: 59  YAVN---FEKEYWDKVFTYFLDEYKKGRTPNPDVMCNKEIKFKAFLDHAMNLGADYVATG 115

Query: 135 VCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                +                         L  +    V  P+  ++K E  ++A++ G
Sbjct: 116 HYARIHRHEDGHVEMLRGVDNNKDQTYFLNQLSQQQLSKVMFPIGDIEKSEVRRIAEEQG 175


>gi|89893531|ref|YP_517018.1| argininosuccinate synthase [Desulfitobacterium hafniense Y51]
 gi|119361273|sp|Q24ZG8|ASSY_DESHY RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|89332979|dbj|BAE82574.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 409

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/171 (11%), Positives = 48/171 (28%), Gaps = 7/171 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L +SGG D+S  + W  +     V  ++ D GQ  ++E      ++        
Sbjct: 8   PMKKVVLAYSGGLDTSIIIPWLKENYGYEVIAMAADLGQGEELEPLHEKAIK---SGASK 64

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            + + L E+ +         +  +        +   +     +  R +        +A  
Sbjct: 65  LYIEDLQEEFVTDFIY---PTLKAGAVYEGKYLLGTSFARPLIAQRLVEIAAKEGAVAIA 121

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
            G T         + +         I A     ++        +     + 
Sbjct: 122 HGATGKGNDQVRFELAVKALNPDLEIIAPWRIWDIKSREDAIDYAVERGIP 172


>gi|45358457|ref|NP_988014.1| GMP synthase subunit B [Methanococcus maripaludis S2]
 gi|50400320|sp|Q6LYU3|GUAAB_METMP RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
           AltName: Full=GMP synthetase
 gi|44921215|emb|CAF30450.1| GMP synthase (glutamine-hydrolyzing) [Methanococcus maripaludis S2]
          Length = 310

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 55/188 (29%), Gaps = 26/188 (13%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                ++  SGG DS+           D++  +  D G   K E E    + K+ + L  
Sbjct: 20  NNRKTIIALSGGVDSAVAAVLTDRAVGDKLLAVYVDTGLMRKNESEEIWKIFKEQMGL-- 77

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                + E   + L  L  +      + +                   +F+     +A  
Sbjct: 78  --NLKIVEAKDIFLKELEGVIDPEEKRKIIG----------------RLFIEVFEKVAEE 119

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G   +V G              +        I L     + V  PL  L K E   LA 
Sbjct: 120 QGEEVLVQGTIA-----PDWIESEGQIKTHHNIALPGGMVLDVVEPLRELYKDEVRLLAV 174

Query: 186 DIGGQDLV 193
            +G  D +
Sbjct: 175 ALGLPDQI 182


>gi|329847414|ref|ZP_08262442.1| argininosuccinate synthase [Asticcacaulis biprosthecum C19]
 gi|328842477|gb|EGF92046.1| argininosuccinate synthase [Asticcacaulis biprosthecum C19]
          Length = 411

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 42/157 (26%), Gaps = 5/157 (3%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K     +L +SGG D+S  L W    +   V T + D GQ  ++E        + +    
Sbjct: 7   KPVKKVVLAYSGGLDTSIILKWLQTEYQAEVVTFTADLGQGEELEP--ARRKAELLGIKP 64

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                    +  +   +       + T      +   ++    +    I         A 
Sbjct: 65  ENIFIEDLREEFVRDYVF--PMFRANTVYEGQYLLGTSIARPLIAKAQIDIARKVGADAV 122

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
             G T         +   Y       + A     +  
Sbjct: 123 CHGATGKGNDQVRFELGYYGLEPDIRVIAPWREWDFA 159


>gi|324998256|ref|ZP_08119368.1| sulfate adenylyltransferase subunit 2 [Pseudonocardia sp. P1]
          Length = 304

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 48/192 (25%), Gaps = 15/192 (7%)

Query: 12  LLLFSGGQDSSTCLSWALDRF----DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++LFSGG+DS+  +  A   F         L  D G      +E R  +  ++   +   
Sbjct: 35  VILFSGGKDSTLLVHLAAKAFAPAPVPFPLLHVDTGHNYPEVIEFRDRIAAQLNLRLEVA 94

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +             L D             +Q   L +     R             R  
Sbjct: 95  R---------VEDYLADGRLVERADGTRNPLQTQPLLDAITEHRFDAVFGGGRRDEER-- 143

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                  +   D  G  D R                       P+    + + W+  +  
Sbjct: 144 ARAKERIMSLRDAFGRWDPRKQRPELWNLYNGRHAPGEHVRVFPISNWTELDVWRYIRRE 203

Query: 188 GGQDLVNLILEE 199
           G +        +
Sbjct: 204 GIELPSIYYAHD 215


>gi|306828586|ref|ZP_07461780.1| tRNA(Ile)-lysidine synthetase [Streptococcus mitis ATCC 6249]
 gi|304429194|gb|EFM32280.1| tRNA(Ile)-lysidine synthetase [Streptococcus mitis ATCC 6249]
          Length = 425

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 51/213 (23%), Gaps = 16/213 (7%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKV-ELECRLCVR 57
           +  KK    LL  SGG DS            +    +     ++ QR++    E  L   
Sbjct: 14  EYFKKHSKVLLALSGGLDSMFLFQLLSTYQKELGIELILAHVNHKQRSESDWEENELRKL 73

Query: 58  KKIVELMPKWKDSLGED-----HILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGR 111
               EL        G+                I   +     V     D+ +    +   
Sbjct: 74  ADAAELPIYITSFSGDFSEVRAREFRYDFFRKIMKEAGATALVTAHHADDQVETILMRLI 133

Query: 112 NIIFLVFAATLAYRL---GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV 168
               L     +       GI  I   +        P    +     E +       +  +
Sbjct: 134 RGSRLRHLTGIKESQVVDGIELIRPLLPFHKTDFPPIFHFEDQTNRENSYFRNRIRNRYL 193

Query: 169 HTPLMWLK--KYETWKLAQDIGGQDLVNLILEE 199
                     K     L ++I    +    L +
Sbjct: 194 PELEKENPRLKSALLDLGREISDYQVTITDLSK 226


>gi|225575109|ref|ZP_03783719.1| hypothetical protein RUMHYD_03198 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037668|gb|EEG47914.1| hypothetical protein RUMHYD_03198 [Blautia hydrogenotrophica DSM
           10507]
          Length = 273

 Score = 44.9 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 31/73 (42%), Gaps = 1/73 (1%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K  P AL  FSGG DS+  L  A+    ++         + + EL+  L + +++   + 
Sbjct: 31  KSPPFALA-FSGGVDSAYLLYAAMKNHCQLTAYFIKTPFQPQFELDDALRLAEELSAPLK 89

Query: 66  KWKDSLGEDHILP 78
                + +  ++ 
Sbjct: 90  VLSLDILDREVII 102


>gi|307325477|ref|ZP_07604679.1| argininosuccinate synthase [Streptomyces violaceusniger Tu 4113]
 gi|306888946|gb|EFN19930.1| argininosuccinate synthase [Streptomyces violaceusniger Tu 4113]
          Length = 398

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 1/39 (2%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQ 44
               +L +SGG D S      A +    V  ++ D GQ
Sbjct: 1  MTERVVLAYSGGLDTSVAIGWIAEETGAEVIAVAVDVGQ 39


>gi|297155876|gb|ADI05588.1| argininosuccinate synthase [Streptomyces bingchenggensis BCW-1]
          Length = 399

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 1/39 (2%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQ 44
               +L +SGG D S      A +    V  ++ D GQ
Sbjct: 1  MTERVVLAYSGGLDTSVAIGWIAEETGAEVIAVAVDVGQ 39


>gi|315503275|ref|YP_004082162.1| argininosuccinate synthase [Micromonospora sp. L5]
 gi|315409894|gb|ADU08011.1| argininosuccinate synthase [Micromonospora sp. L5]
          Length = 401

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 19/53 (35%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
               +L +SGG D+S  +   A      V  ++ D GQ  +     R     
Sbjct: 1  MTERVVLAYSGGLDTSVAIPYLAERTGAEVIAVAVDVGQGGEDMAVIRQRALD 53


>gi|302550220|ref|ZP_07302562.1| argininosuccinate synthase [Streptomyces viridochromogenes DSM
          40736]
 gi|302467838|gb|EFL30931.1| argininosuccinate synthase [Streptomyces viridochromogenes DSM
          40736]
          Length = 397

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 1/39 (2%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQ 44
               +L +SGG D S      A +    V  ++ D GQ
Sbjct: 1  MTERVVLAYSGGLDTSVAIGWIAEETGAEVIAVAVDVGQ 39


>gi|239940020|ref|ZP_04691957.1| argininosuccinate synthase [Streptomyces roseosporus NRRL 15998]
 gi|239986503|ref|ZP_04707167.1| argininosuccinate synthase [Streptomyces roseosporus NRRL 11379]
 gi|291443447|ref|ZP_06582837.1| argininosuccinate synthase ArgG [Streptomyces roseosporus NRRL
          15998]
 gi|291346394|gb|EFE73298.1| argininosuccinate synthase ArgG [Streptomyces roseosporus NRRL
          15998]
          Length = 398

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 1/39 (2%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQ 44
               +L +SGG D S      A +    V  ++ D GQ
Sbjct: 1  MTERVVLAYSGGLDTSVAIGWIAEETGAEVIAVAVDVGQ 39


>gi|239932341|ref|ZP_04689294.1| argininosuccinate synthase [Streptomyces ghanaensis ATCC 14672]
          Length = 397

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 1/39 (2%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQ 44
               +L +SGG D S      A +    V  ++ D GQ
Sbjct: 1  MTERVVLAYSGGLDTSVAIGWIAEETGAEVIAVAVDVGQ 39


>gi|255658227|ref|ZP_05403636.1| argininosuccinate synthase [Mitsuokella multacida DSM 20544]
 gi|260849537|gb|EEX69544.1| argininosuccinate synthase [Mitsuokella multacida DSM 20544]
          Length = 403

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQ 44
          + K    +L +SGG D+S  + W  +      V  +  D GQ
Sbjct: 1  MAKIKKVVLAYSGGLDTSVIIPWLKEHYDGCEVIAVCADVGQ 42


>gi|169247746|gb|ACA51686.1| argininosuccinate synthase [Streptomyces exfoliatus]
          Length = 397

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 1/39 (2%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQ 44
               +L +SGG D S      A +    V  ++ D GQ
Sbjct: 1  MTERVVLAYSGGLDTSVAIGWIAEETGAEVIAVAVDVGQ 39


>gi|182439759|ref|YP_001827478.1| argininosuccinate synthase [Streptomyces griseus subsp. griseus
          NBRC 13350]
 gi|326780423|ref|ZP_08239688.1| Argininosuccinate synthase [Streptomyces cf. griseus XylebKG-1]
 gi|229889923|sp|B1W3B3|ASSY_STRGG RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|62896366|emb|CAH94388.1| argininosuccinate synthase ArgG [Streptomyces griseus subsp.
          griseus]
 gi|178468275|dbj|BAG22795.1| putative argininosuccinate synthase [Streptomyces griseus subsp.
          griseus NBRC 13350]
 gi|326660756|gb|EGE45602.1| Argininosuccinate synthase [Streptomyces cf. griseus XylebKG-1]
          Length = 397

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 1/39 (2%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQ 44
               +L +SGG D S      A +    V  ++ D GQ
Sbjct: 1  MTERVVLAYSGGLDTSVAIGWIAEETGAEVIAVAVDVGQ 39


>gi|81428404|ref|YP_395404.1| hypothetical protein LSA0790 [Lactobacillus sakei subsp. sakei
          23K]
 gi|61396667|gb|AAX46037.1| Lsa790 [Lactobacillus sakei]
 gi|78610046|emb|CAI55094.1| Hypothetical protein, ATP utilizing enzyme PP-loop family
          [Lactobacillus sakei subsp. sakei 23K]
          Length = 278

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 32/75 (42%), Gaps = 3/75 (4%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          +++    ++ FSGG DS+  L  AL+    + V  +  +       E    + +  ++  
Sbjct: 15 LQQMKKVIVAFSGGIDSTLVLKMALETLGKENVLAVVANSELFTDEEFNKAIDLAHEMGA 74

Query: 63 LMPKWK-DSLGEDHI 76
           +     + L ++HI
Sbjct: 75 NVEATTLNYLSDEHI 89


>gi|46579508|ref|YP_010316.1| argininosuccinate synthase [Desulfovibrio vulgaris str.
          Hildenborough]
 gi|47605390|sp|P61522|ASSY_DESVH RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|46448922|gb|AAS95575.1| argininosuccinate synthase [Desulfovibrio vulgaris str.
          Hildenborough]
 gi|311233322|gb|ADP86176.1| argininosuccinate synthase [Desulfovibrio vulgaris RCH1]
          Length = 396

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQ 44
          +      +L +SGG D+S  L   A+     V TL+ D GQ
Sbjct: 1  MSGIKKVVLAYSGGLDTSVILKWLAVTYNCEVVTLTADLGQ 41


>gi|254393198|ref|ZP_05008353.1| argininosuccinate synthase [Streptomyces clavuligerus ATCC 27064]
 gi|326440184|ref|ZP_08214918.1| argininosuccinate synthase [Streptomyces clavuligerus ATCC 27064]
 gi|1703452|sp|P50986|ASSY_STRCL RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|886906|emb|CAA88926.1| argininosuccinate synthetase [Streptomyces clavuligerus ATCC
          27064]
 gi|197706840|gb|EDY52652.1| argininosuccinate synthase [Streptomyces clavuligerus ATCC 27064]
 gi|1586511|prf||2204224A argininosuccinate synthetase
          Length = 397

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 1/39 (2%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQ 44
               +L +SGG D S      A +    V  ++ D GQ
Sbjct: 1  MTERVVLAYSGGLDTSVAIGWIAEETGAEVIAVAVDVGQ 39


>gi|330995299|ref|ZP_08319209.1| GMP synthase domain protein [Paraprevotella xylaniphila YIT 11841]
 gi|329575794|gb|EGG57318.1| GMP synthase domain protein [Paraprevotella xylaniphila YIT 11841]
          Length = 525

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 57/187 (30%), Gaps = 21/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D+G   K E             ++  +
Sbjct: 232 DRVILGLSGGVDSSVAAVLLNKAIGKNLTCIFVDHGMLRKNE----------FKNVLHDY 281

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +        +  +         +T     +          + GR+ + +  A        
Sbjct: 282 ECLGLNVIGVDASAKFFKDLEGVTDPEQKRK---------IIGRDFVEVFDAEARKIT-D 331

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +  G    D     +    TI++      L  E ++ +  PL WL K E  ++ + +
Sbjct: 332 AKWLAQGTIYPDRIESLNITGKTIKSHHNVGGLPEEMNLQLCEPLKWLFKDEVRRVGRQM 391

Query: 188 GGQDLVN 194
           G  + + 
Sbjct: 392 GMPEHLI 398


>gi|313246534|emb|CBY35432.1| unnamed protein product [Oikopleura dioica]
          Length = 401

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 28/75 (37%), Gaps = 3/75 (4%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             + +L +SGG D+S  L + + +  RV     D GQ    + E        I      
Sbjct: 1  MPETVVLAYSGGLDTSCILVYLVKQGYRVVACIADVGQD--EDFEKAKTKALSIGA-SAI 57

Query: 67 WKDSLGEDHILPLAI 81
          + + + ++ +     
Sbjct: 58 YVEDVKQEFVTDFIW 72


>gi|205355646|ref|ZP_03222416.1| hypothetical protein Cj8421_1687 [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|205346423|gb|EDZ33056.1| hypothetical protein Cj8421_1687 [Campylobacter jejuni subsp.
           jejuni CG8421]
          Length = 327

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 49/170 (28%), Gaps = 16/170 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL LFSGG DS   +     +   V+ L+ + G  +  +       + K+++       
Sbjct: 2   KALALFSGGLDSMLAMKLITAQGIEVKALNINIGFGSTSD-------KSKVMKKRAAMVG 54

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +  E   +  + L ++  +                       +      A  +      +
Sbjct: 55  ADFEMIDVRNSYLQEVLFN--------PQYGYGKHFNPCIDCHAFMFKTALAMLKEENAS 106

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            I+ G                 +  + A++        +    + L K E
Sbjct: 107 FIITGEVLGQ-RPMSQRSDAMAKVKKLALDEEDLILRPMCAKNLPLTKPE 155


>gi|163731722|ref|ZP_02139169.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Roseobacter litoralis Och 149]
 gi|161395176|gb|EDQ19498.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Roseobacter litoralis Och 149]
          Length = 522

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 51/184 (27%), Gaps = 17/184 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DSS       +   D++  +  D+G   K E        + +      
Sbjct: 224 SGRVICALSGGVDSSVAAVLIHEAIGDQLTCVYVDHGLMRKDES------AQVVGMFREH 277

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +   L       L +      S       +           +              A  L
Sbjct: 278 YNLPLIHADESDLFLGKLNGVSDPETKRKII--------GGLFIEVFEKYAKEIGGADFL 329

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+    +      TI++      L    ++ +  PL  L K E   L  +
Sbjct: 330 AQGTLYPDVIESV--SFSGGPSVTIKSHHNVGGLPERMNMQLVEPLRELFKDEVRALGHE 387

Query: 187 IGGQ 190
           +G  
Sbjct: 388 LGLP 391


>gi|160886327|ref|ZP_02067330.1| hypothetical protein BACOVA_04336 [Bacteroides ovatus ATCC 8483]
 gi|156108212|gb|EDO09957.1| hypothetical protein BACOVA_04336 [Bacteroides ovatus ATCC 8483]
          Length = 426

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 22/68 (32%), Gaps = 1/68 (1%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
          +       L+  SGG DS   L          E    ++  R   E +      +++ E 
Sbjct: 15 LFSPDDKILVALSGGADSVALLYILHTAGYHCEAAHCNFHLR-GKESDRDELFVRQLCER 73

Query: 64 MPKWKDSL 71
          M     ++
Sbjct: 74 MEIHLHTI 81


>gi|28393249|gb|AAO42053.1| putative GMP synthase [Arabidopsis thaliana]
          Length = 534

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 52/187 (27%), Gaps = 9/187 (4%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
           N  +      +   SGG DS+   +       DR+  +  D G     E E  +   ++ 
Sbjct: 221 NKTVASDEHVICALSGGVDSTVAATLVHKAIGDRLHCIFVDNGLLRYKEQERVMDTFER- 279

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                     L    +             +      KI      N F      +      
Sbjct: 280 -------DLHLPVTCVDASERFLSELKGVVDPETKRKIIGGEFINIFDQFAQELEKKHGK 332

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
             A+ +  T     +      G       TI++      L  +  + +  PL  L K E 
Sbjct: 333 KPAFLVQGTLYPDVIESCPPPGTDRTHSHTIKSHHNVGGLPKDMKLKLIEPLKLLFKDEV 392

Query: 181 WKLAQDI 187
            +L + +
Sbjct: 393 RELGRIL 399


>gi|46579870|ref|YP_010678.1| hypothetical protein DVU1459 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46449286|gb|AAS95937.1| conserved domain protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311234129|gb|ADP86983.1| tRNA(Ile)-lysidine synthetase [Desulfovibrio vulgaris RCH1]
          Length = 390

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 31/121 (25%), Gaps = 14/121 (11%)

Query: 7   KAPSALLLFSGGQDSSTCL----SWALDRFDRVETLSFDYGQRNKV--ELECRLCVRKKI 60
           +    ++  SGG DS+  L             +  L  D+G R +   E    +     +
Sbjct: 61  RNCHCVVALSGGADSTALLLILHYLRQRLGLSLSALHVDHGLRPESAAEARAAVTFCHAL 120

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
              +          H L +  L  +      +       D        P  + I      
Sbjct: 121 GIPLAV--------HTLTVDELAAVWRVGTEEAGRKARYDLLAAALPSPAADWICTGHHL 172

Query: 121 T 121
            
Sbjct: 173 G 173


>gi|73666857|ref|YP_302873.1| tRNA(5-methylaminomethyl-2-thiouridylate)- methyl transferase
          [Ehrlichia canis str. Jake]
 gi|123615064|sp|Q3YSN0|MNMA_EHRCJ RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|72393998|gb|AAZ68275.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Ehrlichia canis str. Jake]
          Length = 367

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 7/30 (23%), Positives = 14/30 (46%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS 39
          + ++  SGG DSS   +       +V  ++
Sbjct: 20 TVVVAMSGGVDSSVAAALLHKLGYKVIGIT 49


>gi|44887927|sp|P60502|GUAA_SPIKU RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|34849446|gb|AAP58945.1| GMP synthase [Spiroplasma kunkelii CR2-3x]
          Length = 512

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 52/187 (27%), Gaps = 28/187 (14%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             + +L  SGG DSS C          ++  +  D G                ++     
Sbjct: 215 TDNVVLALSGGVDSSVCAVLLHKAIGKQLTCIFVDTG----------------LLRQNSG 258

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           W D         L I+   +       +        + N     + I  L         +
Sbjct: 259 WNDLQKFQEKFKLNIIKINAQERFLTAL------KGVTNPEEKRKIIGNLFIEIFNEEAI 312

Query: 127 GITNIVIGVCETDY-----SGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
            I N+      T Y     S        TI++      L  +    +  PL  L K E  
Sbjct: 313 KIQNVKWLGQGTIYPDVIESVSVKGPSATIKSHHNVGGLPKDLPFQLIEPLRELFKDEVR 372

Query: 182 KLAQDIG 188
           +  + +G
Sbjct: 373 RTGEALG 379


>gi|332796753|ref|YP_004458253.1| GMP synthase domain-containing protein [Acidianus hospitalis W1]
 gi|332694488|gb|AEE93955.1| GMP synthase domain protein [Acidianus hospitalis W1]
          Length = 371

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 57/189 (30%), Gaps = 24/189 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +    L   SGG DS+T           ++  +  D G   K E        +K+ +++ 
Sbjct: 20  REEKILAAISGGVDSTTAAVLMYKILGKQLLPIMIDTGFLRKDE-------ARKVKDMLK 72

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                   D                ++     ++  +           +F    + +A  
Sbjct: 73  DILPLQIVDK---------------SEEFISALEGISDAEEKRKKFRDLFYSTLSAIAKE 117

Query: 126 LGITNIVIGVCETDY-SGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            GI  +V G    D+       +      ++  I+        V  PL  L K E   LA
Sbjct: 118 HGIRYLVQGTIAADWVETQGGIKTQHNVLVQLGIDTEKTWGFKVIEPLADLYKDEVRALA 177

Query: 185 QDIGGQDLV 193
           + +G    +
Sbjct: 178 RYLGLPKEI 186


>gi|326316608|ref|YP_004234280.1| argininosuccinate synthase [Acidovorax avenae subsp. avenae ATCC
          19860]
 gi|323373444|gb|ADX45713.1| argininosuccinate synthase [Acidovorax avenae subsp. avenae ATCC
          19860]
          Length = 447

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 3/72 (4%)

Query: 1  MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I++  P      + FSGG D+S  L W  ++       + + GQ ++ + +      
Sbjct: 1  MATILQNLPAGQKVGIAFSGGLDTSAALRWMKNKGALPYAYTANLGQPDEPDYDAIPRKA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 MEYGAEKARLID 72


>gi|261839778|gb|ACX99543.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Helicobacter pylori 52]
          Length = 508

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 52/180 (28%), Gaps = 16/180 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DS+   +       D +  +  D+G   K E E    + K +     +  
Sbjct: 211 KVLCAVSGGVDSTVVATLLHRVIKDNLIAVFVDHGLLRKNEKEKVQAMFKDL-----QIP 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  +   + L+ L  +S   L + +            F        L        ++  
Sbjct: 266 LNTIDAKEIFLSKLKGVSEPELKRKII----GETFIEVFEKEAKKHHLKG------KIEF 315

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   S         I+       L       +  PL  L K E   L +++G
Sbjct: 316 LAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEARLLGKELG 375


>gi|269796118|ref|YP_003315573.1| GMP synthase [Sanguibacter keddieii DSM 10542]
 gi|269098303|gb|ACZ22739.1| GMP synthase (glutamine-hydrolyzing) [Sanguibacter keddieii DSM
           10542]
          Length = 526

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 53/187 (28%), Gaps = 15/187 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS   +        ++  +  D+G   + E      V    VE      
Sbjct: 223 RVICGLSGGVDSSVAAALVQKAVGSQLTCVFVDHGLLREGE---AEQVEVDFVEST---- 275

Query: 69  DSLGEDHILP--LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +  ++      L  ++  S  +     I    +       R ++          + 
Sbjct: 276 --GVKLKVVDARERFLSALAGVSDPETKRKIIGREFIRVFEDAAREVVEEAGEVGSEVK- 332

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +               I++      L  +   ++  PL  L K E   +  +
Sbjct: 333 --FLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPDDLQFSLVEPLRTLFKDEVRAVGLE 390

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 391 LGVPEGI 397


>gi|241766368|ref|ZP_04764251.1| Argininosuccinate synthase [Acidovorax delafieldii 2AN]
 gi|241363476|gb|EER58943.1| Argininosuccinate synthase [Acidovorax delafieldii 2AN]
          Length = 447

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 3/72 (4%)

Query: 1  MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I++  P      + FSGG D+S  L W  ++       + + GQ ++ + +      
Sbjct: 1  MATILQNLPVGQKVGIAFSGGLDTSAALRWMKNKGALPYAYTANLGQPDEPDYDAIPRKA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 MEYGAEQARLID 72


>gi|222624284|gb|EEE58416.1| hypothetical protein OsJ_09614 [Oryza sativa Japonica Group]
          Length = 410

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 54/201 (26%), Gaps = 15/201 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS  L        R          +         C     ++      D
Sbjct: 79  RVAVLVSGGVDSSVALRLLHAAGHRCTAFYLKIWFQEDFRNFWSECPWDDDLKYAQAVCD 138

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +     +    L D   + +  ++  + +    PN  V     I           LG  
Sbjct: 139 KIDVPLEVV--HLSDEYWNHVVSHIINEYRSGRTPNPDVLCNTRIKFGAFLEAIENLGFD 196

Query: 130 NIVIGVCETDYSGYPDC----------RHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            I  G         PD           +           +L       +  PL  + K E
Sbjct: 197 YIASGHYAHVVHPSPDDVEGPSVLQLSKDKVKDQTYFLSHLSQTQLRRLLFPLGCITKDE 256

Query: 180 TWKLAQDIGGQDLVNLILEES 200
             +LA  +   DL N   ++S
Sbjct: 257 VRRLAAQM---DLPNQDRKDS 274


>gi|120610536|ref|YP_970214.1| argininosuccinate synthase [Acidovorax citrulli AAC00-1]
 gi|226729220|sp|A1TNA2|ASSY_ACIAC RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|120589000|gb|ABM32440.1| argininosuccinate synthase [Acidovorax citrulli AAC00-1]
          Length = 447

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 3/72 (4%)

Query: 1  MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I++  P      + FSGG D+S  L W  ++       + + GQ ++ + +      
Sbjct: 1  MATILQNLPAGQKVGIAFSGGLDTSAALRWMKNKGALPYAYTANLGQPDEPDYDAIPRKA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 MEYGAEKARLID 72


>gi|333031348|ref|ZP_08459409.1| tRNA(Ile)-lysidine synthase [Bacteroides coprosuis DSM 18011]
 gi|332741945|gb|EGJ72427.1| tRNA(Ile)-lysidine synthase [Bacteroides coprosuis DSM 18011]
          Length = 431

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 24/73 (32%), Gaps = 4/73 (5%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          ++  KA   ++  SGG DS   L    D          ++  R     E        +V+
Sbjct: 14 NLFTKADKIIVGLSGGADSVALLILLKDLGYSCIAAHCNFHLR----GEEADRDEDFVVQ 69

Query: 63 LMPKWKDSLGEDH 75
          L  K    L   H
Sbjct: 70 LCKKLDIKLRSTH 82


>gi|322706302|gb|EFY97883.1| GMP synthase [Metarhizium anisopliae ARSEF 23]
          Length = 528

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 56/188 (29%), Gaps = 6/188 (3%)

Query: 9   PSALLL--FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           P AL++   SGG DS+   +   +   DR   +  + G     E E    V+K + + + 
Sbjct: 216 PKALVIGGVSGGVDSTVGATLMREAIGDRFIAIGINNGCMRLNEFE---EVKKNLRDHLG 272

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                +    +    + G        K +     D          +       +  + + 
Sbjct: 273 INLTVVDAGELFLSRLEGVTDPEKKRKIIGSTFIDVFEKEAIRIEKEAENTPNSGKVEWF 332

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           L  T     +    + G                 +     + +  PL  L K E   + +
Sbjct: 333 LQGTLYPDVIESLSWRGPSATIKTHHNTGGLPERMMNGQGLRLIEPLRLLFKDEVRAIGR 392

Query: 186 DIGGQDLV 193
            +G  + +
Sbjct: 393 QLGIHESL 400


>gi|290968939|ref|ZP_06560474.1| argininosuccinate synthase [Megasphaera genomosp. type_1 str.
          28L]
 gi|290780895|gb|EFD93488.1| argininosuccinate synthase [Megasphaera genomosp. type_1 str.
          28L]
          Length = 409

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQ 44
          +KK    +L +SGG D+S  + W  +      V  +  D GQ
Sbjct: 1  MKKIKKIVLAYSGGLDTSVIIPWLKENYAGAEVIAVCADVGQ 42


>gi|268323620|emb|CBH37208.1| conserved hypothetical protein [uncultured archaeon]
          Length = 323

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 31/123 (25%), Gaps = 18/123 (14%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL L SGG DS       LD+   V  L         +                 K   
Sbjct: 2   KALALLSGGLDSILATKLVLDQGLEVVAL-------QLILPFTAE-----------KTDY 43

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +        + I+   + +   + +                 +   L  A  +A  +G  
Sbjct: 44  AGAVAKRFEIPIIHVEAGAEYLEIIRNPKYGYGSGMNPCIDCHSYMLREAKRIAEEIGAE 103

Query: 130 NIV 132
            I 
Sbjct: 104 FIF 106


>gi|260775090|ref|ZP_05883989.1| asparagine synthetase [glutamine-hydrolyzing] [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260609007|gb|EEX35167.1| asparagine synthetase [glutamine-hydrolyzing] [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 547

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 54/178 (30%), Gaps = 5/178 (2%)

Query: 13  LLFSGGQDSSTCL--SWALDRFDRVETLS-FDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           LL SGG DSS     +  + R   +  L  F  G +N  +L+    V   I  +  +   
Sbjct: 232 LLLSGGLDSSIIASVAQKIRRSKGLNPLHSFAVGLKNSPDLKAAREVANSIGTIHHEV-I 290

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              ED I  +  +     +     +        +          + L    +     G  
Sbjct: 291 YNIEDGINAIKDVIYHLETYDITTIRAATPMYLMARQIKAMGLKMVLSGEGSDELFGGYL 350

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    ++      + + +   +   +    +   V + + +L K E  + A  +
Sbjct: 351 YFHKAPNAKEFHDETVLKLEQLHKYDCLRSNKAMAAWGVESRVPFLDK-EFVECAMTL 407


>gi|256752672|ref|ZP_05493523.1| PP-loop domain protein [Thermoanaerobacter ethanolicus CCSD1]
 gi|256748434|gb|EEU61487.1| PP-loop domain protein [Thermoanaerobacter ethanolicus CCSD1]
          Length = 298

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 16/61 (26%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
             ++      ++  SGG+DS             V     D G            V +   
Sbjct: 41  YKMLPPKGRVVVAISGGKDSLVTTFVLKRLGYEVLGFFIDLGIEENNFSSQSREVVESFC 100

Query: 62  E 62
           +
Sbjct: 101 K 101


>gi|170746885|ref|YP_001753145.1| GMP synthase [Methylobacterium radiotolerans JCM 2831]
 gi|170653407|gb|ACB22462.1| GMP synthase, large subunit [Methylobacterium radiotolerans JCM
           2831]
          Length = 518

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 56/185 (30%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DS+       +   D++  +  D+G     E        +++V L   
Sbjct: 220 SEKVICGLSGGVDSAVAAVLIHEAIGDQLTCVFVDHGLLRLGE-------AEQVVALFR- 271

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + + +PL  +                +        +              A  L
Sbjct: 272 ------DHYNIPLVHVEASGMFLAALEGVSDPEIKRKTIGRLFIDVFEAESKKIGGAKFL 325

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+    +      TI++      L    ++ +  PL  L K E   L ++
Sbjct: 326 AQGTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRVLGKE 383

Query: 187 IGGQD 191
           +G  +
Sbjct: 384 LGLPE 388


>gi|121534679|ref|ZP_01666500.1| Argininosuccinate synthase [Thermosinus carboxydivorans Nor1]
 gi|121306699|gb|EAX47620.1| Argininosuccinate synthase [Thermosinus carboxydivorans Nor1]
          Length = 405

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVR 57
          + +    +L +SGG D+S  + W  +     V  +  D GQ +++       ++
Sbjct: 1  MSEIKKVVLAYSGGLDTSVIIPWLKENFGCEVIAMCADVGQGDELAPIREKALK 54


>gi|295110568|emb|CBL24521.1| argininosuccinate synthase [Ruminococcus obeum A2-162]
          Length = 410

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 54/213 (25%), Gaps = 25/213 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
                +L +SGG D +T L   L       V     + GQ N+++         K+    
Sbjct: 1   MKEKVVLAYSGGLD-TTALIPWLKETFDYEVICCCVNCGQGNELDGLDERA---KLSGAS 56

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             + + + +D             + +   V       +                   +A 
Sbjct: 57  KLYIEDIVDD----------FCDNYVMPCVQAGAVYEHKYLLGTSMARPAIAKKLVEIAR 106

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           +     I  G                  A +  I                  + +     
Sbjct: 107 KENAVAICHGATGKGNDQIRFELGIKALAPDIKIIAPWRMTD----VWTMQSREDEIAFC 162

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
           Q  G    +NL  + SH+ Y   R+  +    G
Sbjct: 163 QAHG----INLPFDASHS-YSRDRNLWHISHEG 190


>gi|294624727|ref|ZP_06703393.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
 gi|292600961|gb|EFF45032.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
          Length = 521

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 54/181 (29%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D G     E +          ++M  + +
Sbjct: 226 VILGLSGGVDSSVVAALLHKAIGDKLTCVFVDTGLLRWQEGD----------QVMAMFAE 275

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G    + +  +                +        +              A  L   
Sbjct: 276 YMG----VKVIRINAADRYFAKLEGVSDPEAKRKIIGNLFVEIFDEESNKLANAKWLAQG 331

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S     +   I++      L     + +  PL  L K E  +L  ++G 
Sbjct: 332 TIYPDVIESAGS--KTGKAHVIKSHHNVGGLPEHMKLGLVEPLRELFKDEVRRLGVELGL 389

Query: 190 Q 190
            
Sbjct: 390 P 390


>gi|291547033|emb|CBL20141.1| argininosuccinate synthase [Ruminococcus sp. SR1/5]
          Length = 410

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 59/213 (27%), Gaps = 25/213 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
                +L +SGG D +T L   L       V     + GQ N+++         K+    
Sbjct: 1   MKEKVVLAYSGGLD-TTALIPWLKETFDYDVVCCCVNCGQGNELDGLEERA---KMSGAS 56

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             + + + ++               +    A  + +++        R +I        A 
Sbjct: 57  KLYIEDIVDEFCDDFI---------MPCVEAGAVYEHSYLLGTSMARPVIAKKLVEI-AR 106

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           + G   I  G                  A +  I                  + +  +  
Sbjct: 107 KEGAVAICHGATGKGNDQIRFELGIKALAPDIKIIAPWRMTD----LWTMQSREDEIEFC 162

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
           +  G    + L  + SH+ Y   R+  +    G
Sbjct: 163 KAHG----ITLPFDASHS-YSRDRNLWHISHEG 190


>gi|262341240|ref|YP_003284095.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Blattabacterium sp. (Blattella germanica) str. Bge]
 gi|262272577|gb|ACY40485.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Blattabacterium sp. (Blattella germanica) str. Bge]
          Length = 511

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 49/178 (27%), Gaps = 16/178 (8%)

Query: 15  FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
           FSGG DS              +  +  D G   K E E    + KK+             
Sbjct: 219 FSGGVDSFVTAYIIHKAIGSSLNCIFVDTGLLLKKERERISLLCKKMN------------ 266

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
              + +    +   S LT  +  +++   +   F+                  G   I  
Sbjct: 267 -LPIQIIDAKNRFLSRLTGVIDPEMKRKIIGEEFISVFQKESEKIQDVEFLAQG--TIYS 323

Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQD 191
            + E+  +                +       + +  PL  L K E  K+ + +G   
Sbjct: 324 DIIESSSNKNQLSDSIKSHHNVGGLPHPTFMKLKLIEPLKELFKDEVRKIGKKLGLPK 381


>gi|289582131|ref|YP_003480597.1| NAD+ synthetase [Natrialba magadii ATCC 43099]
 gi|289531684|gb|ADD06035.1| NAD+ synthetase [Natrialba magadii ATCC 43099]
          Length = 284

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 29/78 (37%), Gaps = 2/78 (2%)

Query: 13  LLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           +  SGG DS+T    A++    D V  ++          +     V +++       +  
Sbjct: 49  IALSGGIDSTTMAYLAVEALGADNVHAITLPKAVNEDTNMSDAERVAEELGIEYDVIEID 108

Query: 71  LGEDHILPLAILGDISHS 88
              D IL LA   + + S
Sbjct: 109 PIMDEILELADAENQNKS 126


>gi|153870888|ref|ZP_02000191.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Beggiatoa sp. PS]
 gi|152072646|gb|EDN69809.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Beggiatoa sp. PS]
          Length = 533

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 56/186 (30%), Gaps = 9/186 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +        ++  +  D G    + L     V     + +   
Sbjct: 228 NKVLLALSGGVDSSVVAALLHRAIGKQLICVFVDNG---LLRLYEAEQVITTFTKHIGLR 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A++G        K +     +     +       + L        +  
Sbjct: 285 VRCVDAEAQFLKALVGITDPEQKRKMIGNLFIEIFEQESEQIHSQELSLSTEKKFLAQGT 344

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I          + +G    +   I++      L  + ++ +  PL  L K E  K+  ++
Sbjct: 345 IY-----PDVIESAGAKTGKAHVIKSHHNVGGLPEKMNLKLLEPLRELFKDEVRKIGIEL 399

Query: 188 GGQDLV 193
           G    +
Sbjct: 400 GLPHEI 405


>gi|254520535|ref|ZP_05132591.1| tRNA(Ile)-lysidine synthetase [Clostridium sp. 7_2_43FAA]
 gi|226914284|gb|EEH99485.1| tRNA(Ile)-lysidine synthetase [Clostridium sp. 7_2_43FAA]
          Length = 469

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/213 (10%), Positives = 57/213 (26%), Gaps = 13/213 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALD----RFDRVETLSFDY---GQRNKVELECRL 54
           N++I++    L+  SGG DS   L             +     ++   GQ    + E   
Sbjct: 17  NNLIQEGDRVLVALSGGPDSVCLLHILYKLRESLNIDIGAAHVNHMLRGQDALNDEEYAK 76

Query: 55  CVRKKIVELM---PKWKDSLGEDHILPLAILGDISHSSLTKNVA-MKIQDNNLPNTFVPG 110
            + K+            D + ++  +   + G          +   +             
Sbjct: 77  EICKEFNIEFYPIRIDIDKIAKEKGISHEMAGREERYKFFDFIKNTQNYSKIAVAHNSND 136

Query: 111 RNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT 170
           +    ++     A   G+  I                 + +       NL      T   
Sbjct: 137 QAETVVMNMMRGAGIEGLCGIRSKRDGGIIRPILCLSREDVENYCKENNLNPRIDKTNLE 196

Query: 171 PLMWLKKY--ETWKLAQDIGGQDLVNLILEESH 201
            +    K   +     ++   +D++  +   ++
Sbjct: 197 NIYSRNKVRLDILPYMKENFNKDIIETLNRMTN 229


>gi|72382697|ref|YP_292052.1| tRNA-specific 2-thiouridylase MnmA [Prochlorococcus marinus str.
           NATL2A]
 gi|123620903|sp|Q46JH9|MNMA_PROMT RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|72002547|gb|AAZ58349.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prochlorococcus marinus str. NATL2A]
          Length = 388

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 32/118 (27%), Gaps = 9/118 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           S ++  SGG DSS   +        VE L+        +      C    +V+       
Sbjct: 22  SVVVGLSGGVDSSLTAALLCKAGWDVEGLTL------WLMKGKGSCCSDGLVDAAGICDQ 75

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              + HI+      +I    +  NV    ++   P         +             
Sbjct: 76  LGIKHHIVDS---KEIFQKEIINNVLKGYEEGITPLPCSRCNKSVKFSEMLKWVKENK 130


>gi|152979347|ref|YP_001344976.1| sulfate adenylyltransferase subunit 2 [Actinobacillus succinogenes
           130Z]
 gi|150841070|gb|ABR75041.1| sulfate adenylyltransferase, small subunit [Actinobacillus
           succinogenes 130Z]
          Length = 308

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 46/182 (25%), Gaps = 18/182 (9%)

Query: 13  LLFSGGQDSSTCLSWALD----RFDRVE----TLSFDYGQRNKVELECRLCVRKKIVELM 64
           LLFSGG+DS   L+ A          +      +  D G      +  R    KK+    
Sbjct: 35  LLFSGGKDSVVLLALARKAFQLEGRDLVLPFPLVHIDTGHNYPEVIRFRDEQVKKLNA-- 92

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L   H+      G +     T +         L        + +          
Sbjct: 93  -----RLVVGHVEDSIAKGTVVLRKETDSRNAAQAVTLLETIEANSFDALMGGARRDEEK 147

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                 I     E         R +        ++ G    V    P+    + + W+  
Sbjct: 148 ARAKERIFSFRDEFGQWDPKAQRPELWSLYNGKMHKGENMRV---FPISNWTELDIWQYI 204

Query: 185 QD 186
           + 
Sbjct: 205 ER 206


>gi|312199971|ref|YP_004020032.1| GMP synthase, large subunit [Frankia sp. EuI1c]
 gi|311231307|gb|ADP84162.1| GMP synthase, large subunit [Frankia sp. EuI1c]
          Length = 571

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 50/185 (27%), Gaps = 16/185 (8%)

Query: 12  LLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           +   SGG DS+   +       D +  +  D+G      L       +   + +      
Sbjct: 271 ICGLSGGVDSAVAGALVQRAVGDALTCVFVDHG------LLRAGEAEQVERDFVASTGVE 324

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG--I 128
           L                +   +   +  ++                      A   G  I
Sbjct: 325 LVHIKAADRFAAALAGVTDPEQKRKIIGRE-------FIRVFEEAARDLEARAEAAGSRI 377

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +V G    D           I++      L  +    +  PL  L K E  +L +++G
Sbjct: 378 EYLVQGTLYPDVIESGSPDAAKIKSHHNVGGLPDDLQFGLVEPLRTLFKDEVRRLGEELG 437

Query: 189 GQDLV 193
             + +
Sbjct: 438 LPEEI 442


>gi|227485722|ref|ZP_03916038.1| PP-loop superfamily ATP-binding protein [Anaerococcus
          lactolyticus ATCC 51172]
 gi|227236277|gb|EEI86292.1| PP-loop superfamily ATP-binding protein [Anaerococcus
          lactolyticus ATCC 51172]
          Length = 277

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 6/80 (7%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWA---LDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M D++K     +L FSGG DS+  L  A       + V  + F      + +L     + 
Sbjct: 12 MRDLLK--EKIVLAFSGGVDSALLLKIASSLRQNENDVVAMFFKAPSSTEEDLVNAKNLA 69

Query: 58 KKI-VELMPKWKDSLGEDHI 76
          +++ V+L  K  D   +DHI
Sbjct: 70 EEMQVKLYIKDVDIFVDDHI 89


>gi|203288114|ref|YP_002223129.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Borrelia recurrentis A1]
 gi|229486333|sp|B5RQ24|MNMA_BORRA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|201085334|gb|ACH94908.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Borrelia recurrentis A1]
          Length = 354

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 66/215 (30%), Gaps = 8/215 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDR-VETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              +L SGG DSS  L   + +  + ++         +++        ++ I  +    K
Sbjct: 2   KIAILLSGGVDSSVALYTMIQKGYKNIKCYYLKIWLEDELSYIGECPWKEDITYVDSVCK 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                  I+ L    +  +  +T  +      N         + I F  F   +  +  +
Sbjct: 62  KFNVPYKIINLQE--EYYNRVVTYAIEELKMGNTPSPDIFCNQRIKFGAFFEKINEKYDL 119

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLAQ 185
                     + +     +    +  + +  L   S   +   H PL  L K E  ++A 
Sbjct: 120 IVTGHYAKIENKNNSYTLKQAKDKIKDQSYFLSHLSKKQISKLHFPLGDLLKSEIRQIAH 179

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNS 220
           +I   +      +    C+LGK        Y    
Sbjct: 180 EIDLPNKNRKDSQGI--CFLGKIKYNEFIKYHLGE 212


>gi|148825315|ref|YP_001290068.1| pyridoxine kinase [Haemophilus influenzae PittEE]
 gi|226695539|sp|A5UA84|TILS_HAEIE RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
          Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
          Full=tRNA(Ile)-lysidine synthetase
 gi|148715475|gb|ABQ97685.1| pyridoxine kinase [Haemophilus influenzae PittEE]
          Length = 430

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 8/84 (9%)

Query: 1  MNDIIKKAPSA-----LLLFSGGQDSSTCL---SWALDRFDRVETLSFDYGQRNKVELEC 52
          ++DI K+   A     L+  SGG DS+  L   +    +   +  LS      +      
Sbjct: 4  LSDIEKQLQKATAQGFLIALSGGLDSTVLLSLFAKLRQKQPHLPPLSVRAIHIHHGLSPN 63

Query: 53 RLCVRKKIVELMPKWKDSLGEDHI 76
               K   +L  +++  L  + +
Sbjct: 64 ADSWAKHCQDLCDQFQIPLIIERV 87


>gi|327440413|dbj|BAK16778.1| argininosuccinate synthase [Solibacillus silvestris StLB046]
          Length = 404

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 17/36 (47%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
              +L +SGG D+S  + W  ++   V  +  D G
Sbjct: 3  NKKVVLAYSGGLDTSVAIPWLKEQGWDVIAVCLDVG 38


>gi|299537867|ref|ZP_07051156.1| argininosuccinate synthase [Lysinibacillus fusiformis ZC1]
 gi|298726846|gb|EFI67432.1| argininosuccinate synthase [Lysinibacillus fusiformis ZC1]
          Length = 397

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 17/36 (47%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
              +L +SGG D+S  + W  ++   V  +  D G
Sbjct: 3  NKKVVLAYSGGLDTSVAIPWLKEQGWDVIAVCLDVG 38


>gi|299134181|ref|ZP_07027374.1| tRNA(Ile)-lysidine synthetase [Afipia sp. 1NLS2]
 gi|298590928|gb|EFI51130.1| tRNA(Ile)-lysidine synthetase [Afipia sp. 1NLS2]
          Length = 347

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 26/79 (32%), Gaps = 8/79 (10%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWA------LDRFDRVETLSFDYGQRNKVELECR--LCVR 57
           K+ P+ +L  SGG DS   L  A      L     +  ++ D+G R     E R    + 
Sbjct: 24  KRIPALVLAVSGGPDSVALLWLAARWRKSLKNGPDLLAVTVDHGLRAAAAHEARNVKRLA 83

Query: 58  KKIVELMPKWKDSLGEDHI 76
             +            +   
Sbjct: 84  SSLGITHRILSWRGPKPKT 102


>gi|296330093|ref|ZP_06872575.1| GMP synthase [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305673338|ref|YP_003865010.1| GMP synthase [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296152682|gb|EFG93549.1| GMP synthase [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305411582|gb|ADM36701.1| GMP synthase [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 513

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 54/187 (28%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E E                
Sbjct: 219 KQVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGEAE---------------- 262

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL- 126
               G           ++           K++  + P          F+      A +L 
Sbjct: 263 ----GVMKTFSEGFNMNVIKVDAKDRFLNKLKGVSDPEQKRKIIGNEFIYVFDDEADKLK 318

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI  +  G   TD          TI++      L  +    +  PL  L K E   L  +
Sbjct: 319 GIDYLAQGTLYTDIIESGTATAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRALGTE 378

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 379 LGIPDEI 385


>gi|291483073|dbj|BAI84148.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Bacillus subtilis subsp. natto BEST195]
          Length = 516

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 54/187 (28%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E E                
Sbjct: 222 KQVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGEAE---------------- 265

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL- 126
               G           ++           K++  + P          F+      A +L 
Sbjct: 266 ----GVMKTFSEGFNMNVIKVDAKDRFLNKLKGVSDPEQKRKIIGNEFIYVFDDEADKLK 321

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI  +  G   TD          TI++      L  +    +  PL  L K E   L  +
Sbjct: 322 GIDYLAQGTLYTDIIESGTATAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRALGTE 381

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 382 LGIPDEI 388


>gi|302878076|ref|YP_003846640.1| GMP synthase, large subunit [Gallionella capsiferriformans ES-2]
 gi|302580865|gb|ADL54876.1| GMP synthase, large subunit [Gallionella capsiferriformans ES-2]
          Length = 539

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 54/182 (29%), Gaps = 20/182 (10%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKWK 68
           ++L  SGG DSS   +        ++  +  D G  R     +      + +   +    
Sbjct: 238 VILGLSGGVDSSVAAALLHRAIGTQLTCVFVDNGLLRLNEAEQVMETFAQNLGVKVIHVD 297

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            S    H L           +   +   K +        V  R    L           +
Sbjct: 298 ASAEFLHHL-----------AGVTDPEQKRKIIGREFVEVFQRESAKLSQ------AKWL 340

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
               I     + +G  + +  TI++      L    H+ +  PL  L K E  +L   +G
Sbjct: 341 AQGTIYPDVIESAGGKNKKAHTIKSHHNVGGLPDTMHLKLLEPLRELFKDEVRELGVQLG 400

Query: 189 GQ 190
             
Sbjct: 401 LP 402


>gi|255767161|ref|NP_388517.2| GMP synthase [Bacillus subtilis subsp. subtilis str. 168]
 gi|239938892|sp|P29727|GUAA_BACSU RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|225184788|emb|CAB12455.2| GMP synthetase [Bacillus subtilis subsp. subtilis str. 168]
          Length = 513

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 54/187 (28%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E E                
Sbjct: 219 KQVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGEAE---------------- 262

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL- 126
               G           ++           K++  + P          F+      A +L 
Sbjct: 263 ----GVMKTFSEGFNMNVIKVDAKDRFLNKLKGVSDPEQKRKIIGNEFIYVFDDEADKLK 318

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI  +  G   TD          TI++      L  +    +  PL  L K E   L  +
Sbjct: 319 GIDYLAQGTLYTDIIESGTATAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRALGTE 378

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 379 LGIPDEI 385


>gi|221321995|ref|ZP_03603289.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Bacillus subtilis subsp. subtilis str. SMY]
          Length = 471

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 54/187 (28%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E E                
Sbjct: 220 KQVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGEAE---------------- 263

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL- 126
               G           ++           K++  + P          F+      A +L 
Sbjct: 264 ----GVMKTFSEGFNMNVIKVDAKDRFLNKLKGVSDPEQKRKIIGNEFIYVFDDEADKLK 319

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI  +  G   TD          TI++      L  +    +  PL  L K E   L  +
Sbjct: 320 GIDYLAQGTLYTDIIESGTATAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRALGTE 379

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 380 LGIPDEI 386


>gi|219723002|ref|YP_002474384.1| GMP synthase [glutamine-hydrolyzing] (Glutamineamidotransferase)
           [Borrelia garinii Far04]
 gi|219694690|gb|ACL35208.1| GMP synthase [glutamine-hydrolyzing] (Glutamineamidotransferase)
           [Borrelia garinii Far04]
          Length = 511

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 57/184 (30%), Gaps = 23/184 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDR-VETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +L  SGG DS  C              +  + G   K E        KKI+EL  +
Sbjct: 215 SKKVILGLSGGTDSLVCALLIKKAIKENFICVFVNTGLLRKNED-------KKILELKHQ 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  +      +      +   + L      + +   +   FV     I L          
Sbjct: 268 YDLN------IKYIDASEKFLNHLKNISDPEEKRKIIGKEFVNVFEKITL-------EDQ 314

Query: 127 GITNIVIGVCETDY--SGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            I  +  G   +D   S   +     I++      L  +  + +  PL    K E  ++ 
Sbjct: 315 NIEYLAQGTIYSDVIESKSKNNASSKIKSHHNVGGLPDKMRLKLLEPLNEFFKDEIIQIG 374

Query: 185 QDIG 188
            ++G
Sbjct: 375 INLG 378


>gi|198426982|ref|XP_002121363.1| PREDICTED: similar to tRNA 5-methylaminomethyl-2-thiouridylate
           methyltransferase 1 [Ciona intestinalis]
          Length = 437

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/186 (11%), Positives = 47/186 (25%), Gaps = 4/186 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +   SGG DS+        R   V  +         +E E   C  ++      +   
Sbjct: 3   KVICAISGGVDSAVAALLLKRRGLNVVGVFMRNW---DLEDEVGQCSVQEDATYATRVCR 59

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +L       + ++ +   +     V      N      +  + + F  F    +   G  
Sbjct: 60  ALDIPF-YEVNLVKEYWTNVFMPMVDQYEMGNTPNPDILCNQLVKFSAFHNKCSSMFGNV 118

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I  G                    E  +   ++        L  + +    +    +GG
Sbjct: 119 VIATGHYARTTLNDRVLTAKVPHTAEQRLLKAVDPFKDQTFFLHKVDRTALLRSYFPLGG 178

Query: 190 QDLVNL 195
                +
Sbjct: 179 IFKSKV 184


>gi|157376255|ref|YP_001474855.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Shewanella sediminis HAW-EB3]
 gi|226739735|sp|A8FY04|GUAA_SHESH RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|157318629|gb|ABV37727.1| GMP synthase, large subunit [Shewanella sediminis HAW-EB3]
          Length = 525

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 50/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS           D++  +  D G     E                +  D
Sbjct: 230 VILGLSGGVDSSVVAMLLHRAIGDKLTCVFVDNGLLRLNE--------------ADQVMD 275

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+   L +  +   +            +        V              A  L   
Sbjct: 276 MFGDHFGLNIVHVNAENRFLDAMKGEADPEAKRKIIGHVFVEIFDEESKKCKNAKWLAQG 335

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S         I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 336 TIYPDVIESAGSATGKAHV--IKSHHNVGGLPDDMELGLVEPLRELFKDEVRKIGLELGL 393

Query: 190 Q 190
            
Sbjct: 394 P 394


>gi|126652180|ref|ZP_01724362.1| argininosuccinate synthase(citrulline--aspartate ligase)
          [Bacillus sp. B14905]
 gi|126591088|gb|EAZ85199.1| argininosuccinate synthase(citrulline--aspartate ligase)
          [Bacillus sp. B14905]
          Length = 397

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 17/36 (47%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
              +L +SGG D+S  + W  ++   V  +  D G
Sbjct: 3  NKKVVLAYSGGLDTSVAIPWLKEQGWDVIAVCLDVG 38


>gi|221312794|ref|ZP_03594599.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Bacillus subtilis subsp. subtilis str. NCIB 3610]
 gi|221317718|ref|ZP_03599012.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Bacillus subtilis subsp. subtilis str. JH642]
 gi|2239288|gb|AAB62311.1| GMP synthetase [Bacillus subtilis]
          Length = 513

 Score = 44.5 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 54/187 (28%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E E                
Sbjct: 220 KQVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGEAE---------------- 263

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL- 126
               G           ++           K++  + P          F+      A +L 
Sbjct: 264 ----GVMKTFSEGFNMNVIKVDAKDRFLNKLKGVSDPEQKRKIIGNEFIYVFDDEADKLK 319

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI  +  G   TD          TI++      L  +    +  PL  L K E   L  +
Sbjct: 320 GIDYLAQGTLYTDIIESGTATAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRALGTE 379

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 380 LGIPDEI 386


>gi|301307418|ref|ZP_07213417.1| hypothetical protein HMPREF9347_05983 [Escherichia coli MS 124-1]
 gi|300837406|gb|EFK65166.1| hypothetical protein HMPREF9347_05983 [Escherichia coli MS 124-1]
 gi|315252382|gb|EFU32350.1| microcin J25-processing protein McjC [Escherichia coli MS 85-1]
          Length = 128

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 17/38 (44%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
           ++++      LLFSGG DS+       +  ++     F
Sbjct: 89  EMMRDNRKIALLFSGGLDSALIFHTLKESGNKFCAYHF 126


>gi|167957606|ref|ZP_02544680.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [candidate division TM7 single-cell isolate TM7c]
          Length = 340

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/177 (9%), Positives = 44/177 (24%), Gaps = 5/177 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +  SGG DSS   +  ++R   V  +      ++   ++C       + +       
Sbjct: 2   KVFVGMSGGVDSSLTAALLIERGHNVTGVYMKNWSQDLPGMKCP--WADDLADAKRVAVQ 59

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              +  +            ++ + +         PN  +     +        A   G  
Sbjct: 60  LGIDLKVYD---FEKEYRENVVEYMISAYSQGYTPNPDIMCNQEVKFKLFLETALADGAD 116

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I  G   T          D  +     +       ++     +     +  +   +
Sbjct: 117 MIATGHYATTRDNRLFMASDANKDQTYFLYRVTSQALSKTFFPLGEYTKQKVRQMSE 173


>gi|167892919|ref|ZP_02480321.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei 7894]
 gi|167917649|ref|ZP_02504740.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei BCC215]
          Length = 510

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 44/175 (25%), Gaps = 7/175 (4%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           ++FSGG DS+  L  A      V  +SF  G     ++E       +   +         
Sbjct: 233 VMFSGGIDSAIVLQLAHRYHPDVTAISF--GLPGSNDIEIAHRYCAEHG-IRHVIYTFTK 289

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           +D +  +             +       +            + L    +     G  ++ 
Sbjct: 290 QDLLENIDDAVYYGEFFEKIDAIDSAIAHFGYYIANKLGLKVALCGEGSD-EIFGGYDLF 348

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
               +          +     ++      M + V    P M     E       +
Sbjct: 349 KTHAQPGALSLYRLNNLHRTDLQRVDRASMRNTVEARVPFMD---AELIDYVLSL 400


>gi|126440112|ref|YP_001057771.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei 668]
 gi|126219605|gb|ABN83111.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei 668]
          Length = 510

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 44/175 (25%), Gaps = 7/175 (4%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           ++FSGG DS+  L  A      V  +SF  G     ++E       +   +         
Sbjct: 233 VMFSGGIDSAIVLQLAHRYHPDVTAISF--GLPGSNDIEIAHRYCAEHG-IRHVIYTFTK 289

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           +D +  +             +       +            + L    +     G  ++ 
Sbjct: 290 QDLLENIDDAVYYGEFFEKIDAIDSAIAHFGYYIANKLGLKVALCGEGSD-EIFGGYDLF 348

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
               +          +     ++      M + V    P M     E       +
Sbjct: 349 KTHAQPGALSLYRLNNLHRTDLQRVDRASMRNTVEARVPFMD---AELIDYVLSL 400


>gi|53718325|ref|YP_107311.1| putative asparagine synthetase B [Burkholderia pseudomallei K96243]
 gi|76811014|ref|YP_332313.1| asparagine synthase [Burkholderia pseudomallei 1710b]
 gi|126453540|ref|YP_001065015.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei 1106a]
 gi|134279525|ref|ZP_01766237.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei 305]
 gi|167718192|ref|ZP_02401428.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei DM98]
 gi|167822831|ref|ZP_02454302.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei 9]
 gi|167844405|ref|ZP_02469913.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei B7210]
 gi|217419807|ref|ZP_03451313.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei 576]
 gi|226196677|ref|ZP_03792257.1| asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei Pakistan 9]
 gi|242317405|ref|ZP_04816421.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei 1106b]
 gi|254187663|ref|ZP_04894175.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254258801|ref|ZP_04949855.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei 1710a]
 gi|52208739|emb|CAH34675.1| putative asparagine synthetase B [glutamine-hydrolyzing]
           [Burkholderia pseudomallei K96243]
 gi|76580467|gb|ABA49942.1| asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei 1710b]
 gi|126227182|gb|ABN90722.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei 1106a]
 gi|134248725|gb|EBA48807.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei 305]
 gi|157935343|gb|EDO91013.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei Pasteur 52237]
 gi|217397111|gb|EEC37127.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei 576]
 gi|225931208|gb|EEH27215.1| asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei Pakistan 9]
 gi|242140644|gb|EES27046.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei 1106b]
 gi|254217490|gb|EET06874.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei 1710a]
          Length = 510

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 44/175 (25%), Gaps = 7/175 (4%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           ++FSGG DS+  L  A      V  +SF  G     ++E       +   +         
Sbjct: 233 VMFSGGIDSAIVLQLAHRYHPDVTAISF--GLPGSNDIEIAHRYCAEHG-IRHVIYTFTK 289

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           +D +  +             +       +            + L    +     G  ++ 
Sbjct: 290 QDLLENIDDAVYYGEFFEKIDAIDSAIAHFGYYIANKLGLKVALCGEGSD-EIFGGYDLF 348

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
               +          +     ++      M + V    P M     E       +
Sbjct: 349 KTHAQPGALSLYRLNNLHRTDLQRVDRASMRNTVEARVPFMD---AELIDYVLSL 400


>gi|65317524|ref|ZP_00390483.1| COG0037: Predicted ATPase of the PP-loop superfamily implicated in
           cell cycle control [Bacillus anthracis str. A2012]
          Length = 480

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 53/197 (26%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSW-----ALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           D++K+  + ++  SGG DS   L +     A  +F+ V     D    +    +      
Sbjct: 21  DVLKERSTIVVGVSGGPDSLALLYYLLEKRAAKQFEIVVA-HVD----HMFRGDESHEDL 75

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           + + +L            I           ++       +             R  + L 
Sbjct: 76  QFVQDLCKGLGVICETIRINVSQYQKQYGMNAQVAARECRYAFLERIMKKYDAR-YVALG 134

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                     +  +V G     Y+G    R                    +  PL+ + K
Sbjct: 135 HHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNG--------------YLIRPLLGVTK 180

Query: 178 YETWKLAQDIGGQDLVN 194
            E      ++     ++
Sbjct: 181 EEIVNYCNELKIIPRID 197


>gi|309790953|ref|ZP_07685494.1| argininosuccinate synthase [Oscillochloris trichoides DG6]
 gi|308226985|gb|EFO80672.1| argininosuccinate synthase [Oscillochloris trichoides DG6]
          Length = 400

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 49/194 (25%), Gaps = 29/194 (14%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM-PK 66
             A+L +SGG D+S  + W  +     V     D GQ  ++E      +     +L+   
Sbjct: 7   KKAVLAYSGGLDTSVIVPWLRENYGCEVICFCADLGQAEELEGLEEKALASGASKLIVRD 66

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            ++    D+ILP    G I                            I       +A   
Sbjct: 67  LREEFMRDYILPTLQAGAIY--------------ERKYLLGTSFARPIIARHQVLIAEEE 112

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   +  G                 +         +   + +  P               
Sbjct: 113 GADAVCHGATGKG----------NDQVRFELTFFALNPRLKIIAPWREWS---IKSRQDA 159

Query: 187 IGGQDLVNLILEES 200
           +      N+ +  +
Sbjct: 160 LDYAAEYNVPVTAT 173


>gi|296536614|ref|ZP_06898691.1| GMP synthase (glutamine-hydrolyzing) [Roseomonas cervicalis ATCC
           49957]
 gi|296263060|gb|EFH09608.1| GMP synthase (glutamine-hydrolyzing) [Roseomonas cervicalis ATCC
           49957]
          Length = 520

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 58/185 (31%), Gaps = 17/185 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS       +   D++  +  D+G      +       + +     ++ 
Sbjct: 224 KVICGLSGGVDSSVAAVLIHEAIGDQLTCIYVDHG------VMRAGETEQVVATFRDRFN 277

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             L       L  LG +   +   +  +K +        V       +  A  LA     
Sbjct: 278 IKLVHRDASDL-FLGQL---AGVTDPELKRKTIGRLFIEVFEEEQEKIGGADFLAQGTLY 333

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
            +++  V  T             ++      L  +  + +  PL  L K E   L +++G
Sbjct: 334 PDVIESVSATGGPSVTI------KSHHNVGGLPEDMRMKLVEPLRDLFKDEVRALGRELG 387

Query: 189 GQDLV 193
             + +
Sbjct: 388 LPEEI 392


>gi|228470778|ref|ZP_04055626.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Porphyromonas uenonis 60-3]
 gi|228307451|gb|EEK16456.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Porphyromonas uenonis 60-3]
          Length = 376

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 50/182 (27%), Gaps = 14/182 (7%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           LL SGG DSS  +   ++   R +      G +++          + I  +    +    
Sbjct: 17  LLASGGVDSSVAMHLLVEAGFRPDLYYIRIGMQDEDGSFLDCPAEEDIELVTLLARRYDL 76

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
              I+ L  +      + T +   +    N             L+       R G +   
Sbjct: 77  HLEIVDLHQVYWDRVVAYTMDAVRRGLTPNPDVMC------NKLIKFGAFEERCGASYDY 130

Query: 133 IGVCETDYSGYPDC--------RHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           I           +                 +    +G      +  P+  L K E  ++A
Sbjct: 131 IATGHYATIRQTEDGLTFLGTSPDPVKDQTDFLAQIGFRQMERLLFPIGHLPKEEVRRIA 190

Query: 185 QD 186
            +
Sbjct: 191 LE 192


>gi|269925434|ref|YP_003322057.1| argininosuccinate synthase [Thermobaculum terrenum ATCC BAA-798]
 gi|269789094|gb|ACZ41235.1| argininosuccinate synthase [Thermobaculum terrenum ATCC BAA-798]
          Length = 417

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 22/151 (14%), Positives = 43/151 (28%), Gaps = 16/151 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K     L +SGG DS+ CL    +++  + +  ++ D GQ            + ++ +  
Sbjct: 16  KYRKVALAYSGGLDSALCLVLLREKYGAEEIIPITVDVGQG-----------QDEVEQSF 64

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            K +    E  ++          +             N           +     A  A 
Sbjct: 65  KKAEVLGVEPLLID---AKSEFTNEWLTKAIRANSSYNGYPVSTSMTRQLIAAKVAQKAV 121

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIE 155
            LG   +  G        Y   +     A +
Sbjct: 122 ELGCDALAEGSSGKGNDQYRMHKVFKYFAPQ 152


>gi|218192183|gb|EEC74610.1| hypothetical protein OsI_10221 [Oryza sativa Indica Group]
          Length = 488

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 54/201 (26%), Gaps = 15/201 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS  L        R          +         C     ++      D
Sbjct: 79  RVAVLVSGGVDSSVALRLLHAAGHRCTAFYLKIWFQEDFRNFWSECPWDDDLKYAQAVCD 138

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +     +    L D   + +  ++  + +    PN  V     I           LG  
Sbjct: 139 KIDVPLEVV--HLSDEYWNHVVSHIINEYRSGRTPNPDVLCNTRIKFGAFLEAIENLGFD 196

Query: 130 NIVIGVCETDYSGYPDC----------RHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            I  G         PD           +           +L       +  PL  + K E
Sbjct: 197 YIASGHYAHVVHPSPDDVEGPSVLQLSKDKVKDQTYFLSHLSQTQLRRLLFPLGCITKDE 256

Query: 180 TWKLAQDIGGQDLVNLILEES 200
             +LA  +   DL N   ++S
Sbjct: 257 VRRLAAQM---DLPNQDRKDS 274


>gi|167901404|ref|ZP_02488609.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei NCTC 13177]
          Length = 510

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 44/175 (25%), Gaps = 7/175 (4%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           ++FSGG DS+  L  A      V  +SF  G     ++E       +   +         
Sbjct: 233 VMFSGGIDSAIVLQLAHRYHPDVTAISF--GLPGSNDIEIAHRYCAEHG-IRHVIYTFTK 289

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           +D +  +             +       +            + L    +     G  ++ 
Sbjct: 290 QDLLENIDDAVYYGEFFEKIDAIDSAIAHFGYYIANKLGLKVALCGEGSD-EIFGGYDLF 348

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
               +          +     ++      M + V    P M     E       +
Sbjct: 349 KTHAQPGALSLYRLNNLHRTDLQRVDRASMRNTVEARVPFMD---AELIDYVLSL 400


>gi|150402411|ref|YP_001329705.1| ExsB family protein [Methanococcus maripaludis C7]
 gi|150033441|gb|ABR65554.1| ExsB family protein [Methanococcus maripaludis C7]
          Length = 258

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 22/62 (35%), Gaps = 1/62 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               ++ +SGG DS+     A     +   ++ D G  ++  ++      KK       
Sbjct: 20 NNKKVIVAYSGGVDSTLVSKIA-SDNTKTLAVTIDNGFFSENIIKKAENRAKKYNIPQKT 78

Query: 67 WK 68
           K
Sbjct: 79 IK 80


>gi|57640885|ref|YP_183363.1| asparagine synthase (glutamine-hydrolyzing) [Thermococcus
           kodakarensis KOD1]
 gi|57159209|dbj|BAD85139.1| asparagine synthase (glutamine-hydrolyzing) [Thermococcus
           kodakarensis KOD1]
          Length = 483

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 23/59 (38%), Gaps = 3/59 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +    +LFSGG DS+     A  ++  V   +   G  +  ++E    V       + +
Sbjct: 242 SKKTGVLFSGGLDSTLVAYLA-SQYSDVILYTA--GTEDSPDIEWARKVADHFGWALRE 297


>gi|320335245|ref|YP_004171956.1| tRNA-specific 2-thiouridylase mnmA [Deinococcus maricopensis DSM
           21211]
 gi|319756534|gb|ADV68291.1| tRNA-specific 2-thiouridylase mnmA [Deinococcus maricopensis DSM
           21211]
          Length = 386

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 51/199 (25%), Gaps = 13/199 (6%)

Query: 1   MNDIIK-KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
           M D+        L   SGG DSS       D+   V      +   NK       C    
Sbjct: 1   MTDMSGGTGKRVLCAMSGGVDSSVSAQLLKDQGYDVIGAMMRFWPDNKRTDTFDSCCSPD 60

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                 +  D +G      L    D    ++             PN  V     +     
Sbjct: 61  AAYEARRVADQVGVP--FYLLDYRDEFKRNIMDPFLEDYARGRTPNPCVNCNTKVKFDAL 118

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV----------TVH 169
              A  LG   +  G                ++          +++            + 
Sbjct: 119 VKKARMLGCEYVATGHYVRREDVPTADGGVEVQFHRGDDPRKDQTYFLWGTPRDALKYIL 178

Query: 170 TPLMWLKKYETWKLAQDIG 188
            P+  ++K    ++A++ G
Sbjct: 179 FPVGQMEKPRVREIAEEHG 197


>gi|304383098|ref|ZP_07365573.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
          [Prevotella marshii DSM 16973]
 gi|304335784|gb|EFM02039.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
          [Prevotella marshii DSM 16973]
          Length = 444

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +++K    L+  SGG DS   L         +E +  ++  R + E +      +K+  
Sbjct: 14 RLLQKEGKYLVALSGGADSVALLFLLNRLHYHLEAVHCNFKLRGE-EADRDEAFCQKLCR 72

Query: 63 LMPK 66
           +  
Sbjct: 73 SLNI 76


>gi|300782713|ref|YP_003763004.1| GMP synthase (glutamine-hydrolysing) [Amycolatopsis mediterranei
           U32]
 gi|299792227|gb|ADJ42602.1| GMP synthase (glutamine-hydrolysing) [Amycolatopsis mediterranei
           U32]
          Length = 518

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 56/185 (30%), Gaps = 16/185 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+   +       DR+  +  D+G     E            ++   + 
Sbjct: 220 RAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGERT----------QVEQDFV 269

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            + G + +   A    +   +   +   K +        V  +    L       + +  
Sbjct: 270 SATGVNLVTIDARQRFLDALAGVTDPEQKRKIIGREFIRVFEQAERDLKAQGDYKFLVQG 329

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
           T     V      G        I++      L  +    +  PL  L K E  ++  ++G
Sbjct: 330 TLYPDVVESGGGEGT-----ANIKSHHNVGGLPDDLQFELVEPLRLLFKDEVRRVGLELG 384

Query: 189 GQDLV 193
             + +
Sbjct: 385 LPETI 389


>gi|226305427|ref|YP_002765385.1| GMP synthetase [Rhodococcus erythropolis PR4]
 gi|226184542|dbj|BAH32646.1| GMP synthetase [Rhodococcus erythropolis PR4]
          Length = 523

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 49/184 (26%), Gaps = 11/184 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A+   SGG DS+   +       DR+  +  D+G     E                    
Sbjct: 221 AICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLMRAGERTQVEQ---------DFVAA 271

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +      +  A       + +T     +            G     L   A+    +   
Sbjct: 272 TGARLITVDAADTFIGELAGVTDPETKRKIIGREFIRSFEGAVSDVLGENASHGATVD-F 330

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +    +  PL  L K E   + +++G 
Sbjct: 331 LVQGTLYPDVVESGGGTGTANIKSHHNVGGLPEDLQFKLVEPLRLLFKDEVRAVGRELGL 390

Query: 190 QDLV 193
            + +
Sbjct: 391 PEEI 394


>gi|289582370|ref|YP_003480836.1| GMP synthase, large subunit [Natrialba magadii ATCC 43099]
 gi|289531923|gb|ADD06274.1| GMP synthase, large subunit [Natrialba magadii ATCC 43099]
          Length = 305

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 11 ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
          A++  SGG DSS   + A +   D++  +  D G   K E +        +  L
Sbjct: 24 AVIALSGGVDSSVAAALAYESIGDQLTPVYVDTGLMRKGETDQIRETFDYMDSL 77


>gi|218200952|gb|EEC83379.1| hypothetical protein OsI_28793 [Oryza sativa Indica Group]
          Length = 1269

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 27/74 (36%), Gaps = 1/74 (1%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           ++      +   SGG DS+   +       DR+  +  D G  +K++      +++KI+ 
Sbjct: 233 MVGPDEHVICALSGGVDSTVAATLVHKAIGDRLHCVFVDNGLLSKLKGVKDPEMKRKIIG 292

Query: 63  LMPKWKDSLGEDHI 76
                        +
Sbjct: 293 REFIAVFDDFAHKL 306


>gi|218133347|ref|ZP_03462151.1| hypothetical protein BACPEC_01212 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992220|gb|EEC58224.1| hypothetical protein BACPEC_01212 [Bacteroides pectinophilus ATCC
           43243]
          Length = 299

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 57/183 (31%), Gaps = 16/183 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIV-EL 63
              ++L+S G+DSS  L  A+  F         L  +   + K  ++ R    KK+  E+
Sbjct: 26  EKPVMLYSIGKDSSVMLHLAMKAFYPEKPPFPFLHVNTTWKFKEMIKFRDEQAKKLGIEM 85

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +    +   +  I P       +    T+ +   +        F  GR            
Sbjct: 86  LEYINEDGVKQGINPFDHGSAYTDIMKTQALKQALNKYGFTAAFGGGRRD--------EE 137

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
                  I     E       + R +  +   + I+ G    V    P+    + + W+ 
Sbjct: 138 KSRAKERIFSFRNENHAWDPKNQRPEMWKLYNSKIHKGESIRV---FPISNWTETDIWQY 194

Query: 184 AQD 186
            + 
Sbjct: 195 IKR 197


>gi|254173555|ref|ZP_04880227.1| N-type ATP pyrophosphatase superfamily protein [Thermococcus sp.
          AM4]
 gi|214032247|gb|EEB73077.1| N-type ATP pyrophosphatase superfamily protein [Thermococcus sp.
          AM4]
          Length = 263

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 24/55 (43%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
          +    L+LFSGG+DSS  L    +    V  L+F +    +  L   +   K + 
Sbjct: 21 RDRKILMLFSGGKDSSLALYLLKEAKLNVSALTFFHRWSWRETLNWAMKFTKNLG 75


>gi|145640364|ref|ZP_01795948.1| DNA mismatch repair protein [Haemophilus influenzae R3021]
 gi|145274950|gb|EDK14812.1| DNA mismatch repair protein [Haemophilus influenzae 22.4-21]
          Length = 430

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 29/84 (34%), Gaps = 8/84 (9%)

Query: 1  MNDIIKKAPSA-----LLLFSGGQDSSTCL---SWALDRFDRVETLSFDYGQRNKVELEC 52
          ++DI K+         L+  SGG DS+  L   +    +   +  LS      +      
Sbjct: 4  LSDIEKQLKKTTAQAFLIALSGGLDSTVLLSLFAKLRQKQPHLPPLSIRAIHIHHGLSPN 63

Query: 53 RLCVRKKIVELMPKWKDSLGEDHI 76
               K   +L  + +  L  + +
Sbjct: 64 ADSWAKHCQDLCDQLQIPLIIERV 87


>gi|311087577|gb|ADP67656.1| cell cycle protein MesJ [Buchnera aphidicola str. JF98
          (Acyrthosiphon pisum)]
          Length = 398

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 24/64 (37%), Gaps = 6/64 (9%)

Query: 7  KAPSALLLFSGGQDSSTCLSWAL----DRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          +  S L+ +SGG DS+  L   L      + ++  +  ++      +        KKI  
Sbjct: 10 QNKSFLVAYSGGLDSTVLLYKLLEIKKKYYIKIRAIHINHNLTLLSKKWSEH--CKKICN 67

Query: 63 LMPK 66
          +   
Sbjct: 68 INHI 71


>gi|297564753|ref|YP_003683725.1| NAD+ synthetase [Meiothermus silvanus DSM 9946]
 gi|296849202|gb|ADH62217.1| NAD+ synthetase [Meiothermus silvanus DSM 9946]
          Length = 289

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 17/62 (27%), Gaps = 2/62 (3%)

Query: 9  PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            A++  SGG DS+  L+  +       V  +   +        E    +          
Sbjct: 38 KKAVVALSGGVDSAVTLALGVQALGAKNVYAVYMPHAISRPESREHAELIAGMYGVPFEV 97

Query: 67 WK 68
            
Sbjct: 98 VD 99


>gi|300362442|ref|ZP_07058618.1| GMP synthase (glutamine-hydrolyzing) [Lactobacillus gasseri JV-V03]
 gi|300353433|gb|EFJ69305.1| GMP synthase (glutamine-hydrolyzing) [Lactobacillus gasseri JV-V03]
          Length = 517

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 57/186 (30%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS   +       D++  +  D+G   K E +    V + + + +   
Sbjct: 223 KKVILGLSGGVDSSVTATLLHKAIGDQLTAIFVDHGMLRKDEGD---QVMQALNKDLGVN 279

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       L  L  ++     + +  K             +++ FL         + 
Sbjct: 280 IIRVNAQKRF-LGKLKGVTDPEQKRKIIGKEFIEVFNEEAKKLKDVDFLAQGTLYTDVIE 338

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                                 TI++      L  + H  +  PL  L K E  +L + +
Sbjct: 339 ---------------SGTNTAQTIKSHHNVGGLPEDMHFELIEPLRKLFKDEVRELGEKL 383

Query: 188 GGQDLV 193
           G    +
Sbjct: 384 GIPHDL 389


>gi|171914097|ref|ZP_02929567.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Verrucomicrobium spinosum DSM 4136]
          Length = 506

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 46/182 (25%), Gaps = 19/182 (10%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            +   SGG DS+           +   L  D+G   K E E      K++   +      
Sbjct: 215 VICGVSGGVDSTVLAVLLHKAGVKQRCLFVDHGLLRKNESEEVQAQFKEVGVPIEVVDAR 274

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                      LG +   +  +               + G   + + F A     L    
Sbjct: 275 --------ETFLGALKGVTDPEAKRK-----------IIGNLFLDVFFGAADHIELMAQG 315

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
            +        +                  L ++    V  PL  L K E   L + +G  
Sbjct: 316 TLYPDVIESATSGSIASKIKTHHNRVDRVLELKDQGRVIEPLAELFKDEVRALGEALGIP 375

Query: 191 DL 192
             
Sbjct: 376 HR 377


>gi|114776817|ref|ZP_01451860.1| PP-loop [Mariprofundus ferrooxydans PV-1]
 gi|114552903|gb|EAU55334.1| PP-loop [Mariprofundus ferrooxydans PV-1]
          Length = 324

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 19/45 (42%)

Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
          +SGG DS+  L     +  RV+    D+G R     E  L   K 
Sbjct: 25 WSGGADSTALLLMLQQQGYRVQAWHVDHGWRESSIKETELLAEKA 69


>gi|145596344|ref|YP_001160641.1| GMP synthase [Salinispora tropica CNB-440]
 gi|145305681|gb|ABP56263.1| GMP synthase (glutamine-hydrolyzing) [Salinispora tropica CNB-440]
          Length = 517

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 48/185 (25%), Gaps = 16/185 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DS+   +       D++  +  D+G     E      V K  V     
Sbjct: 217 TKEVICGLSGGVDSAVAAALVHRAVGDQLTCVFVDHGLLRAGE---AEQVEKDYVAAT-- 271

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 +  ++  A         LT    +   +                      A+  
Sbjct: 272 ----GIKLRVVDAAD------QFLTALAGVTDPERKRKIIGREFIRTFEAAARDIAAHGD 321

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +              +I++      L  +   ++  PL  L K E   L   
Sbjct: 322 VEFLVQGTLYPDVVESGGGAGTASIKSHHNVGGLPEDLGFSLVEPLRTLFKDEVRALGLQ 381

Query: 187 IGGQD 191
           +G  +
Sbjct: 382 LGLPE 386


>gi|78188567|ref|YP_378905.1| GMP synthase [Chlorobium chlorochromatii CaD3]
 gi|91206800|sp|Q3AT13|GUAA_CHLCH RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|78170766|gb|ABB27862.1| GMP synthase (glutamine-hydrolyzing) [Chlorobium chlorochromatii
           CaD3]
          Length = 511

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 53/185 (28%), Gaps = 22/185 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             + +   SGG DS+            ++  +  D G   K E        +K++  +  
Sbjct: 218 NNTVICGISGGVDSTVAAVLVSKAIGKQLHCVFVDNGLLRKNE-------AEKVMHFLKP 270

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +       L  L  +   +  +               + GR  I +        + 
Sbjct: 271 LGLHITLADSSDL-FLKRLKGVASPEKKRK-----------IIGRTFIQVFEEQIHHEKF 318

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                     +   S       +TI++      L     + +  PL  L K E   + ++
Sbjct: 319 --LVQGTLYPDVIESISVKGPSETIKSHHNVGGLPKRMKLKLIEPLRELFKDEVRAVGRE 376

Query: 187 IGGQD 191
           +G  +
Sbjct: 377 LGIPE 381


>gi|295089879|emb|CBK75986.1| tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine
           synthetase, C-terminal domain [Clostridium cf.
           saccharolyticum K10]
          Length = 464

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 52/197 (26%), Gaps = 16/197 (8%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR----FDRVETLSFDYGQRNKVELECRLCVR 57
           N ++K     ++  SGG DS   LS   D       R+  +   +G R +          
Sbjct: 12  NGMLKAGQRVVVGLSGGADSVCLLSLLSDMRSSLSIRLRAVHVHHGLRGQE--------A 63

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
            +  +   +    L    IL +      + +                      R      
Sbjct: 64  DRDADFSRELCRKLDIPFILKMENAHQEAQNRRISEEEAGRLLRYEAFEQEAARWEDKER 123

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                A  + I          D S      H    +    +         V  PL+ + +
Sbjct: 124 EQEGAALPVRIAV----AHHGDDSAETILYHLFRGSGLRGLAGIAPVRGRVIRPLLCVSR 179

Query: 178 YETWKLAQDIGGQDLVN 194
            E  +  ++ G   + +
Sbjct: 180 QEILEYLREEGLSYVTD 196


>gi|115525265|ref|YP_782176.1| GMP synthase [Rhodopseudomonas palustris BisA53]
 gi|115519212|gb|ABJ07196.1| GMP synthase (glutamine-hydrolyzing) [Rhodopseudomonas palustris
           BisA53]
          Length = 561

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 56/183 (30%), Gaps = 17/183 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+       +   D++  +  D+G   K E        + +V+L     
Sbjct: 265 KVICGLSGGVDSAVAAVLIHEAIGDQLTCVFVDHGLLRKDE-------ARSVVDLFRH-- 315

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 + +PL  +          +     +        +              A  L  
Sbjct: 316 -----HYNIPLVHVDAAKLFLGQLDGVTDPEQKRKIIGKLFIDVFEGEAKMIGGADFLAQ 370

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+    +      TI++      L    ++ +  PL  L K E   L +++G
Sbjct: 371 GTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPARMNMKLVEPLRELFKDEVRVLGKELG 428

Query: 189 GQD 191
             D
Sbjct: 429 LPD 431


>gi|322392415|ref|ZP_08065875.1| tRNA(Ile)-lysidine synthetase [Streptococcus peroris ATCC 700780]
 gi|321144407|gb|EFX39808.1| tRNA(Ile)-lysidine synthetase [Streptococcus peroris ATCC 700780]
          Length = 425

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 22/196 (11%), Positives = 52/196 (26%), Gaps = 14/196 (7%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKV--ELECRLCVRKK 59
           K     +L  SGG DS            +    +     ++ QR +   E      + ++
Sbjct: 17  KHHSRVVLALSGGLDSMFLFHLLSTYQKELGIELFLAHVNHKQRPESDNEEYELRKLAEQ 76

Query: 60  IVELMPKWKDSLGEDHILPLAIL------GDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
           +  +        G+                 +  +  T  V     D+     F+     
Sbjct: 77  VG-VPIYVAHFTGDFSEANARQFRYEFLKKVMRQTVATALVTAHHADDQAETIFMRLIRG 135

Query: 114 IFLVFAATLAYRLGITN-IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
           + L   + +  R       +I    + Y            A     +        ++ P 
Sbjct: 136 VRLQHLSAIKERQEFDKGELIRPLLSFYKKDFPEIEHFEDATNKENSYFRNRVRNIYLPQ 195

Query: 173 MWLKKYETWKLAQDIG 188
           +  +  +  +   ++G
Sbjct: 196 LEKENIQVKRAFLELG 211


>gi|296119696|ref|ZP_06838254.1| argininosuccinate synthase [Corynebacterium ammoniagenes DSM
          20306]
 gi|295967579|gb|EFG80846.1| argininosuccinate synthase [Corynebacterium ammoniagenes DSM
          20306]
          Length = 407

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 19/53 (35%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
               +L +SGG D+S  +   A      V  +S D GQ  +     R     
Sbjct: 1  MNARVVLAYSGGLDTSVAIPYLAKMTGGDVVAVSLDLGQGGEDMESVRQRALD 53


>gi|218130045|ref|ZP_03458849.1| hypothetical protein BACEGG_01630 [Bacteroides eggerthii DSM 20697]
 gi|217987765|gb|EEC54092.1| hypothetical protein BACEGG_01630 [Bacteroides eggerthii DSM 20697]
          Length = 426

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/192 (10%), Positives = 51/192 (26%), Gaps = 23/192 (11%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
            +       ++  SGG DS   L          E    ++  R K        V +    
Sbjct: 14  RLFMPTDKVIIALSGGADSVALLCLLQTLGYNCEAAHCNFHLRGKESDRDEAFVCQ---- 69

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                       HI+          ++  +++++++    L   +              +
Sbjct: 70  ---LCAKRQVPLHIVHFN----TVRTAEERHISIEMAARELRYEWFEEIRRKSGANVIAV 122

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A+    +   + +     +G    R    +            +  +  PL+ L + E   
Sbjct: 123 AHHRDDSVETLLLNLIRGTGINGLRGIRPK------------NGHIVRPLLCLDRKEIIN 170

Query: 183 LAQDIGGQDLVN 194
                G   + +
Sbjct: 171 YLNRTGQDYVTD 182


>gi|212721228|ref|NP_001131207.1| hypothetical protein LOC100192515 [Zea mays]
 gi|194690872|gb|ACF79520.1| unknown [Zea mays]
          Length = 486

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 49/192 (25%), Gaps = 12/192 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS  L        R          +         C   + ++      D
Sbjct: 76  RVAVLVSGGVDSSVALRLLHAAGHRCTAFYLKIWFQEDFRNFWSECPWDEDLKYAQAVCD 135

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +     +    L D   + +  ++  + +    PN  V     I           LG  
Sbjct: 136 KIDVPLEVV--HLSDEYWNHVVSHMINEYRCGRTPNPDVLCNTRIKFGSFLEAIENLGFD 193

Query: 130 NIVIGVCETDYSGYPDCR----------HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            I  G          +                       +L       +  PL  + K E
Sbjct: 194 YIASGHYAHVVHPSAENTEAPSVLQLSKDKIKDQTYFLSHLSQSQLRRLLFPLGCITKDE 253

Query: 180 TWKLAQDIGGQD 191
             +LA  +G  +
Sbjct: 254 VRRLATQMGLPN 265


>gi|154500399|ref|ZP_02038437.1| hypothetical protein BACCAP_04066 [Bacteroides capillosus ATCC
           29799]
 gi|150270904|gb|EDM98187.1| hypothetical protein BACCAP_04066 [Bacteroides capillosus ATCC
           29799]
          Length = 430

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 50/159 (31%), Gaps = 11/159 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +      +L +SGG D+S  + W  + ++   +  +S D GQ  +++      ++    +
Sbjct: 26  MADIKKVVLAYSGGLDTSIIIPWLKENYNNPEIIAVSGDVGQGTELDGLEEKAIKTGASK 85

Query: 63  LM-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           L      D + +D I+P   +G              +         +  R +        
Sbjct: 86  LYVEDLTDEMVDDVIIPSMQMGAKY--------EDYLLGTAFARPIIAKRLVEIAKKEGA 137

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
            A   G T         + +         I A     ++
Sbjct: 138 DAICHGCTGKGNDQVRFELAIKRFAPEMKIIAPWREWDI 176


>gi|30260254|ref|NP_842631.1| hypothetical protein BA_0062 [Bacillus anthracis str. Ames]
 gi|47525316|ref|YP_016665.1| hypothetical protein GBAA_0062 [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49183097|ref|YP_026349.1| hypothetical protein BAS0062 [Bacillus anthracis str. Sterne]
 gi|165872559|ref|ZP_02217191.1| tRNA(Ile)-lysidine synthetase [Bacillus anthracis str. A0488]
 gi|167635086|ref|ZP_02393403.1| tRNA(Ile)-lysidine synthetase [Bacillus anthracis str. A0442]
 gi|167641508|ref|ZP_02399756.1| tRNA(Ile)-lysidine synthetase [Bacillus anthracis str. A0193]
 gi|170688892|ref|ZP_02880094.1| tRNA(Ile)-lysidine synthetase [Bacillus anthracis str. A0465]
 gi|170707562|ref|ZP_02898015.1| tRNA(Ile)-lysidine synthetase [Bacillus anthracis str. A0389]
 gi|177655625|ref|ZP_02936988.1| tRNA(Ile)-lysidine synthetase [Bacillus anthracis str. A0174]
 gi|190569013|ref|ZP_03021914.1| tRNA(Ile)-lysidine synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227812737|ref|YP_002812746.1| tRNA(Ile)-lysidine synthetase [Bacillus anthracis str. CDC 684]
 gi|229602718|ref|YP_002864715.1| tRNA(Ile)-lysidine synthetase [Bacillus anthracis str. A0248]
 gi|254682310|ref|ZP_05146171.1| tRNA(Ile)-lysidine synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254735465|ref|ZP_05193173.1| tRNA(Ile)-lysidine synthetase [Bacillus anthracis str. Western
           North America USA6153]
 gi|254744633|ref|ZP_05202312.1| tRNA(Ile)-lysidine synthetase [Bacillus anthracis str. Kruger B]
 gi|254756338|ref|ZP_05208367.1| tRNA(Ile)-lysidine synthetase [Bacillus anthracis str. Vollum]
 gi|254762394|ref|ZP_05214236.1| tRNA(Ile)-lysidine synthetase [Bacillus anthracis str. Australia
           94]
 gi|61216616|sp|Q81VX7|TILS_BACAN RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|30253575|gb|AAP24117.1| tRNA(Ile)-lysidine synthetase [Bacillus anthracis str. Ames]
 gi|47500464|gb|AAT29140.1| tRNA(Ile)-lysidine synthetase [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49177024|gb|AAT52400.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
 gi|164711687|gb|EDR17232.1| tRNA(Ile)-lysidine synthetase [Bacillus anthracis str. A0488]
 gi|167510493|gb|EDR85891.1| tRNA(Ile)-lysidine synthetase [Bacillus anthracis str. A0193]
 gi|167529560|gb|EDR92310.1| tRNA(Ile)-lysidine synthetase [Bacillus anthracis str. A0442]
 gi|170127558|gb|EDS96432.1| tRNA(Ile)-lysidine synthetase [Bacillus anthracis str. A0389]
 gi|170667116|gb|EDT17877.1| tRNA(Ile)-lysidine synthetase [Bacillus anthracis str. A0465]
 gi|172080036|gb|EDT65135.1| tRNA(Ile)-lysidine synthetase [Bacillus anthracis str. A0174]
 gi|190559937|gb|EDV13921.1| tRNA(Ile)-lysidine synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227005702|gb|ACP15445.1| tRNA(Ile)-lysidine synthetase [Bacillus anthracis str. CDC 684]
 gi|229267126|gb|ACQ48763.1| tRNA(Ile)-lysidine synthetase [Bacillus anthracis str. A0248]
          Length = 476

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 53/197 (26%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSW-----ALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           D++K+  + ++  SGG DS   L +     A  +F+ V     D    +    +      
Sbjct: 17  DVLKERSTIVVGVSGGPDSLALLYYLLEKRAAKQFEIVVA-HVD----HMFRGDESHEDL 71

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           + + +L            I           ++       +             R  + L 
Sbjct: 72  QFVQDLCKGLGVICETIRINVSQYQKQYGMNAQVAARECRYAFLERIMKKYDAR-YVALG 130

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                     +  +V G     Y+G    R                    +  PL+ + K
Sbjct: 131 HHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNG--------------YLIRPLLGVTK 176

Query: 178 YETWKLAQDIGGQDLVN 194
            E      ++     ++
Sbjct: 177 EEIVNYCNELKIIPRID 193


>gi|94314845|ref|YP_588054.1| argininosuccinate synthetase [Cupriavidus metallidurans CH34]
 gi|93358697|gb|ABF12785.1| argininosuccinate synthetase [Cupriavidus metallidurans CH34]
          Length = 441

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +              +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAIPYAYTANLGQPDEPDYDDIPRRAMAYGAEAARLVD 72


>gi|328950301|ref|YP_004367636.1| Argininosuccinate synthase [Marinithermus hydrothermalis DSM 14884]
 gi|328450625|gb|AEB11526.1| Argininosuccinate synthase [Marinithermus hydrothermalis DSM 14884]
          Length = 398

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/161 (10%), Positives = 38/161 (23%), Gaps = 2/161 (1%)

Query: 10  SALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKI-VELMPKW 67
             +L +SGG D+S  L W  +     V   + D GQ  +VE   +  +            
Sbjct: 2   KIVLAYSGGLDTSIILKWLKETYGAEVIAFTADIGQGEEVEEARQKALATGATKAYALDL 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           K+    + + P+     +         ++           +  R     +          
Sbjct: 62  KEEFVREFVFPMMRAAPLYEGYYLLGTSIARPLIAKHLVAIAEREGAEAISHGATGKGND 121

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV 168
                +                       +  +       +
Sbjct: 122 QVRFELTAYALKPGIRVIAPWREWHFKGRSEMIAYAQDHGI 162


>gi|291300554|ref|YP_003511832.1| argininosuccinate synthase [Stackebrandtia nassauensis DSM 44728]
 gi|290569774|gb|ADD42739.1| argininosuccinate synthase [Stackebrandtia nassauensis DSM 44728]
          Length = 402

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 19/53 (35%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
               +L FSGG D+S  +   A      V  ++ D GQ  +     R     
Sbjct: 1  MTERVVLAFSGGLDTSVAIPYLAEQTGGEVIAVAIDVGQDGEDLNVIRQRALD 53


>gi|291288176|ref|YP_003504992.1| Queuosine synthesis-like protein [Denitrovibrio acetiphilus DSM
          12809]
 gi|290885336|gb|ADD69036.1| Queuosine synthesis-like protein [Denitrovibrio acetiphilus DSM
          12809]
          Length = 223

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 26/70 (37%), Gaps = 2/70 (2%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRK 58
          M     K  +A++  SGG DS+  L  A +    + V  ++       + ELE    +  
Sbjct: 1  MKAYFSKYNNAIVALSGGADSAAVLMLAAEHIGKNNVLAVTCVNQHFFESELENAAKIAA 60

Query: 59 KIVELMPKWK 68
           +      + 
Sbjct: 61 ILGVRHQSYT 70


>gi|167814354|ref|ZP_02446034.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei 91]
          Length = 510

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 44/175 (25%), Gaps = 7/175 (4%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           ++FSGG DS+  L  A      V  +SF  G     ++E       +   +         
Sbjct: 233 VMFSGGIDSAIVLRLAHRYHPDVTAISF--GLPGSNDIEIAHRYCAEHG-IRHVIYTFTK 289

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           +D +  +             +       +            + L    +     G  ++ 
Sbjct: 290 QDLLENIDDAVYYGEFFEKIDAIDSAIAHFGYYIANKLGLKVALCGEGSD-EIFGGYDLF 348

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
               +          +     ++      M + V    P M     E       +
Sbjct: 349 KTHAQPGALSLYRLNNLHRTDLQRVDRASMRNTVEARVPFMD---AELIDYVLSL 400


>gi|118475834|ref|YP_892985.1| cell cycle protein [Bacillus thuringiensis str. Al Hakam]
 gi|228931566|ref|ZP_04094473.1| tRNA(Ile)-lysidine synthase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228943870|ref|ZP_04106256.1| tRNA(Ile)-lysidine synthase [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|229089195|ref|ZP_04220477.1| tRNA(Ile)-lysidine synthase [Bacillus cereus Rock3-42]
 gi|229182458|ref|ZP_04309710.1| tRNA(Ile)-lysidine synthase [Bacillus cereus BGSC 6E1]
 gi|118415059|gb|ABK83478.1| cell cycle protein [Bacillus thuringiensis str. Al Hakam]
 gi|228601038|gb|EEK58606.1| tRNA(Ile)-lysidine synthase [Bacillus cereus BGSC 6E1]
 gi|228694158|gb|EEL47839.1| tRNA(Ile)-lysidine synthase [Bacillus cereus Rock3-42]
 gi|228815827|gb|EEM62062.1| tRNA(Ile)-lysidine synthase [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228828118|gb|EEM73845.1| tRNA(Ile)-lysidine synthase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 480

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 53/197 (26%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSW-----ALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           D++K+  + ++  SGG DS   L +     A  +F+ V     D    +    +      
Sbjct: 21  DVLKERSTIVVGVSGGPDSLALLYYLLEKRAAKQFEIVVA-HVD----HMFRGDESHEDL 75

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           + + +L            I           ++       +             R  + L 
Sbjct: 76  QFVQDLCKGLGVICETIRINVSQYQKQYGMNAQVAARECRYAFLERIMKKYDAR-YVALG 134

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                     +  +V G     Y+G    R                    +  PL+ + K
Sbjct: 135 HHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNG--------------YLIRPLLGVTK 180

Query: 178 YETWKLAQDIGGQDLVN 194
            E      ++     ++
Sbjct: 181 EEIVNYCNELKIIPRID 197


>gi|154248919|ref|YP_001409744.1| GMP synthase [Fervidobacterium nodosum Rt17-B1]
 gi|154152855|gb|ABS60087.1| GMP synthase, large subunit [Fervidobacterium nodosum Rt17-B1]
          Length = 522

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 52/182 (28%), Gaps = 14/182 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +L  SGG DSS           D+   +  D G   K E    +   ++I   +    
Sbjct: 223 RVILGLSGGVDSSVVAMLLHKAVPDKFIPIFVDTGLLRKNECIEVVKQFEEIGIHIHYVD 282

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            S     +L              ++   K +        V     + L         L  
Sbjct: 283 ASEKFLEVLD-----------GVEDPEEKRKRIGHTFIDVFYEEAMKLKEKYGDIKYLAQ 331

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   + E+  +         I+       L  +    +  PL +L K E   L Q+IG
Sbjct: 332 GTLYPDIIESKVAERK--AGAKIKTHHNVGGLPEKLPFEIIEPLRYLFKDEVRMLGQEIG 389

Query: 189 GQ 190
             
Sbjct: 390 LP 391


>gi|329925517|ref|ZP_08280391.1| tRNA(Ile)-lysidine synthetase [Paenibacillus sp. HGF5]
 gi|328939800|gb|EGG36140.1| tRNA(Ile)-lysidine synthetase [Paenibacillus sp. HGF5]
          Length = 476

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 50/188 (26%), Gaps = 25/188 (13%)

Query: 12  LLLFSGGQDSSTCLSW-----ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           ++  SGG DS   L             R+      +G R + + E      + + EL   
Sbjct: 30  VVAVSGGPDSVALLHVLHEISMHRTPLRLICAHVHHGFRRESDQE-----AEMVRELAES 84

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +  L E   + +    + S     K      ++          R       A       
Sbjct: 85  LRLPL-ETAFIDIPAYMEESG----KGGQEAAREKRYEFLLQTARKHNARSVALAHHADD 139

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               + + +                           E  V +  P + + K +  +L + 
Sbjct: 140 QAETVFMRLLRGSGLSGLGGIKFKR----------TEKKVELIRPFLRMYKADIVELCRV 189

Query: 187 IGGQDLVN 194
            G Q  V+
Sbjct: 190 CGFQYAVD 197


>gi|124385910|ref|YP_001028328.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           mallei NCTC 10229]
 gi|126448747|ref|YP_001081972.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           mallei NCTC 10247]
 gi|237810923|ref|YP_002895374.1| asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei MSHR346]
 gi|254360221|ref|ZP_04976491.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           mallei 2002721280]
 gi|124293930|gb|ABN03199.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           mallei NCTC 10229]
 gi|126241617|gb|ABO04710.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           mallei NCTC 10247]
 gi|148029461|gb|EDK87366.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           mallei 2002721280]
 gi|237506369|gb|ACQ98687.1| asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei MSHR346]
          Length = 510

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 44/175 (25%), Gaps = 7/175 (4%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           ++FSGG DS+  L  A      V  +SF  G     ++E       +   +         
Sbjct: 233 VMFSGGIDSAIVLRLAHRYHPDVTAISF--GLPGSNDIEIAHRYCAEHG-IRHVIYTFTK 289

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           +D +  +             +       +            + L    +     G  ++ 
Sbjct: 290 QDLLENIDDAVYYGEFFEKIDAIDSAIAHFGYYIANKLGLKVALCGEGSD-EIFGGYDLF 348

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
               +          +     ++      M + V    P M     E       +
Sbjct: 349 KTHAQPGALSLYRLNNLHRTDLQRVDRASMRNTVEARVPFMD---AELIDYVLSL 400


>gi|53724688|ref|YP_102067.1| asparagine synthase [Burkholderia mallei ATCC 23344]
 gi|67641475|ref|ZP_00440253.1| asparagine synthase (glutamine-hydrolyzing) [Burkholderia mallei
           GB8 horse 4]
 gi|121598552|ref|YP_994008.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           mallei SAVP1]
 gi|167003918|ref|ZP_02269697.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           mallei PRL-20]
 gi|254177034|ref|ZP_04883691.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           mallei ATCC 10399]
 gi|254203751|ref|ZP_04910111.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           mallei FMH]
 gi|254208727|ref|ZP_04915075.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           mallei JHU]
 gi|52428111|gb|AAU48704.1| asparagine synthase (glutamine-hydrolyzing) [Burkholderia mallei
           ATCC 23344]
 gi|121227362|gb|ABM49880.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           mallei SAVP1]
 gi|147745263|gb|EDK52343.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           mallei FMH]
 gi|147750603|gb|EDK57672.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           mallei JHU]
 gi|160698075|gb|EDP88045.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           mallei ATCC 10399]
 gi|238522416|gb|EEP85860.1| asparagine synthase (glutamine-hydrolyzing) [Burkholderia mallei
           GB8 horse 4]
 gi|243060645|gb|EES42831.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           mallei PRL-20]
          Length = 510

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 44/175 (25%), Gaps = 7/175 (4%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           ++FSGG DS+  L  A      V  +SF  G     ++E       +   +         
Sbjct: 233 VMFSGGIDSAIVLRLAHRYHPDVTAISF--GLPGSNDIEIAHRYCAEHG-IRHVIYTFTK 289

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           +D +  +             +       +            + L    +     G  ++ 
Sbjct: 290 QDLLENIDDAVYYGEFFEKIDAIDSAIAHFGYYIANKLGLKVALCGEGSD-EIFGGYDLF 348

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
               +          +     ++      M + V    P M     E       +
Sbjct: 349 KTHAQPGALSLYRLNNLHRTDLQRVDRASMRNTVEARVPFMD---AELIDYVLSL 400


>gi|325522923|gb|EGD01370.1| argininosuccinate synthase [Burkholderia sp. TJI49]
          Length = 445

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 24/67 (35%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + +       + FSGG D+S  L W   +       + + GQ ++ + +       +   
Sbjct: 6  ESLPTGQKVGIAFSGGLDTSAALHWMKLKGAVPYAYTANLGQPDEDDYDAIPKRALEYGA 65

Query: 63 LMPKWKD 69
             +  D
Sbjct: 66 AGARLID 72


>gi|253579384|ref|ZP_04856654.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849482|gb|EES77442.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 525

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 45/185 (24%), Gaps = 16/185 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS            ++  +  D+G   K E +    V            
Sbjct: 218 KVLLALSGGVDSSVAAGLLSRAIGKQLTCVFVDHGLLRKDEGDEVEGV------------ 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G +    L  +   +       +A    +       +    I      A     +  
Sbjct: 266 --FGPNGQFDLNFIRVNAQQRYYDKLAGVT-EPEAKRKIIGEEFIRIFEEEAKKIGAVDF 322

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   SG                         +  PL  L K E  K   ++G
Sbjct: 323 LAQGTIYPDVVESGLGGESAVIKSHHNVGGLPDFVDFKEIIEPLRDLFKDEVRKAGLELG 382

Query: 189 GQDLV 193
             + +
Sbjct: 383 IPERL 387


>gi|255073925|ref|XP_002500637.1| predicted protein [Micromonas sp. RCC299]
 gi|226515900|gb|ACO61895.1| predicted protein [Micromonas sp. RCC299]
          Length = 204

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 31/98 (31%), Gaps = 6/98 (6%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRK 58
           DI++ A   +L  SGG DS   L   ++        +  L F++G+R +   E      K
Sbjct: 15  DIVRHADRVVLCVSGGVDSVALLHLMVELRQEWALDLHILHFNHGKRAESREEEA--FVK 72

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAM 96
            +   +               +     + +        
Sbjct: 73  DLGAKLGVEVHVRRPTKAFDTSGFQAKARAWRRDEAEK 110


>gi|221197234|ref|ZP_03570281.1| argininosuccinate synthase [Burkholderia multivorans CGD2M]
 gi|221203906|ref|ZP_03576924.1| argininosuccinate synthase [Burkholderia multivorans CGD2]
 gi|221176072|gb|EEE08501.1| argininosuccinate synthase [Burkholderia multivorans CGD2]
 gi|221183788|gb|EEE16188.1| argininosuccinate synthase [Burkholderia multivorans CGD2M]
          Length = 445

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 24/67 (35%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + +       + FSGG D+S  L W   +       + + GQ ++ + +       +   
Sbjct: 6  ESLPTGQKVGIAFSGGLDTSAALHWMKLKGAVPYAYTANLGQPDEDDYDAIPKRALEYGA 65

Query: 63 LMPKWKD 69
             +  D
Sbjct: 66 AGARLID 72


>gi|308801447|ref|XP_003078037.1| asparagine synthetase (ISS) [Ostreococcus tauri]
 gi|116056488|emb|CAL52777.1| asparagine synthetase (ISS) [Ostreococcus tauri]
          Length = 649

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 52/190 (27%), Gaps = 12/190 (6%)

Query: 13  LLFSGGQDSSTCLSWALDR-------FDRVETLS-FDYGQRNKVELECRLCVRKKIVELM 64
           +L SGG DSS   S A+ +       +   E +  F  G +   +L     V +++  + 
Sbjct: 260 VLLSGGLDSSLITSIAVRQRKLAKNTYGADEPVHSFSIGIKGAPDLVAARKVAEQLGTIH 319

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            +      E+ +  L  +  I H    + V   +    L          + L        
Sbjct: 320 HEV-HFTPEEALDALPDV--IWHLETFEQVRASVPMYLLSRHIKSLGFKMVLSGEGAD-E 375

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G                   R          +     +          L   +   +A
Sbjct: 376 LFGGYLYFHKAPNPTEFHAECRRKTMRLHQWDVLRANKSTMSWGIEVRTPLLSQQVIDMA 435

Query: 185 QDIGGQDLVN 194
            ++  +D + 
Sbjct: 436 MNMRPEDKMI 445


>gi|161521550|ref|YP_001584977.1| argininosuccinate synthase [Burkholderia multivorans ATCC 17616]
 gi|189352280|ref|YP_001947907.1| argininosuccinate synthase [Burkholderia multivorans ATCC 17616]
 gi|221210900|ref|ZP_03583880.1| argininosuccinate synthase [Burkholderia multivorans CGD1]
 gi|30172780|sp|P59608|ASSY_BURM1 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|28971689|dbj|BAC65286.1| argininosuccinate synthase [Burkholderia multivorans]
 gi|160345600|gb|ABX18685.1| Argininosuccinate synthase [Burkholderia multivorans ATCC 17616]
 gi|189336302|dbj|BAG45371.1| argininosuccinate synthase [Burkholderia multivorans ATCC 17616]
 gi|221169856|gb|EEE02323.1| argininosuccinate synthase [Burkholderia multivorans CGD1]
          Length = 445

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 24/67 (35%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + +       + FSGG D+S  L W   +       + + GQ ++ + +       +   
Sbjct: 6  ESLPTGQKVGIAFSGGLDTSAALHWMKLKGAVPYAYTANLGQPDEDDYDAIPKRALEYGA 65

Query: 63 LMPKWKD 69
             +  D
Sbjct: 66 AGARLID 72


>gi|254255023|ref|ZP_04948340.1| Argininosuccinate synthase [Burkholderia dolosa AUO158]
 gi|124899668|gb|EAY71511.1| Argininosuccinate synthase [Burkholderia dolosa AUO158]
          Length = 445

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 24/67 (35%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + +       + FSGG D+S  L W   +       + + GQ ++ + +       +   
Sbjct: 6  ESLPTGQKVGIAFSGGLDTSAALHWMKLKGAVPYAYTANLGQPDEDDYDAIPKRALEYGA 65

Query: 63 LMPKWKD 69
             +  D
Sbjct: 66 AGARLID 72


>gi|317058226|ref|ZP_07922711.1| GMP synthase [Fusobacterium sp. 3_1_5R]
 gi|313683902|gb|EFS20737.1| GMP synthase [Fusobacterium sp. 3_1_5R]
          Length = 369

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 52/184 (28%), Gaps = 18/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS   +       D++  +  D G   K E      V +   E     
Sbjct: 73  KKVILGLSGGVDSSVAATLIHRAIGDQLTCIFVDTGLLRKNE---AKTVMEVYSENFHMN 129

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +    L+ L  +S     + +  K              +  FL         + 
Sbjct: 130 IKCVDAEERF-LSKLKGVSDPEQKRKIIGKEFIEVFNEEAKKFEDAEFLAQGTIYPDVIE 188

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                        S        TI++      L  +    +  PL  L K E  ++ + +
Sbjct: 189 -------------SVSVKGPSVTIKSHHNVGGLPEDMKFQLLEPLRELFKDEVREVGRQL 235

Query: 188 GGQD 191
           G   
Sbjct: 236 GIPH 239


>gi|301063984|ref|ZP_07204449.1| thiamine biosynthesis protein [delta proteobacterium NaphS2]
 gi|300441895|gb|EFK06195.1| thiamine biosynthesis protein [delta proteobacterium NaphS2]
          Length = 323

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
           A+ +FSGG DS   +     +   V  L F
Sbjct: 2  KAISVFSGGLDSMLAVELMRAQGIDVLALFF 32


>gi|257466980|ref|ZP_05631291.1| GMP synthase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315918119|ref|ZP_07914359.1| bifunctional GMP synthase/glutamine amidotransferase [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|313691994|gb|EFS28829.1| bifunctional GMP synthase/glutamine amidotransferase [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 512

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 52/184 (28%), Gaps = 18/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS   +       D++  +  D G   K E      V +   E     
Sbjct: 216 KKVILGLSGGVDSSVAATLIHRAIGDQLTCIFVDTGLLRKNE---AKTVMEVYSENFHMN 272

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +    L+ L  +S     + +  K              +  FL         + 
Sbjct: 273 IKCVDAEERF-LSKLKGVSDPEQKRKIIGKEFIEVFNEEAKKFEDAEFLAQGTIYPDVIE 331

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                        S        TI++      L  +    +  PL  L K E  ++ + +
Sbjct: 332 -------------SVSVKGPSVTIKSHHNVGGLPEDMKFQLLEPLRELFKDEVREVGRQL 378

Query: 188 GGQD 191
           G   
Sbjct: 379 GIPH 382


>gi|257451665|ref|ZP_05616964.1| GMP synthase [Fusobacterium sp. 3_1_5R]
          Length = 315

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 52/184 (28%), Gaps = 18/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS   +       D++  +  D G   K E      V +   E     
Sbjct: 19  KKVILGLSGGVDSSVAATLIHRAIGDQLTCIFVDTGLLRKNE---AKTVMEVYSENFHMN 75

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +    L+ L  +S     + +  K              +  FL         + 
Sbjct: 76  IKCVDAEERF-LSKLKGVSDPEQKRKIIGKEFIEVFNEEAKKFEDAEFLAQGTIYPDVIE 134

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                        S        TI++      L  +    +  PL  L K E  ++ + +
Sbjct: 135 -------------SVSVKGPSVTIKSHHNVGGLPEDMKFQLLEPLRELFKDEVREVGRQL 181

Query: 188 GGQD 191
           G   
Sbjct: 182 GIPH 185


>gi|228912803|ref|ZP_04076451.1| tRNA(Ile)-lysidine synthase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228846863|gb|EEM91867.1| tRNA(Ile)-lysidine synthase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 480

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 53/197 (26%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSW-----ALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           D++K+  + ++  SGG DS   L +     A  +F+ V     D    +    +      
Sbjct: 21  DVLKERSTIVVGVSGGPDSLALLYYLLEKRAAKQFEIVVA-HVD----HMFRGDESHEDL 75

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           + + +L            I           ++       +             R  + L 
Sbjct: 76  QFVQDLCKGLGVICETIRINVSQYQKQYGMNAQVAARECRYAFLERIMKKYDAR-YVALG 134

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                     +  +V G     Y+G    R                    +  PL+ + K
Sbjct: 135 HHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNG--------------YLIRPLLGVTK 180

Query: 178 YETWKLAQDIGGQDLVN 194
            E      ++     ++
Sbjct: 181 EEIVNYCNELKIIPRID 197


>gi|149247160|ref|XP_001528005.1| argininosuccinate synthase [Lodderomyces elongisporus NRRL
          YB-4239]
 gi|146447959|gb|EDK42347.1| argininosuccinate synthase [Lodderomyces elongisporus NRRL
          YB-4239]
          Length = 422

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 3/62 (4%)

Query: 1  MNDIIKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
          M          +LL +SGG D+S   +W +++   V     + GQ  + + E        
Sbjct: 1  MYCTNTNNNHIVLLSYSGGLDTSVIAAWLIEQDYEVIAFLANIGQ--EEDFEKAEKKALA 58

Query: 60 IV 61
          I 
Sbjct: 59 IG 60


>gi|49476703|ref|YP_034416.1| cell cycle protein [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|196036405|ref|ZP_03103802.1| tRNA(Ile)-lysidine synthetase [Bacillus cereus W]
 gi|196041776|ref|ZP_03109066.1| tRNA(Ile)-lysidine synthetase [Bacillus cereus NVH0597-99]
 gi|196047393|ref|ZP_03114606.1| tRNA(Ile)-lysidine synthetase [Bacillus cereus 03BB108]
 gi|218901265|ref|YP_002449099.1| tRNA(Ile)-lysidine synthetase [Bacillus cereus AH820]
 gi|225862116|ref|YP_002747494.1| tRNA(Ile)-lysidine synthetase [Bacillus cereus 03BB102]
 gi|301051801|ref|YP_003790012.1| cell cycle protein [Bacillus anthracis CI]
 gi|61216513|sp|Q6HPV4|TILS_BACHK RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|49328259|gb|AAT58905.1| cell cycle protein [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|195991035|gb|EDX55006.1| tRNA(Ile)-lysidine synthetase [Bacillus cereus W]
 gi|196021795|gb|EDX60489.1| tRNA(Ile)-lysidine synthetase [Bacillus cereus 03BB108]
 gi|196027396|gb|EDX66013.1| tRNA(Ile)-lysidine synthetase [Bacillus cereus NVH0597-99]
 gi|218539357|gb|ACK91755.1| tRNA(Ile)-lysidine synthetase [Bacillus cereus AH820]
 gi|225790908|gb|ACO31125.1| tRNA(Ile)-lysidine synthetase [Bacillus cereus 03BB102]
 gi|300373970|gb|ADK02874.1| cell cycle protein [Bacillus cereus biovar anthracis str. CI]
          Length = 476

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 53/197 (26%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSW-----ALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           D++K+  + ++  SGG DS   L +     A  +F+ V     D    +    +      
Sbjct: 17  DVLKERSTIVVGVSGGPDSLALLYYLLEKRAAKQFEIVVA-HVD----HMFRGDESHEDL 71

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           + + +L            I           ++       +             R  + L 
Sbjct: 72  QFVQDLCKGLGVICETIRINVSQYQKQYGMNAQVAARECRYAFLERIMKKYDAR-YVALG 130

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                     +  +V G     Y+G    R                    +  PL+ + K
Sbjct: 131 HHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNG--------------YLIRPLLGVTK 176

Query: 178 YETWKLAQDIGGQDLVN 194
            E      ++     ++
Sbjct: 177 EEIVNYCNELKIIPRID 193


>gi|16272353|ref|NP_438566.1| cell cycle protein [Haemophilus influenzae Rd KW20]
 gi|260580533|ref|ZP_05848361.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidine synthetase)
          [Haemophilus influenzae RdAW]
 gi|1175240|sp|P44689|TILS_HAEIN RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
          Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
          Full=tRNA(Ile)-lysidine synthetase
 gi|1573375|gb|AAC22063.1| cell cycle protein (mesJ) [Haemophilus influenzae Rd KW20]
 gi|260092875|gb|EEW76810.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidine synthetase)
          [Haemophilus influenzae RdAW]
          Length = 430

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 8/84 (9%)

Query: 1  MNDIIKKAPSA-----LLLFSGGQDSSTCL---SWALDRFDRVETLSFDYGQRNKVELEC 52
          ++DI K+   A     L+  SGG DS+  L   +    +   +  LS      +      
Sbjct: 4  LSDIEKQLQKATAQAFLIALSGGLDSTVLLSLFAKLCQKQPHLPPLSIRAIHIHHGLSPN 63

Query: 53 RLCVRKKIVELMPKWKDSLGEDHI 76
               K   +L  +++  L  + +
Sbjct: 64 ADSWAKHCQDLCDQFQIPLIIERV 87


>gi|121603991|ref|YP_981320.1| argininosuccinate synthase [Polaromonas naphthalenivorans CJ2]
 gi|226729197|sp|A1VL71|ASSY_POLNA RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|120592960|gb|ABM36399.1| argininosuccinate synthase [Polaromonas naphthalenivorans CJ2]
          Length = 445

 Score = 44.5 bits (103), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 27/72 (37%), Gaps = 3/72 (4%)

Query: 1  MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I++  P      + FSGG D+S  L W   +       + + GQ ++ + E      
Sbjct: 1  MATILQNLPIGQKVGIAFSGGLDTSAALHWMKLKGAIPYAYTANLGQPDEPDYEDIPRKA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 MQYGAEQARLID 72


>gi|307946670|ref|ZP_07662005.1| NAD(+) synthase (glutamine-hydrolyzing) [Roseibium sp. TrichSKD4]
 gi|307770334|gb|EFO29560.1| NAD(+) synthase (glutamine-hydrolyzing) [Roseibium sp. TrichSKD4]
          Length = 555

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 17/145 (11%), Positives = 40/145 (27%), Gaps = 4/145 (2%)

Query: 12  LLL-FSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           ++L  SGG DS+ C + A+D    D+V  +   Y   ++  ++        +        
Sbjct: 290 VVLGLSGGIDSAICAAMAVDALGADKVHAIMLPYRYTSEESIKDAAECAAALGIRYDTVP 349

Query: 69  -DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +         L+ L   + S  T+          +          + +         +G
Sbjct: 350 IEEPVLGFTNVLSDLFAGTKSDTTEENLQSRARGVILMAVSNKFGHMVVTTGNKSEMSVG 409

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIR 152
              +   +           +     
Sbjct: 410 YATLYGDMNGGYNPIKDLYKTQVYH 434


>gi|255523359|ref|ZP_05390329.1| NAD+ synthetase [Clostridium carboxidivorans P7]
 gi|296188293|ref|ZP_06856685.1| NAD+ synthetase [Clostridium carboxidivorans P7]
 gi|255513013|gb|EET89283.1| NAD+ synthetase [Clostridium carboxidivorans P7]
 gi|296047419|gb|EFG86861.1| NAD+ synthetase [Clostridium carboxidivorans P7]
          Length = 637

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 23/67 (34%), Gaps = 7/67 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF-------DRVETLSFDYGQRNKVELECRLCVRKKIV 61
             A++  SGG DS+  L   +  F       + + T++              + + KK+ 
Sbjct: 351 KKAVVGISGGLDSTLALLVMIKTFRMLNIQSENIITVTMPGFGTTDRTYNNAVNLCKKLG 410

Query: 62  ELMPKWK 68
               +  
Sbjct: 411 TEFREIN 417


>gi|153811188|ref|ZP_01963856.1| hypothetical protein RUMOBE_01580 [Ruminococcus obeum ATCC 29174]
 gi|149832686|gb|EDM87770.1| hypothetical protein RUMOBE_01580 [Ruminococcus obeum ATCC 29174]
          Length = 481

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 45/185 (24%), Gaps = 16/185 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS            ++  +  D+G   K E +    V            
Sbjct: 174 KVLLALSGGVDSSVAAGLLSRAIGKQLTCVFVDHGLLRKDEGDEVEGV------------ 221

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G +    L  +   +       +A    +       +    I      A     +  
Sbjct: 222 --FGPNGQFDLNFIRVNAQQRYYDKLAGVT-EPEAKRKIIGEEFIRIFEEEAKKIGAVDF 278

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   SG                         +  PL  L K E  K   ++G
Sbjct: 279 LAQGTIYPDVVESGLGGESAVIKSHHNVGGLPDFVDFKEIIEPLRDLFKDEVRKAGLELG 338

Query: 189 GQDLV 193
             + +
Sbjct: 339 IPERL 343


>gi|89898460|ref|YP_515570.1| tRNA-specific 2-thiouridylase MnmA [Chlamydophila felis Fe/C-56]
 gi|123483134|sp|Q253W3|MNMA_CHLFF RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|89331832|dbj|BAE81425.1| tRNA/rRNA methyltransferase [Chlamydophila felis Fe/C-56]
          Length = 361

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 51/187 (27%), Gaps = 9/187 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
              + ++  SGG DSS       +    +V  L     +    E  C     K   ++  
Sbjct: 1   MNKTVVVAMSGGVDSSVVAYLLKNYTSYKVLGLFMKNWEEEDGEGLCST--AKDYEDVEK 58

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                    + +  +   +      ++ +    +        +  R I F +    +   
Sbjct: 59  VAGQLDIPYYTV--SFAKEYRERVFSRFLTGYSEGYTPNPDVLCNREIKFDLLQKKVREL 116

Query: 126 LGITNIVIGVCE--TDYSGYPDCRHDTIRAIETAINLGMESH--VTVHTPLMWLKKYETW 181
            G        C    D +G    R    +  ++    G        V  PL    K E  
Sbjct: 117 GGDFLATGHYCRVSPDENGVNLLRGIDPQKDQSYFLCGTRKESLENVIFPLGDKTKTEVR 176

Query: 182 KLAQDIG 188
            +A   G
Sbjct: 177 SIAAQAG 183


>gi|26553576|ref|NP_757510.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Mycoplasma penetrans HF-2]
 gi|44887963|sp|Q8EWS9|GUAA_MYCPE RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|26453582|dbj|BAC43914.1| GMP synthase [Mycoplasma penetrans HF-2]
          Length = 511

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 55/178 (30%), Gaps = 19/178 (10%)

Query: 11  ALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            L   SGG DS       A    D++  +  D+G   K E +    + KK++        
Sbjct: 216 VLCAISGGVDSLVAAVLTAQAIGDKLYCVFVDHGLLRKNESQEVCALLKKLIGK----NI 271

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            L +   L L+ L  +      + +               G+  I +         +   
Sbjct: 272 FLVDQKQLFLSKLKGVVDPEQKRKI--------------IGKTFIEVFEKVANKINVPFK 317

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            ++ G    D          TI++      L       +  PL +L K E  KL   +
Sbjct: 318 YLLQGTIYPDIVESGSKFSKTIKSHHNVGGLPERLQFELLEPLKYLFKDEVRKLGLSL 375


>gi|254181731|ref|ZP_04888328.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei 1655]
 gi|184212269|gb|EDU09312.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei 1655]
          Length = 510

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 44/175 (25%), Gaps = 7/175 (4%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           ++FSGG DS+  L  A      V  +SF  G     ++E       +   +         
Sbjct: 233 VMFSGGIDSAIVLRLAHRYHPDVTAISF--GLPGSNDIEIAHRYCAEHG-IRHVIYTFTK 289

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           +D +  +             +       +            + L    +     G  ++ 
Sbjct: 290 QDLLENIDDAVYYGEFFEKIDAIDSAIAHFGYYIANKLGLKVALCGEGSD-EIFGGYDLF 348

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
               +          +     ++      M + V    P M     E       +
Sbjct: 349 KTHAQPGALSLYRLNNLHRTDLQRVDRASMRNTVEARVPFMD---AELIDYVLSL 400


>gi|313224567|emb|CBY20357.1| unnamed protein product [Oikopleura dioica]
 gi|313247180|emb|CBY35998.1| unnamed protein product [Oikopleura dioica]
          Length = 385

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 19/191 (9%), Positives = 40/191 (20%), Gaps = 8/191 (4%)

Query: 10  SALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              +  SGG DS+       L +   V  +          + E  +C      +   +  
Sbjct: 11  RVAVALSGGVDSAVAAVLLKLQQGHEVIGVHSRNW---DSKDENGVCQADADYDSARRVA 67

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E   + L  +  +                N  +  +       + F A L      
Sbjct: 68  ----EHLKIELVGINCVKEYWTEVFEPFLESTQNANSFNIDQLCNERIKFDAMLKKAKDQ 123

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
            +          S              +   L   +           K   +        
Sbjct: 124 IHFDKFATGHYASIRKVEPVGQKLIATSRRCLSESTCFRTQNESTLSKTKRSISHGSARH 183

Query: 189 GQDLVNLILEE 199
              ++ +I   
Sbjct: 184 KSRMIRVIFPL 194


>gi|303235677|ref|ZP_07322284.1| tRNA(Ile)-lysidine synthetase [Prevotella disiens FB035-09AN]
 gi|302484124|gb|EFL47112.1| tRNA(Ile)-lysidine synthetase [Prevotella disiens FB035-09AN]
          Length = 461

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 35/112 (31%), Gaps = 6/112 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR---NKVELECRLCVRKKI 60
           ++ +    ++  SGG DS   L         +E    ++  R   +  + E    + +K+
Sbjct: 14  LLHEDGKYIVGLSGGADSVALLLVLKHLGYNIEAAHCNFNLRGEESNRDEEYCKKLCEKL 73

Query: 61  VELMPKWKDSLG---EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
                          E H + + +          +N+   IQ + +      
Sbjct: 74  NVPFHLIHFDTILYAELHKVSIEMAARTLRYGYFENLRRDIQADAICIAHHR 125


>gi|270159635|ref|ZP_06188291.1| GMP synthase [Legionella longbeachae D-4968]
 gi|289165579|ref|YP_003455717.1| GMP synthetase (glutamine-hydrolyzing) [Legionella longbeachae
           NSW150]
 gi|269987974|gb|EEZ94229.1| GMP synthase [Legionella longbeachae D-4968]
 gi|288858752|emb|CBJ12657.1| putative GMP synthetase (glutamine-hydrolyzing) [Legionella
           longbeachae NSW150]
          Length = 525

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 22/185 (11%), Positives = 47/185 (25%), Gaps = 16/185 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS   +        ++  +  D G    + +     V     + M  
Sbjct: 226 TEKVLLGLSGGVDSSVVAALLHKAIGKQLICVFVDTG---LLRIHEADEVMNMFGKNMGI 282

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              ++  +     A+ G        K +     +                          
Sbjct: 283 QVIAVKAEDKFLNALKGVTCPEEKRKIIGHTFIEVFDEEAHKIPGVSWL----------- 331

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                +        +   +     I++      L    ++ +  P+  L K E   +  +
Sbjct: 332 -AQGTIYPDVIESAATNTNGASMVIKSHHNVGGLPETLNLKLLEPIRELFKDEVRNIGLE 390

Query: 187 IGGQD 191
           +G   
Sbjct: 391 LGLPH 395


>gi|28493382|ref|NP_787543.1| tRNA-specific 2-thiouridylase MnmA [Tropheryma whipplei str. Twist]
 gi|81436231|sp|Q820Y1|MNMA_TROWT RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|28476423|gb|AAO44512.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Tropheryma whipplei str. Twist]
          Length = 359

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 20/146 (13%), Positives = 39/146 (26%), Gaps = 5/146 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L   SGG DS+   + A+D    V  +       ++     R C   +  +   +   
Sbjct: 2   KVLAAMSGGVDSAVAAARAVDMGHDVVGVHLA---LSRSASGKRGCCTPRDAQDAAQAAQ 58

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++G    +      +     +  N   +      PN  +     I        A  LG  
Sbjct: 59  AIGIPFYVW--DFSEEFQEKVIDNFISEYSAGRTPNPCLRCNEHIKFSSLLRRALALGFD 116

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIE 155
            +  G     +            +  
Sbjct: 117 AVCTGHYARVFLDEDGTYQLHRASSW 142


>gi|54307976|ref|YP_128996.1| GMP synthase [Photobacterium profundum SS9]
 gi|50400315|sp|Q6LU31|GUAA_PHOPR RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|46912402|emb|CAG19194.1| putative GMP synthase [Photobacterium profundum SS9]
          Length = 527

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 51/181 (28%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS           D++  +  D G     E E              +  D
Sbjct: 232 VILGLSGGVDSSVVAMLLHRAIGDKLTCVFVDNGLLRLNEGE--------------QVMD 277

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+   L +  +                +                       A  L   
Sbjct: 278 MFGDHFGLNIVHVKAEDRFLNALAGENDPEAKRKIIGHAFIDVFDEESKKLKNAKWLAQG 337

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S   + +   I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 338 TIYPDVIESAAS--KNGKAHVIKSHHNVGGLPDDMEMGLVEPLRELFKDEVRKIGLELGL 395

Query: 190 Q 190
            
Sbjct: 396 P 396


>gi|18314022|ref|NP_560689.1| GMP synthase [Pyrobaculum aerophilum str. IM2]
 gi|21759181|sp|Q8ZT92|GUAA_PYRAE RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|18161600|gb|AAL64871.1| GMP synthetase (glutamine-hydrolysing) [Pyrobaculum aerophilum str.
           IM2]
          Length = 505

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 57/190 (30%), Gaps = 22/190 (11%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            ++  SGG DS+            RV+ +  D+G   + E E    + K I         
Sbjct: 213 VIVGVSGGVDSTVTAVLLYKAVGQRVKAVFIDHGLFREGEPEEAASLLKSIG-----IDV 267

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              +     L  L  ++     + +  +       +      N+ +L         +   
Sbjct: 268 VYIDAKERFLKRLEGVADCEEKRRIIGETFAEVFSDAVKQMPNVKYLAQGTLYPDVVESG 327

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +                 D I++      L     + +  PL    K E  ++A+ +G 
Sbjct: 328 AV--------------KGADKIKSHHNVGGLPPWFQLELIEPLREFYKDEVRRIAKALGL 373

Query: 190 QDLVNLILEE 199
            +  +++   
Sbjct: 374 PE--DVVYRH 381


>gi|328544048|ref|YP_004304157.1| GMP synthase-glutamine amidotransferase protein [polymorphum gilvum
           SL003B-26A1]
 gi|326413792|gb|ADZ70855.1| GMP synthase-glutamine amidotransferase protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 515

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 55/185 (29%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DSS       +   D++  +  D+G   K E        K++V L   
Sbjct: 217 SGRVICGLSGGVDSSVAAVLIHEAIGDQLTCIFVDHGLMRKGE-------AKEVVSLFR- 268

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   + +PL  +                +        +              A  L
Sbjct: 269 ------GHYNIPLVHVDAADTFIDALEGESDPEVKRKTIGRLFIEVFEAEATKLGGADFL 322

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+    +      TI++      L     + +  PL  L K E   L ++
Sbjct: 323 AQGTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMKMKLVEPLRELFKDEVRALGRE 380

Query: 187 IGGQD 191
           +G  D
Sbjct: 381 LGLPD 385


>gi|256811396|ref|YP_003128765.1| PP-loop domain protein [Methanocaldococcus fervens AG86]
 gi|256794596|gb|ACV25265.1| PP-loop domain protein [Methanocaldococcus fervens AG86]
          Length = 296

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 25/78 (32%), Gaps = 2/78 (2%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKK 59
             ++ K    L+  SGG+D              +E    + G ++  E+  E    + +K
Sbjct: 42  YKMLNKDEKILVAVSGGKDGHAAAWVLKKLGYNIELFHINLGIKDFSEISLETVKKLAEK 101

Query: 60  IVELMPKWKDSLGEDHIL 77
           +   +            +
Sbjct: 102 LEVPLHVVNLKDITGKTM 119


>gi|298528464|ref|ZP_07015868.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Desulfonatronospira thiodismutans ASO3-1]
 gi|298512116|gb|EFI36018.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Desulfonatronospira thiodismutans ASO3-1]
          Length = 344

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 34/126 (26%), Gaps = 12/126 (9%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +  SGG DS   L    +    V  L   +  R    LE R         L         
Sbjct: 5   VAVSGGLDSLASLVMLREEGHDVLALHARFFPRLDEHLEKR---------LKGICTSLGV 55

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           E H+    +L D   + +         D   PN        I        A  LG + + 
Sbjct: 56  EMHV---TLLQDEFAARVIDPFVQDYLDGLTPNPCARCNMRIKFGLLLDRALELGASALA 112

Query: 133 IGVCET 138
            G    
Sbjct: 113 TGHYAG 118


>gi|111017964|ref|YP_700936.1| argininosuccinate synthase [Rhodococcus jostii RHA1]
 gi|226360095|ref|YP_002777873.1| argininosuccinate synthase [Rhodococcus opacus B4]
 gi|119361316|sp|Q0SI58|ASSY_RHOSR RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|254807529|sp|C1ASZ6|ASSY_RHOOB RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|110817494|gb|ABG92778.1| argininosuccinate synthase [Rhodococcus jostii RHA1]
 gi|226238580|dbj|BAH48928.1| argininosuccinate synthase [Rhodococcus opacus B4]
          Length = 399

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 18/53 (33%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           A   +L +SGG D S        +    V  ++ D GQ  +     R     
Sbjct: 1  MADRVVLAYSGGLDTSVAISWIGKETGKEVVAVAIDLGQGGEDMEVVRQRALD 53


>gi|312139868|ref|YP_004007204.1| argininosuccinate synthase argg [Rhodococcus equi 103S]
 gi|311889207|emb|CBH48521.1| argininosuccinate synthase ArgG [Rhodococcus equi 103S]
          Length = 399

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 18/53 (33%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           A   +L +SGG D S        +    V  ++ D GQ  +     R     
Sbjct: 1  MAERVVLAYSGGLDTSVAISWIGKETGKEVVAVAIDLGQGGEDMEVVRQRALD 53


>gi|312128589|ref|YP_003993463.1| nad+ synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311778608|gb|ADQ08094.1| NAD+ synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 540

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 16/147 (10%), Positives = 38/147 (25%), Gaps = 2/147 (1%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDR-VETLSFDYGQRNKVELECRLCVRKKIVELMP 65
              A++  SGG DSS     A++      V  +S      ++  ++    + + +     
Sbjct: 285 TKKAVVGLSGGIDSSVVCCLAVEALGRENVLGVSMPSRYSSEHSIKDAKSLAENLGIEFR 344

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            +         L +    +     L +         N+        N + L         
Sbjct: 345 IYPIEDVFRAYLRMFNTSETPLQDLAEENIQARIRGNILMFISNRENRLVLTTGNKSELA 404

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIR 152
           +G   +   +           +     
Sbjct: 405 VGYCTLYGDMAGGLAVISDLPKMLVYE 431


>gi|325674254|ref|ZP_08153943.1| argininosuccinate synthase [Rhodococcus equi ATCC 33707]
 gi|325554934|gb|EGD24607.1| argininosuccinate synthase [Rhodococcus equi ATCC 33707]
          Length = 399

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 18/53 (33%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           A   +L +SGG D S        +    V  ++ D GQ  +     R     
Sbjct: 1  MAERVVLAYSGGLDTSVAISWIGKETGKEVVAVAIDLGQGGEDMEVVRQRALD 53


>gi|254469025|ref|ZP_05082431.1| GMP synthase [beta proteobacterium KB13]
 gi|207087835|gb|EDZ65118.1| GMP synthase [beta proteobacterium KB13]
          Length = 496

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 54/182 (29%), Gaps = 18/182 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D+G    +  +    V     E +     
Sbjct: 201 VILGLSGGVDSSVAAALLHRAIGDQLTCIFVDHG---LLRKDEATKVLSLFKENLGVKVI 257

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +       +  L  I      + +  +       +      N  +L             
Sbjct: 258 HVDATKKF-MDDLKGIDDPEEKRKIIGRNFVEVFQDESKKITNAKWLAQGTIY------- 309

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                    + +G    +   I++      L    H+ +  PL  L K E  KL   +G 
Sbjct: 310 -----PDVIESAGGKTKKGHNIKSHHNVGGLPETLHLKLLEPLRELFKDEVRKLGVALGL 364

Query: 190 QD 191
            +
Sbjct: 365 PN 366


>gi|15679609|ref|NP_276726.1| hypothetical protein MTH1614 [Methanothermobacter
           thermautotrophicus str. Delta H]
 gi|2622739|gb|AAB86087.1| conserved protein [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 201

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 35/117 (29%), Gaps = 6/117 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR-----KKIVELMP 65
           A +L+SGG+DSS           + E ++ ++G  +                 ++++L  
Sbjct: 3   ACVLYSGGKDSSLAAVMLQRLGIQPELVTVNFG-IHDSWKPASDAAASLGFPHRVLKLGD 61

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +      E  I        I H       A   + + + +          L      
Sbjct: 62  EILRDAAETIINDGFPNNGIKHIHRMAVEAAATEYDMVADGTRRDDRTPKLTRDEIQ 118


>gi|328910625|gb|AEB62221.1| GMP synthetase [Bacillus amyloliquefaciens LL3]
          Length = 516

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 53/185 (28%), Gaps = 22/185 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E E                
Sbjct: 222 KQVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGEAE---------------- 265

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL- 126
               G           ++           K++  + P          F+      A +L 
Sbjct: 266 ----GVMKTFSEGFNMNVIKVDAKDRFLNKLKGVSDPEQKRKIIGNEFIYVFDDEAVKLK 321

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI  +  G   TD          TI++      L  +    +  PL  L K E   L  +
Sbjct: 322 GIDYLAQGTLYTDIIESGTATAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRALGTE 381

Query: 187 IGGQD 191
           +G  D
Sbjct: 382 LGIPD 386


>gi|327537782|gb|EGF24487.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Rhodopirellula baltica WH47]
          Length = 506

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 49/187 (26%), Gaps = 17/187 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS   +        ++  +  D G   K E +               
Sbjct: 208 NKRVICGLSGGVDSSVVAALLYKAIGPQLSCILVDNGLLRKNEQQ--------------I 253

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +         L I+              + Q+                      A+ L
Sbjct: 254 VLEEFSNHFKTDLHIVEAEDRFLADLAGIDEPQEKRRRIGHAFIECFKDEAAKIEDAHFL 313

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+      D    TI+       L  E    +  PL  L K E  +L  +
Sbjct: 314 AQGTLYPDVIESGA--DKDGPAATIKLHHNVGGLPEELGFELIEPLRDLFKDEVRRLGLE 371

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 372 LGLPEQL 378


>gi|326434852|gb|EGD80422.1| argininosuccinate synthetase 1 [Salpingoeca sp. ATCC 50818]
          Length = 427

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 36/121 (29%), Gaps = 4/121 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             + +L +SGG D+S  L W +++   V      Y +    E   R  +   +      +
Sbjct: 14  NKTVVLAYSGGLDTSCILVWLIEQGYDVVAYLAVYIED-LKEEFIRDFIYPTVQAAKAVY 72

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            + L E+ I         +  +        +    +    +  R I             G
Sbjct: 73  IEDLKEEFIRDFIY---PTVQANAIYEDRYLMGTAIARPCIARRQIEIAKKENAGFVSHG 129

Query: 128 I 128
            
Sbjct: 130 A 130


>gi|320155609|ref|YP_004187988.1| tRNA(Ile)-lysidine synthetase [Vibrio vulnificus MO6-24/O]
 gi|319930921|gb|ADV85785.1| tRNA(Ile)-lysidine synthetase [Vibrio vulnificus MO6-24/O]
          Length = 436

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 18/56 (32%), Gaps = 4/56 (7%)

Query: 6  KKAPSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVR 57
          K     ++ FSGG DS   L  A             +   +G  +  +   + C  
Sbjct: 17 KANTRLVVAFSGGVDSRVLLELAHRYAQEHLLPCCAVHVHHGLSHNADQWVQSCAA 72


>gi|315640189|ref|ZP_07895309.1| GMP synthase [Enterococcus italicus DSM 15952]
 gi|315484071|gb|EFU74547.1| GMP synthase [Enterococcus italicus DSM 15952]
          Length = 515

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 55/188 (29%), Gaps = 21/188 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++ ++  D+G   K E      V   +       
Sbjct: 218 KKVLLGLSGGVDSSVVGVLLQKAIGDQLTSIFVDHGLLRKGE---ADQVMDALGGKFGLN 274

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL--AYR 125
              +         + G                 +      + G   ++L        A  
Sbjct: 275 IIKVDAKDRFLSKLAG---------------VSDPEQKRKIIGNEFVYLFDDEATKLAGE 319

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            GI+ +  G   TD          TI++      L  +    +  PL  L K E   L  
Sbjct: 320 EGISFLAQGTLYTDVIESGTETAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRALGT 379

Query: 186 DIGGQDLV 193
           ++G  D +
Sbjct: 380 ELGMPDSI 387


>gi|315636127|ref|ZP_07891381.1| LPS biosynthesis protein WbpG [Arcobacter butzleri JV22]
 gi|315479488|gb|EFU70167.1| LPS biosynthesis protein WbpG [Arcobacter butzleri JV22]
          Length = 381

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 24/182 (13%), Positives = 45/182 (24%), Gaps = 9/182 (4%)

Query: 2   NDIIKKAP-----SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
            + +KK         +L  SGG DSS       +   R   +  D G  +++ ++    +
Sbjct: 57  YEKMKKENAHKDYDCILGLSGGVDSSYLALKLYEAGIRPLVVHVDGGWNSELAVQNIENI 116

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
                  +        E   L LA L     S++      +             +  I  
Sbjct: 117 VNYCGWHLHTIVIDWEEMRDLQLAYLK----SAIANQDVPQDHAFFASLYHFATKYGINY 172

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
           V +        I          D        +                 +  + P +   
Sbjct: 173 VISGGNLATESIFPKAWHWSAMDADNLHAIHNKFGTKKLKNYKTIGFYELYFYYPFIKKM 232

Query: 177 KY 178
           K 
Sbjct: 233 KT 234


>gi|308172519|ref|YP_003919224.1| GMP synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307605383|emb|CBI41754.1| GMP synthetase [Bacillus amyloliquefaciens DSM 7]
          Length = 513

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 53/185 (28%), Gaps = 22/185 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E E                
Sbjct: 219 KQVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGEAE---------------- 262

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL- 126
               G           ++           K++  + P          F+      A +L 
Sbjct: 263 ----GVMKTFSEGFNMNVIKVDAKDRFLNKLKGVSDPEQKRKIIGNEFIYVFDDEAVKLK 318

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI  +  G   TD          TI++      L  +    +  PL  L K E   L  +
Sbjct: 319 GIDYLAQGTLYTDIIESGTATAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRALGTE 378

Query: 187 IGGQD 191
           +G  D
Sbjct: 379 LGIPD 383


>gi|297742514|emb|CBI34663.3| unnamed protein product [Vitis vinifera]
          Length = 493

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 18/50 (36%), Gaps = 1/50 (2%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELEC 52
           ++      +   SGG DS+   +       DR+  +  D G     E E 
Sbjct: 182 MVAPDDHVICALSGGVDSTVAATLVHKAIGDRLHCVFVDNGLLRYKERER 231


>gi|270264801|ref|ZP_06193065.1| tRNA(Ile)-lysidine synthetase [Serratia odorifera 4Rx13]
 gi|270041099|gb|EFA14199.1| tRNA(Ile)-lysidine synthetase [Serratia odorifera 4Rx13]
          Length = 441

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 25/68 (36%), Gaps = 5/68 (7%)

Query: 12 LLLFSGGQDSSTCLSWA--LDR---FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
          L+ FSGG DSS  L     L R     ++  +   +G     +     C R+     +P 
Sbjct: 26 LVAFSGGLDSSVLLHLLVGLRRQWPDLQLRAVHVHHGLSAFADEWVAHCQRQCAAWQLPL 85

Query: 67 WKDSLGED 74
              +  D
Sbjct: 86 VVQHVQVD 93


>gi|229814981|ref|ZP_04445319.1| hypothetical protein COLINT_02024 [Collinsella intestinalis DSM
          13280]
 gi|229809468|gb|EEP45232.1| hypothetical protein COLINT_02024 [Collinsella intestinalis DSM
          13280]
          Length = 434

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 2/58 (3%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVR 57
          MN+   K    +L +SGG D+S C+ W        V  +  + GQ +    +     R
Sbjct: 1  MNNQQSK-EKVVLAYSGGLDTSVCIKWLQHEMDLDVIAMLGNVGQEHDGLEKVAEKAR 57


>gi|187250509|ref|YP_001874991.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Elusimicrobium minutum Pei191]
 gi|186970669|gb|ACC97654.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Elusimicrobium minutum Pei191]
          Length = 354

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 21/169 (12%), Positives = 45/169 (26%), Gaps = 10/169 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR-----KKIVELM 64
             L+  SGG DSS   +   D+   V   +      +                + I    
Sbjct: 2   KILVGLSGGVDSSLTAALLKDKGYEVTGATMSIWDPSLPTPATPNNACLGPEEEDIKTAS 61

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              K+     H++      +     + +N   + +    PN  +   + I        A 
Sbjct: 62  AVAKEIGIGFHVID---CREEYKKIVIENFKDEYKKGRTPNPCIWCNSFIKFGALPASAK 118

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
           + G   I        Y+            +  A++   +    ++    
Sbjct: 119 KQG--VIFDKFATGHYARIIFNEETGRYQLRKALDEAKDQTYFLYRLTQ 165


>gi|225426434|ref|XP_002274590.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 534

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 18/50 (36%), Gaps = 1/50 (2%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELEC 52
           ++      +   SGG DS+   +       DR+  +  D G     E E 
Sbjct: 223 MVAPDDHVICALSGGVDSTVAATLVHKAIGDRLHCVFVDNGLLRYKERER 272


>gi|115451057|ref|NP_001049129.1| Os03g0174600 [Oryza sativa Japonica Group]
 gi|108706458|gb|ABF94253.1| tRNA methyl transferase family protein, expressed [Oryza sativa
           Japonica Group]
 gi|113547600|dbj|BAF11043.1| Os03g0174600 [Oryza sativa Japonica Group]
 gi|215737060|dbj|BAG95989.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 488

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 54/201 (26%), Gaps = 15/201 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS  L        R          +         C     ++      D
Sbjct: 79  RVAVLVSGGVDSSVALRLLHAAGHRCTAFYLKIWFQEDFRNFWSECPWDDDLKYAQAVCD 138

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +     +    L D   + +  ++  + +    PN  V     I           LG  
Sbjct: 139 KIDVPLEVV--HLSDEYWNHVVSHIINEYRSGRTPNPDVLCNTRIKFGAFLEAIENLGFD 196

Query: 130 NIVIGVCETDYSGYPDC----------RHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            I  G         PD           +           +L       +  PL  + K E
Sbjct: 197 YIASGHYAHVVHPSPDDVEGPSVLQLSKDKVKDQTYFLSHLSQTQLRRLLFPLGCITKDE 256

Query: 180 TWKLAQDIGGQDLVNLILEES 200
             +LA  +   DL N   ++S
Sbjct: 257 VRRLAAQM---DLPNQDRKDS 274


>gi|37680722|ref|NP_935331.1| cell cycle protein MesJ [Vibrio vulnificus YJ016]
 gi|61217308|sp|Q7MIH8|TILS_VIBVY RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
          Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
          Full=tRNA(Ile)-lysidine synthetase
 gi|37199471|dbj|BAC95302.1| cell cycle protein MesJ [Vibrio vulnificus YJ016]
          Length = 436

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 18/56 (32%), Gaps = 4/56 (7%)

Query: 6  KKAPSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVR 57
          K     ++ FSGG DS   L  A             +   +G  +  +   + C  
Sbjct: 17 KANTRLVVAFSGGVDSRVLLELAHRYAQEHLLPCCAVHVHHGLSHNADQWVQSCAA 72


>gi|27365224|ref|NP_760752.1| tRNA(Ile)-lysidine synthetase [Vibrio vulnificus CMCP6]
 gi|61217354|sp|Q8DBE4|TILS_VIBVU RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
          Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
          Full=tRNA(Ile)-lysidine synthetase
 gi|27361371|gb|AAO10279.1| tRNA(Ile)-lysidine synthetase [Vibrio vulnificus CMCP6]
          Length = 436

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 18/56 (32%), Gaps = 4/56 (7%)

Query: 6  KKAPSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVR 57
          K     ++ FSGG DS   L  A             +   +G  +  +   + C  
Sbjct: 17 KANTRLVVAFSGGVDSRVLLELAHRYAQEHLLPCCAVHVHHGLSHNADQWVQSCAA 72


>gi|258543332|ref|YP_003188765.1| GMP synthase [Acetobacter pasteurianus IFO 3283-01]
 gi|256634410|dbj|BAI00386.1| glutamine amidotransferase [Acetobacter pasteurianus IFO 3283-01]
 gi|256637468|dbj|BAI03437.1| glutamine amidotransferase [Acetobacter pasteurianus IFO 3283-03]
 gi|256640520|dbj|BAI06482.1| glutamine amidotransferase [Acetobacter pasteurianus IFO 3283-07]
 gi|256643577|dbj|BAI09532.1| glutamine amidotransferase [Acetobacter pasteurianus IFO 3283-22]
 gi|256646632|dbj|BAI12580.1| glutamine amidotransferase [Acetobacter pasteurianus IFO 3283-26]
 gi|256649685|dbj|BAI15626.1| glutamine amidotransferase [Acetobacter pasteurianus IFO 3283-32]
 gi|256652673|dbj|BAI18607.1| glutamine amidotransferase [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256655729|dbj|BAI21656.1| glutamine amidotransferase [Acetobacter pasteurianus IFO 3283-12]
          Length = 533

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 56/185 (30%), Gaps = 17/185 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS       +   D++  +  D+G     E          +++      
Sbjct: 237 KVICGLSGGVDSSVAAVLIHEAIGDQLTCIFVDHGMLRAGE-------ADDVIKTFRGQF 289

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +            L ++       +  +K +        V       L  A  LA     
Sbjct: 290 NIQLVHRDASDIFLKEL---DGVTDPEIKRKTIGRLFVEVFEEEATKLGGAQFLAQGT-- 344

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
               +     +   +      TI++      L    ++ +  PL  L K E   L +++G
Sbjct: 345 ----LYPDVIESVSFTGGPSVTIKSHHNVGGLPDRMNMKLVEPLRELFKDEVRDLGRELG 400

Query: 189 GQDLV 193
             +++
Sbjct: 401 IPEII 405


>gi|149194101|ref|ZP_01871199.1| hypothetical protein CMTB2_03413 [Caminibacter mediatlanticus TB-2]
 gi|149136054|gb|EDM24532.1| hypothetical protein CMTB2_03413 [Caminibacter mediatlanticus TB-2]
          Length = 323

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 58/190 (30%), Gaps = 12/190 (6%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV--ELECRLCVRKKIVELMPKWKD 69
           LL FSGG DSS    W +++    +    +Y  R     E+E    + KK      K   
Sbjct: 4   LLAFSGGIDSSALFFWLMEKNIDFDIAIVNYHTRETSDEEVEYAKYLAKKYN---KKIFI 60

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                         D  ++   + +        +    +  R   FL+  +  A   G+ 
Sbjct: 61  KDCYLKKFSEKKARDCRYTFFEEIIKKYGYSTLILGHQLNDRFEWFLMQLSKGA---GLK 117

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            ++      +   Y   R     +    I    + ++               K  +++  
Sbjct: 118 ELIAMEKWEEREFYKIYRPFYNLSRREIIEYLHKHNIKYFIDKSNFD----IKYKRNLIR 173

Query: 190 QDLVNLILEE 199
           ++  N  +E 
Sbjct: 174 KEFSNKFIEM 183


>gi|124262857|ref|YP_001023327.1| hypothetical protein Mpe_B0317 [Methylibium petroleiphilum PM1]
 gi|124262103|gb|ABM97092.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
          Length = 607

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 70/259 (27%), Gaps = 30/259 (11%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVET------LSFDYGQRNKVELECRLCVRKKIVELM 64
           A+  FSGG+DSS   +  L+             + F  G       E     R ++ ++ 
Sbjct: 39  AVCAFSGGKDSSVVAALLLNTAAEFAAEGGKPFVIFTTGDTLVENPEIVEHYRAELAKVR 98

Query: 65  PKWKDSLGEDHI-LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              K+     H  +           S+    A+        +  V  + +    +   L 
Sbjct: 99  QFCKERGIRVHTKIVSPTFASSFQLSILSGRALPSWAGTKGDCTVSYKIVPQRSYRRKLF 158

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRA---IETAINLGMESHVTVHTPLMWLKKYET 180
            +L   N+   V           R             + +  +    V  P+      + 
Sbjct: 159 RQLKDQNLPEAVTLLGTRFDESERRAMHMKARGDRADVPVRNKDDELVLCPVAMWSSEDI 218

Query: 181 WKL-AQDIGGQDLVNLILEESH---------TC---YLGKRDKRYEWGYGCNS---CPAC 224
           W+       G        EE+          +C        +       GC +   C  C
Sbjct: 219 WEYVGMVTSGVWTAFTDFEETMRIYSHAAGTSCAVVADAIHEGAKAKKGGCGARHGCYVC 278

Query: 225 YL----RQKGWMEFKEKYQ 239
                   +  +E  E+Y+
Sbjct: 279 LQAEDKSLEAMLEHDERYE 297


>gi|42571981|ref|NP_974081.1| GMP synthase (glutamine-hydrolyzing), putative / glutamine
           amidotransferase, putative [Arabidopsis thaliana]
 gi|332196007|gb|AEE34128.1| GMP-synthase-C and glutamine amidotransferase domain-containing
           protein [Arabidopsis thaliana]
          Length = 434

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 52/187 (27%), Gaps = 9/187 (4%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
           N  +      +   SGG DS+   +       DR+  +  D G     E E  +   ++ 
Sbjct: 221 NKTVASDEHVICALSGGVDSTVAATLVHKAIGDRLHCIFVDNGLLRYKEQERVMDTFER- 279

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                     L    +             +      KI      N F      +      
Sbjct: 280 -------DLHLPVTCVDASERFLSELKGVVDPETKRKIIGREFINIFDQFAQELEKKHGK 332

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
             A+ +  T     +      G       TI++      L  +  + +  PL  L K E 
Sbjct: 333 KPAFLVQGTLYPDVIESCPPPGTDRTHSHTIKSHHNVGGLPKDMKLKLIEPLKLLFKDEV 392

Query: 181 WKLAQDI 187
            +L + +
Sbjct: 393 RELGRIL 399


>gi|15222505|ref|NP_176553.1| GMP synthase (glutamine-hydrolyzing), putative / glutamine
           amidotransferase, putative [Arabidopsis thaliana]
 gi|12324937|gb|AAG52416.1|AC011622_4 GMP synthase; 61700-64653 [Arabidopsis thaliana]
 gi|56381989|gb|AAV85713.1| At1g63660 [Arabidopsis thaliana]
 gi|332196006|gb|AEE34127.1| GMP-synthase-C and glutamine amidotransferase domain-containing
           protein [Arabidopsis thaliana]
          Length = 534

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 52/187 (27%), Gaps = 9/187 (4%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
           N  +      +   SGG DS+   +       DR+  +  D G     E E  +   ++ 
Sbjct: 221 NKTVASDEHVICALSGGVDSTVAATLVHKAIGDRLHCIFVDNGLLRYKEQERVMDTFER- 279

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                     L    +             +      KI      N F      +      
Sbjct: 280 -------DLHLPVTCVDASERFLSELKGVVDPETKRKIIGREFINIFDQFAQELEKKHGK 332

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
             A+ +  T     +      G       TI++      L  +  + +  PL  L K E 
Sbjct: 333 KPAFLVQGTLYPDVIESCPPPGTDRTHSHTIKSHHNVGGLPKDMKLKLIEPLKLLFKDEV 392

Query: 181 WKLAQDI 187
            +L + +
Sbjct: 393 RELGRIL 399


>gi|53712261|ref|YP_098253.1| GMP synthase [Bacteroides fragilis YCH46]
 gi|60680438|ref|YP_210582.1| GMP synthase [Bacteroides fragilis NCTC 9343]
 gi|253563703|ref|ZP_04841160.1| glutaminne-hydrolyzing GMP synthase [Bacteroides sp. 3_2_5]
 gi|265762449|ref|ZP_06091017.1| GMP synthase domain-containing protein [Bacteroides sp. 2_1_16]
 gi|81316492|sp|Q5LGV6|GUAA_BACFN RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|81383393|sp|Q64XQ7|GUAA_BACFR RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|52215126|dbj|BAD47719.1| glutaminne-hydrolyzing GMP synthase [Bacteroides fragilis YCH46]
 gi|60491872|emb|CAH06630.1| putative GMP synthase [glutamine-hydrolyzing] [Bacteroides fragilis
           NCTC 9343]
 gi|251947479|gb|EES87761.1| glutaminne-hydrolyzing GMP synthase [Bacteroides sp. 3_2_5]
 gi|263255057|gb|EEZ26403.1| GMP synthase domain-containing protein [Bacteroides sp. 2_1_16]
 gi|301161971|emb|CBW21515.1| putative GMP synthase [glutamine-hydrolyzing] [Bacteroides fragilis
           638R]
          Length = 507

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 49/187 (26%), Gaps = 21/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D+G   K E +                
Sbjct: 214 DKVVLGLSGGVDSSVAAVLLNRAIGKNLTCIFVDHGMLRKNEFK---------------- 257

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                  H      L  I   +  K  +                     VF         
Sbjct: 258 ----NVMHDYECLGLNVIGVDASEKFFSELEGVTEPERKRKIIGKGFIDVFDEEAHKLKD 313

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G    D           I++      L  + ++ +  PL  L K E  ++ +++
Sbjct: 314 VKWLAQGTIYPDCIESLSITGTVIKSHHNVGGLPEKMNLKLCEPLRLLFKDEVRRVGREL 373

Query: 188 GGQDLVN 194
           G  + + 
Sbjct: 374 GMPEHLI 380


>gi|313887221|ref|ZP_07820916.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923312|gb|EFR34126.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Porphyromonas asaccharolytica PR426713P-I]
          Length = 376

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 23/176 (13%), Positives = 47/176 (26%), Gaps = 2/176 (1%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           LL SGG DSS  +   ++   R +      G +++          + I  +    +    
Sbjct: 17  LLASGGVDSSVAMHLLVEAGFRPDLYYIRIGMQDEDGGYLDCPAEEDIELVTLLARRYDL 76

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI--TN 130
              ++ L  L      + T +   +    N                    +Y        
Sbjct: 77  HLEVIDLHKLYWDRVVTYTMDAVKRGLTPNPDVMCNKLIKFGAFEERCGSSYDYIATGHY 136

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
             I       +             +    +G      +  P+  L K E  ++A +
Sbjct: 137 ATIRKTAEGLTFLGTSPDPVKDQTDFLAQIGFRQMERLLFPIGHLPKEEVRRIALE 192


>gi|313204026|ref|YP_004042683.1| gmp synthase (glutamine-hydrolyzing) [Paludibacter propionicigenes
           WB4]
 gi|312443342|gb|ADQ79698.1| GMP synthase (glutamine-hydrolyzing) [Paludibacter propionicigenes
           WB4]
          Length = 505

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 1/54 (1%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
              +L  SGG DSS             +  +  D+G   K E E  +   + + 
Sbjct: 212 DKVVLALSGGVDSSVAAVLLNKAIGKNLTCVFVDHGLLRKNEFENVMRDYEHLG 265


>gi|288940531|ref|YP_003442771.1| NAD+ synthetase [Allochromatium vinosum DSM 180]
 gi|288895903|gb|ADC61739.1| NAD+ synthetase [Allochromatium vinosum DSM 180]
          Length = 536

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 64/232 (27%), Gaps = 9/232 (3%)

Query: 11  ALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           A+L  SGG DS+  L+ A+D    DRVE +         +  E  L   +++        
Sbjct: 284 AVLGLSGGIDSALTLAIAVDALGADRVEAVLMPSRYTADMSNEDALEQARRLGVSTRVIP 343

Query: 69  DSLGEDHILP-LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                   L  L  +       +T+          +          I L         +G
Sbjct: 344 IEPAFHAFLDMLEPVFAGQPVDVTEENIQARCRGIILMAISNKSGRILLTTGNKSEMAVG 403

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   +           +    R               V       +          +
Sbjct: 404 YATLYGDMAGGFAPIKDVPKMLVYRLARYRNGRSPVIPERVIERAPSAELRPDQTDQDSL 463

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWMEFKEKYQ 239
              DL++ IL+     Y+   +   +        PA  +R+   +  + +Y+
Sbjct: 464 PPYDLLDAILKR----YIEDDESVEDIVAQ-GY-PADVVRRVARLVDRNEYK 509


>gi|210135204|ref|YP_002301643.1| GMP synthase [Helicobacter pylori P12]
 gi|226739630|sp|B6JMN5|GUAA_HELP2 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|210133172|gb|ACJ08163.1| gmp synthase [Helicobacter pylori P12]
          Length = 508

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 55/182 (30%), Gaps = 20/182 (10%)

Query: 10  SALLLFSGGQDSS---TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             L   SGG DS+   T L  A+   D +  +  D+G   K E E    + K +     +
Sbjct: 211 KVLCAVSGGVDSTVVATLLYRAIK--DNLIAVFVDHGLLRKNEKERVQAMFKDL-----Q 263

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +  +   + L+ L  +S   L + +            F        L        ++
Sbjct: 264 IPLNTIDAKGIFLSKLKGVSEPELKRKII----GETFIEVFEKEAKKHHLKG------KI 313

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                     +   S         I+       L       +  PL  L K E   L ++
Sbjct: 314 EFLAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEARLLGKE 373

Query: 187 IG 188
           +G
Sbjct: 374 LG 375


>gi|150399906|ref|YP_001323673.1| hypothetical protein Mevan_1163 [Methanococcus vannielii SB]
 gi|150012609|gb|ABR55061.1| ExsB family protein [Methanococcus vannielii SB]
          Length = 200

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 19/34 (55%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
           A +LFSGG+DSS       +    ++ ++ ++G
Sbjct: 5  KAHVLFSGGKDSSLSAIILHNLGYEIQLITVNFG 38


>gi|15668605|ref|NP_247403.1| argininosuccinate synthase [Methanocaldococcus jannaschii DSM 2661]
 gi|2492988|sp|Q60174|ASSY_METJA RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|1591132|gb|AAB98414.1| argininosuccinate synthetase (argG) [Methanocaldococcus jannaschii
           DSM 2661]
          Length = 395

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 49/185 (26%), Gaps = 22/185 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               A+L +SGG D+S CL         +V ++  D GQ  +   E              
Sbjct: 1   MERIAVLAYSGGLDTSCCLKLLEDKYGYKVVSVCVDVGQPEEEIKE----------VEEK 50

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             K  + + + +      +                             +       +A  
Sbjct: 51  AKKLGVLKHYTID---AKEEFVKDYIFRAIKANAMYEGYPLSTALARPLIAHKVVEIAEE 107

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G   +  G        +       I+A    I   +          + L + E  + A+
Sbjct: 108 VGAEAVAHGCTGKGNDQFRFETTIRIKAPHLKIIAPIRD--------LNLTRAEEIEYAK 159

Query: 186 DIGGQ 190
           + G  
Sbjct: 160 EKGIP 164


>gi|116754741|ref|YP_843859.1| argininosuccinate synthase [Methanosaeta thermophila PT]
 gi|116666192|gb|ABK15219.1| argininosuccinate synthase [Methanosaeta thermophila PT]
          Length = 394

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 59/207 (28%), Gaps = 12/207 (5%)

Query: 7   KAPSA-LLL-FSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
               A + L +SGG D+S C+    +R+   RV T+  D GQ  + ++E      +K+ +
Sbjct: 1   MTDKAEVALAYSGGLDTSVCIPLLRERYGMKRVVTVLVDVGQPPE-DIERGNRRAEKLSD 59

Query: 63  LMPKW--KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                  KD    D+I PL          +      +               I  L    
Sbjct: 60  EHYIIDAKDEFVRDYIFPLIKANGSYEGYVLGTAIARPLIARKVVDVARKLGINALAHGC 119

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           T      +    +          P    D  R  E          V V     W      
Sbjct: 120 TGRGNDQLRFEAVFRATGMRVIAPMRDLDLSREWEIDYAREHGIDVQVSKKRPWSIDENL 179

Query: 181 WKLAQDIGG-----QDLVNLILEESHT 202
           W  + + G       +    I   + T
Sbjct: 180 WSRSIEGGMLEDPFFEPPEEIYAWTRT 206


>gi|323961057|gb|EGB56672.1| argininosuccinate synthase [Escherichia coli H489]
          Length = 447

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDEIPRRAMEYGAENARLID 72


>gi|300905602|ref|ZP_07123351.1| conserved domain protein [Escherichia coli MS 84-1]
 gi|300402554|gb|EFJ86092.1| conserved domain protein [Escherichia coli MS 84-1]
          Length = 148

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 17/38 (44%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
           ++++      LLFSGG DS+       +  ++     F
Sbjct: 109 EMMRDNRKIALLFSGGLDSALIFHTLKESGNKFCAYHF 146


>gi|262366889|gb|ACY63446.1| thiamine biosynthesis protein [Yersinia pestis D182038]
          Length = 243

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 23/72 (31%), Gaps = 9/72 (12%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  RV    F+ G            +   + ++     + 
Sbjct: 162 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG-------SAHEI--GVKQVAHYLWNR 212

Query: 71  LGEDHILPLAIL 82
            G  H +    +
Sbjct: 213 FGSSHRVRFIAI 224


>gi|229015466|ref|ZP_04172466.1| tRNA(Ile)-lysidine synthase [Bacillus cereus AH1273]
 gi|228745824|gb|EEL95826.1| tRNA(Ile)-lysidine synthase [Bacillus cereus AH1273]
          Length = 480

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 24/197 (12%), Positives = 54/197 (27%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D++KK  + ++  SGG DS   L + L++                          + +V 
Sbjct: 21  DVLKKHSTIVVGVSGGPDSLALLYYLLEK--------------------RAEKQLEIVVA 60

Query: 63  LMPKW--KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +      +   ED      I  ++     T  + +                     F  
Sbjct: 61  HVDHMFRGNESHEDLQFVQGICKELGVICETIRINVSQYQQQYGMNAQVAARECRYAFLE 120

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKK 177
           T+  +     + +G    D       R       +    + ++       +  PL+ + K
Sbjct: 121 TIMKKYDARYVALGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGYLIRPLLGVTK 180

Query: 178 YETWKLAQDIGGQDLVN 194
            E       +     ++
Sbjct: 181 EEIVDYCNKLKVIPRID 197


>gi|229113738|ref|ZP_04243174.1| tRNA(Ile)-lysidine synthase [Bacillus cereus Rock1-3]
 gi|228669735|gb|EEL25141.1| tRNA(Ile)-lysidine synthase [Bacillus cereus Rock1-3]
          Length = 283

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 23/197 (11%), Positives = 54/197 (27%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D++K+  + ++  SGG DS   L + L++                          + +V 
Sbjct: 21  DVLKECSTIVVGVSGGPDSLALLYYLLEK--------------------RAEKQLEIVVA 60

Query: 63  LMPKW--KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +      D   ED      +   +  +  T  V +                     F  
Sbjct: 61  HVDHMFRGDESHEDLQFVQDLCKGLGVTCETIRVNVSQYQQQYGMNAQVAARECRYAFLE 120

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKK 177
            +  +     + +G    D       R       +    + ++       +  PL+ + K
Sbjct: 121 RIMKKYDARYVALGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGYLIRPLLGVTK 180

Query: 178 YETWKLAQDIGGQDLVN 194
            E      ++     ++
Sbjct: 181 EEIVNYCNELNLIPRID 197


>gi|224055025|ref|XP_002298404.1| predicted protein [Populus trichocarpa]
 gi|222845662|gb|EEE83209.1| predicted protein [Populus trichocarpa]
          Length = 434

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 30/139 (21%), Gaps = 1/139 (0%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M D  K    A+ L SGG DSS  L                   +         C  ++ 
Sbjct: 1   MADKDKPLRIAV-LLSGGVDSSVALRLLHAAGHHCTAFYLKIWFQEDFNNFWSECPWEED 59

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           ++      D +G    +        S+         +      P+     R        A
Sbjct: 60  LKFAKGVCDQVGVPLEVVHLTDEYWSNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDA 119

Query: 121 TLAYRLGITNIVIGVCETD 139
                              
Sbjct: 120 INNMEFDYVASGHYAHVIH 138


>gi|170747043|ref|YP_001753303.1| argininosuccinate synthase [Methylobacterium radiotolerans JCM
          2831]
 gi|170653565|gb|ACB22620.1| Argininosuccinate synthase [Methylobacterium radiotolerans JCM
          2831]
          Length = 412

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 3/57 (5%)

Query: 6  KKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
                +L +SGG D+S  L W        V T + D GQ  ++E        + + 
Sbjct: 7  SPVKKVVLAYSGGLDTSIILKWLQTTYGCEVVTFTADLGQGEELEP--ARRKAELLG 61


>gi|71066186|ref|YP_264913.1| argininosuccinate synthase [Psychrobacter arcticus 273-4]
 gi|119361311|sp|Q4FR79|ASSY_PSYA2 RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|71039171|gb|AAZ19479.1| argininosuccinate synthase [Psychrobacter arcticus 273-4]
          Length = 412

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 45/158 (28%), Gaps = 9/158 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K     +L +SGG D+S    W  + +D  V T + D GQ  +VE          I  + 
Sbjct: 7   KTINKIVLAYSGGLDTSIIARWLQETYDAEVITFTADIGQGEEVEPARAKAEAMGIKHIH 66

Query: 65  -PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
               ++    D++ P+     I         ++           +  R +         A
Sbjct: 67  IEDLREEFARDYVFPMFRANAIYEGEYLLGTSIARP-------LIAKRLVEIAKEHNADA 119

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
              G T         +             A     +L 
Sbjct: 120 ISHGATGKGNDQVRFELGAVALSPDVVTIAPWREWDLS 157


>gi|332981044|ref|YP_004462485.1| NAD+ synthetase [Mahella australiensis 50-1 BON]
 gi|332698722|gb|AEE95663.1| NAD+ synthetase [Mahella australiensis 50-1 BON]
          Length = 548

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/146 (12%), Positives = 35/146 (23%), Gaps = 2/146 (1%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              ++  SGG DS+   + A+D      V  LS      +    +    + K +      
Sbjct: 290 KKTVVALSGGIDSAVVCALAVDALGKRNVLGLSMPSRYSSTGSRDDAYVLAKNLDIEFRT 349

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +      +  L            L +         N         N + L         +
Sbjct: 350 YPIEDVFEACLRTFNGDSPPKGDLAEENIQARIRGNFIMFIANRENRMALTTGNKSELAV 409

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIR 152
           G   +   +C          +     
Sbjct: 410 GYCTLYGDMCGALAPISDVPKTMVYE 435


>gi|329765674|ref|ZP_08257244.1| argininosuccinate synthase [Candidatus Nitrosoarchaeum limnia
          SFB1]
 gi|329137842|gb|EGG42108.1| argininosuccinate synthase [Candidatus Nitrosoarchaeum limnia
          SFB1]
          Length = 399

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 3/60 (5%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               +L FSGG D+S  + +  + +D  V T++ D GQ    +        KK+     
Sbjct: 1  MTEKGILAFSGGLDTSVVVKYLQEEYDMDVITVTVDVGQ--GDDQRKIEAKAKKLGVKKH 58


>gi|254499274|ref|ZP_05111950.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Legionella drancourtii LLAP12]
 gi|254351518|gb|EET10377.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Legionella drancourtii LLAP12]
          Length = 525

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 48/185 (25%), Gaps = 16/185 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS   +       D++  +  D G    + L     V K   + M  
Sbjct: 226 TEKVLLGLSGGVDSSVVAALLHKAIGDQLICVFVDTG---LLRLNEADDVMKMFGQHMGI 282

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              ++  +     A+ G        K +     +                          
Sbjct: 283 NIIAVNAEEKFLGALKGITCPEEKRKIIGHTFIEVFDEEAHKITGISWL----------- 331

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                +        +   +     I++      L     + +  P+  L K E   +  +
Sbjct: 332 -AQGTIYPDVIESAATNINGASVVIKSHHNVGGLPETLKLKLLEPVRELFKDEVRSIGLE 390

Query: 187 IGGQD 191
           +G   
Sbjct: 391 LGLPH 395


>gi|281420944|ref|ZP_06251943.1| argininosuccinate synthase [Prevotella copri DSM 18205]
 gi|281404862|gb|EFB35542.1| argininosuccinate synthase [Prevotella copri DSM 18205]
          Length = 400

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 53/195 (27%), Gaps = 13/195 (6%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++ FSGG D+S  +         V     + G  +  +L+       K+       
Sbjct: 3   NKKVVVAFSGGLDTSYTVMKLTQDGWDVYAACANTGGFSSEQLKTNEENAYKLGAKAYVT 62

Query: 68  KDSLGE--DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            D   E  +  L   I G++  ++      + +    +       R    +   A     
Sbjct: 63  LDVTHEYYEKSLKYMIFGNVLRNNC---YPISVSSERIFQAIAIARYAKEIGADAIAHGS 119

Query: 126 LGI------TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            G        ++   V           R   +   E    L         T L +     
Sbjct: 120 TGAGNDQIRFDMTFLVMAPGVEIITLTRDKALSRKEEVDYLNEHGFFADFTKLKYSYNVG 179

Query: 180 TWKLAQDIGGQDLVN 194
            W     I G ++++
Sbjct: 180 IW--GTSICGGEILD 192


>gi|111018263|ref|YP_701235.1| sulfate adenylyltransferase subunit 2 [Rhodococcus jostii RHA1]
 gi|110817793|gb|ABG93077.1| sulfate adenylyltransferase small subunit [Rhodococcus jostii RHA1]
          Length = 317

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 50/180 (27%), Gaps = 17/180 (9%)

Query: 12  LLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++LFSGG+DS+  L  A+  F         L  D G   +  L+ R  V  K    +   
Sbjct: 48  VILFSGGKDSTVLLHLAIKAFWPAPLPFALLHVDTGHNLQEVLDFRDHVVSKYNLRLHVA 107

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           K             L D   +     +   +Q   L +     R       A     R  
Sbjct: 108 K---------VEDYLADGRLTERPDGIRNPLQTVPLLDAIAENRFDAVFGGARRDEERAR 158

Query: 128 ITN-IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I               R +         + G +  V    PL    + + W+    
Sbjct: 159 AKERIFSLRNSFGQWDPKKQRPELWNLYNGKHSPGEQVRV---FPLSNFTELDIWRYIAR 215


>gi|78776387|ref|YP_392702.1| asparagine synthase, glutamine-hydrolyzing [Sulfurimonas
           denitrificans DSM 1251]
 gi|78496927|gb|ABB43467.1| asparagine synthase (glutamine-hydrolysing) [Sulfurimonas
           denitrificans DSM 1251]
          Length = 583

 Score = 44.5 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%)

Query: 14  LFSGGQDSS-TCLSWALDRFDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKWKDSL 71
           L SGG DSS     +A     +V T S  Y   ++  EL       + I  +  ++K S 
Sbjct: 250 LLSGGLDSSFITALYAKKSKHKVHTFSIGYDEHKHYCELGFAKAASEYIGTIHHEYKISK 309

Query: 72  GE 73
            E
Sbjct: 310 DE 311


>gi|325920175|ref|ZP_08182135.1| argininosuccinate synthase [Xanthomonas gardneri ATCC 19865]
 gi|325549355|gb|EGD20249.1| argininosuccinate synthase [Xanthomonas gardneri ATCC 19865]
          Length = 413

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 23/59 (38%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +L FSGG D+S C+ +   +   V T+  D G  +  E +       ++      
Sbjct: 19 KKDIVLAFSGGLDTSFCIPYLQAQGYAVHTVFADTGGVDAEERDFIEKRAAELGAASHV 77


>gi|319442945|ref|ZP_07992101.1| GMP synthase [Corynebacterium variabile DSM 44702]
          Length = 512

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 61/193 (31%), Gaps = 12/193 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
            + +     A+   SGG DS+   +       DR+  +  D+G   K E E         
Sbjct: 202 REQVGPEGRAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRKGEREQVET----- 256

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            + +      L        A L  ++  S  +     I    + +       ++      
Sbjct: 257 -DFVAATGAKLVTVDE-REAFLSKLAGVSDPEAKRKAIGAEFIRSFERAVAGVLGDAPEG 314

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           +    L    +   V E+            I++      L  +   T+  PL  L K E 
Sbjct: 315 STVDFLVQGTLYPDVVESGGGSGT----ANIKSHHNVGGLPDDVEFTLVEPLRLLFKDEV 370

Query: 181 WKLAQDIGGQDLV 193
             + +++G  +++
Sbjct: 371 RAVGRELGLPEVI 383


>gi|317969133|ref|ZP_07970523.1| tRNA-specific 2-thiouridylase MnmA [Synechococcus sp. CB0205]
          Length = 397

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 18/143 (12%), Positives = 35/143 (24%), Gaps = 10/143 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +  SGG DSS   +  ++    VE L+        +      C  + +V+     + 
Sbjct: 36  RVAVGLSGGVDSSLTAALLVEAGWEVEGLTL------WLMSGKGACCAEGLVDAAGVCEQ 89

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA-YRLGI 128
                H++      +     +   +    +    P         +        A     I
Sbjct: 90  LEVPHHVVD---FREHFKEQIVDFLVQGYEAGVTPLPCSRCNREVKFGPMLRWAKEERKI 146

Query: 129 TNIVIGVCETDYSGYPDCRHDTI 151
             I  G       G         
Sbjct: 147 DRIATGHYARVRHGDQSENGRHQ 169


>gi|295399520|ref|ZP_06809502.1| argininosuccinate synthase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294978986|gb|EFG54582.1| argininosuccinate synthase [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 402

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 26/213 (12%), Positives = 52/213 (24%), Gaps = 29/213 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            P  +L +SGG D+S  + W  +R   V     D G     +L+       K+       
Sbjct: 3   NPKIVLAYSGGLDTSVAIKWLQERGYDVIACCLDLG--EGKDLDFVKEKALKVGA----- 55

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-LAYRL 126
                + +++ +    +   +                   V   +   +      +A   
Sbjct: 56  ----IKSYVIDV---KEEFANEYALIALQAHALYEGKYPLVSALSRPLISKKLVEIAELE 108

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   +  G                     +   L     V          + E  + A+ 
Sbjct: 109 GAVAVAHGCTGKGNDQVRFE--------VSIKALNPHLEVVAPVREWSWSREEEIEYAKK 160

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCN 219
            G    V++    S           +     C 
Sbjct: 161 HGIPIPVDIDSPFS------IDKNLWGRSNECG 187


>gi|293604399|ref|ZP_06686806.1| argininosuccinate synthase [Achromobacter piechaudii ATCC 43553]
 gi|292817276|gb|EFF76350.1| argininosuccinate synthase [Achromobacter piechaudii ATCC 43553]
          Length = 446

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W  +        + + GQ ++ + +              +  D
Sbjct: 16 IAFSGGLDTSAALLWMRNNGAIPYAYTANLGQPDESDYDEIPRKALAYGAENARLID 72


>gi|283853918|ref|ZP_06371128.1| thiamine biosynthesis protein [Desulfovibrio sp. FW1012B]
 gi|283570695|gb|EFC18745.1| thiamine biosynthesis protein [Desulfovibrio sp. FW1012B]
          Length = 353

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 13/30 (43%)

Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
          AL LFSGG DS         +   V  L F
Sbjct: 6  ALALFSGGLDSILAAKTVAAQGLDVLCLHF 35


>gi|312109922|ref|YP_003988238.1| argininosuccinate synthase [Geobacillus sp. Y4.1MC1]
 gi|311215023|gb|ADP73627.1| argininosuccinate synthase [Geobacillus sp. Y4.1MC1]
          Length = 402

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 26/213 (12%), Positives = 52/213 (24%), Gaps = 29/213 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            P  +L +SGG D+S  + W  +R   V     D G     +L+       K+       
Sbjct: 3   NPKIVLAYSGGLDTSVAIKWLQERGYDVIACCLDLG--EGKDLDFVKEKALKVGA----- 55

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-LAYRL 126
                + +++ +    +   +                   V   +   +      +A   
Sbjct: 56  ----IKSYVIDV---KEEFANEYALIALQAHALYEGKYPLVSALSRPLISKKLVEIAELE 108

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   +  G                     +   L     V          + E  + A+ 
Sbjct: 109 GAVAVAHGCTGKGNDQVRFE--------VSIKALNPHLEVVAPVREWSWSREEEIEYAKK 160

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCN 219
            G    V++    S           +     C 
Sbjct: 161 HGIPIPVDIDSPFS------IDKNLWGRSNECG 187


>gi|225567860|ref|ZP_03776885.1| hypothetical protein CLOHYLEM_03933 [Clostridium hylemonae DSM
           15053]
 gi|225163338|gb|EEG75957.1| hypothetical protein CLOHYLEM_03933 [Clostridium hylemonae DSM
           15053]
          Length = 406

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 57/212 (26%), Gaps = 23/212 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L +SGG D++  + W  + F   V     D GQ  +++         K+     
Sbjct: 1   MKEKVVLAYSGGLDTTAIIPWLKENFDYEVICCCVDCGQGEELDGLEERA---KLSGASK 57

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            + + + +D             + +   V       N                   +A +
Sbjct: 58  LYIEDIVDD----------FCDNYVVPCVQAHAVYENKYLLGTSMARPAIAKKLVEIARK 107

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G T I  G                  A +  I                  + +  +  +
Sbjct: 108 EGATAICHGATGKGNDQIRFELGIKALAPDIKIIAPWRMTD----VWTMDSREDEIEYCR 163

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
             G    ++L  + S + Y   R+  +    G
Sbjct: 164 QHG----IDLPFDASQS-YSRDRNLWHISHEG 190


>gi|220928417|ref|YP_002505326.1| hypothetical protein Ccel_0984 [Clostridium cellulolyticum H10]
 gi|219998745|gb|ACL75346.1| hypothetical protein Ccel_0984 [Clostridium cellulolyticum H10]
          Length = 329

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 46/133 (34%), Gaps = 13/133 (9%)

Query: 13  LLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +LFSGG+DS+   +     +  RV TL+ D G  ++V L+    V  KI           
Sbjct: 35  VLFSGGKDSTYLANIMKQMKGGRVCTLTVDNGFEDEVFLDHVKKVADKIGVDSYIITPPK 94

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
            +  +L   ++ +    ++  N                      +      A    I  +
Sbjct: 95  EDFELLFNYVIKEPKLRAVDSNA------------ICYFCGQYIMKAGIRFAEENNIPVV 142

Query: 132 VIGVCETDYSGYP 144
           + G+  T Y+   
Sbjct: 143 IHGMSPTQYNLPD 155


>gi|320162464|ref|YP_004175689.1| hypothetical protein ANT_30630 [Anaerolinea thermophila UNI-1]
 gi|319996318|dbj|BAJ65089.1| hypothetical protein ANT_30630 [Anaerolinea thermophila UNI-1]
          Length = 271

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 58/190 (30%), Gaps = 33/190 (17%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +I+ +  SA++ FSGG DS+   + A     RV       G+R          + +   E
Sbjct: 11  EILAELDSAIVAFSGGVDSTLVAAAA----YRVL------GERAVAITAVSESLAESERE 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                   +G  H+L  +           +    + + N+    +     +  L   A  
Sbjct: 61  ETLALARHIGIRHVLIHS----------HELQDERYRANSPMRCYWCKNELGAL--LAAY 108

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A +   + I+ G    D       R     A                     + K +  +
Sbjct: 109 ARQHHYSAILDGSNLDDLGDVRPGRKAMQEA-----------GFRSPLIEAGMTKADVRE 157

Query: 183 LAQDIGGQDL 192
            A+ +G  + 
Sbjct: 158 AARLLGLPNW 167


>gi|329942917|ref|ZP_08291696.1| guaA GMP synthetase [Chlamydophila psittaci Cal10]
 gi|332287509|ref|YP_004422410.1| GMP synthase [Chlamydophila psittaci 6BC]
 gi|313848086|emb|CBY17085.1| GMP synthase [Chlamydophila psittaci RD1]
 gi|325506895|gb|ADZ18533.1| GMP synthase [Chlamydophila psittaci 6BC]
 gi|328815177|gb|EGF85166.1| guaA GMP synthetase [Chlamydophila psittaci Cal10]
 gi|328914757|gb|AEB55590.1| GMP synthase [Chlamydophila psittaci 6BC]
          Length = 512

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 57/186 (30%), Gaps = 20/186 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +    LL  SGG DSS           DR+  +  D G            +RK   + + 
Sbjct: 216 ETERVLLALSGGVDSSVLAVLLHRALGDRLSCVFVDTG-----------LLRKGEAQEVK 264

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +   SLG + I+  A        S   +  +K +        V       L         
Sbjct: 265 QLFASLGLEVIVEDASEKFFRDLSGVYDPELKRKVIGAAFVDVFDNISRDLNVQWLAQGT 324

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +    I         S         I++      L  + ++ +  PL +L K E   L +
Sbjct: 325 IYSDVI--------ESAKSCDATQVIKSHHNVGGLPEKLNLKLLEPLRFLFKDEIRALGK 376

Query: 186 DIGGQD 191
            +G  +
Sbjct: 377 TLGLPE 382


>gi|300703184|ref|YP_003744786.1| argininosuccinate synthase [Ralstonia solanacearum CFBP2957]
 gi|299070847|emb|CBJ42148.1| Argininosuccinate synthase (Citrulline--aspartate ligase)
          [Ralstonia solanacearum CFBP2957]
          Length = 445

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 23/57 (40%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W  ++       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALRWMKNKGALPYAYTANLGQPDEEDYDAIPRKAMEYGAEKARLID 72


>gi|254788130|ref|YP_003075559.1| asparagine synthase family protein [Teredinibacter turnerae T7901]
 gi|237683896|gb|ACR11160.1| asparagine synthase family protein [Teredinibacter turnerae T7901]
          Length = 432

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 19/49 (38%), Gaps = 2/49 (4%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           +  SGG DSST   +A         ++ D G     + E    +  ++ 
Sbjct: 166 VALSGGLDSSTMAHYAKRFCANPIAVTLDLGG--SEDAEKAQKIAAQLA 212


>gi|207744172|ref|YP_002260564.1| argininosuccinate synthase partial sequence n terminus) protein
          [Ralstonia solanacearum IPO1609]
 gi|206595576|emb|CAQ62503.1| putative argininosuccinate synthase partial sequence n terminus)
          protein [Ralstonia solanacearum IPO1609]
          Length = 255

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 23/57 (40%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W  ++       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALRWMKNKGALPYAYTANLGQPDEEDYDAIPRKAMEYGAEKARLID 72


>gi|207721725|ref|YP_002252164.1| argininosuccinate synthase [Ralstonia solanacearum MolK2]
 gi|206586888|emb|CAQ17473.1| argininosuccinate synthase partial sequence n terminus) protein
          [Ralstonia solanacearum MolK2]
          Length = 264

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 23/57 (40%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W  ++       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALRWMKNKGALPYAYTANLGQPDEEDYDAIPRKAMEYGAEKARLID 72


>gi|241664007|ref|YP_002982367.1| argininosuccinate synthase [Ralstonia pickettii 12D]
 gi|240866034|gb|ACS63695.1| argininosuccinate synthase [Ralstonia pickettii 12D]
          Length = 445

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 23/57 (40%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W  ++       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALRWMKNKGALPYAYTANLGQPDEEDYDAIPRKAMEYGAEKARLID 72


>gi|123969022|ref|YP_001009880.1| tRNA-specific 2-thiouridylase MnmA [Prochlorococcus marinus str.
           AS9601]
 gi|205816921|sp|A2BSL2|MNMA_PROMS RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|123199132|gb|ABM70773.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prochlorococcus marinus str. AS9601]
          Length = 385

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 54/192 (28%), Gaps = 21/192 (10%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++  SGG DSS   +  ++R   VE L+        +      C  + +V+     +D  
Sbjct: 27  IVGLSGGVDSSLSAALLVERGWNVEGLTL------WLMKGQGSCCSEGLVDAAGLCEDLG 80

Query: 72  GEDHILPLAIL---------------GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
               I+    +               G         N  +K ++             I  
Sbjct: 81  INHKIIDSREIFEREVIKKTTESYEKGFTPLPCSMCNKNVKFEEMLNYAISKKDFTHIAT 140

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
              A +      T +                 +         +L  E    +  PL  +K
Sbjct: 141 GHYARINKSSYATTLDCKNLVFKEFLLLRGADENKDQSYFLYSLSQEVLSRLEFPLGEMK 200

Query: 177 KYETWKLAQDIG 188
           K +T + A  +G
Sbjct: 201 KEDTRREALRLG 212


>gi|187929897|ref|YP_001900384.1| argininosuccinate synthase [Ralstonia pickettii 12J]
 gi|309781401|ref|ZP_07676137.1| argininosuccinate synthase [Ralstonia sp. 5_7_47FAA]
 gi|226729199|sp|B2UBA3|ASSY_RALPJ RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|187726787|gb|ACD27952.1| Argininosuccinate synthase [Ralstonia pickettii 12J]
 gi|308919814|gb|EFP65475.1| argininosuccinate synthase [Ralstonia sp. 5_7_47FAA]
          Length = 445

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 23/57 (40%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W  ++       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALRWMKNKGALPYAYTANLGQPDEEDYDAIPRKAMEYGAEKARLID 72


>gi|145594437|ref|YP_001158734.1| argininosuccinate synthase [Salinispora tropica CNB-440]
 gi|145303774|gb|ABP54356.1| argininosuccinate synthase [Salinispora tropica CNB-440]
          Length = 402

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 19/53 (35%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
               +L +SGG D+S  +   A      V  ++ D GQ  +     R     
Sbjct: 1  MTERVVLAYSGGLDTSVAIPYLAEQTGAEVIAVAVDVGQGGEDLEAIRQRALD 53


>gi|83748945|ref|ZP_00945954.1| Argininosuccinate synthase argG [Ralstonia solanacearum UW551]
 gi|83724368|gb|EAP71537.1| Argininosuccinate synthase argG [Ralstonia solanacearum UW551]
          Length = 445

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 23/57 (40%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W  ++       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALRWMKNKGALPYAYTANLGQPDEEDYDAIPRKAMEYGAEKARLID 72


>gi|219666859|ref|YP_002457294.1| argininosuccinate synthase [Desulfitobacterium hafniense DCB-2]
 gi|259585354|sp|B8FWX2|ASSY_DESHD RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|219537119|gb|ACL18858.1| Argininosuccinate synthase [Desulfitobacterium hafniense DCB-2]
          Length = 401

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 20/169 (11%), Positives = 48/169 (28%), Gaps = 7/169 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L +SGG D+S  + W  +     V  ++ D GQ  ++E      ++         +
Sbjct: 2   KKVVLAYSGGLDTSIIIPWLKENYGYEVIAMAADLGQGEELEPLHEKAIK---SGASKLY 58

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            + L E+ +         +  +        +   +     +  R +        +A   G
Sbjct: 59  IEDLQEEFVTDFIY---PTLKAGAVYEGKYLLGTSFARPLIAQRLVEIAAKEGAVAIAHG 115

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
            T         + +         I A     ++        +     + 
Sbjct: 116 ATGKGNDQVRFELAVKALNPDLEIIAPWRIWDIKSREDAIDYAVERGIP 164


>gi|306835323|ref|ZP_07468349.1| GMP synthase [Corynebacterium accolens ATCC 49726]
 gi|304568802|gb|EFM44341.1| GMP synthase [Corynebacterium accolens ATCC 49726]
          Length = 524

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 54/185 (29%), Gaps = 12/185 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+   +       DR+  +  D+G     E E          ++   + 
Sbjct: 222 RAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGERE----------QVETDFV 271

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            S G   +        +   +   +   K +           R  +  V A   A     
Sbjct: 272 ASTGAKLVTADERSAFLKKLAGVSDPEEKRKAIGAEFIRSFERA-VAGVLADAPAGSTVD 330

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +    +  PL  L K E   + +++G
Sbjct: 331 YLVQGTLYPDVVESGGGDGTANIKSHHNVGGLPDDVEFELVEPLRLLFKDEVRAVGRELG 390

Query: 189 GQDLV 193
             + +
Sbjct: 391 LPEEI 395


>gi|297852856|ref|XP_002894309.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Arabidopsis lyrata subsp. lyrata]
 gi|297340151|gb|EFH70568.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Arabidopsis lyrata subsp. lyrata]
          Length = 500

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 23/204 (11%), Positives = 51/204 (25%), Gaps = 9/204 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +K     +L SGG DSS  L                   +   E     C  +  ++ 
Sbjct: 80  MPEKPLRVAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEGFENFWNQCPWEDDLKY 139

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-- 121
                + +     +                   +      P+     R        A   
Sbjct: 140 AKHVCEQVDVPLEVVHLTDEYWERVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAISD 199

Query: 122 -----LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
                +        +   V + D S   +   D ++     ++   ++ +      +   
Sbjct: 200 MEYDYVGSGHYAKVVHPPVDQNDASSVLELSQDMVKDQTYFLSHLSQTQLKRLIFPLGCV 259

Query: 177 KYETWKLAQDIGGQDLVNLILEES 200
           K +  +        DL N   ++S
Sbjct: 260 KKDEVRKLAT--QFDLPNKDRKDS 281


>gi|92118967|ref|YP_578696.1| tRNA(Ile)-lysidine synthetase-like [Nitrobacter hamburgensis X14]
 gi|91801861|gb|ABE64236.1| tRNA(Ile)-lysidine synthetase-like protein [Nitrobacter
          hamburgensis X14]
          Length = 345

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 26/80 (32%), Gaps = 15/80 (18%)

Query: 11 ALLL-FSGGQDSSTCLSWALD------RFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
          AL+L  SGG DS+  +  A        R   +  ++ D+G R            ++  ++
Sbjct: 26 ALVLGVSGGPDSTALMWLAARWRRAMTRGPDLIAVTVDHGLRPGS--------AREARDV 77

Query: 64 MPKWKDSLGEDHILPLAILG 83
                       +  +   
Sbjct: 78 KHLATSLGMRHRTVRWSGAK 97


>gi|88855841|ref|ZP_01130504.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [marine actinobacterium PHSC20C1]
 gi|88815165|gb|EAR25024.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [marine actinobacterium PHSC20C1]
          Length = 533

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 54/185 (29%), Gaps = 11/185 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +       D++  +  D+G   + E            ++   + 
Sbjct: 230 RVICGLSGGVDSAVAAAIVHKAVGDQLVCIFVDHGLLRQDERR----------QVEEDYV 279

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            S G   +   A+   +   +   +   K +                LV     +     
Sbjct: 280 ASTGVRLVTVDAVDQFMDALAGVTDPETKRKIIGREFIRSFENAAEALVLETQGSDETVK 339

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +    +  PL  L K E   + +++G
Sbjct: 340 FLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPEDLQFDLVEPLRTLFKDEVRAIGRELG 399

Query: 189 GQDLV 193
             +++
Sbjct: 400 LPEVI 404


>gi|158425329|ref|YP_001526621.1| GMP synthase [Azorhizobium caulinodans ORS 571]
 gi|158332218|dbj|BAF89703.1| putative GMP synthase [Azorhizobium caulinodans ORS 571]
          Length = 515

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 58/188 (30%), Gaps = 25/188 (13%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DS+       +   D++  +  D+G     E        +++V L    
Sbjct: 218 KRVLCGLSGGVDSAVAAVLIHEAIGDQLTCVFVDHGLMRLGE-------AEQVVSLFRNT 270

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +            L ++   S  +     I               +F+      A ++G
Sbjct: 271 YNIPLVHVDASELFLKELDGVSDPEKKRKTI-------------GKLFIDVFEAEAKKIG 317

Query: 128 ITNIVI----GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             + +          +   +      TI++      L    ++ +  PL  L K E   L
Sbjct: 318 GADFLAQGTLYPDVIESVSFTGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRAL 377

Query: 184 AQDIGGQD 191
            +++G  +
Sbjct: 378 GRELGLPE 385


>gi|114797176|ref|YP_760512.1| GMP synthase [Hyphomonas neptunium ATCC 15444]
 gi|114737350|gb|ABI75475.1| GMP synthase [Hyphomonas neptunium ATCC 15444]
          Length = 526

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 52/185 (28%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS       +   D++  +  D+G     E E              +
Sbjct: 228 KGRVICGLSGGVDSSVAAVLIHEAIGDQLTCVYVDHGLMRAGESE--------------Q 273

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 E + +PL  +          +     +        +              A  L
Sbjct: 274 VVSLFREHYNIPLVHVDASELFLGQLDGVTDPEKKRKIIGGLFIDVFDAEANKIGGADFL 333

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+  +        TI++      L     + +  PL  L K E   L ++
Sbjct: 334 AQGTLYPDVIESVSAIG--GPSVTIKSHHNVGGLPARMKMKLVEPLRELFKDEVRALGRE 391

Query: 187 IGGQD 191
           +G  +
Sbjct: 392 LGLPE 396


>gi|75676895|ref|YP_319316.1| tRNA(Ile)-lysidine synthase [Nitrobacter winogradskyi Nb-255]
 gi|74421765|gb|ABA05964.1| tRNA(Ile)-lysidine synthase [Nitrobacter winogradskyi Nb-255]
          Length = 371

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 27/69 (39%), Gaps = 12/69 (17%)

Query: 7  KAPSALLL-FSGGQDSSTCLSW------ALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
          KA  AL+L  SGG DS   +        A+ R   +  ++ D    + +  E      ++
Sbjct: 35 KASRALVLAVSGGPDSVALMWLAARWRRAMKRGPDLVAVTVD----HALRREAARE-ARQ 89

Query: 60 IVELMPKWK 68
          + +L     
Sbjct: 90 VKQLAKSLS 98


>gi|56964502|ref|YP_176233.1| argininosuccinate synthase [Bacillus clausii KSM-K16]
 gi|68566236|sp|Q5WED8|ASSY_BACSK RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|56910745|dbj|BAD65272.1| argininosuccinate synthase [Bacillus clausii KSM-K16]
          Length = 403

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
              +L +SGG D+S  + W  D+   V  +  D G
Sbjct: 3  KEKVVLAYSGGLDTSVAVKWLTDKGYDVIAVGLDVG 38


>gi|89094123|ref|ZP_01167066.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Oceanospirillum sp. MED92]
 gi|89081598|gb|EAR60827.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Oceanospirillum sp. MED92]
          Length = 526

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 52/185 (28%), Gaps = 19/185 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMP 65
               LL  SGG DSS   +       D++  +  D G  R +   +      K +   + 
Sbjct: 228 NQKVLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRKQEGDQVMDMFAKNMGVRVI 287

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +          L L  L   +     + +          +      ++ FL         
Sbjct: 288 RADAED-----LFLGRLEGENDPEKKRKIIGNTFIEVFDDEATKLSDVNFLAQGTIY--- 339

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                        + +     +   I++      L  +    +  PL  L K E  KL  
Sbjct: 340 ---------PDVIESAAAKTGKAHVIKSHHNVGGLPEDMQFELVEPLRELFKDEVRKLGL 390

Query: 186 DIGGQ 190
           ++G  
Sbjct: 391 ELGLP 395


>gi|325283230|ref|YP_004255771.1| tRNA-specific 2-thiouridylase mnmA [Deinococcus proteolyticus MRP]
 gi|324315039|gb|ADY26154.1| tRNA-specific 2-thiouridylase mnmA [Deinococcus proteolyticus MRP]
          Length = 422

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 45/185 (24%), Gaps = 8/185 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L   SGG DSS   +   D+   V      +   +K       C          +  +
Sbjct: 61  RVLCAMSGGVDSSVTAALLKDQGYSVVGAMMRFWPDDKRTETFDSCCSPDAAYEARRVAE 120

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G      L    +     +      +      PN  V     +        A  LG  
Sbjct: 121 QVGVP--FYLLDYREQFQQHIVGPFIEEYAKGRTPNPCVNCNTKVKFDELVKKAKMLGCQ 178

Query: 130 NIVIGVCETDYSGYPDCRHDTI------RAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            +  G                                  E+   +  P+  L+K    ++
Sbjct: 179 YVATGHYVKRVVNERGEVEFWRGDDPRKDQTYFLWGTPREALPYILFPVGELEKPRVREI 238

Query: 184 AQDIG 188
           A + G
Sbjct: 239 AAERG 243


>gi|322381177|ref|ZP_08055180.1| tRNAile lysidine synthetase-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
 gi|321154753|gb|EFX47024.1| tRNAile lysidine synthetase-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
          Length = 479

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 52/183 (28%), Gaps = 23/183 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALD----RFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
            + ++  SGG DS   L         +  +V     +    ++   E      K ++   
Sbjct: 21  DTVVVAVSGGPDSIALLHMLYRLSDEQGWKVIAAHVN----HQFRKEESAEEAKYVMSFA 76

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                   E  ++ +      +  +       K  +       V   + I L   A    
Sbjct: 77  SGLGIPC-EVGVIDVPAYIRETSLNPQVAAREKRYEFLHKIANVYNADKIALAHHADDQA 135

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
              +  IV G   +  +G P  R +               +V +  P++ + K E     
Sbjct: 136 ETVLMRIVRGTGLSGLTGIPIKRKE--------------KNVELVRPMLRIYKNEVISYC 181

Query: 185 QDI 187
            + 
Sbjct: 182 HEH 184


>gi|288937030|ref|YP_003441089.1| tRNA(Ile)-lysidine synthetase [Klebsiella variicola At-22]
 gi|290512451|ref|ZP_06551817.1| cell cycle protein MesJ [Klebsiella sp. 1_1_55]
 gi|288891739|gb|ADC60057.1| tRNA(Ile)-lysidine synthetase [Klebsiella variicola At-22]
 gi|289774792|gb|EFD82794.1| cell cycle protein MesJ [Klebsiella sp. 1_1_55]
          Length = 437

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 26/70 (37%), Gaps = 10/70 (14%)

Query: 12 LLLFSGGQDSSTCLS---WALDRFDRVE--TLSFDYGQRNKVELECRLCVRKKIVELMPK 66
          L+ FSGG DS+  L       ++   +    +   +G     +     C      ++  +
Sbjct: 20 LVAFSGGLDSTVLLHQLVLLREQDPSLTLRAVHVHHGLSAHADDWVAHC-----RQICQQ 74

Query: 67 WKDSLGEDHI 76
          W+  L   H+
Sbjct: 75 WQVPLVVHHV 84


>gi|261823623|ref|YP_003261729.1| argininosuccinate synthase [Pectobacterium wasabiae WPP163]
 gi|261607636|gb|ACX90122.1| argininosuccinate synthase [Pectobacterium wasabiae WPP163]
          Length = 448

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDEIPRRAMEYGAENARLID 72


>gi|238893184|ref|YP_002917918.1| tRNA(Ile)-lysidine synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|238545500|dbj|BAH61851.1| tRNA(Ile)-lysidine synthetase [Klebsiella pneumoniae subsp.
          pneumoniae NTUH-K2044]
          Length = 433

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 26/70 (37%), Gaps = 10/70 (14%)

Query: 12 LLLFSGGQDSSTCLS---WALDRFDRVE--TLSFDYGQRNKVELECRLCVRKKIVELMPK 66
          L+ FSGG DS+  L       ++   +    +   +G     +     C      ++  +
Sbjct: 16 LVAFSGGLDSTVLLHQLVLLREQDPSLTLRAVHVHHGLSAHADDWVAHC-----RQICQQ 70

Query: 67 WKDSLGEDHI 76
          W+  L   H+
Sbjct: 71 WQVPLVVHHV 80


>gi|269838417|ref|YP_003320645.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Sphaerobacter thermophilus DSM 20745]
 gi|269787680|gb|ACZ39823.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Sphaerobacter thermophilus DSM 20745]
          Length = 353

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 51/201 (25%), Gaps = 12/201 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L+  SGG DS+               +       +   +   +C   +         +
Sbjct: 3   RILVALSGGVDSAVAALTLQSLGWEPIGIHLRLFDSDPESIAEGVCCGDQAAFDARLVAN 62

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            LG    +    L +     +             PN  +   + + +     LA  LGI 
Sbjct: 63  WLGIPFYV--RDLREEFSREVAGMTVESYARAETPNPCIACNHRVRIPALLRLADSLGIP 120

Query: 130 NIVIGVCETDYSGYPD-----CRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            +  G                 R            L  E    +  PL  L K    + A
Sbjct: 121 AVATGHYVRKVRVGDRWYLAESRDGRRDQSYALYRLTSEDLERLEFPLGELDKETVRQRA 180

Query: 185 QDIGGQ-----DLVNLILEES 200
           +  G         V+L   ++
Sbjct: 181 RAAGLPVADKAASVDLCFAKT 201


>gi|206578043|ref|YP_002240324.1| tRNA(Ile)-lysidine synthase [Klebsiella pneumoniae 342]
 gi|206567101|gb|ACI08877.1| tRNA(Ile)-lysidine synthase [Klebsiella pneumoniae 342]
          Length = 437

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 26/70 (37%), Gaps = 10/70 (14%)

Query: 12 LLLFSGGQDSSTCLS---WALDRFDRVE--TLSFDYGQRNKVELECRLCVRKKIVELMPK 66
          L+ FSGG DS+  L       ++   +    +   +G     +     C      ++  +
Sbjct: 20 LVAFSGGLDSTVLLHQLVLLREQDPSLTLRAVHVHHGLSAHADDWVAHC-----RQICQQ 74

Query: 67 WKDSLGEDHI 76
          W+  L   H+
Sbjct: 75 WQVPLVVHHV 84


>gi|167465338|ref|ZP_02330427.1| tRNA(Ile)-lysidine synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 424

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 52/183 (28%), Gaps = 23/183 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALD----RFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
            + ++  SGG DS   L         +  +V     +    ++   E      K ++   
Sbjct: 21  DTVVVAVSGGPDSIALLHMLYRLSDEQGWKVIAAHVN----HQFRKEESAEEAKYVMSFA 76

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                   E  ++ +      +  +       K  +       V   + I L   A    
Sbjct: 77  SGLGIPC-EVGVIDVPAYIRETSLNPQVAAREKRYEFLHKIANVYNADKIALAHHADDQA 135

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
              +  IV G   +  +G P  R +               +V +  P++ + K E     
Sbjct: 136 ETVLMRIVRGTGLSGLTGIPIKRKE--------------KNVELVRPMLRIYKNEVISYC 181

Query: 185 QDI 187
            + 
Sbjct: 182 HEH 184


>gi|30020338|ref|NP_831969.1| asparagine synthetase [glutamine-hydrolyzing] [Bacillus cereus ATCC
           14579]
 gi|29895889|gb|AAP09170.1| Asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus ATCC
           14579]
          Length = 633

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 23/60 (38%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS   S A +    + T S  + QR   E++      +K+         S  E 
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGYSEVDVAKETAEKLGVKNHNVFISAKEF 322


>gi|50119065|ref|YP_048232.1| argininosuccinate synthase [Pectobacterium atrosepticum SCRI1043]
 gi|81693480|sp|Q6DAZ8|ASSY_ERWCT RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|49609591|emb|CAG73024.1| argininosuccinate synthase [Pectobacterium atrosepticum SCRI1043]
          Length = 448

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDEIPRRAMEYGAENARLID 72


>gi|93006688|ref|YP_581125.1| argininosuccinate synthase [Psychrobacter cryohalolentis K5]
 gi|119361312|sp|Q1Q9L2|ASSY_PSYCK RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|92394366|gb|ABE75641.1| argininosuccinate synthase [Psychrobacter cryohalolentis K5]
          Length = 412

 Score = 44.5 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 45/158 (28%), Gaps = 9/158 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K     +L +SGG D+S    W  + +D  V T + D GQ  +VE          I  + 
Sbjct: 7   KTINKIVLAYSGGLDTSIIARWLQETYDAEVITFTADIGQGEEVEPARAKAEAMGIKHIH 66

Query: 65  -PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
               ++    D++ P+     I         ++           +  R +         A
Sbjct: 67  IEDLREEFARDYVFPMFRANAIYEGEYLLGTSIARP-------LIAKRLVEIAKEHNADA 119

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
              G T         +             A     +L 
Sbjct: 120 ISHGATGKGNDQVRFELGAVALSPDVVTIAPWREWDLS 157


>gi|289549263|ref|YP_003474251.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Thermocrinis albus DSM 14484]
 gi|289182880|gb|ADC90124.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Thermocrinis albus DSM 14484]
          Length = 349

 Score = 44.1 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 44/180 (24%), Gaps = 4/180 (2%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
            SGG DSS       +    V  ++   Y      E     C  + + + +   +     
Sbjct: 7   MSGGVDSSVTALLLKEEGHEVIGVTLRFYKAVCNTEDLRVCCSPQDVKDAVLVSQRLGIP 66

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
              L    +              +    N            FL         +       
Sbjct: 67  HITLDWEKIFYERVIKYFVEGYKEGITPNPCAVCNREVKTGFLARYLRNVALIDRLATGH 126

Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL---KKYETWKLAQDIGGQ 190
            V +  Y GY           + +  + +     +      L    K E  K+A++ G  
Sbjct: 127 YVRKIQYMGYSLLARGKDTTRDQSYFMALVRGEDIPLLEFPLGDKTKEEVRKIAEEKGLP 186


>gi|256845877|ref|ZP_05551335.1| GMP synthase domain-containing protein [Fusobacterium sp. 3_1_36A2]
 gi|256719436|gb|EEU32991.1| GMP synthase domain-containing protein [Fusobacterium sp. 3_1_36A2]
          Length = 509

 Score = 44.1 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 58/187 (31%), Gaps = 18/187 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +        ++  +  D G   K E        K+++E+  K
Sbjct: 215 NKQVILGLSGGVDSSVAAALINKAIGKQLTCIFVDTGLLRKDE-------AKQVMEVYAK 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D   +        L  ++  +  +     I    +                   A  L
Sbjct: 268 NFDMNIKCINAEERFLSKLAGVTDPETKRKIIGKEFVE-------VFNEEAKKIEGAEFL 320

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+     P      I++      L  +    +  PL  L K E  K+ ++
Sbjct: 321 AQGTIYPDVIESVSVKGPSVT---IKSHHNVGGLPEDLKFELLEPLRELFKDEVRKVGRE 377

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 378 LGIPDYM 384


>gi|218129687|ref|ZP_03458491.1| hypothetical protein BACEGG_01266 [Bacteroides eggerthii DSM 20697]
 gi|317475981|ref|ZP_07935236.1| GMP synthase domain-containing protein [Bacteroides eggerthii
           1_2_48FAA]
 gi|217988099|gb|EEC54423.1| hypothetical protein BACEGG_01266 [Bacteroides eggerthii DSM 20697]
 gi|316907913|gb|EFV29612.1| GMP synthase domain-containing protein [Bacteroides eggerthii
           1_2_48FAA]
          Length = 517

 Score = 44.1 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 49/187 (26%), Gaps = 21/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D+G   K E +                
Sbjct: 214 DKVVLGLSGGVDSSVAAVLLNRAIGKNLTCIFVDHGMLRKNEFK---------------- 257

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                  H      L  +   +  K  A                     VF         
Sbjct: 258 ----NVLHDYECLGLNVVGVDASAKFFAELAGVTEPERKRKIIGKGFIDVFDEEAHKIKD 313

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G    D           I++      L  + H+ +  PL  L K E  ++ +++
Sbjct: 314 VKWLAQGTIYPDCIESLSITGTVIKSHHNVGGLPEKMHLKLCEPLRLLFKDEVRRVGREL 373

Query: 188 GGQDLVN 194
           G  D + 
Sbjct: 374 GMPDHLI 380


>gi|224586476|ref|YP_002640365.1| GMP synthase [glutamine-hydrolyzing] (Glutamineamidotransferase)
           [Borrelia valaisiana VS116]
 gi|224496966|gb|ACN52602.1| GMP synthase [glutamine-hydrolyzing] (Glutamineamidotransferase)
           [Borrelia valaisiana VS116]
          Length = 511

 Score = 44.1 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 57/184 (30%), Gaps = 23/184 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDR-VETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +L  SGG DS  C           +  +  + G   K E        KKI+EL  +
Sbjct: 215 SKKVILGLSGGTDSLVCALLIKKAIKENLICVFVNTGLLRKNED-------KKILELKDQ 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  +      +          + L      + +   +   FV     I L          
Sbjct: 268 YDLN------IKYINASAKFLNHLKNVSDPEEKRKIIGKEFVNIFEKITL-------EDQ 314

Query: 127 GITNIVIGVCETDY--SGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            I  +  G   +D   S   +     I++      L  +  + +  PL    K E  ++ 
Sbjct: 315 NIEYLAQGTIYSDVIESKSKNNTSSKIKSHHNVGGLPDKMRLKLLEPLNEFFKDEIIQIG 374

Query: 185 QDIG 188
            ++G
Sbjct: 375 INLG 378


>gi|153004390|ref|YP_001378715.1| GMP synthase [Anaeromyxobacter sp. Fw109-5]
 gi|152027963|gb|ABS25731.1| GMP synthase, large subunit [Anaeromyxobacter sp. Fw109-5]
          Length = 518

 Score = 44.1 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 47/181 (25%), Gaps = 14/181 (7%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+           DR+  +  D G               +  E     + 
Sbjct: 220 VICALSGGVDSAVAALLVHRAIGDRLRCIFVDNG-------------VLRAGERAQVEEV 266

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G  H+  + +       +    V    Q   +            +   A    R    
Sbjct: 267 FGGMFHLPLVTVDASARFLARLAGVTDPEQKRKIIGREFIAVFEEQVEDLAAHGERAQFL 326

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                  +   S        TI++      L     + +  PL  L K E  +L  ++G 
Sbjct: 327 VQGTLYPDVIESVSFKGPSATIKSHHNVGGLPEVMKLGLVEPLRELFKDEVRRLGLELGL 386

Query: 190 Q 190
            
Sbjct: 387 P 387


>gi|160878422|ref|YP_001557390.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Clostridium phytofermentans ISDg]
 gi|160427088|gb|ABX40651.1| GMP synthase, large subunit [Clostridium phytofermentans ISDg]
          Length = 507

 Score = 44.1 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 17/49 (34%), Gaps = 1/49 (2%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCV 56
              L   SGG DSS            ++  +  D+G   K E +    +
Sbjct: 212 KKVLCALSGGVDSSVAAVMISKAVGKQLTCIFVDHGLLRKNEGDEVEQI 260


>gi|84624072|ref|YP_451444.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|123521874|sp|Q2P2Q7|MNMA_XANOM RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|84368012|dbj|BAE69170.1| Probable tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 378

 Score = 44.1 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 46/188 (24%), Gaps = 11/188 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            P  ++  SGG DSS        + + +  L       +          R+  V +    
Sbjct: 3   TPHIVVGVSGGVDSSVAAWKLAQQGEPIAGLFMQNWADDGSGDCRAEDDRRDAVAVCGVL 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                               S + ++   +      PN  V     +        A  LG
Sbjct: 63  GMP------FHFRDFSGEYWSGVFEHFLAEYAAGRTPNPDVLCNREVKFKHFLDAAQALG 116

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G            R                 LG         P+  L+K    +
Sbjct: 117 AERIATGHYAQVAHRGRRWRLLRGADRDKDQSYFLHQLGQSQLAATLFPIGDLEKSTLRR 176

Query: 183 LAQDIGGQ 190
           +A+D G  
Sbjct: 177 IARDAGLP 184


>gi|255010205|ref|ZP_05282331.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Bacteroides fragilis 3_1_12]
          Length = 353

 Score = 44.1 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 23/179 (12%), Positives = 40/179 (22%), Gaps = 16/179 (8%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS      L+    V  ++F                 + + +          E 
Sbjct: 1   MSGGTDSSVAAMLLLEAGYEVTGVTFR--------FYEFNDSTEYLEDARALATRLGIEH 52

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI--- 131
                  +          +        + P       N +     A +A  +GI  +   
Sbjct: 53  ITYDAREIFRKKIVDYFIDE---YMAGHTPVPCTLCNNWLKWPLLAKIADEMGIFYLATG 109

Query: 132 --VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             V                           L  +    +  P+  + K E    A   G
Sbjct: 110 HYVRKKWMDGSYYITLAADPDKDQSFFLWGLKQDILQRMLLPMGEMTKPEARAYAAGRG 168


>gi|159905817|ref|YP_001549479.1| ExsB family protein [Methanococcus maripaludis C6]
 gi|159887310|gb|ABX02247.1| ExsB family protein [Methanococcus maripaludis C6]
          Length = 258

 Score = 44.1 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 23/62 (37%), Gaps = 1/62 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
          K    ++ +SGG DS+     A +   +   ++ D G  ++  +       KK       
Sbjct: 20 KNKKVIVAYSGGVDSTLISKIA-NDTTKTLAVTIDNGFFSENVITNAENRAKKYNIPQKT 78

Query: 67 WK 68
           K
Sbjct: 79 IK 80


>gi|148255024|ref|YP_001239609.1| GMP synthase [Bradyrhizobium sp. BTAi1]
 gi|146407197|gb|ABQ35703.1| GMP synthase (glutamine-hydrolyzing) [Bradyrhizobium sp. BTAi1]
          Length = 534

 Score = 44.1 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 55/185 (29%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DS+       +   D++  +  D+G     E        + +V+L   
Sbjct: 236 KGKVICGLSGGVDSAVAAVLIHEAIGDQLTCVFVDHGLLRLNE-------AETVVDLFRH 288

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +            LG+++            +        +              A  L
Sbjct: 289 HYNIPLVHVDASKLFLGELAGV-------TDPEQKRKTIGRLFIDVFEAEAKKIGGADFL 341

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+    +      TI++      L    ++ +  PL  L K E   L ++
Sbjct: 342 AQGTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPARMNMKLVEPLRELFKDEVRVLGRE 399

Query: 187 IGGQD 191
           +G  D
Sbjct: 400 LGLPD 404


>gi|332710661|ref|ZP_08430605.1| argininosuccinate synthase [Lyngbya majuscula 3L]
 gi|332350575|gb|EGJ30171.1| argininosuccinate synthase [Lyngbya majuscula 3L]
          Length = 417

 Score = 44.1 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 39/158 (24%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DS T   W  DR  +    + D GQ ++ ++       +K       +       
Sbjct: 21  VSGGLDSCTITRWLTDRGVKAICFTADLGQPDEKDISHIGDRIRKSGAYSHHFLHLQDHF 80

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
               L ++   +           I  + +    +       L   A  +   G   I   
Sbjct: 81  AEAGLKLIQAQAFYEGGYWNITGIARHIIVKGILEAMTQHKLSILAHGSTGRGNDQIRFQ 140

Query: 135 VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
           V     +            I      G    +      
Sbjct: 141 VMAHMLNPEVKLYAPWRDPIYLDKFQGRAEMIDFCQAH 178


>gi|255008100|ref|ZP_05280226.1| putative cell-cycle protein [Bacteroides fragilis 3_1_12]
 gi|313145817|ref|ZP_07808010.1| tRNA(Ile)-2-lysyl-cytidine synthase [Bacteroides fragilis 3_1_12]
 gi|313134584|gb|EFR51944.1| tRNA(Ile)-2-lysyl-cytidine synthase [Bacteroides fragilis 3_1_12]
          Length = 431

 Score = 44.1 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 22/69 (31%), Gaps = 1/69 (1%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L+  SGG DS   L   L      E    ++  R   E +      +++       
Sbjct: 19 NDKVLVALSGGADSVALLRLLLSMGYTCEATHCNFHLR-DKESDRDEAFVRQLCHEAEVP 77

Query: 68 KDSLGEDHI 76
            ++  D I
Sbjct: 78 LHTVHFDTI 86


>gi|229493125|ref|ZP_04386917.1| sulfate adenylyltransferase subunit 2 [Rhodococcus erythropolis
           SK121]
 gi|229319856|gb|EEN85685.1| sulfate adenylyltransferase subunit 2 [Rhodococcus erythropolis
           SK121]
          Length = 317

 Score = 44.1 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 4/61 (6%)

Query: 12  LLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++LFSGG+DS+  L  A+  F         L  D G   +  L+ R  V  K    +   
Sbjct: 48  VILFSGGKDSTVLLHLAIKAFWPAPLPFTLLHVDTGHNLQEVLDFRDHVVAKYNLRLHVA 107

Query: 68  K 68
            
Sbjct: 108 S 108


>gi|226307235|ref|YP_002767195.1| sulfate adenylyltransferase subunit 2 [Rhodococcus erythropolis
           PR4]
 gi|226186352|dbj|BAH34456.1| sulfate adenylyltransferase subunit 2 [Rhodococcus erythropolis
           PR4]
          Length = 311

 Score = 44.1 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 4/61 (6%)

Query: 12  LLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++LFSGG+DS+  L  A+  F         L  D G   +  L+ R  V  K    +   
Sbjct: 42  VILFSGGKDSTVLLHLAIKAFWPAPLPFTLLHVDTGHNLQEVLDFRDHVVAKYNLRLHVA 101

Query: 68  K 68
            
Sbjct: 102 S 102


>gi|163840499|ref|YP_001624904.1| GMP synthase [Renibacterium salmoninarum ATCC 33209]
 gi|162953975|gb|ABY23490.1| GMP synthase (glutamine-hydrolyzing) [Renibacterium salmoninarum
           ATCC 33209]
          Length = 529

 Score = 44.1 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 51/184 (27%), Gaps = 11/184 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DS+   +       D++  +  D+G   + E E          + +  
Sbjct: 224 SGKVICGLSGGVDSAVAAALVQRAVGDQLTCVFVDHGLLREGEAEQVER------DFVAV 277

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +L          L  ++  S  +     I    + +     R ++          + 
Sbjct: 278 TGVNLYVAREAD-RFLDALAGVSDPETKRKIIGREFIRSFEEAERALVAQAGQDGEQIK- 335

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   +               I++      L  +    +  PL  L K E   +   
Sbjct: 336 --FLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPDDLQFDLVEPLRALFKDEVRSVGAQ 393

Query: 187 IGGQ 190
           +G  
Sbjct: 394 LGLP 397


>gi|110596963|ref|ZP_01385253.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Chlorobium ferrooxidans DSM 13031]
 gi|110341650|gb|EAT60110.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Chlorobium ferrooxidans DSM 13031]
          Length = 361

 Score = 44.1 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 14/37 (37%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
          + +    ++  SGG DS+T           V  L+  
Sbjct: 1  MGEQKKVVVGISGGVDSATTACLLKKAGYAVTGLNIR 37


>gi|21280318|dbj|BAB96811.1| probable sulfate adenylyltransferase subunit 2 [Rhodococcus
           erythropolis]
          Length = 317

 Score = 44.1 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 4/61 (6%)

Query: 12  LLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++LFSGG+DS+  L  A+  F         L  D G   +  L+ R  V  K    +   
Sbjct: 48  VILFSGGKDSTVLLHLAIKAFWPAPLPFTLLHVDTGHNLQEVLDFRDHVVAKYNLRLHVA 107

Query: 68  K 68
            
Sbjct: 108 S 108


>gi|84499552|ref|ZP_00997840.1| NAD(+) synthase [Oceanicola batsensis HTCC2597]
 gi|84392696|gb|EAQ04907.1| NAD(+) synthase [Oceanicola batsensis HTCC2597]
          Length = 552

 Score = 44.1 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 55/203 (27%), Gaps = 16/203 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALD----RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
             LL  SGG DS+   + A D       R   L  +Y   + +E      V + +     
Sbjct: 286 KVLLGLSGGIDSAIVATIAADALGPENVRCVMLPSEYTSDHSLED--ARAVARALGCRYH 343

Query: 66  KWKDSLGEDHILP-LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
               S G   I   LA L + +   +T+          L          + L        
Sbjct: 344 DLPISQGRQAITETLAPLFEGTDPDVTEENIQSRLRGLLLMALSNKFGEMLLTTGNKSEV 403

Query: 125 RLGITNIVIGVCETDYSGYPDCRH------DTIRAIETAINLGMESHV---TVHTPLMWL 175
            +G   I   +           +           A      +G    V    + T     
Sbjct: 404 AVGYATIYGDMAGGYNPIKDLYKTRVFEQCRWRNANHRDWMMGPPGEVIPDRIITKPPSA 463

Query: 176 KKYETWKLAQDIGGQDLVNLILE 198
           +     K +  +    +++ IL 
Sbjct: 464 ELRADQKDSDSLPDYPVLDAILN 486


>gi|291542781|emb|CBL15891.1| GMP synthase (glutamine-hydrolyzing) [Ruminococcus bromii L2-63]
          Length = 517

 Score = 44.1 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 53/187 (28%), Gaps = 20/187 (10%)

Query: 9   PSALLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              ++L  SGG DSS   +        ++  +  D G            +RK   + + +
Sbjct: 221 DKGVVLGLSGGVDSSVAAALLSKAVGKQLTCVFVDQG-----------LMRKDEGDFVEQ 269

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               L + + + +         +  K V    +  ++  T         +  +    Y  
Sbjct: 270 TFTKLFDMNFVRINC--QEEFLAKLKGVEEPEEKRHIIGTEFYKVFWNKIRESYGEGYFA 327

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
             T     +            H     I   I+        V  PL  L K E   + + 
Sbjct: 328 QGTIYPDRIESGKGDAAKIKTHHNQVGIPEDIDFA-----GVIEPLKDLFKDEVRVVGEK 382

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 383 LGLPHDL 389


>gi|206562606|ref|YP_002233369.1| argininosuccinate synthase [Burkholderia cenocepacia J2315]
 gi|226729209|sp|B4EM48|ASSY_BURCJ RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|198038646|emb|CAR54606.1| argininosuccinate synthase [Burkholderia cenocepacia J2315]
          Length = 445

 Score = 44.1 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 24/67 (35%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + +       + FSGG D+S  L W   +       + + GQ ++ + +       +   
Sbjct: 6  ESLPTGQKVGIAFSGGLDTSAALHWMKLKGAVPYAYTANLGQPDEDDYDAIPKRAIEYGA 65

Query: 63 LMPKWKD 69
             +  D
Sbjct: 66 AGARLID 72


>gi|171318966|ref|ZP_02908095.1| Argininosuccinate synthase [Burkholderia ambifaria MEX-5]
 gi|171095809|gb|EDT40759.1| Argininosuccinate synthase [Burkholderia ambifaria MEX-5]
          Length = 445

 Score = 44.1 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 24/67 (35%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + +       + FSGG D+S  L W   +       + + GQ ++ + +       +   
Sbjct: 6  ESLPTGQKVGIAFSGGLDTSAALHWMKLKGAVPYAYTANLGQPDEDDYDAIPKRAIEYGA 65

Query: 63 LMPKWKD 69
             +  D
Sbjct: 66 AGARLID 72


>gi|170698466|ref|ZP_02889538.1| Argininosuccinate synthase [Burkholderia ambifaria IOP40-10]
 gi|170136637|gb|EDT04893.1| Argininosuccinate synthase [Burkholderia ambifaria IOP40-10]
          Length = 445

 Score = 44.1 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 24/67 (35%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + +       + FSGG D+S  L W   +       + + GQ ++ + +       +   
Sbjct: 6  ESLPTGQKVGIAFSGGLDTSAALHWMKLKGAVPYAYTANLGQPDEDDYDAIPKRAIEYGA 65

Query: 63 LMPKWKD 69
             +  D
Sbjct: 66 AGARLID 72


>gi|172062628|ref|YP_001810279.1| argininosuccinate synthase [Burkholderia ambifaria MC40-6]
 gi|226729211|sp|B1Z0E2|ASSY_BURA4 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|171995145|gb|ACB66063.1| Argininosuccinate synthase [Burkholderia ambifaria MC40-6]
          Length = 445

 Score = 44.1 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 24/67 (35%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + +       + FSGG D+S  L W   +       + + GQ ++ + +       +   
Sbjct: 6  ESLPTGQKVGIAFSGGLDTSAALHWMKLKGAVPYAYTANLGQPDEDDYDAIPKRAIEYGA 65

Query: 63 LMPKWKD 69
             +  D
Sbjct: 66 AGARLID 72


>gi|78063246|ref|YP_373154.1| argininosuccinate synthase [Burkholderia sp. 383]
 gi|123565536|sp|Q392V6|ASSY_BURS3 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|77971131|gb|ABB12510.1| argininosuccinate synthase [Burkholderia sp. 383]
          Length = 444

 Score = 44.1 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 24/67 (35%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + +       + FSGG D+S  L W   +       + + GQ ++ + +       +   
Sbjct: 6  ESLPTGQKVGIAFSGGLDTSAALHWMKLKGAVPYAYTANLGQPDEDDYDAIPKRAIEYGA 65

Query: 63 LMPKWKD 69
             +  D
Sbjct: 66 AGARLID 72


>gi|115360195|ref|YP_777333.1| argininosuccinate synthase [Burkholderia ambifaria AMMD]
 gi|122320188|sp|Q0B4C4|ASSY_BURCM RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|115285483|gb|ABI90999.1| argininosuccinate synthase [Burkholderia ambifaria AMMD]
          Length = 445

 Score = 44.1 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 24/67 (35%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + +       + FSGG D+S  L W   +       + + GQ ++ + +       +   
Sbjct: 6  ESLPTGQKVGIAFSGGLDTSAALHWMKLKGAVPYAYTANLGQPDEDDYDAIPKRAIEYGA 65

Query: 63 LMPKWKD 69
             +  D
Sbjct: 66 AGARLID 72


>gi|194333188|ref|YP_002015048.1| hypothetical protein Paes_0344 [Prosthecochloris aestuarii DSM 271]
 gi|194311006|gb|ACF45401.1| hypothetical protein Paes_0344 [Prosthecochloris aestuarii DSM 271]
          Length = 243

 Score = 44.1 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 65/227 (28%), Gaps = 19/227 (8%)

Query: 5   IKKAPSALLLFSGGQDSS---TCLSWALDRFDRVETLSFDYG-QRNKVELECRLCVRKKI 60
           +       LL+SGG DS+     L    DR  R+  +  D G Q    E++    +RK++
Sbjct: 1   MPNNEIVNLLWSGGWDSTFRLCDLLLVQDRRVRLYYV-VDPGRQSVAQEIKAMQRIRKRL 59

Query: 61  VELMPKWKDSLGEDHILPL--AILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
            E +  +   L    ++ L          S                           +  
Sbjct: 60  QERIASFDTRLLSMQVVWLWEIAPESSMTSRYESLRKRFKSFGPQYEWLGRFVAEQGIGD 119

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
                               +     + R+  +   +   +   E   +   PL+   K 
Sbjct: 120 LELSIESNSFRPNGPLWSALEDMLVEEERNFRL--CDNPSDPDFEFFRSFRFPLIKTTKL 177

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACY 225
                A++ G     + I+ +S  C+          G  C  C  C+
Sbjct: 178 AMMHYAKEHG----FDDIMFQSWFCHTPH------NGRPCGICHPCH 214


>gi|107026993|ref|YP_624504.1| argininosuccinate synthase [Burkholderia cenocepacia AU 1054]
 gi|116691810|ref|YP_837343.1| argininosuccinate synthase [Burkholderia cenocepacia HI2424]
 gi|170736190|ref|YP_001777450.1| argininosuccinate synthase [Burkholderia cenocepacia MC0-3]
 gi|254248942|ref|ZP_04942262.1| Argininosuccinate synthase [Burkholderia cenocepacia PC184]
 gi|123071341|sp|Q1BLH4|ASSY_BURCA RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|123464522|sp|A0AYH4|ASSY_BURCH RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|226729210|sp|B1K5H3|ASSY_BURCC RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|105896367|gb|ABF79531.1| argininosuccinate synthase [Burkholderia cenocepacia AU 1054]
 gi|116649810|gb|ABK10450.1| argininosuccinate synthase [Burkholderia cenocepacia HI2424]
 gi|124875443|gb|EAY65433.1| Argininosuccinate synthase [Burkholderia cenocepacia PC184]
 gi|169818378|gb|ACA92960.1| Argininosuccinate synthase [Burkholderia cenocepacia MC0-3]
          Length = 445

 Score = 44.1 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 24/67 (35%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + +       + FSGG D+S  L W   +       + + GQ ++ + +       +   
Sbjct: 6  ESLPTGQKVGIAFSGGLDTSAALHWMKLKGAVPYAYTANLGQPDEDDYDAIPKRAIEYGA 65

Query: 63 LMPKWKD 69
             +  D
Sbjct: 66 AGARLID 72


>gi|134292821|ref|YP_001116557.1| argininosuccinate synthase [Burkholderia vietnamiensis G4]
 gi|166219954|sp|A4JLD9|ASSY_BURVG RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|134135978|gb|ABO57092.1| argininosuccinate synthase [Burkholderia vietnamiensis G4]
          Length = 445

 Score = 44.1 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 24/67 (35%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + +       + FSGG D+S  L W   +       + + GQ ++ + +       +   
Sbjct: 6  ESLPTGQKVGIAFSGGLDTSAALHWMKLKGAVPYAYTANLGQPDEDDYDAIPKRAIEYGA 65

Query: 63 LMPKWKD 69
             +  D
Sbjct: 66 AGARLID 72


>gi|284053008|ref|ZP_06383218.1| argininosuccinate synthase [Arthrospira platensis str. Paraca]
 gi|291570755|dbj|BAI93027.1| argininosuccinate synthase [Arthrospira platensis NIES-39]
          Length = 400

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 59/186 (31%), Gaps = 23/186 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +A  A+L +SGG D+S C+ +  + F    V T++ D GQ              ++  
Sbjct: 1   MGRAEKAVLAYSGGVDTSVCIPYLKNEFGVAEVITVAVDLGQG------------DELGP 48

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +  K  DS   + ++       +   +     A  + +N  P      R +I  +     
Sbjct: 49  VKQKALDSGASESLVIDVQQRFVQEFAFPAIQANALYENRYPLATALARPLIAQILVEV- 107

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A + G   I  G                     +   L     +        + + ET  
Sbjct: 108 AEKYGADAIAHGCTGKGNDQVRFD--------VSIGALNPNIKILAPAREWGMSREETIA 159

Query: 183 LAQDIG 188
             +  G
Sbjct: 160 YGEKCG 165


>gi|257458988|ref|ZP_05624107.1| GMP synthase [Campylobacter gracilis RM3268]
 gi|257443373|gb|EEV18497.1| GMP synthase [Campylobacter gracilis RM3268]
          Length = 511

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 51/181 (28%), Gaps = 21/181 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDR-VETLSFDYGQRNKVELECRLCVRK-KIVELMPKW 67
             L   SGG DSS   +       + +  +  D G     E +    + + K+       
Sbjct: 217 KVLCAVSGGVDSSVVAALLAHAVPQSLIAVFVDNGLLRTGERKAVEEMFRLKLGV----- 271

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    L +    ++  S L   V  + +   +  TF+   +              G
Sbjct: 272 --------SLDVIDASELFLSRLKGAVDPEQKRKIIGATFIEVFSKEAAKHKNVKFLAQG 323

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I       S          ++      L  +    +  PL  + K E  +L  ++
Sbjct: 324 TLYTDIIESSVAGSSKTI------KSHHNVGGLPKDMKFELIEPLREIFKDEVRQLGLEL 377

Query: 188 G 188
           G
Sbjct: 378 G 378


>gi|209967210|ref|YP_002300125.1| GMP synthase (glutamine-hydrolyzing) [Rhodospirillum centenum SW]
 gi|209960676|gb|ACJ01313.1| GMP synthase (glutamine-hydrolyzing) [Rhodospirillum centenum SW]
          Length = 525

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 56/183 (30%), Gaps = 17/183 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS       +   +++  +  D G     E        +++V L     
Sbjct: 229 KVICGLSGGVDSSVAAVLIHEAVGEQLTCIFVDTGLMRAGE-------AQEVVTLFRDHY 281

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +            LG++   S   +  +K +        V  R    +  A  LA     
Sbjct: 282 NIPLVHVDAADLFLGELEGVS---DPEVKRKTIGRLFIEVFDREAAKIGGAEFLAQGT-- 336

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
               +     +   +      TI++      L     + +  PL  L K E   L +++G
Sbjct: 337 ----LYPDVIESVSFTGGPSVTIKSHHNVGGLPERMKLKLVEPLRELFKDEVRALGRELG 392

Query: 189 GQD 191
              
Sbjct: 393 LPH 395


>gi|150025936|ref|YP_001296762.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Flavobacterium psychrophilum JIP02/86]
 gi|226738457|sp|A6H0T6|GUAA_FLAPJ RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|149772477|emb|CAL43960.1| GMP synthase [glutamine-hydrolyzing] [Flavobacterium psychrophilum
           JIP02/86]
          Length = 509

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 48/188 (25%), Gaps = 19/188 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +    +L  SGG DS+             +  +  + G   K E +  L   K +     
Sbjct: 212 QDDKVVLGLSGGVDSTVAAVLLHQAIGKNLYCIFVNNGLLRKNEFQSVLDQYKGMG---- 267

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                           +  +       +    I D       +    I      + +   
Sbjct: 268 --------------LNVKGVDAGDRFLSELAGISDPETKRKTIGRVFIEVFDDESKIIEN 313

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +          +   S        TI++      L     + +  PL  L K E  ++  
Sbjct: 314 VKWLAQGTIYPDVIESVSVKGPSATIKSHHNVGGLPDYMKLQIVEPLRMLFKDEVRRVGA 373

Query: 186 DIGGQDLV 193
            +G    +
Sbjct: 374 TLGIDAEL 381


>gi|114706565|ref|ZP_01439466.1| GMP synthetase [Fulvimarina pelagi HTCC2506]
 gi|114537957|gb|EAU41080.1| GMP synthetase [Fulvimarina pelagi HTCC2506]
          Length = 518

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 53/183 (28%), Gaps = 17/183 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS       +   D++  +  D+G               ++ E      
Sbjct: 222 KVICGLSGGVDSSVAAVLIHEAIGDQLTCIFVDHG-------------LLRLNEAEEVVS 268

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + + +PL  +             M  +        +              A  L  
Sbjct: 269 MF-RDHYNIPLVHVQAEDTFVDALEGEMDPEVKRKTIGRLFIETFEAEAKKLGGADFLAQ 327

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+    +      TI++      L    ++ +  PL  L K E   L +++G
Sbjct: 328 GTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMNMQLVEPLRELFKDEVRILGKELG 385

Query: 189 GQD 191
             +
Sbjct: 386 LPE 388


>gi|73666992|ref|YP_303008.1| argininosuccinate synthase [Ehrlichia canis str. Jake]
 gi|119361274|sp|Q3YS95|ASSY_EHRCJ RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|72394133|gb|AAZ68410.1| argininosuccinate synthase [Ehrlichia canis str. Jake]
          Length = 393

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 62/200 (31%), Gaps = 15/200 (7%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM-PK 66
              +L +SGG D+S  L W  + +   V   + D GQ + + +  +      + E+    
Sbjct: 2   KKIVLAYSGGLDTSVILKWLQENYNCEVVVFTADLGQDDDMSVIRQKATALNVKEIFIED 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            K+   +D + P+         + T      +   ++    +  R I             
Sbjct: 62  LKEEFVKDFVFPM-------FRANTVYEGYYLLGTSIARPLIAKRQIEIAKLTGADTVAH 114

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G T         ++  Y    +  + A      L   + +      +   K     +  D
Sbjct: 115 GATGKGNDQIRFEFGYYCCNPNIKVIAPWRQWKLTSRNSL------IEYAKKHGINVPLD 168

Query: 187 IGGQDLVNLILEESHTCYLG 206
              +   ++     HT Y G
Sbjct: 169 KSSEPPYSIDANLLHTSYEG 188


>gi|33240814|ref|NP_875756.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prochlorococcus marinus subsp. marinus str. CCMP1375]
 gi|81664194|sp|Q7VAT9|MNMA_PROMA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|33238343|gb|AAQ00409.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
          Length = 406

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 34/112 (30%), Gaps = 9/112 (8%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS   +  ++    VE ++        +      C    +V+     +      
Sbjct: 43  LSGGVDSSLTAALLVEAGWNVEGITL------WLMSGKGSCCTDGLVDAAGICEQLGIPH 96

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           H++      +     + +++    Q+   P+        +        A + 
Sbjct: 97  HVID---ARETFQREIIESLVKGYQEGMTPSPCSKCNRFVKFSPILEWAEQN 145


>gi|46200003|ref|YP_005670.1| argininosuccinate synthase [Thermus thermophilus HB27]
 gi|47605394|sp|P61526|ASSY_THET2 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|46197630|gb|AAS82043.1| argininosuccinate synthase [Thermus thermophilus HB27]
          Length = 400

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 2/80 (2%)

Query: 10 SALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKI-VELMPKW 67
            +L +SGG D+S  L W  +     V   + D GQ  +VE      +R      +    
Sbjct: 2  KIVLAYSGGLDTSIILKWLKETYGAEVIAFTADIGQGEEVEEAREKALRTGASKAIALDL 61

Query: 68 KDSLGEDHILPLAILGDISH 87
          K+    D + P+   G +  
Sbjct: 62 KEEFVRDFVFPMMRAGAVYE 81


>gi|315106189|gb|EFT78165.1| GMP synthase protein [Propionibacterium acnes HL030PA1]
          Length = 517

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 51/183 (27%), Gaps = 16/183 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +       D++  +  D+G   + E      V+   V       
Sbjct: 219 RVICGLSGGVDSAVAAALVQRAVGDQLTCVFVDHGLLRQGE---AEQVKNDFVAATGADL 275

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E      A+ G    +       +  ++       V  R           A +   
Sbjct: 276 VVADESQRFLDALAG---VTDPETKRKIIGREFIRTFEDVAKRLN---------ADQPID 323

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +   ++  PL  L K E   +  ++G
Sbjct: 324 FLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPDDFQFSLVEPLRTLFKDEVRAVGLELG 383

Query: 189 GQD 191
             +
Sbjct: 384 LPE 386


>gi|306836007|ref|ZP_07468999.1| argininosuccinate synthase [Corynebacterium accolens ATCC 49726]
 gi|304568173|gb|EFM43746.1| argininosuccinate synthase [Corynebacterium accolens ATCC 49726]
          Length = 406

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           +   +L +SGG D+S  +   A      V  +S D GQ  +     R     
Sbjct: 1  MSARVVLAYSGGLDTSVAIPYLAKMTGGDVVAVSLDLGQGGEDMESVRQRALD 53


>gi|255324647|ref|ZP_05365764.1| argininosuccinate synthase [Corynebacterium tuberculostearicum
          SK141]
 gi|255298553|gb|EET77853.1| argininosuccinate synthase [Corynebacterium tuberculostearicum
          SK141]
          Length = 406

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           +   +L +SGG D+S  +   A      V  +S D GQ  +     R     
Sbjct: 1  MSARVVLAYSGGLDTSVAIPYLAKMTGGDVVAVSLDLGQGGEDMESVRQRALD 53


>gi|311740486|ref|ZP_07714313.1| argininosuccinate synthase [Corynebacterium pseudogenitalium ATCC
          33035]
 gi|311304006|gb|EFQ80082.1| argininosuccinate synthase [Corynebacterium pseudogenitalium ATCC
          33035]
          Length = 406

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           +   +L +SGG D+S  +   A      V  +S D GQ  +     R     
Sbjct: 1  MSARVVLAYSGGLDTSVAIPYLAKMTGGDVVAVSLDLGQGGEDMESVRQRALD 53


>gi|227501829|ref|ZP_03931878.1| argininosuccinate synthase [Corynebacterium accolens ATCC 49725]
 gi|227077854|gb|EEI15817.1| argininosuccinate synthase [Corynebacterium accolens ATCC 49725]
          Length = 406

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           +   +L +SGG D+S  +   A      V  +S D GQ  +     R     
Sbjct: 1  MSARVVLAYSGGLDTSVAIPYLAKMTGGDVVAVSLDLGQGGEDMESVRQRALD 53


>gi|226355410|ref|YP_002785150.1| GMP synthase [Deinococcus deserti VCD115]
 gi|259647676|sp|C1D0M2|GUAA_DEIDV RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226317400|gb|ACO45396.1| putative GMP synthase [Deinococcus deserti VCD115]
          Length = 511

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 52/185 (28%), Gaps = 17/185 (9%)

Query: 13  LLF--SGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           +L   SGG DSST          +R+  +  D+G     E E      + +   +     
Sbjct: 214 VLLGISGGVDSSTLALLLARAVGERLTAVFIDHGLLRLGEREQVEAALRPLGVNLVTVDA 273

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                       LG +   S   +   K +           R    L     LA     T
Sbjct: 274 R--------EEFLGSLRGVS---DPEQKRKIIGREFIRAFERETAKLGDFDFLAQG---T 319

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                +               I++      L  +    +  P   L K E  ++AQ +G 
Sbjct: 320 LYPDVIESAGGHHGDKSGAANIKSHHNVGGLPEDLKFKLVEPFRTLFKDEVREIAQLLGL 379

Query: 190 QDLVN 194
            D + 
Sbjct: 380 PDHIR 384


>gi|167837825|ref|ZP_02464708.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia thailandensis MSMB43]
          Length = 311

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 41/182 (22%), Gaps = 10/182 (5%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS       ++   V  L     + +     C         + +     +    
Sbjct: 1   MSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQ-----DWIDVVSVADLIG 55

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
             +            +      +      PN  V     I        A  LG   I  G
Sbjct: 56  IDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLGAQTIATG 115

Query: 135 VCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                               T         L          PL  + K +  ++A  IG 
Sbjct: 116 HYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTKVREIAAQIGL 175

Query: 190 QD 191
            +
Sbjct: 176 PN 177


>gi|154249688|ref|YP_001410513.1| PP-loop domain-containing protein [Fervidobacterium nodosum
          Rt17-B1]
 gi|154153624|gb|ABS60856.1| PP-loop domain protein [Fervidobacterium nodosum Rt17-B1]
          Length = 323

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 22/60 (36%), Gaps = 4/60 (6%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +K    L+  S G+DSS  L         VE L    G R+         V K + E
Sbjct: 42 KMFQKEDKVLVAVSSGKDSSAVLYALKKLGYNVEGLFLKMG-RHTN---AAERVVKSLQE 97


>gi|50843224|ref|YP_056451.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Propionibacterium acnes KPA171202]
 gi|81611253|sp|Q6A6X1|GUAA_PROAC RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|50840826|gb|AAT83493.1| GMP synthase [glutamine-hydrolyzing] [Propionibacterium acnes
           KPA171202]
          Length = 530

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 51/183 (27%), Gaps = 16/183 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +       D++  +  D+G   + E      V+   V       
Sbjct: 232 RVICGLSGGVDSAVAAALVQRAVGDQLTCVFVDHGLLRQGE---AEQVKNDFVAATGADL 288

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E      A+ G    +       +  ++       V  R           A +   
Sbjct: 289 VVADESQRFLDALAG---VTDPETKRKIIGREFIRTFEDVAKRLN---------ADQPID 336

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +   ++  PL  L K E   +  ++G
Sbjct: 337 FLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPDDFQFSLVEPLRTLFKDEVRAVGLELG 396

Query: 189 GQD 191
             +
Sbjct: 397 LPE 399


>gi|327313269|ref|YP_004328706.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella denticola F0289]
 gi|326945092|gb|AEA20977.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prevotella denticola F0289]
          Length = 360

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 22/183 (12%), Positives = 45/183 (24%), Gaps = 7/183 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K     +L SGG DSS  +          +      G   K E +C     + +      
Sbjct: 7   KNRRIAVLLSGGVDSSVVVYEFARLDLHPDCFYIRIGPEEKEEWDCNSE--EDMEMATAV 64

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +       ++      +  +      +             +  R I F  F   + +  
Sbjct: 65  ARRFGCRLQVVD--CHKEYWNQVTRYTMEKVKAGFTPNPDVMCNRLIKFGAFDEKMGHNY 122

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH---TPLMWLKKYETWKL 183
            +             G            +    L       +     P+   +K E  ++
Sbjct: 123 DLIATGHYAQTEWIDGRKWLTTSPDPVKDQTDFLAQLYDWQLKKALFPIGHYEKDEVRRI 182

Query: 184 AQD 186
           A+ 
Sbjct: 183 AER 185


>gi|255322169|ref|ZP_05363315.1| argininosuccinate synthase [Campylobacter showae RM3277]
 gi|255300542|gb|EET79813.1| argininosuccinate synthase [Campylobacter showae RM3277]
          Length = 407

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%)

Query: 5  IKKA-PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCV 56
          +K+     +L +SGG D+S  L W  D +   V T + D GQ  ++E   +  +
Sbjct: 1  MKEDVKKVVLAYSGGLDTSIILKWLQDEYKCEVVTFTADIGQGEELEPARQKAL 54


>gi|239625091|ref|ZP_04668122.1| asparagine synthase [Clostridiales bacterium 1_7_47_FAA]
 gi|239519321|gb|EEQ59187.1| asparagine synthase [Clostridiales bacterium 1_7_47FAA]
          Length = 273

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 34/85 (40%), Gaps = 8/85 (9%)

Query: 1  MNDIIKKAPSALLL-FSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKVELECRLC 55
          M +++ +    + L FSGG DSS         A++   +V  ++FD       +LE    
Sbjct: 13 MRELVSED---ICLAFSGGVDSSLLLKVAADAAVETGKKVYAVTFDSRLHPSCDLEIARR 69

Query: 56 VRKKIVELMPKWKDSLGEDHILPLA 80
          V  ++  +    +    E   + + 
Sbjct: 70 VAGELGGIHQVIEVDELEQEEIRMN 94


>gi|303281422|ref|XP_003060003.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226458658|gb|EEH55955.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 311

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 22/179 (12%), Positives = 48/179 (26%), Gaps = 14/179 (7%)

Query: 16  SGGQDSSTCLSWALDRFDRVETLSFDYGQRN---------KVELECRLCVRKKIVELMPK 66
           SGG DS+            V  +                 + +      V + +   + +
Sbjct: 6   SGGVDSAVTAWILKRAGYDVVGVLMRNWDEAEETGGECAFEKDQRDAAAVARSVGIELRE 65

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   H +    L D    + T N  +    +    + +       L+         
Sbjct: 66  VDFVKEYWHAVFQPFLRDFDGGASTPNPDLACNRHIKFGSLLK----HCLLDVKADVLCT 121

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           G    ++      +  +     +  ++     ++  E+      PL WL K E   +A 
Sbjct: 122 GHYAKIVRGPNGVFCLHTAEDKEKDQSYF-LASVKQEALRNACFPLGWLTKTEVRAIAA 179


>gi|87125503|ref|ZP_01081348.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Synechococcus sp. RS9917]
 gi|86166803|gb|EAQ68065.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Synechococcus sp. RS9917]
          Length = 583

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 49/186 (26%), Gaps = 13/186 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +  SGG DSS   +  ++   +VE L+        +      C  + +V+       
Sbjct: 213 RVAVGLSGGVDSSLTAALLVEAGWQVEGLTL------WLMSGKGACCAEGLVDAAGICDQ 266

Query: 70  SLGEDHILPLAILGDISHSS-----LTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                H++                   + +                     L        
Sbjct: 267 LGIPHHVVDFRAHFKEQIVDFLVQGYGEGITPLPCSRCNREVKFGPMLQWALDERGIERI 326

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYETWK 182
             G    +    ++D   +   R       ++    +L  E+   +  PL  L K +T  
Sbjct: 327 ATGHYARIRHGAQSDNGCHQLLRGCDSHKDQSYFLYDLPQEALGRLVFPLGELTKSDTRL 386

Query: 183 LAQDIG 188
            A   G
Sbjct: 387 EAARHG 392


>gi|323489888|ref|ZP_08095111.1| GMP synthase (glutamine-hydrolyzing) [Planococcus donghaensis
           MPA1U2]
 gi|323396457|gb|EGA89280.1| GMP synthase (glutamine-hydrolyzing) [Planococcus donghaensis
           MPA1U2]
          Length = 512

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 52/186 (27%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   +     
Sbjct: 218 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCMFVDHGLLRKGE---AESVMKTFADGFNMN 274

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G         +   K +       +V       L          G
Sbjct: 275 VIKIDARDRFMSKLEG-------VTDPEKKRKIIGNEFIYVFDDEASKL---------EG 318

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 319 MDFLAQGTLYTDIIESGTTTAQTIKSHHNVGGLPDDMQFKLIEPLNTLFKDEVRVLGTEL 378

Query: 188 GGQDLV 193
           G  + +
Sbjct: 379 GMPEEI 384


>gi|289555672|ref|ZP_06444882.1| GMP synthase guaA [Mycobacterium tuberculosis KZN 605]
 gi|289440304|gb|EFD22797.1| GMP synthase guaA [Mycobacterium tuberculosis KZN 605]
          Length = 524

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 52/184 (28%), Gaps = 16/184 (8%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A+   SGG DS+   +       DR+  +  D+G      L       +   + +     
Sbjct: 227 AICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHG------LLRAGERAQVQRDFVAATGA 280

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +L     +  A     + S ++     +            G     L          G  
Sbjct: 281 NLV---TVDAAETFLEALSGVSAPEGKRKIIGRQFIRAFEGAVRDVLDGKTAEFLVQGTL 337

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
              +                 I++      L  +   T+  PL  L K E   + +++G 
Sbjct: 338 YPDVVESGGGSGTA------NIKSHHNVGGLPDDLKFTLVEPLRLLFKDEVRAVGRELGL 391

Query: 190 QDLV 193
            + +
Sbjct: 392 PEEI 395


>gi|167761978|ref|ZP_02434105.1| hypothetical protein BACSTE_00323 [Bacteroides stercoris ATCC
           43183]
 gi|167700210|gb|EDS16789.1| hypothetical protein BACSTE_00323 [Bacteroides stercoris ATCC
           43183]
          Length = 431

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 23/191 (12%), Positives = 56/191 (29%), Gaps = 23/191 (12%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +++     L+  SGG DS   L          E    ++  R          VR+     
Sbjct: 15  LLQPTDKVLVALSGGADSVALLRLLQASGYDCEAAHCNFHLRGAESDRDEAFVRQ----- 69

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                      H +        + ++  +++++++    L   +           A  +A
Sbjct: 70  --LCVKQQVPLHTVHFD----TARTAEERHISIEMAARELRYGWFEEIRQKINADAIAVA 123

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
           +    +   + +     +G    R    +            +  +  PL+ L++ E    
Sbjct: 124 HHQDDSVETLLLNLIRGTGINGLRGIRPK------------NGHIVRPLLCLERKEIISY 171

Query: 184 AQDIGGQDLVN 194
              IG   + +
Sbjct: 172 LNRIGQDYVTD 182


>gi|110632855|ref|YP_673063.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Mesorhizobium sp. BNC1]
 gi|110283839|gb|ABG61898.1| GMP synthase (glutamine-hydrolyzing) [Chelativorans sp. BNC1]
          Length = 519

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 53/185 (28%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DSS       +   +++  +  D+G   K E        + +      
Sbjct: 221 SGKVICALSGGVDSSVAALLTHEAVGEQLTCILVDHGLMRKNE------AAEVVSMFREH 274

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +   L       L    D   S+L      + +   +   F+                  
Sbjct: 275 YNVPLV------LVDASDRFLSALEGETDPEKKRKTIGRLFIEVFEDEAKKLGGADFLVQ 328

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G           +   +      TI++      L    ++ +  PL  L K E   L + 
Sbjct: 329 GTLY----PDVIESVSFTGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRVLGRK 384

Query: 187 IGGQD 191
           +G  D
Sbjct: 385 LGLPD 389


>gi|15610532|ref|NP_217913.1| GMP synthase [Mycobacterium tuberculosis H37Rv]
 gi|31794577|ref|NP_857070.1| GMP synthase [Mycobacterium bovis AF2122/97]
 gi|121639321|ref|YP_979545.1| GMP synthase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148663260|ref|YP_001284783.1| GMP synthase [Mycobacterium tuberculosis H37Ra]
 gi|148824604|ref|YP_001289358.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Mycobacterium tuberculosis F11]
 gi|167968718|ref|ZP_02550995.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Mycobacterium tuberculosis H37Ra]
 gi|215405434|ref|ZP_03417615.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Mycobacterium tuberculosis 02_1987]
 gi|215413303|ref|ZP_03421988.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Mycobacterium tuberculosis 94_M4241A]
 gi|215428899|ref|ZP_03426818.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Mycobacterium tuberculosis T92]
 gi|215432363|ref|ZP_03430282.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Mycobacterium tuberculosis EAS054]
 gi|215447725|ref|ZP_03434477.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Mycobacterium tuberculosis T85]
 gi|218755175|ref|ZP_03533971.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Mycobacterium tuberculosis GM 1503]
 gi|219559470|ref|ZP_03538546.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Mycobacterium tuberculosis T17]
 gi|224991818|ref|YP_002646507.1| GMP synthase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253800443|ref|YP_003033444.1| GMP synthase guaA [Mycobacterium tuberculosis KZN 1435]
 gi|254552502|ref|ZP_05142949.1| GMP synthase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|260188453|ref|ZP_05765927.1| GMP synthase [Mycobacterium tuberculosis CPHL_A]
 gi|260202526|ref|ZP_05770017.1| GMP synthase [Mycobacterium tuberculosis T46]
 gi|260206763|ref|ZP_05774254.1| GMP synthase [Mycobacterium tuberculosis K85]
 gi|289444947|ref|ZP_06434691.1| GMP synthase guaA [Mycobacterium tuberculosis T46]
 gi|289449094|ref|ZP_06438838.1| GMP synthase guaA [Mycobacterium tuberculosis CPHL_A]
 gi|289571633|ref|ZP_06451860.1| GMP synthase guaA [Mycobacterium tuberculosis T17]
 gi|289576129|ref|ZP_06456356.1| GMP synthase guaA [Mycobacterium tuberculosis K85]
 gi|289747224|ref|ZP_06506602.1| bifunctional GMP synthase/glutamine amidotransferase [Mycobacterium
           tuberculosis 02_1987]
 gi|289752114|ref|ZP_06511492.1| GMP synthase guaA [Mycobacterium tuberculosis T92]
 gi|289755526|ref|ZP_06514904.1| bifunctional GMP synthase/glutamine amidotransferase [Mycobacterium
           tuberculosis EAS054]
 gi|289759557|ref|ZP_06518935.1| bifunctional GMP synthase/glutamine amidotransferase [Mycobacterium
           tuberculosis T85]
 gi|289763579|ref|ZP_06522957.1| gmp synthase [glutamine-hydrolyzing] guaA [Mycobacterium
           tuberculosis GM 1503]
 gi|294995830|ref|ZP_06801521.1| GMP synthase [Mycobacterium tuberculosis 210]
 gi|297636058|ref|ZP_06953838.1| GMP synthase [Mycobacterium tuberculosis KZN 4207]
 gi|297733058|ref|ZP_06962176.1| GMP synthase [Mycobacterium tuberculosis KZN R506]
 gi|298526879|ref|ZP_07014288.1| gmp synthase [glutamine-hydrolyzing] guaA [Mycobacterium
           tuberculosis 94_M4241A]
 gi|306777737|ref|ZP_07416074.1| GMP synthase guaA [Mycobacterium tuberculosis SUMu001]
 gi|306782464|ref|ZP_07420801.1| GMP synthase guaA [Mycobacterium tuberculosis SUMu002]
 gi|306786284|ref|ZP_07424606.1| GMP synthase guaA [Mycobacterium tuberculosis SUMu003]
 gi|306790654|ref|ZP_07428976.1| GMP synthase guaA [Mycobacterium tuberculosis SUMu004]
 gi|306795181|ref|ZP_07433483.1| GMP synthase guaA [Mycobacterium tuberculosis SUMu005]
 gi|306799372|ref|ZP_07437674.1| GMP synthase guaA [Mycobacterium tuberculosis SUMu006]
 gi|306805219|ref|ZP_07441887.1| GMP synthase guaA [Mycobacterium tuberculosis SUMu008]
 gi|306809404|ref|ZP_07446072.1| GMP synthase guaA [Mycobacterium tuberculosis SUMu007]
 gi|306969510|ref|ZP_07482171.1| GMP synthase guaA [Mycobacterium tuberculosis SUMu009]
 gi|306973855|ref|ZP_07486516.1| GMP synthase guaA [Mycobacterium tuberculosis SUMu010]
 gi|307081567|ref|ZP_07490737.1| GMP synthase guaA [Mycobacterium tuberculosis SUMu011]
 gi|307086176|ref|ZP_07495289.1| GMP synthase guaA [Mycobacterium tuberculosis SUMu012]
 gi|313660389|ref|ZP_07817269.1| GMP synthase [Mycobacterium tuberculosis KZN V2475]
 gi|61225467|sp|P0A5A1|GUAA_MYCTU RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|61225468|sp|P0A5A2|GUAA_MYCBO RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226739642|sp|A1KP87|GUAA_MYCBP RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226739644|sp|A5U871|GUAA_MYCTA RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|254800106|sp|C1AHL0|GUAA_MYCBT RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|1449391|emb|CAB01027.1| PROBABLE GMP SYNTHASE [GLUTAMINE-HYDROLYZING] GUAA (GLUTAMINE
           AMIDOTRANSFERASE) (GMP SYNTHETASE) [Mycobacterium
           tuberculosis H37Rv]
 gi|31620174|emb|CAD95617.1| PROBABLE GMP SYNTHASE [GLUTAMINE-HYDROLYZING] GUAA (GLUTAMINE
           AMIDOTRANSFERASE) (GMP SYNTHETASE) [Mycobacterium bovis
           AF2122/97]
 gi|121494969|emb|CAL73455.1| Probable GMP synthase [glutamine-hydrolyzing] guaA [Mycobacterium
           bovis BCG str. Pasteur 1173P2]
 gi|148507412|gb|ABQ75221.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Mycobacterium tuberculosis H37Ra]
 gi|148723131|gb|ABR07756.1| GMP synthase [glutamine-hydrolyzing] guaA [Mycobacterium
           tuberculosis F11]
 gi|224774933|dbj|BAH27739.1| GMP synthase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253321946|gb|ACT26549.1| GMP synthase guaA [Mycobacterium tuberculosis KZN 1435]
 gi|289417866|gb|EFD15106.1| GMP synthase guaA [Mycobacterium tuberculosis T46]
 gi|289422052|gb|EFD19253.1| GMP synthase guaA [Mycobacterium tuberculosis CPHL_A]
 gi|289540560|gb|EFD45138.1| GMP synthase guaA [Mycobacterium tuberculosis K85]
 gi|289545387|gb|EFD49035.1| GMP synthase guaA [Mycobacterium tuberculosis T17]
 gi|289687752|gb|EFD55240.1| bifunctional GMP synthase/glutamine amidotransferase [Mycobacterium
           tuberculosis 02_1987]
 gi|289692701|gb|EFD60130.1| GMP synthase guaA [Mycobacterium tuberculosis T92]
 gi|289696113|gb|EFD63542.1| bifunctional GMP synthase/glutamine amidotransferase [Mycobacterium
           tuberculosis EAS054]
 gi|289711085|gb|EFD75101.1| gmp synthase [glutamine-hydrolyzing] guaA [Mycobacterium
           tuberculosis GM 1503]
 gi|289715121|gb|EFD79133.1| bifunctional GMP synthase/glutamine amidotransferase [Mycobacterium
           tuberculosis T85]
 gi|298496673|gb|EFI31967.1| gmp synthase [glutamine-hydrolyzing] guaA [Mycobacterium
           tuberculosis 94_M4241A]
 gi|308213913|gb|EFO73312.1| GMP synthase guaA [Mycobacterium tuberculosis SUMu001]
 gi|308324857|gb|EFP13708.1| GMP synthase guaA [Mycobacterium tuberculosis SUMu002]
 gi|308329113|gb|EFP17964.1| GMP synthase guaA [Mycobacterium tuberculosis SUMu003]
 gi|308332950|gb|EFP21801.1| GMP synthase guaA [Mycobacterium tuberculosis SUMu004]
 gi|308336509|gb|EFP25360.1| GMP synthase guaA [Mycobacterium tuberculosis SUMu005]
 gi|308340386|gb|EFP29237.1| GMP synthase guaA [Mycobacterium tuberculosis SUMu006]
 gi|308344245|gb|EFP33096.1| GMP synthase guaA [Mycobacterium tuberculosis SUMu007]
 gi|308348235|gb|EFP37086.1| GMP synthase guaA [Mycobacterium tuberculosis SUMu008]
 gi|308352961|gb|EFP41812.1| GMP synthase guaA [Mycobacterium tuberculosis SUMu009]
 gi|308356783|gb|EFP45634.1| GMP synthase guaA [Mycobacterium tuberculosis SUMu010]
 gi|308360731|gb|EFP49582.1| GMP synthase guaA [Mycobacterium tuberculosis SUMu011]
 gi|308364343|gb|EFP53194.1| GMP synthase guaA [Mycobacterium tuberculosis SUMu012]
 gi|326905240|gb|EGE52173.1| GMP synthase guaA [Mycobacterium tuberculosis W-148]
 gi|328460175|gb|AEB05598.1| GMP synthase guaA [Mycobacterium tuberculosis KZN 4207]
          Length = 525

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 52/184 (28%), Gaps = 16/184 (8%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A+   SGG DS+   +       DR+  +  D+G      L       +   + +     
Sbjct: 228 AICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHG------LLRAGERAQVQRDFVAATGA 281

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +L     +  A     + S ++     +            G     L          G  
Sbjct: 282 NLV---TVDAAETFLEALSGVSAPEGKRKIIGRQFIRAFEGAVRDVLDGKTAEFLVQGTL 338

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
              +                 I++      L  +   T+  PL  L K E   + +++G 
Sbjct: 339 YPDVVESGGGSGTA------NIKSHHNVGGLPDDLKFTLVEPLRLLFKDEVRAVGRELGL 392

Query: 190 QDLV 193
            + +
Sbjct: 393 PEEI 396


>gi|15842990|ref|NP_338027.1| GMP synthase [Mycobacterium tuberculosis CDC1551]
 gi|254233998|ref|ZP_04927323.1| gmp synthase [glutamine-hydrolyzing] guaA [Mycobacterium
           tuberculosis C]
 gi|13883330|gb|AAK47841.1| GMP synthase [Mycobacterium tuberculosis CDC1551]
 gi|124599527|gb|EAY58631.1| gmp synthase [glutamine-hydrolyzing] guaA [Mycobacterium
           tuberculosis C]
 gi|323717883|gb|EGB27072.1| GMP synthase guaA [Mycobacterium tuberculosis CDC1551A]
          Length = 525

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 52/184 (28%), Gaps = 16/184 (8%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A+   SGG DS+   +       DR+  +  D+G      L       +   + +     
Sbjct: 228 AICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHG------LLRAGERAQVQRDFVAATGA 281

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +L     +  A     + S ++     +            G     L          G  
Sbjct: 282 NLV---TVDAAETFLEALSGVSAPEGKRKIIGRQFIRAFEGAVRDVLDGKTAEFLVQGTL 338

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
              +                 I++      L  +   T+  PL  L K E   + +++G 
Sbjct: 339 YPDVVESGGGSGTA------NIKSHHNVGGLPDDLKFTLVEPLRLLFKDEVRAVGRELGL 392

Query: 190 QDLV 193
            + +
Sbjct: 393 PEEI 396


>gi|320529055|ref|ZP_08030147.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Selenomonas artemidis F0399]
 gi|320138685|gb|EFW30575.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Selenomonas artemidis F0399]
          Length = 361

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 54/188 (28%), Gaps = 11/188 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK---VELECRLCVRKKIVELM 64
               ++  SGG DSS   +  L +   V  ++      N+    E +   C    + +  
Sbjct: 3   KERVVVAMSGGVDSSLAAALLLAQGYDVVGVTMRLSNENRDVDPENDRSCCSLSSVDDAR 62

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     +++   +    S      +  +  +  N             L+  +    
Sbjct: 63  RVADVLGIRHYVMDFTMPFQTSVIDYFLDEYLLGRTPNPCIACNRYIKFEGLLHKSA--- 119

Query: 125 RLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            LG +++  G            R                +L  E+   V  PL    K  
Sbjct: 120 ELGASHVATGHYARIDFDGGMYRLRKGKDVDKDQSYVLYHLNQETLAHVLLPLGDFDKGT 179

Query: 180 TWKLAQDI 187
           T ++A++ 
Sbjct: 180 TRRMAEEY 187


>gi|255692690|ref|ZP_05416365.1| tRNA(Ile)-lysidine synthase [Bacteroides finegoldii DSM 17565]
 gi|260621576|gb|EEX44447.1| tRNA(Ile)-lysidine synthase [Bacteroides finegoldii DSM 17565]
          Length = 426

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 21/68 (30%), Gaps = 3/68 (4%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR---NKVELECRLCVRKKI 60
          +       L+  SGG DS   L        R E    ++  R   +  + +    + +K 
Sbjct: 15 LFSSENKILVALSGGADSVALLCILHTAGYRCEAAHCNFHLRGEESNRDEQFVRQLCEKY 74

Query: 61 VELMPKWK 68
             +    
Sbjct: 75 KINLHTID 82


>gi|167770719|ref|ZP_02442772.1| hypothetical protein ANACOL_02065 [Anaerotruncus colihominis DSM
           17241]
 gi|167667314|gb|EDS11444.1| hypothetical protein ANACOL_02065 [Anaerotruncus colihominis DSM
           17241]
          Length = 248

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 35/128 (27%), Gaps = 10/128 (7%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           ++D   + P   + FSGG DS+  L  A      V         + + EL+      + +
Sbjct: 3   LSDFFAEHPRVAVAFSGGVDSAYLLYAAKTAGCDVHAYFIHSQFQPRFELDDTQRFVEML 62

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                          +L   +L D +  +         +       +   R   + V   
Sbjct: 63  ----------HVPLTVLDCDVLSDPAVCANDTLRCYYCKRALFTRLWQAARADGYDVLCD 112

Query: 121 TLAYRLGI 128
                   
Sbjct: 113 GTNASDEA 120


>gi|154252572|ref|YP_001413396.1| tRNA(Ile)-lysidine synthetase [Parvibaculum lavamentivorans DS-1]
 gi|154156522|gb|ABS63739.1| tRNA(Ile)-lysidine synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 443

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 5/47 (10%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWA-----LDRFDRVETLSFDYGQR 45
          ++K +    + FSGG DS   L  A       R   +   + D+G R
Sbjct: 26 VLKPSKKIAIAFSGGPDSLALLILAAEWAKKRRGISLVAFTVDHGLR 72


>gi|78187788|ref|YP_375831.1| GMP synthase [Chlorobium luteolum DSM 273]
 gi|91206815|sp|Q3B1J3|GUAA_PELLD RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|78167690|gb|ABB24788.1| GMP synthase (glutamine-hydrolyzing) [Chlorobium luteolum DSM 273]
          Length = 513

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 52/185 (28%), Gaps = 22/185 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             + +   SGG DS+            ++  +  D G   K E        +K++E +  
Sbjct: 220 KGTVICGISGGVDSTVAAVLVSKAIGKQLHCVFVDNGLLRKNE-------ARKVMEFLKP 272

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              ++       L  LG +   +  +                      F+          
Sbjct: 273 LGLNITLADSADL-FLGRLKGVASPEKK-------------RKIIGRTFIRVFEEHINEE 318

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                     +   S       +TI++      L     + +  PL  L K E   + ++
Sbjct: 319 KFLVQGTLYPDVIESQSVKGPSETIKSHHNVGGLPKRMKLKLIEPLRELFKDEVRAVGRE 378

Query: 187 IGGQD 191
           +G  +
Sbjct: 379 LGIPE 383


>gi|120598185|ref|YP_962759.1| GMP synthase [Shewanella sp. W3-18-1]
 gi|146293741|ref|YP_001184165.1| GMP synthase [Shewanella putrefaciens CN-32]
 gi|226739732|sp|A4Y8T3|GUAA_SHEPC RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226739736|sp|A1RHR0|GUAA_SHESW RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|120558278|gb|ABM24205.1| GMP synthase (glutamine-hydrolyzing) [Shewanella sp. W3-18-1]
 gi|145565431|gb|ABP76366.1| GMP synthase (glutamine-hydrolyzing) [Shewanella putrefaciens
           CN-32]
          Length = 525

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 49/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS            ++  +  D G     E                +  +
Sbjct: 230 VILGLSGGVDSSVVAMLLHRAIGKKLTCVFVDNGLLRLNE--------------AAQVME 275

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+   L +  +   +            +        V              A  L   
Sbjct: 276 MFGDHFGLNIIHVDAENRFLDAMKGVADPEAKRKIIGRVFVEIFDEESKKCANAKWLAQG 335

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S         I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 336 TIYPDVIESAGSATGKAHV--IKSHHNVGGLPDDMALGLVEPLRELFKDEVRKIGLELGL 393

Query: 190 Q 190
            
Sbjct: 394 P 394


>gi|187731505|ref|YP_001881298.1| GMP synthase [Shigella boydii CDC 3083-94]
 gi|226739738|sp|B2TXT2|GUAA_SHIB3 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|187428497|gb|ACD07771.1| GMP synthase (glutamine-hydrolyzing) [Shigella boydii CDC 3083-94]
          Length = 525

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVLDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLIEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|319642225|ref|ZP_07996884.1| hypothetical protein HMPREF9011_02484 [Bacteroides sp. 3_1_40A]
 gi|317386081|gb|EFV67001.1| hypothetical protein HMPREF9011_02484 [Bacteroides sp. 3_1_40A]
          Length = 233

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 63/228 (27%), Gaps = 47/228 (20%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVET-LSFDYGQRNKVELECRLCVRKKIVELM 64
                 +LL+SGG DS     W +D+  + +  L  D G +   E      +   +V   
Sbjct: 4   SSYEKKVLLYSGGMDS-----WLIDKIWKPDVKLYVDMGTKYSQEEI--KRLPADVVVEK 56

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                   ED I+PL                                 +I +        
Sbjct: 57  LDLSKWEREDKIIPLRN-----------------------------MYLIGIATNYGNEI 87

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            LG T     + ++        +       +       +  + +        K E  +  
Sbjct: 88  CLGATAGDRVLDKSPVFADIYEQLLNYLYQKQHWTEERKIKINLDFKR--YTKAELVRAF 145

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
              GG   ++     S +CY  +       G  C SC  C+ +   + 
Sbjct: 146 VAQGGD--MDEAFSSSFSCYTPE------HGKECWSCKPCFRKFIAFA 185


>gi|299133665|ref|ZP_07026859.1| GMP synthase, large subunit [Afipia sp. 1NLS2]
 gi|298591501|gb|EFI51702.1| GMP synthase, large subunit [Afipia sp. 1NLS2]
          Length = 531

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 54/183 (29%), Gaps = 17/183 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+       +   D++  +  D+G     E        + +V+L     
Sbjct: 235 RVICGLSGGVDSAVAAVLIHEAIGDQLTCVFVDHGLLRMAE-------AETVVDLFRHHY 287

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +            LG+++            +        +              A  L  
Sbjct: 288 NIPLVHVDASKTFLGELAGV-------TDPEAKRKIIGKLFIDVFDEEAKKIGGADFLAQ 340

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+    +      TI++      L     + +  PL  L K E   L +++G
Sbjct: 341 GTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPARMKMKLVEPLRELFKDEVRALGRELG 398

Query: 189 GQD 191
             D
Sbjct: 399 LPD 401


>gi|296273224|ref|YP_003655855.1| PP-loop domain-containing protein [Arcobacter nitrofigilis DSM
          7299]
 gi|296097398|gb|ADG93348.1| PP-loop domain protein [Arcobacter nitrofigilis DSM 7299]
          Length = 378

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
             A L FSGG DS+  L  A   +  +  +  +
Sbjct: 43 NGKAYLSFSGGLDSTVLLHIARLDYPDIVAVFCN 76


>gi|288802304|ref|ZP_06407744.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidine synthetase)
          (tRNA(Ile)-2-lysyl-cytidine synthase) [Prevotella
          melaninogenica D18]
 gi|288335271|gb|EFC73706.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidine synthetase)
          (tRNA(Ile)-2-lysyl-cytidine synthase) [Prevotella
          melaninogenica D18]
          Length = 456

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 23/59 (38%), Gaps = 3/59 (5%)

Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK---VELECRLCVRKKIVELMPKW 67
          L+  SGG DS   L    +   RVE +  ++  R +    + +    + ++      K 
Sbjct: 22 LVALSGGADSVALLLCLKELGYRVEAVHCNFNLRGEESLRDEQFCEDLCQRENIPFHKV 80


>gi|229094785|ref|ZP_04225791.1| tRNA(Ile)-lysidine synthase [Bacillus cereus Rock3-29]
 gi|228688653|gb|EEL42525.1| tRNA(Ile)-lysidine synthase [Bacillus cereus Rock3-29]
          Length = 480

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 24/197 (12%), Positives = 54/197 (27%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D++K+  + ++  SGG DS   L + L++                          + +V 
Sbjct: 21  DVLKECSTIVVGVSGGPDSLALLYYLLEK--------------------RAEKQLEIVVA 60

Query: 63  LMPKW--KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +      D   ED      +   +  +  T  V +                     F  
Sbjct: 61  HVDHMFRGDESHEDLQFVQDLCKGLGVTCETIRVNVSQYQQQYGMNAQVAARECRYAFLE 120

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKK 177
            +  +     + +G    D       R       +    + ++       +  PL+ + K
Sbjct: 121 RIMKKYDARYVALGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGYLIRPLLGVTK 180

Query: 178 YETWKLAQDIGGQDLVN 194
            E      +I     ++
Sbjct: 181 EEIVNYCNEINLIPRID 197


>gi|291286256|ref|YP_003503072.1| argininosuccinate synthase [Denitrovibrio acetiphilus DSM 12809]
 gi|290883416|gb|ADD67116.1| argininosuccinate synthase [Denitrovibrio acetiphilus DSM 12809]
          Length = 403

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 29/84 (34%), Gaps = 1/84 (1%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP-K 66
              +L +SGG D+S  L W   +   V     D GQ   VE      ++   V+     
Sbjct: 3  KDKVVLAYSGGLDTSVILKWLQLKGYDVVAYVADLGQLPDVEAIREKAMQSGAVDFYALD 62

Query: 67 WKDSLGEDHILPLAILGDISHSSL 90
           ++   +D + P      +     
Sbjct: 63 LQEEFVKDFVYPAVKFNALYEGRY 86


>gi|262193715|ref|YP_003264924.1| argininosuccinate synthase [Haliangium ochraceum DSM 14365]
 gi|262077062|gb|ACY13031.1| argininosuccinate synthase [Haliangium ochraceum DSM 14365]
          Length = 397

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 51/180 (28%), Gaps = 9/180 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCV-RKKIVE 62
           +      +L +SGG D+S  +   A      V     D GQ   +E   +  +       
Sbjct: 1   MSNVRKVVLAYSGGLDTSVAVRWIAETYGCEVICYCADVGQGEDLEGARQKALSLGASKA 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           ++   +++   D++ P    G I  S      ++           +    +  +      
Sbjct: 61  IVHDLRETFVRDYVFPALRAGAIYESEYLLGTSLARP-------CITHGLMEAVREEGAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A   G T         + + Y       I A            +  +     ++   T +
Sbjct: 114 AIGHGATGKGNDQVRFELAAYQIMPSVKIIAPWREWEYQGRRQLIDYAAERNIQIEATVE 173


>gi|87306814|ref|ZP_01088960.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Blastopirellula marina DSM 3645]
 gi|87290187|gb|EAQ82075.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Blastopirellula marina DSM 3645]
          Length = 363

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 12/29 (41%)

Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYG 43
           SGG DSS      L+    V  +   +G
Sbjct: 1  MSGGVDSSVAAHLLLEEGHEVIGVFMRHG 29


>gi|148255104|ref|YP_001239689.1| asparagine synthase, glutamine-hydrolyzing [Bradyrhizobium sp.
           BTAi1]
 gi|146407277|gb|ABQ35783.1| Asparagine synthase, glutamine-hydrolyzing [Bradyrhizobium sp.
           BTAi1]
          Length = 647

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 22/190 (11%), Positives = 46/190 (24%), Gaps = 5/190 (2%)

Query: 15  FSGGQDSSTCLSWALDRFDR-VETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
            SGG DS + L+ A    +R  +  +  Y      E         ++     +   +   
Sbjct: 260 LSGGIDSMSVLALAAATTNRAPDAFTIAYEDAAYDESHRAESFATQLGTRFHRVPVNGAA 319

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
              L       + HS              L          + L          G     +
Sbjct: 320 ---LADHFATSLWHSETACFNPHGTAKFILSKAVRDAGYKVVLTGEGADEIFAGYAPSRV 376

Query: 134 GVCETDYSGYPDCRHDTIRAIE-TAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDL 192
                  +               T  +   +    +      +  +   ++A  +G  DL
Sbjct: 377 DALGGSAAMQAMIATRDRATYAVTPQHTATDQLPLIAQRFGTVPTWLRHQMAHLLGVADL 436

Query: 193 VNLILEESHT 202
           +   L  + +
Sbjct: 437 LRDDLRTAWS 446


>gi|325841863|ref|ZP_08167494.1| GMP synthase (glutamine-hydrolyzing) [Turicibacter sp. HGF1]
 gi|325489818|gb|EGC92171.1| GMP synthase (glutamine-hydrolyzing) [Turicibacter sp. HGF1]
          Length = 511

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 55/187 (29%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           + + L   SGG DSS   +       D++  +  D+G   K E      V +        
Sbjct: 216 SENVLCALSGGVDSSVVAALIHRAIGDQLTCMFVDHGLLRKGE---AESVVETFDGKFNM 272

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +       L  L  +S     + +                 N     F    A   
Sbjct: 273 NFIKIDAQERF-LNKLKGVSDPEQKRKI---------------IGNEFVYCFDEESAKLK 316

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +  +  G   TD          TI++      L  +    +  PL  L K E  +L  +
Sbjct: 317 DMKFLAQGTLYTDIIESGTDTAQTIKSHHNVGGLPEDMEFELIEPLNTLFKDEVRQLGLE 376

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 377 LGLPEEI 383


>gi|293374623|ref|ZP_06620939.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Turicibacter sanguinis PC909]
 gi|292646773|gb|EFF64767.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Turicibacter sanguinis PC909]
          Length = 511

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 55/187 (29%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           + + L   SGG DSS   +       D++  +  D+G   K E      V +        
Sbjct: 216 SENVLCALSGGVDSSVVAALIHRAIGDQLTCMFVDHGLLRKGE---AESVVETFDGKFNM 272

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +       L  L  +S     + +                 N     F    A   
Sbjct: 273 NFIKIDAQERF-LNKLKGVSDPEQKRKI---------------IGNEFVYCFDEESAKLK 316

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +  +  G   TD          TI++      L  +    +  PL  L K E  +L  +
Sbjct: 317 DMKFLAQGTLYTDIIESGTDTAQTIKSHHNVGGLPEDMEFELIEPLNTLFKDEVRQLGLE 376

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 377 LGLPEEI 383


>gi|226325767|ref|ZP_03801285.1| hypothetical protein COPCOM_03580 [Coprococcus comes ATCC 27758]
 gi|225205891|gb|EEG88245.1| hypothetical protein COPCOM_03580 [Coprococcus comes ATCC 27758]
          Length = 515

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 45/185 (24%), Gaps = 16/185 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS            ++  +  D+G   K E +    V            
Sbjct: 218 RVLLALSGGVDSSVAAGLLSRAIGKQLTCVFVDHGLLRKNEGDEVEAV------------ 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G +    L  +   +       +A    +       +    I      A     +  
Sbjct: 266 --FGPNGQFDLNFIRVNAQERYYNKLAGVT-EPEAKRKIIGEEFIRIFEEEAKKIGAVEF 322

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   SG                         +  PL  L K E  K   ++G
Sbjct: 323 LAQGTIYPDVVESGLGGESAVIKSHHNVGGLPEYVDFKEIIEPLRDLFKDEVRKAGLELG 382

Query: 189 GQDLV 193
             + +
Sbjct: 383 LPEKL 387


>gi|28572507|ref|NP_789287.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Tropheryma whipplei TW08/27]
 gi|81629880|sp|Q83HX5|MNMA_TROW8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|28410639|emb|CAD67025.1| probable tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Tropheryma whipplei TW08/27]
          Length = 359

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 20/146 (13%), Positives = 39/146 (26%), Gaps = 5/146 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             L   SGG DS+   + A+D    V  +       ++     R C   +  +   +   
Sbjct: 2   KVLAAMSGGVDSAVAAARAVDMGHDVVGVHLA---LSRSASGKRGCCTPRDAQDAAQAAQ 58

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++G    +      +     +  N   +      PN  +     I        A  LG  
Sbjct: 59  TIGIPFYVW--DFSEEFQEKVIDNFISEYSAGRTPNPCLRCNEHIKFSSLLRRALALGFD 116

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIE 155
            +  G     +            +  
Sbjct: 117 AVCTGHYARVFLDEDGTYQLHRASSW 142


>gi|60679087|gb|AAX33830.1| CysD [Campylobacter jejuni subsp. jejuni]
          Length = 301

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 59/187 (31%), Gaps = 13/187 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCV 56
           M ++I +     +L+S G+DSS  L      F      +  +  D   + K  +E R   
Sbjct: 19  MREVISEFEKPAMLYSIGKDSSVMLHLLQKAFYPATPPLPLVHVDTTWKFKEMIEFRDKR 78

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
            K++   +  + +  G++  +   I G   H+ + K  A+K   +      V G      
Sbjct: 79  AKELGMELIVYTNPKGKEINISPFIHGSNMHTDIMKTQALKQMLDLYQFDAVFGGARRD- 137

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
                         I     E       + R +         N      V    PL    
Sbjct: 138 -----EEKSRAKERIYSFRDENHTWDPKNQRPELWNLYNGRHNKKESIRV---FPLSNWT 189

Query: 177 KYETWKL 183
           + + W+ 
Sbjct: 190 ELDIWQY 196


>gi|322375226|ref|ZP_08049740.1| tRNA(Ile)-lysidine synthetase [Streptococcus sp. C300]
 gi|321280726|gb|EFX57765.1| tRNA(Ile)-lysidine synthetase [Streptococcus sp. C300]
          Length = 425

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 24/211 (11%), Positives = 48/211 (22%), Gaps = 13/211 (6%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKV-ELECRLCVR 57
           +  KK    +L  SGG DS            +    +     ++ QR++    E  L   
Sbjct: 14  EYFKKHSKVVLALSGGLDSMFLFQLLSTYQKELGIELIVAHVNHKQRSESDWEENELRKL 73

Query: 58  KKIVELMPKWKDSLGED-----HILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGR 111
               EL        G+                I         V     D+ +    +   
Sbjct: 74  ADAAELPIYITSFSGDFSEARAREFRYDFFRKIMKEVGATALVTAHHADDQVETILMRLI 133

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
               L     +     + +I I      +              +            +   
Sbjct: 134 RGSRLRHLTGIKESQVVDDIEIIRPLLPFHKKDFPPIFHFE--DQTNQENTYFRNRIRNR 191

Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEESHT 202
            +   + E  +L   +          + + T
Sbjct: 192 YLPELEKENPRLKSALLDLGREISDYQATIT 222


>gi|311897503|dbj|BAJ29911.1| hypothetical protein KSE_41230 [Kitasatospora setae KM-6054]
          Length = 523

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 19/60 (31%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSST    A              G+    +L+    V + +  +  +      E 
Sbjct: 174 LSGGLDSSTLAVLAARHGPVTGFTYHPKGRDEGGDLDHARAVARAVPRIRHRLMALGPEH 233


>gi|220913321|ref|YP_002488630.1| GMP synthase [Arthrobacter chlorophenolicus A6]
 gi|219860199|gb|ACL40541.1| GMP synthase, large subunit [Arthrobacter chlorophenolicus A6]
          Length = 529

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 24/182 (13%), Positives = 48/182 (26%), Gaps = 11/182 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +       D++  +  D+G   + E      V +  V      K
Sbjct: 226 RVICGLSGGVDSAVAAALVQRAVGDQLTCVFVDHGLLREGE---AEQVERDFVAATG-VK 281

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             +  +    L+ L  +S     + +  +          +                  G 
Sbjct: 282 LYIANEQERFLSALAGVSDPETKRKIIGREFIRAFEEAELAIIAEAAAHGEKIKFLVQGT 341

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
               +                 I++      L  +    +  PL  L K E   +   +G
Sbjct: 342 LYPDVVESGGG------EGAANIKSHHNVGGLPEDLQFELVEPLRALFKDEVRAVGAQLG 395

Query: 189 GQ 190
             
Sbjct: 396 LP 397


>gi|242278578|ref|YP_002990707.1| PP-loop domain protein [Desulfovibrio salexigens DSM 2638]
 gi|242121472|gb|ACS79168.1| PP-loop domain protein [Desulfovibrio salexigens DSM 2638]
          Length = 310

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 18/42 (42%)

Query: 2  NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
           ++++     L+  SGG+DS   +    +    V  L  D G
Sbjct: 41 RNLLEPDDKVLVALSGGKDSLGLMYALSELGYDVTGLHIDLG 82


>gi|168217180|ref|ZP_02642805.1| argininosuccinate synthase [Clostridium perfringens NCTC 8239]
 gi|182380756|gb|EDT78235.1| argininosuccinate synthase [Clostridium perfringens NCTC 8239]
          Length = 403

 Score = 44.1 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 45/158 (28%), Gaps = 9/158 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +KK    +L +SGG D+S  + W  +     V  +  + GQ  ++       ++    ++
Sbjct: 1   MKKFNKVILAYSGGLDTSIIIPWLKENYGCEVIAVVGNVGQSEELVGLKEKAIKTGASKI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     ED+I P    G              +   +     +  R +         
Sbjct: 61  YIEDLTKEFVEDYIFPTIQAGAKYEG-------KYLLGTSFARPIIAKRLVEIAKLEGAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         + +         I A      +
Sbjct: 114 AICHGCTGKGNDQVRFELAIKTFNPEMQIIAPWRTWAI 151


>gi|313894426|ref|ZP_07827991.1| argininosuccinate synthase [Veillonella sp. oral taxon 158 str.
          F0412]
 gi|313441250|gb|EFR59677.1| argininosuccinate synthase [Veillonella sp. oral taxon 158 str.
          F0412]
          Length = 403

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQ 44
          + KA   +L +SGG D+S  + W  +     V  +  D GQ
Sbjct: 1  MGKANKVVLAYSGGLDTSVIIPWLKENYGSEVIAVCVDLGQ 41


>gi|309790353|ref|ZP_07684919.1| asparagine synthase (glutamine-hydrolyzing) [Oscillochloris
           trichoides DG6]
 gi|308227619|gb|EFO81281.1| asparagine synthase (glutamine-hydrolyzing) [Oscillochloris
           trichoides DG6]
          Length = 630

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 25/65 (38%), Gaps = 1/65 (1%)

Query: 15  FSGGQDSSTCLSWALDRFDR-VETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
            SGG DSS  ++   +R    V T S  + +R+  E      V ++      ++     +
Sbjct: 263 LSGGIDSSIIVALMAERTREPVRTFSIGFEERHFSETHYACQVAERYATEHHEFIFRPAD 322

Query: 74  DHILP 78
              + 
Sbjct: 323 LVRVI 327


>gi|227509450|ref|ZP_03939499.1| argininosuccinate synthase [Lactobacillus brevis subsp.
          gravesensis ATCC 27305]
 gi|227191162|gb|EEI71229.1| argininosuccinate synthase [Lactobacillus brevis subsp.
          gravesensis ATCC 27305]
          Length = 431

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          + +    +L +SGG D+S  + W  D+   V     + G
Sbjct: 1  MTENKKVILAYSGGLDTSVAIPWLNDKGYDVVACCINVG 39


>gi|227512153|ref|ZP_03942202.1| argininosuccinate synthase [Lactobacillus buchneri ATCC 11577]
 gi|227524117|ref|ZP_03954166.1| argininosuccinate synthase [Lactobacillus hilgardii ATCC 8290]
 gi|227084547|gb|EEI19859.1| argininosuccinate synthase [Lactobacillus buchneri ATCC 11577]
 gi|227088748|gb|EEI24060.1| argininosuccinate synthase [Lactobacillus hilgardii ATCC 8290]
          Length = 431

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          + +    +L +SGG D+S  + W  D+   V     + G
Sbjct: 1  MTENKKVILAYSGGLDTSVAIPWLNDKGYDVVACCINVG 39


>gi|166032156|ref|ZP_02234985.1| hypothetical protein DORFOR_01859 [Dorea formicigenerans ATCC
           27755]
 gi|166027879|gb|EDR46636.1| hypothetical protein DORFOR_01859 [Dorea formicigenerans ATCC
           27755]
          Length = 515

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 45/185 (24%), Gaps = 16/185 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS            ++  +  D+G   K E +    V            
Sbjct: 218 KVLLALSGGVDSSVAAGLLSRAIGKQLTCVFVDHGLLRKDEGDEVEGV------------ 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G +    L  +   +       +A    +       +    I      A     +  
Sbjct: 266 --FGPNGQFDLNFIRVNAQQRYYDKLAGVT-EPEAKRKIIGEEFIRIFEEEAKKIGAVDF 322

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   SG                         +  PL  L K E  K   ++G
Sbjct: 323 LAQGTIYPDVVESGLGGESAVIKSHHNVGGLPDYVDFKEIIEPLRDLFKDEVRKAGLELG 382

Query: 189 GQDLV 193
             + +
Sbjct: 383 IPENL 387


>gi|71003538|ref|XP_756435.1| hypothetical protein UM00288.1 [Ustilago maydis 521]
 gi|46096040|gb|EAK81273.1| hypothetical protein UM00288.1 [Ustilago maydis 521]
          Length = 484

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 14/36 (38%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
           +K    ++  SGG DSS   +        +E +   
Sbjct: 82  QKGERVVVALSGGVDSSVTAALLAQADFDLEAVFMR 117


>gi|327274550|ref|XP_003222040.1| PREDICTED: asparagine synthetase [glutamine-hydrolyzing]-like
           [Anolis carolinensis]
          Length = 561

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 33/127 (25%), Gaps = 4/127 (3%)

Query: 13  LLFSGGQDSSTCLSW---ALDRFDRVETL-SFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            L SGG DSS   +     +   +    L +F  G  +  +L     V   I     +  
Sbjct: 255 CLLSGGLDSSLVAAMLIKLMKEQNISYPLQTFAIGMEDAPDLLASRKVAAHIGSQHHEVI 314

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  E   +   ++  +    +T   A                + +      +     G 
Sbjct: 315 FNSEEGIQVLEDVIFSLETYDITTVRASVGMYLISQYIRKKTDSAVIFSGEGSDELTQGY 374

Query: 129 TNIVIGV 135
                  
Sbjct: 375 IYFHKAP 381


>gi|305664132|ref|YP_003860420.1| argininosuccinate synthase [Ignisphaera aggregans DSM 17230]
 gi|304378701|gb|ADM28540.1| argininosuccinate synthase [Ignisphaera aggregans DSM 17230]
          Length = 395

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 3/57 (5%)

Query: 10 SALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
            +L +SGG D+ST L     ++   V T++ D GQ  + EL        ++  +  
Sbjct: 2  RVVLAYSGGLDTSTILVLLRKKYNAEVITVTVDVGQ--EDELRDVEKRAYELGAIKH 56


>gi|226360387|ref|YP_002778165.1| sulfate adenylyltransferase subunit 2 [Rhodococcus opacus B4]
 gi|226238872|dbj|BAH49220.1| sulfate adenylyltransferase subunit 2 [Rhodococcus opacus B4]
          Length = 317

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 50/180 (27%), Gaps = 17/180 (9%)

Query: 12  LLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++LFSGG+DS+  L  A+  F         L  D G   +  L+ R  V  K    +   
Sbjct: 48  VILFSGGKDSTVLLHLAIKAFWPAPLPFALLHVDTGHNLQEVLDFRDHVVSKYNLRLHVA 107

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           K             L D   +     +   +Q   L +     R       A     R  
Sbjct: 108 K---------VEDYLADGRLTERPDGIRNPLQTVPLLDAISENRFDAVFGGARRDEERAR 158

Query: 128 ITN-IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I               R +         + G +  V    PL    + + W+    
Sbjct: 159 AKERIFSLRNSFGQWDPKKQRPELWNLYNGKHSPGEQVRV---FPLSNFTELDIWRYIAR 215


>gi|20093801|ref|NP_613648.1| GMP synthase subunit B [Methanopyrus kandleri AV19]
 gi|23821599|sp|Q8TYD7|GUAAB_METKA RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
           AltName: Full=GMP synthetase
 gi|19886718|gb|AAM01578.1| PP-ATPase subunit of GMP synthase [Methanopyrus kandleri AV19]
          Length = 314

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 52/185 (28%), Gaps = 25/185 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A++  SGG DS+T            +  +  D+G   K E E                 
Sbjct: 23  KAIIAVSGGVDSTTAAVLTHRAIGSHLVCVFVDHGFMRKGEPERIR-------------- 68

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                     L       +    +      +           R II   F      R+  
Sbjct: 69  ---------ELLEEELGLNLRFVEAAEEFFEALRGVTDPEEKRKIIGEKFIEV-FERIAE 118

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                 + +   +         I++      L  + ++ V  PL  L K E  ++A+ +G
Sbjct: 119 EEEAEVLVQGTIAPDIIESERGIKSHHNVGGLPEKLNLDVVEPLRDLYKDEVREVARYLG 178

Query: 189 GQDLV 193
             D +
Sbjct: 179 IPDEI 183


>gi|325964061|ref|YP_004241967.1| GMP synthase (glutamine-hydrolyzing) [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323470148|gb|ADX73833.1| GMP synthase (glutamine-hydrolyzing) [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 516

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/182 (13%), Positives = 48/182 (26%), Gaps = 11/182 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +       D++  +  D+G   + E      V +  V      K
Sbjct: 213 RVICGLSGGVDSAVAAALVQRAVGDQLTCVFVDHGLLREGE---AEQVERDFVAATG-VK 268

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             +  +    L+ L  +S     + +  +          +                  G 
Sbjct: 269 LYVANEQERFLSALAGVSDPETKRKIIGREFIRAFEEAELAIIAEAAAHGEKIKFLVQGT 328

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
               +                 I++      L  +    +  PL  L K E   +   +G
Sbjct: 329 LYPDVVESGGG------EGAANIKSHHNVGGLPEDLQFELVEPLRALFKDEVRAVGAQLG 382

Query: 189 GQ 190
             
Sbjct: 383 LP 384


>gi|303231180|ref|ZP_07317918.1| argininosuccinate synthase [Veillonella atypica ACS-049-V-Sch6]
 gi|302514087|gb|EFL56091.1| argininosuccinate synthase [Veillonella atypica ACS-049-V-Sch6]
          Length = 403

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQ 44
          + KA   +L +SGG D+S  + W  +     V  +  D GQ
Sbjct: 1  MGKANKVVLAYSGGLDTSVIIPWLKENYGAEVIAVCVDLGQ 41


>gi|295148960|gb|ADF80960.1| putative LPS biosynthesis protein [Vibrio cholerae]
          Length = 379

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 25/205 (12%), Positives = 48/205 (23%), Gaps = 13/205 (6%)

Query: 1   MNDIIKKAP-----SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRL 54
           M D+I+K         ++  SGG DSS     A ++   R      D G      +    
Sbjct: 55  MADLIRKDSVGKDFDCIIGLSGGLDSSYAAYIAKEKMGLRPLLFHVDAGWNTDQAVGNIE 114

Query: 55  CVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            +   +   +     +  E   L +A L      +   +  +          +   R   
Sbjct: 115 KLVDGLGLDLYTEVVNWDEMRRLQVAFLR-----AGIPDQDLVQDAAFFSGLYKFARRHG 169

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
                    +                            +      L       +    +W
Sbjct: 170 IKHIITGSNFSTECCREPEEWGGYLGVDKILFGDIW--SKFGEGELKTFPLTDIVVYKLW 227

Query: 175 LKKYETWKLAQDIGGQDLVNLILEE 199
            +K    K+   +     V    E 
Sbjct: 228 YQKVLGMKVHHPLNLVPYVKQDAEN 252


>gi|294792727|ref|ZP_06757874.1| argininosuccinate synthase [Veillonella sp. 6_1_27]
 gi|294456626|gb|EFG24989.1| argininosuccinate synthase [Veillonella sp. 6_1_27]
          Length = 403

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQ 44
          + KA   +L +SGG D+S  + W  +     V  +  D GQ
Sbjct: 1  MGKANKVVLAYSGGLDTSVIIPWLKENYGAEVIAVCVDLGQ 41


>gi|282849809|ref|ZP_06259193.1| argininosuccinate synthase [Veillonella parvula ATCC 17745]
 gi|282580746|gb|EFB86145.1| argininosuccinate synthase [Veillonella parvula ATCC 17745]
          Length = 403

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQ 44
          + KA   +L +SGG D+S  + W  +     V  +  D GQ
Sbjct: 1  MGKANKVVLAYSGGLDTSVIIPWLKENYGAEVIAVCVDLGQ 41


>gi|238018537|ref|ZP_04598963.1| hypothetical protein VEIDISOL_00364 [Veillonella dispar ATCC
          17748]
 gi|303229857|ref|ZP_07316634.1| argininosuccinate synthase [Veillonella atypica ACS-134-V-Col7a]
 gi|237865008|gb|EEP66298.1| hypothetical protein VEIDISOL_00364 [Veillonella dispar ATCC
          17748]
 gi|302515487|gb|EFL57452.1| argininosuccinate synthase [Veillonella atypica ACS-134-V-Col7a]
          Length = 403

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQ 44
          + KA   +L +SGG D+S  + W  +     V  +  D GQ
Sbjct: 1  MGKANKVVLAYSGGLDTSVIIPWLKENYGAEVIAVCVDLGQ 41


>gi|269798624|ref|YP_003312524.1| argininosuccinate synthase [Veillonella parvula DSM 2008]
 gi|294794479|ref|ZP_06759615.1| argininosuccinate synthase [Veillonella sp. 3_1_44]
 gi|269095253|gb|ACZ25244.1| argininosuccinate synthase [Veillonella parvula DSM 2008]
 gi|294454809|gb|EFG23182.1| argininosuccinate synthase [Veillonella sp. 3_1_44]
          Length = 403

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQ 44
          + KA   +L +SGG D+S  + W  +     V  +  D GQ
Sbjct: 1  MGKANKVVLAYSGGLDTSVIIPWLKENYGAEVIAVCVDLGQ 41


>gi|222869573|gb|EEF06704.1| predicted protein [Populus trichocarpa]
          Length = 192

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 3/72 (4%)

Query: 1  MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I++  P      + FSGG D+S  L W  ++       + + GQ ++ + +      
Sbjct: 1  METILQNVPVGQKVGIAFSGGLDTSAALRWMKNKGALPYAYTANLGQPDEADYDEIPRKA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 MEYGAEQARLID 72


>gi|254428365|ref|ZP_05042072.1| ExsB family [Alcanivorax sp. DG881]
 gi|196194534|gb|EDX89493.1| ExsB family [Alcanivorax sp. DG881]
          Length = 523

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 55/185 (29%), Gaps = 26/185 (14%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKW- 67
           ++L  SGG DSS   +       D++  +  D G  R++   +        +   + +  
Sbjct: 228 VILGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRHQEGDQVMEMFADNMGVKVIRVD 287

Query: 68  --KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              + LG+        L      +   ++  +         ++    I   V  +  +  
Sbjct: 288 AEDNFLGKLAGEADPELKRKIIGNTFIDIFDEEAGKLENANWLAQGTIYPDVIESAASKT 347

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                I                    ++      L  +  + +  PL  L K E  K+  
Sbjct: 348 GKAHVI--------------------KSHHNVGGLPEDMKLKLVEPLRELFKDEVRKIGL 387

Query: 186 DIGGQ 190
           ++G  
Sbjct: 388 ELGLP 392


>gi|160900208|ref|YP_001565790.1| argininosuccinate synthase [Delftia acidovorans SPH-1]
 gi|226729175|sp|A9BM60|ASSY_DELAS RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|160365792|gb|ABX37405.1| Argininosuccinate synthase [Delftia acidovorans SPH-1]
          Length = 444

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 3/72 (4%)

Query: 1  MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I++  P      + FSGG D+S  L W  ++       + + GQ ++ + +      
Sbjct: 1  METILQNVPVGQKVGIAFSGGLDTSAALRWMKNKGALPYAYTANLGQPDEADYDEIPRKA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 MEYGAEQARLID 72


>gi|187478606|ref|YP_786630.1| argininosuccinate synthase [Bordetella avium 197N]
 gi|115423192|emb|CAJ49723.1| argininosuccinate synthase [Bordetella avium 197N]
          Length = 443

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 23/57 (40%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W  ++       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALLWMREKGAIPYAYTANLGQPDEPDYDEIPRRALQYGAENARLID 72


>gi|283957019|ref|ZP_06374491.1| hypothetical protein C1336_000330082 [Campylobacter jejuni subsp.
          jejuni 1336]
 gi|283791520|gb|EFC30317.1| hypothetical protein C1336_000330082 [Campylobacter jejuni subsp.
          jejuni 1336]
          Length = 327

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
           AL LFSGG DS   +     +   V+ L+ + G
Sbjct: 2  KALALFSGGLDSMLAMKLITAQGIEVKALNINIG 35


>gi|283783975|ref|YP_003363840.1| tRNA(Ile)-lysidine synthase [Citrobacter rodentium ICC168]
 gi|282947429|emb|CBG86975.1| tRNA(Ile)-lysidine synthase [Citrobacter rodentium ICC168]
          Length = 432

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 5/62 (8%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCL-----SWALDRFDRVETLSFDYGQRNKVELECRLC 55
          +N  +   P  L+ FSGG DS+  L       AL    R+  +   +G     +     C
Sbjct: 6  LNTSLFNRPQILVAFSGGLDSTVLLHQLVQWRALRPELRLRAIHIHHGLSPHADEWVAHC 65

Query: 56 VR 57
            
Sbjct: 66 EA 67


>gi|157415853|ref|YP_001483109.1| hypothetical protein C8J_1535 [Campylobacter jejuni subsp. jejuni
          81116]
 gi|157386817|gb|ABV53132.1| hypothetical protein C8J_1535 [Campylobacter jejuni subsp. jejuni
          81116]
 gi|307748489|gb|ADN91759.1| Putative uncharacterized protein [Campylobacter jejuni subsp.
          jejuni M1]
 gi|315931678|gb|EFV10639.1| thiamine biosynthesis protein:ExsB [Campylobacter jejuni subsp.
          jejuni 327]
          Length = 327

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
           AL LFSGG DS   +     +   V+ L+ + G
Sbjct: 2  KALALFSGGLDSMLAMKLITAQGIEVKALNINIG 35


>gi|148925774|ref|ZP_01809462.1| hypothetical protein Cj8486_1677 [Campylobacter jejuni subsp.
          jejuni CG8486]
 gi|145845784|gb|EDK22875.1| hypothetical protein Cj8486_1677 [Campylobacter jejuni subsp.
          jejuni CG8486]
          Length = 327

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
           AL LFSGG DS   +     +   V+ L+ + G
Sbjct: 2  KALALFSGGLDSMLAMKLITAQGIEVKALNINIG 35


>gi|94265042|ref|ZP_01288810.1| Thiamine biosynthesis protein [delta proteobacterium MLMS-1]
 gi|93454475|gb|EAT04763.1| Thiamine biosynthesis protein [delta proteobacterium MLMS-1]
          Length = 338

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 23/57 (40%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
          +AL LFSGG DS+      +++  +V  + F         L      R+K+      
Sbjct: 3  TALALFSGGLDSTLACRVMMEQGVKVVAVKFVSPFFGAELLAAPEAYRQKVRRQYGI 59


>gi|58582179|ref|YP_201195.1| tRNA-specific 2-thiouridylase MnmA [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|188576740|ref|YP_001913669.1| tRNA-specific 2-thiouridylase MnmA [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|188576931|ref|YP_001913860.1| tRNA-specific 2-thiouridylase MnmA [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|75435215|sp|Q5GZR1|MNMA_XANOR RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205829009|sp|B2SMD7|MNMA_XANOP RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|58426773|gb|AAW75810.1| tRNA methyltransferase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|188521192|gb|ACD59137.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188521383|gb|ACD59328.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 378

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 46/188 (24%), Gaps = 11/188 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            P  ++  SGG DSS        + + +  L       +          R+  V +    
Sbjct: 3   TPHIVVGVSGGVDSSVAAWKLAQQGEPIAGLFMQNWADDGSGDCRAEDDRRDAVAVCGVL 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                               S + ++   +      PN  V     +        A  LG
Sbjct: 63  GMP------FHFRDFSGEYWSGVFEHFLAEYAAGRTPNPDVLCNREVKFKHFLDAAQALG 116

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G            R                 LG         P+  L+K    +
Sbjct: 117 AERIATGHYAQVAHRGGRWRLLRGADRDKDQSYFLHQLGQSQLAATLFPIGDLEKSTLRR 176

Query: 183 LAQDIGGQ 190
           +A+D G  
Sbjct: 177 IARDAGLP 184


>gi|57238644|ref|YP_179775.1| hypothetical protein CJE1805 [Campylobacter jejuni RM1221]
 gi|57167448|gb|AAW36227.1| conserved hypothetical protein [Campylobacter jejuni RM1221]
 gi|315059083|gb|ADT73412.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Campylobacter jejuni subsp. jejuni S3]
          Length = 327

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
           AL LFSGG DS   +     +   V+ L+ + G
Sbjct: 2  KALALFSGGLDSMLAMKLITAQGIEVKALNINIG 35


>gi|86152221|ref|ZP_01070432.1| conserved hypothetical protein [Campylobacter jejuni subsp.
          jejuni 260.94]
 gi|86152888|ref|ZP_01071093.1| trna methyltransferase [Campylobacter jejuni subsp. jejuni
          HB93-13]
 gi|121613255|ref|YP_001001276.1| hypothetical protein CJJ81176_1624 [Campylobacter jejuni subsp.
          jejuni 81-176]
 gi|167006171|ref|ZP_02271929.1| hypothetical protein Cjejjejuni_08595 [Campylobacter jejuni
          subsp. jejuni 81-176]
 gi|315125038|ref|YP_004067042.1| hypothetical protein ICDCCJ07001_1546 [Campylobacter jejuni
          subsp. jejuni ICDCCJ07001]
 gi|85840710|gb|EAQ57961.1| conserved hypothetical protein [Campylobacter jejuni subsp.
          jejuni 260.94]
 gi|85843773|gb|EAQ60983.1| trna methyltransferase [Campylobacter jejuni subsp. jejuni
          HB93-13]
 gi|87249979|gb|EAQ72938.1| conserved hypothetical protein [Campylobacter jejuni subsp.
          jejuni 81-176]
 gi|315018760|gb|ADT66853.1| conserved hypothetical protein [Campylobacter jejuni subsp.
          jejuni ICDCCJ07001]
          Length = 327

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
           AL LFSGG DS   +     +   V+ L+ + G
Sbjct: 2  KALALFSGGLDSMLAMKLITAQGIEVKALNINIG 35


>gi|67923187|ref|ZP_00516675.1| Asparagine synthase [Crocosphaera watsonii WH 8501]
 gi|67854973|gb|EAM50244.1| Asparagine synthase [Crocosphaera watsonii WH 8501]
          Length = 585

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 21/191 (10%), Positives = 51/191 (26%), Gaps = 2/191 (1%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK--WKDS 70
           +  SGG DSS   +  +    +V   + ++ + N  E      V K +   + K      
Sbjct: 219 ICLSGGLDSSIIAALLVKLGVKVRAYTLEFEKDNLSEYPYAEMVAKHLNIPLVKVSITPE 278

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
             + H++      D+            +       T +           A    +  I  
Sbjct: 279 KIKKHLIKAVRALDLPFGDGVTLPLYLLYQTASQETEMIFNGENGDQLFAGWTNKPIIAA 338

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
            +      +Y      ++             + +    +  L+   +             
Sbjct: 339 NIYQFQHPEYQKDFTEQYLQTFHHLYGYEKRIFTSEIYNQLLLNEPREAIQSSLDKEFST 398

Query: 191 DLVNLILEESH 201
           DL++ +   + 
Sbjct: 399 DLLDRLRRATL 409


>gi|86149399|ref|ZP_01067630.1| conserved hypothetical protein [Campylobacter jejuni subsp.
          jejuni CF93-6]
 gi|88596449|ref|ZP_01099686.1| conserved hypothetical protein [Campylobacter jejuni subsp.
          jejuni 84-25]
 gi|218563222|ref|YP_002345002.1| putative ATP-binding protein [Campylobacter jejuni subsp. jejuni
          NCTC 11168]
 gi|85840181|gb|EAQ57439.1| conserved hypothetical protein [Campylobacter jejuni subsp.
          jejuni CF93-6]
 gi|88191290|gb|EAQ95262.1| conserved hypothetical protein [Campylobacter jejuni subsp.
          jejuni 84-25]
 gi|112360929|emb|CAL35730.1| putative ATP-binding protein [Campylobacter jejuni subsp. jejuni
          NCTC 11168]
 gi|284926827|gb|ADC29179.1| putative ATP-binding protein [Campylobacter jejuni subsp. jejuni
          IA3902]
 gi|315928868|gb|EFV08130.1| thiamine biosynthesis protein:ExsB [Campylobacter jejuni subsp.
          jejuni 305]
          Length = 327

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
           AL LFSGG DS   +     +   V+ L+ + G
Sbjct: 2  KALALFSGGLDSMLAMKLITAQGIEVKALNINIG 35


>gi|300865976|ref|ZP_07110712.1| Asparagine synthase [Oscillatoria sp. PCC 6506]
 gi|300336042|emb|CBN55870.1| Asparagine synthase [Oscillatoria sp. PCC 6506]
          Length = 593

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 20/46 (43%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           +L SGG DSS   +  ++   +V   S D+G     EL     V  
Sbjct: 227 VLLSGGIDSSLVTALLVEAGLQVRAYSLDFGVEGYSELPYAQQVAD 272


>gi|293611169|ref|ZP_06693467.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826420|gb|EFF84787.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325124118|gb|ADY83641.1| GMP synthetase (glutamine aminotransferase) [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 522

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 50/190 (26%), Gaps = 19/190 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMP 65
               LL  SGG DSS   +       D++  +  D G  R     +      + +     
Sbjct: 224 NEKVLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRLNEGDQVMQMFAENMG---- 279

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                      +  A       ++L   V  + +   +   F+                 
Sbjct: 280 ---------IRVIRADAEQRFLTALAGEVDPEKKRKIIGREFIEVFAEEARKLDGVKFLA 330

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G           + +     +   I++      L  +    +  PL  L K E  KL  
Sbjct: 331 QGTIY----PDVIESAASKQGKAHVIKSHHNVGGLPEDLAFELVEPLRDLFKDEVRKLGT 386

Query: 186 DIGGQDLVNL 195
            +G    +  
Sbjct: 387 TLGLPHSMIY 396


>gi|291533645|emb|CBL06758.1| argininosuccinate synthase [Megamonas hypermegale ART12/1]
          Length = 404

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQ 44
          ++     +L +SGG D+S  + W  +      V  +  D GQ
Sbjct: 1  MENIKKVVLAYSGGLDTSVIIPWLKENYNGCEVIAVCADIGQ 42


>gi|229009573|ref|ZP_04166800.1| tRNA(Ile)-lysidine synthase [Bacillus mycoides DSM 2048]
 gi|229053910|ref|ZP_04195345.1| tRNA(Ile)-lysidine synthase [Bacillus cereus AH603]
 gi|229131071|ref|ZP_04259984.1| tRNA(Ile)-lysidine synthase [Bacillus cereus BDRD-ST196]
 gi|229165052|ref|ZP_04292848.1| tRNA(Ile)-lysidine synthase [Bacillus cereus AH621]
 gi|228618437|gb|EEK75466.1| tRNA(Ile)-lysidine synthase [Bacillus cereus AH621]
 gi|228652408|gb|EEL08332.1| tRNA(Ile)-lysidine synthase [Bacillus cereus BDRD-ST196]
 gi|228721451|gb|EEL72971.1| tRNA(Ile)-lysidine synthase [Bacillus cereus AH603]
 gi|228751717|gb|EEM01516.1| tRNA(Ile)-lysidine synthase [Bacillus mycoides DSM 2048]
          Length = 480

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 22/197 (11%), Positives = 53/197 (26%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D++KK  + ++  SGG DS   L + L++                          + +V 
Sbjct: 21  DVLKKHSTIVVGVSGGPDSLALLYYLLEK--------------------RAEKQLEIVVA 60

Query: 63  LMPKW--KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +      +   ED      +  ++     T  + +                     F  
Sbjct: 61  HVDHMFRGNESYEDLQFVQGLCKELGVICETLRINVSQYQQQYGMNAQVAARECRYAFLE 120

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKK 177
            +  +     + +G    D       R       +    + ++       +  PL+ + K
Sbjct: 121 RIMKKYDARYVALGHHGDDQVETILMRLVRGSTPKGYAGIAVKRSFHNGYLIRPLLGVTK 180

Query: 178 YETWKLAQDIGGQDLVN 194
            E       +     ++
Sbjct: 181 EEIVDYCNKLKVIPRID 197


>gi|227363964|ref|ZP_03848065.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Lactobacillus reuteri MM2-3]
 gi|325683168|ref|ZP_08162684.1| GMP synthase [Lactobacillus reuteri MM4-1A]
 gi|227071019|gb|EEI09341.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Lactobacillus reuteri MM2-3]
 gi|324977518|gb|EGC14469.1| GMP synthase [Lactobacillus reuteri MM4-1A]
          Length = 538

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS           D++  +  D+G   K E +      + +  L    
Sbjct: 244 KKVILGLSGGVDSSVTAVLIHKAIGDQLTCIFVDHGLLRKNEAD------QVMDALSRDL 297

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             ++ +       +      +   +   +  ++                 F         
Sbjct: 298 GVNIIKVDAADRFLGKLEGVTDPEQKRKIIGKEFIEV-------------FNEEAKKIKD 344

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +  G   TD          TI++      L  +    +  PL  L K ET +L + +
Sbjct: 345 ADFLAQGTLYTDVIESGTDTAQTIKSHHNVGGLPKKLGFKLIEPLRKLFKDETRELGEKL 404

Query: 188 GGQDLV 193
           G    +
Sbjct: 405 GIPHEL 410


>gi|168001078|ref|XP_001753242.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162695528|gb|EDQ81871.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 542

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 52/178 (29%), Gaps = 9/178 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+   +       DR+  +  D G       + R  V    V+ +     
Sbjct: 238 VICALSGGVDSTVAATLVHRAIGDRLHCVFVDNG---LCRYKERERVMATFVKDLHLPVT 294

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +       L+ L  +      +   +   +          R    +        +  + 
Sbjct: 295 CVDATEQF-LSKLKGV--VDPERKRKIIGAEFIAVFDEFSHRLEREIGKMPAFLVQGTLY 351

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             VI  C    SG        I++      L     + +  PL WL K E  ++   +
Sbjct: 352 PDVIESCPPPGSGKSHSHT--IKSHHNVGGLPENMKLKLVEPLKWLFKDEVREMGALL 407


>gi|148544824|ref|YP_001272194.1| GMP synthase [Lactobacillus reuteri DSM 20016]
 gi|184154165|ref|YP_001842506.1| GMP synthase [Lactobacillus reuteri JCM 1112]
 gi|254800103|sp|A5VLY3|GUAA_LACRD RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|254800104|sp|B2G994|GUAA_LACRJ RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|148531858|gb|ABQ83857.1| GMP synthase (glutamine-hydrolyzing) [Lactobacillus reuteri DSM
           20016]
 gi|183225509|dbj|BAG26026.1| GMP synthase [Lactobacillus reuteri JCM 1112]
          Length = 517

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS           D++  +  D+G   K E +      + +  L    
Sbjct: 223 KKVILGLSGGVDSSVTAVLIHKAIGDQLTCIFVDHGLLRKNEAD------QVMDALSRDL 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             ++ +       +      +   +   +  ++                 F         
Sbjct: 277 GVNIIKVDAADRFLGKLEGVTDPEQKRKIIGKEFIEV-------------FNEEAKKIKD 323

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +  G   TD          TI++      L  +    +  PL  L K ET +L + +
Sbjct: 324 ADFLAQGTLYTDVIESGTDTAQTIKSHHNVGGLPKKLGFKLIEPLRKLFKDETRELGEKL 383

Query: 188 GGQDLV 193
           G    +
Sbjct: 384 GIPHEL 389


>gi|117928464|ref|YP_873015.1| argininosuccinate synthase [Acidothermus cellulolyticus 11B]
 gi|166219941|sp|A0LUB9|ASSY_ACIC1 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|117648927|gb|ABK53029.1| argininosuccinate synthase [Acidothermus cellulolyticus 11B]
          Length = 401

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVR 57
               +L +SGG D+S C+ W  ++    V  ++ D GQ   +E+  +  + 
Sbjct: 1  MTERVVLAYSGGLDTSVCIGWITEQTGAEVIAVAVDVGQGEDMEVIRKRALA 52


>gi|57168817|ref|ZP_00367948.1| conserved hypothetical protein [Campylobacter coli RM2228]
 gi|57019864|gb|EAL56547.1| conserved hypothetical protein [Campylobacter coli RM2228]
          Length = 327

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
           AL LFSGG DS   +     +   V+ L+ + G
Sbjct: 2  KALALFSGGLDSMLAMKLITAQGIEVKALNINIG 35


>gi|302382750|ref|YP_003818573.1| GMP synthase, large subunit [Brevundimonas subvibrioides ATCC
           15264]
 gi|302193378|gb|ADL00950.1| GMP synthase, large subunit [Brevundimonas subvibrioides ATCC
           15264]
          Length = 519

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 51/183 (27%), Gaps = 17/183 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS       +   D++  +  D G            + +K  +   +  
Sbjct: 223 KVICGLSGGVDSSVAAVLIHEAIGDQLTCVFVDTG------------LLRK--DEATQVT 268

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E + +PL  +                +        V              A  L  
Sbjct: 269 TLFREHYNIPLIHVDASKEFLGELAGQSDPETKRKIIGRVFIEVFDREAGKIDGAEFLAQ 328

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+  S         I++      L     + +  PL  L K E   L +++G
Sbjct: 329 GTLYPDVIESVSSSSGKAHV--IKSHHNVGGLPDYMKLKLVEPLRELFKDEVRALGRELG 386

Query: 189 GQD 191
             D
Sbjct: 387 LTD 389


>gi|251779527|ref|ZP_04822447.1| argininosuccinate synthase [Clostridium botulinum E1 str. 'BoNT E
          Beluga']
 gi|243083842|gb|EES49732.1| argininosuccinate synthase [Clostridium botulinum E1 str. 'BoNT E
          Beluga']
          Length = 330

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 27/90 (30%), Gaps = 3/90 (3%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           AL + SGG DS        ++   V  + F          E    + ++I   +     
Sbjct: 3  KALAMISGGLDSILAAKLIKEQGIEVIGICFK---SYFFNEENAKRMTQQIGIKLEVIDF 59

Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQ 99
          S     ++     G   + +   +    + 
Sbjct: 60 SEEHFDLVRNPKHGWGKNMNPCIDCHSMMM 89


>gi|251778156|ref|ZP_04821076.1| argininosuccinate synthase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243082471|gb|EES48361.1| argininosuccinate synthase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 407

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 59/217 (27%), Gaps = 26/217 (11%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + K    +L +SGG D+S  + W  + +   V  +  + GQ++++       ++    +L
Sbjct: 1   MNKLNKVILAYSGGLDTSIIIPWLKENYNCEVIAVCGNVGQKDELNGLEEKAIKTGASKL 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     ED+I P    G I            +   +     +  R +         
Sbjct: 61  YIEDLTKEFVEDYIFPTIQAGAIYEG-------KYLLGTSFARPLIGKRLVEIAKAEGAD 113

Query: 123 AYRLGITNI----------VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
           A   G T            V           P    D     +        +        
Sbjct: 114 AICHGCTGKGNDQVRFELAVKAFDPAMKIIAPWRTWDIKSREDEIAYAEARNVPIKINHE 173

Query: 173 MWLKKYETWKLAQDIG-------GQDLVNLILEESHT 202
               K +        G        +   + ILE S++
Sbjct: 174 TNYSKDKNIWHLSHEGLDLEDPKNEPKYDEILELSNS 210


>gi|296140099|ref|YP_003647342.1| argininosuccinate synthase [Tsukamurella paurometabola DSM 20162]
 gi|296028233|gb|ADG79003.1| argininosuccinate synthase [Tsukamurella paurometabola DSM 20162]
          Length = 473

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 61/206 (29%), Gaps = 26/206 (12%)

Query: 1   MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           M+ ++   P      + FSGG D+S  ++W  D+     T + + GQ ++ +++      
Sbjct: 1   MSKVLSTLPVGERVGIAFSGGLDTSVAVAWMRDKGAVPCTYTANIGQPDEPDIDAVPGRA 60

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           K+    + +          + +  L      +  +  A  I+              +   
Sbjct: 61  KEYGAEIARL---------VDVQPLLVQEGIAALQTGAFHIRSGGKTYFNTTPIGRVVTG 111

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                A +    +I                      IE     G+ ++ ++     WL  
Sbjct: 112 TMLVRAMKEDGVDIWGD-----------GSTYKGNDIERFYRYGLMANPSLRIYKPWLDS 160

Query: 178 YETWKLAQDIGGQDLV---NLILEES 200
               +L       + +        +S
Sbjct: 161 QFVTELGGRKEMSEWLVAHGFPYRDS 186


>gi|224586572|ref|YP_002640451.1| GMP synthase [Borrelia spielmanii A14S]
 gi|224497634|gb|ACN53256.1| GMP synthase [Borrelia spielmanii A14S]
          Length = 511

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 58/184 (31%), Gaps = 23/184 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDR-VETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +L FSGG DS  C           +  +  + G   K E        KKI+EL  +
Sbjct: 215 SKKVILGFSGGTDSLVCALLIKKAIKENLICVFVNTGLLRKNED-------KKILELNQQ 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  +      +          + L      + +   +   FV     I L          
Sbjct: 268 YDLN------IKYIDASAKFLNHLKNISDPEEKRKIIGKEFVNVFEKITL-------EDQ 314

Query: 127 GITNIVIGVCETDY--SGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            I  +  G   +D   S   +     I++      L  +  + +  PL    K E  ++ 
Sbjct: 315 NIEYLAQGTIYSDVIESKSKNNASSKIKSHHNVGGLPDKMSLKLLEPLNEFFKDEIIQIG 374

Query: 185 QDIG 188
            ++G
Sbjct: 375 INLG 378


>gi|254509508|ref|ZP_05121575.1| GMP synthase [Rhodobacteraceae bacterium KLH11]
 gi|221533219|gb|EEE36207.1| GMP synthase [Rhodobacteraceae bacterium KLH11]
          Length = 519

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 53/184 (28%), Gaps = 17/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS       +   D++  +  D+G   K E        + +      +
Sbjct: 222 KKVICGLSGGVDSSVAAILIHEAIGDQLTCVFVDHGLLRKNE------ATEVVGMFRDNY 275

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              L        A   ++    L      + +   +   F+                  G
Sbjct: 276 NIRLIH------ADESELFLGELDGQSDPETKRKIIGKLFIDVFQKHADTIEGAEFLAQG 329

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                +    +   G       TI++      L  +  + +  PL  L K E   L +++
Sbjct: 330 TLYPDVIESVSFSGGP----SVTIKSHHNVGGLPEKMGLKLIEPLRELFKDEVRALGREL 385

Query: 188 GGQD 191
           G  D
Sbjct: 386 GLPD 389


>gi|224000705|ref|XP_002290025.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975233|gb|EED93562.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 999

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/200 (12%), Positives = 49/200 (24%), Gaps = 25/200 (12%)

Query: 9   PSALLLFSGGQDSST---CLSWAL-----------DRFDRVETLSFDYGQRNKVELECRL 54
           P+ ++  SGG DS      L++             D+  R+  +  DY  R +   E   
Sbjct: 527 PTTIVSLSGGVDSMVIASALAYLRDTEAARCNLKPDKVLRIICIHIDYANRPESGAEAA- 585

Query: 55  CVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII 114
                +     +          +     G  +     +                  R   
Sbjct: 586 ----YVGRYCHQIGAQFVCRK-IDEVTRGVNARDDYERIAREIRFGLYRQYCGEARRIGG 640

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
                       G+          +       +      +    ++     VT+  PL+ 
Sbjct: 641 QESDIGI-----GVMLGHHRGDLRENVISNAHKGCGPLDLSGMTSVSKNDGVTLFRPLLP 695

Query: 175 LKKYETWKLAQDIGGQDLVN 194
           L+K   +  A   G     +
Sbjct: 696 LEKTFIFDYAHTFGVPYFKD 715


>gi|167629525|ref|YP_001680024.1| argininosuccinate synthase [Heliobacterium modesticaldum Ice1]
 gi|167592265|gb|ABZ84013.1| argininosuccinate synthase [Heliobacterium modesticaldum Ice1]
          Length = 403

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 18/171 (10%), Positives = 46/171 (26%), Gaps = 7/171 (4%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L +SGG D+S  + W  +     V  ++ D GQ  ++       ++        
Sbjct: 1   MTKKIVLAYSGGLDTSIIIPWLKENYGYEVIAMAADLGQGEELAPLNEKAIK---SGATK 57

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            + + + E+ +         +  +        +   +     +  R +         A  
Sbjct: 58  LYIEDVKEEFVTDFIW---PTLKAGAVYEGKYLLGTSFARPLIAKRLVEIARAEGAEAIA 114

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
            G T         + +         I A     ++        +     + 
Sbjct: 115 HGATGKGNDQVRFELTVKALAPDLKIVAPWREWDIRSREDAIDYANARNIP 165


>gi|163757570|ref|ZP_02164659.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Hoeflea phototrophica DFL-43]
 gi|162285072|gb|EDQ35354.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Hoeflea phototrophica DFL-43]
          Length = 523

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 53/185 (28%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DSS       +   D++  +  D+G      L         +      
Sbjct: 225 SGKVICALSGGVDSSVAALLIHEAIGDQLSCILVDHG------LMRMNEAADVVAMFREH 278

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  SL       L    D   S L      + +   +   F+                  
Sbjct: 279 YNLSL------KLVDASDRFISQLEGEADPETKRKTIGRLFIEVFEEEAKKIGGADFLAQ 332

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G     +    +   G       TI++      L    ++ +  PL  L K E   L ++
Sbjct: 333 GTLYPDVIESVSFSGGP----SVTIKSHHNVGGLPERMNMQLVEPLRELFKDEVRVLGRE 388

Query: 187 IGGQD 191
           +G  D
Sbjct: 389 LGLPD 393


>gi|163938071|ref|YP_001642955.1| tRNA(Ile)-lysidine synthetase [Bacillus weihenstephanensis KBAB4]
 gi|163860268|gb|ABY41327.1| tRNA(Ile)-lysidine synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 476

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 22/197 (11%), Positives = 53/197 (26%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D++KK  + ++  SGG DS   L + L++                          + +V 
Sbjct: 17  DVLKKHSTIVVGVSGGPDSLALLYYLLEK--------------------RAEKQLEIVVA 56

Query: 63  LMPKW--KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +      +   ED      +  ++     T  + +                     F  
Sbjct: 57  HVDHMFRGNESYEDLQFVQGLCKELGVICETLRINVSQYQQQYGMNAQVAARECRYAFLE 116

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKK 177
            +  +     + +G    D       R       +    + ++       +  PL+ + K
Sbjct: 117 RIMKKYDARYVALGHHGDDQVETILMRLVRGSTPKGYAGIAVKRSFHNGYLIRPLLGVTK 176

Query: 178 YETWKLAQDIGGQDLVN 194
            E       +     ++
Sbjct: 177 EEIVDYCNKLKVIPRID 193


>gi|114046812|ref|YP_737362.1| GMP synthase [Shewanella sp. MR-7]
 gi|123030774|sp|Q0HX50|GUAA_SHESR RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|113888254|gb|ABI42305.1| GMP synthase (glutamine-hydrolyzing) [Shewanella sp. MR-7]
          Length = 525

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 49/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS            ++  +  D G     E                +  +
Sbjct: 230 VILGLSGGVDSSVVAMLLHRAIGKKLTCVFVDNGLLRLNE--------------AKQVME 275

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+   L +  +   +            +        V              A  L   
Sbjct: 276 MFGDHFGLNIVHIDAENRFLDALKGEADPEAKRKIIGRVFVEIFDEEAKKCVNAKWLAQG 335

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S         I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 336 TIYPDVIESAGSATGKAHV--IKSHHNVGGLPDDMELGLVEPLRELFKDEVRKIGLELGL 393

Query: 190 Q 190
            
Sbjct: 394 P 394


>gi|305432442|ref|ZP_07401604.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Campylobacter coli JV20]
 gi|304444481|gb|EFM37132.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Campylobacter coli JV20]
          Length = 327

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
           AL LFSGG DS   +     +   V+ L+ + G
Sbjct: 2  KALALFSGGLDSMLAMKLITAQGIEVKALNINIG 35


>gi|198274529|ref|ZP_03207061.1| hypothetical protein BACPLE_00677 [Bacteroides plebeius DSM 17135]
 gi|198272583|gb|EDY96852.1| hypothetical protein BACPLE_00677 [Bacteroides plebeius DSM 17135]
          Length = 233

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 63/228 (27%), Gaps = 47/228 (20%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVET-LSFDYGQRNKVELECRLCVRKKIVELM 64
                 +LL+SGG DS     W +D+  + +  L  D G +   E      +   +V   
Sbjct: 4   SSYEKKVLLYSGGMDS-----WLIDKIWKPDVKLYVDMGTKYSQEEI--KRLPADVVVEK 56

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                   ED I+PL                                 +I +        
Sbjct: 57  LDLSKWEREDKIIPLRN-----------------------------MYLIGIATNYGNEI 87

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            LG T     + ++        +       +       +  + +        K E  +  
Sbjct: 88  CLGATAGDRVLDKSPVFADIYEQLLNYLYQKQHWTEERKIKINLDFKR--YTKAELVRAF 145

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
              GG   ++     S +CY  +       G  C SC  C+ +   + 
Sbjct: 146 IAQGGD--MDEAFSSSFSCYTPE------HGKECWSCKPCFRKFIAFA 185


>gi|198275614|ref|ZP_03208145.1| hypothetical protein BACPLE_01783 [Bacteroides plebeius DSM 17135]
 gi|198271243|gb|EDY95513.1| hypothetical protein BACPLE_01783 [Bacteroides plebeius DSM 17135]
          Length = 368

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 46/180 (25%), Gaps = 2/180 (1%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           KK  +   L SGG DS+  +    ++  + +      G      L C     + I     
Sbjct: 10  KKDMNVAALISGGVDSAVVVHLLCEQGHKPDLFYIKIGMDTDDGLTC--TAEEDIELASA 67

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +      HI+ L      +  + T +   +    N                 A   Y 
Sbjct: 68  TARKYGLSFHIVDLQQAYWDNVVAYTVDRVRRGLTPNPDVMCNKLIKFGCFDREAGQGYD 127

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
              T       + D   +     D ++     +       V+     +     E  +   
Sbjct: 128 KIATGHYASTLDIDGYTWLATAKDPVKDQTDFLAQIDYLQVSRLMFPLGGFLKEEVRDMA 187


>gi|184156205|ref|YP_001844545.1| hypothetical protein LAF_1729 [Lactobacillus fermentum IFO 3956]
 gi|183227549|dbj|BAG28065.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956]
          Length = 275

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 22/174 (12%), Positives = 51/174 (29%), Gaps = 6/174 (3%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRK 58
           +   + +    L+ FSGG DS+  L  AL     + V  +  +       E    + + +
Sbjct: 9   LTAALSQYNKVLVAFSGGIDSTVVLDAALKTLGKENVLAVVANSDLFTDEEYTKAMDLAQ 68

Query: 59  KIVE-LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI---I 114
           ++   ++    D L  D I             +      +++DN+  +  + G  +    
Sbjct: 69  EMGATVLGTTLDYLANDDIKNNRASSWYWMKKMFYQKMNELKDNSNCDVVLDGMIMDDKN 128

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV 168
                       G  +++              R   +       +  + S    
Sbjct: 129 DFRPGLRARDEEGAVSVLQVANIYKSDVRDMAREAGLSNWNKVASCSVSSRFEY 182


>gi|86609210|ref|YP_477972.1| argininosuccinate synthase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|119361334|sp|Q2JKS2|ASSY_SYNJB RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|86557752|gb|ABD02709.1| argininosuccinate synthase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 400

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 23/188 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCL-SWALDRFDR-VETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +A   +L +SGG D+S C+     +     V  L+ D GQ  ++E      +R     
Sbjct: 1   MGRAKKVVLAYSGGVDTSVCIPYLKHEWGVESVVALAVDLGQGAELEAIQAKALRA---- 56

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     E  ++  A+   I+  +     A  + +   P +    R +I  +     
Sbjct: 57  --------GAEQSLVREAVQALITDYAFPAIQANALYEQRYPLSTALARPLIAKLLVEV- 107

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A  +G   +  G                         L  +  V        + + ET  
Sbjct: 108 AEEVGADAVAHGCTGKGNDQVRFD--------LAIAALNPQLKVLAPAREWGMTREETIA 159

Query: 183 LAQDIGGQ 190
             +  G  
Sbjct: 160 YGERYGIP 167


>gi|73663123|ref|YP_301904.1| argininosuccinate synthase [Staphylococcus saprophyticus subsp.
          saprophyticus ATCC 15305]
 gi|119361330|sp|Q49WA0|ASSY_STAS1 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|72495638|dbj|BAE18959.1| argininosuccinate synthase [Staphylococcus saprophyticus subsp.
          saprophyticus ATCC 15305]
          Length = 401

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 17/37 (45%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
               +L +SGG D+S  + W LD+   V     D G
Sbjct: 1  MKEKIVLAYSGGLDTSVAVKWLLDKGYDVVACCLDVG 37


>gi|71274509|ref|ZP_00650797.1| PP-loop [Xylella fastidiosa Dixon]
 gi|71900338|ref|ZP_00682473.1| PP-loop [Xylella fastidiosa Ann-1]
 gi|170730758|ref|YP_001776191.1| cell cycle protein [Xylella fastidiosa M12]
 gi|71164241|gb|EAO13955.1| PP-loop [Xylella fastidiosa Dixon]
 gi|71729913|gb|EAO32009.1| PP-loop [Xylella fastidiosa Ann-1]
 gi|167965551|gb|ACA12561.1| cell cycle protein [Xylella fastidiosa M12]
          Length = 435

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 18/51 (35%), Gaps = 4/51 (7%)

Query: 11 ALLLFSGGQDSSTCLSWAL----DRFDRVETLSFDYGQRNKVELECRLCVR 57
           L+ FSGG DS+  L         R   +E +   +G     +     C  
Sbjct: 15 VLVAFSGGLDSTVLLHCLASQPTQRIHGLEAIHIHHGLNEHADAWTAHCAA 65


>gi|297837025|ref|XP_002886394.1| hypothetical protein ARALYDRAFT_893078 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297332235|gb|EFH62653.1| hypothetical protein ARALYDRAFT_893078 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 534

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 56/199 (28%), Gaps = 20/199 (10%)

Query: 1   MNDIIKKAPSAL-----------LLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKV 48
           M D++++    +              SGG DS+   +       DR+  +  D G     
Sbjct: 209 MEDLMEEEIKVINQTVASDEHVICALSGGVDSTVAATLVHKAIGDRLHCIFVDNGLLRYK 268

Query: 49  ELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFV 108
           E E  +   ++           L    +             +      KI      N F 
Sbjct: 269 EQERVMDTFER--------DLHLPVTCVDASERFLSELKGVVDPETKRKIIGKEFINIFD 320

Query: 109 PGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV 168
                +        A+ +  T     +      G       TI++      L  +  + +
Sbjct: 321 QFAQELEKKHGKKPAFLVQGTLYPDVIESCPPPGTDRTHSHTIKSHHNVGGLPKDMKLKL 380

Query: 169 HTPLMWLKKYETWKLAQDI 187
             PL  L K E  +L + +
Sbjct: 381 IEPLKLLFKDEVRELGRIL 399


>gi|296533919|ref|ZP_06896444.1| argininosuccinate synthase [Roseomonas cervicalis ATCC 49957]
 gi|296265753|gb|EFH11853.1| argininosuccinate synthase [Roseomonas cervicalis ATCC 49957]
          Length = 411

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 45/157 (28%), Gaps = 5/157 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +K     +L +SGG D+S  L W    +   V T + D GQ  ++         + +   
Sbjct: 3   VKDVKKVVLAYSGGLDTSVILKWLQTTYQCEVVTFTADLGQGEELGP--ARDKARLLG-- 58

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           + +    + +               +        +   ++    +  R I         A
Sbjct: 59  IKEENIFIDDLREEFTRDFVFPMFRANALYEGCYLLGTSIARPLISKRQIEIAEQVGADA 118

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              G T         + S Y       + A     +L
Sbjct: 119 VAHGATGKGNDQVRFELSYYSLKPDVKVIAPWREWDL 155


>gi|261403173|ref|YP_003247397.1| argininosuccinate synthase [Methanocaldococcus vulcanius M7]
 gi|261370166|gb|ACX72915.1| argininosuccinate synthase [Methanocaldococcus vulcanius M7]
          Length = 397

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 54/185 (29%), Gaps = 22/185 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               A+L +SGG D+S CL    D++  +V ++  D GQ    E++      K +  L  
Sbjct: 1   MEKIAVLAYSGGLDTSCCLKLLEDKYDYKVVSVCVDVGQ-PVEEIKEVEEKAKNLGVL-- 57

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  + + +      +                             +       +A  
Sbjct: 58  -------KHYTID---AKEEFVKDYIFRAIKANAMYEGYPLSTALARPLIAYKVVEIAKE 107

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G   +  G        +       I+A +          V      + L + E  + A+
Sbjct: 108 VGAEAVAHGCTGKGNDQFRFETTIRIKAPD--------LKVVAPIRDLNLTRVEEIEYAK 159

Query: 186 DIGGQ 190
           + G  
Sbjct: 160 EKGIP 164


>gi|254822979|ref|ZP_05227980.1| GMP synthase [Mycobacterium intracellulare ATCC 13950]
          Length = 514

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 54/184 (29%), Gaps = 11/184 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A+   SGG DS+   +       DR+  +  D+G     E E     R  +         
Sbjct: 212 AICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHG--LLREGERAQVQRDFVAATGANLVT 269

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
               D       L  ++  +  +     I  + +       R+I+    +          
Sbjct: 270 VDAAD-----TFLDALAGVTNPEGKRKIIGRHFIRAFEGAVRDIVGDNASDGSGVE---F 321

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +    +  PL  L K E   + +++G 
Sbjct: 322 LVQGTLYPDVVESGGGSGTANIKSHHNVGGLPGDLTFKLVEPLRLLFKDEVRAVGRELGL 381

Query: 190 QDLV 193
            + +
Sbjct: 382 PEEI 385


>gi|251799699|ref|YP_003014430.1| argininosuccinate synthase [Paenibacillus sp. JDR-2]
 gi|247547325|gb|ACT04344.1| argininosuccinate synthase [Paenibacillus sp. JDR-2]
          Length = 411

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVR 57
              +L +SGG D+S  L W  + +D  +   + D GQ+ +++      + 
Sbjct: 3  KEKIVLAYSGGLDTSIILKWLKETYDAEIIAFTADIGQKEELDGLEAKALA 53


>gi|242042037|ref|XP_002468413.1| hypothetical protein SORBIDRAFT_01g045520 [Sorghum bicolor]
 gi|241922267|gb|EER95411.1| hypothetical protein SORBIDRAFT_01g045520 [Sorghum bicolor]
          Length = 489

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 48/192 (25%), Gaps = 12/192 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS  L                   +         C   + ++      D
Sbjct: 79  RVAVLVSGGVDSSVALRLLHAAGHHCTAFYLKIWFQEDFRNFWSECPWDEDLKYAQAVCD 138

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +     +    L D   + +  ++  + +    PN  V     I           LG  
Sbjct: 139 KIDVPLEVV--HLSDEYWNYVVSHMINEYRCGRTPNPDVLCNTRIKFGAFLEAIENLGFD 196

Query: 130 NIVIGVCETDYSGYPDCRHDT----------IRAIETAINLGMESHVTVHTPLMWLKKYE 179
            I  G          +                       +L       +  PL  + K E
Sbjct: 197 YIASGHYAHVVHPSTENTEAPSILQLSKDKVKDQTYFLSHLSQPQLRRLLFPLGCITKDE 256

Query: 180 TWKLAQDIGGQD 191
             +LA  +G  +
Sbjct: 257 VRRLATQMGLPN 268


>gi|188589825|ref|YP_001919873.1| argininosuccinate synthase [Clostridium botulinum E3 str. Alaska
          E43]
 gi|188500106|gb|ACD53242.1| argininosuccinate synthase [Clostridium botulinum E3 str. Alaska
          E43]
          Length = 330

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 27/90 (30%), Gaps = 3/90 (3%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           AL + SGG DS        ++   V  + F          E    + ++I   +     
Sbjct: 3  KALAMISGGLDSILAAKLIKEQGIEVIGICFK---SYFFNEENAKRMTEQIGIKLEVIDF 59

Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQ 99
          S     ++     G   + +   +    + 
Sbjct: 60 SEEHFDLVRNPKHGWGKNMNPCIDCHSMMM 89


>gi|187935593|ref|YP_001884686.1| argininosuccinate synthase [Clostridium botulinum B str. Eklund
          17B]
 gi|187723746|gb|ACD24967.1| argininosuccinate synthase [Clostridium botulinum B str. Eklund
          17B]
          Length = 330

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 27/90 (30%), Gaps = 3/90 (3%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           AL + SGG DS        ++   V  + F          E    + ++I   +     
Sbjct: 3  KALAMISGGLDSILAAKLIKEQGIEVIGICFK---SYFFNEENAKRMTEQIGIKLEVIDF 59

Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQ 99
          S     ++     G   + +   +    + 
Sbjct: 60 SEEHFDLVRNPKHGWGKNMNPCIDCHSMMM 89


>gi|153853932|ref|ZP_01995265.1| hypothetical protein DORLON_01256 [Dorea longicatena DSM 13814]
 gi|149753314|gb|EDM63245.1| hypothetical protein DORLON_01256 [Dorea longicatena DSM 13814]
          Length = 471

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 45/185 (24%), Gaps = 16/185 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS            ++  +  D+G   K E +    V            
Sbjct: 174 RVLLALSGGVDSSVAAGLLSRAIGKQLTCVFVDHGLLRKDEGDEVEGV------------ 221

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G +    L  +   +       +A    +       +    I      A     +  
Sbjct: 222 --FGPNGQFDLNFIRVNAQQRYYDKLAGVT-EPEAKRKIIGEEFIRIFEEEAKKIGAVDF 278

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   SG                         +  PL  L K E  K   ++G
Sbjct: 279 LAQGTIYPDVVESGLGGESGVIKSHHNVGGLPEHVDFKDIIEPLRDLFKDEVRKAGLELG 338

Query: 189 GQDLV 193
             + +
Sbjct: 339 IPERL 343


>gi|90961287|ref|YP_535203.1| argininosuccinate synthase [Lactobacillus salivarius UCC118]
 gi|119361283|sp|Q1WV65|ASSY_LACS1 RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|90820481|gb|ABD99120.1| Argininosuccinate synthase [Lactobacillus salivarius UCC118]
          Length = 403

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 46/171 (26%), Gaps = 13/171 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +    +L +SGG D+S  ++W  ++   V     D G     E +    +++K       
Sbjct: 2   EKGKVVLAYSGGLDTSVEIAWLKNKGYDVIACCIDVG-----EGKDLEAIKEK------- 49

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +G    + +    + +   +   +       N           + +     +A   
Sbjct: 50  -GLKVGAVESIVIDAKHEFAEEYVLPALQGHAYYENKYPLVSALSRPLIVKKLVEVAKEH 108

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
           G T I  G                    E  I   +          +   K
Sbjct: 109 GATAIAHGCTGKGNDQVRFEVGIHALVPEMKIEDPIRDLHWSREEEIEYAK 159


>gi|15606397|ref|NP_213777.1| argininosuccinate synthase [Aquifex aeolicus VF5]
 gi|5915698|sp|O67213|ASSY_AQUAE RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|2983600|gb|AAC07170.1| argininosuccinate synthase [Aquifex aeolicus VF5]
          Length = 401

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE--LECRLCV 56
          K    +L +SGG D+S  + W  ++   V T + D GQ  ++    E     
Sbjct: 2  KKKRVILAYSGGLDTSIIVRWLTEKGYEVITYTADVGQGEELSEIPEKARRA 53


>gi|85714373|ref|ZP_01045361.1| tRNA(Ile)-lysidine synthase [Nitrobacter sp. Nb-311A]
 gi|85698820|gb|EAQ36689.1| tRNA(Ile)-lysidine synthase [Nitrobacter sp. Nb-311A]
          Length = 337

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 22/55 (40%), Gaps = 7/55 (12%)

Query: 7  KAPSALLL-FSGGQDSSTCLSWALD------RFDRVETLSFDYGQRNKVELECRL 54
          K   AL+L  SGG DS   +  A        R   +  ++ D+G R     E R 
Sbjct: 16 KGERALVLAVSGGPDSMALMWLAARWRSAMTRGPDLIAVTVDHGLRRGSAREARD 70


>gi|75763674|ref|ZP_00743357.1| Asparagine synthetase (glutamine-hydrolyzing) [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|74488841|gb|EAO52374.1| Asparagine synthetase (glutamine-hydrolyzing) [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 595

 Score = 44.1 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 23/60 (38%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS   S A +    + T S  + QR   E++      +K+         S  E 
Sbjct: 228 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKEF 287


>gi|319399776|gb|EFV88024.1| GMP synthase [glutamine-hydrolyzing] [Staphylococcus epidermidis
           FRI909]
          Length = 513

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 56/187 (29%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS           D++  +  D+G   K E +    V ++  E    
Sbjct: 218 NRKVLCAMSGGVDSSVVAVLLHKAIGDQLTCIFVDHGLLRKGEGDM---VMEQFGE---- 270

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G D  +      +   S L      + +   + N FV   +              
Sbjct: 271 -----GFDMNIIRVNAQERFMSKLKGVSDPERKRKIIGNEFVYVFDDEAAKLTDVDFLAQ 325

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G     +    T  +        TI++      L  +    +  P+  L K E   L  +
Sbjct: 326 GTLYTDVIESGTKTA-------QTIKSHHNVGGLPEDMEFELIEPINTLFKDEVRALGIE 378

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 379 LGIPEHL 385


>gi|282882183|ref|ZP_06290822.1| GMP synthase (glutamine-hydrolyzing) [Peptoniphilus lacrimalis
           315-B]
 gi|281297948|gb|EFA90405.1| GMP synthase (glutamine-hydrolyzing) [Peptoniphilus lacrimalis
           315-B]
          Length = 504

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 45/187 (24%), Gaps = 21/187 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS   +       + +  +  D+G   K E +      K       +
Sbjct: 210 NGKVLLALSGGVDSSVTAALVSKAIGENLTCIFVDHGLMRKNEGDEVEEAFKNSGMKFIR 269

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   + L      +     + +      ++       V       +      +   
Sbjct: 270 IDAEERFLNRLKKVTDPERKRKIIGEEFIRVFEEEGRKIKSVDYLAQGTIYPDVIESGLG 329

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G                                        +  PL  L K E  KL ++
Sbjct: 330 GAVIKSHHNVGGLPDVVDFK--------------------ELIEPLRMLFKDEVRKLGRE 369

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 370 LGLADYL 376


>gi|282874643|ref|ZP_06283525.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Staphylococcus epidermidis SK135]
 gi|281296567|gb|EFA89079.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Staphylococcus epidermidis SK135]
          Length = 513

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 56/187 (29%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS           D++  +  D+G   K E +    V ++  E    
Sbjct: 218 NRKVLCAMSGGVDSSVVAVLLHKAIGDQLTCIFVDHGLLRKGEGDM---VMEQFGE---- 270

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G D  +      +   S L      + +   + N FV   +              
Sbjct: 271 -----GFDMNIIRVNAQERFMSKLKGVSDPERKRKIIGNEFVYVFDDEAAKLTDVDFLAQ 325

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G     +    T  +        TI++      L  +    +  P+  L K E   L  +
Sbjct: 326 GTLYTDVIESGTKTA-------QTIKSHHNVGGLPEDMEFELIEPINTLFKDEVRALGIE 378

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 379 LGIPEHL 385


>gi|242243328|ref|ZP_04797773.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Staphylococcus epidermidis W23144]
 gi|293367654|ref|ZP_06614306.1| GMP synthase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|242233277|gb|EES35589.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Staphylococcus epidermidis W23144]
 gi|291318224|gb|EFE58618.1| GMP synthase [Staphylococcus epidermidis M23864:W2(grey)]
          Length = 515

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 56/187 (29%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS           D++  +  D+G   K E +    V ++  E    
Sbjct: 220 NRKVLCAMSGGVDSSVVAVLLHKAIGDQLTCIFVDHGLLRKGEGDM---VMEQFGE---- 272

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G D  +      +   S L      + +   + N FV   +              
Sbjct: 273 -----GFDMNIIRVNAQERFMSKLKGVSDPERKRKIIGNEFVYVFDDEAAKLTDVDFLAQ 327

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G     +    T  +        TI++      L  +    +  P+  L K E   L  +
Sbjct: 328 GTLYTDVIESGTKTA-------QTIKSHHNVGGLPEDMEFELIEPINTLFKDEVRALGIE 380

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 381 LGIPEHL 387


>gi|57866023|ref|YP_187668.1| GMP synthase [Staphylococcus epidermidis RP62A]
 gi|71152096|sp|Q5HRX1|GUAA_STAEQ RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|57636681|gb|AAW53469.1| GMP synthase [Staphylococcus epidermidis RP62A]
 gi|329727970|gb|EGG64417.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Staphylococcus epidermidis VCU144]
 gi|329734333|gb|EGG70647.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Staphylococcus epidermidis VCU028]
 gi|329736119|gb|EGG72392.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Staphylococcus epidermidis VCU045]
          Length = 513

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 56/187 (29%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS           D++  +  D+G   K E +    V ++  E    
Sbjct: 218 NRKVLCAMSGGVDSSVVAVLLHKAIGDQLTCIFVDHGLLRKGEGDM---VMEQFGE---- 270

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G D  +      +   S L      + +   + N FV   +              
Sbjct: 271 -----GFDMNIIRVNAQERFMSKLKGVSDPERKRKIIGNEFVYVFDDEAAKLTDVDFLAQ 325

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G     +    T  +        TI++      L  +    +  P+  L K E   L  +
Sbjct: 326 GTLYTDVIESGTKTA-------QTIKSHHNVGGLPEDMEFELIEPINTLFKDEVRALGIE 378

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 379 LGIPEHL 385


>gi|145224108|ref|YP_001134786.1| argininosuccinate synthase [Mycobacterium gilvum PYR-GCK]
 gi|315444444|ref|YP_004077323.1| argininosuccinate synthase [Mycobacterium sp. Spyr1]
 gi|189046394|sp|A4T9W4|ASSY_MYCGI RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|145216594|gb|ABP45998.1| Argininosuccinate synthase [Mycobacterium gilvum PYR-GCK]
 gi|315262747|gb|ADT99488.1| argininosuccinate synthase [Mycobacterium sp. Spyr1]
          Length = 400

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           +   +L +SGG D S        +    V  ++ D GQ  +     R     
Sbjct: 1  MSERVILAYSGGLDTSVAISWIGKETGKEVVAVAIDLGQGGEDMEVVRQRAID 53


>gi|305664584|ref|YP_003860871.1| sulfate adenylyltransferase subunit 2 [Maribacter sp. HTCC2170]
 gi|88708601|gb|EAR00837.1| sulfate adenylyltransferase subunit 2 [Maribacter sp. HTCC2170]
          Length = 299

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 66/211 (31%), Gaps = 8/211 (3%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCV 56
           M ++  +    +LLFSGG+DS T +  A   F         +  D G      +E R  +
Sbjct: 18  MREVAAQFEKPVLLFSGGKDSITLVRLAQKAFYPAKIPFPLMHIDTGHNFPETIEFRDRL 77

Query: 57  RKKIV--ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF-VPGRNI 113
            +++    ++   +DS+ +  +   +      +S  T  +   I++           R+ 
Sbjct: 78  VEELGLELIVRNVQDSIDQGKVKEESGRYSSRNSLQTTTLLDAIEEFKFDACIGGARRDE 137

Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
                   +              +             +        +   + + V +  +
Sbjct: 138 EKARAKERVFSVRDDFGQWDEKNQRPELFDMLNGQIELGQNVRVFPISNWTELDVWSY-I 196

Query: 174 WLKKYETWKLAQDIGGQDLVNLILEESHTCY 204
             ++ E   +      +  +   L  SH+ Y
Sbjct: 197 EKEEIEIPSIYFAHKRKIFLRDGLIWSHSDY 227


>gi|90424556|ref|YP_532926.1| GMP synthase [Rhodopseudomonas palustris BisB18]
 gi|122475962|sp|Q212S9|GUAA_RHOPB RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|90106570|gb|ABD88607.1| GMP synthase (glutamine-hydrolyzing) [Rhodopseudomonas palustris
           BisB18]
          Length = 535

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 57/185 (30%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DS+       +   D++  +  D+G   K E +        +V+L   
Sbjct: 237 SGKVICGLSGGVDSAVAAVLIHEAIGDQLTCVFVDHGLLRKDEGKT-------VVDLFRH 289

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +            LG++   S  +               +              A  L
Sbjct: 290 HYNIPLVHVDAAKLFLGELEGVSDPEL-------KRKTIGRLFINVFEGEAKMIGGADFL 342

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+    +      TI++      L    ++ +  PL  L K E   L ++
Sbjct: 343 AQGTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMNMQLVEPLRELFKDEVRVLGRE 400

Query: 187 IGGQD 191
           +G  +
Sbjct: 401 LGLPE 405


>gi|315927619|gb|EFV06950.1| thiamine biosynthesis protein:ExsB [Campylobacter jejuni subsp.
          jejuni DFVF1099]
          Length = 327

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
           AL LFSGG DS   +     +   V+ L+ + G
Sbjct: 2  KALALFSGGLDSMLAMKLITAQGIEVKALNINIG 35


>gi|307353027|ref|YP_003894078.1| phosphoadenosine phosphosulfate reductase [Methanoplanus
           petrolearius DSM 11571]
 gi|307156260|gb|ADN35640.1| phosphoadenosine phosphosulfate reductase [Methanoplanus
           petrolearius DSM 11571]
          Length = 517

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
           +K  P+A + FSGG+DS+  L  A       +    D G
Sbjct: 247 MKDRPTANVSFSGGKDSTVVLHLARKAGIE-DAFFIDTG 284


>gi|296129494|ref|YP_003636744.1| argininosuccinate synthase [Cellulomonas flavigena DSM 20109]
 gi|296021309|gb|ADG74545.1| argininosuccinate synthase [Cellulomonas flavigena DSM 20109]
          Length = 412

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 18/53 (33%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQDSSTC-LSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
               +L +SGG D+S      A      V  ++ D GQ  +     R     
Sbjct: 1  MTDRVVLAYSGGLDTSVGIGWIAEATGAEVIAVAVDVGQGGEDLEVIRRRALD 53


>gi|167770355|ref|ZP_02442408.1| hypothetical protein ANACOL_01698 [Anaerotruncus colihominis DSM
           17241]
 gi|167667677|gb|EDS11807.1| hypothetical protein ANACOL_01698 [Anaerotruncus colihominis DSM
           17241]
          Length = 510

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 52/189 (27%), Gaps = 24/189 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMP 65
           +   LL  SGG DSS   +        ++  +  D+G  R     E       + +  + 
Sbjct: 215 SGKVLLALSGGVDSSVAAALLSRAVGKQLTCIFVDHGLMRKNEGDEVEAAFADRDIHFVR 274

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                           LG ++     +     I +          R              
Sbjct: 275 VNAGE---------RFLGKLAGVDDPERKRKIIGEEF-------IRVFEEEAKKIGHVDY 318

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV-TVHTPLMWLKKYETWKLA 184
           L    I   V E+            I++      L        +  PL  L K ET  L 
Sbjct: 319 LAQGTIYPDVIESGAGDA-----AVIKSHHNVGGLPDYVDFKEIVEPLRLLFKDETRALG 373

Query: 185 QDIGGQDLV 193
           +++G  D +
Sbjct: 374 RELGLPDYL 382


>gi|118468824|ref|YP_888064.1| argininosuccinate synthase [Mycobacterium smegmatis str. MC2 155]
 gi|166220992|sp|A0QYS6|ASSY_MYCS2 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|118170111|gb|ABK71007.1| argininosuccinate synthase [Mycobacterium smegmatis str. MC2 155]
          Length = 399

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           +   +L +SGG D S        +    V  ++ D GQ  +     R     
Sbjct: 1  MSERVILAYSGGLDTSVAISWIGKETGKEVVAVAIDLGQGGEDMEVVRQRALD 53


>gi|62320516|dbj|BAD95081.1| hypothetical protein [Arabidopsis thaliana]
          Length = 497

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/204 (10%), Positives = 50/204 (24%), Gaps = 9/204 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +K     +L SGG DSS  L                   +   E     C  +  ++ 
Sbjct: 77  MPEKPLRVAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEGFENFWNQCPWEDDLKY 136

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-- 121
                + +     +                   +      P+     R        A   
Sbjct: 137 AKHVCEQVDVPLEVVHLTDEYWERVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAISD 196

Query: 122 -----LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
                +        +     + D S   +   D ++     ++   ++ +      +   
Sbjct: 197 MEYDYVGSGHYARVVHPPADQNDASSVLELSQDMVKDQTYFLSHLSQTQLKRLLFPLGCV 256

Query: 177 KYETWKLAQDIGGQDLVNLILEES 200
           K +  +        DL N   ++S
Sbjct: 257 KKDEVRKLAT--QFDLPNKDRKDS 278


>gi|84490240|ref|YP_448472.1| argininosuccinate synthase [Methanosphaera stadtmanae DSM 3091]
 gi|119361292|sp|Q2NEC4|ASSY_METST RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|84373559|gb|ABC57829.1| ArgG [Methanosphaera stadtmanae DSM 3091]
          Length = 392

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 46/194 (23%), Gaps = 29/194 (14%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L FSGG D+S C+    +++   V T   D GQ  + E++      +KI       
Sbjct: 2   EKVVLAFSGGLDTSVCVKLLQEKYNMEVITACVDVGQ-PEDEIKKPEAAAQKIGSDKH-- 58

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                                  T +   +                     +   A  L 
Sbjct: 59  ----------------------YTIDAKDEFAKEYAFRCIKTNSLYEGYPLSTAYARPLI 96

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM---WLKKYETWKLA 184
              IV    + + S                               +    L + E    A
Sbjct: 97  AKKIVEIAKKENASTIAHGCTGKGNDQFRFEATIRSESDLDIVAPVRDYNLTRTEEQDYA 156

Query: 185 QDIGGQDLVNLILE 198
           ++ G       I  
Sbjct: 157 REHGIPLPSEKIYS 170


>gi|260062005|ref|YP_003195085.1| asparagine synthetase B [Robiginitalea biformata HTCC2501]
 gi|88783567|gb|EAR14738.1| asparagine synthetase B [Robiginitalea biformata HTCC2501]
          Length = 556

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 49/196 (25%), Gaps = 14/196 (7%)

Query: 13  LLFSGGQDSSTCLSWALDR-------FDRVET----LS-FDYGQRNKVELECRLCVRKKI 60
           +L SGG DSS   + A           D+ +     L  F  G     +L     V   I
Sbjct: 232 VLLSGGLDSSVTSAIAKKYAQKRVESGDQADAWWPQLHSFSVGLEGSPDLAAARKVADHI 291

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  + K ++ E       ++  +    +T   A       L    +    I  ++   
Sbjct: 292 GTVHHEIKFTIQEGLDAVRDVIYHLETYDITTVRASTPM--YLMARVIKSMGIKMVLSGE 349

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
                 G                   R      +   +              +     E 
Sbjct: 350 GADELFGGYLYFHKAPGPRDFHEETVRKLDKLHMYDCLRANKSLAAWGIEGRVPFLDKEF 409

Query: 181 WKLAQDIGGQDLVNLI 196
             +A  +  +D +   
Sbjct: 410 MDVAMRLNPRDKMITP 425


>gi|119775492|ref|YP_928232.1| GMP synthase [Shewanella amazonensis SB2B]
 gi|226739725|sp|A1S856|GUAA_SHEAM RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|119767992|gb|ABM00563.1| GMP synthase (glutamine-hydrolyzing) [Shewanella amazonensis SB2B]
          Length = 525

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 55/181 (30%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS           +R+  +  D G    + L     V +   +       
Sbjct: 230 VILGLSGGVDSSVTAMLLHRAIGERLTCVFVDNG---LLRLNEAKQVLEMFGDHFGLNIV 286

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +  ++    A+ G+    +  K +     +                      A  L   
Sbjct: 287 HVDAENRFLEALKGENDPEAKRKIIGRVFVEIFDEE-----------ASKCVNAKWLAQG 335

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S         I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 336 TIYPDVIESAGSATGKAHV--IKSHHNVGGLPDDMELGLVEPLRELFKDEVRKIGLELGL 393

Query: 190 Q 190
            
Sbjct: 394 P 394


>gi|332670178|ref|YP_004453186.1| argininosuccinate synthase [Cellulomonas fimi ATCC 484]
 gi|332339216|gb|AEE45799.1| argininosuccinate synthase [Cellulomonas fimi ATCC 484]
          Length = 413

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 18/53 (33%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQDSSTC-LSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
               +L +SGG D+S      A      V  ++ D GQ  +     R     
Sbjct: 1  MTERVVLAYSGGLDTSVGIGWIAEATGAEVIAVAVDVGQGGEDLEVIRRRALD 53


>gi|294784941|ref|ZP_06750229.1| GMP synthase [Fusobacterium sp. 3_1_27]
 gi|294486655|gb|EFG34017.1| GMP synthase [Fusobacterium sp. 3_1_27]
          Length = 512

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 55/187 (29%), Gaps = 18/187 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +        ++  +  D G   K E        K+++E+  K
Sbjct: 215 NKKVILGLSGGVDSSVAATLINKAIGKQLTCIFVDTGLLRKDE-------AKQVMEVYAK 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D   +        L  ++           I D       +    +      A      
Sbjct: 268 NFDMNIKCINAEERFLTKLAG----------ITDPETKRKIIGKEFVEVFNEEAKRIEGA 317

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                     +   S        TI++      L  +    +  PL  L K E  K+ ++
Sbjct: 318 KFLAQGTIYPDVIESVSVKGPSVTIKSHHNVGGLPEDLKFELLEPLRELFKDEVRKVGRE 377

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 378 LGIPDYM 384


>gi|255021404|ref|ZP_05293452.1| GMP synthase (glutamine-hydrolyzing) [Acidithiobacillus caldus ATCC
           51756]
 gi|254969267|gb|EET26781.1| GMP synthase (glutamine-hydrolyzing) [Acidithiobacillus caldus ATCC
           51756]
          Length = 513

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 54/185 (29%), Gaps = 18/185 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+           +++  +  D G     E+E    V ++         
Sbjct: 218 RVISALSGGVDSAVASILVHRAVGEQLHCIFVDNGLLRFGEVEQVSQVFRQY-------- 269

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 H++           +L      + +   + N F+   +              G 
Sbjct: 270 -FHIPLHVVD---ARARFLDALAGVTDPERKRKIIGNLFIEVFDEEAKALGGADFLVQG- 324

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   S        TI++      L     + +  PL  L K E  +L +++G
Sbjct: 325 ----TLYPDVIESVSFKGPSATIKSHHNVGGLPERMRLQLVEPLRELFKDEVRELGRELG 380

Query: 189 GQDLV 193
             + +
Sbjct: 381 MPEEI 385


>gi|255932933|ref|XP_002557937.1| Pc12g11190 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211582556|emb|CAP80746.1| Pc12g11190 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 416

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 3/59 (5%)

Query: 12 LLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + L +SGG D+S  L + ++    V     D GQ  + + E       KI  L  +  D
Sbjct: 6  VCLAYSGGLDTSCILKYLIEEGYEVVCFMADVGQ--EEDFEAAREKALKIGALKCEIID 62


>gi|222480998|ref|YP_002567235.1| GMP synthase, large subunit [Halorubrum lacusprofundi ATCC 49239]
 gi|254799663|sp|B9LTX1|GUAAB_HALLT RecName: Full=GMP synthase [glutamine-hydrolyzing] subunit B;
           AltName: Full=GMP synthetase
 gi|222453900|gb|ACM58165.1| GMP synthase, large subunit [Halorubrum lacusprofundi ATCC 49239]
          Length = 305

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 57/185 (30%), Gaps = 28/185 (15%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A++  SGG DSS   + A +   D++  +  D G   K E E                  
Sbjct: 24  AVIALSGGVDSSVAATLAYEAVGDQLTPVYVDTGLMRKGETEEIRE-------------- 69

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     + +  +      +    ++     P          F+    T+A  +G  
Sbjct: 70  --------TFSFMESLRVIEAQERFFDRLAGVTDPEEKRHVIGEGFIDEFETVANDVGAD 121

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-VHTPLMWLKKYETWKLAQDIG 188
            +V                  I++      L        +  P+  L K E  ++A+ +G
Sbjct: 122 YLVQ----GTIYPDRIESEGNIKSHHNVGGLPDIVDFEGIVEPVRDLYKDEVREVARALG 177

Query: 189 GQDLV 193
            ++++
Sbjct: 178 LEEVI 182


>gi|144898006|emb|CAM74870.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Magnetospirillum gryphiswaldense MSR-1]
          Length = 517

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 58/185 (31%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS   +   +   D++  +  D+G     E E      + +     +
Sbjct: 218 KGKVICGLSGGVDSSVVAALIHEAIGDQLTCVYVDHGLMRLGESE------QVVSVFRDR 271

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  +L        + L     + +T     +     L                   A  L
Sbjct: 272 FNINLVHK---DASDLFLGRLAGMTDPEQKRKTIGGLFIDVFE-----EEAKRIGGADFL 323

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+    +      TI++      L    ++ +  PL  L K E  +L ++
Sbjct: 324 AQGTLYPDVIESV--SFIGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRELGRE 381

Query: 187 IGGQD 191
           +G  D
Sbjct: 382 LGLPD 386


>gi|332158136|ref|YP_004423415.1| argininosuccinate synthase [Pyrococcus sp. NA2]
 gi|331033599|gb|AEC51411.1| argininosuccinate synthase [Pyrococcus sp. NA2]
          Length = 393

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 3/57 (5%)

Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
            +L +SGG D+S  L    ++    V T++ D GQ+   + +       K+  +  
Sbjct: 2  KVVLAYSGGLDTSVILKLMQEKLNAEVITVTVDVGQK--DDFKKIEEKALKLGAVKH 56


>gi|313672706|ref|YP_004050817.1| argininosuccinate synthase [Calditerrivibrio nitroreducens DSM
          19672]
 gi|312939462|gb|ADR18654.1| argininosuccinate synthase [Calditerrivibrio nitroreducens DSM
          19672]
          Length = 410

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 28/93 (30%), Gaps = 1/93 (1%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK- 66
              +L +SGG D+S  L W   +   V     D GQR+  +       +    E     
Sbjct: 3  REKVVLAYSGGLDTSVILKWLDLKGYDVVAYVADLGQRDDFKAIEEKAYKSGAKEFYVVD 62

Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ 99
           KD    D +        +         ++   
Sbjct: 63 LKDYFVRDFVFTAIKFNAMYEGRYLMGTSLARP 95


>gi|307705917|ref|ZP_07642755.1| tRNA(Ile)-lysidine synthase [Streptococcus mitis SK597]
 gi|307620578|gb|EFN99676.1| tRNA(Ile)-lysidine synthase [Streptococcus mitis SK597]
          Length = 425

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 46/173 (26%), Gaps = 11/173 (6%)

Query: 6   KKAPSALLLFSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKI 60
           KK    +L  SGG DS        ++  +    +     ++ QR +    E  L      
Sbjct: 17  KKHTKVVLALSGGLDSMFLFKVLSTYQKELEIELILAHVNHKQRVESDWEEKELRKLAAE 76

Query: 61  VELMPKWKDSLGED-----HILPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            EL     D  GE               ++   +  T  V     D+ +    +      
Sbjct: 77  AELPIYISDFSGEFSEARARHFRYDFFQEVMKKTGATALVTAHHADDQVETILMRLIRGT 136

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
            L + + +  +  +  I I      +                  N    + + 
Sbjct: 137 RLRYLSGIKEKQVVGVIEIIRPFLHFQKKDFPPIFHFEDTSNKKNHYFRNRIR 189


>gi|254760114|ref|ZP_05212138.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
           str. Australia 94]
          Length = 545

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 23/60 (38%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS   S A +    + T S  + QR   E++      +K+         S  E 
Sbjct: 175 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKEF 234


>gi|229029968|ref|ZP_04186035.1| Asparagine synthetase [Bacillus cereus AH1271]
 gi|228731352|gb|EEL82267.1| Asparagine synthetase [Bacillus cereus AH1271]
          Length = 633

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 23/60 (38%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS   S A +    + T S  + QR   E++      +K+         S  E 
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSIGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKEF 322


>gi|228939384|ref|ZP_04101974.1| Asparagine synthetase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228972263|ref|ZP_04132876.1| Asparagine synthetase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228978877|ref|ZP_04139244.1| Asparagine synthetase [Bacillus thuringiensis Bt407]
 gi|229172946|ref|ZP_04300498.1| Asparagine synthetase [Bacillus cereus MM3]
 gi|228610466|gb|EEK67736.1| Asparagine synthetase [Bacillus cereus MM3]
 gi|228780834|gb|EEM29045.1| Asparagine synthetase [Bacillus thuringiensis Bt407]
 gi|228787447|gb|EEM35413.1| Asparagine synthetase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228820279|gb|EEM66314.1| Asparagine synthetase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|326939955|gb|AEA15851.1| asparagine synthetase (glutamine-hydrolyzing) [Bacillus
           thuringiensis serovar chinensis CT-43]
          Length = 633

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 23/60 (38%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS   S A +    + T S  + QR   E++      +K+         S  E 
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSIGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKEF 322


>gi|20094378|ref|NP_614225.1| argininosuccinate synthase [Methanopyrus kandleri AV19]
 gi|24211501|sp|Q8TWU0|ASSY_METKA RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|19887449|gb|AAM02155.1| Argininosuccinate synthase [Methanopyrus kandleri AV19]
          Length = 394

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 54/194 (27%), Gaps = 23/194 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             +L +SGG D+S C+    +R  +D V T++ D GQ  +   E      +K+ +     
Sbjct: 3   RVVLAYSGGLDTSVCIELLRERYGYDEVITVTADVGQPEEELREAEEK-ARKLAD----- 56

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                E   +         +           +   L            L         L 
Sbjct: 57  -----EHFTVDCVDEFVCEYCWRAVKANATYEGYPLST---------ALARPLIAQKVLE 102

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +   V                    +     + G E  +      + L + E    A++ 
Sbjct: 103 VARDVDADAVAHGCTGKGNDQFRFESYLR-AHGGEEFEIVAPVRDLNLTRDEEIAYAEER 161

Query: 188 GGQDLVNLILEESH 201
           G    V++    S 
Sbjct: 162 GIPVPVDVDSPYSV 175


>gi|328958127|ref|YP_004375513.1| GMP synthase [Carnobacterium sp. 17-4]
 gi|328674451|gb|AEB30497.1| GMP synthase [Carnobacterium sp. 17-4]
          Length = 516

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 54/187 (28%), Gaps = 20/187 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V + +V      
Sbjct: 222 KKVLLGLSGGVDSSVVGVLLQKAIGDQLTCIFVDHGLLRKGE---SEQVMESLVGKFGLN 278

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G                 +      + G   ++L          G
Sbjct: 279 IIRVDAKERFMAKLAG---------------VSDPETKRKIIGNEFVYLFDDEAT-KLEG 322

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E  +L   +
Sbjct: 323 VDFLAQGTLYTDVIESGTDTAQTIKSHHNVGGLPDDMQFKLIEPLNTLFKDEVRELGIQL 382

Query: 188 GGQDLVN 194
           G  + + 
Sbjct: 383 GMPESLI 389


>gi|325285735|ref|YP_004261525.1| Argininosuccinate synthase [Cellulophaga lytica DSM 7489]
 gi|324321189|gb|ADY28654.1| Argininosuccinate synthase [Cellulophaga lytica DSM 7489]
          Length = 394

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 1/54 (1%)

Query: 10 SALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
            +L +SGG D S      + D+   V  +S + G   K E+        ++  
Sbjct: 3  KLVLAYSGGLDTSYCAKYLSKDKGFEVHAVSVNTGGFTKQEISNIKKKAIELGA 56


>gi|312130969|ref|YP_003998309.1| argininosuccinate synthase [Leadbetterella byssophila DSM 17132]
 gi|311907515|gb|ADQ17956.1| Argininosuccinate synthase [Leadbetterella byssophila DSM 17132]
          Length = 400

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 22/75 (29%), Gaps = 1/75 (1%)

Query: 9  PSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             +L FSGG D S        D+   V ++  D G     E+         +       
Sbjct: 2  KKVVLAFSGGLDTSFCVKYLKDDKGMEVHSVLVDTGGFTDEEVADIEKKAYDLGVKTHYT 61

Query: 68 KDSLGEDHILPLAIL 82
               + +   +  L
Sbjct: 62 ARVADKYYKDCIRFL 76


>gi|291618401|ref|YP_003521143.1| GuaA [Pantoea ananatis LMG 20103]
 gi|291153431|gb|ADD78015.1| GuaA [Pantoea ananatis LMG 20103]
 gi|327394793|dbj|BAK12215.1| GMP synthase [glutamine-hydrolyzing] GuaA [Pantoea ananatis
           AJ13355]
          Length = 526

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 50/184 (27%), Gaps = 17/184 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS             +  +  D G    + L     V     +    
Sbjct: 228 NDKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVLDMFGDHFGL 284

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +  +     A+ G+    +  K +     +                  A  L    
Sbjct: 285 NIVHVDGEARFLDALAGENDPEAKRKIIGRVFVEVFDE-------------QALRLEDVK 331

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +    I     + +     +   I++      L  E  + +  PL  L K E  K+  +
Sbjct: 332 WLAQGTIYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLRELFKDEVRKIGLE 391

Query: 187 IGGQ 190
           +G  
Sbjct: 392 LGLP 395


>gi|145336613|ref|NP_175542.2| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Arabidopsis thaliana]
 gi|332194528|gb|AEE32649.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Arabidopsis thaliana]
          Length = 497

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 14/118 (11%), Positives = 26/118 (22%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +K     +L SGG DSS  L                   +   E     C  +  ++ 
Sbjct: 77  MPEKPLRVAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEGFENFWNQCPWEDDLKY 136

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                + +     +                   +      P+     R        A 
Sbjct: 137 AKHVCEQVDVPLEVVHLTDEYWERVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAI 194


>gi|118443998|ref|YP_877128.1| cell cycle protein MesJ [Clostridium novyi NT]
 gi|118134454|gb|ABK61498.1| Cell cycle protein MesJ, putative [Clostridium novyi NT]
          Length = 464

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/181 (12%), Positives = 50/181 (27%), Gaps = 8/181 (4%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVR 57
           N++ +     ++  SGG DS   L       D     +     +    + +  E      
Sbjct: 12  NNMFEVNDKVVVALSGGPDSICLLHILHTLKDEINISIVAAHVN----HCLRGEAADNDE 67

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
             + ++  +              I  +   S       ++ Q        + G  I    
Sbjct: 68  MYVKKICEELGIQCFVKREDVHRISKERGISCEMAGREVRYQFFEEVLHKINGNKIAIAH 127

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
            A   A  + +  +     E      P   +  +R I       +E++  ++     + K
Sbjct: 128 NANDQAETVLMRILRGTGLEGLVGIRPVRDNIFVRPIINLTRDEIENYCDINKLNPRIDK 187

Query: 178 Y 178
            
Sbjct: 188 T 188


>gi|42781344|ref|NP_978591.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus ATCC
           10987]
 gi|42737266|gb|AAS41199.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus ATCC
           10987]
          Length = 605

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 23/60 (38%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS   S A +    + T S  + QR   E++      +K+         S  E 
Sbjct: 235 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKEF 294


>gi|15669670|ref|NP_248483.1| hypothetical protein MJ_1478 [Methanocaldococcus jannaschii DSM
           2661]
 gi|2501588|sp|Q58873|Y1478_METJA RecName: Full=CTU1/ATPBD3 family protein MJ1478
 gi|1592117|gb|AAB99482.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 303

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 26/88 (29%), Gaps = 8/88 (9%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
             ++ K    L+  SGG+D              +E    + G              K + 
Sbjct: 45  YKMLSKDEKILVAVSGGKDGHAAAWVLKKLGYNIELFHINLGI-----EGFSEESLKAVK 99

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSS 89
           EL  K +      H++ L  +   +   
Sbjct: 100 ELAEKLE---VPLHVVNLKDITGKTMED 124


>gi|310800805|gb|EFQ35698.1| GMP synthase domain-containing protein [Glomerella graminicola
           M1.001]
          Length = 573

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 58/211 (27%), Gaps = 29/211 (13%)

Query: 1   MNDIIKKA---------PSALLL--FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKV 48
           M+D IKK            A ++   SGG DS+       +   DR   +  D G     
Sbjct: 228 MSDFIKKEIVRIRHLVGDRAQVIGAVSGGVDSTVAAKLMKEAIGDRFHAILVDNGVMRLN 287

Query: 49  ELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFV 108
           E E      +K                ++  A L       +T+    +         F+
Sbjct: 288 ECEQVKETLQK---------HLGINLTVVDGAELFLGRLKGVTEPEKKRKIIGGT---FI 335

Query: 109 PGRNIIFLVFAATLAYRLGITNIVIGVCETDY-----SGYPDCRHDTIRAIETAINLGME 163
                  L              +   +  T Y     S        TI+       L   
Sbjct: 336 DLFEKEALRIEKEAENTPNAGAVEWFLQGTLYPDVIESLSFKGPSATIKTHHNVGGLPDT 395

Query: 164 SHVTVHTPLMWLKKYETWKLAQDIGGQDLVN 194
             + +  PL  L K E     +++G  D + 
Sbjct: 396 LKLKLIEPLRELFKDEVRSFGRELGIHDDLI 426


>gi|281354848|ref|ZP_06241342.1| GMP synthase, large subunit [Victivallis vadensis ATCC BAA-548]
 gi|281317728|gb|EFB01748.1| GMP synthase, large subunit [Victivallis vadensis ATCC BAA-548]
          Length = 479

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 20/51 (39%), Gaps = 1/51 (1%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
             +L  SGG DSS   +        ++  +  ++G   K E E    +  +
Sbjct: 184 KVVLGLSGGVDSSVVAALIHKAIGKQLTCVFVNHGLLRKNEPEMVQEIFAR 234


>gi|261379871|ref|ZP_05984444.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria subflava NJ9703]
 gi|284797568|gb|EFC52915.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria subflava NJ9703]
          Length = 367

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/180 (12%), Positives = 45/180 (25%), Gaps = 10/180 (5%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++  SGG DSS   +    +  ++  +     + +  +  C +       +       + 
Sbjct: 11  IVGLSGGVDSSVTAALLKQQGHQISGVFMQNWEDDDNDEYCSIKQ-----DSFDAIAVAD 65

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
                + +         ++      +      PN  +     I        A   G   I
Sbjct: 66  IIGIDIDIVNFAAQYKDNVFAYFLKEYSAGRTPNPDILCNAEIKFKCFLDYAIEQGADTI 125

Query: 132 VIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
             G                              L          PL  L+K E  +LA++
Sbjct: 126 ATGHYARKEVRNGVHYLLKGLDQNKDQSYFLYRLKPFQLERSIFPLGELEKPEVRRLAEE 185


>gi|168213880|ref|ZP_02639505.1| argininosuccinate synthase [Clostridium perfringens CPE str. F4969]
 gi|170714622|gb|EDT26804.1| argininosuccinate synthase [Clostridium perfringens CPE str. F4969]
          Length = 403

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 46/158 (29%), Gaps = 9/158 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +KK    +L +SGG D+S  + W  +     V  +  + GQ +++       ++    ++
Sbjct: 1   MKKFNKVILAYSGGLDTSIIIPWLKENYGCEVIAVVGNVGQSDELVGLKEKAIKTGASKI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     ED+I P    G              +   +     +  R +         
Sbjct: 61  YIEDLTKEFVEDYIFPTIQAGAKYEG-------KYLLGTSFARPIIAKRLVEIAKLEDAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         + +         I A      +
Sbjct: 114 AICHGCTGKGNDQVRFELAIKTFNPEMQIIAPWRTWEI 151


>gi|89054712|ref|YP_510163.1| GMP synthase [Jannaschia sp. CCS1]
 gi|88864261|gb|ABD55138.1| GMP synthase (glutamine-hydrolyzing) [Jannaschia sp. CCS1]
          Length = 535

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
             +   SGG DSS   +   +   D++  +  D+G
Sbjct: 239 KVICALSGGVDSSVTAALLHEAIGDQLTCVFVDHG 273


>gi|317477255|ref|ZP_07936492.1| asparagine synthase [Bacteroides eggerthii 1_2_48FAA]
 gi|316906567|gb|EFV28284.1| asparagine synthase [Bacteroides eggerthii 1_2_48FAA]
          Length = 576

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 45/187 (24%), Gaps = 14/187 (7%)

Query: 13  LLFSGGQDSSTCLSWALD-RFDRVET----------LS-FDYGQRNKVELECRLCVRKKI 60
           +L SGG DSS   + A      R+ET          L  F  G +   +L     V + I
Sbjct: 252 VLLSGGLDSSVISAIAKKYAGKRIETDNKSDAWWPRLHSFAVGLKGAPDLLKAREVAQHI 311

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  +      ++ +  L  +     +     V        L          + L    
Sbjct: 312 GTVHHEIN-YTVQEGLDALRDVIYFIETYDVTTVRASTPMYLLARVIKSMGIKMVLSGEG 370

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
                 G                   R  +   +   +              +     E 
Sbjct: 371 AD-EVFGGYLYFHKAPTPQAFHEETVRKLSKLYLYDCLRANKSLSAWGVEGRVPFLDKEF 429

Query: 181 WKLAQDI 187
             +A  +
Sbjct: 430 LDVAMRL 436


>gi|312796277|ref|YP_004029199.1| GMP synthase [glutamine-hydrolyzing] [Burkholderia rhizoxinica HKI
           454]
 gi|312168052|emb|CBW75055.1| GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) [Burkholderia
           rhizoxinica HKI 454]
          Length = 527

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 53/184 (28%), Gaps = 17/184 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +       D++  +  D+G    + L     V +     +  
Sbjct: 222 NERVILGLSGGVDSSVAAALLHRAIGDQLTCVFVDHG---LLRLNEAEQVMETFGRHLGV 278

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +         + G        K +  +  +                    T A  L
Sbjct: 279 KVIHVDASDAFMSKLAGVTDPEHKRKIIGAEFVEVFQNE-----------ARKLTDAKWL 327

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+   G       TI++      L    ++ +  PL  L K E  +L   
Sbjct: 328 AQGTIYPDVIESAGKGKK--GAHTIKSHHNVGGLPETLNLKLLEPLRELFKDEVRELGVK 385

Query: 187 IGGQ 190
           +G  
Sbjct: 386 LGLP 389


>gi|307594357|ref|YP_003900674.1| argininosuccinate synthase [Vulcanisaeta distributa DSM 14429]
 gi|307549558|gb|ADN49623.1| argininosuccinate synthase [Vulcanisaeta distributa DSM 14429]
          Length = 410

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 55/187 (29%), Gaps = 24/187 (12%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +K     L +SGG D++  + W  ++F   V T++ D GQ +                  
Sbjct: 15  RKPSKIALAYSGGLDTTVAIHWLREKFNAEVITVTVDVGQDDDFRDIEERA--------- 65

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             +K    + + +           ++         ++  P      R +I        A 
Sbjct: 66  --YKAGAIKHYTIDAKRDFAEGPVAMAIMANALY-EDRYPLGTALARPLIAEKVVEV-AK 121

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW-LKKYETWKL 183
           R G   I  G              +       A+       + +    +W + + E  + 
Sbjct: 122 REGCDAIAHGSTSKG---------NDQVRFNEALMALAPDLMIIEPAKIWGMNRAEEVEY 172

Query: 184 AQDIGGQ 190
           A+  G  
Sbjct: 173 ARKHGIP 179


>gi|297520901|ref|ZP_06939287.1| argininosuccinate synthase [Escherichia coli OP50]
          Length = 253

 Score = 44.1 bits (102), Expect = 0.017,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 21/55 (38%)

Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 2  FSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 56


>gi|332879744|ref|ZP_08447434.1| tRNA(Ile)-lysidine synthetase [Capnocytophaga sp. oral taxon 329
          str. F0087]
 gi|332682263|gb|EGJ55170.1| tRNA(Ile)-lysidine synthetase [Capnocytophaga sp. oral taxon 329
          str. F0087]
          Length = 434

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 12/39 (30%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR 45
          K    L+  SGG DS             V     ++  R
Sbjct: 10 KHQRVLVAISGGIDSVVLAHLLYSHGAEVILAHCNFSLR 48


>gi|326381906|ref|ZP_08203599.1| GMP synthase [Gordonia neofelifaecis NRRL B-59395]
 gi|326199332|gb|EGD56513.1| GMP synthase [Gordonia neofelifaecis NRRL B-59395]
          Length = 527

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 55/184 (29%), Gaps = 11/184 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A+   SGG DS+   +       DR+  +  D+G     E E          ++   +  
Sbjct: 225 AICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGERE----------QVQTDFVA 274

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           + G   +   A    + H     +   K +             +  ++     A +    
Sbjct: 275 ATGARLVTVDAEDVFLGHLDGVSDPETKRKIIGREFIRSFEGAVSEVLGDQAAAGKKVDF 334

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +    +  PL  L K E   + +++G 
Sbjct: 335 LVQGTLYPDVVESGGGSGTANIKSHHNVGGLPEDLEFKLVEPLRLLFKDEVRAVGRELGL 394

Query: 190 QDLV 193
            + +
Sbjct: 395 PEEI 398


>gi|307299195|ref|ZP_07578996.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306914991|gb|EFN45377.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 357

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 55/214 (25%), Gaps = 18/214 (8%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           ++       +  SGG DS+   +  + + + V          + + LE          + 
Sbjct: 2   VMVMEMKIGIALSGGVDSAVAAARLIRQGNDVI-------GYHMIVLEGNPLANAAADDA 54

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                    E  I+ L        +  T +          PN  V   + I         
Sbjct: 55  KAVADHLGIELKIVDLREEFRRILNYFTTS----YMSGETPNPCVVCNDSIKFGLLLERM 110

Query: 124 YRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
           +  G   I  G      S   +                   +G      +  PL  + K 
Sbjct: 111 FSFGEEKIATGHYARLVSLDENVFLARALDRAKDQSYFLSRIGKHKLHDILFPLGEMTKE 170

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRY 212
           E  + A  I          +E   C++   D R 
Sbjct: 171 EVRQEASGIDLPVHSKKDSQEI--CFIPDGDYRS 202


>gi|296164555|ref|ZP_06847126.1| argininosuccinate synthase [Mycobacterium parascrofulaceum ATCC
          BAA-614]
 gi|295900155|gb|EFG79590.1| argininosuccinate synthase [Mycobacterium parascrofulaceum ATCC
          BAA-614]
          Length = 399

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           +   +L +SGG D S        +    V  ++ D GQ  +     R     
Sbjct: 1  MSDRVILAYSGGLDTSVAISWIGKETGREVVAVAIDLGQGGEDMEVVRQRALD 53


>gi|254820435|ref|ZP_05225436.1| argininosuccinate synthase [Mycobacterium intracellulare ATCC
          13950]
          Length = 405

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           +   +L +SGG D S        +    V  ++ D GQ  +     R     
Sbjct: 1  MSERVILAYSGGLDTSVAISWIGKETGREVVAVAIDLGQGGEDMEVIRQRALD 53


>gi|229492732|ref|ZP_04386533.1| argininosuccinate synthase [Rhodococcus erythropolis SK121]
 gi|229320391|gb|EEN86211.1| argininosuccinate synthase [Rhodococcus erythropolis SK121]
          Length = 399

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 18/53 (33%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           A   +L +SGG D S        +    V  ++ D GQ  +     R     
Sbjct: 1  MADRVVLAYSGGLDTSVAISWIGKETGAEVVAVAIDLGQGGEDMEVVRQRAID 53


>gi|226354886|ref|YP_002784626.1| argininosuccinate synthase [Deinococcus deserti VCD115]
 gi|259585353|sp|C1CXR6|ASSY_DEIDV RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|226316876|gb|ACO44872.1| putative Argininosuccinate synthase (Citrulline--aspartate
          ligase) [Deinococcus deserti VCD115]
          Length = 408

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 2/74 (2%)

Query: 8  APSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCV-RKKIVELMP 65
              +L +SGG D+S  L W   +R   V   + D GQ ++VE      +    +     
Sbjct: 3  KDKIVLAYSGGLDTSIILKWLQTERNYDVVCFTADLGQGDEVEEARVKALNTGAVAAYAL 62

Query: 66 KWKDSLGEDHILPL 79
            ++    D++ P+
Sbjct: 63 DLREEFVRDYVFPM 76


>gi|226306765|ref|YP_002766725.1| argininosuccinate synthase [Rhodococcus erythropolis PR4]
 gi|259585367|sp|C1A051|ASSY_RHOE4 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|226185882|dbj|BAH33986.1| argininosuccinate synthase [Rhodococcus erythropolis PR4]
          Length = 399

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 18/53 (33%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           A   +L +SGG D S        +    V  ++ D GQ  +     R     
Sbjct: 1  MADRVVLAYSGGLDTSVAISWIGKETGAEVVAVAIDLGQGGEDMEVVRQRAID 53


>gi|183601736|ref|ZP_02963106.1| argininosuccinate synthase [Bifidobacterium animalis subsp.
          lactis HN019]
 gi|219683732|ref|YP_002470115.1| argininosuccinate synthase [Bifidobacterium animalis subsp.
          lactis AD011]
 gi|241190766|ref|YP_002968160.1| argininosuccinate synthase [Bifidobacterium animalis subsp.
          lactis Bl-04]
 gi|241196172|ref|YP_002969727.1| argininosuccinate synthase [Bifidobacterium animalis subsp.
          lactis DSM 10140]
 gi|183219342|gb|EDT89983.1| argininosuccinate synthase [Bifidobacterium animalis subsp.
          lactis HN019]
 gi|219621382|gb|ACL29539.1| argininosuccinate synthase [Bifidobacterium animalis subsp.
          lactis AD011]
 gi|240249158|gb|ACS46098.1| argininosuccinate synthase [Bifidobacterium animalis subsp.
          lactis Bl-04]
 gi|240250726|gb|ACS47665.1| argininosuccinate synthase [Bifidobacterium animalis subsp.
          lactis DSM 10140]
 gi|289178502|gb|ADC85748.1| Argininosuccinate synthase [Bifidobacterium animalis subsp.
          lactis BB-12]
 gi|295793755|gb|ADG33290.1| argininosuccinate synthase [Bifidobacterium animalis subsp.
          lactis V9]
          Length = 412

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 1/53 (1%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCV 56
          +      +L +SGG D+S  + +  DR    V  +S D GQ  +     +   
Sbjct: 1  MSDKNRIVLAYSGGLDTSVAIPYLKDRTGKDVVAVSLDVGQGGESLETIKERA 53


>gi|118465513|ref|YP_882296.1| argininosuccinate synthase [Mycobacterium avium 104]
 gi|254775563|ref|ZP_05217079.1| argininosuccinate synthase [Mycobacterium avium subsp. avium ATCC
          25291]
 gi|166220990|sp|A0QHA8|ASSY_MYCA1 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|118166800|gb|ABK67697.1| argininosuccinate synthase [Mycobacterium avium 104]
          Length = 398

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           +   +L +SGG D S        +    V  ++ D GQ  +     R     
Sbjct: 1  MSERVILAYSGGLDTSVAISWIGKETGREVVAVAIDLGQGGEDMEVIRQRALD 53


>gi|41407465|ref|NP_960301.1| argininosuccinate synthase [Mycobacterium avium subsp.
          paratuberculosis K-10]
 gi|47605393|sp|P61525|ASSY_MYCPA RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|41395817|gb|AAS03684.1| ArgG [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 398

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           +   +L +SGG D S        +    V  ++ D GQ  +     R     
Sbjct: 1  MSERVILAYSGGLDTSVAISWIGKETGREVVAVAIDLGQGGEDMEVIRQRALD 53


>gi|189347539|ref|YP_001944068.1| tRNA-specific 2-thiouridylase MnmA [Chlorobium limicola DSM 245]
 gi|189341686|gb|ACD91089.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Chlorobium limicola DSM 245]
          Length = 358

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 43/189 (22%), Gaps = 13/189 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +K + + +   SGG DS+        +  RV  ++                    +    
Sbjct: 1   MKSSQAVVTGISGGVDSAVAACLLHRQGYRVTGINIRILDTPVDNPS--------LQPSR 52

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
               D       +    L      ++ +           PN  +     I        A 
Sbjct: 53  LVISDHPDFQIPVFSLNLSAKFFDAVIRYFRDDYLSGRTPNPCMVCNKTIKWYGLLEAAR 112

Query: 125 RLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            L    I  G            R                 L          PL  L K E
Sbjct: 113 MLEAEMIATGHYARTSFSDGRYRLMKGCDPEKDQSYFLWMLSQADLSKTLLPLGALTKPE 172

Query: 180 TWKLAQDIG 188
             +LA+  G
Sbjct: 173 VRELARTFG 181


>gi|307591536|ref|YP_003900335.1| asparagine synthase [Cyanothece sp. PCC 7822]
 gi|306986390|gb|ADN18269.1| asparagine synthase [Cyanothece sp. PCC 7822]
          Length = 617

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 21/53 (39%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            SGG DSS   +  +    +V   S D+G     EL     V + +   + K 
Sbjct: 259 LSGGLDSSIIAALLVQAGLKVRAYSLDFGIEENSELIYAQEVAQFLKIPLIKV 311


>gi|240173151|ref|ZP_04751809.1| argininosuccinate synthase [Mycobacterium kansasii ATCC 12478]
          Length = 398

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           +   +L +SGG D S        +    V  ++ D GQ  +     R     
Sbjct: 1  MSERVILAYSGGLDTSVAISWIGKETGREVVAVAIDLGQGGEDMEVVRQRALD 53


>gi|227549907|ref|ZP_03979956.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Corynebacterium lipophiloflavum DSM 44291]
 gi|227078003|gb|EEI15966.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Corynebacterium lipophiloflavum DSM 44291]
          Length = 517

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 50/184 (27%), Gaps = 16/184 (8%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A+   SGG DS+   +       DR+  +  D+G   + E E                  
Sbjct: 220 AICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRQGEREQVEQ---------DFVAA 270

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +  +   +          + +T+  A +                  L             
Sbjct: 271 TGAKLVTVDEREAFLDKLAGVTEPEAKRKVIGAEFIRSFERAVSSVLSDHTVD------Y 324

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +    +  PL  L K E   + +++G 
Sbjct: 325 LVQGTLYPDVVESGGGTGTANIKSHHNVGGLPDDVEFKLVEPLRLLFKDEVRAVGRELGL 384

Query: 190 QDLV 193
            +++
Sbjct: 385 PEVI 388


>gi|183982482|ref|YP_001850773.1| argininosuccinate synthase ArgG [Mycobacterium marinum M]
 gi|229889882|sp|B2HR32|ASSY_MYCMM RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|183175808|gb|ACC40918.1| argininosuccinate synthase ArgG [Mycobacterium marinum M]
          Length = 398

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           +   +L +SGG D S        +    V  ++ D GQ  +     R     
Sbjct: 1  MSERVILAYSGGLDTSVAISWIGKETGREVVAVAIDLGQGGEDMEVVRQRALD 53


>gi|171914844|ref|ZP_02930314.1| argininosuccinate synthase [Verrucomicrobium spinosum DSM 4136]
          Length = 433

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 37/123 (30%), Gaps = 7/123 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L +SGG D+S  LSW  D +D  V     + GQ ++++        KK      
Sbjct: 1   MKKKIVLAYSGGLDTSVLLSWIKDTYDAEVIAFCANIGQDDELKGLNAK--AKKTGASKI 58

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              D   E     +  +      +            ++    +  R +         A  
Sbjct: 59  YIDDLQEEFARDFIYPMMQ----AGAIYEGQYFLGTSIARPLIAKRMVEIAQAEGATAIA 114

Query: 126 LGI 128
            G 
Sbjct: 115 HGA 117


>gi|44804828|gb|AAS47712.1| guanosine monophosphate synthase [Cryptosporidium parvum]
          Length = 684

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 47/186 (25%), Gaps = 16/186 (8%)

Query: 12  LLLF-SGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           +LLF SGG DS+   +        D+V  L  D G   K E +    +  K        K
Sbjct: 257 VLLFLSGGVDSTVTFALLNKALGQDKVLGLHIDNGFMRKNESKNIELLYHKFGFKNFIIK 316

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D       +   I         T     ++                            G 
Sbjct: 317 DYSNSFLNIIKNI---------TDPQKKRMAIGEHFINIKNIFIQEQNFDPNNWLLAQGT 367

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
               I       +      H         +   +     +  PL  L K E   + + IG
Sbjct: 368 LYPDIIESGGTKNSNTIKTHHNR----VDMIYDLIKKGLIIEPLRELYKDEVRMIGKKIG 423

Query: 189 GQDLVN 194
             D + 
Sbjct: 424 LNDELI 429


>gi|66356318|ref|XP_625300.1| GMP synthase [Cryptosporidium parvum Iowa II]
 gi|46226272|gb|EAK87292.1| GMP synthase [Cryptosporidium parvum Iowa II]
          Length = 691

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 47/186 (25%), Gaps = 16/186 (8%)

Query: 12  LLLF-SGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           +LLF SGG DS+   +        D+V  L  D G   K E +    +  K        K
Sbjct: 264 VLLFLSGGVDSTVTFALLNKALGQDKVLGLHIDNGFMRKNESKNIELLYHKFGFKNFIIK 323

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           D       +   I         T     ++                            G 
Sbjct: 324 DYSNSFLNIIKNI---------TDPQKKRMAIGEHFINIKNIFIQEQNFDPNNWLLAQGT 374

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
               I       +      H         +   +     +  PL  L K E   + + IG
Sbjct: 375 LYPDIIESGGTKNSNTIKTHHNR----VDMIYDLIKKGLIIEPLRELYKDEVRMIGKKIG 430

Query: 189 GQDLVN 194
             D + 
Sbjct: 431 LNDELI 436


>gi|330994686|ref|ZP_08318609.1| Argininosuccinate synthase [Gluconacetobacter sp. SXCC-1]
 gi|329758327|gb|EGG74848.1| Argininosuccinate synthase [Gluconacetobacter sp. SXCC-1]
          Length = 409

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 48/156 (30%), Gaps = 13/156 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE---LM 64
              +L +SGG D+S  L W    +   V T + D GQ  ++E        +        +
Sbjct: 7   KKVVLAYSGGLDTSVILRWLQTTYNCEVVTFTADLGQGEELEP--ARRKAEMFGVKEIFV 64

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +++  +D + P+     +         ++           +  R I         A 
Sbjct: 65  EDLRETFVKDFVFPMFRANALYEGQYLLGTSIARP-------LIAQRQIEIAEQVGADAV 117

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
             G T         + + Y      T+ A     +L
Sbjct: 118 AHGATGKGNDQVRFELAYYALKPDITVIAPWREWDL 153


>gi|325916006|ref|ZP_08178299.1| GMP synthase (glutamine-hydrolyzing) [Xanthomonas vesicatoria ATCC
           35937]
 gi|325537816|gb|EGD09519.1| GMP synthase (glutamine-hydrolyzing) [Xanthomonas vesicatoria ATCC
           35937]
          Length = 521

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 49/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D G     E +              +   
Sbjct: 226 VILGLSGGVDSSVVAALLHRAIGDKLNCVFVDTGLLRWQEGD--------------QVMA 271

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E   + +  +                +        +              A  L   
Sbjct: 272 MFAEHMGVKVIRVNAADRYFAKLEGVSDPEAKRKIIGNLFVDIFDEESGKLANAKWLAQG 331

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S     +   I++      L     + +  PL  L K E  +L  ++G 
Sbjct: 332 TIYPDVIESAGS--KTGKAHVIKSHHNVGGLPEHMKLGLVEPLRELFKDEVRRLGVELGL 389

Query: 190 Q 190
            
Sbjct: 390 P 390


>gi|315604497|ref|ZP_07879561.1| argininosuccinate synthase [Actinomyces sp. oral taxon 180 str.
          F0310]
 gi|315313781|gb|EFU61834.1| argininosuccinate synthase [Actinomyces sp. oral taxon 180 str.
          F0310]
          Length = 406

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 1/55 (1%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
          +      +L +SGG D+S  + W  ++    V  ++ D GQ  +     R     
Sbjct: 1  MSSKDRVVLAYSGGLDTSVAIGWIGEQTGREVVAVAVDVGQGGEDLEVIRQRALD 55


>gi|268610281|ref|ZP_06144008.1| asparagine synthase (glutamine-hydrolyzing) [Ruminococcus
           flavefaciens FD-1]
          Length = 602

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 41/156 (26%), Gaps = 8/156 (5%)

Query: 15  FSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            SGG DSS       +    +   ++T S DY Q N    +          E +    + 
Sbjct: 257 LSGGLDSSLISSVAAAEMKKQGRTLQTFSVDY-QGNYRYFQKSHFQPDSDPEYIRCMAEY 315

Query: 71  LGEDH---ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           LG +H   ++ +  L      ++       + D +            +   A +      
Sbjct: 316 LGTEHHWTVVDIPELVAALDEAVDARGLPGMADVDASLLLFCREIKKYGTVALSGECADE 375

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGME 163
           I        + D             A   +      
Sbjct: 376 IFGGYPWYRDKDIRMTDGFPWAQSTAYRNSFMCDRY 411


>gi|228923378|ref|ZP_04086666.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
          huazhongensis BGSC 4BD1]
 gi|228836332|gb|EEM81685.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
          huazhongensis BGSC 4BD1]
          Length = 411

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 12 EKKKVVLAYSGGLDTSVAIKWLQEKDYDIIALCLDLG 48


>gi|225620410|ref|YP_002721667.1| argininosuccinate lyase [Brachyspira hyodysenteriae WA1]
 gi|254807509|sp|C0R1H5|ASSY_BRAHW RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|225215229|gb|ACN83963.1| argininosuccinate lyase [Brachyspira hyodysenteriae WA1]
          Length = 406

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVR 57
               +L +SGG D++  + W  + +   V  +  D GQ  + +      ++
Sbjct: 1  MKKKLVLAYSGGLDTTVIIPWLKENYDYDVIAVCVDVGQGTETDGLEEKALK 52


>gi|238590061|ref|XP_002392203.1| hypothetical protein MPER_08255 [Moniliophthora perniciosa FA553]
 gi|215457930|gb|EEB93133.1| hypothetical protein MPER_08255 [Moniliophthora perniciosa FA553]
          Length = 173

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 17/153 (11%), Positives = 43/153 (28%), Gaps = 3/153 (1%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           ++  SGG DSS       +R   +  +   ++  R++   +      +   ++    K  
Sbjct: 1   VIAMSGGVDSSVVAKLLSERDHDLSAVFMRNWDLRDESGTDEGCQWERDWNDVRRLCKAL 60

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                ++ L+   +        ++ +              R I F      L+   G   
Sbjct: 61  DIPCKMVDLS--KEYWTRIFEPSLEIWQSGQTPNPDVWCNREIKFGALLDRLSLDEGTWL 118

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGME 163
                    +    + R   + A +   +    
Sbjct: 119 ATGHYARKAWQEGSNPRPKLLSAKDRIKDQAFY 151


>gi|154509119|ref|ZP_02044761.1| hypothetical protein ACTODO_01638 [Actinomyces odontolyticus ATCC
          17982]
 gi|293189891|ref|ZP_06608597.1| argininosuccinate synthase [Actinomyces odontolyticus F0309]
 gi|153798753|gb|EDN81173.1| hypothetical protein ACTODO_01638 [Actinomyces odontolyticus ATCC
          17982]
 gi|292821194|gb|EFF80140.1| argininosuccinate synthase [Actinomyces odontolyticus F0309]
          Length = 406

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 1/55 (1%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
          +      +L +SGG D+S  + W  ++    V  ++ D GQ  +     R     
Sbjct: 1  MSSKDRVVLAYSGGLDTSVAIGWIGEQTGREVVAVAVDVGQGGEDLEVIRQRALD 55


>gi|120601479|ref|YP_965879.1| hypothetical protein Dvul_0429 [Desulfovibrio vulgaris DP4]
 gi|120561708|gb|ABM27452.1| conserved hypothetical protein [Desulfovibrio vulgaris DP4]
          Length = 295

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 15/47 (31%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
          +  SGG DS   +  AL    RV  L          E        ++
Sbjct: 22 VALSGGVDSRFLVHMALRAGCRVVALHATGPHVAPRETLWARDWAQR 68


>gi|110669560|ref|YP_659371.1| argininosuccinate synthase [Haloquadratum walsbyi DSM 16790]
 gi|119361280|sp|Q18E36|ASSY_HALWD RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|109627307|emb|CAJ53797.1| argininosuccinate synthase [Haloquadratum walsbyi DSM 16790]
          Length = 397

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 10 SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
             L FSGG D++ C+S   +   +D V  ++ D GQ      E +       ++L 
Sbjct: 3  RVALAFSGGLDTTVCVSLLKEEYGYDEVIGVTVDVGQPATEFEEAQATADAHGIDLH 59


>gi|103486127|ref|YP_615688.1| GMP synthase [Sphingopyxis alaskensis RB2256]
 gi|98976204|gb|ABF52355.1| GMP synthase (glutamine-hydrolyzing) [Sphingopyxis alaskensis
           RB2256]
          Length = 537

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 54/184 (29%), Gaps = 17/184 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DS+       +   +++  +  D+G     E E    + +          
Sbjct: 241 RVLCGLSGGVDSAVAAVLIHEAIGEQLTCVFVDHGLLRMNEREQVERLFR---------- 290

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + + +PL ++                +                       A  L  
Sbjct: 291 ----DHYNIPLVVVDAEERFMAGLAGITDPEQKRKFIGAEFINVFEEEARKIGGADFLAQ 346

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+    +      TI++      L    ++ +  PL  L K E   L +++G
Sbjct: 347 GTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRLLGKELG 404

Query: 189 GQDL 192
             D+
Sbjct: 405 LPDI 408


>gi|52145153|ref|YP_081675.1| cell cycle protein [Bacillus cereus E33L]
 gi|61216463|sp|Q63HD6|TILS_BACCZ RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|51978622|gb|AAU20172.1| cell cycle protein [Bacillus cereus E33L]
          Length = 476

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/195 (11%), Positives = 53/195 (27%), Gaps = 21/195 (10%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D++K+  + ++  SGG DS   L + L++             R   + E  +     +  
Sbjct: 17  DVLKEHSTIVVGVSGGPDSLALLYYLLEK-------------RAAKQFEIVVAHVDHMFR 63

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                 D   ED      +   +     T  + +                     F   +
Sbjct: 64  -----GDESHEDLQFVQDLCKGLGVICETIRINVSQYQQQYGMNAQVAARECRYAFLERI 118

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKKYE 179
             +     + +G    D       R       +    + ++       +  PL+ + K E
Sbjct: 119 MKKYDARYVALGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGYLIRPLLGVTKEE 178

Query: 180 TWKLAQDIGGQDLVN 194
                  +     ++
Sbjct: 179 IVDYCNKLKIIPRID 193


>gi|329928698|ref|ZP_08282547.1| argininosuccinate synthase [Paenibacillus sp. HGF5]
 gi|328937479|gb|EGG33897.1| argininosuccinate synthase [Paenibacillus sp. HGF5]
          Length = 410

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 40/123 (32%), Gaps = 9/123 (7%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKI-VELMP 65
               +L +SGG D+S  L W  + +D  +   + D GQ+ +++      +        + 
Sbjct: 3   KQKIVLAYSGGLDTSVILKWLKETYDAEIIAFTADIGQKEELDGLEEKALATGASKVYID 62

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +D    D I P+   G +         ++           +  R +         A  
Sbjct: 63  DLRDEFANDFIFPMFQAGAMYEGQYLLGTSIARP-------LIAKRMVDIARAEGATAIA 115

Query: 126 LGI 128
            G 
Sbjct: 116 HGA 118


>gi|325267273|ref|ZP_08133935.1| argininosuccinate synthase [Kingella denitrificans ATCC 33394]
 gi|324981210|gb|EGC16860.1| argininosuccinate synthase [Kingella denitrificans ATCC 33394]
          Length = 443

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 26/72 (36%), Gaps = 3/72 (4%)

Query: 1  MNDIIKK---APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M+ I++         + FSGG D+S  L W   +       + + GQ ++ +        
Sbjct: 1  MSTILQSLPVNQKVGIAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 MEYGAENARLID 72


>gi|312134203|ref|YP_004001541.1| phosphoadenosine phosphosulfate reductase [Caldicellulosiruptor
           owensensis OL]
 gi|311774254|gb|ADQ03741.1| phosphoadenosine phosphosulfate reductase [Caldicellulosiruptor
           owensensis OL]
          Length = 303

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 20/59 (33%), Gaps = 2/59 (3%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD--YGQRNKVELECRLCVRKK 59
            +  K    L++ SGG+DS             V  +  +   GQ +    +      +K
Sbjct: 42  RMFDKKDKILVVISGGKDSMALWHILAKEGYNVTGMYINLGIGQYSDKSQQVVESFAQK 100


>gi|300115023|ref|YP_003761598.1| GMP synthase large subunit [Nitrosococcus watsonii C-113]
 gi|299540960|gb|ADJ29277.1| GMP synthase, large subunit [Nitrosococcus watsonii C-113]
          Length = 524

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 57/187 (30%), Gaps = 17/187 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           A + LL  SGG DSS   +       D++  +  D G   + E                +
Sbjct: 226 ADTVLLGLSGGVDSSVAAALLHKAIGDQLICVFVDNGLLRQGE--------------ADQ 271

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +      + +  +   +         +  +        V            + A  L
Sbjct: 272 VMATFARHLGIKVIRISAEARFLEALAGVIDPEAKRKIIGRVFIEVFEEEAAKLSNAQWL 331

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+  +G    +   I++      L  E ++ +  PL  L K E  +L  +
Sbjct: 332 AQGTIYPDVIES--AGGKTGKAQVIKSHHNVGGLPEELNLKLLEPLRELFKDEVRQLGTE 389

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 390 LGLPFEL 396


>gi|218131252|ref|ZP_03460056.1| hypothetical protein BACEGG_02858 [Bacteroides eggerthii DSM 20697]
 gi|217986554|gb|EEC52889.1| hypothetical protein BACEGG_02858 [Bacteroides eggerthii DSM 20697]
          Length = 576

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 45/187 (24%), Gaps = 14/187 (7%)

Query: 13  LLFSGGQDSSTCLSWALD-RFDRVET----------LS-FDYGQRNKVELECRLCVRKKI 60
           +L SGG DSS   + A      R+ET          L  F  G +   +L     V + I
Sbjct: 252 VLLSGGLDSSVISAIAKKYAGKRIETDNKSDAWWPRLHSFAVGLKGAPDLLKAREVAQHI 311

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  +      ++ +  L  +     +     V        L          + L    
Sbjct: 312 GTVHHEIN-YTVQEGLDALRDVIYFIETYDVTTVRASTPMYLLARVIKSMGIKMVLSGEG 370

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
                 G                   R  +   +   +              +     E 
Sbjct: 371 AD-EVFGGYLYFHKAPTPQAFHEETVRKLSKLYLYDCLRANKSLSAWGVEGRVPFLDKEF 429

Query: 181 WKLAQDI 187
             +A  +
Sbjct: 430 LDVAMRL 436


>gi|261409619|ref|YP_003245860.1| argininosuccinate synthase [Paenibacillus sp. Y412MC10]
 gi|261286082|gb|ACX68053.1| argininosuccinate synthase [Paenibacillus sp. Y412MC10]
          Length = 410

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 40/123 (32%), Gaps = 9/123 (7%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKI-VELMP 65
               +L +SGG D+S  L W  + +D  +   + D GQ+ +++      +        + 
Sbjct: 3   KQKIVLAYSGGLDTSVILKWLKETYDAEIIAFTADIGQKEELDGLEEKALATGASKVYID 62

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             +D    D I P+   G +         ++           +  R +         A  
Sbjct: 63  DLRDEFANDFIFPMFQAGAMYEGQYLLGTSIARP-------LIAKRMVDIARAEGATAIA 115

Query: 126 LGI 128
            G 
Sbjct: 116 HGA 118


>gi|195998796|ref|XP_002109266.1| hypothetical protein TRIADDRAFT_21771 [Trichoplax adhaerens]
 gi|190587390|gb|EDV27432.1| hypothetical protein TRIADDRAFT_21771 [Trichoplax adhaerens]
          Length = 399

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 5  IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
          +      ++L +SGG D+S  L W  ++   V     D GQ
Sbjct: 1  MSDEKETVVLAYSGGLDTSCILVWLQEQGFNVIAYMADVGQ 41


>gi|196046932|ref|ZP_03114153.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus
           03BB108]
 gi|196022307|gb|EDX60993.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus
           03BB108]
          Length = 633

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 23/60 (38%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS   S A +    + T S  + QR   E++      +K+         S  E 
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKEF 322


>gi|163734649|ref|ZP_02142088.1| asparagine synthetase, putative [Roseobacter litoralis Och 149]
 gi|161392142|gb|EDQ16472.1| asparagine synthetase, putative [Roseobacter litoralis Och 149]
          Length = 631

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 25/66 (37%), Gaps = 2/66 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVR-KKIVE 62
           ++   S   + SGG DSS     A  +    V+T+SF YG     +    +    +    
Sbjct: 238 MRPEGSVGAMLSGGLDSSALAGLAAKQSGAPVQTVSFVYGADKAYDETRYIDAANETFGS 297

Query: 63  LMPKWK 68
           +  K  
Sbjct: 298 IPHKIA 303


>gi|149925238|ref|ZP_01913525.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Plesiocystis pacifica SIR-1]
 gi|149813888|gb|EDM73547.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Plesiocystis pacifica SIR-1]
          Length = 520

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 63/191 (32%), Gaps = 18/191 (9%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
            + + ++ + +   SGG DSS   +       DR+  +  D G   K E +         
Sbjct: 222 REQVGESGTVICGLSGGVDSSVAAALVEKAIGDRLHCIFVDNGLLRKNERQ--------- 272

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            ++   + + L    ++  A    +   +   +  +K +        V       L    
Sbjct: 273 -QVEAMFNERLHNPLVVADAGAQFLEQLAGITDPEVKRKRIGATFIDVFDDKAKGL---- 327

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
             A  L    +   V E+  +  P      I+       L  + ++ V  PL  L K E 
Sbjct: 328 GGADFLVQGTLYPDVIESVSARGPSAT---IKTHHNVGGLPEKMNMLVVEPLRELFKDEV 384

Query: 181 WKLAQDIGGQD 191
            +L   +G  +
Sbjct: 385 RRLGLHLGLPE 395


>gi|2765079|emb|CAA71524.1| GMP synthase [Corynebacterium ammoniagenes]
          Length = 522

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 18/47 (38%), Gaps = 1/47 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLC 55
            A+   SGG DS+   +       DR+  +  D+G     E E    
Sbjct: 222 RAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGEREQVEK 268


>gi|46581343|ref|YP_012151.1| hypothetical protein DVU2939 [Desulfovibrio vulgaris str.
          Hildenborough]
 gi|46450765|gb|AAS97411.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
          Hildenborough]
 gi|311235002|gb|ADP87856.1| hypothetical protein Deval_2714 [Desulfovibrio vulgaris RCH1]
          Length = 295

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 15/47 (31%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKK 59
          +  SGG DS   +  AL    RV  L          E        ++
Sbjct: 22 VALSGGVDSRFLVHMALRAGCRVVALHATGPHVAPRETLWARDWAQR 68


>gi|87119585|ref|ZP_01075482.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Marinomonas sp. MED121]
 gi|86165061|gb|EAQ66329.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Marinomonas sp. MED121]
          Length = 525

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 50/184 (27%), Gaps = 19/184 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPK 66
              LL  SGG DSS   +       D++  +  D G  R     +      + +   + +
Sbjct: 228 KQVLLALSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRLNEGDQVMAMFAENMGVKVIR 287

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     L L+ L   +     + +                  I FL          
Sbjct: 288 VDAED-----LFLSRLKGEADPEAKRKIIGNSFIEIFDEESSKLNEIEFLAQGTIY---- 338

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                       + +     +   I++      L  +  + +  PL  L K E  KL   
Sbjct: 339 --------PDVIESAASKTGKAHVIKSHHNVGGLPDDMKMELVEPLRELFKDEVRKLGLA 390

Query: 187 IGGQ 190
           +G  
Sbjct: 391 LGLP 394


>gi|332665535|ref|YP_004448323.1| NAD+ synthetase [Haliscomenobacter hydrossis DSM 1100]
 gi|332334349|gb|AEE51450.1| NAD+ synthetase [Haliscomenobacter hydrossis DSM 1100]
          Length = 545

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 55/212 (25%), Gaps = 17/212 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALD----RFDRVETLSFDYGQRNKVELECRLCVRKKIV--- 61
             A+L  SGG DS+  +  A         RV  +   Y   + V       + + +    
Sbjct: 289 KKAILGLSGGIDSAVTVVLAARALGADNVRVLLMPSQYSSDHSVND--ARKLAENLGVQY 346

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +L+            L     G     ++T+          L   F      I L  +  
Sbjct: 347 DLLAVEPMYQAYMETLKPHFWGFPF--NITEENLQARIRGMLLMAFSNKFGHILLNTSNK 404

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
               +G   +   +C          + +           G        T     +     
Sbjct: 405 SEMAVGYGTLYGDMCGGLSVLGDVYKTEVYELAHYINKDGEVIPENSITKPPSAELRPDQ 464

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYE 213
           K +  +   D+++ +L      Y      +  
Sbjct: 465 KDSDSLPDYDILDAVL------YNYIERHQGP 490


>gi|319948169|ref|ZP_08022329.1| argininosuccinate synthase [Dietzia cinnamea P4]
 gi|319438153|gb|EFV93113.1| argininosuccinate synthase [Dietzia cinnamea P4]
          Length = 399

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           +   +L +SGG D S        +    V  ++ D GQ  +     R     
Sbjct: 1  MSDRVVLAYSGGLDTSVAISWIGKETGAEVVAVAIDLGQGGEDMDVVRQRALD 53


>gi|293189088|ref|ZP_06607814.1| GMP synthase [Actinomyces odontolyticus F0309]
 gi|292821933|gb|EFF80866.1| GMP synthase [Actinomyces odontolyticus F0309]
          Length = 518

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 50/184 (27%), Gaps = 11/184 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DSS   +       D++     D+G     E E          ++   +  
Sbjct: 216 VICALSGGVDSSVAAALVHRAVGDQLTCFFIDHGLLRAGERE----------QVENDYAR 265

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   I        +S  +       K +                ++     A      
Sbjct: 266 GMGIRVITCDESERFLSALAGVTEPEAKRKIIGREFIRSFEAAQKQVIEEVGAAGGEVKF 325

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +    +  PL  L K E   + +++G 
Sbjct: 326 LVQGTLYPDVVESGGGEGAANIKSHHNVGGLPEDMTFELVEPLRTLFKDEVRAVGRELGL 385

Query: 190 QDLV 193
            D +
Sbjct: 386 PDYL 389


>gi|293364526|ref|ZP_06611251.1| tRNA(Ile)-lysidine synthetase [Streptococcus oralis ATCC 35037]
 gi|307702816|ref|ZP_07639766.1| tRNA(Ile)-lysidine synthetase [Streptococcus oralis ATCC 35037]
 gi|291317034|gb|EFE57462.1| tRNA(Ile)-lysidine synthetase [Streptococcus oralis ATCC 35037]
 gi|307623672|gb|EFO02659.1| tRNA(Ile)-lysidine synthetase [Streptococcus oralis ATCC 35037]
          Length = 425

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 47/202 (23%), Gaps = 18/202 (8%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWAL-----DRFDRVETLSFDYGQRNKV-ELECRLCV 56
           +  KK    +L  SGG DS   L   L     +    +     ++ QR++    E  L  
Sbjct: 14  EYFKKHSKVVLALSGGLDSMF-LFQLLSTYQNELGIELILAHVNHKQRSESDWEENELRK 72

Query: 57  RKKIVELMPKWKDSLGED-----HILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPG 110
                EL        G+                I         V     D+ +    +  
Sbjct: 73  LADAAELPIYITSFSGDFSEARAREFRYDFFRKIMKEVGATALVTAHHADDQVETILMRL 132

Query: 111 RNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT 170
                L     +     + +I I      +                  N    + V    
Sbjct: 133 IRGSRLRHLTGIKESQVVDDIEIIRPLLQFHKKDFSPIFHFEDQTNQENTYFRNRVRNRY 192

Query: 171 -----PLMWLKKYETWKLAQDI 187
                      K     L ++I
Sbjct: 193 LPELEKENPRLKSAILDLGREI 214


>gi|255020986|ref|ZP_05293041.1| tRNA(Ile)-lysidine synthetase [Acidithiobacillus caldus ATCC
          51756]
 gi|254969591|gb|EET27098.1| tRNA(Ile)-lysidine synthetase [Acidithiobacillus caldus ATCC
          51756]
          Length = 465

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 21/64 (32%)

Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           +L FSGG+DS+                  D+G   +       C        +P     
Sbjct: 25 VILAFSGGRDSTALFWALHAIGQDFVAAHVDHGWHPRSAEWAARCAEVAASAGVPFVLRQ 84

Query: 71 LGED 74
          LG+D
Sbjct: 85 LGKD 88


>gi|251771882|gb|EES52456.1| GMP synthase [glutamine-hydrolyzing] [Leptospirillum
           ferrodiazotrophum]
          Length = 513

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 45/182 (24%), Gaps = 18/182 (9%)

Query: 12  LLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           +   SGG DS+           +R      D G   K EL         +   +      
Sbjct: 220 ICALSGGIDSTVTALLCHRALGERFHAFFVDNGLLRKNELPEMERDLSSLGIPLEIIDAR 279

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                 L L  L  ++     +    +   +             +L         +   +
Sbjct: 280 D-----LFLDRLKGVADPEKKRKTIGRTFIDVFVREARRRGTYRYLAQGTLYPDVIESVS 334

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
              G                 ++      L       +  PL  L K E  +L +++G  
Sbjct: 335 SFGGPSAVI------------KSHHNVGGLPKRMPFELVEPLRELFKDEVRRLGRELGLS 382

Query: 191 DL 192
           D 
Sbjct: 383 DR 384


>gi|228965223|ref|ZP_04126317.1| Asparagine synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228794457|gb|EEM41969.1| Asparagine synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
          Length = 633

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 23/60 (38%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS   S A +    + T S  + QR   E++      +K+         S  E 
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKEF 322


>gi|229096748|ref|ZP_04227718.1| Asparagine synthetase [Bacillus cereus Rock3-29]
 gi|229102849|ref|ZP_04233543.1| Asparagine synthetase [Bacillus cereus Rock3-28]
 gi|229115728|ref|ZP_04245131.1| Asparagine synthetase [Bacillus cereus Rock1-3]
 gi|228667713|gb|EEL23152.1| Asparagine synthetase [Bacillus cereus Rock1-3]
 gi|228680522|gb|EEL34705.1| Asparagine synthetase [Bacillus cereus Rock3-28]
 gi|228686590|gb|EEL40498.1| Asparagine synthetase [Bacillus cereus Rock3-29]
          Length = 633

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 23/60 (38%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS   S A +    + T S  + QR   E++      +K+         S  E 
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKEF 322


>gi|168209936|ref|ZP_02635561.1| argininosuccinate synthase [Clostridium perfringens B str. ATCC
           3626]
 gi|170711963|gb|EDT24145.1| argininosuccinate synthase [Clostridium perfringens B str. ATCC
           3626]
          Length = 403

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 46/158 (29%), Gaps = 9/158 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +KK    +L +SGG D+S  + W  +     V  +  + GQ +++       ++    ++
Sbjct: 1   MKKFNKVILAYSGGLDTSIIIPWLKENYGCEVIAVVGNVGQSDELVGLKEKAIKTGASKI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     ED+I P    G              +   +     +  R +         
Sbjct: 61  YIEDLTKEFVEDYIFPTIQAGAKYEG-------KYLLGTSFARPIIAKRLVEIAKLEGAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         + +         I A      +
Sbjct: 114 AICHGCTGKGNDQVRFELAIKTFNPEMQIIAPWRTWEI 151


>gi|169344424|ref|ZP_02865393.1| argininosuccinate synthase [Clostridium perfringens C str. JGS1495]
 gi|182624137|ref|ZP_02951924.1| argininosuccinate synthase [Clostridium perfringens D str. JGS1721]
 gi|169297344|gb|EDS79453.1| argininosuccinate synthase [Clostridium perfringens C str. JGS1495]
 gi|177910753|gb|EDT73113.1| argininosuccinate synthase [Clostridium perfringens D str. JGS1721]
          Length = 403

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 46/158 (29%), Gaps = 9/158 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +KK    +L +SGG D+S  + W  +     V  +  + GQ +++       ++    ++
Sbjct: 1   MKKFNKVILAYSGGLDTSIIIPWLKENYGCEVIAVVGNVGQSDELVGLKEKAIKTGASKI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     ED+I P    G              +   +     +  R +         
Sbjct: 61  YIEDLTKEFVEDYIFPTIQAGAKYEG-------KYLLGTSFARPIIAKRLVEIAKLEGAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         + +         I A      +
Sbjct: 114 AICHGCTGKGNDQVRFELAIKTFNPEMQIIAPWRTWEI 151


>gi|110799516|ref|YP_695135.1| argininosuccinate synthase [Clostridium perfringens ATCC 13124]
 gi|119361265|sp|Q0TTA5|ASSY_CLOP1 RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|110674163|gb|ABG83150.1| argininosuccinate synthase [Clostridium perfringens ATCC 13124]
          Length = 403

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 46/158 (29%), Gaps = 9/158 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +KK    +L +SGG D+S  + W  +     V  +  + GQ +++       ++    ++
Sbjct: 1   MKKFNKVILAYSGGLDTSIIIPWLKENYGCEVIAVVGNVGQSDELVGLKEKAIKTGASKI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     ED+I P    G              +   +     +  R +         
Sbjct: 61  YIEDLTKEFVEDYIFPTIQAGAKYEG-------KYLLGTSFARPIIAKRLVEIAKLEGAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         + +         I A      +
Sbjct: 114 AICHGCTGKGNDQVRFELAIKTFNPEMQIIAPWRTWEI 151


>gi|58336584|ref|YP_193169.1| GMP synthase [Lactobacillus acidophilus NCFM]
 gi|227903135|ref|ZP_04020940.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Lactobacillus acidophilus ATCC 4796]
 gi|75358092|sp|Q5FMD6|GUAA_LACAC RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|58253901|gb|AAV42138.1| GMP synthase [Lactobacillus acidophilus NCFM]
 gi|227869121|gb|EEJ76542.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Lactobacillus acidophilus ATCC 4796]
          Length = 516

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 57/186 (30%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS   +       D++  +  D+G   K E +    V K + + +   
Sbjct: 222 KKVILGLSGGVDSSVTATLLHKAIGDQLTAIFVDHGMLRKDEGD---QVMKALNKDLGVN 278

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       L  L  ++     + +  K             +++ FL         + 
Sbjct: 279 IIRVNAQERF-LNKLKGVTDPEQKRKIIGKEFIEVFNEEAKKLKDVDFLAQGTLYTDVIE 337

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                                 TI++      L  + +  +  PL  L K E  +L + +
Sbjct: 338 ---------------SGTNTAQTIKSHHNVGGLPEDMNFKLIEPLRKLFKDEVRELGEKL 382

Query: 188 GGQDLV 193
           G    +
Sbjct: 383 GIPHDL 388


>gi|61216557|sp|Q72C25|TILS_DESVH RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
          Length = 347

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 31/121 (25%), Gaps = 14/121 (11%)

Query: 7   KAPSALLLFSGGQDSSTCL----SWALDRFDRVETLSFDYGQRNKV--ELECRLCVRKKI 60
           +    ++  SGG DS+  L             +  L  D+G R +   E    +     +
Sbjct: 18  RNCHCVVALSGGADSTALLLILHYLRQRLGLSLSALHVDHGLRPESAAEARAAVTFCHAL 77

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
              +          H L +  L  +      +       D        P  + I      
Sbjct: 78  GIPLAV--------HTLTVDELAAVWRVGTEEAGRKARYDLLAAALPSPAADWICTGHHL 129

Query: 121 T 121
            
Sbjct: 130 G 130


>gi|18309673|ref|NP_561607.1| argininosuccinate synthase [Clostridium perfringens str. 13]
 gi|24211506|sp|Q8XMJ7|ASSY_CLOPE RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|18144350|dbj|BAB80397.1| argininosuccinate synthase [Clostridium perfringens str. 13]
          Length = 405

 Score = 44.1 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 46/158 (29%), Gaps = 9/158 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +KK    +L +SGG D+S  + W  +     V  +  + GQ +++       ++    ++
Sbjct: 3   MKKFNKVILAYSGGLDTSIIIPWLKENYGCEVIAVVGNVGQSDELVGLKEKAIKTGASKI 62

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     ED+I P    G              +   +     +  R +         
Sbjct: 63  YIEDLTKEFVEDYIFPTIQAGAKYEG-------KYLLGTSFARPIIAKRLVEIAKLEGAD 115

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         + +         I A      +
Sbjct: 116 AICHGCTGKGNDQVRFELAIKTFNPEMQIIAPWRTWEI 153


>gi|319637829|ref|ZP_07992595.1| tRNA-specific 2-thiouridylase mnmA [Neisseria mucosa C102]
 gi|317400984|gb|EFV81639.1| tRNA-specific 2-thiouridylase mnmA [Neisseria mucosa C102]
          Length = 367

 Score = 43.8 bits (101), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 45/180 (25%), Gaps = 10/180 (5%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++  SGG DSS   +    +  ++  +     + +  +  C +       +       + 
Sbjct: 11  IVGLSGGVDSSVTAALLKQQGHQISGVFMQNWEDDDNDEYCSIKQ-----DSFDAIAVAD 65

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
                + +         ++      +      PN  V     I        A   G   I
Sbjct: 66  IIGIDIDIVNFAAQYKDNVFAYFLKEYSAGRTPNPDVLCNAEIKFKCFLDYAIEQGADTI 125

Query: 132 VIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
             G                              L          PL  L+K E  +LA++
Sbjct: 126 ATGHYARKEVRNGVHYLLKGLDQNKDQSYFLYRLKPFQLERAIFPLGELEKPEVRRLAEE 185


>gi|224541157|ref|ZP_03681696.1| hypothetical protein CATMIT_00310 [Catenibacterium mitsuokai DSM
          15897]
 gi|224525908|gb|EEF95013.1| hypothetical protein CATMIT_00310 [Catenibacterium mitsuokai DSM
          15897]
          Length = 266

 Score = 43.8 bits (101), Expect = 0.018,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 22/64 (34%), Gaps = 4/64 (6%)

Query: 8  APSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
              ++ FSGG DS+  L  A          V  ++        +E +    + +++  +
Sbjct: 12 HEDVMIAFSGGVDSTLLLKMAVEASKKYHTHVYAVTIQTALHPVMEADEAKRIAEELGAI 71

Query: 64 MPKW 67
              
Sbjct: 72 HKVI 75


>gi|197302721|ref|ZP_03167775.1| hypothetical protein RUMLAC_01451 [Ruminococcus lactaris ATCC
           29176]
 gi|197298303|gb|EDY32849.1| hypothetical protein RUMLAC_01451 [Ruminococcus lactaris ATCC
           29176]
          Length = 515

 Score = 43.8 bits (101), Expect = 0.018,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 44/185 (23%), Gaps = 16/185 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS            ++  +  D+G   K E +    V            
Sbjct: 218 RVLLALSGGVDSSVAAGLLSRAIGKQLTCVFVDHGLLRKDEGDEVEAV------------ 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G      L  +   +       +A    +       +    I      A     +  
Sbjct: 266 --FGPKGQFDLNFIRVNAQERYYNKLAGVT-EPEAKRKIIGEEFIRIFEEEAKKIGAVDF 322

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   SG                         +  PL  L K E  K   ++G
Sbjct: 323 LAQGTIYPDVVESGLGGESAVIKSHHNVGGLPDYVDFKEIIEPLRDLFKDEVRKAGLELG 382

Query: 189 GQDLV 193
             + +
Sbjct: 383 LPEKL 387


>gi|170781642|ref|YP_001709974.1| argininosuccinate synthase [Clavibacter michiganensis subsp.
          sepedonicus]
 gi|189046385|sp|B0RHD5|ASSY_CLAMS RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|169156210|emb|CAQ01352.1| putative argininosuccinate synthase [Clavibacter michiganensis
          subsp. sepedonicus]
          Length = 417

 Score = 43.8 bits (101), Expect = 0.018,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 3/84 (3%)

Query: 7  KAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCV--RKKIVEL 63
           A   +L +SGG D+S  + W        V  L+ D GQ  +     R        +  +
Sbjct: 1  MAERVVLAYSGGLDTSVGIGWLKDATGKEVVALAVDVGQGGEDMEVIRQRALDCGAVEAV 60

Query: 64 MPKWKDSLGEDHILPLAILGDISH 87
          +   KD   +D+I+P      +  
Sbjct: 61 VVDAKDEFADDYIVPALKANALYQ 84


>gi|148273177|ref|YP_001222738.1| argininosuccinate synthase [Clavibacter michiganensis subsp.
          michiganensis NCPPB 382]
 gi|166219962|sp|A5CSJ0|ASSY_CLAM3 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|147831107|emb|CAN02056.1| putative argininosuccinate synthase [Clavibacter michiganensis
          subsp. michiganensis NCPPB 382]
          Length = 412

 Score = 43.8 bits (101), Expect = 0.018,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 3/84 (3%)

Query: 7  KAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCV--RKKIVEL 63
           A   +L +SGG D+S  + W        V  L+ D GQ  +     R        +  +
Sbjct: 1  MAERVVLAYSGGLDTSVGIGWLKDATGKEVVALAVDVGQGGEDMEVIRQRALDCGAVEAV 60

Query: 64 MPKWKDSLGEDHILPLAILGDISH 87
          +   KD   +D+I+P      +  
Sbjct: 61 VVDAKDEFADDYIVPALKANALYQ 84


>gi|134280393|ref|ZP_01767104.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei 305]
 gi|226198381|ref|ZP_03793950.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei Pakistan 9]
 gi|134248400|gb|EBA48483.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei 305]
 gi|225929564|gb|EEH25582.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei Pakistan 9]
          Length = 377

 Score = 43.8 bits (101), Expect = 0.018,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 42/185 (22%), Gaps = 10/185 (5%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++  SGG DSS       ++   V  L     + +     C         + +     + 
Sbjct: 1   MVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQ-----DWIDVVSVAD 55

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
                +            +      +      PN  V     I        A  LG   I
Sbjct: 56  LIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLGAQTI 115

Query: 132 VIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
             G                    T         L          PL  + K    ++A  
Sbjct: 116 ATGHYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTRVREIAAQ 175

Query: 187 IGGQD 191
           IG  +
Sbjct: 176 IGLPN 180


>gi|54023930|ref|YP_118172.1| argininosuccinate synthase [Nocardia farcinica IFM 10152]
 gi|68566237|sp|Q5YYD3|ASSY_NOCFA RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|54015438|dbj|BAD56808.1| putative argininosuccinate synthase [Nocardia farcinica IFM
          10152]
          Length = 400

 Score = 43.8 bits (101), Expect = 0.018,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           +   +L +SGG D S        +    V  ++ D GQ  +     R     
Sbjct: 1  MSERVVLAYSGGLDTSVAISWIGKETGAEVVAVAIDLGQGGEDMNVVRQRALD 53


>gi|299783606|gb|ADJ41604.1| GMP synthase (Glutamine-hydrolyzing) [Lactobacillus fermentum CECT
           5716]
          Length = 517

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 53/186 (28%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS           D++  +  D+G   K E +        +  L    
Sbjct: 223 KKVILGLSGGVDSSVTAVLIHKAIGDQLTCIFVDHGLLRKNEADSV------MKALSADL 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             ++ +       +      S   +      ++                VF         
Sbjct: 277 GVNIIKVDAADRFLGKLKGISDPEQKRKTIGKE-------------FVAVFDEEAKKMKD 323

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +  G   TD          TI++      L  +    +  PL  L K ET +L + +
Sbjct: 324 ADFLAQGTLYTDVIESGTDTAQTIKSHHNVGGLPEKMGFKLIEPLRSLFKDETRQLGEKL 383

Query: 188 GGQDLV 193
           G    +
Sbjct: 384 GIPHDL 389


>gi|288554678|ref|YP_003426613.1| tRNA(Ile)-lysidine synthetase [Bacillus pseudofirmus OF4]
 gi|288545838|gb|ADC49721.1| tRNA(Ile)-lysidine synthetase [Bacillus pseudofirmus OF4]
          Length = 465

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/196 (12%), Positives = 53/196 (27%), Gaps = 23/196 (11%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDR----FDRVETLSFDYGQRNKVELECRLCVRK 58
            ++ +  +  +  SGG DS   L + + R       VE +  ++  R    ++    VRK
Sbjct: 13  KLLNEVQTVFVAVSGGPDSMALLHYLIKRREMYGIEVEAVHVNHQLRGAESVDDEQYVRK 72

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
                         E +I       D+   +    +  +   + L   +           
Sbjct: 73  -----------FCTEHNIPLHTKKMDVQTFASQNKMGTQKAASELRYQWFDEWLENRPHS 121

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
               A+        I +               ++ I             V  P + + K 
Sbjct: 122 CIATAHHGDDQTETILMTMVRGGNLLVPSGINVKRILQNGF--------VIRPFLGITKE 173

Query: 179 ETWKLAQDIGGQDLVN 194
           E     +  G    ++
Sbjct: 174 EIEHYCKREGITPRID 189


>gi|260662339|ref|ZP_05863234.1| GMP synthase [Lactobacillus fermentum 28-3-CHN]
 gi|260553030|gb|EEX25973.1| GMP synthase [Lactobacillus fermentum 28-3-CHN]
          Length = 517

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 53/186 (28%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS           D++  +  D+G   K E +        +  L    
Sbjct: 223 KKVILGLSGGVDSSVTAVLIHKAIGDQLTCIFVDHGLLRKNEADSV------MKALSADL 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             ++ +       +      S   +      ++                VF         
Sbjct: 277 GVNIIKVDAADRFLGKLKGISDPEQKRKTIGKE-------------FVAVFDEEAKKMKD 323

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +  G   TD          TI++      L  +    +  PL  L K ET +L + +
Sbjct: 324 ADFLAQGTLYTDVIESGTDTAQTIKSHHNVGGLPEKMGFKLIEPLRSLFKDETRQLGEKL 383

Query: 188 GGQDLV 193
           G    +
Sbjct: 384 GIPHDL 389


>gi|227515348|ref|ZP_03945397.1| GMP synthase (glutamine-hydrolyzing) [Lactobacillus fermentum ATCC
           14931]
 gi|227086262|gb|EEI21574.1| GMP synthase (glutamine-hydrolyzing) [Lactobacillus fermentum ATCC
           14931]
          Length = 520

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 53/186 (28%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS           D++  +  D+G   K E +        +  L    
Sbjct: 226 KKVILGLSGGVDSSVTAVLIHKAIGDQLTCIFVDHGLLRKNEADSV------MKALSADL 279

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             ++ +       +      S   +      ++                VF         
Sbjct: 280 GVNIIKVDAADRFLGKLKGISDPEQKRKTIGKE-------------FVAVFDEEAKKMKD 326

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +  G   TD          TI++      L  +    +  PL  L K ET +L + +
Sbjct: 327 ADFLAQGTLYTDVIESGTDTAQTIKSHHNVGGLPEKMGFKLIEPLRSLFKDETRQLGEKL 386

Query: 188 GGQDLV 193
           G    +
Sbjct: 387 GIPHDL 392


>gi|325971761|ref|YP_004247952.1| tRNA(Ile)-lysidine synthase [Spirochaeta sp. Buddy]
 gi|324026999|gb|ADY13758.1| tRNA(Ile)-lysidine synthase [Spirochaeta sp. Buddy]
          Length = 484

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 32/117 (27%), Gaps = 8/117 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRN-----KVELECR--LCVR 57
           I       + FSGG DS   L  AL +      L   Y Q +     ++E E        
Sbjct: 21  IDATKRIGVAFSGGSDSLALL-IALRKMYEPSFLHAMYVQHHLRPSNELEAETALNRENC 79

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII 114
           +K+   +       G          G +  ++         ++ N            
Sbjct: 80  QKLGVSLHILDLGKGSVAHAMQTRRGGVEEAARYLRYEALYEECNRGGCTYLATAHN 136


>gi|296410826|ref|XP_002835136.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295627911|emb|CAZ79257.1| unnamed protein product [Tuber melanosporum]
          Length = 541

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 47/170 (27%), Gaps = 6/170 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETL----SFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           +L SGG DSS   S A      V  L    SF  G     +      V K +  +  ++ 
Sbjct: 233 VLLSGGLDSSLIASIAAHD-STVTALPELHSFSIGLSGSPDTIAAKRVAKFLGTVHHEFN 291

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +L E  +  L  +     S     +        L          + L    +     G 
Sbjct: 292 FTLQEG-LDALRDVIYHLESYDVTTIRASTPMYLLSRKIKALGVKMVLSGEGSDEIFGGY 350

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
              V    +  +      R   +   +        +   V   + +L K 
Sbjct: 351 LYFVNAPSKDGFHAENIRRVKNLHLSDCLRANKSTAAWGVEARVPFLDKQ 400


>gi|294086052|ref|YP_003552812.1| GMP synthase - glutamine amidotransferase protein [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292665627|gb|ADE40728.1| GMP synthase - glutamine amidotransferase protein [Candidatus
           Puniceispirillum marinum IMCC1322]
          Length = 515

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 57/185 (30%), Gaps = 17/185 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS       +   D++  +  D+G   K E        +++V L     
Sbjct: 219 KVICGLSGGVDSSVTAVLIHEAIGDQLTCVFVDHGLLRKGE-------AEEVVRLFGGHY 271

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +       +    L  +S  S  +    KI   +    F      I              
Sbjct: 272 NIPLIHRDVSEMFLERLSGVSDPEQ-KRKIIGGSFIEVFDEEAQKIDGARFLAQGT---- 326

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
               +     +          TI++      L  +  + +  PL  L K E   L +++G
Sbjct: 327 ----LYPDVIESISAAGGSDVTIKSHHNVGGLPDDMKLDLVEPLRELFKDEVRNLGRELG 382

Query: 189 GQDLV 193
             +++
Sbjct: 383 LPEVL 387


>gi|270308430|ref|YP_003330488.1| argininosuccinate synthase [Dehalococcoides sp. VS]
 gi|270154322|gb|ACZ62160.1| argininosuccinate synthase [Dehalococcoides sp. VS]
          Length = 406

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 26/69 (37%), Gaps = 3/69 (4%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +   +L +SGG D+S  + W  ++    V  ++ D G   + +         K+     
Sbjct: 1  MSEKVVLAYSGGLDTSAAVKWLQEKYGMDVIAVTIDVGN--EKDFTLIKEKALKVGAKKA 58

Query: 66 KWKDSLGED 74
            +D   E 
Sbjct: 59 YVRDVCKEF 67


>gi|254737278|ref|ZP_05194982.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
           str. Western North America USA6153]
          Length = 630

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 23/60 (38%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS   S A +    + T S  + QR   E++      +K+         S  E 
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKEF 322


>gi|228908013|ref|ZP_04071862.1| Asparagine synthetase [Bacillus thuringiensis IBL 200]
 gi|228851610|gb|EEM96415.1| Asparagine synthetase [Bacillus thuringiensis IBL 200]
          Length = 633

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 23/60 (38%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS   S A +    + T S  + QR   E++      +K+         S  E 
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKEF 322


>gi|227548033|ref|ZP_03978082.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Corynebacterium lipophiloflavum DSM 44291]
 gi|227079887|gb|EEI17850.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Corynebacterium lipophiloflavum DSM 44291]
          Length = 359

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 48/191 (25%), Gaps = 23/191 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELEC------------RLCVR 57
             L   SGG DSS   +  +D    V  +     +  +   E                V 
Sbjct: 2   RVLAAMSGGVDSSVAAARLVDAGHDVVGVHLALSRDPQATRESARGCCSLEDSADARRVC 61

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
            K+      W D         +        +  T N  ++  +       +     +   
Sbjct: 62  DKLGIPFYVW-DFSDRFKAEVIDNFVWSYDNGETPNPCLRCNEKIKFAALLDRALALGF- 119

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                A   G   IV        S  P      +  + T   L          P+   +K
Sbjct: 120 ----DAVATGHYAIVDDEGNLRRSADPLKDQSYVLGVLTRAELDRC-----IFPVGDTEK 170

Query: 178 YETWKLAQDIG 188
            +  + A+  G
Sbjct: 171 PQIREEAKRHG 181


>gi|222095848|ref|YP_002529905.1| asparagine synthase [Bacillus cereus Q1]
 gi|221239906|gb|ACM12616.1| asparagine synthase [Bacillus cereus Q1]
          Length = 633

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 23/60 (38%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS   S A +    + T S  + QR   E++      +K+         S  E 
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKEF 322


>gi|218132958|ref|ZP_03461762.1| hypothetical protein BACPEC_00819 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991831|gb|EEC57835.1| hypothetical protein BACPEC_00819 [Bacteroides pectinophilus ATCC
           43243]
          Length = 411

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 65/219 (29%), Gaps = 27/219 (12%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVE-LECRLCVRK 58
           M DII      +L +SGG D++  + W  + F   V  +  D GQ  ++  L+ R     
Sbjct: 1   MEDII-MKEKVILAYSGGLDTTAIIPWLKENFDYEVICVCADCGQEEELNGLDERAKSCG 59

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
                +    D+  ED+I+P          +        +   ++    +  R +     
Sbjct: 60  ASKLYIEDLTDTFAEDYIVP-------CVQAHAVYEDKYLLGTSMARPAIAKRLVEIARK 112

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
               A   G T         + +         I A                       + 
Sbjct: 113 EGASAICHGATGKGNDQVRFELAIKALAPDIKIIAPWRND------------KWTLKSRE 160

Query: 179 ETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
           +  +  +  G    +NL     ++ Y   R+  +    G
Sbjct: 161 DEIEYCRQHG----INLPFSADNS-YSRDRNLWHISHEG 194


>gi|196039995|ref|ZP_03107298.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus
           NVH0597-99]
 gi|196029254|gb|EDX67858.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus
           NVH0597-99]
          Length = 633

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 23/60 (38%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS   S A +    + T S  + QR   E++      +K+         S  E 
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKEF 322


>gi|167737225|ref|ZP_02409999.1| putative asparagine synthase (glutamine-hydrolyzing) [Burkholderia
           pseudomallei 14]
          Length = 370

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 33/86 (38%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           ++FSGG DS+  L  A      V  +SF     N +E+  R C    I  ++  +     
Sbjct: 233 VMFSGGIDSAIVLRLAHRYHPDVTAISFGLPGSNDIEIAHRYCAEHGIRHVIYTFTKQDL 292

Query: 73  EDHILPLAILGDISHSSLTKNVAMKI 98
            ++I      G+        + A+  
Sbjct: 293 LENIDDAVYYGEFFEKIDAIDSAIAH 318


>gi|331092502|ref|ZP_08341324.1| hypothetical protein HMPREF9477_01967 [Lachnospiraceae bacterium
          2_1_46FAA]
 gi|330400723|gb|EGG80326.1| hypothetical protein HMPREF9477_01967 [Lachnospiraceae bacterium
          2_1_46FAA]
          Length = 470

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/76 (13%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDR----FDRVETLSFDY---GQRNKVELECRLC 55
          +++ KA   ++  SGG DS   L   ++        +  +  ++   G+  + + +    
Sbjct: 13 EMLNKADKVVVGVSGGADSVCLLFVLMELQKTIGFDIIVVHVNHLLRGEDAESDEKYVRE 72

Query: 56 VRKKIVELMPKWKDSL 71
          + +K       +++++
Sbjct: 73 LCEKYHLTCEVYRENV 88


>gi|326405707|gb|ADZ62778.1| argininosuccinate synthase [Lactococcus lactis subsp. lactis
          CV56]
          Length = 398

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 17/39 (43%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +      +L +SGG D+S  + W  D+   V     D G
Sbjct: 1  MMGNKKIVLAYSGGLDTSVAVKWLTDKGFDVIAACMDVG 39


>gi|332652754|ref|ZP_08418499.1| argininosuccinate synthase [Ruminococcaceae bacterium D16]
 gi|332517900|gb|EGJ47503.1| argininosuccinate synthase [Ruminococcaceae bacterium D16]
          Length = 405

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 52/159 (32%), Gaps = 11/159 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +    +L +SGG D+S  + W  + ++   +  ++ D GQ +++E      ++    +
Sbjct: 1   MSEIKKVVLAYSGGLDTSIIIPWLKENYNNPEIIAVAADVGQGDELEGLEEKAIKTGASK 60

Query: 63  LM-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           L      D + +D I+P  ++G              +         +  R +        
Sbjct: 61  LYIEDLTDEMVDDVIVPSMMMGAKY--------EEYLLGTAFARPIIAKRLVEIAKKEGA 112

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
            A   G T         +           I A     ++
Sbjct: 113 DAICHGCTGKGNDQVRFELGIKRFAPEMKIIAPWREWDI 151


>gi|299139448|ref|ZP_07032623.1| GMP synthase, large subunit [Acidobacterium sp. MP5ACTX8]
 gi|298598717|gb|EFI54880.1| GMP synthase, large subunit [Acidobacterium sp. MP5ACTX8]
          Length = 523

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 55/189 (29%), Gaps = 20/189 (10%)

Query: 11  ALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A+   SGG DSS      A    DR+  +  + G            V +K  +   K + 
Sbjct: 221 AICGLSGGVDSSVAAVLVARAIGDRLTCIFVNNG------------VLRK--DEFAKVQK 266

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++ E+  L +  +                +                       A +    
Sbjct: 267 TMREELKLNVVAVDASERFLGKLAGVTDPEKKRKIIGNEFISVFDDEAKKIFEAEKSSGE 326

Query: 130 NIVIGVCETDY-----SGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            I   V  T Y     S         I++      L  +  + +  PL  L K E  ++ 
Sbjct: 327 EIAWLVQGTLYPDVIESASVHGPSHVIKSHHNVGGLPEDMKLKLIEPLRDLFKDEVRRIG 386

Query: 185 QDIGGQDLV 193
           +D+   + +
Sbjct: 387 RDLDMPEEI 395


>gi|281490604|ref|YP_003352584.1| argininosuccinate synthase [Lactococcus lactis subsp. lactis
          KF147]
 gi|281374410|gb|ADA63939.1| Argininosuccinate synthase [Lactococcus lactis subsp. lactis
          KF147]
          Length = 398

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 17/39 (43%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +      +L +SGG D+S  + W  D+   V     D G
Sbjct: 1  MMGNKKIVLAYSGGLDTSVAVKWLTDKGFDVIAACMDVG 39


>gi|152993480|ref|YP_001359201.1| GMP synthase [Sulfurovum sp. NBC37-1]
 gi|226739756|sp|A6QBI5|GUAA_SULNB RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|151425341|dbj|BAF72844.1| GMP synthase (glutamine-hydrolyzing) [Sulfurovum sp. NBC37-1]
          Length = 513

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 51/189 (26%), Gaps = 20/189 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               L   SGG DSS   +   +    +++  +  D G   K E        +++ ++  
Sbjct: 216 EKKVLCGVSGGVDSSVVAAMLHEALPKEQLICVFVDQGLLRKDE-------AEQVQDMFK 268

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                L                 +L      + +   +   F+   +             
Sbjct: 269 LLDIPLIT------IDAKKEFMEALAGVTDPEQKRKAIGEKFIEVFDKEAGKHTDVSFLA 322

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G         +   S        TI++      L       +  PL  + K E  KL  
Sbjct: 323 QG-----TLYTDVIESVSVKGPSKTIKSHHNVGGLPDWMTFELVEPLREIFKDEVRKLGL 377

Query: 186 DIGGQDLVN 194
           ++G    + 
Sbjct: 378 ELGLPKHMI 386


>gi|125623017|ref|YP_001031500.1| argininosuccinate synthase [Lactococcus lactis subsp. cremoris
          MG1363]
 gi|124491825|emb|CAL96745.1| ArgG protein [Lactococcus lactis subsp. cremoris MG1363]
          Length = 398

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 17/39 (43%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +      +L +SGG D+S  + W  D+   V     D G
Sbjct: 1  MMGNKKIVLAYSGGLDTSVAVKWLTDKGFDVIAACMDVG 39


>gi|118586895|ref|ZP_01544328.1| GMP synthase [Oenococcus oeni ATCC BAA-1163]
 gi|118432622|gb|EAV39355.1| GMP synthase [Oenococcus oeni ATCC BAA-1163]
          Length = 531

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 53/187 (28%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS            ++  +  D+G                   L+ K
Sbjct: 236 NKKVLLGLSGGVDSSVVAVLLHKAIGRQLTCIFVDHG-------------------LLRK 276

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +  L  + +     L  I   +  + +      +                F        
Sbjct: 277 NEAKLVMESLAGKFGLNIIKVDAQKRFLDKLEGISEPEQKRKIIGKEFIETFNDEAKKLD 336

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI  +  G   TD          TI++      L  E H  +  PL  L K E  KL ++
Sbjct: 337 GIDFLAQGTLYTDVIESGTDTAQTIKSHHNVGGLPKEMHFKLIEPLRTLFKDEARKLGEE 396

Query: 187 IGGQDLV 193
           +     +
Sbjct: 397 MQMPHAL 403


>gi|94501253|ref|ZP_01307775.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Oceanobacter sp. RED65]
 gi|94426680|gb|EAT11666.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Oceanobacter sp. RED65]
          Length = 524

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 53/183 (28%), Gaps = 19/183 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELEC-RLCVRKKIVELMPKW 67
             LL  SGG DSS   +       D++  +  D G   K E +       K +   + + 
Sbjct: 228 KVLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRKNEGDMVMDMFAKNMGVKVIRA 287

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    L L  L  I      + V      +         + + FL           
Sbjct: 288 DAED-----LFLGKLNGIDDPEKKRKVIGNTFIDVFDEEAGKIKEVDFLAQGTIY----- 337

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                      + +     +   I++      L  +  + +  PL  L K E  K+  ++
Sbjct: 338 -------PDVIESAASKTGKAHVIKSHHNVGGLPDDMKMELVEPLRELFKDEVRKIGLEL 390

Query: 188 GGQ 190
           G  
Sbjct: 391 GLP 393


>gi|116491142|ref|YP_810686.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Oenococcus oeni PSU-1]
 gi|290890653|ref|ZP_06553723.1| hypothetical protein AWRIB429_1113 [Oenococcus oeni AWRIB429]
 gi|116091867|gb|ABJ57021.1| GMP synthase (glutamine-hydrolyzing) [Oenococcus oeni PSU-1]
 gi|290479628|gb|EFD88282.1| hypothetical protein AWRIB429_1113 [Oenococcus oeni AWRIB429]
          Length = 517

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 53/187 (28%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS            ++  +  D+G                   L+ K
Sbjct: 222 NKKVLLGLSGGVDSSVVAVLLHKAIGRQLTCIFVDHG-------------------LLRK 262

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +  L  + +     L  I   +  + +      +                F        
Sbjct: 263 NEAKLVMESLAGKFGLNIIKVDAQKRFLDKLEGISEPEQKRKIIGKEFIETFNDEAKKLD 322

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI  +  G   TD          TI++      L  E H  +  PL  L K E  KL ++
Sbjct: 323 GIDFLAQGTLYTDVIESGTDTAQTIKSHHNVGGLPKEMHFKLIEPLRTLFKDEARKLGEE 382

Query: 187 IGGQDLV 193
           +     +
Sbjct: 383 MQMPHAL 389


>gi|30262264|ref|NP_844641.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
           str. Ames]
 gi|47527548|ref|YP_018897.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
           str. 'Ames Ancestor']
 gi|47565607|ref|ZP_00236647.1| asparagine synthase (glutamine-hydrolyzing) [Bacillus cereus G9241]
 gi|49185106|ref|YP_028358.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
           str. Sterne]
 gi|49477576|ref|YP_036364.1| asparagine synthase [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|52143206|ref|YP_083625.1| asparagine synthase [Bacillus cereus E33L]
 gi|65319555|ref|ZP_00392514.1| COG0367: Asparagine synthase (glutamine-hydrolyzing) [Bacillus
           anthracis str. A2012]
 gi|118477681|ref|YP_894832.1| asparagine synthase [Bacillus thuringiensis str. Al Hakam]
 gi|165870479|ref|ZP_02215133.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
           str. A0488]
 gi|167632925|ref|ZP_02391251.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
           str. A0442]
 gi|170687008|ref|ZP_02878227.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
           str. A0465]
 gi|170706674|ref|ZP_02897133.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
           str. A0389]
 gi|177649230|ref|ZP_02932232.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
           str. A0174]
 gi|196033797|ref|ZP_03101208.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus W]
 gi|206971613|ref|ZP_03232563.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus
           AH1134]
 gi|217959762|ref|YP_002338314.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus
           AH187]
 gi|218231565|ref|YP_002366950.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus
           B4264]
 gi|218903392|ref|YP_002451226.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus
           AH820]
 gi|225864230|ref|YP_002749608.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus
           03BB102]
 gi|227814934|ref|YP_002814943.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
           str. CDC 684]
 gi|228914852|ref|ZP_04078459.1| Asparagine synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228920963|ref|ZP_04084300.1| Asparagine synthetase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|228927318|ref|ZP_04090378.1| Asparagine synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228933557|ref|ZP_04096407.1| Asparagine synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228945871|ref|ZP_04108214.1| Asparagine synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228952591|ref|ZP_04114667.1| Asparagine synthetase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|228958519|ref|ZP_04120239.1| Asparagine synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229043995|ref|ZP_04191685.1| Asparagine synthetase [Bacillus cereus AH676]
 gi|229069779|ref|ZP_04203062.1| Asparagine synthetase [Bacillus cereus F65185]
 gi|229079420|ref|ZP_04211961.1| Asparagine synthetase [Bacillus cereus Rock4-2]
 gi|229091243|ref|ZP_04222462.1| Asparagine synthetase [Bacillus cereus Rock3-42]
 gi|229109692|ref|ZP_04239278.1| Asparagine synthetase [Bacillus cereus Rock1-15]
 gi|229121805|ref|ZP_04251025.1| Asparagine synthetase [Bacillus cereus 95/8201]
 gi|229127649|ref|ZP_04256638.1| Asparagine synthetase [Bacillus cereus BDRD-Cer4]
 gi|229138955|ref|ZP_04267533.1| Asparagine synthetase [Bacillus cereus BDRD-ST26]
 gi|229144845|ref|ZP_04273242.1| Asparagine synthetase [Bacillus cereus BDRD-ST24]
 gi|229150475|ref|ZP_04278691.1| Asparagine synthetase [Bacillus cereus m1550]
 gi|229155836|ref|ZP_04283938.1| Asparagine synthetase [Bacillus cereus ATCC 4342]
 gi|229178619|ref|ZP_04305983.1| Asparagine synthetase [Bacillus cereus 172560W]
 gi|229184479|ref|ZP_04311683.1| Asparagine synthetase [Bacillus cereus BGSC 6E1]
 gi|229190335|ref|ZP_04317336.1| Asparagine synthetase [Bacillus cereus ATCC 10876]
 gi|229196476|ref|ZP_04323220.1| Asparagine synthetase [Bacillus cereus m1293]
 gi|229604667|ref|YP_002866604.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
           str. A0248]
 gi|254684832|ref|ZP_05148692.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
           str. CNEVA-9066]
 gi|254722240|ref|ZP_05184028.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
           str. A1055]
 gi|254743535|ref|ZP_05201220.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
           str. Kruger B]
 gi|254751594|ref|ZP_05203631.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
           str. Vollum]
 gi|296502816|ref|YP_003664516.1| asparagine synthetase [Bacillus thuringiensis BMB171]
 gi|30256895|gb|AAP26127.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
           str. Ames]
 gi|47502696|gb|AAT31372.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
           str. 'Ames Ancestor']
 gi|47557243|gb|EAL15571.1| asparagine synthase (glutamine-hydrolyzing) [Bacillus cereus G9241]
 gi|49179033|gb|AAT54409.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
           str. Sterne]
 gi|49329132|gb|AAT59778.1| asparagine synthase [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|51976675|gb|AAU18225.1| asparagine synthase [Bacillus cereus E33L]
 gi|118416906|gb|ABK85325.1| asparagine synthase [Bacillus thuringiensis str. Al Hakam]
 gi|164713634|gb|EDR19157.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
           str. A0488]
 gi|167531737|gb|EDR94402.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
           str. A0442]
 gi|170128405|gb|EDS97273.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
           str. A0389]
 gi|170669059|gb|EDT19803.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
           str. A0465]
 gi|172084304|gb|EDT69362.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
           str. A0174]
 gi|195993477|gb|EDX57434.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus W]
 gi|206733598|gb|EDZ50770.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus
           AH1134]
 gi|217063627|gb|ACJ77877.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus
           AH187]
 gi|218159522|gb|ACK59514.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus
           B4264]
 gi|218538771|gb|ACK91169.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus
           AH820]
 gi|225787390|gb|ACO27607.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus
           03BB102]
 gi|227006390|gb|ACP16133.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
           str. CDC 684]
 gi|228586832|gb|EEK44906.1| Asparagine synthetase [Bacillus cereus m1293]
 gi|228593119|gb|EEK50937.1| Asparagine synthetase [Bacillus cereus ATCC 10876]
 gi|228598979|gb|EEK56595.1| Asparagine synthetase [Bacillus cereus BGSC 6E1]
 gi|228604777|gb|EEK62234.1| Asparagine synthetase [Bacillus cereus 172560W]
 gi|228627634|gb|EEK84359.1| Asparagine synthetase [Bacillus cereus ATCC 4342]
 gi|228632968|gb|EEK89581.1| Asparagine synthetase [Bacillus cereus m1550]
 gi|228638567|gb|EEK95000.1| Asparagine synthetase [Bacillus cereus BDRD-ST24]
 gi|228644495|gb|EEL00749.1| Asparagine synthetase [Bacillus cereus BDRD-ST26]
 gi|228655726|gb|EEL11575.1| Asparagine synthetase [Bacillus cereus BDRD-Cer4]
 gi|228661594|gb|EEL17214.1| Asparagine synthetase [Bacillus cereus 95/8201]
 gi|228673733|gb|EEL28991.1| Asparagine synthetase [Bacillus cereus Rock1-15]
 gi|228692097|gb|EEL45837.1| Asparagine synthetase [Bacillus cereus Rock3-42]
 gi|228703877|gb|EEL56322.1| Asparagine synthetase [Bacillus cereus Rock4-2]
 gi|228713314|gb|EEL65206.1| Asparagine synthetase [Bacillus cereus F65185]
 gi|228725340|gb|EEL76607.1| Asparagine synthetase [Bacillus cereus AH676]
 gi|228801146|gb|EEM48043.1| Asparagine synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228807057|gb|EEM53600.1| Asparagine synthetase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|228813745|gb|EEM60023.1| Asparagine synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228826017|gb|EEM71800.1| Asparagine synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228832330|gb|EEM77907.1| Asparagine synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228838657|gb|EEM83961.1| Asparagine synthetase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|228844799|gb|EEM89843.1| Asparagine synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229269075|gb|ACQ50712.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
           str. A0248]
 gi|296323868|gb|ADH06796.1| asparagine synthetase [Bacillus thuringiensis BMB171]
 gi|324326286|gb|ADY21546.1| asparagine synthase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 633

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 23/60 (38%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS   S A +    + T S  + QR   E++      +K+         S  E 
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKEF 322


>gi|328756383|gb|EGF69999.1| GMP synthase protein [Propionibacterium acnes HL020PA1]
          Length = 517

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 51/183 (27%), Gaps = 16/183 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +       D++  +  D+G   + E      V+   V       
Sbjct: 219 RVICGLSGGVDSAVAAALVQRAVGDQLTCVFVDHGLLRQGE---AEQVKNDFVAATGADL 275

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E      A+ G    +       +  ++       V  R           A +   
Sbjct: 276 VVADESQRFLDALAG---VTDPETKRKIIGREFIRTFEDVAKRLN---------ADQPID 323

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +   ++  PL  L K E   +  ++G
Sbjct: 324 FLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPDDLQFSLVEPLRTLFKDEVRAVGLELG 383

Query: 189 GQD 191
             +
Sbjct: 384 LPE 386


>gi|328950432|ref|YP_004367767.1| GMP synthase (glutamine-hydrolyzing) [Marinithermus hydrothermalis
           DSM 14884]
 gi|328450756|gb|AEB11657.1| GMP synthase (glutamine-hydrolyzing) [Marinithermus hydrothermalis
           DSM 14884]
          Length = 504

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 48/188 (25%), Gaps = 19/188 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               LL  SGG DSST              +  D+G     E        K +   +   
Sbjct: 210 EERVLLAVSGGVDSSTLALLLARAGVDHVAVFVDHGLLRLGERAEVEHALKPLGVNLVTV 269

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             S           L  +   +  +     I    +       R +    F A       
Sbjct: 270 DAS--------ERFLAALEGVTDPEAKRKIIGREFVEVFKEKARELGPFTFLA------- 314

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                  +               I++      L  +    +  P  +L K E  +LA  +
Sbjct: 315 ----QGTLYPDVIESAGGAGAANIKSHHNVGGLPKDLGFELLEPFRYLFKDEVRELALLL 370

Query: 188 GGQDLVNL 195
           G  D + L
Sbjct: 371 GLPDTIRL 378


>gi|327325596|gb|EGE67395.1| GMP synthase [Propionibacterium acnes HL103PA1]
          Length = 517

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 51/183 (27%), Gaps = 16/183 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +       D++  +  D+G   + E      V+   V       
Sbjct: 219 RVICGLSGGVDSAVAAALVQRAVGDQLTCVFVDHGLLRQGE---AEQVKNDFVAATGADL 275

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E      A+ G    +       +  ++       V  R           A +   
Sbjct: 276 VVADESQRFLDALAG---VTDPETKRKIIGREFIRTFEDVAKRLN---------ADQPID 323

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +   ++  PL  L K E   +  ++G
Sbjct: 324 FLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPDDLQFSLVEPLRTLFKDEVRAVGLELG 383

Query: 189 GQD 191
             +
Sbjct: 384 LPE 386


>gi|314924249|gb|EFS88080.1| GMP synthase protein [Propionibacterium acnes HL001PA1]
 gi|314982160|gb|EFT26253.1| GMP synthase protein [Propionibacterium acnes HL110PA3]
 gi|315090391|gb|EFT62367.1| GMP synthase protein [Propionibacterium acnes HL110PA4]
 gi|315093777|gb|EFT65753.1| GMP synthase protein [Propionibacterium acnes HL060PA1]
 gi|315103896|gb|EFT75872.1| GMP synthase protein [Propionibacterium acnes HL050PA2]
          Length = 517

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 51/183 (27%), Gaps = 16/183 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +       D++  +  D+G   + E      V+   V       
Sbjct: 219 RVICGLSGGVDSAVAAALVQRAVGDQLTCVFVDHGLLRQGE---AEQVKNDFVAATGADL 275

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E      A+ G    +       +  ++       V  R           A +   
Sbjct: 276 VVADESQRFLDALAG---VTDPETKRKIIGREFIRTFEDVAKRLN---------ADQPID 323

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +   ++  PL  L K E   +  ++G
Sbjct: 324 FLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPDDLQFSLVEPLRTLFKDEVRAVGLELG 383

Query: 189 GQD 191
             +
Sbjct: 384 LPE 386


>gi|313773174|gb|EFS39140.1| GMP synthase protein [Propionibacterium acnes HL074PA1]
 gi|313810468|gb|EFS48182.1| GMP synthase protein [Propionibacterium acnes HL083PA1]
 gi|313812197|gb|EFS49911.1| GMP synthase protein [Propionibacterium acnes HL025PA1]
 gi|313817918|gb|EFS55632.1| GMP synthase protein [Propionibacterium acnes HL046PA2]
 gi|313819831|gb|EFS57545.1| GMP synthase protein [Propionibacterium acnes HL036PA1]
 gi|313823321|gb|EFS61035.1| GMP synthase protein [Propionibacterium acnes HL036PA2]
 gi|313824795|gb|EFS62509.1| GMP synthase protein [Propionibacterium acnes HL063PA1]
 gi|313830153|gb|EFS67867.1| GMP synthase protein [Propionibacterium acnes HL007PA1]
 gi|313833132|gb|EFS70846.1| GMP synthase protein [Propionibacterium acnes HL056PA1]
 gi|314925824|gb|EFS89655.1| GMP synthase protein [Propionibacterium acnes HL036PA3]
 gi|314960768|gb|EFT04869.1| GMP synthase protein [Propionibacterium acnes HL002PA2]
 gi|314972998|gb|EFT17094.1| GMP synthase protein [Propionibacterium acnes HL053PA1]
 gi|314975612|gb|EFT19707.1| GMP synthase protein [Propionibacterium acnes HL045PA1]
 gi|314979811|gb|EFT23905.1| GMP synthase protein [Propionibacterium acnes HL072PA2]
 gi|314984804|gb|EFT28896.1| GMP synthase protein [Propionibacterium acnes HL005PA1]
 gi|314986155|gb|EFT30247.1| GMP synthase protein [Propionibacterium acnes HL005PA2]
 gi|314988768|gb|EFT32859.1| GMP synthase protein [Propionibacterium acnes HL005PA3]
 gi|315079971|gb|EFT51947.1| GMP synthase protein [Propionibacterium acnes HL078PA1]
 gi|315083298|gb|EFT55274.1| GMP synthase protein [Propionibacterium acnes HL027PA2]
 gi|315086929|gb|EFT58905.1| GMP synthase protein [Propionibacterium acnes HL002PA3]
 gi|315090020|gb|EFT61996.1| GMP synthase protein [Propionibacterium acnes HL072PA1]
 gi|315096658|gb|EFT68634.1| GMP synthase protein [Propionibacterium acnes HL038PA1]
 gi|327325073|gb|EGE66879.1| GMP synthase [Propionibacterium acnes HL096PA3]
 gi|327325300|gb|EGE67105.1| GMP synthase [Propionibacterium acnes HL096PA2]
 gi|327444103|gb|EGE90757.1| GMP synthase protein [Propionibacterium acnes HL043PA1]
 gi|327447533|gb|EGE94187.1| GMP synthase protein [Propionibacterium acnes HL043PA2]
 gi|327449272|gb|EGE95926.1| GMP synthase protein [Propionibacterium acnes HL013PA2]
 gi|328761283|gb|EGF74810.1| GMP synthase [Propionibacterium acnes HL099PA1]
 gi|332676163|gb|AEE72979.1| GMP synthase (glutamine-hydrolyzing) [Propionibacterium acnes 266]
          Length = 517

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 51/183 (27%), Gaps = 16/183 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +       D++  +  D+G   + E      V+   V       
Sbjct: 219 RVICGLSGGVDSAVAAALVQRAVGDQLTCVFVDHGLLRQGE---AEQVKNDFVAATGADL 275

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E      A+ G    +       +  ++       V  R           A +   
Sbjct: 276 VVADESQRFLDALAG---VTDPETKRKIIGREFIRTFEDVAKRLN---------ADQPID 323

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +   ++  PL  L K E   +  ++G
Sbjct: 324 FLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPDDLQFSLVEPLRTLFKDEVRAVGLELG 383

Query: 189 GQD 191
             +
Sbjct: 384 LPE 386


>gi|293977833|ref|YP_003543263.1| argininosuccinate synthase [Candidatus Sulcia muelleri DMIN]
 gi|292667764|gb|ADE35399.1| Argininosuccinate synthase [Candidatus Sulcia muelleri DMIN]
          Length = 579

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 27/61 (44%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + K    LL +SGG D+S CL +  +   +V T+  + G  N  +LE        I  + 
Sbjct: 183 LNKGDKILLAYSGGLDTSYCLKYLTNEGYKVITIIINTGVFNNKDLESIEKRALNIGAIS 242

Query: 65  P 65
            
Sbjct: 243 H 243


>gi|282855107|ref|ZP_06264439.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Propionibacterium acnes J139]
 gi|282581695|gb|EFB87080.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Propionibacterium acnes J139]
          Length = 524

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 51/183 (27%), Gaps = 16/183 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +       D++  +  D+G   + E      V+   V       
Sbjct: 226 RVICGLSGGVDSAVAAALVQRAVGDQLTCVFVDHGLLRQGE---AEQVKNDFVAATGADL 282

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E      A+ G    +       +  ++       V  R           A +   
Sbjct: 283 VVADESQRFLDALAG---VTDPETKRKIIGREFIRTFEDVAKRLN---------ADQPID 330

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +   ++  PL  L K E   +  ++G
Sbjct: 331 FLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPDDLQFSLVEPLRTLFKDEVRAVGLELG 390

Query: 189 GQD 191
             +
Sbjct: 391 LPE 393


>gi|228985341|ref|ZP_04145501.1| Asparagine synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|228774397|gb|EEM22803.1| Asparagine synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 633

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 23/60 (38%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS   S A +    + T S  + QR   E++      +K+         S  E 
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKEF 322


>gi|289427690|ref|ZP_06429402.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Propionibacterium acnes J165]
 gi|295131290|ref|YP_003581953.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Propionibacterium acnes SK137]
 gi|289159181|gb|EFD07373.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Propionibacterium acnes J165]
 gi|291375776|gb|ADD99630.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Propionibacterium acnes SK137]
          Length = 524

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 51/183 (27%), Gaps = 16/183 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +       D++  +  D+G   + E      V+   V       
Sbjct: 226 RVICGLSGGVDSAVAAALVQRAVGDQLTCVFVDHGLLRQGE---AEQVKNDFVAATGADL 282

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E      A+ G    +       +  ++       V  R           A +   
Sbjct: 283 VVADESQRFLDALAG---VTDPETKRKIIGREFIRTFEDVAKRLN---------ADQPID 330

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +   ++  PL  L K E   +  ++G
Sbjct: 331 FLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPDDLQFSLVEPLRTLFKDEVRAVGLELG 390

Query: 189 GQD 191
             +
Sbjct: 391 LPE 393


>gi|169832363|ref|YP_001718345.1| ExsB family protein [Candidatus Desulforudis audaxviator MP104C]
 gi|169639207|gb|ACA60713.1| ExsB family protein [Candidatus Desulforudis audaxviator MP104C]
          Length = 265

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 1/64 (1%)

Query: 2  NDIIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKI 60
            IIKK    ++  SGG DS+T L  A +   +RV   +   G   + +L+    +   +
Sbjct: 9  RAIIKKLGGVVVALSGGVDSATVLCLAREVLGERVAAATAVAGIHARADLQRARALAALL 68

Query: 61 VELM 64
              
Sbjct: 69 GVRH 72


>gi|218897219|ref|YP_002445630.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus
           G9842]
 gi|228900842|ref|ZP_04065057.1| Asparagine synthetase [Bacillus thuringiensis IBL 4222]
 gi|218541280|gb|ACK93674.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus
           G9842]
 gi|228858768|gb|EEN03213.1| Asparagine synthetase [Bacillus thuringiensis IBL 4222]
          Length = 633

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 23/60 (38%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS   S A +    + T S  + QR   E++      +K+         S  E 
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKEF 322


>gi|157157765|ref|YP_001463830.1| GMP synthase [Escherichia coli E24377A]
 gi|300927130|ref|ZP_07142878.1| GMP synthase protein [Escherichia coli MS 182-1]
 gi|301330403|ref|ZP_07223044.1| GMP synthase protein [Escherichia coli MS 78-1]
 gi|226738440|sp|A7ZPV1|GUAA_ECO24 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|157079795|gb|ABV19503.1| GMP synthase (glutamine-hydrolyzing) [Escherichia coli E24377A]
 gi|300416900|gb|EFK00211.1| GMP synthase protein [Escherichia coli MS 182-1]
 gi|300843613|gb|EFK71373.1| GMP synthase protein [Escherichia coli MS 78-1]
          Length = 525

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 46/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G     E      V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLSE---AEQVLDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|292900165|ref|YP_003539534.1| GMP synthase [Erwinia amylovora ATCC 49946]
 gi|291200013|emb|CBJ47138.1| GMP synthase (glutamine-hydrolyzing) [Erwinia amylovora ATCC 49946]
          Length = 526

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 51/184 (27%), Gaps = 17/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS           DR+  +  D G    + +     V +   +     
Sbjct: 229 DKVILGLSGGVDSSVTAMLLHRAIGDRLTCVFVDNG---LLRMNEAEQVMEMFGDHFGLN 285

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  ++    A+ G     +  K +     +                           
Sbjct: 286 IIHVPAENRFLDALAGTDEPEAKRKIIGRVFVEVFDEEATKLT-------------EVKW 332

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +    I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 333 LAQGTIYPDVIESAASATGKAHVIKSHHNVGGLPKEMKLGLVEPLKELFKDEVRKIGLEL 392

Query: 188 GGQD 191
           G   
Sbjct: 393 GLPH 396


>gi|229161228|ref|ZP_04289215.1| Asparagine synthetase [Bacillus cereus R309803]
 gi|228622324|gb|EEK79163.1| Asparagine synthetase [Bacillus cereus R309803]
          Length = 633

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 23/60 (38%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS   S A +    + T S  + QR   E++      +K+         S  E 
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKEF 322


>gi|159044136|ref|YP_001532930.1| GMP synthase [Dinoroseobacter shibae DFL 12]
 gi|226738439|sp|A8LKW5|GUAA_DINSH RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|157911896|gb|ABV93329.1| GMP synthase [Dinoroseobacter shibae DFL 12]
          Length = 520

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 55/182 (30%), Gaps = 17/182 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS       +   +++  +  D+G   K E        +++V +     
Sbjct: 224 KVICALSGGVDSSVAAVLIHEAIGEQLTCVFVDHGLLRKNE-------AQEVVTMFR--- 273

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E + LPL    +        +     +        +              A  L  
Sbjct: 274 ----EHYNLPLIHADETELFLSALDGQSDPETKRKIIGKLFIDVFEAKAKEIGGADFLAQ 329

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+    +      TI++      L  +  + +  PL  L K E   L  ++G
Sbjct: 330 GTLYPDVIESV--SFSGGPSVTIKSHHNVGGLPEKMGMKLVEPLRELFKDEVRALGHELG 387

Query: 189 GQ 190
             
Sbjct: 388 LP 389


>gi|150019326|ref|YP_001311580.1| argininosuccinate synthase [Clostridium beijerinckii NCIMB 8052]
 gi|187470627|sp|A6M1Z4|ASSY_CLOB8 RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|149905791|gb|ABR36624.1| Argininosuccinate synthase [Clostridium beijerinckii NCIMB 8052]
          Length = 407

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 49/158 (31%), Gaps = 9/158 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + K    +L +SGG D+S  + W  +     V  +  + GQ+++++      ++    +L
Sbjct: 1   MIKYNKVVLAYSGGLDTSIIIPWLKENYGCEVIAVCGNVGQKDELDGLEEKAIKTGASKL 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     +D+I P    G I            +   +     +  R +         
Sbjct: 61  YIEDLTQEFVDDYIFPTIQAGAIYEG-------KYLLGTSFARPIIGKRLVEIAKAEGAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         + +         I A     ++
Sbjct: 114 AICHGCTGKGNDQVRFEMAVKAFAPEMPIIAPWRIWDI 151


>gi|312136982|ref|YP_004004319.1| tRNA methyl transferase [Methanothermus fervidus DSM 2088]
 gi|311224701|gb|ADP77557.1| tRNA methyl transferase [Methanothermus fervidus DSM 2088]
          Length = 338

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 23/68 (33%), Gaps = 2/68 (2%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               L+  SGG DSS  L         VE ++ D G    +  +      +K+   +   
Sbjct: 131 NEKVLVALSGGVDSSFSLVVMKYLGFDVEAVTVDPG--PMILPKIFKKNIEKLCSTLEVK 188

Query: 68  KDSLGEDH 75
              +  D 
Sbjct: 189 HKYIKTDF 196


>gi|310644302|ref|YP_003949061.1| argininosuccinate synthase [Paenibacillus polymyxa SC2]
 gi|309249253|gb|ADO58820.1| Argininosuccinate synthase [Paenibacillus polymyxa SC2]
          Length = 411

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVR 57
              +L +SGG D+S  L W  + +D  +   + D GQ+ +++      + 
Sbjct: 3  KEKIVLAYSGGLDTSVILKWLKETYDAEIIAFTADIGQKEELDGLEEKALA 53


>gi|310658245|ref|YP_003935966.1| trnaile lysidine synthetase [Clostridium sticklandii DSM 519]
 gi|308825023|emb|CBH21061.1| tRNAile lysidine synthetase [Clostridium sticklandii]
          Length = 464

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 49/198 (24%), Gaps = 28/198 (14%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYGQRNKVELECRLCVR 57
           ++I+     L+  SGG DS  CL  AL +       ++     ++  R     +  L   
Sbjct: 14  NLIENKDKILVALSGGPDS-VCLLHALKKLETYYNIKIYAAHLNHKIRGIEAQKDALYAA 72

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           K   EL               +                    +             +   
Sbjct: 73  KLCDEL--------------DVPFFVKAIDVPAYAKEKKMTLEEAARKLRYDMLFEVK-- 116

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                  R+G   I +     D +     R      I     +  +    V  PLM + K
Sbjct: 117 ------NRIGAKKIAVAHNLDDQAETVIMRLIRGTGITGLKGMDYKRGDGVIRPLMDISK 170

Query: 178 YETWKLAQDIGGQDLVNL 195
                   +      ++ 
Sbjct: 171 ANIVSYCDENKLNPRIDY 188


>gi|308071071|ref|YP_003872676.1| argininosuccinate synthase (Citrulline--aspartate ligase)
          [Paenibacillus polymyxa E681]
 gi|305860350|gb|ADM72138.1| Argininosuccinate synthase (Citrulline--aspartate ligase)
          [Paenibacillus polymyxa E681]
          Length = 411

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVR 57
              +L +SGG D+S  L W  + +D  +   + D GQ+ +++      + 
Sbjct: 3  KEKIVLAYSGGLDTSVILKWLKETYDAEIIAFTADIGQKEELDGLEEKALA 53


>gi|300113744|ref|YP_003760319.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Nitrosococcus watsonii C-113]
 gi|299539681|gb|ADJ27998.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Nitrosococcus watsonii C-113]
          Length = 391

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 32/151 (21%), Gaps = 5/151 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             P  ++  SGG DSS        +   +  L          E EC   V +   +    
Sbjct: 26  NKPKVVVGLSGGVDSSVAALRLQQQGYPISGLFMKNWVDFADESEC--TVAQDKKDAQAV 83

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   H        +         +             +  R  I        A  L
Sbjct: 84  TSLLGISFH--EANFAIEYWDRVFRYFLEEYRLGRTPNPDILCNRE-IKFKTFLDHALAL 140

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETA 157
           G T I  G            R    R     
Sbjct: 141 GNTLIATGHYARIDQQEGRYRLLKGRDKNKD 171


>gi|229027910|ref|ZP_04184065.1| tRNA(Ile)-lysidine synthase [Bacillus cereus AH1271]
 gi|228733424|gb|EEL84251.1| tRNA(Ile)-lysidine synthase [Bacillus cereus AH1271]
          Length = 480

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 23/195 (11%), Positives = 53/195 (27%), Gaps = 21/195 (10%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D++K+  + ++  SGG DS   L + L++             R   + E  +     +  
Sbjct: 21  DVLKEHSTIVVGVSGGPDSLALLYYLLEK-------------RAAKQFEIVVAHVDHMFR 67

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                 D   ED      +   +     T  + +                     F   +
Sbjct: 68  -----GDESHEDLQFVQDLCKGLGVICETIRINVSQYQQQYGMNAQVAARECRYAFLERI 122

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKKYE 179
             +     + +G    D       R       +    + ++       +  PL+ + K E
Sbjct: 123 MKKYDARYVALGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGYLIRPLLGVTKEE 182

Query: 180 TWKLAQDIGGQDLVN 194
                  +     ++
Sbjct: 183 IVDYCNKLKIIPRID 197


>gi|146340154|ref|YP_001205202.1| GMP synthase [Bradyrhizobium sp. ORS278]
 gi|226738392|sp|A4YSU1|GUAA_BRASO RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|146192960|emb|CAL76967.1| GMP synthase [glutamine-hydrolyzing] (Glutamine amidotransferase)
           (GMP synthetase) [Bradyrhizobium sp. ORS278]
          Length = 535

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 55/183 (30%), Gaps = 17/183 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+       +   D++  +  D+G     E        + +V+L     
Sbjct: 239 KVICGLSGGVDSAVAAVLIHEAIGDQLTCVFVDHGLLRLNE-------AETVVDLFRHHY 291

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +            LG+++            +        +              A  L  
Sbjct: 292 NIPLVHVDASKLFLGELAGV-------TDPEAKRKTIGRLFIDVFEAEAKKIGGADFLAQ 344

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+    +      TI++      L    ++ +  PL  L K E   L +++G
Sbjct: 345 GTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPARMNMKLVEPLRELFKDEVRVLGRELG 402

Query: 189 GQD 191
             D
Sbjct: 403 LPD 405


>gi|134298029|ref|YP_001111525.1| PP-loop domain-containing protein [Desulfotomaculum reducens
          MI-1]
 gi|134050729|gb|ABO48700.1| PP-loop domain protein [Desulfotomaculum reducens MI-1]
          Length = 270

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 1/62 (1%)

Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            L+ +SGG DS+  L+ A+    D V  ++       K E+     + K++        
Sbjct: 19 KVLVAYSGGTDSAFLLAVAVQELGDNVLAVTAISPTSTKAEVAEAQQLAKELGVHHRIIH 78

Query: 69 DS 70
            
Sbjct: 79 SK 80


>gi|148653456|ref|YP_001280549.1| argininosuccinate synthase [Psychrobacter sp. PRwf-1]
 gi|172048538|sp|A5WG08|ASSY_PSYWF RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|148572540|gb|ABQ94599.1| argininosuccinate synthase [Psychrobacter sp. PRwf-1]
          Length = 411

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 43/155 (27%), Gaps = 9/155 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELM-PK 66
              +L +SGG D+S    W  D +D  V T + D GQ  +VE          I  +    
Sbjct: 10  NKIVLAYSGGLDTSIIAKWLQDTYDAEVITFTADIGQGEEVEPARAKAEAMGIKHIHIED 69

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +     D++ P+     I         ++           +  R +         A   
Sbjct: 70  LRAEFARDYVFPMFRANAIYEGEYLLGTSIARP-------LIAKRLVEIAKEHNADAISH 122

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
           G T         +             A     +L 
Sbjct: 123 GATGKGNDQVRFELGAIALAPDVKTIAPWREWDLS 157


>gi|326942415|gb|AEA18311.1| argininosuccinate synthase [Bacillus thuringiensis serovar
          chinensis CT-43]
          Length = 401

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 2  EKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 38


>gi|326799645|ref|YP_004317464.1| GMP synthase (glutamine-hydrolyzing) [Sphingobacterium sp. 21]
 gi|326550409|gb|ADZ78794.1| GMP synthase (glutamine-hydrolyzing) [Sphingobacterium sp. 21]
          Length = 516

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 54/188 (28%), Gaps = 12/188 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +    +L  SGG DSS             +  +  D G   K E E  L   K +     
Sbjct: 212 QNDHVILALSGGVDSSVAAVLLHQAIGKNLHCIFVDNGLLRKDEFEQVLDSYKHMG---- 267

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  +   L    L  ++     + +      +   +     +  +           
Sbjct: 268 -LNIKGIDAKALFYDKLKGVTDPERKRKIIGGAFIDVFDSAAHEVQQELPEGVEVKW--- 323

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           LG   I   V E+     P      I++      L     + V  PL  L K E  ++  
Sbjct: 324 LGQGTIYPDVIESVSVKGPSAT---IKSHHNVGGLPDFMKLKVVEPLNTLFKDEVRRVGA 380

Query: 186 DIGGQDLV 193
            +G   L+
Sbjct: 381 ALGIDPLI 388


>gi|324328524|gb|ADY23784.1| argininosuccinate synthase [Bacillus thuringiensis serovar
          finitimus YBT-020]
          Length = 401

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 2  EKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 38


>gi|228917274|ref|ZP_04080831.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
          pulsiensis BGSC 4CC1]
 gi|228935940|ref|ZP_04098750.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
          andalousiensis BGSC 4AW1]
 gi|228823708|gb|EEM69530.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
          andalousiensis BGSC 4AW1]
 gi|228842475|gb|EEM87566.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
          pulsiensis BGSC 4CC1]
          Length = 411

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 12 EKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48


>gi|228941810|ref|ZP_04104357.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
          berliner ATCC 10792]
 gi|228974735|ref|ZP_04135301.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
          thuringiensis str. T01001]
 gi|228981330|ref|ZP_04141630.1| Argininosuccinate synthase [Bacillus thuringiensis Bt407]
 gi|228778530|gb|EEM26797.1| Argininosuccinate synthase [Bacillus thuringiensis Bt407]
 gi|228785138|gb|EEM33151.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
          thuringiensis str. T01001]
 gi|228818022|gb|EEM64100.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
          berliner ATCC 10792]
          Length = 411

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 12 EKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48


>gi|228987879|ref|ZP_04147988.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
          tochigiensis BGSC 4Y1]
 gi|228771927|gb|EEM20384.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
          tochigiensis BGSC 4Y1]
          Length = 411

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 12 EKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48


>gi|229013835|ref|ZP_04170963.1| Argininosuccinate synthase [Bacillus mycoides DSM 2048]
 gi|228747504|gb|EEL97379.1| Argininosuccinate synthase [Bacillus mycoides DSM 2048]
          Length = 411

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 12 EKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48


>gi|229017568|ref|ZP_04174463.1| Asparagine synthetase [Bacillus cereus AH1273]
 gi|229023785|ref|ZP_04180270.1| Asparagine synthetase [Bacillus cereus AH1272]
 gi|228737470|gb|EEL87980.1| Asparagine synthetase [Bacillus cereus AH1272]
 gi|228743711|gb|EEL93816.1| Asparagine synthetase [Bacillus cereus AH1273]
          Length = 633

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 23/60 (38%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS   S A +    + T S  + QR   E++      +K+         S  E 
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSIGFEQRGFSEVDVAKETAEKLGVKNHNVFISAQEF 322


>gi|229019857|ref|ZP_04176658.1| Argininosuccinate synthase [Bacillus cereus AH1273]
 gi|229026084|ref|ZP_04182465.1| Argininosuccinate synthase [Bacillus cereus AH1272]
 gi|228735237|gb|EEL85851.1| Argininosuccinate synthase [Bacillus cereus AH1272]
 gi|228741464|gb|EEL91663.1| Argininosuccinate synthase [Bacillus cereus AH1273]
          Length = 411

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 12 EKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48


>gi|229032281|ref|ZP_04188254.1| Argininosuccinate synthase [Bacillus cereus AH1271]
 gi|228729061|gb|EEL80064.1| Argininosuccinate synthase [Bacillus cereus AH1271]
          Length = 401

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 2  EKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 38


>gi|229062317|ref|ZP_04199637.1| Argininosuccinate synthase [Bacillus cereus AH603]
 gi|228716980|gb|EEL68662.1| Argininosuccinate synthase [Bacillus cereus AH603]
          Length = 411

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 12 EKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48


>gi|229081882|ref|ZP_04214374.1| Argininosuccinate synthase [Bacillus cereus Rock4-2]
 gi|228701470|gb|EEL53964.1| Argininosuccinate synthase [Bacillus cereus Rock4-2]
          Length = 411

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 12 EKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48


>gi|229093727|ref|ZP_04224826.1| Argininosuccinate synthase [Bacillus cereus Rock3-42]
 gi|228689612|gb|EEL43420.1| Argininosuccinate synthase [Bacillus cereus Rock3-42]
          Length = 401

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 2  EKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 38


>gi|229076132|ref|ZP_04209100.1| Argininosuccinate synthase [Bacillus cereus Rock4-18]
 gi|229105258|ref|ZP_04235907.1| Argininosuccinate synthase [Bacillus cereus Rock3-28]
 gi|228678184|gb|EEL32412.1| Argininosuccinate synthase [Bacillus cereus Rock3-28]
 gi|228706995|gb|EEL59200.1| Argininosuccinate synthase [Bacillus cereus Rock4-18]
          Length = 411

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 12 EKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48


>gi|229099090|ref|ZP_04230024.1| Argininosuccinate synthase [Bacillus cereus Rock3-29]
 gi|229118120|ref|ZP_04247479.1| Argininosuccinate synthase [Bacillus cereus Rock1-3]
 gi|228665343|gb|EEL20826.1| Argininosuccinate synthase [Bacillus cereus Rock1-3]
 gi|228684318|gb|EEL38262.1| Argininosuccinate synthase [Bacillus cereus Rock3-29]
          Length = 411

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 12 EKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48


>gi|228929683|ref|ZP_04092701.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
          pondicheriensis BGSC 4BA1]
 gi|229124200|ref|ZP_04253392.1| Argininosuccinate synthase [Bacillus cereus 95/8201]
 gi|228659502|gb|EEL15150.1| Argininosuccinate synthase [Bacillus cereus 95/8201]
 gi|228830070|gb|EEM75689.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
          pondicheriensis BGSC 4BA1]
          Length = 411

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 12 EKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48


>gi|229135467|ref|ZP_04264254.1| Argininosuccinate synthase [Bacillus cereus BDRD-ST196]
 gi|228648028|gb|EEL04076.1| Argininosuccinate synthase [Bacillus cereus BDRD-ST196]
          Length = 411

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 12 EKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48


>gi|229141366|ref|ZP_04269904.1| Argininosuccinate synthase [Bacillus cereus BDRD-ST26]
 gi|228642147|gb|EEK98440.1| Argininosuccinate synthase [Bacillus cereus BDRD-ST26]
          Length = 401

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 2  EKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 38


>gi|229158237|ref|ZP_04286304.1| Argininosuccinate synthase [Bacillus cereus ATCC 4342]
 gi|228625195|gb|EEK81955.1| Argininosuccinate synthase [Bacillus cereus ATCC 4342]
          Length = 411

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 12 EKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48


>gi|229163623|ref|ZP_04291572.1| Argininosuccinate synthase [Bacillus cereus R309803]
 gi|228619873|gb|EEK76750.1| Argininosuccinate synthase [Bacillus cereus R309803]
          Length = 401

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 2  EKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 38


>gi|229169357|ref|ZP_04297067.1| Argininosuccinate synthase [Bacillus cereus AH621]
 gi|228614120|gb|EEK71235.1| Argininosuccinate synthase [Bacillus cereus AH621]
          Length = 411

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 12 EKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48


>gi|229175341|ref|ZP_04302856.1| Argininosuccinate synthase [Bacillus cereus MM3]
 gi|228608173|gb|EEK65480.1| Argininosuccinate synthase [Bacillus cereus MM3]
          Length = 411

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 12 EKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48


>gi|228954898|ref|ZP_04116918.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
          kurstaki str. T03a001]
 gi|228960898|ref|ZP_04122531.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
          pakistani str. T13001]
 gi|229048336|ref|ZP_04193904.1| Argininosuccinate synthase [Bacillus cereus AH676]
 gi|229072132|ref|ZP_04205341.1| Argininosuccinate synthase [Bacillus cereus F65185]
 gi|229129913|ref|ZP_04258879.1| Argininosuccinate synthase [Bacillus cereus BDRD-Cer4]
 gi|229147190|ref|ZP_04275548.1| Argininosuccinate synthase [Bacillus cereus BDRD-ST24]
 gi|229192833|ref|ZP_04319791.1| Argininosuccinate synthase [Bacillus cereus ATCC 10876]
 gi|228590672|gb|EEK48533.1| Argininosuccinate synthase [Bacillus cereus ATCC 10876]
 gi|228636300|gb|EEK92772.1| Argininosuccinate synthase [Bacillus cereus BDRD-ST24]
 gi|228653604|gb|EEL09476.1| Argininosuccinate synthase [Bacillus cereus BDRD-Cer4]
 gi|228711066|gb|EEL63032.1| Argininosuccinate synthase [Bacillus cereus F65185]
 gi|228723061|gb|EEL74438.1| Argininosuccinate synthase [Bacillus cereus AH676]
 gi|228798794|gb|EEM45774.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
          pakistani str. T13001]
 gi|228804887|gb|EEM51486.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
          kurstaki str. T03a001]
          Length = 411

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 12 EKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48


>gi|222098103|ref|YP_002532160.1| argininosuccinate synthase [Bacillus cereus Q1]
 gi|301056138|ref|YP_003794349.1| argininosuccinate synthase [Bacillus anthracis CI]
 gi|254807507|sp|B9J0E1|ASSY_BACCQ RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|221242161|gb|ACM14871.1| argininosuccinate synthase [Bacillus cereus Q1]
 gi|300378307|gb|ADK07211.1| argininosuccinate synthase [Bacillus cereus biovar anthracis str.
          CI]
          Length = 401

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 2  EKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 38


>gi|167771313|ref|ZP_02443366.1| hypothetical protein ANACOL_02671 [Anaerotruncus colihominis DSM
           17241]
 gi|167666564|gb|EDS10694.1| hypothetical protein ANACOL_02671 [Anaerotruncus colihominis DSM
           17241]
          Length = 406

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 51/158 (32%), Gaps = 9/158 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K     +L +SGG D+S  + W  + +   V  ++ D GQ ++++      ++    ++ 
Sbjct: 4   KTYKKVVLAYSGGLDTSVIIPWLKEHYKCEVIAVAADVGQGSELDGLREKAIKTGASKIY 63

Query: 65  -PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                ++  ++ I+P    G +            +   +     +  R +         A
Sbjct: 64  IEDLTEAFVDEFIVPTLKAGAVYEG-------KYLLGTSFARPIIAKRLVEIAKKEGADA 116

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
              G T         + +      +  I A      L 
Sbjct: 117 IAHGCTGKGNDQVRFELTIKAFAPNMDIIAPWRFWELN 154


>gi|196032963|ref|ZP_03100376.1| argininosuccinate synthase [Bacillus cereus W]
 gi|196040846|ref|ZP_03108144.1| argininosuccinate synthase [Bacillus cereus NVH0597-99]
 gi|206977157|ref|ZP_03238056.1| argininosuccinate synthase [Bacillus cereus H3081.97]
 gi|218905860|ref|YP_002453694.1| argininosuccinate synthase [Bacillus cereus AH820]
 gi|228948359|ref|ZP_04110642.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
          monterrey BGSC 4AJ1]
 gi|226729218|sp|B7JS06|ASSY_BACC0 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|195994392|gb|EDX58347.1| argininosuccinate synthase [Bacillus cereus W]
 gi|196028300|gb|EDX66909.1| argininosuccinate synthase [Bacillus cereus NVH0597-99]
 gi|206744642|gb|EDZ56050.1| argininosuccinate synthase [Bacillus cereus H3081.97]
 gi|218539076|gb|ACK91474.1| argininosuccinate synthase [Bacillus cereus AH820]
 gi|228811346|gb|EEM57684.1| Argininosuccinate synthase [Bacillus thuringiensis serovar
          monterrey BGSC 4AJ1]
          Length = 401

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 2  EKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 38


>gi|217962117|ref|YP_002340687.1| argininosuccinate synthase [Bacillus cereus AH187]
 gi|226729215|sp|B7HRS7|ASSY_BACC7 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|217066572|gb|ACJ80822.1| argininosuccinate synthase [Bacillus cereus AH187]
          Length = 401

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 2  EKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 38


>gi|163942362|ref|YP_001647246.1| argininosuccinate synthase [Bacillus weihenstephanensis KBAB4]
 gi|229889861|sp|A9VKE1|ASSY_BACWK RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|163864559|gb|ABY45618.1| Argininosuccinate synthase [Bacillus weihenstephanensis KBAB4]
          Length = 401

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 2  EKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 38


>gi|118479773|ref|YP_896924.1| argininosuccinate synthase [Bacillus thuringiensis str. Al Hakam]
 gi|229186890|ref|ZP_04314045.1| Argininosuccinate synthase [Bacillus cereus BGSC 6E1]
 gi|118418998|gb|ABK87417.1| argininosuccinate synthase [Bacillus thuringiensis str. Al Hakam]
 gi|228596627|gb|EEK54292.1| Argininosuccinate synthase [Bacillus cereus BGSC 6E1]
          Length = 411

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 12 EKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 48


>gi|52140876|ref|YP_085953.1| argininosuccinate synthase [Bacillus cereus E33L]
 gi|196043913|ref|ZP_03111150.1| argininosuccinate synthase [Bacillus cereus 03BB108]
 gi|225866612|ref|YP_002751990.1| argininosuccinate synthase [Bacillus cereus 03BB102]
 gi|68566239|sp|Q633G4|ASSY_BACCZ RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|172044116|sp|A0RJM4|ASSY_BACAH RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|254807506|sp|C1EUX9|ASSY_BACC3 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|51974345|gb|AAU15895.1| argininosuccinate synthase (citrulline-asparate ligase) [Bacillus
          cereus E33L]
 gi|196025249|gb|EDX63919.1| argininosuccinate synthase [Bacillus cereus 03BB108]
 gi|225789329|gb|ACO29546.1| argininosuccinate synthase [Bacillus cereus 03BB102]
          Length = 401

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 2  EKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 38


>gi|42783811|ref|NP_981058.1| argininosuccinate synthase [Bacillus cereus ATCC 10987]
 gi|47605388|sp|P61520|ASSY_BACC1 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|42739741|gb|AAS43666.1| argininosuccinate synthase [Bacillus cereus ATCC 10987]
          Length = 401

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 2  EKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 38


>gi|30264704|ref|NP_847081.1| argininosuccinate synthase [Bacillus anthracis str. Ames]
 gi|47530173|ref|YP_021522.1| argininosuccinate synthase [Bacillus anthracis str. 'Ames
          Ancestor']
 gi|49187522|ref|YP_030775.1| argininosuccinate synthase [Bacillus anthracis str. Sterne]
 gi|165869602|ref|ZP_02214260.1| argininosuccinate synthase [Bacillus anthracis str. A0488]
 gi|167634048|ref|ZP_02392371.1| argininosuccinate synthase [Bacillus anthracis str. A0442]
 gi|167638113|ref|ZP_02396391.1| argininosuccinate synthase [Bacillus anthracis str. A0193]
 gi|170685699|ref|ZP_02876922.1| argininosuccinate synthase [Bacillus anthracis str. A0465]
 gi|170705390|ref|ZP_02895854.1| argininosuccinate synthase [Bacillus anthracis str. A0389]
 gi|177651161|ref|ZP_02933992.1| argininosuccinate synthase [Bacillus anthracis str. A0174]
 gi|190569076|ref|ZP_03021976.1| argininosuccinate synthase [Bacillus anthracis Tsiankovskii-I]
 gi|227817420|ref|YP_002817429.1| argininosuccinate synthase [Bacillus anthracis str. CDC 684]
 gi|229601082|ref|YP_002868913.1| argininosuccinate synthase [Bacillus anthracis str. A0248]
 gi|254687441|ref|ZP_05151297.1| argininosuccinate synthase [Bacillus anthracis str. CNEVA-9066]
 gi|254725004|ref|ZP_05186787.1| argininosuccinate synthase [Bacillus anthracis str. A1055]
 gi|254736741|ref|ZP_05194447.1| argininosuccinate synthase [Bacillus anthracis str. Western North
          America USA6153]
 gi|254741778|ref|ZP_05199465.1| argininosuccinate synthase [Bacillus anthracis str. Kruger B]
 gi|254754624|ref|ZP_05206659.1| argininosuccinate synthase [Bacillus anthracis str. Vollum]
 gi|254757456|ref|ZP_05209483.1| argininosuccinate synthase [Bacillus anthracis str. Australia 94]
 gi|33300934|sp|Q81KV7|ASSY_BACAN RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|254807504|sp|C3PB97|ASSY_BACAA RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|254807505|sp|C3L9T6|ASSY_BACAC RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|30259379|gb|AAP28567.1| argininosuccinate synthase [Bacillus anthracis str. Ames]
 gi|47505321|gb|AAT33997.1| argininosuccinate synthase [Bacillus anthracis str. 'Ames
          Ancestor']
 gi|49181449|gb|AAT56825.1| argininosuccinate synthase [Bacillus anthracis str. Sterne]
 gi|164714431|gb|EDR19950.1| argininosuccinate synthase [Bacillus anthracis str. A0488]
 gi|167513930|gb|EDR89298.1| argininosuccinate synthase [Bacillus anthracis str. A0193]
 gi|167530849|gb|EDR93551.1| argininosuccinate synthase [Bacillus anthracis str. A0442]
 gi|170129515|gb|EDS98378.1| argininosuccinate synthase [Bacillus anthracis str. A0389]
 gi|170670163|gb|EDT20903.1| argininosuccinate synthase [Bacillus anthracis str. A0465]
 gi|172082987|gb|EDT68049.1| argininosuccinate synthase [Bacillus anthracis str. A0174]
 gi|190559858|gb|EDV13843.1| argininosuccinate synthase [Bacillus anthracis Tsiankovskii-I]
 gi|227002602|gb|ACP12345.1| argininosuccinate synthase [Bacillus anthracis str. CDC 684]
 gi|229265490|gb|ACQ47127.1| argininosuccinate synthase [Bacillus anthracis str. A0248]
          Length = 401

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 2  EKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 38


>gi|30022705|ref|NP_834336.1| argininosuccinate synthase [Bacillus cereus ATCC 14579]
 gi|206969614|ref|ZP_03230568.1| argininosuccinate synthase [Bacillus cereus AH1134]
 gi|218234148|ref|YP_002369424.1| argininosuccinate synthase [Bacillus cereus B4264]
 gi|229112095|ref|ZP_04241638.1| Argininosuccinate synthase [Bacillus cereus Rock1-15]
 gi|229152824|ref|ZP_04281007.1| Argininosuccinate synthase [Bacillus cereus m1550]
 gi|296505099|ref|YP_003666799.1| argininosuccinate synthase [Bacillus thuringiensis BMB171]
 gi|33300931|sp|Q817C6|ASSY_BACCR RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|226729216|sp|B7H6Y5|ASSY_BACC4 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|29898264|gb|AAP11537.1| Argininosuccinate synthase [Bacillus cereus ATCC 14579]
 gi|206735302|gb|EDZ52470.1| argininosuccinate synthase [Bacillus cereus AH1134]
 gi|218162105|gb|ACK62097.1| argininosuccinate synthase [Bacillus cereus B4264]
 gi|228630644|gb|EEK87290.1| Argininosuccinate synthase [Bacillus cereus m1550]
 gi|228671418|gb|EEL26719.1| Argininosuccinate synthase [Bacillus cereus Rock1-15]
 gi|296326151|gb|ADH09079.1| argininosuccinate synthase [Bacillus thuringiensis BMB171]
          Length = 401

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 2  EKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 38


>gi|120554647|ref|YP_958998.1| GMP synthase [Marinobacter aquaeolei VT8]
 gi|226739639|sp|A1U1E2|GUAA_MARAV RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|120324496|gb|ABM18811.1| GMP synthase (glutamine-hydrolyzing) [Marinobacter aquaeolei VT8]
          Length = 525

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 55/185 (29%), Gaps = 19/185 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMP 65
           +   LL  SGG DSS   +       D++  +  D G  R     +        +   + 
Sbjct: 227 SDKVLLGLSGGVDSSVTAALLHKAIGDQLTCVFVDNGLLRLHEGDQVMDMFASNMGVKVI 286

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +          L L+ L  ++     + +      +   +     +++ +L         
Sbjct: 287 RVDAED-----LFLSKLKGVNDPEQKRKIIGNTFIDVFDDEAANIKDVNWLAQGTIY--- 338

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                        + +     +   I++      L     + +  PL  L K E  K+  
Sbjct: 339 ---------PDVIESAASKTGKAHVIKSHHNVGGLPETMKMKLVEPLRELFKDEVRKIGL 389

Query: 186 DIGGQ 190
           ++G  
Sbjct: 390 ELGLP 394


>gi|194337468|ref|YP_002019262.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Pelodictyon phaeoclathratiforme BU-1]
 gi|194309945|gb|ACF44645.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Pelodictyon phaeoclathratiforme BU-1]
          Length = 361

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 15/37 (40%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
          +      ++  SGG DS+      +++   V  L+  
Sbjct: 1  MSVQKKVVVGISGGVDSAVSACLLVEQGYAVTGLNIR 37


>gi|47565044|ref|ZP_00236087.1| argininosuccinate synthase [Bacillus cereus G9241]
 gi|47557830|gb|EAL16155.1| argininosuccinate synthase [Bacillus cereus G9241]
          Length = 401

 Score = 43.8 bits (101), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          +    +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 2  EKKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 38


>gi|301053781|ref|YP_003791992.1| asparagine synthase [Bacillus anthracis CI]
 gi|300375950|gb|ADK04854.1| asparagine synthase [Bacillus cereus biovar anthracis str. CI]
          Length = 633

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 23/60 (38%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS   S A +    + T S  + QR   E++      +K+         S  E 
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKEF 322


>gi|256370679|ref|YP_003108504.1| putative bifunctional argininosuccinate synthase/acetyltransferase
           [Candidatus Sulcia muelleri SMDSEM]
 gi|256009471|gb|ACU52831.1| putative bifunctional argininosuccinate synthase
           (ArgG)/acetyltransferase activity of N-acetylglutamate
           synthase (ArgA) [Candidatus Sulcia muelleri SMDSEM]
          Length = 578

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 26/57 (45%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
              LL +SGG D+S CL +  ++  +V T+  + G     ELE       KI  +  
Sbjct: 187 EKILLAYSGGLDTSYCLKYLTNKGYKVITIIINTGGFKNKELELIEKRALKIGAIYH 243


>gi|215411307|ref|ZP_03420115.1| argininosuccinate synthase [Mycobacterium tuberculosis 94_M4241A]
 gi|298525157|ref|ZP_07012566.1| argininosuccinate synthase argG [Mycobacterium tuberculosis
          94_M4241A]
 gi|298494951|gb|EFI30245.1| argininosuccinate synthase argG [Mycobacterium tuberculosis
          94_M4241A]
          Length = 398

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           +   +L +SGG D S        +    V  ++ D GQ  +     R     
Sbjct: 1  MSERVILAYSGGLDTSVAISWIGKETGREVVAVAIDLGQGGEHMDVIRQRALD 53


>gi|209545327|ref|YP_002277556.1| GMP synthase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209533004|gb|ACI52941.1| GMP synthase, large subunit [Gluconacetobacter diazotrophicus PAl
           5]
          Length = 541

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 52/184 (28%), Gaps = 17/184 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DSS       +   D++  +  D G     E      V K           
Sbjct: 246 VICGLSGGVDSSVAAVLIHEAIGDQLTCIFVDPGILRAGE---AEEVVKTFRGRFNI--- 299

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                  L      D+  S+L      +I+   +   FV                  G  
Sbjct: 300 ------KLVHRDASDLFLSALEGVTDPEIKRKTIGRLFVEVFEEEAAKLGGADFLAQGTL 353

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                    +   +      TI++      L     + +  PL  L K E  +L +++G 
Sbjct: 354 Y----PDVIESVSFTGGPSVTIKSHHNVGGLPDRMKMQLVEPLRELFKDEVRELGRELGI 409

Query: 190 QDLV 193
            + +
Sbjct: 410 PEAI 413


>gi|167966586|ref|ZP_02548863.1| argininosuccinate synthase [Mycobacterium tuberculosis H37Ra]
          Length = 269

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           +   +L +SGG D S        +    V  ++ D GQ  +     R     
Sbjct: 1  MSERVILAYSGGLDTSVAISWIGKETGREVVAVAIDLGQGGEHMDVIRQRALD 53


>gi|194467107|ref|ZP_03073094.1| GMP synthase, large subunit [Lactobacillus reuteri 100-23]
 gi|194454143|gb|EDX43040.1| GMP synthase, large subunit [Lactobacillus reuteri 100-23]
          Length = 517

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 53/186 (28%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS           D++  +  D+G   K E        + +  L    
Sbjct: 223 KKVILGLSGGVDSSVTAVLIHKAIGDQLTCIFVDHGLLRKNE------ANQVMDALSRDL 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             ++ +       +      +   +   +  ++                 F         
Sbjct: 277 GVNIIKVDAADRFLGKLEGVTDPEQKRKIIGKEFIEV-------------FNEEAKKIKD 323

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +  G   TD          TI++      L  +    +  PL  L K ET +L + +
Sbjct: 324 ADFLAQGTLYTDVIESGTDTAQTIKSHHNVGGLPKKLGFKLIEPLRKLFKDETRELGEKL 383

Query: 188 GGQDLV 193
           G    +
Sbjct: 384 GIPHEL 389


>gi|83648563|ref|YP_436998.1| NAD synthase [Hahella chejuensis KCTC 2396]
 gi|83636606|gb|ABC32573.1| NAD synthase [Hahella chejuensis KCTC 2396]
          Length = 546

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 54/197 (27%), Gaps = 3/197 (1%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
            +  S ++  SGG DS+  L+ A+D    DRV  +   +   +++ LE      K +   
Sbjct: 285 NRFKSVVIGLSGGIDSAVTLAVAVDAIGADRVRAVMMPFRYTSQMSLEDAEAEAKALGVQ 344

Query: 64  MPKWKDSLGEDHIL-PLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     D  +  L  L        T+          +          + L      
Sbjct: 345 YEVVPIEPIYDQFMGALNPLFAGLDRDTTEENIQARIRGVILMGISNKTGALVLTTGNKS 404

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              +G   +   +           +    R       L       V T     +     K
Sbjct: 405 EMAVGYATLYGDMAGGYDVLKDVFKTMVFRLAWYRNTLSPVIPERVITRPPSAELAPDQK 464

Query: 183 LAQDIGGQDLVNLILEE 199
               +   ++++ IL  
Sbjct: 465 DEDSLPPYEILDEILSL 481


>gi|189345818|ref|YP_001942347.1| hypothetical protein Clim_0273 [Chlorobium limicola DSM 245]
 gi|189339965|gb|ACD89368.1| hypothetical protein Clim_0273 [Chlorobium limicola DSM 245]
          Length = 250

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 54/219 (24%), Gaps = 19/219 (8%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV---ELMPKWKD 69
           LL++GG DS+  L         V+        R  +  E       K+    +       
Sbjct: 9   LLWTGGWDSTYRLCELTRNGKTVQPFYILDSTRKSIRHELAAMDTIKVALKQKYTEGSAK 68

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            L   +I    I+ D   S+  KN++ K                  L        +    
Sbjct: 69  ILPTIYINQSDIIIDQETSTQYKNLSRKYHIGKQFEWLSAYVKANGLSGMEIAIEKNNFR 128

Query: 130 NI--VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                            +    +  + +  + L       ++       K      A+  
Sbjct: 129 QRDHFFYYLGKHLISTNNTITLSYESTDQDLLLFKGFSFPIY----NTTKIAMLAEAKKY 184

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYL 226
                   IL  +  C+   R+        C  C  C  
Sbjct: 185 ----NYETILALTWFCHNPIRN------KPCGMCNPCKD 213


>gi|94984705|ref|YP_604069.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Deinococcus geothermalis DSM 11300]
 gi|226738436|sp|Q1J0T4|GUAA_DEIGD RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|94554986|gb|ABF44900.1| GMP synthase [Deinococcus geothermalis DSM 11300]
          Length = 505

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 10  SALLLFSGGQDSSTC-LSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSST  L  A    DR+  +  D+G     E E      + +   +    
Sbjct: 212 RVLLAISGGVDSSTLGLLLARAIGDRLTAVFIDHGLLRLGEREQVEAALRPLGVNLVTVD 271

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            S           LG ++  S  +     I    +       R      F A        
Sbjct: 272 AS--------EEFLGALAGVSDPEQKRKIIGREFIRAFEREARKYGPFDFLA-------- 315

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                 +               I++      L  +    +  P   L K E  ++A+ +G
Sbjct: 316 ---QGTLYPDVIESAGGEGAANIKSHHNVGGLPEDLAFKLVEPFRTLFKDEVREIARLLG 372

Query: 189 GQDLVN 194
             D + 
Sbjct: 373 LPDAIR 378


>gi|15608796|ref|NP_216174.1| argininosuccinate synthase [Mycobacterium tuberculosis H37Rv]
 gi|15841114|ref|NP_336151.1| argininosuccinate synthase [Mycobacterium tuberculosis CDC1551]
 gi|31792845|ref|NP_855338.1| argininosuccinate synthase [Mycobacterium bovis AF2122/97]
 gi|121637566|ref|YP_977789.1| argininosuccinate synthase [Mycobacterium bovis BCG str. Pasteur
          1173P2]
 gi|148661454|ref|YP_001282977.1| argininosuccinate synthase [Mycobacterium tuberculosis H37Ra]
 gi|148822867|ref|YP_001287621.1| argininosuccinate synthase [Mycobacterium tuberculosis F11]
 gi|215404037|ref|ZP_03416218.1| argininosuccinate synthase [Mycobacterium tuberculosis 02_1987]
 gi|215426980|ref|ZP_03424899.1| argininosuccinate synthase [Mycobacterium tuberculosis T92]
 gi|215430552|ref|ZP_03428471.1| argininosuccinate synthase [Mycobacterium tuberculosis EAS054]
 gi|215445843|ref|ZP_03432595.1| argininosuccinate synthase [Mycobacterium tuberculosis T85]
 gi|218753365|ref|ZP_03532161.1| argininosuccinate synthase [Mycobacterium tuberculosis GM 1503]
 gi|224990041|ref|YP_002644728.1| argininosuccinate synthase [Mycobacterium bovis BCG str. Tokyo
          172]
 gi|253799302|ref|YP_003032303.1| argininosuccinate synthase argG [Mycobacterium tuberculosis KZN
          1435]
 gi|254231857|ref|ZP_04925184.1| argininosuccinate synthase argG [Mycobacterium tuberculosis C]
 gi|254550666|ref|ZP_05141113.1| argininosuccinate synthase [Mycobacterium tuberculosis '98-R604
          INH-RIF-EM']
 gi|260186608|ref|ZP_05764082.1| argininosuccinate synthase [Mycobacterium tuberculosis CPHL_A]
 gi|260200722|ref|ZP_05768213.1| argininosuccinate synthase [Mycobacterium tuberculosis T46]
 gi|260204928|ref|ZP_05772419.1| argininosuccinate synthase [Mycobacterium tuberculosis K85]
 gi|289443113|ref|ZP_06432857.1| argininosuccinate synthase [Mycobacterium tuberculosis T46]
 gi|289447270|ref|ZP_06437014.1| argininosuccinate synthase argG [Mycobacterium tuberculosis
          CPHL_A]
 gi|289554567|ref|ZP_06443777.1| argininosuccinate synthase argG [Mycobacterium tuberculosis KZN
          605]
 gi|289574327|ref|ZP_06454554.1| argininosuccinate synthase argG [Mycobacterium tuberculosis K85]
 gi|289745904|ref|ZP_06505282.1| argininosuccinate synthase argG [Mycobacterium tuberculosis
          02_1987]
 gi|289750208|ref|ZP_06509586.1| argininosuccinate synthase argG [Mycobacterium tuberculosis T92]
 gi|289753747|ref|ZP_06513125.1| argininosuccinate synthase [Mycobacterium tuberculosis EAS054]
 gi|289757764|ref|ZP_06517142.1| argininosuccinate synthase [Mycobacterium tuberculosis T85]
 gi|289761808|ref|ZP_06521186.1| argininosuccinate synthase argG [Mycobacterium tuberculosis GM
          1503]
 gi|294996608|ref|ZP_06802299.1| argininosuccinate synthase [Mycobacterium tuberculosis 210]
 gi|297634211|ref|ZP_06951991.1| argininosuccinate synthase [Mycobacterium tuberculosis KZN 4207]
 gi|297731198|ref|ZP_06960316.1| argininosuccinate synthase [Mycobacterium tuberculosis KZN R506]
 gi|306775845|ref|ZP_07414182.1| argininosuccinate synthase argG [Mycobacterium tuberculosis
          SUMu001]
 gi|306784391|ref|ZP_07422713.1| argininosuccinate synthase argG [Mycobacterium tuberculosis
          SUMu003]
 gi|306788759|ref|ZP_07427081.1| argininosuccinate synthase argG [Mycobacterium tuberculosis
          SUMu004]
 gi|306793093|ref|ZP_07431395.1| argininosuccinate synthase argG [Mycobacterium tuberculosis
          SUMu005]
 gi|306797475|ref|ZP_07435777.1| argininosuccinate synthase argG [Mycobacterium tuberculosis
          SUMu006]
 gi|306803356|ref|ZP_07440024.1| argininosuccinate synthase argG [Mycobacterium tuberculosis
          SUMu008]
 gi|306807937|ref|ZP_07444605.1| argininosuccinate synthase argG [Mycobacterium tuberculosis
          SUMu007]
 gi|306967754|ref|ZP_07480415.1| argininosuccinate synthase argG [Mycobacterium tuberculosis
          SUMu009]
 gi|306971952|ref|ZP_07484613.1| argininosuccinate synthase argG [Mycobacterium tuberculosis
          SUMu010]
 gi|307079667|ref|ZP_07488837.1| argininosuccinate synthase argG [Mycobacterium tuberculosis
          SUMu011]
 gi|307084239|ref|ZP_07493352.1| argininosuccinate synthase argG [Mycobacterium tuberculosis
          SUMu012]
 gi|313658530|ref|ZP_07815410.1| argininosuccinate synthase [Mycobacterium tuberculosis KZN V2475]
 gi|54036772|sp|P63643|ASSY_MYCBO RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|54040841|sp|P63642|ASSY_MYCTU RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|166220991|sp|A1KJ75|ASSY_MYCBP RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|166220995|sp|A5U315|ASSY_MYCTA RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|254807528|sp|C1ANT1|ASSY_MYCBT RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|1839010|emb|CAB06629.1| Probable Argininosuccinate synthase argG [Mycobacterium
          tuberculosis H37Rv]
 gi|13881330|gb|AAK45965.1| argininosuccinate synthase [Mycobacterium tuberculosis CDC1551]
 gi|31618435|emb|CAD96353.1| Probable Argininosuccinate synthase argG [Mycobacterium bovis
          AF2122/97]
 gi|121493213|emb|CAL71684.1| Probable Argininosuccinate synthase argG [Mycobacterium bovis BCG
          str. Pasteur 1173P2]
 gi|124600916|gb|EAY59926.1| argininosuccinate synthase argG [Mycobacterium tuberculosis C]
 gi|148505606|gb|ABQ73415.1| argininosuccinate synthase [Mycobacterium tuberculosis H37Ra]
 gi|148721394|gb|ABR06019.1| argininosuccinate synthase argG [Mycobacterium tuberculosis F11]
 gi|224773154|dbj|BAH25960.1| argininosuccinate synthase [Mycobacterium bovis BCG str. Tokyo
          172]
 gi|253320805|gb|ACT25408.1| argininosuccinate synthase argG [Mycobacterium tuberculosis KZN
          1435]
 gi|289416032|gb|EFD13272.1| argininosuccinate synthase [Mycobacterium tuberculosis T46]
 gi|289420228|gb|EFD17429.1| argininosuccinate synthase argG [Mycobacterium tuberculosis
          CPHL_A]
 gi|289439199|gb|EFD21692.1| argininosuccinate synthase argG [Mycobacterium tuberculosis KZN
          605]
 gi|289538758|gb|EFD43336.1| argininosuccinate synthase argG [Mycobacterium tuberculosis K85]
 gi|289686432|gb|EFD53920.1| argininosuccinate synthase argG [Mycobacterium tuberculosis
          02_1987]
 gi|289690795|gb|EFD58224.1| argininosuccinate synthase argG [Mycobacterium tuberculosis T92]
 gi|289694334|gb|EFD61763.1| argininosuccinate synthase [Mycobacterium tuberculosis EAS054]
 gi|289709314|gb|EFD73330.1| argininosuccinate synthase argG [Mycobacterium tuberculosis GM
          1503]
 gi|289713328|gb|EFD77340.1| argininosuccinate synthase [Mycobacterium tuberculosis T85]
 gi|308215598|gb|EFO74997.1| argininosuccinate synthase argG [Mycobacterium tuberculosis
          SUMu001]
 gi|308330859|gb|EFP19710.1| argininosuccinate synthase argG [Mycobacterium tuberculosis
          SUMu003]
 gi|308334678|gb|EFP23529.1| argininosuccinate synthase argG [Mycobacterium tuberculosis
          SUMu004]
 gi|308338471|gb|EFP27322.1| argininosuccinate synthase argG [Mycobacterium tuberculosis
          SUMu005]
 gi|308342175|gb|EFP31026.1| argininosuccinate synthase argG [Mycobacterium tuberculosis
          SUMu006]
 gi|308345667|gb|EFP34518.1| argininosuccinate synthase argG [Mycobacterium tuberculosis
          SUMu007]
 gi|308349968|gb|EFP38819.1| argininosuccinate synthase argG [Mycobacterium tuberculosis
          SUMu008]
 gi|308354604|gb|EFP43455.1| argininosuccinate synthase argG [Mycobacterium tuberculosis
          SUMu009]
 gi|308358476|gb|EFP47327.1| argininosuccinate synthase argG [Mycobacterium tuberculosis
          SUMu010]
 gi|308362413|gb|EFP51264.1| argininosuccinate synthase argG [Mycobacterium tuberculosis
          SUMu011]
 gi|308366144|gb|EFP54995.1| argininosuccinate synthase argG [Mycobacterium tuberculosis
          SUMu012]
 gi|323719749|gb|EGB28863.1| argininosuccinate synthase argG [Mycobacterium tuberculosis
          CDC1551A]
 gi|326903272|gb|EGE50205.1| argininosuccinate synthase argG [Mycobacterium tuberculosis
          W-148]
 gi|328459053|gb|AEB04476.1| argininosuccinate synthase argG [Mycobacterium tuberculosis KZN
          4207]
          Length = 398

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           +   +L +SGG D S        +    V  ++ D GQ  +     R     
Sbjct: 1  MSERVILAYSGGLDTSVAISWIGKETGREVVAVAIDLGQGGEHMDVIRQRALD 53


>gi|330444576|ref|YP_004377562.1| GMP synthase [Chlamydophila pecorum E58]
 gi|328807686|gb|AEB41859.1| GMP synthase [Chlamydophila pecorum E58]
          Length = 513

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           + +++    LL  SGG DS+   +       +RV  +  D G   + E+E        + 
Sbjct: 213 EKVEENERVLLGLSGGVDSTITAALLHKALGERVICVLVDTGFLRENEVEEIASQCAFLK 272

Query: 62  ELM 64
           E +
Sbjct: 273 ENL 275


>gi|320531338|ref|ZP_08032310.1| asparagine synthase [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320136429|gb|EFW28405.1| asparagine synthase [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 506

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 19/50 (38%), Gaps = 1/50 (2%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           L+  SGG DS     W      R   ++F YG     E+     V + + 
Sbjct: 149 LVPLSGGLDSRLLAVWLKRHGARNV-VTFTYGVPGSTEVAISRGVAEALG 197


>gi|268607984|ref|ZP_06141715.1| GMP synthase [Ruminococcus flavefaciens FD-1]
          Length = 516

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 46/186 (24%), Gaps = 13/186 (6%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS            ++  +  D G   K E +       K+ ++    
Sbjct: 215 KKVILGLSGGVDSSVAAGLLSRAVGKQLTCVFVDQGLMRKDEGDFVEETFTKLFDMNFVR 274

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +   +     L  L  ++     + +      N   N         F         R+ 
Sbjct: 275 VNCKDQF----LTALNGVTDPEQKRKIIGTEFYNVFWNKIREQGTDGFFAQGTIYPDRIE 330

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                     +            +                   PL  L K E  ++ + +
Sbjct: 331 SGKGNQSGHGSTAVIKTHHNMVKMPDDIKFAGT--------IEPLGDLFKDEVRRVGEKL 382

Query: 188 GGQDLV 193
           G    +
Sbjct: 383 GIPHDL 388


>gi|300781259|ref|ZP_07091113.1| argininosuccinate synthase [Corynebacterium genitalium ATCC
          33030]
 gi|300532966|gb|EFK54027.1| argininosuccinate synthase [Corynebacterium genitalium ATCC
          33030]
          Length = 406

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 19/53 (35%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
               +L +SGG D+S  +   A      V  +S D GQ  +     R     
Sbjct: 1  MTNRVVLAYSGGLDTSVAIPYLAEMTGGEVVAVSLDLGQGGEDMESVRQRALD 53


>gi|160941480|ref|ZP_02088814.1| hypothetical protein CLOBOL_06370 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435564|gb|EDP13331.1| hypothetical protein CLOBOL_06370 [Clostridium bolteae ATCC
           BAA-613]
          Length = 288

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 62/191 (32%), Gaps = 39/191 (20%)

Query: 3   DIIKKAPSALLL-FSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
            + + A   + L FSGG DSS    T    A     +V  ++FD       +LE    V 
Sbjct: 25  RMEQLAKEDICLAFSGGVDSSLLLKTAADAAAHTGRKVYAVTFDSRLHPSCDLEIARRVA 84

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
            ++           G   ++ +  L               I++N +   ++  R+     
Sbjct: 85  GELG----------GIHEVITVDEL-----------EQESIKNNPVNRCYLCKRH--LFS 121

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
             A LA   GI  I+ G  E D   Y              I    E  +      + + K
Sbjct: 122 RLAELAEARGIRYILDGTNEDDMHVYRP-----------GIRALKELGIISPLAELHITK 170

Query: 178 YETWKLAQDIG 188
            +   LA + G
Sbjct: 171 AQVKALASEYG 181


>gi|149926560|ref|ZP_01914821.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Limnobacter sp. MED105]
 gi|149824923|gb|EDM84137.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Limnobacter sp. MED105]
          Length = 540

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 55/183 (30%), Gaps = 26/183 (14%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVE-LECRLCVRKKIVELMPKWK 68
           ++L  SGG DSS   +       D++  +  D+G     E  +      K +   +    
Sbjct: 226 VILGLSGGVDSSVAAALIHKAIGDQLTCVFVDHGLLRFKEGEQVMETFAKHLGVRVVHVN 285

Query: 69  ---DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              + +G+   +               +V  +         ++    I   V  +  A  
Sbjct: 286 ATEEFMGQLKGVTDPEAKRKIIGKAFVDVFQREAGMRANAKWLAQGTIYPDVIESAGAKT 345

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
              T+I                    ++      L    ++ +  PL  L K E  KL  
Sbjct: 346 GKATSI--------------------KSHHNVGGLPDTLNLKLLEPLRDLFKDEVRKLGV 385

Query: 186 DIG 188
           ++G
Sbjct: 386 ELG 388


>gi|254303976|ref|ZP_04971334.1| GMP synthase (glutamine-hydrolyzing) [Fusobacterium nucleatum
           subsp. polymorphum ATCC 10953]
 gi|148324168|gb|EDK89418.1| GMP synthase (glutamine-hydrolyzing) [Fusobacterium nucleatum
           subsp. polymorphum ATCC 10953]
          Length = 512

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 55/187 (29%), Gaps = 18/187 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +        ++  +  D G    +  +    V +   +    
Sbjct: 215 NKQVILGLSGGVDSSVAAALINKAIGKQLTCIFVDTG---LLRKDEAKQVMEVYAKNFDM 271

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +  +    + + G     +  K +  +  +                      A  L
Sbjct: 272 NIKCVNAEERFLIKLAGVTDPETKRKIIGKEFVEVFNEE-----------AKKIEGAEFL 320

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+     P      I++      L  +    +  PL  L K E  K+ ++
Sbjct: 321 AQGTIYPDVIESVSVKGPSVT---IKSHHNVGGLPEDLKFELLEPLRELFKDEVRKVGRE 377

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 378 LGIPDYM 384


>gi|159037510|ref|YP_001536763.1| argininosuccinate synthase [Salinispora arenicola CNS-205]
 gi|189046401|sp|A8LYQ9|ASSY_SALAI RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|157916345|gb|ABV97772.1| Argininosuccinate synthase [Salinispora arenicola CNS-205]
          Length = 403

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 19/53 (35%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
               +L +SGG D+S  +   A      V  ++ D GQ  +     R     
Sbjct: 1  MTERVVLAYSGGLDTSVAIPYLAEQTGAEVIAVAVDVGQGGEDLDAIRQRALD 53


>gi|85859860|ref|YP_462062.1| GMP synthase [Syntrophus aciditrophicus SB]
 gi|85722951|gb|ABC77894.1| GMP synthase (glutamine-hydrolyzing) [Syntrophus aciditrophicus SB]
          Length = 296

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 28/78 (35%), Gaps = 1/78 (1%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +K   S  + FSGG DS+  L  A +   D V  L+       K E+     + + I   
Sbjct: 39  LKSYGSCAVAFSGGVDSTFLLWAAREALGDSVTALTASAPYMPKEEICEAGRIAETIGVR 98

Query: 64  MPKWKDSLGEDHILPLAI 81
               +  L E+       
Sbjct: 99  HAVLEIPLNEEIRFNPDD 116


>gi|329666624|gb|AEB92572.1| GMP synthase [Lactobacillus johnsonii DPC 6026]
          Length = 517

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 57/186 (30%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS   +       D++  +  D+G   K E +    V + + + +   
Sbjct: 223 KKVILGLSGGVDSSVTATLLHKAIGDQLTAIFVDHGMLRKDEGD---QVMQALNKDLGVN 279

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       L  L  ++     + +  K             +++ FL         + 
Sbjct: 280 IIRVNAQERF-LNKLKGVTDPEQKRKIIGKEFIEVFNEEAKKLKDVDFLAQGTLYTDVIE 338

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                                 TI++      L  + H  +  PL  L K E  +L + +
Sbjct: 339 ---------------SGTNTAQTIKSHHNVGGLPEDMHFELIEPLRKLFKDEVRELGEKL 383

Query: 188 GGQDLV 193
           G    +
Sbjct: 384 GIPHDL 389


>gi|303244362|ref|ZP_07330698.1| Queuosine synthesis-like protein [Methanothermococcus okinawensis
           IH1]
 gi|302485257|gb|EFL48185.1| Queuosine synthesis-like protein [Methanothermococcus okinawensis
           IH1]
          Length = 256

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 57/200 (28%), Gaps = 20/200 (10%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           ND +KK P AL+ FSGG DS      A   F  +  ++          +  R   +K I 
Sbjct: 53  NDKLKK-PKALVAFSGGVDSVASSIIAKKIF-DITAIT------AYSPIIMRPDNKKNIS 104

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHS---------SLTKNVAMKIQDNNLPNTFVPGRN 112
           EL  K      +   + + +      +            K +   +      N       
Sbjct: 105 ELAKKLN---IKHEFVDIDLNEVQKDTLNGKYHPCGRCHKIIEKAVLSYAKENDIKYIIY 161

Query: 113 IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
              L        +     I I +         D R    +   T         +      
Sbjct: 162 GDMLSVGYLSIIQEENDIIRINMPSYLVITKNDSRKILKKNNITISQKYGCPLLRAAHKY 221

Query: 173 MWLKKYETWKLAQDIGGQDL 192
              KK+   ++ +++  Q +
Sbjct: 222 NHNKKFTIQRILREVRAQVI 241


>gi|256832349|ref|YP_003161076.1| argininosuccinate synthase [Jonesia denitrificans DSM 20603]
 gi|256685880|gb|ACV08773.1| argininosuccinate synthase [Jonesia denitrificans DSM 20603]
          Length = 413

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 17/53 (32%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
               +L +SGG D S      A      V  ++ D GQ  +     R     
Sbjct: 1  MTERIVLAYSGGLDTSVAIGWIAEATGAEVIAVAVDVGQGGEDLEVIRQRALD 53


>gi|42518314|ref|NP_964244.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Lactobacillus johnsonii NCC 533]
 gi|50400372|sp|Q74LF7|GUAA_LACJO RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|41582598|gb|AAS08210.1| GMP synthase [Lactobacillus johnsonii NCC 533]
          Length = 517

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 57/186 (30%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS   +       D++  +  D+G   K E +    V + + + +   
Sbjct: 223 KKVILGLSGGVDSSVTATLLHKAIGDQLTAIFVDHGMLRKDEGD---QVMQALNKDLGVN 279

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       L  L  ++     + +  K             +++ FL         + 
Sbjct: 280 IIRVNAQERF-LNKLKGVTDPEQKRKIIGKEFIEVFNEEAKKLKDVDFLAQGTLYTDVIE 338

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                                 TI++      L  + H  +  PL  L K E  +L + +
Sbjct: 339 ---------------SGTNTAQTIKSHHNVGGLPEDMHFELIEPLRKLFKDEVRELGEKL 383

Query: 188 GGQDLV 193
           G    +
Sbjct: 384 GIPHDL 389


>gi|320095663|ref|ZP_08027319.1| GMP synthase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319977384|gb|EFW09071.1| GMP synthase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 526

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 50/185 (27%), Gaps = 13/185 (7%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKWK 68
            +   SGG DSS   +       D++     D+G  R     +      + +   +    
Sbjct: 224 VICALSGGVDSSVAAALVHKAVGDQLTCFFIDHGLLRAGEREQVEGDYARGMGIRVITCD 283

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +S        L  L  ++     + +  +    +           +            G 
Sbjct: 284 ESQR-----FLDALAGVTEPETKRKIIGREFIRSFEAAQKQVVEQVGASGGEVKFLVQGT 338

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
               +                 I++      L  +    +  PL  L K E   + +++G
Sbjct: 339 LYPDVVESGGG------EGAANIKSHHNVGGLPEDMAFELVEPLRTLFKDEVRAVGRELG 392

Query: 189 GQDLV 193
             D +
Sbjct: 393 LPDYL 397


>gi|313679249|ref|YP_004056988.1| nh(3)-dependent nad(+) synthetase [Oceanithermus profundus DSM
          14977]
 gi|313151964|gb|ADR35815.1| NH(3)-dependent NAD(+) synthetase [Oceanithermus profundus DSM
          14977]
          Length = 283

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 22/61 (36%), Gaps = 2/61 (3%)

Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           A++  SGG DSS  L+ A      + V  LS  +   +   +       ++    +   
Sbjct: 39 KAVVAASGGVDSSVTLALAARALGPENVHALSLPHRDSSPESVAHARLAAERFGVALETV 98

Query: 68 K 68
           
Sbjct: 99 D 99


>gi|312214114|emb|CBX94116.1| similar to GMP synthase [Leptosphaeria maculans]
          Length = 541

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 57/183 (31%), Gaps = 13/183 (7%)

Query: 15  FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
            SGG DS+       +   DR   +  D G     E    + V+K + E           
Sbjct: 240 VSGGVDSTVAAKLMKEAIGDRFHAVMVDNGVLRLNE---AVQVKKTLDE------GLGIN 290

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN--- 130
             ++  + L     + +T N   K +        V       +  AA  + + G      
Sbjct: 291 LTVIDASDLFLDRLAGITDNPEQKRKVIGNTFIEVFQEQAKKIAAAAASSSKAGEIEWLL 350

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
                 +   S        TI+       L    ++ +  PL  L K E  +L  ++G  
Sbjct: 351 QGTLYPDVIESLSFKGPSQTIKTHHNVGGLPANMNLKLIEPLRELFKDEVRELGVELGIP 410

Query: 191 DLV 193
           + +
Sbjct: 411 EDL 413


>gi|311894905|dbj|BAJ27313.1| putative argininosuccinate synthase [Kitasatospora setae KM-6054]
          Length = 401

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)

Query: 8  APSALLLFSGGQDSSTC-LSWALDRFDRVETLSFDYGQ 44
              +L +SGG D+S C    A +    V  ++ D GQ
Sbjct: 6  TDRVVLAYSGGLDTSVCIGWIAEETGAEVIAVAVDVGQ 43


>gi|226952213|ref|ZP_03822677.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Acinetobacter sp. ATCC 27244]
 gi|294648847|ref|ZP_06726303.1| GMP synthase [Acinetobacter haemolyticus ATCC 19194]
 gi|226837051|gb|EEH69434.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Acinetobacter sp. ATCC 27244]
 gi|292825238|gb|EFF83985.1| GMP synthase [Acinetobacter haemolyticus ATCC 19194]
          Length = 522

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 57/189 (30%), Gaps = 17/189 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS   +       D++  +  D G     E +          ++M  
Sbjct: 224 NEKVLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRLNEGD----------QVMQM 273

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           + D++G    +  A   +   ++L   V  + +   +   F+                  
Sbjct: 274 FADNMG--IRVIRADAEERFLTALAGEVDPEKKRKIIGREFIEVFAEEARKLDGVKFLAQ 331

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G           + +     +   I++      L  +    +  PL  L K E  KL   
Sbjct: 332 GTIY----PDVIESAASKQGKAHVIKSHHNVGGLPEDLAFDLVEPLRDLFKDEVRKLGTT 387

Query: 187 IGGQDLVNL 195
           +G    +  
Sbjct: 388 LGLPHSMIY 396


>gi|190565648|ref|ZP_03018568.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
           Tsiankovskii-I]
 gi|190563675|gb|EDV17640.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus anthracis
           Tsiankovskii-I]
          Length = 633

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 23/60 (38%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS   S A +    + T S  + QR   E++      +K+         S  E 
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSVGFEQRGFSEVDVAKETAEKLGVKNHNVFISAKEF 322


>gi|146302985|ref|YP_001190301.1| GMP synthase [Metallosphaera sedula DSM 5348]
 gi|145701235|gb|ABP94377.1| GMP synthase (glutamine-hydrolyzing) [Metallosphaera sedula DSM
           5348]
          Length = 369

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 49/183 (26%), Gaps = 22/183 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DS+T  +       D+V  +  D G   + E         ++ +L+   
Sbjct: 22  NRVVAAVSGGVDSTTAAALMYRILGDKVTPVMIDTGFLRENE-------ANRVKDLLK-- 72

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             S+    I+           S  + +    +                +    +     G
Sbjct: 73  --SVMPLKIVD----RSERFISSIEGLEDAEEKRKKFRDVFYSTISEIVAQENSRFLVQG 126

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    +       +         E           ++  PL  L K E  +LA+ +
Sbjct: 127 TIAPDWIETQGGIKTQHNVLVQLGINTEKTW------GFSLVEPLADLYKNEVRELARYL 180

Query: 188 GGQ 190
           G  
Sbjct: 181 GLP 183


>gi|84998386|ref|XP_953914.1| GMP synthase [Theileria annulata]
 gi|65304912|emb|CAI73237.1| GMP synthase, putative [Theileria annulata]
          Length = 520

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 48/181 (26%), Gaps = 16/181 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPK 66
              +   SGG DS+           DR   +  D G  R+    EC   VRK++      
Sbjct: 221 KYVVAALSGGVDSTVSAKMVQSVIGDRFHGVMVDTGLMRHNEIAECEKRVRKEVPG---- 276

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     + L +    +         +  +        V        +       + 
Sbjct: 277 ----------IKLTVRYSQNVFFKELAGVVDPEMKRKIIGRVYIEEFEKAIKELGFNEKN 326

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +        +   S         +++      L       +  P+ +L K E  +L + 
Sbjct: 327 CLLLQGTIYPDIIESELNRRSKLPVKSHHNVGGLPERMKFELIEPVRYLFKEEVRELGRL 386

Query: 187 I 187
           +
Sbjct: 387 L 387


>gi|325103567|ref|YP_004273221.1| asparagine synthase (glutamine-hydrolyzing) [Pedobacter saltans DSM
           12145]
 gi|324972415|gb|ADY51399.1| asparagine synthase (glutamine-hydrolyzing) [Pedobacter saltans DSM
           12145]
          Length = 606

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 26/55 (47%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  SGG DSS   + A  + D+V+T S  + +++  E +  + V + +       
Sbjct: 256 VFLSGGIDSSLVAAIAASKKDKVKTFSIKFQEKDFDESQYAIQVAEHLRTEHHTI 310


>gi|260433934|ref|ZP_05787905.1| GMP synthase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417762|gb|EEX11021.1| GMP synthase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 519

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 56/183 (30%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS       +   D++  +  D+G   K E        +++V +    
Sbjct: 222 KKVICGLSGGVDSSVAAILIHEAIGDQLTCVFVDHGLLRKNE-------AQEVVSMFRDN 274

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +            LG++   S  +     I    +                   A  L 
Sbjct: 275 YNIQLIHADESELFLGELEGVSDPETKRKIIGKLFIDVFQKH-------ADTIEGAEFLA 327

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   V E+    +      TI++      L  +  + +  PL  L K E   L +++
Sbjct: 328 QGTLYPDVIESV--SFSGGPSVTIKSHHNVGGLPEKMGLKLVEPLRELFKDEVRALGREL 385

Query: 188 GGQ 190
           G  
Sbjct: 386 GLP 388


>gi|251771982|gb|EES52554.1| thiamine biosynthesis protein [Leptospirillum ferrodiazotrophum]
          Length = 344

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 8/30 (26%), Positives = 11/30 (36%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLS 39
            +LL SGG DS+            +  L 
Sbjct: 3  KGVLLLSGGLDSTLSGLLLRRMGVELVALH 32


>gi|242399383|ref|YP_002994807.1| Asparagine synthetase [Thermococcus sibiricus MM 739]
 gi|242265776|gb|ACS90458.1| Asparagine synthetase [Thermococcus sibiricus MM 739]
          Length = 509

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 29/74 (39%), Gaps = 2/74 (2%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           +  ++ +    +LFSGG DSS     A      V   +   G     +LE    V +++ 
Sbjct: 262 STKLRSSKRVRVLFSGGLDSSLIALLAKKYSKEVILYTA--GAEGSPDLEWARKVSEQLD 319

Query: 62  ELMPKWKDSLGEDH 75
             + ++   L E  
Sbjct: 320 LTLKEYVFDLEEVK 333


>gi|225571157|ref|ZP_03780155.1| hypothetical protein CLOHYLEM_07245 [Clostridium hylemonae DSM
           15053]
 gi|225159988|gb|EEG72607.1| hypothetical protein CLOHYLEM_07245 [Clostridium hylemonae DSM
           15053]
          Length = 477

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 36/127 (28%), Gaps = 8/127 (6%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDR----FDRVETLSFDYGQRNKVELECRLCVRKK 59
           +++++   +   SGG DS   L   L+        V  +   +G R     E      + 
Sbjct: 35  MLQQSDRVIAGVSGGADSICLLFVLLELKKEIGFSVTAVHVHHGLRA----ETADRDAQY 90

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           + ++  + K  L   H        +   +       ++            G  I      
Sbjct: 91  VEKICREQKVELLVYHEDVKTYAAEHKLTVEEAGREVRRAAFKEVLRKKQGTKIALAHHQ 150

Query: 120 ATLAYRL 126
              A  L
Sbjct: 151 NDNAETL 157


>gi|225026163|ref|ZP_03715355.1| hypothetical protein EUBHAL_00404 [Eubacterium hallii DSM 3353]
 gi|224956414|gb|EEG37623.1| hypothetical protein EUBHAL_00404 [Eubacterium hallii DSM 3353]
          Length = 515

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 45/185 (24%), Gaps = 16/185 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS            ++  +  D+G   K E +    V            
Sbjct: 218 RVLLALSGGVDSSVAAGLLSRAIGKQLTCVFVDHGLLRKDEGDEVESV------------ 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G +    L  +   +       +A    +       +    I      A     +  
Sbjct: 266 --FGPEGQFDLNFIRVNAQQRYYDKLAGVT-EPEAKRKIIGEEFIRIFEEEAKKIGAVDF 322

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   SG                         +  PL  L K E  K   ++G
Sbjct: 323 LAQGTIYPDVVESGLGGESAVIKSHHNVGGLPDYVDFKEIIEPLRDLFKDEVRKAGLELG 382

Query: 189 GQDLV 193
             + +
Sbjct: 383 IPEKL 387


>gi|212710380|ref|ZP_03318508.1| hypothetical protein PROVALCAL_01440 [Providencia alcalifaciens DSM
           30120]
 gi|212686962|gb|EEB46490.1| hypothetical protein PROVALCAL_01440 [Providencia alcalifaciens DSM
           30120]
          Length = 458

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 38/132 (28%), Gaps = 11/132 (8%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFD------RVETLSFDYGQRNKVELECRLC 55
            + I      L+ FSGG DS+  L               +  +   +G   + +     C
Sbjct: 13  REKIGSYRKILVGFSGGIDSTVLLHALYQIKISELPSLEIRAIHVHHGLNIQADKWEAHC 72

Query: 56  VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
                  L  KW       H+        I  ++  +      ++       V  +++  
Sbjct: 73  A-----SLCQKWDIPFICRHVTVEGSNKGIEAAARAERYQAYREELLEDEIIVTAQHLDD 127

Query: 116 LVFAATLAYRLG 127
                 LA + G
Sbjct: 128 QAETVMLALKRG 139


>gi|206977928|ref|ZP_03238815.1| tRNA(Ile)-lysidine synthetase [Bacillus cereus H3081.97]
 gi|222093833|ref|YP_002527882.1| cell cycle protein [Bacillus cereus Q1]
 gi|206743834|gb|EDZ55254.1| tRNA(Ile)-lysidine synthetase [Bacillus cereus H3081.97]
 gi|221237880|gb|ACM10590.1| cell cycle protein [Bacillus cereus Q1]
          Length = 476

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 23/195 (11%), Positives = 53/195 (27%), Gaps = 21/195 (10%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D++K+  + ++  SGG DS   L + L++             R   + E  +     +  
Sbjct: 17  DVLKERSTIVVGVSGGPDSLALLYYLLEK-------------RAAKQFEIVVAHVDHMFR 63

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                 D   ED      +   +     T  + +                     F   +
Sbjct: 64  -----GDESHEDLQFVQDLCKGLEVICETIRINVSQYQQQYGMNAQVAARECRYAFLERI 118

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKKYE 179
             +     + +G    D       R       +    + ++       +  PL+ + K E
Sbjct: 119 MKKYDARYVALGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGYLIRPLLGVTKEE 178

Query: 180 TWKLAQDIGGQDLVN 194
                  +     ++
Sbjct: 179 IVDYCNKLKIIPRID 193


>gi|167912477|ref|ZP_02499568.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei 112]
          Length = 356

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 40/182 (21%), Gaps = 10/182 (5%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS       ++   V  L     + +     C         + +     +    
Sbjct: 1   MSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQ-----DWIDVVSVADLIG 55

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
             +            +      +      PN  V     I        A  LG   I  G
Sbjct: 56  IDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLGAQTIATG 115

Query: 135 VCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                               T         L          PL  + K    ++A  IG 
Sbjct: 116 HYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTRVREIAAQIGL 175

Query: 190 QD 191
            +
Sbjct: 176 PN 177


>gi|167721162|ref|ZP_02404398.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei DM98]
          Length = 296

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 40/182 (21%), Gaps = 10/182 (5%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS       ++   V  L     + +     C         + +     +    
Sbjct: 1   MSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQ-----DWIDVVSVADLIG 55

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
             +            +      +      PN  V     I        A  LG   I  G
Sbjct: 56  IDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLGAQTIATG 115

Query: 135 VCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                               T         L          PL  + K    ++A  IG 
Sbjct: 116 HYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTRVREIAAQIGL 175

Query: 190 QD 191
            +
Sbjct: 176 PN 177


>gi|85712713|ref|ZP_01043758.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Idiomarina baltica OS145]
 gi|85693445|gb|EAQ31398.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Idiomarina baltica OS145]
          Length = 525

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 50/184 (27%), Gaps = 17/184 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +L  SGG DSS            ++  +  D G    + L     V +   +    
Sbjct: 227 SDKVILGLSGGVDSSVTAMLLHRAIGSQLTCVFVDNG---LLRLNEAEQVMEMFGDHFGL 283

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +  +    L  L   +     + +                  + +L          
Sbjct: 284 NIIPVAAEQRF-LDALKGEADPEKKRKIIGNTFIEIFDEQASQLTEVDWLAQGTIY---- 338

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                       + +G    +   I++      L  +  + +  PL  L K E  K+  +
Sbjct: 339 --------PDVIESAGSKTGKAHVIKSHHNVGGLPEDMKLGLVEPLRELFKDEVRKIGLE 390

Query: 187 IGGQ 190
           +G  
Sbjct: 391 LGLP 394


>gi|332305591|ref|YP_004433442.1| GMP synthase, large subunit [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332172920|gb|AEE22174.1| GMP synthase, large subunit [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 525

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 49/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS             +  +  D G     E +              +  D
Sbjct: 230 VILGLSGGVDSSVVAMLLHRAIGKNLTCVFVDNGLLRLNEGQ--------------QVMD 275

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+   L +  +              + +        V              A  L   
Sbjct: 276 MFGDHFGLNIIKIDAEERFLSALAGTDEPEAKRKIIGRVFVEVFDEESKKLKNAKWLAQG 335

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S         I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 336 TIYPDVIESAGSATGKAHV--IKSHHNVGGLPADMQMGLVEPLRELFKDEVRKIGLELGL 393

Query: 190 Q 190
            
Sbjct: 394 P 394


>gi|312195586|ref|YP_004015647.1| argininosuccinate synthase [Frankia sp. EuI1c]
 gi|311226922|gb|ADP79777.1| argininosuccinate synthase [Frankia sp. EuI1c]
          Length = 419

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 32/123 (26%), Gaps = 11/123 (8%)

Query: 16  SGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDH 75
           SGG DS T   W      +V   + D GQ    E E    V +++               
Sbjct: 16  SGGLDSCTVTHWMAAHDVKVICFTADLGQ--PDETEGLDVVAERMKACGAVEA------- 66

Query: 76  ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGV 135
              +  L      +  + +    +         P    + +          GI  +  G 
Sbjct: 67  --VVVPLRTEMGEAGVQAIQGLTRYEGRYWNTTPLGRYVTIRGVLPHMLERGIKILSHGA 124

Query: 136 CET 138
              
Sbjct: 125 TGR 127


>gi|119717853|ref|YP_924818.1| GMP synthase [Nocardioides sp. JS614]
 gi|119538514|gb|ABL83131.1| GMP synthase (glutamine-hydrolyzing) [Nocardioides sp. JS614]
          Length = 527

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLC 55
           A+   SGG DS+   +       DR+  +  D+G   + E E    
Sbjct: 223 AICGLSGGVDSAVAAAIVQRAIGDRLTCVYVDHGLMRQGETEQVER 268


>gi|21673940|ref|NP_662005.1| argininosuccinate synthase [Chlorobium tepidum TLS]
 gi|30172875|sp|Q8KDE0|ASSY_CHLTE RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|21647081|gb|AAM72347.1| argininosuccinate synthase [Chlorobium tepidum TLS]
          Length = 401

 Score = 43.8 bits (101), Expect = 0.020,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 26/55 (47%), Gaps = 3/55 (5%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVR 57
          + K   A+  +SGG D+S  + W  D      +  ++ + GQ+ +V+   +  + 
Sbjct: 1  MSKEKIAVA-YSGGLDTSVMIKWLKDKYEGAEIVAVTGNLGQKMEVDNLEQKAIA 54


>gi|5734549|emb|CAB52775.1| unnamed protein product [Methanothermobacter thermautotrophicus]
          Length = 167

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 2/59 (3%)

Query: 9  PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             +L FSGG D+S C+    ++    V T   D GQ  + E+E    V +++      
Sbjct: 11 DKVVLAFSGGLDTSVCIKLLEEKYGMEVITACVDVGQ-PREEVERPARVAEELGNYKHH 68


>gi|78043578|ref|YP_359085.1| tRNA(Ile)-lysidine synthetase [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77995693|gb|ABB14592.1| tRNA(Ile)-lysidine synthetase [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 449

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 52/182 (28%), Gaps = 12/182 (6%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVET----LSFDYGQRNKVELECRLCVRKK 59
           +I      ++  SGG DS   L   L   + V+     +  ++G R +        V   
Sbjct: 17  MINPGEKVVVGVSGGPDSMALLFCLLKYREEVDFSLEVVHVNHGLRGRESDLDEELVLD- 75

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                   +      H+  L  L D+  +        +  +         G + I L   
Sbjct: 76  ------FTRKYGINFHVKKLDDLKDLRENLQAVARQKRY-EFFYEVLEKTGADKIALAHT 128

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
           A+      + NI+ G       G    R   IR + T     + S V        +    
Sbjct: 129 ASDVAETVMMNILRGAGTEGLCGIWPVRDRIIRPLYTVFRREVMSFVERKNIPYRVDSSN 188

Query: 180 TW 181
             
Sbjct: 189 LV 190


>gi|220931138|ref|YP_002508046.1| Argininosuccinate synthase [Halothermothrix orenii H 168]
 gi|219992448|gb|ACL69051.1| Argininosuccinate synthase [Halothermothrix orenii H 168]
          Length = 413

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 37/125 (29%), Gaps = 6/125 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +KK    +L +SGG D+S  + W  ++F   +   S + GQ    + +      K +   
Sbjct: 1   MKKVNKIVLAYSGGLDTSVSIKWLQEKFNAEIIAYSANVGQD---DNDWNQIKEKALKAG 57

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
             K       +  +       +   +             L    +  R +         A
Sbjct: 58  ASKVYIDDIREEFIKNYAFNSLK--ANGLYEGKYPLATALSRPLIAKRMVEVAHQEGAEA 115

Query: 124 YRLGI 128
              G 
Sbjct: 116 VAHGC 120


>gi|91976746|ref|YP_569405.1| GMP synthase [Rhodopseudomonas palustris BisB5]
 gi|91683202|gb|ABE39504.1| GMP synthase (glutamine-hydrolyzing) [Rhodopseudomonas palustris
           BisB5]
          Length = 556

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 54/183 (29%), Gaps = 17/183 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+       +   D++  +  D+G   K E        K +V+L     
Sbjct: 260 KVICGLSGGVDSAVAAVLIHEAIGDQLTCVFVDHGLLRKDEG-------KSVVDLFRHHY 312

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +            LG +             +        +              A  L  
Sbjct: 313 NIPLVHVDAADTFLGALKGV-------TDPEQKRKIIGKLFIDVFDAEAKVVGGADFLAQ 365

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+    +      TI++      L    ++ +  PL  L K E   L +++G
Sbjct: 366 GTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRALGRELG 423

Query: 189 GQD 191
             D
Sbjct: 424 LPD 426


>gi|325269878|ref|ZP_08136488.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
          [Prevotella multiformis DSM 16608]
 gi|324987851|gb|EGC19824.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
          [Prevotella multiformis DSM 16608]
          Length = 456

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 22/63 (34%), Gaps = 1/63 (1%)

Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
          L+  SGG DS   L    +   RVE +  ++ Q    E        +++          +
Sbjct: 22 LVALSGGADSVALLLTLKELGYRVEAVHCNF-QLRGEESLHDERFCQELCRRENIPLHKV 80

Query: 72 GED 74
            D
Sbjct: 81 HFD 83


>gi|315605031|ref|ZP_07880085.1| GMP synthase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313310|gb|EFU61373.1| GMP synthase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 526

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 50/184 (27%), Gaps = 11/184 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DSS   +       D++     D+G     E E          ++   +  
Sbjct: 224 VICALSGGVDSSVAAALVHRAVGDQLTCFFIDHGLLRAGERE----------QVEGDYAR 273

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   I        +S  +       K +                ++     A      
Sbjct: 274 GMGIRVITCDESERFLSALAGVTEPEAKRKIIGREFIRSFEAAQKQVIEEVGAAGGEVKF 333

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +    +  PL  L K E   + +++G 
Sbjct: 334 LVQGTLYPDVVESGGGEGAANIKSHHNVGGLPEDMTFELVEPLRTLFKDEVRAVGRELGL 393

Query: 190 QDLV 193
            D +
Sbjct: 394 PDYL 397


>gi|307594745|ref|YP_003901062.1| GMP synthase (glutamine-hydrolyzing) [Vulcanisaeta distributa DSM
           14429]
 gi|307549946|gb|ADN50011.1| GMP synthase (glutamine-hydrolyzing) [Vulcanisaeta distributa DSM
           14429]
          Length = 374

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 54/184 (29%), Gaps = 24/184 (13%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             A+   SGG DS+T          DR+  +  D G     E              + + 
Sbjct: 19  KCAVAAISGGVDSTTAAVLVRRAIGDRLRAVFIDTGFMRLNEP-----------AHVKEL 67

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +    ++            L+     +I+   +    +           + +A   G
Sbjct: 68  LRDVLPIEVIDARDRFYREMLGLSDAEEKRIRFREVFYEVL-----------SGVAREYG 116

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETA-INLGMESHVTVHTPLMWLKKYETWKLAQD 186
              +V G    D+             +E   I+   +    +  PL  L K +  +LA+ 
Sbjct: 117 CDWLVQGTIAPDWIETRGGIKTQHNVLEQIGIDTVSKYGFKLIEPLRELYKDQVRELAKA 176

Query: 187 IGGQ 190
           +G  
Sbjct: 177 LGVP 180


>gi|298368794|ref|ZP_06980112.1| tRNA(Ile)-lysidine synthase [Neisseria sp. oral taxon 014 str.
          F0314]
 gi|298282797|gb|EFI24284.1| tRNA(Ile)-lysidine synthase [Neisseria sp. oral taxon 014 str.
          F0314]
          Length = 430

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 19/61 (31%), Gaps = 5/61 (8%)

Query: 1  MNDIIKKAPSAL-LLFSGGQDSSTCLSWALD----RFDRVETLSFDYGQRNKVELECRLC 55
          MN+    +   + +  SGG DS   L             +  +   +G     +     C
Sbjct: 1  MNETPSLSGKDIEVGLSGGLDSVVLLHMLSRLRQQHGFSLRAVHVHHGLSPNADDWAEFC 60

Query: 56 V 56
          +
Sbjct: 61 L 61


>gi|269468813|gb|EEZ80417.1| asparagine synthase, glutamine-hydrolyzing [uncultured SUP05
           cluster bacterium]
          Length = 588

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 49/169 (28%), Gaps = 8/169 (4%)

Query: 13  LLFSGGQDSSTCLSWALDRFD-RVETLSF---DYGQRNKVELECRLCVRKKIVELMPKWK 68
           +L SGG DSS  ++   +     + T S    D G     E E    +  +      K+ 
Sbjct: 261 VLLSGGLDSSLLVALLAEAGHQDIRTFSIGFEDVGDEEGSEFEYSDQIVNQFNTRHEKYV 320

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            S  +     L  LG+   +     V        L +  V     + L          G 
Sbjct: 321 VSNSQ----VLPRLGEAVANMNEPMVGQDAVAFYLLSEQVSKHIKVVLSGQGADEAFAGY 376

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                   E+        +H   R  E  +      + T +    WL K
Sbjct: 377 FWYPRMQAESGTEVERFSKHYVDRPYEEYLQTVHAKYHTGNHTDAWLNK 425


>gi|239625398|ref|ZP_04668429.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519628|gb|EEQ59494.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 410

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 59/212 (27%), Gaps = 23/212 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L +SGG D++T + W  +     V     D GQ N+++         K+     
Sbjct: 1   MKEKVILAYSGGLDTTTIIPWLKENFGYEVICCCIDCGQGNELDGLDERA---KLSGASK 57

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            + + L +D             + +   V                           +A +
Sbjct: 58  LYIEDLVDD----------FCDNYIMPCVKANAVYEYKYLLGTSMARPAIAKCLVDIARK 107

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G T I  G                  A +  I +       V    +  ++ E      
Sbjct: 108 EGATAICHGATGKGNDQIRFELGIKALAPDLKI-IAPWRMTDVW--TIQSREDEI----- 159

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
           +   Q  ++L     ++ Y   R+  +    G
Sbjct: 160 EYCKQHGIDLPFSADNS-YSRDRNLWHISHEG 190


>gi|162148917|ref|YP_001603378.1| GMP synthase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161787494|emb|CAP57090.1| gmp synthase [glutamine-hydrolyzing] (glutamin amidotransferase)
           (gmp synthetase) [Gluconacetobacter diazotrophicus PAl
           5]
          Length = 562

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 52/184 (28%), Gaps = 17/184 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DSS       +   D++  +  D G     E      V K           
Sbjct: 267 VICGLSGGVDSSVAAVLIHEAIGDQLTCIFVDPGILRAGE---AEEVVKTFRGRFNI--- 320

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                  L      D+  S+L      +I+   +   FV                  G  
Sbjct: 321 ------KLVHRDASDLFLSALEGVTDPEIKRKTIGRLFVEVFEEQAAKLGGADFLAQGTL 374

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                    +   +      TI++      L     + +  PL  L K E  +L +++G 
Sbjct: 375 Y----PDVIESVSFTGGPSVTIKSHHNVGGLPDRMKMQLVEPLRELFKDEVRELGRELGI 430

Query: 190 QDLV 193
            + +
Sbjct: 431 PEAI 434


>gi|170744674|ref|YP_001773329.1| argininosuccinate synthase [Methylobacterium sp. 4-46]
 gi|168198948|gb|ACA20895.1| Argininosuccinate synthase [Methylobacterium sp. 4-46]
          Length = 413

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 32/80 (40%), Gaps = 8/80 (10%)

Query: 6  KKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIV--- 61
          K+    +L +SGG D+S  L W        V T + D GQ  ++E        + +    
Sbjct: 7  KRVQKVVLAYSGGLDTSIILKWLQTTYGCEVVTFTADLGQGEELEP--ARRKAELLGIKP 64

Query: 62 --ELMPKWKDSLGEDHILPL 79
              +   ++    D++ P+
Sbjct: 65 ENIFIEDLREEFVRDYVFPM 84


>gi|145344734|ref|XP_001416881.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577107|gb|ABO95174.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 638

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 52/190 (27%), Gaps = 12/190 (6%)

Query: 13  LLFSGGQDSSTCLSWALDR-------FDRVETLS-FDYGQRNKVELECRLCVRKKIVELM 64
           +L SGG DSS   S A+ +       +   E +  F  G +   +L     V +++  + 
Sbjct: 243 VLLSGGLDSSLITSIAVRQRKLAKNTYGADEPVHSFSIGIKGAPDLVAARKVAEQLGTIH 302

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            +      E+ +  L  +  I H    + V   +    L          + L        
Sbjct: 303 HEV-HFTPEEALDALPDV--IWHLETFEQVRASVPMYLLSRHIKSLGFKMVLSGEGAD-E 358

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G                   R          +     +          L   +   LA
Sbjct: 359 LFGGYLYFHKAPNPAEFHAECRRKTMRLHQWDVLRANKSTMSWGIEVRTPLLSQQVIDLA 418

Query: 185 QDIGGQDLVN 194
            ++  +D + 
Sbjct: 419 MNMRPEDKMI 428


>gi|114705909|ref|ZP_01438812.1| argininosuccinate synthase [Fulvimarina pelagi HTCC2506]
 gi|114538755|gb|EAU41876.1| argininosuccinate synthase [Fulvimarina pelagi HTCC2506]
          Length = 405

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 56/211 (26%), Gaps = 15/211 (7%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM-PK 66
              +L +SGG D+S  L W        V T + D GQ  ++        R  + ++    
Sbjct: 8   KKVVLAYSGGLDTSIILKWLQTELNAEVVTFTADLGQGEELGPAREKAERAGVKDIYIED 67

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            ++    D + P+     +   +     ++           +  R +         A   
Sbjct: 68  VREEFCRDFVFPMFRANAVYEGTYLLGTSIARP-------LISKRLVEIARETGADAIAH 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G T         + S Y       + A          + +          K +       
Sbjct: 121 GATGKGNDQVRFELSAYALDPDIKVIAPWRDWEFKSRTELLDFAE-----KNQITVTKDK 175

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
            G      +     H+   GK  +    G  
Sbjct: 176 RGEAPFS-VDANLLHSSSEGKVLEDPNEGPP 205


>gi|326772093|ref|ZP_08231378.1| PE-PGRS family protein [Actinomyces viscosus C505]
 gi|326638226|gb|EGE39127.1| PE-PGRS family protein [Actinomyces viscosus C505]
          Length = 556

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 19/49 (38%), Gaps = 1/49 (2%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           L+  SGG DS     W      R   ++F YG     E+     V + +
Sbjct: 207 LVPLSGGLDSRLLAVWLKRHGARDV-VTFTYGVPGSSEVAISRGVAEAL 254


>gi|317154147|ref|YP_004122195.1| PP-loop domain-containing protein [Desulfovibrio aespoeensis
          Aspo-2]
 gi|316944398|gb|ADU63449.1| PP-loop domain protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 309

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 16/41 (39%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
           +       L+  SGG+DS + +     +   V  L  D G
Sbjct: 42 KMFTHEERILVALSGGKDSLSLMLELAAQGYDVTGLHIDLG 82


>gi|289432941|ref|YP_003462814.1| argininosuccinate synthase [Dehalococcoides sp. GT]
 gi|288946661|gb|ADC74358.1| argininosuccinate synthase [Dehalococcoides sp. GT]
          Length = 406

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 25/64 (39%), Gaps = 3/64 (4%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +   +L +SGG D+S  + W  ++    V  ++ D G   + +         K+     
Sbjct: 1  MSEKVVLAYSGGLDTSAAVKWLQEKYGMDVIAVTIDVGN--EKDFTLIKEKALKVGAKKA 58

Query: 66 KWKD 69
            +D
Sbjct: 59 YVRD 62


>gi|167740138|ref|ZP_02412912.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei 14]
          Length = 311

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 40/182 (21%), Gaps = 10/182 (5%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS       ++   V  L     + +     C         + +     +    
Sbjct: 1   MSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQ-----DWIDVVSVADLIG 55

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
             +            +      +      PN  V     I        A  LG   I  G
Sbjct: 56  IDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLGAQTIATG 115

Query: 135 VCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                               T         L          PL  + K    ++A  IG 
Sbjct: 116 HYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTRVREIAAQIGL 175

Query: 190 QD 191
            +
Sbjct: 176 PN 177


>gi|297618762|ref|YP_003706867.1| N-acetyl sugar amidotransferase [Methanococcus voltae A3]
 gi|297377739|gb|ADI35894.1| N-acetyl sugar amidotransferase [Methanococcus voltae A3]
          Length = 381

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 25/80 (31%), Gaps = 2/80 (2%)

Query: 7   KAPS--ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K      ++  SGG DS+           R   +  D G  + + ++       K+   +
Sbjct: 66  KGKKYDCIIGVSGGADSTYVAYLVKKLGLRPLAVHVDNGWNSDLSVKNIENTLNKLGIEL 125

Query: 65  PKWKDSLGEDHILPLAILGD 84
                   E   L L+ +  
Sbjct: 126 YTHVLDWDEFRDLQLSYIKS 145


>gi|157413817|ref|YP_001484683.1| hypothetical protein P9215_14841 [Prochlorococcus marinus str. MIT
           9215]
 gi|157388392|gb|ABV51097.1| Hypothetical protein P9215_14841 [Prochlorococcus marinus str. MIT
           9215]
          Length = 421

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 24/208 (11%), Positives = 57/208 (27%), Gaps = 25/208 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL-----------ECRLCVRK 58
             ++L SGG DS+     +      +E ++   G ++ ++            +    V K
Sbjct: 148 KKVILLSGGLDSTVVAYNSSKYLSNIEFITC--GVKHNLDSKYDLKSDNNDCKRAKEVAK 205

Query: 59  KIVELM-------PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
           ++   +           +SL     L         H +       +    N P   V   
Sbjct: 206 ELGVKISEFYLREEDVLNSLNNVIRLCCDWRDFNVHCASFNYEIAQYISRNFPQNTVVLT 265

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
             +   + A     +    I     +   S         +      I   +  +  +   
Sbjct: 266 GDLMNEYFADYTEVIYENQIYYPQLKIKRSSRRRFFKRGLDTSNREI--AIFENFNIKCF 323

Query: 172 LMWLKKYETWKLAQDIGGQDLVNLILEE 199
             +   Y+     + IG ++  +   + 
Sbjct: 324 QPYSSLYD---CYEKIGIENFEDKDFKY 348


>gi|124516570|gb|EAY58078.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1
           [Leptospirillum rubarum]
          Length = 361

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 48/184 (26%), Gaps = 13/184 (7%)

Query: 15  FSGGQDSSTCLSWALDRFDRVET----LSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            SGG DS+       +    V      +  +     +   E      ++    +P  K  
Sbjct: 3   LSGGVDSTVAALLLKEAGFDVYGAIVEIWSENSSGGRSGEEREKPWFERACCHLPMVKFL 62

Query: 71  LGEDHILPL--AILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             E   +P             +         +   PN        I +      A +  I
Sbjct: 63  CEEYLHIPYVQIDQKQNFQEKIVDVFREGYHNGVTPNPCTDCNAEIKIKTLIDWAEQQKI 122

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-------ESHVTVHTPLMWLKKYETW 181
           + +  G    ++    +      +A++   +               V  PL    K +  
Sbjct: 123 SYVATGHYAKNHYSVQNRLWGIAQALDRKKDQSYFLSRVPEHVLRKVLFPLGHWTKDKVR 182

Query: 182 KLAQ 185
           + A+
Sbjct: 183 EFAR 186


>gi|148651832|ref|YP_001278925.1| GMP synthase [Psychrobacter sp. PRwf-1]
 gi|148570916|gb|ABQ92975.1| GMP synthase (glutamine-hydrolyzing) [Psychrobacter sp. PRwf-1]
          Length = 532

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 56/189 (29%), Gaps = 12/189 (6%)

Query: 9   PSALLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +LL  SGG DSS   +       D++  +  D G    + L     V +   E M  
Sbjct: 228 DKQVLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDNG---LLRLHEGDQVMQVFAENMGV 284

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +  +     A+ G+    +  K +          + F      I           L
Sbjct: 285 KVVRVDAEDRFLSALAGESEPEAKRKII-----GKTFIDVFADAARDISQGSDGKPVEFL 339

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+  S         I++      L  +    +  PL  L K E  KL   
Sbjct: 340 AQGTIYPDVIESAKSHQGKAHV--IKSHHNVGGLPDDLQFELVEPLRDLFKDEVRKLGIA 397

Query: 187 IGGQDLVNL 195
           +G    +  
Sbjct: 398 LGLPHKMIY 406


>gi|57233965|ref|YP_181972.1| argininosuccinate synthase [Dehalococcoides ethenogenes 195]
 gi|119361269|sp|Q3Z727|ASSY_DEHE1 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|57224413|gb|AAW39470.1| argininosuccinate synthase [Dehalococcoides ethenogenes 195]
          Length = 406

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 25/64 (39%), Gaps = 3/64 (4%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +   +L +SGG D+S  + W  ++    V  ++ D G   + +         K+     
Sbjct: 1  MSEKVVLAYSGGLDTSAAVKWLQEKYGMDVIAVTIDVGN--EKDFTLIKEKALKVGAKKA 58

Query: 66 KWKD 69
            +D
Sbjct: 59 YVRD 62


>gi|20088950|ref|NP_615025.1| hypothetical protein MA0051 [Methanosarcina acetivorans C2A]
 gi|19913797|gb|AAM03505.1| predicted protein [Methanosarcina acetivorans C2A]
          Length = 590

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 3/57 (5%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIV 61
           K+    ++  SGG DS   +          V  +S  YG++   E E    V + + 
Sbjct: 204 KQGKRLIVPLSGGLDSRIIVGMLKRLGVNDVICMS--YGRKGSRESEISRHVAETLG 258


>gi|73748944|ref|YP_308183.1| argininosuccinate synthase [Dehalococcoides sp. CBDB1]
 gi|147669711|ref|YP_001214529.1| argininosuccinate synthase [Dehalococcoides sp. BAV1]
 gi|119361270|sp|Q3ZYG0|ASSY_DEHSC RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|189046387|sp|A5FQ73|ASSY_DEHSB RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|73660660|emb|CAI83267.1| argininosuccinate synthase [Dehalococcoides sp. CBDB1]
 gi|146270659|gb|ABQ17651.1| argininosuccinate synthase [Dehalococcoides sp. BAV1]
          Length = 406

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 25/64 (39%), Gaps = 3/64 (4%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +   +L +SGG D+S  + W  ++    V  ++ D G   + +         K+     
Sbjct: 1  MSEKVVLAYSGGLDTSAAVKWLQEKYGMDVIAVTIDVGN--EKDFTLIKEKALKVGAKKA 58

Query: 66 KWKD 69
            +D
Sbjct: 59 YVRD 62


>gi|38233202|ref|NP_938969.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Corynebacterium diphtheriae NCTC 13129]
 gi|44887924|sp|P60499|GUAA_CORDI RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|38199461|emb|CAE49112.1| GMP synthase [glutamine-hydrolysing] [Corynebacterium diphtheriae]
          Length = 525

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 55/185 (29%), Gaps = 12/185 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            A+   SGG DS+   +       DR+  +  D+G     E E          ++   + 
Sbjct: 223 RAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGERE----------QVQTDFV 272

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            + G   +        ++  +       K +           R +  ++  A     +  
Sbjct: 273 AATGAKLVTVDEREAFLNKLAGVTEPEAKRKAIGAEFIRSFERAVAGILDDAPEGSTVD- 331

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +    +  PL  L K E   + +++G
Sbjct: 332 FLVQGTLYPDVVESGGGSGTANIKSHHNVGGLPDDVEFQLVEPLRLLFKDEVRAVGRELG 391

Query: 189 GQDLV 193
             + +
Sbjct: 392 LPEEI 396


>gi|322802160|gb|EFZ22595.1| hypothetical protein SINV_00348 [Solenopsis invicta]
          Length = 417

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 18/181 (9%), Positives = 49/181 (27%), Gaps = 6/181 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              + ++  SGG DS+        +   V  +         +  E   C+ +K  +    
Sbjct: 1   MMRNVVVGISGGVDSAVAAFLLKIKGFNVTGVFMKNW---DIRDETGKCMVEKDYDDARW 57

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN--IIFLVFAATLAY 124
             D L +  ++ +  + +  +   +  V             +  +N         A   +
Sbjct: 58  ICDKL-KIPLIQVNFVKEYWNEVFSDIVEKYQNGYTPNPDILCNKNIKFDKFFHLARNRF 116

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           +            +  +   +   +  + +     L  +      T  +     ET +  
Sbjct: 117 QADAIATGHYAKTSFGAYLENYEANKSKYLLNVRLLQAQDSNKDQTFFLSQVPQETLRHC 176

Query: 185 Q 185
            
Sbjct: 177 M 177


>gi|299783662|gb|ADJ41660.1| Putative uncharacterized protein [Lactobacillus fermentum CECT
           5716]
          Length = 275

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 22/174 (12%), Positives = 51/174 (29%), Gaps = 6/174 (3%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRK 58
           +   + +    L+ FSGG DS+  L  AL     + V  +  +       E    + + +
Sbjct: 9   LTAALSQYNKVLVAFSGGIDSTVVLDAALKTLGKENVLAVVANSDLFTDEEYTKAMNLAQ 68

Query: 59  KIVE-LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI---I 114
           ++   ++    D L  D I             +      +++DN+  +  + G  +    
Sbjct: 69  EMGATVLGTTLDYLSNDDIKNNRASSWYWMKKMFYQKMNELKDNSNCDVVLDGMIMDDKN 128

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV 168
                       G  +++              R   +       +  + S    
Sbjct: 129 DFRPGLRARDEEGAVSVLQVANIYKSDVRDMAREAGLSNWNKVASCSVSSRFEY 182


>gi|283769381|ref|ZP_06342280.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bulleidia extructa W1219]
 gi|283104038|gb|EFC05422.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bulleidia extructa W1219]
          Length = 378

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 22/194 (11%), Positives = 45/194 (23%), Gaps = 20/194 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDY----------GQRNKVELECRLCVRKK 59
             L+  SGG DS+        +   V                 G     +  C       
Sbjct: 2   KILVGLSGGVDSAIAAYLLRQQGHEVTCAFMRNWDSVANGDFSGNPTLNDPVCSQE--SD 59

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
             +              +    + +         +    +        +  R  I     
Sbjct: 60  YADAQAVADKLGLPLLRVD--FIKEYWDDVFQTFLNDYKKGRTPNPDILCNR-YIKFAEF 116

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPD---CRHDTIRAIETAINLGMESHV--TVHTPLMW 174
              A + G   +  G               + D     ++     +   V   V  PL  
Sbjct: 117 MNFAQKKGFETVATGHYVKLGYENGHGVLMKADDRNKDQSYFLAEVHREVLDHVVFPLAE 176

Query: 175 LKKYETWKLAQDIG 188
           ++K +   +A ++G
Sbjct: 177 IEKPKVRDMAFELG 190


>gi|262306073|gb|ACY45629.1| gln amidotransferase [Lynceus sp. 'Lyn']
          Length = 193

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 24/69 (34%), Gaps = 6/69 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFD------RVETLSFDYGQRNKVELECRLCVRKKIV 61
               L+L SGG DS+ C +             RV  +  D G   K E E  +   + + 
Sbjct: 44  QKVVLMLVSGGVDSAVCAALLHKALRNSGGESRVRAIHIDNGFLRKNESEQVVDSLRSLG 103

Query: 62  ELMPKWKDS 70
             +   +  
Sbjct: 104 LNLKVIQAR 112


>gi|260427551|ref|ZP_05781530.1| GMP synthase [Citreicella sp. SE45]
 gi|260422043|gb|EEX15294.1| GMP synthase [Citreicella sp. SE45]
          Length = 523

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 15/36 (41%), Gaps = 1/36 (2%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
              +   SGG DSS       +   D++  +  D+G
Sbjct: 226 KKVICALSGGVDSSVTGILLHEAIGDQLTCVFVDHG 261


>gi|228950612|ref|ZP_04112747.1| tRNA(Ile)-lysidine synthase [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|229077353|ref|ZP_04210023.1| tRNA(Ile)-lysidine synthase [Bacillus cereus Rock4-2]
 gi|228705950|gb|EEL58266.1| tRNA(Ile)-lysidine synthase [Bacillus cereus Rock4-2]
 gi|228809087|gb|EEM55571.1| tRNA(Ile)-lysidine synthase [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 480

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 23/197 (11%), Positives = 52/197 (26%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D++K   + ++  SGG DS   L + L++                          K +V 
Sbjct: 21  DVLKNDSTIVVGVSGGPDSLALLYYLLEK--------------------RAEKQLKIVVA 60

Query: 63  LMPKW--KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +      D   ED      +  ++     T  + +                     F  
Sbjct: 61  HVDHMFRGDESHEDLRFVQGLCEELGIICETIRINVSQYQQQYGMNAQVAARECRYAFLE 120

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKK 177
            +  +     + +G    D       R       +    + ++       +  PL+ + K
Sbjct: 121 RIMKKYDARYVALGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGYLIRPLLGVTK 180

Query: 178 YETWKLAQDIGGQDLVN 194
            E       +     ++
Sbjct: 181 EEIVDYCNKLNLMPRID 197


>gi|156935294|ref|YP_001439210.1| hypothetical protein ESA_03151 [Cronobacter sakazakii ATCC
          BAA-894]
 gi|156533548|gb|ABU78374.1| hypothetical protein ESA_03151 [Cronobacter sakazakii ATCC
          BAA-894]
          Length = 434

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 18/52 (34%), Gaps = 5/52 (9%)

Query: 12 LLLFSGGQDSSTCLSWA--LDRFD---RVETLSFDYGQRNKVELECRLCVRK 58
          L+ +SGG DS+  L     L       R+  +   +G     +     C   
Sbjct: 16 LVAYSGGLDSTVLLHQLVRLRETHPELRLRAIHVHHGISPNADRWAAHCQAH 67


>gi|149926802|ref|ZP_01915061.1| transcriptional regulator, GntR family protein [Limnobacter sp.
          MED105]
 gi|149824354|gb|EDM83572.1| transcriptional regulator, GntR family protein [Limnobacter sp.
          MED105]
          Length = 330

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 7/47 (14%), Positives = 19/47 (40%)

Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
          ++ +SGG DS+  L         +  +  ++  + + +     C  +
Sbjct: 23 VVAYSGGVDSTVLLHALHVMGLPLHAVHVNHQIQTQADAWEAHCKSQ 69


>gi|149909581|ref|ZP_01898234.1| asparagine synthetase B (glutamine-hydrolyzing) [Moritella sp.
           PE36]
 gi|149807285|gb|EDM67238.1| asparagine synthetase B (glutamine-hydrolyzing) [Moritella sp.
           PE36]
          Length = 553

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 48/187 (25%), Gaps = 14/187 (7%)

Query: 13  LLFSGGQDSSTCLS----WALDR---FDRVET----LS-FDYGQRNKVELECRLCVRKKI 60
           +L SGG DSS   +    +A  R     + E     L  F  G     +L     V   +
Sbjct: 232 VLLSGGLDSSVISAVTQLYAKRRIEDGGKTEAWWPQLHSFSVGLNGSPDLAAAQKVADHL 291

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +     +   ++ I  L  +     +     +        +          + L    
Sbjct: 292 GTIHHSI-EFTVQEGIDALRDVIYHIETYDVTTIRASTPMYLMARKIKAMGIKMVLSGEG 350

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
                 G           ++      +   +   +        +   +   + +L K E 
Sbjct: 351 ADELFGGYLYFHKAPNAKEFHEETVRKVSKLHMFDCLRANKSMAAWGIEARVPFLDK-EF 409

Query: 181 WKLAQDI 187
              A  +
Sbjct: 410 IDTAMRL 416


>gi|110639453|ref|YP_679662.1| argininosuccinate synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|110282134|gb|ABG60320.1| argininosuccinate synthetase [Cytophaga hutchinsonii ATCC 33406]
          Length = 398

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 50/178 (28%), Gaps = 13/178 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L FSGG D++ C  +  +     + T   + G  +K EL        ++     
Sbjct: 1   MKKKVVLAFSGGLDTTYCAKYLSEDLGYELHTAIVNTGGFSKEELADIEKKAYELGVTSH 60

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                        L I+       +   V   I  NN     V    +   +  A  A +
Sbjct: 61  TT-----------LDIIEKYYAECVKYMVYGNILRNNTYPLSVSAERVFQAMAIAEHAKK 109

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM-WLKKYETWK 182
           +G T +  G                I      I   +          + +LKK    +
Sbjct: 110 VGATAVAHGSTGAGNDQVRFDVVFMIMNPGIEIITPIRDMKLSREAEIEYLKKKGVVR 167


>gi|323159377|gb|EFZ45362.1| GMP synthase [Escherichia coli E128010]
          Length = 525

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVLDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IVYVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|310764763|gb|ADP09713.1| GMP synthase [Erwinia sp. Ejp617]
          Length = 526

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 50/185 (27%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS           DR+  +  D G    + L     V +   +    
Sbjct: 228 NDKVILGLSGGVDSSVTAMLLHRAIGDRLTCVFVDNG---LLRLNEAEQVMEMFGDHFGL 284

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +  ++    A+ G     +  K +     +                          
Sbjct: 285 NIIHVAAENRFLDALAGTDEPEAKRKIIGRVFVEVFDEEATKLSDVKWLAQGT------- 337

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                 I     + +     +   I++      L  E  + +  PL  L K E  K+  +
Sbjct: 338 ------IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKLGLVEPLKELFKDEVRKIGLE 391

Query: 187 IGGQD 191
           +G   
Sbjct: 392 LGLPH 396


>gi|262306033|gb|ACY45609.1| gln amidotransferase [Derocheilocaris typicus]
          Length = 196

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 2/46 (4%)

Query: 8  APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELE 51
            + L+L SGG DS+ C +         ++  +  D G   K E +
Sbjct: 43 NRNVLMLMSGGVDSTACAALLQKSLNQRQIFAVHIDNGFMRKSESQ 88


>gi|227530110|ref|ZP_03960159.1| GMP synthase (glutamine-hydrolyzing) [Lactobacillus vaginalis ATCC
           49540]
 gi|227349978|gb|EEJ40269.1| GMP synthase (glutamine-hydrolyzing) [Lactobacillus vaginalis ATCC
           49540]
          Length = 517

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 53/186 (28%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS           D++  +  D+G   K E +      + +  L    
Sbjct: 223 KKVILGLSGGVDSSVTAVLIHKAIGDQLTCIFVDHGLLRKNEAD------QVMKALNKDL 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             ++ +       +      +       +  ++                 F         
Sbjct: 277 GVNIIKVDAADRFLGKLKGVTDPETKRKIIGKEFIEV-------------FNEEAKKIPD 323

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +  G   TD          TI++      L  +    +  PL  L K ET +L + +
Sbjct: 324 ADFLAQGTLYTDVIESGTDTAQTIKSHHNVGGLPKKLGFKLIEPLRKLFKDETRELGEKL 383

Query: 188 GGQDLV 193
           G    +
Sbjct: 384 GIPHEL 389


>gi|187735150|ref|YP_001877262.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Akkermansia muciniphila ATCC BAA-835]
 gi|205811102|sp|B2UPK4|MNMA_AKKM8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|187425202|gb|ACD04481.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Akkermansia muciniphila ATCC BAA-835]
          Length = 357

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 52/187 (27%), Gaps = 11/187 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWK 68
             L+  SGG DSS   +  +++   V      ++     +  EC     + I + +   K
Sbjct: 3   RILVGLSGGVDSSVAAALLVEQGHDVVGAYMKNWVNDEGIPGECPWE--QDIQDALAVAK 60

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  E  ++ L        + +   +    +    PN  V     +        A   G 
Sbjct: 61  TTGIEFRVIDLVD---EYRARIVNYLIEGYRAGYTPNPDVLCNREMKFGVFLDYALEQGF 117

Query: 129 TNIVIGVCETDYSGYP-----DCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             +  G                 R            +  +       PL  L K E   L
Sbjct: 118 DYVATGHYARRMDTPQGAFILRGRDPNKDQSYFLSLMRPDQIARAVFPLGDLLKPEVRVL 177

Query: 184 AQDIGGQ 190
           A+  G  
Sbjct: 178 AEKYGLP 184


>gi|154484342|ref|ZP_02026790.1| hypothetical protein EUBVEN_02055 [Eubacterium ventriosum ATCC
          27560]
 gi|149734819|gb|EDM50736.1| hypothetical protein EUBVEN_02055 [Eubacterium ventriosum ATCC
          27560]
          Length = 263

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 10/75 (13%), Positives = 28/75 (37%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          +  +K P+  +  SGG DS   +  A      V+        + + E +    + +++  
Sbjct: 21 EFFEKYPNVAIALSGGVDSVFLVYMAKKYAKSVKAYFVKSVFQPEFEKKDAEKICRQLGV 80

Query: 63 LMPKWKDSLGEDHIL 77
           +      +  + ++
Sbjct: 81 DLKILNVDVLSNKLV 95


>gi|145594640|ref|YP_001158937.1| asparagine synthase (glutamine-hydrolyzing) [Salinispora tropica
           CNB-440]
 gi|145303977|gb|ABP54559.1| asparagine synthase (glutamine-hydrolyzing) [Salinispora tropica
           CNB-440]
          Length = 536

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 19/55 (34%), Gaps = 2/55 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++ SGG DSS  L  A +       ++   G     +L     + K +       
Sbjct: 232 VVLSGGLDSSLALLHARELHPDCVAVTV--GVPESPDLLYARRLAKDLGVPHEVV 284


>gi|20094059|ref|NP_613906.1| hypothetical protein MK0621 [Methanopyrus kandleri AV19]
 gi|19887042|gb|AAM01836.1| Predicted RNA modification enzyme consisting of a
           3-phosphoadenosine 5-phosphosulfate sulfotransferase
           fused to RNA-binding PUA domain [Methanopyrus kandleri
           AV19]
          Length = 524

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 1/68 (1%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
           FSGG+DS   L  A +       L  D G      +E      + +   +   +      
Sbjct: 242 FSGGKDSLVTLVVAAEAGVE-RALFVDTGMELPETVEAADRAAEAVGIDVEIVEGDPEIF 300

Query: 75  HILPLAIL 82
           H +  A+L
Sbjct: 301 HRVTEALL 308


>gi|4836940|gb|AAD30642.1|AC006085_15 Unknown protein [Arabidopsis thaliana]
 gi|119935887|gb|ABM06024.1| At1g51310 [Arabidopsis thaliana]
          Length = 421

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 14/118 (11%), Positives = 26/118 (22%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + +K     +L SGG DSS  L                   +   E     C  +  ++ 
Sbjct: 1   MPEKPLRVAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEGFENFWNQCPWEDDLKY 60

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
                + +     +                   +      P+     R        A 
Sbjct: 61  AKHVCEQVDVPLEVVHLTDEYWERVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFMDAI 118


>gi|49481365|ref|YP_038679.1| argininosuccinate synthase [Bacillus thuringiensis serovar
          konkukian str. 97-27]
 gi|68566243|sp|Q6HCP7|ASSY_BACHK RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|49332921|gb|AAT63567.1| argininosuccinate synthase (citrulline-asparate ligase) [Bacillus
          thuringiensis serovar konkukian str. 97-27]
          Length = 401

 Score = 43.8 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 17/36 (47%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
              +L +SGG D+S  + W  ++   +  L  D G
Sbjct: 3  KKKVVLAYSGGLDTSVAIKWLQEKNYDIIALCLDLG 38


>gi|325955278|ref|YP_004238938.1| GMP synthase (glutamine-hydrolyzing) [Weeksella virosa DSM 16922]
 gi|323437896|gb|ADX68360.1| GMP synthase (glutamine-hydrolyzing) [Weeksella virosa DSM 16922]
          Length = 510

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 53/186 (28%), Gaps = 18/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS           D++  +  D G            + +K  +   K 
Sbjct: 214 KKVILGLSGGVDSSVAAVLIHRAIGDQLTCIFVDTG------------LLRK--DEGKKV 259

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            ++ G+   + + ++                +                       A  L 
Sbjct: 260 MENYGKHFQMNIKMVDASERFLSNLKGIDDPEAKRKSIGHDFVAVFDEESKKFGDASFLA 319

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I   V E+     P      I++      L  E  +T+  PL  L K E  ++   +
Sbjct: 320 QGTIYPDVIESQSVKGPSAT---IKSHHNVGGLPDEMKLTLLEPLRELFKDEVRQVGVAL 376

Query: 188 GGQDLV 193
           G    +
Sbjct: 377 GIPREL 382


>gi|320451000|ref|YP_004203096.1| GMP synthase (glutamine-hydrolyzing) [Thermus scotoductus SA-01]
 gi|320151169|gb|ADW22547.1| GMP synthase (glutamine-hydrolyzing) [Thermus scotoductus SA-01]
          Length = 503

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 46/188 (24%), Gaps = 19/188 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               LL  SGG DSST              +  D+G     E E      K +   +   
Sbjct: 209 EDRVLLAVSGGVDSSTLALLLAKARVNHLAVFVDHGLLRLGEREEVEGALKALGVNLRVV 268

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                         L  +      +     I    +       R      F A       
Sbjct: 269 DAR--------ERFLTALKGVEDPEEKRRIIGREFVEVFSQVAREAGPFRFLA------- 313

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                  +         +     I++      L  +    +  P   L K E  +LA  +
Sbjct: 314 ----QGTLYPDVIESAGEPGAAKIKSHHNVGGLPEDLKFELLEPFRLLFKDEVRELALLL 369

Query: 188 GGQDLVNL 195
           G  D + L
Sbjct: 370 GLPDPIRL 377


>gi|227819422|ref|YP_002823393.1| sulfate adenylyltransferase subunit 2 [Sinorhizobium fredii NGR234]
 gi|227338421|gb|ACP22640.1| sulfate adenylyltransferase subunit 2 [Sinorhizobium fredii NGR234]
          Length = 299

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 22/169 (13%), Positives = 49/169 (28%), Gaps = 7/169 (4%)

Query: 12  LLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++L+S G+DSS  L  AL  F         L  D   + +  +  R  + +++   +   
Sbjct: 28  VVLYSIGKDSSVLLHLALKAFYPAKPPFPFLHVDTTWKFREMIAFRDRMARELGFNLLVH 87

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFV---PGRNIIFLVFAATLAY 124
            +  G D  +     G   H+ + K +A++    N           R+         +  
Sbjct: 88  TNQDGVDQGIGPFTHGSNLHTHVMKTMALRQALENYRFDAALAGARRDEEKSRAKERMFS 147

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
                +      +                      L   +   +   ++
Sbjct: 148 IRNAQHGWDPKRQRPEMWKTYNTRVGAGETMRVFPLSNWTEFDIWQYIL 196


>gi|89100508|ref|ZP_01173369.1| Cell cycle protein MesJ [Bacillus sp. NRRL B-14911]
 gi|89084774|gb|EAR63914.1| Cell cycle protein MesJ [Bacillus sp. NRRL B-14911]
          Length = 462

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 17/52 (32%), Gaps = 4/52 (7%)

Query: 9  PSALLLFSGGQDSSTCLSWALDR----FDRVETLSFDYGQRNKVELECRLCV 56
             L+  SGG DS   L     +          + FD+  R +   +    V
Sbjct: 20 KKVLVGVSGGPDSLALLHLLWKKRKVWGAEPAAIHFDHMFRGEESYQEARFV 71


>gi|75760871|ref|ZP_00740884.1| LPS biosynthesis protein WbpG [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228905551|ref|ZP_04069500.1| LPS biosynthesis protein WbpG [Bacillus thuringiensis IBL 4222]
 gi|74491633|gb|EAO54836.1| LPS biosynthesis protein WbpG [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228854087|gb|EEM98796.1| LPS biosynthesis protein WbpG [Bacillus thuringiensis IBL 4222]
          Length = 323

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 1/67 (1%)

Query: 12  LLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           +L +SGG+DS+  L    +++   V  ++FD G   +        V   +         S
Sbjct: 54  VLAYSGGKDSTYTLYLLKEKYKLNVLAVTFDNGFLAEETYSNIRNVCASLNADSLIIAPS 113

Query: 71  LGEDHIL 77
             + + +
Sbjct: 114 TKKINAI 120


>gi|66800145|ref|XP_628998.1| hypothetical protein DDB_G0293548 [Dictyostelium discoideum AX4]
 gi|60462365|gb|EAL60586.1| hypothetical protein DDB_G0293548 [Dictyostelium discoideum AX4]
          Length = 665

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 26/208 (12%), Positives = 56/208 (26%), Gaps = 29/208 (13%)

Query: 1   MNDIIKKAPSALLL-FSGGQDSSTCLSWAL-----------DRFDRVETLSFDYGQRNKV 48
           MN +     S L++  SGG DS   L               +R  ++  ++ D+   N V
Sbjct: 162 MNTLTISNKSTLVIGVSGGSDSMVLLYLLKNWCIGENSANVNRKLKITVITIDHKMTNPV 221

Query: 49  ELE--CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT 106
             +      +  +++           +  ++ +         SL       +   ++ N 
Sbjct: 222 AEDIPYISKIINQLINNDNNSNFIKIKHKVVEIDEQRCKQQVSLRNQRIEILMSESVGNG 281

Query: 107 FVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV 166
                    L        +                   +   D + A+     +     V
Sbjct: 282 NNLIFYGTNLNDQMETFIQR---------------INKNSGLDGLAAMTKITKISNTHSV 326

Query: 167 TVHTPLMWLKKYETWKLAQDIGGQDLVN 194
            +  PL+   K E      +   Q   +
Sbjct: 327 LLVRPLLDFSKLEILDFCSERSIQYFND 354


>gi|315274600|ref|ZP_07869470.1| bifunctional protein TilS/hprT [Listeria marthii FSL S4-120]
 gi|313615770|gb|EFR89028.1| bifunctional protein TilS/hprT [Listeria marthii FSL S4-120]
          Length = 648

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 56/197 (28%), Gaps = 24/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRV-ETLSFDYGQRNKVELECRLCVRKKIV 61
           D+I+     L+  SGG DS   L +  +      E +S                    + 
Sbjct: 16  DLIRSDDKLLVAVSGGPDSLALLHFLWESKLIPKEAIS--------------------VA 55

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
            L    +++  ++  L        +    T+ V +K Q   L         I+   F   
Sbjct: 56  HLNHHLRENAAKEQQLVEIFCKQHNLPFYTEEVDVKKQAQVLQKGIEETARIVRYDFFEK 115

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV---TVHTPLMWLKKY 178
           +     I  +V+     D       R     +      +  +  V       P + + K 
Sbjct: 116 IMAEQNINKLVLAHHADDQIETILMRLVRGSSSIGWSGIQPKREVKGGYAIRPFLPITKA 175

Query: 179 ETWKLAQDIGGQDLVNL 195
           E  + A        ++ 
Sbjct: 176 EIIEYAHKHSLAYEIDE 192


>gi|262306079|gb|ACY45632.1| gln amidotransferase [Milnesium tardigradum]
          Length = 203

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 5/64 (7%)

Query: 3  DIIKKA---PSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVR 57
          D+IKK       LLL SGG DS+ C        +  +V  L  D G   K E +    + 
Sbjct: 35 DMIKKTVGDQKVLLLASGGVDSTVCAKLLQKTLKSXQVTILHIDNGFMRKGESKNVTQLL 94

Query: 58 KKIV 61
            + 
Sbjct: 95 MGLG 98


>gi|149911763|ref|ZP_01900368.1| Argininosuccinate synthase (Citrulline--aspartate ligase)
          [Moritella sp. PE36]
 gi|149805151|gb|EDM65172.1| Argininosuccinate synthase (Citrulline--aspartate ligase)
          [Moritella sp. PE36]
          Length = 404

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF--DYGQRNKVELECRLCV 56
           + +     ++ +SGG D+S  L W  + +D  E ++F  D GQ  +         
Sbjct: 2  KMTQTVKKIVVAYSGGLDTSVILPWLQENYDNCEIIAFVADVGQGAEELEGIEAKA 57


>gi|314969849|gb|EFT13947.1| GMP synthase protein [Propionibacterium acnes HL037PA1]
          Length = 517

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 51/183 (27%), Gaps = 16/183 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +       D++  +  D+G   + E      V+   V       
Sbjct: 219 RVICGLSGGVDSAVAAALVQRAVGDQLTCVFVDHGLLRQGE---AEQVKNDFVAATGADL 275

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E     L  L  +  +       +  ++       V  R           A +   
Sbjct: 276 VVADESQRF-LDALSGV--TDPETKRKIIGREFIRTFEDVAKRLN---------ADQPID 323

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +   ++  PL  L K E   +  ++G
Sbjct: 324 FLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPDDLQFSLVEPLRTLFKDEVRAVGLELG 383

Query: 189 GQD 191
             +
Sbjct: 384 LPE 386


>gi|313808738|gb|EFS47192.1| GMP synthase protein [Propionibacterium acnes HL087PA2]
          Length = 517

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 51/183 (27%), Gaps = 16/183 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +       D++  +  D+G   + E      V+   V       
Sbjct: 219 RVICGLSGGVDSAVAAALVQRAVGDQLTCVFVDHGLLRQGE---AEQVKNDFVAATGADL 275

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E      A+ G    +       +  ++       V  R           A +   
Sbjct: 276 VVADESQRFLDALAG---VTDPETKRKIIGREFIRTFEDVAKRLN---------ADQPID 323

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +   ++  PL  L K E   +  ++G
Sbjct: 324 FLVQGTLYPDVVESGGGGGAANIKSHHNVGGLPDDLQFSLVEPLRTLFKDEVRAVGLELG 383

Query: 189 GQD 191
             +
Sbjct: 384 LPE 386


>gi|313763136|gb|EFS34500.1| GMP synthase protein [Propionibacterium acnes HL013PA1]
 gi|313816475|gb|EFS54189.1| GMP synthase protein [Propionibacterium acnes HL059PA1]
 gi|313828309|gb|EFS66023.1| GMP synthase protein [Propionibacterium acnes HL063PA2]
 gi|314914434|gb|EFS78265.1| GMP synthase protein [Propionibacterium acnes HL005PA4]
 gi|314917757|gb|EFS81588.1| GMP synthase protein [Propionibacterium acnes HL050PA1]
 gi|314919516|gb|EFS83347.1| GMP synthase protein [Propionibacterium acnes HL050PA3]
 gi|314930107|gb|EFS93938.1| GMP synthase protein [Propionibacterium acnes HL067PA1]
 gi|314957092|gb|EFT01197.1| GMP synthase protein [Propionibacterium acnes HL027PA1]
 gi|314957682|gb|EFT01785.1| GMP synthase protein [Propionibacterium acnes HL002PA1]
 gi|315097885|gb|EFT69861.1| GMP synthase protein [Propionibacterium acnes HL059PA2]
 gi|315100650|gb|EFT72626.1| GMP synthase protein [Propionibacterium acnes HL046PA1]
 gi|315109277|gb|EFT81253.1| GMP synthase protein [Propionibacterium acnes HL030PA2]
 gi|327451308|gb|EGE97962.1| GMP synthase protein [Propionibacterium acnes HL087PA3]
 gi|327451786|gb|EGE98440.1| GMP synthase protein [Propionibacterium acnes HL083PA2]
 gi|328752271|gb|EGF65887.1| GMP synthase protein [Propionibacterium acnes HL087PA1]
 gi|328755345|gb|EGF68961.1| GMP synthase protein [Propionibacterium acnes HL025PA2]
          Length = 517

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 51/183 (27%), Gaps = 16/183 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +       D++  +  D+G   + E      V+   V       
Sbjct: 219 RVICGLSGGVDSAVAAALVQRAVGDQLTCVFVDHGLLRQGE---AEQVKNDFVAATGADL 275

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E     L  L  +  +       +  ++       V  R           A +   
Sbjct: 276 VVADESQRF-LDALSGV--TDPETKRKIIGREFIRTFEDVAKRLN---------ADQPID 323

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +   ++  PL  L K E   +  ++G
Sbjct: 324 FLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPDDLQFSLVEPLRTLFKDEVRAVGLELG 383

Query: 189 GQD 191
             +
Sbjct: 384 LPE 386


>gi|314947948|ref|ZP_07851352.1| GMP synthase protein [Enterococcus faecium TX0082]
 gi|313645546|gb|EFS10126.1| GMP synthase protein [Enterococcus faecium TX0082]
          Length = 515

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 56/186 (30%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++ ++  D+G   K E      V + +       
Sbjct: 218 KKVLLGLSGGVDSSVVGVLLQKAIGDQLTSIFVDHGLLRKGE---AEQVMESLGGKFG-- 272

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      L I+   +       +                   +F   A  LA   G
Sbjct: 273 -----------LNIIKVNARDRFLDKLKGVSDPEQKRKIIGNEFVYVFDDEATKLAGEEG 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           ++ +  G   TD          TI++      L  +    +  PL  L K E  +L   +
Sbjct: 322 VSFLAQGTLYTDVIESGTETAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRELGTQL 381

Query: 188 GGQDLV 193
           G  D +
Sbjct: 382 GMPDSI 387


>gi|308270584|emb|CBX27196.1| Probable glutamine-dependent NAD(+) synthetase [uncultured
           Desulfobacterium sp.]
          Length = 558

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 23/192 (11%), Positives = 46/192 (23%), Gaps = 3/192 (1%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             +L  SGG DS+     A      + V T+       +K        + + I       
Sbjct: 300 KVVLGLSGGIDSAITAFIAAQAIGPENVLTVFMPSSYTSKENYGDTQKLAQNIGTKYEII 359

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR-NIIFLVFAATLAYRL 126
                 +  L L       +        ++ +        +  R N I L         +
Sbjct: 360 PIDSVFEGFLKLVSPSFKQNEPEVTEQNIQARIRGTILMALSNRENRILLSTGNKSELAV 419

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   +   +           +                    +       +         D
Sbjct: 420 GYCTLYGDMNGGLAVISDIPKTIVYEISHFINRSKETIPANIIKKAPSAELKPDQTDQDD 479

Query: 187 IGGQDLVNLILE 198
           +   DL++ IL+
Sbjct: 480 LPPYDLLDAILK 491


>gi|283953751|ref|ZP_06371282.1| hypothetical protein C414_000010118 [Campylobacter jejuni subsp.
          jejuni 414]
 gi|283794792|gb|EFC33530.1| hypothetical protein C414_000010118 [Campylobacter jejuni subsp.
          jejuni 414]
          Length = 327

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 25/54 (46%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           AL LFSGG DS   +     +  +V+ L+ + G  +  +    +  R  +V+ 
Sbjct: 2  KALALFSGGLDSMLAMKLITAQGIKVKALNINIGFGSTSDKSEIMKKRAAMVDA 55


>gi|258615235|ref|ZP_05713005.1| GMP synthase [Enterococcus faecium DO]
          Length = 463

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 56/186 (30%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++ ++  D+G   K E      V + +       
Sbjct: 166 KKVLLGLSGGVDSSVVGVLLQKAIGDQLTSIFVDHGLLRKGE---AEQVMESLGGKFG-- 220

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      L I+   +       +                   +F   A  LA   G
Sbjct: 221 -----------LNIIKVNARDRFLDKLKGVSDPEQKRKIIGNEFVYVFDDEATKLAGEEG 269

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           ++ +  G   TD          TI++      L  +    +  PL  L K E  +L   +
Sbjct: 270 VSFLAQGTLYTDVIESGTETAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRELGTQL 329

Query: 188 GGQDLV 193
           G  D +
Sbjct: 330 GMPDSI 335


>gi|251811289|ref|ZP_04825762.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Staphylococcus epidermidis BCM-HMP0060]
 gi|251805156|gb|EES57813.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Staphylococcus epidermidis BCM-HMP0060]
          Length = 515

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 56/187 (29%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS           +++  +  D+G   K E +    V ++  E    
Sbjct: 220 NRKVLCAMSGGVDSSVVAVLLHKAIGEQLTCIFVDHGLLRKGEGDM---VMEQFGE---- 272

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G D  +      +   S L      + +   + N FV   +              
Sbjct: 273 -----GFDMNIIRVNAQERFMSKLKGVSDPERKRKIIGNEFVYVFDDEAAKLTDVDFLAQ 327

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G     +    T  +        TI++      L  +    +  P+  L K E   L  +
Sbjct: 328 GTLYTDVIESGTKTA-------QTIKSHHNVGGLPEDMEFELIEPINTLFKDEVRALGIE 380

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 381 LGIPEHL 387


>gi|228983319|ref|ZP_04143533.1| tRNA(Ile)-lysidine synthase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229194454|ref|ZP_04321258.1| tRNA(Ile)-lysidine synthase [Bacillus cereus m1293]
 gi|228589044|gb|EEK47058.1| tRNA(Ile)-lysidine synthase [Bacillus cereus m1293]
 gi|228776433|gb|EEM24785.1| tRNA(Ile)-lysidine synthase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 480

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 52/197 (26%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSW-----ALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           D++K+  + ++  SGG DS   L +     A  +F+ V     D    +    +      
Sbjct: 21  DVLKERSTIVVGVSGGPDSLALLYYLLEKRAAKQFEIVVA-HVD----HMFRGDESHEDL 75

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           + + +L            I           ++       +             R  + L 
Sbjct: 76  QFVQDLCKGLGVICETIRINVSQYQQQYGMNAQVAARECRYAFLERIMKKYDAR-YVALG 134

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                     +  +V G     Y+G    R                    +  PL+ + K
Sbjct: 135 HHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNG--------------YLIRPLLGVTK 180

Query: 178 YETWKLAQDIGGQDLVN 194
            E       +     ++
Sbjct: 181 EEIVDYCNKLKIIPRID 197


>gi|256824629|ref|YP_003148589.1| GMP synthase (glutamine-hydrolyzing) [Kytococcus sedentarius DSM
           20547]
 gi|256688022|gb|ACV05824.1| GMP synthase (glutamine-hydrolyzing) [Kytococcus sedentarius DSM
           20547]
          Length = 527

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 56/187 (29%), Gaps = 9/187 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS   +       D++  +  D+G     E E          + +   
Sbjct: 219 DRVICGLSGGVDSSVAAALVQRAVGDQLTCVFVDHGLLRSGEREQVE------NDFVEAT 272

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              L          L  ++  +  +     I    + +     R+++             
Sbjct: 273 GVDLVTVDATD-QFLDALAGVTEPETKRKIIGREFIRSFEQAARDVVSGRAGEGTDDEHP 331

Query: 128 ITNIVIGVCETD-YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           +  +V G    D           TI++      L  +    +  PL  L K E   + ++
Sbjct: 332 VKWLVQGTLYPDVVESGGGAGTATIKSHHNVGGLPDDLQFGLVEPLRMLFKDEVRAIGRE 391

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 392 LGVPEAI 398


>gi|193214830|ref|YP_001996029.1| GMP synthase [Chloroherpeton thalassium ATCC 35110]
 gi|226738419|sp|B3QYF4|GUAA_CHLT3 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|193088307|gb|ACF13582.1| GMP synthase, large subunit [Chloroherpeton thalassium ATCC 35110]
          Length = 514

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 1/53 (1%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           +A+   SGG DSS           D++  +  D G   K E E      K++ 
Sbjct: 223 TAICAISGGVDSSVAAVLVSRALGDKLHCIFVDNGLLRKNEAEKVQEKLKQLG 275


>gi|160934769|ref|ZP_02082155.1| hypothetical protein CLOLEP_03644 [Clostridium leptum DSM 753]
 gi|156866222|gb|EDO59594.1| hypothetical protein CLOLEP_03644 [Clostridium leptum DSM 753]
          Length = 421

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 47/161 (29%), Gaps = 14/161 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +    +L +SGG D+S  + W  + +    V  ++ D GQ    EL       KK   
Sbjct: 16  MAEIKKVVLAYSGGLDTSIIIPWLKENYNNCEVIAVAADVGQ--GKELSGLEEKAKKTGA 73

Query: 63  ---LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
               +        ED I P    G +  +         +   +     +  R +      
Sbjct: 74  SKLYIEDLNQVFVEDFIFPTVKAGAVYEN-------KYLLGTSFARPIIAKRIVEIAKAE 126

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
              A   G T         + +         I A     NL
Sbjct: 127 GADAICHGCTGKGNDQVRFELAIKAFAPEMKIIAPWRIWNL 167


>gi|146319671|ref|YP_001199383.1| argininosuccinate synthase [Streptococcus suis 05ZYH33]
 gi|145690477|gb|ABP90983.1| argininosuccinate synthase (citrulline-asparate ligase)
          [Streptococcus suis 05ZYH33]
 gi|292559287|gb|ADE32288.1| argininosuccinate synthase [Streptococcus suis GZ1]
          Length = 407

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          M   + K    +L +SGG D+S  ++W       V  +  D G
Sbjct: 7  MRKFMTK-EKLILAYSGGLDTSVAIAWLKKD-YDVIAVCMDVG 47


>gi|83591695|ref|YP_425447.1| GMP synthase [Rhodospirillum rubrum ATCC 11170]
 gi|91206825|sp|Q2RXI5|GUAA_RHORT RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|83574609|gb|ABC21160.1| GMP synthase (glutamine-hydrolyzing) [Rhodospirillum rubrum ATCC
           11170]
          Length = 525

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 58/185 (31%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DSS   +   +   +++  +  D+G   + E E       ++V +   
Sbjct: 226 SGRVICGLSGGVDSSVVAALIHEAIGEQLVCVLVDHGMMRQGETE-------QVVRVFRD 278

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +            LG +      +     I    +       R +         A  L
Sbjct: 279 RFNITLVHRDASELFLGKLDGVVDPEAKRKIIGATFIDVFDEEARKV-------GGADFL 331

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+    +      TI++      L     + +  PL  L K E   L ++
Sbjct: 332 AQGTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMKMALVEPLRELFKDEVRDLGRE 389

Query: 187 IGGQD 191
           +G  D
Sbjct: 390 LGLPD 394


>gi|15837261|ref|NP_297949.1| cell cycle protein [Xylella fastidiosa 9a5c]
 gi|61217426|sp|Q9PFJ8|TILS_XYLFA RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
          Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
          Full=tRNA(Ile)-lysidine synthetase
 gi|9105537|gb|AAF83469.1|AE003910_5 cell cycle protein [Xylella fastidiosa 9a5c]
          Length = 437

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 18/51 (35%), Gaps = 4/51 (7%)

Query: 11 ALLLFSGGQDSSTCLSWAL----DRFDRVETLSFDYGQRNKVELECRLCVR 57
           L+ FSGG DS+  L         R   +E +   +G     +     C  
Sbjct: 17 VLVAFSGGLDSTVLLHCLASQPTQRIHGLEAIHIHHGLHEHADAWTAHCAA 67


>gi|27469265|ref|NP_765902.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Staphylococcus epidermidis ATCC 12228]
 gi|38372353|sp|Q8CMQ8|GUAA_STAES RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|27316815|gb|AAO05990.1|AE016752_23 GMP synthase [Staphylococcus epidermidis ATCC 12228]
          Length = 513

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 56/187 (29%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS           +++  +  D+G   K E +    V ++  E    
Sbjct: 218 NRKVLCAMSGGVDSSVVAVLLHKAIGEQLTCIFVDHGLLRKGEGDM---VMEQFGE---- 270

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G D  +      +   S L      + +   + N FV   +              
Sbjct: 271 -----GFDMNIIRVNAQERFMSKLKGVSDPERKRKIIGNEFVYVFDDEAAKLTDVDFLAQ 325

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G     +    T  +        TI++      L  +    +  P+  L K E   L  +
Sbjct: 326 GTLYTDVIESGTKTA-------QTIKSHHNVGGLPEDMEFELIEPINTLFKDEVRALGIE 378

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 379 LGIPEHL 385


>gi|69247087|ref|ZP_00604219.1| GMP synthase, C-terminal:GMP synthase, N-terminal [Enterococcus
           faecium DO]
 gi|257881344|ref|ZP_05660997.1| GMP synthase [Enterococcus faecium 1,231,502]
 gi|257890562|ref|ZP_05670215.1| GMP synthase [Enterococcus faecium 1,231,410]
 gi|260558263|ref|ZP_05830459.1| GMP synthase [Enterococcus faecium C68]
 gi|293562922|ref|ZP_06677389.1| GMP synthase [Enterococcus faecium E1162]
 gi|294623793|ref|ZP_06702621.1| GMP synthase [Enterococcus faecium U0317]
 gi|68194971|gb|EAN09438.1| GMP synthase, C-terminal:GMP synthase, N-terminal [Enterococcus
           faecium DO]
 gi|257817002|gb|EEV44330.1| GMP synthase [Enterococcus faecium 1,231,502]
 gi|257826922|gb|EEV53548.1| GMP synthase [Enterococcus faecium 1,231,410]
 gi|260075437|gb|EEW63743.1| GMP synthase [Enterococcus faecium C68]
 gi|291596747|gb|EFF27970.1| GMP synthase [Enterococcus faecium U0317]
 gi|291605048|gb|EFF34515.1| GMP synthase [Enterococcus faecium E1162]
          Length = 521

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 56/186 (30%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++ ++  D+G   K E      V + +       
Sbjct: 224 KKVLLGLSGGVDSSVVGVLLQKAIGDQLTSIFVDHGLLRKGE---AEQVMESLGGKFG-- 278

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      L I+   +       +                   +F   A  LA   G
Sbjct: 279 -----------LNIIKVNARDRFLDKLKGVSDPEQKRKIIGNEFVYVFDDEATKLAGEEG 327

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           ++ +  G   TD          TI++      L  +    +  PL  L K E  +L   +
Sbjct: 328 VSFLAQGTLYTDVIESGTETAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRELGTQL 387

Query: 188 GGQDLV 193
           G  D +
Sbjct: 388 GMPDSI 393


>gi|325578000|ref|ZP_08148194.1| sulfate adenylyltransferase subunit 2 [Haemophilus parainfluenzae
           ATCC 33392]
 gi|325160233|gb|EGC72361.1| sulfate adenylyltransferase subunit 2 [Haemophilus parainfluenzae
           ATCC 33392]
          Length = 307

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 47/182 (25%), Gaps = 18/182 (9%)

Query: 13  LLFSGGQDSSTCLSWALDR---FDRVE-----TLSFDYGQRNKVELECRLCVRKKIVELM 64
           LLFSGG+DS   L+ A       DR        +  D G      ++ R     K+    
Sbjct: 34  LLFSGGKDSVVLLALARKAFQLGDRPVHLPFPLVHIDTGHNYPEVIQFRDEQMAKLNA-- 91

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L   H+      G +     T +         L      G + +          
Sbjct: 92  -----RLVVGHVEDSIAKGTVVLRKETDSRNAAQAVTLLETIAENGFDALMGGARRDEEK 146

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                 I     E         R +        ++ G    V    P+    + + W+  
Sbjct: 147 ARAKERIFSFRDEFGQWDPKAQRPELWSLYNAKLHKGENMRV---FPISNWTELDIWQYI 203

Query: 185 QD 186
             
Sbjct: 204 AR 205


>gi|303245634|ref|ZP_07331917.1| Thiamine biosynthesis protein-like protein [Desulfovibrio
          fructosovorans JJ]
 gi|302492897|gb|EFL52762.1| Thiamine biosynthesis protein-like protein [Desulfovibrio
          fructosovorans JJ]
          Length = 353

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
          AL LFSGG DS   +   + +   V  L F
Sbjct: 6  ALALFSGGLDSILAVKTVMAQGLDVLCLHF 35


>gi|296140467|ref|YP_003647710.1| sulfate adenylyltransferase, small subunit [Tsukamurella
           paurometabola DSM 20162]
 gi|296028601|gb|ADG79371.1| sulfate adenylyltransferase, small subunit [Tsukamurella
           paurometabola DSM 20162]
          Length = 308

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 44/180 (24%), Gaps = 17/180 (9%)

Query: 12  LLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++LFSGG+DS+  L  A+  F         L  D G      L  R  + +K    +   
Sbjct: 39  VILFSGGKDSTVLLHLAVKAFWPAPLPFALLHVDTGHNLPEVLAFRDKMVEKYNLRLHVA 98

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                         L D         +   +Q   L +     R             R  
Sbjct: 99  S---------VEDYLADGRLEERADGIRNPLQTVPLLDAITENRFDAVFGGGRRDEERAR 149

Query: 128 ITN-IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I               R +           G    V    P+    + + W+    
Sbjct: 150 AKERIFSLRNAFGQWDPKKQRPELWNLYNGRHAPGEHVRV---FPISNFTELDIWRYIAR 206


>gi|288549932|ref|ZP_05968665.2| GMP synthase [Enterobacter cancerogenus ATCC 35316]
 gi|288317233|gb|EFC56171.1| GMP synthase [Enterobacter cancerogenus ATCC 35316]
          Length = 539

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 242 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAQQVLDMFGDHFGLN 298

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 299 IVHVEGEKRFLDALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 350

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 351 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLRELFKDEVRKIGLEL 405

Query: 188 GGQ 190
           G  
Sbjct: 406 GLP 408


>gi|167825759|ref|ZP_02457230.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia pseudomallei 9]
          Length = 352

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 40/182 (21%), Gaps = 10/182 (5%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS       ++   V  L     + +     C         + +     +    
Sbjct: 1   MSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQ-----DWIDVVSVADLIG 55

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
             +            +      +      PN  V     I        A  LG   I  G
Sbjct: 56  IDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLGAQTIATG 115

Query: 135 VCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                               T         L          PL  + K    ++A  IG 
Sbjct: 116 HYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTRVREIAAQIGL 175

Query: 190 QD 191
            +
Sbjct: 176 PN 177


>gi|187918538|ref|YP_001884101.1| tRNA-specific 2-thiouridylase MnmA [Borrelia hermsii DAH]
 gi|119861386|gb|AAX17181.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Borrelia hermsii DAH]
          Length = 357

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 65/220 (29%), Gaps = 9/220 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDR-VETLSFDYGQRNKVELECRLCVRKKIVEL 63
           ++    A+ L SGG DSS  L   + +  + ++         +++         + I  +
Sbjct: 1   MQIMKIAV-LLSGGVDSSVALYTMIQKGYKNIKCYYLKIWLEDELSYIGECPWEEDINYV 59

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                       I+ L    +     +T  +      N         + I F  F   + 
Sbjct: 60  EAVCTKFNVPYEIISLQD--EYYKRVVTYAIEELKIGNTPSPDIFCNQRIKFGAFFDKIN 117

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYET 180
               +          + + +   +    +  + +  L   S   +   H PL  L K E 
Sbjct: 118 EHYDLIVTGHYAKIENKNNHYILKQAKDKIKDQSYFLSHLSREQISKLHFPLGDLLKTEI 177

Query: 181 WKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNS 220
            ++A  I   +      +    C+LGK        Y    
Sbjct: 178 RQIAHKIDLPNKNRKDSQGI--CFLGKIKYDEFIKYHLGE 215


>gi|77164138|ref|YP_342663.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Nitrosococcus oceani ATCC 19707]
 gi|254435046|ref|ZP_05048553.1| GMP synthase, C-terminal domain protein [Nitrosococcus oceani
           AFC27]
 gi|91206812|sp|Q3JDG3|GUAA_NITOC RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|76882452|gb|ABA57133.1| GMP synthase (glutamine-hydrolyzing) [Nitrosococcus oceani ATCC
           19707]
 gi|207088157|gb|EDZ65429.1| GMP synthase, C-terminal domain protein [Nitrosococcus oceani
           AFC27]
          Length = 524

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 55/187 (29%), Gaps = 17/187 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           A + LL  SGG DSS   +       D++  +  D G   + E      V       +  
Sbjct: 226 ADTVLLGLSGGVDSSVAAALLHKAIGDQLICVFVDNGLLRQGE---ADQVMATFARHLGI 282

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +  +     A+ G I   +  K +     +                          
Sbjct: 283 KVIHISAETRFLEALAGVIDPEAKRKIIGRVFIEVFEEEAAKLPNAQWLAQGT------- 335

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                 I     + +G    +   I++      L  E ++ +  PL  L K E  +L  +
Sbjct: 336 ------IYPDVIESAGGKTGKAQVIKSHHNVGGLPEELNLKLLEPLRELFKDEVRQLGTE 389

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 390 LGLPFEL 396


>gi|109899424|ref|YP_662679.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Pseudoalteromonas atlantica T6c]
 gi|123170869|sp|Q15R63|GUAA_PSEA6 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|109701705|gb|ABG41625.1| GMP synthase (glutamine-hydrolyzing) [Pseudoalteromonas atlantica
           T6c]
          Length = 525

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 49/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS             +  +  D G     E +              +  D
Sbjct: 230 VILGLSGGVDSSVVAMLLHRAIGKNLTCVFVDNGLLRLNEGQ--------------QVMD 275

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+   L +  +              + +        V              A  L   
Sbjct: 276 MFGDHFGLNIIKIDAEERFLSALAGTDEPEAKRKIIGRVFVEVFDEESKKLKNAKWLAQG 335

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S         I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 336 TIYPDVIESAGSATGKAHV--IKSHHNVGGLPDDMAMGLVEPLRELFKDEVRKIGLELGL 393

Query: 190 Q 190
            
Sbjct: 394 P 394


>gi|332198875|gb|EGJ12957.1| tRNA(Ile)-lysidine synthetase [Streptococcus pneumoniae GA47368]
          Length = 412

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 47/173 (27%), Gaps = 11/173 (6%)

Query: 6   KKAPSALLLFSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKI 60
           KK   A+L  SGG DS        ++  +    +     ++ QR +    E  L      
Sbjct: 17  KKHAKAVLALSGGLDSMFLFKVLSTYQKELEIELILAHVNHKQRIESDWEEKELRKLAAE 76

Query: 61  VELMPKWKDSLGED-----HILPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            EL     +  GE               ++   +  T  V     D+ +    +      
Sbjct: 77  TELPIYISNFSGEFSEARARNFRYDFFQEVMKKTGATALVTAHHADDQVETILMRLIRGT 136

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
            L + + +  +  +  I I      +                  N    + + 
Sbjct: 137 RLRYLSGIKEKQVVGEIEIIRPFLHFQKKDFPSIFHFEDTSNQENHYFRNRIR 189


>gi|238756449|ref|ZP_04617757.1| WbuX (WbeC) [Yersinia ruckeri ATCC 29473]
 gi|238705338|gb|EEP97747.1| WbuX (WbeC) [Yersinia ruckeri ATCC 29473]
          Length = 364

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 42/170 (24%), Gaps = 9/170 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            ++  SGG DSS     A ++   R      D G      +     + + +   +     
Sbjct: 55  CIIGLSGGLDSSYAAYVAKEKMGLRPLLFHVDAGWNTDQAVGNIEKLIEGLGLELYTEVV 114

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII--------FLVFAAT 121
           +  E   L L+ L            A               +++I               
Sbjct: 115 NWEEMKDLQLSFLKAGIPDQDLVQDAAFFSALYKFAHEHNVKHVITGSNFSTECCREPEE 174

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
               LGI  ++       +             +   +       + VH P
Sbjct: 175 WGGYLGIDKLLFNDIHNQFGTRKLETFPLTDIMVYKLYYQKILGMKVHHP 224


>gi|219125079|ref|XP_002182816.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405610|gb|EEC45552.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 770

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 22/73 (30%), Gaps = 8/73 (10%)

Query: 2   NDIIKKAPSALLLFSGGQDSST---CLSWALD---RFDRVETLSFDYGQRNKVELECR-- 53
           N    K    ++  SGG DS      L+          ++  +  DY  R   + E    
Sbjct: 408 NSSNPKTRKIIISLSGGVDSMVIASALAHLRRSLGYNLQLTAVHIDYANRPDSKAEASYV 467

Query: 54  LCVRKKIVELMPK 66
               +++      
Sbjct: 468 ERYCQQLEIEYHV 480


>gi|239828037|ref|YP_002950661.1| argininosuccinate synthase [Geobacillus sp. WCH70]
 gi|259585361|sp|C5D679|ASSY_GEOSW RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|239808330|gb|ACS25395.1| argininosuccinate synthase [Geobacillus sp. WCH70]
          Length = 402

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 51/212 (24%), Gaps = 27/212 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            P  +L +SGG D+S  + W  +R   V     D G+              K ++ + + 
Sbjct: 3   NPKLVLAYSGGLDTSVAIKWLQERGYDVIACCLDLGEG-------------KDLDFVKEK 49

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +G      + +  + +       +                   +       +A   G
Sbjct: 50  ALKVGAIKSYVIDVKEEFADEYALIALQAHALYEGKYPLVSALSRPLIAKKLVEIAELEG 109

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +  G                     +   L     V          + E  + A+  
Sbjct: 110 AVAVAHGCTGKGNDQVRFE--------VSIKALNPNLEVIAPVREWSWSREEEIEYAKKH 161

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCN 219
           G    V+L    S           +     C 
Sbjct: 162 GIPIPVDLDSPFS------IDQNLWGRSNECG 187


>gi|168484297|ref|ZP_02709249.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase) [Streptococcus
           pneumoniae CDC1873-00]
 gi|172042410|gb|EDT50456.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase) [Streptococcus
           pneumoniae CDC1873-00]
          Length = 425

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 47/173 (27%), Gaps = 11/173 (6%)

Query: 6   KKAPSALLLFSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKI 60
           KK   A+L  SGG DS        ++  +    +     ++ QR +    E  L      
Sbjct: 17  KKHAKAVLALSGGLDSMFLFKVLSTYQKELEIELILAHVNHKQRIESDWEEKELRKLAAE 76

Query: 61  VELMPKWKDSLGED-----HILPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            EL     +  GE               ++   +  T  V     D+ +    +      
Sbjct: 77  TELPIYISNFSGEFSEARARNFRYDFFQEVMKKTGATALVTAHHADDQVETILMRLIRGT 136

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
            L + + +  +  +  I I      +                  N    + + 
Sbjct: 137 RLRYLSGIKEKQVVGEIEIIRPFLHFQKKDFPSIFHFEDTSNQENHYFRNRIR 189


>gi|50122130|ref|YP_051297.1| GMP synthase [Pectobacterium atrosepticum SCRI1043]
 gi|81644335|sp|Q6D288|GUAA_ERWCT RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|49612656|emb|CAG76106.1| GMP synthase [glutamine-hydrolyzing] [Pectobacterium atrosepticum
           SCRI1043]
          Length = 525

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 52/184 (28%), Gaps = 17/184 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             S +L  SGG DSS           DR+  +  D G    + L     V +   +    
Sbjct: 227 NDSVILGLSGGVDSSVTAMLLHRAIGDRLTCVFVDNG---LLRLNEADQVLEMFGDNFGL 283

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +  +      + G+    +  K +     +                      A   
Sbjct: 284 NIVHVAAEDRFLNELAGEDEPEAKRKIIGRVFVEVFDEEANKQ-------------AEVK 330

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +    I     + +     +   I++      L  E  + +  PL  L K E  K+  +
Sbjct: 331 WLAQGTIYPDVIESAASATGKAHVIKSHHNVGGLPKEMKLGLVEPLKELFKDEVRKIGLE 390

Query: 187 IGGQ 190
           +G  
Sbjct: 391 LGLP 394


>gi|332976173|gb|EGK13040.1| GMP synthase [Psychrobacter sp. 1501(2011)]
          Length = 532

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 56/189 (29%), Gaps = 12/189 (6%)

Query: 9   PSALLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +LL  SGG DSS   +       D++  +  D G    + L     V +   E M  
Sbjct: 228 DKQVLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDNG---LLRLHEGDQVMQVFAENMGV 284

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +  +     A+ G+    +  K +          + F      I           L
Sbjct: 285 KVVRVDAEDRFLTALAGESEPEAKRKII-----GKTFIDVFADAARDISQGSDGKPVEFL 339

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+  S         I++      L  +    +  PL  L K E  KL   
Sbjct: 340 AQGTIYPDVIESAKSHQGKAHV--IKSHHNVGGLPEDLQFELVEPLRDLFKDEVRKLGIA 397

Query: 187 IGGQDLVNL 195
           +G    +  
Sbjct: 398 LGLPHKMIY 406


>gi|332375202|gb|AEE62742.1| unknown [Dendroctonus ponderosae]
          Length = 405

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 49/153 (32%), Gaps = 12/153 (7%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE---LM 64
           A   +L +SGG D+S  L W +++   V     + GQ    + E       K+     ++
Sbjct: 3   ADKIVLAYSGGLDTSCILKWLINKGHPVVCYMANVGQ--TEDFEAAKAKALKLGASQVVI 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              ++   E+++ P    G +  S      A+           +    I  L     LA 
Sbjct: 61  EDLREEFVENYVWPAVSYGLVYESRYLLGTALARP-------CISVGLINCLKDHQALAL 113

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETA 157
             G T         + + Y       I A    
Sbjct: 114 SHGATGKGNDQVRFELACYTLLPDVQIIAPWRQ 146


>gi|304391249|ref|ZP_07373193.1| GMP synthase [Ahrensia sp. R2A130]
 gi|303296605|gb|EFL90961.1| GMP synthase [Ahrensia sp. R2A130]
          Length = 528

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 50/183 (27%), Gaps = 17/183 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS       +   D++  +  D+G      L       + +      + 
Sbjct: 232 KVICGLSGGVDSSVAALLIHEAIGDQLTCILVDHG------LMRMDEAAQVVAMFNEHYD 285

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             L       + I      S          +        +              A  L  
Sbjct: 286 IKLIHVDAADMFIDALEGESDPETKRKTIGK--------LFIDVFEEEARKIGGAEFLAQ 337

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+    +      TI++      L    ++ +  PL  L K E   L  ++G
Sbjct: 338 GTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMNMQLVEPLRELFKDEVRVLGHELG 395

Query: 189 GQD 191
             D
Sbjct: 396 LPD 398


>gi|300690578|ref|YP_003751573.1| argininosuccinate synthase (Citrulline--aspartate ligase)
          [Ralstonia solanacearum PSI07]
 gi|299077638|emb|CBJ50274.1| Argininosuccinate synthase (Citrulline--aspartate ligase)
          [Ralstonia solanacearum PSI07]
          Length = 445

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 23/57 (40%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W  ++       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALRWMKNKGALPYAYTANLGQPDEEDYDAIPRKALEYGAEKARLID 72


>gi|299065835|emb|CBJ37014.1| Argininosuccinate synthase (Citrulline--aspartate ligase)
          [Ralstonia solanacearum CMR15]
          Length = 445

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 23/57 (40%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W  ++       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALRWMKNKGALPYAYTANLGQPDEEDYDAIPRKALEYGAEKARLID 72


>gi|293372701|ref|ZP_06619083.1| tRNA(Ile)-lysidine synthetase [Bacteroides ovatus SD CMC 3f]
 gi|292632510|gb|EFF51106.1| tRNA(Ile)-lysidine synthetase [Bacteroides ovatus SD CMC 3f]
          Length = 426

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 53/191 (27%), Gaps = 23/191 (12%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +       L+  SGG DS   L          E    ++  R   E +      +++ E 
Sbjct: 15  LFSPDDKILIALSGGADSVALLYILHTAGYHCEAAHCNFHLR-GKESDRDELFVRQLCER 73

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           M        E H+  +        +    ++ M  ++          +     V A    
Sbjct: 74  M--------EIHLHTIDFNTTQYATEKHISIEMAARELRYQWFEKIRKKCQADVVAVAHH 125

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
               I  I++ +                 A              +  PL+ + + E  + 
Sbjct: 126 QDDSIETILLNLIRGTGITGLLGIRPRNGA--------------IVRPLLCINREEIIRY 171

Query: 184 AQDIGGQDLVN 194
            Q+IG   + +
Sbjct: 172 LQNIGQDYVTD 182


>gi|291569805|dbj|BAI92077.1| phosphoadenosine phosphosulfate reductase family protein
           [Arthrospira platensis NIES-39]
          Length = 267

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 24/205 (11%), Positives = 57/205 (27%), Gaps = 10/205 (4%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  K    +L  SGG+DS+        +  ++E    D  +      E    ++ ++   
Sbjct: 1   MSNKPIRHILGLSGGKDSTALAILLHQQVPQMEYFFCDTHKELPETYEYLDRIKARLGIK 60

Query: 64  MPKWKDSLGEDHILPL------AILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           +       G DH L +      +         +      +   ++   +++  R      
Sbjct: 61  IHYLSAHRGFDHWLDIHGGLLPSPQKRWCTVMMKIKPLEEFVGDDETISYIGIRADENRD 120

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
              +    +                        I   +                  + +K
Sbjct: 121 GYISTKPNIRPVYPFKEKGLVKADILRLLEESGIGLPDYYRWRSRSGCF----FCFFQRK 176

Query: 178 YETWKLAQDIGGQDLVNLILEESHT 202
           YE  KLA++        +  E++H+
Sbjct: 177 YEWVKLAEEHPDLFAQAVDYEQNHS 201


>gi|229153842|ref|ZP_04281973.1| tRNA(Ile)-lysidine synthase [Bacillus cereus ATCC 4342]
 gi|228629646|gb|EEK86342.1| tRNA(Ile)-lysidine synthase [Bacillus cereus ATCC 4342]
          Length = 480

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 52/197 (26%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSW-----ALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           D++K+  + ++  SGG DS   L +     A  +F+ V     D    +    +      
Sbjct: 21  DVLKERSTIVVGVSGGPDSLALLYYLLEKRAAKQFEIVVA-HVD----HMFRGDESHEDL 75

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           + + +L            I           ++       +             R  + L 
Sbjct: 76  QFVQDLCKGLGVICETIRINVSQYQQQYGMNAQVAARECRYAFLERIMKKYDAR-YVALG 134

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                     +  +V G     Y+G    R                    +  PL+ + K
Sbjct: 135 HHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNG--------------YLIRPLLGVTK 180

Query: 178 YETWKLAQDIGGQDLVN 194
            E       +     ++
Sbjct: 181 EEIVDYCNKLKIIPRID 197


>gi|206972582|ref|ZP_03233525.1| tRNA(Ile)-lysidine synthetase [Bacillus cereus AH1134]
 gi|206732484|gb|EDZ49663.1| tRNA(Ile)-lysidine synthetase [Bacillus cereus AH1134]
          Length = 476

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 23/197 (11%), Positives = 52/197 (26%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D++K   + ++  SGG DS   L + L++                          K +V 
Sbjct: 17  DVLKNDSTIVVGVSGGPDSLALLYYLLEK--------------------RAEKQLKIVVA 56

Query: 63  LMPKW--KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +      D   ED      +  ++     T  + +                     F  
Sbjct: 57  HVDHMFRGDESHEDLRFVQGLCEELGIICETIRINVSQYQQQYGMNAQVAARECRYAFLE 116

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKK 177
            +  +     + +G    D       R       +    + ++       +  PL+ + K
Sbjct: 117 RIMKKYDARYVALGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGYLIRPLLGVTK 176

Query: 178 YETWKLAQDIGGQDLVN 194
            E       +     ++
Sbjct: 177 EEIVDYCNKLNLMPRID 193


>gi|163782973|ref|ZP_02177968.1| GMP synthase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881653|gb|EDP75162.1| GMP synthase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 510

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 23/181 (12%), Positives = 46/181 (25%), Gaps = 20/181 (11%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+           DR+     D+G     E E      + +         
Sbjct: 218 VIAALSGGVDSTVASVLVHRAIGDRLHCFFIDHGLLRLGEREEVEKNLRALG-------- 269

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 ++  + L              K  ++      + G   I +             
Sbjct: 270 --LPLKVVDASDLFLERL---------KGVEDPEEKRKIIGNTFIKVFEREARNVEGAEF 318

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I+       L  + H+ +  P   L K E  ++ + +G 
Sbjct: 319 LLQGTLYPDVVESAGIKGSAKIKTHHNVGGLPEKMHLKLLEPFRELFKDEVREIGKLLGI 378

Query: 190 Q 190
            
Sbjct: 379 P 379


>gi|156742308|ref|YP_001432437.1| asparagine synthetase B [Roseiflexus castenholzii DSM 13941]
 gi|156233636|gb|ABU58419.1| asparagine synthase (glutamine-hydrolyzing) [Roseiflexus
           castenholzii DSM 13941]
          Length = 498

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  SGG DSS     A    D+VE  +F  G     +LE    + + +     ++
Sbjct: 223 VSLSGGLDSSIIALLACAELDQVE--TFAVGMEGSADLEAARQMARYLGTHHHEY 275


>gi|71064590|ref|YP_263317.1| GMP synthase [Psychrobacter arcticus 273-4]
 gi|91206823|sp|Q4FVS5|GUAA_PSYA2 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|71037575|gb|AAZ17883.1| GMP synthase (glutamine-hydrolyzing) [Psychrobacter arcticus 273-4]
          Length = 536

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 58/188 (30%), Gaps = 12/188 (6%)

Query: 9   PSALLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +LL  SGG DSS   +       D++  +  D G    + L     V +   E M  
Sbjct: 232 DKQVLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDTG---LLRLHEGDQVMQIFAENMGV 288

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +  + +   A+ G+    +  K +          + F      I       +   L
Sbjct: 289 KVIRVDAEELFLTALAGESDPEAKRKII-----GKTFIDVFANSAREISEQSDGKVIEFL 343

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+  S         I++      L  +    +  PL  L K E  KL   
Sbjct: 344 AQGTIYPDVIESAKSHQGKAHV--IKSHHNVGGLPDDLAFELVEPLRDLFKDEVRKLGIT 401

Query: 187 IGGQDLVN 194
           +G    + 
Sbjct: 402 LGLPAKMI 409


>gi|17547272|ref|NP_520674.1| argininosuccinate synthase [Ralstonia solanacearum GMI1000]
 gi|24211507|sp|Q8XWC1|ASSY_RALSO RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|17429574|emb|CAD16260.1| probable argininosuccinate synthase (citrulline--aspartateligase)
          protein [Ralstonia solanacearum GMI1000]
          Length = 445

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 23/57 (40%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W  ++       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALRWMKNKGALPYAYTANLGQPDEEDYDAIPRKALEYGAEKARLID 72


>gi|121998460|ref|YP_001003247.1| GMP synthase [Halorhodospira halophila SL1]
 gi|121589865|gb|ABM62445.1| GMP synthase (glutamine-hydrolyzing) [Halorhodospira halophila SL1]
          Length = 529

 Score = 43.8 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 53/181 (29%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D G   + E      V       M     
Sbjct: 234 VVLGLSGGVDSSVTAALLHRAIGDQLTCVFVDNGLLRQGE---ADQVMATFARHMGV--- 287

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                  +      D   ++L+     + +   + N FV   +              G  
Sbjct: 288 ------RVIHIDAEDRFLTALSGVEDPEEKRRIIGNLFVEIFDEEAGKLQGVDFLAQGTI 341

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
              +     +  G        I++      L     + +  PL  L K E  ++  ++G 
Sbjct: 342 YPDVVESAGNAGGKSHV----IKSHHNVGGLPETMKLKLVEPLRELFKDEVRRVGLELGL 397

Query: 190 Q 190
            
Sbjct: 398 P 398


>gi|322801315|gb|EFZ22002.1| hypothetical protein SINV_15099 [Solenopsis invicta]
          Length = 585

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 21/59 (35%), Gaps = 4/59 (6%)

Query: 13  LLFSGGQDSSTCLSWALDRFDR---VETL-SFDYGQRNKVELECRLCVRKKIVELMPKW 67
            L SGG DSS   +  + +         + SF  G  +  ++     V K I     + 
Sbjct: 280 CLLSGGLDSSLVAALLMKQSKEHNLPYKIQSFAIGMGDSPDIVAARQVAKYIGTEHHEI 338


>gi|307179503|gb|EFN67817.1| Thioredoxin domain-containing protein 4 [Camponotus floridanus]
          Length = 759

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 34/109 (31%), Gaps = 9/109 (8%)

Query: 16  SGGQDSSTCLSWALDRFDRVETLSFDYG--------QRNKVELECRLCVRKKIVELMPKW 67
           SGG DS+       ++   V  +                + + E    +  K+   + + 
Sbjct: 10  SGGVDSAVTALLLKNKGFNVTGVFMKNWDIRDETGNCTVEKDYEDARWICDKLKIPLIQL 69

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
            D + E      + L +   +  T N  +    N   N F    ++  L
Sbjct: 70  -DFVKEYWNEVFSDLLEKYQTGYTPNPDILCNKNIKFNKFFDVAHVHLL 117


>gi|302388969|ref|YP_003824790.1| PP-loop domain protein [Thermosediminibacter oceani DSM 16646]
 gi|302199597|gb|ADL07167.1| PP-loop domain protein [Thermosediminibacter oceani DSM 16646]
          Length = 278

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 22/67 (32%), Gaps = 6/67 (8%)

Query: 5  IKKAPSALLLFSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
          IK     ++ FSGG DS+     CL         V  ++         ELE    + +K 
Sbjct: 14 IKNLGRVVVAFSGGVDSTFLLKVCLDVLGKE--NVLAVTARSSTYPARELEEARKLAEKF 71

Query: 61 VELMPKW 67
                 
Sbjct: 72 GANHEII 78


>gi|291280006|ref|YP_003496841.1| argininosuccinate synthase [Deferribacter desulfuricans SSM1]
 gi|290754708|dbj|BAI81085.1| argininosuccinate synthase [Deferribacter desulfuricans SSM1]
          Length = 403

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 17/38 (44%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR 45
              +L +SGG D+S  L W   +   V     D GQR
Sbjct: 3  REKVVLAYSGGLDTSVILKWLDLQGYDVVAYVADLGQR 40


>gi|262039585|ref|ZP_06012880.1| GMP synthase (glutamine-hydrolyzing) [Leptotrichia goodfellowii
           F0264]
 gi|261746394|gb|EEY33938.1| GMP synthase (glutamine-hydrolyzing) [Leptotrichia goodfellowii
           F0264]
          Length = 514

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 51/188 (27%), Gaps = 15/188 (7%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS       +    ++  +  D G   K E        KK++E   +
Sbjct: 214 NEHVLLALSGGVDSSVAAVLINNAIGKQLTCMFVDTGLLRKDEG-------KKVLEYYKE 266

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D            L  +      +     I +  +       R               
Sbjct: 267 HFDLNIVFVDAKDRFLNKLKGVDEPEAKRKIIGNEFIQVFNEEIRK-------LKGKEGA 319

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                     +   S        TI++      L  +    +  PL  L K E  K+  +
Sbjct: 320 KFLAQGTIYPDVIESQSIKGPSHTIKSHHNVGGLPEDLQFELLEPLKELFKDEVRKVGHE 379

Query: 187 IGGQDLVN 194
           +G  D + 
Sbjct: 380 LGLPDTII 387


>gi|221068264|ref|ZP_03544369.1| Argininosuccinate synthase [Comamonas testosteroni KF-1]
 gi|264677535|ref|YP_003277441.1| argininosuccinate synthase [Comamonas testosteroni CNB-2]
 gi|299529142|ref|ZP_07042590.1| argininosuccinate synthase [Comamonas testosteroni S44]
 gi|220713287|gb|EED68655.1| Argininosuccinate synthase [Comamonas testosteroni KF-1]
 gi|262208047|gb|ACY32145.1| argininosuccinate synthase [Comamonas testosteroni CNB-2]
 gi|298722898|gb|EFI63807.1| argininosuccinate synthase [Comamonas testosteroni S44]
          Length = 445

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 23/57 (40%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W  ++       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALRWMKNKGALPYAYTANLGQPDEADYDEIPRKAMEYGAEKARLID 72


>gi|121595064|ref|YP_986960.1| argininosuccinate synthase [Acidovorax sp. JS42]
 gi|222111407|ref|YP_002553671.1| argininosuccinate synthase [Acidovorax ebreus TPSY]
 gi|166219942|sp|A1W9F9|ASSY_ACISJ RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|254807519|sp|B9MBJ2|ASSY_DIAST RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|120607144|gb|ABM42884.1| argininosuccinate synthase [Acidovorax sp. JS42]
 gi|221730851|gb|ACM33671.1| argininosuccinate synthase [Acidovorax ebreus TPSY]
          Length = 448

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 23/57 (40%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W  ++       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALRWMKNKGALPYAYTANLGQPDEADYDEIPRKAMEYGAEKARLID 72


>gi|329119430|ref|ZP_08248115.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria bacilliformis ATCC BAA-1200]
 gi|327464363|gb|EGF10663.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Neisseria bacilliformis ATCC BAA-1200]
          Length = 365

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 16/136 (11%), Positives = 33/136 (24%), Gaps = 5/136 (3%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +     + ++  SGG DSS   +    +   V  +     + +  +  C +       + 
Sbjct: 1   MTDTQHNIVVGLSGGVDSSVTAALLKQQGHSVRGVFMQNWEDDDNDEYCSIKQ-----DS 55

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                 +      + +          +      +      PN  V     I        A
Sbjct: 56  FDAIAVADIIGIDIDIVNFAAQYKDKVFAYFLKEYSAGRTPNPDVLCNAEIKFKCFLDYA 115

Query: 124 YRLGITNIVIGVCETD 139
              G   I  G     
Sbjct: 116 LEQGADVIATGHYARK 131


>gi|268318799|ref|YP_003292455.1| GMP synthase [Lactobacillus johnsonii FI9785]
 gi|262397174|emb|CAX66188.1| GMP synthase [Lactobacillus johnsonii FI9785]
          Length = 517

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 57/186 (30%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS   +       D++  +  D+G   K E +    V + + + +   
Sbjct: 223 KKVILGLSGGVDSSVTATLLHKAIGDQLTAIFVDHGMLRKDEGD---QVMQALNKDLGVN 279

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       L  L  ++     + +  K             +++ FL         + 
Sbjct: 280 IIRVNAQERF-LNRLKGVTDPEQKRKIIGKEFIEVFNEEAKKLKDVDFLAQGTLYTDVIE 338

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                                 TI++      L  + H  +  PL  L K E  +L + +
Sbjct: 339 ---------------SGTNTAQTIKSHHNVGGLPEDMHFELIEPLRKLFKDEVRELGEKL 383

Query: 188 GGQDLV 193
           G    +
Sbjct: 384 GIPHDL 389


>gi|229824541|ref|ZP_04450610.1| hypothetical protein GCWU000282_01885 [Catonella morbi ATCC 51271]
 gi|229785912|gb|EEP22026.1| hypothetical protein GCWU000282_01885 [Catonella morbi ATCC 51271]
          Length = 487

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 55/187 (29%), Gaps = 23/187 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWA-----LDRFDRVETL--SFDYGQRNKVELECRLCVRKK 59
           +A + +L  SGG DS   L        L +++ ++ +   F++  R + + E  + +++ 
Sbjct: 20  EAKTVVLAVSGGVDSMVMLRLMNELNQLRQYNHLQLVVAHFNHKLRPESDNE-AVAIKEI 78

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           + E    +                         NV  + +D          R     V  
Sbjct: 79  VAEYGCIY--------------FATEWGEPAATNVEAQARDARYQFFAEVIRTTEADVLM 124

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
                       ++ +                + + +    G     T+  P + + K E
Sbjct: 125 TAHHLNDVAETFLMRMTRGTSIRGLQGIRGCYQRLMSD-PSGHTVMPTIIRPFIGVTKAE 183

Query: 180 TWKLAQD 186
               A+ 
Sbjct: 184 LEAYAEK 190


>gi|227888915|ref|ZP_04006720.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Lactobacillus johnsonii ATCC 33200]
 gi|227850503|gb|EEJ60589.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Lactobacillus johnsonii ATCC 33200]
          Length = 517

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 57/186 (30%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS   +       D++  +  D+G   K E +    V + + + +   
Sbjct: 223 KKVILGLSGGVDSSVTATLLHKAIGDQLTAIFVDHGMLRKDEGD---QVMQALNKDLGVN 279

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       L  L  ++     + +  K             +++ FL         + 
Sbjct: 280 IIRVNAQERF-LNRLKGVTDPEQKRKIIGKEFIEVFNEEAKKLKDVDFLAQGTLYTDVIE 338

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                                 TI++      L  + H  +  PL  L K E  +L + +
Sbjct: 339 ---------------SGTNTAQTIKSHHNVGGLPEDMHFELIEPLRKLFKDEVRELGEKL 383

Query: 188 GGQDLV 193
           G    +
Sbjct: 384 GIPHDL 389


>gi|93004847|ref|YP_579284.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Psychrobacter cryohalolentis K5]
 gi|92392525|gb|ABE73800.1| GMP synthase (glutamine-hydrolyzing) [Psychrobacter cryohalolentis
           K5]
          Length = 531

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 58/188 (30%), Gaps = 12/188 (6%)

Query: 9   PSALLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +LL  SGG DSS   +       D++  +  D G    + L     V +   E M  
Sbjct: 227 DKQVLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDTG---LLRLHEGDQVMQIFAENMGV 283

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +  + +   A+ G+    +  K +          + F      +       +   L
Sbjct: 284 KVIRVDAEELFLTALAGESDPEAKRKII-----GKTFIDVFANSAREVSEQSDGKVIEFL 338

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+  S         I++      L  +    +  PL  L K E  KL   
Sbjct: 339 AQGTIYPDVIESAKSHQGKAHV--IKSHHNVGGLPDDLAFELVEPLRDLFKDEVRKLGIT 396

Query: 187 IGGQDLVN 194
           +G    + 
Sbjct: 397 LGLPAKMI 404


>gi|313633851|gb|EFS00574.1| GMP synthase (glutamine-hydrolyzing) [Listeria seeligeri FSL
           N1-067]
          Length = 518

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 53/186 (28%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V + +       
Sbjct: 224 KKVLLALSGGVDSSVVGVLIHKAIGDQLTCIFVDHGLLRKGE---ADQVMETLQGEFNMN 280

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G         +   K +       +V       L     LA    
Sbjct: 281 IIKVDAKKRFMDKLAG-------VSDPEQKRKIIGNEFIYVFDDEANKLDGVEFLAQGTL 333

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            T+I+                 TI++      L  +    +  PL  L K E   L  ++
Sbjct: 334 YTDIIESGTA---------TAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGTEL 384

Query: 188 GGQDLV 193
           G  D +
Sbjct: 385 GMPDAI 390


>gi|315281840|ref|ZP_07870382.1| GMP synthase (glutamine-hydrolyzing) [Listeria marthii FSL S4-120]
 gi|313614515|gb|EFR88117.1| GMP synthase (glutamine-hydrolyzing) [Listeria marthii FSL S4-120]
          Length = 394

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 53/186 (28%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V + +       
Sbjct: 224 KKVLLALSGGVDSSVVGVLIHKAIGDQLTCIFVDHGLLRKGE---ADQVMETLQGEFNMN 280

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G         +   K +       +V       L     LA    
Sbjct: 281 IIKVDAKKRFMDKLAG-------VSDPEQKRKIIGNEFIYVFDDEANKLDGVEFLAQGTL 333

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            T+I+                 TI++      L  +    +  PL  L K E   L  ++
Sbjct: 334 YTDIIESGTA---------TAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGTEL 384

Query: 188 GGQDLV 193
           G  D +
Sbjct: 385 GMPDAI 390


>gi|304396663|ref|ZP_07378544.1| tRNA(Ile)-lysidine synthetase [Pantoea sp. aB]
 gi|304356172|gb|EFM20538.1| tRNA(Ile)-lysidine synthetase [Pantoea sp. aB]
          Length = 439

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 6/60 (10%)

Query: 3  DIIKKAPSA-LLLFSGGQDSSTCLSWAL---DRFDRVE--TLSFDYGQRNKVELECRLCV 56
          D + +  +A ++ FSGG DS+  L        +        L   +G     +     C+
Sbjct: 7  DAMLQPDAALVVAFSGGLDSTVLLHQLRGWQQQHPESHLRALHVHHGLSPNADCWAAHCL 66


>gi|301063916|ref|ZP_07204391.1| putative argininosuccinate synthase [delta proteobacterium NaphS2]
 gi|300441991|gb|EFK06281.1| putative argininosuccinate synthase [delta proteobacterium NaphS2]
          Length = 223

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 26/203 (12%), Positives = 61/203 (30%), Gaps = 11/203 (5%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +K    +L +SGG D+S  L W  + +   V   + D GQ  ++E            E
Sbjct: 1   MAEKIKKIVLAYSGGLDTSVILKWLKETYQCPVVAYAADLGQGEELEGIREKAFATGADE 60

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           ++      + +   +        +  +        +   +L    +  R +         
Sbjct: 61  VV------IDDLTDVFAKDFVWPALRANAIYETTYLLGTSLARPLISKRQVEVAHETGAN 114

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI----NLGMESHVTVHTPLMWLKKY 178
           A   G T         + +         I A            + ++       + + K 
Sbjct: 115 AVSHGATGKGNDQVRFELAYMALDPSLQIIAPWRTWDFKGREDLMAYARSKGIPVPVTKE 174

Query: 179 ETWKLAQDIGGQDLVNLILEESH 201
           + +   +++        ILE++ 
Sbjct: 175 KPYSSDRNLLHISFEGGILEDTW 197


>gi|284801428|ref|YP_003413293.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Listeria monocytogenes 08-5578]
 gi|284994570|ref|YP_003416338.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Listeria monocytogenes 08-5923]
 gi|284056990|gb|ADB67931.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Listeria monocytogenes 08-5578]
 gi|284060037|gb|ADB70976.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Listeria monocytogenes 08-5923]
          Length = 518

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 53/186 (28%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V + +       
Sbjct: 224 KKVLLALSGGVDSSVVGVLIHKAIGDQLTCIFVDHGLLRKGE---ADQVMETLQGEFNMN 280

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G         +   K +       +V       L     LA    
Sbjct: 281 IIKVDAKKRFMDKLAG-------VSDPEQKRKIIGNEFIYVFDDEANKLDGVEFLAQGTL 333

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            T+I+                 TI++      L  +    +  PL  L K E   L  ++
Sbjct: 334 YTDIIESGTA---------TAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGTEL 384

Query: 188 GGQDLV 193
           G  D +
Sbjct: 385 GMPDAI 390


>gi|259502394|ref|ZP_05745296.1| GMP synthase [Lactobacillus antri DSM 16041]
 gi|259169656|gb|EEW54151.1| GMP synthase [Lactobacillus antri DSM 16041]
          Length = 517

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS           D++  +  D+G   K E +      + +  L    
Sbjct: 223 KKVILGLSGGVDSSVTAVLIHKAIGDQLTCIFVDHGLLRKNEAD------QVMKALNKDL 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             ++ +       +      +   +   +  ++                 F         
Sbjct: 277 GVNIVKVDAADRFLGKLAGVTDPEQKRKIIGKEFIEV-------------FNEEAKKIPD 323

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +  G   TD          TI++      L  +    +  PL  L K ET +L + +
Sbjct: 324 ADFLAQGTLYTDVIESGTDTAQTIKSHHNVGGLPKKLGFKLIEPLRKLFKDETRELGEKL 383

Query: 188 GGQDLV 193
           G    +
Sbjct: 384 GIPHEL 389


>gi|262203058|ref|YP_003274266.1| sulfate adenylyltransferase small subunit [Gordonia bronchialis DSM
           43247]
 gi|262086405|gb|ACY22373.1| sulfate adenylyltransferase, small subunit [Gordonia bronchialis
           DSM 43247]
          Length = 316

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 50/191 (26%), Gaps = 19/191 (9%)

Query: 12  LLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++LFSGG+DS+  L  AL  F         L  D G      LE R  V  +    +   
Sbjct: 47  VILFSGGKDSTVLLHVALKAFWPAPLPFALLHVDTGHNLPEVLEFRDQVVARHNLRLHVA 106

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           K             L D   +     V   +Q   L +     R             R  
Sbjct: 107 K---------VEDYLADGRLTERPDGVRNPLQTIPLLDAITENRFDAVFGGGRRDEERSR 157

Query: 128 ITN-IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I               R +           G    V    PL    + + W+    
Sbjct: 158 AKERIFSLRNAFGQWDPKRQRPELWNLYNGRHAPGEHVRV---FPLSNWTELDIWRYIAR 214

Query: 187 IGGQDLVNLIL 197
              Q L+  I 
Sbjct: 215 --EQVLLPSIY 223


>gi|224502590|ref|ZP_03670897.1| GMP synthase [Listeria monocytogenes FSL R2-561]
          Length = 514

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 53/186 (28%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V + +       
Sbjct: 220 KKVLLALSGGVDSSVVGVLIHKAIGDQLTCIFVDHGLLRKGE---ADQVMETLQGEFNMN 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G         +   K +       +V       L     LA    
Sbjct: 277 IIKVDAKKRFMDKLAG-------VSDPEQKRKIIGNEFIYVFDDEANKLDGVEFLAQGTL 329

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            T+I+                 TI++      L  +    +  PL  L K E   L  ++
Sbjct: 330 YTDIIESGTA---------TAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGTEL 380

Query: 188 GGQDLV 193
           G  D +
Sbjct: 381 GMPDAI 386


>gi|254467291|ref|ZP_05080702.1| GMP synthase (glutamine-hydrolyzing) [Rhodobacterales bacterium
           Y4I]
 gi|206688199|gb|EDZ48681.1| GMP synthase (glutamine-hydrolyzing) [Rhodobacterales bacterium
           Y4I]
          Length = 520

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 50/183 (27%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS       +   D++  +  D+G   K E      V K   +     
Sbjct: 223 KKVICGLSGGVDSSVAAVLIHEAIGDQLTCVFVDHGLLRKNE---AEEVVKMFRDNYNIQ 279

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                E          ++    L      + +   +   F+                  G
Sbjct: 280 LIHADE---------SELFLGELEGQSDPETKRKIIGKLFIDVFQKHADTIDGAEFLAQG 330

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                +    +   G       TI++      L  +  + +  PL  L K E   L  ++
Sbjct: 331 TLYPDVIESVSFSGGP----SVTIKSHHNVGGLPEKMGLKLVEPLRELFKDEVRALGHEL 386

Query: 188 GGQ 190
           G  
Sbjct: 387 GLP 389


>gi|167588827|ref|ZP_02381215.1| argininosuccinate synthase [Burkholderia ubonensis Bu]
          Length = 444

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 24/67 (35%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + +       + FSGG D+S  L W   +       + + GQ ++ + +       +   
Sbjct: 6  ESLPTGQKVGIAFSGGLDTSAALHWMKLKGAVPYAYTANLGQPDEDDYDSIPKRAIEYGA 65

Query: 63 LMPKWKD 69
             +  D
Sbjct: 66 AGARLID 72


>gi|254830134|ref|ZP_05234789.1| GMP synthase [Listeria monocytogenes 10403S]
          Length = 514

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 53/186 (28%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V + +       
Sbjct: 220 KKVLLALSGGVDSSVVGVLIHKAIGDQLTCIFVDHGLLRKGE---ADQVMETLQGEFNMN 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G         +   K +       +V       L     LA    
Sbjct: 277 IIKVDAKKRFMDKLAG-------VSDPEQKRKIIGNEFIYVFDDEANKLDGVEFLAQGTL 329

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            T+I+                 TI++      L  +    +  PL  L K E   L  ++
Sbjct: 330 YTDIIESGTA---------TAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGTEL 380

Query: 188 GGQDLV 193
           G  D +
Sbjct: 381 GMPDAI 386


>gi|120404283|ref|YP_954112.1| argininosuccinate synthase [Mycobacterium vanbaalenii PYR-1]
 gi|166220997|sp|A1TAA6|ASSY_MYCVP RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|119957101|gb|ABM14106.1| argininosuccinate synthase [Mycobacterium vanbaalenii PYR-1]
          Length = 400

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           +   +L +SGG D S        +    V  ++ D GQ  +     R     
Sbjct: 1  MSERVILAYSGGLDTSVAISWIGKETGSEVVAVAIDLGQGGEDMEVVRQRALD 53


>gi|16803136|ref|NP_464621.1| GMP synthase [Listeria monocytogenes EGD-e]
 gi|24211754|sp|Q8Y822|GUAA_LISMO RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|16410498|emb|CAC99174.1| guaA [Listeria monocytogenes EGD-e]
          Length = 518

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 53/186 (28%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V + +       
Sbjct: 224 KKVLLALSGGVDSSVVGVLIHKAIGDQLTCIFVDHGLLRKGE---ADQVMETLQGEFNMN 280

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G         +   K +       +V       L     LA    
Sbjct: 281 IIKVDAKKRFMDKLAG-------VSDPEQKRKIIGNEFIYVFDDEANKLDGVEFLAQGTL 333

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            T+I+                 TI++      L  +    +  PL  L K E   L  ++
Sbjct: 334 YTDIIESGTA---------TAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGTEL 384

Query: 188 GGQDLV 193
           G  D +
Sbjct: 385 GMPDAI 390


>gi|319943796|ref|ZP_08018077.1| GMP synthase [Lautropia mirabilis ATCC 51599]
 gi|319743029|gb|EFV95435.1| GMP synthase [Lautropia mirabilis ATCC 51599]
          Length = 538

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 57/185 (30%), Gaps = 19/185 (10%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D+G               ++ E       
Sbjct: 229 VILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHG-------------LLRLNEGDMVMDM 275

Query: 70  SLGEDH-ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             G+ H  +       +   +L      + +   +   FV           A+ A   G 
Sbjct: 276 FAGKLHAKVVRVDASQLFLDALAGVSDPEQKRKIIGRLFVDVFKAEAEKLKASGAGHKGA 335

Query: 129 TNIVI---GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           T +          +  G    +   I++      L  +  + +  PL  L K E  +L  
Sbjct: 336 TFLAQGTIYPDVIESGGAKSKKAVVIKSHHNVGGLPEQLGLKLLEPLRDLFKDEVRELGV 395

Query: 186 DIGGQ 190
            +G  
Sbjct: 396 ALGLP 400


>gi|300865980|ref|ZP_07110716.1| Asparagine synthase family [Oscillatoria sp. PCC 6506]
 gi|300336046|emb|CBN55874.1| Asparagine synthase family [Oscillatoria sp. PCC 6506]
          Length = 557

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 19/54 (35%), Gaps = 1/54 (1%)

Query: 15  FSGGQDSSTCLSWALDRFDR-VETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            SGG DSS   + A    DR V T S  +G     E+E    V           
Sbjct: 230 LSGGIDSSCVTAIAARLHDRPVHTFSIHFGAEYPSEIEFANIVAAHCGTEHHIL 283


>gi|283456168|ref|YP_003360732.1| argininosuccinate synthase [Bifidobacterium dentium Bd1]
 gi|283102802|gb|ADB09908.1| argG Argininosuccinate synthase [Bifidobacterium dentium Bd1]
          Length = 412

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCV 56
          +      +L +SGG D+S  +S+  +R    V  +S D GQ  +     +   
Sbjct: 1  MSDQNRLVLAYSGGLDTSVAISYLKERTGKDVVAVSLDVGQGGESLETIKQRA 53


>gi|257469696|ref|ZP_05633788.1| PP-loop domain protein [Fusobacterium ulcerans ATCC 49185]
 gi|317063928|ref|ZP_07928413.1| asparagine synthase [Fusobacterium ulcerans ATCC 49185]
 gi|313689604|gb|EFS26439.1| asparagine synthase [Fusobacterium ulcerans ATCC 49185]
          Length = 277

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 27/74 (36%), Gaps = 6/74 (8%)

Query: 1  MNDIIKK--APSALLLFSGGQDSSTCL----SWALDRFDRVETLSFDYGQRNKVELECRL 54
          +  +++K    + ++ FSGG DSS  L      A+    +V  ++         E+E   
Sbjct: 11 LQKLMEKYTQENVVVAFSGGVDSSLLLKTACINAVKNGTKVFAVTMHTTLHTMNEIESSK 70

Query: 55 CVRKKIVELMPKWK 68
              ++        
Sbjct: 71 ETAGEVGAEHLIIS 84


>gi|212550361|ref|YP_002308678.1| tRNA(Ile)-lysidine synthase [Candidatus Azobacteroides
          pseudotrichonymphae genomovar. CFP2]
 gi|212548599|dbj|BAG83267.1| tRNA(Ile)-lysidine synthase [Candidatus Azobacteroides
          pseudotrichonymphae genomovar. CFP2]
          Length = 447

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 14/36 (38%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR 45
            ++  SGG DSS  L        + +    ++  R
Sbjct: 25 KIVVGVSGGVDSSVLLYILHHLGYKCQAAHCNFHLR 60


>gi|15803031|ref|NP_289061.1| GMP synthase [Escherichia coli O157:H7 EDL933]
 gi|12516899|gb|AAG57618.1|AE005480_5 GMP synthetase (glutamine-hydrolyzing) [Escherichia coli O157:H7
           str. EDL933]
          Length = 525

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 24/183 (13%), Positives = 51/183 (27%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVLDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +    L+ L   +     + +  ++         +   B+ +L           
Sbjct: 285 IVHVPAEDRF-LSALAGENDPEAKRKIIGRVFVEVFDEEALKLEBVKWLAQGTIY----- 338

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                      + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 339 -------PDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|86132087|ref|ZP_01050683.1| Argininosuccinate synthase [Dokdonia donghaensis MED134]
 gi|85817421|gb|EAQ38601.1| Argininosuccinate synthase [Dokdonia donghaensis MED134]
          Length = 393

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 18/55 (32%), Gaps = 1/55 (1%)

Query: 9  PSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
             +L +SGG D S     +  +    V  +S + G     E+         +  
Sbjct: 2  KKLILAYSGGLDTSYCVKYFTAEMGYEVHAVSVNTGGFTDQEIANNKKKALALGA 56


>gi|124268219|ref|YP_001022223.1| argininosuccinate synthase [Methylibium petroleiphilum PM1]
 gi|166220989|sp|A2SK99|ASSY_METPP RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|124260994|gb|ABM95988.1| argininosuccinate synthase [Methylibium petroleiphilum PM1]
          Length = 446

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       +   GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALHWMKLKGALPYAYTAHLGQPDEPDYDEIPRKAMQYGAEKARLID 72


>gi|306826197|ref|ZP_07459532.1| tRNA(Ile)-lysidine synthetase [Streptococcus sp. oral taxon 071
           str. 73H25AP]
 gi|304431673|gb|EFM34654.1| tRNA(Ile)-lysidine synthetase [Streptococcus sp. oral taxon 071
           str. 73H25AP]
          Length = 425

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 24/182 (13%), Positives = 42/182 (23%), Gaps = 13/182 (7%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRF-----DRVETLSFDYGQRNKV-ELECRLCV 56
           +  KK    +L  SGG DS   L   L  +       +     ++ QR++    E  L  
Sbjct: 14  EYFKKHSKVVLALSGGLDSMF-LFQLLSTYQKELEIELILAHVNHKQRSESDWEENELRK 72

Query: 57  RKKIVELMPKWKDSLGED-----HILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPG 110
                EL        G+                I   +     V     D+ +    +  
Sbjct: 73  LADAAELPIYITSFSGDFSEARAREFRYDFFRKIMKEAGATALVTAHHADDQVETILMRL 132

Query: 111 RNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT 170
                L     +     +  I I      +                  N    + +    
Sbjct: 133 IRGSRLRHLTGIKESQVVDGIEIIRPLFHFHKKDFPPILHFEDQTNQENTYFRNRIRNRY 192

Query: 171 PL 172
             
Sbjct: 193 LP 194


>gi|285018357|ref|YP_003376068.1| gmp synthase (glutamine amidotransferase) protein [Xanthomonas
           albilineans GPE PC73]
 gi|283473575|emb|CBA16078.1| probable gmp synthase (glutamine amidotransferase) protein
           [Xanthomonas albilineans]
          Length = 521

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 49/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D G     E +              +   
Sbjct: 226 VILGLSGGVDSSVVAALLHKAIGDKLTCVFVDTGLLRWQEGD--------------QVMA 271

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E   + +  +                +        +              A  L   
Sbjct: 272 MFAEHMGVKVIRVNAAERYFNALAGISDPEAKRKVIGNLFVDIFDEESNKLHNARWLAQG 331

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S     +   I++      L     + +  PL  L K E  +L  ++G 
Sbjct: 332 TIYPDVIESAGS--KTGKAHVIKSHHNVGGLPEHMKLGLVEPLRELFKDEVRRLGVELGL 389

Query: 190 Q 190
            
Sbjct: 390 P 390


>gi|255075653|ref|XP_002501501.1| asparagine synthase [Micromonas sp. RCC299]
 gi|226516765|gb|ACO62759.1| asparagine synthase [Micromonas sp. RCC299]
          Length = 803

 Score = 43.8 bits (101), Expect = 0.023,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 31/78 (39%), Gaps = 3/78 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDY---GQRNKVELECRLCVRKKIVELMPKWKD 69
           +LFSGG DS+  L+ A+     V   +  +   G +  +++        K+       + 
Sbjct: 289 VLFSGGVDSTALLAVAVRIGIPVVAATAGWTGEGTKEPLDISPARAAALKLGARFELEEV 348

Query: 70  SLGEDHILPLAILGDISH 87
           S   + I  L  L  + H
Sbjct: 349 SQISEVIDALRALHRVVH 366


>gi|203284580|ref|YP_002222320.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Borrelia duttonii Ly]
 gi|229486337|sp|B5RMM8|MNMA_BORDL RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|201084023|gb|ACH93614.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Borrelia duttonii Ly]
          Length = 354

 Score = 43.8 bits (101), Expect = 0.024,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 66/215 (30%), Gaps = 8/215 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDR-VETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              +L SGG DSS  L   + +  + ++         +++        ++ I  +    K
Sbjct: 2   KIAILLSGGVDSSVALYTMIQKGYKNIKCYYLKIWLEDELSYIGECPWKEDITYVDSVCK 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                  I+ L    +  +  +T  +      N         + I F  F   +  +  +
Sbjct: 62  KFNVPYEIINLQE--EYYNRVVTYAIEELKMGNTPSPDIFCNQRIKFGAFFEKINEKYDL 119

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLAQ 185
                     + +     +    +  + +  L   S   +   H PL  L K E  ++A 
Sbjct: 120 IVTGHYAKIENKNNSYTLKQAKDKIKDQSYFLSHLSKKQISKLHFPLGDLLKSEIRQIAH 179

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNS 220
           +I   +      +    C+LGK        Y    
Sbjct: 180 EIDLPNKNRKDSQGI--CFLGKIKYNEFIKYHLGE 212


>gi|156741716|ref|YP_001431845.1| tRNA-specific 2-thiouridylase MnmA [Roseiflexus castenholzii DSM
          13941]
 gi|156233044|gb|ABU57827.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Roseiflexus castenholzii DSM 13941]
          Length = 383

 Score = 43.8 bits (101), Expect = 0.024,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 31/76 (40%)

Query: 2  NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
          +++I      ++  SGG DSS   +   +    V  ++    + +   L   LC  +++ 
Sbjct: 7  SEVIIPMAKIMIAMSGGVDSSLAAALLHEAGHDVTGVTLHLWEGDDDRLAESLCCSQEMT 66

Query: 62 ELMPKWKDSLGEDHIL 77
          E   +    LG  + +
Sbjct: 67 ESARRVCAQLGIPYYV 82


>gi|221066857|ref|ZP_03542962.1| GMP synthase, large subunit [Comamonas testosteroni KF-1]
 gi|220711880|gb|EED67248.1| GMP synthase, large subunit [Comamonas testosteroni KF-1]
          Length = 538

 Score = 43.8 bits (101), Expect = 0.024,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 57/185 (30%), Gaps = 19/185 (10%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D+G               ++ E       
Sbjct: 229 VILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHG-------------LLRLNEGDMVMDM 275

Query: 70  SLGEDH-ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             G+ H  +      D+    L      + +   +   FV           A  A   G 
Sbjct: 276 FEGKLHAKVVRVDASDLFLGELAGVSEPEQKRKIIGRLFVDVFKAEAEKLKAANAGSKGA 335

Query: 129 TNIVI---GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           T +          +  G    +  TI++      L  +  + +  PL  L K E  +L  
Sbjct: 336 TFLAQGTIYPDVIESGGAKSKKAVTIKSHHNVGGLPEQLGLKLLEPLRDLFKDEVRELGV 395

Query: 186 DIGGQ 190
            +G  
Sbjct: 396 ALGLP 400


>gi|90577202|ref|ZP_01233013.1| galactosyl transferase [Vibrio angustum S14]
 gi|90440288|gb|EAS65468.1| galactosyl transferase [Vibrio angustum S14]
          Length = 562

 Score = 43.8 bits (101), Expect = 0.024,   Method: Composition-based stats.
 Identities = 19/170 (11%), Positives = 51/170 (30%), Gaps = 5/170 (2%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           A+   SGG DS   ++  L R  ++E ++F Y QR++ E+       +     +     S
Sbjct: 238 AISTLSGGLDSRVIVTELLKRGIKLECMNFSY-QRSQDEVY-AEVFAQCHDFPLHIVNVS 295

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDN--NLPNTFVPGRNIIFLVFAATLAYRLGI 128
             ++  +   +      +     + ++      +     V    +               
Sbjct: 296 DTQEQSIEQRLGHYWRATQYPFYLQVERPRLVWSGNGGSVCIGMVFCDDHILAACASGDP 355

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             +     +  ++  P         ++  +   +   +      + L K 
Sbjct: 356 FAVAKAYLKHQHAYIPKRMVKQGAKLQRQLEQNIVECLC-QYSHLPLDKA 404


>gi|33519704|ref|NP_878536.1| thiamine biosynthesis protein ThiI [Candidatus Blochmannia
           floridanus]
 gi|33504049|emb|CAD83310.1| thiamine biosynthesis protein ThiI [Candidatus Blochmannia
           floridanus]
          Length = 492

 Score = 43.8 bits (101), Expect = 0.024,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 50/188 (26%), Gaps = 22/188 (11%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L L SGG DS       + R  +V    F+                  I ++    +  
Sbjct: 180 CLSLVSGGFDSVVSSYMLIRRGCKVHYCFFNL-----------------IGDINHTIEVY 222

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                 +   +    S+S   K + +               N + +V    +        
Sbjct: 223 -----KIVYYLWKKFSYSHNVKFICVNFSHVVKELFVKIQPNYVGIVLKRLMIQAASSIA 277

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
               +                      IN  +  +  +  PL+   K    +L++ IG +
Sbjct: 278 TCRNIQVLSTGEVLGQVSSQTLDNLILINNMVSFNCMILRPLIAYDKESIIELSRKIGTE 337

Query: 191 DLVNLILE 198
            L   I E
Sbjct: 338 ALSRTIPE 345


>gi|298253916|ref|ZP_06977503.1| argininosuccinate synthase [Gardnerella vaginalis 5-1]
 gi|297532059|gb|EFH71034.1| argininosuccinate synthase [Gardnerella vaginalis 5-1]
          Length = 404

 Score = 43.8 bits (101), Expect = 0.024,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQ 44
          +      +L +SGG D+S  + +  ++    V  +S + GQ
Sbjct: 1  MTNKKRIVLAYSGGLDTSVAIPYLKEQTGQDVVAVSLNVGQ 41


>gi|297243608|ref|ZP_06927539.1| argininosuccinate synthase [Gardnerella vaginalis AMD]
 gi|296888359|gb|EFH27100.1| argininosuccinate synthase [Gardnerella vaginalis AMD]
          Length = 404

 Score = 43.8 bits (101), Expect = 0.024,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQ 44
          +      +L +SGG D+S  + +  ++    V  +S + GQ
Sbjct: 1  MTNKKRIVLAYSGGLDTSVAIPYLKEQTGQDVVAVSLNVGQ 41


>gi|283783148|ref|YP_003373902.1| argininosuccinate synthase [Gardnerella vaginalis 409-05]
 gi|283442007|gb|ADB14473.1| argininosuccinate synthase [Gardnerella vaginalis 409-05]
          Length = 404

 Score = 43.8 bits (101), Expect = 0.024,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQ 44
          +      +L +SGG D+S  + +  ++    V  +S + GQ
Sbjct: 1  MTNKKRIVLAYSGGLDTSVAIPYLKEQTGQDVVAVSLNVGQ 41


>gi|227537569|ref|ZP_03967618.1| NAD(+) synthase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227242571|gb|EEI92586.1| NAD(+) synthase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 546

 Score = 43.8 bits (101), Expect = 0.024,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 37/113 (32%), Gaps = 16/113 (14%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR--FDRVETLSF--DYGQRNKVELECRLCVRKKIVELM 64
             A L  SGG DS+   + A +    + V  +     Y   +             + + +
Sbjct: 290 KKATLGLSGGLDSAVVAALACEAIGAENVLAILMPSVYSSNHS------------LKDAL 337

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
              K++    HI+P+  +      +L+K       D    N     R  + + 
Sbjct: 338 DLVKNAGCTHHIIPIKDVAQAFEGTLSKAFEGLQPDTTEENIQARTRGTLLMA 390


>gi|212538631|ref|XP_002149471.1| GMP synthase [Penicillium marneffei ATCC 18224]
 gi|210069213|gb|EEA23304.1| GMP synthase [Penicillium marneffei ATCC 18224]
          Length = 542

 Score = 43.8 bits (101), Expect = 0.024,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 55/188 (29%), Gaps = 6/188 (3%)

Query: 9   PSALLL--FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           P AL+L   SGG DS+       +   DR + +  D G     E      V+K + E + 
Sbjct: 230 PRALVLGACSGGVDSTVGAKLMREAIGDRFKAILIDNGFMRLNE---CEEVKKTLEEHLG 286

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                +    +    + G        K +     D          +       +  + + 
Sbjct: 287 INLTVVNAGELFMSRLAGVSDPEKKRKIIGSTFIDLFEQEAIRIEKEAENTSNSGKVEWF 346

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           L  T     +    + G                 +     + +  PL  L K E   + +
Sbjct: 347 LQGTLYPDVIESLSFRGPSATIKTHHNVGGLPERMMNGQGLRLIEPLRLLFKDEVRAIGR 406

Query: 186 DIGGQDLV 193
            +G  + +
Sbjct: 407 QLGIHESL 414


>gi|150024624|ref|YP_001295450.1| asparagine synthetase B [Flavobacterium psychrophilum JIP02/86]
 gi|149771165|emb|CAL42632.1| Probable asparagine synthetase [glutamine-hydrolyzing]
           [Flavobacterium psychrophilum JIP02/86]
          Length = 538

 Score = 43.8 bits (101), Expect = 0.024,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 37/170 (21%), Gaps = 6/170 (3%)

Query: 13  LLFSGGQD----SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           +L SGG D    SS       ++   +   SF  G               + +       
Sbjct: 224 VLLSGGLDSSLTSSIASRLLKEKGKTLH--SFSIGLDENAPDAKAARKVAEFLGTKHHEV 281

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E  I  L  L     +    +V        L          + L          G 
Sbjct: 282 HFTIEQGIEILDKLIWHLETYDVTSVRASTPMYFLSKAITDMGIKVVLSGEGADEIFGGY 341

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
                     D+      R   +   +            +   + +L K 
Sbjct: 342 LYFRNAPTTEDFQKETIERVQKLFTADLLRADKSTMAHGLEARVPFLDKA 391


>gi|88802260|ref|ZP_01117787.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Polaribacter irgensii 23-P]
 gi|88781118|gb|EAR12296.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Polaribacter irgensii 23-P]
          Length = 511

 Score = 43.8 bits (101), Expect = 0.024,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 19/55 (34%), Gaps = 1/55 (1%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           +   +L  SGG DS+             +  +  + G   K E E  L   + + 
Sbjct: 214 SDKVVLGLSGGVDSTVAAVLLHKAIGKNLYCIFVNNGLLRKNEFESVLAQYEGMG 268


>gi|293571201|ref|ZP_06682236.1| GMP synthase [Enterococcus faecium E980]
 gi|291608712|gb|EFF37999.1| GMP synthase [Enterococcus faecium E980]
          Length = 521

 Score = 43.4 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 56/186 (30%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++ ++  D+G   K E      V + +       
Sbjct: 224 KKVLLGLSGGVDSSVVGVLLQKAIGDQLTSIFVDHGLLRKGE---AEQVMESLGGKFG-- 278

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      L I+   +       +                   +F   A  LA   G
Sbjct: 279 -----------LNIIKVDARDRFLDKLKGVSDPEQKRKIIGNEFVYVFDDEATKLAGEEG 327

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           ++ +  G   TD          TI++      L  +    +  PL  L K E  +L   +
Sbjct: 328 VSFLAQGTLYTDVIESGTETAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRELGTQL 387

Query: 188 GGQDLV 193
           G  D +
Sbjct: 388 GMPDSI 393


>gi|257885611|ref|ZP_05665264.1| GMP synthase [Enterococcus faecium 1,231,501]
 gi|257821467|gb|EEV48597.1| GMP synthase [Enterococcus faecium 1,231,501]
          Length = 521

 Score = 43.4 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 56/186 (30%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++ ++  D+G   K E      V + +       
Sbjct: 224 KKVLLGLSGGVDSSVVGVLLQKAIGDQLTSIFVDHGLLRKGE---AEQVMESLGGKFG-- 278

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      L I+   +       +                   +F   A  LA   G
Sbjct: 279 -----------LNIIKVDARDRFLDKLKGVSDPEQKRKIIGNEFVYVFDDEATKLAGEEG 327

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           ++ +  G   TD          TI++      L  +    +  PL  L K E  +L   +
Sbjct: 328 VSFLAQGTLYTDVIESGTETAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRELGTQL 387

Query: 188 GGQDLV 193
           G  D +
Sbjct: 388 GMPDSI 393


>gi|257878703|ref|ZP_05658356.1| GMP synthase [Enterococcus faecium 1,230,933]
 gi|257888045|ref|ZP_05667698.1| GMP synthase [Enterococcus faecium 1,141,733]
 gi|257893150|ref|ZP_05672803.1| GMP synthase [Enterococcus faecium 1,231,408]
 gi|257896336|ref|ZP_05675989.1| GMP synthase [Enterococcus faecium Com12]
 gi|257899311|ref|ZP_05678964.1| GMP synthase [Enterococcus faecium Com15]
 gi|261206969|ref|ZP_05921658.1| GMP synthase [Enterococcus faecium TC 6]
 gi|289565394|ref|ZP_06445844.1| GMP synthase [Enterococcus faecium D344SRF]
 gi|293379422|ref|ZP_06625566.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Enterococcus faecium PC4.1]
 gi|293556575|ref|ZP_06675143.1| GMP synthase [Enterococcus faecium E1039]
 gi|294615416|ref|ZP_06695289.1| GMP synthase [Enterococcus faecium E1636]
 gi|294618343|ref|ZP_06697924.1| GMP synthase [Enterococcus faecium E1679]
 gi|257812931|gb|EEV41689.1| GMP synthase [Enterococcus faecium 1,230,933]
 gi|257824099|gb|EEV51031.1| GMP synthase [Enterococcus faecium 1,141,733]
 gi|257829529|gb|EEV56136.1| GMP synthase [Enterococcus faecium 1,231,408]
 gi|257832901|gb|EEV59322.1| GMP synthase [Enterococcus faecium Com12]
 gi|257837223|gb|EEV62297.1| GMP synthase [Enterococcus faecium Com15]
 gi|260078597|gb|EEW66299.1| GMP synthase [Enterococcus faecium TC 6]
 gi|289162884|gb|EFD10734.1| GMP synthase [Enterococcus faecium D344SRF]
 gi|291591790|gb|EFF23426.1| GMP synthase [Enterococcus faecium E1636]
 gi|291595437|gb|EFF26749.1| GMP synthase [Enterococcus faecium E1679]
 gi|291601251|gb|EFF31535.1| GMP synthase [Enterococcus faecium E1039]
 gi|292641945|gb|EFF60111.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Enterococcus faecium PC4.1]
          Length = 521

 Score = 43.4 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 56/186 (30%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++ ++  D+G   K E      V + +       
Sbjct: 224 KKVLLGLSGGVDSSVVGVLLQKAIGDQLTSIFVDHGLLRKGE---AEQVMESLGGKFG-- 278

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      L I+   +       +                   +F   A  LA   G
Sbjct: 279 -----------LNIIKVDARDRFLDKLKGVSDPEQKRKIIGNEFVYVFDDEATKLAGEEG 327

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           ++ +  G   TD          TI++      L  +    +  PL  L K E  +L   +
Sbjct: 328 VSFLAQGTLYTDVIESGTETAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRELGTQL 387

Query: 188 GGQDLV 193
           G  D +
Sbjct: 388 GMPDSI 393


>gi|256829264|ref|YP_003157992.1| PP-loop domain-containing protein [Desulfomicrobium baculatum DSM
           4028]
 gi|256578440|gb|ACU89576.1| PP-loop domain protein [Desulfomicrobium baculatum DSM 4028]
          Length = 312

 Score = 43.4 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 25/80 (31%), Gaps = 8/80 (10%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +       L+  SGG+DS        D    +E L  D G      +       ++   +
Sbjct: 43  MFTFDDRILIAISGGKDSLALAWQLKDLGYNIEGLHIDLGIPESSPI--ARSYAERFCAM 100

Query: 64  MPKWKDSLGEDHILPLAILG 83
                      H++  A LG
Sbjct: 101 GEI------PLHVIETAKLG 114


>gi|227550696|ref|ZP_03980745.1| GMP synthase (glutamine-hydrolyzing) [Enterococcus faecium TX1330]
 gi|314937585|ref|ZP_07844911.1| GMP synthase protein [Enterococcus faecium TX0133a04]
 gi|314942916|ref|ZP_07849729.1| GMP synthase protein [Enterococcus faecium TX0133C]
 gi|314950864|ref|ZP_07853933.1| GMP synthase protein [Enterococcus faecium TX0133A]
 gi|314991487|ref|ZP_07856964.1| GMP synthase protein [Enterococcus faecium TX0133B]
 gi|314994993|ref|ZP_07860113.1| GMP synthase protein [Enterococcus faecium TX0133a01]
 gi|227180157|gb|EEI61129.1| GMP synthase (glutamine-hydrolyzing) [Enterococcus faecium TX1330]
 gi|313590719|gb|EFR69564.1| GMP synthase protein [Enterococcus faecium TX0133a01]
 gi|313593967|gb|EFR72812.1| GMP synthase protein [Enterococcus faecium TX0133B]
 gi|313596873|gb|EFR75718.1| GMP synthase protein [Enterococcus faecium TX0133A]
 gi|313598388|gb|EFR77233.1| GMP synthase protein [Enterococcus faecium TX0133C]
 gi|313642962|gb|EFS07542.1| GMP synthase protein [Enterococcus faecium TX0133a04]
          Length = 515

 Score = 43.4 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 56/186 (30%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++ ++  D+G   K E      V + +       
Sbjct: 218 KKVLLGLSGGVDSSVVGVLLQKAIGDQLTSIFVDHGLLRKGE---AEQVMESLGGKFG-- 272

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      L I+   +       +                   +F   A  LA   G
Sbjct: 273 -----------LNIIKVDARDRFLDKLKGVSDPEQKRKIIGNEFVYVFDDEATKLAGEEG 321

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           ++ +  G   TD          TI++      L  +    +  PL  L K E  +L   +
Sbjct: 322 VSFLAQGTLYTDVIESGTETAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRELGTQL 381

Query: 188 GGQDLV 193
           G  D +
Sbjct: 382 GMPDSI 387


>gi|222824480|ref|YP_002576054.1| hypothetical protein Cla_1498 [Campylobacter lari RM2100]
 gi|222539701|gb|ACM64802.1| conserved hypothetical protein [Campylobacter lari RM2100]
          Length = 327

 Score = 43.4 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 2/52 (3%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           AL LFSGG DS   +     +   V+ L+ + G       +    + K+  
Sbjct: 2  KALALFSGGLDSMLAIKLITSQGIEVKALNINIGF--GGTSDKSEIIAKRAA 51


>gi|319427115|gb|ADV55189.1| GMP synthase, large subunit [Shewanella putrefaciens 200]
          Length = 525

 Score = 43.4 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 49/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS            ++  +  D G     E                +  +
Sbjct: 230 VILGLSGGVDSSVVAMLLHRAIGTKLTCVFVDNGLLRLNE--------------AAQVME 275

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+   L +  +   +            +        V              A  L   
Sbjct: 276 MFGDHFGLNIIHVDAENRFLDAMKGVADPEAKRKIIGRVFVEIFDEESKKCANAKWLAQG 335

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S         I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 336 TIYPDVIESAGSATGKAHV--IKSHHNVGGLPDDMELGLVEPLRELFKDEVRKIGLELGL 393

Query: 190 Q 190
            
Sbjct: 394 P 394


>gi|71279202|ref|YP_270891.1| GMP synthase [Colwellia psychrerythraea 34H]
 gi|91206801|sp|Q47WD1|GUAA_COLP3 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|71144942|gb|AAZ25415.1| GMP synthase [Colwellia psychrerythraea 34H]
          Length = 525

 Score = 43.4 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 50/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS           D++  +  D G     E +              +  D
Sbjct: 230 VILGLSGGVDSSVVAMLLHRAIGDKLTCVFVDNGLLRLDEGQ--------------QVMD 275

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+   L +  +              + +        V              A  L   
Sbjct: 276 MFGDHFGLNIIKIEAEDRFLNRLAGESEPEAKRKIIGNVFIDVFEEESNKLDNAKWLAQG 335

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S         I++      L     + +  PL  L K E  K+  ++G 
Sbjct: 336 TIYPDVIESAASATGKAHV--IKSHHNVGGLPDYMKLGLVEPLRELFKDEVRKIGLELGL 393

Query: 190 Q 190
            
Sbjct: 394 P 394


>gi|325262604|ref|ZP_08129341.1| argininosuccinate synthase [Clostridium sp. D5]
 gi|324032436|gb|EGB93714.1| argininosuccinate synthase [Clostridium sp. D5]
          Length = 406

 Score = 43.4 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 57/211 (27%), Gaps = 23/211 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L +SGG D++  + W  + F   V     D GQ  ++             + + +
Sbjct: 3   KEKVVLAYSGGLDTTAIIPWLKENFDYEVICCCIDCGQGEEL-------------DGLEE 49

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                G   +    I+ +     +   V       N           +       +A + 
Sbjct: 50  RSKLSGASKLYIENIIDEFCDEYIMPCVKAGAVYENKYLLGTSMARPVIAKRLVEIARKE 109

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G T I  G                  A +  I                  + +  +  Q 
Sbjct: 110 GATAICHGATGKGNDQIRFELGIKALAPDLKIIAPWRMTD----VWTMQSREDEIEYCQQ 165

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
            G    ++L  +  H+ Y   R+  +    G
Sbjct: 166 HG----IDLPFDAKHS-YSRDRNLWHISHEG 191


>gi|317486834|ref|ZP_07945649.1| arginosuccinate synthase [Bilophila wadsworthia 3_1_6]
 gi|316921910|gb|EFV43181.1| arginosuccinate synthase [Bilophila wadsworthia 3_1_6]
          Length = 402

 Score = 43.4 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 50/170 (29%), Gaps = 9/170 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKI-VELMPK 66
              +L +SGG D+S  L W   +    V T++ D GQ + +       +R       +  
Sbjct: 8   KKVVLAYSGGLDTSVILKWLQVNYGCEVITMTADVGQEDDLNGVDEKALRTGATKAYIED 67

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            ++   +D I P+   G +         ++           +  R +         A   
Sbjct: 68  LREEFAKDFIFPMLRSGALYEGRYLLGTSVARP-------LITKRLVEIARAEGADALAH 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
           G T         + S         + A     +L   + +        + 
Sbjct: 121 GATGKGNDQVRFELSAAALAPDLRVIAPWREWDLMSRTALNFFAEQHNIP 170


>gi|289424975|ref|ZP_06426754.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Propionibacterium acnes SK187]
 gi|289154674|gb|EFD03360.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Propionibacterium acnes SK187]
          Length = 524

 Score = 43.4 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 24/183 (13%), Positives = 50/183 (27%), Gaps = 16/183 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +       D++  +  D+G   + E      V+   V       
Sbjct: 226 RVICGLSGGVDSAVAAALVQRAVGDQLTCVFVDHGLLRQGE---AEQVKNDFVAATGADL 282

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E       + G    +       +  ++       V  R           A +   
Sbjct: 283 VVADESQRFLDVLAG---VTDPETKRKIIGREFIRTFEDVAKRLN---------ADQPID 330

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +   ++  PL  L K E   +  ++G
Sbjct: 331 FLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPDDLQFSLVEPLRTLFKDEVRAVGLELG 390

Query: 189 GQD 191
             +
Sbjct: 391 LPE 393


>gi|257456012|ref|ZP_05621221.1| GMP synthase [Enhydrobacter aerosaccus SK60]
 gi|257446601|gb|EEV21635.1| GMP synthase [Enhydrobacter aerosaccus SK60]
          Length = 527

 Score = 43.4 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 59/186 (31%), Gaps = 14/186 (7%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           +LL  SGG DSS   +       +++  +  D G     E +          ++M  + +
Sbjct: 228 VLLGLSGGVDSSVVAALLHKAIGEQLTCVFVDNGLLRLHEGD----------QVMRIFAE 277

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++G   I   A    ++  +   +   K +        V       L         L   
Sbjct: 278 NMGVKVIRVDAEERFLTALAGVSDPEAKRKIIGKTFIDVFADTARELSGEGRGIQFLAQG 337

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S         I++      L  +    +  PL  L K E  KL   +G 
Sbjct: 338 TIYPDVIESAKSHQGKAHV--IKSHHNVGGLPDDLQFKLVEPLRDLFKDEVRKLGVTLGL 395

Query: 190 QDLVNL 195
            + +  
Sbjct: 396 PEKMIY 401


>gi|294917174|ref|XP_002778414.1| hypothetical protein Pmar_PMAR018210 [Perkinsus marinus ATCC 50983]
 gi|239886807|gb|EER10209.1| hypothetical protein Pmar_PMAR018210 [Perkinsus marinus ATCC 50983]
          Length = 484

 Score = 43.4 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 51/188 (27%), Gaps = 11/188 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALD-RFDRVE-----TLSFDYGQRNKVELECRLCVRK 58
           + K+ + +L  SGG DSS+ L      R+ RV       L   Y    +   E R  +  
Sbjct: 89  MTKSRTVVLSLSGGVDSSSTLILLCALRYHRVADWKLRALYMGYSGNRENLDEARSEL-- 146

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
               L+    +            L        T +  +   +       +  R       
Sbjct: 147 ---NLVAWLCEQCNVQLFAFNIDLPRPHGLEGTTSGGVTRDEYETQTKSIRFRMYSLASG 203

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
                  LG     +     +         D         +        V  PL++ +K 
Sbjct: 204 DENCVVVLGHHQDDVDENRLEQLSRGHVMGDMDGMHRVRESPPGLDRCIVCRPLIYERKS 263

Query: 179 ETWKLAQD 186
              K+A +
Sbjct: 264 TFVKVATE 271


>gi|258654247|ref|YP_003203403.1| argininosuccinate synthase [Nakamurella multipartita DSM 44233]
 gi|258557472|gb|ACV80414.1| argininosuccinate synthase [Nakamurella multipartita DSM 44233]
          Length = 475

 Score = 43.4 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 28/67 (41%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + + +     + FSGG D+S  ++W  +        + D GQ ++ +L       ++   
Sbjct: 6  ESLPQGQKVGIAFSGGLDTSVAVAWMRENGAVPCAYTADLGQYDEPDLSGVPGRAQEYGA 65

Query: 63 LMPKWKD 69
           + +  D
Sbjct: 66 EIARIVD 72


>gi|291456422|ref|ZP_06595812.1| argininosuccinate synthase [Bifidobacterium breve DSM 20213]
 gi|291381699|gb|EFE89217.1| argininosuccinate synthase [Bifidobacterium breve DSM 20213]
          Length = 412

 Score = 43.4 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCV 56
          +      +L +SGG D+S  +S+  +R    V  +S D GQ  +     +   
Sbjct: 1  MADNNRLVLAYSGGLDTSVAISYLKERTGKDVVAVSLDVGQGGESLETIKERA 53


>gi|254477701|ref|ZP_05091087.1| GMP synthase [Ruegeria sp. R11]
 gi|214031944|gb|EEB72779.1| GMP synthase [Ruegeria sp. R11]
          Length = 552

 Score = 43.4 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 58/183 (31%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS       +   D++  +  D+G   K E        +++V +    
Sbjct: 255 KKVICGLSGGVDSSVAAILIHEAIGDQLTCVFVDHGLLRKNE-------AEEVVTMFRDN 307

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +            LG++       +   K +        V  ++   +  A  LA    
Sbjct: 308 YNIQLIHADESDLFLGEL---DGQSDPETKRKIIGKLFIDVFQKHADTIEGAEFLAQGTL 364

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +++  V  +             ++      L  +  + +  PL  L K E   L +++
Sbjct: 365 YPDVIESVSFSGGPSVTI------KSHHNVGGLPEKMGLKLVEPLRELFKDEVRALGREL 418

Query: 188 GGQ 190
           G  
Sbjct: 419 GLP 421


>gi|189485565|ref|YP_001956506.1| argininosuccinate synthase [uncultured Termite group 1 bacterium
          phylotype Rs-D17]
 gi|226729230|sp|B1H0L3|ASSY_UNCTG RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|170287524|dbj|BAG14045.1| argininosuccinate synthase [uncultured Termite group 1 bacterium
          phylotype Rs-D17]
          Length = 413

 Score = 43.4 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 3/55 (5%)

Query: 9  PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
             ++ +SGG D+S  LSW  +     V     D GQ    ELE      KK   
Sbjct: 17 KKVVVAYSGGLDTSIILSWVKENYGCEVVACCVDVGQ--GKELEGLDEKAKKTGA 69


>gi|91203861|emb|CAJ71514.1| conserved hypothetical protein [Candidatus Kuenenia
          stuttgartiensis]
          Length = 340

 Score = 43.4 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
           AL L SGG DS+  +    ++   V  L+F
Sbjct: 3  KALALLSGGLDSTLAIRVIQEQGIEVIALNF 33


>gi|302336528|ref|YP_003801735.1| argininosuccinate synthase [Olsenella uli DSM 7084]
 gi|301320368|gb|ADK68855.1| argininosuccinate synthase [Olsenella uli DSM 7084]
          Length = 434

 Score = 43.4 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 58/216 (26%), Gaps = 26/216 (12%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
                 +L +SGG D+S  + W   ++   V  +  + GQ    E +    V++K +++ 
Sbjct: 4   SSKEKVVLAYSGGLDTSVMVKWLQVEKGLDVVAICCNVGQ----ESQDLGWVKQKALDMG 59

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
               +S+         +  + +   LTK +A                  +   +    A+
Sbjct: 60  AVAAESV--------DMRSEYADQILTKAIAANGLYEGTYPLLSALSRPMISAYMVEAAH 111

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G   I  G                     T   +       + T    +     W  A
Sbjct: 112 HHGAAYIAHGCTGKGNDQVRFETSIHAIDP-TLRVIAPVRDWDLLTREQEMD----WAAA 166

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNS 220
            D+      +              D  +     C  
Sbjct: 167 HDVPVPTTADKPYS--------IDDNLFGRAIECGV 194


>gi|299530953|ref|ZP_07044366.1| GMP synthase [Comamonas testosteroni S44]
 gi|298720910|gb|EFI61854.1| GMP synthase [Comamonas testosteroni S44]
          Length = 538

 Score = 43.4 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 56/185 (30%), Gaps = 19/185 (10%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D+G               ++ E       
Sbjct: 229 VILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHG-------------LLRLNEGDMVMDM 275

Query: 70  SLGEDH-ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             G+ H  +       +    L      + +   +   FV           A  A   G 
Sbjct: 276 FEGKLHAKVVRVDASALFLGELAGVSEPEQKRKIIGRLFVDVFKAEAEKLKAANAGSKGA 335

Query: 129 TNIVI---GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           T +          +  G    +  TI++      L  +  + +  PL  L K E  +L  
Sbjct: 336 TFLAQGTIYPDVIESGGAKSKKAVTIKSHHNVGGLPEQLGLKLLEPLRDLFKDEVRELGV 395

Query: 186 DIGGQ 190
            +G  
Sbjct: 396 ALGLP 400


>gi|294783350|ref|ZP_06748674.1| GMP synthase [Fusobacterium sp. 1_1_41FAA]
 gi|294480228|gb|EFG28005.1| GMP synthase [Fusobacterium sp. 1_1_41FAA]
          Length = 512

 Score = 43.4 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 58/187 (31%), Gaps = 18/187 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +        ++  +  D G   K E        K+++E+  K
Sbjct: 215 NKQVILGLSGGVDSSVAAALINKAIGRQLTCIFVDTGLLRKDE-------AKQVMEVYAK 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D   +        L  ++  +  +     I    +                   A  L
Sbjct: 268 NFDMNIKCVNAEERFLSKLAGVTDPETKRKIIGKEFVE-------VFNEEAKKIEGAEFL 320

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+     P      I++      L  +    +  PL  L K E  K+ ++
Sbjct: 321 AQGTIYPDVIESVSVKGPSVT---IKSHHNVGGLPEDLKFELLEPLRELFKDEVRKVGRE 377

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 378 LGIPDYM 384


>gi|292489035|ref|YP_003531922.1| GMP synthase [Erwinia amylovora CFBP1430]
 gi|291554469|emb|CBA21985.1| GMP synthase [Erwinia amylovora CFBP1430]
 gi|312173191|emb|CBX81446.1| GMP synthase [Erwinia amylovora ATCC BAA-2158]
          Length = 534

 Score = 43.4 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 51/184 (27%), Gaps = 17/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS           DR+  +  D G    + L     V +   +     
Sbjct: 237 DKVILGLSGGVDSSVTAMLLHRAIGDRLTCVFVDNG---LLRLNEAEQVMEMFGDHFGLN 293

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  ++    A+ G     +  K +     +                           
Sbjct: 294 IIHVPAENRFLDALAGTDEPEAKRKIIGRVFVEVFDEEATKLT-------------EVKW 340

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +    I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 341 LAQGTIYPDVIESAASATGKAHVIKSHHNVGGLPKEMKLGLVEPLKELFKDEVRKIGLEL 400

Query: 188 GGQD 191
           G   
Sbjct: 401 GLPH 404


>gi|264678545|ref|YP_003278452.1| GMP synthase, large subunit [Comamonas testosteroni CNB-2]
 gi|262209058|gb|ACY33156.1| GMP synthase, large subunit [Comamonas testosteroni CNB-2]
          Length = 541

 Score = 43.4 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 56/185 (30%), Gaps = 19/185 (10%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D+G               ++ E       
Sbjct: 232 VILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHG-------------LLRLNEGDMVMDM 278

Query: 70  SLGEDH-ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             G+ H  +       +    L      + +   +   FV           A  A   G 
Sbjct: 279 FEGKLHAKVVRVDASALFLGELAGVSEPEQKRKIIGRLFVDVFKAEAEKLKAANAGSKGA 338

Query: 129 TNIVI---GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           T +          +  G    +  TI++      L  +  + +  PL  L K E  +L  
Sbjct: 339 TFLAQGTIYPDVIESGGAKSKKAVTIKSHHNVGGLPEQLGLKLLEPLRDLFKDEVRELGV 398

Query: 186 DIGGQ 190
            +G  
Sbjct: 399 ALGLP 403


>gi|260551320|ref|ZP_05825521.1| GMP synthetase [Acinetobacter sp. RUH2624]
 gi|260405634|gb|EEW99125.1| GMP synthetase [Acinetobacter sp. RUH2624]
          Length = 522

 Score = 43.4 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 50/190 (26%), Gaps = 19/190 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMP 65
               LL  SGG DSS   +       D++  +  D G  R     +      + +     
Sbjct: 224 NEKVLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRLNEGDQVMQMFAENMG---- 279

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                      +  A       ++L   V  + +   +   F+                 
Sbjct: 280 ---------IRVIRADAEQRFLNALAGEVDPEKKRKIIGREFIEVFAEEARKLDGVKFLA 330

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G           + +     +   I++      L  +    +  PL  L K E  KL  
Sbjct: 331 QGTIY----PDVIESAASKQGKAHVIKSHHNVGGLPDDLAFELVEPLRDLFKDEVRKLGT 386

Query: 186 DIGGQDLVNL 195
            +G    +  
Sbjct: 387 TLGLPHSMIY 396


>gi|126696974|ref|YP_001091860.1| carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus
           str. MIT 9301]
 gi|126544017|gb|ABO18259.1| Carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus
           str. MIT 9301]
          Length = 565

 Score = 43.4 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 22/186 (11%), Positives = 48/186 (25%), Gaps = 26/186 (13%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +AL+  SGG DS+   + A      D V  +S      +         + +++      
Sbjct: 297 KTALVGLSGGIDSALVSAIATAALGSDNVYCVSMPSKWSSSHSKSDAKDLARRLK----- 351

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR-----------NIIF 115
                     +P+  L      S  K ++ ++ +    N     R             + 
Sbjct: 352 -----ISFKSIPIENLMSSFEESFIKTISFEMAEITNQNIQSRIRGTLLMALANQEKHLL 406

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
           L         +G   +   +           + +  +       L  E  +      M  
Sbjct: 407 LSTGNKSELAVGYCTLYGDMNGGLSVIGDLYKTNVFKLCN---WLDSEDSINSRKLYMLN 463

Query: 176 KKYETW 181
              +  
Sbjct: 464 TSVDII 469


>gi|328947848|ref|YP_004365185.1| argininosuccinate synthase [Treponema succinifaciens DSM 2489]
 gi|328448172|gb|AEB13888.1| Argininosuccinate synthase [Treponema succinifaciens DSM 2489]
          Length = 454

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 6  KKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQ 44
           K    +L +SGG D++  + W  + +   V  +  D GQ
Sbjct: 34 SKKDKVVLAYSGGLDTTVIIPWLKENYDYDVIAVCIDVGQ 73


>gi|324324053|gb|ADY19313.1| tRNA(Ile)-lysidine synthetase [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 476

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 23/195 (11%), Positives = 53/195 (27%), Gaps = 21/195 (10%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D++K+  + ++  SGG DS   L + L++             R   + E  +     +  
Sbjct: 17  DVLKERSTIVVGVSGGPDSLALLYYLLEK-------------RAAKQFEIVVAHVDHMFR 63

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                 D   ED      +   +     T  + +                     F   +
Sbjct: 64  -----GDESHEDLQFVQDLCKGLGVICETIRINVSQYQQQYGMNAQVAARECRYAFLERI 118

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKKYE 179
             +     + +G    D       R       +    + ++       +  PL+ + K E
Sbjct: 119 MKKYDARYVALGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGYLIRPLLGVTKEE 178

Query: 180 TWKLAQDIGGQDLVN 194
                  +     ++
Sbjct: 179 IVDYCNKLKIIPRID 193


>gi|322804399|emb|CBZ01949.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Clostridium botulinum H04402 065]
          Length = 326

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 29/108 (26%), Gaps = 4/108 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL + SGG DS+       D+   V  + F    R+    E       K +++  +  D
Sbjct: 3   RALAMISGGLDSTLAAKLIKDQGIEVIGICF----RSYFFNEKNAERMTKQIDIPLEVVD 58

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
              E   +  +       +         +                 + 
Sbjct: 59  FSKEHLEMVKSPKHGYGKNMNPCIDCHAMMMKYSGELLKKFNADFIIT 106


>gi|314972469|gb|EFT16566.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Propionibacterium acnes HL037PA3]
          Length = 360

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 10/84 (11%), Positives = 22/84 (26%), Gaps = 12/84 (14%)

Query: 15 FSGGQDSSTCLSWALDRFDRVETLS---------FDYGQR---NKVELECRLCVRKKIVE 62
           SGG DS+   +  ++    V  +             G R   +  +         ++  
Sbjct: 1  MSGGIDSAVAAARLVEAGHDVTGVHLALSRNPRSHREGSRGCCSLEDSFAARRAADRLGI 60

Query: 63 LMPKWKDSLGEDHILPLAILGDIS 86
              W  S      +    + +  
Sbjct: 61 PFYVWDFSDRFAAEVIDPFIAEYQ 84


>gi|297183519|gb|ADI19649.1| GMP synthase, pp-ATPase domain/subunit [uncultured delta
           proteobacterium HF0770_45N15]
          Length = 624

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 63/186 (33%), Gaps = 15/186 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             L+  SGG DSS   +  +     +RV  L  D G   K E E  +   +K+     + 
Sbjct: 230 KVLMFLSGGVDSSVAFALLVKALGTERVHGLCIDNGFMRKHESEQIMACYRKLGYTNVEA 289

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +D               ++  S   +   K          +  R +  L       + LG
Sbjct: 290 RDYSATF----------LTAVSGMTDPQAKRAAVGAAFIQMHDRFLQEL-DLRPEEWMLG 338

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   + E+  + + +        ++  ++L   +   V  PL  L K E  ++ + +
Sbjct: 339 QGTLYPDIIESGGTEHANVIKSHHNRVQEVVDL--MASGQVVEPLKDLYKDEVRQVGKLL 396

Query: 188 GGQDLV 193
              + +
Sbjct: 397 DLPETL 402


>gi|299771967|ref|YP_003733993.1| GMP synthase [Acinetobacter sp. DR1]
 gi|298702055|gb|ADI92620.1| GMP synthase [Acinetobacter sp. DR1]
          Length = 522

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 50/189 (26%), Gaps = 19/189 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPK 66
              LL  SGG DSS   +       D++  +  D G  R     +      + +      
Sbjct: 225 EKVLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRLNEGDQVMQMFAENMG----- 279

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     +  A       ++L   V  + +   +   F+                  
Sbjct: 280 --------IRVIRADAEQRFLTALAGEVDPEKKRKIIGREFIEVFAEEARKLDGVKFLAQ 331

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G           + +     +   I++      L  +    +  PL  L K E  KL   
Sbjct: 332 GTIY----PDVIESAASKQGKAHVIKSHHNVGGLPDDLEFELVEPLRDLFKDEVRKLGTT 387

Query: 187 IGGQDLVNL 195
           +G    +  
Sbjct: 388 LGLPHSMIY 396


>gi|289551208|ref|YP_003472112.1| Argininosuccinate synthase [Staphylococcus lugdunensis HKU09-01]
 gi|315658710|ref|ZP_07911580.1| argininosuccinate synthase [Staphylococcus lugdunensis M23590]
 gi|289180740|gb|ADC87985.1| Argininosuccinate synthase [Staphylococcus lugdunensis HKU09-01]
 gi|315496341|gb|EFU84666.1| argininosuccinate synthase [Staphylococcus lugdunensis M23590]
          Length = 401

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
               +L +SGG D+S  + W +D+   V     D G
Sbjct: 1  MKDKIVLAYSGGLDTSVAVKWLIDKGYDVVACCLDVG 37


>gi|317051783|ref|YP_004112899.1| hypothetical protein Selin_1613 [Desulfurispirillum indicum S5]
 gi|316946867|gb|ADU66343.1| hypothetical protein Selin_1613 [Desulfurispirillum indicum S5]
          Length = 335

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
          K P  L  +SGG DS+      ++    V  + F
Sbjct: 2  KKPKVLAAYSGGLDSTLAARVMVELGFEVLAIQF 35


>gi|260171966|ref|ZP_05758378.1| tRNA-specific 2-thiouridylase MnmA [Bacteroides sp. D2]
          Length = 350

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 16/181 (8%), Positives = 41/181 (22%), Gaps = 11/181 (6%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DS+       ++   +  ++         E +    +  ++        + +   
Sbjct: 1   MSGGIDSTATCLMLQEQGYEIVGVTMRVWGD---EPQDARELAVRMGIEHYVADERIPFK 57

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
             +    + +                  + N     R +         A+        + 
Sbjct: 58  ETIVKNFIDEYKQGRTPNP-------CVMCNPLFKFRVLTEWADKLNCAWIATGHYSRLE 110

Query: 135 VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVN 194
                            ++      LG E       PL    K +  +   + G +    
Sbjct: 111 EKNGYTYIVAGDDDKKDQSYF-LWRLGQEVLKRCIFPLGDYTKVKVREYLAEKGYEAKSK 169

Query: 195 L 195
            
Sbjct: 170 E 170


>gi|163940043|ref|YP_001644927.1| asparagine synthase (glutamine-hydrolyzing) [Bacillus
           weihenstephanensis KBAB4]
 gi|229011526|ref|ZP_04168712.1| Asparagine synthetase [Bacillus mycoides DSM 2048]
 gi|229059923|ref|ZP_04197297.1| Asparagine synthetase [Bacillus cereus AH603]
 gi|229133082|ref|ZP_04261920.1| Asparagine synthetase [Bacillus cereus BDRD-ST196]
 gi|229167090|ref|ZP_04294833.1| Asparagine synthetase [Bacillus cereus AH621]
 gi|163862240|gb|ABY43299.1| asparagine synthase (glutamine-hydrolyzing) [Bacillus
           weihenstephanensis KBAB4]
 gi|228616324|gb|EEK73406.1| Asparagine synthetase [Bacillus cereus AH621]
 gi|228650380|gb|EEL06377.1| Asparagine synthetase [Bacillus cereus BDRD-ST196]
 gi|228719336|gb|EEL70940.1| Asparagine synthetase [Bacillus cereus AH603]
 gi|228749681|gb|EEL99520.1| Asparagine synthetase [Bacillus mycoides DSM 2048]
          Length = 633

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 21/53 (39%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            SGG DSS   S A +    + T S  + QR   E++      +K+       
Sbjct: 263 LSGGIDSSIIASIAREMNPNLLTFSIGFEQRGFSEVDVAKETAEKLGVKNHNV 315


>gi|84389775|ref|ZP_00991327.1| Cell cycle protein MesJ [Vibrio splendidus 12B01]
 gi|84376876|gb|EAP93750.1| Cell cycle protein MesJ [Vibrio splendidus 12B01]
          Length = 444

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 16/54 (29%), Gaps = 4/54 (7%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALD----RFDRVETLSFDYGQRNKVELECRLCV 56
          K    ++ FSGG DS   L  A             +   +G     +     C 
Sbjct: 18 KPNRLIVAFSGGVDSRVLLELAAQYAQTHGIECCAVHVHHGLSKNADHWAEQCQ 71


>gi|90426215|ref|YP_534585.1| tRNA(Ile)-lysidine synthetase-like [Rhodopseudomonas palustris
          BisB18]
 gi|90108229|gb|ABD90266.1| tRNA(Ile)-lysidine synthetase-like [Rhodopseudomonas palustris
          BisB18]
          Length = 346

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 8/61 (13%)

Query: 10 SALLL-FSGGQDSSTCLSW------ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           A++L  SGG DS   +        AL R   +  ++ D+G R +   E    V++   E
Sbjct: 25 KAVVLAVSGGPDSLALMWLAARWRKALRRGPAISVITVDHGLRPEAARE-ARDVKRHAAE 83

Query: 63 L 63
          L
Sbjct: 84 L 84


>gi|332883440|gb|EGK03723.1| tRNA-specific 2-thiouridylase mnmA [Dysgonomonas mossii DSM 22836]
          Length = 358

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 54/190 (28%), Gaps = 6/190 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
               L SGG DSS  +    ++           G   + E     C  ++ +E+      
Sbjct: 2   KIAALVSGGVDSSVVVHQLKEQGYDPTIFYIRIGM--EDEQGYIDCPAEEDIEITTYIAK 59

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G    + +++  +   + ++  +    +        +  + I F  F     +     
Sbjct: 60  KYGCKMEV-VSLHEEYWENVVSYTIDAVKRGLTPNPDMMCNKLIKFGCFEQKWGHEFDKI 118

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLAQD 186
                   T+ +G            +    LG   ++ V     P+  L K +   +A  
Sbjct: 119 ATGHYATTTEINGKTWLSTAKDHVKDQTYFLGQIDYLQVSKLMFPIGNLLKSKVRAIAAQ 178

Query: 187 IGGQDLVNLI 196
            G        
Sbjct: 179 AGLPSAQRKD 188


>gi|300119157|ref|ZP_07056858.1| cell cycle protein [Bacillus cereus SJ1]
 gi|298723479|gb|EFI64220.1| cell cycle protein [Bacillus cereus SJ1]
          Length = 279

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 53/197 (26%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSW-----ALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           D++K+  + ++  SGG DS   L +     A  +F+ V     D    +    +      
Sbjct: 17  DVLKERSTIVVGVSGGPDSLALLYYLLEKRAAKQFEIVVA-HVD----HMFRGDESHEDL 71

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           + + +L            I           ++       +             R  + L 
Sbjct: 72  QFVQDLCKGLGVICETIRINVSQYQKQYGMNAQVAARECRYAFLERIMKKYDAR-YVALG 130

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                     +  +V G     Y+G    R                    +  PL+ + K
Sbjct: 131 HHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNG--------------YLIRPLLGVTK 176

Query: 178 YETWKLAQDIGGQDLVN 194
            E      ++     ++
Sbjct: 177 EEIVNYCNELKIIPRID 193


>gi|262172655|ref|ZP_06040333.1| LPS biosynthesis protein WbpG [Vibrio mimicus MB-451]
 gi|261893731|gb|EEY39717.1| LPS biosynthesis protein WbpG [Vibrio mimicus MB-451]
          Length = 378

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 21/190 (11%), Positives = 42/190 (22%), Gaps = 8/190 (4%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            ++  SGG DSS     A ++   R      D G      +     +   +   +     
Sbjct: 69  CIIGLSGGLDSSYAAYIAKEKMGLRPLLFHVDAGWNTDQAVGNIEKLVDGLGLDLYTEVV 128

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +  E   L +A L      +   +  +          +   R            +     
Sbjct: 129 NWDEMRRLQVAFLR-----AGIPDQDLVQDAAFFSGLYKFARRHGIKHIITGSNFSTECC 183

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                                  +      L       +    +W +K    K+   +  
Sbjct: 184 REPEEWGGYLGIDKTLFGDIW--SRFGEGELKTFPLTDILVYKLWYQKVLGMKVHHPLNL 241

Query: 190 QDLVNLILEE 199
              V    E 
Sbjct: 242 VPYVKQDAEN 251


>gi|256544685|ref|ZP_05472057.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Anaerococcus vaginalis ATCC 51170]
 gi|256399574|gb|EEU13179.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Anaerococcus vaginalis ATCC 51170]
          Length = 369

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 48/177 (27%), Gaps = 10/177 (5%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS            V  +          E E  +C  +   E   K  + +G  
Sbjct: 15  VSGGVDSSVAALLLKKEGYDVSGIFMKNW---DEEDENGVCTAEVDYEDAVKVCNQIGIP 71

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
           +           +  +      + +    PN  +     I        A  LG   +  G
Sbjct: 72  Y--YSINFEKEYYDRVFSYFLDEYKKGRTPNPDIMCNKEIKFKAFLDYAKDLGADYLATG 129

Query: 135 VCETDYSGY---PDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYETWKLAQD 186
                          R       +T     L  +    V  P+  L K E  K+A++
Sbjct: 130 HYARVDRSEGETKMLRGLDSNKDQTYFLSQLSQDQIKDVLFPVGDLDKKEVRKIAKE 186


>gi|167042206|gb|ABZ06938.1| putative tRNA methyl transferase [uncultured marine crenarchaeote
          HF4000_ANIW93I24]
          Length = 268

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 1/64 (1%)

Query: 8  APSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            S L+  SGG DS+     A         +++ DY    + ELE    +  +I      
Sbjct: 16 KNSVLVALSGGVDSALVAYSAYAKLGKSAISVTADYKTLAQEELEYAKKISLEIGIKHIV 75

Query: 67 WKDS 70
           + +
Sbjct: 76 IEYN 79


>gi|116671415|ref|YP_832348.1| GMP synthase [Arthrobacter sp. FB24]
 gi|116611524|gb|ABK04248.1| GMP synthase (glutamine-hydrolyzing) [Arthrobacter sp. FB24]
          Length = 529

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 48/182 (26%), Gaps = 11/182 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +       D++  +  D+G   + E      V +  V       
Sbjct: 226 RVICGLSGGVDSAVAAALVQRAVGDQLTCVFVDHGLLREGE---AEQVERDFVAATGVKL 282

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E      A+ G    S       +  ++            I            L  
Sbjct: 283 YVANEQERFQAALAG---VSDPETKRKIIGREFIRAFEEAELAIIAEAAAHGEKIKFLVQ 339

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+            I++      L  +    +  PL  L K E   +   +G
Sbjct: 340 GTLYPDVVESGGG----EGAANIKSHHNVGGLPEDLQFELVEPLRALFKDEVRAVGAQLG 395

Query: 189 GQ 190
             
Sbjct: 396 LP 397


>gi|330001721|ref|ZP_08304094.1| tRNA(Ile)-lysidine synthetase [Klebsiella sp. MS 92-3]
 gi|328537568|gb|EGF63790.1| tRNA(Ile)-lysidine synthetase [Klebsiella sp. MS 92-3]
          Length = 349

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 10/70 (14%)

Query: 12 LLLFSGGQDSSTCLS---WALDRFDRVE--TLSFDYGQRNKVELECRLCVRKKIVELMPK 66
          L+ FSGG DS+  L       ++   +    +   +G     +     C      ++  +
Sbjct: 20 LVAFSGGLDSTVLLHQLVLLREQDPSLTLRAVHVHHGLSVHADDWVAHC-----RQICQQ 74

Query: 67 WKDSLGEDHI 76
          W+  LG  H+
Sbjct: 75 WQVPLGVHHV 84


>gi|315645200|ref|ZP_07898326.1| GMP synthase, large subunit [Paenibacillus vortex V453]
 gi|315279621|gb|EFU42926.1| GMP synthase, large subunit [Paenibacillus vortex V453]
          Length = 512

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 57/185 (30%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS           D++  +  D+G                   L+ K +
Sbjct: 219 KVLCALSGGVDSSVVAMLIHRAIGDQLTCMFIDHG-------------------LLRKGE 259

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                +  +    +  +   +  + ++     ++         N    VF    +     
Sbjct: 260 AESVMETFVGKFDMKVVKIDAQERFMSKLKGVDDPEKKRKIIGNEFIYVFDEESSKFDDF 319

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G   TD          TI++      L  +   T+  PL  L K E  K+ +++G
Sbjct: 320 AFLAQGTLYTDIVESGTETAHTIKSHHNVGGLPEDMKFTLIEPLKALFKDEVRKVGEELG 379

Query: 189 GQDLV 193
             + +
Sbjct: 380 LPEAI 384


>gi|228474151|ref|ZP_04058888.1| GMP synthase [Staphylococcus hominis SK119]
 gi|314935155|ref|ZP_07842508.1| GMP synthase [Staphylococcus hominis subsp. hominis C80]
 gi|228271846|gb|EEK13183.1| GMP synthase [Staphylococcus hominis SK119]
 gi|313656490|gb|EFS20229.1| GMP synthase [Staphylococcus hominis subsp. hominis C80]
          Length = 513

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 56/187 (29%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS           D++  +  D+G   K E +    V ++  E    
Sbjct: 218 HRKVLCAMSGGVDSSVVAVLLHKAIGDQLTCIFVDHGLLRKGEGDM---VMEQFGEGF-- 272

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                          +  I  ++  + +      ++         N    VF    A   
Sbjct: 273 --------------DMNIIRVNAKERFMEKLKGVSDPEKKRKIIGNEFVYVFDDEAAKLT 318

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +  +  G   TD          TI++      L  +    +  P+  L K E   L  +
Sbjct: 319 DVDFLAQGTLYTDVIESGTKTAQTIKSHHNVGGLPEDMEFELIEPINTLFKDEVRALGIE 378

Query: 187 IGGQDLV 193
           +G  + +
Sbjct: 379 LGIPEHL 385


>gi|170760015|ref|YP_001785458.1| hypothetical protein CLK_3304 [Clostridium botulinum A3 str. Loch
          Maree]
 gi|169407004|gb|ACA55415.1| conserved hypothetical protein [Clostridium botulinum A3 str.
          Loch Maree]
          Length = 326

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 24/65 (36%), Gaps = 4/65 (6%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           AL + SGG DS+       D+   V  + F    R+    E       K +++  +  D
Sbjct: 3  RALAMISGGLDSTLAAKLIKDQGIEVIGICF----RSYFFNEKNAERMTKQIDIPLEVVD 58

Query: 70 SLGED 74
             E 
Sbjct: 59 FSKEH 63


>gi|154509654|ref|ZP_02045296.1| hypothetical protein ACTODO_02187 [Actinomyces odontolyticus ATCC
           17982]
 gi|153799288|gb|EDN81708.1| hypothetical protein ACTODO_02187 [Actinomyces odontolyticus ATCC
           17982]
          Length = 518

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 50/184 (27%), Gaps = 11/184 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DSS   +       D++     D+G     E E          ++   +  
Sbjct: 216 VICALSGGVDSSVAAALVHKAVGDQLTCFFIDHGLLRAGERE----------QVENDYAR 265

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +G   I        +S  +       K +                ++     A      
Sbjct: 266 GMGIRVITCDESERFLSALAGVTEPEAKRKIIGREFIRSFEAAQKQVIEEVGAAGGEVKF 325

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +    +  PL  L K E   + +++G 
Sbjct: 326 LVQGTLYPDVVESGGGEGAANIKSHHNVGGLPEDMTFELVEPLRTLFKDEVRAVGRELGL 385

Query: 190 QDLV 193
            + +
Sbjct: 386 PNYL 389


>gi|118576754|ref|YP_876497.1| ATP-utilizing enzyme of the PP-loop superfamily [Cenarchaeum
          symbiosum A]
 gi|118195275|gb|ABK78193.1| ATP-utilizing enzyme of the PP-loop superfamily [Cenarchaeum
          symbiosum A]
          Length = 264

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 1/53 (1%)

Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
            ++  SGG DS+     A     D    ++ DY    + EL     V  +I 
Sbjct: 16 RVMVALSGGVDSALVAYAAHRALGDGAIAVTADYKTLAQDELADAKRVCSEIG 68


>gi|288560676|ref|YP_003424162.1| GMP synthase subunit B GuaAb [Methanobrevibacter ruminantium M1]
 gi|288543386|gb|ADC47270.1| GMP synthase subunit B GuaAb [Methanobrevibacter ruminantium M1]
          Length = 308

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 52/186 (27%), Gaps = 28/186 (15%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              ++  SGG DSS C     +   D +  +  ++G   + E      V           
Sbjct: 22  EKTIIALSGGVDSSVCSVLTQEAIGDNLTAVFVNHGLLREGE---AEQVC---------- 68

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                   +    +      +S      +   ++      + GR  I +      A  + 
Sbjct: 69  -------SVFEERLNFKYIDASDEFLSELAGVEDPEEKRKIIGRVFIEVFEREAQA--VD 119

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +V G              +        + L     + V  P+  L K E   +  ++
Sbjct: 120 AKYLVQGTIA-----PDWIETEGEIKTHHNMALPSGMVLKVVEPVRDLYKDEVRLVGTEL 174

Query: 188 GGQDLV 193
           G  D +
Sbjct: 175 GLPDSI 180


>gi|262276498|ref|ZP_06054307.1| GMP synthase [glutamine-hydrolyzing] [Grimontia hollisae CIP
           101886]
 gi|262220306|gb|EEY71622.1| GMP synthase [glutamine-hydrolyzing] [Grimontia hollisae CIP
           101886]
          Length = 525

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 53/181 (29%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS           D++  +  D G     E        ++++E+      
Sbjct: 230 VILGLSGGVDSSVVAMLIHRAIGDKLTCVFVDNGLLRLNE-------AQQVMEMFGDHFG 282

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                       L  +   S         ++       V              A  L   
Sbjct: 283 LNIIHVDAEERFLSALEGISDP-------EEKRKKIGHVFVDVFDEESKKLKNAKWLAQG 335

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S     +   I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 336 TIYPDVIESAAS--KTGKAHVIKSHHNVGGLPDDMEMGLVEPLKELFKDEVRKIGLELGL 393

Query: 190 Q 190
            
Sbjct: 394 P 394


>gi|213409906|ref|XP_002175723.1| GMP synthase [Schizosaccharomyces japonicus yFS275]
 gi|212003770|gb|EEB09430.1| GMP synthase [Schizosaccharomyces japonicus yFS275]
          Length = 539

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 58/193 (30%), Gaps = 13/193 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
             +I      +   SGG DS+       +   DR   +  D G    + L     VR+ +
Sbjct: 230 RKMIGPNEHVIGAVSGGVDSTVAAKVLKEAIDDRFHAIMVDNG---LLRLNEAEEVRQTL 286

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            E +        +  ++  +       + +T     +    N             +   +
Sbjct: 287 GEYL------GIKLTVVDASEEFIGKLAGVTDPEKKRKIIGNTFIHVFEREAERIVSETS 340

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
                L    +   V E   S        TI+       L  +  + +  PL  L K E 
Sbjct: 341 GKVEYLLQGTLYPDVIE---SISFKGPSQTIKTHHNVGGLLADMKLKLIEPLRELFKDEV 397

Query: 181 WKLAQDIGGQDLV 193
            +L + +G +  +
Sbjct: 398 RQLGELLGIEHSL 410


>gi|297619697|ref|YP_003707802.1| Queuosine synthesis-like protein [Methanococcus voltae A3]
 gi|297378674|gb|ADI36829.1| Queuosine synthesis-like protein [Methanococcus voltae A3]
          Length = 275

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 6  KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
          K    AL+ FSGG DS+     A   F + E ++ +
Sbjct: 52 KSNSKALVAFSGGVDSTVSALIAKKLF-KTELITVN 86


>gi|153938098|ref|YP_001389492.1| hypothetical protein CLI_0184 [Clostridium botulinum F str.
          Langeland]
 gi|152933994|gb|ABS39492.1| conserved hypothetical protein [Clostridium botulinum F str.
          Langeland]
 gi|295317593|gb|ADF97970.1| conserved hypothetical protein [Clostridium botulinum F str.
          230613]
          Length = 326

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 24/65 (36%), Gaps = 4/65 (6%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           AL + SGG DS+       D+   V  + F    R+    E       K +++  +  D
Sbjct: 3  RALAMISGGLDSTLAAKLIKDQGIEVIGICF----RSYFFNEKNAERMTKQIDIPLEVVD 58

Query: 70 SLGED 74
             E 
Sbjct: 59 FSKEH 63


>gi|149182089|ref|ZP_01860573.1| hypothetical protein BSG1_08716 [Bacillus sp. SG-1]
 gi|148850191|gb|EDL64357.1| hypothetical protein BSG1_08716 [Bacillus sp. SG-1]
          Length = 532

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 19/55 (34%), Gaps = 1/55 (1%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           K    +L  SGG DS           +    ++F YG+R   E      +   + 
Sbjct: 189 KNKKIVLPLSGGYDSRIIALLLKKFGNDNI-IAFTYGKRQNKEAGISEGIAHGLN 242


>gi|14590200|ref|NP_142265.1| hypothetical protein PH0276 [Pyrococcus horikoshii OT3]
 gi|3256665|dbj|BAA29348.1| 206aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 206

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 25/69 (36%), Gaps = 4/69 (5%)

Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYG----QRNKVELECRLCVRKKIVELMPKWKD 69
          LFSGG+DSS            V  ++  +G     +   E    L    ++V L  +  +
Sbjct: 8  LFSGGKDSSLAAWILRKLGYEVRLVTITFGVLDNWKYAKETADILGFEHEVVRLPRELLN 67

Query: 70 SLGEDHILP 78
             E  I  
Sbjct: 68 MAVEMCIED 76


>gi|148263752|ref|YP_001230458.1| hypothetical protein Gura_1690 [Geobacter uraniireducens Rf4]
 gi|146397252|gb|ABQ25885.1| hypothetical protein Gura_1690 [Geobacter uraniireducens Rf4]
          Length = 380

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 43/166 (25%), Gaps = 8/166 (4%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            ++  SGG DSS C   A ++   R      D G      +     +   +   +     
Sbjct: 71  CIIGLSGGLDSSYCTYIAKEKMGLRPLLFHVDAGWNTDQAVGNIEKLVDGLGLDLYTEVI 130

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E   L +A+L      S   +  +          +   R            Y     
Sbjct: 131 YWEEMKDLQVALLK-----SQIADQDIPQDTAFFSMLYKFARQHKIKYVLTGGNYSTECC 185

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
                     Y G      + I ++   + L     V +    ++ 
Sbjct: 186 REPEEW--GAYPGIDKTLINDIHSMFGKLPLTTFPIVDIFAYKIYY 229


>gi|317498604|ref|ZP_07956897.1| GMP synthase domain-containing protein [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316894091|gb|EFV16280.1| GMP synthase domain-containing protein [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 515

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 44/185 (23%), Gaps = 16/185 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS            ++  +  D+G   K E +    V            
Sbjct: 218 KVLLALSGGVDSSVAAGLLSRAIGKQLTCVFVDHGLLRKDEGDEVEGV------------ 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              GE+    L  +   +       +     +       +    I      A     +  
Sbjct: 266 --FGENGQFDLNFIRVNAQQRYYDKLKGVT-EPEAKRKIIGEEFIRIFEEEAKKIGAVDF 322

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   SG                         +  PL  L K E  +    +G
Sbjct: 323 LAQGTIYPDVVESGLGGESAVIKSHHNVGGLPDFVDFKEIIEPLRDLFKDEVRQAGLQLG 382

Query: 189 GQDLV 193
             + +
Sbjct: 383 IPERL 387


>gi|303327373|ref|ZP_07357814.1| argininosuccinate synthase [Desulfovibrio sp. 3_1_syn3]
 gi|302862313|gb|EFL85246.1| argininosuccinate synthase [Desulfovibrio sp. 3_1_syn3]
          Length = 401

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQ 44
          ++     +L +SGG D+S  L W ++ +   V T + D GQ
Sbjct: 1  MQDVKKVVLAYSGGLDTSVILKWLIETYHCEVITCTADLGQ 41


>gi|289612991|emb|CBI59975.1| unnamed protein product [Sordaria macrospora]
          Length = 400

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 52/183 (28%), Gaps = 17/183 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS       +   +++  +  D G     E        +++V L     
Sbjct: 104 KVICGLSGGVDSSVAALLIHEAIGEQLTCVFVDGGILRAGE-------AEQVVSLFR--- 153

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 + +PL  +                +                       A  L  
Sbjct: 154 ----GHYNIPLVHVDAQDLFMDGLAGVTDPEAKRKFIGKTFIDVFEAEANKLGGAQFLAQ 209

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+    +      TI++      L    ++ +  PL  L K E   L +++G
Sbjct: 210 GTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMNMALVEPLRELFKDEVRALGRELG 267

Query: 189 GQD 191
             D
Sbjct: 268 LPD 270


>gi|253583212|ref|ZP_04860410.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium varium ATCC
          27725]
 gi|251833784|gb|EES62347.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium varium ATCC
          27725]
          Length = 273

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 22/60 (36%), Gaps = 2/60 (3%)

Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            +L  SGG DS+     A   F  + V  +   Y   +K  +E    V K +     K 
Sbjct: 30 KVVLGLSGGIDSALVAFLAAKAFGPENVLGIMMPYKTSSKESVEHAELVIKALGIRSKKI 89


>gi|256810256|ref|YP_003127625.1| GMP synthase, large subunit [Methanocaldococcus fervens AG86]
 gi|256793456|gb|ACV24125.1| GMP synthase, large subunit [Methanocaldococcus fervens AG86]
          Length = 321

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 19/50 (38%), Gaps = 1/50 (2%)

Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
           A++  SGG DSS           +++  +  D G   K E E      +
Sbjct: 34 KAIIALSGGVDSSVAAVLTHKAIGNKLTAVFVDTGLMRKGEREEVEKTFR 83


>gi|190570912|ref|YP_001975270.1| GMP synthase [Wolbachia endosymbiont of Culex quinquefasciatus Pel]
 gi|213019428|ref|ZP_03335234.1| GMP synthase [Wolbachia endosymbiont of Culex quinquefasciatus JHB]
 gi|226739765|sp|B3CPU7|GUAA_WOLPP RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|190357184|emb|CAQ54600.1| GMP synthase [Wolbachia endosymbiont of Culex quinquefasciatus Pel]
 gi|212994850|gb|EEB55492.1| GMP synthase [Wolbachia endosymbiont of Culex quinquefasciatus JHB]
          Length = 520

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 58/189 (30%), Gaps = 24/189 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS            ++  +  D G   K +              + +
Sbjct: 220 EKKVIAAVSGGVDSSVAAVLTHKAIGKQLNCIFIDTGLLRKSQTTAM----------LKE 269

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +  +   L L+ L  I+     + +                 ++ FL+     +  +
Sbjct: 270 IPINYVDKSNLFLSRLKGITDPEEKRKIIGNTFIEVFEEEAKKIGDVDFLMQGTIYSDVV 329

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                         SG+      TI++      L  + ++ +  PL +L K E   L ++
Sbjct: 330 E-------------SGHASGNTSTIKSHHNVGGLPEKMNLKLVEPLRYLFKDEVRLLGKE 376

Query: 187 IGGQDLVNL 195
           IG  D +  
Sbjct: 377 IGLSDEIIF 385


>gi|188589844|ref|YP_001922242.1| argininosuccinate synthase [Clostridium botulinum E3 str. Alaska
           E43]
 gi|229889869|sp|B2UYI0|ASSY_CLOBA RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|188500125|gb|ACD53261.1| argininosuccinate synthase [Clostridium botulinum E3 str. Alaska
           E43]
          Length = 407

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 60/210 (28%), Gaps = 12/210 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + K    +L +SGG D+S  + W  + +   V  +  + GQ+++++      ++    +L
Sbjct: 1   MNKLNKVILAYSGGLDTSIIIPWLKENYNCEVIAVCGNVGQKDELDGLEEKAIKTGASKL 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQ---DNNLPNTFVPGRNIIFLVFA 119
                     ED+I P    G I         +          +    V G + I     
Sbjct: 61  YMEDLTKEFVEDYIFPTIQAGAIYEGKYLLGTSFARPLIGKRLVEIAKVEGADAICHGCT 120

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
                ++     V           P    D     +        +            K +
Sbjct: 121 GKGNDQVRFELAVKAFDPDMKIIAPWRIWDIKSREDEITYAEARNVPIKINHETNYSKDK 180

Query: 180 TWKLAQDIG-------GQDLVNLILEESHT 202
                   G        +   + ILE S++
Sbjct: 181 NIWHLSHEGLDLEDPKNEPKYDEILELSNS 210


>gi|168204658|ref|ZP_02630663.1| argininosuccinate synthase [Clostridium perfringens E str. JGS1987]
 gi|170663838|gb|EDT16521.1| argininosuccinate synthase [Clostridium perfringens E str. JGS1987]
          Length = 403

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 46/158 (29%), Gaps = 9/158 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +KK    +L +SGG D+S  + W  +     V  +  + GQ +++       ++    ++
Sbjct: 1   MKKFNKVILAYSGGLDTSIIIPWLKENYGCEVIAVVGNVGQSDELVGLKEKAIKTGASKI 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     ED+I P    G              +   +     +  R +         
Sbjct: 61  YIEDLTKEFVEDYIFPTIQAGAKYEG-------KYLLGTSFARPIIAKRLVEIAKLEGAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         + +         I A      +
Sbjct: 114 AICHGCTGKGNDQVRFELAIKTFNAEMQIIAPWRTWEI 151


>gi|168182262|ref|ZP_02616926.1| conserved hypothetical protein [Clostridium botulinum Bf]
 gi|237793447|ref|YP_002860999.1| hypothetical protein CLJ_B0167 [Clostridium botulinum Ba4 str.
          657]
 gi|182674625|gb|EDT86586.1| conserved hypothetical protein [Clostridium botulinum Bf]
 gi|229262133|gb|ACQ53166.1| conserved hypothetical protein [Clostridium botulinum Ba4 str.
          657]
          Length = 326

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 24/65 (36%), Gaps = 4/65 (6%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           AL + SGG DS+       D+   V  + F    R+    E       K +++  +  D
Sbjct: 3  RALAMISGGLDSTLAAKLIKDQGIEVIGICF----RSYFFNEKNAERMTKQIDIPLEVVD 58

Query: 70 SLGED 74
             E 
Sbjct: 59 FSKEH 63


>gi|195953020|ref|YP_002121310.1| GMP synthase, large subunit [Hydrogenobaculum sp. Y04AAS1]
 gi|195932632|gb|ACG57332.1| GMP synthase, large subunit [Hydrogenobaculum sp. Y04AAS1]
          Length = 507

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 1/55 (1%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
               +   SGG DS+           D++  +  D+G   K E +  +    K+ 
Sbjct: 213 NKKVICAISGGVDSAVAAVLTHKAIGDKLTCIFVDHGLLRKNESKEVISNLTKLG 267


>gi|148378135|ref|YP_001252676.1| hypothetical protein CBO0129 [Clostridium botulinum A str. ATCC
          3502]
 gi|153930964|ref|YP_001382536.1| hypothetical protein CLB_0165 [Clostridium botulinum A str. ATCC
          19397]
 gi|153937112|ref|YP_001386088.1| hypothetical protein CLC_0177 [Clostridium botulinum A str. Hall]
 gi|148287619|emb|CAL81684.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
          3502]
 gi|152927008|gb|ABS32508.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
          19397]
 gi|152933026|gb|ABS38525.1| conserved hypothetical protein [Clostridium botulinum A str.
          Hall]
          Length = 326

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 24/65 (36%), Gaps = 4/65 (6%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           AL + SGG DS+       D+   V  + F    R+    E       K +++  +  D
Sbjct: 3  RALAMISGGLDSTLAAKLIKDQGIEVIGICF----RSYFFNEKNAERMTKQIDIPLEVVD 58

Query: 70 SLGED 74
             E 
Sbjct: 59 FSKEH 63


>gi|145250519|ref|XP_001396773.1| argininosuccinate synthase [Aspergillus niger CBS 513.88]
 gi|134082293|emb|CAK42337.1| unnamed protein product [Aspergillus niger]
          Length = 417

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 23/215 (10%), Positives = 44/215 (20%), Gaps = 26/215 (12%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  + P   L +SGG D+S  L W ++    V     + GQ    E +      K +   
Sbjct: 1   MASEKPRVCLAYSGGLDTSCILRWLIEEGYDVVCFLGNVGQ----EEDWAAVEAKAL--- 53

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  +G   ++   +  +         +                   +        A
Sbjct: 54  ------KIGAKKMIIEDLRREFITELCFPAIQCNAIYEGRYLLGTSLARPVIARAQMRAA 107

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
            R G   +         +              +   +                  +    
Sbjct: 108 QREGCQFV-SHGATGKGNDQVRFELAFYAIQPSIKVIAPWRDPKFFKRFAGRN--DLLDY 164

Query: 184 AQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGC 218
           A   G             T    K          C
Sbjct: 165 AAQTGIP----------VTSTKAKPWSMDANSAHC 189


>gi|229542770|ref|ZP_04431830.1| ExsB family protein [Bacillus coagulans 36D1]
 gi|229327190|gb|EEN92865.1| ExsB family protein [Bacillus coagulans 36D1]
          Length = 269

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRK 58
          +  I+K+  S ++ FSGG DS+  L  A+D    D+V  ++ D       ELE    +  
Sbjct: 8  LKQILKEMDSVVVAFSGGVDSTFLLKVAVDVLGADKVLAVTADSETYPSTELEEAKKLAA 67

Query: 59 KIVELMPKWK 68
           I       K
Sbjct: 68 LIGARHQVIK 77


>gi|21232029|ref|NP_637946.1| cell cycle protein [Xanthomonas campestris pv. campestris str.
          ATCC 33913]
 gi|66767844|ref|YP_242606.1| cell cycle protein [Xanthomonas campestris pv. campestris str.
          8004]
 gi|61217383|sp|Q8P7L3|TILS_XANCP RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
          Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
          Full=tRNA(Ile)-lysidine synthetase
 gi|81306178|sp|Q4UWI7|TILS_XANC8 RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
          Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
          Full=tRNA(Ile)-lysidine synthetase
 gi|21113767|gb|AAM41870.1| cell cycle protein [Xanthomonas campestris pv. campestris str.
          ATCC 33913]
 gi|66573176|gb|AAY48586.1| cell cycle protein [Xanthomonas campestris pv. campestris str.
          8004]
          Length = 435

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 24/57 (42%), Gaps = 5/57 (8%)

Query: 11 ALLLFSGGQDSSTCL-SWALDRFDR---VETLSFDYGQRNKVELECRLCVRKKIVEL 63
           L+ +SGG DS+  L + A     R   +  +   +G  +       L  +++  +L
Sbjct: 18 VLVAYSGGMDSAVLLHALAATDGYREAGLRAVHVHHG-LHADADAWALHCQQQCADL 73


>gi|86134145|ref|ZP_01052727.1| GMP synthase [Polaribacter sp. MED152]
 gi|85821008|gb|EAQ42155.1| GMP synthase [Polaribacter sp. MED152]
          Length = 511

 Score = 43.4 bits (100), Expect = 0.025,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 51/187 (27%), Gaps = 18/187 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS             +  +  + G   K E E  L   + +      
Sbjct: 214 NDKVVLGLSGGVDSSVAAVLLHKAIGKNLYCIFVNNGLLRKNEFESVLKQYEGMG----- 268

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 +     L  L  +S     +        +   +     +++ +L         +
Sbjct: 269 LNVKGVDASERFLTKLAGLSDPEAKRKAIGNTFIDVFDDEAHQIKDVKWLAQGTIYPDVI 328

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
              ++  G   T             ++      L     + +  PL  + K E  ++   
Sbjct: 329 ESVSVNGGPSATI------------KSHHNVGGLPDFMKLKIVEPLRMIFKDEVRRVGAS 376

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 377 MGIDKQL 383


>gi|324014127|gb|EGB83346.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 60-1]
          Length = 437

 Score = 43.4 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 27/76 (35%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
          +N  +  +   L+ FSGG DS+  L   +        ++      +           K  
Sbjct: 5  LNRQLLSSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHGLSANADAWVKHC 64

Query: 61 VELMPKWKDSLGEDHI 76
            +  +W+  LG + +
Sbjct: 65 ENICQQWQGPLGVERV 80


>gi|312877002|ref|ZP_07736976.1| PP-loop domain protein [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796233|gb|EFR12588.1| PP-loop domain protein [Caldicellulosiruptor lactoaceticus 6A]
          Length = 303

 Score = 43.4 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 20/59 (33%), Gaps = 2/59 (3%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD--YGQRNKVELECRLCVRKK 59
            +  K    L++ SGG+DS             V  +  +   GQ +    +      +K
Sbjct: 42  RMFDKKDKVLVVISGGKDSMALWHILASEGYNVTGMYINLGIGQYSDKSQQVVESFAQK 100


>gi|312128625|ref|YP_003993499.1| PP-loop domain-containing protein [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311778644|gb|ADQ08130.1| PP-loop domain protein [Caldicellulosiruptor hydrothermalis 108]
          Length = 303

 Score = 43.4 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 20/59 (33%), Gaps = 2/59 (3%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD--YGQRNKVELECRLCVRKK 59
            +  K    L++ SGG+DS             V  +  +   GQ +    +      +K
Sbjct: 42  KMFDKKDKILVVISGGKDSMALWHILASEGYNVTGMYINLGIGQYSDKSQQVVESFAQK 100


>gi|309792325|ref|ZP_07686795.1| NAD synthetase [Oscillochloris trichoides DG6]
 gi|308225640|gb|EFO79398.1| NAD synthetase [Oscillochloris trichoides DG6]
          Length = 322

 Score = 43.4 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 71/237 (29%), Gaps = 33/237 (13%)

Query: 1   MNDIIK---KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLC 55
           M  II+   +   A++  SGG DS+T L  A+  F  +RV  +       + V     L 
Sbjct: 23  MRQIIQQDFRRRGAVVGLSGGIDSATVLGLAVRAFGAERVLAVMMPEKASSPVSEAYALQ 82

Query: 56  VRKKIVELMPK-----------------------WKDSLGEDHILPLAILGDISHSSLTK 92
           +  K      K                       + D       + L + GD+       
Sbjct: 83  LAAKFGVQAIKEDLTAGLEGLGCYARQDEAVRSVFPDYDPAVDKIKLVLPGDLLERGSLN 142

Query: 93  NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIR 152
             ++ +   +            +L   A    +     +++       +       +   
Sbjct: 143 VYSLSLTGADGVEQRRVLPVAAYLQIVAASNMKQRSRMLMLYYHAEQRNYAVIGTANRNE 202

Query: 153 AIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG--GQDLVNLILEESHT--CYL 205
             +       +    +  P+  L K + ++LA  +G   + +      +++T  C  
Sbjct: 203 HAQGFFVKYGDGGADI-QPIQHLYKTQIYQLAHYLGVTQEIIARTPTTDTYTAECSQ 258


>gi|237732484|ref|ZP_04562965.1| bifunctional GMP synthase/glutamine amidotransferase [Citrobacter
           sp. 30_2]
 gi|226908023|gb|EEH93941.1| bifunctional GMP synthase/glutamine amidotransferase [Citrobacter
           sp. 30_2]
          Length = 525

 Score = 43.4 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 50/184 (27%), Gaps = 17/184 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS             +  +  D G    + L     V     +    
Sbjct: 227 NDKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAQQVMDMFGDHFGL 283

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +  +    L  L   +     + +  ++         +   ++ +L          
Sbjct: 284 NIVHVEGEKRF-LDALKGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGTIY---- 338

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                       + +     +   I++      L  E  + +  PL  L K E  K+  +
Sbjct: 339 --------PDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLRELFKDEVRKIGLE 390

Query: 187 IGGQ 190
           +G  
Sbjct: 391 LGLP 394


>gi|168177461|ref|ZP_02612125.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
 gi|226947352|ref|YP_002802443.1| hypothetical protein CLM_0172 [Clostridium botulinum A2 str.
          Kyoto]
 gi|182671002|gb|EDT82976.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
 gi|226844468|gb|ACO87134.1| conserved hypothetical protein [Clostridium botulinum A2 str.
          Kyoto]
          Length = 326

 Score = 43.4 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 24/65 (36%), Gaps = 4/65 (6%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           AL + SGG DS+       D+   V  + F    R+    E       K +++  +  D
Sbjct: 3  RALAMISGGLDSTLAAKLIKDQGIEVIGICF----RSYFFNEKNAERMTKQIDIPLEVVD 58

Query: 70 SLGED 74
             E 
Sbjct: 59 FSKEH 63


>gi|167767535|ref|ZP_02439588.1| hypothetical protein CLOSS21_02054 [Clostridium sp. SS2/1]
 gi|167710827|gb|EDS21406.1| hypothetical protein CLOSS21_02054 [Clostridium sp. SS2/1]
          Length = 515

 Score = 43.4 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 44/185 (23%), Gaps = 16/185 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS            ++  +  D+G   K E +    V            
Sbjct: 218 KVLLALSGGVDSSVAAGLLSRAIGKQLTCVFVDHGLLRKDEGDEVEGV------------ 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              GE+    L  +   +       +     +       +    I      A     +  
Sbjct: 266 --FGENGQFDLNFIRVNAQQRYYDKLKGVT-EPEAKRKIIGEEFIRIFEEEAKKIGAVDF 322

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                   +   SG                         +  PL  L K E  +    +G
Sbjct: 323 LAQGTIYPDVVESGLGGESAVIKSHHNVGGLPDFVDFKEIIEPLRDLFKDEVRQAGLQLG 382

Query: 189 GQDLV 193
             + +
Sbjct: 383 IPERL 387


>gi|218531106|ref|YP_002421922.1| GMP synthase [Methylobacterium chloromethanicum CM4]
 gi|218523409|gb|ACK83994.1| GMP synthase, large subunit [Methylobacterium chloromethanicum CM4]
          Length = 521

 Score = 43.4 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 54/185 (29%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS       +   D++  +  D+G     E +  + + +        
Sbjct: 223 KEKVICGLSGGVDSSVAAVLIHEAIGDQLTCVFVDHGLMRLGEGDEVVRLFR-------- 274

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + + +PL  +                +        +              A  L
Sbjct: 275 ------DHYNIPLIHVQAQDLFIGALEGVDDPEVKRKTIGRLFIDVFEAEAGKIGGAAFL 328

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+    +      TI++      L    ++ +  PL  L K E   L ++
Sbjct: 329 AQGTLYPDVIESV--SFSGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRLLGKE 386

Query: 187 IGGQD 191
           +G  +
Sbjct: 387 LGLPE 391


>gi|126658620|ref|ZP_01729766.1| asparagine synthetase B [Cyanothece sp. CCY0110]
 gi|126620057|gb|EAZ90780.1| asparagine synthetase B [Cyanothece sp. CCY0110]
          Length = 499

 Score = 43.4 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 20/53 (37%), Gaps = 2/53 (3%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            SGG DSS   + A      +   +F  G     +++    V   +  +  ++
Sbjct: 226 LSGGLDSSIIAAIAKKHKSELH--TFSVGVEGSKDIKAARFVSDYLGTIHHEY 276


>gi|171085|gb|AAA34437.1| argininosuccinate synthetase (ARG1; E.C. 6.8.4.5) [Saccharomyces
          cerevisiae]
          Length = 420

 Score = 43.4 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 6/78 (7%)

Query: 5  IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
          + K    + L +SGG D+S  L+W LD+   V     + GQ  + + +    +  KI   
Sbjct: 1  MSKGK--VCLAYSGGLDTSVILAWLLDQATEVVAFMANVGQ--EEDFDAAKVLALKIGA- 55

Query: 64 MPKWKDSLGEDHILPLAI 81
                 L ED +  +  
Sbjct: 56 CKFVCGGLSEDFVKDILF 73


>gi|47570187|ref|ZP_00240841.1| cell cycle protein mesJ [Bacillus cereus G9241]
 gi|47553131|gb|EAL11528.1| cell cycle protein mesJ [Bacillus cereus G9241]
          Length = 476

 Score = 43.4 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 25/198 (12%), Positives = 52/198 (26%), Gaps = 25/198 (12%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSW-----ALDRFDRVETLSFDYGQRNKVELECRLCV 56
            D++K+  + ++  SGG DS   L +     A  +F+ V     D    +    +     
Sbjct: 16  YDVLKERSTIVVGVSGGPDSLALLYYLLEKRAAKQFEIVVA-HVD----HMFRGDESHED 70

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
            + + +L            I           ++       +             R  + L
Sbjct: 71  LQFVQDLCKGLGVICETIRINVSQYQQQYGMNAQVAARECRYVFLERIMKKYDAR-YVAL 129

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
                      +  +V G     Y+G    R                    +  PL+ + 
Sbjct: 130 GHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNG--------------YLIRPLLGVT 175

Query: 177 KYETWKLAQDIGGQDLVN 194
           K E       +     ++
Sbjct: 176 KEEIVDYCNKLKIIPRID 193


>gi|299143875|ref|ZP_07036955.1| GMP synthase [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298518360|gb|EFI42099.1| GMP synthase [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 505

 Score = 43.4 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 19/50 (38%), Gaps = 1/50 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
             LL  SGG DSS   +        ++  +  D+G   K E +      K
Sbjct: 212 KVLLALSGGVDSSVTAALLSKAVGSKLTCIFVDHGLMRKNEGDEVEAAFK 261


>gi|229170914|ref|ZP_04298517.1| tRNA(Ile)-lysidine synthase [Bacillus cereus MM3]
 gi|228612580|gb|EEK69799.1| tRNA(Ile)-lysidine synthase [Bacillus cereus MM3]
          Length = 480

 Score = 43.4 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 52/197 (26%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSW-----ALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           D++K+  + ++  SGG DS   L +     A  +F+ V     D    +    +      
Sbjct: 21  DVLKERSTIVVGVSGGPDSLALLYYLLEKRAAKQFEIVVA-HVD----HMFRGDESHEDL 75

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           + + +L            I           ++       +             R  + L 
Sbjct: 76  QFVQDLCRGLGVICETIRINVSQYQQQHGMNAQVAARECRYAFLERIMKKYDAR-YVALG 134

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                     +  +V G     Y+G    R                    +  PL+ + K
Sbjct: 135 HHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNG--------------YLIRPLLGVTK 180

Query: 178 YETWKLAQDIGGQDLVN 194
            E       +     ++
Sbjct: 181 EEIVDYCNKLKIIPRID 197


>gi|146338275|ref|YP_001203323.1| tRNA(Ile)-lysidine synthase [Bradyrhizobium sp. ORS278]
 gi|146191081|emb|CAL75086.1| tRNA(Ile)-lysidine synthase [Bradyrhizobium sp. ORS278]
          Length = 367

 Score = 43.4 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 9/68 (13%)

Query: 11  ALLL-FSGGQDSSTCLSW------ALDRFDRVETLSFDYGQRNKVELECR--LCVRKKIV 61
           AL+L  SGG DS   L        AL    R+  ++ D+G R +   E        +++ 
Sbjct: 35  ALVLAVSGGPDSMALLWLAARWRQALADGPRLVAITVDHGLRPEARREAAMVKRFARQLE 94

Query: 62  ELMPKWKD 69
                 + 
Sbjct: 95  VSHRMLRW 102


>gi|126435560|ref|YP_001071251.1| argininosuccinate synthase [Mycobacterium sp. JLS]
 gi|166220993|sp|A3Q0T3|ASSY_MYCSJ RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|126235360|gb|ABN98760.1| argininosuccinate synthase [Mycobacterium sp. JLS]
          Length = 400

 Score = 43.4 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           +   +L +SGG D S        +    V  ++ D GQ  +     R     
Sbjct: 1  MSERVILAYSGGLDTSVAISWIGKETGREVVAVAIDLGQGGEDMDVVRQRALD 53


>gi|108799932|ref|YP_640129.1| argininosuccinate synthase [Mycobacterium sp. MCS]
 gi|119869042|ref|YP_938994.1| argininosuccinate synthase [Mycobacterium sp. KMS]
 gi|119361294|sp|Q1B7R1|ASSY_MYCSS RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|166220994|sp|A1UH96|ASSY_MYCSK RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|108770351|gb|ABG09073.1| Argininosuccinate synthase [Mycobacterium sp. MCS]
 gi|119695131|gb|ABL92204.1| argininosuccinate synthase [Mycobacterium sp. KMS]
          Length = 400

 Score = 43.4 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           +   +L +SGG D S        +    V  ++ D GQ  +     R     
Sbjct: 1  MSERVILAYSGGLDTSVAISWIGKETGREVVAVAIDLGQGGEDMDVVRQRALD 53


>gi|15838041|ref|NP_298729.1| tRNA-specific 2-thiouridylase MnmA [Xylella fastidiosa 9a5c]
 gi|14195287|sp|Q9PDD9|MNMA_XYLFA RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|9106458|gb|AAF84249.1|AE003974_4 tRNA methyltransferase [Xylella fastidiosa 9a5c]
          Length = 379

 Score = 43.4 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 47/189 (24%), Gaps = 11/189 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             P  ++  SGG DSS        + + +  L       +          R+  V +   
Sbjct: 2   NTPRIIVAMSGGVDSSVAAWRLNSQRETIAGLFMRNWTDDGNGQCHAEEDRRDAVAVCGI 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   H    +   +      T  +A            +  R  I        A  L
Sbjct: 62  LG---IAFHFRDFS--HEYWQEVFTHFLAEYANGRTPNPDVLCNRE-IKFKHFLETAREL 115

Query: 127 GITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           G  +I  G                    +         LG E       P+  L+K +  
Sbjct: 116 GADSIATGHYARIKHYRQRWHLLRGADRSKDQSYFLHQLGQEQLAATMFPIGDLEKPQLR 175

Query: 182 KLAQDIGGQ 190
           +LA   G  
Sbjct: 176 QLAHQAGLP 184


>gi|306836931|ref|ZP_07469883.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
          [Corynebacterium accolens ATCC 49726]
 gi|304567186|gb|EFM42799.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
          [Corynebacterium accolens ATCC 49726]
          Length = 345

 Score = 43.4 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 22/62 (35%), Gaps = 2/62 (3%)

Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYG--QRNKVELECRLCVRKKIVELMPKWKDSLG 72
           SGG DS    +  +     V  L  D+G    ++ + E      + +       +  + 
Sbjct: 38 LSGGADSLALCAAMIAEGHDVIALCVDHGLQDGSREQAERAARQAESLGARARVLEVQVP 97

Query: 73 ED 74
          E+
Sbjct: 98 EE 99


>gi|304313975|ref|YP_003849122.1| tRNA methyltransferase subunit [Methanothermobacter marburgensis
           str. Marburg]
 gi|302587434|gb|ADL57809.1| predicted tRNA methyltransferase subunit [Methanothermobacter
           marburgensis str. Marburg]
          Length = 200

 Score = 43.4 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 4/116 (3%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG----QRNKVELECRLCVRKKIVELMPK 66
           A +L+SGG+DSS           + E ++ ++G     R        L  + +++EL   
Sbjct: 3   ACVLYSGGKDSSLMAVMLQRMGIQAELVTVNFGVYDSWRPASMAADALGFKHRVLELSGD 62

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                 E  I        I H   +   A  ++ + + +          L      
Sbjct: 63  VLREATEMIINDGFPNNGIMHIHRSAVEAAAVEYDLVADGTRRDDRTPKLTRNEIQ 118


>gi|167571198|ref|ZP_02364072.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Burkholderia oklahomensis C6786]
          Length = 400

 Score = 43.4 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 28/124 (22%), Gaps = 5/124 (4%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS       ++   V  L     + +     C         + +     +    
Sbjct: 1   MSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQ-----DWIDVVSVADLIG 55

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
             +            +      +      PN  V     I        A  LG   I  G
Sbjct: 56  IDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLGARTIATG 115

Query: 135 VCET 138
               
Sbjct: 116 HYAR 119


>gi|118104747|ref|XP_422953.2| PREDICTED: hypothetical protein, partial [Gallus gallus]
          Length = 122

 Score = 43.4 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
          + +   + +L +SGG D+S  L W  ++   V       GQ    + +        +   
Sbjct: 1  MAEPRDTVVLAYSGGLDTSCILVWLKEQGYTVIAFLAKIGQ--TEDFDAAQKKALALGAK 58

Query: 64 MPKWKD 69
              +D
Sbjct: 59 KVYIQD 64


>gi|329118757|ref|ZP_08247455.1| argininosuccinate synthase [Neisseria bacilliformis ATCC
          BAA-1200]
 gi|327465104|gb|EGF11391.1| argininosuccinate synthase [Neisseria bacilliformis ATCC
          BAA-1200]
          Length = 445

 Score = 43.4 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 18 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYDTIPRKAMEYGAQNARLID 74


>gi|319404346|emb|CBI77943.1| NH3-dependent NAD synthetase [Bartonella rochalimae ATCC BAA-1498]
          Length = 558

 Score = 43.4 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 46/150 (30%), Gaps = 3/150 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
            +    LL FSGG DS+ C + A+D    +RV  +   Y   ++  L+        +   
Sbjct: 288 NRFKDVLLGFSGGIDSALCAAIAVDALGAERVHAVMMPYYYTSQESLKDAKDCAHLLGCR 347

Query: 64  MPKWKDS-LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                   L E  +  +A +     + +T+         ++        + + +      
Sbjct: 348 YEIIPIFKLVESFLSIMAPIFSGLKADVTEENLQSRVRGSILMALSNKFDSMVITTGNKS 407

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIR 152
              +G   +   +           +    +
Sbjct: 408 EMAVGYATLYGDMNGGFNPIKDIYKTQVYK 437


>gi|297624482|ref|YP_003705916.1| GMP synthase large subunit [Truepera radiovictrix DSM 17093]
 gi|297165662|gb|ADI15373.1| GMP synthase, large subunit [Truepera radiovictrix DSM 17093]
          Length = 525

 Score = 43.4 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 54/186 (29%), Gaps = 16/186 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSST          +R+  +  D+G     E E      + +   +   
Sbjct: 227 ERVLLAISGGVDSSTLGLLLNRAIGERLTAVFVDHGLLRAGEAEEVERALRGVGVNLTVV 286

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +           LG ++  +  +     I    +       R+    V       +  
Sbjct: 287 DAA--------ERFLGALTGVADPEEKRKIIGREFIEVFNGVVRDKQAEVGHIRFLAQGT 338

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +   VI       +         I++      L  +    +  P   L K E  +LA  +
Sbjct: 339 LYPDVIESSGGHGAAN-------IKSHHNVGGLPEDLRFELLEPFRTLFKDEVRELATLL 391

Query: 188 GGQDLV 193
           G    +
Sbjct: 392 GLPPHL 397


>gi|229817944|ref|ZP_04448226.1| hypothetical protein BIFANG_03231 [Bifidobacterium angulatum DSM
          20098]
 gi|229784548|gb|EEP20662.1| hypothetical protein BIFANG_03231 [Bifidobacterium angulatum DSM
          20098]
          Length = 412

 Score = 43.4 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCV 56
          +      +L +SGG D+S  +S+  +R    V  +S D GQ  +     +   
Sbjct: 1  MADKNRLVLAYSGGLDTSVAISYLKERTGKDVVAVSLDVGQGGESLETIKERA 53


>gi|49473838|ref|YP_031880.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Bartonella quintana str. Toulouse]
 gi|81647394|sp|Q6G197|GUAA_BARQU RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|49239341|emb|CAF25674.1| GMP synthase [Bartonella quintana str. Toulouse]
          Length = 518

 Score = 43.4 bits (100), Expect = 0.026,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 51/185 (27%), Gaps = 18/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS       +   D++  +  D+G   K E      V K   +    
Sbjct: 221 KSRVICGLSGGVDSSVVAVLLHEAIGDQLTCILVDHGLMRKNE---AEEVLKLFRD---- 273

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   + + L  +   +            +        +                 L
Sbjct: 274 -------HYNIELIHVNAANIFLNALEGETDPEKKRKTIGRLFIEVFEEETKKIEGVEFL 326

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+  +         I++      L    ++ +  PL  L K E   L ++
Sbjct: 327 AQGTLYPDVIESVSAIGESVT---IKSHHNVGGLPERMNMKLVEPLRELFKDEVRSLGRE 383

Query: 187 IGGQD 191
           +G  +
Sbjct: 384 LGLPE 388


>gi|325299729|ref|YP_004259646.1| tRNA(Ile)-lysidine synthase [Bacteroides salanitronis DSM 18170]
 gi|324319282|gb|ADY37173.1| tRNA(Ile)-lysidine synthase [Bacteroides salanitronis DSM 18170]
          Length = 430

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 17/54 (31%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
          ++  K    ++  SGG DS   L   L           ++  R K        V
Sbjct: 14 ELFTKDDKIVVALSGGADSVALLRVLLQGGYTCVAAHCNFHLRGKESDRDAAFV 67


>gi|257453148|ref|ZP_05618447.1| NAD synthetase [Fusobacterium sp. 3_1_5R]
 gi|317059683|ref|ZP_07924168.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium sp. 3_1_5R]
 gi|313685359|gb|EFS22194.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium sp. 3_1_5R]
          Length = 259

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 21/55 (38%), Gaps = 2/55 (3%)

Query: 9  PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
             +L  SGG DS+     A+     + V  +   Y   ++  +E    V K + 
Sbjct: 22 KKVILGLSGGIDSALVAYLAVKALGKENVIAIKMPYKTSSQESIEHANLVLKDLG 76


>gi|268316244|ref|YP_003289963.1| GMP synthase, large subunit [Rhodothermus marinus DSM 4252]
 gi|262333778|gb|ACY47575.1| GMP synthase, large subunit [Rhodothermus marinus DSM 4252]
          Length = 522

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 53/184 (28%), Gaps = 14/184 (7%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS           DR+  +  D G   K E        + +      +  
Sbjct: 223 VILGLSGGVDSSVAAVLLHRALGDRLTCIFVDNGLLRKGE------AAQVVATFRDHF-- 274

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                  L     G +  S L   V  + +   +  TF+             L  R    
Sbjct: 275 ----HIRLKAVDAGALFLSRLEGVVDPEQKRKIIGATFIEVFEQATEELTRELGRRPRFL 330

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                  +   S        TI+       L  + +  +  P   L K E   + + +  
Sbjct: 331 AQGTLYPDVIESVSFRGPSATIKTHHNVGGLPEKLNFEIIEPFRELFKDEVRAIGRLLQV 390

Query: 190 QDLV 193
            +++
Sbjct: 391 PEVI 394


>gi|237742539|ref|ZP_04573020.1| bifunctional GMP synthase/glutamine amidotransferase [Fusobacterium
           sp. 4_1_13]
 gi|229430187|gb|EEO40399.1| bifunctional GMP synthase/glutamine amidotransferase [Fusobacterium
           sp. 4_1_13]
          Length = 512

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 58/187 (31%), Gaps = 18/187 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +        ++  +  D G   K E        K+++E+  K
Sbjct: 215 NKQVILGLSGGVDSSVAAALINKAIGKQLTCIFVDTGLLRKDE-------AKQVMEVYAK 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D   +        L  ++  +  +     I    +                   A  L
Sbjct: 268 NFDMNIKCINAEERFLTKLAGVTDPETKRKIIGKEFVE-------VFNEEAKKIEGAEFL 320

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+     P      I++      L  +    +  PL  L K E  K+ ++
Sbjct: 321 AQGTIYPDVIESVSVKGPSVT---IKSHHNVGGLPEDLKFELLEPLRELFKDEVRKVGRE 377

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 378 LGIPDYM 384


>gi|226328661|ref|ZP_03804179.1| hypothetical protein PROPEN_02556 [Proteus penneri ATCC 35198]
 gi|225203394|gb|EEG85748.1| hypothetical protein PROPEN_02556 [Proteus penneri ATCC 35198]
          Length = 302

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 55/176 (31%), Gaps = 13/176 (7%)

Query: 12  LLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++L+S G+DSS  L  A   F         L  D G + +   E R    K+    +  +
Sbjct: 31  VMLYSIGKDSSVMLHLARKAFYPAKLPFPLLHVDTGWKFREMYEFRDKTAKEYGFDLKVY 90

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           ++  GE+  +   I G   H+ + K   +K   +        G                 
Sbjct: 91  RNPQGEELGINPFIHGSAKHTDIMKTEGLKQALDKYGFDAAFGGARRD------EEKSRA 144

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              I             + R +  +     IN G    V    PL    + + W+ 
Sbjct: 145 KERIYSFRDRKHRWDPKNQRPELWKNYNGQINKGESIRV---FPLSNWTELDIWQY 197


>gi|255564579|ref|XP_002523285.1| GMP synthase, putative [Ricinus communis]
 gi|223537498|gb|EEF39124.1| GMP synthase, putative [Ricinus communis]
          Length = 534

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 19/50 (38%), Gaps = 1/50 (2%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
            +   SGG DS+   +       DR+  +  D G     E E  +   ++
Sbjct: 230 VICALSGGVDSTVAATLVHKAIGDRLHCVFVDNGLLRYRERERVMEAFER 279


>gi|217968167|ref|YP_002353673.1| Argininosuccinate synthase [Dictyoglomus turgidum DSM 6724]
 gi|254807521|sp|B8E0N9|ASSY_DICTD RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|217337266|gb|ACK43059.1| Argininosuccinate synthase [Dictyoglomus turgidum DSM 6724]
          Length = 397

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQ 44
          +    +L +SGG D+S  + W + ++   V TL+ D GQ
Sbjct: 2  EREKVVLAYSGGLDTSVAIKWLMQKYSLDVITLTVDIGQ 40


>gi|152994771|ref|YP_001339606.1| thiamine biosynthesis protein ThiI [Marinomonas sp. MWYL1]
 gi|150835695|gb|ABR69671.1| thiamine biosynthesis/tRNA modification protein ThiI [Marinomonas
           sp. MWYL1]
          Length = 483

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 49/187 (26%), Gaps = 29/187 (15%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMP 65
             S L L SGG DS+      + R  +     F+ G         +    + +K      
Sbjct: 177 QDSVLSLMSGGYDSTVSSFLTMSRGLKTHFCFFNLGGDAHEIGVKQVSNFIWEKYG---- 232

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                         + L     +   + V  +I               + L  A+ L   
Sbjct: 233 --------------SALNVKFITVPFEAVVGEILTKVDNAEMGVILKRMMLRAASQLMTE 278

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G   +V G      S         I  +   +         V  PL+   K      A 
Sbjct: 279 VGAKALVTGESVAQVSSQTLMNLKVIDQVTEEL---------VLRPLITTNKQVIINKAI 329

Query: 186 DIGGQDL 192
           +IG    
Sbjct: 330 EIGTAPF 336


>gi|313638402|gb|EFS03604.1| GMP synthase (glutamine-hydrolyzing) [Listeria seeligeri FSL
           S4-171]
          Length = 414

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 52/186 (27%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V + +       
Sbjct: 220 KKVLLALSGGVDSSVVGVLIHKAIGDQLTCIFVDHGLLRKGE---ADQVMETLQGEFNMN 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G                        + G   I++          G
Sbjct: 277 IIKVDAKKRFMDKLAG---------------VSEPEQKRKIIGNEFIYVFDDEA-NKLDG 320

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 321 VEFLAQGTLYTDIIESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGTEL 380

Query: 188 GGQDLV 193
           G  D +
Sbjct: 381 GMPDAI 386


>gi|296106371|ref|YP_003618071.1| cell cycle protein MesJ [Legionella pneumophila 2300/99 Alcoy]
 gi|295648272|gb|ADG24119.1| cell cycle protein MesJ [Legionella pneumophila 2300/99 Alcoy]
          Length = 433

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 11/53 (20%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR---FDRVETLSFDYG--------QRN 46
          +K+    ++ FSGG DS+  L          +++  +  ++G        QR+
Sbjct: 16 LKQFKKLIVGFSGGLDSTVLLHVLASTPPLSNQLLAVHINHGISGNSLNWQRH 68


>gi|148360562|ref|YP_001251769.1| cell cycle protein MesJ [Legionella pneumophila str. Corby]
 gi|148282335|gb|ABQ56423.1| cell cycle protein MesJ [Legionella pneumophila str. Corby]
          Length = 431

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 11/53 (20%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR---FDRVETLSFDYG--------QRN 46
          +K+    ++ FSGG DS+  L          +++  +  ++G        QR+
Sbjct: 14 LKQFKKLIVGFSGGLDSTVLLHVLASTPPLSNQLLAVHINHGISGNSLNWQRH 66


>gi|48477634|ref|YP_023340.1| hypothetical protein PTO0562 [Picrophilus torridus DSM 9790]
 gi|48430282|gb|AAT43147.1| hypothetical protein PTO0562 [Picrophilus torridus DSM 9790]
          Length = 470

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 16/223 (7%), Positives = 50/223 (22%), Gaps = 12/223 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                 ++ SGG++S        +         F+    + +  +       +  + + K
Sbjct: 149 NKNRVAIMSSGGKESLLGYGILNEIGAETYAFYFEESGSHWLTAKTAYDYYSRHFKNVFK 208

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              ++   +      L  I  S +            +   ++               Y +
Sbjct: 209 IWSNVDRFYKFMNLKLKIIDKSKINIRADDYPIQVFIFPVYIFSMIPFM------KKYGI 262

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   +     +                 +  ++          +    +  Y        
Sbjct: 263 GNIVMGDEFDDPREMKLFHGMKYYYGIFDQTVDFNDMMTDYFKSTGKDIDVYSIVYPITG 322

Query: 187 IGGQDLVNLILEE----SHTCYLGKRDKRYEWGYGCNSCPACY 225
              + ++     +      +C+      +      C  C  C 
Sbjct: 323 SLEEKILMERYHDLFLNQRSCHS--CHIKDGRILPCGKCTKCL 363


>gi|18978317|ref|NP_579674.1| n-type ATP pyrophosphatase superfamily protein [Pyrococcus
          furiosus DSM 3638]
 gi|18894145|gb|AAL82069.1| n-type ATP pyrophosphatase superfamily [Pyrococcus furiosus DSM
          3638]
          Length = 204

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
          LFSGG+DSS            V+ ++  +G       +      + +       +  +G
Sbjct: 13 LFSGGKDSSLAAWILKKLGYEVKLITITFG--VLDNWKFARETAEILGFDHEVIEMPIG 69


>gi|54296810|ref|YP_123179.1| hypothetical protein lpp0850 [Legionella pneumophila str. Paris]
 gi|61216438|sp|Q5X6W4|TILS_LEGPA RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
          Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
          Full=tRNA(Ile)-lysidine synthetase
 gi|53750595|emb|CAH12000.1| hypothetical protein lpp0850 [Legionella pneumophila str. Paris]
          Length = 431

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 11/53 (20%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR---FDRVETLSFDYG--------QRN 46
          +K+    ++ FSGG DS+  L          +++  +  ++G        QR+
Sbjct: 14 LKQFKKLIVGFSGGLDSTVLLHVLASTPPLSNQLLAVHINHGISGNSLNWQRH 66


>gi|52841023|ref|YP_094822.1| cell cycle protein MesJ [Legionella pneumophila subsp.
          pneumophila str. Philadelphia 1]
 gi|61216449|sp|Q5ZXE5|TILS_LEGPH RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
          Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
          Full=tRNA(Ile)-lysidine synthetase
 gi|52628134|gb|AAU26875.1| cell cycle protein MesJ [Legionella pneumophila subsp.
          pneumophila str. Philadelphia 1]
          Length = 433

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 11/53 (20%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR---FDRVETLSFDYG--------QRN 46
          +K+    ++ FSGG DS+  L          +++  +  ++G        QR+
Sbjct: 16 LKQFKKLIVGFSGGLDSTVLLHVLASTPPLSNQLLAVHINHGISGNSLNWQRH 68


>gi|124266815|ref|YP_001020819.1| GMP synthase [Methylibium petroleiphilum PM1]
 gi|226739641|sp|A2SG95|GUAA_METPP RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|124259590|gb|ABM94584.1| GMP synthase (glutamine-hydrolyzing) [Methylibium petroleiphilum
           PM1]
          Length = 534

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 60/186 (32%), Gaps = 19/186 (10%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       DR+  +  D+G               ++ E     + 
Sbjct: 225 VILGLSGGVDSSVAAALIHRAIGDRLTCVFVDHG-------------LLRLNEGDMVMEM 271

Query: 70  SLGEDH-ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             G+ H  +      ++  + L      + +   +   FV           A+ A   G 
Sbjct: 272 FAGKLHAKVVRVDAAELFMNELAGVADPEAKRKIIGRLFVDVFKAEAAKLKASGAGHRGA 331

Query: 129 TNIVI---GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           T +          +  G    +  TI++      L  +  + +  PL  L K E  +L  
Sbjct: 332 TFLAQGTIYPDVIESGGAKTKKATTIKSHHNVGGLPEQLGLKLLEPLRDLFKDEVRELGV 391

Query: 186 DIGGQD 191
            +G   
Sbjct: 392 ALGLPH 397


>gi|326529305|dbj|BAK01046.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 491

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 33/134 (24%), Gaps = 2/134 (1%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS  L                   +         C     ++      D
Sbjct: 76  RVAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFRNFWSECPWDDDLKYAQAVCD 135

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +     +    L D   + +  ++  + ++   PN  V     I           LG  
Sbjct: 136 KIDVPLEVV--HLSDEYWNHVVSHMISEYRNGRTPNPDVLCNTRIKFGAFLEAIENLGFD 193

Query: 130 NIVIGVCETDYSGY 143
            I  G         
Sbjct: 194 YIASGHYAHVVHPP 207


>gi|323702327|ref|ZP_08113992.1| PP-loop domain protein [Desulfotomaculum nigrificans DSM 574]
 gi|323532633|gb|EGB22507.1| PP-loop domain protein [Desulfotomaculum nigrificans DSM 574]
          Length = 270

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 59/212 (27%), Gaps = 44/212 (20%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKK 59
           + + I+   S L+ FSGG DS+  L    +    R   ++         E+E    + K+
Sbjct: 11  LREKIRGYGSVLIAFSGGVDSTLLLKILAEELPSRTLAVTAISDTFTLEEIERAQKLAKE 70

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +            E  ++    + D    S                        I     
Sbjct: 71  LG----------VEHLLIESTEMTDQRFVSNPPE-------------RCYYCKHIRFSKL 107

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
             +A   GI NIV G    D + +                      V      + L K E
Sbjct: 108 KEIARDRGIENIVDGSNIDDLADFRPGTKAVEE-----------LGVKSPLQEVGLSKAE 156

Query: 180 TWKLAQDIG---------GQDLVNLILEESHT 202
             +L++ +G               +   E+ T
Sbjct: 157 VRELSRRLGLPTWNVPAVACLASRIPYGETIT 188


>gi|315649809|ref|ZP_07902892.1| argininosuccinate synthase [Paenibacillus vortex V453]
 gi|315274783|gb|EFU38164.1| argininosuccinate synthase [Paenibacillus vortex V453]
          Length = 410

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVR 57
              +L +SGG D+S  L W  + +D  +   + D GQ+ +++      + 
Sbjct: 3  KQKIVLAYSGGLDTSVILKWLKETYDAEIIAFTADIGQKEELDGLEEKALA 53


>gi|311895400|dbj|BAJ27808.1| putative sulfate adenylyltransferase subunit 2 [Kitasatospora setae
           KM-6054]
          Length = 312

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 47/201 (23%), Gaps = 21/201 (10%)

Query: 12  LLLFSGGQDSSTCLSWALDRF----DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++LFSGG+DS   L  AL  F         L  D G      L  R     K    +   
Sbjct: 43  VILFSGGKDSIVMLHLALKAFAPAPVPFALLHVDTGHNFPEVLAYRDRAVAKHNLRLHVA 102

Query: 68  KDSLGEDH----------------ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
                 D                 +  L  +      ++        +           R
Sbjct: 103 AVQDYIDRGVLRERPDGLRNPLQTVPLLDGIEAGKFDAVFGGGRRDEEKARAKERVFSLR 162

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
           +             L                +P      +   +     G+E     +  
Sbjct: 163 DEFGAWDPRRQRPELWSLYNGRHAAGEHVRVFPLSNWTELDVWQYIEREGIELPEIYYAH 222

Query: 172 LMWLKKYE-TWKLAQDIGGQD 191
              + K +  W  A + GG  
Sbjct: 223 RREVFKRDGMWLTAGEWGGPK 243


>gi|198283571|ref|YP_002219892.1| GMP synthase large subunit [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218666576|ref|YP_002426196.1| GMP synthase [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198248092|gb|ACH83685.1| GMP synthase, large subunit [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218518789|gb|ACK79375.1| GMP synthase [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 514

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 54/188 (28%), Gaps = 18/188 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DS+  +        D++  +  D G     E        +K+  +   
Sbjct: 217 KGRVIAALSGGVDSAVAVVLIHRAIGDQLTCIFVDNGLLRFGE-------AEKVATVFRN 269

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +        ++          + +T     +    NL                   A  L
Sbjct: 270 Y--FQIPLQVVDARQRFLDVLADVTDPEKKRKAIGNLFIEIFE-----EESKHLEGADFL 322

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E   S        TI++      L     + +  PL  L K E  +L ++
Sbjct: 323 AQGTLYPDVIE---SISFKGPSATIKSHHNVGGLPERMRLQLVEPLRELFKDEVRELGRE 379

Query: 187 IGGQDLVN 194
           +G  + V 
Sbjct: 380 LGMPEEVI 387


>gi|254167304|ref|ZP_04874156.1| hypothetical protein ABOONEI_2117 [Aciduliprofundum boonei T469]
 gi|197623567|gb|EDY36130.1| hypothetical protein ABOONEI_2117 [Aciduliprofundum boonei T469]
          Length = 288

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 31/254 (12%), Positives = 68/254 (26%), Gaps = 24/254 (9%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG-QRNKVELECRLCVRKK----- 59
           K      +  SGG+DS   L +  +R   +     + G   +  ++E  +    K     
Sbjct: 40  KPEGKIAIALSGGKDSMVLLHYFAERDYDIFGYFINLGIGEHSDKMEKLVRNACKEYGVE 99

Query: 60  --IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
             +  L  ++   +      P ++ G +    + K               +      F  
Sbjct: 100 LIVTNLREEYGFGIEGVRRKPCSVCGTVKRYLMNKVPRENGAKLVATGHNMDDFLDFFFK 159

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                 Y+     +            P  R   +   +        ++V   +    L K
Sbjct: 160 NTLAKNYQWNRNMVPYLPSTHP-KMLPKIRPLYLLGDKEIEMYAKLNNVPYSSDKCPLAK 218

Query: 178 YETWKLAQDIGGQDLVNLILEESHTCYL-----GKRDKRYEWGYGCNS------CPACYL 226
           +  WK           N   +   + +       +  +  +    C        C  C L
Sbjct: 219 FSGWKEIFYEIEGKKRNFRYQMILSIWDMADFFPEERRELQECKKCGEPTSGEICAFCKL 278

Query: 227 RQKGWMEFKEKYQD 240
           R +    +   Y++
Sbjct: 279 RDR----YGNPYKN 288


>gi|170757780|ref|YP_001779756.1| hypothetical protein CLD_0657 [Clostridium botulinum B1 str.
          Okra]
 gi|169122992|gb|ACA46828.1| conserved hypothetical protein [Clostridium botulinum B1 str.
          Okra]
          Length = 326

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 24/65 (36%), Gaps = 4/65 (6%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           AL + SGG DS+       D+   V  + F    R+    E       K +++  +  D
Sbjct: 3  RALAMISGGLDSTLAAKLIKDQGIEVIGICF----RSYFFNEKNAERMTKQIDIPLEVVD 58

Query: 70 SLGED 74
             E 
Sbjct: 59 FSKEH 63


>gi|186474280|ref|YP_001861622.1| argininosuccinate synthase [Burkholderia phymatum STM815]
 gi|226729173|sp|B2JP23|ASSY_BURP8 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|184196612|gb|ACC74576.1| Argininosuccinate synthase [Burkholderia phymatum STM815]
          Length = 444

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 24/67 (35%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + +       + FSGG D+S  L W   +       + + GQ ++ + +       +   
Sbjct: 6  ESLPTGQKVGIAFSGGLDTSAALHWMRLKGAVPYAYTANLGQPDEDDYDSIPRRATEYGA 65

Query: 63 LMPKWKD 69
             +  D
Sbjct: 66 EGARLID 72


>gi|332292810|ref|YP_004431419.1| argininosuccinate synthase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332170896|gb|AEE20151.1| argininosuccinate synthase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 393

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 18/55 (32%), Gaps = 1/55 (1%)

Query: 9  PSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
             +L +SGG D S     +  +    V  +S + G     E+         +  
Sbjct: 2  KKLILAYSGGLDTSYCVKYFTAEMGYEVHAVSVNTGGFTDQEIANNKEKALALGA 56


>gi|297624396|ref|YP_003705830.1| NAD+ synthetase [Truepera radiovictrix DSM 17093]
 gi|297165576|gb|ADI15287.1| NAD+ synthetase [Truepera radiovictrix DSM 17093]
          Length = 296

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 18/55 (32%), Gaps = 2/55 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIV 61
              ++  SGG DS+     A   F  + V  L   Y   +   L     V   + 
Sbjct: 54  DRVVVPLSGGIDSAVTAYLAARAFGPENVHALRLPYRASDPDSLAHAQLVVDALG 108


>gi|317154426|ref|YP_004122474.1| hypothetical protein Daes_2732 [Desulfovibrio aespoeensis Aspo-2]
 gi|316944677|gb|ADU63728.1| hypothetical protein Daes_2732 [Desulfovibrio aespoeensis Aspo-2]
          Length = 354

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 17/36 (47%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
          + +   AL L SGG DS   +   +D+   V  L F
Sbjct: 1  MNRKYDALALLSGGLDSILAMRTVMDQGLAVLGLHF 36


>gi|289192452|ref|YP_003458393.1| Thiamine biosynthesis protein-like protein [Methanocaldococcus sp.
           FS406-22]
 gi|288938902|gb|ADC69657.1| Thiamine biosynthesis protein-like protein [Methanocaldococcus sp.
           FS406-22]
          Length = 300

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 28/88 (31%), Gaps = 8/88 (9%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
             +I K    L+  SGG+D              +E    + G +   E        K + 
Sbjct: 42  YKMIDKDEKILVAVSGGKDGHAAAWVLKKLGYNIELFHINLGIKGFSEES-----LKAVN 96

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSS 89
           EL  K +      H++ L  +   +   
Sbjct: 97  ELAEKLE---VPLHVVNLKDITGKTMED 121


>gi|254724204|ref|ZP_05185989.1| cell cycle protein [Bacillus anthracis str. A1055]
          Length = 476

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 23/195 (11%), Positives = 54/195 (27%), Gaps = 21/195 (10%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D++K+  + ++  SGG DS   L + L++             R   + E  +     +  
Sbjct: 17  DVLKERSTIVVGVSGGPDSLALLYYLLEK-------------RAAKQFEIVVAHVDHMFR 63

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                 D   ED      +   +     T  + +                     F   +
Sbjct: 64  -----GDESHEDLQFVQGLCKGLGVICETIRINVSQYQKQYGMNAQVAARECRYAFLERI 118

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKKYE 179
             +     + +G    D       R       +    + ++       +  PL+ + K E
Sbjct: 119 MKKYDARYVALGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGYLIRPLLGVTKEE 178

Query: 180 TWKLAQDIGGQDLVN 194
                 ++     ++
Sbjct: 179 IVNYCNELKIIPRID 193


>gi|296158878|ref|ZP_06841706.1| GMP synthase, large subunit [Burkholderia sp. Ch1-1]
 gi|295890753|gb|EFG70543.1| GMP synthase, large subunit [Burkholderia sp. Ch1-1]
          Length = 527

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 56/181 (30%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D+G    + L     V     + +     
Sbjct: 225 VILGLSGGVDSSVAAALLHRAIGDQLTCVFVDHG---LLRLNEAEQVMATFADHLGVKVI 281

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +    +    + G     +  K +  +  +                    T A  L   
Sbjct: 282 HVDASEVFLRKLAGVTDPEAKRKIIGAEFVEVFQTE-----------AGKLTDAKWLAQG 330

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+   G       TI++      L    ++ +  PL  L K E  +L   +G 
Sbjct: 331 TIYPDVIESAGKGKK--ATQTIKSHHNVGGLPETLNLKLLEPLRELFKDEVRELGVKLGL 388

Query: 190 Q 190
            
Sbjct: 389 P 389


>gi|212638331|ref|YP_002314851.1| argininosuccinate synthase [Anoxybacillus flavithermus WK1]
 gi|226729219|sp|B7GGR4|ASSY_ANOFW RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|212559811|gb|ACJ32866.1| Argininosuccinate synthase [Anoxybacillus flavithermus WK1]
          Length = 402

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
           P  +L +SGG D+S  + W  ++   V     D G
Sbjct: 3  NPKVVLAYSGGLDTSVAIKWLQEQGYDVVACCLDVG 38


>gi|210631316|ref|ZP_03296859.1| hypothetical protein COLSTE_00744 [Collinsella stercoris DSM
          13279]
 gi|210160083|gb|EEA91054.1| hypothetical protein COLSTE_00744 [Collinsella stercoris DSM
          13279]
          Length = 445

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 8  APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
              +L +SGG D+S C+ W  +     V  +  + GQ +    +     ++
Sbjct: 13 KEKVVLAYSGGLDTSVCIKWLQNEMDLDVIAMLGNVGQEHDGLEKVAAKAKQ 64


>gi|190347632|gb|EDK39943.2| GMP synthase [Meyerozyma guilliermondii ATCC 6260]
          Length = 529

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 51/180 (28%), Gaps = 13/180 (7%)

Query: 15  FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
            SGG DS+       +   DR   +  D G   K E E          E+     + LG 
Sbjct: 234 VSGGVDSTVGAKIMKEAIGDRFHAIYVDNGVMRKNETE----------EVYKTLTEGLGI 283

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
           +  +      D+    L      + +   + NTF+                 +       
Sbjct: 284 NLTVV--DASDLFLGRLKGITDPEKKRKIIGNTFIHVFEEEAAKIKPAHGQEIEYLLQGT 341

Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
              +   S        TI+       L     + +  PL  L K E   L + +G    +
Sbjct: 342 LYPDVIESISFKGPSQTIKTHHNVGGLLDVMKLKLIEPLRELFKDEVRHLGELLGVPHDL 401


>gi|146414684|ref|XP_001483312.1| GMP synthase [Meyerozyma guilliermondii ATCC 6260]
          Length = 529

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 51/180 (28%), Gaps = 13/180 (7%)

Query: 15  FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
            SGG DS+       +   DR   +  D G   K E E          E+     + LG 
Sbjct: 234 VSGGVDSTVGAKIMKEAIGDRFHAIYVDNGVMRKNETE----------EVYKTLTEGLGI 283

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
           +  +      D+    L      + +   + NTF+                 +       
Sbjct: 284 NLTVV--DASDLFLGRLKGITDPEKKRKIIGNTFIHVFEEEAAKIKPAHGQEIEYLLQGT 341

Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
              +   S        TI+       L     + +  PL  L K E   L + +G    +
Sbjct: 342 LYPDVIESISFKGPSQTIKTHHNVGGLLDVMKLKLIEPLRELFKDEVRHLGELLGVPHDL 401


>gi|91784093|ref|YP_559299.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Burkholderia xenovorans LB400]
 gi|123168360|sp|Q13XE2|GUAA_BURXL RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|91688047|gb|ABE31247.1| GMP synthase (glutamine-hydrolyzing) [Burkholderia xenovorans
           LB400]
          Length = 527

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 56/181 (30%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D+G    + L     V     + +     
Sbjct: 225 VILGLSGGVDSSVAAALLHRAIGDQLTCVFVDHG---LLRLNEAEQVMATFADHLGVKVI 281

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +    +    + G     +  K +  +  +                    T A  L   
Sbjct: 282 HVDASEVFLRKLAGVTDPEAKRKIIGAEFVEVFQTE-----------AGKLTDAKWLAQG 330

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+   G       TI++      L    ++ +  PL  L K E  +L   +G 
Sbjct: 331 TIYPDVIESAGKGKK--ATQTIKSHHNVGGLPETLNLKLLEPLRELFKDEVRELGVKLGL 388

Query: 190 Q 190
            
Sbjct: 389 P 389


>gi|55980253|ref|YP_143550.1| argininosuccinate synthase [Thermus thermophilus HB8]
 gi|34921440|sp|P59846|ASSY_THET8 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|20150774|pdb|1KH1|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8
          Argininosuccinate Synthetase
 gi|20150775|pdb|1KH1|B Chain B, Crystal Structure Of Thermus Thermophilus Hb8
          Argininosuccinate Synthetase
 gi|20150776|pdb|1KH1|C Chain C, Crystal Structure Of Thermus Thermophilus Hb8
          Argininosuccinate Synthetase
 gi|20150777|pdb|1KH1|D Chain D, Crystal Structure Of Thermus Thermophilus Hb8
          Argininosuccinate Synthetase
 gi|20150778|pdb|1KH2|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8
          Argininosuccinate Synthetase In Complex With Atp
 gi|20150779|pdb|1KH2|B Chain B, Crystal Structure Of Thermus Thermophilus Hb8
          Argininosuccinate Synthetase In Complex With Atp
 gi|20150780|pdb|1KH2|C Chain C, Crystal Structure Of Thermus Thermophilus Hb8
          Argininosuccinate Synthetase In Complex With Atp
 gi|20150781|pdb|1KH2|D Chain D, Crystal Structure Of Thermus Thermophilus Hb8
          Argininosuccinate Synthetase In Complex With Atp
 gi|20150950|pdb|1KOR|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8
          Argininosuccinate Synthetase In Complex With Inhibitors
 gi|20150951|pdb|1KOR|B Chain B, Crystal Structure Of Thermus Thermophilus Hb8
          Argininosuccinate Synthetase In Complex With Inhibitors
 gi|20150952|pdb|1KOR|C Chain C, Crystal Structure Of Thermus Thermophilus Hb8
          Argininosuccinate Synthetase In Complex With Inhibitors
 gi|20150953|pdb|1KOR|D Chain D, Crystal Structure Of Thermus Thermophilus Hb8
          Argininosuccinate Synthetase In Complex With Inhibitors
 gi|30749317|pdb|1J1Z|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8
          Argininosuccinate Synthetase In Complex With Substrate
 gi|30749318|pdb|1J1Z|B Chain B, Crystal Structure Of Thermus Thermophilus Hb8
          Argininosuccinate Synthetase In Complex With Substrate
 gi|30749319|pdb|1J1Z|C Chain C, Crystal Structure Of Thermus Thermophilus Hb8
          Argininosuccinate Synthetase In Complex With Substrate
 gi|30749320|pdb|1J1Z|D Chain D, Crystal Structure Of Thermus Thermophilus Hb8
          Argininosuccinate Synthetase In Complex With Substrate
 gi|30749321|pdb|1J20|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8
          Argininosuccinate Synthetase In Complex With Product
 gi|30749322|pdb|1J20|B Chain B, Crystal Structure Of Thermus Thermophilus Hb8
          Argininosuccinate Synthetase In Complex With Product
 gi|30749323|pdb|1J20|C Chain C, Crystal Structure Of Thermus Thermophilus Hb8
          Argininosuccinate Synthetase In Complex With Product
 gi|30749324|pdb|1J20|D Chain D, Crystal Structure Of Thermus Thermophilus Hb8
          Argininosuccinate Synthetase In Complex With Product
 gi|30749325|pdb|1J21|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8
          Argininosuccinate Synthetase In Complex With Atp And
          Citrulline
 gi|30749326|pdb|1J21|B Chain B, Crystal Structure Of Thermus Thermophilus Hb8
          Argininosuccinate Synthetase In Complex With Atp And
          Citrulline
 gi|30749327|pdb|1J21|C Chain C, Crystal Structure Of Thermus Thermophilus Hb8
          Argininosuccinate Synthetase In Complex With Atp And
          Citrulline
 gi|30749328|pdb|1J21|D Chain D, Crystal Structure Of Thermus Thermophilus Hb8
          Argininosuccinate Synthetase In Complex With Atp And
          Citrulline
 gi|30749369|pdb|1KH3|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8
          Argininosuccinate Synthetase In Complex With Inhibitor
 gi|30749370|pdb|1KH3|B Chain B, Crystal Structure Of Thermus Thermophilus Hb8
          Argininosuccinate Synthetase In Complex With Inhibitor
 gi|30749371|pdb|1KH3|C Chain C, Crystal Structure Of Thermus Thermophilus Hb8
          Argininosuccinate Synthetase In Complex With Inhibitor
 gi|30749372|pdb|1KH3|D Chain D, Crystal Structure Of Thermus Thermophilus Hb8
          Argininosuccinate Synthetase In Complex With Inhibitor
 gi|55771666|dbj|BAD70107.1| argininosuccinate synthetase [Thermus thermophilus HB8]
          Length = 400

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 2/80 (2%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKI-VELMPKW 67
            +L +SGG D+S  L W  + +   V   + D GQ  +VE      +R      +    
Sbjct: 2  KIVLAYSGGLDTSIILKWLKETYRAEVIAFTADIGQGEEVEEAREKALRTGASKAIALDL 61

Query: 68 KDSLGEDHILPLAILGDISH 87
          K+    D + P+   G +  
Sbjct: 62 KEEFVRDFVFPMMRAGAVYE 81


>gi|71897609|ref|ZP_00679854.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Xylella fastidiosa Ann-1]
 gi|71732512|gb|EAO34565.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Xylella fastidiosa Ann-1]
          Length = 379

 Score = 43.4 bits (100), Expect = 0.027,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 47/189 (24%), Gaps = 11/189 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             P  ++  SGG DSS        + + +  L       +          R+  V +   
Sbjct: 2   NTPRIIVAMSGGVDSSVAAWRLNSQREAIAGLFMRNWTDDGNGQCHAEEDRRDAVAVCGI 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   H    +   +      T  +A            +  R  I        A  L
Sbjct: 62  LG---IAFHFRDFS--HEYWQEVFTHFLAEYANGRTPNPDVLCNRE-IKFKHFLETAREL 115

Query: 127 GITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           G   I  G            R       +         LG E       P+  L+K +  
Sbjct: 116 GADRIATGHYARIEHYRQRWRLLRGADRSKDQSYFLHQLGQEQLAATLFPIGDLEKQQLR 175

Query: 182 KLAQDIGGQ 190
           +LA   G  
Sbjct: 176 QLAHQTGLP 184


>gi|301168417|emb|CBW28007.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
          Length = 284

 Score = 43.4 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 22/177 (12%), Positives = 50/177 (28%), Gaps = 7/177 (3%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  +  S  +LFSGG DS+   +   + F+++  ++++    ++ +             L
Sbjct: 1   MNPQGESVAILFSGGTDSTLTAALLEESFNKIHLITYNRFGFHETDNTAVQAQL-----L 55

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
             K+        IL +  L    H S     +   +      +      +   V      
Sbjct: 56  KDKFGSDKFIHEILNVDKL--FKHVSYENYFSNIRKFGLFNLSTCGLCKLSMHVRTIKYC 113

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
               I  +  G  +         +           + G+     V       +K   
Sbjct: 114 NDNNIKYVADGANQAMSMFPAQMKGVIDELKRMYEHFGITYFNPVFEMDGPEEKGFI 170


>gi|237750957|ref|ZP_04581437.1| tRNA(Ile)-lysidine synthase [Helicobacter bilis ATCC 43879]
 gi|229373402|gb|EEO23793.1| tRNA(Ile)-lysidine synthase [Helicobacter bilis ATCC 43879]
          Length = 369

 Score = 43.4 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 24/178 (13%), Positives = 49/178 (27%), Gaps = 5/178 (2%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           I+ K  + LL FSGG DS+      ++     +    DYG+R++ + E  +   K + + 
Sbjct: 18  ILSKNKN-LLAFSGGIDSTALFFVLMEHKIEFDIAIIDYGKRSQSKDE--VLYAKSLAKQ 74

Query: 64  MPKWKDSLGEDHIL-PLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
             K   +L  + I                  + +    +NL         + +     + 
Sbjct: 75  YKKQCYTLISESITKDFEHNARNIRYDFFHKIIITHDYHNLITAHHFDDRLEWFFMQLSC 134

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
              L        + E                      L       +    +     + 
Sbjct: 135 GAGLNTLLGFHDITERMIHNKVYYLVRPFITYTKQEILNYNHTNNIK-YFIDTSNSDI 191


>gi|227872480|ref|ZP_03990820.1| NAD(+) synthase (glutamine-hydrolyzing) [Oribacterium sinus F0268]
 gi|227841681|gb|EEJ51971.1| NAD(+) synthase (glutamine-hydrolyzing) [Oribacterium sinus F0268]
          Length = 656

 Score = 43.4 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 29/87 (33%), Gaps = 8/87 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF-------DRVETLSFDYGQRNKVELECRLCVRKKIV 61
              +L  SGG DS+  L   L+ F       + +  ++      +K   +    + K + 
Sbjct: 349 KKLILGLSGGLDSTLALFVCLETFALLGYDKENILCITMPSFGTSKKTHDSAEKLAKALG 408

Query: 62  ELMPKWK-DSLGEDHILPLAILGDISH 87
             + +   +     H   +   G+   
Sbjct: 409 ISLREISIEKAVLQHFFDIGHDGEKKD 435


>gi|169835698|ref|ZP_02868886.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [candidate division TM7 single-cell isolate TM7a]
          Length = 516

 Score = 43.4 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 51/185 (27%), Gaps = 15/185 (8%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            LL  SGG DSS       +    ++  +  D G   K E        KK++E   +  D
Sbjct: 219 VLLALSGGVDSSVAAVLINNAIGHQLTCMFVDTGLLRKDEG-------KKVLEYYKEHFD 271

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                       L  +      +     I +  +       R                  
Sbjct: 272 LNIVFVDAKDRFLNKLKGVDEPEAKRKIIGNEFIEVFNEEIRK-------LKGQEGAKFL 324

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                  +   S        TI++      L  +    +  PL  L K E  K+  ++G 
Sbjct: 325 AQGTIYPDVIESQSIKGPSHTIKSHHNVGGLPEDLQFELLEPLKELFKDEVRKVGHELGL 384

Query: 190 QDLVN 194
            D + 
Sbjct: 385 PDTII 389


>gi|220921297|ref|YP_002496598.1| GMP synthase [Methylobacterium nodulans ORS 2060]
 gi|219945903|gb|ACL56295.1| GMP synthase, large subunit [Methylobacterium nodulans ORS 2060]
          Length = 518

 Score = 43.4 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 58/183 (31%), Gaps = 17/183 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DS+       +   +++  +  D+G     E        +++V L     
Sbjct: 222 KVLCGLSGGVDSAVAAVLIHEAIGEQLTCVFVDHGLLRLGE-------AEEVVRLFRDHY 274

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +            LG +   +   +  +K +        V       +  AA LA     
Sbjct: 275 NIPLVHVQAQDLFLGAL---AGVTDPEVKRKTIGRLFIDVFEAEAKKIGGAAFLAQGT-- 329

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
               +     +   +      TI++      L    ++ +  PL  L K E   L +++G
Sbjct: 330 ----LYPDVIESVSFTGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRVLGRELG 385

Query: 189 GQD 191
             D
Sbjct: 386 LPD 388


>gi|78356646|ref|YP_388095.1| hypothetical protein Dde_1603 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219051|gb|ABB38400.1| hypothetical protein Dde_1603 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 362

 Score = 43.4 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
           K+   A+L+ SGG+DS+       ++    +  L+ D     +   E    + K +
Sbjct: 61  KRKYDAILMMSGGKDSAYLAWLLKEKYGLTILALTIDNNFEYEETFERASELCKTL 116


>gi|159903879|ref|YP_001551223.1| tRNA-specific 2-thiouridylase MnmA [Prochlorococcus marinus str.
           MIT 9211]
 gi|205816902|sp|A9BBQ7|MNMA_PROM4 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|159889055|gb|ABX09269.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prochlorococcus marinus str. MIT 9211]
          Length = 406

 Score = 43.4 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 46/175 (26%), Gaps = 11/175 (6%)

Query: 11  ALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A+ +  SGG DSS   +  ++   +VE L+        +      C  + +V+     + 
Sbjct: 38  AIAVGLSGGVDSSLTAALLVEAGWKVEGLTL------WLMEGKGSCCTEGLVDAAGICEQ 91

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA-YRLGI 128
                H++            + +N+    Q+   P         +        A     +
Sbjct: 92  LKIPHHVVDE---RSTFQKEVVENLVNGYQEGITPLPCSRCNRFVKFSPMINWARKNRNL 148

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             I  G          +  +           L         +  ++    E    
Sbjct: 149 KRIATGHYARIKHAETNKLNSLDERKNRHQLLRGIDQNKDQSYFLYDLSQEILGH 203


>gi|300113174|ref|YP_003759749.1| tRNA methyl transferase-like protein [Nitrosococcus watsonii C-113]
 gi|299539111|gb|ADJ27428.1| tRNA methyl transferase-like protein [Nitrosococcus watsonii C-113]
          Length = 347

 Score = 43.4 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 22/180 (12%), Positives = 50/180 (27%), Gaps = 10/180 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ---RNKVELECRLCVRKKIV 61
           + +   A+ L SGG DS   +    ++   VE ++F  G     +   +  +   + K  
Sbjct: 1   MGRQYKAIALVSGGLDSMLAVKVIQEQGIHVEGINFFTGFCVEGHTHAIRNKDKNKAKRN 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
             +   +    + H++ +              V                     +  A  
Sbjct: 61  NALWVAEQLGIKLHMIEVI-------EEYKNVVLNPKYGYGANLNPCLDCKSFMVGKALA 113

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
                    I+ G            +   + A E+  +  +   +      + L + E W
Sbjct: 114 WMKENNFDFIITGEVVGQRPKSQRAKTMPVVARESGAHDLLLRPLCAKNLPLTLPEREGW 173


>gi|239623060|ref|ZP_04666091.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239522427|gb|EEQ62293.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 483

 Score = 43.4 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 22/219 (10%), Positives = 58/219 (26%), Gaps = 27/219 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +    L+   GG+DS+  L       + +     +         E       +++     
Sbjct: 168 QEKGVLVPIGGGKDSAVTLELLRSAGETIHAYIINPRGATIHTTEAAGLKESQVINARRT 227

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              ++ E        L    + +     +  +  +++    + G + + L   ++     
Sbjct: 228 LDPNMLE--------LNRQGYLNGHTPFSALVAFSSIIAARMHGLSWVALSNESSANES- 278

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                   V  +  +          +      N  +    +  + L  L +++       
Sbjct: 279 -------TVQGSTVNHQYSKSFKFEKDFHEYENRYLPGSASYFSLLRPLSEFQIAGYFAR 331

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACY 225
                 +        +C  G R   +     C  CP C 
Sbjct: 332 QKQYHPIF------RSCNAGSRTDSW-----CGHCPKCL 359


>gi|119468510|ref|ZP_01611601.1| argininosuccinate synthase [Alteromonadales bacterium TW-7]
 gi|119448018|gb|EAW29283.1| argininosuccinate synthase [Alteromonadales bacterium TW-7]
          Length = 400

 Score = 43.4 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 16/54 (29%), Gaps = 1/54 (1%)

Query: 5  IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          +      +L +SGG D S+       +    V     D GQ  +          
Sbjct: 1  MSSIKKVVLAYSGGLDTSAIVPWLKENYGCEVIAFVADVGQGAEELEGVEEKAI 54


>gi|91787483|ref|YP_548435.1| argininosuccinate synthase [Polaromonas sp. JS666]
 gi|123165130|sp|Q12D55|ASSY_POLSJ RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|91696708|gb|ABE43537.1| argininosuccinate synthase [Polaromonas sp. JS666]
          Length = 446

 Score = 43.4 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 27/72 (37%), Gaps = 3/72 (4%)

Query: 1  MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M  I++  P      + FSGG D+S  L W   +       + + GQ ++ + +      
Sbjct: 1  MATILQNLPAGQKVGIAFSGGLDTSAALHWMKLKGALPYAYTANLGQPDEPDYDEIPRKA 60

Query: 58 KKIVELMPKWKD 69
           +      +  D
Sbjct: 61 LQYGAEKARLID 72


>gi|56459724|ref|YP_155005.1| argininosuccinate synthase [Idiomarina loihiensis L2TR]
 gi|61211401|sp|Q5QWZ9|ASSY_IDILO RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|56178734|gb|AAV81456.1| Argininosuccinate synthase [Idiomarina loihiensis L2TR]
          Length = 403

 Score = 43.4 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 17/54 (31%), Gaps = 1/54 (1%)

Query: 5  IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          +      +L +SGG D S+       +    V     D GQ  +         +
Sbjct: 1  MSNVKKVVLAYSGGLDTSAIVPWLKENYGCEVVAFVADVGQGAEELEGVEEKAK 54


>gi|126462170|ref|YP_001043284.1| hypothetical protein Rsph17029_1402 [Rhodobacter sphaeroides ATCC
           17029]
 gi|126103834|gb|ABN76512.1| conserved hypothetical protein [Rhodobacter sphaeroides ATCC 17029]
          Length = 404

 Score = 43.4 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 9/63 (14%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETL------SFDYGQRNKVELECRLCVRKKIV 61
               L++FSGG DS+      L+R  R E +        +YG     + +  L   + ++
Sbjct: 142 RKKELVMFSGGVDST---YMLLERGRRPEPVAALTVQGMEYGHGADAQFQRSLRHSQPLL 198

Query: 62  ELM 64
           + +
Sbjct: 199 DAL 201


>gi|332981330|ref|YP_004462771.1| PP-loop domain-containing protein [Mahella australiensis 50-1
          BON]
 gi|332699008|gb|AEE95949.1| PP-loop domain protein [Mahella australiensis 50-1 BON]
          Length = 289

 Score = 43.4 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 1/68 (1%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKK 59
          + DI+    +A++ +SGG DS+  L  A D   D V  ++       + E      + K+
Sbjct: 16 LKDILTDMGNAVIAYSGGVDSTFLLKVAHDVLGDNVIAVTARSSTYPEREFNEACELVKQ 75

Query: 60 IVELMPKW 67
          I       
Sbjct: 76 IGAKHVVI 83


>gi|307543917|ref|YP_003896396.1| NAD+ synthetase [Halomonas elongata DSM 2581]
 gi|307215941|emb|CBV41211.1| NAD+ synthetase [Halomonas elongata DSM 2581]
          Length = 557

 Score = 43.4 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 45/168 (26%), Gaps = 5/168 (2%)

Query: 10  SALLL-FSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             ++L  SGG DS+  L+ A+D     RV  +   Y     +  E      + +      
Sbjct: 299 KGVVLGLSGGIDSALSLAIAVDALGPQRVHAVMMPYHYTADISKEDAAEQARMLGVDYEV 358

Query: 67  WK-DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              +S+ E  +  LA     +    T+          L       + ++ L         
Sbjct: 359 LPIESMVEAFMDTLADSFAGTERDTTEENLQSRCRGVLLMAISNKKGLMVLSTGNKSEMA 418

Query: 126 LGITNIVIGVCETDYSGYP-DCRHDTIRAIETAINLGMESHVTVHTPL 172
           +G   +   +     +            A              +  P 
Sbjct: 419 VGYATLYGDMVGGYNAIKDVYKTWVYRLARWRNTQDPAIPERVIERPP 466


>gi|296327752|ref|ZP_06870291.1| GMP synthase (glutamine-hydrolyzing) [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
 gi|296155099|gb|EFG95877.1| GMP synthase (glutamine-hydrolyzing) [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
          Length = 512

 Score = 43.4 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 58/187 (31%), Gaps = 18/187 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +        ++  +  D G   K E        K+++E+  K
Sbjct: 215 NKQVILGLSGGVDSSVAAALINKAIGRQLTCIFVDTGLLRKDE-------AKQVMEVYAK 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D   +        L  ++  +  +     I    +                   A  L
Sbjct: 268 NFDMNIKCINAEERFLTKLAGVTDPETKRKIIGKEFVE-------VFNEEAKKIEGAEFL 320

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+     P      I++      L  +    +  PL  L K E  K+ ++
Sbjct: 321 AQGTIYPDVIESVSVKGPSVT---IKSHHNVGGLPEDLKFELLEPLRELFKDEVRKVGRE 377

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 378 LGIPDYM 384


>gi|293394728|ref|ZP_06639020.1| tRNA(Ile)-lysidine synthetase [Serratia odorifera DSM 4582]
 gi|291422854|gb|EFE96091.1| tRNA(Ile)-lysidine synthetase [Serratia odorifera DSM 4582]
          Length = 436

 Score = 43.4 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 24/65 (36%), Gaps = 5/65 (7%)

Query: 12 LLLFSGGQDSSTCLSWALD-RFDRVE----TLSFDYGQRNKVELECRLCVRKKIVELMPK 66
          L+ FSGG DSS  L   +  R  R E     +   +G     +     C R+     +P 
Sbjct: 21 LVAFSGGLDSSVLLHLLVQLRQRRPELQLRAVHVHHGLSALADDWVAHCQRQCANWQVPL 80

Query: 67 WKDSL 71
              +
Sbjct: 81 VVQYV 85


>gi|148554242|ref|YP_001261824.1| GMP synthase [Sphingomonas wittichii RW1]
 gi|148499432|gb|ABQ67686.1| GMP synthase (glutamine-hydrolyzing) [Sphingomonas wittichii RW1]
          Length = 530

 Score = 43.4 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 55/184 (29%), Gaps = 17/184 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+       +   D++  +  D+G     E         ++V L     
Sbjct: 234 RVICGLSGGVDSAVAAVLIHEAIGDQLTCVFVDHGLMRMGE-------ADQVVGLFR--- 283

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E + +PL  +   +            +                       A  L  
Sbjct: 284 ----EHYGIPLVHVNAETLFLNGLKGVTDPEAKRKFIGKTFIEVFEAEAKKIGGADFLAQ 339

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+    +      TI++      L    ++ +  PL  L K E   L +++G
Sbjct: 340 GTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRALGRELG 397

Query: 189 GQDL 192
             ++
Sbjct: 398 LPEI 401


>gi|19704776|ref|NP_604338.1| GMP synthase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
 gi|24211750|sp|Q8RDR4|GUAA_FUSNN RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|19715106|gb|AAL95637.1| GMP synthase (glutamine-hydrolyzing) [Fusobacterium nucleatum
           subsp. nucleatum ATCC 25586]
          Length = 512

 Score = 43.4 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 58/187 (31%), Gaps = 18/187 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +        ++  +  D G   K E        K+++E+  K
Sbjct: 215 NKQVILGLSGGVDSSVAAALINKAIGRQLTCIFVDTGLLRKDE-------AKQVMEVYAK 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D   +        L  ++  +  +     I    +                   A  L
Sbjct: 268 NFDMNIKCINAEERFLTKLAGVTDPETKRKIIGKEFVE-------VFNEEAKKIEGAEFL 320

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+     P      I++      L  +    +  PL  L K E  K+ ++
Sbjct: 321 AQGTIYPDVIESVSVKGPSVT---IKSHHNVGGLPEDLKFELLEPLRELFKDEVRKVGRE 377

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 378 LGIPDYM 384


>gi|329297572|ref|ZP_08254908.1| GMP synthase [Plautia stali symbiont]
          Length = 526

 Score = 43.4 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 49/184 (26%), Gaps = 17/184 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS           +R+  +  D G    + L     V     +    
Sbjct: 228 EDRVILGLSGGVDSSVTAMLLHRAIGERLTCVFVDNG---LLRLNEAEQVMDMFGDHFGL 284

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +  +     A+ G+    +  K +     +                          
Sbjct: 285 NIVHVAAEGRFLDALAGENDPEAKRKIIGRVFVEVFDEEALKLTDVKWLAQGT------- 337

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                 I     + +     +   I++      L  E  + +  PL  L K E  K+  +
Sbjct: 338 ------IYPDVIESAASTTGKAHVIKSHHNVGGLPKEMKMGLIEPLKELFKDEVRKIGLE 391

Query: 187 IGGQ 190
           +G  
Sbjct: 392 LGLP 395


>gi|224538422|ref|ZP_03678961.1| hypothetical protein BACCELL_03316 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519957|gb|EEF89062.1| hypothetical protein BACCELL_03316 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 517

 Score = 43.4 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 48/187 (25%), Gaps = 21/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D+G   K E +                
Sbjct: 214 DKVVLGLSGGVDSSVAAVLLNRAIGKNLTCIFVDHGMLRKNEFK---------------- 257

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                  H      L  I   +  K  A                     VF         
Sbjct: 258 ----NVLHDYECLGLNVIGVDASAKFFAELAGVTEPEEKRKIIGKGFIEVFDEEAHKIKD 313

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G    D           I++      L  + H+ +  PL  L K E  ++ + +
Sbjct: 314 VKWLAQGTIYPDCIESLSITGTVIKSHHNVGGLPEKMHLKLCEPLRLLFKDEVRRVGRGL 373

Query: 188 GGQDLVN 194
           G  + + 
Sbjct: 374 GMPEHLI 380


>gi|189467907|ref|ZP_03016692.1| hypothetical protein BACINT_04299 [Bacteroides intestinalis DSM
           17393]
 gi|189436171|gb|EDV05156.1| hypothetical protein BACINT_04299 [Bacteroides intestinalis DSM
           17393]
          Length = 517

 Score = 43.4 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 48/187 (25%), Gaps = 21/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D+G   K E +                
Sbjct: 214 DKVVLGLSGGVDSSVAAVLLNRAIGKNLTCIFVDHGMLRKNEFK---------------- 257

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                  H      L  I   +  K  A                     VF         
Sbjct: 258 ----NVLHDYECLGLNVIGVDASAKFFAELAGVTEPEEKRKIIGKGFIEVFDEEAHKIKD 313

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G    D           I++      L  + H+ +  PL  L K E  ++ + +
Sbjct: 314 VKWLAQGTIYPDCIESLSITGTVIKSHHNVGGLPEKMHLKLCEPLRLLFKDEVRRVGRGL 373

Query: 188 GGQDLVN 194
           G  + + 
Sbjct: 374 GMPEHLI 380


>gi|186513287|ref|NP_001119047.1| arginosuccinate synthase family [Arabidopsis thaliana]
 gi|332659569|gb|AEE84969.1| argininosuccinate synthase [Arabidopsis thaliana]
          Length = 450

 Score = 43.4 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 22/179 (12%), Positives = 47/179 (26%), Gaps = 10/179 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K    +L +SGG D+S  + W  +     V   + D GQ   ++    L  + K      
Sbjct: 95  KLKKVVLAYSGGLDTSVIVPWLKENYGCEVVCFTADVGQ--GIKELEGLEQKAKASGASQ 152

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                L E+ +            +        +   ++    +    +         A  
Sbjct: 153 LVVKDLTEEFVKDFIF---PCLRAGAIYERKYLLGTSMARPVIAKAMVDVAAEVGADAVA 209

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESHVTVHTPLMWLKKYET 180
            G T         + + +       + A      +        +   H   + + K   
Sbjct: 210 HGCTGKGNDQVRFELTFFSLNPELKVVAPWREWEIQGREDAIEYAKKHNVPVPVTKKSI 268


>gi|118465034|ref|YP_883483.1| GMP synthase [Mycobacterium avium 104]
 gi|118166321|gb|ABK67218.1| glutamine-hydrolyzing GMP synthase [Mycobacterium avium 104]
          Length = 509

 Score = 43.4 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 51/184 (27%), Gaps = 16/184 (8%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A+   SGG DS+   +       DR+  +  D+G      L       +   + +     
Sbjct: 212 AICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHG------LLRAGERAQVQRDFVAATGA 265

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +L            D + + L     +   +                     L  +    
Sbjct: 266 NLVTV---------DAADTFLQALAGVTNPEGKRKIIGRQFIRAFEGAVRDVLGDKPVEF 316

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   +               I++      L  +   T+  PL  L K E   + +++G 
Sbjct: 317 LVQGTLYPDVVESGRGSGTANIKSHHNVGGLPGDLKFTLVEPLRLLFKDEVRAVGRELGL 376

Query: 190 QDLV 193
            + +
Sbjct: 377 PEEI 380


>gi|114776442|ref|ZP_01451487.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mariprofundus ferrooxydans PV-1]
 gi|114553272|gb|EAU55670.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mariprofundus ferrooxydans PV-1]
          Length = 374

 Score = 43.4 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 21/183 (11%), Positives = 42/183 (22%), Gaps = 10/183 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG--QRNKVELECRLCVRKKIVELMPKW 67
             +   SGG DSS       +    V  +  +     R++V      C  +   +     
Sbjct: 23  RVIAAMSGGVDSSVMAVLLKEAGVDVIGVFLNVWDYSRDEVNRHGSCCSLEDSYDARRVA 82

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                  + + +          +        +    PN        +        A +L 
Sbjct: 83  DHIGIPFYAMDMRD---EFRRDVIDPFIQDYETGRTPNPCERCNRFVKFGALLEAADKLE 139

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              +  G                                      +  P+  L+K +T +
Sbjct: 140 AAYVATGHYVRRRDDNDGIHLFKGNDARKDQSYFLATTNRAQAERILFPVGGLEKDDTRR 199

Query: 183 LAQ 185
           LA 
Sbjct: 200 LAH 202


>gi|460631|gb|AAA77671.1| asparagine synthetase [Rattus norvegicus]
 gi|460633|gb|AAA77672.1| asparagine synthetase [Rattus norvegicus]
          Length = 561

 Score = 43.4 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 4/62 (6%)

Query: 13  LLFSGGQDSSTCLSWALDRFDR---VETL-SFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            L SGG DSS   +  L +         L +F  G  +  +L     V   I     +  
Sbjct: 255 CLLSGGLDSSLVAASLLKQLKEAQVPYALQTFAIGMEDSPDLLAARKVANYIGSEHHEVL 314

Query: 69  DS 70
            +
Sbjct: 315 FN 316


>gi|22328910|ref|NP_194214.2| arginosuccinate synthase family [Arabidopsis thaliana]
 gi|78099761|sp|Q9SZX3|ASSY_ARATH RecName: Full=Argininosuccinate synthase, chloroplastic; AltName:
           Full=Citrulline--aspartate ligase; Flags: Precursor
 gi|17529036|gb|AAL38728.1| putative argininosuccinate synthase [Arabidopsis thaliana]
 gi|20259085|gb|AAM14258.1| putative argininosuccinate synthase [Arabidopsis thaliana]
 gi|332659568|gb|AEE84968.1| argininosuccinate synthase [Arabidopsis thaliana]
          Length = 494

 Score = 43.4 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 22/179 (12%), Positives = 47/179 (26%), Gaps = 10/179 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K    +L +SGG D+S  + W  +     V   + D GQ   ++    L  + K      
Sbjct: 95  KLKKVVLAYSGGLDTSVIVPWLKENYGCEVVCFTADVGQ--GIKELEGLEQKAKASGASQ 152

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                L E+ +            +        +   ++    +    +         A  
Sbjct: 153 LVVKDLTEEFVKDFIF---PCLRAGAIYERKYLLGTSMARPVIAKAMVDVAAEVGADAVA 209

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESHVTVHTPLMWLKKYET 180
            G T         + + +       + A      +        +   H   + + K   
Sbjct: 210 HGCTGKGNDQVRFELTFFSLNPELKVVAPWREWEIQGREDAIEYAKKHNVPVPVTKKSI 268


>gi|311694941|gb|ADP97814.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [marine bacterium HP15]
          Length = 525

 Score = 43.4 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 54/185 (29%), Gaps = 19/185 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMP 65
               LL  SGG DSS   +       D++  +  D G  R     +        +   + 
Sbjct: 227 NDKVLLGLSGGVDSSVTAALLHRAIGDQLTCVFVDNGLLRLHEGDQVMDMFASNMGVKVI 286

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +          L L+ L  +S     + +      +   +     +++ +L         
Sbjct: 287 RVDAED-----LFLSKLKGVSDPEQKRKIIGNTFIDVFDDEAANIKDVNWLAQGTIY--- 338

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                        + +     +   I++      L     + +  PL  L K E  ++  
Sbjct: 339 ---------PDVIESAASKTGKAHVIKSHHNVGGLPETMKMKLVEPLRELFKDEVRRIGL 389

Query: 186 DIGGQ 190
           ++G  
Sbjct: 390 ELGLP 394


>gi|154150379|ref|YP_001403997.1| argininosuccinate synthase [Candidatus Methanoregula boonei 6A8]
 gi|153998931|gb|ABS55354.1| Argininosuccinate synthase [Methanoregula boonei 6A8]
          Length = 403

 Score = 43.4 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 61/204 (29%), Gaps = 10/204 (4%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVE--L 63
             + +L +SGG D+S C+    +R  +DRV T++ + GQR++ E++      KK+ +   
Sbjct: 3   KGTIVLAYSGGLDTSICIPLLKERYDYDRVVTVAVNVGQRDE-EIDVATKKGKKLADRHY 61

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
               ++    +HI P                  +                  +    T  
Sbjct: 62  TIDVRERFVAEHIFPAIRANGSYEGYPMGTSLARPLIAQEVVKIAQKEKATAIAHGCTGK 121

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
               +    I          P    +  R  E          V V     W      W  
Sbjct: 122 GNDQLRFDFIIRAAGFEVVAPIREQNLTRDWEIGYAKEHNIPVPVKKDKPWSMDENCWSR 181

Query: 184 AQDIGGQDLVNL-----ILEESHT 202
           + + G  +  +      I   + +
Sbjct: 182 SIEGGRLEEPDFHPPEEIFLWTVS 205


>gi|94676863|ref|YP_588575.1| tRNA(Ile)-lysidine synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|94220013|gb|ABF14172.1| tRNA(Ile)-lysidine synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 486

 Score = 43.4 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 23/223 (10%), Positives = 67/223 (30%), Gaps = 31/223 (13%)

Query: 10  SALLLFSGGQDSSTCLSWA----------LDRFDRVETLSFDYG--------QRNKVELE 51
             +L FSGG DS+  L             +     +  +  ++G        Q +  +  
Sbjct: 24  KLVLAFSGGLDSTVLLDILTSLRDTNNSKITALFSLRAVHINHGFNSNSDDWQIHCEQQC 83

Query: 52  CRLCVRKKIVELMPKWKDSLGE--------DHILPLAILGDISHSSLTKNVAMK-----I 98
            +  V    +++  K K++  E          +  +   G+I  ++  ++  ++     I
Sbjct: 84  RQRAVPYHFIKVRLKTKNNGVEAAARYARYQALYDVLKPGEILLTAQHQDDQVETLLLAI 143

Query: 99  QDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAI 158
           +  + P                 +   L  + + +    + ++                 
Sbjct: 144 KRGSGPTGLSGMATNANWGDYRLIRPLLTCSRMQLNRYASYFNLNWIEDDSNKNDRFDRN 203

Query: 159 NLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESH 201
            L +   + +        K            ++L++ +L+++ 
Sbjct: 204 FLRLHIIIQLQKRWPQFSKSAIRSAQLCAEQENLLDELLKDTL 246


>gi|89901465|ref|YP_523936.1| argininosuccinate synthase [Rhodoferax ferrireducens T118]
 gi|89346202|gb|ABD70405.1| argininosuccinate synthase [Rhodoferax ferrireducens T118]
          Length = 447

 Score = 43.4 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++   +       +      +  D
Sbjct: 17 IAFSGGLDTSAALHWMKLKGALPYAYTANLGQPDETNYDDIPRKAMEYGAEKARLID 73


>gi|301383970|ref|ZP_07232388.1| cell cycle protein mesJ, putative [Pseudomonas syringae pv. tomato
           Max13]
 gi|302064144|ref|ZP_07255685.1| cell cycle protein mesJ, putative [Pseudomonas syringae pv. tomato
           K40]
 gi|302134071|ref|ZP_07260061.1| cell cycle protein mesJ, putative [Pseudomonas syringae pv. tomato
           NCPPB 1108]
          Length = 445

 Score = 43.4 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 23/70 (32%), Gaps = 7/70 (10%)

Query: 15  FSGGQDSSTCLSWALDRFDR-----VETLSFDYGQR--NKVELECRLCVRKKIVELMPKW 67
           FSGG DS+  L    +   R     +  +   +G +       E    V + +       
Sbjct: 32  FSGGLDSTVLLHLLAELAKRANLPALHAIHVHHGLQAIADAWPEHCRQVCQALGVAFESV 91

Query: 68  KDSLGEDHIL 77
           +  +  D  +
Sbjct: 92  RVKVEPDASV 101


>gi|262306067|gb|ACY45626.1| gln amidotransferase [Plathemis lydia]
          Length = 196

 Score = 43.4 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 22/60 (36%), Gaps = 2/60 (3%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            LLL SGG DS+ C +          + T+  D G   K +        +KI   +    
Sbjct: 46  VLLLASGGVDSTVCAALLRKALPEDQLITVHIDNGFMRKNDRIDVEQTLRKICPKLKIIN 105


>gi|213969135|ref|ZP_03397274.1| cell cycle protein mesJ [Pseudomonas syringae pv. tomato T1]
 gi|213926133|gb|EEB59689.1| cell cycle protein mesJ [Pseudomonas syringae pv. tomato T1]
          Length = 455

 Score = 43.4 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 23/70 (32%), Gaps = 7/70 (10%)

Query: 15  FSGGQDSSTCLSWALDRFDR-----VETLSFDYGQR--NKVELECRLCVRKKIVELMPKW 67
           FSGG DS+  L    +   R     +  +   +G +       E    V + +       
Sbjct: 42  FSGGLDSTVLLHLLAELAKRANLPALHAIHVHHGLQAIADAWPEHCRQVCQALGVAFESV 101

Query: 68  KDSLGEDHIL 77
           +  +  D  +
Sbjct: 102 RVKVEPDASV 111


>gi|218296113|ref|ZP_03496882.1| Argininosuccinate synthase [Thermus aquaticus Y51MC23]
 gi|218243490|gb|EED10019.1| Argininosuccinate synthase [Thermus aquaticus Y51MC23]
          Length = 400

 Score = 43.4 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 2/72 (2%)

Query: 10 SALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKI-VELMPKW 67
            +L +SGG D+S  L W  +     V   + D GQ  +VE      ++      +    
Sbjct: 2  KIVLAYSGGLDTSIILKWLKETYGAEVIAFTADIGQGEEVEEAREKALKTGASKAIALDL 61

Query: 68 KDSLGEDHILPL 79
          K+    D + P+
Sbjct: 62 KEEFVRDFVFPM 73


>gi|229917939|ref|YP_002886585.1| GMP synthase, large subunit [Exiguobacterium sp. AT1b]
 gi|229469368|gb|ACQ71140.1| GMP synthase, large subunit [Exiguobacterium sp. AT1b]
          Length = 513

 Score = 43.4 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 58/186 (31%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS   +       D++  +  D+G   K E      V K   +     
Sbjct: 219 KQVLCALSGGVDSSVVAALVHRAIGDQLTCMFVDHGLLRKGE---ADSVMKTFAD----- 270

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G +  +      +   + L      + +   + N F+   +              G
Sbjct: 271 ----GFNMKVIKIDAQERFLTKLAGVSDPEQKRKIIGNEFIYVFDEEASKLVDMDFLAQG 326

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I    TD +        TI++      L  + + T+  PL  L K E   L  ++
Sbjct: 327 TLYTDIIESGTDTA-------QTIKSHHNVGGLPEDMNFTLIEPLNTLFKDEVRALGTEL 379

Query: 188 GGQDLV 193
           G  D +
Sbjct: 380 GLPDYI 385


>gi|220930618|ref|YP_002507527.1| hypothetical protein Ccel_3258 [Clostridium cellulolyticum H10]
 gi|220000946|gb|ACL77547.1| conserved hypothetical protein [Clostridium cellulolyticum H10]
          Length = 355

 Score = 43.4 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 44/167 (26%), Gaps = 14/167 (8%)

Query: 12  LLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           L++ SGG+DS          +   +  L+ D G   +   +    + KK+          
Sbjct: 69  LVMLSGGKDSIYVAYILSKVYKLNIVGLTIDNGFEYQSTFDNSYDIAKKLG--------- 119

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                I  L       + +           +     F  GR +  +         +    
Sbjct: 120 -ISHFIYRLPFEDMREYYNFLLTEDTLKLQDCSQLCFFCGRLLKTISIKVAKMLNVTAVF 178

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
               + +    G  + +  +       I       V  +   + L K
Sbjct: 179 SGHTLEQIRALGDEEGKDKSFDIRRRYI---QNYSVQNYKKALDLLK 222


>gi|83309831|ref|YP_420095.1| GMP synthase [Magnetospirillum magneticum AMB-1]
 gi|82944672|dbj|BAE49536.1| GMP synthase [Magnetospirillum magneticum AMB-1]
          Length = 518

 Score = 43.4 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 60/186 (32%), Gaps = 21/186 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK--IVELM 64
           +   +   SGG DSS   +   +   D++  +  D G     E E  + V +    ++L+
Sbjct: 219 SGRVICGLSGGVDSSVVAALLHEAIGDQLTCVFVDTGFMRAGESEQVVSVFRDRFNIKLV 278

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            K    L  D +  L              + +  ++                  A   A 
Sbjct: 279 HKDASGLFLDKLASLTDPEKKRKIIGATFIDVFEEE----------------AKAVGGAD 322

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            L    +   V E+    +      TI++      L    ++ +  PL  L K E   L 
Sbjct: 323 FLAQGTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRALG 380

Query: 185 QDIGGQ 190
           +++G  
Sbjct: 381 RELGLP 386


>gi|84683380|ref|ZP_01011283.1| glutamine-dependent NAD(+) synthetase [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84668123|gb|EAQ14590.1| glutamine-dependent NAD(+) synthetase [Rhodobacterales bacterium
           HTCC2654]
          Length = 555

 Score = 43.4 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 62/214 (28%), Gaps = 18/214 (8%)

Query: 1   MNDIIKKA--PSALLLFSGGQDSSTCLSWALD----RFDRVETLSFDYGQRNKVELECRL 54
           + D + K      LL  SGG DS+   + A D       R   L  +Y   ++  L+   
Sbjct: 278 LRDYMGKTGFKKVLLGLSGGIDSAIVATIAADALGPENVRCVMLPSEYT--SQGSLDDAK 335

Query: 55  CVRKKIVELMPKWKDSLGEDHILP-LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
            V +++             D +   LA L +     LT+          L          
Sbjct: 336 AVAERLGCHYDFVPIKGPRDAVTEALAPLFEGYAPDLTEENIQSRLRGLLLMAMSNKFGE 395

Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRH------DTIRAIETAINLGM---ES 164
           + L         +G   I   +           +           A      +G      
Sbjct: 396 MLLTTGNKSEVAVGYATIYGDMAGGYNPIKDLYKMRVFETCRWRNANHRDWMMGPAGEVI 455

Query: 165 HVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILE 198
            V++       +  +  K +  +   ++++ ILE
Sbjct: 456 PVSIIDKPPSAELRDDQKDSDSLPPYEVLDAILE 489


>gi|94986166|ref|YP_605530.1| argininosuccinate synthase [Deinococcus geothermalis DSM 11300]
 gi|119361271|sp|Q1IWM3|ASSY_DEIGD RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|94556447|gb|ABF46361.1| Argininosuccinate synthase [Deinococcus geothermalis DSM 11300]
          Length = 414

 Score = 43.4 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 2/75 (2%)

Query: 7  KAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCV-RKKIVELM 64
          +    +L +SGG D+S  L W   +R   V T + D GQ ++VE      +    +    
Sbjct: 8  QKDKIVLAYSGGLDTSIILKWLQTERNYDVVTFTADLGQGDEVEEARVKALNTGAVAAYA 67

Query: 65 PKWKDSLGEDHILPL 79
             ++    D++ P+
Sbjct: 68 LDLREEFVRDYVFPM 82


>gi|323152109|gb|EFZ38402.1| thiamine biosynthesis thiI domain protein [Escherichia coli
           EPECa14]
          Length = 220

 Score = 43.4 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 14/33 (42%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
            L L SGG DS       + R  RV    F+ G
Sbjct: 180 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLG 212


>gi|299537437|ref|ZP_07050732.1| GMP synthase (glutamine-hydrolyzing) [Lysinibacillus fusiformis
           ZC1]
 gi|298727125|gb|EFI67705.1| GMP synthase (glutamine-hydrolyzing) [Lysinibacillus fusiformis
           ZC1]
          Length = 517

 Score = 43.4 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 49/186 (26%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+    K E+E              + 
Sbjct: 223 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCMFVDHNLNRKGEVE--------------QV 268

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +  ED  + L  +                +                          L 
Sbjct: 269 MKTFTEDFDMNLIKIDARKRFMDKLAGVSDPEKKRKIIGNEFIYVFDEEASKLEGMDFLA 328

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   + E+  S        TI++      L  +    +  PL  L K E   L  ++
Sbjct: 329 QGTLYTDIIESGTS-----TAQTIKSHHNVGGLPEDMQFQLIEPLKTLFKDEVRALGLEL 383

Query: 188 GGQDLV 193
           G  + +
Sbjct: 384 GLDEKI 389


>gi|292656744|ref|YP_003536641.1| GMP synthase (glutamine-hydrolyzing) subunit B [Haloferax volcanii
           DS2]
 gi|291371351|gb|ADE03578.1| GMP synthase (glutamine-hydrolyzing) subunit B [Haloferax volcanii
           DS2]
          Length = 305

 Score = 43.4 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 52/187 (27%), Gaps = 28/187 (14%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A++  SGG DSS   + A +   +++  +  D G   K E E    +             
Sbjct: 24  AIIALSGGVDSSVAATLAYEAVGEQLTPVYVDTGLMRKGETE---QIADTF--------- 71

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     + +  +            ++    P          F+      A      
Sbjct: 72  ----------SFMESLRVVDARDRFFDALEGVVDPEEKRKVIGEQFIREFEREAKETDAQ 121

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-VHTPLMWLKKYETWKLAQDIG 188
            +V                  I++      L        +  P+  L K E  ++A+ +G
Sbjct: 122 YLVQ----GTIYPDRIESEGNIKSHHNVGGLPDVVDFEGIVEPVRDLYKDEVREVARALG 177

Query: 189 GQDLVNL 195
            + ++  
Sbjct: 178 LESIIAE 184


>gi|169825804|ref|YP_001695962.1| GMP synthase [Lysinibacillus sphaericus C3-41]
 gi|168990292|gb|ACA37832.1| GMP synthase (glutamine-hydrolyzing) [Lysinibacillus sphaericus
           C3-41]
          Length = 530

 Score = 43.4 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 49/186 (26%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+    K E+E              + 
Sbjct: 236 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCMFVDHNLNRKGEVE--------------QV 281

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +  ED  + L  +                +                          L 
Sbjct: 282 MKTFTEDFDMNLIKIDARKRFMDKLAGVSDPEKKRKIIGNEFIYVFDEEASKLEGMDFLA 341

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   + E+  S        TI++      L  +    +  PL  L K E   L  ++
Sbjct: 342 QGTLYTDIIESGTS-----TAQTIKSHHNVGGLPEDMQFQLIEPLKTLFKDEVRALGLEL 396

Query: 188 GGQDLV 193
           G  + +
Sbjct: 397 GLDEKI 402


>gi|156741610|ref|YP_001431739.1| PP-loop domain-containing protein [Roseiflexus castenholzii DSM
           13941]
 gi|156232938|gb|ABU57721.1| PP-loop domain protein [Roseiflexus castenholzii DSM 13941]
          Length = 278

 Score = 43.4 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 61/199 (30%), Gaps = 35/199 (17%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
           +  I+++  SAL+ FSGG DS+  L  A D   +R    + D    ++      L   + 
Sbjct: 12  LQAILREIGSALIAFSGGVDSTLLLKVAHDTLGERAIAATAD----SETYPREELEQARA 67

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +  L       +G  HI+              +        N     +   R +   +  
Sbjct: 68  LATL-------IGCRHIVV----------CTNELSDEHYARNQPDRCYYCKRTLFTELQP 110

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
              A       +   + +   +  P  R     A+ + +                L K E
Sbjct: 111 LA-AELGVAAILYGAMADDIGTHRPGHRAAMEFAVRSPLIEA------------GLGKQE 157

Query: 180 TWKLAQDIGGQDLVNLILE 198
             +LA+ +G  +       
Sbjct: 158 IRELARRLGLPNWNKPSYA 176


>gi|311278572|ref|YP_003940803.1| GMP synthase, large subunit [Enterobacter cloacae SCF1]
 gi|308747767|gb|ADO47519.1| GMP synthase, large subunit [Enterobacter cloacae SCF1]
          Length = 525

 Score = 43.4 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAQQVMDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IVHVEGEKRFLDALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLRELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|308067527|ref|YP_003869132.1| GMP synthase (glutamin-hydrolyzing) [Paenibacillus polymyxa E681]
 gi|305856806|gb|ADM68594.1| GMP synthase (glutamin-hydrolyzing) [Paenibacillus polymyxa E681]
          Length = 512

 Score = 43.4 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 48/183 (26%), Gaps = 20/183 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V +  V      
Sbjct: 218 KKVLCALSGGVDSSVVAMLIHKAIGDQLTCMFIDHGLLRKGE---AESVMETFVGKFDMK 274

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +          L  ++     +     I +  +              F A       
Sbjct: 275 VVKIDARER----FLSKLAGVDDPEQKRKIIGNEFIYVFEEESSQFDDFTFLA------- 323

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                 G   TD          TI++      L       +  PL  L K E  K+ ++ 
Sbjct: 324 -----QGTLYTDIVESGTATAQTIKSHHNVGGLPENMKFKLIEPLNALFKDEVRKVGEEC 378

Query: 188 GGQ 190
           G  
Sbjct: 379 GLP 381


>gi|260582332|ref|ZP_05850125.1| DNA mismatch repair protein [Haemophilus influenzae NT127]
 gi|260094700|gb|EEW78595.1| DNA mismatch repair protein [Haemophilus influenzae NT127]
          Length = 430

 Score = 43.4 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%), Gaps = 3/68 (4%)

Query: 12 LLLFSGGQDSSTCL---SWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
          L+  SGG DS+  L   +    +   +  LS      +    +      K   +L  +++
Sbjct: 20 LIALSGGLDSTVLLSLFAKLRQKQPHLPPLSIRAIHIHHGLSQNADNWAKHCQDLCDQFQ 79

Query: 69 DSLGEDHI 76
            L  + +
Sbjct: 80 IPLIIERV 87


>gi|308235810|ref|ZP_07666547.1| argininosuccinate synthase [Gardnerella vaginalis ATCC 14018]
 gi|311114472|ref|YP_003985693.1| argininosuccinate synthase [Gardnerella vaginalis ATCC 14019]
 gi|310945966|gb|ADP38670.1| argininosuccinate synthase [Gardnerella vaginalis ATCC 14019]
          Length = 404

 Score = 43.4 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQ 44
          +      +L +SGG D+S  + +  ++    V  +S + GQ
Sbjct: 1  MTSKKRIVLAYSGGLDTSVAIPYLKEQTGQDVVAVSLNVGQ 41


>gi|70606217|ref|YP_255087.1| PP-loop family protein [Sulfolobus acidocaldarius DSM 639]
 gi|68566865|gb|AAY79794.1| pP-loop family protein [Sulfolobus acidocaldarius DSM 639]
          Length = 315

 Score = 43.4 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 25/91 (27%), Gaps = 9/91 (9%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLS----WALDRFDRVETLSFDYG-----QRNKVELEC 52
             +   +    +  SGG+DS+T L      A  R   +  +    G       +   LE 
Sbjct: 41  YKMFDGSDRIGVAVSGGKDSTTLLHLMNKLAQKRGFEIVGIHIHLGIDMGKGYSDKSLEF 100

Query: 53  RLCVRKKIVELMPKWKDSLGEDHILPLAILG 83
            L   + +                +  A   
Sbjct: 101 ALKNFQMLGVKYKLINVKEKYGFTIDEAKFK 131


>gi|15901606|ref|NP_346210.1| 7-cyano-7-deazaguanine reductase [Streptococcus pneumoniae TIGR4]
 gi|168493693|ref|ZP_02717836.1| NADPH-dependent 7-cyano-7-deazaguanine reductase (nadph-dependent
           nitrile oxidoreductase) [Streptococcus pneumoniae
           CDC3059-06]
 gi|81620365|sp|Q97P67|QUEF_STRPN RecName: Full=NADPH-dependent 7-cyano-7-deazaguanine reductase;
           AltName: Full=7-cyano-7-carbaguanine reductase; AltName:
           Full=NADPH-dependent nitrile oxidoreductase; AltName:
           Full=PreQ(0) reductase
 gi|14973274|gb|AAK75850.1| conserved hypothetical protein [Streptococcus pneumoniae TIGR4]
 gi|183576455|gb|EDT96983.1| NADPH-dependent 7-cyano-7-deazaguanine reductase (nadph-dependent
           nitrile oxidoreductase) [Streptococcus pneumoniae
           CDC3059-06]
          Length = 154

 Score = 43.4 bits (100), Expect = 0.029,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 40/103 (38%), Gaps = 10/103 (9%)

Query: 29  LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHS 88
           +  ++ VE ++F YGQR+ +E++    + K+               HIL +++LG I+  
Sbjct: 1   MQHYETVEAVTFAYGQRHHLEIQITREIAKEQG----------IRHHILDMSLLGQITAQ 50

Query: 89  SLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
                + +    + L       +  +F        +   I  I
Sbjct: 51  PDFATIHISYIPDKLCVESKSLKLYLFSYRNHGDFHENCINTI 93


>gi|332185016|ref|ZP_08386765.1| sulfate adenylyltransferase, small subunit [Sphingomonas sp. S17]
 gi|332014740|gb|EGI56796.1| sulfate adenylyltransferase, small subunit [Sphingomonas sp. S17]
          Length = 299

 Score = 43.4 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 52/192 (27%), Gaps = 14/192 (7%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVET----LSFDYGQRNKVELECRLCV 56
           + +++ +    ++L+S G+DS+  L  A   F         L  D   + +   E R   
Sbjct: 18  LREVVAETEKPVMLYSVGKDSAVMLHLAKKAFFPARPPFPLLHVDTTWKFRAMYELRKRA 77

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
            ++           L          LG       +++  M   +         G +  F 
Sbjct: 78  AEEAGM-------ELIVHRNPEAEALGINPFDHGSRHTDMWKTEGLKQALTAGGFDAAFG 130

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
                         +               R +      + I+ G    V    PL    
Sbjct: 131 GARRDEEKSRAKERVFSFRSAAHGWDPKAQRPELWNLYNSRIHKGESIRV---FPLSNWT 187

Query: 177 KYETWKLAQDIG 188
           + + W+     G
Sbjct: 188 ELDIWQYILQEG 199


>gi|331006794|ref|ZP_08330060.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [gamma
           proteobacterium IMCC1989]
 gi|330419412|gb|EGG93812.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [gamma
           proteobacterium IMCC1989]
          Length = 426

 Score = 43.4 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 31/135 (22%), Gaps = 5/135 (3%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           + +    ++  SGG DSS        +   VE L       +     C    +  + +  
Sbjct: 57  LPQETRVMVGMSGGVDSSVTALLLQQQGYLVEGLFMKNWDEDDGTEYCS--AKDDLADAQ 114

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     H        +   +     +             +  R  I        A 
Sbjct: 115 RVCDTLGITLHT--ANFAAEYWDNVFEYFLDEYKAGRTPNPDILCNRE-IKFKVFLDYAQ 171

Query: 125 RLGITNIVIGVCETD 139
            LG   I  G     
Sbjct: 172 VLGADMIATGHYVRR 186


>gi|297529241|ref|YP_003670516.1| NAD+ synthetase [Geobacillus sp. C56-T3]
 gi|297252493|gb|ADI25939.1| NAD+ synthetase [Geobacillus sp. C56-T3]
          Length = 246

 Score = 43.4 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 19/186 (10%), Positives = 44/186 (23%), Gaps = 27/186 (14%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           A++  SGG DS+         F             +   +       K + + +   K  
Sbjct: 24  AVVGISGGIDSAVVAHLIKRAFPD----------DSLGLIMPCKSNPKDMEDALKVVKSC 73

Query: 71  LGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                ++ L         ++        +  +          R  + +     +A   G 
Sbjct: 74  GIRHLVIDLTEAHRTLFGAVEAELKAIGEWSEERARLGDANTRARLRMTTLYAVANNYGY 133

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +                        T              PL+   K E  ++ + +G
Sbjct: 134 LVVGTDNAAE---------------WHTGYFTKYGDGGVDLVPLIHFTKGEVREMGRLLG 178

Query: 189 GQDLVN 194
             + + 
Sbjct: 179 VPEEII 184


>gi|257091757|ref|YP_003165398.1| LPS biosynthesis protein WbpG [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257044281|gb|ACV33469.1| LPS biosynthesis protein WbpG [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 385

 Score = 43.4 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 42/168 (25%), Gaps = 8/168 (4%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            ++  SGG DSS     A +R   R      D G      +     +   +   +     
Sbjct: 76  CIIGLSGGLDSSYAAHVAKERMGLRPLLFHVDAGWNTNQAVGNIEKLVDGLGLALYTEVI 135

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +  E   L LA L      S   +  +          ++  R            +     
Sbjct: 136 NWEEMKDLQLAFLR-----SQIADQDLPQDAAFFSALYMFARKHRIKYVITGANFSTECC 190

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                     Y G       +I +      L     V +    +  +K
Sbjct: 191 REPEEW--GGYPGIDTTLFQSIHSRFGQRALKTFPLVDIFVYKILYQK 236


>gi|167765182|ref|ZP_02437295.1| hypothetical protein BACSTE_03568 [Bacteroides stercoris ATCC
           43183]
 gi|167696810|gb|EDS13389.1| hypothetical protein BACSTE_03568 [Bacteroides stercoris ATCC
           43183]
          Length = 517

 Score = 43.4 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 49/187 (26%), Gaps = 21/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D+G   K E +                
Sbjct: 214 DKVVLGLSGGVDSSVAAVLLNRAIGKNLTCIFVDHGMLRKDEFK---------------- 257

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                  H      L  I   +  K  A                     VF         
Sbjct: 258 ----NVLHDYECLGLNVIGVDASAKFFAELAGVTEPEKKRKIIGKGFIDVFDEEAHKIKD 313

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G    D           I++      L  + ++ +  PL  L K E  ++ +++
Sbjct: 314 VKWLAQGTIYPDCIESLSITGTVIKSHHNVGGLPEKMNLKLCEPLRLLFKDEVRRVGREL 373

Query: 188 GGQDLVN 194
           G  + + 
Sbjct: 374 GMPEHLI 380


>gi|124004644|ref|ZP_01689488.1| asparagine synthase family [Microscilla marina ATCC 23134]
 gi|123989767|gb|EAY29296.1| asparagine synthase family [Microscilla marina ATCC 23134]
          Length = 563

 Score = 43.4 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 13  LLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  SGG DSS   +        ++ T S  +G++ + EL     V ++      + 
Sbjct: 225 VFLSGGLDSSILAARVAQLSSKKIHTYSIHFGKKYRNELHYAQKVAQRYQTQHHEV 280


>gi|111074136|ref|YP_709264.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Borrelia afzelii PKo]
 gi|110891282|gb|ABH02441.1| GMP synthase [Borrelia afzelii PKo]
          Length = 511

 Score = 43.4 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 60/194 (30%), Gaps = 21/194 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +L  SGG DS  C           +  +  + G   K E        KKI+EL  +
Sbjct: 215 SKKVILGLSGGTDSLVCALLIKKAIKGNLICVFVNTGLLRKNED-------KKILELKQQ 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  +      +      +   + L      + +   +   FV     I L         L
Sbjct: 268 YDLN------IQYIDASEKFLNHLKNISDPEEKRKIIGKEFVNVFEKITLGDQNI--EYL 319

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E   S   +     I++      L  +  + +  PL    K E  ++  +
Sbjct: 320 AQGTIYSDVIE---SKSKNNASSKIKSHHNVGGLPDKMSLKLLEPLNEFFKDEIIQIGIN 376

Query: 187 IG--GQDLVNLILE 198
           +G   +DL      
Sbjct: 377 LGIKKEDLYRHPFP 390


>gi|333000695|gb|EGK20271.1| GMP synthase [Shigella flexneri VA-6]
          Length = 525

 Score = 43.4 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 49/183 (26%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVLDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                         L 
Sbjct: 285 IVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEE-----------AQKLEDVKWLA 333

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I   V E+  S         I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 334 QGTIYPDVIESAASATGKAHV--IKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|324513981|gb|ADY45719.1| Asparagine synthetase [glutamine-hydrolyzing] [Ascaris suum]
          Length = 413

 Score = 43.4 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 41/168 (24%), Gaps = 2/168 (1%)

Query: 13  LLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           +L SGG DSS   S A+    R  +   SF  G               + +         
Sbjct: 71  VLLSGGLDSSLVSSIAMKEMRRRNLPLRSFSIGLDANSPDVIAARCVAEFLGTEHHEFHF 130

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
             ++ I  L  L     +    +V   +    L          + L          G   
Sbjct: 131 TIQEGIECLRKLIWHLETYDVTSVRASVPMYFLSEKISSMGIKVVLSGEGADEIFGGYLY 190

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
                 +  +      R   +   +            +   + +L K 
Sbjct: 191 FHNAPSDEQFQQETIRRVRLLSTADCLRADKSCMAHALEVRVPFLDKA 238


>gi|295398455|ref|ZP_06808494.1| argininosuccinate synthase [Aerococcus viridans ATCC 11563]
 gi|294973319|gb|EFG49107.1| argininosuccinate synthase [Aerococcus viridans ATCC 11563]
          Length = 429

 Score = 43.4 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 46/178 (25%), Gaps = 8/178 (4%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRK 58
           M          LL +SGG D+S  + W  + +    V  ++ + GQ    E      V  
Sbjct: 1   MARTKADIKKVLLAYSGGLDTSVIIPWLKENYNDCEVIGMTGNVGQEEDFEFLKEKAVA- 59

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
                   + + L E+ I            +  K  +  +         +  R +     
Sbjct: 60  --CGATKLYVEDLREEFITDYIFPAIQ---AGAKYESTYLLGTAYARPLIAKRMVEIAHL 114

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
               A   G T         +          TI A     ++        +     + 
Sbjct: 115 EDCDAIVHGCTGKGNDQVRFELGIREFDPTMTIIAPWREWDILSREQAFDYAEAHNVP 172


>gi|289166919|ref|YP_003445186.1| MesJ/Ycf62 family protein [Streptococcus mitis B6]
 gi|288906484|emb|CBJ21314.1| MesJ/Ycf62 family protein [Streptococcus mitis B6]
          Length = 425

 Score = 43.4 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 23/173 (13%), Positives = 48/173 (27%), Gaps = 11/173 (6%)

Query: 6   KKAPSALLLFSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKVELECRL-CVRKKI 60
           KK    +L  SGG DS        ++  +    +     ++ QR + + E +        
Sbjct: 17  KKHAKVVLALSGGLDSMFLFKVLSTYQKELEIELILAHVNHKQRVESDWEEQKLRKLAAE 76

Query: 61  VELMPKWKDSLGED-----HILPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            EL     +  GE               ++   +  T  V     D+ +    +      
Sbjct: 77  AELPIYISNFSGEFSEARARHFRYDFFQEVMKKTGATALVTAHHADDQVETILMRLIRGT 136

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
            L + + +  +  +  I I      +             I    N    + + 
Sbjct: 137 RLRYLSGIKEKQVVGEIEIIRPFLHFQKKDFPSIFHFEDISNKKNHYFRNRIR 189


>gi|262281331|ref|ZP_06059112.1| GMP synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262257157|gb|EEY75894.1| GMP synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 522

 Score = 43.4 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 51/189 (26%), Gaps = 19/189 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPK 66
              LL  SGG DSS   +       D++  +  D G  R     +      + +      
Sbjct: 225 EKVLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRLNEGDQVMQMFAENMG----- 279

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     +  A   +   ++L   V  + +   +   F+                  
Sbjct: 280 --------IRVIRADAEERFLTALAGEVDPEKKRKIIGREFIEVFAEEARKLDGVKFLAQ 331

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G           + +     +   I++      L  +    +  PL  L K E  KL   
Sbjct: 332 GTIY----PDVIESAASKQGKAHVIKSHHNVGGLPDDLEFELVEPLRDLFKDEVRKLGTT 387

Query: 187 IGGQDLVNL 195
           +G    +  
Sbjct: 388 LGLPHSMIY 396


>gi|254463160|ref|ZP_05076576.1| glutamine-dependent NAD(+) synthetase [Rhodobacterales bacterium
           HTCC2083]
 gi|206679749|gb|EDZ44236.1| glutamine-dependent NAD(+) synthetase [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 557

 Score = 43.4 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 51/186 (27%), Gaps = 13/186 (6%)

Query: 1   MNDIIKKA--PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCV 56
           + D + K      LL  SGG DS+   + A+D    + V  +       ++  L+     
Sbjct: 280 LRDYMSKTGFKKVLLGMSGGIDSALVATIAVDALGGENVRCVMLPSEYTSQGSLDDAKDC 339

Query: 57  RKKIVELMPKWKDSLGEDHILP-LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
            ++I         S G D I   LA L +   + +T+          L          + 
Sbjct: 340 AERIGAEYNFVPISEGRDAITNTLAPLFEGLEADVTEENIQSRLRGLLLMAMSNKFGSML 399

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
           L         +G   I   +           +          +          H   M  
Sbjct: 400 LTTGNKSEVAVGYATIYGDMSGGYNPIKDMYKV--------RVFEVCRWRNENHFEWMMG 451

Query: 176 KKYETW 181
            K E  
Sbjct: 452 PKGEVV 457


>gi|205814822|sp|B2S125|MNMA_BORHD RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 354

 Score = 43.4 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 62/215 (28%), Gaps = 8/215 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDR-VETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              +L SGG DSS  L   + +  + ++         +++         + I  +     
Sbjct: 2   KIAVLLSGGVDSSVALYTMIQKGYKNIKCYYLKIWLEDELSYIGECPWEEDINYVEAVCT 61

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                  I+ L    +     +T  +      N         + I F  F   +     +
Sbjct: 62  KFNVPYEIISLQD--EYYKRVVTYAIEELKIGNTPSPDIFCNQRIKFGAFFDKINEHYDL 119

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLAQ 185
                     + + +   +    +  + +  L   S   +   H PL  L K E  ++A 
Sbjct: 120 IVTGHYAKIENKNNHYILKQAKDKIKDQSYFLSHLSREQISKLHFPLGDLLKTEIRQIAH 179

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNS 220
            I   +      +    C+LGK        Y    
Sbjct: 180 KIDLPNKNRKDSQGI--CFLGKIKYDEFIKYHLGE 212


>gi|197334782|ref|YP_002156773.1| tRNA(Ile)-lysidine synthase [Vibrio fischeri MJ11]
 gi|197316272|gb|ACH65719.1| tRNA(Ile)-lysidine synthase [Vibrio fischeri MJ11]
          Length = 456

 Score = 43.4 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 5/54 (9%)

Query: 7  KAPSALLLFSGGQDSSTCL----SWALDRFDRVETLSFDYG-QRNKVELECRLC 55
          K P  ++  SGG DS   L     +A ++      +  ++G  ++  + E    
Sbjct: 30 KKPHLIVALSGGVDSMVLLRLAGMYAKEKQLECMAVHVNHGLSKHASDWEVSCA 83


>gi|187924407|ref|YP_001896049.1| GMP synthase [Burkholderia phytofirmans PsJN]
 gi|226738408|sp|B2T5G8|GUAA_BURPP RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|187715601|gb|ACD16825.1| GMP synthase, large subunit [Burkholderia phytofirmans PsJN]
          Length = 527

 Score = 43.4 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 56/181 (30%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D+G    + L     V     + +     
Sbjct: 225 VILGLSGGVDSSVAAALLHRAIGDQLTCVFVDHG---LLRLNEAEQVMATFADHLGVKVI 281

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +    +    + G     +  K +  +  +                    T A  L   
Sbjct: 282 HVDASEVFLRKLAGVTDPEAKRKIIGAEFVEVFQAE-----------AGRLTDAKWLAQG 330

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+   G       TI++      L    ++ +  PL  L K E  +L   +G 
Sbjct: 331 TIYPDVIESAGKGKK--GAQTIKSHHNVGGLPETLNLKLLEPLRELFKDEVRELGVKLGL 388

Query: 190 Q 190
            
Sbjct: 389 P 389


>gi|78047602|ref|YP_363777.1| tRNA-specific 2-thiouridylase MnmA [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|123585152|sp|Q3BTY6|MNMA_XANC5 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|78036032|emb|CAJ23723.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Xanthomonas campestris pv. vesicatoria str. 85-10]
          Length = 378

 Score = 43.4 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 45/188 (23%), Gaps = 11/188 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            P  +L  SGG DSS        + + +  L       +          R+  V +    
Sbjct: 3   TPRIVLGVSGGVDSSVAAWKLAQQGEPIAGLFMQNWADDGSGDCRAEDDRRDAVAVCGVL 62

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                               + +  +   +      PN  V     +        A  LG
Sbjct: 63  GIP------FHFRDFSGEYWNGVFAHFLAEYAAGRTPNPDVLCNREVKFKHFLDAAQALG 116

Query: 128 ITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
              I  G            R                 LG         P+  L+K    +
Sbjct: 117 AERIATGHYAQVAHRGGRWRLLRGADRGKDQSYFLHQLGQAQLAATLFPIGDLEKSTLRR 176

Query: 183 LAQDIGGQ 190
           +AQD G  
Sbjct: 177 IAQDAGLP 184


>gi|319787017|ref|YP_004146492.1| GMP synthase, large subunit [Pseudoxanthomonas suwonensis 11-1]
 gi|317465529|gb|ADV27261.1| GMP synthase, large subunit [Pseudoxanthomonas suwonensis 11-1]
          Length = 522

 Score = 43.4 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 51/181 (28%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D G     E +              +   
Sbjct: 227 VILGLSGGVDSSVVAALLHKAIGDQLTCVFVDTGLLRWQEGD--------------QVMA 272

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +  E   + +  +              + +        +              A  L   
Sbjct: 273 TFAEHLGVKVIRVDAADRYFKALEGVSEPEAKRKIIGNLFVDIFEEESARLKNARWLAQG 332

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S     +   I++      L     + +  PL  L K E  +L  ++G 
Sbjct: 333 TIYPDVIESAGS--KTGKAHVIKSHHNVGGLPEHMKLGLVEPLRELFKDEVRRLGVELGL 390

Query: 190 Q 190
            
Sbjct: 391 P 391


>gi|257126811|ref|YP_003164925.1| GMP synthase [Leptotrichia buccalis C-1013-b]
 gi|257050750|gb|ACV39934.1| GMP synthase, large subunit [Leptotrichia buccalis C-1013-b]
          Length = 514

 Score = 43.4 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 48/185 (25%), Gaps = 15/185 (8%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            LL  SGG DSS       +    ++  +  D G            + +K  +   K  +
Sbjct: 217 VLLALSGGVDSSVAAVLINNAIGHQLTCMFVDTG------------LLRK--DEGKKVLE 262

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E   L +  +              + +                 +            
Sbjct: 263 YYKEHFDLNIVFVDAKDRFLNKLKGIDEPEAKRKIIGNEFIEVFNEEIRKLKGQEGAKFL 322

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                  +   S        TI++      L  +    +  PL  L K E  K+  ++G 
Sbjct: 323 AQGTIYPDVIESQSIKGPSHTIKSHHNVGGLPEDLQFELLEPLKELFKDEVRKVGHELGL 382

Query: 190 QDLVN 194
            D + 
Sbjct: 383 PDTII 387


>gi|146304735|ref|YP_001192051.1| argininosuccinate synthase [Metallosphaera sedula DSM 5348]
 gi|172046953|sp|A4YI75|ASSY_METS5 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|145702985|gb|ABP96127.1| argininosuccinate synthase [Metallosphaera sedula DSM 5348]
          Length = 391

 Score = 43.4 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 31/68 (45%), Gaps = 6/68 (8%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRN-----KVELECRLCVRKKIVEL 63
            +L +SGG D++  + W  + F   V ++S D GQ++     +         +  +V+ 
Sbjct: 2  KIVLAYSGGLDTTVAIKWLSETFHAEVISVSVDVGQKDDFKKIEERAYKAGSAKHYLVDA 61

Query: 64 MPKWKDSL 71
            ++ ++ 
Sbjct: 62 KREFAENF 69


>gi|21228898|ref|NP_634820.1| hypothetical protein MM_2796 [Methanosarcina mazei Go1]
 gi|20907428|gb|AAM32492.1| conserved protein [Methanosarcina mazei Go1]
          Length = 302

 Score = 43.4 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 51/154 (33%), Gaps = 21/154 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYGQRNKVELECRLCVRKK 59
           IKK     +  SGG+DSS  L             ++  +S D G  +    +        
Sbjct: 46  IKKNDVIAVALSGGKDSSVALYIMHKILGDRPDIQIVAISVDEG-IHGYRPQS------- 97

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
            +EL  +  ++LG  HI+         H +    +A+  ++    +     R  I     
Sbjct: 98  -LELAKQLTEALGVRHIIKS---FKDEHGATMDELAVMDREKGTCSYCGVLRKSILNRV- 152

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRA 153
              A  +G T +V G    D +      H     
Sbjct: 153 ---AIEIGATKLVTGHNLDDEAQTILLNHFRGDM 183


>gi|320667595|gb|EFX34510.1| GMP synthase [Escherichia coli O157:H7 str. LSU-61]
          Length = 525

 Score = 43.4 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVLDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IVHIPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|237739593|ref|ZP_04570074.1| bifunctional GMP synthase/glutamine amidotransferase [Fusobacterium
           sp. 2_1_31]
 gi|229423201|gb|EEO38248.1| bifunctional GMP synthase/glutamine amidotransferase [Fusobacterium
           sp. 2_1_31]
          Length = 512

 Score = 43.4 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 53/187 (28%), Gaps = 18/187 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +        ++  +  D G    +  +    V +   +    
Sbjct: 215 NKQVILGLSGGVDSSVAAALINKAIGKQLTCIFVDTG---LLRKDEAKQVMEVYAKNFNM 271

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +  +    L+ L  ++     + +  K                 FL         +
Sbjct: 272 NIKCVNAEERF-LSKLAGVTDPETKRKIIGKEFVEVFNEEAKKIEGAEFLAQGTIYPDVI 330

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                         S        TI++      L  +    +  PL  L K E  K+ ++
Sbjct: 331 E-------------SVSVKGPSVTIKSHHNVGGLPEDLKFELLEPLRELFKDEVRKVGRE 377

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 378 LGIPDYM 384


>gi|225378572|ref|ZP_03755793.1| hypothetical protein ROSEINA2194_04240 [Roseburia inulinivorans DSM
           16841]
 gi|225209586|gb|EEG91940.1| hypothetical protein ROSEINA2194_04240 [Roseburia inulinivorans DSM
           16841]
          Length = 410

 Score = 43.4 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 52/212 (24%), Gaps = 24/212 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L +SGG D++  + W  +     V     D GQ             +++  L  
Sbjct: 1   MKEKVILAYSGGLDTTAIIPWLKETYGYEVICCCVDCGQ------------EEELNGLDE 48

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           + K S G   +    I+ +     +   V       N                   +A +
Sbjct: 49  RAKLS-GASKLYIEDIVDEFCDDYIVPCVQANAVYENKYLLGTSMARPGIAKKLVEIARK 107

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G T I  G                  A +  I                  + +      
Sbjct: 108 EGATAICHGATGKGNDQIRFELSIKALAPDLKIIAPWRDSNWKLQ-----SRQDEIDFCT 162

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
             G     ++      + Y   R+  +    G
Sbjct: 163 AHGIHLPFSVD-----SSYSRDRNLWHISHEG 189


>gi|149197526|ref|ZP_01874577.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Lentisphaera araneosa HTCC2155]
 gi|149139544|gb|EDM27946.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Lentisphaera araneosa HTCC2155]
          Length = 598

 Score = 43.4 bits (100), Expect = 0.030,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 55/187 (29%), Gaps = 15/187 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL SGG DS+   +        + V  L  D G   K E        K+       
Sbjct: 211 KKVFLLVSGGVDSNVAFALLNKALGDENVYGLHVDNGLMRKDESAWVKEELKQAG----- 265

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   H++        + + +++  A ++   +           +        ++ L
Sbjct: 266 ----FSNFHVVDAGDTFLKNLAGVSEPQAKRVIIGDTFLDVKC--EAVEESDLVDDSWLL 319

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   I     E+  +            ++    L  +    V  PL  L K E  +L + 
Sbjct: 320 GQGTIYPDTIESGGTENSHLIKTHHNRVDRIQELINQGK--VIEPLAELYKDEVRELGEL 377

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 378 LGLPHKL 384


>gi|257075676|ref|ZP_05570037.1| putative ATPase [Ferroplasma acidarmanus fer1]
          Length = 209

 Score = 43.4 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 55/200 (27%), Gaps = 25/200 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRV----------ETLSFDYGQRNKVELECRLCVRKK 59
            A+ LFSGG+DS      A+++   +           ++ F Y      E    L     
Sbjct: 2   KAVALFSGGKDSFLSAMMAVEQGYEIIYGVTVVPEEYSMMFHYPNSRISEYAASLLGFSI 61

Query: 60  IVELMPKWKDSLGEDHI--LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI---- 113
                  ++  LGE     +   I G I+       +     D +        R      
Sbjct: 62  KYINEKDYRSYLGEICRNGIDAIITGAIASDYQKTRIERACYDTDTIIYSPLWRKNQECI 121

Query: 114 --------IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH 165
                   I  +  +  A  LG  ++   +    +             I           
Sbjct: 122 IDQLILRDIRAMIVSVSAEGLGEGDLGATIDRDYFQHLKYINGKYGINIAGEGGEYETFV 181

Query: 166 VTVHTPLMW-LKKYETWKLA 184
             +    +  LKK + WK +
Sbjct: 182 YGLGNMEIHGLKKEKIWKNS 201


>gi|87301094|ref|ZP_01083935.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Synechococcus sp. WH 5701]
 gi|87284062|gb|EAQ76015.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Synechococcus sp. WH 5701]
          Length = 376

 Score = 43.4 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 56/199 (28%), Gaps = 21/199 (10%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           M     +   A+ L SGG DSS   +  +    +VE L+        +      C  + +
Sbjct: 1   MRAWPGEHRVAVGL-SGGVDSSLTAALLVAAGWQVEGLTL------WLMSGKGACCAEGL 53

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           V+     +      H++      +     + + +    +    P         +      
Sbjct: 54  VDAAGLCEQLGVPHHVVDS---RERFREQIVEFLVQGYEGGVTPLPCSRCNREVKFTPML 110

Query: 121 TLAY-RLGITNIVIGVCETDYSGYPDCR----------HDTIRAIETAINLGMESHVTVH 169
             A   LGI+ I  G            R                     +L       + 
Sbjct: 111 EWAEAELGISRIATGHYARVRLADAGARAGRHQLLRGLDVHKDQSYFLYDLPQAVLARLV 170

Query: 170 TPLMWLKKYETWKLAQDIG 188
            PL  L K +T   A+ +G
Sbjct: 171 FPLGELTKPDTRLEAEALG 189


>gi|86138375|ref|ZP_01056949.1| GMP synthase [Roseobacter sp. MED193]
 gi|85824900|gb|EAQ45101.1| GMP synthase [Roseobacter sp. MED193]
          Length = 538

 Score = 43.4 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 59/183 (32%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS       +   D++  +  D+G   K E        +++V +    
Sbjct: 241 KKVICGLSGGVDSSVTAVLLHEAIGDQLTCVFVDHGLLRKGE-------AEEVVTMFRDN 293

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +            LG++   S   +   K +        V  ++   +  A  LA    
Sbjct: 294 YNMQFIHADEQDLFLGELEGQS---DPETKRKIIGKLFIDVFQKHANTIDGAEFLAQGTL 350

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +++  V  +             ++      L  +  + +  PL  L K E   L +++
Sbjct: 351 YPDVIESVSFSGGPSVTI------KSHHNVGGLPEKMGLKLVEPLRELFKDEVRALGREL 404

Query: 188 GGQ 190
           G  
Sbjct: 405 GLP 407


>gi|319952511|ref|YP_004163778.1| argininosuccinate synthase [Cellulophaga algicola DSM 14237]
 gi|319421171|gb|ADV48280.1| argininosuccinate synthase [Cellulophaga algicola DSM 14237]
          Length = 395

 Score = 43.4 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 56/190 (29%), Gaps = 6/190 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE--LMP 65
              +L +SGG D+S C      D+   V  +S + G  +K E+        ++       
Sbjct: 2   KKLVLAYSGGLDTSYCAKHLSKDKGFEVHAVSVNTGGFSKEEISQIEKKSLELGATSYKS 61

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                   D ++   I G++  +  T  +++  +        V     +   + A  +  
Sbjct: 62  IDAVQTFYDKVVKYLIFGNVLKN-NTYPLSVSAERIVQAIEIVNYAKKVDAKYIAHGSTG 120

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK--L 183
            G   +   +     +   +          +                    KY   +   
Sbjct: 121 AGNDQVRFDMIFQIIAPEIEIITPIRDNKLSRETEIAYLKENGIDYPWEKAKYSINRGLW 180

Query: 184 AQDIGGQDLV 193
              +GG++ +
Sbjct: 181 GTSVGGEETL 190


>gi|307610418|emb|CBW99988.1| hypothetical protein LPW_17451 [Legionella pneumophila 130b]
          Length = 525

 Score = 43.4 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 48/185 (25%), Gaps = 16/185 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS   +       +++  +  D G    + L     V       M  
Sbjct: 226 TEKVLLGLSGGVDSSVVAALLHRAIGEQLVCVFVDTG---LLRLNEAEQVLSMFGRHMGI 282

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              ++  +     A+ G        K +     +                          
Sbjct: 283 RIIAVNAEDKFLTALKGVTCPEEKRKIIGRTFIEVFDEEAQKLADIKWL----------- 331

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                +        +   +     I++      L    ++ +  P+  L K E  ++  +
Sbjct: 332 -AQGTIYPDVIESAATSTNDAAVVIKSHHNVGGLPDTLNLKLLEPIRELFKDEVRQVGLE 390

Query: 187 IGGQD 191
           +G   
Sbjct: 391 LGLPH 395


>gi|119433784|gb|ABL74944.1| Tlm Orf21 [Streptoalloteichus hindustanus]
          Length = 628

 Score = 43.4 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 1/56 (1%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            SGG DS++ ++ A  R D V   +  +      E E      +++     +    
Sbjct: 265 LSGGLDSTSVVATA-ARHDTVTAFTVRFDDPAYDESEVAERTARRLGVRHHQIDSH 319


>gi|56421131|ref|YP_148449.1| NH(3)-dependent NAD+ synthetase [Geobacillus kaustophilus HTA426]
 gi|261418389|ref|YP_003252071.1| NAD+ synthetase [Geobacillus sp. Y412MC61]
 gi|319767652|ref|YP_004133153.1| NAD+ synthetase [Geobacillus sp. Y412MC52]
 gi|56380973|dbj|BAD76881.1| NH(3)-dependent NAD+ synthetase [Geobacillus kaustophilus HTA426]
 gi|261374846|gb|ACX77589.1| NAD+ synthetase [Geobacillus sp. Y412MC61]
 gi|317112518|gb|ADU95010.1| NAD+ synthetase [Geobacillus sp. Y412MC52]
          Length = 246

 Score = 43.4 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 19/186 (10%), Positives = 44/186 (23%), Gaps = 27/186 (14%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           A++  SGG DS+         F             +   +       K + + +   K  
Sbjct: 24  AVVGISGGIDSAVVAHLIKRAFPD----------DSLGLIMPCKSNPKDMEDALKVVKSC 73

Query: 71  LGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                ++ L         ++        +  +          R  + +     +A   G 
Sbjct: 74  GIRHLVIDLTEAHRTLFGAVEAELKAIGEWSEERARLGDANTRARLRMTTLYAVANNYGY 133

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +                        T              PL+   K E  ++ + +G
Sbjct: 134 LVVGTDNAAE---------------WHTGYFTKYGDGGVDLVPLIHFTKGEVREMGRLLG 178

Query: 189 GQDLVN 194
             + + 
Sbjct: 179 VPEEII 184


>gi|262306057|gb|ACY45621.1| gln amidotransferase [Ischnura verticalis]
          Length = 197

 Score = 43.4 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 22/59 (37%), Gaps = 2/59 (3%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            LLL SGG DS+ C +          + T+  D G   K +        KKI   +   
Sbjct: 46  VLLLASGGVDSTVCAALLRKAIPEDQLITVHIDNGFMRKNDRSDVDQTLKKICPKLKII 104


>gi|317049125|ref|YP_004116773.1| GMP synthase large subunit [Pantoea sp. At-9b]
 gi|316950742|gb|ADU70217.1| GMP synthase, large subunit [Pantoea sp. At-9b]
          Length = 526

 Score = 43.4 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 50/184 (27%), Gaps = 17/184 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS           DR+  +  D G    + L     V +   +    
Sbjct: 228 EDKVILGLSGGVDSSVTAMLLHRAIGDRLTCVFVDNG---LLRLNEAEQVLEMFGDHFGL 284

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +  +     A+ G+    +  K +     +                          
Sbjct: 285 NIVHVAAEARFLEALAGENDPEAKRKIIGRVFVEVFDEEAGKLTDVKWLAQGT------- 337

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                 I     + +     +   I++      L  E  + +  PL  L K E  K+  +
Sbjct: 338 ------IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKLGLVEPLKELFKDEVRKIGLE 391

Query: 187 IGGQ 190
           +G  
Sbjct: 392 LGLP 395


>gi|222148504|ref|YP_002549461.1| NAD synthetase [Agrobacterium vitis S4]
 gi|221735490|gb|ACM36453.1| NAD synthetase [Agrobacterium vitis S4]
          Length = 559

 Score = 43.4 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 46/146 (31%), Gaps = 4/146 (2%)

Query: 10  SALLL-FSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +++L  SGG DS+ C + A+D    +RV T+   Y   ++   +      K +      
Sbjct: 293 KSVVLGLSGGIDSAICAAMAVDALGHERVRTIMLPYRYTSEESFKDAADCAKALGCHYDI 352

Query: 67  WKDS-LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
              S   E  +  LA + + + S +T+          +          + +         
Sbjct: 353 VPISEPVEGFLASLADMFEGTESGITEENLQSRTRGTILMAVSNKFGSMVVTTGNKSEMS 412

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTI 151
           +G   +   +           +    
Sbjct: 413 VGYATLYGDMNGGFNPIKDLYKMQVY 438


>gi|217077779|ref|YP_002335497.1| NAD synthetase [Thermosipho africanus TCF52B]
 gi|217037634|gb|ACJ76156.1| glutamine-dependent NAD+ synthetase [Thermosipho africanus TCF52B]
          Length = 576

 Score = 43.4 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 50/180 (27%), Gaps = 26/180 (14%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR--FDRVETLSF--DYGQRNKVELECRLCVRKKIVELM 64
              L+  SGG DSS   + A++      V  +     Y   + +E        KK+ E +
Sbjct: 317 KKVLIGLSGGMDSSLVAAIAVEALGNKNVVGILMPSMYSSSHSIED------AKKLAENL 370

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                   E HI+ ++ +     +SL        +D    N     R  + +  +     
Sbjct: 371 E------IEYHIIKISDIYYSFKNSLKDIFKGTSEDITEENLQARIRGTLLMAVS----- 419

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY---ETW 181
                  ++                    +     +       V+    W  K+   E  
Sbjct: 420 --NKFGYIVLATGNKSEIATGYSTLYGDMVGGFSPIKDIYKTDVYKIARWYNKFKGKEII 477


>gi|226246782|ref|YP_002776106.1| GMP synthase [Borrelia burgdorferi Bol26]
 gi|226202210|gb|ACO37880.1| GMP synthase [Borrelia burgdorferi Bol26]
          Length = 511

 Score = 43.4 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 56/187 (29%), Gaps = 19/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DS  C         + +  +  + G   K E        KKI+EL  +
Sbjct: 215 NKKVILGLSGGTDSLVCALLIKKAINENLICVFVNTGLLRKNED-------KKILELKHQ 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  +      +          + L      + +   +   FV     I L         L
Sbjct: 268 YDLN------IKYIDASTKFLNRLKNISDPEEKRKIIGKEFVNVFEKITLEDQNI--EYL 319

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+            I++      L    ++ +  PL    K E  ++  +
Sbjct: 320 AQGTIYSDVIESKSKNSS---SSKIKSHHNVGGLPDNMNLKLLEPLNEFFKDEIIQIGIN 376

Query: 187 IGGQDLV 193
           +G +   
Sbjct: 377 LGIKKES 383


>gi|218203985|ref|YP_002364845.1| GMP synthase [Borrelia burgdorferi ZS7]
 gi|218165351|gb|ACK75405.1| GMP synthase [Borrelia burgdorferi ZS7]
          Length = 511

 Score = 43.4 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 53/187 (28%), Gaps = 19/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +L  SGG DS  C         + +  +  + G   K E        KKI+EL  +
Sbjct: 215 SKKVILGLSGGTDSLVCALLIKKAINENLICVFVNTGLLRKNED-------KKILELKHQ 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  ++         +    + S   +   +  ++       +   +      A    Y  
Sbjct: 268 YDLNIKFIDASIKFLNRLKNISDPEEKRKIIGKEFVDVFEKITLEDQNIEYLAQGTIYSD 327

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I +       +    + +      +     +    E             K E  ++  +
Sbjct: 328 VIESKSKDSSSSKIKSHHNVGGLPDKMSLKLLEPLNEFF-----------KDEIIQIGIN 376

Query: 187 IGGQDLV 193
           +G +   
Sbjct: 377 LGIKKES 383


>gi|218779733|ref|YP_002431051.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Desulfatibacillum alkenivorans AK-01]
 gi|218761117|gb|ACL03583.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Desulfatibacillum alkenivorans AK-01]
          Length = 356

 Score = 43.4 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 53/189 (28%), Gaps = 13/189 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            A    +  SGG DS             +  + F  G  N+        V + +     +
Sbjct: 1   MASRIAIAMSGGVDSMISAYLLKQTCRDMVGIHFITGFENEGAPPGPDGVPEPLARASKE 60

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKN-VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  D  + +  L +  H+ +    V   ++        V  R + F         R
Sbjct: 61  L------DLPIEVVNLQEEFHTHVVAPFVDTYLKGRTPNPCMVCNRTVKFGALLDAARNR 114

Query: 126 LGITNIVIGVCET---DYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL---KKYE 179
                I  G       D +G            + +  LG  S   +   +  L    K +
Sbjct: 115 FNAEKIATGHYARVRPDSAGRFRLVKGADLKKDQSYFLGFLSQAQLGAAVFPLGEFTKDQ 174

Query: 180 TWKLAQDIG 188
             + A ++G
Sbjct: 175 IREKAVELG 183


>gi|163785972|ref|ZP_02180420.1| hypothetical protein FBALC1_12342 [Flavobacteriales bacterium
           ALC-1]
 gi|159877832|gb|EDP71888.1| hypothetical protein FBALC1_12342 [Flavobacteriales bacterium
           ALC-1]
          Length = 220

 Score = 43.4 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 21/215 (9%), Positives = 60/215 (27%), Gaps = 15/215 (6%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR--NKVELECRLCVRKKIVELMPKWKDS 70
           +L++GG DS+  +         ++T+     +R  +  E+E    + +K      +    
Sbjct: 7   VLWTGGWDSTFRVIQLYRLGATIQTIYIIDQKRKSSNKEIEVINSLAEKTPLHFNQSNGH 66

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           +     +    +       +   +  +         ++            +        +
Sbjct: 67  ILPIKYIKRENIPYNLFLKVIHKILRRQVGLGKQYYWLASFAQKHKNLDVSFHKED--LD 124

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
                 +       +   +     +    L  +    +  PL+ + K E     + I  +
Sbjct: 125 KFFSEEQLIEIKDDNFGSNWKINPKKVGFLRRQLFKNMTFPLITVTKPE----MKFIAEE 180

Query: 191 DLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACY 225
           +    ++E +  C+             C  C  C 
Sbjct: 181 NNFIELMELTWFCHKSTDKP-------CGKCAPCK 208


>gi|114777702|ref|ZP_01452662.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Mariprofundus ferrooxydans PV-1]
 gi|114551918|gb|EAU54452.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Mariprofundus ferrooxydans PV-1]
          Length = 515

 Score = 43.4 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 53/181 (29%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       +++  +  D G    + L     V +   + +     
Sbjct: 220 VILGLSGGVDSSVAAALLHRAIGEQLTCVFVDNG---LLRLHEAEQVMQTFADNLGVKVI 276

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +         + G     +  K +  +  +                      A  L   
Sbjct: 277 HVDASDEFLKHLAGVTDPEAKRKIIGREFVEVFQQE-----------SAKLPQARWLAQG 325

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S         I++      L    H+ +  PL  L K E  +L   +G 
Sbjct: 326 TIYPDVIESAGSKTKKAHT--IKSHHNVGGLPDTLHLKLLEPLRELFKDEVRELGVALGL 383

Query: 190 Q 190
            
Sbjct: 384 P 384


>gi|90021107|ref|YP_526934.1| GMP synthase [Saccharophagus degradans 2-40]
 gi|89950707|gb|ABD80722.1| GMP synthase (glutamine-hydrolyzing) [Saccharophagus degradans
           2-40]
          Length = 542

 Score = 43.4 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 53/184 (28%), Gaps = 19/184 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPK 66
              LL  SGG DSS   +       D++  +  D G  R     +      K +   + +
Sbjct: 245 DKVLLGLSGGVDSSVVAALLHKAIGDKLTCVFVDNGLLRKNEGDQVMDMFAKNMGVKVIR 304

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +      L L  L   S     + +      +         +++ +L          
Sbjct: 305 ADAAD-----LFLGNLAGESDPEKKRKIIGNTFIDIFDQEASKLKDVKWLAQGTIY---- 355

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                       + +     +   I++      L  +    +  PL  L K E  K+  +
Sbjct: 356 --------PDVIESAASKTGKAHVIKSHHNVGGLPEDMQFELVEPLRELFKDEVRKIGLE 407

Query: 187 IGGQ 190
           +G  
Sbjct: 408 LGLP 411


>gi|148747576|ref|NP_037211.2| asparagine synthetase [glutamine-hydrolyzing] [Rattus norvegicus]
 gi|91771192|sp|P49088|ASNS_RAT RecName: Full=Asparagine synthetase [glutamine-hydrolyzing];
           AltName: Full=Glutamine-dependent asparagine synthetase
 gi|51859420|gb|AAH81719.1| Asns protein [Rattus norvegicus]
 gi|149064974|gb|EDM15050.1| asparagine synthetase, isoform CRA_b [Rattus norvegicus]
 gi|1587645|prf||2207183A Asn synthetase
          Length = 561

 Score = 43.4 bits (100), Expect = 0.031,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 4/62 (6%)

Query: 13  LLFSGGQDSSTCLSWALDRFDR---VETL-SFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            L SGG DSS   +  L +         L +F  G  +  +L     V   I     +  
Sbjct: 255 CLLSGGLDSSLVAASLLKQLKEAQVPYALQTFAIGMEDSPDLLAARKVANYIGSEHHEVL 314

Query: 69  DS 70
            +
Sbjct: 315 FN 316


>gi|256830660|ref|YP_003159388.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
          [Desulfomicrobium baculatum DSM 4028]
 gi|256579836|gb|ACU90972.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
          [Desulfomicrobium baculatum DSM 4028]
          Length = 347

 Score = 43.0 bits (99), Expect = 0.031,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 25/81 (30%), Gaps = 2/81 (2%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY-GQRNKVELECRLCVRKKIVELMP 65
             +A+ L SGG DS   L    +    V  +   + G  ++   E    +  K+     
Sbjct: 1  MHKTAIAL-SGGADSLMSLLLLRETGAEVMAVHARFLGADDEALHERLHGLCAKLRVPFH 59

Query: 66 KWKDSLGEDHILPLAILGDIS 86
                  + ++    +    
Sbjct: 60 LVDLRREFEELVIAPFVRAYQ 80


>gi|237737754|ref|ZP_04568235.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium mortiferum ATCC
           9817]
 gi|229419634|gb|EEO34681.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium mortiferum ATCC
           9817]
          Length = 273

 Score = 43.0 bits (99), Expect = 0.031,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 58/216 (26%), Gaps = 27/216 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              +L  SGG DS+     A   F  + V  +   Y   +K  +E    V +K       
Sbjct: 29  KKVVLGLSGGIDSALVAFLAAKAFGPENVLGIMMPYKTSSKESVEHAKLVIEKTGIRSKL 88

Query: 67  WKDSLGEDHIL----PLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
            + +   D        ++ L   +  +  +   +           +   N   L+     
Sbjct: 89  VEITPMVDAYFAMNPDMSSLRKGNKMARERMSILFDHSAAENALVLGTSNKTELLLGYGT 148

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHD----------------TIRAIETAINLGMESHV 166
            +    + I           +   RH                   +  E  +        
Sbjct: 149 QFGDSASAINAIGDLYKTHVWDLSRHMGVPNELIDKKPSADLWEGQTDEQELGYSYRMAD 208

Query: 167 TVHTPLMWLKK--YETWKLAQDIGGQDLVNLILEES 200
            +    +  +K   E  K       Q++V  I++ +
Sbjct: 209 EILYRYVEERKTIDEIVKEGY---PQEVVEKIIKRT 241


>gi|188585053|ref|YP_001916598.1| PP-loop domain protein [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179349740|gb|ACB84010.1| PP-loop domain protein [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 313

 Score = 43.0 bits (99), Expect = 0.031,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 2/60 (3%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR--NKVELECRLCVRKKI 60
            ++      ++  SGG+DS       LDR  + +    D G    +K  +E      +K+
Sbjct: 42  KMLPPNEKVIVAISGGKDSLALWDMLLDRGYKADAFYIDLGIDEYSKTSMEKAQSFAEKV 101


>gi|124027539|ref|YP_001012859.1| phosphoadenosine 5'-phosphosulfate reductase [Hyperthermus
           butylicus DSM 5456]
 gi|123978233|gb|ABM80514.1| phosphoadenosine 5'-phosphosulfate reductase [Hyperthermus
           butylicus DSM 5456]
          Length = 660

 Score = 43.0 bits (99), Expect = 0.031,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
            ++  SGG+DS+   + A+    R     FD G      +E    V + + 
Sbjct: 246 VMVAVSGGKDSTVAAALAVKAGLR-RAYFFDTGIEFPETIETAHRVAQTLG 295


>gi|29349296|ref|NP_812799.1| tRNA-specific 2-thiouridylase MnmA [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29341204|gb|AAO78993.1| putative tRNA (5-methylaminomethyl-2-thiouridylate)
           methyltransferase [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 351

 Score = 43.0 bits (99), Expect = 0.031,   Method: Composition-based stats.
 Identities = 16/181 (8%), Positives = 41/181 (22%), Gaps = 11/181 (6%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DS+       ++   +  ++         E +    +  ++        + +   
Sbjct: 1   MSGGIDSTATCLMLQEQGYEIVGVTMRVWGD---EPQDARELAARMGIEHYVADERIPFK 57

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
             +    + +                  + N     R +         AY        + 
Sbjct: 58  ETIVKNFIDEYKQGRTPNP-------CVMCNPLFKFRVLAEWADKLDCAYIATGHYSRLE 110

Query: 135 VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVN 194
                            ++      LG +       PL    K +  +   + G +    
Sbjct: 111 ERSGHIYIVAGDDDKKDQSYF-LWRLGQDILKRCIFPLGDYTKIKVREYLAEKGYEAKSK 169

Query: 195 L 195
            
Sbjct: 170 E 170


>gi|50083437|ref|YP_044947.1| GMP synthase [Acinetobacter sp. ADP1]
 gi|81393985|sp|Q6FFN2|GUAA_ACIAD RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|49529413|emb|CAG67125.1| GMP synthetase (glutamine aminotransferase) [Acinetobacter sp.
           ADP1]
          Length = 550

 Score = 43.0 bits (99), Expect = 0.031,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 17/188 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +       D++  +  D G     E +          ++M  +
Sbjct: 253 EKVLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRLNEGD----------QVMQMF 302

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D++G    +  A   +   ++L   V  + +   +   F+                  G
Sbjct: 303 ADNMG--IRVIRADAEERFLTALAGEVDPEKKRKIIGREFIEVFAEEARKLDGVKFLAQG 360

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                      + +     +   I++      L  +    +  PL  L K E  KL   +
Sbjct: 361 TIY----PDVIESAASKQGKAHVIKSHHNVGGLPDDLEFELVEPLRDLFKDEVRKLGTTL 416

Query: 188 GGQDLVNL 195
           G    +  
Sbjct: 417 GLPHSMIY 424


>gi|333002302|gb|EGK21866.1| GMP synthase [Shigella flexneri K-272]
 gi|333016125|gb|EGK35457.1| GMP synthase [Shigella flexneri K-227]
          Length = 525

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVLDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|332087954|gb|EGI93079.1| GMP synthase [Shigella boydii 5216-82]
          Length = 525

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVLDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|326937855|gb|AEA13751.1| cell cycle protein MesJ [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 430

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 22/197 (11%), Positives = 52/197 (26%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D++K   + ++  SGG DS   L + L++                          + +V 
Sbjct: 17  DVLKNDSTIVVGVSGGPDSLALLYYLLEK--------------------RAEKQLEIVVA 56

Query: 63  LMPKW--KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +      D   ED      +  ++     T  + +                     F  
Sbjct: 57  HVDHMFRGDESHEDLQFVQDLCEELGIICETIRINVSQYQQQYGMNAQVAARECRYAFLE 116

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKK 177
            +  +     + +G    D       R       +    + ++       +  PL+ + K
Sbjct: 117 RIMKKYDARYVALGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGYLIRPLLGVTK 176

Query: 178 YETWKLAQDIGGQDLVN 194
            E       +     ++
Sbjct: 177 EEIVDYCNKLNLIPRID 193


>gi|325496463|gb|EGC94322.1| GMP synthase [Escherichia fergusonii ECD227]
          Length = 525

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVLDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|324112998|gb|EGC06974.1| GMP synthase domain-containing protein [Escherichia fergusonii
           B253]
          Length = 525

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVLDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|324011211|gb|EGB80430.1| GMP synthase protein [Escherichia coli MS 60-1]
          Length = 520

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 223 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVLDMFGDHFGLN 279

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 280 IVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 331

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 332 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 386

Query: 188 GGQ 190
           G  
Sbjct: 387 GLP 389


>gi|320200070|gb|EFW74659.1| GMP synthase [Escherichia coli EC4100B]
          Length = 525

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVLDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|320175070|gb|EFW50183.1| GMP synthase [Shigella dysenteriae CDC 74-1112]
 gi|320185207|gb|EFW59987.1| GMP synthase [Shigella flexneri CDC 796-83]
 gi|332092793|gb|EGI97862.1| GMP synthase [Shigella boydii 3594-74]
          Length = 525

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVLDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|331648201|ref|ZP_08349291.1| GMP synthase (glutamine-hydrolyzing) [Escherichia coli M605]
 gi|330912279|gb|EGH40789.1| GMP synthase (glutamine-hydrolyzing) [Escherichia coli AA86]
 gi|331043061|gb|EGI15201.1| GMP synthase (glutamine-hydrolyzing) [Escherichia coli M605]
          Length = 525

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVLDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|301024735|ref|ZP_07188376.1| GMP synthase protein [Escherichia coli MS 69-1]
 gi|300396428|gb|EFJ79966.1| GMP synthase protein [Escherichia coli MS 69-1]
          Length = 525

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVLDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|218548059|ref|YP_002381850.1| GMP synthase [Escherichia fergusonii ATCC 35469]
 gi|226738455|sp|B7LKD4|GUAA_ESCF3 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|218355600|emb|CAQ88211.1| GMP synthetase (glutamine aminotransferase) [Escherichia fergusonii
           ATCC 35469]
          Length = 525

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVLDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|215487849|ref|YP_002330280.1| GMP synthase [Escherichia coli O127:H6 str. E2348/69]
 gi|312965420|ref|ZP_07779652.1| GMP synthase [glutamine-hydrolyzing] [Escherichia coli 2362-75]
 gi|254800095|sp|B7UGU5|GUAA_ECO27 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|215265921|emb|CAS10330.1| GMP synthetase (glutamine aminotransferase) [Escherichia coli
           O127:H6 str. E2348/69]
 gi|312289840|gb|EFR17728.1| GMP synthase [glutamine-hydrolyzing] [Escherichia coli 2362-75]
          Length = 525

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVLDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|242018594|ref|XP_002429759.1| methyltransferase, putative [Pediculus humanus corporis]
 gi|212514771|gb|EEB17021.1| methyltransferase, putative [Pediculus humanus corporis]
          Length = 401

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/206 (12%), Positives = 51/206 (24%), Gaps = 18/206 (8%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +I     A+ + SGG DS+        R   V  +             C           
Sbjct: 1   MIHVKNVAVGI-SGGVDSAVAALLLKKRGYNVIGVYMKNWDLVDENGICSTS----EDLE 55

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
             K+  +  +     +  + +  ++                   +  + I F  F+    
Sbjct: 56  YAKYTCNQIDIPFHEVNFVKEYWNNVFVAFTKEYEDGYTPNPDILCNKYIKFNAFSNYAF 115

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM---------- 173
            +L    I  G       G     +      +  +   +    T     +          
Sbjct: 116 KKLRADAIATGHYAKTSFGNFLENYKPQTKAKLLVAKDIIKDQTFFLSQIPQETLKKTIF 175

Query: 174 ---WLKKYETWKLAQDIGGQDLVNLI 196
               L K E  K+A++   + L    
Sbjct: 176 PLGDLHKSEVKKIAEENDMKKLSRKP 201


>gi|170054644|ref|XP_001863223.1| argininosuccinate synthase [Culex quinquefasciatus]
 gi|167874910|gb|EDS38293.1| argininosuccinate synthase [Culex quinquefasciatus]
          Length = 411

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 2/55 (3%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
              LL +SGG D+S  L W L++   V     D GQ  + +         +I  
Sbjct: 3  QERILLAYSGGLDTSCILKWLLEKGHEVICFMADVGQ--EEDFGAAREKALRIGA 55


>gi|169611454|ref|XP_001799145.1| hypothetical protein SNOG_08840 [Phaeosphaeria nodorum SN15]
 gi|121920215|sp|Q0UHC4|GUAA_PHANO RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|111062888|gb|EAT84008.1| hypothetical protein SNOG_08840 [Phaeosphaeria nodorum SN15]
          Length = 541

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 58/196 (29%), Gaps = 13/196 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
             ++ +    +   SGG DS+       +   DR   +  D G     E        K++
Sbjct: 227 RKLVGEKGQVIGAVSGGVDSTVAAKLMKEAIGDRFHAVMVDNGVLRLNE-------AKQV 279

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            E + K         ++  + +       +T N   K +        +       +  AA
Sbjct: 280 KETLEK--GLGINLTVIDASDMFLDRLKGITDNPEQKRKVIGNTFIEIFQEKAKEIAAAA 337

Query: 121 TLAYRLGITN---IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
             +   G            +   S        TI+       L    ++ +  PL  L K
Sbjct: 338 KNSSNAGEIEWLLQGTLYPDVIESLSFKGPSQTIKTHHNVGGLPANMNLKLIEPLRELFK 397

Query: 178 YETWKLAQDIGGQDLV 193
            E   L  ++G  + +
Sbjct: 398 DEVRALGVELGIPEDL 413


>gi|82777892|ref|YP_404241.1| GMP synthase [Shigella dysenteriae Sd197]
 gi|309784742|ref|ZP_07679375.1| GMP synthase [glutamine-hydrolyzing] [Shigella dysenteriae 1617]
 gi|91206828|sp|Q32D55|GUAA_SHIDS RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|81242040|gb|ABB62750.1| GMP synthetase (glutamine-hydrolyzing) [Shigella dysenteriae Sd197]
 gi|308927112|gb|EFP72586.1| GMP synthase [glutamine-hydrolyzing] [Shigella dysenteriae 1617]
          Length = 525

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVLDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|82544956|ref|YP_408903.1| GMP synthase [Shigella boydii Sb227]
 gi|91206827|sp|Q31XY3|GUAA_SHIBS RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|81246367|gb|ABB67075.1| GMP synthetase [Shigella boydii Sb227]
          Length = 525

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVLDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|74313033|ref|YP_311452.1| GMP synthase [Shigella sonnei Ss046]
 gi|91206829|sp|Q3YZ45|GUAA_SHISS RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|73856510|gb|AAZ89217.1| GMP synthetase [Shigella sonnei Ss046]
 gi|323169049|gb|EFZ54726.1| GMP synthase [Shigella sonnei 53G]
          Length = 525

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVLDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|311977862|ref|YP_003986982.1| glutamine-dependent asparagine synthetase [Acanthamoeba polyphaga
           mimivirus]
 gi|82000152|sp|Q5UQE1|ASNS_MIMIV RecName: Full=Probable asparagine synthetase
           [glutamine-hydrolyzing]; AltName:
           Full=Glutamine-dependent asparagine synthetase
 gi|55417091|gb|AAV50741.1| asparagine synthase (glutamine hydrolysing) [Acanthamoeba polyphaga
           mimivirus]
 gi|308204856|gb|ADO18657.1| glutamine-dependent asparagine synthetase [Acanthamoeba polyphaga
           mimivirus]
          Length = 550

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 17/132 (12%), Positives = 34/132 (25%), Gaps = 3/132 (2%)

Query: 14  LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
           L SGG DSS  ++ A         + F  G     ++     V K +            +
Sbjct: 256 LLSGGLDSSLIVAIATRLLGPTNIVCFSVGFEGSPDVAAAREVVKFLGIKNHHIVPFSVD 315

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
              + L  + D+  +  T ++                +    +    +      I     
Sbjct: 316 ---IGLNAINDVIKTIETYDITTIRASTPQFIMAKYIQENTDIRVLLSGEGSDEIHGSYK 372

Query: 134 GVCETDYSGYPD 145
            +     S    
Sbjct: 373 YMRSAPNSQEFH 384


>gi|24113836|ref|NP_708346.1| GMP synthase [Shigella flexneri 2a str. 301]
 gi|30063899|ref|NP_838070.1| GMP synthase [Shigella flexneri 2a str. 2457T]
 gi|44887952|sp|Q83QL1|GUAA_SHIFL RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|24052926|gb|AAN44053.1| GMP synthetase (glutamine-hydrolyzing) [Shigella flexneri 2a str.
           301]
 gi|30042154|gb|AAP17880.1| GMP synthetase (glutamine-hydrolyzing) [Shigella flexneri 2a str.
           2457T]
 gi|281601909|gb|ADA74893.1| GMP synthase [Shigella flexneri 2002017]
 gi|313650993|gb|EFS15393.1| GMP synthase [glutamine-hydrolyzing] [Shigella flexneri 2a str.
           2457T]
 gi|332754194|gb|EGJ84562.1| GMP synthase [Shigella flexneri 4343-70]
 gi|332755557|gb|EGJ85921.1| GMP synthase [Shigella flexneri K-671]
 gi|332756627|gb|EGJ86978.1| GMP synthase [Shigella flexneri 2747-71]
 gi|332766340|gb|EGJ96550.1| guaA GMP synthetase [Shigella flexneri 2930-71]
 gi|333001731|gb|EGK21297.1| GMP synthase [Shigella flexneri K-218]
 gi|333016231|gb|EGK35562.1| GMP synthase [Shigella flexneri K-304]
          Length = 525

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVLDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|15832623|ref|NP_311396.1| GMP synthase [Escherichia coli O157:H7 str. Sakai]
 gi|26248868|ref|NP_754908.1| GMP synthase [Escherichia coli CFT073]
 gi|91211830|ref|YP_541816.1| GMP synthase [Escherichia coli UTI89]
 gi|110642669|ref|YP_670399.1| GMP synthase [Escherichia coli 536]
 gi|117624734|ref|YP_853647.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Escherichia coli APEC O1]
 gi|157161982|ref|YP_001459300.1| GMP synthase [Escherichia coli HS]
 gi|168748434|ref|ZP_02773456.1| GMP synthase [Escherichia coli O157:H7 str. EC4113]
 gi|168756279|ref|ZP_02781286.1| GMP synthase [Escherichia coli O157:H7 str. EC4401]
 gi|168761118|ref|ZP_02786125.1| GMP synthase [Escherichia coli O157:H7 str. EC4501]
 gi|168768599|ref|ZP_02793606.1| GMP synthase [Escherichia coli O157:H7 str. EC4486]
 gi|168773579|ref|ZP_02798586.1| GMP synthase (glutamine-hydrolyzing) [Escherichia coli O157:H7 str.
           EC4196]
 gi|168778473|ref|ZP_02803480.1| GMP synthase [Escherichia coli O157:H7 str. EC4076]
 gi|168787853|ref|ZP_02812860.1| GMP synthase [Escherichia coli O157:H7 str. EC869]
 gi|168798878|ref|ZP_02823885.1| GMP synthase [Escherichia coli O157:H7 str. EC508]
 gi|170019210|ref|YP_001724164.1| GMP synthase [Escherichia coli ATCC 8739]
 gi|170683481|ref|YP_001744692.1| GMP synthase [Escherichia coli SMS-3-5]
 gi|188496435|ref|ZP_03003705.1| GMP synthetase [Escherichia coli 53638]
 gi|191167662|ref|ZP_03029471.1| GMP synthase [Escherichia coli B7A]
 gi|191172898|ref|ZP_03034433.1| GMP synthase [Escherichia coli F11]
 gi|193064741|ref|ZP_03045819.1| GMP synthase [Escherichia coli E22]
 gi|193068319|ref|ZP_03049282.1| GMP synthase [Escherichia coli E110019]
 gi|194427336|ref|ZP_03059886.1| GMP synthase [Escherichia coli B171]
 gi|194432074|ref|ZP_03064363.1| GMP synthase [Shigella dysenteriae 1012]
 gi|195936649|ref|ZP_03082031.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Escherichia coli O157:H7 str. EC4024]
 gi|208808334|ref|ZP_03250671.1| GMP synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208812438|ref|ZP_03253767.1| GMP synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208819837|ref|ZP_03260157.1| GMP synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209397616|ref|YP_002271977.1| GMP synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209919984|ref|YP_002294068.1| GMP synthase [Escherichia coli SE11]
 gi|217327698|ref|ZP_03443781.1| GMP synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|218555032|ref|YP_002387945.1| GMP synthase [Escherichia coli IAI1]
 gi|218559431|ref|YP_002392344.1| GMP synthase [Escherichia coli S88]
 gi|218690622|ref|YP_002398834.1| GMP synthase [Escherichia coli ED1a]
 gi|218696134|ref|YP_002403801.1| GMP synthase [Escherichia coli 55989]
 gi|218701014|ref|YP_002408643.1| GMP synthase [Escherichia coli IAI39]
 gi|227887539|ref|ZP_04005344.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Escherichia coli 83972]
 gi|237705014|ref|ZP_04535495.1| bifunctional GMP synthase/glutamine amidotransferase [Escherichia
           sp. 3_2_53FAA]
 gi|254794453|ref|YP_003079290.1| GMP synthase [Escherichia coli O157:H7 str. TW14359]
 gi|256017345|ref|ZP_05431210.1| GMP synthase [Shigella sp. D9]
 gi|260845137|ref|YP_003222915.1| GMP synthetase [Escherichia coli O103:H2 str. 12009]
 gi|260856601|ref|YP_003230492.1| GMP synthetase [Escherichia coli O26:H11 str. 11368]
 gi|260869196|ref|YP_003235598.1| GMP synthetase [Escherichia coli O111:H- str. 11128]
 gi|261223061|ref|ZP_05937342.1| GMP synthetase (glutamine aminotransferase) [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261259388|ref|ZP_05951921.1| GMP synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|291283728|ref|YP_003500546.1| GMP synthase (glutamine-hydrolyzing) [Escherichia coli O55:H7 str.
           CB9615]
 gi|293410918|ref|ZP_06654494.1| conserved hypothetical protein [Escherichia coli B354]
 gi|293446860|ref|ZP_06663282.1| GMP synthase [Escherichia coli B088]
 gi|300817723|ref|ZP_07097938.1| GMP synthase protein [Escherichia coli MS 107-1]
 gi|300820823|ref|ZP_07100973.1| GMP synthase protein [Escherichia coli MS 119-7]
 gi|300903522|ref|ZP_07121446.1| GMP synthase protein [Escherichia coli MS 84-1]
 gi|300920661|ref|ZP_07137073.1| GMP synthase protein [Escherichia coli MS 115-1]
 gi|300981944|ref|ZP_07175812.1| GMP synthase protein [Escherichia coli MS 45-1]
 gi|300998017|ref|ZP_07181920.1| GMP synthase protein [Escherichia coli MS 200-1]
 gi|301047135|ref|ZP_07194232.1| GMP synthase protein [Escherichia coli MS 185-1]
 gi|301302864|ref|ZP_07208992.1| GMP synthase protein [Escherichia coli MS 124-1]
 gi|306814426|ref|ZP_07448588.1| GMP synthase [Escherichia coli NC101]
 gi|307312498|ref|ZP_07592131.1| GMP synthase, large subunit [Escherichia coli W]
 gi|309794446|ref|ZP_07688869.1| GMP synthase protein [Escherichia coli MS 145-7]
 gi|312973252|ref|ZP_07787424.1| GMP synthase [Escherichia coli 1827-70]
 gi|331658647|ref|ZP_08359591.1| GMP synthase (glutamine-hydrolyzing) [Escherichia coli TA206]
 gi|331664067|ref|ZP_08364977.1| GMP synthase (glutamine-hydrolyzing) [Escherichia coli TA143]
 gi|331669253|ref|ZP_08370101.1| GMP synthase (glutamine-hydrolyzing) [Escherichia coli TA271]
 gi|331678497|ref|ZP_08379172.1| GMP synthase (glutamine-hydrolyzing) [Escherichia coli H591]
 gi|331684152|ref|ZP_08384748.1| GMP synthase (glutamine-hydrolyzing) [Escherichia coli H299]
 gi|332278340|ref|ZP_08390753.1| glutamine-hydrolyzing amonia dependent GMP synthetase [Shigella sp.
           D9]
 gi|54037231|sp|P64295|GUAA_ECO57 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|54041332|sp|P64294|GUAA_ECOL6 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|122422916|sp|Q1R8M9|GUAA_ECOUT RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|122958139|sp|Q0TEY1|GUAA_ECOL5 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226738441|sp|B7MHY8|GUAA_ECO45 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226738442|sp|B5Z0X6|GUAA_ECO5E RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226738443|sp|B7NQV3|GUAA_ECO7I RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226738444|sp|B7M7L1|GUAA_ECO8A RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226738446|sp|A8A313|GUAA_ECOHS RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226738447|sp|A1AE43|GUAA_ECOK1 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226738448|sp|B1IWF4|GUAA_ECOLC RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226738450|sp|B6I579|GUAA_ECOSE RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226738451|sp|B1LNF9|GUAA_ECOSM RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|254800096|sp|B7LCP7|GUAA_ECO55 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|254800097|sp|B7MYD5|GUAA_ECO81 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|26109274|gb|AAN81476.1|AE016764_158 GMP synthase (glutamine-hydrolyzing) [Escherichia coli CFT073]
 gi|13362839|dbj|BAB36792.1| GMP synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|91073404|gb|ABE08285.1| glutamine-hydrolyzing amonia dependent GMP synthetase [Escherichia
           coli UTI89]
 gi|110344261|gb|ABG70498.1| GMP synthase [Escherichia coli 536]
 gi|115513858|gb|ABJ01933.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Escherichia coli APEC O1]
 gi|157067662|gb|ABV06917.1| GMP synthase (glutamine-hydrolyzing) [Escherichia coli HS]
 gi|169754138|gb|ACA76837.1| GMP synthase, large subunit [Escherichia coli ATCC 8739]
 gi|170521199|gb|ACB19377.1| GMP synthase (glutamine-hydrolyzing) [Escherichia coli SMS-3-5]
 gi|187770635|gb|EDU34479.1| GMP synthase (glutamine-hydrolyzing) [Escherichia coli O157:H7 str.
           EC4196]
 gi|188017013|gb|EDU55135.1| GMP synthase [Escherichia coli O157:H7 str. EC4113]
 gi|188491634|gb|EDU66737.1| GMP synthetase [Escherichia coli 53638]
 gi|189003283|gb|EDU72269.1| GMP synthase [Escherichia coli O157:H7 str. EC4076]
 gi|189356551|gb|EDU74970.1| GMP synthase [Escherichia coli O157:H7 str. EC4401]
 gi|189362273|gb|EDU80692.1| GMP synthase [Escherichia coli O157:H7 str. EC4486]
 gi|189368390|gb|EDU86806.1| GMP synthase [Escherichia coli O157:H7 str. EC4501]
 gi|189372276|gb|EDU90692.1| GMP synthase [Escherichia coli O157:H7 str. EC869]
 gi|189378613|gb|EDU97029.1| GMP synthase [Escherichia coli O157:H7 str. EC508]
 gi|190902261|gb|EDV62001.1| GMP synthase [Escherichia coli B7A]
 gi|190906762|gb|EDV66366.1| GMP synthase [Escherichia coli F11]
 gi|192927624|gb|EDV82240.1| GMP synthase [Escherichia coli E22]
 gi|192958271|gb|EDV88711.1| GMP synthase [Escherichia coli E110019]
 gi|194414657|gb|EDX30929.1| GMP synthase [Escherichia coli B171]
 gi|194419603|gb|EDX35683.1| GMP synthase [Shigella dysenteriae 1012]
 gi|208728135|gb|EDZ77736.1| GMP synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208733715|gb|EDZ82402.1| GMP synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208739960|gb|EDZ87642.1| GMP synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209159016|gb|ACI36449.1| GMP synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209763448|gb|ACI80036.1| GMP synthetase [Escherichia coli]
 gi|209763450|gb|ACI80037.1| GMP synthetase [Escherichia coli]
 gi|209763452|gb|ACI80038.1| GMP synthetase [Escherichia coli]
 gi|209763454|gb|ACI80039.1| GMP synthetase [Escherichia coli]
 gi|209763456|gb|ACI80040.1| GMP synthetase [Escherichia coli]
 gi|209913243|dbj|BAG78317.1| GMP synthase [Escherichia coli SE11]
 gi|217320065|gb|EEC28490.1| GMP synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|218352866|emb|CAU98665.1| GMP synthetase (glutamine aminotransferase) [Escherichia coli
           55989]
 gi|218361800|emb|CAQ99399.1| GMP synthetase (glutamine aminotransferase) [Escherichia coli IAI1]
 gi|218366200|emb|CAR03946.1| GMP synthetase (glutamine aminotransferase) [Escherichia coli S88]
 gi|218371000|emb|CAR18828.1| GMP synthetase (glutamine aminotransferase) [Escherichia coli
           IAI39]
 gi|218428186|emb|CAR09101.2| GMP synthetase (glutamine aminotransferase) [Escherichia coli ED1a]
 gi|222034215|emb|CAP76956.1| GMP synthase [glutamine-hydrolyzing] [Escherichia coli LF82]
 gi|226901380|gb|EEH87639.1| bifunctional GMP synthase/glutamine amidotransferase [Escherichia
           sp. 3_2_53FAA]
 gi|227835889|gb|EEJ46355.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Escherichia coli 83972]
 gi|254593853|gb|ACT73214.1| GMP synthetase (glutamine aminotransferase) [Escherichia coli
           O157:H7 str. TW14359]
 gi|257755250|dbj|BAI26752.1| GMP synthetase [Escherichia coli O26:H11 str. 11368]
 gi|257760284|dbj|BAI31781.1| GMP synthetase [Escherichia coli O103:H2 str. 12009]
 gi|257765552|dbj|BAI37047.1| GMP synthetase [Escherichia coli O111:H- str. 11128]
 gi|281179558|dbj|BAI55888.1| GMP synthase [Escherichia coli SE15]
 gi|284922454|emb|CBG35541.1| GMP synthase [glutamine-hydrolyzing] [Escherichia coli 042]
 gi|290763601|gb|ADD57562.1| GMP synthase (glutamine-hydrolyzing) [Escherichia coli O55:H7 str.
           CB9615]
 gi|291323690|gb|EFE63118.1| GMP synthase [Escherichia coli B088]
 gi|291471386|gb|EFF13870.1| conserved hypothetical protein [Escherichia coli B354]
 gi|294493180|gb|ADE91936.1| GMP synthase (glutamine-hydrolyzing) [Escherichia coli IHE3034]
 gi|300300957|gb|EFJ57342.1| GMP synthase protein [Escherichia coli MS 185-1]
 gi|300304067|gb|EFJ58587.1| GMP synthase protein [Escherichia coli MS 200-1]
 gi|300404474|gb|EFJ88012.1| GMP synthase protein [Escherichia coli MS 84-1]
 gi|300408890|gb|EFJ92428.1| GMP synthase protein [Escherichia coli MS 45-1]
 gi|300412356|gb|EFJ95666.1| GMP synthase protein [Escherichia coli MS 115-1]
 gi|300526576|gb|EFK47645.1| GMP synthase protein [Escherichia coli MS 119-7]
 gi|300529711|gb|EFK50773.1| GMP synthase protein [Escherichia coli MS 107-1]
 gi|300841799|gb|EFK69559.1| GMP synthase protein [Escherichia coli MS 124-1]
 gi|305851820|gb|EFM52272.1| GMP synthase [Escherichia coli NC101]
 gi|306907421|gb|EFN37925.1| GMP synthase, large subunit [Escherichia coli W]
 gi|307554527|gb|ADN47302.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Escherichia coli ABU 83972]
 gi|307625940|gb|ADN70244.1| GMP synthase [Escherichia coli UM146]
 gi|308121902|gb|EFO59164.1| GMP synthase protein [Escherichia coli MS 145-7]
 gi|310331847|gb|EFP99082.1| GMP synthase [Escherichia coli 1827-70]
 gi|312947081|gb|ADR27908.1| GMP synthase [Escherichia coli O83:H1 str. NRG 857C]
 gi|315061826|gb|ADT76153.1| GMP synthetase (glutamine aminotransferase) [Escherichia coli W]
 gi|315256527|gb|EFU36495.1| GMP synthase protein [Escherichia coli MS 85-1]
 gi|315288084|gb|EFU47484.1| GMP synthase protein [Escherichia coli MS 110-3]
 gi|315292429|gb|EFU51781.1| GMP synthase protein [Escherichia coli MS 153-1]
 gi|315300464|gb|EFU59694.1| GMP synthase protein [Escherichia coli MS 16-3]
 gi|320180497|gb|EFW55428.1| GMP synthase [Shigella boydii ATCC 9905]
 gi|320188840|gb|EFW63499.1| GMP synthase [Escherichia coli O157:H7 str. EC1212]
 gi|320196341|gb|EFW70965.1| GMP synthase [Escherichia coli WV_060327]
 gi|320640851|gb|EFX10339.1| GMP synthase [Escherichia coli O157:H7 str. G5101]
 gi|320646294|gb|EFX15221.1| GMP synthase [Escherichia coli O157:H- str. 493-89]
 gi|320651799|gb|EFX20179.1| GMP synthase [Escherichia coli O157:H- str. H 2687]
 gi|320657185|gb|EFX24994.1| GMP synthase [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320662791|gb|EFX30123.1| GMP synthase [Escherichia coli O55:H7 str. USDA 5905]
 gi|323156160|gb|EFZ42319.1| GMP synthase [Escherichia coli EPECa14]
 gi|323170222|gb|EFZ55875.1| GMP synthase [Escherichia coli LT-68]
 gi|323177370|gb|EFZ62958.1| GMP synthase [Escherichia coli 1180]
 gi|323184432|gb|EFZ69807.1| GMP synthase [Escherichia coli 1357]
 gi|323188153|gb|EFZ73446.1| GMP synthase [Escherichia coli RN587/1]
 gi|323377593|gb|ADX49861.1| GMP synthase, large subunit [Escherichia coli KO11]
 gi|323941231|gb|EGB37416.1| GMP synthase domain-containing protein [Escherichia coli E482]
 gi|323944729|gb|EGB40796.1| GMP synthase domain-containing protein [Escherichia coli H120]
 gi|323949164|gb|EGB45055.1| GMP synthase domain-containing protein [Escherichia coli H252]
 gi|323955745|gb|EGB51503.1| GMP synthase domain-containing protein [Escherichia coli H263]
 gi|324008512|gb|EGB77731.1| GMP synthase protein [Escherichia coli MS 57-2]
 gi|324020067|gb|EGB89286.1| GMP synthase protein [Escherichia coli MS 117-3]
 gi|324118149|gb|EGC12046.1| GMP synthase domain-containing protein [Escherichia coli E1167]
 gi|326340305|gb|EGD64109.1| GMP synthase [Escherichia coli O157:H7 str. 1125]
 gi|326344989|gb|EGD68733.1| GMP synthase [Escherichia coli O157:H7 str. 1044]
 gi|331054312|gb|EGI26339.1| GMP synthase (glutamine-hydrolyzing) [Escherichia coli TA206]
 gi|331059866|gb|EGI31843.1| GMP synthase (glutamine-hydrolyzing) [Escherichia coli TA143]
 gi|331064447|gb|EGI36358.1| GMP synthase (glutamine-hydrolyzing) [Escherichia coli TA271]
 gi|331074957|gb|EGI46277.1| GMP synthase (glutamine-hydrolyzing) [Escherichia coli H591]
 gi|331079104|gb|EGI50306.1| GMP synthase (glutamine-hydrolyzing) [Escherichia coli H299]
 gi|332089774|gb|EGI94875.1| GMP synthase [Shigella dysenteriae 155-74]
 gi|332100692|gb|EGJ04038.1| glutamine-hydrolyzing amonia dependent GMP synthetase [Shigella sp.
           D9]
          Length = 525

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVLDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|16130432|ref|NP_417002.1| GMP synthetase (glutamine aminotransferase) [Escherichia coli str.
           K-12 substr. MG1655]
 gi|89109313|ref|AP_003093.1| GMP synthetase [Escherichia coli str. K-12 substr. W3110]
 gi|170082117|ref|YP_001731437.1| GMP synthetase (glutamine aminotransferase) [Escherichia coli str.
           K-12 substr. DH10B]
 gi|194437686|ref|ZP_03069782.1| GMP synthase [Escherichia coli 101-1]
 gi|238901672|ref|YP_002927468.1| GMP synthetase (glutamine aminotransferase) [Escherichia coli
           BW2952]
 gi|253772599|ref|YP_003035430.1| GMP synthase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254162481|ref|YP_003045589.1| GMP synthase [Escherichia coli B str. REL606]
 gi|256021807|ref|ZP_05435672.1| GMP synthase [Escherichia sp. 4_1_40B]
 gi|293415772|ref|ZP_06658415.1| GMP synthase [Escherichia coli B185]
 gi|300930147|ref|ZP_07145568.1| GMP synthase protein [Escherichia coli MS 187-1]
 gi|300940246|ref|ZP_07154844.1| GMP synthase protein [Escherichia coli MS 21-1]
 gi|300951788|ref|ZP_07165603.1| GMP synthase protein [Escherichia coli MS 116-1]
 gi|300958864|ref|ZP_07170971.1| GMP synthase protein [Escherichia coli MS 175-1]
 gi|301022357|ref|ZP_07186248.1| GMP synthase protein [Escherichia coli MS 196-1]
 gi|301648262|ref|ZP_07248005.1| GMP synthase protein [Escherichia coli MS 146-1]
 gi|307139142|ref|ZP_07498498.1| GMP synthase [Escherichia coli H736]
 gi|331643126|ref|ZP_08344261.1| GMP synthase [glutamine-hydrolyzing] (Glutamineamidotransferase)
           (GMP synthetase) (GMPS) [Escherichia coli H736]
 gi|331653935|ref|ZP_08354936.1| GMP synthase [glutamine-hydrolyzing] (Glutamineamidotransferase)
           (GMP synthetase) (GMPS) [Escherichia coli M718]
 gi|121769|sp|P04079|GUAA_ECOLI RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; Short=GMPS; AltName: Full=Glutamine
           amidotransferase
 gi|226738445|sp|B1XAY2|GUAA_ECODH RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|259647679|sp|C4ZX82|GUAA_ECOBW RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|1310841|pdb|1GPM|A Chain A, Escherichia Coli Gmp Synthetase Complexed With Amp And
           Pyrophosphate
 gi|1310842|pdb|1GPM|B Chain B, Escherichia Coli Gmp Synthetase Complexed With Amp And
           Pyrophosphate
 gi|1310843|pdb|1GPM|C Chain C, Escherichia Coli Gmp Synthetase Complexed With Amp And
           Pyrophosphate
 gi|1310844|pdb|1GPM|D Chain D, Escherichia Coli Gmp Synthetase Complexed With Amp And
           Pyrophosphate
 gi|146276|gb|AAB18619.1| GMP synthetase [Escherichia coli]
 gi|1788854|gb|AAC75560.1| GMP synthetase (glutamine aminotransferase) [Escherichia coli str.
           K-12 substr. MG1655]
 gi|1805567|dbj|BAA16394.1| GMP synthetase [Escherichia coli str. K12 substr. W3110]
 gi|169889952|gb|ACB03659.1| GMP synthetase (glutamine aminotransferase) [Escherichia coli str.
           K-12 substr. DH10B]
 gi|194423492|gb|EDX39483.1| GMP synthase [Escherichia coli 101-1]
 gi|238861384|gb|ACR63382.1| GMP synthetase (glutamine aminotransferase) [Escherichia coli
           BW2952]
 gi|242378105|emb|CAQ32878.1| GMP synthetase [Escherichia coli BL21(DE3)]
 gi|253323643|gb|ACT28245.1| GMP synthase, large subunit [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253974382|gb|ACT40053.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Escherichia coli B str. REL606]
 gi|253978549|gb|ACT44219.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Escherichia coli BL21(DE3)]
 gi|260448413|gb|ACX38835.1| GMP synthase, large subunit [Escherichia coli DH1]
 gi|291433420|gb|EFF06399.1| GMP synthase [Escherichia coli B185]
 gi|299881294|gb|EFI89505.1| GMP synthase protein [Escherichia coli MS 196-1]
 gi|300314492|gb|EFJ64276.1| GMP synthase protein [Escherichia coli MS 175-1]
 gi|300448985|gb|EFK12605.1| GMP synthase protein [Escherichia coli MS 116-1]
 gi|300454942|gb|EFK18435.1| GMP synthase protein [Escherichia coli MS 21-1]
 gi|300461953|gb|EFK25446.1| GMP synthase protein [Escherichia coli MS 187-1]
 gi|301073649|gb|EFK88455.1| GMP synthase protein [Escherichia coli MS 146-1]
 gi|309702839|emb|CBJ02170.1| GMP synthase [glutamine-hydrolyzing] [Escherichia coli ETEC H10407]
 gi|315137131|dbj|BAJ44290.1| GMP synthase [Escherichia coli DH1]
 gi|315615766|gb|EFU96398.1| GMP synthase [glutamine-hydrolyzing] [Escherichia coli 3431]
 gi|323936400|gb|EGB32690.1| GMP synthase domain-containing protein [Escherichia coli E1520]
 gi|323961317|gb|EGB56929.1| GMP synthase domain-containing protein [Escherichia coli H489]
 gi|323967952|gb|EGB63364.1| GMP synthase domain-containing protein [Escherichia coli M863]
 gi|323971080|gb|EGB66328.1| GMP synthase domain-containing protein [Escherichia coli TA007]
 gi|323977314|gb|EGB72400.1| GMP synthase domain-containing protein [Escherichia coli TW10509]
 gi|327252210|gb|EGE63882.1| GMP synthase [Escherichia coli STEC_7v]
 gi|331039924|gb|EGI12144.1| GMP synthase [glutamine-hydrolyzing] (Glutamineamidotransferase)
           (GMP synthetase) (GMPS) [Escherichia coli H736]
 gi|331048784|gb|EGI20860.1| GMP synthase [glutamine-hydrolyzing] (Glutamineamidotransferase)
           (GMP synthetase) (GMPS) [Escherichia coli M718]
 gi|332344378|gb|AEE57712.1| GMP synthase GuaA [Escherichia coli UMNK88]
          Length = 525

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVLDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|327314588|ref|YP_004330025.1| tRNA(Ile)-lysidine synthetase [Prevotella denticola F0289]
 gi|326945281|gb|AEA21166.1| tRNA(Ile)-lysidine synthetase [Prevotella denticola F0289]
          Length = 456

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 1/50 (2%)

Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
          L+  SGG DS   L    +   R+E +  ++  R + E +      +++ 
Sbjct: 22 LVALSGGADSVCLLLCLKELGYRIEAVHCNFHLRGE-ESQRDEQYCQELC 70


>gi|325856881|ref|ZP_08172379.1| tRNA(Ile)-lysidine synthetase [Prevotella denticola CRIS 18C-A]
 gi|325483254|gb|EGC86231.1| tRNA(Ile)-lysidine synthetase [Prevotella denticola CRIS 18C-A]
          Length = 456

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 1/50 (2%)

Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
          L+  SGG DS   L    +   R+E +  ++  R + E +      +++ 
Sbjct: 22 LVALSGGADSVCLLLCLKELGYRIEAVHCNFHLRGE-ESQRDEQYCQELC 70


>gi|229067828|ref|ZP_04201146.1| tRNA(Ile)-lysidine synthase [Bacillus cereus F65185]
 gi|229176664|ref|ZP_04304069.1| tRNA(Ile)-lysidine synthase [Bacillus cereus 172560W]
 gi|229188349|ref|ZP_04315398.1| tRNA(Ile)-lysidine synthase [Bacillus cereus ATCC 10876]
 gi|228595148|gb|EEK52918.1| tRNA(Ile)-lysidine synthase [Bacillus cereus ATCC 10876]
 gi|228606831|gb|EEK64247.1| tRNA(Ile)-lysidine synthase [Bacillus cereus 172560W]
 gi|228715312|gb|EEL67170.1| tRNA(Ile)-lysidine synthase [Bacillus cereus F65185]
          Length = 480

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 22/197 (11%), Positives = 52/197 (26%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D++K   + ++  SGG DS   L + L++                          + +V 
Sbjct: 21  DVLKNDSTIVVGVSGGPDSLALLYYLLEK--------------------RAEKQLEIVVA 60

Query: 63  LMPKW--KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +      D   ED      +  ++     T  + +                     F  
Sbjct: 61  HVDHMFRGDESHEDLRFVQGLCEELGIICETIRINVSQYQQQYGMNAQVAARECRYAFLE 120

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKK 177
            +  +     + +G    D       R       +    + ++       +  PL+ + K
Sbjct: 121 RIMKKYDARYVALGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGYLIRPLLGVTK 180

Query: 178 YETWKLAQDIGGQDLVN 194
            E       +     ++
Sbjct: 181 EEIVDYCNKLNLMPRID 197


>gi|269126391|ref|YP_003299761.1| argininosuccinate synthase [Thermomonospora curvata DSM 43183]
 gi|268311349|gb|ACY97723.1| argininosuccinate synthase [Thermomonospora curvata DSM 43183]
          Length = 400

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 19/51 (37%), Gaps = 1/51 (1%)

Query: 7  KAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCV 56
               +L +SGG D+S  +   A      V  ++ D GQ  +     R   
Sbjct: 1  MTERVVLAYSGGLDTSVAIPYLAEQTGGEVIAVAVDVGQGGEDLEVIRKRA 51


>gi|221124512|ref|XP_002166691.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
 gi|260221446|emb|CBA30017.1| GMP synthase [glutamine-hydrolyzing] [Curvibacter putative symbiont
           of Hydra magnipapillata]
          Length = 548

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 57/185 (30%), Gaps = 19/185 (10%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D+G               ++ E       
Sbjct: 229 VILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHG-------------LLRLNEGDMVMDM 275

Query: 70  SLGEDH-ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +G+ H  +      D     L+     + +   +   FV           A    + G 
Sbjct: 276 FVGKLHAKVIRVDASDQFLGHLSGVSDPEAKRKIIGREFVEVFKAEAARLTAAGESKNGA 335

Query: 129 TNIVI---GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
             +          +  G    +  TI++      L  +  + +  PL  L K E  +L  
Sbjct: 336 KWLAQGTIYPDVIESGGAKSKKAVTIKSHHNVGGLPEQLGLKLLEPLRELFKDEVRELGV 395

Query: 186 DIGGQ 190
            +G  
Sbjct: 396 ALGLP 400


>gi|187932723|ref|YP_001887300.1| argininosuccinate synthase [Clostridium botulinum B str. Eklund
           17B]
 gi|229889870|sp|B2TQ23|ASSY_CLOBB RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|187720876|gb|ACD22097.1| argininosuccinate synthase [Clostridium botulinum B str. Eklund
           17B]
          Length = 407

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 60/217 (27%), Gaps = 26/217 (11%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + K    +L +SGG D+S  + W  + +   V  +  + GQ+++++      ++    +L
Sbjct: 1   MNKLNKVILAYSGGLDTSIIIPWLKENYNCEVIAVCGNVGQKDELDGLEEKAIKTGASKL 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     ED+I P    G I            +   +     +  R +         
Sbjct: 61  YIEDLTKEFVEDYIFPTIQAGAIYEG-------KYLLGTSFARPLIGKRLVEIAKAEGAD 113

Query: 123 AYRLGITNI----------VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
           A   G T            V           P    D     +        +        
Sbjct: 114 AICHGCTGKGNDQVRFELAVKAFDPDMKIIAPWRIWDIKSREDEIAYAEARNVPIKINHE 173

Query: 173 MWLKKYETWKLAQDIG-------GQDLVNLILEESHT 202
               K +        G        +   + ILE S++
Sbjct: 174 TNYSKDKNIWHLSHEGLDLEDPKNEPKYDEILELSNS 210


>gi|148359261|ref|YP_001250468.1| GMP synthetase [Legionella pneumophila str. Corby]
 gi|296107308|ref|YP_003619008.1| GMP synthase (glutamine-hydrolysing) [Legionella pneumophila
           2300/99 Alcoy]
 gi|226739638|sp|A5ICM2|GUAA_LEGPC RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|148281034|gb|ABQ55122.1| GMP synthetase [Legionella pneumophila str. Corby]
 gi|295649209|gb|ADG25056.1| GMP synthase (glutamine-hydrolysing) [Legionella pneumophila
           2300/99 Alcoy]
          Length = 525

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 48/185 (25%), Gaps = 16/185 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS   +       +++  +  D G    + L     V       M  
Sbjct: 226 TEKVLLGLSGGVDSSVVAALLHRAIGEQLVCVFVDTG---LLRLNEAEQVLSMFGRHMGI 282

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              ++  +     A+ G        K +     +                          
Sbjct: 283 RIIAVNAEDKFLTALKGVTCPEEKRKIIGRTFIEVFDEEAQKLTDIKWL----------- 331

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                +        +   +     I++      L    ++ +  P+  L K E  ++  +
Sbjct: 332 -AQGTIYPDVIESAATSTNDAAVVIKSHHNVGGLPDTLNLKLLEPIRELFKDEVRQVGLE 390

Query: 187 IGGQD 191
           +G   
Sbjct: 391 LGLPH 395


>gi|120602947|ref|YP_967347.1| thiamine biosynthesis protein [Desulfovibrio vulgaris DP4]
 gi|120563176|gb|ABM28920.1| thiamine biosynthesis protein [Desulfovibrio vulgaris DP4]
          Length = 368

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
          A+ L SGG DS   +    ++  RV+ L F
Sbjct: 8  AVALLSGGLDSILAVKLVEEQGLRVKCLHF 37


>gi|46579504|ref|YP_010312.1| hypothetical protein DVU1091 [Desulfovibrio vulgaris str.
          Hildenborough]
 gi|46448918|gb|AAS95571.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
          Hildenborough]
 gi|311233318|gb|ADP86172.1| Thiamine biosynthesis protein-like protein [Desulfovibrio
          vulgaris RCH1]
          Length = 368

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 11 ALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
          A+ L SGG DS   +    ++  RV+ L F
Sbjct: 8  AVALLSGGLDSILAVKLVEEQGLRVKCLHF 37


>gi|54294610|ref|YP_127025.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Legionella pneumophila str. Lens]
 gi|81368495|sp|Q5WVX4|GUAA_LEGPL RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|53754442|emb|CAH15926.1| hypothetical protein lpl1686 [Legionella pneumophila str. Lens]
          Length = 525

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 48/185 (25%), Gaps = 16/185 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS   +       +++  +  D G    + L     V       M  
Sbjct: 226 TEKVLLGLSGGVDSSVVAALLHRAIGEQLVCVFVDTG---LLRLNEAEQVLSMFGRHMGI 282

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              ++  +     A+ G        K +     +                          
Sbjct: 283 RIIAVNAEDKFLTALKGVTCPEEKRKIIGRTFIEVFDEEAQKLTDIKWL----------- 331

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                +        +   +     I++      L    ++ +  P+  L K E  ++  +
Sbjct: 332 -AQGTIYPDVIESAATSTNDAAVVIKSHHNVGGLPDTLNLKLLEPIRELFKDEVRQVGLE 390

Query: 187 IGGQD 191
           +G   
Sbjct: 391 LGLPH 395


>gi|182415751|ref|YP_001820817.1| sulfate adenylyltransferase subunit 2 [Opitutus terrae PB90-1]
 gi|177842965|gb|ACB77217.1| sulfate adenylyltransferase, small subunit [Opitutus terrae PB90-1]
          Length = 301

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 43/181 (23%), Gaps = 13/181 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVET----LSFDYGQRNKVELECRLCVRKKIVELMP 65
           SA +LFSGG+DS    + A   F         L  D G  +               E   
Sbjct: 29  SAAVLFSGGKDSLVLAALARKAFAPARPPFPLLHIDTG--HNFPETLAFR-----DEFAR 81

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                L    +      G ++  +        +Q   L +     +    L        +
Sbjct: 82  TCGYQLIVRRVQDTIDAGRVTEETGPNASRNVLQTVTLLDAIAELKLDAALGGGRRDEEK 141

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                        D  G  D R+                      PL    + + W   +
Sbjct: 142 --ARAKERVFSHRDEFGQWDPRNQRPELWNLYNGRKRAGEHFRVFPLSNWTELDVWAYIR 199

Query: 186 D 186
            
Sbjct: 200 R 200


>gi|168205553|ref|ZP_02631558.1| thiamin biosynthesis protein ThiI [Clostridium perfringens E str.
           JGS1987]
 gi|170662909|gb|EDT15592.1| thiamin biosynthesis protein ThiI [Clostridium perfringens E str.
           JGS1987]
          Length = 326

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 15/135 (11%), Positives = 31/135 (22%), Gaps = 13/135 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL + SGG DS        D+   V  + F          E    + K+I   +     
Sbjct: 3   RALAMVSGGLDSILAAKLIKDQGIEVIGICFK---SYFFNEENAKRMCKQIDMPLE---- 55

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 ++  +                 +      +  +   +   L          G  
Sbjct: 56  ------VVDFSEEHFEMVKDPKHGRGKNMNPCIDCHAMMMRYSGELLKKFDADFIITGEV 109

Query: 130 NIVIGVCETDYSGYP 144
                + +   +   
Sbjct: 110 LNQRPMSQNRQALNT 124


>gi|150010344|ref|YP_001305087.1| tRNA-specific 2-thiouridylase MnmA [Parabacteroides distasonis ATCC
           8503]
 gi|205816895|sp|A6LIF1|MNMA_PARD8 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|149938768|gb|ABR45465.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Parabacteroides distasonis ATCC 8503]
          Length = 358

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 50/187 (26%), Gaps = 8/187 (4%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
            L SGG DSS  +    +            G   + +     C  ++ +E+        G
Sbjct: 5   ALVSGGVDSSVVVHQLKEAGYDPTIFYIRIGM--EDKDGYIDCPAEEDIEITSYIARKYG 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
               + +++  +     ++  +    +        +  + I F  F              
Sbjct: 63  CRFEI-VSLHDEYWDRVVSYTIESVKRGLTPNPDMMCNKYIKFGCFEEKWGKDFDKIATG 121

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM---WLKKYET--WKLAQDI 187
                T+  G            +    LG  + + +   +     L K E      AQ +
Sbjct: 122 HYATTTEIDGKTWLSTAKDPVKDQTDFLGQITRLQIQKLMFPIGHLMKSEVRAIAEAQKL 181

Query: 188 GGQDLVN 194
                 +
Sbjct: 182 PSAKRKD 188


>gi|170739288|ref|YP_001767943.1| GMP synthase [Methylobacterium sp. 4-46]
 gi|168193562|gb|ACA15509.1| GMP synthase, large subunit [Methylobacterium sp. 4-46]
          Length = 518

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 55/184 (29%), Gaps = 17/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DS+       +   +++  +  D+G     E        +++V L    
Sbjct: 221 EKVLCGLSGGVDSAVAAVLIHEAIGEQLTCVFVDHGLLRLGE-------AEEVVRLFRDH 273

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +            LG ++  +  +     I    +       R      F A       
Sbjct: 274 YNIPLVHVQAQDLFLGALAGVTDPEVKRKTIGRLFIDVFEAEARKSGGAAFLA------- 326

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                +     +   +      TI++      L    ++ +  PL  L K E   L +++
Sbjct: 327 --QGTLYPDVIESVSFTGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRVLGREL 384

Query: 188 GGQD 191
           G  D
Sbjct: 385 GLPD 388


>gi|94266357|ref|ZP_01290057.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [delta
           proteobacterium MLMS-1]
 gi|93453040|gb|EAT03525.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [delta
           proteobacterium MLMS-1]
          Length = 389

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 51/179 (28%), Gaps = 12/179 (6%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +  SGG DSS   +        V  +     Q    E+E        + + +        
Sbjct: 26  VAMSGGVDSSVTAALLQQAGAEVRGVFMRLAQ---PEVEAHRQRAAAVADFL------GI 76

Query: 73  EDHILPLA-ILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           E  +L LA        +   +     +  N         +  + L         L  T  
Sbjct: 77  ELTVLDLAQPFRQQVLNPFVEAYLAGLTPNPCVFCNRLIKFGLLLETLLAQGVELLATGH 136

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
            + +      G   CR       ++     L  E    +  PL    K E ++LA  +G
Sbjct: 137 YVRLLPAATGGRRLCRGLDPGKDQSYFLCRLAAEKLPRLLFPLGDKHKSEVYQLAARLG 195


>gi|78224058|ref|YP_385805.1| NAD synthetase [Geobacter metallireducens GS-15]
 gi|78195313|gb|ABB33080.1| NH(3)-dependent NAD(+) synthetase [Geobacter metallireducens
          GS-15]
          Length = 271

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 17/61 (27%), Gaps = 2/61 (3%)

Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           A+L  SGG DS+     A +    + +      Y   N           + +       
Sbjct: 28 KAVLGLSGGIDSALVAYLAAEALGPENIHACIMPYRTSNPESEAHARLAAEHLGIHYQVI 87

Query: 68 K 68
           
Sbjct: 88 D 88


>gi|328949749|ref|YP_004367084.1| NH(3)-dependent NAD(+) synthetase [Marinithermus hydrothermalis
          DSM 14884]
 gi|328450073|gb|AEB10974.1| NH(3)-dependent NAD(+) synthetase [Marinithermus hydrothermalis
          DSM 14884]
          Length = 282

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           A++  SGG DS+T L+ A+     + V  L+  +       LE    V +     +   
Sbjct: 39 KAVVAVSGGVDSATTLALAVRALGPENVHALALPHRDSRPESLEHARLVAQTFGVALEVV 98

Query: 68 K 68
           
Sbjct: 99 D 99


>gi|328544366|ref|YP_004304475.1| NAD synthase family [polymorphum gilvum SL003B-26A1]
 gi|326414108|gb|ADZ71171.1| NAD synthase family [Polymorphum gilvum SL003B-26A1]
          Length = 562

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 3/53 (5%)

Query: 12  LLL-FSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIV 61
           ++L  SGG DS+ C + A+D    +RV  +   Y   ++  +       +K+ 
Sbjct: 297 VILGLSGGIDSAVCAAMAVDALGPERVHGVMMPYRYTSRASIVDAEACARKLA 349


>gi|315222833|ref|ZP_07864718.1| tRNA(Ile)-lysidine synthetase [Streptococcus anginosus F0211]
 gi|315188069|gb|EFU21799.1| tRNA(Ile)-lysidine synthetase [Streptococcus anginosus F0211]
          Length = 425

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 23/177 (12%), Positives = 45/177 (25%), Gaps = 11/177 (6%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRL--CVRKKIV 61
               LL  SGG DS T L W     +     +     ++G R + + E      + KK+ 
Sbjct: 19  HRKVLLAISGGLDSMTLLDWLYKYREKLEIEIFLAHINHGVRKESDFEEEELKKIAKKLG 78

Query: 62  E--LMPKWKDSLGEDHILPLAIL---GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
                  +     E              +   + T  V     D+     F+       L
Sbjct: 79  VSIFTSSFSGPFSEQKARDFRYAFFKKIMLEENCTALVTAHHADDQAETIFMRILRGSRL 138

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
              + +  +    N  +      +                  N  + + +      +
Sbjct: 139 FHISGMKEKQKFANGELIRPLLSFQKSNFPPIFHFEDWTNQENHYLRNRIRNEYFPL 195


>gi|294010559|ref|YP_003544019.1| GMP synthase (glutamine-hydrolyzing) [Sphingobium japonicum UT26S]
 gi|292673889|dbj|BAI95407.1| GMP synthase (glutamine-hydrolyzing) [Sphingobium japonicum UT26S]
          Length = 519

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 57/184 (30%), Gaps = 17/184 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+       +   D++  +  D+G     E        +++V L  +  
Sbjct: 223 RVICGLSGGVDSAVAAVLIHEAIGDQLTCVFVDHGLMRLGE-------AEQVVSLFREHY 275

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                        LG +   +   +   K +        V       +  A  LA     
Sbjct: 276 GIKLVHVNAEERFLGGL---AGLTDPEKKRKFIGGEFIAVFEEEAKKIGGADFLAQGT-- 330

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
               +     +   +      TI++      L    ++ +  PL  L K E   L +++G
Sbjct: 331 ----LYPDVIESVSFTGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRVLGRELG 386

Query: 189 GQDL 192
             ++
Sbjct: 387 LPEI 390


>gi|227502055|ref|ZP_03932104.1| tRNA(Ile)-lysidine synthetase [Corynebacterium accolens ATCC
          49725]
 gi|227077210|gb|EEI15173.1| tRNA(Ile)-lysidine synthetase [Corynebacterium accolens ATCC
          49725]
          Length = 297

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 21/62 (33%), Gaps = 2/62 (3%)

Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYG--QRNKVELECRLCVRKKIVELMPKWKDSLG 72
           SGG DS    +  +     V  L  D+G    ++ + E      + +          + 
Sbjct: 9  LSGGADSLALCAAMIAEGHDVIALCVDHGLQDGSREQAEKAAWQAESLGARARVLVVRVP 68

Query: 73 ED 74
          E+
Sbjct: 69 EE 70


>gi|118445022|ref|YP_879024.1| hypothetical protein NT01CX_0558 [Clostridium novyi NT]
 gi|118135478|gb|ABK62522.1| conserved protein [Clostridium novyi NT]
          Length = 327

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 30/132 (22%), Gaps = 13/132 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL L SGG DS        D+   V  + F          E    + K+I         
Sbjct: 3   KALALISGGLDSILAAKLIKDQGIEVIGICFK---SYFFGPENAKRMTKQID-------- 51

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 ++  +        S        +      +  +       L          G  
Sbjct: 52  --IPLEVVDFSKEHFDMTKSPKHGHGKNMNPCIDCHAMMMRYAGELLEKFNADFIITGEV 109

Query: 130 NIVIGVCETDYS 141
                + +   S
Sbjct: 110 LNQRPMSQNKSS 121


>gi|114327814|ref|YP_744971.1| GMP synthase [Granulibacter bethesdensis CGDNIH1]
 gi|114315988|gb|ABI62048.1| GMP synthase (glutamine-hydrolyzing) [Granulibacter bethesdensis
           CGDNIH1]
          Length = 522

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 49/183 (26%), Gaps = 17/183 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+       +   D++  +  D+G   + E      V     +      
Sbjct: 226 RVICGLSGGVDSTVAAVLIHEAIGDQLTCIFVDHGLLRQSE---AEQVLAMFRDRFNI-- 280

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L      D+   +L      +++   +   F+                  G 
Sbjct: 281 -------KLVHRDASDLFLGALEGVSDPEVKRKTIGKLFIDVFEEEAAKIGGADFLAQGT 333

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                     +   +      TI++      L     + +  PL  L K E   L  ++G
Sbjct: 334 LY----PDVIESISFTGGPSVTIKSHHNVGGLPERMRMKLVEPLRELFKDEVRALGLELG 389

Query: 189 GQD 191
              
Sbjct: 390 LPK 392


>gi|57234409|ref|YP_181563.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Dehalococcoides ethenogenes 195]
 gi|91206804|sp|Q3Z886|GUAA_DEHE1 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|57224857|gb|AAW39914.1| GMP synthase [Dehalococcoides ethenogenes 195]
          Length = 533

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 57/185 (30%), Gaps = 17/185 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+   S       D++  +  + G   + E +  L V K  + +   + D
Sbjct: 238 VICALSGGVDSAVVASLIHKAIGDQLTCIYVNNGLLRREEADRTLHVFKNHMGMKIIYVD 297

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++       L  L  ++     + V          +       I FL             
Sbjct: 298 AVDRF----LDSLSGVTDPEQKRKVIGSEFIKVFEDEACKLGKIDFLAQGT--------- 344

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
              +     +           I++      L     + +  PL +L K E   L +++G 
Sbjct: 345 ---LYPDVIESVSSVSKASAKIKSHHNVGGLPAHMKLKLIEPLRYLFKDEVRLLGKELGL 401

Query: 190 QDLVN 194
            D + 
Sbjct: 402 PDEMI 406


>gi|260062415|ref|YP_003195495.1| GMP synthase [Robiginitalea biformata HTCC2501]
 gi|88783978|gb|EAR15149.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Robiginitalea biformata HTCC2501]
          Length = 509

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 49/181 (27%), Gaps = 18/181 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DS+             +  +  + G   K E E          E++ +
Sbjct: 212 TEKVILGLSGGVDSTVAAMLLHRAIGKHLHCIFVNNGLLRKNEFE----------EVLHQ 261

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +KD       +  +                  +        V              A  L
Sbjct: 262 YKDMGLNIKGVDASARFL-----DALEGESDPEKKRKIIGRVFIEVFDDEAHLVEDAKWL 316

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   I   V E+  +        TI++      L     + V  PL  L K E  ++   
Sbjct: 317 GQGTIYPDVIESVSATG--GPSATIKSHHNVGGLPDFMKLKVVEPLKMLFKDEVRRVGAS 374

Query: 187 I 187
           +
Sbjct: 375 L 375


>gi|145220392|ref|YP_001131101.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Prosthecochloris vibrioformis DSM 265]
 gi|226739666|sp|A4SGJ0|GUAA_PROVI RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|145206556|gb|ABP37599.1| GMP synthase (glutamine-hydrolyzing) [Chlorobium phaeovibrioides
           DSM 265]
          Length = 513

 Score = 43.0 bits (99), Expect = 0.032,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 55/185 (29%), Gaps = 22/185 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             + +   SGG DS+            ++  +  D G   K E E  +   K +      
Sbjct: 220 NNTVICGISGGVDSTVAAVLVSKAIGKQLHCVFVDNGLLRKNEAEKVMQFLKPLG----- 274

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            K +L +   L L  L  ++     + +  +                 F+       +  
Sbjct: 275 LKVTLADSRDLFLTRLKGVASPEKKRKIIGRT----------------FIRVFEEHIHEE 318

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                     +   S       +TI++      L     + +  PL  L K E   + ++
Sbjct: 319 KFLVQGTLYPDVIESVSVKGPSETIKSHHNVGGLPKRMKLKLIEPLRELFKDEVRAVGRE 378

Query: 187 IGGQD 191
           +G  +
Sbjct: 379 LGIAE 383


>gi|313679741|ref|YP_004057480.1| gmp synthase (glutamine-hydrolyzing) [Oceanithermus profundus DSM
           14977]
 gi|313152456|gb|ADR36307.1| GMP synthase (glutamine-hydrolyzing) [Oceanithermus profundus DSM
           14977]
          Length = 504

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 45/187 (24%), Gaps = 19/187 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              LL  SGG DSST              +  D+G     E E            +    
Sbjct: 211 ERVLLAVSGGVDSSTLALLLARAGVDHTAVFVDHGLLRLGEREEVERALASAGVNLVTVD 270

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E  +  L  +GD                        P R +        +    G 
Sbjct: 271 AR--ERFLAALEGVGDPEAKRKIIGREFVEVFKEQAARLGPFRFLAQGTLYPDVIESAG- 327

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                                 I++      L  E    +  P  +L K E  +L   +G
Sbjct: 328 ----------------GTGAANIKSHHNVGGLPAELGFELLEPFRYLFKDEVRELGLLLG 371

Query: 189 GQDLVNL 195
             D V L
Sbjct: 372 LPDTVRL 378


>gi|308048511|ref|YP_003912077.1| NAD+ synthetase [Ferrimonas balearica DSM 9799]
 gi|307630701|gb|ADN75003.1| NAD+ synthetase [Ferrimonas balearica DSM 9799]
          Length = 539

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 56/194 (28%), Gaps = 3/194 (1%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             A+L  SGG DS+  L+ A D    D+V+ +   +   + + +E      + +      
Sbjct: 280 KGAVLGLSGGIDSALTLAIAADALGADKVQAVMMPFKYTSSMSVEDARAQAEALGVTYDV 339

Query: 67  WKDSLGEDHIL-PLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  D  +  LA + + +    T+          L          I L         
Sbjct: 340 VSIEPMFDAFMGQLAPMFEGTQKDTTEENLQARARGVLLMALSNKSGKILLTTGNKSEMA 399

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G   +   +C          +    R       L       V T     +         
Sbjct: 400 VGYCTLYGDMCGGFAVIKDLPKLLVYRLSRYRNTLSEVIPERVITRPPSAELAPDQVDQD 459

Query: 186 DIGGQDLVNLILEE 199
            +   D+++ ILE 
Sbjct: 460 SLPPYDVLDDILER 473


>gi|269216612|ref|ZP_06160466.1| argininosuccinate synthase [Slackia exigua ATCC 700122]
 gi|269130141|gb|EEZ61223.1| argininosuccinate synthase [Slackia exigua ATCC 700122]
          Length = 410

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 21/54 (38%), Gaps = 1/54 (1%)

Query: 6  KKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRK 58
           +    +L +SGG D+S  L W   ++   V  +  + GQ  +     +     
Sbjct: 8  SEKQKVVLAYSGGLDTSVVLKWLQVEKGLDVIAICGNVGQDEEDLEYIKQKALD 61


>gi|242372682|ref|ZP_04818256.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Staphylococcus epidermidis M23864:W1]
 gi|242349599|gb|EES41200.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Staphylococcus epidermidis M23864:W1]
          Length = 513

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 56/185 (30%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS           D++  +  D+G   K E +    V ++  E      
Sbjct: 220 KVLCAMSGGVDSSVVAVLLHKAIGDQLTCIFVDHGLLRKGEGDM---VMEQFGEGF---- 272

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                        +  I  ++  + +      ++         N    VF    A    +
Sbjct: 273 ------------DMNIIRVNAQERFMDKLKGVSDPEQKRKIIGNEFVYVFDDEAAKLTDV 320

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G   TD          TI++      L  +    +  P+  L K E   L  ++G
Sbjct: 321 DFLAQGTLYTDVIESGTKTAQTIKSHHNVGGLPEDMEFELIEPINTLFKDEVRALGIELG 380

Query: 189 GQDLV 193
             + +
Sbjct: 381 IPEHL 385


>gi|229119726|ref|ZP_04248988.1| tRNA(Ile)-lysidine synthase [Bacillus cereus 95/8201]
 gi|228663751|gb|EEL19329.1| tRNA(Ile)-lysidine synthase [Bacillus cereus 95/8201]
          Length = 480

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 54/197 (27%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSW-----ALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           D++K+  + ++  SGG DS   L +     A  +F+ V     D    +    +      
Sbjct: 21  DVLKERSTIVVGVSGGPDSLALLYYLLEKRAAKQFEIVVA-HVD----HMFRGDESHEDL 75

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           + + +L            I           ++       +             R  + L 
Sbjct: 76  QFVQDLCKGLGVICETIRINVSQYQKQYGMNAQVAARECRYAFLERIMKKYDAR-YVALG 134

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                     +  +V G     Y+G    R                    +  PL+ +KK
Sbjct: 135 HHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNG--------------YLIRPLLGVKK 180

Query: 178 YETWKLAQDIGGQDLVN 194
            E      ++     ++
Sbjct: 181 EEIVNYCNELKIIPRID 197


>gi|168215839|ref|ZP_02641464.1| thiamin biosynthesis protein ThiI [Clostridium perfringens NCTC
           8239]
 gi|182381995|gb|EDT79474.1| thiamin biosynthesis protein ThiI [Clostridium perfringens NCTC
           8239]
          Length = 326

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 15/135 (11%), Positives = 31/135 (22%), Gaps = 13/135 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL + SGG DS        D+   V  + F          E    + K+I   +     
Sbjct: 3   RALAMVSGGLDSILAAKLIKDQGIEVIGICFK---SYFFNEENAKRMCKQIDMPLE---- 55

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 ++  +                 +      +  +   +   L          G  
Sbjct: 56  ------VVDFSEEHFEMVKDPKHGRGKNMNPCIDCHAMMMRYSGELLKKFDADFIITGEV 109

Query: 130 NIVIGVCETDYSGYP 144
                + +   +   
Sbjct: 110 LNQRPMSQNRQALNT 124


>gi|168210139|ref|ZP_02635764.1| thiamin biosynthesis protein ThiI [Clostridium perfringens B str.
           ATCC 3626]
 gi|170711808|gb|EDT23990.1| thiamin biosynthesis protein ThiI [Clostridium perfringens B str.
           ATCC 3626]
          Length = 326

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 15/135 (11%), Positives = 31/135 (22%), Gaps = 13/135 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL + SGG DS        D+   V  + F          E    + K+I   +     
Sbjct: 3   RALAMVSGGLDSILAAKLIKDQGIEVIGICFK---SYFFNEENAKRMCKQIDMPLE---- 55

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 ++  +                 +      +  +   +   L          G  
Sbjct: 56  ------VVDFSEEHFEMVKDPKHGRGKNMNPCIDCHAMMMRYSGELLKKFDADFIITGEV 109

Query: 130 NIVIGVCETDYSGYP 144
                + +   +   
Sbjct: 110 LNQRPMSQNRQALNT 124


>gi|110799347|ref|YP_696888.1| thiamin biosynthesis protein ThiI [Clostridium perfringens ATCC
           13124]
 gi|110673994|gb|ABG82981.1| thiamin biosynthesis protein ThiI [Clostridium perfringens ATCC
           13124]
          Length = 326

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 15/135 (11%), Positives = 31/135 (22%), Gaps = 13/135 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL + SGG DS        D+   V  + F          E    + K+I   +     
Sbjct: 3   RALAMVSGGLDSILAAKLIKDQGIEVIGICFK---SYFFNEENAKRMCKQIDMPLE---- 55

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 ++  +                 +      +  +   +   L          G  
Sbjct: 56  ------VVDFSEEHFEMVKDPKHGRGKNMNPCIDCHAMMMRYSGELLKKFDADFIITGEV 109

Query: 130 NIVIGVCETDYSGYP 144
                + +   +   
Sbjct: 110 LNQRPMSQNRQALNT 124


>gi|70727581|ref|YP_254497.1| GMP synthase [Staphylococcus haemolyticus JCSC1435]
 gi|91206831|sp|Q4L386|GUAA_STAHJ RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|68448307|dbj|BAE05891.1| GMP synthase [Staphylococcus haemolyticus JCSC1435]
          Length = 513

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 56/185 (30%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS           D++  +  D+G   K E +    V ++  E      
Sbjct: 220 KVLCAMSGGVDSSVVAVLLHKAIGDQLTCIFVDHGLLRKGEGDM---VMEQFGEGF---- 272

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                        +  I  ++  + +      ++         N    VF    A    +
Sbjct: 273 ------------DMNIIRVNAQERFMDKLKGVSDPEQKRKIIGNEFVYVFDDEAAKLTDV 320

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G   TD          TI++      L  +    +  P+  L K E   L  ++G
Sbjct: 321 DFLAQGTLYTDVIESGTKTAQTIKSHHNVGGLPEDMEFELIEPINTLFKDEVRALGIELG 380

Query: 189 GQDLV 193
             + +
Sbjct: 381 IPEHL 385


>gi|18311192|ref|NP_563126.1| hypothetical protein CPE2210 [Clostridium perfringens str. 13]
 gi|18145875|dbj|BAB81916.1| conserved hypothetical protein [Clostridium perfringens str. 13]
          Length = 326

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 15/135 (11%), Positives = 31/135 (22%), Gaps = 13/135 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL + SGG DS        D+   V  + F          E    + K+I   +     
Sbjct: 3   RALAMVSGGLDSILAAKLIKDQGIEVIGICFK---SYFFNEENAKRMCKQIDMPLE---- 55

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 ++  +                 +      +  +   +   L          G  
Sbjct: 56  ------VVDFSEEHFEMVKDPKHGRGKNMNPCIDCHAMMMRYSGELLKKFDADFIITGEV 109

Query: 130 NIVIGVCETDYSGYP 144
                + +   +   
Sbjct: 110 LNQRPMSQNRQALNT 124


>gi|222823526|ref|YP_002575100.1| GMP synthase (glutamine-hydrolyzing) [Campylobacter lari RM2100]
 gi|254800090|sp|B9KFL4|GUAA_CAMLR RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|222538748|gb|ACM63849.1| GMP synthase (glutamine-hydrolyzing) [Campylobacter lari RM2100]
          Length = 511

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 18/177 (10%), Positives = 44/177 (24%), Gaps = 5/177 (2%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS   +       D+V  +  D G     E        + + +    
Sbjct: 215 NDKVLCAVSGGVDSSVVAALLASAIKDQVVVVFVDNGLLRSGE----KEQVEYMFKHTLG 270

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 +   + L+ L  +      + +                +++ +L         +
Sbjct: 271 IDLISIDAREIFLSRLAGVRDPEQKRKIIGNTFIEVFEEEAKKHKDVKYLAQGTLYTDII 330

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             + +        +             +   +    +  V      + L K   ++ 
Sbjct: 331 ESSVVGASKTIKSHHNVGGLPEKMNLKLIEPLKEIFKDEVRALGMELGLSKDVVYRH 387


>gi|299148581|ref|ZP_07041643.1| GMP synthase [Bacteroides sp. 3_1_23]
 gi|298513342|gb|EFI37229.1| GMP synthase [Bacteroides sp. 3_1_23]
          Length = 507

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 53/187 (28%), Gaps = 21/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D+G                   L    
Sbjct: 214 DKVVLGLSGGVDSSVAAVLLNKAIGKNLTCIFVDHGM------------------LRKNE 255

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             ++ +D+      +  +  S+        + +       +    I      A       
Sbjct: 256 FKNVMKDYECLGLNVIGVDASAKFFAELAGVAEPESKRKIIGKGFIDVFDVEA--HKIKD 313

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G    D           I++      L  + ++ +  PL  L K E  ++ +++
Sbjct: 314 VKWLAQGTIYPDCIESLSITGTVIKSHHNVGGLPEKMNLKLCEPLRLLFKDEVRRVGREL 373

Query: 188 GGQDLVN 194
           G  + + 
Sbjct: 374 GMPEHLI 380


>gi|285018664|ref|YP_003376375.1| argininosuccinate synthase [Xanthomonas albilineans GPE PC73]
 gi|283473882|emb|CBA16384.1| probable argininosuccinate synthase protein [Xanthomonas
          albilineans]
          Length = 406

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 25/55 (45%)

Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
          +L FSGG D+S C+ +  ++   V T+  D G  ++ E +       ++      
Sbjct: 16 VLAFSGGLDTSFCIPYLQEQGYAVHTVFADTGGVDEDERDFIEKRAAELGAASHV 70


>gi|237721354|ref|ZP_04551835.1| bifunctional GMP synthase/glutamine amidotransferase [Bacteroides
           sp. 2_2_4]
 gi|293369434|ref|ZP_06616019.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Bacteroides ovatus SD CMC 3f]
 gi|229449150|gb|EEO54941.1| bifunctional GMP synthase/glutamine amidotransferase [Bacteroides
           sp. 2_2_4]
 gi|292635601|gb|EFF54108.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Bacteroides ovatus SD CMC 3f]
          Length = 507

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 53/187 (28%), Gaps = 21/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D+G                   L    
Sbjct: 214 DKVVLGLSGGVDSSVAAVLLNKAIGKNLTCIFVDHGM------------------LRKNE 255

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             ++ +D+      +  +  S+        + +       +    I      A       
Sbjct: 256 FKNVMKDYECLGLNVIGVDASAKFFAELAGVAEPESKRKIIGKGFIDVFDVEA--HKIKD 313

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G    D           I++      L  + ++ +  PL  L K E  ++ +++
Sbjct: 314 VKWLAQGTIYPDCIESLSITGTVIKSHHNVGGLPEKMNLKLCEPLRLLFKDEVRRVGREL 373

Query: 188 GGQDLVN 194
           G  + + 
Sbjct: 374 GMPEHLI 380


>gi|197286092|ref|YP_002151964.1| sulfate adenylyltransferase subunit 2 [Proteus mirabilis HI4320]
 gi|227356602|ref|ZP_03840989.1| sulfate adenylyltransferase subunit 2 [Proteus mirabilis ATCC
           29906]
 gi|229487587|sp|B4F231|CYSD_PROMH RecName: Full=Sulfate adenylyltransferase subunit 2; AltName:
           Full=ATP-sulfurylase small subunit; AltName:
           Full=Sulfate adenylate transferase; Short=SAT
 gi|194683579|emb|CAR44458.1| sulfate adenylyltransferase subunit 2 [Proteus mirabilis HI4320]
 gi|227163358|gb|EEI48285.1| sulfate adenylyltransferase subunit 2 [Proteus mirabilis ATCC
           29906]
          Length = 302

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 51/176 (28%), Gaps = 13/176 (7%)

Query: 12  LLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++L+S G+DSS  L  A   F         L  D G + +   E R    K+    +  +
Sbjct: 31  VMLYSIGKDSSVMLHLARKAFYPAKLPFPLLHVDTGWKFREMYEFRDKTAKEYGFDLKVY 90

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           ++  G    +   I G   H+ + K   +K             +      F         
Sbjct: 91  RNPQGAQLGINPFIHGSAKHTDIMKTEGLKQA---------LDKYGFDAAFGGARRDEEK 141

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
                      D S   D ++      +       +       PL    + + W+ 
Sbjct: 142 SRAKERIYSFRDRSHRWDPKNQRPELWQNYNGQINKGESIRVFPLSNWTELDIWQY 197


>gi|194476611|ref|YP_002048790.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Paulinella chromatophora]
 gi|171191618|gb|ACB42580.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Paulinella chromatophora]
          Length = 434

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 35/133 (26%), Gaps = 10/133 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                 +  SGG DSS   +  +    +VE L+        +      C  + +++ +  
Sbjct: 43  NKQKIAVGLSGGVDSSLAAALLVKAGWQVEGLTL------WLMSGKGTCCSEGLLDAVGI 96

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR- 125
            +      HI+           +         +    P         +        A R 
Sbjct: 97  CEQLNIPHHIVDSREHFQKQIVAFLL---RGYESGVTPLPCSRCNREVKFPLMLGWAERE 153

Query: 126 LGITNIVIGVCET 138
            GI  I  G    
Sbjct: 154 RGIRKIATGHYAR 166


>gi|188990960|ref|YP_001902970.1| Putative cell cycle protein mesJ homolog. [Xanthomonas campestris
          pv. campestris str. B100]
 gi|167732720|emb|CAP50914.1| Putative cell cycle protein mesJ homolog [Xanthomonas campestris
          pv. campestris]
          Length = 432

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 5/57 (8%)

Query: 11 ALLLFSGGQDSSTCL-SWALDRFDR---VETLSFDYGQRNKVELECRLCVRKKIVEL 63
           L+ +SGG DS+  L + A     R   +  +   +G  +       L  +++   L
Sbjct: 15 VLVAYSGGMDSAVLLHALAATDGYREAGLRAVHVHHG-LHADADAWALHCQQQCAAL 70


>gi|160887083|ref|ZP_02068086.1| hypothetical protein BACOVA_05099 [Bacteroides ovatus ATCC 8483]
 gi|260171605|ref|ZP_05758017.1| GMP synthase [Bacteroides sp. D2]
 gi|315919919|ref|ZP_07916159.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156107494|gb|EDO09239.1| hypothetical protein BACOVA_05099 [Bacteroides ovatus ATCC 8483]
 gi|313693794|gb|EFS30629.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 507

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 53/187 (28%), Gaps = 21/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D+G                   L    
Sbjct: 214 DKVVLGLSGGVDSSVAAVLLNKAIGKNLTCIFVDHGM------------------LRKNE 255

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             ++ +D+      +  +  S+        + +       +    I      A       
Sbjct: 256 FKNVMKDYECLGLNVIGVDASAKFFAELAGVAEPESKRKIIGKGFIDVFDVEA--HKIKD 313

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G    D           I++      L  + ++ +  PL  L K E  ++ +++
Sbjct: 314 VKWLAQGTIYPDCIESLSITGTVIKSHHNVGGLPEKMNLKLCEPLRLLFKDEVRRVGREL 373

Query: 188 GGQDLVN 194
           G  + + 
Sbjct: 374 GMPEHLI 380


>gi|125602995|gb|EAZ42320.1| hypothetical protein OsJ_26892 [Oryza sativa Japonica Group]
          Length = 1297

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 16/41 (39%), Gaps = 1/41 (2%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
           ++      +   SGG DS+   +       DR+  +  D G
Sbjct: 233 MVGPDEHVICALSGGVDSTVAATLVHKAIGDRLHCVFVDNG 273


>gi|115475912|ref|NP_001061552.1| Os08g0326600 [Oryza sativa Japonica Group]
 gi|24414065|dbj|BAC22314.1| putative GMP synthetase [Oryza sativa Japonica Group]
 gi|113623521|dbj|BAF23466.1| Os08g0326600 [Oryza sativa Japonica Group]
 gi|215694477|dbj|BAG89422.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 544

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 16/41 (39%), Gaps = 1/41 (2%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
           ++      +   SGG DS+   +       DR+  +  D G
Sbjct: 233 MVGPDEHVICALSGGVDSTVAATLVHKAIGDRLHCVFVDNG 273


>gi|16264475|ref|NP_437267.1| sulfate adenylyltransferase subunit 2 [Sinorhizobium meliloti 1021]
 gi|15140612|emb|CAC49127.1| putative sulfate adenylyltransferase subunit 2 protein
           [Sinorhizobium meliloti 1021]
          Length = 299

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 53/181 (29%), Gaps = 17/181 (9%)

Query: 12  LLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIV-ELMPK 66
           ++L+S G+DSS  L  A+  F         L  D   + +  +E R  + +++  +L+  
Sbjct: 28  VVLYSIGKDSSVLLHLAMKAFYPAKPPFPFLHVDTKWKFREMIEFRDRMARELGFDLLVH 87

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 E         G    +  +      ++   L            L  A     + 
Sbjct: 88  VNQDGVEQ--------GIGPFTHGSNVHTHVMKTMGLRQALEKYGFDAALAGARRDEEKS 139

Query: 127 GITN-IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                I               R +  +   T +  G    V    PL    +++ W+   
Sbjct: 140 RAKERIFSIRSAQHGWDPQRQRPEMWKTYNTRVGQGETMRV---FPLSNWTEFDIWQYIL 196

Query: 186 D 186
            
Sbjct: 197 R 197


>gi|16262921|ref|NP_435714.1| sulfate adenylyltransferase subunit 2 [Sinorhizobium meliloti 1021]
 gi|307306754|ref|ZP_07586495.1| sulfate adenylyltransferase, small subunit [Sinorhizobium meliloti
           BL225C]
 gi|307322900|ref|ZP_07602192.1| sulfate adenylyltransferase, small subunit [Sinorhizobium meliloti
           AK83]
 gi|128486|sp|P13441|NODP_RHIME RecName: Full=Sulfate adenylyltransferase subunit 2; AltName:
           Full=ATP-sulfurylase small subunit; AltName:
           Full=Nodulation protein P; AltName: Full=Sulfate
           adenylate transferase; Short=SAT
 gi|46312|emb|CAA32913.1| unnamed protein product [Sinorhizobium meliloti]
 gi|152376|gb|AAA26342.1| nodulation protein [Sinorhizobium meliloti]
 gi|14523565|gb|AAK65126.1| NodP1 ATP-sulfurylase small subunit [Sinorhizobium meliloti 1021]
 gi|306891454|gb|EFN22348.1| sulfate adenylyltransferase, small subunit [Sinorhizobium meliloti
           AK83]
 gi|306902045|gb|EFN32643.1| sulfate adenylyltransferase, small subunit [Sinorhizobium meliloti
           BL225C]
          Length = 299

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 53/181 (29%), Gaps = 17/181 (9%)

Query: 12  LLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIV-ELMPK 66
           ++L+S G+DSS  L  A+  F         L  D   + +  +E R  + +++  +L+  
Sbjct: 28  VVLYSIGKDSSVLLHLAMKAFYPAKPPFPFLHVDTKWKFREMIEFRDRMARELGFDLLVH 87

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 E         G    +  +      ++   L            L  A     + 
Sbjct: 88  VNQDGVEQ--------GIGPFTHGSNVHTHVMKTMGLRQALEKYGFDAALAGARRDEEKS 139

Query: 127 GITN-IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                I               R +  +   T +  G    V    PL    +++ W+   
Sbjct: 140 RAKERIFSIRSAQHGWDPQRQRPEMWKTYNTRVGQGETMRV---FPLSNWTEFDIWQYIL 196

Query: 186 D 186
            
Sbjct: 197 R 197


>gi|46202015|ref|ZP_00208351.1| COG0367: Asparagine synthase (glutamine-hydrolyzing)
           [Magnetospirillum magnetotacticum MS-1]
          Length = 587

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 23/72 (31%), Gaps = 2/72 (2%)

Query: 13  LLFSGGQDSSTCLSWAL--DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           +  SGG DSS  ++          +   S  + ++   E      V +         + S
Sbjct: 224 VFLSGGVDSSLVVAMMARFREGRDIHAFSIGFHEKAFDESGYAESVARAWGVDHHVTRFS 283

Query: 71  LGEDHILPLAIL 82
             E   +   IL
Sbjct: 284 DAEMFSVIDEIL 295


>gi|67923153|ref|ZP_00516642.1| Asparagine synthase, glutamine-hydrolyzing [Crocosphaera watsonii
           WH 8501]
 gi|67854995|gb|EAM50265.1| Asparagine synthase, glutamine-hydrolyzing [Crocosphaera watsonii
           WH 8501]
          Length = 500

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 19/53 (35%), Gaps = 2/53 (3%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            SGG DSS   + A      +   +F  G     ++     V   +  +  ++
Sbjct: 227 LSGGLDSSIIAAIAKKHKSELH--TFSVGIAGSKDINAARLVSDYLGTIHHEY 277


>gi|328948875|ref|YP_004366212.1| GMP synthase, small subunit [Treponema succinifaciens DSM 2489]
 gi|328449199|gb|AEB14915.1| GMP synthase, small subunit [Treponema succinifaciens DSM 2489]
          Length = 625

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 54/187 (28%), Gaps = 15/187 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            + LL  SGG DS+   +         RV  L  D G   K E +      K        
Sbjct: 215 KNVLLFLSGGVDSTVAFALLNKALGQKRVLGLHIDNGFMRKNESKKVEEAYK-----NHG 269

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           + + + ED              ++      + +   +   F+  RN +           L
Sbjct: 270 FSNFIVED-------ASKTFLKAVENLTDPQKKRMAIGENFITVRNEVVAKQKFDENKWL 322

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                +                 T       I   +E  + +  PL  L K E   + + 
Sbjct: 323 LAQGTLYPDIIESGGTKNSNVIKTHHNRVDGIQKLIEKGL-IIEPLKDLYKDEVRAIGKK 381

Query: 187 IGGQDLV 193
           +G +D +
Sbjct: 382 LGLEDEL 388


>gi|313500224|gb|ADR61590.1| TRNA(Ile)-lysidine synthase [Pseudomonas putida BIRD-1]
          Length = 427

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 17/50 (34%), Gaps = 5/50 (10%)

Query: 13 LLFSGGQDSSTCLSWALDRFDR-----VETLSFDYGQRNKVELECRLCVR 57
          + FSGG DS+  L    +         +  +   +G +   +     C  
Sbjct: 15 VAFSGGLDSTVLLHLLAEYARNHASPPLRAIHIHHGLQAAADAWPAHCQA 64


>gi|238923969|ref|YP_002937485.1| argininosuccinate synthase [Eubacterium rectale ATCC 33656]
 gi|259585358|sp|C4Z9C9|ASSY_EUBR3 RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|238875644|gb|ACR75351.1| argininosuccinate synthase [Eubacterium rectale ATCC 33656]
 gi|291524715|emb|CBK90302.1| argininosuccinate synthase [Eubacterium rectale DSM 17629]
 gi|291528963|emb|CBK94549.1| argininosuccinate synthase [Eubacterium rectale M104/1]
          Length = 408

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 58/213 (27%), Gaps = 26/213 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM- 64
                +L +SGG D++  + W  + +   V     + GQ  +++            +L  
Sbjct: 1   MKDKVVLAYSGGLDTTAIIPWLKETYDYDVICCCINCGQGEELDGLDERAKLSGASKLYI 60

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
               D   ED+I+P    G +              ++         R  I        A 
Sbjct: 61  EDICDEFSEDYIVPCVQAGAVY-------------EHKYLLGTAMARPGIAKKLVEI-AR 106

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           + G   I  G                  A +  +              M  ++ E     
Sbjct: 107 KEGAVAICHGATGKGNDQIRFELGIKALAPDIKVIAPWRQDNW----KMDSREAEI---- 158

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
            +      ++L    + + Y   R+  +    G
Sbjct: 159 -EYCKAHGIDLPFG-TDSSYSRDRNLWHISHEG 189


>gi|297566590|ref|YP_003685562.1| GMP synthase large subunit [Meiothermus silvanus DSM 9946]
 gi|296851039|gb|ADH64054.1| GMP synthase, large subunit [Meiothermus silvanus DSM 9946]
          Length = 507

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 52/188 (27%), Gaps = 18/188 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSST          D++  +  D+G   + E        + + +    
Sbjct: 210 RDRVMLAVSGGVDSSTLALLLSRAVGDKLTAIFVDHGLLRQGERHEVEAALRPLGDGFRV 269

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +           L  +   S  +     +    +       R +    +       L
Sbjct: 270 VDAA--------EQFLTALKGVSDPEEKRRVVGREFIRVFEAEARKLSQEGYRWLAQGTL 321

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I     E   +          ++      L  +    +  P  +L K E  +LA  
Sbjct: 322 YPDVIESAGGEGAANI---------KSHHNVGGLPPDLKFELLEPFRYLFKDEVRELALL 372

Query: 187 IGGQDLVN 194
           +G  + + 
Sbjct: 373 LGLPEHIR 380


>gi|169334697|ref|ZP_02861890.1| hypothetical protein ANASTE_01100 [Anaerofustis stercorihominis
          DSM 17244]
 gi|169257435|gb|EDS71401.1| hypothetical protein ANASTE_01100 [Anaerofustis stercorihominis
          DSM 17244]
          Length = 405

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 4/86 (4%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               +L +SGG D+ST + W  + +   V  +  D GQ +  E         +      
Sbjct: 1  MKDKIVLAYSGGLDTSTIVPWLKNNYDCEVHAVCVDVGQVDDNEKPDLEKRAIEYGADSI 60

Query: 66 KW---KDSLGEDHILPLAILGDISHS 88
                + L  D+I P+   G    +
Sbjct: 61 DIIDATEELVNDYIFPMLKSGGKYEN 86


>gi|168213686|ref|ZP_02639311.1| thiamin biosynthesis protein ThiI [Clostridium perfringens CPE str.
           F4969]
 gi|169344240|ref|ZP_02865222.1| thiamin biosynthesis protein ThiI [Clostridium perfringens C str.
           JGS1495]
 gi|182626249|ref|ZP_02954006.1| thiamin biosynthesis protein ThiI [Clostridium perfringens D str.
           JGS1721]
 gi|169297699|gb|EDS79799.1| thiamin biosynthesis protein ThiI [Clostridium perfringens C str.
           JGS1495]
 gi|170714850|gb|EDT27032.1| thiamin biosynthesis protein ThiI [Clostridium perfringens CPE str.
           F4969]
 gi|177908428|gb|EDT70966.1| thiamin biosynthesis protein ThiI [Clostridium perfringens D str.
           JGS1721]
          Length = 326

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 15/135 (11%), Positives = 31/135 (22%), Gaps = 13/135 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL + SGG DS        D+   V  + F          E    + K+I   +     
Sbjct: 3   RALAMVSGGLDSILAAKLIKDQGIEVIGICFK---SYFFNEENAKRMCKQIDMPLE---- 55

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 ++  +                 +      +  +   +   L          G  
Sbjct: 56  ------VVDFSEEHFEMVKDPKHGRGKNMNPCIDCHAMMMRYSGELLKKFDADFIITGEV 109

Query: 130 NIVIGVCETDYSGYP 144
                + +   +   
Sbjct: 110 LNQRPMSQNRQALNT 124


>gi|126649625|ref|ZP_01721866.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Bacillus sp. B14905]
 gi|126593950|gb|EAZ87873.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Bacillus sp. B14905]
          Length = 517

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 49/186 (26%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+    K E+E              + 
Sbjct: 223 KKVLCALSGGVDSSVVAVLIHKAIGDQLTCMFVDHNLNRKGEVE--------------QV 268

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             +  ED  + L  +                +                          L 
Sbjct: 269 MKTFTEDFDMNLIKIDARKRFMDKLAGVSDPEKKRKIIGNEFIYVFDEEASKLEGMDFLA 328

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   + E+  S        TI++      L  +    +  PL  L K E   L  ++
Sbjct: 329 QGTLYTDIIESGTS-----TAQTIKSHHNVGGLPEDMQFKLIEPLKTLFKDEVRALGLEL 383

Query: 188 GGQDLV 193
           G  + +
Sbjct: 384 GLDEKI 389


>gi|24374803|ref|NP_718846.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Shewanella oneidensis MR-1]
 gi|44887962|sp|Q8EC52|GUAA_SHEON RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|24349480|gb|AAN56290.1|AE015766_6 GMP synthase [Shewanella oneidensis MR-1]
          Length = 525

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 49/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS            ++  +  D G     E                +  +
Sbjct: 230 VILGLSGGVDSSVVAMLLHRAIGKKLTCVFVDNGLLRLNE--------------AKQVME 275

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+   L +  +   +            +        V              A  L   
Sbjct: 276 MFGDHFGLNIVHVDAENRFLDALKGEADPEAKRKIIGRVFVEIFDEEAKKCVNAKWLAQG 335

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S         I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 336 TIYPDVIESAGSATGKAHV--IKSHHNVGGLPDDMELGLVEPLRELFKDEVRKIGLELGL 393

Query: 190 Q 190
            
Sbjct: 394 P 394


>gi|26988340|ref|NP_743765.1| tRNA(Ile)-lysidine synthetase [Pseudomonas putida KT2440]
 gi|61216636|sp|Q88MG3|TILS_PSEPK RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
          Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
          Full=tRNA(Ile)-lysidine synthetase
 gi|24983090|gb|AAN67229.1|AE016350_2 cell cycle protein MesJ, putative [Pseudomonas putida KT2440]
          Length = 427

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 17/50 (34%), Gaps = 5/50 (10%)

Query: 13 LLFSGGQDSSTCLSWALDRFDR-----VETLSFDYGQRNKVELECRLCVR 57
          + FSGG DS+  L    +         +  +   +G +   +     C  
Sbjct: 15 VAFSGGLDSTVLLHLLAEYARNHASPPLRAIHIHHGLQAAADAWPAHCQA 64


>gi|148549375|ref|YP_001269477.1| tRNA(Ile)-lysidine synthetase [Pseudomonas putida F1]
 gi|148513433|gb|ABQ80293.1| tRNA(Ile)-lysidine synthetase [Pseudomonas putida F1]
          Length = 427

 Score = 43.0 bits (99), Expect = 0.033,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 17/50 (34%), Gaps = 5/50 (10%)

Query: 13 LLFSGGQDSSTCLSWALDRFDR-----VETLSFDYGQRNKVELECRLCVR 57
          + FSGG DS+  L    +         +  +   +G +   +     C  
Sbjct: 15 VAFSGGLDSTVLLHLLAEYARNHASPPLRAIHIHHGLQAAADAWPAHCQA 64


>gi|314935047|ref|ZP_07842406.1| GMP synthase [Staphylococcus caprae C87]
 gi|313652977|gb|EFS16740.1| GMP synthase [Staphylococcus caprae C87]
          Length = 513

 Score = 43.0 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 56/185 (30%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS           D++  +  D+G   K E +    V ++  E      
Sbjct: 220 KVLCAMSGGVDSSVVAVLLHKAIGDQLTCIFVDHGLLRKGEGDM---VMEQFGEGF---- 272

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                        +  I  ++  + +      ++         N    VF    A    +
Sbjct: 273 ------------DMNIIRVNAQDRFMDKLKGVSDPEQKRKIIGNEFVYVFDDEAAKLTDV 320

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G   TD          TI++      L  +    +  P+  L K E   L  ++G
Sbjct: 321 DFLAQGTLYTDVIESGTKTAQTIKSHHNVGGLPEDMEFELIEPINTLFKDEVRALGIELG 380

Query: 189 GQDLV 193
             + +
Sbjct: 381 IPEHL 385


>gi|308187759|ref|YP_003931890.1| GMP synthase [Pantoea vagans C9-1]
 gi|308058269|gb|ADO10441.1| GMP synthase [Pantoea vagans C9-1]
          Length = 526

 Score = 43.0 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 48/184 (26%), Gaps = 17/184 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS           DR+  +  D G    + L     V     +    
Sbjct: 228 NDKVILGLSGGVDSSVTAMLLHRAIGDRLTCVFVDNG---LLRLNEAQQVMDMFGDHFGL 284

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +  +     A+ G     +  K +     +                          
Sbjct: 285 NIIHVPAEMRFLDALAGIDEPEAKRKTIGRVFVEVFDEEALKLQDVKWLAQGT------- 337

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                 I     + +     +   I++      L  E  + +  PL  L K E  K+  +
Sbjct: 338 ------IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLE 391

Query: 187 IGGQ 190
           +G  
Sbjct: 392 LGLP 395


>gi|304398574|ref|ZP_07380446.1| GMP synthase, large subunit [Pantoea sp. aB]
 gi|304353785|gb|EFM18160.1| GMP synthase, large subunit [Pantoea sp. aB]
          Length = 526

 Score = 43.0 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 48/184 (26%), Gaps = 17/184 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS           DR+  +  D G    + L     V     +    
Sbjct: 228 NDKVILGLSGGVDSSVTAMLLHRAIGDRLTCVFVDNG---LLRLNEAQQVMDMFGDHFGL 284

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +  +     A+ G     +  K +     +                          
Sbjct: 285 NIIHVPAEMRFLDALAGIDEPEAKRKTIGRVFVEVFDEEALKLQDVKWLAQGT------- 337

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                 I     + +     +   I++      L  E  + +  PL  L K E  K+  +
Sbjct: 338 ------IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLE 391

Query: 187 IGGQ 190
           +G  
Sbjct: 392 LGLP 395


>gi|261403032|ref|YP_003247256.1| hypothetical protein Metvu_0916 [Methanocaldococcus vulcanius M7]
 gi|261370025|gb|ACX72774.1| conserved hypothetical protein [Methanocaldococcus vulcanius M7]
          Length = 261

 Score = 43.0 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 7/70 (10%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           N  I++ P A++ FSGG DS+T    A      +E +S         +      ++  I 
Sbjct: 56  NVSIEEKPRAVIAFSGGVDSTTSAVIA-KNIFDIEAVSCY------SKYIMTEKLKHDID 108

Query: 62  ELMPKWKDSL 71
            L  K    +
Sbjct: 109 ALSKKINLKI 118


>gi|225175995|ref|ZP_03729987.1| Argininosuccinate synthase [Dethiobacter alkaliphilus AHT 1]
 gi|225168583|gb|EEG77385.1| Argininosuccinate synthase [Dethiobacter alkaliphilus AHT 1]
          Length = 401

 Score = 43.0 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 49/154 (31%), Gaps = 9/154 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM-PK 66
              +L +SGG D+S  ++W  +++   V  ++ D GQ  ++E      ++    +L    
Sbjct: 2   KKIILAYSGGLDTSIAITWLKEKYNCEVVAMAADVGQGEELEPLHEKAMKSGASKLYIED 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            ++    D + P+   G +                 +    +  R +         A   
Sbjct: 62  VREEFVRDFVFPMVKSGALY-------EEKYFLGTAIARPAIAKRLVEVAAKEGADAIAH 114

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           G T         + +      H  I A      +
Sbjct: 115 GATGKGNDQVRFELTIKALAPHLKIVAPWREWEI 148


>gi|223043330|ref|ZP_03613376.1| GMP synthase [glutamine-hydrolyzing] (Glutamineamidotransferase)
           (GMP synthetase) [Staphylococcus capitis SK14]
 gi|222443119|gb|EEE49218.1| GMP synthase [glutamine-hydrolyzing] (Glutamineamidotransferase)
           (GMP synthetase) [Staphylococcus capitis SK14]
          Length = 513

 Score = 43.0 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 56/185 (30%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS           D++  +  D+G   K E +    V ++  E      
Sbjct: 220 KVLCAMSGGVDSSVVAVLLHKAIGDQLTCIFVDHGLLRKGEGDM---VMEQFGEGF---- 272

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                        +  I  ++  + +      ++         N    VF    A    +
Sbjct: 273 ------------DMNIIRVNAQDRFMDKLKGVSDPEQKRKIIGNEFVYVFDDEAAKLTDV 320

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G   TD          TI++      L  +    +  P+  L K E   L  ++G
Sbjct: 321 DFLAQGTLYTDVIESGTKTAQTIKSHHNVGGLPEDMEFELIEPINTLFKDEVRALGIELG 380

Query: 189 GQDLV 193
             + +
Sbjct: 381 IPEHL 385


>gi|18978130|ref|NP_579487.1| n-type ATP pyrophosphatase superfamily protein [Pyrococcus furiosus
           DSM 3638]
 gi|18893931|gb|AAL81882.1| n-type ATP pyrophosphatase superfamily [Pyrococcus furiosus DSM
           3638]
          Length = 319

 Score = 43.0 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 39/116 (33%), Gaps = 12/116 (10%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTC---LSWALDRF-DRVETLSFDYGQRNKVELECRLCVR 57
             +IK+     +  SGG+DS      L+    +F   +  ++ D G +     +  + V 
Sbjct: 41  YRMIKRGEKVGVAVSGGKDSVVLMHILAKLRKKFPFELVAITIDEGIK--GYRDKSVEVA 98

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
           +K  EL+        E HI         +     + +  + +     +     R  
Sbjct: 99  RKNAELL------GVEHHIYRFKDFIGFTLDETVEIMGPREERVGACSYCGVWRRW 148


>gi|313905897|ref|ZP_07839253.1| sulfate adenylyltransferase, small subunit [Eubacterium
           cellulosolvens 6]
 gi|313469238|gb|EFR64584.1| sulfate adenylyltransferase, small subunit [Eubacterium
           cellulosolvens 6]
          Length = 301

 Score = 43.0 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 53/182 (29%), Gaps = 14/182 (7%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIVELM 64
              ++L+S G+DSS  L  AL  F         L  +   + +  +E R  V KK    M
Sbjct: 26  EKPVMLYSIGKDSSVMLHLALKAFYPEKPPFPFLHVNTTWKFREMIEFRDAVAKKYGLNM 85

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            ++ +  G    +     G      +      +  D+        G              
Sbjct: 86  LEYINEDGVARGINPFDHGSAYTDIMKTQALKQALDHYGFTAAFGGGRRDE-------EK 138

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                 I             + R +  +   T +  G E  V    PL    + + W+  
Sbjct: 139 SRAKERIFSFRNSAHAWDPKNQRPEMWKLFNTRLFKGEEVRV---FPLSNWTEKDIWQYI 195

Query: 185 QD 186
           + 
Sbjct: 196 RR 197


>gi|312897992|ref|ZP_07757401.1| argininosuccinate synthase [Megasphaera micronuciformis F0359]
 gi|310620917|gb|EFQ04468.1| argininosuccinate synthase [Megasphaera micronuciformis F0359]
          Length = 423

 Score = 43.0 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 20/45 (44%), Gaps = 2/45 (4%)

Query: 2  NDIIKKAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQ 44
          +  + +    +L +SGG D+S  + W  +      V  +  D GQ
Sbjct: 14 SSNMSEIKKIVLAYSGGLDTSVIIPWLKENYNGSEVIAVCADVGQ 58


>gi|307315861|ref|ZP_07595367.1| sulfate adenylyltransferase, small subunit [Sinorhizobium meliloti
           BL225C]
 gi|306898485|gb|EFN29166.1| sulfate adenylyltransferase, small subunit [Sinorhizobium meliloti
           BL225C]
          Length = 299

 Score = 43.0 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 49/180 (27%), Gaps = 15/180 (8%)

Query: 12  LLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++L+S G+DSS  L  A+  F         L  D   + +  +E R  + +++       
Sbjct: 28  VVLYSIGKDSSVLLHLAMKAFYPAKRPFPFLHVDTKWKFREMIEFRDRMARELG------ 81

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              L           G    +  +      ++   L            L  A     +  
Sbjct: 82  -FDLLVHVNQDGIDQGIGPFTHGSNVHTHVMKTMGLRQALEKYGFDAALAGARRDEEKSR 140

Query: 128 ITN-IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I               R +  +   T   +G    + V        +++ W+    
Sbjct: 141 AKERIFSIRSAQHGWDPQRQRPEMWKTYNT--WVGQGETMRVFPLS-NWTEFDIWQYILR 197


>gi|300770964|ref|ZP_07080841.1| NAD synthetase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300762237|gb|EFK59056.1| NAD synthetase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 546

 Score = 43.0 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 38/113 (33%), Gaps = 16/113 (14%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR--FDRVETLSF--DYGQRNKVELECRLCVRKKIVELM 64
             A L  SGG DS+   + A +    + V  +     Y   +             + + +
Sbjct: 290 KKATLGLSGGLDSAVVAALACEAIGAENVLAILMPSVYSSDHS------------LKDAL 337

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
              K++  + HI+P+  +      +L+K       D    N     R  + + 
Sbjct: 338 DLVKNTGCQHHIIPIKDVAQAFEGTLSKVFEGLQPDTTEENIQARTRGTLLMA 390


>gi|53802427|ref|YP_112824.1| GMP synthase [Methylococcus capsulatus str. Bath]
 gi|81683037|sp|Q60C21|GUAA_METCA RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|53756188|gb|AAU90479.1| GMP synthase [Methylococcus capsulatus str. Bath]
          Length = 524

 Score = 43.0 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 54/188 (28%), Gaps = 25/188 (13%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMP 65
           A   +L  SGG DSS   +       +++  +  D G  R     +      + +   + 
Sbjct: 226 AERVVLGLSGGVDSSVVAALLQHAIGEQLTCVFVDTGLLRLNEGDQVMATFAEHMGVRVI 285

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +               L  +   +  ++              + GR  + +      A  
Sbjct: 286 RVNAE--------ERFLQALQGIADPEDKRK-----------IIGRLFVEIFDEEA-AKI 325

Query: 126 LGITNIVI---GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
                +          + +G    +   I++      L     + +  PL  L K E  +
Sbjct: 326 EDARWLAQGTIYPDVIESAGSKTGKAHVIKSHHNVGGLPETMKLQLVEPLRELFKDEVRQ 385

Query: 183 LAQDIGGQ 190
           +  ++G  
Sbjct: 386 IGLELGLP 393


>gi|320449367|ref|YP_004201463.1| argininosuccinate synthase [Thermus scotoductus SA-01]
 gi|320149536|gb|ADW20914.1| argininosuccinate synthase [Thermus scotoductus SA-01]
          Length = 400

 Score = 43.0 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 2/80 (2%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKI-VELMPKW 67
            +L +SGG D+S  L W  + +   V   + D GQ  +VE      +R      +    
Sbjct: 2  KIVLAYSGGLDTSIILKWLKETYKAEVIAFTADIGQGEEVEEAREKALRTGASKAIALDL 61

Query: 68 KDSLGEDHILPLAILGDISH 87
          ++    D + P+   G +  
Sbjct: 62 REEFVRDFVFPMFRAGAVYE 81


>gi|301768891|ref|XP_002919862.1| PREDICTED: asparagine synthetase [glutamine-hydrolyzing]-like
           [Ailuropoda melanoleuca]
 gi|281350501|gb|EFB26085.1| hypothetical protein PANDA_008523 [Ailuropoda melanoleuca]
          Length = 561

 Score = 43.0 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 34/127 (26%), Gaps = 4/127 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVE---TL-SFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            L SGG DSS   +  L +         L +F  G  +  +L     V   I     +  
Sbjct: 255 CLLSGGLDSSLVAATLLKQLKEAHVQYPLQTFAIGMEDSTDLLAARKVANHIGSEHHEVL 314

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  E   +   ++  +    +T   A                +++      +     G 
Sbjct: 315 FNSEEGIQVLDEVIFSLETYDITTIRASVGMYLVSKYIRKNTDSVVIFSGEGSDELTQGY 374

Query: 129 TNIVIGV 135
                  
Sbjct: 375 IYFHKAP 381


>gi|148980239|ref|ZP_01815947.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Vibrionales bacterium SWAT-3]
 gi|145961333|gb|EDK26642.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Vibrionales bacterium SWAT-3]
          Length = 517

 Score = 43.0 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 52/181 (28%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS     A     D++  +  D G     E                +  +
Sbjct: 222 VILGLSGGVDSSVVAMLAHRAIGDKLTCVFVDNGLLRLNE--------------ADQVME 267

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G    L +  +              + +        V            + A  L   
Sbjct: 268 MFGNKFGLNIIKVDAEDRFLKALEGEAEPEAKRKIIGHVFVDIFDEESKKLSNAKWLAQG 327

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S     +   I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 328 TIYPDVIESAAS--KTGKAHVIKSHHNVGGLPDDMEMGLVEPLRELFKDEVRKIGLELGL 385

Query: 190 Q 190
            
Sbjct: 386 P 386


>gi|123969180|ref|YP_001010038.1| carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus
           str. AS9601]
 gi|123199290|gb|ABM70931.1| Carbon-nitrogen hydrolase:NAD+ synthase [Prochlorococcus marinus
           str. AS9601]
          Length = 565

 Score = 43.0 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 25/196 (12%), Positives = 56/196 (28%), Gaps = 19/196 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +AL+  SGG DS+   + A      + V  +S      +         + +++      
Sbjct: 297 KTALVGLSGGIDSALVSAIATAALGSENVYCVSMPSKWSSSHSKIDAKDLARRLK----- 351

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     +P+  L +    S  K +  ++ +  + N  +  R    L+ A     + 
Sbjct: 352 -----ISFKSIPIENLMNSFEESFIKTIDFEMAE--ITNQNIQSRIRGTLLMALANQEKH 404

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                ++                          +G      V     WL   ++    + 
Sbjct: 405 -----LLLSTGNKSELAVGYCTLYGDMNGGLSVIGDLYKTNVFKLCNWLDSEDSINHRKS 459

Query: 187 IGGQDLVNLILEESHT 202
                 V++I +   T
Sbjct: 460 YMLDTNVDIIGKNIRT 475


>gi|94263083|ref|ZP_01286902.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [delta
           proteobacterium MLMS-1]
 gi|93456626|gb|EAT06734.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [delta
           proteobacterium MLMS-1]
          Length = 443

 Score = 43.0 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 51/179 (28%), Gaps = 12/179 (6%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +  SGG DSS   +        V  +     Q    E+E        + + +        
Sbjct: 80  VAMSGGVDSSVTAALLQQAGAEVRGVFMRLAQ---PEVEAHRQRAAAVADFL------GI 130

Query: 73  EDHILPLA-ILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
           E  +L LA        +   +     +  N         +  + L         L  T  
Sbjct: 131 ELTVLDLAQPFRQQVLNPFVEAYLAGLTPNPCVFCNRLIKFGLLLEILLAQGVELLATGH 190

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
            + +      G   CR       ++     L  E    +  PL    K E ++LA  +G
Sbjct: 191 YVRLLPAATGGRRLCRGLDPGKDQSYFLCRLAAEKLPRLLFPLGDKHKSEVYQLAARLG 249


>gi|52841950|ref|YP_095749.1| GMP synthase [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
 gi|81377336|sp|Q5ZUS0|GUAA_LEGPH RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|52629061|gb|AAU27802.1| GMP synthetase [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
          Length = 525

 Score = 43.0 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 48/185 (25%), Gaps = 16/185 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS   +       +++  +  D G    + L     V       M  
Sbjct: 226 TEKVLLGLSGGVDSSVVAALLHRAIGEQLVCVFVDTG---LLRLNEAEQVLSMFGRHMGI 282

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              ++  +     A+ G        K +     +                          
Sbjct: 283 RIIAVNAEDKFLTALKGVTCPEEKRKIIGRTFIEVFDEEAQKLTEIKWL----------- 331

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                +        +   +     I++      L    ++ +  P+  L K E  ++  +
Sbjct: 332 -AQGTIYPDVIESAATSTNDAAVVIKSHHNVGGLPDTLNLKLLEPIRELFKDEVRQVGLE 390

Query: 187 IGGQD 191
           +G   
Sbjct: 391 LGLPH 395


>gi|68249007|ref|YP_248119.1| putative cell cycle protein MesJ [Haemophilus influenzae
          86-028NP]
 gi|81336582|sp|Q4QND8|TILS_HAEI8 RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
          Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
          Full=tRNA(Ile)-lysidine synthetase
 gi|68057206|gb|AAX87459.1| putative cell cycle protein MesJ [Haemophilus influenzae
          86-028NP]
          Length = 430

 Score = 43.0 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 30/84 (35%), Gaps = 8/84 (9%)

Query: 1  MNDIIKKAPSA-----LLLFSGGQDSSTCL---SWALDRFDRVETLSFDYGQRNKVELEC 52
          ++DI K+   A     L+  SGG DS+  L   +    +   +  LS      +      
Sbjct: 4  LSDIEKQLQKATAQGFLIALSGGLDSTVLLSLFAKLCQKQPHLPPLSVRAIHIHHGLSPN 63

Query: 53 RLCVRKKIVELMPKWKDSLGEDHI 76
               K    L  +++  L  + +
Sbjct: 64 ADSWAKHCQNLCDQFQIPLIIERV 87


>gi|115526688|ref|YP_783599.1| tRNA(Ile)-lysidine synthetase-like [Rhodopseudomonas palustris
          BisA53]
 gi|115520635|gb|ABJ08619.1| tRNA(Ile)-lysidine synthetase [Rhodopseudomonas palustris BisA53]
          Length = 343

 Score = 43.0 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 7/51 (13%)

Query: 11 ALLL-FSGGQDSSTCLSW------ALDRFDRVETLSFDYGQRNKVELECRL 54
          A++L  SGG DS   +        AL R   +  ++ D+G R     E R 
Sbjct: 26 AIVLAVSGGPDSLALMVLAARWRAALKRGPELIAVTIDHGLREASAREARD 76


>gi|261368759|ref|ZP_05981642.1| argininosuccinate synthase [Subdoligranulum variabile DSM 15176]
 gi|282569181|gb|EFB74716.1| argininosuccinate synthase [Subdoligranulum variabile DSM 15176]
          Length = 412

 Score = 43.0 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 26/59 (44%), Gaps = 2/59 (3%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVR 57
          M    +     +L +SGG D+S  + W  + +    V  +S D GQ  +++      ++
Sbjct: 1  MKKNKEDIKKVVLAYSGGLDTSIIIPWLKENYNNCEVIAVSGDVGQGTELDGLEEKAIK 59


>gi|224373095|ref|YP_002607467.1| argininosuccinate synthase [Nautilia profundicola AmH]
 gi|223588443|gb|ACM92179.1| argininosuccinate synthase [Nautilia profundicola AmH]
          Length = 400

 Score = 43.0 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 49/153 (32%), Gaps = 5/153 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +L +SGG D+S  L W  D +   V T + D GQ  +VE E R    K  V+    + 
Sbjct: 2   KVVLAYSGGLDTSIILKWLQDTYNAEVVTFTADIGQGEEVE-EAREKAIKLGVKPENIFI 60

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           + L ED +            +        +   ++    +  R I         A   G 
Sbjct: 61  EDLREDFVRDYVF---PMFRANAIYEGEYLLGTSIARPLIAKRQIEIAKQVGAEAVAHGA 117

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLG 161
           T         +   Y       + A     +L 
Sbjct: 118 TGKGNDQVRFELGYYALKPDIKVIAPWREWDLN 150


>gi|304321565|ref|YP_003855208.1| GMP synthase [Parvularcula bermudensis HTCC2503]
 gi|303300467|gb|ADM10066.1| GMP synthase [Parvularcula bermudensis HTCC2503]
          Length = 524

 Score = 43.0 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 53/186 (28%), Gaps = 24/186 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+       +   D++  +  D G   + E        + +V+L  +  
Sbjct: 229 RVICGLSGGVDSAVAAVLIHEAIGDQLTCVFVDTGLMRQGE-------ARAVVDLFREHY 281

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                        L  +             +    P          F+      A ++  
Sbjct: 282 HIPLVHVEAEDLFLSKL-------------EGVEDPERKRKIIGGTFIDVFEAEAKKIKG 328

Query: 129 TNIVI---GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
             +          +   +      TI++      L    ++ +  PL  L K E   L Q
Sbjct: 329 DFLAQGTLYPDVIESVSFDGGPSVTIKSHHNVGGLPERMNLKLVEPLRELFKDEVRHLGQ 388

Query: 186 DIGGQD 191
           ++G  +
Sbjct: 389 ELGLPE 394


>gi|113969579|ref|YP_733372.1| GMP synthase [Shewanella sp. MR-4]
 gi|117919685|ref|YP_868877.1| GMP synthase [Shewanella sp. ANA-3]
 gi|123130599|sp|Q0HKV2|GUAA_SHESM RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226739734|sp|A0KUK2|GUAA_SHESA RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|113884263|gb|ABI38315.1| GMP synthase (glutamine-hydrolyzing) [Shewanella sp. MR-4]
 gi|117612017|gb|ABK47471.1| GMP synthase (glutamine-hydrolyzing) [Shewanella sp. ANA-3]
          Length = 525

 Score = 43.0 bits (99), Expect = 0.034,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 49/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS            ++  +  D G     E                +  +
Sbjct: 230 VILGLSGGVDSSVVAMLLHRAIGKKLTCVFVDNGLLRLNE--------------AKQVME 275

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+   L +  +   +            +        V              A  L   
Sbjct: 276 MFGDHFGLNIVHVDAENRFLDALKGEADPEAKRKIIGRVFVEIFDEEAKKCVNAKWLAQG 335

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S         I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 336 TIYPDVIESAGSATGKAHV--IKSHHNVGGLPDDMELGLVEPLRELFKDEVRKIGLELGL 393

Query: 190 Q 190
            
Sbjct: 394 P 394


>gi|330007868|ref|ZP_08306090.1| GMP synthase domain protein [Klebsiella sp. MS 92-3]
 gi|328535280|gb|EGF61768.1| GMP synthase domain protein [Klebsiella sp. MS 92-3]
          Length = 543

 Score = 43.0 bits (99), Expect = 0.035,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 48/183 (26%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V +   +     
Sbjct: 246 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAQQVMEMFGDHFGLN 302

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 303 IVHVEGEQRFLDALAGESDPEAKRKIIGRVFVEVFDEEALKLDDVKWLAQGT-------- 354

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 355 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLRELFKDEVRKIGLEL 409

Query: 188 GGQ 190
           G  
Sbjct: 410 GLP 412


>gi|294672865|ref|YP_003573481.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Prevotella ruminicola 23]
 gi|294474344|gb|ADE83733.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Prevotella ruminicola 23]
          Length = 359

 Score = 43.0 bits (99), Expect = 0.035,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 23/78 (29%), Gaps = 2/78 (2%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
          MN    +     +L SGG DSS  +          +      G   + E +C     + +
Sbjct: 1  MNIKDIENKRIAVLLSGGVDSSVVVYEFARMGLHPDCFYIKIGPEEEEEWDCSSE--EDL 58

Query: 61 VELMPKWKDSLGEDHILP 78
                      +  ++ 
Sbjct: 59 EMATAVSHKFGCKLEVID 76


>gi|288818620|ref|YP_003432968.1| GMP synthase [Hydrogenobacter thermophilus TK-6]
 gi|288788020|dbj|BAI69767.1| GMP synthase [Hydrogenobacter thermophilus TK-6]
 gi|308752211|gb|ADO45694.1| GMP synthase, large subunit [Hydrogenobacter thermophilus TK-6]
          Length = 507

 Score = 43.0 bits (99), Expect = 0.035,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 56/187 (29%), Gaps = 23/187 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K    +   SGG DS+   +       + ++ +  D+G   K E++      + +     
Sbjct: 212 KDGKVICALSGGVDSTVAATLTYKAIGNNLKCIFVDHGLLRKGEVQEVEGYFRSLS---- 267

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  +   L L+ L  +      + +                    F+      A +
Sbjct: 268 -LPFKTVDAKELFLSRLRGVEDPEEKRRIVGYT----------------FIEVFEEEAKK 310

Query: 126 LGITNIVIGVCETD-YSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           +G   ++ G    D            I+       L     + +  PL  L K E  ++ 
Sbjct: 311 VGADFLLQGTLYPDVVESAGLPGAKVIKTHHNVGGLPERLGIKLLEPLRELFKDEVRQIG 370

Query: 185 QDIGGQD 191
           + +G  +
Sbjct: 371 RSLGLPE 377


>gi|262040239|ref|ZP_06013490.1| GMP synthase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|259042348|gb|EEW43368.1| GMP synthase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
          Length = 525

 Score = 43.0 bits (99), Expect = 0.035,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 48/183 (26%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V +   +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAQQVMEMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IVHVEGEQRFLDALAGESDPEAKRKIIGRVFVEVFDEEALKLDDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLRELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|254293914|ref|YP_003059937.1| sulfate adenylyltransferase subunit 2 [Hirschia baltica ATCC 49814]
 gi|254042445|gb|ACT59240.1| sulfate adenylyltransferase, small subunit [Hirschia baltica ATCC
           49814]
          Length = 306

 Score = 43.0 bits (99), Expect = 0.035,   Method: Composition-based stats.
 Identities = 23/189 (12%), Positives = 53/189 (28%), Gaps = 14/189 (7%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCV 56
           M ++  +A   ++L+S G+DS+  L  A   F         +  D   + K   E R   
Sbjct: 25  MREVAAEAEKPVMLYSVGKDSAVMLHLAKKAFYPSPPPFPLMHVDTTWKFKAMYELREKA 84

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
            K     +  +++   ++  +     G +       +  M   +         G +  F 
Sbjct: 85  AKDAGMELIVYQNPEAKEKGINPFDHGSL-------HTDMWKTEGLKQALTKYGFDAAFG 137

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
                         I             + R +  +     +    +  + V        
Sbjct: 138 GARRDEEKSRAKERIFSFRTANHRWDPKNQRPELWKQYN--MRKAKDESIRVFPIS-NWT 194

Query: 177 KYETWKLAQ 185
           + + W+   
Sbjct: 195 ELDIWQYIH 203


>gi|153951972|ref|YP_001398910.1| hypothetical protein JJD26997_1992 [Campylobacter jejuni subsp.
          doylei 269.97]
 gi|152939418|gb|ABS44159.1| thiamine biosynthesis protein:ExsB [Campylobacter jejuni subsp.
          doylei 269.97]
          Length = 349

 Score = 43.0 bits (99), Expect = 0.035,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
           AL LFSGG DS   +     +   V+ L+ + G
Sbjct: 24 KALALFSGGLDSMLAMKLITTQGIEVKALNINIG 57


>gi|152971364|ref|YP_001336473.1| GMP synthase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|238895961|ref|YP_002920697.1| GMP synthase [Klebsiella pneumoniae NTUH-K2044]
 gi|226739636|sp|A6TCC2|GUAA_KLEP7 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|150956213|gb|ABR78243.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|238548279|dbj|BAH64630.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 525

 Score = 43.0 bits (99), Expect = 0.035,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 48/183 (26%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V +   +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAQQVMEMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IVHVEGEQRFLDALAGESDPEAKRKIIGRVFVEVFDEEALKLDDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLRELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|307264948|ref|ZP_07546509.1| argininosuccinate synthase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|326390048|ref|ZP_08211610.1| argininosuccinate synthase [Thermoanaerobacter ethanolicus JW 200]
 gi|306919933|gb|EFN50146.1| argininosuccinate synthase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|325993913|gb|EGD52343.1| argininosuccinate synthase [Thermoanaerobacter ethanolicus JW 200]
          Length = 410

 Score = 43.0 bits (99), Expect = 0.035,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 54/185 (29%), Gaps = 19/185 (10%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQ----RNKVELECRLCVRKK 59
           + K    +L +SGG D+S  + W  + +   +     D GQ    ++  +        K 
Sbjct: 1   MLKGEKVVLAYSGGLDTSVIIPWLKENYECEIIAACIDVGQGEELKHIKDKALASGASKV 60

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
            +E     K+   +D+I P    G +         +M           +  + +      
Sbjct: 61  YIE---DVKEEFVKDYIFPTLKAGAVYEGKYLLGTSMARP-------LIAKKLVEIAHKE 110

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL----GMESHVTVHTPLMWL 175
              A   G T         + S +       I A     +L        +       + +
Sbjct: 111 GAKAIAHGATGKGNDQVRFEVSIHALDPSIKIIAPWRIWDLKSREDEIDYAKKKGIPIPV 170

Query: 176 KKYET 180
            K + 
Sbjct: 171 TKEKI 175


>gi|262374642|ref|ZP_06067915.1| GMP synthase domain-containing protein [Acinetobacter junii SH205]
 gi|262310432|gb|EEY91523.1| GMP synthase domain-containing protein [Acinetobacter junii SH205]
          Length = 522

 Score = 43.0 bits (99), Expect = 0.035,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 51/189 (26%), Gaps = 19/189 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPK 66
              LL  SGG DSS   +       D++  +  D G  R     +      + +      
Sbjct: 225 EKVLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRLNEGDQVMQMFAENMG----- 279

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     +  A   +   ++L   V  + +   +   F+                  
Sbjct: 280 --------IRVIRADAEERFLTALAGEVDPEKKRKIIGREFIEVFAEEARKLDGVKFLAQ 331

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G           + +     +   I++      L  +    +  PL  L K E  KL   
Sbjct: 332 GTIY----PDVIESAASKQGKAHVIKSHHNVGGLPEDLAFDLVEPLRDLFKDEVRKLGTT 387

Query: 187 IGGQDLVNL 195
           +G    +  
Sbjct: 388 LGLPHSMIY 396


>gi|260886355|ref|ZP_05897618.1| argininosuccinate synthase [Selenomonas sputigena ATCC 35185]
 gi|330838873|ref|YP_004413453.1| argininosuccinate synthase [Selenomonas sputigena ATCC 35185]
 gi|260863876|gb|EEX78376.1| argininosuccinate synthase [Selenomonas sputigena ATCC 35185]
 gi|329746637|gb|AEB99993.1| argininosuccinate synthase [Selenomonas sputigena ATCC 35185]
          Length = 406

 Score = 43.0 bits (99), Expect = 0.035,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 56/198 (28%), Gaps = 16/198 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKI-VEL 63
           K    +L +SGG D+S  + W  +      V     D GQ ++V       ++       
Sbjct: 5   KVKKVVLAYSGGLDTSVIIPWLKENYDGCEVIAACVDIGQGDEVAPVHDKALKSGASKAY 64

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +        ED++         +  +        +   +     +  R +         A
Sbjct: 65  VEDLTQEFLEDYV-------WPTLKAQAVYEGKYLLGTSFARPLIAKRLVEIAKEEGADA 117

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              G T         + +      + TI A      LG        T  +   K     +
Sbjct: 118 IAHGATGKGNDQVRFELTIKALAPNLTIIAPWREWELGAR------TEEIEYAKKHGIPV 171

Query: 184 AQDIGGQDLVNLILEESH 201
           A++     +   I   SH
Sbjct: 172 AEENKTYSMDRNIWHLSH 189


>gi|15835060|ref|NP_296819.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Chlamydia muridarum Nigg]
 gi|270285228|ref|ZP_06194622.1| GMP synthase [Chlamydia muridarum Nigg]
 gi|270289247|ref|ZP_06195549.1| GMP synthase [Chlamydia muridarum Weiss]
 gi|301336623|ref|ZP_07224825.1| GMP synthase [Chlamydia muridarum MopnTet14]
 gi|13627143|sp|Q9PKM3|GUAA_CHLMU RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|7190487|gb|AAF39296.1| GMP synthase [Chlamydia muridarum Nigg]
          Length = 512

 Score = 43.0 bits (99), Expect = 0.035,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 60/194 (30%), Gaps = 20/194 (10%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
            + + +    LL  SGG DSS       +   DR+  +  D G   K E+E        +
Sbjct: 211 REKVGETERVLLGLSGGVDSSVLAVLLHNALGDRLSCVFVDTGLLRKNEVEEVKQQFSSL 270

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
              +        E     L+ +                 ++      V G   I +   A
Sbjct: 271 G--LEILVVDASEKFFHDLSGI-----------------EDPEQKRKVIGAAFIEVFDEA 311

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           +    +          +   S         I++      L  + ++ +  PL +L K E 
Sbjct: 312 SKNLDVQWLAQGTIYSDVIESAKSCDATQVIKSHHNVGGLPEKLNLKLLEPLRFLFKDEV 371

Query: 181 WKLAQDIGGQDLVN 194
             L + +G  D++ 
Sbjct: 372 RALGKVLGLPDVLI 385


>gi|147669399|ref|YP_001214217.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Dehalococcoides sp. BAV1]
 gi|289432665|ref|YP_003462538.1| GMP synthase, large subunit [Dehalococcoides sp. GT]
 gi|146270347|gb|ABQ17339.1| GMP synthase (glutamine-hydrolyzing) [Dehalococcoides sp. BAV1]
 gi|288946385|gb|ADC74082.1| GMP synthase, large subunit [Dehalococcoides sp. GT]
          Length = 560

 Score = 43.0 bits (99), Expect = 0.035,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 58/185 (31%), Gaps = 17/185 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+   S       D++  +  + G   + E +  L V K  + +   + D
Sbjct: 265 VICALSGGVDSAVVASLIHKAIGDQLTCIYVNNGLLRREEADRTLHVFKNHMGMKIIYVD 324

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++       L  LG I+     + V          +       I FL             
Sbjct: 325 AIDRF----LESLGGITDPEQKRKVIGSEFIKVFEDEACKLGQIDFLAQGT--------- 371

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
              +     +           I++      L     + +  PL +L K E   L +++G 
Sbjct: 372 ---LYPDVIESVSSVSKASAKIKSHHNVGGLPAHMKLKLIEPLRYLFKDEVRLLGKELGL 428

Query: 190 QDLVN 194
            D + 
Sbjct: 429 PDEMI 433


>gi|294501526|ref|YP_003565226.1| argininosuccinate synthase [Bacillus megaterium QM B1551]
 gi|295706874|ref|YP_003599949.1| argininosuccinate synthase [Bacillus megaterium DSM 319]
 gi|294351463|gb|ADE71792.1| argininosuccinate synthase [Bacillus megaterium QM B1551]
 gi|294804533|gb|ADF41599.1| argininosuccinate synthase [Bacillus megaterium DSM 319]
          Length = 402

 Score = 43.0 bits (99), Expect = 0.035,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
           P  +L +SGG D+S  + W  ++   V     D G
Sbjct: 3  NPKVVLAYSGGLDTSVAIKWLQEKGYDVVACCLDVG 38


>gi|224542846|ref|ZP_03683385.1| hypothetical protein CATMIT_02038 [Catenibacterium mitsuokai DSM
          15897]
 gi|224524221|gb|EEF93326.1| hypothetical protein CATMIT_02038 [Catenibacterium mitsuokai DSM
          15897]
          Length = 407

 Score = 43.0 bits (99), Expect = 0.035,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 1/54 (1%)

Query: 6  KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
          K     +L +SGG D+S  +SW  +     V  ++ D GQ             K
Sbjct: 4  KTFKKVVLAYSGGLDTSIIISWLKENYGCEVIAVAADVGQGAGELDGLDEKAAK 57


>gi|218708651|ref|YP_002416272.1| GMP synthase [Vibrio splendidus LGP32]
 gi|254800125|sp|B7VJU8|GUAA_VIBSL RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|218321670|emb|CAV17624.1| GMP synthase [Vibrio splendidus LGP32]
          Length = 517

 Score = 43.0 bits (99), Expect = 0.035,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 53/181 (29%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS     A     D++  +  D G     E E              +  +
Sbjct: 222 VILGLSGGVDSSVVAMLAHRAIGDKLTCVFVDNGLLRLNEGE--------------QVME 267

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+   L +  +              + +        V              A  L   
Sbjct: 268 MFGDQFGLNIIKVDAEDRFLDALEGEAEPEAKRKIIGHVFVDIFDEESKKLKNAKWLAQG 327

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S     +   I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 328 TIYPDVIESAAS--KTGKAHVIKSHHNVGGLPDDMEMGLVEPLRELFKDEVRKIGLELGL 385

Query: 190 Q 190
            
Sbjct: 386 P 386


>gi|86145604|ref|ZP_01063934.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Vibrio sp. MED222]
 gi|85836575|gb|EAQ54701.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Vibrio sp. MED222]
          Length = 517

 Score = 43.0 bits (99), Expect = 0.035,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 53/181 (29%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS     A     D++  +  D G     E E              +  +
Sbjct: 222 VILGLSGGVDSSVVAMLAHRAIGDKLTCVFVDNGLLRLNEGE--------------QVME 267

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+   L +  +              + +        V              A  L   
Sbjct: 268 MFGDQFGLNIIKVDAEDRFLDALEGEAEPEAKRKIIGHVFVDIFDEESKKLKNAKWLAQG 327

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S     +   I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 328 TIYPDVIESAAS--KTGKAHVIKSHHNVGGLPDDMEMGLVEPLRELFKDEVRKIGLELGL 385

Query: 190 Q 190
            
Sbjct: 386 P 386


>gi|194337627|ref|YP_002019421.1| GMP synthase, large subunit [Pelodictyon phaeoclathratiforme BU-1]
 gi|226739653|sp|B4SFX7|GUAA_PELPB RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|194310104|gb|ACF44804.1| GMP synthase, large subunit [Pelodictyon phaeoclathratiforme BU-1]
          Length = 513

 Score = 43.0 bits (99), Expect = 0.035,   Method: Composition-based stats.
 Identities = 22/185 (11%), Positives = 52/185 (28%), Gaps = 22/185 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             + +   SGG DS+            ++  +  D G   K E        +K++  +  
Sbjct: 220 KETVICGISGGVDSTVAAVMVGKAIGKQLHCVFVDNGLLRKNE-------AEKVMTFLST 272

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +    ++  + L      ++      +                 F+        + 
Sbjct: 273 LGLRVT---LVDASDLFLKRLKTVASPEKKR-----------KIIGRTFIQVFEEQMEQE 318

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                     +   S       +TI++      L     + +  PL  L K E   + ++
Sbjct: 319 KFLVQGTLYPDVIESVSVKGPSETIKSHHNVGGLPKRMKLKLIEPLRELFKDEVRAVGRE 378

Query: 187 IGGQD 191
           +G  +
Sbjct: 379 LGIAE 383


>gi|317132891|ref|YP_004092205.1| NAD+ synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315470870|gb|ADU27474.1| NAD+ synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 644

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 32/100 (32%), Gaps = 7/100 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR------FDRVETLSFDYGQRNKVELECRLCVRKKI 60
           +A +A++  SGG DS+  L  A            +  ++      +         + + I
Sbjct: 343 RAKTAVVAVSGGLDSTLALLVAHRAIENAGLSCAITAITMPGPGTSGRTRGNADALCRSI 402

Query: 61  VELMPKWKDSL-GEDHILPLAILGDISHSSLTKNVAMKIQ 99
              +     S   E H+  +   G    +        ++Q
Sbjct: 403 GATLKVIPISGAVEGHLADIGHDGSPDTAFENAQARERMQ 442


>gi|209528161|ref|ZP_03276633.1| Argininosuccinate synthase [Arthrospira maxima CS-328]
 gi|209491394|gb|EDZ91777.1| Argininosuccinate synthase [Arthrospira maxima CS-328]
          Length = 400

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 59/186 (31%), Gaps = 23/186 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +A  A+L +SGG D+S C+ +  + F    V T++ D GQ              ++  
Sbjct: 1   MGRAEKAVLAYSGGVDTSVCIPYLKNEFGVAEVITVAVDLGQG------------DELGP 48

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +  K  DS   + ++       +   +     A  + +N  P      R +I  V     
Sbjct: 49  VKQKALDSGASESLVIDVQQRFVQEFAFPAIQANALYENRYPLATALARPLIAQVLVEV- 107

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A + G   I  G                     +   L     +        + + ET  
Sbjct: 108 AEKYGADAIAHGCTGKGNDQVRFD--------VSIGALNPNIKILAPAREWGMSREETIA 159

Query: 183 LAQDIG 188
             +  G
Sbjct: 160 YGEKFG 165


>gi|157363281|ref|YP_001470048.1| thiamine biosynthesis protein [Thermotoga lettingae TMO]
 gi|157313885|gb|ABV32984.1| thiamine biosynthesis protein [Thermotoga lettingae TMO]
          Length = 301

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 22/68 (32%), Gaps = 2/68 (2%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  K+   L+  SGG+DSS               L  D G   +   E    + +K  E 
Sbjct: 43  MFNKSEKLLVAVSGGKDSSVAWYVLKKLGYTTSGLFIDLG--TENNTEIVKKISEKTGEE 100

Query: 64  MPKWKDSL 71
           +       
Sbjct: 101 LLIVNGKQ 108


>gi|73976415|ref|XP_532473.2| PREDICTED: similar to asparagine synthetase [Canis familiaris]
          Length = 561

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 34/127 (26%), Gaps = 4/127 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVE---TL-SFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            L SGG DSS   +  L +         L +F  G  +  +L     V   I     +  
Sbjct: 255 CLLSGGLDSSLVAATLLKQLKEAHVQYPLQTFAIGMEDSTDLLAARKVANHIGSEHHEVL 314

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  E   +   ++  +    +T   A                +++      +     G 
Sbjct: 315 FNSEEGIQVLDEVIFSLETYDITTVRASVGMYLVSKYIRKNTDSVVIFSGEGSDELTQGY 374

Query: 129 TNIVIGV 135
                  
Sbjct: 375 IYFHKAP 381


>gi|329944263|ref|ZP_08292522.1| conserved domain protein [Actinomyces sp. oral taxon 170 str.
           F0386]
 gi|328530993|gb|EGF57849.1| conserved domain protein [Actinomyces sp. oral taxon 170 str.
           F0386]
          Length = 571

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 25/68 (36%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +P  +L  SGG DS   ++W          ++F YG+    E+E    V + +       
Sbjct: 195 SPRLVLPLSGGLDSRLLVAWLTLHGTLDRAVAFTYGRPGTREVEVSRKVAEAVGLEWHAV 254

Query: 68  KDSLGEDH 75
                E  
Sbjct: 255 DYVPAELR 262


>gi|307711226|ref|ZP_07647648.1| tRNA(Ile)-lysidine synthetase [Streptococcus mitis SK321]
 gi|307617188|gb|EFN96366.1| tRNA(Ile)-lysidine synthetase [Streptococcus mitis SK321]
          Length = 425

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 59/204 (28%), Gaps = 11/204 (5%)

Query: 6   KKAPSALLLFSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKVELECRL-CVRKKI 60
           KK    +L  SGG DS        ++  +    +     ++ QR + + E +        
Sbjct: 17  KKHAKVVLALSGGLDSMFLFKVLSTYKKELEIELILAHVNHKQRVESDWEEQELRKLAAE 76

Query: 61  VELMPKWKDSLGED-----HILPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            EL     +  GE               ++   +  T  V     D+ +    +      
Sbjct: 77  AELPIYISNFSGEFSEARARNFRYDFFQEVMKKTGATALVTAHHADDQVETILMRLIRGT 136

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
            L + + +  +  +  I I      +             I    N    + +        
Sbjct: 137 RLRYLSGIKEKQVVGEIEIIRPFLHFQKKDFPPIFHFEDISNQENHYFRNRIRNSYLPEL 196

Query: 175 LKKYETWKLAQDIGGQDLVNLILE 198
            K+   ++ A    G ++++  L 
Sbjct: 197 EKENPRFRNAILSIGNEILDYDLA 220


>gi|306821357|ref|ZP_07454965.1| PP-loop superfamily ATP-binding protein [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304550575|gb|EFM38558.1| PP-loop superfamily ATP-binding protein [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 278

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 9   PSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
              L+ FSGG DSS  L  A +      V  ++F+     K ++E    + +     +  
Sbjct: 25  EKVLIAFSGGVDSSLVLKIAREVTEKSNVIAVTFNTILHPKNDIEIVKNLAQDFDVTLQI 84

Query: 67  WKDSLGEDHILPLAILG 83
            + +   +  +    + 
Sbjct: 85  VEINEITNEKILYNDVK 101


>gi|302392812|ref|YP_003828632.1| GMP synthase (glutamine-hydrolyzing) [Acetohalobium arabaticum DSM
           5501]
 gi|302204889|gb|ADL13567.1| GMP synthase (glutamine-hydrolyzing) [Acetohalobium arabaticum DSM
           5501]
          Length = 516

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 55/181 (30%), Gaps = 19/181 (10%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DSS   +   +   D++  +  D+G   K E                + K 
Sbjct: 223 VICGLSGGVDSSVAAALVHEAIGDQLTCIFVDHGLLRKNE--------------AEEVKQ 268

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           + G++  + L  +                ++                         L   
Sbjct: 269 TFGQEFDMNLISVDAQQRFFAKLEGVDDPEEKRKIIGNEFIEVFDEEAGKLGDIEYLVQG 328

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  +        TI++      L  + ++ +  PL  + K E  ++ +++G 
Sbjct: 329 TIYSDVIESGGTDD----SATIKSHHNVGGLPEDMNLKLIEPLRNIFKDEVREVGEELGI 384

Query: 190 Q 190
            
Sbjct: 385 P 385


>gi|289577704|ref|YP_003476331.1| PP-loop domain protein [Thermoanaerobacter italicus Ab9]
 gi|289527417|gb|ADD01769.1| PP-loop domain protein [Thermoanaerobacter italicus Ab9]
          Length = 300

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 21/61 (34%), Gaps = 2/61 (3%)

Query: 2  NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
          N + +K    L + SGG+DS       +     V  +  + G            V +K  
Sbjct: 41 NRMFEKGEKVLAVVSGGKDSMALWDILVKEGYNVVAMYINLGIGEYSN--RSQEVVEKFA 98

Query: 62 E 62
          +
Sbjct: 99 K 99


>gi|256819639|ref|YP_003140918.1| sulfate adenylyltransferase subunit 2 [Capnocytophaga ochracea DSM
           7271]
 gi|315225100|ref|ZP_07866917.1| sulfate adenylyltransferase subunit 2 [Capnocytophaga ochracea
           F0287]
 gi|256581222|gb|ACU92357.1| sulfate adenylyltransferase, small subunit [Capnocytophaga ochracea
           DSM 7271]
 gi|314944783|gb|EFS96815.1| sulfate adenylyltransferase subunit 2 [Capnocytophaga ochracea
           F0287]
          Length = 299

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 52/181 (28%), Gaps = 12/181 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRV----ETLSFDYGQRNKVELECRLCV 56
           M ++  +     LLFSGG+DS T +  A+  F  +      +  D G      LE R  +
Sbjct: 17  MREVAAQFERPALLFSGGKDSITLVHLAMKAFAPMKIPFPLVHIDTGHNFPEALEYRDAL 76

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
            K+I          L    +        ++           +Q + L +T         +
Sbjct: 77  AKRIGA-------ELIVRQVEDTIKAKGLTEPKGKFASRNWLQTHTLLDTIEEFHFDACI 129

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPD-CRHDTIRAIETAINLGMESHVTVHTPLMWL 175
             A     +         V +      P   R +        I  G    V   +    L
Sbjct: 130 GGARRDEEKARAKERFFSVRDEFGQWDPKLQRPELWNIYNGRIQKGENVRVFPISNWTEL 189

Query: 176 K 176
            
Sbjct: 190 D 190


>gi|213963862|ref|ZP_03392110.1| tRNA(Ile)-lysidine synthetase [Capnocytophaga sputigena Capno]
 gi|213953542|gb|EEB64876.1| tRNA(Ile)-lysidine synthetase [Capnocytophaga sputigena Capno]
          Length = 415

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 16/46 (34%), Gaps = 1/46 (2%)

Query: 1  MNDIIK-KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR 45
          MN + + K    L+  SGG DS             +     ++  R
Sbjct: 1  MNTLNQLKNKKILVAISGGIDSVVLTHLLHFHGTELLLAHCNFQLR 46


>gi|206603442|gb|EDZ39922.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase 1
           [Leptospirillum sp. Group II '5-way CG']
          Length = 361

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 22/186 (11%), Positives = 46/186 (24%), Gaps = 17/186 (9%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDY-------GQRN-KVELECRLCVRKKIVELMPK 66
            SGG DS+       +    V     +        GQ   + E          +  +   
Sbjct: 3   LSGGIDSTVSALLLKEAGFDVYGAIVEIWSENSAGGQSGDEREKPWFERACCHLPMVKFL 62

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            ++ L                  +         +   PN        I +      A + 
Sbjct: 63  CEEYL--HIPYVRIDQKQNFQKKIVDVFREGYHNGVTPNPCTDCNAEIKIKTLIDWAEQQ 120

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM-------ESHVTVHTPLMWLKKYE 179
            I+ +  G    ++    +      +A++   +               V  PL    K +
Sbjct: 121 KISYVATGHYARNHYSVRNRLWGIAQALDRKKDQSYFLSRVPEHVLRKVLFPLGHWTKDK 180

Query: 180 TWKLAQ 185
             + A+
Sbjct: 181 VREFAR 186


>gi|168185903|ref|ZP_02620538.1| thiamin biosynthesis protein ThiI [Clostridium botulinum C str.
           Eklund]
 gi|169296022|gb|EDS78155.1| thiamin biosynthesis protein ThiI [Clostridium botulinum C str.
           Eklund]
          Length = 327

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 30/132 (22%), Gaps = 13/132 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL L SGG DS        D+   V  + F          E    + K+I         
Sbjct: 3   KALALISGGLDSILAAKLIKDQGIEVIGICFK---SYFFGPENAKRMTKQID-------- 51

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 ++  +        S        +      +  +       L          G  
Sbjct: 52  --IPLEVVDFSREHFDMTKSPKHGHGKNMNPCIDCHAMMMRYAGELLEKFNADFIITGEV 109

Query: 130 NIVIGVCETDYS 141
                + +   S
Sbjct: 110 LNQRPMSQNKSS 121


>gi|167835143|ref|ZP_02462026.1| argininosuccinate synthase [Burkholderia thailandensis MSMB43]
          Length = 446

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALHWMRIKGAVPYAYTANLGQPDEDDYDAIPKRAIQYGAEGARLID 72


>gi|167717703|ref|ZP_02400939.1| argininosuccinate synthase [Burkholderia pseudomallei DM98]
          Length = 446

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALHWMRIKGAVPYAYTANLGQPDEDDYDAIPKRAIQYGAEGARLID 72


>gi|167561239|ref|ZP_02354155.1| argininosuccinate synthase [Burkholderia oklahomensis EO147]
 gi|167568457|ref|ZP_02361331.1| argininosuccinate synthase [Burkholderia oklahomensis C6786]
          Length = 446

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALHWMRIKGAVPYAYTANLGQPDEDDYDAIPKRAIQYGAEGARLID 72


>gi|85859274|ref|YP_461476.1| argininosuccinate synthase [Syntrophus aciditrophicus SB]
 gi|119361332|sp|Q2LT97|ASSY_SYNAS RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|85722365|gb|ABC77308.1| argininosuccinate synthase [Syntrophus aciditrophicus SB]
          Length = 401

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 9  PSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVR 57
             +L +SGG D+S  + W ++     V   + D GQ+ ++E      ++
Sbjct: 6  KKVVLAYSGGLDTSVIVQWLIETYGCEVIAFAADVGQKEELEGLREKAIK 55


>gi|83719506|ref|YP_440837.1| argininosuccinate synthase [Burkholderia thailandensis E264]
 gi|167579538|ref|ZP_02372412.1| argininosuccinate synthase [Burkholderia thailandensis TXDOH]
 gi|167617625|ref|ZP_02386256.1| argininosuccinate synthase [Burkholderia thailandensis Bt4]
 gi|257140508|ref|ZP_05588770.1| argininosuccinate synthase [Burkholderia thailandensis E264]
 gi|123538195|sp|Q2T1W2|ASSY_BURTA RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|83653331|gb|ABC37394.1| argininosuccinate synthase [Burkholderia thailandensis E264]
          Length = 446

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALHWMRIKGAVPYAYTANLGQPDEDDYDAIPKRAIQYGAEGARLID 72


>gi|53717939|ref|YP_106925.1| argininosuccinate synthase [Burkholderia pseudomallei K96243]
 gi|53724590|ref|YP_104824.1| argininosuccinate synthase [Burkholderia mallei ATCC 23344]
 gi|67640910|ref|ZP_00439701.1| argininosuccinate synthase [Burkholderia mallei GB8 horse 4]
 gi|76811474|ref|YP_331915.1| argininosuccinate synthase [Burkholderia pseudomallei 1710b]
 gi|121599161|ref|YP_994326.1| argininosuccinate synthase [Burkholderia mallei SAVP1]
 gi|124384020|ref|YP_001028025.1| argininosuccinate synthase [Burkholderia mallei NCTC 10229]
 gi|126440345|ref|YP_001057358.1| argininosuccinate synthase [Burkholderia pseudomallei 668]
 gi|126450917|ref|YP_001081753.1| argininosuccinate synthase [Burkholderia mallei NCTC 10247]
 gi|126453241|ref|YP_001064602.1| argininosuccinate synthase [Burkholderia pseudomallei 1106a]
 gi|134283624|ref|ZP_01770323.1| argininosuccinate synthase [Burkholderia pseudomallei 305]
 gi|167001734|ref|ZP_02267526.1| argininosuccinate synthase [Burkholderia mallei PRL-20]
 gi|167736742|ref|ZP_02409516.1| argininosuccinate synthase [Burkholderia pseudomallei 14]
 gi|167813839|ref|ZP_02445519.1| argininosuccinate synthase [Burkholderia pseudomallei 91]
 gi|167822360|ref|ZP_02453831.1| argininosuccinate synthase [Burkholderia pseudomallei 9]
 gi|167843946|ref|ZP_02469454.1| argininosuccinate synthase [Burkholderia pseudomallei B7210]
 gi|167892448|ref|ZP_02479850.1| argininosuccinate synthase [Burkholderia pseudomallei 7894]
 gi|167900948|ref|ZP_02488153.1| argininosuccinate synthase [Burkholderia pseudomallei NCTC 13177]
 gi|167909167|ref|ZP_02496258.1| argininosuccinate synthase [Burkholderia pseudomallei 112]
 gi|167917200|ref|ZP_02504291.1| argininosuccinate synthase [Burkholderia pseudomallei BCC215]
 gi|217425031|ref|ZP_03456527.1| argininosuccinate synthase [Burkholderia pseudomallei 576]
 gi|226199858|ref|ZP_03795409.1| argininosuccinate synthase [Burkholderia pseudomallei Pakistan 9]
 gi|237810500|ref|YP_002894951.1| argininosuccinate synthase [Burkholderia pseudomallei MSHR346]
 gi|242316700|ref|ZP_04815716.1| argininosuccinate synthase [Burkholderia pseudomallei 1106b]
 gi|254177073|ref|ZP_04883730.1| argininosuccinate synthase [Burkholderia mallei ATCC 10399]
 gi|254182108|ref|ZP_04888705.1| argininosuccinate synthase [Burkholderia pseudomallei 1655]
 gi|254188039|ref|ZP_04894551.1| argininosuccinate synthase [Burkholderia pseudomallei Pasteur
          52237]
 gi|254196291|ref|ZP_04902715.1| argininosuccinate synthase [Burkholderia pseudomallei S13]
 gi|254201927|ref|ZP_04908291.1| argininosuccinate synthase [Burkholderia mallei FMH]
 gi|254207263|ref|ZP_04913614.1| argininosuccinate synthase [Burkholderia mallei JHU]
 gi|254260712|ref|ZP_04951766.1| argininosuccinate synthase [Burkholderia pseudomallei 1710a]
 gi|254295845|ref|ZP_04963302.1| argininosuccinate synthase [Burkholderia pseudomallei 406e]
 gi|254359762|ref|ZP_04976033.1| argininosuccinate synthase [Burkholderia mallei 2002721280]
 gi|81684887|sp|Q62EQ4|ASSY_BURMA RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|123600551|sp|Q3JWY8|ASSY_BURP1 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|166219949|sp|A3MNB7|ASSY_BURM7 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|166219950|sp|A2S7V6|ASSY_BURM9 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|166219951|sp|A1V7X3|ASSY_BURMS RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|166219952|sp|A3NQI1|ASSY_BURP0 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|166219953|sp|A3N4T7|ASSY_BURP6 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|52208353|emb|CAH34287.1| argininosuccinate synthase [Burkholderia pseudomallei K96243]
 gi|52428013|gb|AAU48606.1| argininosuccinate synthase [Burkholderia mallei ATCC 23344]
 gi|76580927|gb|ABA50402.1| argininosuccinate synthase [Burkholderia pseudomallei 1710b]
 gi|121227971|gb|ABM50489.1| argininosuccinate synthase [Burkholderia mallei SAVP1]
 gi|124292040|gb|ABN01309.1| argininosuccinate synthase [Burkholderia mallei NCTC 10229]
 gi|126219838|gb|ABN83344.1| argininosuccinate synthase [Burkholderia pseudomallei 668]
 gi|126226883|gb|ABN90423.1| argininosuccinate synthase [Burkholderia pseudomallei 1106a]
 gi|126243787|gb|ABO06880.1| argininosuccinate synthase [Burkholderia mallei NCTC 10247]
 gi|134245033|gb|EBA45128.1| argininosuccinate synthase [Burkholderia pseudomallei 305]
 gi|147747821|gb|EDK54897.1| argininosuccinate synthase [Burkholderia mallei FMH]
 gi|147752805|gb|EDK59871.1| argininosuccinate synthase [Burkholderia mallei JHU]
 gi|148028976|gb|EDK86908.1| argininosuccinate synthase [Burkholderia mallei 2002721280]
 gi|157806049|gb|EDO83219.1| argininosuccinate synthase [Burkholderia pseudomallei 406e]
 gi|157935719|gb|EDO91389.1| argininosuccinate synthase [Burkholderia pseudomallei Pasteur
          52237]
 gi|160698114|gb|EDP88084.1| argininosuccinate synthase [Burkholderia mallei ATCC 10399]
 gi|169653034|gb|EDS85727.1| argininosuccinate synthase [Burkholderia pseudomallei S13]
 gi|184212646|gb|EDU09689.1| argininosuccinate synthase [Burkholderia pseudomallei 1655]
 gi|217392051|gb|EEC32077.1| argininosuccinate synthase [Burkholderia pseudomallei 576]
 gi|225928209|gb|EEH24245.1| argininosuccinate synthase [Burkholderia pseudomallei Pakistan 9]
 gi|237504393|gb|ACQ96711.1| argininosuccinate synthase [Burkholderia pseudomallei MSHR346]
 gi|238521722|gb|EEP85171.1| argininosuccinate synthase [Burkholderia mallei GB8 horse 4]
 gi|242139939|gb|EES26341.1| argininosuccinate synthase [Burkholderia pseudomallei 1106b]
 gi|243062521|gb|EES44707.1| argininosuccinate synthase [Burkholderia mallei PRL-20]
 gi|254219401|gb|EET08785.1| argininosuccinate synthase [Burkholderia pseudomallei 1710a]
          Length = 446

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ + +       +      +  D
Sbjct: 16 IAFSGGLDTSAALHWMRIKGAVPYAYTANLGQPDEDDYDAIPKRAIQYGAEGARLID 72


>gi|327332315|gb|EGE74051.1| GMP synthase [Propionibacterium acnes HL097PA1]
          Length = 517

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 22/183 (12%), Positives = 52/183 (28%), Gaps = 16/183 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +       D++  +  D+G   + E            ++   + 
Sbjct: 219 RVICGLSGGVDSAVAAALVQRAVGDQLTCVFVDHGLLRQGE----------AGQVKNDFV 268

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            + G D ++       +   +   +   K +                L      A +   
Sbjct: 269 AATGADLVVADESQRFLDALAGVTDPETKRKIIGREFIRTFEDVAKRLN-----ADQPID 323

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +   ++  PL  L K E   +  ++G
Sbjct: 324 FLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPDDLQFSLVEPLRTLFKDEVRAVGLELG 383

Query: 189 GQD 191
             +
Sbjct: 384 LPE 386


>gi|307720527|ref|YP_003891667.1| hypothetical protein Saut_0606 [Sulfurimonas autotrophica DSM
           16294]
 gi|306978620|gb|ADN08655.1| hypothetical protein Saut_0606 [Sulfurimonas autotrophica DSM
           16294]
          Length = 453

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 61/221 (27%), Gaps = 26/221 (11%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +K   + ++   GG+DS        D F      S +        +     + KK  E  
Sbjct: 146 LKTQENIIIPIGGGKDSLVSYELLKDEFPDAFMFSMN-------PIVASEDILKKHPEHA 198

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            + K  L    IL     G ++      ++   I   ++    +     I L   ++   
Sbjct: 199 IELKRELDLKKILDFNERGYLNGHIPFSSIVGFI---SIWLGLLYKTKYIVLSNESSANE 255

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
              I            +       +        I+  +   V   + L  L +    +L 
Sbjct: 256 ENIIY------NGQRINHQYSKSIEFENDFREYISSFITDDVEYFSFLRPLDEIHIAQLF 309

Query: 185 QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACY 225
                +           +C +G +   +     C  CP C 
Sbjct: 310 ATFAKEYFFTF-----RSCNVGSKRNEW-----CGKCPKCL 340


>gi|288958012|ref|YP_003448353.1| GMP synthase (glutamine-hydrolyzing) [Azospirillum sp. B510]
 gi|288910320|dbj|BAI71809.1| GMP synthase (glutamine-hydrolyzing) [Azospirillum sp. B510]
          Length = 522

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 53/184 (28%), Gaps = 17/184 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS       +   D++  +  D G     E E       ++V L   
Sbjct: 224 KGKVICGLSGGVDSSVAAVLIHEAIGDQLTCIFVDTGLMRAGESE-------EVVRLFRD 276

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +            LG ++  +  +     I         +              A  L
Sbjct: 277 HYNIPLVHREAADLFLGKLAGVTDPEQKRKIIGG-------LFIEVFDEESAKVGGAEFL 329

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+    +      TI++      L     + +  PL  L K E   L ++
Sbjct: 330 AQGTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMKLKLVEPLRELFKDEVRALGRE 387

Query: 187 IGGQ 190
           +G  
Sbjct: 388 LGLP 391


>gi|260596609|ref|YP_003209180.1| tRNA(Ile)-lysidine synthase [Cronobacter turicensis z3032]
 gi|260215786|emb|CBA28217.1| tRNA(Ile)-lysidine synthase [Cronobacter turicensis z3032]
          Length = 444

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 18/51 (35%), Gaps = 5/51 (9%)

Query: 12 LLLFSGGQDSSTCLSWA--LDRFD---RVETLSFDYGQRNKVELECRLCVR 57
          L+ +SGG DS+  L     L       R+  +   +G     +     C  
Sbjct: 26 LVAYSGGLDSTVLLHQLVRLRETHPELRLRAIHVHHGISPNADRWAAHCQA 76


>gi|255321438|ref|ZP_05362598.1| NAD+ synthetase [Campylobacter showae RM3277]
 gi|255301591|gb|EET80848.1| NAD+ synthetase [Campylobacter showae RM3277]
          Length = 251

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 23/176 (13%), Positives = 44/176 (25%), Gaps = 11/176 (6%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +L  SGG DS+   +           L       N+  L   L + K +       +   
Sbjct: 28  VLGVSGGLDSAVVAALCARTGIETHALLMPTKYSNERNLSDALKLCKDLKITHKIIEIQP 87

Query: 72  GEDHI----------LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
             D            L +  L   +   L  + + K+    +  +    R + +      
Sbjct: 88  ILDSFTAQIGEQPSNLRMGNLSARARMCLLYDYSAKVNALVVGTSNKSERLLGYGTIYGD 147

Query: 122 LAYRLG-ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
           +A  L  I  +                    +A    +  G      +      L 
Sbjct: 148 MACALNPIGELFKTEIYELARELGIDEKIIAKAPSADLWEGQSDEADIGYTYQRLD 203


>gi|225016574|ref|ZP_03705766.1| hypothetical protein CLOSTMETH_00481 [Clostridium methylpentosum
           DSM 5476]
 gi|224950683|gb|EEG31892.1| hypothetical protein CLOSTMETH_00481 [Clostridium methylpentosum
           DSM 5476]
          Length = 405

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 49/159 (30%), Gaps = 10/159 (6%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +    +L +SGG D+S  + W  + +    V  ++ D GQ  ++       ++    +
Sbjct: 1   MAEIKKVILAYSGGLDTSIIIPWLKENYNNCEVVAVAADVGQGAELSGLEEKAIKTGASK 60

Query: 63  LM-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           L          ED+I P    G +  +         +   +     +  R +        
Sbjct: 61  LYIEDLTKEFVEDYIFPTVKAGAVYEN-------KYLLGTSFARPLIGKRLVEIAKKENA 113

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
            A   G T         + +      +  I A      L
Sbjct: 114 DAIVHGCTGKGNDQVRFELAIKAFAPNMKIIAPWRTWEL 152


>gi|184159138|ref|YP_001847477.1| ATPase [Acinetobacter baumannii ACICU]
 gi|332875967|ref|ZP_08443753.1| MJ0570 uncharacterized domain protein [Acinetobacter baumannii
           6014059]
 gi|183210732|gb|ACC58130.1| predicted ATPase of PP-loop superfamily [Acinetobacter baumannii
           ACICU]
 gi|322509052|gb|ADX04506.1| ATPase [Acinetobacter baumannii 1656-2]
 gi|323519034|gb|ADX93415.1| ATPase [Acinetobacter baumannii TCDC-AB0715]
 gi|332735833|gb|EGJ66874.1| MJ0570 uncharacterized domain protein [Acinetobacter baumannii
           6014059]
          Length = 228

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 43/120 (35%), Gaps = 7/120 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSF--DYGQR---NKVELECRLCVRKKIV- 61
              +++ FSGG+DSS  L  A+   + +  +    + GQR   + + L+      + I  
Sbjct: 11  NRQSIVSFSGGKDSSLALYHAMQTGNVIGLIVMLEEQGQRSRSHAMPLDIIRAQAQAIGL 70

Query: 62  -ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
              M     +  E+  + L        + +     + + ++   +  V     + L    
Sbjct: 71  PVFMASSSWNDYENKFINLLNEAKQKGAEVLVTGDLDMPEHGCWHDRVTQTVGLKLGMPL 130


>gi|169795074|ref|YP_001712867.1| hypothetical protein ABAYE0919 [Acinetobacter baumannii AYE]
 gi|213158264|ref|YP_002320315.1| hypothetical protein AB57_2984 [Acinetobacter baumannii AB0057]
 gi|215482624|ref|YP_002324816.1| MJ0570-related uncharacterized domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|301346463|ref|ZP_07227204.1| MJ0570-related uncharacterized domain protein [Acinetobacter
           baumannii AB056]
 gi|301512449|ref|ZP_07237686.1| MJ0570-related uncharacterized domain protein [Acinetobacter
           baumannii AB058]
 gi|301594742|ref|ZP_07239750.1| MJ0570-related uncharacterized domain protein [Acinetobacter
           baumannii AB059]
 gi|332851077|ref|ZP_08433186.1| uncharacterized domain protein [Acinetobacter baumannii 6013150]
 gi|332869674|ref|ZP_08438862.1| uncharacterized domain protein [Acinetobacter baumannii 6013113]
 gi|169148001|emb|CAM85864.1| conserved hypothetical protein [Acinetobacter baumannii AYE]
 gi|213057424|gb|ACJ42326.1| conserved hypothetical protein [Acinetobacter baumannii AB0057]
 gi|213986085|gb|ACJ56384.1| MJ0570-related uncharacterized domain protein [Acinetobacter
           baumannii AB307-0294]
 gi|332730241|gb|EGJ61566.1| uncharacterized domain protein [Acinetobacter baumannii 6013150]
 gi|332732576|gb|EGJ63809.1| uncharacterized domain protein [Acinetobacter baumannii 6013113]
          Length = 228

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 43/120 (35%), Gaps = 7/120 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSF--DYGQR---NKVELECRLCVRKKIV- 61
              +++ FSGG+DSS  L  A+   + +  +    + GQR   + + L+      + I  
Sbjct: 11  NRQSIVSFSGGKDSSLALYHAMQTGNVIGLIVMLEEQGQRSRSHAMPLDIIRAQAQAIGL 70

Query: 62  -ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
              M     +  E+  + L        + +     + + ++   +  V     + L    
Sbjct: 71  PVFMASSSWNDYENKFINLLNEAKQKGAEVLVTGDLDMPEHGCWHDRVTQTVGLKLGMPL 130


>gi|163790890|ref|ZP_02185314.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Carnobacterium sp. AT7]
 gi|159873843|gb|EDP67923.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Carnobacterium sp. AT7]
          Length = 516

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 56/186 (30%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G                   L+ K 
Sbjct: 222 KKVLLGLSGGVDSSVVGVLLQKAIGDQLTCIFVDHG-------------------LLRKG 262

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +     + ++    L  I   +  + +A     ++         N    VF        G
Sbjct: 263 ESEQVMESLVGKFGLNIIRVDAKERFMAKLAGVSDPETKRKIIGNEFVYVFDDEATKLDG 322

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L       +  PL  L K E  +L   +
Sbjct: 323 VNFLAQGTLYTDVIESGTDTAQTIKSHHNVGGLPENMQFKLIEPLNTLFKDEVRELGIQL 382

Query: 188 GGQDLV 193
           G  + +
Sbjct: 383 GMPESL 388


>gi|159899995|ref|YP_001546242.1| GMP synthase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159893034|gb|ABX06114.1| GMP synthase, large subunit [Herpetosiphon aurantiacus ATCC 23779]
          Length = 514

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 24/182 (13%), Positives = 43/182 (23%), Gaps = 17/182 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDR-VETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+     A       +  +  D G   + E                +   
Sbjct: 219 VICALSGGVDSAVAALLAHQAIVERLTCIFVDNGLLRRGE--------------AEQVSR 264

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +  +   + L  +                +           R           A  L   
Sbjct: 265 TFRDHFQIELITVDAAEEFLAALAGVTDPEQKRKIIGEKFIRIFEREARNLDDAAYLVQG 324

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   V E+  +         I+       L  +  + V  PL  L K E       +G 
Sbjct: 325 TLYPDVIES--TAPDRNVAVKIKTHHNVGGLPDDMKLKVIEPLRMLFKDEVRAAGLALGL 382

Query: 190 QD 191
            +
Sbjct: 383 PE 384


>gi|146300132|ref|YP_001194723.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Flavobacterium johnsoniae UW101]
 gi|226738456|sp|A5FHB4|GUAA_FLAJ1 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|146154550|gb|ABQ05404.1| GMP synthase, large subunit [Flavobacterium johnsoniae UW101]
          Length = 509

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 46/187 (24%), Gaps = 19/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DS+             +  +  + G   K E +  L   K +      
Sbjct: 213 NDKVVLGLSGGVDSTVAAVLLNKAIGQNLYCIFVNNGLLRKNEFQNVLDQYKGMG----- 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                          +  +            I D       +    I      + L   +
Sbjct: 268 -------------LNVKGVDAGDRFLGELAGISDPETKRKTIGRVFIEVFDDESHLLEDV 314

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                     +   S        TI++      L     + +  PL  L K E  ++   
Sbjct: 315 KWLAQGTIYPDVIESVSVKGPSATIKSHHNVGGLPDYMKLKIVEPLRMLFKDEVRRVGAT 374

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 375 LGIDPEL 381


>gi|25147560|ref|NP_741865.1| hypothetical protein M02D8.4 [Caenorhabditis elegans]
 gi|25112585|gb|AAN72427.1| Asparagine synthetase protein 2, isoform b, confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 465

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 23/75 (30%), Gaps = 6/75 (8%)

Query: 13  LLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           +L SGG DSS   S A      R   V   SF  G  +            K +       
Sbjct: 234 VLLSGGLDSSLVSSIASREMKRRGMAVH--SFSIGVDHNSPDVVAARKVAKFIGTTHHEF 291

Query: 69  DSLGEDHILPLAILG 83
               E     +++ G
Sbjct: 292 YFSIEVSRTCVSLFG 306


>gi|6691648|dbj|BAA89376.1| unnamed protein product [Moritella marina]
          Length = 555

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 22/187 (11%), Positives = 48/187 (25%), Gaps = 14/187 (7%)

Query: 13  LLFSGGQDSSTCLSW----ALDR---FDRVET----LS-FDYGQRNKVELECRLCVRKKI 60
           +L SGG DSS   +     A  R     + E     L  F  G     +L     V   +
Sbjct: 232 VLLSGGLDSSVISAITQQYAKRRIEDGGKTEAWWPQLHSFSVGLNGSPDLAAAQKVADHL 291

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +     +   ++ I  L  +     +     +        +          + L    
Sbjct: 292 GTIHHSI-EFTVQEGIDALRDVIYHIETYDVTTIRASTPMYLMARKIKAMGIKMVLSGEG 350

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
                 G           ++      + + +   +        +   +   + +L K E 
Sbjct: 351 ADELFGGYLYFHKAPNAKEFHEETVRKVNKLHMFDCLRANKSMAAWGIEARVPFLDK-EF 409

Query: 181 WKLAQDI 187
              +  +
Sbjct: 410 VDASMRL 416


>gi|325689720|gb|EGD31724.1| GMP synthase [Streptococcus sanguinis SK115]
          Length = 520

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 50/188 (26%), Gaps = 24/188 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM--P 65
              LL  SGG DSS           D++  +  D+G   K E      V   +       
Sbjct: 226 KKVLLGLSGGVDSSVVGVLLQKAIGDQLICIFVDHGLLRKGE---ADQVMDMLGGKFGLN 282

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             K    +  +  LA + D                ++  +     + +        +   
Sbjct: 283 IIKAYAAKRFLDKLAGVSDPEQKRKIIGNEFVYVFDDEASKLKDVKFLAQGTLYTDVIES 342

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                                   TI++      L  +    +  PL  L K E   L  
Sbjct: 343 ------------------GTDTAQTIKSHHNVGGLPEDMQFELIEPLNTLYKDEVRALGT 384

Query: 186 DIGGQDLV 193
           ++G  D +
Sbjct: 385 ELGMPDEI 392


>gi|323704377|ref|ZP_08115956.1| Queuosine synthesis-like protein [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323536443|gb|EGB26215.1| Queuosine synthesis-like protein [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 275

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 54/198 (27%), Gaps = 41/198 (20%)

Query: 5   IKKAPSALLLFSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           I+K  SA++ FSGG DS+     C     DR   V   S  Y QR   E +    + K+I
Sbjct: 14  IEKLGSAVIAFSGGVDSTFLAKVCYDVLKDRCVAVTATSSTYPQR---EFKEAQELAKQI 70

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                          I+    L     S    +     +                     
Sbjct: 71  G----------IRHRIIRSEELEIEGFSKNPIDRCYYCKSE-------------LFSKLK 107

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            +A   GI  ++ G    D   +   R               E  V          K + 
Sbjct: 108 NVAEEEGIEYVLDGTNYDDTGDFRPGRR-----------AARELGVKSPLLECGFTKNDI 156

Query: 181 WKLAQDIGGQDLVNLILE 198
            ++++ +G          
Sbjct: 157 REMSKILGLPTWNKPAYA 174


>gi|319939115|ref|ZP_08013479.1| GMP synthase [Streptococcus anginosus 1_2_62CV]
 gi|319812165|gb|EFW08431.1| GMP synthase [Streptococcus anginosus 1_2_62CV]
          Length = 519

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 50/188 (26%), Gaps = 24/188 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM--P 65
              LL  SGG DSS           D++  +  D+G   K E      V   +       
Sbjct: 225 KRVLLGLSGGVDSSVVGVLLQKAIGDQLICIFVDHGLLRKGE---ADQVMDSLGGKFGLN 281

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             K    +  +  LA + D                ++  +     R +        +   
Sbjct: 282 IIKADAAKRFLDKLAGVSDPEQKRKIIGNEFVYVFDDEASKLKDVRFLAQGTLYTDVIES 341

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                                   TI++      L  +    +  PL  L K E   L  
Sbjct: 342 ------------------GTDTAQTIKSHHNVGGLPEDMQFKLIEPLNTLYKDEVRALGT 383

Query: 186 DIGGQDLV 193
           ++G  D +
Sbjct: 384 ELGMPDEI 391


>gi|312792431|ref|YP_004025354.1| PP-loop domain-containing protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179571|gb|ADQ39741.1| PP-loop domain protein [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 303

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 20/59 (33%), Gaps = 2/59 (3%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD--YGQRNKVELECRLCVRKK 59
            +  K    L++ SGG+DS             V  +  +   GQ +    +      +K
Sbjct: 42  RMFDKEDKVLVVISGGKDSMALWHILASEGYNVTGMYINLGIGQYSDKSQQVVESFAQK 100


>gi|227825141|ref|ZP_03989973.1| argininosuccinate synthase [Acidaminococcus sp. D21]
 gi|226905640|gb|EEH91558.1| argininosuccinate synthase [Acidaminococcus sp. D21]
          Length = 407

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 5/45 (11%)

Query: 5  IKKA---PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQ 44
          +KK       +L +SGG D+S  + W  + +    V T++ D GQ
Sbjct: 1  MKKKDEIKKVVLAYSGGLDTSVIIPWLKENYNNCEVITVTADLGQ 45


>gi|224368901|ref|YP_002603063.1| ATP-utilizing protein of the PP-loop superfamily [Desulfobacterium
           autotrophicum HRM2]
 gi|223691618|gb|ACN14901.1| ATP-utilizing protein of the PP-loop superfamily [Desulfobacterium
           autotrophicum HRM2]
          Length = 276

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 60/187 (32%), Gaps = 5/187 (2%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           +K      + FSGG DS+   + A D       ++     ++  E    +C+ + I    
Sbjct: 12  LKAYGKIAIAFSGGVDSAFLAAVAKDTCGSSVAITVKSAFQSGQEAYNAVCMAEAIGIRH 71

Query: 65  PKW-KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA---A 120
                D LG   I+            +  ++     D     T V G N+  L       
Sbjct: 72  VVVQADVLGNSRIVKNTSERCYFCKKMIFSLLTDRADELGLKTIVHGANVDDLADYRPGL 131

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
             A  +G+   ++    T        R   ++         + + +  +   + L+K E 
Sbjct: 132 RAAREMGVIAPLLDAGLTKNEIRDLSRRAGLKTWNMDAQSCLATRIP-YGDTITLEKLEM 190

Query: 181 WKLAQDI 187
            +  + +
Sbjct: 191 VENGERV 197


>gi|193075062|gb|ACF08533.1| GuaA [Pseudomonas aeruginosa]
          Length = 281

 Score = 43.0 bits (99), Expect = 0.036,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 55/184 (29%), Gaps = 17/184 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   LL  SGG DSS   +       D++  +  D G     E +       +++ +  +
Sbjct: 79  SSKVLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRLHEGD-------QVMAMFAE 131

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     +    LG ++  +         ++                         L
Sbjct: 132 NMGVKVIRANVEDKFLGRLAGVADP-------EEKRKIIGRTFIEVFDEEATKLQDVKFL 184

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+  +G    +   I++      L  +    +  PL  L K E  K+  +
Sbjct: 185 AQGTIYPDVIES--AGAKTGKAHVIKSHHNVGGLPEDMQFELVEPLRELFKDEVRKIGLE 242

Query: 187 IGGQ 190
           +G  
Sbjct: 243 LGLP 246


>gi|322382666|ref|ZP_08056530.1| GMP synthase-like protein [Paenibacillus larvae subsp. larvae
           B-3650]
 gi|321153364|gb|EFX45787.1| GMP synthase-like protein [Paenibacillus larvae subsp. larvae
           B-3650]
          Length = 512

 Score = 43.0 bits (99), Expect = 0.037,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 51/182 (28%), Gaps = 20/182 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS           D++  +  D+G                   L+ K +
Sbjct: 219 KVLCALSGGVDSSVVAVLIHKAIGDQLTCMFIDHG-------------------LLRKDE 259

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                +  +    +  I   +  + +       +         N    VF    A+    
Sbjct: 260 AEGVMETFVGKFDMKVIKIDARDRFLGKLAGVEDPEQKRKIIGNEFIYVFEEESAHIGEF 319

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G   TD          TI++      L       +  PL  L K E  K+ ++ G
Sbjct: 320 DFLAQGTLYTDIVESGTDTAQTIKSHHNVGGLPEGMRFELIEPLKALFKDEVRKVGEECG 379

Query: 189 GQ 190
             
Sbjct: 380 LP 381


>gi|167464930|ref|ZP_02330019.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Paenibacillus larvae subsp. larvae BRL-230010]
          Length = 494

 Score = 43.0 bits (99), Expect = 0.037,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 51/182 (28%), Gaps = 20/182 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS           D++  +  D+G                   L+ K +
Sbjct: 201 KVLCALSGGVDSSVVAVLIHKAIGDQLTCMFIDHG-------------------LLRKDE 241

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                +  +    +  I   +  + +       +         N    VF    A+    
Sbjct: 242 AEGVMETFVGKFDMKVIKIDARDRFLGKLAGVEDPEQKRKIIGNEFIYVFEEESAHIGEF 301

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G   TD          TI++      L       +  PL  L K E  K+ ++ G
Sbjct: 302 DFLAQGTLYTDIVESGTDTAQTIKSHHNVGGLPEGMRFELIEPLKALFKDEVRKVGEECG 361

Query: 189 GQ 190
             
Sbjct: 362 LP 363


>gi|41409587|ref|NP_962423.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|254776776|ref|ZP_05218292.1| GMP synthase [Mycobacterium avium subsp. avium ATCC 25291]
 gi|50400366|sp|Q73U79|GUAA_MYCPA RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|41398418|gb|AAS06039.1| GuaA [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 525

 Score = 43.0 bits (99), Expect = 0.037,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 52/184 (28%), Gaps = 16/184 (8%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A+   SGG DS+   +       DR+  +  D+G      L       +   + +     
Sbjct: 228 AICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHG------LLRAGERAQVQRDFVAATGA 281

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +L     +  A     + + +T     +            G     L          G  
Sbjct: 282 NLV---TVDAADTFLQALAGVTNPEGKRKIIGRQFIRAFEGAVRDVLGDKPVEFLVQGTL 338

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
              +                 I++      L  +   T+  PL  L K E   + +++G 
Sbjct: 339 YPDVVESGGGSGTA------NIKSHHNVGGLPGDLKFTLVEPLRLLFKDEVRAVGRELGL 392

Query: 190 QDLV 193
            + +
Sbjct: 393 PEEI 396


>gi|83945246|ref|ZP_00957595.1| GMP synthase [Oceanicaulis alexandrii HTCC2633]
 gi|83851416|gb|EAP89272.1| GMP synthase [Oceanicaulis alexandrii HTCC2633]
          Length = 522

 Score = 43.0 bits (99), Expect = 0.037,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 54/185 (29%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DSS       +   D++  +  D G     E         ++V L   
Sbjct: 224 SGRVICGLSGGVDSSVAAVLIHEAIGDQLTCVFVDTGLMRSGE-------ADQVVTLFR- 275

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 E + +PL    +              +        +              A  L
Sbjct: 276 ------EHYNIPLVAADEEERFLSALAGESDPEKKRKTIGKLFIDVFEDKAKGVGGADFL 329

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+    +      TI++      L    ++ +  PL  L K E   L ++
Sbjct: 330 AQGTLYPDVIESV--SFDGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRALGRE 387

Query: 187 IGGQD 191
           +G  +
Sbjct: 388 LGLPE 392


>gi|325294859|ref|YP_004281373.1| NH(3)-dependent NAD(+) synthetase [Desulfurobacterium
          thermolithotrophum DSM 11699]
 gi|325065307|gb|ADY73314.1| NH(3)-dependent NAD(+) synthetase [Desulfurobacterium
          thermolithotrophum DSM 11699]
          Length = 279

 Score = 43.0 bits (99), Expect = 0.037,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 20/62 (32%), Gaps = 2/62 (3%)

Query: 9  PSALLLFSGGQDSSTCLSW-ALDRFDR-VETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            A++  SGG DS+       +      +  +S  Y   +   +E    V   +     +
Sbjct: 35 KKAVVGISGGVDSALSAFLGVMALGKENIIGISMPYRTSSNSSIEDARLVANTLGIEFHE 94

Query: 67 WK 68
            
Sbjct: 95 ID 96


>gi|270159842|ref|ZP_06188498.1| tRNA(Ile)-lysidine synthase [Legionella longbeachae D-4968]
 gi|289165400|ref|YP_003455538.1| cell cycle protein MesJ [Legionella longbeachae NSW150]
 gi|269988181|gb|EEZ94436.1| tRNA(Ile)-lysidine synthase [Legionella longbeachae D-4968]
 gi|288858573|emb|CBJ12454.1| cell cycle protein MesJ [Legionella longbeachae NSW150]
          Length = 460

 Score = 43.0 bits (99), Expect = 0.037,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 22/59 (37%), Gaps = 5/59 (8%)

Query: 12 LLLFSGGQDSSTCLSWALDR---FDRVETLSFDYGQRNKVELECRLC--VRKKIVELMP 65
          ++ FSGG DS+  L          D++  +  ++G     +     C    +K+     
Sbjct: 21 IVGFSGGLDSTVLLHALAAHPILLDKIVAVHVNHGINANADFWQEHCKQFCQKLGVSFR 79


>gi|228919014|ref|ZP_04082394.1| tRNA(Ile)-lysidine synthase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228840663|gb|EEM85924.1| tRNA(Ile)-lysidine synthase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 480

 Score = 43.0 bits (99), Expect = 0.037,   Method: Composition-based stats.
 Identities = 23/197 (11%), Positives = 52/197 (26%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D++K   + ++  SGG DS   L + L++                          K +V 
Sbjct: 21  DVLKNDSTIVVGVSGGPDSLALLYYLLEK--------------------RAEKQLKIVVA 60

Query: 63  LMPKW--KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +      D   ED      +  ++     T  + +                     F  
Sbjct: 61  HVDHMFRGDESYEDLQFVQGLCEELGIICETIRINVSQYQQQYGMNAQVAARECRYAFLE 120

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKK 177
            +  +     + +G    D       R       +    + ++       +  PL+ + K
Sbjct: 121 RIMKKYDARYVALGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGYLIRPLLGVTK 180

Query: 178 YETWKLAQDIGGQDLVN 194
            E       +     ++
Sbjct: 181 EEIVDYCNKLNLMPRID 197


>gi|194445647|ref|YP_002041769.1| GMP synthase [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
 gi|226739720|sp|B4T0N7|GUAA_SALNS RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|194404310|gb|ACF64532.1| gmp synthase (glutamine-hydrolyzing) [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
          Length = 525

 Score = 43.0 bits (99), Expect = 0.037,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVMDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IVHVPAEERFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|56412608|ref|YP_149683.1| GMP synthase [Salmonella enterica subsp. enterica serovar Paratyphi
           A str. ATCC 9150]
 gi|62181078|ref|YP_217495.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161612736|ref|YP_001586701.1| GMP synthase [Salmonella enterica subsp. enterica serovar Paratyphi
           B str. SPB7]
 gi|167991815|ref|ZP_02572914.1| gmp synthase (glutamine-hydrolyzing) [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168466744|ref|ZP_02700598.1| gmp synthase (glutamine-hydrolyzing) [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197265595|ref|ZP_03165669.1| gmp synthase (glutamine-hydrolyzing) [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197361543|ref|YP_002141179.1| GMP synthase [Salmonella enterica subsp. enterica serovar Paratyphi
           A str. AKU_12601]
 gi|204929457|ref|ZP_03220531.1| gmp synthase (glutamine-hydrolyzing) [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|224582954|ref|YP_002636752.1| GMP synthase [Salmonella enterica subsp. enterica serovar Paratyphi
           C strain RKS4594]
 gi|75481714|sp|Q57LJ8|GUAA_SALCH RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|81360644|sp|Q5PI52|GUAA_SALPA RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226739721|sp|A9N218|GUAA_SALPB RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226739722|sp|B5BAZ5|GUAA_SALPK RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|254800113|sp|C0PYP4|GUAA_SALPC RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|56126865|gb|AAV76371.1| GMP synthase (glutamine-hydrolyzing) [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62128711|gb|AAX66414.1| GMP synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161362100|gb|ABX65868.1| hypothetical protein SPAB_00435 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|195630797|gb|EDX49389.1| gmp synthase (glutamine-hydrolyzing) [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197093019|emb|CAR58455.1| GMP synthase (glutamine-hydrolyzing) [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|197243850|gb|EDY26470.1| gmp synthase (glutamine-hydrolyzing) [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|204321176|gb|EDZ06376.1| gmp synthase (glutamine-hydrolyzing) [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205329878|gb|EDZ16642.1| gmp synthase (glutamine-hydrolyzing) [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|224467481|gb|ACN45311.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Salmonella enterica subsp. enterica serovar Paratyphi C
           strain RKS4594]
 gi|261247707|emb|CBG25534.1| GMP synthase (glutamine-hydrolyzing) [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267994622|gb|ACY89507.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. 14028S]
 gi|301159060|emb|CBW18573.1| GMP synthase [glutamine-hydrolyzing] [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312913496|dbj|BAJ37470.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. T000240]
 gi|321222790|gb|EFX47861.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. TN061786]
 gi|322715563|gb|EFZ07134.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
 gi|323130838|gb|ADX18268.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
 gi|332989438|gb|AEF08421.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 525

 Score = 43.0 bits (99), Expect = 0.037,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVMDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IVHVPAEERFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|73748640|ref|YP_307879.1| GMP synthase [Dehalococcoides sp. CBDB1]
 gi|91206805|sp|Q3ZXH7|GUAA_DEHSC RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|73660356|emb|CAI82963.1| GMP synthase [Dehalococcoides sp. CBDB1]
          Length = 533

 Score = 43.0 bits (99), Expect = 0.037,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 58/185 (31%), Gaps = 17/185 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+   S       D++  +  + G   + E +  L V K  + +   + D
Sbjct: 238 VICALSGGVDSAVVASLIHKAIGDQLTCIYVNNGLLRREEADRTLHVFKNHMGMKIIYVD 297

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++       L  LG I+     + V          +       I FL             
Sbjct: 298 AIDRF----LESLGGITDPEQKRKVIGSEFIKVFEDEACKLGQIDFLAQGT--------- 344

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
              +     +           I++      L     + +  PL +L K E   L +++G 
Sbjct: 345 ---LYPDVIESVSSVSKASAKIKSHHNVGGLPAHMKLKLIEPLRYLFKDEVRLLGKELGL 401

Query: 190 QDLVN 194
            D + 
Sbjct: 402 PDEMI 406


>gi|16765830|ref|NP_461445.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|24211758|sp|Q8ZN60|GUAA_SALTY RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|16421053|gb|AAL21404.1| GMP synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
          Length = 525

 Score = 43.0 bits (99), Expect = 0.037,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVMDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IVHVPAEERFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|332526192|ref|ZP_08402327.1| argininosuccinate synthase [Rubrivivax benzoatilyticus JA2]
 gi|332110032|gb|EGJ10660.1| argininosuccinate synthase [Rubrivivax benzoatilyticus JA2]
          Length = 447

 Score = 43.0 bits (99), Expect = 0.037,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  + W   +       + + GQ ++ + +       +      +  D
Sbjct: 17 IAFSGGLDTSAAVHWMRAKGAIPCAYTANLGQPDESDYDAIPKKALEYGAEKARLVD 73


>gi|330443788|ref|YP_004376774.1| tRNA(Ile)-lysidine synthetase [Chlamydophila pecorum E58]
 gi|328806898|gb|AEB41071.1| tRNA(Ile)-lysidine synthetase [Chlamydophila pecorum E58]
          Length = 318

 Score = 43.0 bits (99), Expect = 0.037,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 25/72 (34%), Gaps = 5/72 (6%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          + +  S LL FSGG DS                +  D+G R     EC     K + E  
Sbjct: 20 LDRKKSYLLGFSGGSDSLFLFYVLKSLKINFTAVHVDHGWR-----ECSREEAKALKEFC 74

Query: 65 PKWKDSLGEDHI 76
           + K S     +
Sbjct: 75 HREKISYIGHRL 86


>gi|295702455|ref|YP_003595530.1| GMP synthase [Bacillus megaterium DSM 319]
 gi|294800114|gb|ADF37180.1| GMP synthase (glutamine-hydrolyzing) [Bacillus megaterium DSM 319]
          Length = 509

 Score = 43.0 bits (99), Expect = 0.037,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 53/185 (28%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS           D++  +  D+G   K E      V +   E      
Sbjct: 216 KVLCALSGGVDSSVVAVLIHKAIGDQLTCMFVDHGLLRKGE---AESVMETFSEGF---- 268

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                        +  I   +  + +      ++         N    VF    A   G 
Sbjct: 269 ------------NMNVIKIDAKDRFLEKLNGVSDPEQKRKIIGNEFIYVFDDEAAKLKGF 316

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G   TD          TI++      L  +    +  PL  L K E   L  ++G
Sbjct: 317 DFLAQGTLYTDIIESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGSELG 376

Query: 189 GQDLV 193
             D +
Sbjct: 377 IPDNI 381


>gi|294497090|ref|YP_003560790.1| GMP synthase [Bacillus megaterium QM B1551]
 gi|294347027|gb|ADE67356.1| GMP synthase (glutamine-hydrolyzing) [Bacillus megaterium QM B1551]
          Length = 506

 Score = 43.0 bits (99), Expect = 0.037,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 53/185 (28%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS           D++  +  D+G   K E      V +   E      
Sbjct: 213 KVLCALSGGVDSSVVAVLIHKAIGDQLTCMFVDHGLLRKGE---AESVMETFSEGF---- 265

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                        +  I   +  + +      ++         N    VF    A   G 
Sbjct: 266 ------------NMNVIKIDAKDRFLEKLNGVSDPEQKRKIIGNEFIYVFDDEAAKLKGF 313

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G   TD          TI++      L  +    +  PL  L K E   L  ++G
Sbjct: 314 DFLAQGTLYTDIIESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGSELG 373

Query: 189 GQDLV 193
             D +
Sbjct: 374 IPDNI 378


>gi|121712429|ref|XP_001273826.1| GMP synthase [Aspergillus clavatus NRRL 1]
 gi|119401978|gb|EAW12400.1| GMP synthase [Aspergillus clavatus NRRL 1]
          Length = 539

 Score = 43.0 bits (99), Expect = 0.037,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 51/193 (26%), Gaps = 6/193 (3%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
             ++ +    L   SGG DS+       +   +R   +  + G     E E    V + +
Sbjct: 224 RKLVGETDHVLGAVSGGVDSTVAAKLMKEAIGNRFHAVLVNNGCMRLNECET---VAETL 280

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
              +      +         + G          +     D                    
Sbjct: 281 NRHLGINLTVVDASKRFLDGLKGVTDPEKKRMFIGGTFIDVFEEEAEKIEAEAEHSGAKI 340

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
               +  +   VI              H  + A+   +  G    + +  PL  L K E 
Sbjct: 341 KWFLQGTLYPDVIESISFKGPSATIKTHHNVGALPKRMIEG--QGMKLIEPLRELFKDEV 398

Query: 181 WKLAQDIGGQDLV 193
            +L +++G    +
Sbjct: 399 RQLGRELGIAHEL 411


>gi|29336962|sp|Q9K4Y8|ASSY_MORAB RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|8671272|emb|CAB95023.1| argininosuccinate synthetase [Moritella abyssi]
          Length = 404

 Score = 43.0 bits (99), Expect = 0.037,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 3/56 (5%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSF-DYGQRNKVELECRLCV 56
          + +     ++ +SGG D+S  L W  + +    +  L   D GQ  +         
Sbjct: 1  MTQTVKKVVVAYSGGLDTSVILPWLQENYDNCEIVALFVADVGQGAEELEGIEAKA 56


>gi|23014122|ref|ZP_00053956.1| COG0519: GMP synthase, PP-ATPase domain/subunit [Magnetospirillum
           magnetotacticum MS-1]
          Length = 444

 Score = 43.0 bits (99), Expect = 0.037,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 57/184 (30%), Gaps = 17/184 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DSS   +   +   D++  +  D G     E E  + V +    +   
Sbjct: 219 SGRVICGLSGGVDSSVVAALLHEAIGDQLTCVFVDTGFMRAGESEQVVSVFRDRFNIKLV 278

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            KD+ G    L L  L  ++     + +      +             FL          
Sbjct: 279 HKDASG----LFLDKLAGLTDPEKKRKIIGATFIDVFEEEARAVGGADFLAQGT------ 328

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                 +     +   +      TI++      L    ++ +  PL  L K E   L ++
Sbjct: 329 ------LYPDVIESVSFTGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRALGRE 382

Query: 187 IGGQ 190
           +G  
Sbjct: 383 LGLP 386


>gi|317497382|ref|ZP_07955704.1| sulfate adenylyltransferase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316895302|gb|EFV17462.1| sulfate adenylyltransferase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 275

 Score = 43.0 bits (99), Expect = 0.038,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 55/183 (30%), Gaps = 16/183 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIV-EL 63
              ++L+S G+DSS  L  AL  F         L  +   + K  ++ R    KK   E+
Sbjct: 2   KKPVMLYSIGKDSSVMLHLALKAFYPEKPPFPFLHVNTTWKFKEMIKFRDETAKKYGLEM 61

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +    +   +  + P       +    T+ +   +        F  GR            
Sbjct: 62  IEYINEDGVKQGVNPFDSGAAYTDIMKTQALKQALNKYGFTAAFGGGRRD--------EE 113

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
                  I     E       + R +  +   + I  G    V    P+    + + WK 
Sbjct: 114 KSRAKERIFSFRNENQAWDPKNQRPEMWKLYNSKIKKGESIRV---FPISNWTETDIWKY 170

Query: 184 AQD 186
            + 
Sbjct: 171 IKR 173


>gi|297529083|ref|YP_003670358.1| argininosuccinate synthase [Geobacillus sp. C56-T3]
 gi|297252335|gb|ADI25781.1| argininosuccinate synthase [Geobacillus sp. C56-T3]
          Length = 406

 Score = 43.0 bits (99), Expect = 0.038,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 53/212 (25%), Gaps = 27/212 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            P  +L +SGG D+S  + W  +R   V     D G     +L+       K+       
Sbjct: 3   NPKLVLAYSGGLDTSVAIKWLQERGYDVIACCLDLG--EGKDLDFVKEKALKVGA----- 55

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                + +++ +    + ++      +                   +       +A   G
Sbjct: 56  ----IKSYVIDVKD--EFANEYALIALQANALYEGKYPLVSALSRPLIAKKLVEIAELEG 109

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +  G                     +   L  +  V          + E  + A+  
Sbjct: 110 AVAVAHGCTGKGNDQVRFE--------VSIKALNPDLDVIAPVREWSWSREEEIEYAKKH 161

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCN 219
           G    V+L    S           +     C 
Sbjct: 162 GIPIPVDLDSPFS------IDQNLWGRSNECG 187


>gi|312110082|ref|YP_003988398.1| NAD+ synthetase [Geobacillus sp. Y4.1MC1]
 gi|311215183|gb|ADP73787.1| NAD+ synthetase [Geobacillus sp. Y4.1MC1]
          Length = 246

 Score = 43.0 bits (99), Expect = 0.038,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 55/184 (29%), Gaps = 23/184 (12%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           A++  SGG DS+         F             +   +       K + + +   +  
Sbjct: 24  AVVGISGGIDSAVVAHLIKRAFPD----------NSLGLIMPCKSNPKDMEDALKVVESC 73

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
             +  I+ L      +H++L   V  ++++    N                +     + N
Sbjct: 74  GIKHFIIDLT----ETHNTLFGEVEKQLKEKGEWNETAARLGDANTRARLRMTTLYAVAN 129

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
               +     +          +  +  ++L          PL+   K E  ++A+ +G  
Sbjct: 130 NYGYMVVGTDNAAEWYTGYFTKYGDGGVDL---------VPLVHFTKGEVREMARILGVP 180

Query: 191 DLVN 194
           D + 
Sbjct: 181 DEII 184


>gi|138896319|ref|YP_001126772.1| argininosuccinate synthase [Geobacillus thermodenitrificans NG80-2]
 gi|196249942|ref|ZP_03148637.1| Argininosuccinate synthase [Geobacillus sp. G11MC16]
 gi|166219967|sp|A4IRS3|ASSY_GEOTN RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|134267832|gb|ABO68027.1| Argininosuccinate synthase [Geobacillus thermodenitrificans NG80-2]
 gi|196210456|gb|EDY05220.1| Argininosuccinate synthase [Geobacillus sp. G11MC16]
          Length = 406

 Score = 43.0 bits (99), Expect = 0.038,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 53/212 (25%), Gaps = 27/212 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            P  +L +SGG D+S  + W  +R   V     D G     +L+       K+       
Sbjct: 3   NPKLVLAYSGGLDTSVAIKWLQERGYDVIACCLDLG--EGKDLDFVKEKALKVGA----- 55

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                + +++ +    + ++      +                   +       +A   G
Sbjct: 56  ----IKSYVIDVKD--EFANEYALIALQANALYEGKYPLVSALSRPLIAKKLVEIAELEG 109

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +  G                     +   L  +  V          + E  + A+  
Sbjct: 110 AVAVAHGCTGKGNDQVRFE--------VSIKALNPDLDVIAPVREWSWSREEEIEYAKKH 161

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCN 219
           G    V+L    S           +     C 
Sbjct: 162 GIPIPVDLDSPFS------IDQNLWGRSNECG 187


>gi|21674668|ref|NP_662733.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Chlorobium tepidum TLS]
 gi|81790728|sp|Q8KBD3|MNMA_CHLTE RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|21647873|gb|AAM73075.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Chlorobium tepidum TLS]
          Length = 366

 Score = 43.0 bits (99), Expect = 0.038,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 14/37 (37%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
          +      ++  SGG DS+      + +   V  L+  
Sbjct: 1  MSSPQHVIIGLSGGVDSAVAACLLIKQGYHVTGLNIR 37


>gi|253680929|ref|ZP_04861732.1| argininosuccinate synthase [Clostridium botulinum D str. 1873]
 gi|253562778|gb|EES92224.1| argininosuccinate synthase [Clostridium botulinum D str. 1873]
          Length = 327

 Score = 43.0 bits (99), Expect = 0.038,   Method: Composition-based stats.
 Identities = 17/132 (12%), Positives = 29/132 (21%), Gaps = 13/132 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL L SGG DS        D+   V  + F          E    + K+I         
Sbjct: 3   KALALISGGLDSILAAKLIKDQGIEVIGICFK---SYFFGPENAKRMTKQID-------- 51

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 ++  +                 +      +  +       L          G  
Sbjct: 52  --IPLEVIDFSKEHFDMTKDPKHGHGKNMNPCIDCHAMMMRYAGELLEKFNADFIITGEV 109

Query: 130 NIVIGVCETDYS 141
                + +   S
Sbjct: 110 LNQRPMSQNKSS 121


>gi|330504149|ref|YP_004381018.1| asparagine synthase [Pseudomonas mendocina NK-01]
 gi|328918435|gb|AEB59266.1| asparagine synthase [Pseudomonas mendocina NK-01]
          Length = 589

 Score = 43.0 bits (99), Expect = 0.038,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 30/87 (34%), Gaps = 12/87 (13%)

Query: 1   MNDIIKKAPSALL----LFSGGQDSSTCLSWALDRFDRVETLSF-----DYGQRNKVELE 51
           M + +     A +    L SGG DSS  +    +       L+F     D G     E +
Sbjct: 249 MREAVAIRQRAAVDVGVLLSGGVDSSMLVGLLREAGVE-NLLTFSIGFQDAGGERGDEFQ 307

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILP 78
               + ++      +    +GE  IL 
Sbjct: 308 YSDLIAQRFATRHHQL--RIGEHEILD 332


>gi|328957187|ref|YP_004374573.1| tRNA-specific 2-thiouridylase MnmA [Carnobacterium sp. 17-4]
 gi|328673511|gb|AEB29557.1| tRNA-specific 2-thiouridylase MnmA [Carnobacterium sp. 17-4]
          Length = 362

 Score = 43.0 bits (99), Expect = 0.038,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 40/180 (22%), Gaps = 11/180 (6%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS        +   V  +             C     +   ++           
Sbjct: 1   MSGGVDSSVTALVLKQQGYDVVGIFMKNWDDTDEFGVC--TATEDYNDVALVANQIGIPY 58

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
           + +             T  +    +        +     I        A  LG   +  G
Sbjct: 59  YSIN--FEKQYWDKVFTYFLEEYKKGRTPNPDVMC-NKEIKFKAFLDYAIELGADYVATG 115

Query: 135 VCETDYSGYPDCRHD------TIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                        H                 L  E       PL  ++K E  K+A++ G
Sbjct: 116 HYAQVERDENGVTHMLRGLDNNKDQTYFLNQLSQEQLAKTLFPLGGMQKSEVRKIAEEAG 175


>gi|260556560|ref|ZP_05828778.1| ATPase [Acinetobacter baumannii ATCC 19606]
 gi|260409819|gb|EEX03119.1| ATPase [Acinetobacter baumannii ATCC 19606]
          Length = 228

 Score = 43.0 bits (99), Expect = 0.038,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 43/117 (36%), Gaps = 7/117 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSF--DYGQR---NKVELECRLCVRKKIV--EL 63
           +++ FSGG+DSS  L  A+   + +  +    + GQR   + + L+      + I     
Sbjct: 14  SIVSFSGGKDSSLALYHAMQTGNVIGLIVMLEEQGQRSRSHAMPLDIIRAQAQAIGLPVF 73

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           M     +  E+  + L        + +     + + ++   +  V     + L    
Sbjct: 74  MASSSWNDYENKFINLLNEAKQKGAEVLVTGDLDMPEHGCWHDRVTKTVGLKLGMPL 130


>gi|255320629|ref|ZP_05361806.1| gmp synthase [Acinetobacter radioresistens SK82]
 gi|262380738|ref|ZP_06073891.1| GMP synthase domain-containing protein [Acinetobacter
           radioresistens SH164]
 gi|255302245|gb|EET81485.1| gmp synthase [Acinetobacter radioresistens SK82]
 gi|262297686|gb|EEY85602.1| GMP synthase domain-containing protein [Acinetobacter
           radioresistens SH164]
          Length = 522

 Score = 43.0 bits (99), Expect = 0.038,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 53/190 (27%), Gaps = 19/190 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMP 65
               LL  SGG DSS   +       D++  +  D G  R     +      + +   + 
Sbjct: 224 NEKVLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRLNEGDQVMQMFAQNMGIRVI 283

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +               LG ++     +     I    +       R +  + F A     
Sbjct: 284 RAAAE--------ERFLGALAGEVDPEKKRKIIGREFIEVFAEEARKLDGVKFLA----- 330

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                  I     + +     +   I++      L  +    +  PL  L K E  KL  
Sbjct: 331 ----QGTIYPDVIESAASKQGKAHVIKSHHNVGGLPDDLAFELVEPLRDLFKDEVRKLGT 386

Query: 186 DIGGQDLVNL 195
            +G    +  
Sbjct: 387 TLGLPHSMIY 396


>gi|261418229|ref|YP_003251911.1| argininosuccinate synthase [Geobacillus sp. Y412MC61]
 gi|319767811|ref|YP_004133312.1| argininosuccinate synthase [Geobacillus sp. Y412MC52]
 gi|261374686|gb|ACX77429.1| argininosuccinate synthase [Geobacillus sp. Y412MC61]
 gi|317112677|gb|ADU95169.1| argininosuccinate synthase [Geobacillus sp. Y412MC52]
          Length = 406

 Score = 43.0 bits (99), Expect = 0.038,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 53/212 (25%), Gaps = 27/212 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            P  +L +SGG D+S  + W  +R   V     D G     +L+       K+       
Sbjct: 3   NPKLVLAYSGGLDTSVAIKWLQERGYDVIACCLDLG--EGKDLDFVKEKALKVGA----- 55

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                + +++ +    + ++      +                   +       +A   G
Sbjct: 56  ----IKSYVIDVKD--EFANEYALIALQANALYEGKYPLVSALSRPLIAKKLVEIAELEG 109

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +  G                     +   L  +  V          + E  + A+  
Sbjct: 110 AVAVAHGCTGKGNDQVRFE--------VSIKALNPDLEVIAPVREWSWSREEEIEYAKKH 161

Query: 188 GGQDLVNLILEESHTCYLGKRDKRYEWGYGCN 219
           G    V+L    S           +     C 
Sbjct: 162 GIPIPVDLDSPFS------IDQNLWGRSNECG 187


>gi|193078035|gb|ABO12961.2| hypothetical protein A1S_2544 [Acinetobacter baumannii ATCC 17978]
          Length = 228

 Score = 43.0 bits (99), Expect = 0.038,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 43/117 (36%), Gaps = 7/117 (5%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSF--DYGQR---NKVELECRLCVRKKIV--EL 63
           +++ FSGG+DSS  L  A+   + +  +    + GQR   + + L+      + I     
Sbjct: 14  SIVSFSGGKDSSLALYHAMQTGNVIGLIVMLEEQGQRSRSHAMPLDIIRAQAQAIGLPVF 73

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           M     +  E+  + L        + +     + + ++   +  V     + L    
Sbjct: 74  MASSSWNDYENKFINLLNEAKQKGAEVLVTGDLDMPEHGCWHDRVTKTVGLKLGMPL 130


>gi|94496230|ref|ZP_01302808.1| GMP synthase [Sphingomonas sp. SKA58]
 gi|94424409|gb|EAT09432.1| GMP synthase [Sphingomonas sp. SKA58]
          Length = 523

 Score = 43.0 bits (99), Expect = 0.038,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 57/184 (30%), Gaps = 17/184 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+       +   D++  +  D+G     E        +++V L  +  
Sbjct: 227 RVICGLSGGVDSAVAAVLIHEAIGDQLTCVFVDHGLMRLGE-------AEQVVSLFREHY 279

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                        LG +   +   +   K +        V       +  A  LA     
Sbjct: 280 GIKLVHVNAEDRFLGGL---AGLTDPEKKRKFIGGEFIAVFEEEAAKIGGADFLAQGT-- 334

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
               +     +   +      TI++      L    ++ +  PL  L K E   L +++G
Sbjct: 335 ----LYPDVIESVSFTGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRVLGKELG 390

Query: 189 GQDL 192
             D+
Sbjct: 391 LPDI 394


>gi|83814132|ref|YP_446319.1| argininosuccinate synthase [Salinibacter ruber DSM 13855]
 gi|294508256|ref|YP_003572314.1| Argininosuccinate synthase [Salinibacter ruber M8]
 gi|83755526|gb|ABC43639.1| argininosuccinate synthase [Salinibacter ruber DSM 13855]
 gi|294344584|emb|CBH25362.1| Argininosuccinate synthase [Salinibacter ruber M8]
          Length = 413

 Score = 43.0 bits (99), Expect = 0.038,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 24/74 (32%), Gaps = 2/74 (2%)

Query: 11 ALLL-FSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
          A++L FSGG D S             V T++ D G     +        + +        
Sbjct: 2  AIVLAFSGGLDTSFCVPYLQATHDAPVHTVTVDTGGLTDDDRTAIEARARHLGADRHHLI 61

Query: 69 DSLGEDHILPLAIL 82
          D     +   L+ L
Sbjct: 62 DGRAPLYEDHLSYL 75


>gi|146296722|ref|YP_001180493.1| PP family ATPase [Caldicellulosiruptor saccharolyticus DSM 8903]
 gi|145410298|gb|ABP67302.1| ATP-utilizing enzymes of the PP-loop superfamily-like protein
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 270

 Score = 43.0 bits (99), Expect = 0.038,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 64/191 (33%), Gaps = 4/191 (2%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKK 59
           + D+++   S L+ FSGG DS+  L    D   +    +        K E +    +   
Sbjct: 14  LKDLLQSYKSVLVAFSGGVDSTFLLKVCRDVLGENCVAVFSSSALSPKREKQEAEKLAGS 73

Query: 60  IVELMPKWKDSLGE-DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
           I   +   +  + + +  L   +               +++++   N  V G NI  L  
Sbjct: 74  IGAKLIVLERDIFDNEDFLKNDMFRCYYCKKDLIKKLKELKEDLKINQIVEGSNIDDLKD 133

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP--LMWLK 176
                  L   NI   + E  ++            + T     M   VT       + L+
Sbjct: 134 FRPGRKALEEENIKSPLLEVGFTKDEIRFLSKEFGLPTFDKPSMACLVTRIPYGSQVTLQ 193

Query: 177 KYETWKLAQDI 187
           K E  + A+++
Sbjct: 194 KLEMIEKAEEV 204


>gi|329298696|ref|ZP_08256032.1| tRNA(Ile)-lysidine synthetase [Plautia stali symbiont]
          Length = 432

 Score = 43.0 bits (99), Expect = 0.039,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 18/50 (36%), Gaps = 5/50 (10%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFD-----RVETLSFDYGQRNKVELECRL 54
            +L FSGG DSS  L   +         RV TL   +G     +     
Sbjct: 15 RCVLAFSGGLDSSVLLYQLVSWQRQQPQLRVRTLHVHHGFSPNADRWAAH 64


>gi|325294837|ref|YP_004281351.1| PP-loop domain protein [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065285|gb|ADY73292.1| PP-loop domain protein [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 312

 Score = 43.0 bits (99), Expect = 0.039,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 22/64 (34%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           ++  K    L+  SGG+DS +          +        G       +  L + KK  E
Sbjct: 47  NMFSKDEKVLIAVSGGKDSLSLWYALHRLGYKTYGFHISLGIEGWEYSKKSLDICKKFSE 106

Query: 63  LMPK 66
            + +
Sbjct: 107 RIER 110


>gi|262068274|ref|ZP_06027886.1| NAD+ synthetase [Fusobacterium periodonticum ATCC 33693]
 gi|291378012|gb|EFE85530.1| NAD+ synthetase [Fusobacterium periodonticum ATCC 33693]
          Length = 258

 Score = 43.0 bits (99), Expect = 0.039,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 19/60 (31%), Gaps = 2/60 (3%)

Query: 10 SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           A+L  SGG DS+       D    + V  +   Y   N   L     V + +       
Sbjct: 30 KAVLGLSGGIDSALAAYLLRDALGKENVLAIMMPYKSSNPDSLNHAKLVVEDLGINSKVI 89


>gi|229825875|ref|ZP_04451944.1| hypothetical protein GCWU000182_01239 [Abiotrophia defectiva ATCC
           49176]
 gi|229789895|gb|EEP26009.1| hypothetical protein GCWU000182_01239 [Abiotrophia defectiva ATCC
           49176]
          Length = 477

 Score = 43.0 bits (99), Expect = 0.039,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 29/85 (34%), Gaps = 11/85 (12%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRF---DRVETLSFDYGQR---NKVELECRLC 55
           N ++ +    +   SGG DS  CL   L      + +  +  ++G R      + E    
Sbjct: 27  NKLLHENEKIVAGVSGGADS-VCLLLVLKDILNPENIVAVHINHGIRGEEAARDEEFVKK 85

Query: 56  VRKKIVELMPK----WKDSLGEDHI 76
           + +K    +        +   +  I
Sbjct: 86  LCEKYNICLEIRHLSIPEYSKKHKI 110


>gi|254490943|ref|ZP_05104125.1| NAD synthase family [Methylophaga thiooxidans DMS010]
 gi|224463852|gb|EEF80119.1| NAD synthase family [Methylophaga thiooxydans DMS010]
          Length = 546

 Score = 43.0 bits (99), Expect = 0.039,   Method: Composition-based stats.
 Identities = 21/192 (10%), Positives = 53/192 (27%), Gaps = 3/192 (1%)

Query: 11  ALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            ++  SGG DS+  L+ A+D    ++V  +        ++ L+    +   +        
Sbjct: 287 VVIGLSGGIDSALTLALAVDAIGAEKVHAVMMPTRYTAQISLDDAKAMADGLGVHYSVMS 346

Query: 69  -DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            + + E  +  L+          T+          +          + L         +G
Sbjct: 347 IEPVFESFLTTLSDQFTGLPVDTTEENIQARCRGIILMALSNKTGSMVLATGNKSEMAVG 406

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            + +   +           +    +         M     + T     +          +
Sbjct: 407 YSTLYGDMAGGYSPLKDVYKTMVYQLSHYRNTRSMVIPERIITRPPSAELAADQLDQDSL 466

Query: 188 GGQDLVNLILEE 199
              +L++ ILE 
Sbjct: 467 PPYELLDKILER 478


>gi|224023875|ref|ZP_03642241.1| hypothetical protein BACCOPRO_00592 [Bacteroides coprophilus DSM
           18228]
 gi|224017097|gb|EEF75109.1| hypothetical protein BACCOPRO_00592 [Bacteroides coprophilus DSM
           18228]
          Length = 437

 Score = 43.0 bits (99), Expect = 0.039,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 36/119 (30%), Gaps = 10/119 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              L+  SGG DS   L    +   R+E    ++  R + E +      +++ E      
Sbjct: 20  ERVLVALSGGADSVALLCVLQELGYRLEAAHCNFHLRGE-ESDRDERFVRQLCE------ 72

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                 H++        ++++  K              F   R+       A   +R  
Sbjct: 73  RRQIPLHVIH---FSTGAYAASRKISIEMAARELRYRWFEELRDQGGFRVVAVAHHRDD 128


>gi|218706008|ref|YP_002413527.1| GMP synthase [Escherichia coli UMN026]
 gi|293405945|ref|ZP_06649937.1| GMP synthase [Escherichia coli FVEC1412]
 gi|298381747|ref|ZP_06991346.1| GMP synthase [Escherichia coli FVEC1302]
 gi|300898393|ref|ZP_07116736.1| GMP synthase protein [Escherichia coli MS 198-1]
 gi|331673959|ref|ZP_08374722.1| GMP synthase (glutamine-hydrolyzing) [Escherichia coli TA280]
 gi|226738449|sp|B7N691|GUAA_ECOLU RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|218433105|emb|CAR14000.1| GMP synthetase (glutamine aminotransferase) [Escherichia coli
           UMN026]
 gi|291428153|gb|EFF01180.1| GMP synthase [Escherichia coli FVEC1412]
 gi|298279189|gb|EFI20703.1| GMP synthase [Escherichia coli FVEC1302]
 gi|300357933|gb|EFJ73803.1| GMP synthase protein [Escherichia coli MS 198-1]
 gi|331069232|gb|EGI40624.1| GMP synthase (glutamine-hydrolyzing) [Escherichia coli TA280]
          Length = 525

 Score = 43.0 bits (99), Expect = 0.039,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVLDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IVHVPAEARFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|315230892|ref|YP_004071328.1| hypothetical protein TERMP_01129 [Thermococcus barophilus MP]
 gi|315183920|gb|ADT84105.1| hypothetical protein TERMP_01129 [Thermococcus barophilus MP]
          Length = 225

 Score = 43.0 bits (99), Expect = 0.039,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)

Query: 14 LFSGGQDSSTCLSWALDRFDRV-ETLSFD 41
          LFSGG+DS+  L WA+ +   V   +S  
Sbjct: 6  LFSGGKDSTYALYWAMQQGFDVKYLVSIH 34


>gi|188533182|ref|YP_001906979.1| GMP synthase [Erwinia tasmaniensis Et1/99]
 gi|188028224|emb|CAO96082.1| GMP synthase [glutamine-hydrolyzing] [Erwinia tasmaniensis Et1/99]
          Length = 526

 Score = 43.0 bits (99), Expect = 0.039,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 50/184 (27%), Gaps = 17/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS           DR+  +  D G    + L     V +   +     
Sbjct: 229 DKVILGLSGGVDSSVTAMLLHRAIGDRLTCVFVDNG---LLRLNEAEQVMEMFGDHFGLN 285

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  ++    A+ G     +  K +     +                           
Sbjct: 286 IIHVAAENRFLDALAGTDEPEAKRKIIGRVFVEVFDEEATKLNDVKWLAQGT-------- 337

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 338 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKLGLVEPLKELFKDEVRKIGLEL 392

Query: 188 GGQD 191
           G   
Sbjct: 393 GLPH 396


>gi|126696814|ref|YP_001091700.1| tRNA-specific 2-thiouridylase MnmA [Prochlorococcus marinus str.
           MIT 9301]
 gi|205816922|sp|A3PEC4|MNMA_PROM0 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|126543857|gb|ABO18099.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prochlorococcus marinus str. MIT 9301]
          Length = 385

 Score = 43.0 bits (99), Expect = 0.039,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 54/192 (28%), Gaps = 21/192 (10%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++  SGG DSS   +  ++R   VE L+        +      C  + +V+     +D  
Sbjct: 27  IVGLSGGVDSSLSAALLVERGWNVEGLTL------WLIKGQGSCCSEGLVDAAGLCEDLG 80

Query: 72  GEDHILPLAIL---------------GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
               I+    +               G         N  +K ++             I  
Sbjct: 81  INHKIIDSREIFEREVIKKTTESYEKGFTPLPCSMCNKNVKFEEMLNYAVNKKDFTHIAT 140

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
              A +        +     +           +         +L  E    +  PL  +K
Sbjct: 141 GHYARIKKSSYAETLDCKSFKFKDFLLLRGADENKDQSYFLYSLSQEVLSRLEFPLGEMK 200

Query: 177 KYETWKLAQDIG 188
           K ET K A  +G
Sbjct: 201 KEETRKEALRLG 212


>gi|15613170|ref|NP_241473.1| GMP synthase [Bacillus halodurans C-125]
 gi|13627137|sp|Q9KF78|GUAA_BACHD RecName: Full=Putative GMP synthase [glutamine-hydrolyzing];
           AltName: Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|10173221|dbj|BAB04326.1| GMP synthetase [Bacillus halodurans C-125]
          Length = 513

 Score = 43.0 bits (99), Expect = 0.039,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 52/187 (27%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E +                
Sbjct: 219 KQVLCALSGGVDSSVVAVLIHKAIGDQLTCMFIDHGLLRKGEADS--------------- 263

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                           ++           K++  + P          F+      A +L 
Sbjct: 264 -----VMKTFSEGFNMNVIKIDAKDRFLSKLEGVSDPEQKRKIIGNEFIYVFEEEASKLK 318

Query: 128 IT-NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +  G   TD          TI++      L  +    +  PL  L K E  KL  +
Sbjct: 319 DMDFLAQGTLYTDIIESGTATAQTIKSHHNVGGLPEDMRFELIEPLNTLFKDEVRKLGTE 378

Query: 187 IGGQDLV 193
           +G  D V
Sbjct: 379 LGIPDEV 385


>gi|331270460|ref|YP_004396952.1| hypothetical protein CbC4_2290 [Clostridium botulinum BKT015925]
 gi|329127010|gb|AEB76955.1| conserved hypothetical protein [Clostridium botulinum BKT015925]
          Length = 327

 Score = 43.0 bits (99), Expect = 0.039,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 3/63 (4%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFD---YGQRNKVELECRLCVRKKIVELMPK 66
           AL L SGG DS        D+   V  + F    +G  N   +  ++ +  ++V+   +
Sbjct: 3  KALALISGGLDSILAAKLIKDQGIEVIGICFKSYFFGPDNAKRMTKQIDIPLEVVDFSKE 62

Query: 67 WKD 69
            D
Sbjct: 63 HFD 65


>gi|322368466|ref|ZP_08043035.1| GMP synthase subunit B [Haladaptatus paucihalophilus DX253]
 gi|320552482|gb|EFW94127.1| GMP synthase subunit B [Haladaptatus paucihalophilus DX253]
          Length = 305

 Score = 43.0 bits (99), Expect = 0.039,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 48/187 (25%), Gaps = 28/187 (14%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           A++  SGG DSS     A     D++  +  D G   K E                    
Sbjct: 24  AIIALSGGVDSSVAAGLAYKAIGDQLTPVYVDTGLMRKGETNQIRK-------------- 69

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     + +  +            +     P          F+      A      
Sbjct: 70  --------TFSYMSSLEVVEAEDRFFDALSGVTDPEEKRKVIGEQFIREFEREARVTDAD 121

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT-VHTPLMWLKKYETWKLAQDIG 188
            +V                  I++      L        +  P+  L K E  ++A+ +G
Sbjct: 122 YLVQ----GTIYPDRIESEGGIKSHHNVGGLPDVVDFDGIVEPVRDLYKDEVREVARALG 177

Query: 189 GQDLVNL 195
            ++++  
Sbjct: 178 MEEIIAE 184


>gi|320449292|ref|YP_004201388.1| NAD+ synthetase [Thermus scotoductus SA-01]
 gi|320149461|gb|ADW20839.1| NAD+ synthetase [Thermus scotoductus SA-01]
          Length = 281

 Score = 43.0 bits (99), Expect = 0.039,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            A++  SGG DS+T L+ A+      +V  L   +   + +  E    V +     + +
Sbjct: 38 EKAIVAVSGGVDSATTLALAVRALGRKQVHALFLPHRDSSPLSREHAYLVAETFGVDLEE 97

Query: 67 WK 68
            
Sbjct: 98 VD 99


>gi|308048961|ref|YP_003912527.1| asparagine synthase (glutamine-hydrolyzing) [Ferrimonas balearica
           DSM 9799]
 gi|307631151|gb|ADN75453.1| asparagine synthase (glutamine-hydrolyzing) [Ferrimonas balearica
           DSM 9799]
          Length = 554

 Score = 43.0 bits (99), Expect = 0.039,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 45/180 (25%), Gaps = 13/180 (7%)

Query: 13  LLFSGGQDSSTCLSWALDRFDR------------VETLSFDYGQRNKVELECRLCVRKKI 60
           +L SGG DSS   + A     R             +  SF  G     +L+    V   +
Sbjct: 232 VLLSGGLDSSITSALAKKYSQRRIEEDETSPAWWPQLHSFAIGLEGAPDLKAAAEVADHL 291

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  +      ++ I  L  +     +     V        +          + L    
Sbjct: 292 GTVHHELN-FTVQEGIDALRDVIYHLETYDVTTVRAATPMYLMARMIKAMGIKMVLSGEG 350

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           +     G            +      + D +   +        +   V   + +L K   
Sbjct: 351 SDELFGGYLYFHKAPNAQAFHEETVRKLDKLHLYDCLRANKAMAAWGVEARVPFLDKAFI 410


>gi|262371371|ref|ZP_06064689.1| GMP synthetase [Acinetobacter johnsonii SH046]
 gi|262313708|gb|EEY94757.1| GMP synthetase [Acinetobacter johnsonii SH046]
          Length = 522

 Score = 43.0 bits (99), Expect = 0.039,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 51/183 (27%), Gaps = 19/183 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKW 67
             LL  SGG DSS   +       D++  +  D G  R     +      K +       
Sbjct: 226 KVLLGLSGGVDSSVVAALLHRAIGDQLTCVFVDNGLLRLNEGEQVMDMFAKNMG------ 279

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    +  A   +   ++L   V  + +   +   F+                  G
Sbjct: 280 -------IRVIRADAEERFLTALAGEVDPEKKRKIIGREFIEVFAEEARKLDGVNFLAQG 332

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                      + +   + +   I++      L  +    +  P+  L K E  +L   +
Sbjct: 333 TIY----PDVIESAATKNGKAHVIKSHHNVGGLPDDLAFELVEPIRDLFKDEVRRLGTTL 388

Query: 188 GGQ 190
           G  
Sbjct: 389 GLP 391


>gi|172038916|ref|YP_001805417.1| asparagine synthetase B [Cyanothece sp. ATCC 51142]
 gi|171700370|gb|ACB53351.1| asparagine synthetase [Cyanothece sp. ATCC 51142]
          Length = 501

 Score = 43.0 bits (99), Expect = 0.039,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 19/53 (35%), Gaps = 2/53 (3%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            SGG DSS   + A      +   +F  G     ++     V   +  +  ++
Sbjct: 226 LSGGLDSSIIAAIAKKHKSELH--TFSVGVEGSKDINAARLVSDYLGTIHHEY 276


>gi|126736304|ref|ZP_01752046.1| GMP synthase [Roseobacter sp. CCS2]
 gi|126714125|gb|EBA10994.1| GMP synthase [Roseobacter sp. CCS2]
          Length = 519

 Score = 43.0 bits (99), Expect = 0.039,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
            +   SGG DSS   +   +   D++  +  D+G
Sbjct: 224 VICALSGGVDSSVAAALLHEAIGDQLTCVFVDHG 257


>gi|14209498|dbj|BAB55898.1| NodP [Bradyrhizobium elkanii]
          Length = 299

 Score = 43.0 bits (99), Expect = 0.039,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 10/180 (5%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCV 56
           M D++ +    ++L+S G+DSS  L  A+  F         L  D   + +  +  R   
Sbjct: 17  MRDVVAEFKKPVMLYSIGKDSSVMLHIAIKAFYPAKLPFPLLHVDTTWKFREMISFRDAT 76

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
            K++   +    +  G    +     G   H+ + K  A+K   +        G      
Sbjct: 77  AKRLGLDLIVHVNEEGIARGINPIDSGSALHTRVMKTDALKQALDLHEFDAAFGGARRD- 135

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
                         I+            + R +      T I  G    V   +    L 
Sbjct: 136 -----EEKSRAKERILSFRSSGHVWDPRNQRPELWNLFNTRIRQGETMRVFAMSNWTELD 190


>gi|13357633|ref|NP_077907.1| hypothetical protein UU077 [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|61217428|sp|Q9PR68|TILS_UREPA RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|11356774|pir||A82937 conserved hypothetical UU077 [imported] - Ureaplasma urealyticum
 gi|6899028|gb|AAF30482.1|AE002107_6 conserved hypothetical [Ureaplasma parvum serovar 3 str. ATCC
           700970]
          Length = 333

 Score = 43.0 bits (99), Expect = 0.039,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 45/161 (27%), Gaps = 17/161 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR-------------- 53
               L   SGG DS   L+    R  RV     +Y +R   + + +              
Sbjct: 17  NKKYLAAVSGGPDSMAMLNMY-KRNIRVVC-HVNYHKRESSDRDQQIVVDFCRKNNLIIE 74

Query: 54  -LCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN 112
            L V +K+ E      +   +  ++      +I      +N+ +    ++   T    R 
Sbjct: 75  ILDVDEKVYERYGHIDNFQTKARLIRYDFFKEIGKKYNIENLYIAHNFDDFLETAYMQRA 134

Query: 113 IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRA 153
                    +     I  I++             R+     
Sbjct: 135 RQSKALFYGIKESNVINGIIVKRPVLFVRKQTLQRYCDENK 175


>gi|147674336|ref|YP_001217758.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae O395]
 gi|153817074|ref|ZP_01969741.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae NCTC 8457]
 gi|227082366|ref|YP_002810917.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae M66-2]
 gi|229507683|ref|ZP_04397188.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae BX 330286]
 gi|262167735|ref|ZP_06035437.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae RC27]
 gi|298500383|ref|ZP_07010188.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae MAK 757]
 gi|172047611|sp|A5F623|TILS_VIBC3 RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
          Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
          Full=tRNA(Ile)-lysidine synthetase
 gi|254789054|sp|C3LPP6|TILS_VIBCM RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
          Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
          Full=tRNA(Ile)-lysidine synthetase
 gi|126512342|gb|EAZ74936.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae NCTC 8457]
 gi|146316219|gb|ABQ20758.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae O395]
 gi|227010254|gb|ACP06466.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae M66-2]
 gi|227014138|gb|ACP10348.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae O395]
 gi|229355188|gb|EEO20109.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae BX 330286]
 gi|262023800|gb|EEY42499.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae RC27]
 gi|297541076|gb|EFH77130.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae MAK 757]
          Length = 440

 Score = 43.0 bits (99), Expect = 0.039,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 17/52 (32%), Gaps = 4/52 (7%)

Query: 10 SALLLFSGGQDSSTCLSWALDR----FDRVETLSFDYGQRNKVELECRLCVR 57
            LL  SGG DS   L+            V  +   +G     +   + C R
Sbjct: 19 KILLALSGGVDSQVLLALLARGRDEFGWDVTAVHVHHGLSPNADQWAQHCQR 70


>gi|47093161|ref|ZP_00230936.1| conserved hypothetical protein/hypoxanthine
           phosphoribosyltransferase, fusion [Listeria
           monocytogenes str. 4b H7858]
 gi|226222848|ref|YP_002756955.1| hypothetical protein Lm4b_00217 [Listeria monocytogenes Clip81459]
 gi|254933059|ref|ZP_05266418.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|21667249|gb|AAM74001.1|AF467001_2 YacA/HprT-like protein [Listeria monocytogenes]
 gi|47018468|gb|EAL09226.1| conserved hypothetical protein/hypoxanthine
           phosphoribosyltransferase, fusion [Listeria
           monocytogenes str. 4b H7858]
 gi|225875310|emb|CAS04007.1| Hypothetical protein of unknown function [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
 gi|293584617|gb|EFF96649.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|332310628|gb|EGJ23723.1| Bifunctional protein tilS/hprT [Listeria monocytogenes str. Scott
           A]
          Length = 648

 Score = 43.0 bits (99), Expect = 0.039,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 54/194 (27%), Gaps = 18/194 (9%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRV-ETLSFDYGQRNKVELECRLCVRKKIV 61
           D+I+     L+  SGG DS   L +  +      E +S  +   +  E        + +V
Sbjct: 16  DLIRSDDKLLVAVSGGPDSLALLHFLWNSNLVPKEAISVAHINHHLRENAANE---QNVV 72

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           E   + +        + +    +     + +   +   D           N + L   A 
Sbjct: 73  EAFCESQGIPFYIEEVDVKSRAESLQKGIEETARIVRYDFFEKVMAEKKINKLALAHHAD 132

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
                 +  +V G     +SG    R                       P + + K E  
Sbjct: 133 DQIETILMRLVRGSASIGWSGIQPKRELKGGQA--------------IRPFLPITKAEII 178

Query: 182 KLAQDIGGQDLVNL 195
             AQ       ++ 
Sbjct: 179 DYAQKHELAYEIDE 192


>gi|330752792|emb|CBL88311.1| argininosuccinate synthase [uncultured Dokdonia sp.]
          Length = 393

 Score = 43.0 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 18/55 (32%), Gaps = 1/55 (1%)

Query: 9  PSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
             +L +SGG D S     +  +    V  +S + G     E+         +  
Sbjct: 2  KKLILAYSGGLDTSYCVKYFTAEMGCEVHAVSVNTGGFTDQEIANNKEKALALGA 56


>gi|319407350|emb|CBI80995.1| NH3-dependent NAD synthetase [Bartonella sp. 1-1C]
          Length = 558

 Score = 43.0 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 47/150 (31%), Gaps = 3/150 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
            +    LL FSGG DS+ C + A+D    +RV  +   Y   ++  L+      + +   
Sbjct: 288 NRFKDVLLGFSGGIDSALCAAIAVDALGAERVCAVMMPYYYTSQESLKDAKDCARLLGCR 347

Query: 64  MPKWKDS-LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                   L E  +  +A +     + +T+         ++        + + +      
Sbjct: 348 YEIIPIFKLVESFLSIMAPIFSGLKTDVTEENLQSRIRGSVLMALSNKFDSMVITTGNKS 407

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIR 152
              +G   +   +           +    +
Sbjct: 408 EMAVGYATLYGDMNGGFNPIKDIYKTQVYK 437


>gi|315053253|ref|XP_003176000.1| GMP synthase [Arthroderma gypseum CBS 118893]
 gi|311337846|gb|EFQ97048.1| GMP synthase [Arthroderma gypseum CBS 118893]
          Length = 541

 Score = 43.0 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 57/195 (29%), Gaps = 12/195 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
             ++ +    +   SGG DS+       +   DR   +  D G    + L     VR+ +
Sbjct: 228 RAMVGEHGQVIGAVSGGVDSTVAAKLMKEAIGDRFHAVLVDNG---VMRLNEAEIVRETL 284

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                  K+      ++  +         +      +    N             +  +A
Sbjct: 285 ------TKNLGINLTVIDASEKFLGRLKGVIDPEQKRKIIGNTFIEIFQDTAKTIVEQSA 338

Query: 121 TLAYRLGITNIVIGVCETDY--SGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
                  I  ++ G    D   S        TI+       L    H+ +  PL  L K 
Sbjct: 339 GYKEGDKIEWLLQGTLYPDVIESISFKGPSATIKTHHNVGGLLKGMHLKLIEPLRELFKD 398

Query: 179 ETWKLAQDIGGQDLV 193
           E   L  ++G  + +
Sbjct: 399 EVRSLGTNLGIPEDL 413


>gi|291191994|gb|ADD83070.1| thiamine biosynthesis protein ThiI [Enterobacter cloacae]
          Length = 195

 Score = 43.0 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 17/53 (32%), Gaps = 2/53 (3%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
            L L SGG DS       + R  RV    F+ G            V   +  L
Sbjct: 144 VLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGG--AAHEIGVRQVAHYLQAL 194


>gi|281415846|gb|ADA69249.1| asparagine synthase [Nostoc sp. 'Peltigera membranacea cyanobiont']
          Length = 647

 Score = 43.0 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 45/189 (23%), Gaps = 19/189 (10%)

Query: 15  FSGGQDSSTCLSWALDRFDRVE-TLSFDYGQRNKVELECRLCVRKKIVELMPKW------ 67
            SGG DSST L  A           +  + +    E        + +   +         
Sbjct: 264 LSGGLDSSTVLGMAARHTSHPIQAFTIAFDRPLDDEQAFARETVEHVGANLHILPVNQSD 323

Query: 68  -------KDSLGEDHILPLAILGDISHSSLTKN-----VAMKIQDNNLPNTFVPGRNIIF 115
                      GE     ++  G    S  T++     V      + +   +V  R  + 
Sbjct: 324 LVSHFADAVYYGERLTNSISTAGKYLLSKATRDMGYKVVLTGEGSDEIFGGYVAMREDML 383

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
           L        ++    +         S        +   + +           +      L
Sbjct: 384 LYNTEGQDEQIVQQLLAQLQLNNPVSALLLETDASEMPLNSVQQTLGFVPTWLKNVSADL 443

Query: 176 KKYETWKLA 184
            K    KL 
Sbjct: 444 MKAGIMKLC 452


>gi|170761927|ref|YP_001752156.1| tRNA(Ile)-lysidine synthetase [Ureaplasma parvum serovar 3 str.
           ATCC 27815]
 gi|183508435|ref|ZP_02957979.1| tRNA(Ile)-lysidine synthetase [Ureaplasma parvum serovar 14 str.
           ATCC 33697]
 gi|186701596|ref|ZP_02971305.1| tRNA(Ile)-lysidine synthetase [Ureaplasma parvum serovar 6 str.
           ATCC 27818]
 gi|168827504|gb|ACA32766.1| tRNA(Ile)-lysidine synthetase [Ureaplasma parvum serovar 3 str.
           ATCC 27815]
 gi|182675843|gb|EDT87748.1| tRNA(Ile)-lysidine synthetase [Ureaplasma parvum serovar 14 str.
           ATCC 33697]
 gi|186700826|gb|EDU19108.1| tRNA(Ile)-lysidine synthetase [Ureaplasma parvum serovar 6 str.
           ATCC 27818]
          Length = 330

 Score = 43.0 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 45/161 (27%), Gaps = 17/161 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR-------------- 53
               L   SGG DS   L+    R  RV     +Y +R   + + +              
Sbjct: 14  NKKYLAAVSGGPDSMAMLNMY-KRNIRVVC-HVNYHKRESSDRDQQIVVDFCRKNNLIIE 71

Query: 54  -LCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN 112
            L V +K+ E      +   +  ++      +I      +N+ +    ++   T    R 
Sbjct: 72  ILDVDEKVYERYGHIDNFQTKARLIRYDFFKEIGKKYNIENLYIAHNFDDFLETAYMQRA 131

Query: 113 IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRA 153
                    +     I  I++             R+     
Sbjct: 132 RQSKALFYGIKESNVINGIIVKRPVLFVRKQTLQRYCDENK 172


>gi|167753698|ref|ZP_02425825.1| hypothetical protein ALIPUT_01979 [Alistipes putredinis DSM 17216]
 gi|167658323|gb|EDS02453.1| hypothetical protein ALIPUT_01979 [Alistipes putredinis DSM 17216]
          Length = 339

 Score = 43.0 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 43/169 (25%), Gaps = 6/169 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K    LL FSGG DS   +         V  L+ D    + +  + RL        L   
Sbjct: 2   KDNRVLLGFSGGIDSFAAVGLLQAAGYHVTALTLDMRGDSALLEKARLRA----GALGIP 57

Query: 67  WKDSLGEDH--ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
           W+     +      +    D      T     +              + + +   AT  Y
Sbjct: 58  WRMRSVRERFEREVVDYFTDSYFRGCTPAPCTRCNSRIKWPCLAAEADALGIRHIATGHY 117

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
               +               D  +      +  ++  +    TV    +
Sbjct: 118 FRITSAGGKRYVTRAADNRKDQSYYLWDLPQEILDRVLTPMGTVIKRNI 166


>gi|152982955|ref|YP_001353959.1| LPS biosynthesis protein WbpG [Janthinobacterium sp. Marseille]
 gi|151283032|gb|ABR91442.1| LPS biosynthesis protein WbpG [Janthinobacterium sp. Marseille]
          Length = 382

 Score = 43.0 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 5/89 (5%)

Query: 1   MNDIIKKA---PS--ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLC 55
           M D +KKA       A++  SGG DSS  +        R+  + FD    +KV  E    
Sbjct: 56  MIDDMKKAGVGKKYDAIIGVSGGCDSSYLVHTMHAAGLRLLAVHFDNTWNSKVATENIHN 115

Query: 56  VRKKIVELMPKWKDSLGEDHILPLAILGD 84
           + +K+   +     +  E   +  + L  
Sbjct: 116 LLEKLGIDLFTIVVNNKEYDDIYRSFLKA 144


>gi|153814176|ref|ZP_01966844.1| hypothetical protein RUMTOR_00385 [Ruminococcus torques ATCC 27756]
 gi|317499972|ref|ZP_07958208.1| argininosuccinate synthase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|145848572|gb|EDK25490.1| hypothetical protein RUMTOR_00385 [Ruminococcus torques ATCC 27756]
 gi|316898689|gb|EFV20724.1| argininosuccinate synthase [Lachnospiraceae bacterium 8_1_57FAA]
          Length = 406

 Score = 43.0 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 25/211 (11%), Positives = 60/211 (28%), Gaps = 23/211 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L +SGG D++  + W  + F   V     D GQ  +++         K+      
Sbjct: 3   KEKVILAYSGGLDTTAIIPWLKENFDYDVVCCCIDCGQGEELDGLEERA---KLSGASKL 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           + +++ ++      +       +        +   ++    +  R +         A   
Sbjct: 60  YIENIIDEFCDDYVM---PCVKAGAVYENKYLLGTSMARPVIAKRLVEIARKEGATAICH 116

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G T         +           I A     ++                + E  +  + 
Sbjct: 117 GATGKGNDQIRFELGIKALAPDLKIIAPWRMTDV-----------WTMQSREEEIEYCKQ 165

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
            G    ++L  +  H+ Y   R+  +    G
Sbjct: 166 HG----IDLPFDAKHS-YSRDRNLWHISHEG 191


>gi|89891429|ref|ZP_01202935.1| GMP synthase [Flavobacteria bacterium BBFL7]
 gi|89516460|gb|EAS19121.1| GMP synthase [Flavobacteria bacterium BBFL7]
          Length = 511

 Score = 43.0 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 51/189 (26%), Gaps = 22/189 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS           + +  +  + G   K E    L   + +      
Sbjct: 214 NDKVVLGLSGGVDSSVAAMLLHKAIGENLYCIFVNNGLLRKDEYTQVLKQYEGMG----- 268

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                          +  +  S+   +    + D  L    + GR  I +        + 
Sbjct: 269 -------------LNVKGVDASARFMDALAGLDDPELKRKAI-GRVFIEVFDDEAKEVQN 314

Query: 127 GITNIV--IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                   I     +          TI++      L     + +  PL  L K E  ++ 
Sbjct: 315 VTWLAQGTIYPDVIESVSATGGPSATIKSHHNVGGLPDFMKLKIVEPLRALFKDEVRRVG 374

Query: 185 QDIGGQDLV 193
             +G    +
Sbjct: 375 ASMGMAAEL 383


>gi|313607645|gb|EFR83912.1| argininosuccinate synthase [Listeria monocytogenes FSL F2-208]
          Length = 407

 Score = 43.0 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 4  IIKKAP-SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          + K A    +L +SGG D+S  + W ++    V     D G
Sbjct: 1  MFKMAKEKIVLAYSGGLDTSVAIQWLVESGYEVIACCLDVG 41


>gi|240139683|ref|YP_002964160.1| GMP synthetase (glutamine aminotransferase) [Methylobacterium
           extorquens AM1]
 gi|254562094|ref|YP_003069189.1| GMP synthetase [Methylobacterium extorquens DM4]
 gi|240009657|gb|ACS40883.1| GMP synthetase (glutamine aminotransferase) [Methylobacterium
           extorquens AM1]
 gi|254269372|emb|CAX25338.1| GMP synthetase (glutamine aminotransferase) [Methylobacterium
           extorquens DM4]
          Length = 521

 Score = 43.0 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 54/185 (29%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS       +   D++  +  D+G     E +  + + +        
Sbjct: 223 KEKVICGLSGGVDSSVAAVLIHEAIGDQLTCVFVDHGLMRLGEGDEVVRLFR-------- 274

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + + +PL  +                +        +              A  L
Sbjct: 275 ------DHYNIPLVHVQAQDLFIGALEGVDDPEVKRKTIGRLFIDVFEAEAGKIGGAAFL 328

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+    +      TI++      L    ++ +  PL  L K E   L ++
Sbjct: 329 AQGTLYPDVIESV--SFSGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRLLGKE 386

Query: 187 IGGQD 191
           +G  +
Sbjct: 387 LGLPE 391


>gi|254521778|ref|ZP_05133833.1| glutamine amidotransferase [Stenotrophomonas sp. SKA14]
 gi|219719369|gb|EED37894.1| glutamine amidotransferase [Stenotrophomonas sp. SKA14]
          Length = 521

 Score = 43.0 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 49/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       +++  +  D G     E +              +   
Sbjct: 226 VILGLSGGVDSSVVAALLHKAIGEKLTCVFVDTGLLRWQEGD--------------QVMA 271

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E   + +  +                +        +              A  L   
Sbjct: 272 MFAEHMGVKVVRVNAADRYFAALEGVSDPEAKRKIIGNLFVEIFDEESNKLKNAKWLAQG 331

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S     +   I++      L     + +  PL  L K E  +L  ++G 
Sbjct: 332 TIYPDVIESAGS--KTGKAHVIKSHHNVGGLPEHMKLGLVEPLRELFKDEVRRLGVELGL 389

Query: 190 Q 190
            
Sbjct: 390 P 390


>gi|190574033|ref|YP_001971878.1| GMP synthase [Stenotrophomonas maltophilia K279a]
 gi|226739746|sp|B2FNS1|GUAA_STRMK RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|190011955|emb|CAQ45577.1| putative GMP synthase (glutamine-hydrolyzing) [Stenotrophomonas
           maltophilia K279a]
          Length = 521

 Score = 43.0 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 49/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       +++  +  D G     E +              +   
Sbjct: 226 VILGLSGGVDSSVVAALLHKAIGEKLTCVFVDTGLLRWQEGD--------------QVMA 271

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E   + +  +                +        +              A  L   
Sbjct: 272 MFAEHMGVKVVRVNAADRYFAALEGVSDPEAKRKIIGNLFVEIFDEESNKLKNAKWLAQG 331

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S     +   I++      L     + +  PL  L K E  +L  ++G 
Sbjct: 332 TIYPDVIESAGS--KTGKAHVIKSHHNVGGLPEHMKLGLVEPLRELFKDEVRRLGVELGL 389

Query: 190 Q 190
            
Sbjct: 390 P 390


>gi|186499124|ref|NP_001077875.2| asparagine synthase (glutamine-hydrolyzing) [Arabidopsis thaliana]
 gi|330250639|gb|AEC05733.1| Asparagine synthase-like protein [Arabidopsis thaliana]
          Length = 610

 Score = 43.0 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 61/198 (30%), Gaps = 15/198 (7%)

Query: 9   PSAL---LLFSGGQDSSTCLSWA---LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
             A+   +LFSGG DS    +     LD    V+ L+  +   N  +        K++ +
Sbjct: 321 KEAVPVAVLFSGGLDSMILAALLHQCLDPKYEVDLLNVSFDGPNAPDRISAKAGIKELKK 380

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           + P  +  L E     L+ LG  +     + +++    +   +  +     +       +
Sbjct: 381 IAPFRRWKLVEIDA-DLSKLGFETK----RVMSLINPADTYMDLNIGTALWLAARGDGWI 435

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK---KYE 179
               G  ++        Y            A E     G       +   + L    K +
Sbjct: 436 HEDNGNPSVEENNQRVKYKSDARILLVGAGADEQCAGYGRHRTKYRNGSWVALDQEMKLD 495

Query: 180 TWK-LAQDIGGQDLVNLI 196
             +   +++G  D     
Sbjct: 496 MQRIWKRNLGRDDRCIAD 513


>gi|163852348|ref|YP_001640391.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Methylobacterium extorquens PA1]
 gi|163663953|gb|ABY31320.1| GMP synthase, large subunit [Methylobacterium extorquens PA1]
          Length = 521

 Score = 43.0 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 54/185 (29%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS       +   D++  +  D+G     E +  + + +        
Sbjct: 223 KEKVICGLSGGVDSSVAAVLIHEAIGDQLTCVFVDHGLMRLGEGDEVVRLFR-------- 274

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + + +PL  +                +        +              A  L
Sbjct: 275 ------DHYNIPLVHVQAQDLFIGALEGVDDPEVKRKTIGRLFIDVFEAEAGKIGGAAFL 328

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+    +      TI++      L    ++ +  PL  L K E   L ++
Sbjct: 329 AQGTLYPDVIESV--SFSGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRLLGKE 386

Query: 187 IGGQD 191
           +G  +
Sbjct: 387 LGLPE 391


>gi|194365449|ref|YP_002028059.1| GMP synthase [Stenotrophomonas maltophilia R551-3]
 gi|226739745|sp|B4SSX7|GUAA_STRM5 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|194348253|gb|ACF51376.1| GMP synthase, large subunit [Stenotrophomonas maltophilia R551-3]
          Length = 521

 Score = 43.0 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 49/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       +++  +  D G     E +              +   
Sbjct: 226 VILGLSGGVDSSVVAALLHKAIGEKLTCVFVDTGLLRWQEGD--------------QVMA 271

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E   + +  +                +        +              A  L   
Sbjct: 272 MFAEHMGVKVVRVNAADRYFAALEGVSDPEAKRKIIGNLFVEIFDEESNKLKNAKWLAQG 331

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S     +   I++      L     + +  PL  L K E  +L  ++G 
Sbjct: 332 TIYPDVIESAGS--KTGKAHVIKSHHNVGGLPEHMKLGLVEPLRELFKDEVRRLGVELGL 389

Query: 190 Q 190
            
Sbjct: 390 P 390


>gi|119720443|ref|YP_920938.1| hypothetical protein Tpen_1539 [Thermofilum pendens Hrk 5]
 gi|119525563|gb|ABL78935.1| conserved hypothetical protein [Thermofilum pendens Hrk 5]
          Length = 484

 Score = 43.0 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 17/219 (7%), Positives = 49/219 (22%), Gaps = 11/219 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              ++ SGG++S        +    V     +   R+            +      +   
Sbjct: 151 KCGVMSSGGKESLFAYGLLREAGCEVYPFFLNEAGRHWWTALTAYRELSRRDPNTRRVWS 210

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL----AYR 125
           ++          +  +  +   KN  +          ++     + L +           
Sbjct: 211 NVDRLFAFIEKNMKIVVPNYWRKNREIYPVRLFWYAHYILSFLPLALKYGVGNIVMGNEF 270

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
              + +        +      +        T         +   +PL  +      ++  
Sbjct: 271 DDPSGLTFEYKGIRHYYATYDQSLDFDVYMTRYFEERGLGIKQWSPLRPVTPITILRI-- 328

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPAC 224
                D    +     +C+             C +C  C
Sbjct: 329 ---LFDRYPDLAPLVTSCHS--THVENGVVKPCGTCYKC 362


>gi|88858305|ref|ZP_01132947.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Pseudoalteromonas tunicata D2]
 gi|88819922|gb|EAR29735.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Pseudoalteromonas tunicata D2]
          Length = 525

 Score = 43.0 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 50/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS            ++  +  D G     E +              +  D
Sbjct: 230 VILGLSGGVDSSVVAMLLHRAIGSKLTCVFVDNGLLRLNEGQ--------------QVMD 275

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+   L +  +   +            +                       A  LG  
Sbjct: 276 MFGDHFGLNIIKVDAEAQFLADLAGLSDPEAKRKAIGHTFIDIFDAESKKLKNAKWLGQG 335

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S         I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 336 TIYPDVIESAASATGKAHV--IKSHHNVGGLPDDMEMGLVEPLRELFKDEVRKIGLELGL 393

Query: 190 Q 190
            
Sbjct: 394 P 394


>gi|332638407|ref|ZP_08417270.1| argininosuccinate synthase [Weissella cibaria KACC 11862]
          Length = 407

 Score = 43.0 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L +SGG D+S  + W  ++   V  +  D GQ +  +L+       ++      
Sbjct: 1  MQEKLVLAYSGGLDTSVAIPWLKEKRYAVTAVVLDVGQ-HGKDLDFIKAKALQVGAEASI 59

Query: 67 WKD 69
            D
Sbjct: 60 LLD 62


>gi|330954571|gb|EGH54831.1| tRNA-specific 2-thiouridylase MnmA [Pseudomonas syringae Cit 7]
          Length = 357

 Score = 43.0 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 45/177 (25%), Gaps = 10/177 (5%)

Query: 17  GGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHI 76
           GG DSS      +++  +VE L     + +     C    R+ + +          + H 
Sbjct: 1   GGVDSSVSAVLLMEQGYQVEGLFMKNWEEDDGTEYC--TAREDLADAQAVCDKIGIKLHT 58

Query: 77  LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVC 136
                  +   +     +             +  R  I        A  LG   I  G  
Sbjct: 59  --ANFAAEYWDNVFEHFLEEYKAGRTPNPDILCNRE-IKFKAFLDYALMLGADLIATGHY 115

Query: 137 ETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                                       +G E       P+  L+K E   +A+  G
Sbjct: 116 VRRRDIDGRTELLKGLDPNKDQSYFLHAVGGEQIARTLFPVGELEKPEVRAIAEKHG 172


>gi|260911822|ref|ZP_05918389.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
          [Prevotella sp. oral taxon 472 str. F0295]
 gi|260634033|gb|EEX52156.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
          [Prevotella sp. oral taxon 472 str. F0295]
          Length = 461

 Score = 43.0 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR 45
          D++  +   L+  SGG DS       L    +VE +  ++  R
Sbjct: 16 DLLSPSGRYLVALSGGADSVALFRILLRLDYKVEAVHCNFKLR 58


>gi|262202734|ref|YP_003273942.1| argininosuccinate synthase [Gordonia bronchialis DSM 43247]
 gi|262086081|gb|ACY22049.1| argininosuccinate synthase [Gordonia bronchialis DSM 43247]
          Length = 399

 Score = 43.0 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
           A   +L +SGG D+S  +SW        V  ++ D GQ  +     R     
Sbjct: 1  MAERVVLAYSGGLDTSVAISWIQKETGKEVVAVALDLGQGGEDMDVVRQRALD 53


>gi|255573621|ref|XP_002527733.1| GMP synthase, putative [Ricinus communis]
 gi|223532874|gb|EEF34646.1| GMP synthase, putative [Ricinus communis]
          Length = 353

 Score = 43.0 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 54/182 (29%), Gaps = 9/182 (4%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+   +       DR+  +  D G    +E E  +   ++          
Sbjct: 49  VICALSGGVDSTVAATLVHKAIGDRLHCVFVDNGLLRYMERERVMETFER--------DL 100

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            L    +             +   +  KI      + F    + +        AY +  T
Sbjct: 101 HLPVTCVDASEQFLSKLKGVVDPEMKRKIIGKEFISIFDAFAHDLEQKLGKKPAYLVQGT 160

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                +      G       TI++      L  +  + +  PL  L K E  +L + +  
Sbjct: 161 LYPDVIESCPPPGSGRTHSHTIKSHHNVGGLPKDMKLKLIEPLKLLFKDEVRQLGRILYV 220

Query: 190 QD 191
            +
Sbjct: 221 PE 222


>gi|224010034|ref|XP_002293975.1| tRNA-methyltransferase [Thalassiosira pseudonana CCMP1335]
 gi|220970647|gb|EED88984.1| tRNA-methyltransferase [Thalassiosira pseudonana CCMP1335]
          Length = 392

 Score = 43.0 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
          + P+  +L SGG DSS  +   L +   V    
Sbjct: 9  RKPTVAMLLSGGVDSSVAMHLLLRQNYNVTAFY 41


>gi|212696912|ref|ZP_03305040.1| hypothetical protein ANHYDRO_01475 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676202|gb|EEB35809.1| hypothetical protein ANHYDRO_01475 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 369

 Score = 43.0 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 49/177 (27%), Gaps = 10/177 (5%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS       +    V  +          E E  +C  +   E   K  + +G  
Sbjct: 15  VSGGVDSSVAALLLKEEGYDVSGIFMKNW---DEEDENGVCTAEVDYEDAVKVCNQIGIP 71

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
           +           +  +      + +    PN  +     I        A  LG   +  G
Sbjct: 72  Y--YSINFEKEYYDRVFSYFLDEYKKGRTPNPDIMCNKEIKFKAFLDYAKDLGADYLATG 129

Query: 135 VCETDYSGY---PDCRHDTIRAIETAI--NLGMESHVTVHTPLMWLKKYETWKLAQD 186
                          R       +T     L  +    V  P+  L K E  K+A++
Sbjct: 130 HYARVDREDGETKMLRGIDSNKDQTYFLSQLSQDQIKDVLFPVGNLDKKEVRKIAKE 186


>gi|146281820|ref|YP_001171973.1| asparagine synthetase [Pseudomonas stutzeri A1501]
 gi|145570025|gb|ABP79131.1| asparagine synthetase [Pseudomonas stutzeri A1501]
 gi|327480057|gb|AEA83367.1| asparagine synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 590

 Score = 43.0 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 26/83 (31%), Gaps = 9/83 (10%)

Query: 1   MNDIIKKAPSALL----LFSGGQDSSTCLSWALDRFDRVETLSF-----DYGQRNKVELE 51
           M + +     A +    L SGG DSS  +    +       L+F     D G     E +
Sbjct: 249 MREAVAIRQRAAVDVGVLLSGGVDSSLLVGLLREAGVDDNLLTFSIGFEDAGGERGDEFK 308

Query: 52  CRLCVRKKIVELMPKWKDSLGED 74
               + K       + +    E 
Sbjct: 309 YSDIIAKHYNTRHHQLRIQEKEI 331


>gi|56696977|ref|YP_167339.1| GMP synthase [Ruegeria pomeroyi DSS-3]
 gi|81349738|sp|Q5LRL6|GUAA_SILPO RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|56678714|gb|AAV95380.1| GMP synthase [Ruegeria pomeroyi DSS-3]
          Length = 519

 Score = 43.0 bits (99), Expect = 0.040,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 15/36 (41%), Gaps = 1/36 (2%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
              +   SGG DSS       +   D++  +  D+G
Sbjct: 222 KKVICGLSGGVDSSVAAILIHEAIGDQLTCVFVDHG 257


>gi|315230856|ref|YP_004071292.1| ATPase [Thermococcus barophilus MP]
 gi|315183884|gb|ADT84069.1| ATPase [Thermococcus barophilus MP]
          Length = 201

 Score = 43.0 bits (99), Expect = 0.041,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 4/69 (5%)

Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYG----QRNKVELECRLCVRKKIVELMPKWKD 69
          L+SGG+DSS            V+ ++  +G     +   E   RL    ++V L  +  +
Sbjct: 6  LYSGGKDSSLAAWILQKLGYEVKLVTISFGLLDNWKYAKETADRLGFNHEVVVLGREILE 65

Query: 70 SLGEDHILP 78
             E  I  
Sbjct: 66 EAAEMCIRD 74


>gi|297180161|gb|ADI16383.1| argininosuccinate synthase [uncultured bacterium HF130_12L15]
          Length = 408

 Score = 43.0 bits (99), Expect = 0.041,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 31/83 (37%), Gaps = 6/83 (7%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
          M    K     +L +SGG D+S  L W        V T + D GQ    +LE      + 
Sbjct: 1  MTKW-KDVKKVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQG-VDDLEPARRKAEM 58

Query: 60 IVE---LMPKWKDSLGEDHILPL 79
          +      +   ++    D + P+
Sbjct: 59 MGAKEIYVEDVREEFVSDFVFPM 81


>gi|323525093|ref|YP_004227246.1| Sulfate adenylyltransferase [Burkholderia sp. CCGE1001]
 gi|323382095|gb|ADX54186.1| Sulfate adenylyltransferase [Burkholderia sp. CCGE1001]
          Length = 320

 Score = 43.0 bits (99), Expect = 0.041,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 53/195 (27%), Gaps = 19/195 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF------DRVET---LSFDYGQRNKVELE 51
           + +++ +     LLFSGG+DS   L+ A+  F        V     +  D G      ++
Sbjct: 34  LRELVAECSKPALLFSGGKDSVVVLALAMKAFGIGANRKTVLPFPLVHIDTGHNYDEVID 93

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
            R    K+I          L   H+      G +     T +         L      G 
Sbjct: 94  FRDRRAKEIGA-------ELVVGHVEDSIKRGTVRLRRETDSRNAAQAVTLLETIEQHGF 146

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
             +                I     E         R +        ++ G    V    P
Sbjct: 147 TALIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHNGEHLRV---FP 203

Query: 172 LMWLKKYETWKLAQD 186
           +    + + W+    
Sbjct: 204 ISNWTELDVWQYIAR 218


>gi|262066732|ref|ZP_06026344.1| GMP synthase [Fusobacterium periodonticum ATCC 33693]
 gi|291379531|gb|EFE87049.1| GMP synthase [Fusobacterium periodonticum ATCC 33693]
          Length = 512

 Score = 43.0 bits (99), Expect = 0.041,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 54/187 (28%), Gaps = 18/187 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +        ++  +  D G    +  +    V +   +    
Sbjct: 215 NKQVILGLSGGVDSSVAAALINKAIGRQLTCIFVDTG---LLRKDEAKQVMEVYAKNFDM 271

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +  +      + G     +  K +  +  +                      A  L
Sbjct: 272 NIKCVNAEERFLTKLAGVTDPETKRKIIGKEFVEVFNEE-----------AKKIEGAEFL 320

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+     P      I++      L  +    +  PL  L K E  K+ ++
Sbjct: 321 AQGTIYPDVIESVSVKGPSVT---IKSHHNVGGLPEDLKFELLEPLRELFKDEVRKVGRE 377

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 378 LGIPDYM 384


>gi|255693367|ref|ZP_05417042.1| GMP synthase [Bacteroides finegoldii DSM 17565]
 gi|260620844|gb|EEX43715.1| GMP synthase [Bacteroides finegoldii DSM 17565]
          Length = 507

 Score = 43.0 bits (99), Expect = 0.041,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 53/187 (28%), Gaps = 21/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D+G   K              E     
Sbjct: 214 DKVVLGLSGGVDSSVAAVLLNKAIGKNLTCIFVDHGMLRK-------------NEFKNVM 260

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           KD       +      +   S L      + +   +   F+   ++              
Sbjct: 261 KDYECLGLNVIGVDASEKFFSELAGVTEPEGKRKIIGKGFIDVFDVEA-------HKIKD 313

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G    D           I++      L  + ++ +  PL  L K E  ++ +++
Sbjct: 314 VKWLAQGTIYPDCIESLSITGTVIKSHHNVGGLPEKMNLKLCEPLRLLFKDEVRRVGREL 373

Query: 188 GGQDLVN 194
           G  + + 
Sbjct: 374 GMPEHLI 380


>gi|329957958|ref|ZP_08298390.1| asparagine synthase [Bacteroides clarus YIT 12056]
 gi|328522107|gb|EGF49223.1| asparagine synthase [Bacteroides clarus YIT 12056]
          Length = 569

 Score = 42.6 bits (98), Expect = 0.041,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 45/187 (24%), Gaps = 14/187 (7%)

Query: 13  LLFSGGQDSSTCLSWALD-RFDRVET----------LS-FDYGQRNKVELECRLCVRKKI 60
           +L SGG DSS   + A      R+ET          L  F  G +   +L     V + I
Sbjct: 245 VLLSGGLDSSVISAIAKKYAGKRIETDNKADAWWPQLHSFAVGLKGAPDLIKAREVAQYI 304

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  +      ++ +  +  +     +     V        L          + L    
Sbjct: 305 GTIHHEIN-YTIQEGLDAIRDVIYFIETYDVTTVRASTPMYLLARVIKSMGIKMVLSGEG 363

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
                 G                   R  +   +   +              +     E 
Sbjct: 364 AD-EVFGGYLYFHKAPTPQAFHEETVRKLSKLYLYDCLRANKSLAAWGVEGRVPFLDKEF 422

Query: 181 WKLAQDI 187
             +A  +
Sbjct: 423 LDVAMRL 429


>gi|296112324|ref|YP_003626262.1| sulfate adenylate transferase subunit 2 [Moraxella catarrhalis RH4]
 gi|295920018|gb|ADG60369.1| sulfate adenylate transferase subunit 2 [Moraxella catarrhalis RH4]
 gi|326561835|gb|EGE12170.1| sulfate adenylyltransferase subunit 2 [Moraxella catarrhalis 7169]
 gi|326563381|gb|EGE13646.1| sulfate adenylyltransferase subunit 2 [Moraxella catarrhalis
           12P80B1]
 gi|326565922|gb|EGE16083.1| sulfate adenylyltransferase subunit 2 [Moraxella catarrhalis
           103P14B1]
 gi|326568944|gb|EGE19013.1| sulfate adenylyltransferase subunit 2 [Moraxella catarrhalis BC1]
 gi|326569242|gb|EGE19303.1| sulfate adenylyltransferase subunit 2 [Moraxella catarrhalis BC7]
 gi|326571916|gb|EGE21921.1| sulfate adenylyltransferase subunit 2 [Moraxella catarrhalis BC8]
 gi|326575428|gb|EGE25353.1| sulfate adenylyltransferase subunit 2 [Moraxella catarrhalis
           101P30B1]
 gi|326576484|gb|EGE26392.1| sulfate adenylyltransferase subunit 2 [Moraxella catarrhalis CO72]
 gi|326577955|gb|EGE27819.1| sulfate adenylyltransferase subunit 2 [Moraxella catarrhalis O35E]
          Length = 307

 Score = 42.6 bits (98), Expect = 0.041,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 45/182 (24%), Gaps = 18/182 (9%)

Query: 13  LLFSGGQDSSTCLSWALD----RFDRVE----TLSFDYGQRNKVELECRLCVRKKIVELM 64
           LLFSGG+DS   L+ A      +   V      +  D G      +E R    K +    
Sbjct: 34  LLFSGGKDSVVLLALARKAFAIKGRDVALPFPLVHIDTGHNYPEVIEFRDAQVKTLN--- 90

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L   H+      G +     T +         L        + +          
Sbjct: 91  ----LRLVVGHVEDSIAKGTVVLRKETDSRNGAQAVTLLETIEAYQFDALMGGARRDEEK 146

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                 I     E         R +         + G    V    P+    + + W+  
Sbjct: 147 ARAKERIFSFRDEFGQWDPKAQRPELWSLYNAKHHQGENMRV---FPISNWTELDIWQYI 203

Query: 185 QD 186
             
Sbjct: 204 AR 205


>gi|291521316|emb|CBK79609.1| conserved hypothetical protein TIGR00268 [Coprococcus catus GD/7]
          Length = 269

 Score = 42.6 bits (98), Expect = 0.041,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 4/59 (6%)

Query: 13 LLFSGGQDSSTCL----SWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
          + FSGG DSS  L      A     +V  ++F+     K +L     V K+   +    
Sbjct: 21 VAFSGGVDSSVILRAACEAAAANGKKVYAVTFETKLHPKADLPQAQKVAKEAGAIHHVI 79


>gi|190345978|gb|EDK37960.2| hypothetical protein PGUG_02058 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 471

 Score = 42.6 bits (98), Expect = 0.041,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 60/187 (32%), Gaps = 20/187 (10%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRV-------ETLSFDYGQRNKVELECRLCVR 57
           +K      +  SGG DS  CL++ L ++ +V        +++ D+G R+  E+E      
Sbjct: 20  VKAPRRLAIALSGGVDSM-CLAYLLSQYKQVYEPSLELHSITIDHGYRSDSEIE-----A 73

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           +K+ +++  W        +  ++ L    + +   N     +           R      
Sbjct: 74  QKVAQVVQNWG------ILPSVSRLKYSCNPAKISNFEEVARTMRYAEFERFCRGNNIEG 127

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                     I    I     + S +          +  A N   E  + +  PL+   K
Sbjct: 128 LLVAHNLDDQIET-FIQRLRQNSSIFGLAGLKRATTLPVATNEPNERPIPLFRPLLQFPK 186

Query: 178 YETWKLA 184
            E     
Sbjct: 187 SELISTC 193


>gi|146420868|ref|XP_001486387.1| hypothetical protein PGUG_02058 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 471

 Score = 42.6 bits (98), Expect = 0.041,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 60/187 (32%), Gaps = 20/187 (10%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRV-------ETLSFDYGQRNKVELECRLCVR 57
           +K      +  SGG DS  CL++ L ++ +V        +++ D+G R+  E+E      
Sbjct: 20  VKAPRRLAIALSGGVDSM-CLAYLLSQYKQVYEPSLELHSITIDHGYRSDSEIE-----A 73

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           +K+ +++  W        +  ++ L    + +   N     +           R      
Sbjct: 74  QKVAQVVQNWG------ILPSVSRLKYSCNPAKISNFEEVARTMRYAEFERFCRGNNIEG 127

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                     I    I     + S +          +  A N   E  + +  PL+   K
Sbjct: 128 LLVAHNLDDQIET-FIQRLRQNSSIFGLAGLKRATTLPVATNEPNERPIPLFRPLLQFPK 186

Query: 178 YETWKLA 184
            E     
Sbjct: 187 SELISTC 193


>gi|126642474|ref|YP_001085458.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Acinetobacter baumannii ATCC 17978]
 gi|126388358|gb|ABO12856.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Acinetobacter baumannii ATCC 17978]
          Length = 64

 Score = 42.6 bits (98), Expect = 0.041,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
               ++  SGG DSS   +  L +  +VE L  
Sbjct: 1  MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGLFM 34


>gi|119936439|gb|ABM06127.1| asparagine synthetase [Bos taurus]
          Length = 512

 Score = 42.6 bits (98), Expect = 0.041,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 34/127 (26%), Gaps = 4/127 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRV---ETL-SFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            L SGG DSS   +  L +         L +F  G  +  +L     V   I     +  
Sbjct: 255 CLLSGGLDSSLVAATLLKQLKEAQVQYPLQTFAIGMEDSPDLLAARKVANHIGSEHHEVL 314

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  E   +   ++  +    +T   A                +++      +     G 
Sbjct: 315 FNSEEGIQVLDEVIFSLETYDITTVRASVGMYLISKYIRKNTDSVVIFSGEGSDELTQGY 374

Query: 129 TNIVIGV 135
                  
Sbjct: 375 IYFHKAP 381


>gi|73663631|ref|YP_302412.1| GMP synthase [Staphylococcus saprophyticus subsp. saprophyticus
           ATCC 15305]
 gi|91206832|sp|Q49UU9|GUAA_STAS1 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|72496146|dbj|BAE19467.1| GMP synthase [Staphylococcus saprophyticus subsp. saprophyticus
           ATCC 15305]
          Length = 513

 Score = 42.6 bits (98), Expect = 0.041,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 59/186 (31%), Gaps = 22/186 (11%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS           D++  +  D+G   K E +    V ++  E      
Sbjct: 220 KVLCAMSGGVDSSVVAVLLHKAIGDQLTCIFVDHGLLRKGEGDM---VMEQFGE------ 270

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL-G 127
                          +I      +    K+Q  + P          F+      A +L G
Sbjct: 271 -----------GFNMNIIRVDAQERFMSKLQGVSDPEQKRKIIGNEFIYVFDDEASKLKG 319

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  P+  L K E  +L  ++
Sbjct: 320 VDFLAQGTLYTDVIESGTKTAQTIKSHHNVGGLPEDMEFQLIEPINTLFKDEVRELGIEL 379

Query: 188 GGQDLV 193
           G  + +
Sbjct: 380 GIPEHL 385


>gi|56708497|ref|YP_170393.1| asparagine synthase [Francisella tularensis subsp. tularensis SCHU
           S4]
 gi|110670968|ref|YP_667525.1| asparagine synthase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|134301500|ref|YP_001121468.1| asparagine synthase (glutamine-hydrolyzing) [Francisella tularensis
           subsp. tularensis WY96-3418]
 gi|224457661|ref|ZP_03666134.1| asparagine synthase (glutamine-hydrolyzing) [Francisella tularensis
           subsp. tularensis MA00-2987]
 gi|254371123|ref|ZP_04987125.1| asparagine synthase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254875345|ref|ZP_05248055.1| wbtH, asparagine synthase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|45434710|gb|AAS60272.1| glutamine amidotransferase [Francisella tularensis subsp.
           tularensis]
 gi|56604989|emb|CAG46089.1| asparagine synthase [Francisella tularensis subsp. tularensis SCHU
           S4]
 gi|110321301|emb|CAL09472.1| asparagine synthase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|134049277|gb|ABO46348.1| asparagine synthase (glutamine-hydrolyzing) [Francisella tularensis
           subsp. tularensis WY96-3418]
 gi|151569363|gb|EDN35017.1| asparagine synthase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254841344|gb|EET19780.1| wbtH, asparagine synthase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282159707|gb|ADA79098.1| asparagine synthase (glutamine-hydrolyzing) [Francisella tularensis
           subsp. tularensis NE061598]
          Length = 628

 Score = 42.6 bits (98), Expect = 0.041,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 15  FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
            SGG DS+T ++       D++ T S  + Q+   E E    V K I 
Sbjct: 271 LSGGIDSTTVVALMQSMSKDKINTFSIGFNQKEYNEAEHARAVAKHIG 318


>gi|289577952|ref|YP_003476579.1| PP-loop domain protein [Thermoanaerobacter italicus Ab9]
 gi|289527665|gb|ADD02017.1| PP-loop domain protein [Thermoanaerobacter italicus Ab9]
          Length = 273

 Score = 42.6 bits (98), Expect = 0.041,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 45/151 (29%), Gaps = 27/151 (17%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCL---SWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           + + + K  +AL+ FSGG DS+         L   +R   ++       K EL+  + + 
Sbjct: 8   LQEYLSKLDNALIAFSGGVDSTFLAKVSYDVL--GNRALAVTVTSPIHAKSELKEAVELA 65

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           KKI               ++               ++    +    P             
Sbjct: 66  KKIG----------IPHLVVEFN------------DILEIEEFRKNPLNRCYICKFNLFS 103

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRH 148
               +A   G   I+ G    D S +   R 
Sbjct: 104 RFKAIAEEKGFKYILEGTNADDVSDFRPGRR 134


>gi|284030469|ref|YP_003380400.1| argininosuccinate synthase [Kribbella flavida DSM 17836]
 gi|283809762|gb|ADB31601.1| argininosuccinate synthase [Kribbella flavida DSM 17836]
          Length = 479

 Score = 42.6 bits (98), Expect = 0.041,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 3/72 (4%)

Query: 1  MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M+ +I   P      + FSGG D+S  ++W  D+     T + D GQ ++ ++       
Sbjct: 1  MSKVISSLPVGERVGIAFSGGLDTSVAVAWMRDKGAVPCTYTADIGQYDEPDIASVPGRA 60

Query: 58 KKIVELMPKWKD 69
          K     + +  D
Sbjct: 61 KAYGAEIARLVD 72


>gi|254501298|ref|ZP_05113449.1| GMP synthase, C-terminal domain protein [Labrenzia alexandrii
           DFL-11]
 gi|222437369|gb|EEE44048.1| GMP synthase, C-terminal domain protein [Labrenzia alexandrii
           DFL-11]
          Length = 524

 Score = 42.6 bits (98), Expect = 0.041,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 52/184 (28%), Gaps = 17/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS       +   D++  +  D+G    + L     V     +     
Sbjct: 227 KKVICGLSGGVDSSVAAVLIHEAIGDQLTCVFVDHG---LLRLNEAEEVVSMFRDNYN-- 281

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    +PL    +        +     +        +              A  L 
Sbjct: 282 ---------IPLIHADETDLFLGELDGQSDPETKRKIIGKLFIDVFQKHANEIEGAEFLA 332

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   V E+    +      TI++      L  +  + +  PL  L K E   L +++
Sbjct: 333 QGTLYPDVIESV--SFSGGPSVTIKSHHNVGGLPEKMGLKLVEPLRELFKDEVRALGREL 390

Query: 188 GGQD 191
           G  +
Sbjct: 391 GLPE 394


>gi|146312639|ref|YP_001177713.1| GMP synthase [Enterobacter sp. 638]
 gi|226738453|sp|A4WD82|GUAA_ENT38 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|145319515|gb|ABP61662.1| GMP synthase (glutamine-hydrolyzing) [Enterobacter sp. 638]
          Length = 525

 Score = 42.6 bits (98), Expect = 0.041,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 50/183 (27%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVMDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                  A  L     
Sbjct: 285 IVHVEGEERFLTALAGENDPEAKRKIIGRVFVEVFDE-------------QALRLEDVKW 331

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +    I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 332 LAQGTIYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLRELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|77165411|ref|YP_343936.1| hypothetical protein Noc_1944 [Nitrosococcus oceani ATCC 19707]
 gi|254433729|ref|ZP_05047237.1| hypothetical protein NOC27_660 [Nitrosococcus oceani AFC27]
 gi|76883725|gb|ABA58406.1| hypothetical protein Noc_1944 [Nitrosococcus oceani ATCC 19707]
 gi|207090062|gb|EDZ67333.1| hypothetical protein NOC27_660 [Nitrosococcus oceani AFC27]
          Length = 581

 Score = 42.6 bits (98), Expect = 0.041,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 19/47 (40%), Gaps = 2/47 (4%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
            S G DS T L++       V   +F  GQ    E+     + +++ 
Sbjct: 243 LSAGLDSRTALAYLQRAGVEVSFYTF--GQPGSTEVIGAQSIAQRVG 287


>gi|329924587|ref|ZP_08279632.1| GMP synthase (glutamine-hydrolyzing) [Paenibacillus sp. HGF5]
 gi|328940597|gb|EGG36918.1| GMP synthase (glutamine-hydrolyzing) [Paenibacillus sp. HGF5]
          Length = 309

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 17/46 (36%), Gaps = 1/46 (2%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELEC 52
               L   SGG DSS           D++  +  D+G   K E E 
Sbjct: 217 EKKVLCALSGGVDSSVVAMLIHKAIGDQLTCMFIDHGLLRKGEAES 262


>gi|326526129|dbj|BAJ93241.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 461

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 19/50 (38%), Gaps = 1/50 (2%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELEC 52
           ++      +   SGG DS+   +   +   DR+  +  D G     E E 
Sbjct: 231 MVGPDEHVICALSGGVDSTVAATLVHNAIGDRLHCVFVDNGLLRYKEQER 280


>gi|326524305|dbj|BAK00536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 542

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 19/50 (38%), Gaps = 1/50 (2%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELEC 52
           ++      +   SGG DS+   +   +   DR+  +  D G     E E 
Sbjct: 231 MVGPDEHVICALSGGVDSTVAATLVHNAIGDRLHCVFVDNGLLRYKEQER 280


>gi|326490716|dbj|BAJ90025.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1010

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 19/50 (38%), Gaps = 1/50 (2%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELEC 52
           ++      +   SGG DS+   +   +   DR+  +  D G     E E 
Sbjct: 231 MVGPDEHVICALSGGVDSTVAATLVHNAIGDRLHCVFVDNGLLRYKEQER 280


>gi|312137424|ref|YP_004004761.1| argininosuccinate synthase [Methanothermus fervidus DSM 2088]
 gi|311225143|gb|ADP77999.1| argininosuccinate synthase [Methanothermus fervidus DSM 2088]
          Length = 390

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 50/191 (26%), Gaps = 24/191 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             A+L FSGG D++ C+    +++   V T   D GQ  K +++    + KK        
Sbjct: 2   NKAVLAFSGGLDTTVCIKLLEEKYNMNVITACVDVGQD-KEDIKQAETIAKK-------- 52

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                + + +      D                             +       +A +  
Sbjct: 53  --YSYKHYTID---AKDEFVEEYVYRAIKANAIYEGYPLSTALARPLIAKKVVEIAEKEK 107

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I  G        +         +            +      + L + E  K A++ 
Sbjct: 108 ADVIAHGCTGKGNDQFRFESTIRAISDCK---------IVAPIRDLNLTREEEIKYAKEH 158

Query: 188 GGQDLVNLILE 198
           G +        
Sbjct: 159 GIEIPSGKKYS 169


>gi|301098561|ref|XP_002898373.1| asparagine synthetase domain-containing protein, putative
           [Phytophthora infestans T30-4]
 gi|262105144|gb|EEY63196.1| asparagine synthetase domain-containing protein, putative
           [Phytophthora infestans T30-4]
          Length = 544

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 35/127 (27%), Gaps = 10/127 (7%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWA-----LDRFDRVETLSFDYGQRNKVELECRLCVR 57
           D         +L SGG DS    + +      +    + T+ FD   R          + 
Sbjct: 166 DAASPPARVAVLLSGGLDSVVLAALSHFHAPKNEPVDLLTVCFDENSRFASPDRRAAELA 225

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
               EL   + +       + +        SS+ + V   +   +    F  G    FL 
Sbjct: 226 H--AELCGLFPERQWNFVKINVT---RAELSSVQQEVLTLMAPCDTHMDFNIGAAFWFLS 280

Query: 118 FAATLAY 124
                  
Sbjct: 281 RGRGELE 287


>gi|170767217|ref|ZP_02901670.1| GMP synthase (glutamine-hydrolyzing) [Escherichia albertii TW07627]
 gi|170123551|gb|EDS92482.1| GMP synthase (glutamine-hydrolyzing) [Escherichia albertii TW07627]
          Length = 525

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVMDMFGDRFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IIHVPAEDRFLSALAGEHDPEAKRKIIGRVFVEVFDEEALKVEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|108760981|ref|YP_631957.1| GMP synthase [Myxococcus xanthus DK 1622]
 gi|108464861|gb|ABF90046.1| GMP synthase [Myxococcus xanthus DK 1622]
          Length = 517

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 48/186 (25%), Gaps = 18/186 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +    +   SGG DSS            R++ +  D G               +  E   
Sbjct: 219 EHGRVICALSGGVDSSVAALLLHRAIGPRLQCIFVDNG-------------VLRQNERAQ 265

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                +   H+     L  +       +    + D       +    I     AA     
Sbjct: 266 VEALFVDRFHV----PLKTVDARQRFLDKLAGVTDPEKKRKIIGREFIAVFEEAARDVQD 321

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                      +   S        TI++      L     + +  PL  L K E   L +
Sbjct: 322 AEFLAQGTLYPDVIESVSYKGPSVTIKSHHNVGGLPETMKLKLVEPLRELFKDEVRALGR 381

Query: 186 DIGGQD 191
           ++G  D
Sbjct: 382 ELGLPD 387


>gi|331016383|gb|EGH96439.1| tRNA(Ile)-lysidine synthetase [Pseudomonas syringae pv.
          lachrymans str. M302278PT]
          Length = 445

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 21/64 (32%), Gaps = 7/64 (10%)

Query: 15 FSGGQDSSTCLSWALDRFDR-----VETLSFDYGQR--NKVELECRLCVRKKIVELMPKW 67
          FSGG DS+  L    +   R     +  +   +G +       E    V + +       
Sbjct: 32 FSGGLDSTVLLHLLAELAKRANLPALHAIHVHHGLQAIADAWPEHCRQVCQALGVAFESV 91

Query: 68 KDSL 71
          +  +
Sbjct: 92 RVKV 95


>gi|237800161|ref|ZP_04588622.1| tRNA(Ile)-lysidine synthetase [Pseudomonas syringae pv. oryzae
          str. 1_6]
 gi|331023018|gb|EGI03075.1| tRNA(Ile)-lysidine synthetase [Pseudomonas syringae pv. oryzae
          str. 1_6]
          Length = 445

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 20/64 (31%), Gaps = 7/64 (10%)

Query: 15 FSGGQDSSTCLSWAL-----DRFDRVETLSFDYGQRNK--VELECRLCVRKKIVELMPKW 67
          FSGG DS+  L         +    +  +   +G +       E    V + +     + 
Sbjct: 32 FSGGLDSTVLLHLLAELARSENLPALHAIHVHHGLQAAADAWPEHCRQVCQALGVPFEQV 91

Query: 68 KDSL 71
             +
Sbjct: 92 SVKV 95


>gi|289804178|ref|ZP_06534807.1| GMP synthase [Salmonella enterica subsp. enterica serovar Typhi
           str. AG3]
          Length = 299

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 25  DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVMDMFGDHFGLN 81

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 82  IVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 133

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 134 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 188

Query: 188 GGQ 190
           G  
Sbjct: 189 GLP 191


>gi|225677747|gb|EEH16031.1| GMP synthase [Paracoccidioides brasiliensis Pb03]
          Length = 658

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 54/196 (27%), Gaps = 13/196 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
             ++ +    +   SGG DS+       +   DR   +  D G          L + +  
Sbjct: 229 RKLVGEKGQVIGAVSGGVDSTVAAKLMKEAIGDRFHAVLVDNG---------VLRLNEAA 279

Query: 61  VELMPKWKDSLGEDHILPLA--ILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
           +      +       ++  +   LG +           K+  N     F      I    
Sbjct: 280 IVKETLTRHLGVNLTVVDASERFLGKLKGIKDDPERKRKVIGNTFIEVFQEEAKKIAAAA 339

Query: 119 AATLAYRLGITNIV-IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
             +         +      +   S        TI+       L    H+ +  PL  L K
Sbjct: 340 KGSHNEGEIEWLLQGTLYPDVIESISFKGPSATIKTHHNVGGLLEGMHLKLIEPLRELFK 399

Query: 178 YETWKLAQDIGGQDLV 193
            E  +L   +G  + +
Sbjct: 400 DEVRELGVQLGIPEEL 415


>gi|213648807|ref|ZP_03378860.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Salmonella enterica subsp. enterica serovar Typhi str.
           J185]
          Length = 451

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 154 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVMDMFGDHFGLN 210

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 211 IVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 262

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 263 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 317

Query: 188 GGQ 190
           G  
Sbjct: 318 GLP 320


>gi|200388214|ref|ZP_03214826.1| gmp synthase (glutamine-hydrolyzing) [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|199605312|gb|EDZ03857.1| gmp synthase (glutamine-hydrolyzing) [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
          Length = 525

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVMDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|161502333|ref|YP_001569445.1| GMP synthase [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|226739715|sp|A9MHM5|GUAA_SALAR RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|160863680|gb|ABX20303.1| hypothetical protein SARI_00366 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 525

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVMDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|90407118|ref|ZP_01215307.1| argininosuccinate synthase [Psychromonas sp. CNPT3]
 gi|90311840|gb|EAS39936.1| argininosuccinate synthase [Psychromonas sp. CNPT3]
          Length = 403

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 45/160 (28%), Gaps = 14/160 (8%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +K+    +L +SGG D+S  + W  +  +   V     D GQ ++          + +  
Sbjct: 1   MKQVKKVVLAYSGGLDTSAIIPWLKETYKGCEVIAFCADVGQGSQ----------ELLGL 50

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     E HI+ L    +     +  ++A                  I       L
Sbjct: 51  EEKALASGASECHIVDLKD--EFVADYIYPSIATNAIYEGAYLLGTAMARPIIAKAQVEL 108

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM 162
           A ++G   +  G                  A +  +    
Sbjct: 109 ALQVGADALCHGCTGKGNDQIRFESCFAALAPQLRVIAPW 148


>gi|59711245|ref|YP_204021.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Vibrio fischeri ES114]
 gi|75354446|sp|Q5E763|GUAA_VIBF1 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|59479346|gb|AAW85133.1| GMP synthetase (glutamine aminotransferase) [Vibrio fischeri ES114]
          Length = 517

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 50/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS     A     D++  +  D G     E                +  +
Sbjct: 222 VILGLSGGVDSSVVAMLAHRAIGDKLTCVFVDNGLLRLNE--------------ADQVME 267

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G    L +  +                +        V              A  L   
Sbjct: 268 MFGNKFGLNIVHVNAEQRFLDALEGESDPETKRKIIGHVFVDIFDEESKKLKNAKWLAQG 327

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S     +   I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 328 TIYPDVIESAAS--KTGKAHVIKSHHNVGGLPDDMEMGLVEPLRELFKDEVRKIGLELGL 385

Query: 190 Q 190
            
Sbjct: 386 P 386


>gi|28868757|ref|NP_791376.1| cell cycle protein mesJ [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|28851996|gb|AAO55071.1| cell cycle protein mesJ, putative [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 455

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 21/64 (32%), Gaps = 7/64 (10%)

Query: 15  FSGGQDSSTCLSWALDRFDR-----VETLSFDYGQR--NKVELECRLCVRKKIVELMPKW 67
           FSGG DS+  L    +   R     +  +   +G +       E    V + +       
Sbjct: 42  FSGGLDSTVLLHLLAELAKRANLPALHAIHVHHGLQAIADAWPEHCRQVCQALGVAFESV 101

Query: 68  KDSL 71
           +  +
Sbjct: 102 RVKV 105


>gi|61216635|sp|Q886M6|TILS_PSESM RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
          Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
          Full=tRNA(Ile)-lysidine synthetase
          Length = 445

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 21/64 (32%), Gaps = 7/64 (10%)

Query: 15 FSGGQDSSTCLSWALDRFDR-----VETLSFDYGQR--NKVELECRLCVRKKIVELMPKW 67
          FSGG DS+  L    +   R     +  +   +G +       E    V + +       
Sbjct: 32 FSGGLDSTVLLHLLAELAKRANLPALHAIHVHHGLQAIADAWPEHCRQVCQALGVAFESV 91

Query: 68 KDSL 71
          +  +
Sbjct: 92 RVKV 95


>gi|15679265|ref|NP_276382.1| argininosuccinate synthase [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|5915701|sp|O27322|ASSY_METTH RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|2622367|gb|AAB85743.1| argininosuccinate synthase [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 399

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 52/191 (27%), Gaps = 23/191 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L FSGG D+S C+    +++   V T   D GQ  + E+E    V K++       
Sbjct: 7   DKVVLAFSGGLDTSVCIKLLEEKYNMEVITACVDVGQ-PRDEIERPAMVAKELGNY---- 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                  + +                                    +       +A + G
Sbjct: 62  -----RHYTVD---ARREFAEDYIFPAIKANAVYEGYPLSTALARPLIAKKIVEVAEKEG 113

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            + I  G        +           E  I    +  V      + L + E  + A+  
Sbjct: 114 ASAIAHGCTGKGNDQFRF---------EAVIRSTTDLDVIAPIRDLNLTRTEEMEYARSC 164

Query: 188 GGQDLVNLILE 198
           G     + +  
Sbjct: 165 GIPLPSDKLYS 175


>gi|16761427|ref|NP_457044.1| GMP synthase [Salmonella enterica subsp. enterica serovar Typhi
           str. CT18]
 gi|29140876|ref|NP_804218.1| GMP synthase [Salmonella enterica subsp. enterica serovar Typhi
           str. Ty2]
 gi|167549472|ref|ZP_02343231.1| gmp synthase (glutamine-hydrolyzing) [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|168232074|ref|ZP_02657132.1| gmp synthase (glutamine-hydrolyzing) [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168243285|ref|ZP_02668217.1| gmp synthase (glutamine-hydrolyzing) [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168261453|ref|ZP_02683426.1| gmp synthase (glutamine-hydrolyzing) [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168817736|ref|ZP_02829736.1| gmp synthase (glutamine-hydrolyzing) [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194450983|ref|YP_002046570.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194470386|ref|ZP_03076370.1| gmp synthase (glutamine-hydrolyzing) [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|197247502|ref|YP_002147463.1| GMP synthase [Salmonella enterica subsp. enterica serovar Agona
           str. SL483]
 gi|198245648|ref|YP_002216575.1| GMP synthase [Salmonella enterica subsp. enterica serovar Dublin
           str. CT_02021853]
 gi|205353612|ref|YP_002227413.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|207857920|ref|YP_002244571.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|213160878|ref|ZP_03346588.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E00-7866]
 gi|213425340|ref|ZP_03358090.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E02-1180]
 gi|213622893|ref|ZP_03375676.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-2068]
 gi|213852551|ref|ZP_03382083.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Salmonella enterica subsp. enterica serovar Typhi str.
           M223]
 gi|238913647|ref|ZP_04657484.1| GMP synthase [Salmonella enterica subsp. enterica serovar Tennessee
           str. CDC07-0191]
 gi|289824931|ref|ZP_06544340.1| GMP synthase [Salmonella enterica subsp. enterica serovar Typhi
           str. E98-3139]
 gi|24211756|sp|Q8Z4Q3|GUAA_SALTI RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226739714|sp|B5F185|GUAA_SALA4 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226739716|sp|B5FR52|GUAA_SALDC RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226739717|sp|B5R569|GUAA_SALEP RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226739718|sp|B5RCX9|GUAA_SALG2 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226739719|sp|B4TD82|GUAA_SALHS RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|25293822|pir||AD0820 GMP synthase (glutamine-hydrolyzing) (EC 6.3.5.2) [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16503727|emb|CAD02712.1| GMP synthase (glutamine-hydrolyzing) [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29136501|gb|AAO68067.1| GMP synthase [Salmonella enterica subsp. enterica serovar Typhi
           str. Ty2]
 gi|194409287|gb|ACF69506.1| gmp synthase (glutamine-hydrolyzing) [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194456750|gb|EDX45589.1| gmp synthase (glutamine-hydrolyzing) [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|197211205|gb|ACH48602.1| GMP synthetase [Salmonella enterica subsp. enterica serovar Agona
           str. SL483]
 gi|197940164|gb|ACH77497.1| gmp synthase (glutamine-hydrolyzing) [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|205273393|emb|CAR38365.1| GMP synthase [glutamine-hydrolyzing] [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205325488|gb|EDZ13327.1| gmp synthase (glutamine-hydrolyzing) [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205333635|gb|EDZ20399.1| gmp synthase (glutamine-hydrolyzing) [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205337568|gb|EDZ24332.1| gmp synthase (glutamine-hydrolyzing) [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205344986|gb|EDZ31750.1| gmp synthase (glutamine-hydrolyzing) [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205349448|gb|EDZ36079.1| gmp synthase (glutamine-hydrolyzing) [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206709723|emb|CAR34073.1| GMP synthase [glutamine-hydrolyzing] [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|320087003|emb|CBY96772.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
 gi|322613748|gb|EFY10687.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322619509|gb|EFY16385.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322625014|gb|EFY21843.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322629543|gb|EFY26319.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322634026|gb|EFY30763.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322635536|gb|EFY32247.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322639889|gb|EFY36566.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 531954]
 gi|322644411|gb|EFY40952.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|322649136|gb|EFY45576.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322655225|gb|EFY51534.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322658272|gb|EFY54538.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322664273|gb|EFY60470.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322669440|gb|EFY65589.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322673167|gb|EFY69273.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322676559|gb|EFY72627.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322683309|gb|EFY79323.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|322685805|gb|EFY81798.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
 gi|323192519|gb|EFZ77748.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323199564|gb|EFZ84655.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323204661|gb|EFZ89659.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323208109|gb|EFZ93054.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323210167|gb|EFZ95068.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323217034|gb|EGA01756.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323219225|gb|EGA03721.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB102109-0047]
 gi|323225454|gb|EGA09685.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
 gi|323229277|gb|EGA13401.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323235408|gb|EGA19492.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323237406|gb|EGA21469.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323245160|gb|EGA29161.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323248863|gb|EGA32789.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323253151|gb|EGA36983.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323255384|gb|EGA39152.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323260592|gb|EGA44202.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323266368|gb|EGA49856.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323269801|gb|EGA53251.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
 gi|326624330|gb|EGE30675.1| GMP synthase [Salmonella enterica subsp. enterica serovar Dublin
           str. 3246]
 gi|326628711|gb|EGE35054.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9]
          Length = 525

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVMDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|84387649|ref|ZP_00990666.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Vibrio splendidus 12B01]
 gi|84377494|gb|EAP94360.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Vibrio splendidus 12B01]
          Length = 517

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 53/181 (29%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS     A     D++  +  D G     E E              +  D
Sbjct: 222 VILGLSGGVDSSVVAMLAHRAIGDKLTCVFVDNGLLRLNEGE--------------QVMD 267

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+   L +  +              + +        V              A  L   
Sbjct: 268 MFGDKFGLNIIKVDAEERFLNALEGEAEPEAKRKIIGHVFVDIFDEESKKLKNAKWLAQG 327

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S     +   I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 328 TIYPDVIESAAS--KTGKAHVIKSHHNVGGLPDDMEMGLVEPLRELFKDEVRKIGLELGL 385

Query: 190 Q 190
            
Sbjct: 386 P 386


>gi|326803273|ref|YP_004321091.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651304|gb|AEA01487.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Aerococcus urinae ACS-120-V-Col10a]
          Length = 516

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 51/186 (27%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V + +       
Sbjct: 222 KKVLLGLSGGVDSSVVGVLLQKAIGDQLTCIFVDHGLLRKGE---ADQVMETLGGKFGLN 278

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                        + G     S  K +  +                             G
Sbjct: 279 IIKADAQERFLGKLAGVSDPESKRKIIGHEFVAVFDDEAT----------------KLDG 322

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD         +TI++      L  +    +  PL  L K E   +  ++
Sbjct: 323 MDFLAQGTLYTDVIESGTETAETIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRAVGTEL 382

Query: 188 GGQDLV 193
           G  D +
Sbjct: 383 GMPDNI 388


>gi|320108278|ref|YP_004183868.1| GMP synthase large subunit [Terriglobus saanensis SP1PR4]
 gi|319926799|gb|ADV83874.1| GMP synthase, large subunit [Terriglobus saanensis SP1PR4]
          Length = 551

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 57/187 (30%), Gaps = 17/187 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLC-VRKKIVELMPKWK 68
           A+   SGG DSS           DR+  +  + G   K E       +R+K+        
Sbjct: 250 AICGLSGGVDSSVAAVLVQRAIGDRLTCIFVNNGVLRKDEFTKVQATMREKLG------- 302

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   +          S L      + +   +   F+   +       A  A    +
Sbjct: 303 ------LKVVAVDASKRFLSQLGGITDPETKRKIIGREFITVFDDEAAKILAAEASDSEV 356

Query: 129 TNIVIGVCETDY--SGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
             +V G    D   S        TI++      L     + +  PL  L K E  ++ +D
Sbjct: 357 AWLVQGTLYPDVIESSSVKGPSQTIKSHHNVGGLPENMKLKLIEPLRDLFKDEVRRIGRD 416

Query: 187 IGGQDLV 193
           +   D +
Sbjct: 417 LKMPDEI 423


>gi|302561616|ref|ZP_07313958.1| argininosuccinate synthase [Streptomyces griseoflavus Tu4000]
 gi|302479234|gb|EFL42327.1| argininosuccinate synthase [Streptomyces griseoflavus Tu4000]
          Length = 404

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 1/38 (2%)

Query: 8  APSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQ 44
              +L +SGG D S      A +    V  ++ D GQ
Sbjct: 9  TERVVLAYSGGLDTSVAIGWIAEETGAEVIAVAVDVGQ 46


>gi|302541222|ref|ZP_07293564.1| argininosuccinate synthase [Streptomyces hygroscopicus ATCC
          53653]
 gi|302458840|gb|EFL21933.1| argininosuccinate synthase [Streptomyces himastatinicus ATCC
          53653]
          Length = 405

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 1/38 (2%)

Query: 8  APSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQ 44
              +L +SGG D S      A +    V  ++ D GQ
Sbjct: 9  TERVVLAYSGGLDTSVAIGWIAEETGAEVIAVAVDVGQ 46


>gi|297569716|ref|YP_003691060.1| NAD+ synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296925631|gb|ADH86441.1| NAD+ synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 336

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 59/218 (27%), Gaps = 29/218 (13%)

Query: 11  ALLLFSGGQDSSTCLSWA-----------------------LDRFDRV-ETLSFDYGQRN 46
            ++  SGG DSS C + A                       L R  +V + L  DY   +
Sbjct: 39  VVVALSGGVDSSVCAALAVRALGAGKVYGLMLPERDSSPLSLKRGKQVADCLGIDYLVED 98

Query: 47  KVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT 106
                  L    +  E + +     G      +AI G    S    N+ ++     L   
Sbjct: 99  IGPTLDSLGCYLRRDEAIRRLFPEYGPGWKSKIAIAGGRDGSFNYFNLVVQTPGGELLEK 158

Query: 107 FVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV 166
            +P R  + +V A     R             +Y+                  +      
Sbjct: 159 RMPPREYLQIVAATNFKQRTRKMIEYFHADRLNYAVIGTPNRLEYD---QGFFVKNGDGA 215

Query: 167 TVHTPLMWLKKYET--WKLAQDIGGQDLVNLILEESHT 202
               P+  L K +         I  +        ++++
Sbjct: 216 ADLKPIAHLYKTQVYALASHLRIPEEISSAAPTTDTYS 253


>gi|294811631|ref|ZP_06770274.1| Argininosuccinate synthase [Streptomyces clavuligerus ATCC 27064]
 gi|294324230|gb|EFG05873.1| Argininosuccinate synthase [Streptomyces clavuligerus ATCC 27064]
          Length = 404

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 1/38 (2%)

Query: 8  APSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQ 44
              +L +SGG D S      A +    V  ++ D GQ
Sbjct: 9  TERVVLAYSGGLDTSVAIGWIAEETGAEVIAVAVDVGQ 46


>gi|291440707|ref|ZP_06580097.1| argininosuccinate synthase [Streptomyces ghanaensis ATCC 14672]
 gi|291343602|gb|EFE70558.1| argininosuccinate synthase [Streptomyces ghanaensis ATCC 14672]
          Length = 404

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 1/38 (2%)

Query: 8  APSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQ 44
              +L +SGG D S      A +    V  ++ D GQ
Sbjct: 9  TERVVLAYSGGLDTSVAIGWIAEETGAEVIAVAVDVGQ 46


>gi|288923775|ref|ZP_06417866.1| argininosuccinate synthase [Frankia sp. EUN1f]
 gi|288344875|gb|EFC79313.1| argininosuccinate synthase [Frankia sp. EUN1f]
          Length = 400

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 17/51 (33%), Gaps = 1/51 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
               +L +SGG D S        +    V  L+ D GQ  +     R   
Sbjct: 1  MTERVVLAYSGGLDTSVAIGWIGAETGAEVIALAVDVGQGGEDLEAIRQRA 51


>gi|284163472|ref|YP_003401751.1| tRNA methyl transferase-like protein [Haloterrigena turkmenica DSM
           5511]
 gi|284013127|gb|ADB59078.1| tRNA methyl transferase-like protein [Haloterrigena turkmenica DSM
           5511]
          Length = 313

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 30/114 (26%), Gaps = 11/114 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            L+ FSGG DSS   + A D   +     +       + ELE    V  +I         
Sbjct: 21  VLVAFSGGVDSSVVAALAHDALGEDAVACTAKSETLPEAELEDARRVADEIG-------- 72

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                 I+  + L          +     +   L       R +          
Sbjct: 73  --IRHEIVSFSELESDDFVENDDDRCYHCRTMRLGEMLETAREVGVETVCDGTN 124


>gi|265762798|ref|ZP_06091366.1| tRNA(Ile)-lysidine synthase [Bacteroides sp. 2_1_16]
 gi|263255406|gb|EEZ26752.1| tRNA(Ile)-lysidine synthase [Bacteroides sp. 2_1_16]
          Length = 435

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 18/62 (29%), Gaps = 1/62 (1%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L+  SGG DS   L   L      E    ++  R   E +      +++       
Sbjct: 19 NDKVLVTLSGGADSVALLRLLLSMGYTCEAAHCNFHLR-DKESDRDEAFVRRLCHESGVL 77

Query: 68 KD 69
            
Sbjct: 78 LH 79


>gi|253563316|ref|ZP_04840773.1| tRNA(Ile)-lysidine synthase [Bacteroides sp. 3_2_5]
 gi|251947092|gb|EES87374.1| tRNA(Ile)-lysidine synthase [Bacteroides sp. 3_2_5]
          Length = 435

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 18/62 (29%), Gaps = 1/62 (1%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L+  SGG DS   L   L      E    ++  R   E +      +++       
Sbjct: 19 NDKVLVTLSGGADSVALLRLLLSMGYTCEAAHCNFHLR-DKESDRDEAFVRRLCHESGVL 77

Query: 68 KD 69
            
Sbjct: 78 LH 79


>gi|289581720|ref|YP_003480186.1| asparagine synthase [Natrialba magadii ATCC 43099]
 gi|289531273|gb|ADD05624.1| asparagine synthase [Natrialba magadii ATCC 43099]
          Length = 317

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 31/112 (27%), Gaps = 11/112 (9%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
            D +      L+ FSGG DSS   + A D   D     +       + ELE    V  +I
Sbjct: 50  RDELATHDGVLVAFSGGVDSSVVAALAHDALGDDAVACTAKSETLPEAELEDATRVADEI 109

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN 112
                          I+  + L                +   L       R+
Sbjct: 110 G----------IRHEIVSFSELESDQFVENDDERCYHCRTMRLGEMIETARD 151


>gi|254434432|ref|ZP_05047940.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Nitrosococcus oceani AFC27]
 gi|205822273|sp|Q3J9J6|MNMA_NITOC RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|207090765|gb|EDZ68036.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Nitrosococcus oceani AFC27]
          Length = 367

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 31/151 (20%), Gaps = 5/151 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             P  ++  SGG DSS        +      L          E EC   V +   +    
Sbjct: 2   NKPKVVVGLSGGVDSSVAALRLQQQGYPTSGLFMKNWVDFADESEC--TVAQDREDAQAV 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   H        +         +             +  R  I        A  L
Sbjct: 60  TSLLGISFH--EANFAMEYWDRVFHYFLEEYRLGRTPNPDILCNRE-IKFKTFLDHALAL 116

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETA 157
           G T I  G            R    R     
Sbjct: 117 GNTLIATGHYARIDQKEGRYRLLKGRDKNKD 147


>gi|297195442|ref|ZP_06912840.1| argininosuccinate synthase [Streptomyces pristinaespiralis ATCC
          25486]
 gi|197719181|gb|EDY63089.1| argininosuccinate synthase [Streptomyces pristinaespiralis ATCC
          25486]
          Length = 404

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 1/38 (2%)

Query: 8  APSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQ 44
              +L +SGG D S      A +    V  ++ D GQ
Sbjct: 9  TERVVLAYSGGLDTSVAIGWIAEETGAEVIAVAVDVGQ 46


>gi|150401671|ref|YP_001325437.1| hypothetical protein Maeo_1249 [Methanococcus aeolicus Nankai-3]
 gi|150014374|gb|ABR56825.1| conserved hypothetical protein [Methanococcus aeolicus Nankai-3]
          Length = 302

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 40/152 (26%), Gaps = 5/152 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRV-ETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              + + SGG+DSST L+ A D    +   + F     +K   E      +KI +     
Sbjct: 37  KPIIAMLSGGKDSSTALAMAKDLDLDIKLAVHF----VHKWSWELPKTQVQKITKEYDVP 92

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                   +L   I G  S       +   I    +       +    L   + L    G
Sbjct: 93  LIFYDITDVLCQRIQGGHSWGKNICKICKTIMKEKIREIAYKEKAYTILTGESALEKIAG 152

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAIN 159
                +      Y           +       
Sbjct: 153 PIFQYVNETYGSYVYSKMELTPVPKKYRNIKF 184


>gi|60680868|ref|YP_211012.1| putative ATP-binding PP-loop protein [Bacteroides fragilis NCTC
          9343]
 gi|60492302|emb|CAH07067.1| putative ATP-binding PP-loop protein [Bacteroides fragilis NCTC
          9343]
          Length = 435

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 18/62 (29%), Gaps = 1/62 (1%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L+  SGG DS   L   L      E    ++  R   E +      +++       
Sbjct: 19 NDKVLVTLSGGADSVALLRLLLSMGYTCEAAHCNFHLR-DKESDRDEAFVRRLCHESGVL 77

Query: 68 KD 69
            
Sbjct: 78 LH 79


>gi|53712709|ref|YP_098701.1| putative cell-cycle protein [Bacteroides fragilis YCH46]
 gi|61216469|sp|Q64WF9|TILS_BACFR RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
          Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
          Full=tRNA(Ile)-lysidine synthetase
 gi|52215574|dbj|BAD48167.1| putative cell-cycle protein [Bacteroides fragilis YCH46]
          Length = 435

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 18/62 (29%), Gaps = 1/62 (1%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L+  SGG DS   L   L      E    ++  R   E +      +++       
Sbjct: 19 NDKVLVTLSGGADSVALLRLLLSMGYTCEAAHCNFHLR-DKESDRDEAFVRRLCHESGVL 77

Query: 68 KD 69
            
Sbjct: 78 LH 79


>gi|29833320|ref|NP_827954.1| argininosuccinate synthase [Streptomyces avermitilis MA-4680]
 gi|34921579|sp|Q827Z1|ASSY_STRAW RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|29610442|dbj|BAC74489.1| putative argininosuccinate synthase [Streptomyces avermitilis
          MA-4680]
          Length = 404

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 1/38 (2%)

Query: 8  APSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQ 44
              +L +SGG D S      A +    V  ++ D GQ
Sbjct: 9  TERVVLAYSGGLDTSVAIGWIAEETGAEVIAVAVDVGQ 46


>gi|158313579|ref|YP_001506087.1| argininosuccinate synthase [Frankia sp. EAN1pec]
 gi|229889876|sp|A8LE46|ASSY_FRASN RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|158108984|gb|ABW11181.1| Argininosuccinate synthase [Frankia sp. EAN1pec]
          Length = 400

 Score = 42.6 bits (98), Expect = 0.042,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 17/51 (33%), Gaps = 1/51 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
               +L +SGG D S        +    V  L+ D GQ  +     R   
Sbjct: 1  MTERVVLAYSGGLDTSVAIGWIGAETGAEVIALAVDVGQGGEDLEAIRQRA 51


>gi|302670955|ref|YP_003830915.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TrmU
          [Butyrivibrio proteoclasticus B316]
 gi|302395428|gb|ADL34333.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TrmU
          [Butyrivibrio proteoclasticus B316]
          Length = 373

 Score = 42.6 bits (98), Expect = 0.043,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 15/35 (42%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
          +  +AL+  SGG DSS   +  L +       +  
Sbjct: 15 EKNTALIAMSGGVDSSVAAALTLKKGYNCIGCTMR 49


>gi|282860306|ref|ZP_06269375.1| tRNA(Ile)-lysidine synthetase [Prevotella bivia JCVIHMP010]
 gi|282586903|gb|EFB92139.1| tRNA(Ile)-lysidine synthetase [Prevotella bivia JCVIHMP010]
          Length = 455

 Score = 42.6 bits (98), Expect = 0.043,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 24/67 (35%), Gaps = 3/67 (4%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY---GQRNKVELECRLCVRKKI 60
          ++      L+  SGG DS   L         VE    ++   G+ +  + +  + + K+ 
Sbjct: 14 LLDNNRRYLVALSGGADSVCLLLILHKLGYAVEAAHCNFKLRGEESNRDEQFCIDLCKRQ 73

Query: 61 VELMPKW 67
             +   
Sbjct: 74 NIKIHLI 80


>gi|156325627|ref|XP_001618561.1| hypothetical protein NEMVEDRAFT_v1g154207 [Nematostella vectensis]
 gi|156199332|gb|EDO26461.1| predicted protein [Nematostella vectensis]
          Length = 318

 Score = 42.6 bits (98), Expect = 0.043,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 19/55 (34%), Gaps = 1/55 (1%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
               +L  SGG DS+           + +  +  + G   K E +  L   K + 
Sbjct: 192 NDKVVLGLSGGVDSTVAAVLLNKAIGENLYCIFVNNGLLRKNEFQSVLDQYKGMG 246


>gi|56421292|ref|YP_148610.1| argininosuccinate synthase [Geobacillus kaustophilus HTA426]
 gi|61211378|sp|Q5KW94|ASSY_GEOKA RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|56381134|dbj|BAD77042.1| argininosuccinate synthase(citrulline--aspartate ligase)
          [Geobacillus kaustophilus HTA426]
          Length = 406

 Score = 42.6 bits (98), Expect = 0.043,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 17/36 (47%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
           P  +L +SGG D+S  + W  +R   V     D G
Sbjct: 3  NPKLVLAYSGGLDTSVAIKWLQERGYDVIACCLDLG 38


>gi|86152797|ref|ZP_01071002.1| sulfate adenylyltransferase subunit 2 [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|6469931|gb|AAF13496.1|AF130466_3 sulfate adenylyltransferase subunit CysD [Campylobacter jejuni]
 gi|60679076|gb|AAX33820.1| CysD [Campylobacter jejuni subsp. jejuni]
 gi|85843682|gb|EAQ60892.1| sulfate adenylyltransferase subunit 2 [Campylobacter jejuni subsp.
           jejuni HB93-13]
          Length = 301

 Score = 42.6 bits (98), Expect = 0.043,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 56/190 (29%), Gaps = 13/190 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVET----LSFDYGQRNKVELECRLCV 56
           M ++I +     +L+S G+DSS  L      F         +  D   + K  +E R   
Sbjct: 19  MREVISEFEKPAMLYSVGKDSSVMLHLLQKAFYPTVPPLPLVHVDTTWKFKEMIEFRDKR 78

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
            K++   +  +++   ++  L         H+ ++K   +K   +      V G      
Sbjct: 79  AKELGMELIVYQNPKIKELNLSPFTHDSSMHTDISKTQGLKQMLDLYQFDAVFGGARRD- 137

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
                         I     E       + R +           G    V    PL    
Sbjct: 138 -----EEKSRAKERIYSFRDENHTWDPKNQRPELWNLYNGRHKKGESIRV---FPLSNWT 189

Query: 177 KYETWKLAQD 186
           + + W+    
Sbjct: 190 ELDIWQYIYK 199


>gi|298386289|ref|ZP_06995845.1| tRNA(Ile)-lysidine synthase [Bacteroides sp. 1_1_14]
 gi|298260666|gb|EFI03534.1| tRNA(Ile)-lysidine synthase [Bacteroides sp. 1_1_14]
          Length = 426

 Score = 42.6 bits (98), Expect = 0.043,   Method: Composition-based stats.
 Identities = 10/70 (14%), Positives = 22/70 (31%), Gaps = 3/70 (4%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR---NKVELECRLCVRKKI 60
          +       L+  SGG DS   L        + E    ++  R   +  + +    + +K 
Sbjct: 15 LFSPNDKLLIALSGGADSVALLRVLHTAGYQCEAAHCNFHLRGEESNRDEQFVRQLCQKY 74

Query: 61 VELMPKWKDS 70
             +     +
Sbjct: 75 GIRLHTIDFN 84


>gi|289422484|ref|ZP_06424327.1| tRNA(Ile)-lysidine synthase [Peptostreptococcus anaerobius 653-L]
 gi|289157056|gb|EFD05678.1| tRNA(Ile)-lysidine synthase [Peptostreptococcus anaerobius 653-L]
          Length = 462

 Score = 42.6 bits (98), Expect = 0.043,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 59/197 (29%), Gaps = 26/197 (13%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRLCVR 57
           N++I++    ++  SGG DS   L       L    RV  +  +    +++         
Sbjct: 13  NNMIEEGDRIIVGLSGGPDSVCLLHVLHRLSLKMNIRVYAVHLN----HQIRGLDAHLDA 68

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
             + +L  K   +     I                +V     +N L            + 
Sbjct: 69  LYVSKLCHKLGIACFIRSI----------------DVPKYCSENGLGLEDGARNLRYMIF 112

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
               +  R+G   I +G  + D +     R      I+    +       V  P++ L +
Sbjct: 113 KE--VKDRIGANKIAVGHNKNDQAETVIMRIMRGTGIKGLSGMDYVRSDGVIRPILDLDR 170

Query: 178 YETWKLAQDIGGQDLVN 194
            +     +D      ++
Sbjct: 171 SDIESYCKDHSLTPRID 187


>gi|254477369|ref|ZP_05090755.1| glutamine-dependent NAD(+) synthetase [Ruegeria sp. R11]
 gi|214031612|gb|EEB72447.1| glutamine-dependent NAD(+) synthetase [Ruegeria sp. R11]
          Length = 554

 Score = 42.6 bits (98), Expect = 0.043,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 61/215 (28%), Gaps = 18/215 (8%)

Query: 1   MNDIIKKA--PSALLLFSGGQDSSTCLSWAL----DRFDRVETLSFDYGQRNKVELECRL 54
           + D ++K      LL  SGG DS+   + A+        R   L  +Y   ++  L+   
Sbjct: 275 LRDYMRKTGFKKVLLGLSGGVDSALVAAIAVDALGAENVRCVMLPSEYT--SQGSLDDAE 332

Query: 55  CVRKKIVELMPKWKDSLGEDHILP-LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
            V K +         S G   I   LA L       LT+          L          
Sbjct: 333 AVAKALGVHYDYVPISEGRAAITNTLAPLFAGLEEGLTEENIQSRLRGLLLMAMSNKFGE 392

Query: 114 IFLVFAATLAYRLGITNIVIGVCETD------YSGYPDCRHDTIRAIETAINLGMESHV- 166
           + L         +G   I   +          Y            A      +G E  V 
Sbjct: 393 MLLTTGNKSEVAVGYATIYGDMNGGYNPIKDLYKTRVFETCRWRNANHRPWMMGPEGEVI 452

Query: 167 --TVHTPLMWLKKYETWKLAQDIGGQDLVNLILEE 199
             +V       +  E  K +  +     ++ +LE 
Sbjct: 453 RPSVIDKPPSAELREDQKDSDSLPDYPELDALLEM 487


>gi|13626098|sp|P57799|ASSY_LACLA RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|12722971|gb|AAK04222.1|AE006250_9 argininosuccinate synthase [Lactococcus lactis subsp. lactis
          Il1403]
          Length = 398

 Score = 42.6 bits (98), Expect = 0.043,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 15/33 (45%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVET 37
          +      +L +SGG D+S  + W  D+   V  
Sbjct: 1  MMGNKKIVLAYSGGLDTSVAVKWLTDKGFDVIA 33


>gi|15669205|ref|NP_248010.1| hypothetical protein MJ_1016 [Methanocaldococcus jannaschii DSM
           2661]
 gi|38503287|sp|Q58422|Y1016_METJA RecName: Full=Uncharacterized protein MJ1016
 gi|1499857|gb|AAB99022.1| hypothetical protein MJ_1016 [Methanocaldococcus jannaschii DSM
           2661]
          Length = 294

 Score = 42.6 bits (98), Expect = 0.043,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 61/209 (29%), Gaps = 28/209 (13%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +++ SGG+DSST ++ A D    +E L   Y             V KK+VE + K  D  
Sbjct: 38  VVMASGGKDSSTAIALAKDLGLNIEYLIHFY-------HRWSWDVSKKMVEKLSKKFDIP 90

Query: 72  GEDHILPLAILGDISH--SSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              + +   +L        S    +   I  +   +        I +   + L    G  
Sbjct: 91  VIFYNITDELLKRTKGAKGSSICRICKNIMKDKAVDISKEKGIRIIMTGDSALEKVSGAV 150

Query: 130 NIVIGVCETDYSGYPD-------------------CRHDTIRAIETAINLGMESHVTVHT 170
              +     +                          R     A E  + L    ++ +  
Sbjct: 151 MNYLRDVYGEVVYNKMELTPVPQKYSKGKDKEVLFFRPLIRLACEDVLKLMDYYNIEIER 210

Query: 171 PLMWLKKYETWKLAQDIGGQDLVNLILEE 199
                 K   W+    +   D   L+ E+
Sbjct: 211 AHEVGDKIGFWREGCCLQYADENALLNEK 239


>gi|291167092|gb|EFE29138.1| GMP synthase [Filifactor alocis ATCC 35896]
          Length = 510

 Score = 42.6 bits (98), Expect = 0.043,   Method: Composition-based stats.
 Identities = 21/185 (11%), Positives = 43/185 (23%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +L  SGG DSS   +        ++  +  D+G   K E +              +  
Sbjct: 217 KVVLALSGGVDSSVVAALISKAIGSQLTCIFVDHGLMRKNEGDEVEQAFANSGMKFIRVD 276

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L      +     + +      ++       V       +      +     
Sbjct: 277 AEKRFLDKLAGVSDPEQKRKIIGEEFIRVFEEEGRKIGAVDFLAQGTIYPDVIESGEGDA 336

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I                              +     +  PL  L K E  +L  ++G
Sbjct: 337 AVIKSHHNVGGLP-------------------AVVDFKGLIEPLRNLFKDEVRQLGLEVG 377

Query: 189 GQDLV 193
             + +
Sbjct: 378 LAEYL 382


>gi|297562417|ref|YP_003681391.1| argininosuccinate synthase [Nocardiopsis dassonvillei subsp.
          dassonvillei DSM 43111]
 gi|296846865|gb|ADH68885.1| argininosuccinate synthase [Nocardiopsis dassonvillei subsp.
          dassonvillei DSM 43111]
          Length = 482

 Score = 42.6 bits (98), Expect = 0.043,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 23/57 (40%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  ++W  D+       + D GQ ++ ++               +  D
Sbjct: 16 IAFSGGLDTSVAVAWMRDKGAVPYAYTADIGQYDEPDIASVPGRATAYGAEGARLVD 72


>gi|240146382|ref|ZP_04744983.1| argininosuccinate synthase [Roseburia intestinalis L1-82]
 gi|257201492|gb|EEU99776.1| argininosuccinate synthase [Roseburia intestinalis L1-82]
 gi|291535768|emb|CBL08880.1| argininosuccinate synthase [Roseburia intestinalis M50/1]
 gi|291538261|emb|CBL11372.1| argininosuccinate synthase [Roseburia intestinalis XB6B4]
          Length = 410

 Score = 42.6 bits (98), Expect = 0.043,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 57/213 (26%), Gaps = 26/213 (12%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L +SGG D++  + W  + +   V     D GQ  +++      +         
Sbjct: 1   MKEKVILAYSGGLDTTAIIPWLKENYDYEVICCCIDCGQEEELDGLEERAI--------- 51

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
               S G   +  + I+ +     +   V       N           +       +A +
Sbjct: 52  ----SCGASKLYIVDIIDEFCDDYIMPCVQANAIYENKYLLGTSMARPLIAKKLVEIARK 107

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G T I  G                  A +  I              M  ++ E      
Sbjct: 108 EGATAICHGATGKGNDQIRFELGIKALAPDLKIIAAWRDSKW----TMDSRESEI----- 158

Query: 186 DIGGQDLVNLIL-EESHTCYLGKRDKRYEWGYG 217
           +      ++L    ++   Y   R+  +    G
Sbjct: 159 EYCKAHGIHLPFSADT--SYSRDRNIWHISHEG 189


>gi|212224254|ref|YP_002307490.1| Hypothetical ATPase [Thermococcus onnurineus NA1]
 gi|212009211|gb|ACJ16593.1| Hypothetical ATPase [Thermococcus onnurineus NA1]
          Length = 199

 Score = 42.6 bits (98), Expect = 0.043,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 16/54 (29%), Gaps = 2/54 (3%)

Query: 14 LFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
          L+SGG+DSS            V  ++  +G              + +       
Sbjct: 6  LYSGGKDSSLAAWILTRLGYEVRLVTVSFG--LLDNWRYAREAAQTLGFEHEVL 57


>gi|198453521|ref|XP_001359229.2| GA12079 [Drosophila pseudoobscura pseudoobscura]
 gi|198132392|gb|EAL28374.2| GA12079 [Drosophila pseudoobscura pseudoobscura]
          Length = 419

 Score = 42.6 bits (98), Expect = 0.043,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 57/209 (27%), Gaps = 18/209 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            + +L +SGG D+S  L W LD+   V  +  D GQ+   +          I        
Sbjct: 4   ETVILAYSGGLDTSCILKWLLDQQYNVICVLADVGQK--EDFAAAEKKALNIGANKVIVV 61

Query: 69  D---SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT---- 121
           D   S  ED+I P   +G I         ++     ++    V  R     +        
Sbjct: 62  DAKQSFVEDYIWPAIQMGLIYEERYLLGTSLARPCISVALMEVARRYDAKYLAHGATGKG 121

Query: 122 ----LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                                 +     CR    R    A        V+      W   
Sbjct: 122 NDQVRFELCAYALKPDLKIIAPWRDVEFCRRFQGRQDLIAYAQANGIEVSAKPSTPWSTD 181

Query: 178 YETWKLAQDIGGQDLVNLI-----LEESH 201
                ++ + G  +  N +      E + 
Sbjct: 182 ANILHISYESGVLEDPNTVAPASLYEMTV 210


>gi|88705811|ref|ZP_01103520.1| tRNA(Ile)-lysidine synthase [Congregibacter litoralis KT71]
 gi|88699882|gb|EAQ96992.1| tRNA(Ile)-lysidine synthase [Congregibacter litoralis KT71]
          Length = 422

 Score = 42.6 bits (98), Expect = 0.043,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 3/56 (5%)

Query: 13 LLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLC--VRKKIVELMP 65
          + +SGG DS+  L  A     DR+  L  ++G + +       C    +++     
Sbjct: 20 VAYSGGLDSTVLLHAAHKTCPDRLVALHANHGLQAEARRWQAHCEAFCEQLGVAFA 75


>gi|332992297|gb|AEF02352.1| GMP synthase [Alteromonas sp. SN2]
          Length = 525

 Score = 42.6 bits (98), Expect = 0.044,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 51/183 (27%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS           + +  +  D G    + L     V +   +     
Sbjct: 228 DRVILGLSGGVDSSVTAMLLHRAIGENLTCVFVDNG---LLRLNEADQVMEMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +    L  L DI    L +                  R           A  L 
Sbjct: 285 IIRVDAEERF-LGRLKDIEDPELKRKAIGNE----------FVRVFDEEAGKLANAKWLA 333

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I   V E+  S         I++      L  +  + +  PL  L K E  K+  ++
Sbjct: 334 QGTIYPDVIESAGSATGKAHV--IKSHHNVGGLPEDMALGLVEPLRELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|295086827|emb|CBK68350.1| GMP synthase (glutamine-hydrolyzing) [Bacteroides xylanisolvens
           XB1A]
          Length = 507

 Score = 42.6 bits (98), Expect = 0.044,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 53/187 (28%), Gaps = 21/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D+G   K              E     
Sbjct: 214 DKVVLGLSGGVDSSVAAVLLNKAIGKNLTCIFVDHGMLRK-------------NEFKNVM 260

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           KD       +      +   + L      + +   +   F+   ++              
Sbjct: 261 KDYECLGLNVIGVDASEKFFTELAGVAEPEAKRKIIGKGFIDVFDVEA-------HKIKD 313

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G    D           I++      L  + ++ +  PL  L K E  ++ +++
Sbjct: 314 VKWLAQGTIYPDCIESLSITGTVIKSHHNVGGLPEKMNLKLCEPLRLLFKDEVRRVGREL 373

Query: 188 GGQDLVN 194
           G  + + 
Sbjct: 374 GMPEHLI 380


>gi|269794840|ref|YP_003314295.1| NAD+ synthetase [Sanguibacter keddieii DSM 10542]
 gi|269097025|gb|ACZ21461.1| NAD+ synthetase [Sanguibacter keddieii DSM 10542]
          Length = 553

 Score = 42.6 bits (98), Expect = 0.044,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 3/60 (5%)

Query: 10  SALLL-FSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
            +++L  SGG DS+   +   D    D V  +S      ++   +  L + K+I      
Sbjct: 294 RSVVLGLSGGIDSALVAAICADAIGGDNVYGVSMPSTYSSEHSKDDALDLAKRIGAHYRV 353


>gi|237715568|ref|ZP_04546049.1| bifunctional GMP synthase/glutamine amidotransferase [Bacteroides
           sp. D1]
 gi|262408577|ref|ZP_06085123.1| GMP synthase domain-containing protein [Bacteroides sp. 2_1_22]
 gi|294647045|ref|ZP_06724658.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Bacteroides ovatus SD CC 2a]
 gi|294809879|ref|ZP_06768555.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Bacteroides xylanisolvens SD CC 1b]
 gi|298481412|ref|ZP_06999604.1| GMP synthase [Bacteroides sp. D22]
 gi|229444277|gb|EEO50068.1| bifunctional GMP synthase/glutamine amidotransferase [Bacteroides
           sp. D1]
 gi|262353442|gb|EEZ02536.1| GMP synthase domain-containing protein [Bacteroides sp. 2_1_22]
 gi|292637622|gb|EFF56027.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Bacteroides ovatus SD CC 2a]
 gi|294442908|gb|EFG11699.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Bacteroides xylanisolvens SD CC 1b]
 gi|298272276|gb|EFI13845.1| GMP synthase [Bacteroides sp. D22]
          Length = 507

 Score = 42.6 bits (98), Expect = 0.044,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 53/187 (28%), Gaps = 21/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D+G   K              E     
Sbjct: 214 DKVVLGLSGGVDSSVAAVLLNKAIGKNLTCIFVDHGMLRK-------------NEFKNVM 260

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           KD       +      +   + L      + +   +   F+   ++              
Sbjct: 261 KDYECLGLNVIGVDASEKFFTELAGVAEPEAKRKIIGKGFIDVFDVEA-------HKIKD 313

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G    D           I++      L  + ++ +  PL  L K E  ++ +++
Sbjct: 314 VKWLAQGTIYPDCIESLSITGTVIKSHHNVGGLPEKMNLKLCEPLRLLFKDEVRRVGREL 373

Query: 188 GGQDLVN 194
           G  + + 
Sbjct: 374 GMPEHLI 380


>gi|228937366|ref|ZP_04100013.1| tRNA(Ile)-lysidine synthase [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228970252|ref|ZP_04130912.1| tRNA(Ile)-lysidine synthase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228976822|ref|ZP_04137235.1| tRNA(Ile)-lysidine synthase [Bacillus thuringiensis Bt407]
 gi|228782918|gb|EEM31083.1| tRNA(Ile)-lysidine synthase [Bacillus thuringiensis Bt407]
 gi|228789487|gb|EEM37406.1| tRNA(Ile)-lysidine synthase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228822324|gb|EEM68305.1| tRNA(Ile)-lysidine synthase [Bacillus thuringiensis serovar
           berliner ATCC 10792]
          Length = 480

 Score = 42.6 bits (98), Expect = 0.044,   Method: Composition-based stats.
 Identities = 22/197 (11%), Positives = 52/197 (26%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D++K   + ++  SGG DS   L + L++                          + +V 
Sbjct: 21  DVLKNDSTIVVGVSGGPDSLALLYYLLEK--------------------RAEKQLEIVVA 60

Query: 63  LMPKW--KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +      D   ED      +  ++     T  + +                     F  
Sbjct: 61  HVDHMFRGDESHEDLQFVQDLCEELGIICETIRINVSQYQQQYGMNAQVAARECRYAFLE 120

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKK 177
            +  +     + +G    D       R       +    + ++       +  PL+ + K
Sbjct: 121 RIMKKYDARYVALGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGYLIRPLLGVTK 180

Query: 178 YETWKLAQDIGGQDLVN 194
            E       +     ++
Sbjct: 181 EEIVDYCNKLNLIPRID 197


>gi|169334910|ref|ZP_02862103.1| hypothetical protein ANASTE_01316 [Anaerofustis stercorihominis
          DSM 17244]
 gi|169257648|gb|EDS71614.1| hypothetical protein ANASTE_01316 [Anaerofustis stercorihominis
          DSM 17244]
          Length = 248

 Score = 42.6 bits (98), Expect = 0.044,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 25/81 (30%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
          + +  K      L FSGG DSS  L                   +   EL+  + +  K+
Sbjct: 3  LEEFFKYYKKVALAFSGGVDSSYLLYILKKLNIESTAYFVKSEFQPDFELKESITLATKL 62

Query: 61 VELMPKWKDSLGEDHILPLAI 81
             +    + +  +  +    
Sbjct: 63 GADLKIIDNPILNEEKIITND 83


>gi|253582748|ref|ZP_04859968.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
 gi|251835324|gb|EES63865.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
          Length = 302

 Score = 42.6 bits (98), Expect = 0.044,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 4/60 (6%)

Query: 13  LLFSGGQDSSTCL----SWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           + FSGG DSS  L      A+    +V  ++         E+E      ++I       K
Sbjct: 50  VAFSGGVDSSLLLKAACLSAVKNGKKVYAVTMHTTLHPMNEIESSKKTAEEIGAEHLIIK 109


>gi|256397740|ref|YP_003119304.1| argininosuccinate synthase [Catenulispora acidiphila DSM 44928]
 gi|256363966|gb|ACU77463.1| argininosuccinate synthase [Catenulispora acidiphila DSM 44928]
          Length = 488

 Score = 42.6 bits (98), Expect = 0.044,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 25/57 (43%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  ++W  ++       + D GQ ++ +L       +     + +  D
Sbjct: 16 IAFSGGLDTSVAVAWMREKGAVPCAYTADLGQYDEPDLPGVPGRAEAYGAELARLVD 72


>gi|149064973|gb|EDM15049.1| asparagine synthetase, isoform CRA_a [Rattus norvegicus]
          Length = 586

 Score = 42.6 bits (98), Expect = 0.044,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 4/62 (6%)

Query: 13  LLFSGGQDSSTCLSWALDRFDR---VETL-SFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            L SGG DSS   +  L +         L +F  G  +  +L     V   I     +  
Sbjct: 280 CLLSGGLDSSLVAASLLKQLKEAQVPYALQTFAIGMEDSPDLLAARKVANYIGSEHHEVL 339

Query: 69  DS 70
            +
Sbjct: 340 FN 341


>gi|150021282|ref|YP_001306636.1| NAD synthetase [Thermosipho melanesiensis BI429]
 gi|149793803|gb|ABR31251.1| NAD+ synthetase [Thermosipho melanesiensis BI429]
          Length = 574

 Score = 42.6 bits (98), Expect = 0.044,   Method: Composition-based stats.
 Identities = 22/198 (11%), Positives = 54/198 (27%), Gaps = 9/198 (4%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR--FDRVETLSF--DYGQRNKVELECRLCVRKKIVELM 64
              ++  SGG DSS   + A++    D V  +     Y   + +E      + + +    
Sbjct: 316 KKVVIGLSGGMDSSLVAAIAVEALGKDNVLGILMPSMYSSSHSIED--AKNLAENLGIKY 373

Query: 65  PKWK-DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
              K +++    +  L  +   +   +T+          +          I L       
Sbjct: 374 YIIKIENIYYSFVNELKEIFSNTKEDITEENLQARIRGTILMAISNKFGHIVLATGNKSE 433

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIR--AIETAINLGMESHVTVHTPLMWLKKYETW 181
              G + +   +           + D  +                 V       +     
Sbjct: 434 IATGYSTLYGDMVGGFSPIKDVYKTDVYKMAKWYNKFKGKEIIPQNVFVKPPSAELRPNQ 493

Query: 182 KLAQDIGGQDLVNLILEE 199
           K    +   ++++ IL+ 
Sbjct: 494 KDQDTLPPYEILDEILKL 511


>gi|307565061|ref|ZP_07627574.1| tRNA(Ile)-lysidine synthetase [Prevotella amnii CRIS 21A-A]
 gi|307346230|gb|EFN91554.1| tRNA(Ile)-lysidine synthetase [Prevotella amnii CRIS 21A-A]
          Length = 456

 Score = 42.6 bits (98), Expect = 0.045,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 18/42 (42%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR 45
          ++ K    L+  SGG DS + L        ++  +  ++  R
Sbjct: 14 LLNKEKCYLVALSGGADSVSLLLILHQLGYKINAVHCNFKLR 55


>gi|294674844|ref|YP_003575460.1| argininosuccinate synthase [Prevotella ruminicola 23]
 gi|294471726|gb|ADE81115.1| argininosuccinate synthase [Prevotella ruminicola 23]
          Length = 400

 Score = 42.6 bits (98), Expect = 0.045,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 53/195 (27%), Gaps = 13/195 (6%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++ FSGG D+S  +         V     + G  +  +L+       K+       
Sbjct: 3   NKKVVVAFSGGLDTSYTVMKLTQDGWDVYAACANTGGFSDEQLKKNEENAFKLGAKAYVT 62

Query: 68  KDSLGE--DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            D   E  +  L   I G++  ++      + +    +       R    +   A     
Sbjct: 63  LDVTHEYYEKSLKYMIFGNVLRNNC---YPISVSSERIFQAIAIARYAKEIGADAIAHGS 119

Query: 126 LGI------TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            G        ++   V           R   +   E    L         T L +     
Sbjct: 120 TGAGNDQIRFDMTFLVMAPGVEIITLTRDKKLTRKEEVDYLNEHGFFADFTKLKYSYNVG 179

Query: 180 TWKLAQDIGGQDLVN 194
            W     I G +L++
Sbjct: 180 IW--GTSICGGELLD 192


>gi|253579280|ref|ZP_04856550.1| sulfate adenylyltransferase [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849378|gb|EES77338.1| sulfate adenylyltransferase [Ruminococcus sp. 5_1_39BFAA]
          Length = 372

 Score = 42.6 bits (98), Expect = 0.045,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 58/191 (30%), Gaps = 16/191 (8%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCV 56
           M ++  +    ++L+S G+DSS  L  A+  F         L  D   +    +E R  +
Sbjct: 91  MREVAAECEKPVMLYSIGKDSSVMLHLAMKAFYPEKPPFPFLHIDTTWKFHEMIEFRDRI 150

Query: 57  RKKIV-ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
            KK   +++    +   +  I P       +    T+ +   +        F  GR    
Sbjct: 151 AKKNGIDMLVYTNEEGVKAGINPFDNGSAYTDIMKTQALKQALTKYGFTAAFGGGRRD-- 208

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
                          I             + R +  +   T I  G    V    P+   
Sbjct: 209 ------EEKSRAKERIFSFRNSAQAWDPKNQRPEMWKLYNTKIQKGESMRV---FPISNW 259

Query: 176 KKYETWKLAQD 186
            + + W+  Q 
Sbjct: 260 TEKDIWQYIQR 270


>gi|254167917|ref|ZP_04874766.1| Phosphoadenosine phosphosulfate reductase family protein
           [Aciduliprofundum boonei T469]
 gi|197623208|gb|EDY35774.1| Phosphoadenosine phosphosulfate reductase family protein
           [Aciduliprofundum boonei T469]
          Length = 411

 Score = 42.6 bits (98), Expect = 0.045,   Method: Composition-based stats.
 Identities = 19/168 (11%), Positives = 43/168 (25%), Gaps = 4/168 (2%)

Query: 2   NDIIKKAPSA---LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           N+ I++   A    + FSGG+DS T L  A     +   +  + G               
Sbjct: 184 NEAIERIKRAKADYVAFSGGKDSETALYLAYKAGVK-RAIYANTGLEFPETERFAYNFAD 242

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
            +   + + +  +    ++    +        TK + ++             R    L  
Sbjct: 243 YLGIELIEIRPKVDFWEMVEKLGVPTKDRRWCTKYLKLEGLKKFKGTIVDGSRKYESLGR 302

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV 166
                        VI       +       +  +     +       +
Sbjct: 303 MLRPQESKLGNLKVIYPILDWLALDVWLFLEWKKLPHNPLYDMGYERI 350


>gi|110803765|ref|YP_699484.1| argininosuccinate synthase [Clostridium perfringens SM101]
 gi|110684266|gb|ABG87636.1| thiamin biosynthesis protein ThiI [Clostridium perfringens SM101]
          Length = 326

 Score = 42.6 bits (98), Expect = 0.045,   Method: Composition-based stats.
 Identities = 15/135 (11%), Positives = 31/135 (22%), Gaps = 13/135 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            AL + SGG DS        D+   V  + F          E    + K+I   +     
Sbjct: 3   RALAMISGGLDSILAAKLIKDQGIEVIGICFK---SYFFNEENAKRMCKQIDMPLE---- 55

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 ++  +                 +      +  +   +   L          G  
Sbjct: 56  ------VVDFSEEHFEMVKDPKHGRGKNMNPCIDCHAMMMRYSGELLKKFDADFIITGEV 109

Query: 130 NIVIGVCETDYSGYP 144
                + +   +   
Sbjct: 110 LNQRPMSQNRQALNT 124


>gi|194333893|ref|YP_002015753.1| argininosuccinate synthase [Prosthecochloris aestuarii DSM 271]
 gi|229889893|sp|B4S7R9|ASSY_PROA2 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|194311711|gb|ACF46106.1| Argininosuccinate synthase [Prosthecochloris aestuarii DSM 271]
          Length = 401

 Score = 42.6 bits (98), Expect = 0.045,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 2/54 (3%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVR 57
          + K   AL  +SGG D+S  + W  D++D  +  ++ + GQ  +VE      + 
Sbjct: 1  MSKEKIALA-YSGGLDTSVMIKWLKDKYDAEIVAVTGNLGQEKEVENLEEKAIA 53


>gi|297183634|gb|ADI19760.1| hypothetical protein [uncultured gamma proteobacterium EB000_37F04]
          Length = 538

 Score = 42.6 bits (98), Expect = 0.045,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 67/204 (32%), Gaps = 5/204 (2%)

Query: 1   MNDIIKKA--PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCV 56
           M D + K   P  +L  SGG DS+  L+ A+D    +RVE +   +     + +E     
Sbjct: 270 MRDYVNKNGFPGVVLGLSGGIDSAVTLAVAVDALGPERVEAVMMPFRYTASMSIEDAAEQ 329

Query: 57  RKKIV-ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
                     +  + L E  +  LA   +    ++T+          L  +    +N++ 
Sbjct: 330 ANTQGVAFSNRSIEPLYEAFMTTLAPAFEGLEPNITEENLQARCRGVLLMSISNKKNLLV 389

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
           L         +G + +   +           +       +    LG      V +     
Sbjct: 390 LTTGNKSELAVGYSTLYGDMAGGFDVLKDCPKMLVYALAQYRNTLGQCIPERVISRPPSA 449

Query: 176 KKYETWKLAQDIGGQDLVNLILEE 199
           +     K    +   ++++ I+E 
Sbjct: 450 ELAPDQKDEDSLPPYEVLDQIIEH 473


>gi|304311842|ref|YP_003811440.1| GMP synthase [gamma proteobacterium HdN1]
 gi|301797575|emb|CBL45795.1| GMP synthase [gamma proteobacterium HdN1]
          Length = 521

 Score = 42.6 bits (98), Expect = 0.045,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 52/181 (28%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           +LL  SGG DSS   +       D++  +  D+G   K E        + +         
Sbjct: 226 VLLGLSGGVDSSVVAALLNRAIGDKLTCVFVDHGLLRKNEGN------QVMATFAQHMGI 279

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +       + +      S   +   +              R       A    Y     
Sbjct: 280 RVIRVDAEDVFLGKLKGESDPERKRKIIGNTFIEVFDQESARLNNIKWLAQGTIY----- 334

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                    + +G  + +   I++      L  +  + +  PL  L K E  ++  ++G 
Sbjct: 335 -----PDVIESAGTKNGKAHLIKSHHNVGGLPEDMKMKLVEPLRELFKDEVRRIGVELGL 389

Query: 190 Q 190
            
Sbjct: 390 P 390


>gi|295676799|ref|YP_003605323.1| GMP synthase, large subunit [Burkholderia sp. CCGE1002]
 gi|295436642|gb|ADG15812.1| GMP synthase, large subunit [Burkholderia sp. CCGE1002]
          Length = 527

 Score = 42.6 bits (98), Expect = 0.045,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 58/184 (31%), Gaps = 18/184 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D+G     E        ++++ L      
Sbjct: 225 VILGLSGGVDSSVAAALLHRAIGDQLTCVFVDHGLLRLNE-------AEQVMALFADHLG 277

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     A LG ++  +  +     I    +                 T A  L   
Sbjct: 278 VKVIHVDASEAFLGKLAGVTDPEAKRKIIGAEFVEVFQAE-------AGKLTDAKWLAQG 330

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+   G       TI++      L    ++ +  PL  L K E  +L   +G 
Sbjct: 331 TIYPDVIESAGKGKK--AAQTIKSHHNVGGLPETLNLKLLEPLRELFKDEVRELGVKLGL 388

Query: 190 QDLV 193
              +
Sbjct: 389 PHSM 392


>gi|268610931|ref|ZP_06144658.1| argininosuccinate synthase [Ruminococcus flavefaciens FD-1]
          Length = 411

 Score = 42.6 bits (98), Expect = 0.045,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 53/158 (33%), Gaps = 10/158 (6%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           K     +L +SGG D+S  + W  + ++   +  +S D GQ  +++      ++    +L
Sbjct: 5   KDIKKVVLAYSGGLDTSIIIPWLKENYNNPEIIAVSGDVGQGTELDGLEEKAIKTGASKL 64

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +    K+   +D++ P    G I  +         +   +     +  R     +     
Sbjct: 65  IVADLKEEFIQDYVYPTVQAGAIYEN-------RYMLGTSFARPIIAKRIAEIALEEGAD 117

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         + +         I A     ++
Sbjct: 118 AICHGCTGKGNDQVRFELAIKAFAPEMQIIAPWREWDI 155


>gi|255013262|ref|ZP_05285388.1| putative cell-cycle protein [Bacteroides sp. 2_1_7]
          Length = 438

 Score = 42.6 bits (98), Expect = 0.045,   Method: Composition-based stats.
 Identities = 22/193 (11%), Positives = 54/193 (27%), Gaps = 23/193 (11%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
             ++ +    L+  SGG DS   L   +        L  ++  R +          +   
Sbjct: 12  YRLLSEDRPVLVGLSGGADSVALLGVLVRLGYPCIALHCNFHLRGEESDRDEAFACEFAE 71

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
            L           H +    +      +  K++++++    L   +           A  
Sbjct: 72  SLE-------VPFHKIDFDTIS----YAGEKHLSIEMAARELRYAWFEEMRERLGGQATA 120

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           +A+        + +     +G         R            +  +  PL+ + + +  
Sbjct: 121 VAHHRDDNVETVLMNLIRGTGIRGMSGIRPR------------NGFIVRPLLCVSREDIL 168

Query: 182 KLAQDIGGQDLVN 194
               D G   +V+
Sbjct: 169 AWLADQGYAYMVD 181


>gi|261377822|ref|ZP_05982395.1| tRNA(Ile)-lysidine synthase [Neisseria cinerea ATCC 14685]
 gi|269146124|gb|EEZ72542.1| tRNA(Ile)-lysidine synthase [Neisseria cinerea ATCC 14685]
          Length = 457

 Score = 42.6 bits (98), Expect = 0.045,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 11/38 (28%), Gaps = 4/38 (10%)

Query: 10 SALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYG 43
             +  SGG DS   L              E L   +G
Sbjct: 44 KIAVALSGGLDSVVLLHLLVCAGKKGGFIPEALHIHHG 81


>gi|209518734|ref|ZP_03267550.1| GMP synthase, large subunit [Burkholderia sp. H160]
 gi|209500848|gb|EEA00888.1| GMP synthase, large subunit [Burkholderia sp. H160]
          Length = 527

 Score = 42.6 bits (98), Expect = 0.045,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 58/184 (31%), Gaps = 18/184 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D+G     E        ++++ L      
Sbjct: 225 VILGLSGGVDSSVAAALLHRAIGDQLTCVFVDHGLLRLNE-------AEQVMALFADHLG 277

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                     A LG ++  +  +     I    +                 T A  L   
Sbjct: 278 VKVIHVDASEAFLGKLAGVTDPEAKRKIIGAEFVEVFQAE-------AGKLTDAKWLAQG 330

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+   G       TI++      L    ++ +  PL  L K E  +L   +G 
Sbjct: 331 TIYPDVIESAGKGKK--AAQTIKSHHNVGGLPETLNLKLLEPLRELFKDEVRELGVKLGL 388

Query: 190 QDLV 193
              +
Sbjct: 389 PHSM 392


>gi|317132648|ref|YP_004091962.1| GMP synthase, large subunit [Ethanoligenens harbinense YUAN-3]
 gi|315470627|gb|ADU27231.1| GMP synthase, large subunit [Ethanoligenens harbinense YUAN-3]
          Length = 510

 Score = 42.6 bits (98), Expect = 0.045,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 19/52 (36%), Gaps = 1/52 (1%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
               LL  SGG DS+   +        ++  +  D+G   K E +      +
Sbjct: 215 HGRVLLALSGGVDSAVAAALLSRAVGRQLTCIFVDHGLMRKNEGDEVDQAFQ 266


>gi|301309867|ref|ZP_07215806.1| tRNA(Ile)-lysidine synthase [Bacteroides sp. 20_3]
 gi|300831441|gb|EFK62072.1| tRNA(Ile)-lysidine synthase [Bacteroides sp. 20_3]
          Length = 438

 Score = 42.6 bits (98), Expect = 0.045,   Method: Composition-based stats.
 Identities = 22/193 (11%), Positives = 54/193 (27%), Gaps = 23/193 (11%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
             ++ +    L+  SGG DS   L   +        L  ++  R +          +   
Sbjct: 12  YRLLSEDRPVLVGLSGGADSVALLGVLVRLGYPCIALHCNFHLRGEESDRDEAFACEFAE 71

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
            L           H +    +      +  K++++++    L   +           A  
Sbjct: 72  SLE-------VPFHKIDFDTIS----YAGEKHLSIEMAARELRYAWFEEMRERLGGQAIA 120

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           +A+        + +     +G         R            +  +  PL+ + + +  
Sbjct: 121 VAHHRDDNVETVLMNLIRGTGIRGMSGIRPR------------NGFIVRPLLCVSREDIL 168

Query: 182 KLAQDIGGQDLVN 194
               D G   +V+
Sbjct: 169 AWLADQGYAYMVD 181


>gi|268325116|emb|CBH38704.1| hypothetical protein, asparagine synthase and DUF71 family
           [uncultured archaeon]
          Length = 711

 Score = 42.6 bits (98), Expect = 0.045,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 21/59 (35%), Gaps = 3/59 (5%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDY---GQRNKVELECRLCVRKKIVELMPKWK 68
           +LFSGG DS+       +        +      G ++  +L+    +   +   +   K
Sbjct: 236 VLFSGGLDSTLIAYLCKELGADFVCYTVAVEEPGMKDAEDLDYAKQIAADLGLKLKLIK 294



 Score = 36.4 bits (82), Expect = 3.1,   Method: Composition-based stats.
 Identities = 9/26 (34%), Positives = 11/26 (42%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETL 38
            LFS G+DS+  L         V  L
Sbjct: 484 CLFSSGKDSTYALWLMKKVGYPVVCL 509


>gi|257453848|ref|ZP_05619126.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enhydrobacter aerosaccus SK60]
 gi|257448775|gb|EEV23740.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Enhydrobacter aerosaccus SK60]
          Length = 391

 Score = 42.6 bits (98), Expect = 0.045,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 32/131 (24%), Gaps = 5/131 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS            VE L     + +     C       + +       
Sbjct: 19  RVIVGMSGGVDSSVTAVLLKQAGFDVEGLFMKNWEEDDGTEYC--TAMTDLADAQAVADK 76

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              + H    A         + ++   +      PN  +     +        A  LG  
Sbjct: 77  IGIKLHT---ANFAMEYWDRVFEHFLAEYSAGRTPNPDILCNKEVKFKAFLDYALTLGAD 133

Query: 130 NIVIGVCETDY 140
            I  G      
Sbjct: 134 YIATGHYARRG 144


>gi|242077782|ref|XP_002448827.1| hypothetical protein SORBIDRAFT_06g033930 [Sorghum bicolor]
 gi|241940010|gb|EES13155.1| hypothetical protein SORBIDRAFT_06g033930 [Sorghum bicolor]
          Length = 545

 Score = 42.6 bits (98), Expect = 0.045,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 16/43 (37%), Gaps = 1/43 (2%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELEC 52
            +   SGG DS+   +       DR+  +  D G     E E 
Sbjct: 241 VICALSGGVDSTVAATLVHKAIGDRLHCVFVDNGLLRYKERER 283


>gi|226295086|gb|EEH50506.1| GMP synthase [Paracoccidioides brasiliensis Pb18]
          Length = 548

 Score = 42.6 bits (98), Expect = 0.045,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 54/196 (27%), Gaps = 13/196 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
             ++ +    +   SGG DS+       +   DR   +  D G          L + +  
Sbjct: 229 RKLVGEKGQVIGAVSGGVDSTVAAKLMKEAIGDRFHAVLVDNG---------VLRLNEAA 279

Query: 61  VELMPKWKDSLGEDHILPLA--ILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
           +      +       ++  +   LG +           K+  N     F      I    
Sbjct: 280 IVKETLTRHLGVNLTVVDASERFLGKLKGIKDDPERKRKVIGNTFIEVFQEEAKKIAAAA 339

Query: 119 AATLAYRLGITNIV-IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
             +         +      +   S        TI+       L    H+ +  PL  L K
Sbjct: 340 KGSHNEGEIEWLLQGTLYPDVIESISFKGPSATIKTHHNVGGLLEGMHLKLIEPLRELFK 399

Query: 178 YETWKLAQDIGGQDLV 193
            E  +L   +G  + +
Sbjct: 400 DEVRELGVQLGIPEEL 415


>gi|183597578|ref|ZP_02959071.1| hypothetical protein PROSTU_00861 [Providencia stuartii ATCC 25827]
 gi|188023075|gb|EDU61115.1| hypothetical protein PROSTU_00861 [Providencia stuartii ATCC 25827]
          Length = 450

 Score = 42.6 bits (98), Expect = 0.045,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 36/124 (29%), Gaps = 11/124 (8%)

Query: 10  SALLLFSGGQDSSTCLSWA--LDRFD----RVETLSFDYGQRNKVELECRLCVRKKIVEL 63
             L+ FSGG DS+  L     + ++      +  +   +G   + +     C       L
Sbjct: 21  KILVGFSGGVDSTVLLHALYQIKKYQLPSLEIRAIHIHHGLNVRADDWEAHCQ-----HL 75

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
             +W       H+        I  ++          +          +++        LA
Sbjct: 76  CEQWHIPFVCTHVTVDPSNRGIEAAAREARYQAYRNELAEGEIIATAQHLDDQAETFMLA 135

Query: 124 YRLG 127
            + G
Sbjct: 136 LKRG 139


>gi|167764470|ref|ZP_02436591.1| hypothetical protein BACSTE_02854 [Bacteroides stercoris ATCC
           43183]
 gi|167697139|gb|EDS13718.1| hypothetical protein BACSTE_02854 [Bacteroides stercoris ATCC
           43183]
          Length = 569

 Score = 42.6 bits (98), Expect = 0.045,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 45/187 (24%), Gaps = 14/187 (7%)

Query: 13  LLFSGGQDSSTCLSWALD-RFDRVET----------LS-FDYGQRNKVELECRLCVRKKI 60
           +L SGG DSS   + A      R+ET          L  F  G +   +L     V + I
Sbjct: 245 VLLSGGLDSSVISAIAKKYAGKRIETDNKADAWWPQLHSFAVGLKGAPDLIKAREVAQYI 304

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  +      ++ +  +  +     +     V        L          + L    
Sbjct: 305 GTIHHEIN-YTIQEGLDAIRDVIYFIETYDVTTVRASTPMYLLARVIKSMGIKMVLSGEG 363

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
                 G                   R  +   +   +              +     E 
Sbjct: 364 AD-EVFGGYLYFHKAPTPQAFHEETVRKLSKLYLYDCLRANKSLAAWGVEGRVPFLDKEF 422

Query: 181 WKLAQDI 187
             +A  +
Sbjct: 423 LDVAMRL 429


>gi|83952132|ref|ZP_00960864.1| GMP synthase [Roseovarius nubinhibens ISM]
 gi|83837138|gb|EAP76435.1| GMP synthase [Roseovarius nubinhibens ISM]
          Length = 523

 Score = 42.6 bits (98), Expect = 0.045,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 55/184 (29%), Gaps = 17/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS       +   D++  +  D+G    + L     V K   +     
Sbjct: 226 KQVICGLSGGVDSSVAAVLIHEAIGDQLTCVFVDHG---LLRLNEADEVVKMFRD----- 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                  + +PL    +        +     +        +          +   A  L 
Sbjct: 278 ------HYNIPLIHADESELFLGELDGVSDPETKRKIIGRLFIDVFQKHANSIDGAEFLA 331

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   V E+    +      TI++      L  +  + +  PL  L K E   L +++
Sbjct: 332 QGTLYPDVIESV--SFSGGPSVTIKSHHNVGGLPEKMGLKLVEPLRELFKDEVRALGREL 389

Query: 188 GGQD 191
           G  D
Sbjct: 390 GLPD 393


>gi|320334242|ref|YP_004170953.1| GMP synthase [Deinococcus maricopensis DSM 21211]
 gi|319755531|gb|ADV67288.1| GMP synthase (glutamine-hydrolyzing) [Deinococcus maricopensis DSM
           21211]
          Length = 508

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 53/186 (28%), Gaps = 20/186 (10%)

Query: 10  SALLLFSGGQDSSTC-LSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSST  L  A    +++  +  D+G     E E      + +   +    
Sbjct: 215 RVLLAISGGVDSSTLGLLLARAVGEKLTAVFIDHGLLRLGEREQVEAALRPLGVNLVTVD 274

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                        LG ++  S  +     I    +       R      F A        
Sbjct: 275 AR--------EQFLGALAGVSDPEQKRKIIGREFIRAFEREAREYGPFDFLA-------- 318

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                 +               I++      L  +    +  P   L K E  ++A+ +G
Sbjct: 319 ---QGTLYPDVIESAGGEGAANIKSHHNVGGLPDDLAFKLVEPFRTLFKDEVREIARLLG 375

Query: 189 GQDLVN 194
             D + 
Sbjct: 376 LPDHIR 381


>gi|319401761|gb|EFV89969.1| argininosuccinate synthase [Staphylococcus epidermidis FRI909]
          Length = 401

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
               +L +SGG D+S  + W +D+   V     D G
Sbjct: 1  MKDKIVLAYSGGLDTSVAVQWLIDKGYDVVACCLDVG 37


>gi|293368339|ref|ZP_06614967.1| argininosuccinate synthase [Staphylococcus epidermidis
          M23864:W2(grey)]
 gi|291317586|gb|EFE58004.1| argininosuccinate synthase [Staphylococcus epidermidis
          M23864:W2(grey)]
 gi|329734894|gb|EGG71194.1| argininosuccinate synthase [Staphylococcus epidermidis VCU045]
          Length = 401

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
               +L +SGG D+S  + W +D+   V     D G
Sbjct: 1  MKDKIVLAYSGGLDTSVAVQWLIDKGYDVVACCLDVG 37


>gi|242242251|ref|ZP_04796696.1| argininosuccinate synthase [Staphylococcus epidermidis W23144]
 gi|242234310|gb|EES36622.1| argininosuccinate synthase [Staphylococcus epidermidis W23144]
          Length = 401

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
               +L +SGG D+S  + W +D+   V     D G
Sbjct: 1  MKDKIVLAYSGGLDTSVAVQWLIDKGYDVVACCLDVG 37


>gi|207110156|ref|ZP_03244318.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Helicobacter pylori HPKX_438_CA4C1]
          Length = 82

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 9/70 (12%), Positives = 25/70 (35%), Gaps = 5/70 (7%)

Query: 2  NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS---FDYGQRNKVELECRLCVRK 58
          N+ +K      +L SGG DSS       ++   +  +        +++ + ++      +
Sbjct: 14 NERLKM--KIAVLLSGGVDSSYSAYSLKEQGHELVGIYLKLHASEKKHDLYIKNAQKACE 71

Query: 59 KIVELMPKWK 68
           +   +    
Sbjct: 72 FLGIPLEVLD 81


>gi|197334330|ref|YP_002155395.1| gmp synthase (glutamine-hydrolyzing) [Vibrio fischeri MJ11]
 gi|226739763|sp|B5FAY1|GUAA_VIBFM RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|197315820|gb|ACH65267.1| gmp synthase (glutamine-hydrolyzing) [Vibrio fischeri MJ11]
          Length = 517

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 50/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS     A     D++  +  D G     E                +  +
Sbjct: 222 VILGLSGGVDSSVVAMLAHRAIGDKLTCVFVDNGLLRLNE--------------ADQVME 267

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G    L +  +                +        V              A  L   
Sbjct: 268 MFGNKFGLNIIHVNAEQRFLDALEGESDPEVKRKIIGHVFVDIFDEESKKLKNAKWLAQG 327

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S     +   I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 328 TIYPDVIESAAS--KTGKAHVIKSHHNVGGLPDDMEMGLVEPLRELFKDEVRKIGLELGL 385

Query: 190 Q 190
            
Sbjct: 386 P 386


>gi|167044698|gb|ABZ09369.1| putative arginosuccinate synthase [uncultured marine
          microorganism HF4000_APKG7H23]
          Length = 401

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 4/64 (6%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           A   +L +SGG D+S  + W +D++   V TL+ D G    V+L+       +I  +  
Sbjct: 1  MADKIVLAYSGGLDTSVAIRWLMDQYSAEVVTLTVDLG---AVQLQDARERALQIGAVKA 57

Query: 66 KWKD 69
             D
Sbjct: 58 VVLD 61


>gi|167044658|gb|ABZ09329.1| putative arginosuccinate synthase [uncultured marine
          microorganism HF4000_APKG7H23]
          Length = 153

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 4/64 (6%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           A   +L +SGG D+S  + W +D++   V TL+ D G    V+L+       +I  +  
Sbjct: 1  MADKIVLAYSGGLDTSVAIRWLMDQYSAEVVTLTVDLG---AVQLQDARERALQIGAVKA 57

Query: 66 KWKD 69
             D
Sbjct: 58 VVLD 61


>gi|90418687|ref|ZP_01226598.1| GMP synthase [Aurantimonas manganoxydans SI85-9A1]
 gi|90336767|gb|EAS50472.1| GMP synthase [Aurantimonas manganoxydans SI85-9A1]
          Length = 518

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 53/182 (29%), Gaps = 17/182 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS       +   D++  +  D+G     E         ++V +     
Sbjct: 222 KVICGLSGGVDSSVAAVLIHEAIGDQLTCIFVDHGLLRMNE-------ADEVVAMFR--- 271

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + + +PL  +             M  +        +              A  L  
Sbjct: 272 ----DHYNIPLVHVQAQDTFIDALEGEMDPEVKRKTIGRLFIETFEAEAKKIGGADFLAQ 327

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+    +      TI++      L    ++ +  PL  L K E   L  ++G
Sbjct: 328 GTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMNMQLVEPLRELFKDEVRLLGHELG 385

Query: 189 GQ 190
             
Sbjct: 386 LP 387


>gi|28198570|ref|NP_778884.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Xylella fastidiosa Temecula1]
 gi|182681251|ref|YP_001829411.1| tRNA-specific 2-thiouridylase MnmA [Xylella fastidiosa M23]
 gi|32130276|sp|Q87DM0|MNMA_XYLFT RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|205828984|sp|B2I9X8|MNMA_XYLF2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|28056654|gb|AAO28533.1| tRNA methyltransferase [Xylella fastidiosa Temecula1]
 gi|182631361|gb|ACB92137.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Xylella fastidiosa M23]
 gi|307579701|gb|ADN63670.1| tRNA-specific 2-thiouridylase MnmA [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 379

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 46/189 (24%), Gaps = 11/189 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             P  ++  SGG DSS        + + +  L       +          R+  V +   
Sbjct: 2   NTPRIIVAMSGGVDSSVAAWRLNSQREAIAGLFMRNWTDDGNGQCHAEEDRRDAVAVCGI 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   H    +   +      T  +A            +  R  I        A  L
Sbjct: 62  LG---IAFHFRDFS--HEYWQEVFTHFLAEYANGRTPNPDVLCNRE-IKFKHFLETAREL 115

Query: 127 GITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           G   I  G                    +         LG E       P+  L+K +  
Sbjct: 116 GADRIATGHYARIEHYRQRWHLLRGADRSKDQSYFLHQLGQEQLAATLFPIGDLEKQQLR 175

Query: 182 KLAQDIGGQ 190
           +LA   G  
Sbjct: 176 QLAHQTGLP 184


>gi|27467575|ref|NP_764212.1| argininosuccinate synthase [Staphylococcus epidermidis ATCC
          12228]
 gi|57866474|ref|YP_188140.1| argininosuccinate synthase [Staphylococcus epidermidis RP62A]
 gi|251810334|ref|ZP_04824807.1| argininosuccinate synthase [Staphylococcus epidermidis
          BCM-HMP0060]
 gi|282875540|ref|ZP_06284411.1| argininosuccinate synthase [Staphylococcus epidermidis SK135]
 gi|30172810|sp|Q8CPU3|ASSY_STAES RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|61211372|sp|Q5HQK0|ASSY_STAEQ RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|27315119|gb|AAO04254.1|AE016746_44 argininosuccinate synthase [Staphylococcus epidermidis ATCC
          12228]
 gi|57637132|gb|AAW53920.1| argininosuccinate synthase [Staphylococcus epidermidis RP62A]
 gi|251806142|gb|EES58799.1| argininosuccinate synthase [Staphylococcus epidermidis
          BCM-HMP0060]
 gi|281295567|gb|EFA88090.1| argininosuccinate synthase [Staphylococcus epidermidis SK135]
 gi|329730535|gb|EGG66923.1| argininosuccinate synthase [Staphylococcus epidermidis VCU144]
 gi|329737716|gb|EGG73959.1| argininosuccinate synthase [Staphylococcus epidermidis VCU028]
          Length = 401

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
               +L +SGG D+S  + W +D+   V     D G
Sbjct: 1  MKDKIVLAYSGGLDTSVAVQWLIDKGYDVVACCLDVG 37


>gi|330686299|gb|EGG97908.1| argininosuccinate synthase [Staphylococcus epidermidis VCU121]
          Length = 400

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
               +L +SGG D+S  + W +D+   V     D G
Sbjct: 1  MKEKIVLAYSGGLDTSVAVQWLIDKGYDVVACCLDVG 37


>gi|323440883|gb|EGA98591.1| argininosuccinate synthase [Staphylococcus aureus O11]
          Length = 401

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
               +L +SGG D+S  + W +D+   V     D G
Sbjct: 1  MKEKIVLAYSGGLDTSVAVQWLIDKGYDVVACCLDVG 37


>gi|315194493|gb|EFU24885.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          CGS00]
          Length = 401

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
               +L +SGG D+S  + W +D+   V     D G
Sbjct: 1  MKEKIVLAYSGGLDTSVAVQWLIDKGYDVVACCLDVG 37


>gi|314933173|ref|ZP_07840538.1| argininosuccinate synthase [Staphylococcus caprae C87]
 gi|313653323|gb|EFS17080.1| argininosuccinate synthase [Staphylococcus caprae C87]
          Length = 401

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
               +L +SGG D+S  + W +D+   V     D G
Sbjct: 1  MKEKIVLAYSGGLDTSVAVQWLIDKGYDVVACCLDVG 37


>gi|312134229|ref|YP_004001567.1| nad+ synthetase [Caldicellulosiruptor owensensis OL]
 gi|311774280|gb|ADQ03767.1| NAD+ synthetase [Caldicellulosiruptor owensensis OL]
          Length = 540

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 17/147 (11%), Positives = 38/147 (25%), Gaps = 2/147 (1%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIVELMP 65
              A++  SGG DSS     A++   +   L      R   E   +    + + +     
Sbjct: 285 TKKAVVGLSGGIDSSVVCCLAVEALGKENVLGVAMPSRYSSEHSLKDARKLAENLGIEFR 344

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            +         L +    +++   L +         N+        N + L         
Sbjct: 345 VYSIEEPFKAYLRMFNGSEVALQDLAEENIQARIRGNILMFISNRENRLVLTTGNKSELA 404

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIR 152
           +G   +   +           +     
Sbjct: 405 VGYCTLYGDMAGGLAVISDLPKMLVYE 431


>gi|298694200|gb|ADI97422.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          ED133]
          Length = 401

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
               +L +SGG D+S  + W +D+   V     D G
Sbjct: 1  MKEKIVLAYSGGLDTSVAVQWLIDKGYDVVACCLDVG 37


>gi|293376142|ref|ZP_06622388.1| asparagine synthase (glutamine-hydrolyzing) [Turicibacter sanguinis
           PC909]
 gi|292645215|gb|EFF63279.1| asparagine synthase (glutamine-hydrolyzing) [Turicibacter sanguinis
           PC909]
          Length = 602

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 34/132 (25%), Gaps = 6/132 (4%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS   + A +    + T S DY    K   +    V +    +           
Sbjct: 258 LSGGLDSSIITAIAANEMKNLHTFSIDYEDNRKYFQKTAFTVSEDNDFIKLMSDRFHTNH 317

Query: 75  H--ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP----GRNIIFLVFAATLAYRLGI 128
           H  ++    L D    ++       + D +    +          + L          G 
Sbjct: 318 HYCVITNQDLADALKDAVLLRDMPGMADVDSSLHWFCKEIKKDFTVGLSGECADEIFGGY 377

Query: 129 TNIVIGVCETDY 140
                      +
Sbjct: 378 PWFYREPMNGMF 389


>gi|283470160|emb|CAQ49371.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          ST398]
          Length = 401

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
               +L +SGG D+S  + W +D+   V     D G
Sbjct: 1  MKEKIVLAYSGGLDTSVAVQWLIDKGYDVVACCLDVG 37


>gi|282850275|ref|ZP_06259654.1| conserved hypothetical protein TIGR00268 [Veillonella parvula ATCC
           17745]
 gi|282579768|gb|EFB85172.1| conserved hypothetical protein TIGR00268 [Veillonella parvula ATCC
           17745]
          Length = 248

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 37/114 (32%), Gaps = 12/114 (10%)

Query: 1   MN--DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           MN  + ++      +  SGG DS+     A       +     Y  +++   +  L   K
Sbjct: 1   MNLIEYLRSFDKIAIALSGGVDSTYLAYAAKQSGVLCKA----YTVKSQFVPQFELEDAK 56

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN 112
           K+ EL+           I+ + +L     +S   N     + +         R 
Sbjct: 57  KVAELIDI------SLKIIDIDVLEYDDITSNPSNRCYYCKYHVFSTISEHARR 104


>gi|282916211|ref|ZP_06323973.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          D139]
 gi|283770026|ref|ZP_06342918.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          H19]
 gi|282319651|gb|EFB49999.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          D139]
 gi|283460173|gb|EFC07263.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          H19]
 gi|323443826|gb|EGB01438.1| argininosuccinate synthase [Staphylococcus aureus O46]
          Length = 401

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
               +L +SGG D+S  + W +D+   V     D G
Sbjct: 1  MKEKIVLAYSGGLDTSVAVQWLIDKGYDVVACCLDVG 37


>gi|258441530|ref|ZP_05690890.1| argininosuccinate synthase [Staphylococcus aureus A8115]
 gi|282893988|ref|ZP_06302219.1| argininosuccinate synthase [Staphylococcus aureus A8117]
 gi|257852320|gb|EEV76246.1| argininosuccinate synthase [Staphylococcus aureus A8115]
 gi|282763474|gb|EFC03603.1| argininosuccinate synthase [Staphylococcus aureus A8117]
          Length = 401

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
               +L +SGG D+S  + W +D+   V     D G
Sbjct: 1  MKEKIVLAYSGGLDTSVAVQWLIDKGYDVVACCLDVG 37


>gi|258424352|ref|ZP_05687232.1| argininosuccinate synthase [Staphylococcus aureus A9635]
 gi|257845365|gb|EEV69399.1| argininosuccinate synthase [Staphylococcus aureus A9635]
          Length = 401

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
               +L +SGG D+S  + W +D+   V     D G
Sbjct: 1  MKEKIVLAYSGGLDTSVAVQWLIDKGYDVVACCLDVG 37


>gi|253732683|ref|ZP_04866848.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          TCH130]
 gi|253729294|gb|EES98023.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          TCH130]
 gi|329733968|gb|EGG70290.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          21193]
          Length = 401

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
               +L +SGG D+S  + W +D+   V     D G
Sbjct: 1  MKEKIVLAYSGGLDTSVAVQWLIDKGYDVVACCLDVG 37


>gi|242373128|ref|ZP_04818702.1| argininosuccinate synthase [Staphylococcus epidermidis M23864:W1]
 gi|242349282|gb|EES40883.1| argininosuccinate synthase [Staphylococcus epidermidis M23864:W1]
          Length = 401

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
               +L +SGG D+S  + W +D+   V     D G
Sbjct: 1  MKEKIVLAYSGGLDTSVAVQWLIDKGYDVVACCLDVG 37


>gi|239636512|ref|ZP_04677514.1| argininosuccinate synthase [Staphylococcus warneri L37603]
 gi|239597867|gb|EEQ80362.1| argininosuccinate synthase [Staphylococcus warneri L37603]
          Length = 400

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
               +L +SGG D+S  + W +D+   V     D G
Sbjct: 1  MKEKIVLAYSGGLDTSVAVQWLIDKGYDVVACCLDVG 37


>gi|223042875|ref|ZP_03612923.1| argininosuccinate synthase [Staphylococcus capitis SK14]
 gi|222443729|gb|EEE49826.1| argininosuccinate synthase [Staphylococcus capitis SK14]
          Length = 401

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
               +L +SGG D+S  + W +D+   V     D G
Sbjct: 1  MKEKIVLAYSGGLDTSVAVQWLIDKGYDVVACCLDVG 37


>gi|224476062|ref|YP_002633668.1| argininosuccinate synthase [Staphylococcus carnosus subsp.
          carnosus TM300]
 gi|254807532|sp|B9DIU4|ASSY_STACT RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|222420669|emb|CAL27483.1| putative argininosuccinate synthase [Staphylococcus carnosus
          subsp. carnosus TM300]
          Length = 401

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
               +L +SGG D+S  + W +D+   V     D G
Sbjct: 1  MKEKIVLAYSGGLDTSVAVQWLIDKGYDVVACCLDVG 37


>gi|195652181|gb|ACG45558.1| tRNA methyltransferase [Zea mays]
          Length = 486

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 47/188 (25%), Gaps = 12/188 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS  L        R          +         C   + ++      D
Sbjct: 76  RVAVLVSGGVDSSVALRLLHAAGHRCTAFYLKIWFQEDFRNFWSECPWDEDLKYAQAVCD 135

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +     +    L D   + +  ++  + +    PN  V     I           LG  
Sbjct: 136 KIDVPLEVV--HLSDEYWNHVVSHMINEYRCGRTPNPDVLCNTRIKFGSFLEAIENLGFD 193

Query: 130 NIVIGVCETDYSGYPDCR----------HDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
            I  G          +                       +L       +  PL  + K E
Sbjct: 194 YIASGHYAHVVHPSAENTEAPSVLQLSKDKIKDQTYFLSHLSQSQLRRLLFPLGCITKDE 253

Query: 180 TWKLAQDI 187
             +LA  +
Sbjct: 254 VRRLATQM 261


>gi|157144560|ref|YP_001451879.1| GMP synthase [Citrobacter koseri ATCC BAA-895]
 gi|226738420|sp|A8AD80|GUAA_CITK8 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|157081765|gb|ABV11443.1| hypothetical protein CKO_00280 [Citrobacter koseri ATCC BAA-895]
          Length = 525

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 48/183 (26%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVMDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +      F                    
Sbjct: 285 IVHVPAEERFLTALKGENDPEAKRKIIGRVFVEVFDEEAFRLEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|115437102|ref|XP_001217726.1| GMP synthase [Aspergillus terreus NIH2624]
 gi|114188541|gb|EAU30241.1| GMP synthase [Aspergillus terreus NIH2624]
          Length = 542

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 54/188 (28%), Gaps = 6/188 (3%)

Query: 9   PSALLL--FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
             AL+L   SGG DS+   +       DR + +  D G     E      V++ + E + 
Sbjct: 230 ERALVLGAVSGGVDSTVGAALMKAAIGDRFKAILIDNGCMRLNE---CEQVKQTLGEHLG 286

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                +    +    + G        K +     D          +       +  + + 
Sbjct: 287 INLTVVDAGDLFLGRLAGVSDPEKKRKIIGSTFIDLFEQEAIRIEKEAENTPNSGKVEWF 346

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           L  T     +    + G                 +     + +  PL  L K E   + +
Sbjct: 347 LQGTLYPDVIESLSFRGPSATIKTHHNVGGLPERMMNGQGLRLIEPLRLLFKDEVRAIGR 406

Query: 186 DIGGQDLV 193
            +G  + +
Sbjct: 407 QLGIHESL 414


>gi|78779771|ref|YP_397883.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prochlorococcus marinus str. MIT 9312]
 gi|123768944|sp|Q319J8|MNMA_PROM9 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|78713270|gb|ABB50447.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prochlorococcus marinus str. MIT 9312]
          Length = 385

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 52/192 (27%), Gaps = 21/192 (10%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++  SGG DSS   +  ++    VE L+        +      C  + +V+     +D  
Sbjct: 27  IVGLSGGVDSSLSAALLVESGWDVEGLTL------WLMKGQGSCCSEGLVDAAGLCEDLG 80

Query: 72  GEDHILPLAIL---------------GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
               I+    +               G         N  +K ++             I  
Sbjct: 81  INHKIIDSREIFEREVIKKTTEGYEKGFTPLPCSMCNKNVKFEEMLNYAINKKDFTHIAT 140

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
              A +        +                 +         +L  E    +  PL  +K
Sbjct: 141 GHYARIKKSSYAETLDYKSFVFKDFLLLRGTDENKDQSYFLYSLSQEVLSRLVFPLGEMK 200

Query: 177 KYETWKLAQDIG 188
           K ET K A  +G
Sbjct: 201 KEETRKEALRLG 212


>gi|82750577|ref|YP_416318.1| argininosuccinate synthase [Staphylococcus aureus RF122]
 gi|119361328|sp|Q2YWS4|ASSY_STAAB RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|82656108|emb|CAI80517.1| argininosuccinate synthase [Staphylococcus aureus RF122]
          Length = 401

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
               +L +SGG D+S  + W +D+   V     D G
Sbjct: 1  MKEKIVLAYSGGLDTSVAVQWLIDKGYDVVACCLDVG 37


>gi|49483121|ref|YP_040345.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          MRSA252]
 gi|257425010|ref|ZP_05601437.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          55/2053]
 gi|257427676|ref|ZP_05604075.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          65-1322]
 gi|257430311|ref|ZP_05606694.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          68-397]
 gi|257433008|ref|ZP_05609368.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          E1410]
 gi|257435912|ref|ZP_05611960.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          M876]
 gi|282903498|ref|ZP_06311389.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          C160]
 gi|282905276|ref|ZP_06313133.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          Btn1260]
 gi|282908256|ref|ZP_06316087.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          WW2703/97]
 gi|282910537|ref|ZP_06318341.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          WBG10049]
 gi|282913733|ref|ZP_06321522.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          M899]
 gi|282918659|ref|ZP_06326396.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          C427]
 gi|282923649|ref|ZP_06331329.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          C101]
 gi|283957699|ref|ZP_06375152.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          A017934/97]
 gi|293500775|ref|ZP_06666626.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          58-424]
 gi|293509726|ref|ZP_06668437.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          M809]
 gi|293524313|ref|ZP_06671000.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          M1015]
 gi|295427444|ref|ZP_06820079.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          EMRSA16]
 gi|297590196|ref|ZP_06948835.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          MN8]
 gi|56748595|sp|Q6GIC7|ASSY_STAAR RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|49241250|emb|CAG39929.1| putative argininosuccinate synthase [Staphylococcus aureus subsp.
          aureus MRSA252]
 gi|257272580|gb|EEV04703.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          55/2053]
 gi|257275869|gb|EEV07342.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          65-1322]
 gi|257279088|gb|EEV09699.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          68-397]
 gi|257282423|gb|EEV12558.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          E1410]
 gi|257285103|gb|EEV15222.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          M876]
 gi|282314517|gb|EFB44907.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          C101]
 gi|282317793|gb|EFB48165.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          C427]
 gi|282322765|gb|EFB53087.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          M899]
 gi|282325929|gb|EFB56237.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          WBG10049]
 gi|282327921|gb|EFB58203.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          WW2703/97]
 gi|282331683|gb|EFB61195.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          Btn1260]
 gi|282596453|gb|EFC01414.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          C160]
 gi|283791150|gb|EFC29965.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          A017934/97]
 gi|290921276|gb|EFD98337.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          M1015]
 gi|291095780|gb|EFE26041.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          58-424]
 gi|291467823|gb|EFF10338.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          M809]
 gi|295128832|gb|EFG58463.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          EMRSA16]
 gi|297576495|gb|EFH95210.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          MN8]
 gi|312438676|gb|ADQ77747.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          TCH60]
          Length = 401

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
               +L +SGG D+S  + W +D+   V     D G
Sbjct: 1  MKEKIVLAYSGGLDTSVAVQWLIDKGYDVVACCLDVG 37


>gi|21282572|ref|NP_645660.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          MW2]
 gi|49485737|ref|YP_042958.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          MSSA476]
 gi|297208404|ref|ZP_06924834.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          ATCC 51811]
 gi|300912480|ref|ZP_07129923.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          TCH70]
 gi|24211483|sp|Q8NXF2|ASSY_STAAW RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|56748583|sp|Q6GAW5|ASSY_STAAS RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|21204010|dbj|BAB94708.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          MW2]
 gi|49244180|emb|CAG42606.1| putative argininosuccinate synthase [Staphylococcus aureus subsp.
          aureus MSSA476]
 gi|296887143|gb|EFH26046.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          ATCC 51811]
 gi|300886726|gb|EFK81928.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          TCH70]
          Length = 401

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
               +L +SGG D+S  + W +D+   V     D G
Sbjct: 1  MKEKIVLAYSGGLDTSVAVQWLIDKGYDVVACCLDVG 37


>gi|194336464|ref|YP_002018258.1| Argininosuccinate synthase [Pelodictyon phaeoclathratiforme BU-1]
 gi|229889884|sp|B4S9U5|ASSY_PELPB RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|194308941|gb|ACF43641.1| Argininosuccinate synthase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 400

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 2/54 (3%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVR 57
          + K   A+  +SGG D+S  + W  D++D  +  ++ + GQ+ ++E      + 
Sbjct: 1  MSKEKIAIA-YSGGLDTSIMIKWLKDKYDAEIVAVTGNLGQQKEIENLESKAIA 53


>gi|119357136|ref|YP_911780.1| argininosuccinate synthase [Chlorobium phaeobacteroides DSM 266]
 gi|166219960|sp|A1BG29|ASSY_CHLPD RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|119354485|gb|ABL65356.1| argininosuccinate synthase [Chlorobium phaeobacteroides DSM 266]
          Length = 400

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 2/54 (3%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVR 57
          + K   A+  +SGG D+S  + W  D++D  +  ++ + GQ+ ++E      + 
Sbjct: 1  MSKEKIAIA-YSGGLDTSIMIKWLKDKYDAEIVAVTGNLGQQKEIENLESKAIA 53


>gi|15923951|ref|NP_371485.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          Mu50]
 gi|15926550|ref|NP_374083.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          N315]
 gi|57651652|ref|YP_185833.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          COL]
 gi|87160547|ref|YP_493564.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          USA300_FPR3757]
 gi|88194656|ref|YP_499452.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          NCTC 8325]
 gi|148267395|ref|YP_001246338.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          JH9]
 gi|150393448|ref|YP_001316123.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          JH1]
 gi|151221044|ref|YP_001331866.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          str. Newman]
 gi|156979287|ref|YP_001441546.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          Mu3]
 gi|161509161|ref|YP_001574820.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          USA300_TCH1516]
 gi|221142107|ref|ZP_03566600.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          str. JKD6009]
 gi|253316122|ref|ZP_04839335.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          str. CF-Marseille]
 gi|253731569|ref|ZP_04865734.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          USA300_TCH959]
 gi|255005751|ref|ZP_05144352.2| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          Mu50-omega]
 gi|257795304|ref|ZP_05644283.1| argininosuccinate synthase [Staphylococcus aureus A9781]
 gi|258406953|ref|ZP_05680106.1| argininosuccinate synthase [Staphylococcus aureus A9763]
 gi|258421921|ref|ZP_05684842.1| argininosuccinate synthase [Staphylococcus aureus A9719]
 gi|258435318|ref|ZP_05689057.1| argininosuccinate synthase [Staphylococcus aureus A9299]
 gi|258447229|ref|ZP_05695378.1| argininosuccinate synthase [Staphylococcus aureus A6300]
 gi|258449989|ref|ZP_05698087.1| argininosuccinate synthase [Staphylococcus aureus A6224]
 gi|258452087|ref|ZP_05700103.1| argininosuccinate synthase [Staphylococcus aureus A5948]
 gi|258455502|ref|ZP_05703461.1| argininosuccinate synthase [Staphylococcus aureus A5937]
 gi|262049312|ref|ZP_06022186.1| argininosuccinate synthase [Staphylococcus aureus D30]
 gi|262052159|ref|ZP_06024367.1| argininosuccinate synthase [Staphylococcus aureus 930918-3]
 gi|269202576|ref|YP_003281845.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          ED98]
 gi|282922241|ref|ZP_06329936.1| argininosuccinate synthase [Staphylococcus aureus A9765]
 gi|282927184|ref|ZP_06334806.1| argininosuccinate synthase [Staphylococcus aureus A10102]
 gi|284023888|ref|ZP_06378286.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          132]
 gi|294847949|ref|ZP_06788696.1| argininosuccinate synthase [Staphylococcus aureus A9754]
 gi|295405767|ref|ZP_06815576.1| argininosuccinate synthase [Staphylococcus aureus A8819]
 gi|296276173|ref|ZP_06858680.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          MR1]
 gi|297245358|ref|ZP_06929229.1| argininosuccinate synthase [Staphylococcus aureus A8796]
 gi|304381485|ref|ZP_07364135.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          ATCC BAA-39]
 gi|54036773|sp|P63645|ASSY_STAAN RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|54040842|sp|P63644|ASSY_STAAM RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|61211370|sp|Q5HHC4|ASSY_STAAC RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|119361326|sp|Q2FIB4|ASSY_STAA3 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|119361327|sp|Q2FZU1|ASSY_STAA8 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|166221023|sp|A7X0H5|ASSY_STAA1 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|172048808|sp|A6QFH2|ASSY_STAAE RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|189046676|sp|A6U068|ASSY_STAA2 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|189081215|sp|A5IRD9|ASSY_STAA9 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|189081216|sp|A8Z067|ASSY_STAAT RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|13700765|dbj|BAB42061.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          N315]
 gi|14246730|dbj|BAB57123.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          Mu50]
 gi|57285838|gb|AAW37932.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          COL]
 gi|87126521|gb|ABD21035.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          USA300_FPR3757]
 gi|87202214|gb|ABD30024.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          NCTC 8325]
 gi|147740464|gb|ABQ48762.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          JH9]
 gi|149945900|gb|ABR51836.1| Argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          JH1]
 gi|150373844|dbj|BAF67104.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          str. Newman]
 gi|156721422|dbj|BAF77839.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          Mu3]
 gi|160367970|gb|ABX28941.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          USA300_TCH1516]
 gi|253724812|gb|EES93541.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          USA300_TCH959]
 gi|257789276|gb|EEV27616.1| argininosuccinate synthase [Staphylococcus aureus A9781]
 gi|257841492|gb|EEV65933.1| argininosuccinate synthase [Staphylococcus aureus A9763]
 gi|257842254|gb|EEV66682.1| argininosuccinate synthase [Staphylococcus aureus A9719]
 gi|257848979|gb|EEV72962.1| argininosuccinate synthase [Staphylococcus aureus A9299]
 gi|257853977|gb|EEV76931.1| argininosuccinate synthase [Staphylococcus aureus A6300]
 gi|257856909|gb|EEV79812.1| argininosuccinate synthase [Staphylococcus aureus A6224]
 gi|257860302|gb|EEV83134.1| argininosuccinate synthase [Staphylococcus aureus A5948]
 gi|257862320|gb|EEV85089.1| argininosuccinate synthase [Staphylococcus aureus A5937]
 gi|259159978|gb|EEW45014.1| argininosuccinate synthase [Staphylococcus aureus 930918-3]
 gi|259162544|gb|EEW47112.1| argininosuccinate synthase [Staphylococcus aureus D30]
 gi|262074866|gb|ACY10839.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          ED98]
 gi|269940463|emb|CBI48840.1| putative argininosuccinate synthase [Staphylococcus aureus subsp.
          aureus TW20]
 gi|282590873|gb|EFB95948.1| argininosuccinate synthase [Staphylococcus aureus A10102]
 gi|282593531|gb|EFB98525.1| argininosuccinate synthase [Staphylococcus aureus A9765]
 gi|285816640|gb|ADC37127.1| Argininosuccinate synthase [Staphylococcus aureus 04-02981]
 gi|294824749|gb|EFG41171.1| argininosuccinate synthase [Staphylococcus aureus A9754]
 gi|294969202|gb|EFG45222.1| argininosuccinate synthase [Staphylococcus aureus A8819]
 gi|297177661|gb|EFH36911.1| argininosuccinate synthase [Staphylococcus aureus A8796]
 gi|302332574|gb|ADL22767.1| putative argininosuccinate synthase [Staphylococcus aureus subsp.
          aureus JKD6159]
 gi|302750789|gb|ADL64966.1| putative argininosuccinate synthase [Staphylococcus aureus subsp.
          aureus str. JKD6008]
 gi|304339848|gb|EFM05792.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          ATCC BAA-39]
 gi|312829358|emb|CBX34200.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          ECT-R 2]
 gi|315130458|gb|EFT86445.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          CGS03]
 gi|315197314|gb|EFU27652.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          CGS01]
 gi|320141222|gb|EFW33069.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          MRSA131]
 gi|320143279|gb|EFW35069.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          MRSA177]
 gi|329313629|gb|AEB88042.1| Argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          T0131]
 gi|329726266|gb|EGG62736.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          21189]
 gi|329728162|gb|EGG64601.1| argininosuccinate synthase [Staphylococcus aureus subsp. aureus
          21172]
          Length = 401

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
               +L +SGG D+S  + W +D+   V     D G
Sbjct: 1  MKEKIVLAYSGGLDTSVAVQWLIDKGYDVVACCLDVG 37


>gi|332638409|ref|ZP_08417272.1| GMP synthase [Weissella cibaria KACC 11862]
          Length = 517

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++ ++  D+G   K E      V   +       
Sbjct: 223 KKVLLGLSGGVDSSVVGVLLQRAIGDQLTSIFVDHGLLRKNE---ADEVMAALGGKFGLN 279

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       L  L  ++     + +                 N    VF    A   G
Sbjct: 280 IIKVDAQERF-LTKLAGVTDPEQKRKI---------------IGNEFIRVFDEEAAKLDG 323

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G   TD          TI++      L  +    +  PL  L K E   L + +
Sbjct: 324 IDFLAQGTLYTDVIESGTDTAQTIKSHHNVGGLPEDMQFQLIEPLNTLFKDEVRALGEKL 383

Query: 188 GGQDLV 193
           G    +
Sbjct: 384 GMPHEL 389


>gi|325845310|ref|ZP_08168613.1| asparagine synthase (glutamine-hydrolyzing) [Turicibacter sp. HGF1]
 gi|325488671|gb|EGC91077.1| asparagine synthase (glutamine-hydrolyzing) [Turicibacter sp. HGF1]
          Length = 602

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 36/132 (27%), Gaps = 6/132 (4%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DSS   + A +    + T S DY    K   +    V +    +           
Sbjct: 258 LSGGLDSSIITAIAANEMKNLHTFSIDYEDNRKYFQKTAFTVSEDNDFIKLMSDRFHTNH 317

Query: 75  H---ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFV---PGRNIIFLVFAATLAYRLGI 128
           H   I    +   +  + L +++      ++  + F         + L          G 
Sbjct: 318 HYCVITNQDLADALKDAVLLRDMPGMADVDSSLHWFCKEIKKDFTVGLSGECADEIFGGY 377

Query: 129 TNIVIGVCETDY 140
                      +
Sbjct: 378 PWFYREPMNGMF 389


>gi|313205696|ref|YP_004044873.1| asparagine synthase (glutamine-hydrolyzing) [Riemerella
           anatipestifer DSM 15868]
 gi|312445012|gb|ADQ81367.1| asparagine synthase (glutamine-hydrolyzing) [Riemerella
           anatipestifer DSM 15868]
 gi|315022586|gb|EFT35612.1| asparagine synthetase B [Riemerella anatipestifer RA-YM]
 gi|325336861|gb|ADZ13135.1| Asparagine synthase (glutamine-hydrolyzing) [Riemerella
           anatipestifer RA-GD]
          Length = 556

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 57/198 (28%), Gaps = 18/198 (9%)

Query: 13  LLFSGGQDSSTCLSWALDR--------------FDRVETLSFDYGQRNKVELECRLCVRK 58
           +L SGG DSS   + A                 + ++   SF  G     +L+    V K
Sbjct: 232 VLLSGGLDSSITSAIAKKYAAKRIETDDQSEAWYPQLH--SFAVGLEGSPDLKAAKEVAK 289

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
            I  +  + K ++ E       ++  +    +T   A       +          + L  
Sbjct: 290 HIGTIHHEIKFTIQEGLDAIRDVIYYLETYDITTVRASTPM-YLMARVIKSMGIKMVLSG 348

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
             +     G           ++      + D +   +            +   + +L K 
Sbjct: 349 EGSDELFGGYLYFHKAPNAEEFHNETVRKLDKLYQYDCLRANKSLMAWGIEGRVPFLDK- 407

Query: 179 ETWKLAQDIGGQDLVNLI 196
           E   +A  I  +D +   
Sbjct: 408 EFMDVAMRINPKDKMVTP 425


>gi|150401052|ref|YP_001324818.1| argininosuccinate synthase [Methanococcus aeolicus Nankai-3]
 gi|150013755|gb|ABR56206.1| Argininosuccinate synthase [Methanococcus aeolicus Nankai-3]
          Length = 401

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 59/186 (31%), Gaps = 22/186 (11%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
            K   A+L +SGG D+S CL    + +  +V T   D GQ  + E+   +   K+     
Sbjct: 5   NKEKIAVLAYSGGLDTSCCLKLLEENYNYKVVTACVDVGQ-PEEEITKPVEKAKEYGVFA 63

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                     + +      + +   + + +         P +    R +I L     LA 
Sbjct: 64  ---------HYTIDAKE--EFAKEYIFRAIKANAIYEGYPLSTALARPLIGLKLVE-LAK 111

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            L    I  G        +        +A E  I   +          + L + E  + A
Sbjct: 112 ELNAEAISHGCTGKGNDQFRFESIMRAKAPEVKIIAPIRD--------LNLTRSEEIEYA 163

Query: 185 QDIGGQ 190
           +  G  
Sbjct: 164 KKHGIP 169


>gi|145630423|ref|ZP_01786204.1| pyridoxine kinase [Haemophilus influenzae R3021]
 gi|144984158|gb|EDJ91595.1| pyridoxine kinase [Haemophilus influenzae R3021]
          Length = 430

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 24/68 (35%), Gaps = 3/68 (4%)

Query: 12 LLLFSGGQDSSTCL---SWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
          L+  SGG DS+  L   +    +   ++ LS      +           K   +L  + +
Sbjct: 20 LIALSGGLDSTVLLSLFAKLRQKQPHLQPLSIRAIHIHHGLSPNADSWAKHCQDLCDQLQ 79

Query: 69 DSLGEDHI 76
            L  + +
Sbjct: 80 IPLIIERV 87


>gi|77165505|ref|YP_344030.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Nitrosococcus oceani ATCC 19707]
 gi|76883819|gb|ABA58500.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Nitrosococcus oceani ATCC 19707]
          Length = 391

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 31/151 (20%), Gaps = 5/151 (3%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             P  ++  SGG DSS        +      L          E EC   V +   +    
Sbjct: 26  NKPKVVVGLSGGVDSSVAALRLQQQGYPTSGLFMKNWVDFADESEC--TVAQDREDAQAV 83

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   H        +         +             +  R  I        A  L
Sbjct: 84  TSLLGISFH--EANFAMEYWDRVFHYFLEEYRLGRTPNPDILCNRE-IKFKTFLDHALAL 140

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETA 157
           G T I  G            R    R     
Sbjct: 141 GNTLIATGHYARIDQKEGRYRLLKGRDKNKD 171


>gi|45359153|ref|NP_988710.1| ExsB family protein [Methanococcus maripaludis S2]
 gi|45048028|emb|CAF31146.1| conserved hypothetical protein [Methanococcus maripaludis S2]
          Length = 261

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 38/135 (28%), Gaps = 22/135 (16%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K   A++ FSGG DS+T      +    +  ++     +  ++ +    + +        
Sbjct: 62  KKEKAVVAFSGGVDSTTS-IIVANNIFEICAVTVR--SKYIMDAKTEQSILE-------- 110

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             +SL   H      L             +     +         +          A + 
Sbjct: 111 LTNSLNISHEFIDVNLN-----------PIFEDTKSGKYHPCGRCHSTVEAEILNYAEKN 159

Query: 127 GITNIVIGVCETDYS 141
           GI  I+ G   +   
Sbjct: 160 GIKYIIYGDMLSIGH 174


>gi|14520469|ref|NP_125944.1| hypothetical protein PAB0172 [Pyrococcus abyssi GE5]
 gi|5457684|emb|CAB49175.1| Predicted subunit of tRNA(5-methylaminomethyl-2-thiouridylate)
           methyltransferase [Pyrococcus abyssi GE5]
          Length = 210

 Score = 42.6 bits (98), Expect = 0.046,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 41/145 (28%), Gaps = 4/145 (2%)

Query: 14  LFSGGQDSSTCLSWALDRFDRVETLSFDYG----QRNKVELECRLCVRKKIVELMPKWKD 69
           LFSGG+DSS            V  +   +G     +   E    L    ++VEL     +
Sbjct: 8   LFSGGKDSSLAAWILSKLGYEVTLVMVTFGVLDNWKYARETAKILGFEHEVVELPRNILE 67

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +     +        I +        +  +++    +    R+          A  L   
Sbjct: 68  NAVNMCLEDGRPTRAIQYIHEMALEYIASREDVERISDGTRRDDKVPFLDIRKARSLEDR 127

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAI 154
             V  +      GY   R    +  
Sbjct: 128 FNVAYIRPLLGLGYKTIRELVNKIF 152


>gi|332311498|gb|EGJ24593.1| GMP synthase [glutamine-hydrolyzing] [Listeria monocytogenes str.
           Scott A]
          Length = 518

 Score = 42.6 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 52/186 (27%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V   +       
Sbjct: 224 KKVLLALSGGVDSSVVGVLIHKAIGDQLTCIFVDHGLLRKGE---ADQVMATLQGEFNMN 280

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G         +   K +       +V       L     LA    
Sbjct: 281 IIKVDAKKRFMDKLAG-------VSDPEQKRKIIGNEFIYVFDDEANKLDGVEFLAQGTL 333

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            T+I+                 TI++      L  +    +  PL  L K E   L  ++
Sbjct: 334 YTDIIESGTA---------TAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGTEL 384

Query: 188 GGQDLV 193
           G  D +
Sbjct: 385 GMPDAI 390


>gi|315302615|ref|ZP_07873423.1| GMP synthase (glutamine-hydrolyzing) [Listeria ivanovii FSL F6-596]
 gi|313629015|gb|EFR97340.1| GMP synthase (glutamine-hydrolyzing) [Listeria ivanovii FSL F6-596]
          Length = 416

 Score = 42.6 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 52/186 (27%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V   +       
Sbjct: 224 KKVLLALSGGVDSSVVGVLIHKAIGDQLTCIFVDHGLLRKGE---ADQVMATLQGEFNMN 280

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G         +   K +       +V       L     LA    
Sbjct: 281 IIKVDAKKRFMDKLAG-------VSDPEQKRKIIGNEFIYVFDDEANKLDGVEFLAQGTL 333

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            T+I+                 TI++      L  +    +  PL  L K E   L  ++
Sbjct: 334 YTDIIESGTA---------TAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGTEL 384

Query: 188 GGQDLV 193
           G  D +
Sbjct: 385 GMPDAI 390


>gi|313624201|gb|EFR94264.1| GMP synthase (glutamine-hydrolyzing) [Listeria innocua FSL J1-023]
          Length = 514

 Score = 42.6 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 52/186 (27%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V   +       
Sbjct: 220 KKVLLALSGGVDSSVVGVLIHKAIGDQLTCIFVDHGLLRKGE---ADQVMATLQGEFNMN 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G         +   K +       +V       L     LA    
Sbjct: 277 IIKVDAKKRFMDKLAG-------VSDPEQKRKIIGNEFIYVFDDEANKLDGVEFLAQGTL 329

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            T+I+                 TI++      L  +    +  PL  L K E   L  ++
Sbjct: 330 YTDIIESGTA---------TAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGTEL 380

Query: 188 GGQDLV 193
           G  D +
Sbjct: 381 GMPDAI 386


>gi|313619458|gb|EFR91158.1| GMP synthase (glutamine-hydrolyzing) [Listeria innocua FSL S4-378]
          Length = 518

 Score = 42.6 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 52/186 (27%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V   +       
Sbjct: 224 KKVLLALSGGVDSSVVGVLIHKAIGDQLTCIFVDHGLLRKGE---ADQVMATLQGEFNMN 280

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G         +   K +       +V       L     LA    
Sbjct: 281 IIKVDAKKRFMDKLAG-------VSDPEQKRKIIGNEFIYVFDDEANKLDGVEFLAQGTL 333

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            T+I+                 TI++      L  +    +  PL  L K E   L  ++
Sbjct: 334 YTDIIESGTA---------TAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGTEL 384

Query: 188 GGQDLV 193
           G  D +
Sbjct: 385 GMPDAI 390


>gi|307570623|emb|CAR83802.1| GMP synthase [Listeria monocytogenes L99]
 gi|313609403|gb|EFR85008.1| GMP synthase (glutamine-hydrolyzing) [Listeria monocytogenes FSL
           F2-208]
          Length = 518

 Score = 42.6 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 52/186 (27%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V   +       
Sbjct: 224 KKVLLALSGGVDSSVVGVLIHKAIGDQLTCIFVDHGLLRKGE---ADQVMATLQGEFNMN 280

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G         +   K +       +V       L     LA    
Sbjct: 281 IIKVDAKKRFMDKLAG-------VSDPEQKRKIIGNEFIYVFDDEANKLDGVEFLAQGTL 333

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            T+I+                 TI++      L  +    +  PL  L K E   L  ++
Sbjct: 334 YTDIIESGTA---------TAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGTEL 384

Query: 188 GGQDLV 193
           G  D +
Sbjct: 385 GMPDAI 390


>gi|256840787|ref|ZP_05546295.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|298376612|ref|ZP_06986567.1| tRNA(Ile)-lysidine synthase [Bacteroides sp. 3_1_19]
 gi|256738059|gb|EEU51385.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|298266490|gb|EFI08148.1| tRNA(Ile)-lysidine synthase [Bacteroides sp. 3_1_19]
          Length = 438

 Score = 42.6 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 21/193 (10%), Positives = 54/193 (27%), Gaps = 23/193 (11%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
             ++ +    L+  SGG DS   L   +        L  ++  R +          +   
Sbjct: 12  YRLLSEDRPVLVGLSGGADSVALLGVLVRLGYPCIALHCNFHLRGEESDRDEAFACEFAE 71

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
            L           H +    +      +  +++++++    L   +           A  
Sbjct: 72  SLE-------VPFHKIDFDTIS----YAGERHLSIEMAARELRYAWFEEMRERLGGQATA 120

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           +A+        + +     +G         R            +  +  PL+ + + +  
Sbjct: 121 VAHHRDDNVETVLMNLIRGTGIRGMSGIRPR------------NGFIVRPLLCVSREDIL 168

Query: 182 KLAQDIGGQDLVN 194
               D G   +V+
Sbjct: 169 AWLADQGYAYMVD 181


>gi|256810563|ref|YP_003127932.1| subunit of tRNA(5-methylaminomethyl-2-thiouridylate)
          methyltransferase contains the PP-loop ATPase domain
          protein-like protein [Methanocaldococcus fervens AG86]
 gi|256793763|gb|ACV24432.1| subunit of tRNA(5-methylaminomethyl-2-thiouridylate)
          methyltransferase contains the PP-loop ATPase domain
          protein-like protein [Methanocaldococcus fervens AG86]
          Length = 197

 Score = 42.6 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYG--QRNKVELECRLCV--RKKIVELMPKWK 68
          +LFSGG+DSS               ++ ++G     K+  E    +  + KI+ L  K  
Sbjct: 5  VLFSGGKDSSLSAVILKKLGYNPNLITINFGVIPSYKLAEETAKILGFKHKIITLDRKIV 64

Query: 69 DSLGEDHI 76
          +   +  +
Sbjct: 65 EKAADMVV 72


>gi|226223707|ref|YP_002757814.1| GMP synthetase [Listeria monocytogenes Clip81459]
 gi|225876169|emb|CAS04875.1| Putative GMP synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
          Length = 518

 Score = 42.6 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 52/186 (27%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V   +       
Sbjct: 224 KKVLLALSGGVDSSVVGVLIHKAIGDQLTCIFVDHGLLRKGE---ADQVMATLQGEFNMN 280

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G         +   K +       +V       L     LA    
Sbjct: 281 IIKVDAKKRFMDKLAG-------VSDPEQKRKIIGNEFIYVFDDEANKLDGVEFLAQGTL 333

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            T+I+                 TI++      L  +    +  PL  L K E   L  ++
Sbjct: 334 YTDIIESGTA---------TAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGTEL 384

Query: 188 GGQDLV 193
           G  D +
Sbjct: 385 GMPDAI 390


>gi|224500529|ref|ZP_03668878.1| GMP synthase [Listeria monocytogenes Finland 1988]
          Length = 514

 Score = 42.6 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 52/186 (27%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V   +       
Sbjct: 220 KKVLLALSGGVDSSVVGVLIHKAIGDQLTCIFVDHGLLRKGE---ADQVMATLQGEFNMN 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G         +   K +       +V       L     LA    
Sbjct: 277 IIKVDAKKRFMDKLAG-------VSDPEQKRKIIGNEFIYVFDDEANKLDGVEFLAQGTL 329

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            T+I+                 TI++      L  +    +  PL  L K E   L  ++
Sbjct: 330 YTDIIESGTA---------TAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGTEL 380

Query: 188 GGQDLV 193
           G  D +
Sbjct: 381 GMPDAI 386


>gi|217964817|ref|YP_002350495.1| GMP synthase (glutamine-hydrolyzing) (Glutamineamidotransferase)
           (GMP synthetase) [Listeria monocytogenes HCC23]
 gi|290894354|ref|ZP_06557319.1| GMP synthase [Listeria monocytogenes FSL J2-071]
 gi|217334087|gb|ACK39881.1| GMP synthase (glutamine-hydrolyzing) (Glutamineamidotransferase)
           (GMP synthetase) [Listeria monocytogenes HCC23]
 gi|290556109|gb|EFD89658.1| GMP synthase [Listeria monocytogenes FSL J2-071]
          Length = 514

 Score = 42.6 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 52/186 (27%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V   +       
Sbjct: 220 KKVLLALSGGVDSSVVGVLIHKAIGDQLTCIFVDHGLLRKGE---ADQVMATLQGEFNMN 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G         +   K +       +V       L     LA    
Sbjct: 277 IIKVDAKKRFMDKLAG-------VSDPEQKRKIIGNEFIYVFDDEANKLDGVEFLAQGTL 329

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            T+I+                 TI++      L  +    +  PL  L K E   L  ++
Sbjct: 330 YTDIIESGTA---------TAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGTEL 380

Query: 188 GGQDLV 193
           G  D +
Sbjct: 381 GMPDAI 386


>gi|171920332|ref|ZP_02931673.1| tRNA(Ile)-lysidine synthetase [Ureaplasma parvum serovar 1 str.
           ATCC 27813]
 gi|171902755|gb|EDT49044.1| tRNA(Ile)-lysidine synthetase [Ureaplasma parvum serovar 1 str.
           ATCC 27813]
          Length = 330

 Score = 42.6 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 45/161 (27%), Gaps = 17/161 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECR-------------- 53
               L   SGG DS   L+    R  RV     +Y +R   + + +              
Sbjct: 14  NKKYLAAVSGGPDSMAMLNMY-KRNIRVVC-HVNYHKRESSDRDQQIVVDFCKKNNLIIE 71

Query: 54  -LCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN 112
            L V +K+ E      +   +  ++      +I      +N+ +    ++   T    R 
Sbjct: 72  ILDVDEKVYERYGHIDNFQTKARLIRYDFFKEIGKKYNIENLYIAHNFDDFLETAYMQRA 131

Query: 113 IIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRA 153
                    +     I  I++             R+     
Sbjct: 132 RQSKALFYGIKESNVINGIIVKRPVLFVRKQTLQRYCDENK 172


>gi|218895199|ref|YP_002443610.1| tRNA(Ile)-lysidine synthetase [Bacillus cereus G9842]
 gi|218545400|gb|ACK97794.1| tRNA(Ile)-lysidine synthetase [Bacillus cereus G9842]
          Length = 476

 Score = 42.6 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 22/197 (11%), Positives = 52/197 (26%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D++K   + ++  SGG DS   L + L++                          + +V 
Sbjct: 17  DVLKNDSTIVVGVSGGPDSLALLYYLLEK--------------------RAEKQLEIVVA 56

Query: 63  LMPKW--KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +      D   ED      +  ++     T  + +                     F  
Sbjct: 57  HVDHMFRGDESHEDLQFVQDLCEELGIICETIRINVSQYQQQYGMNAQVAARECRYAFLE 116

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKK 177
            +  +     + +G    D       R       +    + ++       +  PL+ + K
Sbjct: 117 RIMKKYDARYVALGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGYLIRPLLGVTK 176

Query: 178 YETWKLAQDIGGQDLVN 194
            E       +     ++
Sbjct: 177 EEIVDYCNKLNLIPRID 193


>gi|167758826|ref|ZP_02430953.1| hypothetical protein CLOSCI_01169 [Clostridium scindens ATCC 35704]
 gi|167663566|gb|EDS07696.1| hypothetical protein CLOSCI_01169 [Clostridium scindens ATCC 35704]
          Length = 641

 Score = 42.6 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 60/206 (29%), Gaps = 17/206 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFD-------RVETLSFDYGQRNKVELECRLCVRKK 59
           +A SA++  SGG DS+  L      FD        +  ++           +    + +K
Sbjct: 345 RAKSAVVGISGGLDSTLALLVTAKAFDALGMERKDIVAVTMPCFGTTDRTYQNACKMSRK 404

Query: 60  IVELMPKW-----KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII 114
           +   + +       +   +D    L        +S  +     + D       +      
Sbjct: 405 LGATLREIPIGASVEQHFKDIGHDLDDHSVTYENSQARERTQVLMDVANQAGGIVIGTGD 464

Query: 115 FLVFAATLAYRLGIT-NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV---TVHT 170
               A   A   G   ++         +      H    + E A    +   V    V  
Sbjct: 465 MSELALGWATYNGDHMSMYGVNASVPKTLVRHLVHYYADSCEDAELKAVLYDVLDTPVSP 524

Query: 171 PLMWLKKYETWKLAQDI-GGQDLVNL 195
            L+  K  E  +  +D+ G  +L + 
Sbjct: 525 ELLPPKDGEIAQKTEDLVGPYELHDF 550


>gi|297618568|ref|YP_003706673.1| GMP synthase, large subunit [Methanococcus voltae A3]
 gi|297618628|ref|YP_003706733.1| GMP synthase, large subunit [Methanococcus voltae A3]
 gi|297377545|gb|ADI35700.1| GMP synthase, large subunit [Methanococcus voltae A3]
 gi|297377605|gb|ADI35760.1| GMP synthase, large subunit [Methanococcus voltae A3]
          Length = 310

 Score = 42.6 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 56/187 (29%), Gaps = 26/187 (13%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS           + +  +  D G   K E E    + ++         
Sbjct: 23  KTIIALSGGVDSSVASVLVSKAVGENLLAVFVDTGLMRKNETEEIKKIFQE--------- 73

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +      ++    +     + +T     +          + GR  I +     +A   G 
Sbjct: 74  EMGVNLKVVYAKDMFLKELAGITDPEEKRK---------IIGRLFIEIFED--VAKENGE 122

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++ G              +        I L     + V  P+  L K E  ++A ++G
Sbjct: 123 EVLIQGTIA-----PDWIESEGEIKTHHNIALPSGMVLDVVEPIRELYKDEVRQVAVELG 177

Query: 189 GQDLVNL 195
             D V  
Sbjct: 178 LPDNVAF 184


>gi|254933199|ref|ZP_05266558.1| guaA [Listeria monocytogenes HPB2262]
 gi|293584758|gb|EFF96790.1| guaA [Listeria monocytogenes HPB2262]
          Length = 514

 Score = 42.6 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 52/186 (27%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V   +       
Sbjct: 220 KKVLLALSGGVDSSVVGVLIHKAIGDQLTCIFVDHGLLRKGE---ADQVMATLQGEFNMN 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G         +   K +       +V       L     LA    
Sbjct: 277 IIKVDAKKRFMDKLAG-------VSDPEQKRKIIGNEFIYVFDDEANKLDGVEFLAQGTL 329

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            T+I+                 TI++      L  +    +  PL  L K E   L  ++
Sbjct: 330 YTDIIESGTA---------TAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGTEL 380

Query: 188 GGQDLV 193
           G  D +
Sbjct: 381 GMPDAI 386


>gi|254828475|ref|ZP_05233162.1| bifunctional GMP synthase/glutamine amidotransferase [Listeria
           monocytogenes FSL N3-165]
 gi|258600870|gb|EEW14195.1| bifunctional GMP synthase/glutamine amidotransferase [Listeria
           monocytogenes FSL N3-165]
          Length = 514

 Score = 42.6 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 52/186 (27%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V   +       
Sbjct: 220 KKVLLALSGGVDSSVVGVLIHKAIGDQLTCIFVDHGLLRKGE---ADQVMATLQGEFNMN 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G         +   K +       +V       L     LA    
Sbjct: 277 IIKVDAKKRFMDKLAG-------VSDPEQKRKIIGNEFIYVFDDEANKLDGVEFLAQGTL 329

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            T+I+                 TI++      L  +    +  PL  L K E   L  ++
Sbjct: 330 YTDIIESGTA---------TAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGTEL 380

Query: 188 GGQDLV 193
           G  D +
Sbjct: 381 GMPDAI 386


>gi|150008036|ref|YP_001302779.1| putative cell-cycle protein [Parabacteroides distasonis ATCC 8503]
 gi|226695544|sp|A6LBU3|TILS_PARD8 RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|149936460|gb|ABR43157.1| putative cell-cycle protein [Parabacteroides distasonis ATCC 8503]
          Length = 438

 Score = 42.6 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 21/193 (10%), Positives = 54/193 (27%), Gaps = 23/193 (11%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
             ++ +    L+  SGG DS   L   +        L  ++  R +          +   
Sbjct: 12  YRLLSEDRPVLVGLSGGADSVALLGVLVRLGYPCIALHCNFHLRGEESDRDEAFACEFAE 71

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
            L           H +    +      +  +++++++    L   +           A  
Sbjct: 72  SLE-------VPFHKIDFDTIS----YAGERHLSIEMAARELRYAWFEEMRERLGGQATA 120

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           +A+        + +     +G         R            +  +  PL+ + + +  
Sbjct: 121 VAHHRDDNVETVLMNLIRGTGIRGMSGIRPR------------NGFIVRPLLCVSREDIL 168

Query: 182 KLAQDIGGQDLVN 194
               D G   +V+
Sbjct: 169 AWLADQGYAYMVD 181


>gi|116872487|ref|YP_849268.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Listeria welshimeri serovar 6b str. SLCC5334]
 gi|123463685|sp|A0AHK7|GUAA_LISW6 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|116741365|emb|CAK20489.1| GMP synthetase [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 518

 Score = 42.6 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 52/186 (27%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V   +       
Sbjct: 224 KKVLLALSGGVDSSVVGVLIHKAIGDQLTCIFVDHGLLRKGE---ADQVMATLQGEFNMN 280

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G         +   K +       +V       L     LA    
Sbjct: 281 IIKVDAKKRFMDKLAG-------VSDPEQKRKIIGNEFIYVFDDEANKLDGVEFLAQGTL 333

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            T+I+                 TI++      L  +    +  PL  L K E   L  ++
Sbjct: 334 YTDIIESGTA---------TAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGTEL 384

Query: 188 GGQDLV 193
           G  D +
Sbjct: 385 GMPDAI 390


>gi|16800150|ref|NP_470418.1| GMP synthase [Listeria innocua Clip11262]
 gi|24211759|sp|Q92CU0|GUAA_LISIN RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|16413540|emb|CAC96312.1| guaA [Listeria innocua Clip11262]
          Length = 518

 Score = 42.6 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 52/186 (27%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V   +       
Sbjct: 224 KKVLLALSGGVDSSVVGVLIHKAIGDQLTCIFVDHGLLRKGE---ADQVMATLQGEFNMN 280

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G         +   K +       +V       L     LA    
Sbjct: 281 IIKVDAKKRFMDKLAG-------VSDPEQKRKIIGNEFIYVFDDEANKLDGVEFLAQGTL 333

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            T+I+                 TI++      L  +    +  PL  L K E   L  ++
Sbjct: 334 YTDIIESGTA---------TAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGTEL 384

Query: 188 GGQDLV 193
           G  D +
Sbjct: 385 GMPDAI 390


>gi|75761780|ref|ZP_00741716.1| tRNA(Ile)-lysidine synthetase TilS [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228898817|ref|ZP_04063100.1| tRNA(Ile)-lysidine synthase [Bacillus thuringiensis IBL 4222]
 gi|228905860|ref|ZP_04069758.1| tRNA(Ile)-lysidine synthase [Bacillus thuringiensis IBL 200]
 gi|228963164|ref|ZP_04124334.1| tRNA(Ile)-lysidine synthase [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|74490730|gb|EAO54010.1| tRNA(Ile)-lysidine synthetase TilS [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228796549|gb|EEM43987.1| tRNA(Ile)-lysidine synthase [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228853800|gb|EEM98559.1| tRNA(Ile)-lysidine synthase [Bacillus thuringiensis IBL 200]
 gi|228860842|gb|EEN05219.1| tRNA(Ile)-lysidine synthase [Bacillus thuringiensis IBL 4222]
          Length = 480

 Score = 42.6 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 22/197 (11%), Positives = 52/197 (26%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D++K   + ++  SGG DS   L + L++                          + +V 
Sbjct: 21  DVLKNDSTIVVGVSGGPDSLALLYYLLEK--------------------RAEKQLEIVVA 60

Query: 63  LMPKW--KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +      D   ED      +  ++     T  + +                     F  
Sbjct: 61  HVDHMFRGDESHEDLQFVQDLCEELGIICETIRINVSQYQQQYGMNAQVAARECRYAFLE 120

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKK 177
            +  +     + +G    D       R       +    + ++       +  PL+ + K
Sbjct: 121 RIMKKYDARYVALGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGYLIRPLLGVTK 180

Query: 178 YETWKLAQDIGGQDLVN 194
            E       +     ++
Sbjct: 181 EEIVDYCNKLNLIPRID 197


>gi|46907321|ref|YP_013710.1| GMP synthase [Listeria monocytogenes serotype 4b str. F2365]
 gi|47091892|ref|ZP_00229686.1| GMP synthase [Listeria monocytogenes str. 4b H7858]
 gi|254823634|ref|ZP_05228635.1| GMP synthase [Listeria monocytogenes FSL J1-194]
 gi|254853020|ref|ZP_05242368.1| GMP synthase [Listeria monocytogenes FSL R2-503]
 gi|300764251|ref|ZP_07074245.1| GMP synthase [Listeria monocytogenes FSL N1-017]
 gi|50400343|sp|Q720X7|GUAA_LISMF RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|46880588|gb|AAT03887.1| GMP synthase [Listeria monocytogenes serotype 4b str. F2365]
 gi|47019608|gb|EAL10347.1| GMP synthase [Listeria monocytogenes str. 4b H7858]
 gi|258606368|gb|EEW18976.1| GMP synthase [Listeria monocytogenes FSL R2-503]
 gi|293592857|gb|EFG00618.1| GMP synthase [Listeria monocytogenes FSL J1-194]
 gi|300514903|gb|EFK41956.1| GMP synthase [Listeria monocytogenes FSL N1-017]
 gi|328466753|gb|EGF37874.1| GMP synthase [Listeria monocytogenes 1816]
          Length = 514

 Score = 42.6 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 52/186 (27%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V   +       
Sbjct: 220 KKVLLALSGGVDSSVVGVLIHKAIGDQLTCIFVDHGLLRKGE---ADQVMATLQGEFNMN 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G         +   K +       +V       L     LA    
Sbjct: 277 IIKVDAKKRFMDKLAG-------VSDPEQKRKIIGNEFIYVFDDEANKLDGVEFLAQGTL 329

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            T+I+                 TI++      L  +    +  PL  L K E   L  ++
Sbjct: 330 YTDIIESGTA---------TAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGTEL 380

Query: 188 GGQDLV 193
           G  D +
Sbjct: 381 GMPDAI 386


>gi|330830699|ref|YP_004393651.1| tRNA(Ile)-lysidine synthetase [Aeromonas veronii B565]
 gi|328805835|gb|AEB51034.1| tRNA(Ile)-lysidine synthetase [Aeromonas veronii B565]
          Length = 452

 Score = 42.6 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 22/56 (39%), Gaps = 6/56 (10%)

Query: 12 LLLFSGGQDSSTCLSW----ALDRFDRVETLSFDYGQRNKVELECRLC--VRKKIV 61
          L+ FSGG DS+  L      A +    +  L   +G     +     C  V +++ 
Sbjct: 23 LVAFSGGLDSTLLLVLAAQYAREHGLPLSALHVHHGLSPHADEWVAHCEAVCQQLA 78


>gi|315660070|ref|ZP_07912928.1| GMP synthase [Staphylococcus lugdunensis M23590]
 gi|315494971|gb|EFU83308.1| GMP synthase [Staphylococcus lugdunensis M23590]
          Length = 513

 Score = 42.6 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 56/185 (30%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS           D++  +  D+G   K E +    V ++  E      
Sbjct: 220 KVLCAMSGGVDSSVVAVLLHKAIGDQLTCIFVDHGLLRKGEGDM---VMEQFGE------ 270

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G D  +      +   + L      + +   + N FV   +              G 
Sbjct: 271 ---GFDMNIIRVNAQERFMNKLKGVSDPEQKRKIIGNEFVYVFDDEAAKLTDVDFLAQGT 327

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
               +    T  +        TI++      L  +    +  P+  L K E   L  ++G
Sbjct: 328 LYTDVIESGTKTA-------QTIKSHHNVGGLPEDMEFELIEPINTLFKDEVRALGIELG 380

Query: 189 GQDLV 193
             + +
Sbjct: 381 IPEHL 385


>gi|312201484|gb|ADQ44784.1| GMP synthase [glutamine-hydrolyzing] (Glutamineamidotransferase)
           (GMP synthetase) [Borrelia burgdorferi 297]
          Length = 528

 Score = 42.6 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 52/187 (27%), Gaps = 19/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DS  C           +  +  + G   K E        KKI+EL  +
Sbjct: 232 NKKVILGLSGGTDSLVCALLIKKAINKNLICVFINTGLLRKNED-------KKILELKHQ 284

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  ++   +     +    + S   +   +  ++       +   +      A    Y  
Sbjct: 285 YDLNIKYINASTKFLNRLKNISDPEEKRKIIGKEFVDVFEKITLEDQNIEYLAQGTIYSD 344

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I +       +    + +      +     +    E             K E  ++  +
Sbjct: 345 VIESKSKDSSSSKIKSHHNVGGLPDKMSLKLLEPLNEFF-----------KDEIIQIGIN 393

Query: 187 IGGQDLV 193
           +G +   
Sbjct: 394 LGIKKES 400


>gi|307294927|ref|ZP_07574769.1| GMP synthase, large subunit [Sphingobium chlorophenolicum L-1]
 gi|306879401|gb|EFN10619.1| GMP synthase, large subunit [Sphingobium chlorophenolicum L-1]
          Length = 519

 Score = 42.6 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 57/184 (30%), Gaps = 17/184 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+       +   D++  +  D+G     E        +++V L  +  
Sbjct: 223 RVICGLSGGVDSAVAAVLIHEAIGDQLTCVFVDHGLMRLGE-------AEQVVSLFREHY 275

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                        LG +   +   +   K +        +       +  A  LA     
Sbjct: 276 GIKLVHVNAEERFLGGL---AGLTDPEKKRKFIGGEFIALFEEEAKKIGGADFLAQGT-- 330

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
               +     +   +      TI++      L    ++ +  PL  L K E   L +++G
Sbjct: 331 ----LYPDVIESVSFTGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRVLGRELG 386

Query: 189 GQDL 192
             ++
Sbjct: 387 LPEI 390


>gi|307728891|ref|YP_003906115.1| Sulfate adenylyltransferase [Burkholderia sp. CCGE1003]
 gi|307583426|gb|ADN56824.1| Sulfate adenylyltransferase [Burkholderia sp. CCGE1003]
          Length = 320

 Score = 42.6 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 53/195 (27%), Gaps = 19/195 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF------DRVET---LSFDYGQRNKVELE 51
           + +++ +     LLFSGG+DS   L+ AL  F        V     +  D G      ++
Sbjct: 34  LRELVAECSKPALLFSGGKDSVVVLALALKAFGIGANRKTVLPFPLVHIDTGHNYDEVID 93

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
            R    K+I          L   H+      G +     T +         L      G 
Sbjct: 94  FRDRRAKEIGA-------QLVVGHVEDSIKRGTVRLRRETDSRNAAQAVTLLETIEQHGY 146

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
             +                I     E         R +        ++ G    V    P
Sbjct: 147 TALIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHNGEHLRV---FP 203

Query: 172 LMWLKKYETWKLAQD 186
           +    + + W+    
Sbjct: 204 ISNWTELDVWQYIAR 218


>gi|289551759|ref|YP_003472663.1| glutamine-hydrolyzing GMP synthase [Staphylococcus lugdunensis
           HKU09-01]
 gi|289181290|gb|ADC88535.1| glutamine-hydrolyzing GMP synthase [Staphylococcus lugdunensis
           HKU09-01]
          Length = 513

 Score = 42.6 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 56/185 (30%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS           D++  +  D+G   K E +    V ++  E      
Sbjct: 220 KVLCAMSGGVDSSVVAVLLHKAIGDQLTCIFVDHGLLRKGEGDM---VMEQFGE------ 270

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G D  +      +   + L      + +   + N FV   +              G 
Sbjct: 271 ---GFDMNIIRVNAQERFMNKLKGVSDPEQKRKIIGNEFVYVFDDEAAKLTDVDFLAQGT 327

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
               +    T  +        TI++      L  +    +  P+  L K E   L  ++G
Sbjct: 328 LYTDVIESGTKTA-------QTIKSHHNVGGLPEDMEFELIEPINTLFKDEVRALGIELG 380

Query: 189 GQDLV 193
             + +
Sbjct: 381 IPEHL 385


>gi|290999445|ref|XP_002682290.1| predicted protein [Naegleria gruberi]
 gi|284095917|gb|EFC49546.1| predicted protein [Naegleria gruberi]
          Length = 408

 Score = 42.6 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 20/146 (13%), Positives = 38/146 (26%), Gaps = 4/146 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS       +    V +L       ++ +     C   K    +    +
Sbjct: 33  RIVVGMSGGVDSSLTACLLKEFGFDVVSLHMRNWDSSEEDPSREHCTFTKDWNDVKVICE 92

Query: 70  SLGEDHI----LPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           + G  H+     P+  +    +    K +                + I F         +
Sbjct: 93  TFGIKHVGSSFHPVEFIDQYWNDVFEKLLDGYSIGQTPNPDLFCNKFIKFDAMLNYAIEK 152

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTI 151
            G   I  G              +T 
Sbjct: 153 GGADYIATGHYAQLGYSDNGETSNTH 178


>gi|270648390|ref|ZP_06222198.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
 gi|270317215|gb|EFA28806.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
          Length = 76

 Score = 42.6 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 25/71 (35%), Gaps = 8/71 (11%)

Query: 1  MNDIIKKAPSA-----LLLFSGGQDSSTCL---SWALDRFDRVETLSFDYGQRNKVELEC 52
          ++DI K+   A     L+  SGG DS+  L   +    +   +  LS      +      
Sbjct: 4  LSDIEKQLKKATTQAFLIALSGGLDSTVLLSLFAKLRQKQPHLPPLSVRAIHIHHGLSPN 63

Query: 53 RLCVRKKIVEL 63
               K   +L
Sbjct: 64 ADSWAKHCQDL 74


>gi|264681434|ref|NP_001161112.1| asparagine synthetase [Sus scrofa]
 gi|262036930|dbj|BAI47600.1| asparagine synthetase [Sus scrofa]
          Length = 561

 Score = 42.6 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 34/127 (26%), Gaps = 4/127 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRV---ETL-SFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            L SGG DSS   +  L +         L +F  G  +  +L     V   I     +  
Sbjct: 255 CLLSGGLDSSLVAATLLKQLKEAQVQYPLQTFAIGMEDSPDLLAARKVADHIGSEHHEVL 314

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  E   +   ++  +    +T   A                +++      +     G 
Sbjct: 315 FNSEEGIQVLDEVIFSLETYDITTVRASVGMYLISKYIRKNTDSVVIFSGEGSDELTQGY 374

Query: 129 TNIVIGV 135
                  
Sbjct: 375 IYFHKAP 381


>gi|238926975|ref|ZP_04658735.1| argininosuccinate synthase [Selenomonas flueggei ATCC 43531]
 gi|238885209|gb|EEQ48847.1| argininosuccinate synthase [Selenomonas flueggei ATCC 43531]
          Length = 403

 Score = 42.6 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 26/201 (12%), Positives = 52/201 (25%), Gaps = 16/201 (7%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           + K+    +L +SGG D+S  + W  +      V     D GQ +++             
Sbjct: 1   MAKQIKKVVLAYSGGLDTSVIIPWLKEHYDGCEVIAACADVGQGDELS------------ 48

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
            ++     + G   +  + +  +     +   +                   +       
Sbjct: 49  -VVHDKALASGASKVFIVDLTKEFLEEYVWPTLKAGAVYEGKYLLGTSFARPVIAKALVD 107

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-HVTVHTPLMWLKKYET 180
           +A R G   I  G                  A    I        +   T  +   K   
Sbjct: 108 IAKREGADAIAHGATGKGNDQVRFELTVKALAPNLQIIAPWREWDLDSRTAEIAYAKKHG 167

Query: 181 WKLAQDIGGQDLVNLILEESH 201
             +A +     +   I   SH
Sbjct: 168 IPVATENKTYSMDRNIWHLSH 188


>gi|157371830|ref|YP_001479819.1| GMP synthase [Serratia proteamaculans 568]
 gi|226739724|sp|A8GHV1|GUAA_SERP5 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|157323594|gb|ABV42691.1| GMP synthase, large subunit [Serratia proteamaculans 568]
          Length = 525

 Score = 42.6 bits (98), Expect = 0.047,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 53/183 (28%), Gaps = 22/183 (12%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS            R+  +  D G    + L     V +   +       
Sbjct: 230 VILGLSGGVDSSVTAMLLHRAIGKRLTCVFVDNG---LLRLNEAEQVLEMFGDHFGLNIV 286

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA--YRLG 127
            +  +     A+ G     +  K +               GR  + L             
Sbjct: 287 HVAAEDRFLSALAGVDEPEAKRKII---------------GRVFVELFDEEACKQSEVKW 331

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +    I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 332 LAQGTIYPDVIESAASATGKAHVIKSHHNVGGLPKEMKLGLVEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|320352650|ref|YP_004193989.1| argininosuccinate synthase [Desulfobulbus propionicus DSM 2032]
 gi|320121152|gb|ADW16698.1| argininosuccinate synthase [Desulfobulbus propionicus DSM 2032]
          Length = 399

 Score = 42.6 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 1/51 (1%)

Query: 8  APSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
              +L +SGG D+S  L   A +    V   S D GQ+   +      + 
Sbjct: 3  TNKIVLAYSGGLDTSVILKWLANEYGCPVIAYSADIGQKEDWDAVRAKGLA 53


>gi|304436517|ref|ZP_07396491.1| argininosuccinate synthase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304370563|gb|EFM24214.1| argininosuccinate synthase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 403

 Score = 42.6 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 26/201 (12%), Positives = 52/201 (25%), Gaps = 16/201 (7%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           + K+    +L +SGG D+S  + W  +      V     D GQ +++             
Sbjct: 1   MAKQIKKVVLAYSGGLDTSVIIPWLKEHYDGCEVIAACADVGQGDELS------------ 48

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
            ++     + G   +  + +  +     +   +                   +       
Sbjct: 49  -VVHDKALASGASKVFIVDLTKEFLEEYVWPTLKAGAVYEGKYLLGTSFARPVIAKALVD 107

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMES-HVTVHTPLMWLKKYET 180
           +A R G   I  G                  A    I        +   T  +   K   
Sbjct: 108 IAKREGADAIAHGATGKGNDQVRFELTVKALAPNLQIIAPWREWDLDSRTAEIAYAKKHG 167

Query: 181 WKLAQDIGGQDLVNLILEESH 201
             +A +     +   I   SH
Sbjct: 168 IPVATENKTYSMDRNIWHLSH 188


>gi|296814164|ref|XP_002847419.1| GMP synthase [Arthroderma otae CBS 113480]
 gi|238840444|gb|EEQ30106.1| GMP synthase [Arthroderma otae CBS 113480]
          Length = 541

 Score = 42.6 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 55/195 (28%), Gaps = 12/195 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
             ++ +    +   SGG DS+       +   DR   +  D G     E      VR+ +
Sbjct: 228 RAMVGEHGQVIGAVSGGVDSTVAAKLMKEAIGDRFHAVLVDNGVLRLNE---AEIVRETL 284

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                  K       ++  +         +      +    N             +  +A
Sbjct: 285 ------TKSLGINLTVIDASDKFLGRLKGVVDPEQKRKIIGNTFIEIFQDTAKTLVEQSA 338

Query: 121 TLAYRLGITNIVIGVCETDY--SGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
                  I  ++ G    D   S        TI+       L    H+ +  PL  L K 
Sbjct: 339 GYKEGTKIEWLLQGTLYPDVIESISFKGPSATIKTHHNVGGLLKGMHLKLIEPLRELFKD 398

Query: 179 ETWKLAQDIGGQDLV 193
           E   L  ++G  + +
Sbjct: 399 EVRSLGTNLGIPEDL 413


>gi|296139255|ref|YP_003646498.1| asparagine synthase (glutamine-hydrolyzing) [Tsukamurella
           paurometabola DSM 20162]
 gi|296027389|gb|ADG78159.1| asparagine synthase (glutamine-hydrolyzing) [Tsukamurella
           paurometabola DSM 20162]
          Length = 654

 Score = 42.6 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 27/68 (39%), Gaps = 4/68 (5%)

Query: 1   MNDIIKKAPSA-LLL---FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
           + D +K    A + +    SGG DS+   + A+     + T++  + +    E++     
Sbjct: 261 LRDSVKMHMRADVTVGSFLSGGIDSTAVAALAIQHNPDLITITTGFERDGYSEIDVAAES 320

Query: 57  RKKIVELM 64
            + I    
Sbjct: 321 AEAIGARH 328


>gi|303286249|ref|XP_003062414.1| asparagine synthase [Micromonas pusilla CCMP1545]
 gi|226455931|gb|EEH53233.1| asparagine synthase [Micromonas pusilla CCMP1545]
          Length = 672

 Score = 42.6 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 46/181 (25%), Gaps = 12/181 (6%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRV-------ETLS-FDYGQRNKVELECRLCVRKKIVELM 64
           +L SGG DSS   S A+             E +  F  G +   +L     V +++  + 
Sbjct: 248 VLLSGGLDSSLITSIAVRHKKEATNTFGSDEPVHSFSIGIKGAPDLVAARAVAEQLGTVH 307

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            +      E+ +  L  +  + H    + V   +    L          + L        
Sbjct: 308 HEV-HFTPEEALDALPDI--VYHLETFEQVRASVPMYLLCRHIKSLGFKMVLSGEGAD-E 363

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G         +         R  T       +     +          L   +    A
Sbjct: 364 LFGGYLYFHKAPDAAEFHRECVRKTTRLHQWDVLRANKSTMAWGIEVRTPLLSQQVCDYA 423

Query: 185 Q 185
            
Sbjct: 424 M 424


>gi|84496772|ref|ZP_00995626.1| argininosuccinate synthase [Janibacter sp. HTCC2649]
 gi|84383540|gb|EAP99421.1| argininosuccinate synthase [Janibacter sp. HTCC2649]
          Length = 475

 Score = 42.6 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 27/57 (47%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  ++W  ++     T + D GQ ++ E++       +    + +  D
Sbjct: 16 IAFSGGLDTSVAVAWMREKGAVPCTYTADLGQYDEPEIDTVPTRAGEYGAEIARLVD 72


>gi|298383937|ref|ZP_06993498.1| GMP synthase [Bacteroides sp. 1_1_14]
 gi|298263541|gb|EFI06404.1| GMP synthase [Bacteroides sp. 1_1_14]
          Length = 507

 Score = 42.6 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 55/193 (28%), Gaps = 33/193 (17%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D+G   K E +                
Sbjct: 214 DKVVLGLSGGVDSSVAAVLLNRAIGKNLTCIFVDHGMLRKNEFKN--------------- 258

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      +     +  + +  + + K           P R    +       + + 
Sbjct: 259 ----------VMNDYECLGLNVIGVDASEKFFAELAG-VTEPERKRKIIGKGFIDVFDVE 307

Query: 128 ITNIVIGVCETDYSGYPDC------RHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
              I         + YPDC          I++      L  + H+ +  PL  L K E  
Sbjct: 308 AHKIKDVKWLAQGTIYPDCIESLSITGTVIKSHHNVGGLPEKMHLKLCEPLRLLFKDEVR 367

Query: 182 KLAQDIGGQDLVN 194
           ++ +++G  + + 
Sbjct: 368 RVGRELGMPEHLI 380


>gi|296162033|ref|ZP_06844832.1| Sulfate adenylyltransferase [Burkholderia sp. Ch1-1]
 gi|295887777|gb|EFG67596.1| Sulfate adenylyltransferase [Burkholderia sp. Ch1-1]
          Length = 320

 Score = 42.6 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 53/195 (27%), Gaps = 19/195 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF------DRVET---LSFDYGQRNKVELE 51
           + +++ +     LLFSGG+DS   L  AL  F        V     +  D G   +  ++
Sbjct: 34  LRELVAECGKPALLFSGGKDSVVVLHLALKAFGIGANRKTVLPFPLVHIDTGHNYEEVID 93

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
            R    K+I          L   H+      G +     T +         L      G 
Sbjct: 94  FRDRRAKEIGA-------ELVVGHVEDSIKRGTVRLRRETDSRNAAQAVTLLETIEEYGY 146

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
             +                I     E         R +        ++ G    V    P
Sbjct: 147 TALIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHNGEHLRV---FP 203

Query: 172 LMWLKKYETWKLAQD 186
           +    + + W+    
Sbjct: 204 ISNWTELDVWQYIAR 218


>gi|300087768|ref|YP_003758290.1| GMP synthase large subunit [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527501|gb|ADJ25969.1| GMP synthase, large subunit [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 566

 Score = 42.6 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 59/185 (31%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DSS   +       D++  +  + G   + E E  L V ++       
Sbjct: 268 SGKVIAALSGGVDSSIVATLIHRAIGDQLTCIFVNNGLLRREEAERTLKVFRQ------- 320

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +LG + +   A    +   +   +   K +        V       L     LA   
Sbjct: 321 ---NLGMNIVYVEATDRFLDKLAGITDPEQKRKAIGAEFISVFEDEAKKLGQVDFLAQGT 377

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
              +++  V     +          ++      L     + +  P+ +L K E  ++  +
Sbjct: 378 LYPDVIESVASVGTASAKI------KSHHNVGGLPENMALKLLEPVRYLFKDEVRQVGLE 431

Query: 187 IGGQD 191
           +G  +
Sbjct: 432 LGLPE 436


>gi|268679904|ref|YP_003304335.1| Queuosine synthesis-like protein [Sulfurospirillum deleyianum DSM
          6946]
 gi|268617935|gb|ACZ12300.1| Queuosine synthesis-like protein [Sulfurospirillum deleyianum DSM
          6946]
          Length = 261

 Score = 42.6 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 1/75 (1%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKK 59
          +  ++      ++ FSGG DSS  L  A D   + V  +S       + E+E    +  +
Sbjct: 8  LKRLLSSYERLIVAFSGGVDSSFLLKTAYDVLGENVLAISLQTPYIAESEIEEARRIADE 67

Query: 60 IVELMPKWKDSLGED 74
          I            E+
Sbjct: 68 IGARHLVLVKPWMEE 82


>gi|226227156|ref|YP_002761262.1| GMP synthase [Gemmatimonas aurantiaca T-27]
 gi|259647683|sp|C1A3W7|GUAA_GEMAT RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226090347|dbj|BAH38792.1| GMP synthase [Gemmatimonas aurantiaca T-27]
          Length = 513

 Score = 42.6 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 21/182 (11%), Positives = 40/182 (21%), Gaps = 16/182 (8%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DSS   +       D++  +  D G     E E      +           
Sbjct: 217 VICGLSGGVDSSVAAALVHKAIGDQLTCIFVDTGLLRLHEREQVERTMRA---------- 266

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                  + L  +                +                    A       + 
Sbjct: 267 ----HLGIKLITVRAEDRFLNGLAGEGDPEKKRKIIGHTFIDVFEDASAEAGKNAEFLVQ 322

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
             +        S          +       L  +    +  PL  L K E   + +++G 
Sbjct: 323 GTLYPDVIESVSAKGGPSATI-KTHHNVGGLKPDMKFKLIEPLRELFKDEVRNVGRELGL 381

Query: 190 QD 191
            +
Sbjct: 382 PE 383


>gi|193075070|gb|ACF08537.1| GuaA [Pseudomonas aeruginosa]
          Length = 281

 Score = 42.6 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 54/185 (29%), Gaps = 19/185 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMP 65
           +   LL  SGG DSS   +       D++  +  D G  R     +      + +   + 
Sbjct: 79  SSKVLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRLHEGDQVMAMFAENMGVKVI 138

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +            L  L  ++     + +  +             +++ FL         
Sbjct: 139 RANAEDK-----FLGRLAGVADPEEKRKIIGRTFIEVFDEEATKLQDVKFLAQGTIY--- 190

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                        + +G    +   I++      L  +    +  PL  L K E  K+  
Sbjct: 191 ---------PDVIESAGAKTGKAHVIKSHHNVGGLPEDMQFELVEPLRELFKDEVRKIGL 241

Query: 186 DIGGQ 190
           ++G  
Sbjct: 242 ELGVP 246


>gi|254854449|ref|ZP_05243797.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|300766352|ref|ZP_07076311.1| tRNA(Ile)-lysidine synthetase [Listeria monocytogenes FSL N1-017]
 gi|258607849|gb|EEW20457.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|300512951|gb|EFK40039.1| tRNA(Ile)-lysidine synthetase [Listeria monocytogenes FSL N1-017]
          Length = 648

 Score = 42.6 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 54/194 (27%), Gaps = 18/194 (9%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRV-ETLSFDYGQRNKVELECRLCVRKKIV 61
           D+I+     L+  SGG DS   L +  +      E +S  +   +  E        + +V
Sbjct: 16  DLIRSDDKLLVAVSGGPDSLALLHFLWNSNLVPKEAISVAHLNHHLRENAANE---QNVV 72

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           E   + +        + +    +     + +   +   D           N + L   A 
Sbjct: 73  EAFCESQGIPFYIEEVDVKSRAESLQKGIEETARIVRYDFFEKVMAEKKINKLALAHHAD 132

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
                 +  +V G     +SG    R                       P + + K E  
Sbjct: 133 DQIETILMRLVRGSASIGWSGIQPKRELKGGQA--------------IRPFLPITKAEII 178

Query: 182 KLAQDIGGQDLVNL 195
             AQ       ++ 
Sbjct: 179 DYAQKHELAYEIDE 192


>gi|187918640|ref|YP_001884206.1| tRNA(Ile)-lysidine synthetase TilS [Borrelia hermsii DAH]
 gi|119861488|gb|AAX17283.1| tRNA(Ile)-lysidine synthetase TilS [Borrelia hermsii DAH]
          Length = 439

 Score = 42.6 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 1/61 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
              +++ FSGG DS+T L    +   + +    F +  R + E    +   KK      
Sbjct: 21 PKGKSIVAFSGGADSTTLLLGLKEYLNNNIVAFYFAHYIRPEFEQNLEIEHIKKFCNFHN 80

Query: 66 K 66
           
Sbjct: 81 I 81


>gi|78042656|ref|YP_360115.1| hypothetical protein CHY_1281 [Carboxydothermus hydrogenoformans
          Z-2901]
 gi|77994771|gb|ABB13670.1| conserved hypothetical protein TIGR00268 [Carboxydothermus
          hydrogenoformans Z-2901]
          Length = 275

 Score = 42.6 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 1/68 (1%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKK 59
          + +I+++  S ++ FSGG DS+  L  A D   D V  ++        +ELE    + + 
Sbjct: 12 LQNILQEMGSVVIAFSGGVDSTFLLKVAKDVLGDNVLAVTATSSTYPAIELEEAKKLAQT 71

Query: 60 IVELMPKW 67
                  
Sbjct: 72 FGVRHLII 79


>gi|25028088|ref|NP_738142.1| argininosuccinate synthase [Corynebacterium efficiens YS-314]
 gi|259505640|ref|ZP_05748542.1| argininosuccinate synthase [Corynebacterium efficiens YS-314]
 gi|29336736|sp|Q8FTM9|ASSY_COREF RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|23493372|dbj|BAC18342.1| argininosuccinate synthetase [Corynebacterium efficiens YS-314]
 gi|259166771|gb|EEW51325.1| argininosuccinate synthase [Corynebacterium efficiens YS-314]
          Length = 401

 Score = 42.6 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 19/53 (35%), Gaps = 1/53 (1%)

Query: 7  KAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
               +L +SGG D+S  +   +      V  +S D GQ  +     R     
Sbjct: 1  MTNRVVLAYSGGLDTSVAIPYLSKMTGGEVVAVSLDLGQGGEDMESVRQRALD 53


>gi|29349673|ref|NP_813176.1| GMP synthase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253569956|ref|ZP_04847365.1| bifunctional GMP synthase/glutamine amidotransferase [Bacteroides
           sp. 1_1_6]
 gi|44887957|sp|Q89ZV6|GUAA1_BACTN RecName: Full=GMP synthase [glutamine-hydrolyzing] 1; AltName:
           Full=GMP synthetase 1; AltName: Full=Glutamine
           amidotransferase 1
 gi|29341583|gb|AAO79370.1| GMP synthase (glutamine-hydrolyzing) [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251840337|gb|EES68419.1| bifunctional GMP synthase/glutamine amidotransferase [Bacteroides
           sp. 1_1_6]
          Length = 507

 Score = 42.6 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 55/193 (28%), Gaps = 33/193 (17%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D+G   K E +                
Sbjct: 214 DKVVLGLSGGVDSSVAAVLLNRAIGKNLTCIFVDHGMLRKNEFKN--------------- 258

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      +     +  + +  + + K           P R    +       + + 
Sbjct: 259 ----------VMNDYECLGLNVIGVDASEKFFAELAG-VTEPERKRKIIGKGFIDVFDVE 307

Query: 128 ITNIVIGVCETDYSGYPDC------RHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
              I         + YPDC          I++      L  + H+ +  PL  L K E  
Sbjct: 308 AHKIKDVKWLAQGTIYPDCIESLSITGTVIKSHHNVGGLPEKMHLKLCEPLRLLFKDEVR 367

Query: 182 KLAQDIGGQDLVN 194
           ++ +++G  + + 
Sbjct: 368 RVGRELGMPEHLI 380


>gi|325959954|ref|YP_004291420.1| hypothetical protein Metbo_2234 [Methanobacterium sp. AL-21]
 gi|325331386|gb|ADZ10448.1| Conserved hypothetical protein CHP00268 [Methanobacterium sp.
          AL-21]
          Length = 349

 Score = 42.6 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 26/68 (38%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
          +  + L+ FSGG DSS     A +       ++ D G   +  +     +  ++      
Sbjct: 15 RDKNILIAFSGGADSSLVAKIASEVSKESLAVTVDNGVMPQDFIANATKIAGELGIKHRV 74

Query: 67 WKDSLGED 74
           +++   D
Sbjct: 75 VEENYLND 82


>gi|256839194|ref|ZP_05544704.1| tRNA methyl transferase [Parabacteroides sp. D13]
 gi|256740113|gb|EEU53437.1| tRNA methyl transferase [Parabacteroides sp. D13]
          Length = 358

 Score = 42.6 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 50/187 (26%), Gaps = 8/187 (4%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
            L SGG DSS  +    +            G   + +     C  ++ +E+        G
Sbjct: 5   ALVSGGVDSSVVVHQLKEAGYDPTIFYIRIGM--EDKDGYIDCPAEEDIEITSYIARKYG 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
               + +++  +     ++  +    +        +  + I F  F              
Sbjct: 63  CRFEI-VSLHDEYWDRVVSYTIESVKRGLTPNPDMMCNKYIKFGCFEEKWGKDFDKIATG 121

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM---WLKKYET--WKLAQDI 187
                T+  G            +    LG  + + +   +     L K E      AQ +
Sbjct: 122 HYATTTEIDGKIWLSTAKDPVKDQTDFLGQITRLQIQKLMFPIGHLMKSEVRAIAEAQKL 181

Query: 188 GGQDLVN 194
                 +
Sbjct: 182 PSAKRKD 188


>gi|255012392|ref|ZP_05284518.1| tRNA-specific 2-thiouridylase MnmA [Bacteroides sp. 2_1_7]
 gi|262382361|ref|ZP_06075498.1| tRNA methyl transferase [Bacteroides sp. 2_1_33B]
 gi|298374740|ref|ZP_06984698.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides sp. 3_1_19]
 gi|301308423|ref|ZP_07214377.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides sp. 20_3]
 gi|262295239|gb|EEY83170.1| tRNA methyl transferase [Bacteroides sp. 2_1_33B]
 gi|298269108|gb|EFI10763.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides sp. 3_1_19]
 gi|300833893|gb|EFK64509.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Bacteroides sp. 20_3]
          Length = 358

 Score = 42.6 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 50/187 (26%), Gaps = 8/187 (4%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
            L SGG DSS  +    +            G   + +     C  ++ +E+        G
Sbjct: 5   ALVSGGVDSSVVVHQLKEAGYDPTIFYIRIGM--EDKDGYIDCPAEEDIEITSYIARKYG 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
               + +++  +     ++  +    +        +  + I F  F              
Sbjct: 63  CRFEI-VSLHDEYWDRVVSYTIESVKRGLTPNPDMMCNKYIKFGCFEEKWGKDFDKIATG 121

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM---WLKKYET--WKLAQDI 187
                T+  G            +    LG  + + +   +     L K E      AQ +
Sbjct: 122 HYATTTEIDGKIWLSTAKDPVKDQTDFLGQITRLQIQKLMFPIGHLMKSEVRAIAEAQKL 181

Query: 188 GGQDLVN 194
                 +
Sbjct: 182 PSAKRKD 188


>gi|302036775|ref|YP_003797097.1| GMP synthase (glutamine-hydrolyzing) [Candidatus Nitrospira
           defluvii]
 gi|190343190|gb|ACE75578.1| GMP synthetase [Candidatus Nitrospira defluvii]
 gi|300604839|emb|CBK41171.1| GMP synthase (glutamine-hydrolyzing) [Candidatus Nitrospira
           defluvii]
          Length = 518

 Score = 42.6 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 49/188 (26%), Gaps = 18/188 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS   +       D++  +  D G     E   R  V K     M  
Sbjct: 221 TERVICALSGGVDSSVAAALTHRAVGDQLTCVFVDNGVLRTGE---RDQVEKTFASQMHL 277

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                          +  +  +S        + D       +    I      +     +
Sbjct: 278 --------------NMRILDRTSQFLTGLKNVTDPERKRKIIGRLFIKNFEVESKKLKGI 323

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                     +   S        TI+       L     + +  PL  L K E   L Q+
Sbjct: 324 KYLVQGTLYPDVIESVSFKGPSATIKTHHNVGGLPTRMKLKLVEPLRELFKDEVRVLGQE 383

Query: 187 IGGQDLVN 194
           +G  D + 
Sbjct: 384 LGLPDEII 391


>gi|15894260|ref|NP_347609.1| argininosuccinate synthase [Clostridium acetobutylicum ATCC 824]
 gi|24211521|sp|Q97KE6|ASSY_CLOAB RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|15023879|gb|AAK78949.1|AE007613_5 Argininosuccinate synthase [Clostridium acetobutylicum ATCC 824]
 gi|325508387|gb|ADZ20023.1| argininosuccinate synthase [Clostridium acetobutylicum EA 2018]
          Length = 400

 Score = 42.6 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 21/171 (12%), Positives = 44/171 (25%), Gaps = 15/171 (8%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L +SGG D+S  + W  D +D  V  +  + GQ    E +      K +     
Sbjct: 1   MKEKVVLAYSGGLDTSVTIPWLKDNYDVEVIAVCVNVGQ----EDDMDKVKEKAVNSGAA 56

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           K      ++  +   +   I  ++                        +       +A++
Sbjct: 57  KIYVEDVKEEFVTEYLYNAIKWNATY---------EGKYLLGTSFARPLIAKKLVEVAHK 107

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
            G   I  G                       I +       + +    + 
Sbjct: 108 EGAKYICHGCTGKGNDQVRFETAIAAMDPYIKI-IAPWRLWNIDSREAEID 157


>gi|154244402|ref|YP_001415360.1| GMP synthase [Xanthobacter autotrophicus Py2]
 gi|154158487|gb|ABS65703.1| GMP synthase, large subunit [Xanthobacter autotrophicus Py2]
          Length = 524

 Score = 42.6 bits (98), Expect = 0.048,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 54/183 (29%), Gaps = 17/183 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS       +   D++  +  D+G   + E         ++V L     
Sbjct: 228 RVICGLSGGVDSSVAAVLIHEAIGDQLTCVFVDHGLMRQAE-------ADEVVSLFR--- 277

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                 + +PL  +                +        +              A  L  
Sbjct: 278 ----GHYNIPLVHVDASELFLKELEGVEDPEAKRKTIGRLFIDVFDAEARKVGGADFLAQ 333

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+    +      TI++      L    ++ +  PL  L K E   L +++G
Sbjct: 334 GTLYPDVIESV--SFAGGPSVTIKSHHNVGGLPERMNMKLVEPLRDLFKDEVRALGRELG 391

Query: 189 GQD 191
             +
Sbjct: 392 LPE 394


>gi|330814243|ref|YP_004358482.1| NAD synthetase [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487338|gb|AEA81743.1| NAD synthetase [Candidatus Pelagibacter sp. IMCC9063]
          Length = 245

 Score = 42.6 bits (98), Expect = 0.049,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 53/188 (28%), Gaps = 30/188 (15%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           + + KK  S ++  SGG DS+   +       +   LS    Q             K+  
Sbjct: 19  SKMPKKPDSLVVGVSGGIDSAVVSTICAASGFKTFVLSMPIKQ------------IKEQD 66

Query: 62  ELMPKWKDSLGE-DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           +L     D L +    + +  +      S        +  NN  + F   R  + +    
Sbjct: 67  DLSKIHCDWLFDNFKNVDVLNIN---LDSTFGEFEKTLGKNNNEHAFANTRARLRMSTLY 123

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            +A       +                 + +                  +P+    K + 
Sbjct: 124 QVAGSNNGIVV--------------GTGNKVEDFGVGFYTKYGDGGVDISPIADCTKTQV 169

Query: 181 WKLAQDIG 188
           W + +++G
Sbjct: 170 WDMGKELG 177


>gi|327484760|gb|AEA79167.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae LMA3894-4]
          Length = 440

 Score = 42.6 bits (98), Expect = 0.049,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 17/52 (32%), Gaps = 4/52 (7%)

Query: 10 SALLLFSGGQDSSTCLSWALDR----FDRVETLSFDYGQRNKVELECRLCVR 57
            LL  SGG DS   L+            V  +   +G     +   + C R
Sbjct: 19 KILLALSGGVDSRVLLALLARGRDEFGWDVAAVHVHHGLSPNADQWAQHCQR 70


>gi|314996626|ref|ZP_07861655.1| GMP synthase protein [Enterococcus faecium TX0133a01]
 gi|313589222|gb|EFR68067.1| GMP synthase protein [Enterococcus faecium TX0133a01]
          Length = 520

 Score = 42.6 bits (98), Expect = 0.049,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 55/186 (29%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+    K E      V + +       
Sbjct: 223 KKVLLGLSGGVDSSVVGVLLQKAIGDQLTCIFVDHVLLRKGE---AEQVMESLGGKFG-- 277

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      L I+   +       +A                  +F   A  LA   G
Sbjct: 278 -----------LNIIKVDAKERFLSKLAGVSDPEEKRKIIGNEFVYVFDDEATKLAGEEG 326

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           ++ +  G   TD          TI++      L  +    +  PL  L K E  +L   +
Sbjct: 327 VSFLAQGTLYTDVIESGTETAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRELGTQL 386

Query: 188 GGQDLV 193
           G  D +
Sbjct: 387 GMPDSI 392


>gi|309386087|gb|ADO66968.1| GMP synthase [Enterococcus faecium]
          Length = 521

 Score = 42.6 bits (98), Expect = 0.049,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 55/186 (29%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+    K E      V + +       
Sbjct: 224 KKVLLGLSGGVDSSVVGVLLQKAIGDQLTCIFVDHVLLRKGE---AEQVMESLGGKFG-- 278

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      L I+   +       +A                  +F   A  LA   G
Sbjct: 279 -----------LNIIKVDAKERFLSKLAGVSDPEEKRKIIGNEFVYVFDDEATKLAGEEG 327

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           ++ +  G   TD          TI++      L  +    +  PL  L K E  +L   +
Sbjct: 328 VSFLAQGTLYTDVIESGTETAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRELGTQL 387

Query: 188 GGQDLV 193
           G  D +
Sbjct: 388 GMPDSI 393


>gi|294621454|ref|ZP_06700624.1| GMP synthase [Enterococcus faecium U0317]
 gi|291598979|gb|EFF30026.1| GMP synthase [Enterococcus faecium U0317]
          Length = 510

 Score = 42.6 bits (98), Expect = 0.049,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 55/186 (29%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+    K E      V + +       
Sbjct: 213 KKVLLGLSGGVDSSVVGVLLQKAIGDQLTCIFVDHVLLRKGE---AEQVMESLGGKFG-- 267

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      L I+   +       +A                  +F   A  LA   G
Sbjct: 268 -----------LNIIKVDAKERFLSKLAGVSDPEEKRKIIGNEFVYVFDDEATKLAGEEG 316

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           ++ +  G   TD          TI++      L  +    +  PL  L K E  +L   +
Sbjct: 317 VSFLAQGTLYTDVIESGTETAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRELGTQL 376

Query: 188 GGQDLV 193
           G  D +
Sbjct: 377 GMPDSI 382


>gi|258616836|ref|ZP_05714606.1| GMP synthase [Enterococcus faecium DO]
          Length = 451

 Score = 42.6 bits (98), Expect = 0.049,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 55/186 (29%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+    K E      V + +       
Sbjct: 154 KKVLLGLSGGVDSSVVGVLLQKAIGDQLTCIFVDHVLLRKGE---AEQVMESLGGKFG-- 208

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      L I+   +       +A                  +F   A  LA   G
Sbjct: 209 -----------LNIIKVDAKERFLSKLAGVSDPEEKRKIIGNEFVYVFDDEATKLAGEEG 257

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           ++ +  G   TD          TI++      L  +    +  PL  L K E  +L   +
Sbjct: 258 VSFLAQGTLYTDVIESGTETAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRELGTQL 317

Query: 188 GGQDLV 193
           G  D +
Sbjct: 318 GMPDSI 323


>gi|257880522|ref|ZP_05660175.1| GMP synthase [Enterococcus faecium 1,230,933]
 gi|257883529|ref|ZP_05663182.1| GMP synthase [Enterococcus faecium 1,231,502]
 gi|257891928|ref|ZP_05671581.1| GMP synthase [Enterococcus faecium 1,231,410]
 gi|260558205|ref|ZP_05830402.1| GMP synthase [Enterococcus faecium C68]
 gi|261206582|ref|ZP_05921281.1| GMP synthase [Enterococcus faecium TC 6]
 gi|257814750|gb|EEV43508.1| GMP synthase [Enterococcus faecium 1,230,933]
 gi|257819187|gb|EEV46515.1| GMP synthase [Enterococcus faecium 1,231,502]
 gi|257828288|gb|EEV54914.1| GMP synthase [Enterococcus faecium 1,231,410]
 gi|260075787|gb|EEW64092.1| GMP synthase [Enterococcus faecium C68]
 gi|260079199|gb|EEW66891.1| GMP synthase [Enterococcus faecium TC 6]
          Length = 482

 Score = 42.6 bits (98), Expect = 0.049,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 55/186 (29%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+    K E      V + +       
Sbjct: 185 KKVLLGLSGGVDSSVVGVLLQKAIGDQLTCIFVDHVLLRKGE---AEQVMESLGGKFG-- 239

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      L I+   +       +A                  +F   A  LA   G
Sbjct: 240 -----------LNIIKVDAKERFLSKLAGVSDPEEKRKIIGNEFVYVFDDEATKLAGEEG 288

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           ++ +  G   TD          TI++      L  +    +  PL  L K E  +L   +
Sbjct: 289 VSFLAQGTLYTDVIESGTETAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRELGTQL 348

Query: 188 GGQDLV 193
           G  D +
Sbjct: 349 GMPDSI 354


>gi|260588671|ref|ZP_05854584.1| PP-loop family protein [Blautia hansenii DSM 20583]
 gi|331081980|ref|ZP_08331108.1| hypothetical protein HMPREF0992_00032 [Lachnospiraceae bacterium
          6_1_63FAA]
 gi|260541146|gb|EEX21715.1| PP-loop family protein [Blautia hansenii DSM 20583]
 gi|330405575|gb|EGG85105.1| hypothetical protein HMPREF0992_00032 [Lachnospiraceae bacterium
          6_1_63FAA]
          Length = 282

 Score = 42.6 bits (98), Expect = 0.049,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 25/74 (33%), Gaps = 6/74 (8%)

Query: 13 LLFSGGQDSSTCLSWAL------DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
          + FSGG DSS  L  A        +   +  ++F        +LE    V K+   +   
Sbjct: 25 IAFSGGVDSSLLLMLAKECMKQQKKAGNIHAVTFHTVLHPPCDLEIAQKVAKEAGAVHKV 84

Query: 67 WKDSLGEDHILPLA 80
             +  E   +   
Sbjct: 85 VFVNELEQEEIRFN 98


>gi|254431212|ref|ZP_05044915.1| argininosuccinate synthase [Cyanobium sp. PCC 7001]
 gi|197625665|gb|EDY38224.1| argininosuccinate synthase [Cyanobium sp. PCC 7001]
          Length = 403

 Score = 42.6 bits (98), Expect = 0.049,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 57/190 (30%), Gaps = 25/190 (13%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           ++ +A  A+L +SGG D+S C+ +  +    + V T + D GQ +++E   R        
Sbjct: 1   MMGRAKKAVLAYSGGVDTSVCIPYLKNEWGVEEVITFAADLGQGDELEPIRRK------- 53

Query: 62  ELMPKWKDSLGEDHILP-LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            L      SL  D I P +      +  +             L    +  R +       
Sbjct: 54  ALDAGASQSLVGDLIEPFITEFAFPAIRANALYEGRYPLSTALARPLIARRLVEIAREVG 113

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
             A   G T         D +                  L  +  V        + + ET
Sbjct: 114 ADAVAHGCTGKGNDQVRFDVAIGA---------------LAPDLKVLTPAREWGMSREET 158

Query: 181 WKLAQDIGGQ 190
               +  G  
Sbjct: 159 IAYGERCGIP 168


>gi|119508976|ref|ZP_01628128.1| asparagine synthase B [Nodularia spumigena CCY9414]
 gi|119466505|gb|EAW47390.1| asparagine synthase B [Nodularia spumigena CCY9414]
          Length = 496

 Score = 42.6 bits (98), Expect = 0.049,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 2/55 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  SGG DSS   +        +   SF  G  N  +L+    V + +  +  ++
Sbjct: 224 VFLSGGLDSSIIAALMRQHIPNLH--SFSVGLPNSPDLKAARLVAEHLGTIHHEY 276


>gi|51894010|ref|YP_076701.1| argininosuccinate synthase [Symbiobacterium thermophilum IAM
          14863]
 gi|68566241|sp|Q67KE1|ASSY_SYMTH RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|51857699|dbj|BAD41857.1| argininosuccinate synthase [Symbiobacterium thermophilum IAM
          14863]
          Length = 401

 Score = 42.6 bits (98), Expect = 0.049,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 1/50 (2%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCV 56
              +L +SGG D+S  + W  + +D  V  L+ D G  +K     R   
Sbjct: 3  KKKCVLAYSGGLDTSVAIHWIKENYDADVVALAVDVGANDKDLEFIRQKA 52


>gi|28199328|ref|NP_779642.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Xylella fastidiosa Temecula1]
 gi|182682053|ref|YP_001830213.1| GMP synthase [Xylella fastidiosa M23]
 gi|32129566|sp|Q87BK6|GUAA_XYLFT RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226739768|sp|B2I6W2|GUAA_XYLF2 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|28057434|gb|AAO29291.1| glutamine amidotransferase [Xylella fastidiosa Temecula1]
 gi|182632163|gb|ACB92939.1| GMP synthase, large subunit [Xylella fastidiosa M23]
 gi|307578321|gb|ADN62290.1| GMP synthase [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 522

 Score = 42.6 bits (98), Expect = 0.049,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 50/182 (27%), Gaps = 18/182 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +        ++  +  D G     E +              +   
Sbjct: 227 VILGLSGGVDSSVVAALLHKAIGSQLTCVFVDTGMLRWGEGD--------------QVMA 272

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E   + +  +   S            +        +  +           A  L   
Sbjct: 273 MFAEHMGVNVVRINAASRYFDALQGVYDPEAKRKIIGNLFIQIFEEEASKRKQAKWLAQG 332

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S     +   I++      L  +  + +  PL  L K E  +L   +G 
Sbjct: 333 TIYPDVIESAGS--KTGKAHVIKSHHNVGGLPEQMTLGMVEPLRELFKDEVRRLGVALGL 390

Query: 190 QD 191
             
Sbjct: 391 PH 392


>gi|305667734|ref|YP_003864021.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Maribacter sp. HTCC2170]
 gi|88707571|gb|EAQ99813.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Maribacter sp. HTCC2170]
          Length = 510

 Score = 42.6 bits (98), Expect = 0.049,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 18/54 (33%), Gaps = 1/54 (1%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
              +L  SGG DS+             +  +  + G   K E +  L   + + 
Sbjct: 214 DKVILGLSGGVDSTVAAILLHKAIGKHLHCIFVNNGLLRKNEFQDVLDQYEHMG 267


>gi|69247008|ref|ZP_00604209.1| GMP synthase, C-terminal:GMP synthase, N-terminal [Enterococcus
           faecium DO]
 gi|68194993|gb|EAN09459.1| GMP synthase, C-terminal:GMP synthase, N-terminal [Enterococcus
           faecium DO]
          Length = 537

 Score = 42.6 bits (98), Expect = 0.049,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 55/186 (29%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+    K E      V + +       
Sbjct: 240 KKVLLGLSGGVDSSVVGVLLQKAIGDQLTCIFVDHVLLRKGE---AEQVMESLGGKFG-- 294

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                      L I+   +       +A                  +F   A  LA   G
Sbjct: 295 -----------LNIIKVDAKERFLSKLAGVSDPEEKRKIIGNEFVYVFDDEATKLAGEEG 343

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           ++ +  G   TD          TI++      L  +    +  PL  L K E  +L   +
Sbjct: 344 VSFLAQGTLYTDVIESGTETAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRELGTQL 403

Query: 188 GGQDLV 193
           G  D +
Sbjct: 404 GMPDSI 409


>gi|295115979|emb|CBL36826.1| Predicted tRNA(5-methylaminomethyl-2-thiouridylate)
          methyltransferase, contains the PP-loop ATPase domain
          [butyrate-producing bacterium SM4/1]
          Length = 29

 Score = 42.6 bits (98), Expect = 0.049,   Method: Composition-based stats.
 Identities = 7/26 (26%), Positives = 11/26 (42%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRF 32
          +    ++  SGG DSS       +R 
Sbjct: 2  EKKKVVVGMSGGVDSSVAAWLLKNRG 27


>gi|297544225|ref|YP_003676527.1| PP-loop domain-containing protein [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296842000|gb|ADH60516.1| PP-loop domain protein [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 273

 Score = 42.6 bits (98), Expect = 0.049,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 45/151 (29%), Gaps = 27/151 (17%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCL---SWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           + + + K  +AL+ FSGG DS+         L   +R   ++       K EL+  + + 
Sbjct: 8   LQEYLSKLDNALIAFSGGVDSTFLAKVSYDVL--GNRALAVTVTSPIHAKSELKEAVELA 65

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           KKI               ++               ++    +    P             
Sbjct: 66  KKIG----------IPHLVVEFN------------DILEIEEFRKNPLNRCYICKFNLFS 103

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRH 148
               +A   G   I+ G    D S +   R 
Sbjct: 104 GFKAIAEEKGFKYILEGTNADDVSDFRPGRR 134


>gi|330444363|ref|YP_004377349.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Chlamydophila pecorum E58]
 gi|328807473|gb|AEB41646.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Chlamydophila pecorum E58]
          Length = 361

 Score = 42.6 bits (98), Expect = 0.050,   Method: Composition-based stats.
 Identities = 8/35 (22%), Positives = 11/35 (31%), Gaps = 1/35 (2%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSF 40
             + ++  SGG DSS             V  L  
Sbjct: 1  MNKTVVVAMSGGVDSSVVAYLLKRYTSYNVVGLFM 35


>gi|329114013|ref|ZP_08242780.1| GMP synthase [Acetobacter pomorum DM001]
 gi|326696760|gb|EGE48434.1| GMP synthase [Acetobacter pomorum DM001]
          Length = 533

 Score = 42.6 bits (98), Expect = 0.050,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 52/185 (28%), Gaps = 17/185 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS       +   D++  +  D+G     E      V K          
Sbjct: 237 KVICGLSGGVDSSVAAVLIHEAIGDQLTCIFVDHGMLRAGE---ADDVIKTFRGQFNI-- 291

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L      DI   +L      +I+   +   FV                  G 
Sbjct: 292 -------QLVHRDASDIFLKALEGVTDPEIKRKTIGRLFVEVFEEEATKLGGAQFLAQGT 344

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                     +   +      TI++      L    ++ +  PL  L K E   L +++ 
Sbjct: 345 LY----PDVIESVSFTGGPSVTIKSHHNVGGLPDRMNMKLVEPLRELFKDEVRDLGRELD 400

Query: 189 GQDLV 193
             +++
Sbjct: 401 IPEII 405


>gi|325958908|ref|YP_004290374.1| universal metal-binding-domain/4Fe-4S-binding-domain containing
          ABC transporter protein [Methanobacterium sp. AL-21]
 gi|325330340|gb|ADZ09402.1| universal metal-binding-domain/4Fe-4S-binding-domain containing
          ABC transporter protein [Methanobacterium sp. AL-21]
          Length = 226

 Score = 42.6 bits (98), Expect = 0.050,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 18/29 (62%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETL 38
           A +L+SGG+DS+  +  A++    VE L
Sbjct: 2  KAAVLYSGGKDSTMAVYKAIEEGYNVEYL 30


>gi|313158300|gb|EFR57702.1| putative argininosuccinate synthase [Alistipes sp. HGB5]
          Length = 400

 Score = 42.6 bits (98), Expect = 0.050,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 44/172 (25%), Gaps = 12/172 (6%)

Query: 7   KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +    +L FSGG D S      + ++   V T   + G  +K EL         +  +  
Sbjct: 2   EKKKVVLAFSGGLDTSFCVKYLSEEKGYDVYTAIANTGGFSKEELANIEKRAVALGAVRH 61

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                        L I  +    S+   V   I  N      V    I   +     A  
Sbjct: 62  AT-----------LDIEQEYYEKSIKYMVFGDILRNGTYPISVSSERIFQAIAIIEYAKS 110

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
           +G   +  G                + A E  I              +   K
Sbjct: 111 IGADCVAHGSTGAGNDQVRFDLTFQVLAPEIEIITPTRDMTLTREYEIDYLK 162


>gi|295102547|emb|CBL00092.1| argininosuccinate synthase [Faecalibacterium prausnitzii L2-6]
          Length = 411

 Score = 42.6 bits (98), Expect = 0.050,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 4/57 (7%)

Query: 5  IKKA--PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVR 57
          +KK      +L +SGG D+S  + W  + +    V  +S D GQ  +++        
Sbjct: 1  MKKEDIKKVVLAYSGGLDTSIIIPWLKENYNNCEVIAVSGDVGQGTELDGLEEKAKA 57


>gi|254498126|ref|ZP_05110881.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
 gi|254352641|gb|EET11421.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
          Length = 281

 Score = 42.6 bits (98), Expect = 0.050,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 54/186 (29%), Gaps = 23/186 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           ++I++    ++  SGG+DS T L+          ++ E  SF   Q      +  L    
Sbjct: 23  NMIQRGDRVMVCLSGGKDSFTLLTILEQLRRRSGNKFELFSFTLDQAQPGWDDSALRQW- 81

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
                    +D   +  IL          +  T ++  +          +  R    +++
Sbjct: 82  --------LEDRSIKHEIL----------TRDTYSIVKEKIPEGKTYCSLCSRLRRGIIY 123

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
                       +     +   +      ++          L       V  PL ++++ 
Sbjct: 124 RYAEENGYNKIALGHHRDDLVRTLMMSILYNGDIRSMPPKLLSDNKKHIVIRPLSYVQEK 183

Query: 179 ETWKLA 184
           +    A
Sbjct: 184 DIIAFA 189


>gi|182420268|ref|ZP_02951497.1| tRNA methyl transferase [Clostridium butyricum 5521]
 gi|237666593|ref|ZP_04526578.1| tRNA methyl transferase [Clostridium butyricum E4 str. BoNT E
          BL5262]
 gi|182375863|gb|EDT73455.1| tRNA methyl transferase [Clostridium butyricum 5521]
 gi|237657792|gb|EEP55347.1| tRNA methyl transferase [Clostridium butyricum E4 str. BoNT E
          BL5262]
          Length = 329

 Score = 42.6 bits (98), Expect = 0.050,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 27/90 (30%), Gaps = 3/90 (3%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           AL + SGG DS        ++   V  + F          E    + K+I   +     
Sbjct: 3  RALAMISGGLDSILAAKLIKEQGIDVIGICFR---SYFFNEENAKRMTKQIGIPLEVIDF 59

Query: 70 SLGEDHILPLAILGDISHSSLTKNVAMKIQ 99
          S     ++     G   + +   +    + 
Sbjct: 60 SKEHFDMVKSPEHGWGKNMNPCIDCHAMMM 89


>gi|91782173|ref|YP_557379.1| sulfate adenylyltransferase subunit 2 [Burkholderia xenovorans
           LB400]
 gi|91686127|gb|ABE29327.1| sulfate adenylyltransferase subunit 2 [Burkholderia xenovorans
           LB400]
          Length = 320

 Score = 42.6 bits (98), Expect = 0.050,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 53/195 (27%), Gaps = 19/195 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF------DRVET---LSFDYGQRNKVELE 51
           + +++ +     LLFSGG+DS   L  AL  F        V     +  D G   +  ++
Sbjct: 34  LRELVAECSKPALLFSGGKDSVVVLHLALKAFGIGANRKTVLPFPLVHIDTGHNYEEVID 93

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
            R    K+I          L   H+      G +     T +         L      G 
Sbjct: 94  FRDRRAKEIGA-------ELVVGHVEDSIKRGTVRLRRETDSRNAAQAVTLLETIEEYGY 146

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
             +                I     E         R +        ++ G    V    P
Sbjct: 147 TALIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHNGEHLRV---FP 203

Query: 172 LMWLKKYETWKLAQD 186
           +    + + W+    
Sbjct: 204 ISNWTELDVWQYIAR 218


>gi|304386260|ref|ZP_07368593.1| GMP synthase [Pediococcus acidilactici DSM 20284]
 gi|304327617|gb|EFL94844.1| GMP synthase [Pediococcus acidilactici DSM 20284]
          Length = 520

 Score = 42.6 bits (98), Expect = 0.050,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 55/204 (26%), Gaps = 30/204 (14%)

Query: 1   MNDIIKKA----------PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVE 49
           MND I                LL  SGG DSS           D++  +  D+G   K E
Sbjct: 208 MNDFIDMQVEKIREEVGDRKVLLGLSGGVDSSVVGVLLNKAIGDQLVCIFVDHGLLRKGE 267

Query: 50  LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
                 V   +          +         + G        K +  +  +         
Sbjct: 268 ---AKQVMDSLEGKFGLNIIKVDAQDRFLSKLAGVTDPEQKRKIIGNEFIEVFNDE---- 320

Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
                            GI  +  G   TD          TI++      L  + H  + 
Sbjct: 321 ------------AQKLKGIDFLAQGTLYTDVIESGTDTAQTIKSHHNVGGLPEDMHFELI 368

Query: 170 TPLMWLKKYETWKLAQDIGGQDLV 193
            PL  L K E   L + +G  + +
Sbjct: 369 EPLRTLFKDEARDLGEKLGMPEDL 392


>gi|298373197|ref|ZP_06983187.1| tRNA(Ile)-lysidine synthase [Bacteroidetes oral taxon 274 str.
          F0058]
 gi|298276101|gb|EFI17652.1| tRNA(Ile)-lysidine synthase [Bacteroidetes oral taxon 274 str.
          F0058]
          Length = 445

 Score = 42.6 bits (98), Expect = 0.050,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 23/62 (37%), Gaps = 3/62 (4%)

Query: 2  NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY---GQRNKVELECRLCVRK 58
          N+++      L+  SGG DS   L   +    R      ++   G  +  + +    + +
Sbjct: 14 NNLLSDNRKLLVAVSGGIDSVVLLDMLVRCGYRCAVAHCNFHLRGNESDNDEQFVRALAQ 73

Query: 59 KI 60
          K 
Sbjct: 74 KY 75


>gi|270290741|ref|ZP_06196965.1| GMP synthase [Pediococcus acidilactici 7_4]
 gi|270280801|gb|EFA26635.1| GMP synthase [Pediococcus acidilactici 7_4]
          Length = 517

 Score = 42.6 bits (98), Expect = 0.050,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 55/204 (26%), Gaps = 30/204 (14%)

Query: 1   MNDIIKKA----------PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVE 49
           MND I                LL  SGG DSS           D++  +  D+G   K E
Sbjct: 205 MNDFIDMQVEKIREEVGDRKVLLGLSGGVDSSVVGVLLNKAIGDQLVCIFVDHGLLRKGE 264

Query: 50  LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
                 V   +          +         + G        K +  +  +         
Sbjct: 265 ---AKQVMDSLEGKFGLNIIKVDAQDRFLSKLAGVTDPEQKRKIIGNEFIEVFNDE---- 317

Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
                            GI  +  G   TD          TI++      L  + H  + 
Sbjct: 318 ------------AQKLKGIDFLAQGTLYTDVIESGTDTAQTIKSHHNVGGLPEDMHFELI 365

Query: 170 TPLMWLKKYETWKLAQDIGGQDLV 193
            PL  L K E   L + +G  + +
Sbjct: 366 EPLRTLFKDEARDLGEKLGMPEDL 389


>gi|302346698|ref|YP_003814996.1| tRNA(Ile)-lysidine synthetase [Prevotella melaninogenica ATCC
          25845]
 gi|302150433|gb|ADK96694.1| tRNA(Ile)-lysidine synthetase [Prevotella melaninogenica ATCC
          25845]
          Length = 456

 Score = 42.6 bits (98), Expect = 0.050,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 24/59 (40%), Gaps = 3/59 (5%)

Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNK---VELECRLCVRKKIVELMPKW 67
          L+  SGG DS   L    +   RVE +  ++  R +    + +    + ++    + K 
Sbjct: 22 LVALSGGADSVALLLCIKELGYRVEAVHCNFHLRGEESLRDEQFCEDLCQRENIPLHKV 80


>gi|296109050|ref|YP_003615999.1| subunit of tRNA(5-methylaminomethyl-2-thiouridylate)
          methyltransferase [Methanocaldococcus infernus ME]
 gi|295433864|gb|ADG13035.1| subunit of tRNA(5-methylaminomethyl-2-thiouridylate)
          methyltransferase [Methanocaldococcus infernus ME]
          Length = 197

 Score = 42.6 bits (98), Expect = 0.050,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          LLFSGG+DSS            V+ ++ ++G
Sbjct: 4  LLFSGGKDSSLAALILKKLGYDVKLITVNFG 34


>gi|332298300|ref|YP_004440222.1| tRNA-specific 2-thiouridylase mnmA [Treponema brennaborense DSM
          12168]
 gi|332181403|gb|AEE17091.1| tRNA-specific 2-thiouridylase mnmA [Treponema brennaborense DSM
          12168]
          Length = 452

 Score = 42.6 bits (98), Expect = 0.050,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 23/74 (31%), Gaps = 9/74 (12%)

Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK---------KIVELMP 65
           SGG DS+       +R   V  ++      +         VR           I +   
Sbjct: 19 MSGGVDSTLVAILLKERGCNVIGVTMSSWNDDMPLPHSADGVRSSCYGPDEQVDIAQCES 78

Query: 66 KWKDSLGEDHILPL 79
            K+   E H++ +
Sbjct: 79 FCKEHDIEYHVIDV 92


>gi|330964160|gb|EGH64420.1| tRNA(Ile)-lysidine synthetase [Pseudomonas syringae pv.
          actinidiae str. M302091]
          Length = 441

 Score = 42.6 bits (98), Expect = 0.050,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 21/64 (32%), Gaps = 7/64 (10%)

Query: 15 FSGGQDSSTCLSWALDRFDR-----VETLSFDYGQRNK--VELECRLCVRKKIVELMPKW 67
          FSGG DS+  L    +   R     +  +   +G +       E    V + +       
Sbjct: 28 FSGGLDSTVLLHLLAELARRESLPALHAIHVHHGLQAAADAWPEHCRQVCQALDVAFELV 87

Query: 68 KDSL 71
          +  +
Sbjct: 88 RVKV 91


>gi|330872710|gb|EGH06859.1| tRNA(Ile)-lysidine synthetase [Pseudomonas syringae pv.
          morsprunorum str. M302280PT]
          Length = 441

 Score = 42.6 bits (98), Expect = 0.050,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 21/64 (32%), Gaps = 7/64 (10%)

Query: 15 FSGGQDSSTCLSWALDRFDR-----VETLSFDYGQRNK--VELECRLCVRKKIVELMPKW 67
          FSGG DS+  L    +   R     +  +   +G +       E    V + +       
Sbjct: 28 FSGGLDSTVLLHLLAELARRESLPALHAIHVHHGLQAAADAWPEHCRQVCQALDVAFELV 87

Query: 68 KDSL 71
          +  +
Sbjct: 88 RVKV 91


>gi|297617305|ref|YP_003702464.1| Queuosine synthesis [Syntrophothermus lipocalidus DSM 12680]
 gi|297145142|gb|ADI01899.1| Queuosine synthesis [Syntrophothermus lipocalidus DSM 12680]
          Length = 326

 Score = 42.6 bits (98), Expect = 0.050,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 27/97 (27%), Gaps = 2/97 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            A+ LFSGG DS   +    ++   V    F        E        + +   +     
Sbjct: 2   KAVSLFSGGLDSQLAVCVVKEQGIEVVGAHFKTPFFGGDEHVA--EAARNLGIELLVLDR 59

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT 106
           S     +L     G   H +   +    +  +     
Sbjct: 60  SDEYLEVLKNPRYGYGKHMNPCTDCHGFMLKHTGHLM 96


>gi|228989271|ref|ZP_04149264.1| tRNA(Ile)-lysidine synthase [Bacillus pseudomycoides DSM 12442]
 gi|228770481|gb|EEM19052.1| tRNA(Ile)-lysidine synthase [Bacillus pseudomycoides DSM 12442]
          Length = 480

 Score = 42.6 bits (98), Expect = 0.050,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 55/195 (28%), Gaps = 21/195 (10%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D+++K  + ++  SGG DS   L + L++                 E +    V   +  
Sbjct: 21  DVLEKHSTIVVGVSGGPDSLALLYYLLEK----------------REEKKLKIVVAHVDH 64

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +     D   ED      +   I     T  + +                     F   +
Sbjct: 65  MFR--GDESYEDLQFVENLCRKIGVICETIRINVSQYQQQYGMNAQVAARECRYAFLERI 122

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKKYE 179
             +     + +G    D       R       +    + ++       V  PL+ + K E
Sbjct: 123 MKKYDARYVALGHHGDDQMETILMRLVRGSTPKGYAGIAVKRPFHSGYVIRPLLAVTKEE 182

Query: 180 TWKLAQDIGGQDLVN 194
                + +G    ++
Sbjct: 183 INAYCKRLGVTPRMD 197


>gi|331267207|ref|YP_004326837.1| argininosuccinate synthase [Streptococcus oralis Uo5]
 gi|326683879|emb|CBZ01497.1| argininosuccinate synthase [Streptococcus oralis Uo5]
          Length = 398

 Score = 42.6 bits (98), Expect = 0.051,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 55/216 (25%), Gaps = 34/216 (15%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               +L +SGG D+S  ++W       V  +  D G     +LE       K+       
Sbjct: 3   KEKVILAYSGGLDTSVAITWLKKD-YDVIAVCMDVG--EGKDLEFIHDKALKVGA----- 54

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-LAYRL 126
                E +++ +    +   +                   V   +   +      +A++ 
Sbjct: 55  ----VESYVIDV---KEEFANDYVLVALQAHAYYEQKYPLVSALSRPLISKKLVEIAHQT 107

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G T I  G                     +   L     V          + E  + A++
Sbjct: 108 GATTIAHGCTGKGNDQVRFE--------VSIAALDPNLKVVAPVREWKWSREEEIQYAKE 159

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYG--CNS 220
            G     +L               +  WG    C  
Sbjct: 160 NGVPVPADLD--------NPYSVDQNLWGRANECGV 187


>gi|324008219|gb|EGB77438.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 57-2]
          Length = 432

 Score = 42.6 bits (98), Expect = 0.051,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 26/76 (34%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
          +N  +  +   L+ FSGG DS+  L   +        ++      +           K  
Sbjct: 5  LNRQLLSSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHGLSANADAWVKHC 64

Query: 61 VELMPKWKDSLGEDHI 76
            +  +W+  L  + +
Sbjct: 65 ENICQQWQVPLVVERV 80


>gi|315612255|ref|ZP_07887169.1| argininosuccinate synthase [Streptococcus sanguinis ATCC 49296]
 gi|315315648|gb|EFU63686.1| argininosuccinate synthase [Streptococcus sanguinis ATCC 49296]
          Length = 398

 Score = 42.6 bits (98), Expect = 0.051,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 55/216 (25%), Gaps = 34/216 (15%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               +L +SGG D+S  ++W       V  +  D G     +LE       K+       
Sbjct: 3   KEKVILAYSGGLDTSVAITWLKKD-YDVIAVCMDVG--EGKDLEFIHDKALKVGA----- 54

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-LAYRL 126
                E +++ +    +   +                   V   +   +      +A++ 
Sbjct: 55  ----VESYVIDV---KEEFANDYVLVALQAHAYYEQKYPLVSALSRPLISKKLVEIAHQT 107

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G T I  G                     +   L     V          + E  + A++
Sbjct: 108 GATTIAHGCTGKGNDQVRFE--------VSIAALDPNLKVVAPVREWKWSREEEIQYAKE 159

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYG--CNS 220
            G     +L               +  WG    C  
Sbjct: 160 NGVPVPADLD--------NPYSVDQNLWGRANECGV 187


>gi|315294592|gb|EFU53939.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 153-1]
          Length = 437

 Score = 42.6 bits (98), Expect = 0.051,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 26/76 (34%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
          +N  +  +   L+ FSGG DS+  L   +        ++      +           K  
Sbjct: 5  LNRQLLSSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHGLSANADAWVKHC 64

Query: 61 VELMPKWKDSLGEDHI 76
            +  +W+  L  + +
Sbjct: 65 ENICQQWQVPLVVERV 80


>gi|306826065|ref|ZP_07459401.1| argininosuccinate synthase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304431781|gb|EFM34761.1| argininosuccinate synthase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 398

 Score = 42.6 bits (98), Expect = 0.051,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 55/216 (25%), Gaps = 34/216 (15%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               +L +SGG D+S  ++W       V  +  D G     +LE       K+       
Sbjct: 3   KEKVILAYSGGLDTSVAITWLKKD-YDVIAVCMDVG--EGKDLEFIHDKALKVGA----- 54

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-LAYRL 126
                E +++ +    +   +                   V   +   +      +A++ 
Sbjct: 55  ----VESYVIDV---KEEFANDYVLVALQAHAYYEQKYPLVSALSRPLISKKLVEIAHQT 107

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G T I  G                     +   L     V          + E  + A++
Sbjct: 108 GATTIAHGCTGKGNDQVRFE--------VSIAALDPNLKVVAPVREWKWSREEEIQYAKE 159

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYG--CNS 220
            G     +L               +  WG    C  
Sbjct: 160 NGVPVPADLD--------NPYSVDQNLWGRANECGV 187


>gi|300990435|ref|ZP_07179203.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 200-1]
 gi|300305735|gb|EFJ60255.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 200-1]
          Length = 437

 Score = 42.6 bits (98), Expect = 0.051,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 26/76 (34%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
          +N  +  +   L+ FSGG DS+  L   +        ++      +           K  
Sbjct: 5  LNRQLLSSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHGLSANADAWVKHC 64

Query: 61 VELMPKWKDSLGEDHI 76
            +  +W+  L  + +
Sbjct: 65 ENICQQWQVPLVVERV 80


>gi|293364415|ref|ZP_06611141.1| argininosuccinate synthase [Streptococcus oralis ATCC 35037]
 gi|307702620|ref|ZP_07639572.1| argininosuccinate synthase [Streptococcus oralis ATCC 35037]
 gi|291317261|gb|EFE57688.1| argininosuccinate synthase [Streptococcus oralis ATCC 35037]
 gi|307623736|gb|EFO02721.1| argininosuccinate synthase [Streptococcus oralis ATCC 35037]
          Length = 398

 Score = 42.6 bits (98), Expect = 0.051,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 55/216 (25%), Gaps = 34/216 (15%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               +L +SGG D+S  ++W       V  +  D G     +LE       K+       
Sbjct: 3   KEKVILAYSGGLDTSVAITWLKKD-YDVIAVCMDVG--EGKDLEFIHDKALKVGA----- 54

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-LAYRL 126
                E +++ +    +   +                   V   +   +      +A++ 
Sbjct: 55  ----VESYVIDV---KEEFANDYVLVALQAHAYYEQKYPLVSALSRPLISKKLVEIAHQT 107

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G T I  G                     +   L     V          + E  + A++
Sbjct: 108 GATTIAHGCTGKGNDQVRFE--------VSIAALDPNLKVVAPVREWKWSREEEIQYAKE 159

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYG--CNS 220
            G     +L               +  WG    C  
Sbjct: 160 NGVPVPADLD--------NPYSVDQNLWGRANECGV 187


>gi|331645331|ref|ZP_08346442.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
          (tRNA(Ile)-2-lysyl-cytidine synthase) [Escherichia coli
          M605]
 gi|281177413|dbj|BAI53743.1| cell cycle protein [Escherichia coli SE15]
 gi|330910038|gb|EGH38548.1| tRNA(Ile)-lysidine synthetase [Escherichia coli AA86]
 gi|331046088|gb|EGI18207.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
          (tRNA(Ile)-2-lysyl-cytidine synthase) [Escherichia coli
          M605]
          Length = 437

 Score = 42.6 bits (98), Expect = 0.051,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 26/76 (34%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
          +N  +  +   L+ FSGG DS+  L   +        ++      +           K  
Sbjct: 5  LNRQLLSSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHGLSANADAWVKHC 64

Query: 61 VELMPKWKDSLGEDHI 76
            +  +W+  L  + +
Sbjct: 65 ENICQQWQVPLVVERV 80


>gi|222032018|emb|CAP74757.1| tRNA(Ile)-lysidine synthase [Escherichia coli LF82]
 gi|312944796|gb|ADR25623.1| tRNA(Ile)-lysidine synthetase [Escherichia coli O83:H1 str. NRG
          857C]
          Length = 432

 Score = 42.6 bits (98), Expect = 0.051,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 26/76 (34%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
          +N  +  +   L+ FSGG DS+  L   +        ++      +           K  
Sbjct: 5  LNRQLLSSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHGLSANADAWVKHC 64

Query: 61 VELMPKWKDSLGEDHI 76
            +  +W+  L  + +
Sbjct: 65 ENICQQWQVPLVVERV 80


>gi|218688063|ref|YP_002396275.1| tRNA(Ile)-lysidine synthetase [Escherichia coli ED1a]
 gi|331681573|ref|ZP_08382210.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
          (tRNA(Ile)-2-lysyl-cytidine synthase) [Escherichia coli
          H299]
 gi|218425627|emb|CAR06413.1| tRNA(Ile)-lysidine synthetase [Escherichia coli ED1a]
 gi|315300660|gb|EFU59887.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 16-3]
 gi|331081794|gb|EGI52955.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
          (tRNA(Ile)-2-lysyl-cytidine synthase) [Escherichia coli
          H299]
          Length = 437

 Score = 42.6 bits (98), Expect = 0.051,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 26/76 (34%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
          +N  +  +   L+ FSGG DS+  L   +        ++      +           K  
Sbjct: 5  LNRQLLSSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHGLSANADAWVKHC 64

Query: 61 VELMPKWKDSLGEDHI 76
            +  +W+  L  + +
Sbjct: 65 ENICQQWQVPLVVERV 80


>gi|194016061|ref|ZP_03054676.1| GMP synthase [glutamine-hydrolyzing] (Glutamineamidotransferase)
           (GMP synthetase) [Bacillus pumilus ATCC 7061]
 gi|194012416|gb|EDW21983.1| GMP synthase [glutamine-hydrolyzing] (Glutamineamidotransferase)
           (GMP synthetase) [Bacillus pumilus ATCC 7061]
          Length = 513

 Score = 42.6 bits (98), Expect = 0.051,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 52/184 (28%), Gaps = 20/184 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 219 KQVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFNMN 275

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       L  L  +       +   K +       +V       L          G
Sbjct: 276 VIKVDAKDRF-LNKLKGV------SDPEQKRKIIGNEFIYVFDDESDKL---------KG 319

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 320 IDYLAQGTLYTDIIESGTATAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRALGSEL 379

Query: 188 GGQD 191
           G  D
Sbjct: 380 GIPD 383


>gi|157691340|ref|YP_001485802.1| GMP synthase [Bacillus pumilus SAFR-032]
 gi|226738387|sp|A8FAH5|GUAA_BACP2 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|157680098|gb|ABV61242.1| GMP synthase (glutamine-hydrolyzing) [Bacillus pumilus SAFR-032]
          Length = 513

 Score = 42.6 bits (98), Expect = 0.051,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 52/184 (28%), Gaps = 20/184 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E      V K   E     
Sbjct: 219 KQVLCALSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGE---AEGVMKTFSEGFNMN 275

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       L  L  +       +   K +       +V       L          G
Sbjct: 276 VIKVDAKDRF-LNKLKGV------SDPEQKRKIIGNEFIYVFDDESDKL---------KG 319

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 320 IDYLAQGTLYTDIIESGTATAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRALGSEL 379

Query: 188 GGQD 191
           G  D
Sbjct: 380 GIPD 383


>gi|121586235|ref|ZP_01676025.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae 2740-80]
 gi|153829935|ref|ZP_01982602.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae 623-39]
 gi|121549501|gb|EAX59527.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae 2740-80]
 gi|148874570|gb|EDL72705.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae 623-39]
          Length = 440

 Score = 42.6 bits (98), Expect = 0.051,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 17/52 (32%), Gaps = 4/52 (7%)

Query: 10 SALLLFSGGQDSSTCLSWALDR----FDRVETLSFDYGQRNKVELECRLCVR 57
            LL  SGG DS   L+            V  +   +G     +   + C R
Sbjct: 19 KILLALSGGVDSRVLLALLARGRDEFGWDVAAVHVHHGLSPNADKWAQHCQR 70


>gi|91209258|ref|YP_539244.1| tRNA(Ile)-lysidine synthetase [Escherichia coli UTI89]
 gi|117622473|ref|YP_851386.1| tRNA(Ile)-lysidine synthetase [Escherichia coli APEC O1]
 gi|218557129|ref|YP_002390042.1| tRNA(Ile)-lysidine synthetase [Escherichia coli S88]
 gi|237704347|ref|ZP_04534828.1| tRNA(Ile)-lysidine synthetase [Escherichia sp. 3_2_53FAA]
 gi|331661259|ref|ZP_08362191.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
          (tRNA(Ile)-2-lysyl-cytidine synthase) [Escherichia coli
          TA206]
 gi|91070832|gb|ABE05713.1| putative cell cycle protein MesJ [Escherichia coli UTI89]
 gi|115511597|gb|ABI99671.1| putative cell cycle protein MesJ [Escherichia coli APEC O1]
 gi|218363898|emb|CAR01563.1| tRNA(Ile)-lysidine synthetase [Escherichia coli S88]
 gi|226902259|gb|EEH88518.1| tRNA(Ile)-lysidine synthetase [Escherichia sp. 3_2_53FAA]
 gi|294494175|gb|ADE92931.1| tRNA(Ile)-lysidine synthase [Escherichia coli IHE3034]
 gi|307629764|gb|ADN74068.1| tRNA(Ile)-lysidine synthetase [Escherichia coli UM146]
 gi|315285280|gb|EFU44725.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 110-3]
 gi|323950813|gb|EGB46690.1| PP-loop family protein [Escherichia coli H252]
 gi|323955070|gb|EGB50846.1| PP-loop family protein [Escherichia coli H263]
 gi|331052301|gb|EGI24340.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
          (tRNA(Ile)-2-lysyl-cytidine synthase) [Escherichia coli
          TA206]
          Length = 432

 Score = 42.6 bits (98), Expect = 0.051,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 26/76 (34%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
          +N  +  +   L+ FSGG DS+  L   +        ++      +           K  
Sbjct: 5  LNRQLLSSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHGLSANADAWVKHC 64

Query: 61 VELMPKWKDSLGEDHI 76
            +  +W+  L  + +
Sbjct: 65 ENICQQWQVPLVVERV 80


>gi|26246135|ref|NP_752174.1| tRNA(Ile)-lysidine synthetase [Escherichia coli CFT073]
 gi|227884899|ref|ZP_04002704.1| PP-loop superfamily ATPase [Escherichia coli 83972]
 gi|300993591|ref|ZP_07180447.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 45-1]
 gi|301049898|ref|ZP_07196824.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 185-1]
 gi|61216659|sp|Q8FL00|TILS_ECOL6 RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
          Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
          Full=tRNA(Ile)-lysidine synthetase
 gi|26106532|gb|AAN78718.1|AE016755_218 Putative cell cycle protein mesJ [Escherichia coli CFT073]
 gi|227838037|gb|EEJ48503.1| PP-loop superfamily ATPase [Escherichia coli 83972]
 gi|300298351|gb|EFJ54736.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 185-1]
 gi|300406514|gb|EFJ90052.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 45-1]
 gi|307552038|gb|ADN44813.1| tRNA(Ile)-lysidine synthase [Escherichia coli ABU 83972]
          Length = 437

 Score = 42.6 bits (98), Expect = 0.051,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 26/76 (34%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
          +N  +  +   L+ FSGG DS+  L   +        ++      +           K  
Sbjct: 5  LNRQLLSSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHGLSANADAWVKHC 64

Query: 61 VELMPKWKDSLGEDHI 76
            +  +W+  L  + +
Sbjct: 65 ENICQQWQVPLVVERV 80


>gi|110640407|ref|YP_668135.1| tRNA(Ile)-lysidine synthetase [Escherichia coli 536]
 gi|191172763|ref|ZP_03034300.1| tRNA(Ile)-lysidine synthase [Escherichia coli F11]
 gi|110341999|gb|ABG68236.1| putative cell cycle protein MesJ [Escherichia coli 536]
 gi|190906913|gb|EDV66515.1| tRNA(Ile)-lysidine synthase [Escherichia coli F11]
          Length = 437

 Score = 42.6 bits (98), Expect = 0.051,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 26/76 (34%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
          +N  +  +   L+ FSGG DS+  L   +        ++      +           K  
Sbjct: 5  LNRQLLSSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHGLSANADAWVKHC 64

Query: 61 VELMPKWKDSLGEDHI 76
            +  +W+  L  + +
Sbjct: 65 ENICQQWQVPLVVERV 80


>gi|299138824|ref|ZP_07032001.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acidobacterium sp. MP5ACTX8]
 gi|298598978|gb|EFI55139.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Acidobacterium sp. MP5ACTX8]
          Length = 375

 Score = 42.6 bits (98), Expect = 0.051,   Method: Composition-based stats.
 Identities = 19/152 (12%), Positives = 43/152 (28%), Gaps = 11/152 (7%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQR----NKVELEC---RLCV 56
           +    +  +  SGG DSS   +        +  L+   + QR     +   E    R C 
Sbjct: 1   MPLNNTIAVAMSGGVDSSAVAALLHAEGRDLIGLTLQLWNQRRLAGREGMPETVQGRCCS 60

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
              + +     +      +++      +   + + +    +      P       N +  
Sbjct: 61  IDDVYDARRVAEQIGIPYYLVN---AQERFENEVVRPFVDEYLAGRTPIPCTLCNNHLKF 117

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRH 148
                 A ++G   I  G    ++      R 
Sbjct: 118 DQLLLTARQIGADRIATGHYARNHYDEARERW 149


>gi|298376473|ref|ZP_06986428.1| conserved hypothetical protein [Bacteroides sp. 3_1_19]
 gi|298266351|gb|EFI08009.1| conserved hypothetical protein [Bacteroides sp. 3_1_19]
          Length = 233

 Score = 42.6 bits (98), Expect = 0.051,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 61/226 (26%), Gaps = 48/226 (21%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRV-ETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +LL+SGG DS     W +D+  +    L  D   R   E   R             
Sbjct: 7   NKK-VLLYSGGMDS-----WLIDKLWKPDIRLYVDMNTRYSKEEMKR------------- 47

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               L +D I+    L                         +    +I +         L
Sbjct: 48  ----LPDDTIIERLDLSKWEREDKIIP--------------LRNMYLIGIATNYGDEICL 89

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G T     + ++               +    +   +  + ++       K E  K    
Sbjct: 90  GATAGDRVLDKSPVFAELYEDLLGY--LYQKQHWTEKRTIKINLDYKAYTKTELLKQYIA 147

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYLRQKGWM 232
            GG   ++     S +CY          G+ C +C  C+ +   + 
Sbjct: 148 QGGN--ISEAFSSSFSCYAPVD------GHECWNCKPCFRKFIAFA 185


>gi|225023654|ref|ZP_03712846.1| hypothetical protein EIKCOROL_00517 [Eikenella corrodens ATCC
           23834]
 gi|224943536|gb|EEG24745.1| hypothetical protein EIKCOROL_00517 [Eikenella corrodens ATCC
           23834]
          Length = 492

 Score = 42.6 bits (98), Expect = 0.051,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 64  IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAQNARLID 120


>gi|223987646|ref|YP_002601114.1| GMP synthase [glutamine-hydrolyzing] (Glutamineamidotransferase)
           [Borrelia burgdorferi 64b]
 gi|223929636|gb|ACN24346.1| GMP synthase [glutamine-hydrolyzing] (Glutamineamidotransferase)
           [Borrelia burgdorferi 64b]
          Length = 511

 Score = 42.6 bits (98), Expect = 0.051,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 52/187 (27%), Gaps = 19/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DS  C           +  +  + G   K E        KKI+EL  +
Sbjct: 215 NKKVILGLSGGTDSLVCALLIKKAINKNLICVFVNTGLLRKNED-------KKILELKHQ 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  ++   +     +    + S   +   +  ++       +   +      A    Y  
Sbjct: 268 YDLNIKYINASTKFLNRLKNISDPEEKRKIIGKEFVDVFEKITLEDQNIEYLAQGTIYSD 327

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I +       +    + +      +     +    E             K E  ++  +
Sbjct: 328 VIESKSKDSSSSKIKSHHNVGGLPDKMSLKLLEPLNEFF-----------KDEIIQIGIN 376

Query: 187 IGGQDLV 193
           +G +   
Sbjct: 377 LGIKKES 383


>gi|254459568|ref|ZP_05072984.1| GMP synthase (glutamine-hydrolyzing) [Rhodobacterales bacterium
           HTCC2083]
 gi|206676157|gb|EDZ40644.1| GMP synthase (glutamine-hydrolyzing) [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 524

 Score = 42.6 bits (98), Expect = 0.051,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 54/183 (29%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS       +   D++  +  D+G   K E         ++V +    
Sbjct: 227 KKVICGLSGGVDSSVAAVLIHEAIGDQLTCVFVDHGLLRKGE-------ADEVVSMFRDN 279

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +            LG++       +     +        +              A  L 
Sbjct: 280 YNMHFIHAEEQELFLGEL-------DGQDDPETKRKIIGRLFIDVFQKYAGQIDGAEFLA 332

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   V E+    +      TI++      L  +  + +  PL  L K E   L +++
Sbjct: 333 QGTLYPDVIESV--SFSGGPSVTIKSHHNVGGLPEKMGLKLVEPLRELFKDEVRALGREL 390

Query: 188 GGQ 190
           G  
Sbjct: 391 GLP 393


>gi|205822073|sp|A7NK07|MNMA_ROSCS RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 371

 Score = 42.6 bits (98), Expect = 0.051,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 27/68 (39%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            ++  SGG DSS   +   +    V  ++    + +   L   LC  +++ E   +   
Sbjct: 3  KIMIAMSGGVDSSLAAALLHEAGHDVTGVTLHLWEGDDDRLAESLCCSQEMTESARRVCA 62

Query: 70 SLGEDHIL 77
           LG  + +
Sbjct: 63 QLGIPYYV 70


>gi|327488234|sp|P0CL64|GUAA_BORBU RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
          Length = 511

 Score = 42.6 bits (98), Expect = 0.052,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 57/187 (30%), Gaps = 19/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +L  SGG DS  C         + +  +  + G   K E        KKI+EL  +
Sbjct: 215 SKKVILGLSGGTDSLVCALLIKKAINENLICVFVNTGLLRKNED-------KKILELKHQ 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  +      +          + L      + +   +   FV     I L         L
Sbjct: 268 YDLN------IKYIDASTKFLNRLKNISDPEEKRKIIGKEFVDVFEKITLEDQNI--EYL 319

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+            I++      L  +  + +  PL    K E  ++  +
Sbjct: 320 AQGTIYSDVIESKSKDSS---SSKIKSHHNVGGLPDKMSLKLLEPLNEFFKDEIIQIGIN 376

Query: 187 IGGQDLV 193
           +G +   
Sbjct: 377 LGIKKES 383


>gi|325279322|ref|YP_004251864.1| GMP synthase (glutamine-hydrolyzing) [Odoribacter splanchnicus DSM
           20712]
 gi|324311131|gb|ADY31684.1| GMP synthase (glutamine-hydrolyzing) [Odoribacter splanchnicus DSM
           20712]
          Length = 509

 Score = 42.6 bits (98), Expect = 0.052,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 53/184 (28%), Gaps = 19/184 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DS+             +  +  D G   K E +  L   K++   +   
Sbjct: 214 DRVILGLSGGVDSTVAAMLLHRAVGKNLTCIFVDNGLLRKDEYKTVLENYKELG--LNVV 271

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
               G+  +  LA + +              +                       A  LG
Sbjct: 272 GAESGDLFLGRLAGVTE-------------PEKKRKIIGSTFIDVFDQEASKIEDAKWLG 318

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I   V E+     P      I++      L     + +  PL  L K E  ++ + +
Sbjct: 319 QGTIYPDVIESLSVNGPSQT---IKSHHNVGGLPDYMKLKLVEPLRLLFKDEVRRVGKSL 375

Query: 188 GGQD 191
           G  D
Sbjct: 376 GLPD 379


>gi|298675437|ref|YP_003727187.1| GMP synthase large subunit [Methanohalobium evestigatum Z-7303]
 gi|298288425|gb|ADI74391.1| GMP synthase, large subunit [Methanohalobium evestigatum Z-7303]
          Length = 304

 Score = 42.6 bits (98), Expect = 0.052,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELEC 52
           A++  SGG DSS C   A +   D +  +  + G   K E E 
Sbjct: 22 KAIIALSGGVDSSVCTVLAHNAIGDNLVPIYIETGLMRKGETER 65


>gi|224591445|ref|YP_002640779.1| GMP synthase [Borrelia burgdorferi WI91-23]
 gi|224553788|gb|ACN55189.1| GMP synthase [Borrelia burgdorferi WI91-23]
          Length = 512

 Score = 42.6 bits (98), Expect = 0.052,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 57/187 (30%), Gaps = 19/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +L  SGG DS  C         + +  +  + G   K E        KKI+EL  +
Sbjct: 216 SKKVILGLSGGTDSLVCALLIKKAINENLICVFVNTGLLRKNEN-------KKILELKHQ 268

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  +      +          + L      + +   +   FV     I L         L
Sbjct: 269 YDLN------IKYIDASTKFLNRLKNISDPEEKRKIIGKEFVDVFEKITLEDQNI--EYL 320

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+            I++      L  +  + +  PL    K E  ++  +
Sbjct: 321 AQGTIYSDVIESKSKDSS---SSKIKSHHNVGGLPDKMSLKLLEPLNEFFKDEIIQIGIN 377

Query: 187 IGGQDLV 193
           +G +   
Sbjct: 378 LGIKKES 384


>gi|226246821|ref|YP_002776133.1| GMP synthase [Borrelia burgdorferi 29805]
 gi|226201716|gb|ACO38308.1| GMP synthase [Borrelia burgdorferi 29805]
          Length = 511

 Score = 42.6 bits (98), Expect = 0.052,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 52/187 (27%), Gaps = 19/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DS  C           +  +  + G   K E        KKI+EL  +
Sbjct: 215 NKKVILGLSGGTDSLVCALLIKKAINKNLICVFVNTGLLRKNED-------KKILELKHQ 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  ++   +     +    + S   +   +  ++       +   +      A    Y  
Sbjct: 268 YDLNIKYINASTKFLNRLKNISDPEEKRKIIGKEFVDVFEKITLEDQNIEYLAQGTIYSD 327

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I +       +    + +      +     +    E             K E  ++  +
Sbjct: 328 VIESKSKDSSSSKIKSHHNVGGLPDKMSLKLLEPLNEFF-----------KDEIIQIGIN 376

Query: 187 IGGQDLV 193
           +G +   
Sbjct: 377 LGIKKES 383


>gi|225576228|ref|YP_002725245.1| GMP synthase [Borrelia burgdorferi 94a]
 gi|225546166|gb|ACN92180.1| GMP synthase [Borrelia burgdorferi 94a]
          Length = 511

 Score = 42.6 bits (98), Expect = 0.052,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 52/187 (27%), Gaps = 19/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DS  C           +  +  + G   K E        KKI+EL  +
Sbjct: 215 NKKVILGLSGGTDSLVCALLIKKAINKNLICVFVNTGLLRKNED-------KKILELKHQ 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  ++   +     +    + S   +   +  ++       +   +      A    Y  
Sbjct: 268 YDLNIKYINASTKFLNRLKNISDPEEKRKIIGKEFVDVFEKITLEDQNIEYLAQGTIYSD 327

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I +       +    + +      +     +    E             K E  ++  +
Sbjct: 328 VIESKSKDSSSSKIKSHHNVGGLPDKMSLKLLEPLNEFF-----------KDEIIQIGIN 376

Query: 187 IGGQDLV 193
           +G +   
Sbjct: 377 LGIKKES 383


>gi|143012|gb|AAA22497.1| GMP synthetase [Bacillus subtilis]
          Length = 513

 Score = 42.6 bits (98), Expect = 0.052,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 54/187 (28%), Gaps = 22/187 (11%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L   SGG DSS           D++  +  D+G   K E E                
Sbjct: 220 KQVLCGLSGGVDSSVVAVLIHKAIGDQLTCIFVDHGLLRKGERE---------------- 263

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL- 126
               G           ++           K++  + P          F+      A +L 
Sbjct: 264 ----GVMKTFSEGFNMNVIKVDAKDRFLNKLKGVSDPEQKRKIIGNEFIYVFDDEADKLK 319

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI  +  G   TD          TI++      L  +    +  PL  L K E   L  +
Sbjct: 320 GIDYLAQGTLYTDIIESGTATAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRALGTE 379

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 380 LGIPDEI 386


>gi|115497124|ref|NP_001069121.1| asparagine synthetase [glutamine-hydrolyzing] [Bos taurus]
 gi|119361252|sp|Q1LZA3|ASNS_BOVIN RecName: Full=Asparagine synthetase [glutamine-hydrolyzing];
           AltName: Full=Glutamine-dependent asparagine synthetase
 gi|94534952|gb|AAI16124.1| Asparagine synthetase [Bos taurus]
 gi|296488677|gb|DAA30790.1| asparagine synthetase [Bos taurus]
          Length = 561

 Score = 42.6 bits (98), Expect = 0.052,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 34/127 (26%), Gaps = 4/127 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRV---ETL-SFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            L SGG DSS   +  L +         L +F  G  +  +L     V   I     +  
Sbjct: 255 CLLSGGLDSSLVAATLLKQLKEAQVQYPLQTFAIGMEDSPDLLAARKVANHIGSEHHEVL 314

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  E   +   ++  +    +T   A                +++      +     G 
Sbjct: 315 FNSEEGIQVLDEVIFSLETYDITTVRASVGMYLISKYIRKNTDSVVIFSGEGSDELTQGY 374

Query: 129 TNIVIGV 135
                  
Sbjct: 375 IYFHKAP 381


>gi|11497008|ref|NP_047004.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Borrelia burgdorferi B31]
 gi|2689885|gb|AAC66313.1| GMP synthase (guaA) [Borrelia burgdorferi B31]
          Length = 528

 Score = 42.6 bits (98), Expect = 0.052,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 57/187 (30%), Gaps = 19/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +L  SGG DS  C         + +  +  + G   K E        KKI+EL  +
Sbjct: 232 SKKVILGLSGGTDSLVCALLIKKAINENLICVFVNTGLLRKNED-------KKILELKHQ 284

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  +      +          + L      + +   +   FV     I L         L
Sbjct: 285 YDLN------IKYIDASTKFLNRLKNISDPEEKRKIIGKEFVDVFEKITLEDQNI--EYL 336

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+            I++      L  +  + +  PL    K E  ++  +
Sbjct: 337 AQGTIYSDVIESKSKDSS---SSKIKSHHNVGGLPDKMSLKLLEPLNEFFKDEIIQIGIN 393

Query: 187 IGGQDLV 193
           +G +   
Sbjct: 394 LGIKKES 400


>gi|332095129|gb|EGJ00161.1| tRNA(Ile)-lysidine synthase [Shigella boydii 5216-82]
          Length = 432

 Score = 42.6 bits (98), Expect = 0.052,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 5/60 (8%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYGQRNKVELECRLC 55
          +N  +  +   L+ FSGG DS+  L   +          +  +   +G     +   R C
Sbjct: 5  LNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHGLSANADSWVRHC 64


>gi|312148637|gb|ADQ31292.1| GMP synthase (glutamine-hydrolyzing) [Borrelia burgdorferi JD1]
          Length = 511

 Score = 42.6 bits (98), Expect = 0.052,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 57/187 (30%), Gaps = 19/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +L  SGG DS  C         + +  +  + G   K E        KKI+EL  +
Sbjct: 215 SKKVILGLSGGTDSLVCALLIKKAINENLICVFVNTGLLRKNED-------KKILELKHQ 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  +      +          + L      + +   +   FV     I L         L
Sbjct: 268 YDLN------IKYIDASTKFLNRLKNISDPEEKRKIIGKEFVDVFEKITLEDQNI--EYL 319

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+            I++      L  +  + +  PL    K E  ++  +
Sbjct: 320 AQGTIYSDVIESKSKDSS---SSKIKSHHNVGGLPDKMSLKLLEPLNEFFKDEIIQIGIN 376

Query: 187 IGGQDLV 193
           +G +   
Sbjct: 377 LGIKKES 383


>gi|304312484|ref|YP_003812082.1| Predicted tRNA(Ile)-lysidine synthetase [gamma proteobacterium
          HdN1]
 gi|301798217|emb|CBL46439.1| Predicted tRNA(Ile)-lysidine synthetase [gamma proteobacterium
          HdN1]
          Length = 463

 Score = 42.6 bits (98), Expect = 0.052,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 23/71 (32%), Gaps = 6/71 (8%)

Query: 12 LLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCV--RKKIVELMP 65
          L+ FSGG DS+  L  A     +    +  +  ++          + CV   +     + 
Sbjct: 23 LVGFSGGLDSTVLLYLARRWSLQSSVPIVAVHVNHQLSAHAFAWQQHCVDLCEAWGIALH 82

Query: 66 KWKDSLGEDHI 76
               +    +
Sbjct: 83 CEAVHVDAHGV 93


>gi|269118886|ref|YP_003307063.1| NAD+ synthetase [Sebaldella termitidis ATCC 33386]
 gi|268612764|gb|ACZ07132.1| NAD+ synthetase [Sebaldella termitidis ATCC 33386]
          Length = 261

 Score = 42.6 bits (98), Expect = 0.052,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 35/117 (29%), Gaps = 9/117 (7%)

Query: 1   MNDIIKKA--PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCV 56
           M   ++ +     +L  SGG DSS     A + F    V  +   Y   +    E  L V
Sbjct: 19  MRREVRNSGFEKVILGLSGGIDSSLVAFLAKEAFGKKNVHGVIMPYRTSSPKSEEDALKV 78

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
            +       K      E   +  +       +S  +      ++       +  R+ 
Sbjct: 79  AE-----AAKISWEKVEITNMVDSYFSFFPDASPLRKGNRMARERMCILYDLSARDR 130


>gi|221317064|ref|YP_002533424.1| GMP synthase [glutamine-hydrolyzing] (Glutamineamidotransferase)
           [Borrelia burgdorferi 72a]
 gi|221237450|gb|ACM10287.1| GMP synthase [glutamine-hydrolyzing] (Glutamineamidotransferase)
           [Borrelia burgdorferi 72a]
          Length = 511

 Score = 42.6 bits (98), Expect = 0.052,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 57/187 (30%), Gaps = 19/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +L  SGG DS  C         + +  +  + G   K E        KKI+EL  +
Sbjct: 215 SKKVILGLSGGTDSLVCALLIKKAINENLICVFVNTGLLRKNED-------KKILELKHQ 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  +      +          + L      + +   +   FV     I L         L
Sbjct: 268 YDLN------IKYIDASTKFLNRLKNISDPEEKRKIIGKEFVDVFEKITLEDQNI--EYL 319

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+            I++      L  +  + +  PL    K E  ++  +
Sbjct: 320 AQGTIYSDVIESKSKDSS---SSKIKSHHNVGGLPDKMSLKLLEPLNEFFKDEIIQIGIN 376

Query: 187 IGGQDLV 193
           +G +   
Sbjct: 377 LGIKKES 383


>gi|193075024|gb|ACF08514.1| GuaA [Pseudomonas aeruginosa]
          Length = 281

 Score = 42.6 bits (98), Expect = 0.052,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 54/185 (29%), Gaps = 19/185 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMP 65
           +   LL  SGG DSS   +       D++  +  D G  R     +      + +   + 
Sbjct: 79  SSKVLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRLHEGDQVMAMFAENMGVKVI 138

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +            L  L  ++     + +  +             +++ FL         
Sbjct: 139 RANAEDK-----FLGRLAGVADPEEKRKIIGRTFIEVFDEEATKLQDVKFLAQGTIY--- 190

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                        + +G    +   I++      L  +    +  PL  L K E  K+  
Sbjct: 191 ---------PDVIESAGAKTGKAHVIKSHHNVGGLPEDMQFELVEPLRELFKDEVRKIGL 241

Query: 186 DIGGQ 190
           ++G  
Sbjct: 242 ELGLP 246


>gi|193075014|gb|ACF08509.1| GuaA [Pseudomonas aeruginosa]
 gi|193075016|gb|ACF08510.1| GuaA [Pseudomonas aeruginosa]
 gi|193075018|gb|ACF08511.1| GuaA [Pseudomonas aeruginosa]
 gi|193075020|gb|ACF08512.1| GuaA [Pseudomonas aeruginosa]
 gi|193075022|gb|ACF08513.1| GuaA [Pseudomonas aeruginosa]
 gi|193075026|gb|ACF08515.1| GuaA [Pseudomonas aeruginosa]
 gi|193075028|gb|ACF08516.1| GuaA [Pseudomonas aeruginosa]
 gi|193075030|gb|ACF08517.1| GuaA [Pseudomonas aeruginosa]
 gi|193075032|gb|ACF08518.1| GuaA [Pseudomonas aeruginosa]
 gi|193075034|gb|ACF08519.1| GuaA [Pseudomonas aeruginosa]
 gi|193075036|gb|ACF08520.1| GuaA [Pseudomonas aeruginosa]
 gi|193075038|gb|ACF08521.1| GuaA [Pseudomonas aeruginosa]
 gi|193075040|gb|ACF08522.1| GuaA [Pseudomonas aeruginosa]
 gi|193075042|gb|ACF08523.1| GuaA [Pseudomonas aeruginosa]
 gi|193075044|gb|ACF08524.1| GuaA [Pseudomonas aeruginosa]
 gi|193075046|gb|ACF08525.1| GuaA [Pseudomonas aeruginosa]
 gi|193075048|gb|ACF08526.1| GuaA [Pseudomonas aeruginosa]
 gi|193075050|gb|ACF08527.1| GuaA [Pseudomonas aeruginosa]
 gi|193075052|gb|ACF08528.1| GuaA [Pseudomonas aeruginosa]
 gi|193075054|gb|ACF08529.1| GuaA [Pseudomonas aeruginosa]
 gi|193075056|gb|ACF08530.1| GuaA [Pseudomonas aeruginosa]
 gi|193075058|gb|ACF08531.1| GuaA [Pseudomonas aeruginosa]
 gi|193075060|gb|ACF08532.1| GuaA [Pseudomonas aeruginosa]
 gi|193075064|gb|ACF08534.1| GuaA [Pseudomonas aeruginosa]
 gi|193075066|gb|ACF08535.1| GuaA [Pseudomonas aeruginosa]
 gi|193075068|gb|ACF08536.1| GuaA [Pseudomonas aeruginosa]
 gi|193075072|gb|ACF08538.1| GuaA [Pseudomonas aeruginosa]
 gi|193075074|gb|ACF08539.1| GuaA [Pseudomonas aeruginosa]
 gi|193075076|gb|ACF08540.1| GuaA [Pseudomonas aeruginosa]
 gi|193075078|gb|ACF08541.1| GuaA [Pseudomonas aeruginosa]
 gi|193075080|gb|ACF08542.1| GuaA [Pseudomonas aeruginosa]
          Length = 281

 Score = 42.6 bits (98), Expect = 0.052,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 54/185 (29%), Gaps = 19/185 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMP 65
           +   LL  SGG DSS   +       D++  +  D G  R     +      + +   + 
Sbjct: 79  SSKVLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRLHEGDQVMAMFAENMGVKVI 138

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +            L  L  ++     + +  +             +++ FL         
Sbjct: 139 RANAEDK-----FLGRLAGVADPEEKRKIIGRTFIEVFDEEATKLQDVKFLAQGTIY--- 190

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                        + +G    +   I++      L  +    +  PL  L K E  K+  
Sbjct: 191 ---------PDVIESAGAKTGKAHVIKSHHNVGGLPEDMQFELVEPLRELFKDEVRKIGL 241

Query: 186 DIGGQ 190
           ++G  
Sbjct: 242 ELGLP 246


>gi|225576389|ref|YP_002725400.1| GMP synthase [Borrelia sp. SV1]
 gi|225547503|gb|ACN93482.1| GMP synthase [Borrelia sp. SV1]
          Length = 511

 Score = 42.6 bits (98), Expect = 0.052,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 52/187 (27%), Gaps = 19/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DS  C         + +  +  + G   K E        KKI+EL  +
Sbjct: 215 NKKVILGLSGGTDSLVCALLIKKAINENLICVFINTGLLRKNED-------KKILELKHQ 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  ++         +    + S   +   +  ++       +   +      A    Y  
Sbjct: 268 YDLNIKYIDASTKFLNRLKNISDPEEKRKIIGKEFVDVFEKITLEDQNIEYLAQGTIYSD 327

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I +       +    + +      +     +    E             K E  ++  +
Sbjct: 328 VIESKSKNSSSSKIKSHHNVGGLPDKISLKLLEPLNEFF-----------KDEIIQIGIN 376

Query: 187 IGGQDLV 193
           +G +   
Sbjct: 377 LGIKKES 383


>gi|195942745|ref|ZP_03088127.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Borrelia burgdorferi 80a]
 gi|195942778|ref|ZP_03088160.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Borrelia burgdorferi 80a]
          Length = 467

 Score = 42.6 bits (98), Expect = 0.052,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 57/187 (30%), Gaps = 19/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +L  SGG DS  C         + +  +  + G   K E        KKI+EL  +
Sbjct: 171 SKKVILGLSGGTDSLVCALLIKKAINENLICVFVNTGLLRKNED-------KKILELKHQ 223

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  +      +          + L      + +   +   FV     I L         L
Sbjct: 224 YDLN------IKYIDASTKFLNRLKNISDPEEKRKIIGKEFVDVFEKITLEDQNI--EYL 275

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+            I++      L  +  + +  PL    K E  ++  +
Sbjct: 276 AQGTIYSDVIESKSKDSS---SSKIKSHHNVGGLPDKMSLKLLEPLNEFFKDEIIQIGIN 332

Query: 187 IGGQDLV 193
           +G +   
Sbjct: 333 LGIKKES 339


>gi|195942066|ref|ZP_03087448.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Borrelia burgdorferi 80a]
 gi|224593640|ref|YP_002640968.1| GMP synthase [Borrelia burgdorferi CA-11.2a]
 gi|327488233|sp|E4QHI6|GUAA_BORBN RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|224554924|gb|ACN56297.1| GMP synthase [Borrelia burgdorferi CA-11.2a]
 gi|312150015|gb|ADQ30075.1| GMP synthase (glutamine-hydrolyzing) [Borrelia burgdorferi N40]
          Length = 511

 Score = 42.6 bits (98), Expect = 0.052,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 57/187 (30%), Gaps = 19/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +L  SGG DS  C         + +  +  + G   K E        KKI+EL  +
Sbjct: 215 SKKVILGLSGGTDSLVCALLIKKAINENLICVFVNTGLLRKNEN-------KKILELKHQ 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  +      +          + L      + +   +   FV     I L         L
Sbjct: 268 YDLN------IKYIDASTKFLNRLKNISDPEEKRKIIGKEFVDVFEKITLEDQNI--EYL 319

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+            I++      L  +  + +  PL    K E  ++  +
Sbjct: 320 AQGTIYSDVIESKSKDSS---SSKIKSHHNVGGLPDKMSLKLLEPLNEFFKDEIIQIGIN 376

Query: 187 IGGQDLV 193
           +G +   
Sbjct: 377 LGIKKES 383


>gi|225576169|ref|YP_002725192.1| GMP synthase [Borrelia burgdorferi 118a]
 gi|225546901|gb|ACN92895.1| GMP synthase [Borrelia burgdorferi 118a]
          Length = 511

 Score = 42.6 bits (98), Expect = 0.052,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 57/187 (30%), Gaps = 19/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +L  SGG DS  C         + +  +  + G   K E        KKI+EL  +
Sbjct: 215 SKKVILGLSGGTDSLVCALLIKKAINENLICVFVNTGLLRKNED-------KKILELKHQ 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  +      +          + L      + +   +   FV     I L         L
Sbjct: 268 YDLN------IKYIDASTKFLNRLKNISDPEEKRKIIGKEFVDVFEKITLEDQNI--EYL 319

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+            I++      L  +  + +  PL    K E  ++  +
Sbjct: 320 AQGTIYSDVIESKSKDSS---SSKIKSHHNVGGLPDKMSLKLLEPLNEFFKDEIIQIGIN 376

Query: 187 IGGQDLV 193
           +G +   
Sbjct: 377 LGIKKES 383


>gi|495734|gb|AAA53232.1| GMP synthetase [Borrelia burgdorferi]
          Length = 512

 Score = 42.6 bits (98), Expect = 0.052,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 57/187 (30%), Gaps = 19/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +L  SGG DS  C         + +  +  + G   K E        KKI+EL  +
Sbjct: 216 SKKVILGLSGGTDSLVCALLIKKAINENLICVFVNTGLLRKNEN-------KKILELKHQ 268

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  +      +          + L      + +   +   FV     I L         L
Sbjct: 269 YDLN------IKYIDASTKFLNRLKNISDPEEKRKIIGKEFVDVFEKITLEDQNI--EYL 320

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+            I++      L  +  + +  PL    K E  ++  +
Sbjct: 321 AQGTIYSDVIESKSKDSS---SSKIKSHHNVGGLPDKMSLKLLEPLNEFFKDEIIQIGIN 377

Query: 187 IGGQDLV 193
           +G +   
Sbjct: 378 LGIKKES 384


>gi|325264332|ref|ZP_08131063.1| tRNA(Ile)-lysidine synthase [Clostridium sp. D5]
 gi|324030403|gb|EGB91687.1| tRNA(Ile)-lysidine synthase [Clostridium sp. D5]
          Length = 470

 Score = 42.6 bits (98), Expect = 0.053,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 34/127 (26%), Gaps = 8/127 (6%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALD----RFDRVETLSFDYGQRNKVELECRLCVRKK 59
           +I+     +   SGG DS   L   L         +  +  ++G R     E      + 
Sbjct: 13  MIENGDKVIAGISGGADSVCLLFVLLKLREEMGIEIVAVHVNHGLR----GEAAKRDEEF 68

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           + EL  + +           +I      S       ++ +          G  I      
Sbjct: 69  VQELCREHRVKCVVYRENVESISKKRKQSVEEAGRVVRREAFEKTLVECGGTKIAMAHHQ 128

Query: 120 ATLAYRL 126
              A  L
Sbjct: 129 NDNAETL 135


>gi|307707910|ref|ZP_07644385.1| tRNA(Ile)-lysidine synthase [Streptococcus mitis NCTC 12261]
 gi|307615975|gb|EFN95173.1| tRNA(Ile)-lysidine synthase [Streptococcus mitis NCTC 12261]
          Length = 425

 Score = 42.6 bits (98), Expect = 0.053,   Method: Composition-based stats.
 Identities = 22/173 (12%), Positives = 47/173 (27%), Gaps = 11/173 (6%)

Query: 6   KKAPSALLLFSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKVELECRL-CVRKKI 60
           KK    +L  SGG DS        ++  +    +     ++ QR + + E +        
Sbjct: 17  KKHAKVVLALSGGLDSMFLFKVLSTYQKELEIELILAHVNHKQRVESDWEEQELRKLAAE 76

Query: 61  VELMPKWKDSLGED-----HILPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            EL     +  GE               ++   +  T  V     D+ +    +      
Sbjct: 77  AELPIYISNFSGEFSEARARNFRYDFFQEVMKKTGATALVTAHHADDQVETILMRLIRGT 136

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
            L + + +  +  +  I I      +                  N    + + 
Sbjct: 137 RLRYLSGIKEKQVVGEIEIIRPFLHFQKKDFLSIFHFEDTSNKENHYFRNRIR 189


>gi|291287571|ref|YP_003504387.1| PP-loop domain protein [Denitrovibrio acetiphilus DSM 12809]
 gi|290884731|gb|ADD68431.1| PP-loop domain protein [Denitrovibrio acetiphilus DSM 12809]
          Length = 298

 Score = 42.6 bits (98), Expect = 0.053,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 24/82 (29%), Gaps = 8/82 (9%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
             +   +   ++  SGG+DS                +  + G       E      +K+ 
Sbjct: 41  YKMFDFSDKIMVCISGGKDSLVLWYLLHKMGYETTGMYINLGI-----GEYSEKSLRKVE 95

Query: 62  ELMPKWKDSLGEDHILPLAILG 83
               K+        I+ L  LG
Sbjct: 96  AFTEKFGLKAV---IVNLTELG 114


>gi|219723252|ref|YP_002476692.1| GMP synthase [Borrelia burgdorferi 156a]
 gi|219693051|gb|ACL34258.1| GMP synthase [Borrelia burgdorferi 156a]
          Length = 511

 Score = 42.6 bits (98), Expect = 0.053,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 53/187 (28%), Gaps = 19/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DS  C         + +  +  + G   K E        KKI+EL  +
Sbjct: 215 NKKVILGLSGGTDSLVCALLIKKAINENLICVFVNTGLLRKNED-------KKILELKHQ 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  ++   +     +    + S   +   +  ++       +   +      A    Y  
Sbjct: 268 YDLNIKYINASTKFLNRLKNISDPEEKRKIIGKEFVDVFEKITLEDQNIEYLAQGTIYSD 327

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            I +       +    + +      +     +    E             K E  ++  +
Sbjct: 328 VIESKSKDSSSSKIKSHHNVGGLPDKMSLKLLEPLNEFF-----------KDEIIQIGIN 376

Query: 187 IGGQDLV 193
           +G +   
Sbjct: 377 LGIKKES 383


>gi|254169064|ref|ZP_04875902.1| conserved domain protein, putative [Aciduliprofundum boonei T469]
 gi|197622034|gb|EDY34611.1| conserved domain protein, putative [Aciduliprofundum boonei T469]
          Length = 221

 Score = 42.6 bits (98), Expect = 0.053,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 24/49 (48%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           A+ LFSGG+DS+  +  A+ +   +E L   Y +R    +     + +
Sbjct: 2  RAIALFSGGKDSTYSIYLAMQQGFEIEKLVTIYPKREDSYMYHIPAIER 50


>gi|163788006|ref|ZP_02182452.1| GMP synthetase (glutamine-hydrolyzing) [Flavobacteriales bacterium
           ALC-1]
 gi|159876326|gb|EDP70384.1| GMP synthetase (glutamine-hydrolyzing) [Flavobacteriales bacterium
           ALC-1]
          Length = 511

 Score = 42.6 bits (98), Expect = 0.053,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 12/37 (32%), Gaps = 1/37 (2%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
               +L  SGG DSS             +  +  + G
Sbjct: 214 NDKVVLGLSGGVDSSVAAMLLHKAIGKNLYCIFVNNG 250


>gi|308185759|ref|YP_003929890.1| cell cycle protein [Pantoea vagans C9-1]
 gi|308056269|gb|ADO08441.1| cell cycle protein [Pantoea vagans C9-1]
          Length = 466

 Score = 42.6 bits (98), Expect = 0.053,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 18/50 (36%), Gaps = 5/50 (10%)

Query: 12 LLLFSGGQDSSTCLSWAL---DRFDRVE--TLSFDYGQRNKVELECRLCV 56
          ++ FSGG DS+  L   L    +  +     L   +G     +     C 
Sbjct: 45 VVAFSGGLDSTVLLHQLLGWQQQHPQSHLRALHVHHGLSPNADAWAAHCQ 94


>gi|302671171|ref|YP_003831131.1| argininosuccinate synthase ArgG [Butyrivibrio proteoclasticus B316]
 gi|302395644|gb|ADL34549.1| argininosuccinate synthase ArgG [Butyrivibrio proteoclasticus B316]
          Length = 407

 Score = 42.6 bits (98), Expect = 0.053,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 57/211 (27%), Gaps = 24/211 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L +SGG D++  + W  + F   V     D GQ  +++      +          
Sbjct: 3   KEKVILAYSGGLDTTAIIPWLKENFDYEVICCCIDCGQEEELDGLEERAI---------- 52

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              S G   +  L ++ +     +   V       N           +       +A + 
Sbjct: 53  ---SCGASKLYILDVVDEFCDEYIVPCVQAHAVYENKYLLGTSMARPLIAKKLVEVARKE 109

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   I  G                  A +  I     +        M  ++ E      +
Sbjct: 110 GAVAICHGATGKGNDQIRFELGIKALAPDIKIIAAWRNDKW----TMDSRESEI-----E 160

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
                 +NL    + + Y   R+  +    G
Sbjct: 161 YCKAHGINLPFS-ADSSYSRDRNLWHISHEG 190


>gi|291001787|ref|XP_002683460.1| predicted protein [Naegleria gruberi]
 gi|284097089|gb|EFC50716.1| predicted protein [Naegleria gruberi]
          Length = 886

 Score = 42.6 bits (98), Expect = 0.053,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 58/192 (30%), Gaps = 16/192 (8%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D+IK+    LL  SGG+DS T L            ++F++G                   
Sbjct: 606 DMIKEGDRLLLGLSGGKDSLTLLHVLHALQYSNLGINFEFG----------------ACT 649

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           + P+         I     LG          +    + +         R    +++    
Sbjct: 650 VDPQTASYDPSPLINYCKQLGVPYFYESQSVIEGAKECDASSICAWCARMKRGILYNTAR 709

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
                +  +   + +   S      H+       A        + V  PL+++++ ET K
Sbjct: 710 REGYNVLVLGQHLDDLAESFIMSIFHNGFMRTMKAHYTIDVGDLRVIRPLIYVRETETKK 769

Query: 183 LAQDIGGQDLVN 194
            A + G   +  
Sbjct: 770 FAWESGLPVINE 781


>gi|262381387|ref|ZP_06074525.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262296564|gb|EEY84494.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 438

 Score = 42.6 bits (98), Expect = 0.053,   Method: Composition-based stats.
 Identities = 22/193 (11%), Positives = 55/193 (28%), Gaps = 23/193 (11%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
             ++ +    L+  SGG DS   L   +        L  ++  R +          +   
Sbjct: 12  YRLLSEDRPVLVGLSGGADSVALLGVLVRLGYPCIALHCNFHLRGEESDRDEAFACEFAE 71

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
            L           H +    +      +  K++++++    L   +           A  
Sbjct: 72  SLE-------VPFHKIDFDTIS----YAGEKHLSIEMAARELRYAWFEEMRERLGGQATA 120

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           +A+    +   + +     +G         R            +  +  PL+ + + +  
Sbjct: 121 VAHHRDDSVETVLMNLIRGTGIRGMSGIRPR------------NGFIVRPLLCVSREDIL 168

Query: 182 KLAQDIGGQDLVN 194
               D G   +V+
Sbjct: 169 AWLADQGYAYMVD 181


>gi|258508963|ref|YP_003171714.1| GMP synthase [Lactobacillus rhamnosus GG]
 gi|257148890|emb|CAR87863.1| GMP synthase [Lactobacillus rhamnosus GG]
 gi|259650257|dbj|BAI42419.1| GMP synthase/glutamine amidotransferase [Lactobacillus rhamnosus
           GG]
          Length = 517

 Score = 42.6 bits (98), Expect = 0.053,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 56/186 (30%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS            ++ ++  D+G   K E      V   +       
Sbjct: 223 KRVLLGLSGGVDSSVVGVLLHKAIGTQLTSIFVDHGLLRKGE---AEQVMDSLKGKFGLN 279

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       L  L  ++     + +               GR+ I +      A   G
Sbjct: 280 IIKVNAKDRF-LNDLKGVTDPEKKRKI--------------IGRDFIEVFNEEA-AKLNG 323

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G   TD          TI++      L  +    +  PL  L K E  +L + +
Sbjct: 324 IEFLAQGTLYTDVVESGTDTAQTIKSHHNVGGLPEDLKFKLIEPLNKLFKDEVRELGEKL 383

Query: 188 GGQDLV 193
           G    +
Sbjct: 384 GMPHSL 389


>gi|229553236|ref|ZP_04441961.1| GMP synthase [Lactobacillus rhamnosus LMS2-1]
 gi|258540150|ref|YP_003174649.1| GMP synthase [Lactobacillus rhamnosus Lc 705]
 gi|229313322|gb|EEN79295.1| GMP synthase [Lactobacillus rhamnosus LMS2-1]
 gi|257151826|emb|CAR90798.1| GMP synthase [Lactobacillus rhamnosus Lc 705]
          Length = 517

 Score = 42.6 bits (98), Expect = 0.053,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 56/186 (30%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS            ++ ++  D+G   K E      V   +       
Sbjct: 223 KRVLLGLSGGVDSSVVGVLLHKAIGTQLTSIFVDHGLLRKGE---AEQVMDSLKGKFGLN 279

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       L  L  ++     + +               GR+ I +      A   G
Sbjct: 280 IIKVNAKDRF-LNDLKGVTDPEKKRKI--------------IGRDFIEVFNEEA-AKLNG 323

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G   TD          TI++      L  +    +  PL  L K E  +L + +
Sbjct: 324 IEFLAQGTLYTDVVESGTDTAQTIKSHHNVGGLPEDLKFKLIEPLNKLFKDEVRELGEKL 383

Query: 188 GGQDLV 193
           G    +
Sbjct: 384 GMPHSL 389


>gi|227540926|ref|ZP_03970975.1| tRNA(Ile)-lysidine synthetase [Corynebacterium glucuronolyticum
           ATCC 51866]
 gi|227183186|gb|EEI64158.1| tRNA(Ile)-lysidine synthetase [Corynebacterium glucuronolyticum
           ATCC 51866]
          Length = 270

 Score = 42.6 bits (98), Expect = 0.053,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 32/119 (26%), Gaps = 2/119 (1%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYG-QRNKVE-LECRLCVRKKIVELMPKWKDSLG 72
            SGG DS    +  +     V  L  D+G Q    E  E    + +           ++ 
Sbjct: 5   LSGGPDSLALTAALVAEGVHVTALCIDHGLQDGSREVSEEAARIARSWGAEARVIPINVD 64

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
                        + +     V +    ++L  TF+              A   G   I
Sbjct: 65  PPTESAARQARYRAFAEWGGPVCVAHTMDDLAETFLIAGLRGMTCGMRETAEVEGAHII 123


>gi|199599149|ref|ZP_03212553.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Lactobacillus rhamnosus HN001]
 gi|199589972|gb|EDY98074.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Lactobacillus rhamnosus HN001]
          Length = 517

 Score = 42.6 bits (98), Expect = 0.053,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 56/186 (30%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS            ++ ++  D+G   K E      V   +       
Sbjct: 223 KRVLLGLSGGVDSSVVGVLLHKAIGTQLTSIFVDHGLLRKGE---AEQVMDSLKGKFGLN 279

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       L  L  ++     + +               GR+ I +      A   G
Sbjct: 280 IIKVNAKDRF-LNDLKGVTDPEKKRKI--------------IGRDFIEVFNEEA-AKLNG 323

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G   TD          TI++      L  +    +  PL  L K E  +L + +
Sbjct: 324 IEFLAQGTLYTDVVESGTDTAQTIKSHHNVGGLPEDLKFKLIEPLNKLFKDEVRELGEKL 383

Query: 188 GGQDLV 193
           G    +
Sbjct: 384 GMPHSL 389


>gi|221135468|ref|ZP_03561771.1| asparagine synthetase B [Glaciecola sp. HTCC2999]
          Length = 387

 Score = 42.6 bits (98), Expect = 0.053,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 62/207 (29%), Gaps = 15/207 (7%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWAL-------DRFDRVET----LS-FDYGQRNKVE 49
           + ++   P A+ L SGG DSS   + A        +  D+ +     L  F  G     +
Sbjct: 52  SHLMSDVPYAV-LLSGGLDSSLVSAVAAQYVAKRVEDGDQSDAWWPRLHSFAVGLEGAPD 110

Query: 50  LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
           L+    V   I  +  +      ++ +  +  +     +  T  +        +      
Sbjct: 111 LKAAQKVADMIGTVHHEI-HFTIQEGLDAIRDVIYFLETYDTTTIRAATPMYLMTRKIKA 169

Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
               + L          G           ++      + + +   + A      S   V 
Sbjct: 170 MGIKMVLSGEGADEIFGGYLYFHKAPNAKEFHEETVRKLERLHMFDCARANKSTSAWGVE 229

Query: 170 TPLMWLKKYETWKLAQDIGGQDLVNLI 196
             + +L K E   +A  +  QD + L 
Sbjct: 230 ARVPFLDK-EFIDVAMRLNPQDKMCLD 255


>gi|83721476|ref|YP_442497.1| sulfate adenylyltransferase subunit 2 [Burkholderia thailandensis
           E264]
 gi|257138704|ref|ZP_05586966.1| sulfate adenylyltransferase subunit 2 [Burkholderia thailandensis
           E264]
 gi|83655301|gb|ABC39364.1| sulfate adenylyltransferase, subunit 2 [Burkholderia thailandensis
           E264]
          Length = 321

 Score = 42.6 bits (98), Expect = 0.053,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 51/195 (26%), Gaps = 19/195 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF---------DRVETLSFDYGQRNKVELE 51
           + +++ +     LLFSGG+DS   L  AL  F              +  D G      ++
Sbjct: 35  LRELVAECSKPALLFSGGKDSVVVLHLALKAFGLGANRKTTLPFPLVHIDTGHNYDEVID 94

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
            R    K+I          L   H+      G +     T +         L      G 
Sbjct: 95  FRDRRAKEIGA-------QLVVGHVEDSIARGTVVLRRETDSRNAAQAVTLLETIERHGY 147

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
             +                I     E         R +        ++ G    V    P
Sbjct: 148 TAMIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHRGEHLRV---FP 204

Query: 172 LMWLKKYETWKLAQD 186
           +    + + W+    
Sbjct: 205 ISNWTELDVWQYIAR 219


>gi|83719675|ref|YP_441373.1| sulfate adenylyltransferase subunit 2 [Burkholderia thailandensis
           E264]
 gi|257139954|ref|ZP_05588216.1| sulfate adenylyltransferase subunit 2 [Burkholderia thailandensis
           E264]
 gi|83653500|gb|ABC37563.1| sulfate adenylyltransferase, subunit 2 [Burkholderia thailandensis
           E264]
          Length = 321

 Score = 42.6 bits (98), Expect = 0.053,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 51/195 (26%), Gaps = 19/195 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF---------DRVETLSFDYGQRNKVELE 51
           + +++ +     LLFSGG+DS   L  AL  F              +  D G      ++
Sbjct: 35  LRELVAECSKPALLFSGGKDSVVVLHLALKAFGLGANRKTTLPFPLVHIDTGHNYDEVID 94

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
            R    K+I          L   H+      G +     T +         L      G 
Sbjct: 95  FRDRRAKEIGA-------QLVVGHVEDSIARGTVVLRRETDSRNAAQAVTLLETIERHGY 147

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
             +                I     E         R +        ++ G    V    P
Sbjct: 148 TAMIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHRGEHLRV---FP 204

Query: 172 LMWLKKYETWKLAQD 186
           +    + + W+    
Sbjct: 205 ISNWTELDVWQYIAR 219


>gi|332521164|ref|ZP_08397622.1| GMP synthase, large subunit [Lacinutrix algicola 5H-3-7-4]
 gi|332043257|gb|EGI79454.1| GMP synthase, large subunit [Lacinutrix algicola 5H-3-7-4]
          Length = 517

 Score = 42.2 bits (97), Expect = 0.053,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 13/37 (35%), Gaps = 1/37 (2%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
               +L  SGG DSS           + +  +  + G
Sbjct: 220 NDKVVLGLSGGVDSSVAAMLLHKAIGENLYCIFVNNG 256


>gi|313835919|gb|EFS73633.1| GMP synthase protein [Propionibacterium acnes HL037PA2]
 gi|314927235|gb|EFS91066.1| GMP synthase protein [Propionibacterium acnes HL044PA1]
 gi|314970629|gb|EFT14727.1| GMP synthase protein [Propionibacterium acnes HL037PA3]
 gi|328906134|gb|EGG25909.1| GMP synthase, large subunit [Propionibacterium sp. P08]
          Length = 517

 Score = 42.2 bits (97), Expect = 0.053,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 52/183 (28%), Gaps = 16/183 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +       D++  +  D+G   K E      V+   V       
Sbjct: 219 RVICGLSGGVDSAVAAALVQRAVGDQLTCVFVDHGLLRKGE---AEQVKDDFVAATGADL 275

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E     L +L  I  S       +  ++       V  R           A +   
Sbjct: 276 VVADESQRF-LDVLTGI--SDPEAKRKIIGREFIRTFEDVAKRLN---------ADQPID 323

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +   ++  PL  L K E   +  ++G
Sbjct: 324 FLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPDDLQFSLVEPLRTLFKDEVRAVGLELG 383

Query: 189 GQD 191
             +
Sbjct: 384 LPN 386


>gi|331671694|ref|ZP_08372492.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
          (tRNA(Ile)-2-lysyl-cytidine synthase) [Escherichia coli
          TA280]
 gi|331071539|gb|EGI42896.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
          (tRNA(Ile)-2-lysyl-cytidine synthase) [Escherichia coli
          TA280]
          Length = 432

 Score = 42.2 bits (97), Expect = 0.053,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 5/60 (8%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYGQRNKVELECRLC 55
          +N  +  +   L+ FSGG DS+  L   +          +  +   +G     +   R C
Sbjct: 5  LNRQLLSSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHGLSANADAWVRHC 64


>gi|304406346|ref|ZP_07388003.1| GMP synthase, large subunit [Paenibacillus curdlanolyticus YK9]
 gi|304344930|gb|EFM10767.1| GMP synthase, large subunit [Paenibacillus curdlanolyticus YK9]
          Length = 512

 Score = 42.2 bits (97), Expect = 0.053,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 52/186 (27%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            + L   SGG DSS           D++  +  D+G   K E      V +  V      
Sbjct: 218 KNVLCALSGGVDSSVVAMLIHKAIGDQLTCMFIDHGMLRKGE---AESVMETFVGKFDMK 274

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +          LG +   S  +     I +  +                   A    
Sbjct: 275 VIKIDASER----FLGKLKGVSDPEQKRKIIGNEFIYVF------------DEESAKLGD 318

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +  G   TD          TI++      L  +    +  PL  L K E  K+  + 
Sbjct: 319 FAFLAQGTLYTDIVESGTATAQTIKSHHNVGGLPEDMKFELVEPLKALFKDEVRKVGSEC 378

Query: 188 GGQDLV 193
           G  D +
Sbjct: 379 GLPDAI 384


>gi|298244357|ref|ZP_06968163.1| asparagine synthase [Ktedonobacter racemifer DSM 44963]
 gi|297551838|gb|EFH85703.1| asparagine synthase [Ktedonobacter racemifer DSM 44963]
          Length = 596

 Score = 42.2 bits (97), Expect = 0.053,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 23/64 (35%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +L SGG DS+   +   +    V     ++   +  E      V   +   +     S G
Sbjct: 243 VLLSGGIDSAALAAALAELGTDVVAYHIEFEHPSASEAYFAQAVCDALQIPLHTVVGSTG 302

Query: 73  EDHI 76
            D++
Sbjct: 303 ADYL 306


>gi|303288041|ref|XP_003063309.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226455141|gb|EEH52445.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 405

 Score = 42.2 bits (97), Expect = 0.053,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 40/120 (33%), Gaps = 9/120 (7%)

Query: 11  ALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELM-PKWK 68
            +L +SGG D+S  L W  D     V T + D GQ  ++E       +  + E+     +
Sbjct: 4   VVLAYSGGLDTSIILKWLQDTYGCEVVTFTADLGQGEELEPARAKAEQMGVKEIYIDDLR 63

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +    D++ P+     +         ++           +  R I         A   G 
Sbjct: 64  EEFVRDYVFPMFRANAVYEGEYLLGTSIARP-------LIAKRQIEIAREVGADAVCHGA 116


>gi|218698608|ref|YP_002406237.1| tRNA(Ile)-lysidine synthetase [Escherichia coli IAI39]
 gi|218368594|emb|CAR16331.1| tRNA(Ile)-lysidine synthetase [Escherichia coli IAI39]
          Length = 432

 Score = 42.2 bits (97), Expect = 0.053,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 5/60 (8%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYGQRNKVELECRLC 55
          +N  +  +   L+ FSGG DS+  L   +          +  +   +G     +   R C
Sbjct: 5  LNRQLLSSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHGLSANADAWVRHC 64


>gi|170682716|ref|YP_001742316.1| tRNA(Ile)-lysidine synthetase [Escherichia coli SMS-3-5]
 gi|170520434|gb|ACB18612.1| tRNA(Ile)-lysidine synthase [Escherichia coli SMS-3-5]
          Length = 432

 Score = 42.2 bits (97), Expect = 0.053,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 5/60 (8%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYGQRNKVELECRLC 55
          +N  +  +   L+ FSGG DS+  L   +          +  +   +G     +   R C
Sbjct: 5  LNRQLLSSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHGLSANADAWVRHC 64


>gi|163755924|ref|ZP_02163041.1| GMP synthetase (glutamine-hydrolyzing) [Kordia algicida OT-1]
 gi|161324095|gb|EDP95427.1| GMP synthetase (glutamine-hydrolyzing) [Kordia algicida OT-1]
          Length = 511

 Score = 42.2 bits (97), Expect = 0.053,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 13/37 (35%), Gaps = 1/37 (2%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
               +L  SGG DSS           + +  +  + G
Sbjct: 214 NDKVVLGLSGGVDSSVAAMLLHKAIGENLYCIFVNNG 250


>gi|114320176|ref|YP_741859.1| GMP synthase [Alkalilimnicola ehrlichii MLHE-1]
 gi|122312013|sp|Q0A9W8|GUAA_ALHEH RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|114226570|gb|ABI56369.1| GMP synthase (glutamine-hydrolyzing) [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 525

 Score = 42.2 bits (97), Expect = 0.053,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 51/184 (27%), Gaps = 19/184 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPK 66
              LL  SGG DSS   +       D++  +  D G  R     +      + +   + +
Sbjct: 228 DKVLLGLSGGVDSSVVAALLHRAIGDQLTCVFVDNGLLRKDEGDQVMATFARHMGVNVIR 287

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                       L  L  +      + +   +              + +L          
Sbjct: 288 VDAEAR-----FLEALKGVDDPERKRKIIGNMFIEVFDEQAARLTEVDWLAQGTIY---- 338

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                       + +G    +   I++      L  +  + +  PL  L K E  ++  +
Sbjct: 339 --------PDVIESAGSATGKAHVIKSHHNVGGLPEDMTLKLVEPLRELFKDEVRRIGLE 390

Query: 187 IGGQ 190
           +G  
Sbjct: 391 LGLP 394


>gi|111224575|ref|YP_715369.1| argininosuccinate synthase [Frankia alni ACN14a]
 gi|123044092|sp|Q0RFB2|ASSY_FRAAA RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|111152107|emb|CAJ63835.1| Argininosuccinate synthase (Citrulline--aspartate ligase)
          [Frankia alni ACN14a]
          Length = 400

 Score = 42.2 bits (97), Expect = 0.053,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 17/51 (33%), Gaps = 1/51 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
               +L +SGG D S        +    V  L+ D GQ  +     R   
Sbjct: 1  MTERVVLAYSGGLDTSVAIGWIGAETGAEVVALAVDVGQGGEDLEAIRQRA 51


>gi|39973869|ref|XP_368325.1| hypothetical protein MGG_00919 [Magnaporthe oryzae 70-15]
 gi|145018133|gb|EDK02412.1| hypothetical protein MGG_00919 [Magnaporthe oryzae 70-15]
          Length = 543

 Score = 42.2 bits (97), Expect = 0.053,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 60/198 (30%), Gaps = 26/198 (13%)

Query: 9   PSALLL--FSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELM 64
             A ++   SGG DS+       +   DR   +  D G  R+            +  E+ 
Sbjct: 231 DKAQVIGAVSGGVDSTVAAKLMKEAIGDRFHAVLVDQGVMRH-----------NECAEVK 279

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +D LG +  +  A   +   S L      + +   + NTF+       +        
Sbjct: 280 KALQDHLGINLTV--ADASERFLSGLKGVEDPEQKRKFIGNTFIDIFEEEAIKIEKAAEN 337

Query: 125 RLGITNIVIGVCETDY-----SGYPDCRHDTIRAIETAINLGMESH----VTVHTPLMWL 175
                 +   +  T Y     S        TI+       L         + +  PL  L
Sbjct: 338 TPNAGKVEWFLQGTLYPDVIESISFKGPSATIKTHHNVGGLPKRMMEGQGLRLIEPLREL 397

Query: 176 KKYETWKLAQDIGGQDLV 193
            K E   + +++   + +
Sbjct: 398 FKDEVRAMGRELKINEEL 415


>gi|331087802|ref|ZP_08336728.1| argininosuccinate synthase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|330409783|gb|EGG89219.1| argininosuccinate synthase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 406

 Score = 42.2 bits (97), Expect = 0.054,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 60/211 (28%), Gaps = 23/211 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L +SGG D++  + W  + F   V     D GQ  +++         K+      
Sbjct: 3   KEKVILAYSGGLDTTAIIPWLKENFDYDVVCCCIDCGQGEELDGLEERA---KLSGASKL 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           + +++ ++      +       +        +   ++    +  R +         A   
Sbjct: 60  YIENIIDEFCDDYVM---PCVKAGAVYENKYLLGTSMARPVIAKRLVEIARKEGATAICH 116

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G T         +           I A     ++                + E  +  + 
Sbjct: 117 GATGKGNDQIRFELGIKALAPDLKIIAPWRMTDV-----------WTMQSREEEIEYCKQ 165

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
            G    +NL  +  H+ Y   R+  +    G
Sbjct: 166 HG----INLPFDAKHS-YSRDRNLWHISHEG 191


>gi|325067603|ref|ZP_08126276.1| asparagine synthase (glutamine-hydrolyzing) [Actinomyces oris K20]
          Length = 555

 Score = 42.2 bits (97), Expect = 0.054,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 23/62 (37%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
            P  ++  SGG DS   ++W          ++F YG+    E+E    V + +       
Sbjct: 182 TPRLVVPLSGGLDSRLLVAWLTLHDALDRAVAFTYGRPGAREVEISRKVAQAVGLEWHAV 241

Query: 68  KD 69
             
Sbjct: 242 DY 243


>gi|314964923|gb|EFT09022.1| GMP synthase protein [Propionibacterium acnes HL082PA2]
          Length = 517

 Score = 42.2 bits (97), Expect = 0.054,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 51/183 (27%), Gaps = 16/183 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +       D++  +  D+G   + E      V+   V       
Sbjct: 219 RVICGLSGGVDSAVAAALVQRAVGDQLTCVFVDHGLLRQGE---AEQVKNDFVAATGADL 275

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E      A+ G    +       +  ++       V  R           A +   
Sbjct: 276 VVADESQRFLDALAG---VTDPETKRKIIGREFIRTFEDVAKRLN---------ADQPID 323

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +   ++  PL  L K E   +  ++G
Sbjct: 324 FLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPDDLQFSLVEPLRTLFKDEARAVGLELG 383

Query: 189 GQD 191
             +
Sbjct: 384 LPE 386


>gi|313793359|gb|EFS41417.1| GMP synthase protein [Propionibacterium acnes HL110PA1]
 gi|313800999|gb|EFS42267.1| GMP synthase protein [Propionibacterium acnes HL110PA2]
 gi|313838049|gb|EFS75763.1| GMP synthase protein [Propionibacterium acnes HL086PA1]
 gi|314963442|gb|EFT07542.1| GMP synthase protein [Propionibacterium acnes HL082PA1]
 gi|315077290|gb|EFT49352.1| GMP synthase protein [Propionibacterium acnes HL053PA2]
 gi|327451714|gb|EGE98368.1| GMP synthase protein [Propionibacterium acnes HL092PA1]
          Length = 517

 Score = 42.2 bits (97), Expect = 0.054,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 51/183 (27%), Gaps = 16/183 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +       D++  +  D+G   + E      V+   V       
Sbjct: 219 RVICGLSGGVDSAVAAALVQRAVGDQLTCVFVDHGLLRQGE---AEQVKNDFVAATGADL 275

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E      A+ G    +       +  ++       V  R           A +   
Sbjct: 276 VVADESQRFLDALAG---VTDPETKRKIIGREFIRTFEDVAKRLN---------ADQPID 323

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +   ++  PL  L K E   +  ++G
Sbjct: 324 FLVQGTLYPDVVESGGGEGAANIKSHHNVGGLPDDLQFSLVEPLRTLFKDEARAVGLELG 383

Query: 189 GQD 191
             +
Sbjct: 384 LPE 386


>gi|309807240|ref|ZP_07701212.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus iners LactinV 03V1-b]
 gi|308166378|gb|EFO68585.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Lactobacillus iners LactinV 03V1-b]
          Length = 375

 Score = 42.2 bits (97), Expect = 0.054,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 48/186 (25%), Gaps = 13/186 (6%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKWK 68
             ++  SGG DSS       ++   V  +   ++   +   +       + +  +  K  
Sbjct: 8   RVVVGMSGGVDSSVSALLLKEQRYDVVGVFMKNWDDTDDSGVCTATEDFEDVKRVADKIG 67

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                              + + +    + +    PN  +     I        A +L  
Sbjct: 68  IPYYS------INFEKEYWNKVFEYFLSEYKRGRTPNPDIMCNKEIKFKSFLDFAMKLDA 121

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV------TVHTPLMWLKKYETWK 182
             I +G      +      H               S V          PL  L K +   
Sbjct: 122 DYIAMGHYAKTVTDENGIVHMMRPKDGNKDQTYFLSQVTQEQLKKAIFPLADLSKPQVRM 181

Query: 183 LAQDIG 188
           +A+  G
Sbjct: 182 IAEQAG 187


>gi|313124829|ref|YP_004035093.1| hypothetical protein Hbor_00410 [Halogeometricum borinquense DSM
           11551]
 gi|312291194|gb|ADQ65654.1| conserved hypothetical protein TIGR00268 [Halogeometricum
           borinquense DSM 11551]
          Length = 302

 Score = 42.2 bits (97), Expect = 0.054,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 31/116 (26%), Gaps = 11/116 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            L+ FSGG DSS   + A D   D     +         EL+    V  +I         
Sbjct: 31  VLIAFSGGVDSSVVAALAHDALGDDAIACTAKSETLPTEELDDARRVADEIG-------- 82

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 I+  + L +    +   +     +   L   +   R              
Sbjct: 83  --IRHEIVEFSELDNPDFVANDGDRCYHCRTMRLGRMYDAARERGIETVCDGTNAS 136


>gi|254518000|ref|ZP_05130056.1| argininosuccinate synthase [Clostridium sp. 7_2_43FAA]
 gi|226911749|gb|EEH96950.1| argininosuccinate synthase [Clostridium sp. 7_2_43FAA]
          Length = 407

 Score = 42.2 bits (97), Expect = 0.054,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQR 45
          +KK    +L +SGG D+S  +SW  + +   V  +  + GQ+
Sbjct: 1  MKKFNKVVLAYSGGLDTSIIISWLKETYNCEVIAVVGNVGQK 42


>gi|219851846|ref|YP_002466278.1| PP-loop domain protein [Methanosphaerula palustris E1-9c]
 gi|219546105|gb|ACL16555.1| PP-loop domain protein [Methanosphaerula palustris E1-9c]
          Length = 304

 Score = 42.2 bits (97), Expect = 0.054,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 25/76 (32%), Gaps = 14/76 (18%)

Query: 8   APSALLLFSGGQDSSTCLSWA-----LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
                +  SGG+DS+  L            DR+  ++ D G R+  +             
Sbjct: 47  NERIAVALSGGKDSTVLLWLMNMLLGKRAADRLVAITVDEGIRDYRDETLA--------- 97

Query: 63  LMPKWKDSLGEDHILP 78
              +    LG  HI+ 
Sbjct: 98  AARRLTHRLGIRHIIV 113


>gi|154505539|ref|ZP_02042277.1| hypothetical protein RUMGNA_03076 [Ruminococcus gnavus ATCC
          29149]
 gi|153794197|gb|EDN76617.1| hypothetical protein RUMGNA_03076 [Ruminococcus gnavus ATCC
          29149]
          Length = 469

 Score = 42.2 bits (97), Expect = 0.054,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 18/46 (39%), Gaps = 4/46 (8%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWAL----DRFDRVETLSFDYGQR 45
          +++K    +   SGG DS   L   L         V  +  ++G R
Sbjct: 14 MLQKEDKVIAGISGGADSICLLFVLLRLQEKIGFDVIAVHVNHGLR 59


>gi|254225768|ref|ZP_04919373.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae V51]
 gi|125621674|gb|EAZ50003.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae V51]
          Length = 440

 Score = 42.2 bits (97), Expect = 0.054,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 17/52 (32%), Gaps = 4/52 (7%)

Query: 10 SALLLFSGGQDSSTCLSWALDR----FDRVETLSFDYGQRNKVELECRLCVR 57
            LL  SGG DS   L+            V  +   +G     +   + C R
Sbjct: 19 KILLALSGGVDSRVLLALLARGRDEFGWDVAAVHVHHGLSPNADQWAQHCQR 70


>gi|315125894|ref|YP_004067897.1| argininosuccinate synthase [Pseudoalteromonas sp. SM9913]
 gi|315014408|gb|ADT67746.1| argininosuccinate synthase [Pseudoalteromonas sp. SM9913]
          Length = 400

 Score = 42.2 bits (97), Expect = 0.054,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 16/54 (29%), Gaps = 1/54 (1%)

Query: 5  IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          +      +L +SGG D S+       +    V     D GQ  +          
Sbjct: 1  MSSIKKVVLAYSGGLDTSAIVPWLKENYGCEVIAFVADVGQGAEELEGVEAKAI 54


>gi|294055884|ref|YP_003549542.1| GMP synthase, large subunit [Coraliomargarita akajimensis DSM
           45221]
 gi|293615217|gb|ADE55372.1| GMP synthase, large subunit [Coraliomargarita akajimensis DSM
           45221]
          Length = 515

 Score = 42.2 bits (97), Expect = 0.054,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 53/184 (28%), Gaps = 15/184 (8%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +        ++  +  D G     E        +K+         
Sbjct: 217 VILGLSGGVDSSVAAALIHKAIGRQLTCVFVDNGLLRLHE----REQVEKLYGDHFDLDV 272

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            + +   L L  L D+S     + +                ++     F A         
Sbjct: 273 RVADKRKLFLDRLADVSDPEQKRKIIGNTFVEVFDEAVNELKSSGNYTFLA--------- 323

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
              +     +           I++      L  + ++ +  PL  L K E  +L   +G 
Sbjct: 324 QGTLYPDVIESVAIDGNPAALIKSHHNVGGLPEKMNLKLLEPLRELFKDEVRELGTQLGL 383

Query: 190 QDLV 193
              V
Sbjct: 384 PKEV 387


>gi|253572641|ref|ZP_04850042.1| tRNA(Ile)-lysidine synthase [Bacteroides sp. 1_1_6]
 gi|251837773|gb|EES65863.1| tRNA(Ile)-lysidine synthase [Bacteroides sp. 1_1_6]
          Length = 426

 Score = 42.2 bits (97), Expect = 0.054,   Method: Composition-based stats.
 Identities = 10/70 (14%), Positives = 22/70 (31%), Gaps = 3/70 (4%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR---NKVELECRLCVRKKI 60
          +       L+  SGG DS   L        + E    ++  R   +  + +    + +K 
Sbjct: 15 LFSPDDKLLVALSGGADSVALLRVLHTAGYQCEAAHCNFHLRGEESNRDEQFVRQLCQKY 74

Query: 61 VELMPKWKDS 70
             +     +
Sbjct: 75 GIRLHTIDFN 84


>gi|110806438|ref|YP_689958.1| GMP synthase [Shigella flexneri 5 str. 8401]
 gi|123048017|sp|Q0T212|GUAA_SHIF8 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|110615986|gb|ABF04653.1| GMP synthetase (glutamine-hydrolyzing) [Shigella flexneri 5 str.
           8401]
          Length = 525

 Score = 42.2 bits (97), Expect = 0.054,   Method: Composition-based stats.
 Identities = 24/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAEQVLDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  ++  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVREIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|27262508|gb|AAN87535.1| cell cycle protein MesJ [Heliobacillus mobilis]
          Length = 308

 Score = 42.2 bits (97), Expect = 0.054,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 6/60 (10%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYGQRNKVELECRLCVRK 58
          I K     ++  SGG DS  CL     +        +    +++G R K   E    V +
Sbjct: 17 INKPRERIVIALSGGADS-VCLLLLFKKVSPQFGIELAAAHYNHGMRGKESDEDAAFVAE 75


>gi|74204367|dbj|BAE39937.1| unnamed protein product [Mus musculus]
          Length = 561

 Score = 42.2 bits (97), Expect = 0.054,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 4/62 (6%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRV---ETL-SFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            L SGG DSS   ++ L +         L +F  G  +  +L     V   I     +  
Sbjct: 255 CLLSGGLDSSLVAAYLLKQLKEAQVQYPLQTFAIGMEDSPDLLAARKVANYIGSEHHEVL 314

Query: 69  DS 70
            +
Sbjct: 315 FN 316


>gi|61216758|sp|Q9ZGE2|TILS_HELMO RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
          Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
          Full=tRNA(Ile)-lysidine synthetase
 gi|3820563|gb|AAC84036.1| cell cycle protein MesJ [Heliobacillus mobilis]
          Length = 470

 Score = 42.2 bits (97), Expect = 0.054,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 6/60 (10%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYGQRNKVELECRLCVRK 58
          I K     ++  SGG DS  CL     +        +    +++G R K   E    V +
Sbjct: 17 INKPRERIVIALSGGADS-VCLLLLFKKVSPQFGIELAAAHYNHGMRGKESDEDAAFVAE 75


>gi|316971965|gb|EFV55675.1| GMP synthase [Trichinella spiralis]
          Length = 465

 Score = 42.2 bits (97), Expect = 0.055,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 63/199 (31%), Gaps = 17/199 (8%)

Query: 13  LLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKI---------- 60
           +L SGG DS+ C           +V  +  D G   K E    + + K +          
Sbjct: 6   ILCSGGVDSTVCAVLLRKALGKSKVIPVFIDNGFLRKNEATEVVEMLKSLDFDVKCSYCL 65

Query: 61  ---VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
              V    K ++ +     +   +LG    + L +    +++   + +TF+     I   
Sbjct: 66  YSCVCPFNKSREFIHSTLPIHDKLLGAFEDAMLCRTCNPEMKRRIIGDTFMRMIKYIARQ 125

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA--INLGMESHVTVHTPLMWL 175
               +         +        S       DTI+       +   + +   +  PL   
Sbjct: 126 LKLNMKEVYLAQGTLRPDLIESASQLVSSHADTIKTHHNDTSLVRALRACGRIIEPLKDF 185

Query: 176 KKYETWKLAQDIGGQDLVN 194
            K E   LA+D+   D V 
Sbjct: 186 HKDEVRALARDLNLPDYVI 204


>gi|289596618|ref|YP_003483314.1| phosphoadenosine phosphosulfate reductase [Aciduliprofundum boonei
           T469]
 gi|289534405|gb|ADD08752.1| phosphoadenosine phosphosulfate reductase [Aciduliprofundum boonei
           T469]
          Length = 421

 Score = 42.2 bits (97), Expect = 0.055,   Method: Composition-based stats.
 Identities = 19/168 (11%), Positives = 43/168 (25%), Gaps = 4/168 (2%)

Query: 2   NDIIKKAPSA---LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
           N+ I++   A    + FSGG+DS T L  A     +   +  + G               
Sbjct: 194 NEAIERIKRAKADYVAFSGGKDSETALYLAYKAGVK-RAIYANTGLEFPETERFAYNFAD 252

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
            +   + + +  +    ++    +        TK + ++             R    L  
Sbjct: 253 YLGIELIEIRPKVDFWEMVEKLGVPTKDRRWCTKYLKLEGLKKFKGTIVDGSRKYESLGR 312

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV 166
                        VI       +       +  +     +       +
Sbjct: 313 MLRPQESKLGNLKVIYPILDWLALDVWLFLEWKKLPHNPLYDMGYERI 360


>gi|242309483|ref|ZP_04808638.1| asparagine synthase [Helicobacter pullorum MIT 98-5489]
 gi|239524054|gb|EEQ63920.1| asparagine synthase [Helicobacter pullorum MIT 98-5489]
          Length = 628

 Score = 42.2 bits (97), Expect = 0.055,   Method: Composition-based stats.
 Identities = 21/192 (10%), Positives = 57/192 (29%), Gaps = 14/192 (7%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +  SGG DSS   +   D     +T S  + + +  E      V + +     ++   L 
Sbjct: 268 VCLSGGVDSSLVCAVLKDAGYSFDTFSISFLEASYDEGHYAEEVARVLGVKNHRFACHLK 327

Query: 73  EDHILP--LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
               +   L+ + D      +    + +  +            + L          G   
Sbjct: 328 VAQEIIPTLSFIYDEPFGDSSAIPTLLLAQSIKKTH------KVALSADGGDELGFGYDR 381

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
                               ++  E  + +     + ++   + + K+   ++ + +  Q
Sbjct: 382 YFWAFNRYQKYKKYKNFSFVMKLFEPQLAVSFLQSLGIN---IGIDKF--LRIKEQLCSQ 436

Query: 191 DLVN-LILEESH 201
             +   ++E +H
Sbjct: 437 SFLEHYLIEITH 448


>gi|213966334|ref|ZP_03394516.1| argininosuccinate synthase [Corynebacterium amycolatum SK46]
 gi|213951040|gb|EEB62440.1| argininosuccinate synthase [Corynebacterium amycolatum SK46]
          Length = 399

 Score = 42.2 bits (97), Expect = 0.055,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 1/54 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKK 59
               +L +SGG D++  + +  +  D  V  +S D GQ  +     R      
Sbjct: 1  MTNRVILAYSGGLDTTVAIPYLKEMTDGEVVAVSIDVGQGGEDMESVRQRALDA 54


>gi|171912164|ref|ZP_02927634.1| Asparagine synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 667

 Score = 42.2 bits (97), Expect = 0.055,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 15  FSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
            SGG DSS  L+ A   +   V T +      +  EL+    V + I    P  ++   E
Sbjct: 271 LSGGVDSSMILALACHLQGKNVHTYTVRVDHPDLDELDAASMVARYIGAPSPIVQNFRTE 330

Query: 74  DHI 76
           D +
Sbjct: 331 DIL 333


>gi|153825370|ref|ZP_01978037.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae MZO-2]
 gi|149741054|gb|EDM55123.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae MZO-2]
          Length = 440

 Score = 42.2 bits (97), Expect = 0.055,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 17/52 (32%), Gaps = 4/52 (7%)

Query: 10 SALLLFSGGQDSSTCLSWALDR----FDRVETLSFDYGQRNKVELECRLCVR 57
            LL  SGG DS   L+            V  +   +G     +   + C R
Sbjct: 19 KILLALSGGVDSRVLLALLARGRDEFGWDVAAVHVHHGLSPNADQWAQHCQR 70


>gi|71274784|ref|ZP_00651072.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Xylella fastidiosa Dixon]
 gi|71901076|ref|ZP_00683185.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Xylella fastidiosa Ann-1]
 gi|170729970|ref|YP_001775403.1| tRNA-specific 2-thiouridylase MnmA [Xylella fastidiosa M12]
 gi|205828985|sp|B0U6Q7|MNMA_XYLFM RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|71164516|gb|EAO14230.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Xylella fastidiosa Dixon]
 gi|71729158|gb|EAO31280.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Xylella fastidiosa Ann-1]
 gi|167964763|gb|ACA11773.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Xylella fastidiosa M12]
          Length = 379

 Score = 42.2 bits (97), Expect = 0.055,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 46/189 (24%), Gaps = 11/189 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             P  ++  SGG DSS        + + +  L       +          R+  V +   
Sbjct: 2   NTPRIIVAMSGGVDSSVAAWRLNSQREAIAGLFMRNWTDDGNGQCHAEEDRRDAVAVCGI 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   H    +   +      T  +A            +  R  I        A  L
Sbjct: 62  LG---IAFHFRDFS--HEYWQEVFTHFLAEYANGRTPNPDVLCNRE-IKFKHFLETAREL 115

Query: 127 GITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           G   I  G                    +         LG E       P+  L+K +  
Sbjct: 116 GADRIATGHYARIEHYRQRWHLLRGADRSKDQSYFLHQLGQEQLAATLFPIGDLEKQQLR 175

Query: 182 KLAQDIGGQ 190
           +LA   G  
Sbjct: 176 QLAHQTGLP 184


>gi|205822245|sp|A2CB44|MNMA_PROM3 RecName: Full=tRNA-specific 2-thiouridylase mnmA
          Length = 409

 Score = 42.2 bits (97), Expect = 0.055,   Method: Composition-based stats.
 Identities = 25/198 (12%), Positives = 50/198 (25%), Gaps = 28/198 (14%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +  SGG DSS   +  ++   +VE L+        +      C    +++     + 
Sbjct: 36  RVAVGLSGGVDSSLSAALLVEAGWQVEGLTL------WLMSGKGACCSDGLIDAAGICEQ 89

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR-LGI 128
                H++          + +   +    Q    P         +      + A +   +
Sbjct: 90  LKIPHHVVDS---RATFQAEIVDQLVQGYQQGVTPLPCSRCNRSVKFAAMLSWAEKERQL 146

Query: 129 TNIVIGVCETDYSGYPDCRH------------------DTIRAIETAINLGMESHVTVHT 170
             +  G                                          +L  +    V  
Sbjct: 147 HRVATGHYARIRHREDPEPQQALPGDSSGRHQLLRGLDQNKDQSYFLYDLSQDVLAKVIF 206

Query: 171 PLMWLKKYETWKLAQDIG 188
           PL  L K ET + A+  G
Sbjct: 207 PLGELTKAETRQEAERYG 224


>gi|193716253|ref|XP_001943429.1| PREDICTED: asparagine synthetase [glutamine-hydrolyzing]-like
           [Acyrthosiphon pisum]
          Length = 556

 Score = 42.2 bits (97), Expect = 0.055,   Method: Composition-based stats.
 Identities = 19/149 (12%), Positives = 37/149 (24%), Gaps = 5/149 (3%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDR---VETL-SFDYGQRNKVELECRLCVRK 58
             +        L SGG DSS   S  +           + +F  G  +  ++     V K
Sbjct: 242 KRMMSNRRIGCLLSGGLDSSLIASILVKLSKEKGLPYPIQTFSVGMADSPDILAARQVAK 301

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
            I     +      ED +  L  +     ++    +        +        + + L  
Sbjct: 302 HIGSEHHEV-LFTAEDVLSVLDKVIYTLETADITTIRASCGMYLVARYISQNTDTVVLCS 360

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCR 147
                               D++     R
Sbjct: 361 GEGADEVAQGYIYFRDAPTPDHAHNESLR 389


>gi|188994230|ref|YP_001928482.1| tRNA-specific 2-thiouridylase MnmA [Porphyromonas gingivalis ATCC
           33277]
 gi|229486420|sp|B2RHP0|MNMA_PORG3 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|188593910|dbj|BAG32885.1| putative tRNA 5-methylaminomethyl-2-thiouridylate
           5-methyltransferase [Porphyromonas gingivalis ATCC
           33277]
          Length = 361

 Score = 42.2 bits (97), Expect = 0.055,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 49/181 (27%), Gaps = 6/181 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
            L SGG DSS  +    +   +        G   + E     C  ++ +EL        G
Sbjct: 5   ALVSGGVDSSVVVHRLCEEGYKPAIFYIRIGM--EDEDGYIDCPAEEDIELTTLIARRYG 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
               + + +  +     ++  V    +        +  + I F  F     Y+       
Sbjct: 63  CPFEV-VDLHKEYWERVVSYTVETVRRGLTPNPDMMCNKLIKFGCFEERWGYQFDRIATG 121

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLAQDIGG 189
                   +G            +    L   +   +     P+  L K E   +A   G 
Sbjct: 122 HYATTDLLNGKTYLSTAKDPVKDQTDFLAQINFAQISKLMFPIGHLLKSEVRAIANAAGL 181

Query: 190 Q 190
            
Sbjct: 182 P 182


>gi|172087739|ref|YP_205328.2| tRNA(Ile)-lysidine synthetase [Vibrio fischeri ES114]
 gi|171902329|gb|AAW86440.2| tRNA(Ile)-lysidine synthetase [Vibrio fischeri ES114]
          Length = 456

 Score = 42.2 bits (97), Expect = 0.055,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 34/100 (34%), Gaps = 7/100 (7%)

Query: 7   KAPSALLLFSGGQDSSTCL----SWALDRFDRVETLSFDYG-QRNKVELECRLCVRKKIV 61
           K P  ++  SGG DS   L     +A ++      +  ++G   +  + E          
Sbjct: 30  KKPHLIVALSGGVDSMVLLRLAGMYAKEKQLECMAVHVNHGLSLHANDWEVS--CASYCK 87

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDN 101
           EL            + P   L +++  +    +   +Q N
Sbjct: 88  ELDIPLYIERVNLKVSPQESLEEVARKARYHALEKYMQSN 127


>gi|124023662|ref|YP_001017969.1| tRNA-specific 2-thiouridylase MnmA [Prochlorococcus marinus str.
           MIT 9303]
 gi|123963948|gb|ABM78704.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prochlorococcus marinus str. MIT 9303]
          Length = 431

 Score = 42.2 bits (97), Expect = 0.055,   Method: Composition-based stats.
 Identities = 25/198 (12%), Positives = 50/198 (25%), Gaps = 28/198 (14%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +  SGG DSS   +  ++   +VE L+        +      C    +++     + 
Sbjct: 58  RVAVGLSGGVDSSLSAALLVEAGWQVEGLTL------WLMSGKGACCSDGLIDAAGICEQ 111

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR-LGI 128
                H++          + +   +    Q    P         +      + A +   +
Sbjct: 112 LKIPHHVVDS---RATFQAEIVDQLVQGYQQGVTPLPCSRCNRSVKFAAMLSWAEKERQL 168

Query: 129 TNIVIGVCETDYSGYPDCRH------------------DTIRAIETAINLGMESHVTVHT 170
             +  G                                          +L  +    V  
Sbjct: 169 HRVATGHYARIRHREDPEPQQALPGDSSGRHQLLRGLDQNKDQSYFLYDLSQDVLAKVIF 228

Query: 171 PLMWLKKYETWKLAQDIG 188
           PL  L K ET + A+  G
Sbjct: 229 PLGELTKAETRQEAERYG 246


>gi|77918822|ref|YP_356637.1| GMP synthase [Pelobacter carbinolicus DSM 2380]
 gi|91206814|sp|Q3A590|GUAA_PELCD RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|77544905|gb|ABA88467.1| GMP synthase (glutamine-hydrolyzing) [Pelobacter carbinolicus DSM
           2380]
          Length = 520

 Score = 42.2 bits (97), Expect = 0.055,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 56/185 (30%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +L  SGG DSS   +       D++  +  D G    + L+    V +   + M  
Sbjct: 222 SERVILGLSGGVDSSVAAALIQRAIGDQLVCVFVDNG---LLRLDEGDQVMRTFAQNMGV 278

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +        A+ G+       K +     +                  +A +    
Sbjct: 279 NVIRVNAQDRFMTALAGESDPERKRKIIGNLFVEIFEEE-------------SANIEDAT 325

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +    I     + +G    +   I++      L     + +  PL  L K E   + ++
Sbjct: 326 WLAQGTIYPDVIESAGAKTGKAHNIKSHHNVGGLPEHMKLKLLEPLRELFKDEVRAIGEE 385

Query: 187 IGGQD 191
           +G   
Sbjct: 386 LGLPH 390


>gi|14590117|ref|NP_142181.1| NAD synthetase [Pyrococcus horikoshii OT3]
 gi|6093470|sp|O57921|NADE_PYRHO RecName: Full=Probable NH(3)-dependent NAD(+) synthetase
 gi|146386765|pdb|2E18|A Chain A, Crystal Structure Of Project Ph0182 From Pyrococcus
           Horikoshii Ot3
 gi|146386766|pdb|2E18|B Chain B, Crystal Structure Of Project Ph0182 From Pyrococcus
           Horikoshii Ot3
 gi|3256568|dbj|BAA29251.1| 257aa long hypothetical NH(3)-dependent NAD(+) synthetase
           [Pyrococcus horikoshii OT3]
          Length = 257

 Score = 42.2 bits (97), Expect = 0.055,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 53/190 (27%), Gaps = 37/190 (19%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           K     ++  SGG DS+T    A      ++V  L   Y      ++E    V +K+   
Sbjct: 20  KGNNGVVIGISGGVDSATVAYLATKALGKEKVLGLIMPY--FENKDVEDAKLVAEKLGIG 77

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                     D  +    L                             +   ++     A
Sbjct: 78  YKVINIKPIVDSFVENLELNLDRKG------------------LGNIMSRTRMIMLYAHA 119

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
             LG   +         +GY                       + + P++ L K E W++
Sbjct: 120 NSLGRIVLGTSNRSEFLTGY---------------FTKWGDGASDYAPIINLYKTEVWEI 164

Query: 184 AQDIGGQDLV 193
           A+ IG  + +
Sbjct: 165 AKRIGVPERI 174


>gi|12045151|ref|NP_072962.1| tRNA-specific 2-thiouridylase MnmA [Mycoplasma genitalium G37]
 gi|1723144|sp|P47537|MNMA_MYCGE RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|3844874|gb|AAC71516.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycoplasma genitalium G37]
 gi|166078872|gb|ABY79490.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 367

 Score = 42.2 bits (97), Expect = 0.055,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 48/194 (24%), Gaps = 17/194 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSF----------DYGQRNKVELECRLCVR 57
           A +  +  SGG DS+        ++  V  +             YG +     +      
Sbjct: 5   AKTVFIGLSGGVDSAVSALLLKKQYQEVIGVFMECWDETLNNDFYGHKKINNNKSGCSSF 64

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN--IIF 115
           +   +   K  +SLG   ++   ++    +      +    +           R      
Sbjct: 65  QDF-QQAKKIANSLG-IKLIKKNLIEAYWNKVFLPMIQSFKKGLTPNPDIWCNRFIKFGL 122

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM---ESHVTVHTPL 172
           L           +               P          +    L     E    V  PL
Sbjct: 123 LHDFCKQINPNSLFATGHYAKINMIENQPLLSIPKDTNKDQTYFLANVKKEQFQNVIFPL 182

Query: 173 MWLKKYETWKLAQD 186
             LKK     +A++
Sbjct: 183 ADLKKITVRNIARE 196


>gi|319945971|ref|ZP_08020220.1| tRNA(Ile)-lysidine synthetase [Streptococcus australis ATCC 700641]
 gi|319747779|gb|EFW00024.1| tRNA(Ile)-lysidine synthetase [Streptococcus australis ATCC 700641]
          Length = 424

 Score = 42.2 bits (97), Expect = 0.056,   Method: Composition-based stats.
 Identities = 22/198 (11%), Positives = 47/198 (23%), Gaps = 12/198 (6%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELE-------- 51
           + +     LL  SGG DS T L W           +     ++ QR + + E        
Sbjct: 14  LFESHQKVLLALSGGVDSMTLLDWLYHYQHQLGIDLVLAHVNHHQRVEADQEERGIRELA 73

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
               +  K+      + +S                 +      A  + D          R
Sbjct: 74  EAKHLPLKVAHFSGPFSESRARQFRYDFFEKVMKEEACSAIVTAHHMDDQAETILMRVIR 133

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
                        +     ++I                       +++         + P
Sbjct: 134 GSRPRHLKGIPLKQPFGQGMLIRPLLHFKKKDFPEIFHYEDKSNRSLDYFRNRIRHRYLP 193

Query: 172 LMWLKKYETWKLAQDIGG 189
           L+  +  +      ++G 
Sbjct: 194 LLEEENPQVISALVNLGE 211


>gi|296186909|ref|ZP_06855310.1| tRNA(Ile)-lysidine synthetase [Clostridium carboxidivorans P7]
 gi|296048623|gb|EFG88056.1| tRNA(Ile)-lysidine synthetase [Clostridium carboxidivorans P7]
          Length = 464

 Score = 42.2 bits (97), Expect = 0.056,   Method: Composition-based stats.
 Identities = 23/225 (10%), Positives = 52/225 (23%), Gaps = 25/225 (11%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDY---GQRNKVELECRL 54
             +  K    ++  SGG DS + L             +     ++   G  +  + E   
Sbjct: 12  YRMFNKGDKVIVAVSGGPDSMSLLHILYSLRKQLNIELCAAHVNHCLRGNESDKDEEYVK 71

Query: 55  CVRKKIVELMP--------------KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQD 100
              +K+                      +S G +             ++    +A    D
Sbjct: 72  EFCEKLNIEFRSKSVDINKIMKMQNISCESAGRNARYDFFNDLKKELNAQKIAIAHNAND 131

Query: 101 NNLPNTFVPGRNIIFLVFAATLAYRLGITN----IVIGVCETDYSGYPDCRHDTIRAIET 156
                     R           A R  I       V      +Y    +      +    
Sbjct: 132 QAETILMRIMRGTGLEGLVGIKAVRDNIFVRPLIDVTRHEIEEYCCKENINPRIDKTNLE 191

Query: 157 AINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEESH 201
            I    +  + +   +      +  K+   +     ++    E+ 
Sbjct: 192 TIYSRNKVRLELIPYIQENFNKDIIKVLNRLSDTIKIDNEYLETV 236


>gi|294677395|ref|YP_003578010.1| GMP synthase [Rhodobacter capsulatus SB 1003]
 gi|294476215|gb|ADE85603.1| GMP synthase-1 (glutamine-hydrolyzing) [Rhodobacter capsulatus SB
           1003]
          Length = 518

 Score = 42.2 bits (97), Expect = 0.056,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 57/187 (30%), Gaps = 17/187 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS       +   D++  +  D+G     E         ++V +    
Sbjct: 221 KRVICGLSGGVDSSVAAVLIHEAIGDQLTCVFVDHGLMRLNE-------ADEVVSMFRDN 273

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +            +G +   S   +  +K +        V  R    +  A  LA    
Sbjct: 274 YNIPLIHADEADLFIGALEGVS---DPEVKRKTIGKLFIDVFQREANKIEGAEFLAQGTL 330

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +++  V  +             ++      L  +  + +  PL  L K E   L +++
Sbjct: 331 YPDVIESVSFSGGPSVTI------KSHHNVGGLPEKMGLKLVEPLRELFKDEVRALGREL 384

Query: 188 GGQDLVN 194
           G  +   
Sbjct: 385 GLPEKFI 391


>gi|294651044|ref|ZP_06728383.1| ANH superfamily adenosine nucleotide alpha hydrolase [Acinetobacter
           haemolyticus ATCC 19194]
 gi|292823057|gb|EFF81921.1| ANH superfamily adenosine nucleotide alpha hydrolase [Acinetobacter
           haemolyticus ATCC 19194]
          Length = 230

 Score = 42.2 bits (97), Expect = 0.056,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 42/120 (35%), Gaps = 7/120 (5%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSF--DYGQR---NKVELECRLCVRKKIV- 61
              +++ FSGG+DSS  L  A+     +  +    + GQR   + + L+        I  
Sbjct: 11  NSRSVVSFSGGKDSSLALYHAMQTGTVIGLIVMLEEQGQRSRSHAMPLDIIHAQANAIGL 70

Query: 62  -ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
              M     +  E   + L       ++ +     + + ++   +  V  +  + L    
Sbjct: 71  PVFMASSSWADYETKFIELLEQAKQQNAEVLVTGDLDMPEHGCWHDRVTQQVGLKLGMPL 130


>gi|291526037|emb|CBK91624.1| sulfate adenylyltransferase subunit 2 [Eubacterium rectale DSM
           17629]
 gi|291527228|emb|CBK92814.1| sulfate adenylyltransferase subunit 2 [Eubacterium rectale M104/1]
          Length = 299

 Score = 42.2 bits (97), Expect = 0.056,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 56/183 (30%), Gaps = 16/183 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRK-KIVEL 63
              ++L+S G+DSS  L  A+  F         L  +   +    +E R  + K K +E+
Sbjct: 26  EKPVMLYSIGKDSSVMLHLAMKAFYPEKPPFPFLHVNTTWKFHEMIEFRDRIAKEKGIEM 85

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +        +  I P       +    T+ +   +        F  GR            
Sbjct: 86  LEYINQDGVKQGINPFDHGSAYTDIMKTQALKQALDKYGFTAAFGGGRRD--------EE 137

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
                  I     E       + R +  +   + I  G E  V    PL    + + W+ 
Sbjct: 138 KSRAKERIFSFRNENHAWDPKNQRPEMWKLYNSRIKKGQEVRV---FPLSNWTEKDIWQY 194

Query: 184 AQD 186
            + 
Sbjct: 195 IKR 197


>gi|283477583|emb|CAY73499.1| GMP synthase [Erwinia pyrifoliae DSM 12163]
          Length = 534

 Score = 42.2 bits (97), Expect = 0.056,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 50/184 (27%), Gaps = 17/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS           DR+  +  D G    + L     V +   +     
Sbjct: 237 DKVILGLSGGVDSSVTAMLLHRAIGDRLTCVFVDNG---LLRLNEAEQVMEMFGDHFGLN 293

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  ++    A+ G     +  K +     +                           
Sbjct: 294 IIHVAAENRFLDALAGTDEPEAKRKIIGRVFVEVFDEKATKLSDVKWLAQGT-------- 345

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 346 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKLGLVEPLKELFKDEVRKIGLEL 400

Query: 188 GGQD 191
           G   
Sbjct: 401 GLPH 404


>gi|259907729|ref|YP_002648085.1| GMP synthase [Erwinia pyrifoliae Ep1/96]
 gi|224963351|emb|CAX54836.1| GMP synthase [glutamine-hydrolyzing] [Erwinia pyrifoliae Ep1/96]
          Length = 526

 Score = 42.2 bits (97), Expect = 0.056,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 50/184 (27%), Gaps = 17/184 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS           DR+  +  D G    + L     V +   +     
Sbjct: 229 DKVILGLSGGVDSSVTAMLLHRAIGDRLTCVFVDNG---LLRLNEAEQVMEMFGDHFGLN 285

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  ++    A+ G     +  K +     +                           
Sbjct: 286 IIHVAAENRFLDALAGTDEPEAKRKIIGRVFVEVFDEKATKLSDVKWLAQGT-------- 337

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 338 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKLGLVEPLKELFKDEVRKIGLEL 392

Query: 188 GGQD 191
           G   
Sbjct: 393 GLPH 396


>gi|293332519|ref|NP_001169688.1| hypothetical protein LOC100383569 [Zea mays]
 gi|224030901|gb|ACN34526.1| unknown [Zea mays]
          Length = 545

 Score = 42.2 bits (97), Expect = 0.056,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 16/43 (37%), Gaps = 1/43 (2%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELEC 52
            +   SGG DS+   +       DR+  +  D G     E E 
Sbjct: 241 VICALSGGVDSTVAATLVHKAIGDRLHCVFVDNGLLRYKEGER 283


>gi|170692027|ref|ZP_02883191.1| Sulfate adenylyltransferase [Burkholderia graminis C4D1M]
 gi|170143311|gb|EDT11475.1| Sulfate adenylyltransferase [Burkholderia graminis C4D1M]
          Length = 320

 Score = 42.2 bits (97), Expect = 0.056,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 53/195 (27%), Gaps = 19/195 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF------DRVET---LSFDYGQRNKVELE 51
           + +++ +     LLFSGG+DS   L+ AL  F        V     +  D G      ++
Sbjct: 34  LRELVAECSKPALLFSGGKDSVVVLALALKAFGIGANRKTVLPFPLVHIDTGHNYDEVID 93

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
            R    K+I          L   H+      G +     T +         L      G 
Sbjct: 94  FRDRRAKEIGA-------ELVVGHVEDSIKRGTVRLRRETDSRNAAQAVTLLETIEQHGY 146

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
             +                I     E         R +        ++ G    V    P
Sbjct: 147 TALIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHNGEHLRV---FP 203

Query: 172 LMWLKKYETWKLAQD 186
           +    + + W+    
Sbjct: 204 ISNWTELDVWQYIAR 218


>gi|169632146|ref|YP_001705882.1| GMP synthase [Acinetobacter baumannii SDF]
 gi|169150938|emb|CAO99551.1| GMP synthetase (glutamine aminotransferase) [Acinetobacter
           baumannii]
          Length = 522

 Score = 42.2 bits (97), Expect = 0.056,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 50/189 (26%), Gaps = 17/189 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS   +       D++  +  D G     E +    V +   E M  
Sbjct: 224 NEKVLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRLNEGD---QVMQMFAENMGI 280

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                  +     A+ G     +  K +  +  +                          
Sbjct: 281 RVIRADAEARFLNALAGVTDPEAKRKIIGREFIEVFAEEARKLDGVKFLAQGT------- 333

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                 I     + +     +   I++      L  +    +  PL  L K E  KL   
Sbjct: 334 ------IYPDVIESAASKQGKAHVIKSHHNVGGLPDDLAFELVEPLRDLFKDEVRKLGTT 387

Query: 187 IGGQDLVNL 195
           +G    +  
Sbjct: 388 LGLPHSMIY 396


>gi|169797667|ref|YP_001715460.1| GMP synthase [Acinetobacter baumannii AYE]
 gi|184156475|ref|YP_001844814.1| GMP synthase [Acinetobacter baumannii ACICU]
 gi|213155539|ref|YP_002317584.1| GMP synthase [Acinetobacter baumannii AB0057]
 gi|215485021|ref|YP_002327262.1| GMP synthase [Acinetobacter baumannii AB307-0294]
 gi|239503066|ref|ZP_04662376.1| GMP synthase [Acinetobacter baumannii AB900]
 gi|260557610|ref|ZP_05829824.1| GMP synthase domain-containing protein [Acinetobacter baumannii
           ATCC 19606]
 gi|301345547|ref|ZP_07226288.1| GMP synthase [Acinetobacter baumannii AB056]
 gi|301512572|ref|ZP_07237809.1| GMP synthase [Acinetobacter baumannii AB058]
 gi|301596487|ref|ZP_07241495.1| GMP synthase [Acinetobacter baumannii AB059]
 gi|332852631|ref|ZP_08434285.1| GMP synthase domain protein [Acinetobacter baumannii 6013150]
 gi|332869346|ref|ZP_08438724.1| GMP synthase domain protein [Acinetobacter baumannii 6013113]
 gi|332875608|ref|ZP_08443420.1| GMP synthase domain protein [Acinetobacter baumannii 6014059]
 gi|169150594|emb|CAM88503.1| GMP synthetase (glutamine aminotransferase) [Acinetobacter
           baumannii AYE]
 gi|183208069|gb|ACC55467.1| GMP synthase, PP-ATPase domain/subunit [Acinetobacter baumannii
           ACICU]
 gi|193076025|gb|ABO10615.2| GMP synthetase [Acinetobacter baumannii ATCC 17978]
 gi|213054699|gb|ACJ39601.1| GMP synthase [Acinetobacter baumannii AB0057]
 gi|213986883|gb|ACJ57182.1| GMP synthase [Acinetobacter baumannii AB307-0294]
 gi|260408783|gb|EEX02087.1| GMP synthase domain-containing protein [Acinetobacter baumannii
           ATCC 19606]
 gi|322506343|gb|ADX01797.1| guaA [Acinetobacter baumannii 1656-2]
 gi|323516212|gb|ADX90593.1| GMP synthase [Acinetobacter baumannii TCDC-AB0715]
 gi|332729099|gb|EGJ60446.1| GMP synthase domain protein [Acinetobacter baumannii 6013150]
 gi|332732764|gb|EGJ63980.1| GMP synthase domain protein [Acinetobacter baumannii 6013113]
 gi|332736181|gb|EGJ67196.1| GMP synthase domain protein [Acinetobacter baumannii 6014059]
          Length = 522

 Score = 42.2 bits (97), Expect = 0.056,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 50/189 (26%), Gaps = 17/189 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS   +       D++  +  D G     E +    V +   E M  
Sbjct: 224 NEKVLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRLNEGD---QVMQMFAENMGI 280

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                  +     A+ G     +  K +  +  +                          
Sbjct: 281 RVIRADAEARFLNALAGVTDPEAKRKIIGREFIEVFAEEARKLDGVKFLAQGT------- 333

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                 I     + +     +   I++      L  +    +  PL  L K E  KL   
Sbjct: 334 ------IYPDVIESAASKQGKAHVIKSHHNVGGLPDDLAFELVEPLRDLFKDEVRKLGTT 387

Query: 187 IGGQDLVNL 195
           +G    +  
Sbjct: 388 LGLPHSMIY 396


>gi|119029679|gb|ABL59963.1| GMP synthase [uncultured bacterium]
          Length = 419

 Score = 42.2 bits (97), Expect = 0.056,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 46/186 (24%), Gaps = 21/186 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMP 65
               +   SGG DSS           +R   +  D G  R+           +K+ E   
Sbjct: 123 KGKVICGLSGGVDSSVVAMLLNKAIGNRSVPIFIDNGLLRHNE--------ARKVKEAFT 174

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           K      +   +  + L               I D  L    +    I      A     
Sbjct: 175 K---FGVKIKTIDASDLFLRRL--------KGIADPELKRKKIGRAFIEVFSAEAKKFKG 223

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                      +   S        TI+       L     + +  PL  L K E   + +
Sbjct: 224 AHFLAQGTLYPDLIESVSYKGPSATIKTHHNVGGLPKRMKLKLIEPLKELFKDEVRLVGR 283

Query: 186 DIGGQD 191
            +G   
Sbjct: 284 KLGLPK 289


>gi|157736939|ref|YP_001489622.1| putative LPS biosynthesis protein WbpG [Arcobacter butzleri RM4018]
 gi|157698793|gb|ABV66953.1| putative LPS biosynthesis protein WbpG [Arcobacter butzleri RM4018]
          Length = 381

 Score = 42.2 bits (97), Expect = 0.056,   Method: Composition-based stats.
 Identities = 24/182 (13%), Positives = 45/182 (24%), Gaps = 9/182 (4%)

Query: 2   NDIIKKAP-----SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
            + +KK         +L  SGG DSS       +   R   +  D G  +++ ++    +
Sbjct: 57  YEKMKKENAHKDYDCILGLSGGVDSSYLALKLYEAGIRPLVVHVDGGWNSELAVQNIENI 116

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
                  +        E   L LA L     S++      +             +  I  
Sbjct: 117 VNYCGWHLHTIVIDWEEMRDLQLAYLK----SAIANQDVPQDHAFFASLYHFATKYGINY 172

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
           V +        I          D        +                 +  + P +   
Sbjct: 173 VISGGNLATESIFPKAWHWSAMDADNLCAIHNKFGSKKLRNYKTIGFYELYFYYPFIKKM 232

Query: 177 KY 178
           K 
Sbjct: 233 KT 234


>gi|126640233|ref|YP_001083217.1| GMP synthase [Acinetobacter baumannii ATCC 17978]
          Length = 485

 Score = 42.2 bits (97), Expect = 0.056,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 50/189 (26%), Gaps = 17/189 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS   +       D++  +  D G     E +    V +   E M  
Sbjct: 187 NEKVLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRLNEGD---QVMQMFAENMGI 243

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                  +     A+ G     +  K +  +  +                          
Sbjct: 244 RVIRADAEARFLNALAGVTDPEAKRKIIGREFIEVFAEEARKLDGVKFLAQGT------- 296

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                 I     + +     +   I++      L  +    +  PL  L K E  KL   
Sbjct: 297 ------IYPDVIESAASKQGKAHVIKSHHNVGGLPDDLAFELVEPLRDLFKDEVRKLGTT 350

Query: 187 IGGQDLVNL 195
           +G    +  
Sbjct: 351 LGLPHSMIY 359


>gi|46578552|ref|YP_009360.1| hypothetical protein DVU0135 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120603868|ref|YP_968268.1| PP-loop domain-containing protein [Desulfovibrio vulgaris DP4]
 gi|46447963|gb|AAS94619.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120564097|gb|ABM29841.1| PP-loop domain protein [Desulfovibrio vulgaris DP4]
 gi|311232477|gb|ADP85331.1| PP-loop domain protein [Desulfovibrio vulgaris RCH1]
          Length = 303

 Score = 42.2 bits (97), Expect = 0.056,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 17/56 (30%), Gaps = 2/56 (3%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
              L+  SGG+DS   +     +   V  L  D              V ++   L 
Sbjct: 48  DRILVALSGGKDSLALMLELSRQGYNVTGLHIDLAIPVSSP--AARGVVERFCALH 101


>gi|15606536|ref|NP_213916.1| hypothetical protein aq_1333 [Aquifex aeolicus VF5]
 gi|2983761|gb|AAC07321.1| hypothetical protein aq_1333 [Aquifex aeolicus VF5]
          Length = 301

 Score = 42.2 bits (97), Expect = 0.056,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 22/70 (31%), Gaps = 5/70 (7%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
            +  K    L+  SGG+DS              + L  + G       E     ++K+++
Sbjct: 43  KMFTKKDKVLVAISGGKDSLALWHVLRKLGYEADGLYINLGI-----GEYSEKSKEKVLK 97

Query: 63  LMPKWKDSLG 72
              K      
Sbjct: 98  FAEKINGKAI 107


>gi|323700751|ref|ZP_08112663.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Desulfovibrio sp. ND132]
 gi|323460683|gb|EGB16548.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Desulfovibrio desulfuricans ND132]
          Length = 345

 Score = 42.2 bits (97), Expect = 0.056,   Method: Composition-based stats.
 Identities = 7/27 (25%), Positives = 13/27 (48%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLS 39
          +  SGG DS   L+   +R + +  + 
Sbjct: 5  VAVSGGMDSLLALALLKERGEPLLAVH 31


>gi|291276778|ref|YP_003516550.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Helicobacter mustelae 12198]
 gi|290963972|emb|CBG39811.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Helicobacter mustelae 12198]
          Length = 342

 Score = 42.2 bits (97), Expect = 0.056,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 49/176 (27%), Gaps = 15/176 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              LL SGG DSS        +   V+     Y + +  E +      +  ++   K   
Sbjct: 2   KVALLMSGGVDSSYSAYLLKKQGYEVKGF---YLKLHDKEEKH-----QVFLKNCHKVAQ 53

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +L  D  +      +     +        Q    PN       ++    A  +A + G  
Sbjct: 54  NLQIDFQVIE--AKEEFRQKVYNEFVNAYQRGETPNPCALCNPLMKFGLALDIALQQGCE 111

Query: 130 NIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            I  G            R       T         +  ++   +  PL  + K E 
Sbjct: 112 RIATGHYARIGHVDGVTRIREAKDKTKDQSYFLYAISQDAINRLIFPLGDMLKEEV 167


>gi|262376896|ref|ZP_06070123.1| GMP synthase domain-containing protein [Acinetobacter lwoffii
           SH145]
 gi|262308241|gb|EEY89377.1| GMP synthase domain-containing protein [Acinetobacter lwoffii
           SH145]
          Length = 522

 Score = 42.2 bits (97), Expect = 0.056,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 17/188 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS   +       D++  +  D G     E +          ++M  +
Sbjct: 225 EKVLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRLNEGD----------QVMQMF 274

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D++G    +  A   +   ++L   V  + +   +   F+                  G
Sbjct: 275 ADNMG--IRVIRADAEERFLTALAGEVDPEAKRKIIGREFIAVFAEEARKLDGVKFLAQG 332

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                      + +     +   I++      L  +    +  PL  L K E  KL   +
Sbjct: 333 TIY----PDVIESAASKQGKAHVIKSHHNVGGLPADLAFELVEPLRDLFKDEVRKLGTTL 388

Query: 188 GGQDLVNL 195
           G    +  
Sbjct: 389 GLPHSMIY 396


>gi|299820646|ref|ZP_07052535.1| hypoxanthine phosphoribosyltransferase [Listeria grayi DSM 20601]
 gi|299817667|gb|EFI84902.1| hypoxanthine phosphoribosyltransferase [Listeria grayi DSM 20601]
          Length = 646

 Score = 42.2 bits (97), Expect = 0.056,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 55/199 (27%), Gaps = 22/199 (11%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIV 61
           ++ +    L+  SGG DS   L + +  F    +  +  ++  R +   E      + +V
Sbjct: 17  LLDRNKKILVAVSGGPDSLALLHFIVRFFPLQNIAAVHVNHQLRAESLDE------ETLV 70

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
               +          + +  +       + +                 G + +     A 
Sbjct: 71  HDSCQTLGVDLFSRTIDVKAIAAERKKGIEEAARYVRYQCFEEVMQEAGIDQVVTAHHAD 130

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
                 +  +V G   + +SG    R                    V  P +   K +  
Sbjct: 131 DQVETIMMRLVRGSFSSGWSGIAPVRKLGAG--------------QVIRPFLTASKSDIL 176

Query: 182 KLAQDIGGQDLVNLILEES 200
              Q    Q  ++   EE+
Sbjct: 177 AYCQRQDIQFALDDTNEET 195


>gi|229159237|ref|ZP_04287262.1| tRNA(Ile)-lysidine synthase [Bacillus cereus R309803]
 gi|228624252|gb|EEK81053.1| tRNA(Ile)-lysidine synthase [Bacillus cereus R309803]
          Length = 480

 Score = 42.2 bits (97), Expect = 0.056,   Method: Composition-based stats.
 Identities = 22/196 (11%), Positives = 53/196 (27%), Gaps = 23/196 (11%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRK 58
           D++++  + ++  SGG DS   L + L++ +     +     D    +    +      +
Sbjct: 21  DVLEERSTIVVGVSGGPDSLALLYYLLEKKEAKRWEIVVAHVD----HMFRGDESHEDLQ 76

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
            + +L  +         I           ++       +             R  + L  
Sbjct: 77  FVQDLCKELGVICETIRINVSQYQQQYGMNAQVAARECRYAFLERIMKKYDAR-YVALGH 135

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
                    +  +V G     Y+G    R                    +  PL+ + K 
Sbjct: 136 HGDDQVETILMRLVRGSTPKGYAGIAVKRSFHNG--------------YLIRPLLGVTKE 181

Query: 179 ETWKLAQDIGGQDLVN 194
           E       +     ++
Sbjct: 182 EIINYCNKLNVIPRID 197


>gi|216997248|ref|YP_002333796.1| GMP synthase [Borrelia afzelii ACA-1]
 gi|216753145|gb|ACJ73695.1| GMP synthase [Borrelia afzelii ACA-1]
          Length = 511

 Score = 42.2 bits (97), Expect = 0.056,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 60/196 (30%), Gaps = 25/196 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +L  SGG DS  C           +  +  + G   K E        KKI+EL  +
Sbjct: 215 SKKVILGLSGGTDSLVCALLIKKAIKGNLICVFVNTGLLRKNED-------KKILELKQQ 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           +  +      +          + L      + +   +   FV     I L          
Sbjct: 268 YDLN------IQYIDASKKFLNHLKNISDPEEKRKIIGKEFVNVFEKITL-------EDQ 314

Query: 127 GITNIVIGVCETDY--SGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            I  +  G   +D   S   +     I++      L  +  + +  PL    K E  ++ 
Sbjct: 315 NIEYLAQGTIYSDVIESKSKNNASSKIKSHHNVGGLPDKMSLKLLEPLNEFFKDEIIQIG 374

Query: 185 QDIG--GQDLVNLILE 198
            ++G   +DL      
Sbjct: 375 INLGIKKEDLYRHPFP 390


>gi|332186867|ref|ZP_08388609.1| GMP synthase (glutamine-hydrolyzing) [Sphingomonas sp. S17]
 gi|332013200|gb|EGI55263.1| GMP synthase (glutamine-hydrolyzing) [Sphingomonas sp. S17]
          Length = 517

 Score = 42.2 bits (97), Expect = 0.057,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 54/185 (29%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DSS       +   D++  +  D G   + E        +++V L   
Sbjct: 219 SGRVICGLSGGVDSSVAALLIHEAIGDQLTCVFVDGGILRQGE-------AEQVVSLFR- 270

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   + +PL  +                +                       A  L
Sbjct: 271 ------GHYNIPLVHVDAQELFMGGLAGVTDPEAKRKFIGKTFIDVFEAEAKKIGGAEFL 324

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+    +      TI++      L    ++ +  PL  L K E   L ++
Sbjct: 325 AQGTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRVLGRE 382

Query: 187 IGGQD 191
           +G  D
Sbjct: 383 LGLPD 387


>gi|326471688|gb|EGD95697.1| GMP synthase subunit B [Trichophyton tonsurans CBS 112818]
 gi|326483640|gb|EGE07650.1| GMP synthase [Trichophyton equinum CBS 127.97]
          Length = 541

 Score = 42.2 bits (97), Expect = 0.057,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 57/195 (29%), Gaps = 12/195 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
             ++ +    +   SGG DS+       +   DR   +  D G    + L     VR+ +
Sbjct: 228 RAMVGEHGQVIGAVSGGVDSTVAAKLMKEAIGDRFHAVLVDNG---VMRLNEAEIVRETL 284

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                  K+      ++  +         +      +    N             +  +A
Sbjct: 285 ------TKNLGINLTVIDASEKFLGRLKGVVDPEQKRKIIGNTFIEIFQDTAKTLVEESA 338

Query: 121 TLAYRLGITNIVIGVCETDY--SGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
                  I  ++ G    D   S        TI+       L    H+ +  PL  L K 
Sbjct: 339 GYKEGDKIEWLLQGTLYPDVIESISFKGPSATIKTHHNVGGLLKGMHLKLIEPLRELFKD 398

Query: 179 ETWKLAQDIGGQDLV 193
           E   L  ++G  + +
Sbjct: 399 EVRSLGTNLGIPEDL 413


>gi|327309540|ref|XP_003239461.1| GMP synthase subunit B [Trichophyton rubrum CBS 118892]
 gi|326459717|gb|EGD85170.1| GMP synthase subunit B [Trichophyton rubrum CBS 118892]
          Length = 541

 Score = 42.2 bits (97), Expect = 0.057,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 57/195 (29%), Gaps = 12/195 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
             ++ +    +   SGG DS+       +   DR   +  D G    + L     VR+ +
Sbjct: 228 RAMVGEHGQVIGAVSGGVDSTVAAKLMKEAIGDRFHAVLVDNG---VMRLNEAEIVRETL 284

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                  K+      ++  +         +      +    N             +  +A
Sbjct: 285 ------TKNLGINLTVIDASEKFLGRLKGVVDPEQKRKIIGNTFIEIFQDTAKTLVEESA 338

Query: 121 TLAYRLGITNIVIGVCETDY--SGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
                  I  ++ G    D   S        TI+       L    H+ +  PL  L K 
Sbjct: 339 GYKEGDKIEWLLQGTLYPDVIESISFKGPSATIKTHHNVGGLLKGMHLKLIEPLRELFKD 398

Query: 179 ETWKLAQDIGGQDLV 193
           E   L  ++G  + +
Sbjct: 399 EVRSLGTNLGIPEDL 413


>gi|317479105|ref|ZP_07938246.1| N-acetyl sugar amidotransferase [Bacteroides sp. 4_1_36]
 gi|316904761|gb|EFV26574.1| N-acetyl sugar amidotransferase [Bacteroides sp. 4_1_36]
          Length = 380

 Score = 42.2 bits (97), Expect = 0.057,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 24/74 (32%), Gaps = 1/74 (1%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +L  SGG DS   L  A+     R      D G    V  E    +  K+   +   K 
Sbjct: 70  CILGLSGGLDSCYMLHLAVKEWGLRPFVFHIDAGWNLPVAEENIKKLCDKLNVHLHIQKL 129

Query: 70  SLGEDHILPLAILG 83
              E   + +A   
Sbjct: 130 DFEELKQMQIAFFK 143


>gi|331661562|ref|ZP_08362486.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
          (tRNA(Ile)-2-lysyl-cytidine synthase) [Escherichia coli
          TA143]
 gi|331061477|gb|EGI33440.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
          (tRNA(Ile)-2-lysyl-cytidine synthase) [Escherichia coli
          TA143]
          Length = 432

 Score = 42.2 bits (97), Expect = 0.057,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 5/60 (8%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCL-----SWALDRFDRVETLSFDYGQRNKVELECRLC 55
          +N  +  +   L+ FSGG DS+  L       A +    +  +   +G     +   R C
Sbjct: 5  LNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRAENPGVTLRAIHVHHGLSANADAWVRHC 64


>gi|300724650|ref|YP_003713975.1| ATP-sulfurylase subunit 2 [Xenorhabdus nematophila ATCC 19061]
 gi|297631192|emb|CBJ91887.1| ATP-sulfurylase, subunit 2 (ATP:sulfate adenylyltransferase)
           [Xenorhabdus nematophila ATCC 19061]
          Length = 302

 Score = 42.2 bits (97), Expect = 0.057,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 52/176 (29%), Gaps = 13/176 (7%)

Query: 12  LLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++L+S G+DSS  L  A   F         L  D G + +   + R    +K    +  +
Sbjct: 31  VMLYSIGKDSSVMLHLARKAFYPGKLPFPLLHVDTGWKFRDMYDFRDRTAEKYGFELLVY 90

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           ++  GE   +   I G   H+ + K   +K            G+      F         
Sbjct: 91  RNPQGEALGINPFIHGSAKHTDIMKTEGLKQA---------LGKYGFDAAFGGARRDEEK 141

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
                      D S   D ++              +       PL    + + W+ 
Sbjct: 142 SRAKERIYSFRDRSHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTELDIWQY 197


>gi|302497947|ref|XP_003010972.1| hypothetical protein ARB_02704 [Arthroderma benhamiae CBS 112371]
 gi|302664979|ref|XP_003025848.1| hypothetical protein TRV_01737 [Trichophyton verrucosum HKI 0517]
 gi|291174519|gb|EFE30332.1| hypothetical protein ARB_02704 [Arthroderma benhamiae CBS 112371]
 gi|291188145|gb|EFE43494.1| hypothetical protein TRV_01737 [Trichophyton verrucosum HKI 0517]
          Length = 541

 Score = 42.2 bits (97), Expect = 0.057,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 57/195 (29%), Gaps = 12/195 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
             ++ +    +   SGG DS+       +   DR   +  D G    + L     VR+ +
Sbjct: 228 RAMVGEHGQVIGAVSGGVDSTVAAKLMKEAIGDRFHAVLVDNG---VMRLNEAEIVRETL 284

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                  K+      ++  +         +      +    N             +  +A
Sbjct: 285 ------TKNLGINLTVIDASEKFLGRLKGVVDPEQKRKIIGNTFIEIFQDTAKTLVEESA 338

Query: 121 TLAYRLGITNIVIGVCETDY--SGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
                  I  ++ G    D   S        TI+       L    H+ +  PL  L K 
Sbjct: 339 GYKEGDKIEWLLQGTLYPDVIESISFKGPSATIKTHHNVGGLLKGMHLKLIEPLRELFKD 398

Query: 179 ETWKLAQDIGGQDLV 193
           E   L  ++G  + +
Sbjct: 399 EVRSLGTNLGIPEDL 413


>gi|229513885|ref|ZP_04403347.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae TMA 21]
 gi|229349066|gb|EEO14023.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae TMA 21]
          Length = 440

 Score = 42.2 bits (97), Expect = 0.057,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 17/52 (32%), Gaps = 4/52 (7%)

Query: 10 SALLLFSGGQDSSTCLSWALDR----FDRVETLSFDYGQRNKVELECRLCVR 57
            LL  SGG DS   L+            V  +   +G     +   + C R
Sbjct: 19 KILLALSGGVDSRVLLALLARGRDEFGWDVAAVHVHHGLSPNADQWAQHCQR 70


>gi|218703442|ref|YP_002410961.1| tRNA (Ile)-lysidine synthetase [Escherichia coli UMN026]
 gi|293403257|ref|ZP_06647354.1| tilS [Escherichia coli FVEC1412]
 gi|298378793|ref|ZP_06988677.1| tilS [Escherichia coli FVEC1302]
 gi|300900770|ref|ZP_07118916.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 198-1]
 gi|218430539|emb|CAR11405.1| tRNA(Ile)-lysidine synthetase [Escherichia coli UMN026]
 gi|284919963|emb|CBG33018.1| tRNA(Ile)-lysidine synthase [Escherichia coli 042]
 gi|291430172|gb|EFF03186.1| tilS [Escherichia coli FVEC1412]
 gi|298281127|gb|EFI22628.1| tilS [Escherichia coli FVEC1302]
 gi|300355755|gb|EFJ71625.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 198-1]
          Length = 431

 Score = 42.2 bits (97), Expect = 0.057,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 5/60 (8%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCL-----SWALDRFDRVETLSFDYGQRNKVELECRLC 55
          +N  +  +   L+ FSGG DS+  L       A +    +  +   +G     +   R C
Sbjct: 5  LNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRAENPGVTLRAIHVHHGLSANADAWVRHC 64


>gi|254415451|ref|ZP_05029211.1| NAD synthase family [Microcoleus chthonoplastes PCC 7420]
 gi|196177632|gb|EDX72636.1| NAD synthase family [Microcoleus chthonoplastes PCC 7420]
          Length = 586

 Score = 42.2 bits (97), Expect = 0.057,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 57/192 (29%), Gaps = 16/192 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              ++  SGG DSS   + A +   R   L       +  E          I + +   K
Sbjct: 303 KRVVIGLSGGIDSSLVAALATEALGRENVLGVLMPSPHSSE--------HSINDALALAK 354

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +   + H LP+  L        T +      +       +  R    L+ A    +    
Sbjct: 355 NLGIKTHTLPIGELMQGY--DQTLDPLFAGTEFGTAEENIQARIRGNLLMAIANKFD--- 409

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             ++    +++ +      +  +     AI    ++ V      +   K    K  +   
Sbjct: 410 YLLISTGNKSEMAVGYCTLYGDMNGGLAAIADVPKTRVYSLCQWLNSTK---VKRQESQA 466

Query: 189 GQDLVNLILEES 200
             + +   L ++
Sbjct: 467 TPEQLPAQLSDT 478


>gi|325684233|gb|EGD26408.1| argininosuccinate synthase [Lactobacillus delbrueckii subsp.
          lactis DSM 20072]
          Length = 371

 Score = 42.2 bits (97), Expect = 0.057,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 2/46 (4%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQ 44
          MN    K    +L +SGG D+S  + W  + ++   +  +S + GQ
Sbjct: 1  MNIDKSKIKKIVLAYSGGLDTSVIIPWLKENYNNPEIIAVSANVGQ 46


>gi|313897811|ref|ZP_07831352.1| argininosuccinate synthase [Clostridium sp. HGF2]
 gi|312957346|gb|EFR38973.1| argininosuccinate synthase [Clostridium sp. HGF2]
          Length = 407

 Score = 42.2 bits (97), Expect = 0.057,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 48/158 (30%), Gaps = 10/158 (6%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           K     +L +SGG D+S  + W  + +    V  +S D GQ  +++      ++    +L
Sbjct: 4   KDIKKVILAYSGGLDTSIIIPWLKENYNNCEVVAVSADVGQGTELDGLEEKAIKTGASKL 63

Query: 64  MP-KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                KD   ED+I P          +      + +         +  + +         
Sbjct: 64  YILDLKDEFVEDYIYP-------CLKANAIYEDVYLLGTAFARPLIGQKLVEIAKQEGAD 116

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         + +         I A      L
Sbjct: 117 AICHGCTGKGNDQVRFELAIKAFAPDMPIIAPWRTWEL 154


>gi|300811174|ref|ZP_07091685.1| argininosuccinate synthase [Lactobacillus delbrueckii subsp.
          bulgaricus PB2003/044-T3-4]
 gi|313123551|ref|YP_004033810.1| argininosuccinate synthase [Lactobacillus delbrueckii subsp.
          bulgaricus ND02]
 gi|300497839|gb|EFK32850.1| argininosuccinate synthase [Lactobacillus delbrueckii subsp.
          bulgaricus PB2003/044-T3-4]
 gi|312280114|gb|ADQ60833.1| Argininosuccinate synthase [Lactobacillus delbrueckii subsp.
          bulgaricus ND02]
          Length = 408

 Score = 42.2 bits (97), Expect = 0.057,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 2/46 (4%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD--RVETLSFDYGQ 44
          MN    K    +L +SGG D+S  + W  + ++   +  +S + GQ
Sbjct: 1  MNIDKSKIKKIVLAYSGGLDTSVIIPWLKENYNNPEIIAVSANVGQ 46


>gi|284161710|ref|YP_003400333.1| phosphoadenosine phosphosulfate reductase [Archaeoglobus profundus
           DSM 5631]
 gi|284011707|gb|ADB57660.1| phosphoadenosine phosphosulfate reductase [Archaeoglobus profundus
           DSM 5631]
          Length = 396

 Score = 42.2 bits (97), Expect = 0.057,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 19/49 (38%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           + FSGG+DS  CL  A      V+ +            E    V K++ 
Sbjct: 226 VPFSGGKDSLACLILAKKALGDVKAIYIKTNYEMPYTEEYIERVCKRLG 274


>gi|257459254|ref|ZP_05624371.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter gracilis RM3268]
 gi|257443353|gb|EEV18479.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Campylobacter gracilis RM3268]
          Length = 343

 Score = 42.2 bits (97), Expect = 0.057,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 49/183 (26%), Gaps = 15/183 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK--KIVELMPKW 67
             L+  SGG DSS C     D    V+         +         + K  K+ E +   
Sbjct: 2   KILIAMSGGVDSSMCAKLLQDAGHEVQGCYMK---LHAKPGYHEANIAKVRKVGEFL--- 55

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                + HIL    L D  +  + +           PN        I L      A   G
Sbjct: 56  ---GIKIHILD---LQDDFNRDVYEPFVQAYIGGLTPNPCALCNRRIKLGKLLEFAREQG 109

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM-WLKKYETWKLAQD 186
              +  G       G      D  +     +     + +      +  + K +  + A+ 
Sbjct: 110 FERLATGHYVRIEDGLLKAAADLSKDQSYFLANIDPAALEFMLFPLGGMYKKDVKEAARA 169

Query: 187 IGG 189
              
Sbjct: 170 YAE 172


>gi|217425605|ref|ZP_03457097.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei 576]
 gi|217391382|gb|EEC31412.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei 576]
          Length = 321

 Score = 42.2 bits (97), Expect = 0.057,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 51/195 (26%), Gaps = 19/195 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF---------DRVETLSFDYGQRNKVELE 51
           + +++ +     LLFSGG+DS   L  AL  F              +  D G      ++
Sbjct: 35  LRELVAECGKPALLFSGGKDSVVVLHLALKAFGLGANRRTTLPFPLVHIDTGHNYDEVID 94

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
            R    K+I          L   H+      G +     T +         L      G 
Sbjct: 95  FRDRRAKQIGA-------ELVVGHVEDSIARGTVVLRRETDSRNAAQAVTLLETIERHGY 147

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
             +                I     E         R +        ++ G    V    P
Sbjct: 148 TAMIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHRGEHLRV---FP 204

Query: 172 LMWLKKYETWKLAQD 186
           +    + + W+    
Sbjct: 205 ISNWTELDVWQYIAR 219


>gi|167893236|ref|ZP_02480638.1| sulfate adenylyltransferase subunit 2 [Burkholderia pseudomallei
           7894]
 gi|217419675|ref|ZP_03451181.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei 576]
 gi|217396979|gb|EEC36995.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei 576]
          Length = 321

 Score = 42.2 bits (97), Expect = 0.057,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 51/195 (26%), Gaps = 19/195 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF---------DRVETLSFDYGQRNKVELE 51
           + +++ +     LLFSGG+DS   L  AL  F              +  D G      ++
Sbjct: 35  LRELVAECGKPALLFSGGKDSVVVLHLALKAFGLGANRRTTLPFPLVHIDTGHNYDEVID 94

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
            R    K+I          L   H+      G +     T +         L      G 
Sbjct: 95  FRDRRAKQIGA-------ELVVGHVEDSIARGTVVLRRETDSRNAAQAVTLLETIERHGY 147

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
             +                I     E         R +        ++ G    V    P
Sbjct: 148 TAMIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHRGEHLRV---FP 204

Query: 172 LMWLKKYETWKLAQD 186
           +    + + W+    
Sbjct: 205 ISNWTELDVWQYIAR 219


>gi|332532683|ref|ZP_08408559.1| argininosuccinate synthase [Pseudoalteromonas haloplanktis
          ANT/505]
 gi|332037899|gb|EGI74348.1| argininosuccinate synthase [Pseudoalteromonas haloplanktis
          ANT/505]
          Length = 400

 Score = 42.2 bits (97), Expect = 0.058,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 16/54 (29%), Gaps = 1/54 (1%)

Query: 5  IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          +      +L +SGG D S+       +    V     D GQ  +          
Sbjct: 1  MSSIKKVVLAYSGGLDTSAIVPWLKENYGCEVVAFVADVGQGAEELEGVEAKAI 54


>gi|307710369|ref|ZP_07646810.1| tRNA(Ile)-lysidine synthase [Streptococcus mitis SK564]
 gi|307618961|gb|EFN98096.1| tRNA(Ile)-lysidine synthase [Streptococcus mitis SK564]
          Length = 425

 Score = 42.2 bits (97), Expect = 0.058,   Method: Composition-based stats.
 Identities = 22/173 (12%), Positives = 45/173 (26%), Gaps = 11/173 (6%)

Query: 6   KKAPSALLLFSGGQDSS----TCLSWALDRFDRVETLSFDYGQRNKV-ELECRLCVRKKI 60
           KK    +L  SGG DS        ++  +    +     ++ QR +    E  L      
Sbjct: 17  KKHTKVVLALSGGLDSMFLFKVLSTYQKELEIELILAHVNHKQRIESDWEEKELRKLAAE 76

Query: 61  VELMPKWKDSLGED-----HILPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFVPGRNII 114
             L     +  GE               ++   +  T  V     D+ +    +      
Sbjct: 77  AGLPIYVSNFSGEFSEARARHFRYDFFQEVMKKTGATALVTAHHADDQVETILMRLIRGT 136

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
            L + + +  +  +  I I      +                  N    + + 
Sbjct: 137 RLRYISGIKEKQVVGEIEIIRPFLHFHKKDFPPIFHFEDTSNKENYYFRNRIR 189


>gi|301057224|ref|ZP_07198353.1| PP-loop family protein [delta proteobacterium NaphS2]
 gi|300448675|gb|EFK12311.1| PP-loop family protein [delta proteobacterium NaphS2]
          Length = 266

 Score = 42.2 bits (97), Expect = 0.058,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 61/196 (31%), Gaps = 28/196 (14%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDR------FDRVETLSFDYGQRNKVELECRLCV 56
            +I+     L+  SGG+DS   L    +R        ++  +  D G             
Sbjct: 20  KMIRDGDHVLVAISGGKDSLALLWILRERLKRIPISYQITAVHVDPGFGGNAT------- 72

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
                  +  +  S G D+ +  + +G  +H +          +N     F+  R    L
Sbjct: 73  -----ASIESFLTSNGFDYRIIESDIGPRAHGA----------ENRENPCFLCSRMRRKL 117

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
           +F    A       +     +   + + +  +    +    +       +T+  PL  L 
Sbjct: 118 LFEMADALECNRIALGHHKDDIIETLFLNIFYGASISTMLPVQELFGGKLTLIRPLYLLD 177

Query: 177 KYETWKLAQDIGGQDL 192
           +    +  + +   ++
Sbjct: 178 EDLIRRYGEKMDFPEI 193


>gi|116051794|ref|YP_789364.1| GMP synthase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|122260940|sp|Q02RS2|GUAA_PSEAB RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|115587015|gb|ABJ13030.1| GMP synthase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 525

 Score = 42.2 bits (97), Expect = 0.058,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 54/185 (29%), Gaps = 19/185 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMP 65
           +   LL  SGG DSS   +       D++  +  D G  R     +      + +   + 
Sbjct: 227 SSKVLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRLHEGDQVMAMFAENMGVKVI 286

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +            L  L  ++     + +  +             +++ FL         
Sbjct: 287 RANAEDK-----FLGRLAGVADPEEKRKIIGRTFIEVFDEEATKLQDVKFLAQGTIY--- 338

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                        + +G    +   I++      L  +    +  PL  L K E  K+  
Sbjct: 339 ---------PDVIESAGAKTGKAHVIKSHHNVGGLPEDMQFELVEPLRELFKDEVRKIGL 389

Query: 186 DIGGQ 190
           ++G  
Sbjct: 390 ELGLP 394


>gi|15598964|ref|NP_252458.1| GMP synthase [Pseudomonas aeruginosa PAO1]
 gi|218889947|ref|YP_002438811.1| GMP synthase [Pseudomonas aeruginosa LESB58]
 gi|296387717|ref|ZP_06877192.1| GMP synthase [Pseudomonas aeruginosa PAb1]
 gi|13627134|sp|Q9HXM6|GUAA_PSEAE RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226739703|sp|B7UXJ9|GUAA_PSEA8 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|9949940|gb|AAG07156.1|AE004796_1 GMP synthase [Pseudomonas aeruginosa PAO1]
 gi|218770170|emb|CAW25932.1| GMP synthase [Pseudomonas aeruginosa LESB58]
          Length = 525

 Score = 42.2 bits (97), Expect = 0.058,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 54/185 (29%), Gaps = 19/185 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMP 65
           +   LL  SGG DSS   +       D++  +  D G  R     +      + +   + 
Sbjct: 227 SSKVLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRLHEGDQVMAMFAENMGVKVI 286

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +            L  L  ++     + +  +             +++ FL         
Sbjct: 287 RANAEDK-----FLGRLAGVADPEEKRKIIGRTFIEVFDEEATKLQDVKFLAQGTIY--- 338

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                        + +G    +   I++      L  +    +  PL  L K E  K+  
Sbjct: 339 ---------PDVIESAGAKTGKAHVIKSHHNVGGLPEDMQFELVEPLRELFKDEVRKIGL 389

Query: 186 DIGGQ 190
           ++G  
Sbjct: 390 ELGLP 394


>gi|323357244|ref|YP_004223640.1| GMP synthase, PP-ATPase domain/subunit [Microbacterium testaceum
           StLB037]
 gi|323273615|dbj|BAJ73760.1| GMP synthase, PP-ATPase domain/subunit [Microbacterium testaceum
           StLB037]
          Length = 526

 Score = 42.2 bits (97), Expect = 0.058,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 56/185 (30%), Gaps = 11/185 (5%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +   +   D++  +  D+G   + E E          ++   + 
Sbjct: 223 RVISALSGGVDSAVSTALVHEAVGDQLIAVFVDHGLLRQGERE----------QVENDYV 272

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            S G   I   A    ++  +   +   K +           +    LV  A        
Sbjct: 273 ASTGVKLITVDARETFLNALAGVSDPEQKRKIIGREFIRAFEKVQADLVAEAKAEGEQVR 332

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   +               I++      L  +    +  PL  L K E   + +++G
Sbjct: 333 FLVQGTLYPDVVESGGGTGTANIKSHHNVGGLPEDLQFELVEPLRTLFKDEVRAIGRELG 392

Query: 189 GQDLV 193
             + +
Sbjct: 393 LPEAI 397


>gi|302871600|ref|YP_003840236.1| PP-loop domain protein [Caldicellulosiruptor obsidiansis OB47]
 gi|302574459|gb|ADL42250.1| PP-loop domain protein [Caldicellulosiruptor obsidiansis OB47]
          Length = 268

 Score = 42.2 bits (97), Expect = 0.058,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 5/74 (6%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCL---SWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          + +IIK   S L+ FSGG DS+  L      L   D+V  +        + E E    + 
Sbjct: 14 LKEIIKGYESVLVAFSGGVDSTFLLKVSFDVL--GDKVIAVFSSSVLSPQREKEDAEKIA 71

Query: 58 KKIVELMPKWKDSL 71
          K I   +   +  +
Sbjct: 72 KDIGAKLIVIERDV 85


>gi|159469071|ref|XP_001692691.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158277944|gb|EDP03710.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 365

 Score = 42.2 bits (97), Expect = 0.058,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 36/119 (30%), Gaps = 1/119 (0%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +L SGG DSS  L   +     V         +         C  ++ +E   K  +
Sbjct: 6   RVAVLLSGGVDSSLALRLLVAAGHDVTAFYLQIWFQEDFRNFWDACPWEEDLEYARKVCE 65

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +LG    + + +        +  +VA                 + F  F   LA R G 
Sbjct: 66  ALGVKLEV-VPLTTQYWDRVVASSVAEIRAGRTPNPDIWCNSRVKFGAFYDHLAQRHGA 123


>gi|85726177|gb|ABC79611.1| GMP synthase [Borrelia hermsii DAH]
          Length = 517

 Score = 42.2 bits (97), Expect = 0.058,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 63/194 (32%), Gaps = 24/194 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DS  C        +  +  +  D G   K E        ++I+EL  ++
Sbjct: 221 KKVILGLSGGTDSLVCALLVNKAIESNLICIFIDTGLLRKNE-------AREILELNRQY 273

Query: 68  KDSL--GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             ++   +   + L  L +I      + +  K          +  +++ FL      +  
Sbjct: 274 NLNIKHVDSSSIFLNNLKNIDDPEEKRKIIGKTFIEVFEKIALEDKDVEFLAQGTIYSDV 333

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +                  D     I++      L  +  + +  PL  L K E  +L  
Sbjct: 334 IE------------SESRNDVFSSHIKSHHNVGGLPGKIKLKLLEPLRELFKDEVIQLGI 381

Query: 186 DIGGQDLVNLILEE 199
            +G  +  +++   
Sbjct: 382 QLGIAE--DVLYRH 393


>gi|4321715|gb|AAD15805.1| GMP synthase [Lactococcus lactis subsp. cremoris MG1363]
          Length = 513

 Score = 42.2 bits (97), Expect = 0.058,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 51/186 (27%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++ ++  D+G   K E      V + +       
Sbjct: 219 KKVLLGLSGGVDSSVVGVLLQRAIGDQLTSIFVDHGFLRKGE---ADQVMETLGGKFGLN 275

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         ++G                            N    VF        G
Sbjct: 276 IIKVDAQKRFMDKLVGLSD----------------PETQRKIIGNEFVYVFDDEANKLEG 319

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L   +
Sbjct: 320 VDFLAQGTLYTDVIESGTDTAQTIKSHHNVGGLPEDMQFQLIEPLNTLFKDEVRALGTQL 379

Query: 188 GGQDLV 193
           G  D +
Sbjct: 380 GMPDEI 385


>gi|15642240|ref|NP_231873.1| mesJ protein [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|153820829|ref|ZP_01973496.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae B33]
 gi|229512122|ref|ZP_04401601.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae B33]
 gi|229519257|ref|ZP_04408700.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae RC9]
 gi|229607187|ref|YP_002877835.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae MJ-1236]
 gi|254849373|ref|ZP_05238723.1| tRNA(Ile)-lysidine synthase [Vibrio cholerae MO10]
 gi|255747060|ref|ZP_05421005.1| tRNA(Ile)-lysidine synthetase [Vibrio cholera CIRS 101]
 gi|262161395|ref|ZP_06030505.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae INDRE 91/1]
 gi|61217424|sp|Q9KPX0|TILS_VIBCH RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
          Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
          Full=tRNA(Ile)-lysidine synthetase
 gi|9656802|gb|AAF95386.1| mesJ protein [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|126521621|gb|EAZ78844.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae B33]
 gi|229343946|gb|EEO08921.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae RC9]
 gi|229352087|gb|EEO17028.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae B33]
 gi|229369842|gb|ACQ60265.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae MJ-1236]
 gi|254845078|gb|EET23492.1| tRNA(Ile)-lysidine synthase [Vibrio cholerae MO10]
 gi|255735462|gb|EET90862.1| tRNA(Ile)-lysidine synthetase [Vibrio cholera CIRS 101]
 gi|262028706|gb|EEY47360.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae INDRE 91/1]
          Length = 440

 Score = 42.2 bits (97), Expect = 0.058,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 17/52 (32%), Gaps = 4/52 (7%)

Query: 10 SALLLFSGGQDSSTCLSWALDR----FDRVETLSFDYGQRNKVELECRLCVR 57
            LL  SGG DS   L+            V  +   +G     +   + C R
Sbjct: 19 KILLALSGGVDSQVLLALLARGRDEFGWDVTAVHVHHGLSPNADQWAQYCQR 70


>gi|323142835|ref|ZP_08077547.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Succinatimonas hippei YIT 12066]
 gi|322417377|gb|EFY07999.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Succinatimonas hippei YIT 12066]
          Length = 374

 Score = 42.2 bits (97), Expect = 0.059,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 24/84 (28%), Gaps = 8/84 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSF--------DYGQRNKVELECRLCVRKKIVE 62
            ++  SGG DSS   +   +   +V  L          D       + E    V  K+  
Sbjct: 17  VVIGLSGGVDSSLSAALLKENGMKVTALFMKNWEEDDTDTVCAAAADREDAQKVCDKLGI 76

Query: 63  LMPKWKDSLGEDHILPLAILGDIS 86
            +     +      +    L +  
Sbjct: 77  ELKTINFAAEYWDRVFENFLSEYQ 100


>gi|315640422|ref|ZP_07895532.1| argininosuccinate synthase [Enterococcus italicus DSM 15952]
 gi|315483782|gb|EFU74268.1| argininosuccinate synthase [Enterococcus italicus DSM 15952]
          Length = 405

 Score = 42.2 bits (97), Expect = 0.059,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 30/89 (33%), Gaps = 3/89 (3%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L +SGG D+S  + W +D    V     D G   +      +  +  +V     
Sbjct: 1  MKEKVILAYSGGLDTSVSIKWLVDEGYDVVACCLDIG---EGRDTAAIKEKALLVGASES 57

Query: 67 WKDSLGEDHILPLAILGDISHSSLTKNVA 95
          +     E+     A++    ++    +  
Sbjct: 58 YAIDAREEFADDFALIALQGNTFYENSYP 86


>gi|299769135|ref|YP_003731161.1| MJ0570-related uncharacterized domain protein [Acinetobacter sp.
           DR1]
 gi|298699223|gb|ADI89788.1| MJ0570-related uncharacterized domain protein [Acinetobacter sp.
           DR1]
          Length = 228

 Score = 42.2 bits (97), Expect = 0.059,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 44/121 (36%), Gaps = 9/121 (7%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQR---NKVELECRLCVRKKIV 61
             ++++ FSGG+DSS  L  A+     V  L     + GQR   + + L+      + I 
Sbjct: 11  NKTSIVSFSGGKDSSLALYHAMQTG-TVNGLIVMLEEQGQRSRSHAMPLDIIQAQAEAIG 69

Query: 62  --ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
               M     +  E   + L I      + +     + + ++   +  +  +  + L   
Sbjct: 70  LPVFMASSSWNDYEAKFIELLIQAKQQGAEVLVTGDLDMPEHGCWHDRITQQVGLKLGMP 129

Query: 120 A 120
            
Sbjct: 130 L 130


>gi|188582356|ref|YP_001925801.1| GMP synthase [Methylobacterium populi BJ001]
 gi|179345854|gb|ACB81266.1| GMP synthase, large subunit [Methylobacterium populi BJ001]
          Length = 521

 Score = 42.2 bits (97), Expect = 0.059,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 54/185 (29%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS       +   D++  +  D+G     E E  + + +        
Sbjct: 223 TEKVICGLSGGVDSSVAAVLIHEAIGDQLTCVFVDHGLMRLGEGEEVVRLFR-------- 274

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + + +PL  +                +        +              A  L
Sbjct: 275 ------DHYNIPLVHVEAQDLFIGALEGVDDPEVKRKTIGRLFIDVFEAEAKKIGGAAFL 328

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+    +      TI++      L    ++ +  PL  L K E   L ++
Sbjct: 329 AQGTLYPDVIESV--SFSGGPSVTIKSHHNVGGLPERMNMRLVEPLRELFKDEVRLLGKE 386

Query: 187 IGGQD 191
           +G  +
Sbjct: 387 LGLPE 391


>gi|116492215|ref|YP_803950.1| GMP synthase [Pediococcus pentosaceus ATCC 25745]
 gi|122266321|sp|Q03H14|GUAA_PEDPA RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|116102365|gb|ABJ67508.1| GMP synthase (glutamine-hydrolyzing) [Pediococcus pentosaceus ATCC
           25745]
          Length = 517

 Score = 42.2 bits (97), Expect = 0.059,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 62/204 (30%), Gaps = 30/204 (14%)

Query: 1   MNDIIKKA----------PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVE 49
           MND I                LL  SGG DSS           D++  +  D+G   K E
Sbjct: 205 MNDFIDMQVQQIRETVGDRKVLLGLSGGVDSSVVGVLLNKAIGDQLVCIFVDHGLLRKGE 264

Query: 50  LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
                   K++++ +                 L  ++  S  +     I +  +      
Sbjct: 265 -------AKQVMDSLEGKFGLNIIKVDAQDRFLSKLAGVSEPEQKRKIIGNEFIQVFNDE 317

Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
            + +             GI  +  G   TD          TI++      L  + H  + 
Sbjct: 318 AQKL------------KGIDFLAQGTLYTDVIESGTDTAQTIKSHHNVGGLPEDMHFELI 365

Query: 170 TPLMWLKKYETWKLAQDIGGQDLV 193
            PL  L K E   L + +G  + +
Sbjct: 366 EPLRTLFKDEARDLGEKLGMPEDL 389


>gi|92112713|ref|YP_572641.1| tRNA(Ile)-lysidine synthetase-like protein [Chromohalobacter
          salexigens DSM 3043]
 gi|91795803|gb|ABE57942.1| tRNA(Ile)-lysidine synthetase-like protein [Chromohalobacter
          salexigens DSM 3043]
          Length = 430

 Score = 42.2 bits (97), Expect = 0.059,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 25/64 (39%), Gaps = 7/64 (10%)

Query: 5  IKKAPSAL-LLFSGGQDSSTCLSWALDRFDR----VETLSFDYG-QRNKVELEC-RLCVR 57
          +      + +  SGG DSS  L+ A+    R    +  +  ++G Q    + E     + 
Sbjct: 21 MTSPGRCVWVALSGGLDSSLLLTLAVAACRRHPRPLYAVHVNHGLQDAAADFEAHARWLC 80

Query: 58 KKIV 61
           ++ 
Sbjct: 81 GRLG 84


>gi|89255998|ref|YP_513360.1| asparagine synthase [Francisella tularensis subsp. holarctica LVS]
 gi|115314478|ref|YP_763201.1| asparagine synthase (glutamine-hydrolyzing) [Francisella tularensis
           subsp. holarctica OSU18]
 gi|156502001|ref|YP_001428066.1| asparagine synthase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|254367347|ref|ZP_04983373.1| asparagine synthase [Francisella tularensis subsp. holarctica 257]
 gi|254368830|ref|ZP_04984843.1| asparagine synthase [Francisella tularensis subsp. holarctica
           FSC022]
 gi|290953232|ref|ZP_06557853.1| asparagine synthase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295313545|ref|ZP_06804135.1| asparagine synthase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|89143829|emb|CAJ79040.1| asparagine synthase [Francisella tularensis subsp. holarctica LVS]
 gi|115129377|gb|ABI82564.1| asparagine synthase (glutamine-hydrolyzing) [Francisella tularensis
           subsp. holarctica OSU18]
 gi|134253163|gb|EBA52257.1| asparagine synthase [Francisella tularensis subsp. holarctica 257]
 gi|156252604|gb|ABU61110.1| asparagine synthase (glutamine-hydrolyzing) [Francisella tularensis
           subsp. holarctica FTNF002-00]
 gi|157121751|gb|EDO65921.1| asparagine synthase [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 628

 Score = 42.2 bits (97), Expect = 0.059,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 15  FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
            SGG DS+T ++       D++ T S  + Q+   E E    V K I 
Sbjct: 271 LSGGIDSTTVIALMQSMSKDKINTFSIGFNQKEYNEAEHARAVAKHIG 318


>gi|88799912|ref|ZP_01115484.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Reinekea sp. MED297]
 gi|88777343|gb|EAR08546.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Reinekea sp. MED297]
          Length = 525

 Score = 42.2 bits (97), Expect = 0.059,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 55/181 (30%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           +LL  SGG DSS   +       D++  +  D G   K E +    V     E M     
Sbjct: 230 VLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRKDEGD---QVMAMFAENMGVRVI 286

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
               +    L  L  +S     + +                +++ FL             
Sbjct: 287 RADAEDRF-LNALKGVSDPEEKRKIIGHQFIEVFDEQAHSIQDVDFLAQGTIY------- 338

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                    + +     +   I++      L  E  +++  PL  L K E  K+  ++G 
Sbjct: 339 -----PDVIESAASKTGKAHVIKSHHNVGGLPEEMKLSLVEPLRELFKDEVRKIGLELGL 393

Query: 190 Q 190
            
Sbjct: 394 P 394


>gi|322377896|ref|ZP_08052384.1| tRNA(Ile)-lysidine synthetase [Streptococcus sp. M334]
 gi|321281072|gb|EFX58084.1| tRNA(Ile)-lysidine synthetase [Streptococcus sp. M334]
          Length = 425

 Score = 42.2 bits (97), Expect = 0.059,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 48/174 (27%), Gaps = 13/174 (7%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRF-----DRVETLSFDYGQRNKV-ELECRLCVRKK 59
           KK    +L  SGG DS   L   L  +       +     ++ QR +    E  L     
Sbjct: 17  KKHTKVVLALSGGLDSMF-LFKVLSTYQEELEIELILAHVNHKQRVESDWEEKELRKLAA 75

Query: 60  IVELMPKWKDSLGED-----HILPLAILGDIS-HSSLTKNVAMKIQDNNLPNTFVPGRNI 113
             EL     +  GE               ++   +  T  V     D+ +    +     
Sbjct: 76  EAELPIYISNFSGEFSEARARDFRYDFFQEVMKKTGATALVTAHHADDQVETILMRLIRG 135

Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT 167
             L + + +  +  + +I +      +             I    N    + + 
Sbjct: 136 TRLRYLSGIKEKQVVGDIEMIRPFLQFHKKDFPSIFHFEDISNQENHYFRNRIR 189


>gi|320167761|gb|EFW44660.1| asparagine synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 552

 Score = 42.2 bits (97), Expect = 0.059,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 50/182 (27%), Gaps = 17/182 (9%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVE----------------TLSFDYGQRNKVELECRLCV 56
           +L SGG DSS   + A    +++                   SF  G +N  +LE    V
Sbjct: 230 VLLSGGLDSSLVAAIASRHLEQLANNPPANDESHVNWWPRLHSFAIGLKNAPDLEAARVV 289

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
            K +  +  ++  ++ + H   L  + +   +     +        L          + L
Sbjct: 290 AKHLNTVHHEFHFTIQDGH-DALRDVVNHLETYDVTTIRASTPMYLLSRRIKATGVKMVL 348

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
               +     G           D       R   +   +            V   + +L 
Sbjct: 349 SGEGSDEIFGGYLYFHKAPSAADLHKETIQRVGNLHLSDCLRANKSTMAWGVEARVPFLD 408

Query: 177 KY 178
           K 
Sbjct: 409 KA 410


>gi|301162414|emb|CBW21959.1| putative ATP-binding PP-loop protein [Bacteroides fragilis 638R]
          Length = 435

 Score = 42.2 bits (97), Expect = 0.059,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 18/62 (29%), Gaps = 1/62 (1%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              L+  SGG DS   L   L      E    ++  R   E +      +++       
Sbjct: 19 NDKVLVTLSGGTDSVALLRLLLSMGYTCEAAHCNFHLR-DKESDRDEAFVRRLCHESGVL 77

Query: 68 KD 69
            
Sbjct: 78 LH 79


>gi|251788758|ref|YP_003003479.1| GMP synthase, large subunit [Dickeya zeae Ech1591]
 gi|247537379|gb|ACT06000.1| GMP synthase, large subunit [Dickeya zeae Ech1591]
          Length = 525

 Score = 42.2 bits (97), Expect = 0.059,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 50/184 (27%), Gaps = 17/184 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS           DR+  +  D G    + L     V +   +    
Sbjct: 227 KDKVILGLSGGVDSSVTALLLHRAIGDRLTCVFVDNG---LLRLNEAEQVMEMFGDQFGL 283

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +  ++    A+ G     +  K +     +                          
Sbjct: 284 NIVHVQAENRFLSALAGIDDPEAKRKTIGRVFVEVFDEEAGKLTDVKWLAQGT------- 336

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                 I     + +     +   I++      L  +  + +  PL  L K E  K+  +
Sbjct: 337 ------IYPDVIESAASATGKAHVIKSHHNVGGLPDDMALGLVEPLKELFKDEVRKIGLE 390

Query: 187 IGGQ 190
           +G  
Sbjct: 391 LGLP 394


>gi|238924819|ref|YP_002938335.1| sulfate adenylyltransferase subunit 2 [Eubacterium rectale ATCC
           33656]
 gi|238876494|gb|ACR76201.1| sulfate adenylyltransferase subunit 2 [Eubacterium rectale ATCC
           33656]
          Length = 303

 Score = 42.2 bits (97), Expect = 0.059,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 56/183 (30%), Gaps = 16/183 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRK-KIVEL 63
              ++L+S G+DSS  L  A+  F         L  +   +    +E R  + K K +E+
Sbjct: 30  EKPVMLYSIGKDSSVMLHLAMKAFYPEKPPFPFLHVNTTWKFHEMIEFRDRIAKEKGIEM 89

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +        +  I P       +    T+ +   +        F  GR            
Sbjct: 90  LEYINQDGVKQGINPFDHGSAYTDIMKTQALKQALDKYGFTAAFGGGRRD--------EE 141

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
                  I     E       + R +  +   + I  G E  V    PL    + + W+ 
Sbjct: 142 KSRAKERIFSFRNENHAWDPKNQRPEMWKLYNSRIKKGQEVRV---FPLSNWTEKDIWQY 198

Query: 184 AQD 186
            + 
Sbjct: 199 IKR 201


>gi|167821717|ref|ZP_02453397.1| sulfate adenylyltransferase subunit 2 [Burkholderia pseudomallei
           91]
          Length = 249

 Score = 42.2 bits (97), Expect = 0.059,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 51/195 (26%), Gaps = 19/195 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF---------DRVETLSFDYGQRNKVELE 51
           + +++ +     LLFSGG+DS   L  AL  F              +  D G      ++
Sbjct: 22  LRELVAECSKPALLFSGGKDSVVVLHLALKAFGLGANRRTTLPFPLVHIDTGHNYDEVID 81

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
            R    K+I          L   H+      G +     T +         L      G 
Sbjct: 82  FRDRRAKQIGA-------ELVVGHVEDSIARGTVVLRRETDSRNAAQAVTLLETIERHGY 134

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
             +                I     E         R +        ++ G    V    P
Sbjct: 135 TAMIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHRGEHLRV---FP 191

Query: 172 LMWLKKYETWKLAQD 186
           +    + + W+    
Sbjct: 192 ISNWTELDVWQYIAR 206


>gi|167718517|ref|ZP_02401753.1| sulfate adenylyltransferase subunit 2 [Burkholderia pseudomallei
           DM98]
          Length = 308

 Score = 42.2 bits (97), Expect = 0.059,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 51/195 (26%), Gaps = 19/195 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF---------DRVETLSFDYGQRNKVELE 51
           + +++ +     LLFSGG+DS   L  AL  F              +  D G      ++
Sbjct: 22  LRELVAECSKPALLFSGGKDSVVVLHLALKAFGLGANRRTTLPFPLVHIDTGHNYDEVID 81

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
            R    K+I          L   H+      G +     T +         L      G 
Sbjct: 82  FRDRRAKQIGA-------ELVVGHVEDSIARGTVVLRRETDSRNAAQAVTLLETIERHGY 134

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
             +                I     E         R +        ++ G    V    P
Sbjct: 135 TAMIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHRGEHLRV---FP 191

Query: 172 LMWLKKYETWKLAQD 186
           +    + + W+    
Sbjct: 192 ISNWTELDVWQYIAR 206


>gi|124384598|ref|YP_001029129.1| sulfate adenylyltransferase subunit 2 [Burkholderia mallei NCTC
           10229]
 gi|254198320|ref|ZP_04904742.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei S13]
 gi|124292618|gb|ABN01887.1| sulfate adenylyltransferase, subunit 2 [Burkholderia mallei NCTC
           10229]
 gi|169655061|gb|EDS87754.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei S13]
          Length = 376

 Score = 42.2 bits (97), Expect = 0.059,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 51/195 (26%), Gaps = 19/195 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF---------DRVETLSFDYGQRNKVELE 51
           + +++ +     LLFSGG+DS   L  AL  F              +  D G      ++
Sbjct: 90  LRELVAECSKPALLFSGGKDSVVVLHLALKAFGLGANRRTTLPFPLVHIDTGHNYDEVID 149

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
            R    K+I          L   H+      G +     T +         L      G 
Sbjct: 150 FRDRRAKQIGA-------ELVVGHVEDSIARGTVVLRRETDSRNAAQAVTLLETIERHGY 202

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
             +                I     E         R +        ++ G    V    P
Sbjct: 203 TAMIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHRGEHLRV---FP 259

Query: 172 LMWLKKYETWKLAQD 186
           +    + + W+    
Sbjct: 260 ISNWTELDVWQYIAR 274


>gi|146299262|ref|YP_001193853.1| sulfate adenylyltransferase subunit 2 [Flavobacterium johnsoniae
           UW101]
 gi|146153680|gb|ABQ04534.1| sulfate adenylyltransferase subunit 2 [Flavobacterium johnsoniae
           UW101]
          Length = 299

 Score = 42.2 bits (97), Expect = 0.059,   Method: Composition-based stats.
 Identities = 27/208 (12%), Positives = 62/208 (29%), Gaps = 8/208 (3%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVR 57
            ++I +    +LLFSGG+DS T +  A   F         L  D G      +  R  + 
Sbjct: 19  REVISQFDKPVLLFSGGKDSITLVRLAQKAFFPAKIPFPLLHVDTGHNFPETIAFRDKLV 78

Query: 58  KKIV--ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF-VPGRNII 114
           +++    ++   +D++ E  ++         +S  T  +   I++           R+  
Sbjct: 79  EELGLELIVRNVQDAIDEGKVVEETGKYSSRNSLQTTTLLDAIEEFKFDACIGGARRDEE 138

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
                  +              +                      +   + + V +  + 
Sbjct: 139 KARAKERIFSVRDDFGQWDEKNQRPELFDILNGKIENGQNVRVFPISNWTELDVWSY-IE 197

Query: 175 LKKYETWKLAQDIGGQDLVNLILEESHT 202
            +  E   +      +  +   L  SH+
Sbjct: 198 KENIEIPSIYFSHKRKVFLRDGLIWSHS 225


>gi|53804114|ref|YP_114243.1| tRNA(Ile)-lysidine synthetase [Methylococcus capsulatus str.
          Bath]
 gi|61216455|sp|Q607F5|TILS_METCA RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
          Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
          Full=tRNA(Ile)-lysidine synthetase
 gi|53757875|gb|AAU92166.1| tRNA(Ile)-lysidine synthetase [Methylococcus capsulatus str.
          Bath]
          Length = 439

 Score = 42.2 bits (97), Expect = 0.059,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 18/49 (36%), Gaps = 4/49 (8%)

Query: 13 LLFSGGQDSSTCLSWALD----RFDRVETLSFDYGQRNKVELECRLCVR 57
          + FSGG DS+  L             V  +   +G + + +   R C  
Sbjct: 20 VAFSGGLDSAVLLDLMCQVRRVSGIGVRAIHVHHGIQPEADAWSRHCAA 68


>gi|53719826|ref|YP_108812.1| sulfate adenylyltransferase subunit 2 [Burkholderia pseudomallei
           K96243]
 gi|53724142|ref|YP_103257.1| sulfate adenylyltransferase subunit 2 [Burkholderia mallei ATCC
           23344]
 gi|121598336|ref|YP_993438.1| sulfate adenylyltransferase subunit 2 [Burkholderia mallei SAVP1]
 gi|126448464|ref|YP_001080947.1| sulfate adenylyltransferase subunit 2 [Burkholderia mallei NCTC
           10247]
 gi|126452905|ref|YP_001066817.1| sulfate adenylyltransferase subunit 2 [Burkholderia pseudomallei
           1106a]
 gi|162210043|ref|YP_334036.2| sulfate adenylyltransferase subunit 2 [Burkholderia pseudomallei
           1710b]
 gi|254191481|ref|ZP_04897985.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254200205|ref|ZP_04906571.1| sulfate adenylyltransferase, subunit 2 [Burkholderia mallei FMH]
 gi|254209285|ref|ZP_04915631.1| sulfate adenylyltransferase, subunit 2 [Burkholderia mallei JHU]
 gi|254297148|ref|ZP_04964601.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei 406e]
 gi|254358043|ref|ZP_04974316.1| sulfate adenylyltransferase, subunit 2 [Burkholderia mallei
           2002721280]
 gi|52210240|emb|CAH36219.1| putative sulfate adenylyltransferase [Burkholderia pseudomallei
           K96243]
 gi|52427565|gb|AAU48158.1| sulfate adenylyltransferase, subunit 2 [Burkholderia mallei ATCC
           23344]
 gi|121227146|gb|ABM49664.1| sulfate adenylyltransferase, subunit 2 [Burkholderia mallei SAVP1]
 gi|126226547|gb|ABN90087.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei 1106a]
 gi|126241334|gb|ABO04427.1| sulfate adenylyltransferase, subunit 2 [Burkholderia mallei NCTC
           10247]
 gi|147749801|gb|EDK56875.1| sulfate adenylyltransferase, subunit 2 [Burkholderia mallei FMH]
 gi|147750058|gb|EDK57129.1| sulfate adenylyltransferase, subunit 2 [Burkholderia mallei JHU]
 gi|148027170|gb|EDK85191.1| sulfate adenylyltransferase, subunit 2 [Burkholderia mallei
           2002721280]
 gi|157807804|gb|EDO84974.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei 406e]
 gi|157939153|gb|EDO94823.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei Pasteur 52237]
          Length = 321

 Score = 42.2 bits (97), Expect = 0.059,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 51/195 (26%), Gaps = 19/195 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF---------DRVETLSFDYGQRNKVELE 51
           + +++ +     LLFSGG+DS   L  AL  F              +  D G      ++
Sbjct: 35  LRELVAECSKPALLFSGGKDSVVVLHLALKAFGLGANRRTTLPFPLVHIDTGHNYDEVID 94

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
            R    K+I          L   H+      G +     T +         L      G 
Sbjct: 95  FRDRRAKQIGA-------ELVVGHVEDSIARGTVVLRRETDSRNAAQAVTLLETIERHGY 147

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
             +                I     E         R +        ++ G    V    P
Sbjct: 148 TAMIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHRGEHLRV---FP 204

Query: 172 LMWLKKYETWKLAQD 186
           +    + + W+    
Sbjct: 205 ISNWTELDVWQYIAR 219


>gi|53718601|ref|YP_107587.1| sulfate adenylyltransferase subunit 2 [Burkholderia pseudomallei
           K96243]
 gi|53725616|ref|YP_102441.1| sulfate adenylyltransferase subunit 2 [Burkholderia mallei ATCC
           23344]
 gi|76808906|ref|YP_332580.1| sulfate adenylyltransferase subunit 2 [Burkholderia pseudomallei
           1710b]
 gi|121599210|ref|YP_993654.1| sulfate adenylyltransferase subunit 2 [Burkholderia mallei SAVP1]
 gi|124383748|ref|YP_001028884.1| sulfate adenylyltransferase subunit 2 [Burkholderia mallei NCTC
           10229]
 gi|126450617|ref|YP_001081203.1| sulfate adenylyltransferase subunit 2 [Burkholderia mallei NCTC
           10247]
 gi|126453969|ref|YP_001065296.1| sulfate adenylyltransferase subunit 2 [Burkholderia pseudomallei
           1106a]
 gi|134281082|ref|ZP_01767791.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei 305]
 gi|167003634|ref|ZP_02269420.1| sulfate adenylyltransferase, subunit 2 [Burkholderia mallei PRL-20]
 gi|226194366|ref|ZP_03789964.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei Pakistan 9]
 gi|237811276|ref|YP_002895727.1| sulfate adenylyltransferase subunit 2 [Burkholderia pseudomallei
           MSHR346]
 gi|238562987|ref|ZP_00439604.2| sulfate adenylyltransferase subunit 2 [Burkholderia mallei GB8
           horse 4]
 gi|242316685|ref|ZP_04815701.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei 1106b]
 gi|254178705|ref|ZP_04885360.1| sulfate adenylyltransferase, subunit 2 [Burkholderia mallei ATCC
           10399]
 gi|254181445|ref|ZP_04888042.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei 1655]
 gi|254190844|ref|ZP_04897351.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254196670|ref|ZP_04903094.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei S13]
 gi|254199343|ref|ZP_04905709.1| sulfate adenylyltransferase, subunit 2 [Burkholderia mallei FMH]
 gi|254205659|ref|ZP_04912011.1| sulfate adenylyltransferase, subunit 2 [Burkholderia mallei JHU]
 gi|254258635|ref|ZP_04949689.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei 1710a]
 gi|254357817|ref|ZP_04974090.1| sulfate adenylyltransferase, subunit 2 [Burkholderia mallei
           2002721280]
 gi|52209015|emb|CAH34955.1| putative sulfate adenylyltransferase subunit 2 [Burkholderia
           pseudomallei K96243]
 gi|52429039|gb|AAU49632.1| sulfate adenylyltransferase, subunit 2 [Burkholderia mallei ATCC
           23344]
 gi|76578359|gb|ABA47834.1| sulfate adenylyltransferase, subunit 2 [Burkholderia pseudomallei
           1710b]
 gi|121228020|gb|ABM50538.1| sulfate adenylyltransferase, subunit 2 [Burkholderia mallei SAVP1]
 gi|124291768|gb|ABN01037.1| sulfate adenylyltransferase, subunit 2 [Burkholderia mallei NCTC
           10229]
 gi|126227611|gb|ABN91151.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei 1106a]
 gi|126243487|gb|ABO06580.1| sulfate adenylyltransferase, subunit 2 [Burkholderia mallei NCTC
           10247]
 gi|134247388|gb|EBA47473.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei 305]
 gi|147748939|gb|EDK56013.1| sulfate adenylyltransferase, subunit 2 [Burkholderia mallei FMH]
 gi|147753102|gb|EDK60167.1| sulfate adenylyltransferase, subunit 2 [Burkholderia mallei JHU]
 gi|148026944|gb|EDK84965.1| sulfate adenylyltransferase, subunit 2 [Burkholderia mallei
           2002721280]
 gi|157938519|gb|EDO94189.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei Pasteur 52237]
 gi|160699744|gb|EDP89714.1| sulfate adenylyltransferase, subunit 2 [Burkholderia mallei ATCC
           10399]
 gi|169653413|gb|EDS86106.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei S13]
 gi|184211983|gb|EDU09026.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei 1655]
 gi|225933451|gb|EEH29440.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei Pakistan 9]
 gi|237505904|gb|ACQ98222.1| sulfate adenylyltransferase subunit 2 [Burkholderia pseudomallei
           MSHR346]
 gi|238521605|gb|EEP85055.1| sulfate adenylyltransferase subunit 2 [Burkholderia mallei GB8
           horse 4]
 gi|242139924|gb|EES26326.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei 1106b]
 gi|243060860|gb|EES43046.1| sulfate adenylyltransferase, subunit 2 [Burkholderia mallei PRL-20]
 gi|254217324|gb|EET06708.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei 1710a]
          Length = 321

 Score = 42.2 bits (97), Expect = 0.059,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 51/195 (26%), Gaps = 19/195 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF---------DRVETLSFDYGQRNKVELE 51
           + +++ +     LLFSGG+DS   L  AL  F              +  D G      ++
Sbjct: 35  LRELVAECSKPALLFSGGKDSVVVLHLALKAFGLGANRRTTLPFPLVHIDTGHNYDEVID 94

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
            R    K+I          L   H+      G +     T +         L      G 
Sbjct: 95  FRDRRAKQIGA-------ELVVGHVEDSIARGTVVLRRETDSRNAAQAVTLLETIERHGY 147

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
             +                I     E         R +        ++ G    V    P
Sbjct: 148 TAMIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHRGEHLRV---FP 204

Query: 172 LMWLKKYETWKLAQD 186
           +    + + W+    
Sbjct: 205 ISNWTELDVWQYIAR 219


>gi|14520709|ref|NP_126184.1| hypothetical protein PAB2029 [Pyrococcus abyssi GE5]
 gi|5457925|emb|CAB49415.1| Predicted ATPase of the PP-loop superfamily [Pyrococcus abyssi GE5]
          Length = 323

 Score = 42.2 bits (97), Expect = 0.059,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 27/83 (32%), Gaps = 6/83 (7%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSW---ALDRF-DRVETLSFDYGQR--NKVELECRLC 55
             +IKK     +  SGG+DS   L        RF   +  ++ D G +      +E    
Sbjct: 41  YRMIKKGERIGVAVSGGKDSVVLLHLLAKLRKRFPFEIVAITIDEGIKGYRDKSVEVAKR 100

Query: 56  VRKKIVELMPKWKDSLGEDHILP 78
             + +      ++        L 
Sbjct: 101 NAELLGVEHHIYRFKDYIGFTLD 123


>gi|331270070|ref|YP_004396562.1| argininosuccinate synthase [Clostridium botulinum BKT015925]
 gi|329126620|gb|AEB76565.1| argininosuccinate synthase [Clostridium botulinum BKT015925]
          Length = 402

 Score = 42.2 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 38/133 (28%), Gaps = 14/133 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L +SGG D+S  + W  + ++  V     + GQ      E    + KK +    
Sbjct: 1   MKEKVVLAYSGGLDTSITIHWLKENYNLEVIACCVNVGQ-----DEDFDEIEKKAI---- 51

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 G   I    +  +     + K V                   +       +A++
Sbjct: 52  ----KSGASKIYIEDVTSEFVSEYIYKGVKANAMYEGKYLLGTSFARPLIAKKLVEVAHK 107

Query: 126 LGITNIVIGVCET 138
            G   I  G    
Sbjct: 108 EGAKYICHGCTGK 120


>gi|323170980|gb|EFZ56629.1| tRNA(Ile)-lysidine synthase [Escherichia coli LT-68]
          Length = 432

 Score = 42.2 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 5/60 (8%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYGQRNKVELECRLC 55
          +N  +  +   L+ FSGG DS+  L   +          +  +   +G     +   R C
Sbjct: 5  LNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHGLSANADAWVRHC 64


>gi|301025926|ref|ZP_07189412.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 69-1]
 gi|300395781|gb|EFJ79319.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 69-1]
          Length = 432

 Score = 42.2 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 5/60 (8%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYGQRNKVELECRLC 55
          +N  +  +   L+ FSGG DS+  L   +          +  +   +G     +   R C
Sbjct: 5  LNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHGLSANADAWVRHC 64


>gi|242069635|ref|XP_002450094.1| hypothetical protein SORBIDRAFT_05g000440 [Sorghum bicolor]
 gi|241935937|gb|EES09082.1| hypothetical protein SORBIDRAFT_05g000440 [Sorghum bicolor]
          Length = 584

 Score = 42.2 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 21/182 (11%), Positives = 43/182 (23%), Gaps = 10/182 (5%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETL--------SFDYGQRNKVELECRLCVRKKIVELM 64
           +L SGG DSS   + A+      E          SF  G     +L+    V   +  L 
Sbjct: 242 VLLSGGLDSSLVAAVAVRHLAETEAATRWGTKLHSFCVGLEGSPDLKAAREVADYLGTLH 301

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            ++     +D I  +  +   + +     +        +          + +    +   
Sbjct: 302 HEF-HFTVQDGIDAIEDVIYHTETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSD-E 359

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G           +      CR          +     +        +        K  
Sbjct: 360 LFGGYLYFHKAPNKEEFHQETCRKVKALHQYDCLRANKATSAWGLEARVRPDLGRIEKWV 419

Query: 185 QD 186
             
Sbjct: 420 LR 421


>gi|260943125|ref|XP_002615861.1| hypothetical protein CLUG_04743 [Clavispora lusitaniae ATCC 42720]
 gi|238851151|gb|EEQ40615.1| hypothetical protein CLUG_04743 [Clavispora lusitaniae ATCC 42720]
          Length = 463

 Score = 42.2 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 60/202 (29%), Gaps = 23/202 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFD------RVETLSFDYGQRNKVELECRLCVRKKIV 61
               L+  SGG DS       L           + T++ D+G R    LE       ++ 
Sbjct: 20  PGKLLVALSGGVDSMCLTHLLLQYKKLYDPKLEIHTMTIDHGYRKMSSLE-----AHEVG 74

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
            ++  W       +I  L+   + S  +  + VA  ++ N              L     
Sbjct: 75  RIVQSWGAH---HYIHRLSYDRNPSSITNFEEVARTMRYNAFERQCDELGIQALL----- 126

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           LA+ L              S          RA    I+      ++V  PL+   K    
Sbjct: 127 LAHNLNDRIETFLQRLQMNSTLYGLGGLKPRATM-PISSKSPQQISVFRPLLQFDKQSLR 185

Query: 182 KLAQDIGG---QDLVNLILEES 200
           +     G    +D  N  L  +
Sbjct: 186 ETCVKSGVLWFEDHTNADLHLT 207


>gi|258405849|ref|YP_003198591.1| argininosuccinate synthase [Desulfohalobium retbaense DSM 5692]
 gi|257798076|gb|ACV69013.1| argininosuccinate synthase [Desulfohalobium retbaense DSM 5692]
          Length = 407

 Score = 42.2 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 10 SALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQ 44
            +L +SGG D+S  L W        V TL+ D GQ
Sbjct: 8  KVVLAYSGGLDTSIILKWIKKTYGCEVITLTADLGQ 43


>gi|167621128|ref|ZP_02389759.1| sulfate adenylyltransferase subunit 2 [Burkholderia thailandensis
           Bt4]
          Length = 309

 Score = 42.2 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 51/195 (26%), Gaps = 19/195 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF---------DRVETLSFDYGQRNKVELE 51
           + +++ +     LLFSGG+DS   L  AL  F              +  D G      ++
Sbjct: 23  LRELVAECSKPALLFSGGKDSVVVLHLALKAFGLGANRKTTLPFPLVHIDTGHNYDEVID 82

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
            R    K+I          L   H+      G +     T +         L      G 
Sbjct: 83  FRDRRAKEIGA-------QLVVGHVEDSIARGTVVLRRETDSRNAAQAVTLLETIERHGY 135

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
             +                I     E         R +        ++ G    V    P
Sbjct: 136 TAMIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHRGEHLRV---FP 192

Query: 172 LMWLKKYETWKLAQD 186
           +    + + W+    
Sbjct: 193 ISNWTELDVWQYIAR 207


>gi|311746572|ref|ZP_07720357.1| asparagine synthase (glutamine-hydrolyzing) [Algoriphagus sp. PR1]
 gi|126575474|gb|EAZ79806.1| asparagine synthase (glutamine-hydrolyzing) [Algoriphagus sp. PR1]
          Length = 622

 Score = 42.2 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 20/63 (31%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            S G DSS   + A +    +  ++    + +  E        KK+           G  
Sbjct: 264 LSSGIDSSLITAIAKELKPDILAVTMATAESHSDESPAATEFAKKLDIKQEIIPVDPGSL 323

Query: 75  HIL 77
            +L
Sbjct: 324 SVL 326


>gi|126441160|ref|YP_001058059.1| sulfate adenylyltransferase subunit 2 [Burkholderia pseudomallei
           668]
 gi|126220653|gb|ABN84159.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei 668]
          Length = 321

 Score = 42.2 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 51/195 (26%), Gaps = 19/195 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF---------DRVETLSFDYGQRNKVELE 51
           + +++ +     LLFSGG+DS   L  AL  F              +  D G      ++
Sbjct: 35  LRELVAECSKPALLFSGGKDSVVVLHLALKAFGLGANRRTTLPFPLVHIDTGHNYDEVID 94

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
            R    K+I          L   H+      G +     T +         L      G 
Sbjct: 95  FRDRRAKQIGA-------ELVVGHVEDSIARGTVVLRRETDSRNAAQAVTLLETIERHGY 147

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
             +                I     E         R +        ++ G    V    P
Sbjct: 148 TAMIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWSVYNARLHRGEHLRV---FP 204

Query: 172 LMWLKKYETWKLAQD 186
           +    + + W+    
Sbjct: 205 ISNWTELDVWQYIAR 219


>gi|150021480|ref|YP_001306834.1| ExsB family protein [Thermosipho melanesiensis BI429]
 gi|149794001|gb|ABR31449.1| ExsB family protein [Thermosipho melanesiensis BI429]
          Length = 342

 Score = 42.2 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 22/67 (32%), Gaps = 8/67 (11%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          K    ++ FSGG DS+       +      VE ++  YG              + + +  
Sbjct: 22 KKDKLIVAFSGGLDSTVTAILCREALGPRNVELVNVVYG------PFTYKRSIQIVKDAA 75

Query: 65 PKWKDSL 71
           +    +
Sbjct: 76 KRLGLKI 82


>gi|107103288|ref|ZP_01367206.1| hypothetical protein PaerPA_01004357 [Pseudomonas aeruginosa PACS2]
 gi|313109183|ref|ZP_07795152.1| GMP synthase [Pseudomonas aeruginosa 39016]
 gi|310881654|gb|EFQ40248.1| GMP synthase [Pseudomonas aeruginosa 39016]
          Length = 527

 Score = 42.2 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 54/185 (29%), Gaps = 19/185 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMP 65
           +   LL  SGG DSS   +       D++  +  D G  R     +      + +   + 
Sbjct: 229 SSKVLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRLHEGDQVMAMFAENMGVKVI 288

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +            L  L  ++     + +  +             +++ FL         
Sbjct: 289 RANAEDK-----FLGRLAGVADPEEKRKIIGRTFIEVFDEEATKLQDVKFLAQGTIY--- 340

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                        + +G    +   I++      L  +    +  PL  L K E  K+  
Sbjct: 341 ---------PDVIESAGAKTGKAHVIKSHHNVGGLPEDMQFELVEPLRELFKDEVRKIGL 391

Query: 186 DIGGQ 190
           ++G  
Sbjct: 392 ELGLP 396


>gi|74310809|ref|YP_309228.1| tRNA(Ile)-lysidine synthetase [Shigella sonnei Ss046]
 gi|73854286|gb|AAZ86993.1| cell cycle protein [Shigella sonnei Ss046]
          Length = 432

 Score = 42.2 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 5/60 (8%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYGQRNKVELECRLC 55
          +N  +  +   L+ FSGG DS+  L   +          +  +   +G     +   R C
Sbjct: 5  LNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHGLSANADAWVRHC 64


>gi|18311901|ref|NP_558568.1| asparagine synthetase (asnB) [Pyrobaculum aerophilum str. IM2]
 gi|18159317|gb|AAL62750.1| asparagine synthetase (asnB) [Pyrobaculum aerophilum str. IM2]
          Length = 274

 Score = 42.2 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 15/28 (53%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSF 40
          +LFSGG DS+  L+ A+ R      +  
Sbjct: 14 VLFSGGIDSTLVLTAAVKRGLMPLAVHV 41


>gi|81427749|ref|YP_394748.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Lactobacillus sakei subsp. sakei 23K]
 gi|91206809|sp|Q38ZE1|GUAA_LACSS RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|78609390|emb|CAI54436.1| Guanosine monophosphate synthase (Glutamine amidotransferase)
           [Lactobacillus sakei subsp. sakei 23K]
          Length = 517

 Score = 42.2 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 57/204 (27%), Gaps = 30/204 (14%)

Query: 1   MNDIIKKA----------PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVE 49
           MND I                LL  SGG DSS           D++ ++  D+G   K E
Sbjct: 205 MNDFIDMQIEKIREQVGDKKVLLGLSGGVDSSVVGVLLHRAIGDQLVSIFVDHGLLRKGE 264

Query: 50  LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
           +E    V + +          +         + G        K +  +            
Sbjct: 265 VE---QVMESLGGKFGLNIIQVDAKERFMSKLAGVSDPEKKRKIIGNEFIQVFDEEAT-- 319

Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
                            GI  +  G   TD          TI++      L  +   ++ 
Sbjct: 320 --------------KLNGIDFLAQGTLYTDIIESGTSTATTIKSHHNVGGLPEDMQFSLI 365

Query: 170 TPLMWLKKYETWKLAQDIGGQDLV 193
            PL  L K E   L + +G    +
Sbjct: 366 EPLNTLFKDEVRDLGEKLGMPYEL 389


>gi|194435002|ref|ZP_03067243.1| tRNA(Ile)-lysidine synthase [Shigella dysenteriae 1012]
 gi|194416738|gb|EDX32866.1| tRNA(Ile)-lysidine synthase [Shigella dysenteriae 1012]
 gi|320180904|gb|EFW55826.1| tRNA(Ile)-lysidine synthetase [Shigella boydii ATCC 9905]
 gi|332097611|gb|EGJ02588.1| tRNA(Ile)-lysidine synthase [Shigella dysenteriae 155-74]
          Length = 432

 Score = 42.2 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 5/60 (8%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYGQRNKVELECRLC 55
          +N  +  +   L+ FSGG DS+  L   +          +  +   +G     +   R C
Sbjct: 5  LNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHGLSANADAWVRHC 64


>gi|119386404|ref|YP_917459.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Paracoccus denitrificans PD1222]
 gi|119376999|gb|ABL71763.1| GMP synthase (glutamine-hydrolyzing) [Paracoccus denitrificans
           PD1222]
          Length = 519

 Score = 42.2 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 52/188 (27%), Gaps = 17/188 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DSS       +   D++  +  D+G               ++ E    
Sbjct: 221 SKRVICGLSGGVDSSVAAVLIHEAIGDQLTCVFVDHG-------------LLRLNEAEEV 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   +I  +         S  + V+                   +        +  
Sbjct: 268 VTMFRDNYNIPLIHADESELFLSALEGVSDPEVKRKTIGKLFIDVFQKYASEIEGAEFLA 327

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
             T     +    +SG P      I++      L  +  + +  PL  L K E   L ++
Sbjct: 328 QGTLYPDVIESVSFSGGPSVT---IKSHHNVGGLPEKMGLKLVEPLRELFKDEVRALGRE 384

Query: 187 IGGQDLVN 194
           +G  +   
Sbjct: 385 LGLPEKFI 392


>gi|319779430|ref|YP_004130343.1| GMP synthase [Taylorella equigenitalis MCE9]
 gi|317109454|gb|ADU92200.1| GMP synthase [Taylorella equigenitalis MCE9]
          Length = 532

 Score = 42.2 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 60/189 (31%), Gaps = 24/189 (12%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D+G            +R+   + + +  +
Sbjct: 230 VILGLSGGVDSSVAAALIHRAIGDKLTCVFVDHG-----------LLREHEGDQVMQALN 278

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                 I+ +                ++   +      + GR  + +  A   A      
Sbjct: 279 ENLGVKIIRVDATNQFLG-------KLEGVSDPEQKRKIIGREFVEVFQAEA-AKLPNAK 330

Query: 130 NIVI---GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +          + +G    +  TI++      L    ++ +  PL  L K E  KL   
Sbjct: 331 WLAQGTIYPDVIESAGSKTGKAVTIKSHHNVGGLPETLNLKLLEPLRELFKDEVRKLGLA 390

Query: 187 IGGQDLVNL 195
           +G    +  
Sbjct: 391 LGIPQSLIF 399


>gi|270291925|ref|ZP_06198140.1| argininosuccinate synthase [Streptococcus sp. M143]
 gi|270279453|gb|EFA25295.1| argininosuccinate synthase [Streptococcus sp. M143]
          Length = 398

 Score = 42.2 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 54/216 (25%), Gaps = 34/216 (15%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               +L +SGG D+S  ++W       V  +  D G     +LE       K+       
Sbjct: 3   KEKVILAYSGGLDTSVAITWLKKD-YDVIAVCMDVG--EGKDLEFIHDKALKVGA----- 54

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-LAYRL 126
                E +++ +    +   +                   V   +   +      +A++ 
Sbjct: 55  ----VESYVIDV---KEEFANDYVLVALQAHAYYEQKYPLVSALSRPLISKKLVEIAHQT 107

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G T I  G                     +   L     V          + E  + A++
Sbjct: 108 GATTIAHGCTGKGNDQVRFE--------VSIAALDPNLKVVAPVREWKWSREEEIQYAKE 159

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYG--CNS 220
            G     +                +  WG    C  
Sbjct: 160 NGVPVPADFD--------NPYSVDQNLWGRANECGV 187


>gi|313124956|ref|YP_004035220.1| argininosuccinate synthase [Halogeometricum borinquense DSM
          11551]
 gi|312291321|gb|ADQ65781.1| argininosuccinate synthase [Halogeometricum borinquense DSM
          11551]
          Length = 411

 Score = 42.2 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 4/64 (6%)

Query: 10 SALLL-FSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
          +++ L FSGG D++ C+S   +   +D V  ++ D GQ  + E E            +  
Sbjct: 2  TSVALAFSGGLDTTVCVSLLQEEYGYDEVVGVTVDVGQ-PESEFEEAKETADAHGLDIHV 60

Query: 67 WKDS 70
              
Sbjct: 61 VDAK 64


>gi|227540223|ref|ZP_03970272.1| GMP synthase [Sphingobacterium spiritivorum ATCC 33300]
 gi|300771945|ref|ZP_07081816.1| GMP synthase (glutamine-hydrolyzing) [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|227239947|gb|EEI89962.1| GMP synthase [Sphingobacterium spiritivorum ATCC 33300]
 gi|300761331|gb|EFK58156.1| GMP synthase (glutamine-hydrolyzing) [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 516

 Score = 42.2 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 54/181 (29%), Gaps = 12/181 (6%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DS+             +  +  D+G   K E E  L   K +   +  
Sbjct: 213 NDHVILALSGGVDSTVAGVLLHQAIGKNLHCIFVDHGLLRKDEYEQVLDSYKNMGLNIKG 272

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                           G ++  S  +     I  + +       + I   +     A  L
Sbjct: 273 INAKDL--------FYGRLAGISEPEQKRKIIGASFIDVFDEAAKEIQKELPEGVEAKWL 324

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   I   + E+     P      I++      L     + V  PL  L K E  K+ + 
Sbjct: 325 GQGTIYPDIIESISVKGPSAT---IKSHHNVGGLPDFMKLKVVEPLKTLFKDEVRKVGKT 381

Query: 187 I 187
           +
Sbjct: 382 L 382


>gi|160935943|ref|ZP_02083317.1| hypothetical protein CLOBOL_00838 [Clostridium bolteae ATCC
          BAA-613]
 gi|158441185|gb|EDP18902.1| hypothetical protein CLOBOL_00838 [Clostridium bolteae ATCC
          BAA-613]
          Length = 479

 Score = 42.2 bits (97), Expect = 0.060,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 20/58 (34%), Gaps = 4/58 (6%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALD----RFDRVETLSFDYGQRNKVELECRLCVR 57
          +++     +   SGG DS   L+        R   +  L   +G R +        VR
Sbjct: 17 MLEPGDRVIAAVSGGADSVCLLALLCAWREPRGISIRALHVHHGLRGEEADRDADFVR 74


>gi|332141955|ref|YP_004427693.1| GMP synthase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327551977|gb|AEA98695.1| GMP synthase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 525

 Score = 42.2 bits (97), Expect = 0.061,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 50/183 (27%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V +   +     
Sbjct: 228 ERVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEADQVMEMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            + +  +    L  L  I    L +                  R           A  L 
Sbjct: 285 INRVDAEGRF-LDRLKGIEDPELKRKAIGNE----------FVRVFDEEASKLENAKWLA 333

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I   V E+  S         I++      L  +  + +  PL  L K E  K+  ++
Sbjct: 334 QGTIYPDVIESAGSATGKAHV--IKSHHNVGGLPEDMELGLVEPLRELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|295689966|ref|YP_003593659.1| GMP synthase large subunit [Caulobacter segnis ATCC 21756]
 gi|295431869|gb|ADG11041.1| GMP synthase, large subunit [Caulobacter segnis ATCC 21756]
          Length = 520

 Score = 42.2 bits (97), Expect = 0.061,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 52/183 (28%), Gaps = 23/183 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS       +   D++  +  D G   K E        +++V L     
Sbjct: 224 KVICGLSGGVDSSVAAVLIHEAIGDQLTCVFVDTGLLRKNE-------AEQVVTLFRDHY 276

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +            LG+++  S  +                 GR  I +      A   G 
Sbjct: 277 NIPLVHVDAGDLFLGELAGVSDPETKRK-----------TIGRLFIDVFDKEA-AKIDGA 324

Query: 129 TNIVI---GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
             +          +           I++      L     + +  PL  L K E   L  
Sbjct: 325 QFLAQGTLYPDVVESVSARGGPSAVIKSHHNVGGLPDYMKLKLVEPLRELFKDEVRALGV 384

Query: 186 DIG 188
           ++G
Sbjct: 385 ELG 387


>gi|218264372|ref|ZP_03478229.1| hypothetical protein PRABACTJOHN_03925 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222070|gb|EEC94720.1| hypothetical protein PRABACTJOHN_03925 [Parabacteroides johnsonii
           DSM 18315]
          Length = 358

 Score = 42.2 bits (97), Expect = 0.061,   Method: Composition-based stats.
 Identities = 22/177 (12%), Positives = 49/177 (27%), Gaps = 6/177 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
            L SGG DSS  +    +            G   + +     C  ++ +E+        G
Sbjct: 5   ALVSGGVDSSVVVHQLKEAGYDPTIFYIRIGM--EDKDGYIDCPAEEDIEITSYIAKKYG 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
               + +++  +     ++  +    +        +  + I F  F              
Sbjct: 63  CRFEI-VSLHDEYWDRVVSYTIDSVKRGLTPNPDMMCNKYIKFGCFEEKWGKDFDKIATG 121

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM---WLKKYETWKLAQD 186
                T+  G            +    LG  + + +   +     L K E   +A+ 
Sbjct: 122 HYATTTEIDGKVWLSTAKDPVKDQTDFLGQITRLQIQKLMFPIGHLMKSEVRAIAEQ 178


>gi|146307977|ref|YP_001188442.1| asparagine synthase (glutamine-hydrolyzing) [Pseudomonas mendocina
           ymp]
 gi|145576178|gb|ABP85710.1| asparagine synthase (glutamine-hydrolyzing) [Pseudomonas mendocina
           ymp]
          Length = 589

 Score = 42.2 bits (97), Expect = 0.061,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 29/86 (33%), Gaps = 12/86 (13%)

Query: 1   MNDIIKKAPSALL----LFSGGQDSSTCLSWALDRFDRVETLSF-----DYGQRNKVELE 51
           M + +     A +    L SGG DSS  +    +       L+F     D G     E +
Sbjct: 249 MREAVAIRQRAAVDVGVLLSGGVDSSMLVGLLREAGVE-NLLTFSIGFQDAGGERGDEFQ 307

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHIL 77
               + +       +    +GE  I+
Sbjct: 308 YSDLIARHFATRHHQL--RIGEHEII 331


>gi|307132050|ref|YP_003884066.1| GMP synthetase (glutamine aminotransferase) [Dickeya dadantii 3937]
 gi|306529579|gb|ADM99509.1| GMP synthetase (glutamine aminotransferase) [Dickeya dadantii 3937]
          Length = 525

 Score = 42.2 bits (97), Expect = 0.061,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 49/184 (26%), Gaps = 17/184 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS           DR+  +  D G    + L     V +   +    
Sbjct: 227 KDKVILGLSGGVDSSVTALLLHRAIGDRLTCVFVDNG---LLRLNEAEQVMEMFGDQFGL 283

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +  +     A+ G     +  K +     D                          
Sbjct: 284 NIVHVAAEERFLSALAGIDDPEAKRKTIGRVFVDVFDEEAGKLTDVKWLAQGT------- 336

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                 I     + +     +   I++      L  +  + +  PL  L K E  K+  +
Sbjct: 337 ------IYPDVIESAASATGKAHVIKSHHNVGGLPDDMALGLVEPLKELFKDEVRKIGLE 390

Query: 187 IGGQ 190
           +G  
Sbjct: 391 LGLP 394


>gi|298711646|emb|CBJ32701.1| GMP synthase (glutamine-hydrolyzing) [Ectocarpus siliculosus]
          Length = 434

 Score = 42.2 bits (97), Expect = 0.061,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 51/194 (26%), Gaps = 20/194 (10%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKK 59
            +++      +   SGG DSS           DR   +  D G  R    +E    +++K
Sbjct: 131 RELVGPEGQVIGAVSGGVDSSVAAVLLQKAIGDRFHAVLVDNGLLRKNEAVEVVSRLKEK 190

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
           +   +           +L      +     + K      Q+       V       L   
Sbjct: 191 LGINLHCVDAKDRFLTLLDGCTDPESKRKIIGKTFIHVFQEEAERIGKVDFLLQGTLYPD 250

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
                                S        TI++      L    H+ +  PL  L K E
Sbjct: 251 VIE------------------SISYKGPSATIKSHHNVGGLPDTMHLKLIEPLRELFKDE 292

Query: 180 TWKLAQDIGGQDLV 193
              L   +G  +  
Sbjct: 293 VRSLGMALGMDEFS 306


>gi|238917789|ref|YP_002931306.1| cell cycle protein MesJ [Eubacterium eligens ATCC 27750]
 gi|238873149|gb|ACR72859.1| cell cycle protein MesJ [Eubacterium eligens ATCC 27750]
          Length = 486

 Score = 42.2 bits (97), Expect = 0.061,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 27/72 (37%), Gaps = 10/72 (13%)

Query: 2  NDIIKKAPSALLLFSGGQDSSTCLSWALDRFD-------RVETLSFDYG--QRNKVELEC 52
          N+++      ++  SGG DS  CL   L  +         +  +  ++G  Q    + E 
Sbjct: 15 NNMLTDCERVVVGLSGGADS-VCLLMVLKGYIERRRLQTELCAVHVNHGIRQEAGDDEEF 73

Query: 53 RLCVRKKIVELM 64
             + +++    
Sbjct: 74 ARALCERMGVEF 85


>gi|228956505|ref|ZP_04118302.1| tRNA(Ile)-lysidine synthase [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|229107750|ref|ZP_04237387.1| tRNA(Ile)-lysidine synthase [Bacillus cereus Rock1-15]
 gi|229142870|ref|ZP_04271312.1| tRNA(Ile)-lysidine synthase [Bacillus cereus BDRD-ST24]
 gi|229148473|ref|ZP_04276730.1| tRNA(Ile)-lysidine synthase [Bacillus cereus m1550]
 gi|228635015|gb|EEK91587.1| tRNA(Ile)-lysidine synthase [Bacillus cereus m1550]
 gi|228640582|gb|EEK96970.1| tRNA(Ile)-lysidine synthase [Bacillus cereus BDRD-ST24]
 gi|228675723|gb|EEL30930.1| tRNA(Ile)-lysidine synthase [Bacillus cereus Rock1-15]
 gi|228803195|gb|EEM50016.1| tRNA(Ile)-lysidine synthase [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 480

 Score = 42.2 bits (97), Expect = 0.061,   Method: Composition-based stats.
 Identities = 22/197 (11%), Positives = 52/197 (26%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D++K   + ++  SGG DS   L + L++                          + +V 
Sbjct: 21  DVLKNDSTIVVGVSGGPDSLALLYYLLEK--------------------RAEKQLEIVVA 60

Query: 63  LMPKW--KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +      D   ED      +  ++     T  + +                     F  
Sbjct: 61  HVDHMFRGDESYEDLQFVQGLCEELGIICETIRINVSQYQQQYGMNAQVAARECRYAFLE 120

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKK 177
            +  +     + +G    D       R       +    + ++       +  PL+ + K
Sbjct: 121 RIMKKYDARYVALGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGYLIRPLLGVTK 180

Query: 178 YETWKLAQDIGGQDLVN 194
            E       +     ++
Sbjct: 181 EEIVDYCNKLNLMPRID 197


>gi|296127476|ref|YP_003634728.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Brachyspira murdochii DSM 12563]
 gi|296019292|gb|ADG72529.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Brachyspira murdochii DSM 12563]
          Length = 352

 Score = 42.2 bits (97), Expect = 0.061,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 59/191 (30%), Gaps = 11/191 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIVEL 63
               A+ + S G DS+T      ++ + V  ++    +  +R  +   C    + K+VE 
Sbjct: 1   MEKIAVGM-SAGVDSTTTAKILKEKGNEVFGVTMLLWNGDKRAPLSGSCYSPSQLKMVEE 59

Query: 64  MPKWKDSLGED-HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA--- 119
             K+  ++G D +   ++ +              K    N           + L  A   
Sbjct: 60  CRKYAQAIGIDYYAFDVSDMFQKKVIDYVAESYKKGLTPNPCIMCNSQIKFMALFEAIEK 119

Query: 120 ---ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
                  +  G    +    +T        ++           L       +  P+    
Sbjct: 120 QGLEFDKFATGHYAGIKYDEKTKRYLLLRGKNLIKDQSYFLYRLTQNQLSKIIFPMHENT 179

Query: 177 KYETWKLAQDI 187
           K +T K+A++ 
Sbjct: 180 KEDTRKMAREY 190


>gi|213964113|ref|ZP_03392353.1| sulfate adenylyltransferase subunit 2 [Capnocytophaga sputigena
           Capno]
 gi|213953250|gb|EEB64592.1| sulfate adenylyltransferase subunit 2 [Capnocytophaga sputigena
           Capno]
          Length = 299

 Score = 42.2 bits (97), Expect = 0.061,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 51/181 (28%), Gaps = 12/181 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRV----ETLSFDYGQRNKVELECRLCV 56
           M ++  +     LLFSGG+DS T +  A+  F  +      +  D G      L  R  +
Sbjct: 17  MREVAAQFERPALLFSGGKDSITLVHLAMKAFAPMKIPFPLVHIDTGHNFPEALAYRDAL 76

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
            K+I          L    +        ++           +Q + L +T         +
Sbjct: 77  AKRIGA-------ELIVRQVEDTIKAKGLTEPKGKFASRNWLQTHTLLDTIEEFHFDACI 129

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPD-CRHDTIRAIETAINLGMESHVTVHTPLMWL 175
             A     +         V +      P   R +        I  G    V   +    L
Sbjct: 130 GGARRDEEKARAKERFFSVRDEFGQWDPKLQRPELWNIYNGRIQKGENMRVFPISNWTEL 189

Query: 176 K 176
            
Sbjct: 190 D 190


>gi|187931657|ref|YP_001891641.1| GMP synthase [Francisella tularensis subsp. mediasiatica FSC147]
 gi|226739622|sp|B2SGK4|GUAA_FRATM RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|187712566|gb|ACD30863.1| GMP synthase (glutamine-hydrolyzing) [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 516

 Score = 42.2 bits (97), Expect = 0.061,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 53/184 (28%), Gaps = 17/184 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +       D++  +  D G                ++ L   
Sbjct: 218 TDKVILGLSGGVDSSVVAAILHQAIGDQLTCIFVDTG----------------LLRLNED 261

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +        + + ++   + +     +                   IF   AA +    
Sbjct: 262 DQVMQVFAEHMDINVIRINAKNRFLDALRGICDPEQKRKIIGKLFVDIFDEEAAKIENAK 321

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +    I     + +G    +   I++      L  E  + +  PL  L K E  KL   
Sbjct: 322 WLAQGTIYSDVIESAGNNQSKAHVIKSHHNVGGLPKEMKLKLLEPLRELFKDEVRKLGLG 381

Query: 187 IGGQ 190
           +G  
Sbjct: 382 LGLP 385


>gi|218235253|ref|YP_002364913.1| tRNA(Ile)-lysidine synthetase [Bacillus cereus B4264]
 gi|218163210|gb|ACK63202.1| tRNA(Ile)-lysidine synthetase [Bacillus cereus B4264]
          Length = 476

 Score = 42.2 bits (97), Expect = 0.061,   Method: Composition-based stats.
 Identities = 22/197 (11%), Positives = 52/197 (26%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D++K   + ++  SGG DS   L + L++                          + +V 
Sbjct: 17  DVLKNDSTIVVGVSGGPDSLALLYYLLEK--------------------RAEKQLEIVVA 56

Query: 63  LMPKW--KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +      D   ED      +  ++     T  + +                     F  
Sbjct: 57  HVDHMFRGDESYEDLQFVQGLCEELGIICETIRINVSQYQQQYGMNAQVAARECRYAFLE 116

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKK 177
            +  +     + +G    D       R       +    + ++       +  PL+ + K
Sbjct: 117 RIMKKYDARYVALGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGYLIRPLLGVTK 176

Query: 178 YETWKLAQDIGGQDLVN 194
            E       +     ++
Sbjct: 177 EEIVDYCNKLNLMPRID 193


>gi|118497993|ref|YP_899043.1| glutamine amidotransferase/asparagine synthase [Francisella
           tularensis subsp. novicida U112]
 gi|194323218|ref|ZP_03057002.1| asparagine synthase (glutamine-hydrolyzing) [Francisella tularensis
           subsp. novicida FTE]
 gi|118412464|gb|ABK81667.1| WbtH [Francisella novicida U112]
 gi|118423899|gb|ABK90289.1| glutamine amidotransferase/asparagine synthase [Francisella
           novicida U112]
 gi|194322582|gb|EDX20062.1| asparagine synthase (glutamine-hydrolyzing) [Francisella tularensis
           subsp. novicida FTE]
          Length = 630

 Score = 42.2 bits (97), Expect = 0.061,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 15  FSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIV 61
            SGG DS+T ++        ++ T S  + Q+   E E    V K I 
Sbjct: 271 LSGGIDSTTVVALMQSMSKNKINTFSIGFNQKEYNEAEHARAVAKHIG 318


>gi|167040842|ref|YP_001663827.1| ExsB family protein [Thermoanaerobacter sp. X514]
 gi|300914879|ref|ZP_07132195.1| PP-loop domain protein [Thermoanaerobacter sp. X561]
 gi|307723887|ref|YP_003903638.1| PP-loop domain-containing protein [Thermoanaerobacter sp. X513]
 gi|166855082|gb|ABY93491.1| ExsB family protein [Thermoanaerobacter sp. X514]
 gi|300889814|gb|EFK84960.1| PP-loop domain protein [Thermoanaerobacter sp. X561]
 gi|307580948|gb|ADN54347.1| PP-loop domain protein [Thermoanaerobacter sp. X513]
          Length = 286

 Score = 42.2 bits (97), Expect = 0.061,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 57/193 (29%), Gaps = 38/193 (19%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCL---SWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           + + + K  +AL+ FSGG DS+         L   +RV  ++       K EL+  + + 
Sbjct: 20  LQEYLLKLDNALIAFSGGVDSTFLAKVSYDVL--GNRVLAVTATSPMHPKSELKEAVELA 77

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           KKI               ++               ++    +    P             
Sbjct: 78  KKIG----------IPHLVVEFN------------DILEIEEFRKNPLNRCYICKSNLFS 115

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
               +A   G   I+ G    D S +   R                  +        +KK
Sbjct: 116 RFKAIAEEKGFKYILEGTNADDVSDFRPGRRALKE-----------LGILSPLLECGIKK 164

Query: 178 YETWKLAQDIGGQ 190
            E   L++++G  
Sbjct: 165 EEIRILSKELGLP 177


>gi|325207027|gb|ADZ02480.1| argininosuccinate synthase [Neisseria meningitidis M04-240196]
          Length = 447

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 19 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 75


>gi|325205078|gb|ADZ00532.1| argininosuccinate synthase [Neisseria meningitidis M01-240355]
          Length = 447

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 19 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 75


>gi|325143535|gb|EGC65856.1| argininosuccinate synthase [Neisseria meningitidis M01-240013]
          Length = 447

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 19 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 75


>gi|325139443|gb|EGC61983.1| argininosuccinate synthase [Neisseria meningitidis CU385]
          Length = 447

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 19 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 75


>gi|325135355|gb|EGC57976.1| argininosuccinate synthase [Neisseria meningitidis M0579]
 gi|325203106|gb|ADY98560.1| argininosuccinate synthase [Neisseria meningitidis M01-240149]
 gi|325208975|gb|ADZ04427.1| argininosuccinate synthase [Neisseria meningitidis NZ-05/33]
          Length = 447

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 19 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 75


>gi|325131361|gb|EGC54072.1| argininosuccinate synthase [Neisseria meningitidis M6190]
          Length = 197

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 19 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 75


>gi|325129243|gb|EGC52082.1| argininosuccinate synthase [Neisseria meningitidis OX99.30304]
          Length = 447

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 19 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 75


>gi|325127275|gb|EGC50212.1| argininosuccinate synthase [Neisseria meningitidis N1568]
          Length = 447

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 19 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 75


>gi|319409575|emb|CBY89867.1| argininosuccinate synthase (citrulline-aspartate ligase)
          [Neisseria meningitidis WUE 2594]
          Length = 447

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 19 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 75


>gi|319639620|ref|ZP_07994367.1| argininosuccinate synthase [Neisseria mucosa C102]
 gi|317399191|gb|EFV79865.1| argininosuccinate synthase [Neisseria mucosa C102]
          Length = 447

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 19 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 75


>gi|317165250|gb|ADV08791.1| argininosuccinate synthase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 459

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 31 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 87


>gi|313669289|ref|YP_004049573.1| argininosuccinate synthase [Neisseria lactamica ST-640]
 gi|313006751|emb|CBN88221.1| argininosuccinate synthase [Neisseria lactamica 020-06]
          Length = 447

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 19 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 75


>gi|313676372|ref|YP_004054368.1| asparagine synthase (glutamine-hydrolyzing) [Marivirga tractuosa
           DSM 4126]
 gi|312943070|gb|ADR22260.1| asparagine synthase (glutamine-hydrolyzing) [Marivirga tractuosa
           DSM 4126]
          Length = 631

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDY-GQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
            SGG DSS   + A  + + + T S  Y G     E E    V K I      +  SL +
Sbjct: 264 LSGGVDSSIISAIAAKKVESLHTFSIGYKGHSFFDETEYANAVAKHIGSKHQVFSLSLDD 323

Query: 74  DH 75
            +
Sbjct: 324 LY 325


>gi|309379968|emb|CBX21379.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 411

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 22/190 (11%), Positives = 43/190 (22%), Gaps = 31/190 (16%)

Query: 15  FSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            SGG DS   L   +    +     E +   +G                           
Sbjct: 3   LSGGLDSVVLLQLLVRAGKKGGFIPEAVHIHHG-----LSPRADDWADFCQNYCDMLGVR 57

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
           L    +        I  ++  K  A   +           R+     F   +A   G+  
Sbjct: 58  LETVKVCVEKNGLGIEAAARQKRYATFAEKGFDVLALAHHRDDQIETFMLAVARGGGLRA 117

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
           +                                    +  PL+   + + W  AQ  G  
Sbjct: 118 LSAMPAVRPLGENGI----------------------IWRPLLPFSRQDIWDYAQKHGLP 155

Query: 191 DLVNLILEES 200
           ++ +    ++
Sbjct: 156 NIEDESNTDT 165


>gi|309379807|emb|CBX21583.1| argininosuccinate synthase [Neisseria lactamica Y92-1009]
          Length = 447

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 19 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 75


>gi|308390211|gb|ADO32531.1| argininosuccinate synthase [Neisseria meningitidis alpha710]
          Length = 447

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 19 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 75


>gi|304388759|ref|ZP_07370817.1| argininosuccinate synthase [Neisseria meningitidis ATCC 13091]
 gi|304337323|gb|EFM03499.1| argininosuccinate synthase [Neisseria meningitidis ATCC 13091]
          Length = 459

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 31 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 87


>gi|298370558|ref|ZP_06981873.1| argininosuccinate synthase [Neisseria sp. oral taxon 014 str.
          F0314]
 gi|298281168|gb|EFI22658.1| argininosuccinate synthase [Neisseria sp. oral taxon 014 str.
          F0314]
          Length = 447

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 19 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 75


>gi|296313751|ref|ZP_06863692.1| argininosuccinate synthase [Neisseria polysaccharea ATCC 43768]
 gi|296839677|gb|EFH23615.1| argininosuccinate synthase [Neisseria polysaccharea ATCC 43768]
          Length = 447

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 19 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 75


>gi|261393445|emb|CAX51090.1| argininosuccinate synthase (citrulline--aspartate ligase)
          [Neisseria meningitidis 8013]
          Length = 447

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 19 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 75


>gi|260752318|ref|YP_003225211.1| GMP synthase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
 gi|258551681|gb|ACV74627.1| GMP synthase, large subunit [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 526

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 55/184 (29%), Gaps = 17/184 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS       +   D++  +  D+G   + E        +++V L     
Sbjct: 230 RVICGLSGGVDSSVTAVLVHEAIGDQLTCVFVDHGLMRQGE-------AEQVVSLFR--- 279

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E + + L  +                +                       A  L  
Sbjct: 280 ----EHYGIKLVHVNAEDRFLAGLKGVTDPETKRKFIGKTFIEIFEEEAKKIGGADFLAQ 335

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+    +      TI++      L    ++ +  PL  L K E   L +++G
Sbjct: 336 GTLYPDVIESV--SFLGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRDLGRELG 393

Query: 189 GQDL 192
             D+
Sbjct: 394 MPDI 397


>gi|255520350|ref|ZP_05387587.1| GMP synthase [Listeria monocytogenes FSL J1-175]
          Length = 514

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 52/186 (27%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           +++  +  D+G   K E      V   +       
Sbjct: 220 KKVLLALSGGVDSSVVGVLIHKAIGEQLTCIFVDHGLLRKGE---ADQVMATLQGEFNMN 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G         +   K +       +V       L     LA    
Sbjct: 277 IIKVDAKKRFMDKLAG-------VSDPEQKRKIIGNEFIYVFDDEANKLDGVEFLAQGTL 329

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            T+I+                 TI++      L  +    +  PL  L K E   L  ++
Sbjct: 330 YTDIIESGTA---------TAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGTEL 380

Query: 188 GGQDLV 193
           G  D +
Sbjct: 381 GMPDAI 386


>gi|255067261|ref|ZP_05319116.1| argininosuccinate synthase [Neisseria sicca ATCC 29256]
 gi|255048412|gb|EET43876.1| argininosuccinate synthase [Neisseria sicca ATCC 29256]
          Length = 447

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 19 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 75


>gi|254673922|emb|CBA09706.1| Argininosuccinate synthase [Neisseria meningitidis alpha275]
          Length = 447

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 19 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 75


>gi|254671313|emb|CBA08702.1| Argininosuccinate synthase [Neisseria meningitidis alpha153]
          Length = 447

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 19 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 75


>gi|254804073|ref|YP_003082294.1| Argininosuccinate synthase [Neisseria meningitidis alpha14]
 gi|254667615|emb|CBA03391.1| Argininosuccinate synthase [Neisseria meningitidis alpha14]
          Length = 447

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 19 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 75


>gi|256811233|ref|YP_003128602.1| argininosuccinate synthase [Methanocaldococcus fervens AG86]
 gi|256794433|gb|ACV25102.1| argininosuccinate synthase [Methanocaldococcus fervens AG86]
          Length = 395

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 49/185 (26%), Gaps = 22/185 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               A+L +SGG D+S CL         +V ++  D GQ  +                  
Sbjct: 1   MERIAVLAYSGGLDTSCCLKLLEDKYGYKVVSVCVDVGQPEEEIK----------EVEEK 50

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             K  + + + +      +                             +       +A  
Sbjct: 51  AKKLGVLKHYTID---AKEEFVKDYIFKAIKANAMYEGYPLSTALARPLIAYKVIEVAKE 107

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G   +  G        +       I+A +  I   +          + L + E  + A+
Sbjct: 108 VGAEAVAHGCTGKGNDQFRFETTIRIKAPDLKIIAPIRD--------LNLTRVEEIEYAK 159

Query: 186 DIGGQ 190
           + G  
Sbjct: 160 EKGIP 164


>gi|241759071|ref|ZP_04757182.1| argininosuccinate synthase [Neisseria flavescens SK114]
 gi|241320673|gb|EER56926.1| argininosuccinate synthase [Neisseria flavescens SK114]
          Length = 447

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 19 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 75


>gi|240127177|ref|ZP_04739838.1| argininosuccinate synthase [Neisseria gonorrhoeae SK-93-1035]
 gi|268685535|ref|ZP_06152397.1| argininosuccinate synthase [Neisseria gonorrhoeae SK-93-1035]
 gi|268625819|gb|EEZ58219.1| argininosuccinate synthase [Neisseria gonorrhoeae SK-93-1035]
          Length = 447

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 19 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 75


>gi|240017666|ref|ZP_04724206.1| argininosuccinate synthase [Neisseria gonorrhoeae FA6140]
 gi|240081854|ref|ZP_04726397.1| argininosuccinate synthase [Neisseria gonorrhoeae FA19]
 gi|240116771|ref|ZP_04730833.1| argininosuccinate synthase [Neisseria gonorrhoeae PID18]
 gi|260441563|ref|ZP_05795379.1| argininosuccinate synthase [Neisseria gonorrhoeae DGI2]
 gi|268597951|ref|ZP_06132118.1| argininosuccinate synthase [Neisseria gonorrhoeae FA19]
 gi|268602444|ref|ZP_06136611.1| argininosuccinate synthase [Neisseria gonorrhoeae PID18]
 gi|291044928|ref|ZP_06570637.1| argininosuccinate synthase [Neisseria gonorrhoeae DGI2]
 gi|268551739|gb|EEZ46758.1| argininosuccinate synthase [Neisseria gonorrhoeae FA19]
 gi|268586575|gb|EEZ51251.1| argininosuccinate synthase [Neisseria gonorrhoeae PID18]
 gi|291011822|gb|EFE03818.1| argininosuccinate synthase [Neisseria gonorrhoeae DGI2]
          Length = 447

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 19 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 75


>gi|257125170|ref|YP_003163284.1| sulfate adenylyltransferase subunit 2 [Leptotrichia buccalis
           C-1013-b]
 gi|257049109|gb|ACV38293.1| sulfate adenylyltransferase, small subunit [Leptotrichia buccalis
           C-1013-b]
          Length = 300

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 53/179 (29%), Gaps = 14/179 (7%)

Query: 12  LLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++L+S G+DSS  L  A+  F         L  + G + K  +  R    K++   M ++
Sbjct: 29  VMLYSIGKDSSVMLHLAMKAFYPEKPPFPFLHVNTGWKFKEMINFRDRRAKELGIEMIEY 88

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +  G +  +     G      +      +  +         G                 
Sbjct: 89  INPEGVEKNINPFDHGASFTDIMKTQALKQALNKYGFTAAFGGGRRDE-------EKSRA 141

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
              I             + R +  +   T I+ G    V    P+    + + W+  Q 
Sbjct: 142 KERIFSFRNAAQAWDPKNQRPEMWKLYNTEISKGESIRV---FPISNWTEKDIWEYIQR 197


>gi|261380626|ref|ZP_05985199.1| argininosuccinate synthase [Neisseria subflava NJ9703]
 gi|284796605|gb|EFC51952.1| argininosuccinate synthase [Neisseria subflava NJ9703]
          Length = 447

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 19 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 75


>gi|269214458|ref|ZP_05986591.2| argininosuccinate synthase [Neisseria lactamica ATCC 23970]
 gi|269209725|gb|EEZ76180.1| argininosuccinate synthase [Neisseria lactamica ATCC 23970]
          Length = 459

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 31 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 87


>gi|261378545|ref|ZP_05983118.1| argininosuccinate synthase [Neisseria cinerea ATCC 14685]
 gi|269145095|gb|EEZ71513.1| argininosuccinate synthase [Neisseria cinerea ATCC 14685]
          Length = 447

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 19 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 75


>gi|261365139|ref|ZP_05978022.1| argininosuccinate synthase [Neisseria mucosa ATCC 25996]
 gi|288566573|gb|EFC88133.1| argininosuccinate synthase [Neisseria mucosa ATCC 25996]
          Length = 447

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 19 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 75


>gi|168334148|ref|ZP_02692357.1| sulfate adenylyltransferase, small subunit [Epulopiscium sp. 'N.t.
           morphotype B']
          Length = 298

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 58/189 (30%), Gaps = 14/189 (7%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVR 57
            +++ +    ++L+S G+DSS  L  AL  F         L  D   + +  +E R  + 
Sbjct: 18  REVVAECEKPVMLYSIGKDSSCLLHLALKAFYPEKLPFPLLHIDTTWKFREMIEFRDRIA 77

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           K+    M  + +  G    +     G I    +      K  D    N    G       
Sbjct: 78  KQAGIEMLVYTNEEGVKKDINPFDYGSIYTDIMKTEALKKALDKYGFNVAFGGARRDEEA 137

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
             A          I      T      + R +      T IN G    V    P+    +
Sbjct: 138 SRAK-------ERIFSFRNSTHTWDPKNQRPELWDLYNTQINKGESIRV---FPISNWTE 187

Query: 178 YETWKLAQD 186
            + W+  + 
Sbjct: 188 KDVWQYIKQ 196


>gi|161870992|ref|YP_001600172.1| argininosuccinate synthase [Neisseria meningitidis 053442]
 gi|189046395|sp|A9M4B1|ASSY_NEIM0 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|161596545|gb|ABX74205.1| argininosuccinate synthase [Neisseria meningitidis 053442]
          Length = 447

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 19 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 75


>gi|154491735|ref|ZP_02031361.1| hypothetical protein PARMER_01351 [Parabacteroides merdae ATCC
           43184]
 gi|154087976|gb|EDN87021.1| hypothetical protein PARMER_01351 [Parabacteroides merdae ATCC
           43184]
          Length = 358

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 22/177 (12%), Positives = 49/177 (27%), Gaps = 6/177 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
            L SGG DSS  +    +            G   + +     C  ++ +E+        G
Sbjct: 5   ALVSGGVDSSVVVHQLKEAGYDPTIFYIRIGM--EDKDGYIDCPAEEDIEITSYIAKKYG 62

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
               + +++  +     ++  +    +        +  + I F  F              
Sbjct: 63  CRFEI-VSLHDEYWDRVVSYTIDSVKRGLTPNPDMMCNKYIKFGCFEEKWGKDFDKIATG 121

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM---WLKKYETWKLAQD 186
                T+  G            +    LG  + + +   +     L K E   +A+ 
Sbjct: 122 HYATTTEIDGKVWLSTAKDPVKDQTDFLGQITRLQIQKLMFPIGHLMKSEVRAIAEQ 178


>gi|121635775|ref|YP_976020.1| argininosuccinate synthase [Neisseria meningitidis FAM18]
 gi|166220998|sp|A1KWJ8|ASSY_NEIMF RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|120867481|emb|CAM11258.1| argininosuccinate synthase [Neisseria meningitidis FAM18]
 gi|325131216|gb|EGC53928.1| argininosuccinate synthase [Neisseria meningitidis M6190]
 gi|325137390|gb|EGC59978.1| argininosuccinate synthase [Neisseria meningitidis ES14902]
 gi|325141320|gb|EGC63808.1| argininosuccinate synthase [Neisseria meningitidis 961-5945]
 gi|325199206|gb|ADY94662.1| argininosuccinate synthase [Neisseria meningitidis G2136]
          Length = 447

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 19 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 75


>gi|59802272|ref|YP_208984.1| argininosuccinate synthase [Neisseria gonorrhoeae FA 1090]
 gi|194099774|ref|YP_002002909.1| argininosuccinate synthase [Neisseria gonorrhoeae NCCP11945]
 gi|239999954|ref|ZP_04719878.1| argininosuccinate synthase [Neisseria gonorrhoeae 35/02]
 gi|240013097|ref|ZP_04720010.1| argininosuccinate synthase [Neisseria gonorrhoeae DGI18]
 gi|240114131|ref|ZP_04728621.1| argininosuccinate synthase [Neisseria gonorrhoeae MS11]
 gi|240118997|ref|ZP_04733059.1| argininosuccinate synthase [Neisseria gonorrhoeae PID1]
 gi|240122288|ref|ZP_04735250.1| argininosuccinate synthase [Neisseria gonorrhoeae PID24-1]
 gi|240122465|ref|ZP_04735421.1| argininosuccinate synthase [Neisseria gonorrhoeae PID332]
 gi|240126686|ref|ZP_04739572.1| argininosuccinate synthase [Neisseria gonorrhoeae SK-92-679]
 gi|254493476|ref|ZP_05106647.1| argininosuccinate synthase [Neisseria gonorrhoeae 1291]
 gi|268595760|ref|ZP_06129927.1| argininosuccinate synthase [Neisseria gonorrhoeae 35/02]
 gi|268600203|ref|ZP_06134370.1| argininosuccinate synthase [Neisseria gonorrhoeae MS11]
 gi|268604712|ref|ZP_06138879.1| argininosuccinate synthase [Neisseria gonorrhoeae PID1]
 gi|268681056|ref|ZP_06147918.1| argininosuccinate synthase [Neisseria gonorrhoeae PID332]
 gi|268685265|ref|ZP_06152127.1| argininosuccinate synthase [Neisseria gonorrhoeae SK-92-679]
 gi|293398005|ref|ZP_06642211.1| argininosuccinate synthase [Neisseria gonorrhoeae F62]
 gi|75507283|sp|Q5F5G5|ASSY_NEIG1 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|226729195|sp|B4RQS8|ASSY_NEIG2 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|59719167|gb|AAW90572.1| putative argininosuccinate synthase [Neisseria gonorrhoeae FA
          1090]
 gi|193935064|gb|ACF30888.1| argininosuccinate synthase [Neisseria gonorrhoeae NCCP11945]
 gi|226512516|gb|EEH61861.1| argininosuccinate synthase [Neisseria gonorrhoeae 1291]
 gi|268549149|gb|EEZ44567.1| argininosuccinate synthase [Neisseria gonorrhoeae 35/02]
 gi|268584334|gb|EEZ49010.1| argininosuccinate synthase [Neisseria gonorrhoeae MS11]
 gi|268588843|gb|EEZ53519.1| argininosuccinate synthase [Neisseria gonorrhoeae PID1]
 gi|268621340|gb|EEZ53740.1| argininosuccinate synthase [Neisseria gonorrhoeae PID332]
 gi|268625549|gb|EEZ57949.1| argininosuccinate synthase [Neisseria gonorrhoeae SK-92-679]
 gi|291611951|gb|EFF41020.1| argininosuccinate synthase [Neisseria gonorrhoeae F62]
          Length = 447

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 19 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 75


>gi|77361211|ref|YP_340786.1| argininosuccinate synthase [Pseudoalteromonas haloplanktis
          TAC125]
 gi|119361309|sp|Q3IHT8|ASSY_PSEHT RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|76876122|emb|CAI87344.1| Argininosuccinate synthase (Citrulline--aspartate ligase)
          [Pseudoalteromonas haloplanktis TAC125]
          Length = 400

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 16/54 (29%), Gaps = 1/54 (1%)

Query: 5  IKKAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          +      +L +SGG D S+       +    V     D GQ  +          
Sbjct: 1  MSSFKKVVLAYSGGLDTSAIVPWLKENYGCEVIAFVADVGQGAEELEGVEAKAI 54


>gi|218767312|ref|YP_002341824.1| argininosuccinate synthase [Neisseria meningitidis Z2491]
 gi|24211532|sp|Q9JWM1|ASSY_NEIMA RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|121051320|emb|CAM07605.1| argininosuccinate synthase [Neisseria meningitidis Z2491]
          Length = 447

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 19 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 75


>gi|15677942|ref|NP_275114.1| argininosuccinate synthase [Neisseria meningitidis MC58]
 gi|24211533|sp|Q9JXC1|ASSY_NEIMB RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|7227385|gb|AAF42437.1| argininosuccinate synthase [Neisseria meningitidis MC58]
 gi|316984014|gb|EFV62993.1| argininosuccinate synthase [Neisseria meningitidis H44/76]
 gi|325133301|gb|EGC55967.1| argininosuccinate synthase [Neisseria meningitidis M13399]
 gi|325201169|gb|ADY96624.1| argininosuccinate synthase [Neisseria meningitidis H44/76]
          Length = 447

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  L W   +       + + GQ ++ +         +      +  D
Sbjct: 19 IAFSGGLDTSAALLWMKLKGALPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLID 75


>gi|114267|sp|P17714|ASNS_MESAU RecName: Full=Asparagine synthetase [glutamine-hydrolyzing];
           AltName: Full=Glutamine-dependent asparagine synthetase
 gi|49614|emb|CAA36375.1| unnamed protein product [Mesocricetus auratus]
          Length = 561

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 23/73 (31%), Gaps = 4/73 (5%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRV---ETL-SFDYGQRNKVELECRLCVR 57
              +      + L SGG DSS   S  L +         L +F  G  +  +L     V 
Sbjct: 244 RKRLMTDRRIVCLLSGGLDSSLVASSLLKQLKEAQVQYPLQTFAIGMEDSPDLLAARKVA 303

Query: 58  KKIVELMPKWKDS 70
             I     +   +
Sbjct: 304 NYIGSEHHEVLFN 316


>gi|325661920|ref|ZP_08150540.1| argininosuccinate synthase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|331085787|ref|ZP_08334870.1| argininosuccinate synthase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|325471772|gb|EGC74990.1| argininosuccinate synthase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|330406710|gb|EGG86215.1| argininosuccinate synthase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 405

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 25/212 (11%), Positives = 57/212 (26%), Gaps = 23/212 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L +SGG D++  + W  + F   V     D GQ  +++         K+     
Sbjct: 1   MKEKVILAYSGGLDTTAIIPWLKENFDYEVICCCIDCGQGEELDGLEERA---KLSGASK 57

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            + +++ ++      +       +        +    +    +  + +         A  
Sbjct: 58  LYIENIVDEFCDDYIV---PCVQANAIYENKYLLGTAMARPGIAKKLVEIARKEHASAIC 114

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G T         +           I A     +L                + E      
Sbjct: 115 HGATGKGNDQIRFELGIKALAPDLKIIAPWRMTDL-----------WTLNSREEEIAYCH 163

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
             G    ++L  + S + Y   R+  +    G
Sbjct: 164 QHG----IDLPFDASQS-YSRDRNLWHISHEG 190


>gi|313235384|emb|CBY10899.1| unnamed protein product [Oikopleura dioica]
          Length = 636

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLC 55
            + + +    L+L SGG DS    +        +RV+ L  D G   KVEL     
Sbjct: 197 REQVGETGKILVLISGGVDSCVLAALCFKAIGKERVKCLHIDNGFMRKVELVNAQR 252


>gi|296445515|ref|ZP_06887471.1| sulfate adenylyltransferase, small subunit [Methylosinus
          trichosporium OB3b]
 gi|296256920|gb|EFH03991.1| sulfate adenylyltransferase, small subunit [Methylosinus
          trichosporium OB3b]
          Length = 301

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 4/63 (6%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCV 56
          M +++ +A   ++L+S G+DS+  L  A   F      +  L  D   + +   E R  V
Sbjct: 20 MREVVSEADRPVILYSIGKDSAVMLHLACKAFYPSPPPMPLLHVDTTWKFRAMYEFRDRV 79

Query: 57 RKK 59
           ++
Sbjct: 80 ARE 82


>gi|296116400|ref|ZP_06835014.1| GMP synthase [Gluconacetobacter hansenii ATCC 23769]
 gi|295976993|gb|EFG83757.1| GMP synthase [Gluconacetobacter hansenii ATCC 23769]
          Length = 532

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 50/187 (26%), Gaps = 17/187 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS           +++  +  D G     E      V K   +    
Sbjct: 234 KGRVICGLSGGVDSSVAAVLIHQAIGEQLTCIFVDPGILRAGE---ADEVIKTFRDRFNI 290

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     L      D+  S+L      +I+   +   F+                  
Sbjct: 291 H---------LIHRDASDLFLSALEGVSDPEIKRKTIGRLFIEVFEEEAAKLGGAEFLAQ 341

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G           +   +      TI++      L     + +  PL  L K E   L ++
Sbjct: 342 GTLY----PDVIESVSFTGGPSVTIKSHHNVGGLPERMKMKLVEPLRELFKDEVRALGRE 397

Query: 187 IGGQDLV 193
           +   + +
Sbjct: 398 LDIPEAI 404


>gi|254786815|ref|YP_003074244.1| tRNA(Ile)-lysidine synthase domain containing protein
          [Teredinibacter turnerae T7901]
 gi|237683861|gb|ACR11125.1| tRNA(Ile)-lysidine synthase domain containing protein
          [Teredinibacter turnerae T7901]
          Length = 436

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 9/43 (20%)

Query: 13 LLFSGGQDSSTCLSWALDRFDR-VETLSFDY--------GQRN 46
          + FSGG DS+  L  A       ++ +  ++         QR+
Sbjct: 22 IAFSGGLDSTVLLHQAAQLGLEHLQAVHVNHQLSPNAQAWQRH 64


>gi|168016344|ref|XP_001760709.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688069|gb|EDQ74448.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 603

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 22/173 (12%), Positives = 47/173 (27%), Gaps = 9/173 (5%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETL--------SFDYGQRNKVELECRLCVRKKIVELM 64
           +L SGG DSS   S A       + +        SF  G     +L+    V K I    
Sbjct: 235 VLLSGGLDSSLVASVAARHLAETKAVRIWGNELHSFCVGLEGSPDLKAAREVAKYIGTRH 294

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            ++     ++ +  L+ +     +     +        +          + L    +   
Sbjct: 295 HEFN-FTVQEGLDALSDVIYHVETYDVTTIRASTPMFLMTRKIKALGVKMVLSGEGSDEI 353

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
             G           ++      +   +   +        S   +   + +L K
Sbjct: 354 FGGYLYFHKAPNREEFHHELVRKIKALHLYDCQRANKSTSAWGLEARVPFLDK 406


>gi|146345375|sp|Q59491|ASSY_LACLM RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|300069764|gb|ADJ59164.1| argininosuccinate synthase [Lactococcus lactis subsp. cremoris
          NZ9000]
          Length = 397

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 16/36 (44%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
              +L +SGG D+S  + W  D+   V     D G
Sbjct: 3  NKKIVLAYSGGLDTSVAVKWLTDKGFDVIAACMDVG 38


>gi|116510952|ref|YP_808168.1| argininosuccinate synthase [Lactococcus lactis subsp. cremoris
          SK11]
 gi|122940414|sp|Q032X6|ASSY_LACLS RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|116106606|gb|ABJ71746.1| argininosuccinate synthase [Lactococcus lactis subsp. cremoris
          SK11]
          Length = 397

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 16/36 (44%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
              +L +SGG D+S  + W  D+   V     D G
Sbjct: 3  NKKIVLAYSGGLDTSVAVKWLTDKGFDVIAACMDVG 38


>gi|152985472|ref|YP_001346731.1| GMP synthase [Pseudomonas aeruginosa PA7]
 gi|150960630|gb|ABR82655.1| GMP synthase [Pseudomonas aeruginosa PA7]
          Length = 527

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 54/185 (29%), Gaps = 19/185 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMP 65
           +   LL  SGG DSS   +       D++  +  D G  R     +      + +   + 
Sbjct: 229 SSKVLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRLHEGDQVMAMFAENMGVKVI 288

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +            L  L  ++     + +  +             +++ FL         
Sbjct: 289 RANAEDK-----FLGRLAGVADPEEKRKIIGRTFIEVFDEEATKLQDVKFLAQGTIY--- 340

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                        + +G    +   I++      L  +    +  PL  L K E  K+  
Sbjct: 341 ---------PDVIESAGAKTGKAHVIKSHHNVGGLPEDMQFELVEPLRELFKDEVRKIGL 391

Query: 186 DIGGQ 190
           ++G  
Sbjct: 392 ELGLP 396


>gi|86132328|ref|ZP_01050923.1| GMP synthase (glutamine-hydrolyzing) [Dokdonia donghaensis MED134]
 gi|85817247|gb|EAQ38430.1| GMP synthase (glutamine-hydrolyzing) [Dokdonia donghaensis MED134]
          Length = 515

 Score = 42.2 bits (97), Expect = 0.062,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 52/187 (27%), Gaps = 18/187 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DS+   +         +  +  + G            + +K  E    
Sbjct: 218 EDRVILGLSGGVDSTVAATLLHKAIGKNLYCIFVNNG------------LLRK-DEFTQV 264

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            K   G    +           +L      + +   +   FV              A  L
Sbjct: 265 LKQYEGMGLNVKGVDASARFLEALEGESDPETKRKAIGRVFVEV--FDDESKLVENAKWL 322

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   I   V E+  +        TI++      L     + V  PL  L K E  ++   
Sbjct: 323 GQGTIYPDVIESVSATG--GPSATIKSHHNVGGLPDFMTLEVVEPLRMLFKDEVRRVGAS 380

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 381 MGLSPEL 387


>gi|313113047|ref|ZP_07798684.1| argininosuccinate synthase [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310624639|gb|EFQ07957.1| argininosuccinate synthase [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 470

 Score = 42.2 bits (97), Expect = 0.063,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 4/57 (7%)

Query: 5   IKKA--PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVR 57
           +KK      +L +SGG D+S  + W  + +    V  +S D GQ  +++        
Sbjct: 61  MKKENIKKVVLAYSGGLDTSIIIPWLKENYNNCEVVAVSGDVGQGTELDGLEEKAKA 117


>gi|307546377|ref|YP_003898856.1| cell cycle protein [Halomonas elongata DSM 2581]
 gi|307218401|emb|CBV43671.1| cell cycle protein [Halomonas elongata DSM 2581]
          Length = 426

 Score = 42.2 bits (97), Expect = 0.063,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 42/150 (28%), Gaps = 13/150 (8%)

Query: 7   KAPSAL-LLFSGGQDSS---TCLSWALDRFDRVE-TLSFDYGQRNKVELECRLCVRKKIV 61
               A+ +  SGG DSS   T    A  R  R    L   +G              +   
Sbjct: 20  PPGRAVWVALSGGLDSSLLLTLAVEASRRHPRPLRALHIHHG-----LQAAADDFERHCR 74

Query: 62  ELMPKWKDSLGEDHI-LPLAILGDISHSSLTKNVAMK--IQDNNLPNTFVPGRNIIFLVF 118
           EL  +   SL  + + + ++    +  ++     A      +          R+     F
Sbjct: 75  ELCERLGVSLCVERVDVDVSGGQGLEGAARHARYAAFRRCLEAGDTLWLAQHRDDQAETF 134

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRH 148
                   G   +     E   +G+   R 
Sbjct: 135 LLAALRGAGPRGLAAMPVERGQAGFRLARP 164


>gi|298715854|emb|CBJ28319.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1083

 Score = 42.2 bits (97), Expect = 0.063,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 22/81 (27%), Gaps = 15/81 (18%)

Query: 13  LLFSGGQDSSTCLSWALDRFDR-------------VETLSFDYGQRNKVELECRLCVRKK 59
           +LFSGG DS    +   +                 +  + FD    ++            
Sbjct: 476 ILFSGGLDSVVLAALLAEEGAEGRGPAVPKGEAIDLINVCFDSPSGHQSPDRLASIAA-- 533

Query: 60  IVELMPKWKDSLGEDHILPLA 80
           + EL   +         +  +
Sbjct: 534 VGELKRLFPSHAWRLVCVDAS 554


>gi|295104520|emb|CBL02064.1| argininosuccinate synthase [Faecalibacterium prausnitzii SL3/3]
          Length = 410

 Score = 42.2 bits (97), Expect = 0.063,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 4/57 (7%)

Query: 5  IKKA--PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVR 57
          +KK      +L +SGG D+S  + W  + +    V  +S D GQ  +++        
Sbjct: 1  MKKENIKKVVLAYSGGLDTSIIIPWLKENYNNCEVVAVSGDVGQGTELDGLEEKAKA 57


>gi|260435745|ref|ZP_05789715.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Synechococcus sp. WH 8109]
 gi|260413619|gb|EEX06915.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Synechococcus sp. WH 8109]
          Length = 383

 Score = 42.2 bits (97), Expect = 0.063,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 25/69 (36%), Gaps = 6/69 (8%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +  SGG DSS   +  ++   +VE L+        +      C  + +V+     + 
Sbjct: 26 RVAVGLSGGVDSSLTAALLVEAGWQVEGLTL------WLMSGKGACCAEGLVDAAGICEQ 79

Query: 70 SLGEDHILP 78
               H++ 
Sbjct: 80 LGIPHHVVD 88


>gi|257437652|ref|ZP_05613407.1| argininosuccinate synthase [Faecalibacterium prausnitzii A2-165]
 gi|257199959|gb|EEU98243.1| argininosuccinate synthase [Faecalibacterium prausnitzii A2-165]
          Length = 411

 Score = 42.2 bits (97), Expect = 0.063,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 4/57 (7%)

Query: 5  IKKA--PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVR 57
          +KK      +L +SGG D+S  + W  + +    V  +S D GQ  +++        
Sbjct: 1  MKKENIKKVVLAYSGGLDTSIIIPWLKENYNNCEVVAVSGDVGQGTELDGLEEKAKA 57


>gi|160944990|ref|ZP_02092216.1| hypothetical protein FAEPRAM212_02505 [Faecalibacterium
          prausnitzii M21/2]
 gi|158442721|gb|EDP19726.1| hypothetical protein FAEPRAM212_02505 [Faecalibacterium
          prausnitzii M21/2]
          Length = 410

 Score = 42.2 bits (97), Expect = 0.063,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 4/57 (7%)

Query: 5  IKKA--PSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVR 57
          +KK      +L +SGG D+S  + W  + +    V  +S D GQ  +++        
Sbjct: 1  MKKENIKKVVLAYSGGLDTSIIIPWLKENYNNCEVVAVSGDVGQGTELDGLEEKAKA 57


>gi|300933640|ref|ZP_07148896.1| tRNA-specific 2-thiouridylase MnmA [Corynebacterium resistens DSM
           45100]
          Length = 374

 Score = 42.2 bits (97), Expect = 0.063,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 48/176 (27%), Gaps = 4/176 (2%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK-KIVELMPKWKDSLGE 73
            SGG DS+   S AL+    V  +     Q  +            +      +  D LG 
Sbjct: 1   MSGGVDSAVAASRALEAGHDVVGVHLALSQSPEAVRAGSRGCCSLEDSADARRVADKLGI 60

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
              +      D   + +  N          PN  +     I        +  LG   +  
Sbjct: 61  PFYVW--DFSDRFKADVIDNFVDSYSIGETPNPCLRCNEKIKFEALLDRSIALGFDAVAT 118

Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK-KYETWKLAQDIG 188
           G     + G      D  +     + +  +  +      +    K +  + A + G
Sbjct: 119 GHYARLHDGVLRRGIDANKDQSYVLGVLTDEQLAHCMFPVGDTIKPDIREEAAENG 174


>gi|295114733|emb|CBL35580.1| tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine
           synthetase, C-terminal domain [butyrate-producing
           bacterium SM4/1]
          Length = 482

 Score = 42.2 bits (97), Expect = 0.063,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 52/197 (26%), Gaps = 16/197 (8%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR----FDRVETLSFDYGQRNKVELECRLCVR 57
           N ++K     ++  SGG DS   LS   D       R+  +   +G R +          
Sbjct: 30  NGMLKAGQRVVVGLSGGADSVCLLSLLSDMRSSLSIRLRAVHVHHGLRGQE--------A 81

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
            +  +   +    L    IL +      + +                      R      
Sbjct: 82  DRDADFSRELCRKLDIPFILKMENAHQEAQNRRISEEEAGRLLRYEAFEQEAARWEEEER 141

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                A  + I          D S      H    +    +         V  PL+ + +
Sbjct: 142 EQEGAALPVRIAV----AHHGDDSAETILYHLFRGSGLRGLAGIAPVRGRVIRPLLCVSR 197

Query: 178 YETWKLAQDIGGQDLVN 194
            E  +  ++ G   + +
Sbjct: 198 QEILEYLREEGLSYVTD 214


>gi|152978797|ref|YP_001344426.1| tRNA(Ile)-lysidine synthetase [Actinobacillus succinogenes 130Z]
 gi|226695533|sp|A6VNE4|TILS_ACTSZ RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
          Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
          Full=tRNA(Ile)-lysidine synthetase
 gi|150840520|gb|ABR74491.1| tRNA(Ile)-lysidine synthetase [Actinobacillus succinogenes 130Z]
          Length = 427

 Score = 42.2 bits (97), Expect = 0.063,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 7/61 (11%)

Query: 7  KAPSALLLFSGGQDSSTCLSW-ALDRFDRVE----TLSFDYGQRNKVELECR--LCVRKK 59
          +    L+ FSGG DS+  L+  A  R +R       +   +G              + +K
Sbjct: 12 QHSRYLIAFSGGADSTALLALFAKSRQNRPHLQLRAIHIHHGLNVAANDWAAHCRRICEK 71

Query: 60 I 60
          +
Sbjct: 72 L 72


>gi|118580426|ref|YP_901676.1| GMP synthase [Pelobacter propionicus DSM 2379]
 gi|226739654|sp|A1AQJ8|GUAA_PELPD RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|118503136|gb|ABK99618.1| GMP synthase (glutamine-hydrolyzing) [Pelobacter propionicus DSM
           2379]
          Length = 520

 Score = 42.2 bits (97), Expect = 0.063,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 56/185 (30%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +L  SGG DSS   +       D++  +  D G    + LE    V +   E +  
Sbjct: 222 SERVILGLSGGVDSSVAAALIHRAIGDQLTCVFVDNG---LLRLEEGDQVMRTFAENLGV 278

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +  +     A+ G+       K +     +     +               +    
Sbjct: 279 KVIRVNAEERFLSALAGESDPEKKRKIIGSLFVEIFDEESNR-------------IEDAR 325

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +    I     + +G    +   I++      L     + +  PL  L K E   + ++
Sbjct: 326 WLAQGTIYPDVIESAGAKTGKAHNIKSHHNVGGLPEYMKLKLLEPLRELFKDEVRAIGEE 385

Query: 187 IGGQD 191
           +G   
Sbjct: 386 LGLPH 390


>gi|332297715|ref|YP_004439637.1| GMP synthase, small subunit [Treponema brennaborense DSM 12168]
 gi|332180818|gb|AEE16506.1| GMP synthase, small subunit [Treponema brennaborense DSM 12168]
          Length = 653

 Score = 42.2 bits (97), Expect = 0.064,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 50/185 (27%), Gaps = 16/185 (8%)

Query: 12  LLLF-SGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           +LLF SGG DS+   +         RV  L  D G   K E      + ++         
Sbjct: 217 VLLFLSGGVDSTVAFALLNKALGQQRVLGLHIDNGFMRKNE---SAVIAERYKNFG---- 269

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                          +    ++ +    + +   +   F+  R+ +           L  
Sbjct: 270 -----FTNFICEDASESFLQAIYRETDPQKKRKAVGENFITVRDAVVERLKLDENEWLLA 324

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
              +                 T       I   + +   +  PL  L K E   +   IG
Sbjct: 325 QGTLYPDIIESGGTKNSHTIKTHHNRVDGIQ-ALIAKGLIIEPLKDLYKDEVRLIGMKIG 383

Query: 189 GQDLV 193
             + +
Sbjct: 384 LNEEL 388


>gi|320108171|ref|YP_004183761.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Terriglobus saanensis SP1PR4]
 gi|319926692|gb|ADV83767.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Terriglobus saanensis SP1PR4]
          Length = 389

 Score = 42.2 bits (97), Expect = 0.064,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 49/159 (30%), Gaps = 15/159 (9%)

Query: 2   NDIIKKAPSALL----LFSGGQDSSTCLSWALDRFDRVETLSFD-YGQR----NKVELEC 52
           N  I +AP A++      SGG DSS   +    +   +  L+   + QR    ++   E 
Sbjct: 7   NSTIAEAPIAVVPIAVAMSGGVDSSAVAALLRSQGHTLVGLTLQLWNQRRLAGHEGMPEQ 66

Query: 53  ---RLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
              R C    + +     +      +++      +   + + K    +      P     
Sbjct: 67  VRGRCCSIDDVYDARRVAEQLEIPYYVVNQ---QERFEADVVKPFVAEYLAGRTPIPCTL 123

Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRH 148
             N +        A ++G   I  G    +       R 
Sbjct: 124 CNNHLKFDQLLLTARQIGAEKIATGHYARNEFDVARNRW 162


>gi|290559145|gb|EFD92507.1| asparagine synthase [Candidatus Parvarchaeum acidophilus ARMAN-5]
 gi|326422520|gb|EGD71916.1| Asparagine synthase [Candidatus Parvarchaeum acidophilus
          ARMAN-5_'5-way FS']
          Length = 300

 Score = 42.2 bits (97), Expect = 0.064,   Method: Composition-based stats.
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLS 39
          IIK  P  + L SGG DSS     A   F +++ +S
Sbjct: 65 IIKNKPDCV-LVSGGIDSSILAVIAKKEFKKIKLVS 99


>gi|227534132|ref|ZP_03964181.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Lactobacillus paracasei subsp. paracasei ATCC 25302]
 gi|227188239|gb|EEI68306.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Lactobacillus paracasei subsp. paracasei ATCC 25302]
          Length = 517

 Score = 42.2 bits (97), Expect = 0.064,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 57/186 (30%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS            ++ ++  D+G   K E      V + +       
Sbjct: 223 KRVLLGLSGGVDSSVVGVLLHKAIGTQLTSIFVDHGLLRKGE---ADQVMESLKGKFGLN 279

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       L  L  ++     + +               GR+ I +      A   G
Sbjct: 280 IIKVNAKDRF-LGDLKGVTDPEKKRKI--------------IGRDFIEVFNEEA-AKLNG 323

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G   TD          TI++      L  +    +  PL  L K E  +L + +
Sbjct: 324 IDFLAQGTLYTDVVESGTDTAQTIKSHHNVGGLPEDLKFKLIEPLNKLFKDEVRELGEKL 383

Query: 188 GGQDLV 193
           G    +
Sbjct: 384 GMPHAL 389


>gi|195607224|gb|ACG25442.1| asparagine synthetase [Zea mays]
          Length = 604

 Score = 42.2 bits (97), Expect = 0.064,   Method: Composition-based stats.
 Identities = 20/178 (11%), Positives = 48/178 (26%), Gaps = 13/178 (7%)

Query: 13  LLFSGGQDSSTCLSWALDR----------FDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +L SGG DSS   + A+              ++   SF  G     +L+    V + +  
Sbjct: 245 VLLSGGLDSSLVAAVAVRHLAGTEAARRWGTKLH--SFCVGLEGSPDLKAAREVAEYLGT 302

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           L  ++     +D I  +  +   + +     +        +          + +    + 
Sbjct: 303 LHHEF-HFTVQDGIDAIEDVIYHTETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSD 361

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
               G         +         +   +   +        S   +   + +L K   
Sbjct: 362 ELFGGYLYFHKAPNKEGLHRETCRKVKALHQYDCLRANKATSAWGLEARVPFLDKEFI 419


>gi|116495445|ref|YP_807179.1| GMP synthase [Lactobacillus casei ATCC 334]
 gi|191638913|ref|YP_001988079.1| GMP synthase [Lactobacillus casei BL23]
 gi|239629831|ref|ZP_04672862.1| GMP synthase [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|301066953|ref|YP_003788976.1| GMP synthase [Lactobacillus casei str. Zhang]
 gi|122263143|sp|Q036Y5|GUAA_LACC3 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|226739637|sp|B3W952|GUAA_LACCB RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|116105595|gb|ABJ70737.1| GMP synthase (glutamine-hydrolyzing) [Lactobacillus casei ATCC 334]
 gi|190713215|emb|CAQ67221.1| GMP synthase [glutamine-hydrolyzing] (Glutamine amidotransferase)
           (GMP synthetase) [Lactobacillus casei BL23]
 gi|239527443|gb|EEQ66444.1| GMP synthase [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|300439360|gb|ADK19126.1| GMP synthase [Lactobacillus casei str. Zhang]
 gi|327382966|gb|AEA54442.1| GMP synthase, large subunit [Lactobacillus casei LC2W]
 gi|327386150|gb|AEA57624.1| GMP synthase, large subunit [Lactobacillus casei BD-II]
          Length = 517

 Score = 42.2 bits (97), Expect = 0.064,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 57/186 (30%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS            ++ ++  D+G   K E      V + +       
Sbjct: 223 KRVLLGLSGGVDSSVVGVLLHKAIGTQLTSIFVDHGLLRKGE---ADQVMESLKGKFGLN 279

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       L  L  ++     + +               GR+ I +      A   G
Sbjct: 280 IIKVNAKDRF-LGDLKGVTDPEKKRKI--------------IGRDFIEVFNEEA-AKLNG 323

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G   TD          TI++      L  +    +  PL  L K E  +L + +
Sbjct: 324 IDFLAQGTLYTDVVESGTDTAQTIKSHHNVGGLPEDLKFKLIEPLNKLFKDEVRELGEKL 383

Query: 188 GGQDLV 193
           G    +
Sbjct: 384 GMPHAL 389


>gi|28395526|gb|AAO39048.1| asparagine synthetase 2 [Hordeum vulgare]
          Length = 581

 Score = 42.2 bits (97), Expect = 0.064,   Method: Composition-based stats.
 Identities = 19/178 (10%), Positives = 45/178 (25%), Gaps = 13/178 (7%)

Query: 13  LLFSGGQDSSTCLSWALDR----------FDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +L SGG DSS   + A               R+   SF  G     +L+    V   +  
Sbjct: 230 VLLSGGLDSSLVAAVAARHFAGTKAAKRWGTRLH--SFCVGLEGSPDLKAAKEVADHLGT 287

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +  ++     +  I  +  +     +     +        +          + +      
Sbjct: 288 VHHEFN-FTVQVRIDAIEDVIYHIETYDVTTIRASTLMFQMSRKIKALGVKMVISGEGAD 346

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
               G         + ++      +   +   +        S   +   + +L K   
Sbjct: 347 EIFGGYLYFHKAPNKEEFHQETCRKIKALHQYDCLRANKATSAWGLEVRVPFLDKEFI 404


>gi|70606252|ref|YP_255122.1| GMP synthase [Sulfolobus acidocaldarius DSM 639]
 gi|68566900|gb|AAY79829.1| GMP synthase [Sulfolobus acidocaldarius DSM 639]
          Length = 373

 Score = 42.2 bits (97), Expect = 0.064,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 10 SALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           A+   SGG DS+T  +       D+V  +  D G   + E+E    + K +
Sbjct: 23 KAIAAVSGGVDSTTAATLTYKLMGDKVIPIIIDTGFLREGEVEKVKNMVKNV 74


>gi|77463571|ref|YP_353075.1| GMP synthase [Rhodobacter sphaeroides 2.4.1]
 gi|221639412|ref|YP_002525674.1| GMP synthase [Rhodobacter sphaeroides KD131]
 gi|91206826|sp|Q3J210|GUAA_RHOS4 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|254800112|sp|B9KT27|GUAA_RHOSK RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|77387989|gb|ABA79174.1| GMP synthase (glutamine-hydrolyzing) [Rhodobacter sphaeroides
           2.4.1]
 gi|221160193|gb|ACM01173.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Rhodobacter sphaeroides KD131]
          Length = 518

 Score = 42.2 bits (97), Expect = 0.064,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 53/183 (28%), Gaps = 17/183 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS       +   D++  +  D+G     E      V K   +      
Sbjct: 222 KVICGLSGGVDSSVAAVLIHEAIGDQLTCVFVDHGLLRLGE---AEQVVKMFRDHYNMPL 278

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E          D+   +L      +++   +   F+                  G 
Sbjct: 279 IHADE---------SDLFLGALEGVSDPEVKRKTIGRLFIDVFQKHAADVGGATFLAQGT 329

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
               +    +   G       TI++      L  +  + +  PL  L K E   L +++G
Sbjct: 330 LYPDVIESVSFSGGP----SVTIKSHHNVGGLPEKMGLKLVEPLRELFKDEVRALGRELG 385

Query: 189 GQD 191
             +
Sbjct: 386 LPE 388


>gi|4678262|emb|CAB41123.1| argininosuccinate synthase-like protein [Arabidopsis thaliana]
 gi|7269334|emb|CAB79393.1| argininosuccinate synthase-like protein [Arabidopsis thaliana]
          Length = 498

 Score = 42.2 bits (97), Expect = 0.064,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQ 44
           K    +L +SGG D+S  + W  +     V   + D GQ
Sbjct: 124 KLKKVVLAYSGGLDTSVIVPWLKENYGCEVVCFTADVGQ 162


>gi|150015449|ref|YP_001307703.1| ExsB family protein [Clostridium beijerinckii NCIMB 8052]
 gi|149901914|gb|ABR32747.1| ExsB family protein [Clostridium beijerinckii NCIMB 8052]
          Length = 274

 Score = 42.2 bits (97), Expect = 0.064,   Method: Composition-based stats.
 Identities = 13/96 (13%), Positives = 34/96 (35%), Gaps = 1/96 (1%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +L FSGG DS+  L  A +   D V+ ++       K E+     + +++       +
Sbjct: 19  KVVLAFSGGVDSTFLLRVAKEALGDNVKAVTILSPYIPKWEIAEARELVRELGVQHEIIE 78

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLP 104
             + +           +  +++   +    ++    
Sbjct: 79  APIIDSIKFNPEDRCYLCKTAVFTMILNVAKEQGYN 114


>gi|229039969|ref|ZP_04189733.1| tRNA(Ile)-lysidine synthase [Bacillus cereus AH676]
 gi|228727377|gb|EEL78570.1| tRNA(Ile)-lysidine synthase [Bacillus cereus AH676]
          Length = 480

 Score = 42.2 bits (97), Expect = 0.064,   Method: Composition-based stats.
 Identities = 22/197 (11%), Positives = 52/197 (26%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D++K   + ++  SGG DS   L + L++                          + +V 
Sbjct: 21  DVLKNDSTIVVGVSGGPDSLALLYYLLEK--------------------RAEKQLEIVVA 60

Query: 63  LMPKW--KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +      D   ED      +  ++     T  + +                     F  
Sbjct: 61  HVDHMFRGDESYEDLQFVQGLCEELGIICETIRINVSQYQQQYGMNAQVAARECRYAFLE 120

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKK 177
            +  +     + +G    D       R       +    + ++       +  PL+ + K
Sbjct: 121 RIMKKYDARYVALGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGYLIRPLLGVTK 180

Query: 178 YETWKLAQDIGGQDLVN 194
            E       +     ++
Sbjct: 181 EEIVDYCNKLNLMPRID 197


>gi|261855227|ref|YP_003262510.1| GMP synthase [Halothiobacillus neapolitanus c2]
 gi|261835696|gb|ACX95463.1| GMP synthase, large subunit [Halothiobacillus neapolitanus c2]
          Length = 528

 Score = 42.2 bits (97), Expect = 0.064,   Method: Composition-based stats.
 Identities = 24/182 (13%), Positives = 49/182 (26%), Gaps = 20/182 (10%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKWK 68
           ++L  SGG DSS   +       D++  +  D G  R     +      + +        
Sbjct: 233 VILGLSGGVDSSVVAALLHKAIGDQLTCIFVDNGLLRLNEGDQVMSTFAQHMGV------ 286

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                  ++ +        +          +                L   A    +  I
Sbjct: 287 ------RVIRVDAEARFLAALEGVADPEDKRKIIGGIFVEIFEEQANLHKNAAWLAQGTI 340

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                     + +G    +   I++      L     + +  PL  L K E  K+  ++G
Sbjct: 341 Y-----PDVIESAGSKTGKAHVIKSHHNVGGLPAHMRLKLLEPLRELFKDEVRKIGVELG 395

Query: 189 GQ 190
             
Sbjct: 396 LP 397


>gi|218674465|ref|ZP_03524134.1| argininosuccinate synthase [Rhizobium etli GR56]
          Length = 399

 Score = 42.2 bits (97), Expect = 0.064,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 29/74 (39%), Gaps = 6/74 (8%)

Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV---ELMP 65
            +L +SGG D+S  L W        V T + D GQ  ++E        + +      + 
Sbjct: 1  KVVLAYSGGLDTSIILKWLQTELGAEVVTFTADLGQGEELEP--ARKKAEMLGIKEIYIE 58

Query: 66 KWKDSLGEDHILPL 79
            ++    D + P+
Sbjct: 59 DVREEFVRDFVFPM 72


>gi|315231228|ref|YP_004071664.1| 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase
           [Thermococcus barophilus MP]
 gi|315184256|gb|ADT84441.1| 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase
           [Thermococcus barophilus MP]
          Length = 423

 Score = 42.2 bits (97), Expect = 0.064,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 20/50 (40%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           ++ +SGG+DS+  L  A   F  V  +            E    + KK+ 
Sbjct: 237 IVPWSGGKDSTAALILASKVFRDVTAVYVKMEYEMPQTDEYVEKLAKKLK 286


>gi|182419059|ref|ZP_02950313.1| argininosuccinate synthase [Clostridium butyricum 5521]
 gi|237669260|ref|ZP_04529242.1| argininosuccinate synthase [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182377014|gb|EDT74584.1| argininosuccinate synthase [Clostridium butyricum 5521]
 gi|237655147|gb|EEP52705.1| argininosuccinate synthase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 407

 Score = 42.2 bits (97), Expect = 0.064,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 49/158 (31%), Gaps = 9/158 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           + K    +L +SGG D+S  + W  +     V  +  + GQ+++++      ++    +L
Sbjct: 1   MIKYNKVVLAYSGGLDTSIIIPWLKETYGCEVIAVCGNVGQKDELDGLEEKAIKTGASKL 60

Query: 64  M-PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     +D+I P    G +            +   +     +  R +         
Sbjct: 61  YIEDLTQEFVDDYIFPTIQAGAVYEG-------KYLLGTSFARPLIGKRLVEIAQKEGAD 113

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINL 160
           A   G T         + +         I A     N+
Sbjct: 114 AICHGCTGKGNDQVRFELAVKAFAPEMPIIAPWRIWNI 151


>gi|332703206|ref|ZP_08423294.1| hypothetical protein Desaf_2070 [Desulfovibrio africanus str.
          Walvis Bay]
 gi|332553355|gb|EGJ50399.1| hypothetical protein Desaf_2070 [Desulfovibrio africanus str.
          Walvis Bay]
          Length = 355

 Score = 42.2 bits (97), Expect = 0.065,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 17/40 (42%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
          M    +K   AL LFSGG DS   +     +   V  L F
Sbjct: 1  MTCKNEKHYDALALFSGGLDSILSVKVLQAQGLSVLALHF 40


>gi|331268350|ref|YP_004394842.1| cell cycle protein MesJ [Clostridium botulinum BKT015925]
 gi|329124900|gb|AEB74845.1| Cell cycle protein MesJ, putative [Clostridium botulinum BKT015925]
          Length = 467

 Score = 42.2 bits (97), Expect = 0.065,   Method: Composition-based stats.
 Identities = 15/129 (11%), Positives = 32/129 (24%), Gaps = 8/129 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALD----RFDRVETLSFDYGQRNKVELECRLCVR 57
           N++ +     ++  SGG DS   L             +     +    + +  E      
Sbjct: 17  NNMFEVKDKVVVAVSGGPDSICLLHILYKLKEELGITLVAAHIN----HCLRGEEADKDE 72

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           + + +                  I  D   S       ++ +  +     V    I    
Sbjct: 73  EYVRKFCENLNIECFVKKEDVHKISKDRGISCEMAGREVRYEFFSEVLNKVGANKIAVAH 132

Query: 118 FAATLAYRL 126
            A   A  +
Sbjct: 133 NANDQAETI 141


>gi|323143708|ref|ZP_08078378.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain
           [Succinatimonas hippei YIT 12066]
 gi|322416511|gb|EFY07175.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain
           [Succinatimonas hippei YIT 12066]
          Length = 522

 Score = 42.2 bits (97), Expect = 0.065,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 51/185 (27%), Gaps = 18/185 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS           D++  +  D G               ++ E      
Sbjct: 227 KVLLGLSGGVDSSVTALLLHKAIGDKLTCVFVDNG-------------LLRLNEGQQVKD 273

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   +  A   +   S+L      + +   + +TF+                  G 
Sbjct: 274 MFADMGLNIVYADASERFLSALKGISDPEAKRKAIGHTFIDVFADEARKLEGVDFLAQGT 333

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                     + +     +   I++      L  +    +  PL  L K E  ++   +G
Sbjct: 334 IY----PDVIESAAAKTGKAHVIKSHHNVGGLPDDLKFKLVEPLRELFKDEVRRIGVKLG 389

Query: 189 GQDLV 193
             + +
Sbjct: 390 LPEKM 394


>gi|295399358|ref|ZP_06809340.1| NAD+ synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294978824|gb|EFG54420.1| NAD+ synthetase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 246

 Score = 42.2 bits (97), Expect = 0.065,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 55/184 (29%), Gaps = 23/184 (12%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           A++  SGG DS+         F             +   +       K + + +   +  
Sbjct: 24  AVVGISGGIDSAVVAHLIKRAFPD----------NSLGLIMPCKSNPKDMEDALKVVESC 73

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
             +  I+ L      +H++L   V  ++++    N                +     + N
Sbjct: 74  GIKHFIIDLT----ETHNTLFGEVEKQLKEKGEWNETAARLGDANTRARLRMTTLYAVAN 129

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQ 190
               +     +          +  +  ++L          PL+   K E  ++A+ +G  
Sbjct: 130 NYGYMVVGTDNAAEWYTGYFTKYGDGGVDL---------VPLVHFTKGEVREMARVLGVP 180

Query: 191 DLVN 194
           D + 
Sbjct: 181 DEII 184


>gi|311744725|ref|ZP_07718522.1| GMP synthase [Aeromicrobium marinum DSM 15272]
 gi|311312034|gb|EFQ81954.1| GMP synthase [Aeromicrobium marinum DSM 15272]
          Length = 531

 Score = 42.2 bits (97), Expect = 0.065,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 53/185 (28%), Gaps = 14/185 (7%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +       DR+  +  D+G   + E E            +    
Sbjct: 231 RVISALSGGVDSAVSTALVQRAIGDRLTAVFVDHGLLREGEAEQVE---------LDYVA 281

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  +  ++          + +T     +                  L         L  
Sbjct: 282 ATGVDLKVVDAREQFLGHLAGVTDPETKRKIIGREFIRVFEAAEAEVLATPGPPVKFLVQ 341

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+           TI++      L  +   ++  PL  L K E  ++ + +G
Sbjct: 342 GTLYPDVVESGGG----EGAATIKSHHNVGGLPEDLEFSLIEPLRALFKDEVREVGRQLG 397

Query: 189 GQDLV 193
             + +
Sbjct: 398 IPEAI 402


>gi|294496034|ref|YP_003542527.1| PP-loop domain protein [Methanohalophilus mahii DSM 5219]
 gi|292667033|gb|ADE36882.1| PP-loop domain protein [Methanohalophilus mahii DSM 5219]
          Length = 305

 Score = 42.2 bits (97), Expect = 0.065,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 26/92 (28%), Gaps = 7/92 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWA-----LDRFDRVETLSFDYGQRNKVEL--ECRLCVRKK 59
           K     +  SGG+DS   L          R   +  ++ D G     E   E    +   
Sbjct: 51  KNEKIAVALSGGKDSCVALYILNKIFGKRRDLELVAITVDEGISVYRERSIEYARKLTSD 110

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLT 91
           I         +   D  L      +  H + +
Sbjct: 111 IGVKHLIHSFADEYDTSLDELAAKERVHGACS 142


>gi|291547668|emb|CBL20776.1| sulfate adenylyltransferase subunit 2 [Ruminococcus sp. SR1/5]
          Length = 300

 Score = 42.2 bits (97), Expect = 0.065,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 55/183 (30%), Gaps = 16/183 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIV-EL 63
              ++L+S G+DSS  L  A+  F         L  +   + K  +E R    K +  E+
Sbjct: 26  EKPVMLYSIGKDSSVMLHLAMKAFYPEKPPFPFLHVNTTWKFKEMIEFRDKTAKDLGIEM 85

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +        +  I P       +    T+ +   ++       F  GR            
Sbjct: 86  LEYINQDGVKQGINPFDSGSAYTDIMKTQALKQALKKYGFTAAFGGGRRD--------EE 137

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
                  I             + R +  +   T IN G    V    P+    + + W+ 
Sbjct: 138 KSRAKERIFSFRNAEQAWDPKNQRPEMWKLYNTEINKGESIRV---FPISNWTETDIWQY 194

Query: 184 AQD 186
            + 
Sbjct: 195 IKR 197


>gi|253682007|ref|ZP_04862804.1| argininosuccinate synthase [Clostridium botulinum D str. 1873]
 gi|253561719|gb|EES91171.1| argininosuccinate synthase [Clostridium botulinum D str. 1873]
          Length = 402

 Score = 42.2 bits (97), Expect = 0.065,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 39/133 (29%), Gaps = 14/133 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L +SGG D+S  + W  + ++  V     + GQ      E    ++KK +    
Sbjct: 1   MKEKVVLAYSGGLDTSITIHWLKENYNLEVIACCVNVGQ-----DEDFDEIKKKAI---- 51

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                 G   I    +  +     + K V                   +       +A++
Sbjct: 52  ----KSGAAKIYVEDVTSEFVSEYIYKGVKANAMYEGKYLLGTSFARPLIAKKLVEIAHK 107

Query: 126 LGITNIVIGVCET 138
            G   I  G    
Sbjct: 108 EGAKYICHGCTGK 120


>gi|240104200|ref|YP_002960509.1| Asparagine synthetase related protein [Thermococcus gammatolerans
           EJ3]
 gi|239911754|gb|ACS34645.1| Asparagine synthetase related protein [Thermococcus gammatolerans
           EJ3]
          Length = 528

 Score = 42.2 bits (97), Expect = 0.065,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 39/99 (39%), Gaps = 4/99 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP--KW 67
           S ++  SGG DS   ++    R   V   +  YG+R+  E+     V KK+       ++
Sbjct: 200 SVVVPLSGGYDSRFIVTSLKQRGVDVICYT--YGRRDSPEVSVAKEVSKKLGCEWHFVEY 257

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNT 106
            +++ ++ +L      +    +      + +QD      
Sbjct: 258 NNAIIDESVLRSREFEEFFKYAFNFVSTIHLQDFFAIKY 296


>gi|229125581|ref|ZP_04254614.1| tRNA(Ile)-lysidine synthase [Bacillus cereus BDRD-Cer4]
 gi|228657898|gb|EEL13703.1| tRNA(Ile)-lysidine synthase [Bacillus cereus BDRD-Cer4]
          Length = 480

 Score = 42.2 bits (97), Expect = 0.065,   Method: Composition-based stats.
 Identities = 22/197 (11%), Positives = 52/197 (26%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D++K   + ++  SGG DS   L + L++                          + +V 
Sbjct: 21  DVLKNDSTIVVGVSGGPDSLALLYYLLEK--------------------RAEKQLEIVVA 60

Query: 63  LMPKW--KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +      D   ED      +  ++     T  + +                     F  
Sbjct: 61  HVDHMFRGDESYEDLQFVQGLCEELGIICETIRINVSQYQQQYGMNAQVAARECRYAFLE 120

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKK 177
            +  +     + +G    D       R       +    + ++       +  PL+ + K
Sbjct: 121 RIMKKYDARYVALGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGYLIRPLLGVTK 180

Query: 178 YETWKLAQDIGGQDLVN 194
            E       +     ++
Sbjct: 181 EEIVDYCNKLNLMPRID 197


>gi|239827863|ref|YP_002950487.1| NAD+ synthetase [Geobacillus sp. WCH70]
 gi|239808156|gb|ACS25221.1| NAD+ synthetase [Geobacillus sp. WCH70]
          Length = 246

 Score = 42.2 bits (97), Expect = 0.065,   Method: Composition-based stats.
 Identities = 21/186 (11%), Positives = 48/186 (25%), Gaps = 27/186 (14%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           A++  SGG DS+         F             +   +       K + + +   +  
Sbjct: 24  AIVGISGGIDSAVVAHLIKRAFPD----------NSLGLIMPCKSNPKDMEDALKVVESC 73

Query: 71  LGEDHILPLAILGDISHSSLTKN--VAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             +  I+ L    ++    + K      +  +          R  + +     +A   G 
Sbjct: 74  GIKHLIIDLTETHNLLFGEVEKQLKEKGEWNEETARLGDANTRARLRMTTLYAVANNYGY 133

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +                        T              PL+   K E  ++A+ +G
Sbjct: 134 MVVGTDNAAE---------------WYTGYFTKYGDGGVDLVPLVHFTKGEVREMARILG 178

Query: 189 GQDLVN 194
             + + 
Sbjct: 179 VPNEII 184


>gi|149197877|ref|ZP_01874926.1| hypothetical protein LNTAR_05301 [Lentisphaera araneosa HTCC2155]
 gi|149139098|gb|EDM27502.1| hypothetical protein LNTAR_05301 [Lentisphaera araneosa HTCC2155]
          Length = 417

 Score = 42.2 bits (97), Expect = 0.065,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 17/39 (43%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR 45
          K    L+LFSGG DS   L       +    L F++  R
Sbjct: 8  KGEKRLVLFSGGADSMALLHLMQSLGELDIVLHFNHNLR 46


>gi|30018334|ref|NP_829965.1| cell cycle protein MesJ [Bacillus cereus ATCC 14579]
 gi|61216614|sp|Q81J84|TILS_BACCR RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|29893874|gb|AAP07166.1| Cell cycle protein MesJ [Bacillus cereus ATCC 14579]
          Length = 476

 Score = 42.2 bits (97), Expect = 0.065,   Method: Composition-based stats.
 Identities = 22/197 (11%), Positives = 52/197 (26%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D++K   + ++  SGG DS   L + L++                          + +V 
Sbjct: 17  DVLKNDSTIVVGVSGGPDSLALLYYLLEK--------------------RAEKQLEIVVA 56

Query: 63  LMPKW--KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +      D   ED      +  ++     T  + +                     F  
Sbjct: 57  HVDHMFRGDESYEDLQFVQGLCEELGIICETIRINVSQYQQQYGMNAQVAARECRYAFLE 116

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKK 177
            +  +     + +G    D       R       +    + ++       +  PL+ + K
Sbjct: 117 RIMKKYDARYVALGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGYLIRPLLGVTK 176

Query: 178 YETWKLAQDIGGQDLVN 194
            E       +     ++
Sbjct: 177 EEIVDYCNKLNLMPRID 193


>gi|332184534|gb|AEE26788.1| Asparagine synthetase (glutamine-hydrolyzing) [Francisella cf.
           novicida 3523]
          Length = 621

 Score = 42.2 bits (97), Expect = 0.065,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 15  FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
            SGG DS+T ++       D++ T S  + Q+   E E    V K I 
Sbjct: 270 LSGGIDSTTIVALMQSMSKDKINTFSIGFNQKEYNEAEHARAVAKHIG 317


>gi|317484593|ref|ZP_07943497.1| PP-loop domain-containing protein [Bilophila wadsworthia 3_1_6]
 gi|316924133|gb|EFV45315.1| PP-loop domain-containing protein [Bilophila wadsworthia 3_1_6]
          Length = 303

 Score = 42.2 bits (97), Expect = 0.065,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 17/47 (36%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVE 49
           +       L+  SGG+DS + +     +   V  L  D G     E
Sbjct: 43 KLFTHEDRILVALSGGKDSLSLMLELSRQGYDVTGLHIDLGIPGSSE 89


>gi|296500896|ref|YP_003662596.1| cell cycle protein MesJ [Bacillus thuringiensis BMB171]
 gi|296321948|gb|ADH04876.1| cell cycle protein MesJ [Bacillus thuringiensis BMB171]
          Length = 476

 Score = 42.2 bits (97), Expect = 0.065,   Method: Composition-based stats.
 Identities = 22/197 (11%), Positives = 52/197 (26%), Gaps = 25/197 (12%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           D++K   + ++  SGG DS   L + L++                          + +V 
Sbjct: 17  DVLKNDSTIVVGVSGGPDSLALLYYLLEK--------------------RAEKQLEIVVA 56

Query: 63  LMPKW--KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            +      D   ED      +  ++     T  + +                     F  
Sbjct: 57  HVDHMFRGDESYEDLQFVQGLCEELGIICETIRINVSQYQQQYGMNAQVAARECRYAFLE 116

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKK 177
            +  +     + +G    D       R       +    + ++       +  PL+ + K
Sbjct: 117 RIMKKYDARYVALGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGYLIRPLLGVTK 176

Query: 178 YETWKLAQDIGGQDLVN 194
            E       +     ++
Sbjct: 177 EEIVDYCNKLNLMPRID 193


>gi|294782577|ref|ZP_06747903.1| NAD+ synthetase [Fusobacterium sp. 1_1_41FAA]
 gi|294481218|gb|EFG28993.1| NAD+ synthetase [Fusobacterium sp. 1_1_41FAA]
          Length = 258

 Score = 42.2 bits (97), Expect = 0.065,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 19/60 (31%), Gaps = 2/60 (3%)

Query: 10 SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           A+L  SGG DS+       D    + V  +   Y   N   L     V + +       
Sbjct: 30 KAVLGLSGGIDSALAAYLLRDALGKENVLAIMMPYKSSNPDSLNHAKLVVEDLGIDSKVI 89


>gi|291166567|gb|EFE28613.1| tRNA(Ile)-lysidine synthase [Filifactor alocis ATCC 35896]
          Length = 466

 Score = 42.2 bits (97), Expect = 0.065,   Method: Composition-based stats.
 Identities = 23/197 (11%), Positives = 50/197 (25%), Gaps = 26/197 (13%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVR 57
           N++I+     ++ FSGG DS   L    +        +     ++  R            
Sbjct: 14  NNLIQPKEKVIVAFSGGPDSVCLLHLLHELKAELDIKLYAFHLNHQIRGLDAHRDAWYC- 72

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
                                L++  +        +  +     N+  +       +   
Sbjct: 73  ---------------------LSLCDEYDIPFFVDSTDVPGYAQNMKMSLEEAARDVRYK 111

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
               L   L    I +     D       R      +     +       +  PL+ ++K
Sbjct: 112 KLFYLKSILNADKIAVAHNMDDQVETVLMRMMRGTGLYGLKGMEQLLSNGIIRPLLSVQK 171

Query: 178 YETWKLAQDIGGQDLVN 194
            E  +  +  G    V+
Sbjct: 172 KEIIEELEQNGIHWQVD 188


>gi|229828318|ref|ZP_04454387.1| hypothetical protein GCWU000342_00376 [Shuttleworthia satelles
          DSM 14600]
 gi|229792912|gb|EEP29026.1| hypothetical protein GCWU000342_00376 [Shuttleworthia satelles
          DSM 14600]
          Length = 410

 Score = 42.2 bits (97), Expect = 0.065,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 6/75 (8%)

Query: 8  APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNK---VELECRLCVRKKIVEL 63
              +L +SGG D++  + W  +     V     D GQ  +   +E   R C   K+   
Sbjct: 3  KDKVVLAYSGGLDTTAIIPWLKENYGYEVICCCVDCGQGEELDGLEERARYCGASKL--Y 60

Query: 64 MPKWKDSLGEDHILP 78
          +    DS  ED+I+P
Sbjct: 61 IEDITDSFAEDYIIP 75


>gi|255036377|ref|YP_003086998.1| sulfate adenylyltransferase subunit 2 [Dyadobacter fermentans DSM
           18053]
 gi|254949133|gb|ACT93833.1| sulfate adenylyltransferase, small subunit [Dyadobacter fermentans
           DSM 18053]
          Length = 317

 Score = 42.2 bits (97), Expect = 0.065,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 53/200 (26%), Gaps = 15/200 (7%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDR---FDRVET-LSFDYGQRNKVELECRLCV 56
           M ++  +     LLFSGG+DS T +  A             +  D G      +E R  +
Sbjct: 35  MREVAGQFERPALLFSGGKDSITLVHLAKKAFAPGKIPFPLVHVDTGHNFIEAIEYRDQL 94

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
            ++I          L   ++        +   +        +Q   L +T         +
Sbjct: 95  AEEINA-------KLIVRYVEDTIKAKGLKEQTGKNASRNWLQTFTLLDTIEEFEFDACI 147

Query: 117 VFAATLAYRLGITN-IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
             A     +      I     E         R +        I  G    V    P+   
Sbjct: 148 GGARRDEEKARAKERIFSFRDEFGQWDPKRQRPELWNLFNGRIQKGENVRV---FPISNW 204

Query: 176 KKYETWKLAQDIGGQDLVNL 195
            + + W   +  G       
Sbjct: 205 TELDVWAYLKREGIALPSIY 224


>gi|332662186|ref|YP_004444974.1| GMP synthase [Haliscomenobacter hydrossis DSM 1100]
 gi|332331000|gb|AEE48101.1| GMP synthase (glutamine-hydrolyzing) [Haliscomenobacter hydrossis
           DSM 1100]
          Length = 512

 Score = 42.2 bits (97), Expect = 0.066,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 51/181 (28%), Gaps = 19/181 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   L+  SGG DS+   +       D +     D G   K E +  L   + +      
Sbjct: 216 SEKVLMALSGGVDSTVAATLLDRAIGDNLICFFVDNGLLRKGEYQQVLDSYEHLG----- 270

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     L +  +   +H           +        +                 L
Sbjct: 271 ----------LNVHGIDAKNHFYEELKGVTNPEAKRKIIGRLFIEVFEAEAAKYPGVKWL 320

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   I   V E+     P      I++      L  +  + +  PL  L K E  ++ ++
Sbjct: 321 GQGTIYPDVIESVSVHGPSVT---IKSHHNVGGLPDKMGLKIVEPLRMLFKDEVRRVGKE 377

Query: 187 I 187
           +
Sbjct: 378 L 378


>gi|300313497|ref|YP_003777589.1| asparagine synthase [Herbaspirillum seropedicae SmR1]
 gi|300076282|gb|ADJ65681.1| asparagine synthase (glutamine-hydrolyzing) protein [Herbaspirillum
           seropedicae SmR1]
          Length = 627

 Score = 42.2 bits (97), Expect = 0.066,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 20/55 (36%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +  SGG DSS   + A     RV+  S  + +    EL     V K +       
Sbjct: 260 VFLSGGVDSSLIAALAARHNKRVKAFSIGFAEVQYNELPYSEAVAKHLGIEQHVH 314


>gi|224475544|ref|YP_002633150.1| GMP synthase [Staphylococcus carnosus subsp. carnosus TM300]
 gi|254800115|sp|B9DLM7|GUAA_STACT RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|222420151|emb|CAL26965.1| putative GMP synthase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 513

 Score = 42.2 bits (97), Expect = 0.066,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 55/185 (29%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS           D++  +  D+G   K E +    V ++  E      
Sbjct: 220 KVLCAMSGGVDSSVVAVLLHKAIGDQLTCIFVDHGLLRKGEGDM---VMEQFGEGFNM-- 274

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                        +  ++      +    + D       +    +      A+     G+
Sbjct: 275 ------------NIIRVNAKDRFMDKLKGVSDPEQKRKIIGNEFVYVFDDEASKLE--GV 320

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G   TD          TI++      L  +    +  P+  L K E   L  ++G
Sbjct: 321 DFLAQGTLYTDVIESGTKTAQTIKSHHNVGGLPEDMQFELIEPINTLFKDEVRALGIELG 380

Query: 189 GQDLV 193
             + +
Sbjct: 381 IPEHL 385


>gi|187735066|ref|YP_001877178.1| Argininosuccinate synthase [Akkermansia muciniphila ATCC BAA-835]
 gi|187425118|gb|ACD04397.1| Argininosuccinate synthase [Akkermansia muciniphila ATCC BAA-835]
          Length = 430

 Score = 42.2 bits (97), Expect = 0.066,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 37/105 (35%), Gaps = 2/105 (1%)

Query: 10  SALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVE-LMPKW 67
             ++ +SGG D+S  L W  +++   +     D GQ  +++      +     +  +   
Sbjct: 2   KIVVAYSGGLDTSVLLKWLKEKYNAEIIAYCADVGQAEELDGLEAKALATGASKCFIGDL 61

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRN 112
           K+    ++I P+     +         ++     +     +  R 
Sbjct: 62  KEDFATNYIFPMIQANALYEGRYLLGTSIARPCISKDMVDLAIRE 106


>gi|330685228|gb|EGG96890.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Staphylococcus epidermidis VCU121]
          Length = 513

 Score = 42.2 bits (97), Expect = 0.066,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 54/185 (29%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS           D++  +  D+G   K E +    V ++  E      
Sbjct: 220 KVLCAMSGGVDSSVVAVLLHKAIGDQLTCIFVDHGLLRKGEGDM---VMEQFGEGFNMNI 276

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             +         + G                 +      + G   +++          G+
Sbjct: 277 IRVNAQDRFMKKLAG---------------VSDPEQKRKIIGNEFVYVFDDEAS-KLKGV 320

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G   TD          TI++      L  +    +  P+  L K E   L  ++G
Sbjct: 321 DFLAQGTLYTDVIESGTKTAQTIKSHHNVGGLPEDMEFELIEPINTLFKDEVRALGIELG 380

Query: 189 GQDLV 193
             + +
Sbjct: 381 IPEHL 385


>gi|326446717|ref|ZP_08221451.1| asparagine synthase, glutamine-hydrolyzing [Streptomyces
           clavuligerus ATCC 27064]
          Length = 655

 Score = 42.2 bits (97), Expect = 0.066,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 22/63 (34%), Gaps = 2/63 (3%)

Query: 13  LLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           +L SGG DSS   + A +      V T S  +   +  E      V + +       +  
Sbjct: 264 VLLSGGLDSSVVAALAQELSPGRPVPTFSAGFEDTDFDETPHARAVARHLGTEHHVVRIG 323

Query: 71  LGE 73
             E
Sbjct: 324 GAE 326


>gi|294817815|ref|ZP_06776457.1| Moenomycin biosynthesis protein MoeF5 [Streptomyces clavuligerus
           ATCC 27064]
 gi|294322630|gb|EFG04765.1| Moenomycin biosynthesis protein MoeF5 [Streptomyces clavuligerus
           ATCC 27064]
          Length = 637

 Score = 42.2 bits (97), Expect = 0.066,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 22/63 (34%), Gaps = 2/63 (3%)

Query: 13  LLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
           +L SGG DSS   + A +      V T S  +   +  E      V + +       +  
Sbjct: 264 VLLSGGLDSSVVAALAQELSPGRPVPTFSAGFEDTDFDETPHARAVARHLGTEHHVVRIG 323

Query: 71  LGE 73
             E
Sbjct: 324 GAE 326


>gi|293375859|ref|ZP_06622125.1| tRNA(Ile)-lysidine synthetase [Turicibacter sanguinis PC909]
 gi|325841824|ref|ZP_08167484.1| tRNA(Ile)-lysidine synthetase [Turicibacter sp. HGF1]
 gi|292645504|gb|EFF63548.1| tRNA(Ile)-lysidine synthetase [Turicibacter sanguinis PC909]
 gi|325489854|gb|EGC92206.1| tRNA(Ile)-lysidine synthetase [Turicibacter sp. HGF1]
          Length = 459

 Score = 42.2 bits (97), Expect = 0.066,   Method: Composition-based stats.
 Identities = 23/192 (11%), Positives = 53/192 (27%), Gaps = 34/192 (17%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWA--LDRFDRVETL--SFDYGQRNKVELECRLCVR 57
            ++++K  S ++  SGG DS   L+    +     +  +    ++ +R   +        
Sbjct: 12  YNLLEKNKSVVVAVSGGADSMALLNLLVEIKELYNLHLVVAHVNHKKRENSD-------- 63

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
                              L   ++  I+  +        +        F          
Sbjct: 64  -------------------LDEVLVNKIALENGLDYEVYYLPKCLTNENFHEYARRERYN 104

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM---ESHVTVHTPLMW 174
           F   +A       IV      D+      R      +   I +        + +  PL+ 
Sbjct: 105 FFKRVAANYKADCIVTAHHADDHLETQIYRLLYHSTVSGLIGIEPIVEYCGLKIIRPLIE 164

Query: 175 LKKYETWKLAQD 186
           + K + +K   +
Sbjct: 165 VTKDDIYKYCSE 176


>gi|317050601|ref|YP_004111717.1| NAD+ synthetase [Desulfurispirillum indicum S5]
 gi|316945685|gb|ADU65161.1| NAD+ synthetase [Desulfurispirillum indicum S5]
          Length = 632

 Score = 42.2 bits (97), Expect = 0.066,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 57/211 (27%), Gaps = 17/211 (8%)

Query: 8   APSALLLFSGGQDSSTCL-------SWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           +P A++  SGG DS+  L       +        +  ++           E  + + K +
Sbjct: 346 SPKAIIGISGGLDSTLALLVTHRTFALLERNPSDIIAITMPGFGTTNRTYENAVTLCKAL 405

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
                +   S        L       H    +NV  + +   L N       I+      
Sbjct: 406 ETDFREIAISQASLEHFKLIGHDPAIHDVTYENVQARERTEILMNIANKHGGIVIGTGDL 465

Query: 121 TLA----------YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT 170
           +            +    +                    +  A+E  +   + + +T   
Sbjct: 466 SEIALGWSTYNGDHMSMYSVNCGVPKTLIRYLVEWVASRSEDAMEELLMDIVNTPITPEL 525

Query: 171 PLMWLKKYETWKLAQDIGGQDLVNLILEESH 201
                +K  T K    IG  +L +  L  + 
Sbjct: 526 LPRDEQKECTQKTEDIIGPYELHDFFLYHTV 556


>gi|239637212|ref|ZP_04678200.1| GMP synthase [Staphylococcus warneri L37603]
 gi|239597168|gb|EEQ79677.1| GMP synthase [Staphylococcus warneri L37603]
          Length = 513

 Score = 42.2 bits (97), Expect = 0.066,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 54/185 (29%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             L   SGG DSS           D++  +  D+G   K E +    V ++  E      
Sbjct: 220 KVLCAMSGGVDSSVVAVLLHKAIGDQLTCIFVDHGLLRKGEGDM---VMEQFGEGFNMNI 276

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             +         + G                 +      + G   +++          G+
Sbjct: 277 IRVNAQDRFMKKLAG---------------VSDPEQKRKIIGNEFVYVFDDEAS-KLKGV 320

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G   TD          TI++      L  +    +  P+  L K E   L  ++G
Sbjct: 321 DFLAQGTLYTDVIESGTKTAQTIKSHHNVGGLPEDMEFELIEPINTLFKDEVRALGIELG 380

Query: 189 GQDLV 193
             + +
Sbjct: 381 IPEHL 385


>gi|188587455|ref|YP_001919000.1| ExsB family protein [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179352142|gb|ACB86412.1| ExsB family protein [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 278

 Score = 42.2 bits (97), Expect = 0.066,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 1/64 (1%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
          +     A++ FSGG DS+  L  A +   D+V  ++       + EL+    + + I   
Sbjct: 24 LSTMDGAVVAFSGGVDSTLLLKVAQEVLSDQVLAVTSTSETIPERELDRAKELAEDIGAK 83

Query: 64 MPKW 67
              
Sbjct: 84 HKTI 87


>gi|167737549|ref|ZP_02410323.1| sulfate adenylyltransferase subunit 2 [Burkholderia pseudomallei
           14]
 gi|167909931|ref|ZP_02497022.1| sulfate adenylyltransferase subunit 2 [Burkholderia pseudomallei
           112]
          Length = 308

 Score = 42.2 bits (97), Expect = 0.066,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 51/195 (26%), Gaps = 19/195 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF---------DRVETLSFDYGQRNKVELE 51
           + +++ +     LLFSGG+DS   L  AL  F              +  D G      ++
Sbjct: 22  LRELVAECSKPALLFSGGKDSVVVLHLALKAFGLGANRRTTLPFPLVHIDTGHNYDEVID 81

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
            R    K+I          L   H+      G +     T +         L      G 
Sbjct: 82  FRDRRAKQIGA-------ELVVGHVEDSIARGTVVLRRETDSRNAAQAVTLLETIERHGY 134

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
             +                I     E         R +        ++ G    V    P
Sbjct: 135 TAMIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHRGEHLRV---FP 191

Query: 172 LMWLKKYETWKLAQD 186
           +    + + W+    
Sbjct: 192 ISNWTELDVWQYIAR 206


>gi|94676486|ref|YP_589073.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Baumannia cicadellinicola str. Hc (Homalodisca
           coagulata)]
 gi|254800087|sp|Q1LSJ1|GUAA_BAUCH RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|94219636|gb|ABF13795.1| GMP synthetase, glutamine-hydrolyzing [Baumannia cicadellinicola
           str. Hc (Homalodisca coagulata)]
          Length = 526

 Score = 42.2 bits (97), Expect = 0.066,   Method: Composition-based stats.
 Identities = 22/181 (12%), Positives = 51/181 (28%), Gaps = 17/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DS+             +  +  D G    +       +R+   + +     
Sbjct: 230 VVLGLSGGVDSTVTAMLLHYAIGVNLTCIFIDNG---LLRYNEASNIREIFSKNLSLNII 286

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +  +     A+ G  +     K +     +          +   +L             
Sbjct: 287 YVRSEDRFLRALAGIYNPEEKRKIIGRLFSEIFEEQARSLTKTATWLAQGTIY------- 339

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                    + +       + I++      L    ++ +  PL  L K E  K+  ++G 
Sbjct: 340 -----PDIIESAISHVSLTNVIKSHHNVGGLPNTLNLKLIEPLKNLFKDEVRKIGLELGL 394

Query: 190 Q 190
            
Sbjct: 395 P 395


>gi|54297636|ref|YP_124005.1| GMP synthase [Legionella pneumophila str. Paris]
 gi|81370447|sp|Q5X4I9|GUAA_LEGPA RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|53751421|emb|CAH12839.1| hypothetical protein lpp1687 [Legionella pneumophila str. Paris]
          Length = 525

 Score = 42.2 bits (97), Expect = 0.066,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 47/185 (25%), Gaps = 16/185 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS   +       +++  +  D G    + L     V       M  
Sbjct: 226 TEKVLLGLSGGVDSSVVAALLHRAIGEQLVCVFVDTG---LLRLNEAEQVLSMFGRHMGI 282

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              ++  +     A+ G        K +     +                          
Sbjct: 283 RIIAVNAEDKFLTALKGVTCPEEKRKIIGRTFIEVFDEEAQKLTDIKWL----------- 331

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                +        +   +     I++      L    ++ +  P+  L K E   +  +
Sbjct: 332 -AQGTIYPDVIESAATSTNDAAVVIKSHHNVGGLPDTLNLKLLEPIRELFKDEVRHVGLE 390

Query: 187 IGGQD 191
           +G   
Sbjct: 391 LGLPH 395


>gi|14591444|ref|NP_143524.1| hypothetical protein PH1680 [Pyrococcus horikoshii OT3]
 gi|3258109|dbj|BAA30792.1| 320aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 320

 Score = 42.2 bits (97), Expect = 0.066,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 36/116 (31%), Gaps = 12/116 (10%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRF----DRVETLSFDYGQRNKVELECRLCVR 57
             +IKK     +  SGG+DS   L             +  ++ D G +     +  + V 
Sbjct: 41  YRMIKKGERIGVAVSGGKDSVVLLHLLAKLRKKFPFEIVAITIDEGIK--GYRDKSIKVA 98

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
           KK  EL+        E HI         +     + +  + +     +     R  
Sbjct: 99  KKNAELL------GVEHHIYRFKDYIGFTLDETVEIMGARGERLGACSYCGVWRRW 148


>gi|86134272|ref|ZP_01052854.1| sulfate adenylyltransferase subunit 2 [Polaribacter sp. MED152]
 gi|85821135|gb|EAQ42282.1| sulfate adenylyltransferase subunit 2 [Polaribacter sp. MED152]
          Length = 311

 Score = 42.2 bits (97), Expect = 0.066,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 53/180 (29%), Gaps = 12/180 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVR 57
            ++  +    +LLFSGG+DS T +  A   F         L  D G      +E R  + 
Sbjct: 30  REVQAQFEKPVLLFSGGKDSITLVRLAQKAFYPAKIPFPLLHIDTGHNFPETIEFRDRLA 89

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           K++          L   ++      G +   S        +Q   L +          + 
Sbjct: 90  KELGV-------ELIVRNVQDNIDSGRVKEESGRYASRNMLQTETLLDAIEEFGFDACIG 142

Query: 118 FAATLAYRLGITN-IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
            A     +      I     +       + R +    +   I+LG    V   +    L 
Sbjct: 143 GARRDEEKARAKERIFSVRDDFGQWDEKNQRPEVFDMLNGRIDLGQNVRVFPISNWTELD 202


>gi|67641637|ref|ZP_00440407.1| sulfate adenylyltransferase subunit 2 [Burkholderia mallei GB8
           horse 4]
 gi|226198918|ref|ZP_03794481.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei Pakistan 9]
 gi|237812873|ref|YP_002897324.1| sulfate adenylyltransferase subunit 2 [Burkholderia pseudomallei
           MSHR346]
 gi|242317265|ref|ZP_04816281.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei 1106b]
 gi|251766953|ref|ZP_02265473.2| sulfate adenylyltransferase, subunit 2 [Burkholderia mallei PRL-20]
 gi|254177570|ref|ZP_04884225.1| sulfate adenylyltransferase, subunit 2 [Burkholderia mallei ATCC
           10399]
 gi|254184444|ref|ZP_04891034.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei 1655]
 gi|254260717|ref|ZP_04951771.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei 1710a]
 gi|160698609|gb|EDP88579.1| sulfate adenylyltransferase, subunit 2 [Burkholderia mallei ATCC
           10399]
 gi|184214975|gb|EDU12018.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei 1655]
 gi|225929018|gb|EEH25042.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei Pakistan 9]
 gi|237506563|gb|ACQ98881.1| sulfate adenylyltransferase subunit 2 [Burkholderia pseudomallei
           MSHR346]
 gi|238522590|gb|EEP86033.1| sulfate adenylyltransferase subunit 2 [Burkholderia mallei GB8
           horse 4]
 gi|242140504|gb|EES26906.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei 1106b]
 gi|243064288|gb|EES46474.1| sulfate adenylyltransferase, subunit 2 [Burkholderia mallei PRL-20]
 gi|254219406|gb|EET08790.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei 1710a]
          Length = 301

 Score = 42.2 bits (97), Expect = 0.066,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 51/195 (26%), Gaps = 19/195 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF---------DRVETLSFDYGQRNKVELE 51
           + +++ +     LLFSGG+DS   L  AL  F              +  D G      ++
Sbjct: 15  LRELVAECSKPALLFSGGKDSVVVLHLALKAFGLGANRRTTLPFPLVHIDTGHNYDEVID 74

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
            R    K+I          L   H+      G +     T +         L      G 
Sbjct: 75  FRDRRAKQIGA-------ELVVGHVEDSIARGTVVLRRETDSRNAAQAVTLLETIERHGY 127

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
             +                I     E         R +        ++ G    V    P
Sbjct: 128 TAMIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHRGEHLRV---FP 184

Query: 172 LMWLKKYETWKLAQD 186
           +    + + W+    
Sbjct: 185 ISNWTELDVWQYIAR 199


>gi|163849073|ref|YP_001637117.1| argininosuccinate synthase [Chloroflexus aurantiacus J-10-fl]
 gi|222527044|ref|YP_002571515.1| argininosuccinate synthase [Chloroflexus sp. Y-400-fl]
 gi|163670362|gb|ABY36728.1| Argininosuccinate synthase [Chloroflexus aurantiacus J-10-fl]
 gi|222450923|gb|ACM55189.1| Argininosuccinate synthase [Chloroflexus sp. Y-400-fl]
          Length = 449

 Score = 42.2 bits (97), Expect = 0.066,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  + W   +       + + GQ ++ + E              +  D
Sbjct: 16 IAFSGGLDTSAAIHWMRAKGAIPYAYTANLGQPDEPDYEDIPRRALMYGAEAARLID 72


>gi|224283258|ref|ZP_03646580.1| argininosuccinate synthase [Bifidobacterium bifidum NCIMB 41171]
 gi|310287618|ref|YP_003938876.1| Argininosuccinate synthase [Bifidobacterium bifidum S17]
 gi|311064530|ref|YP_003971255.1| argininosuccinate synthase ArgG [Bifidobacterium bifidum PRL2010]
 gi|313140405|ref|ZP_07802598.1| argininosuccinate synthase [Bifidobacterium bifidum NCIMB 41171]
 gi|309251554|gb|ADO53302.1| Argininosuccinate synthase [Bifidobacterium bifidum S17]
 gi|310866849|gb|ADP36218.1| ArgG Argininosuccinate synthase [Bifidobacterium bifidum PRL2010]
 gi|313132915|gb|EFR50532.1| argininosuccinate synthase [Bifidobacterium bifidum NCIMB 41171]
          Length = 412

 Score = 42.2 bits (97), Expect = 0.067,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQ 44
          +      +L +SGG D+S  + +  DR    V  +S D GQ
Sbjct: 1  MADNNRIVLAYSGGLDTSVAIPYLKDRTGKDVVAVSLDVGQ 41


>gi|167755465|ref|ZP_02427592.1| hypothetical protein CLORAM_00979 [Clostridium ramosum DSM 1402]
 gi|237733693|ref|ZP_04564174.1| argininosuccinate synthase [Mollicutes bacterium D7]
 gi|167704404|gb|EDS18983.1| hypothetical protein CLORAM_00979 [Clostridium ramosum DSM 1402]
 gi|229383291|gb|EEO33382.1| argininosuccinate synthase [Coprobacillus sp. D7]
          Length = 404

 Score = 42.2 bits (97), Expect = 0.067,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 55/212 (25%), Gaps = 24/212 (11%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L +SGG D++  + W  + +   V     D GQ    E    L  R K      
Sbjct: 2   MKEKVILAYSGGLDTTAIIPWLKENYDYEVICCCIDVGQ---AEELNGLEERAKACGATK 58

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            +  ++ ++++                 V                   +       +A +
Sbjct: 59  LYIKNVVDEYVKDYI----------MPTVQADAVFEYKYLLGTATARPLIAKILVDVARQ 108

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G T I  G                  A +  I              M  ++ E      
Sbjct: 109 EGATAICHGATGKGNDQIRFELGIKALAPDLKIIAAWRDPKWN----MDSRESEI----- 159

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
           +      +NL    + + Y   R+  +    G
Sbjct: 160 EYCQAHGINLPFS-ADSSYSRDRNIWHISHEG 190


>gi|281492046|ref|YP_003354026.1| GMP synthase [Lactococcus lactis subsp. lactis KF147]
 gi|161702166|gb|ABX75631.1| GMP synthase (glutamine-hydrolyzing) [Lactococcus lactis subsp.
           lactis KF147]
          Length = 513

 Score = 42.2 bits (97), Expect = 0.067,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++ ++  D+G   K E      V + +       
Sbjct: 219 KKVLLGLSGGVDSSVVGVLLQRAIGDQLTSIFVDHGFLRKGE---ADQVMETLGGKFGLN 275

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         ++G         +   K +       +V       L          G
Sbjct: 276 IIKVDAQKRFMDKLVG-------LSDPETKRKIIGNEFVYVFDDEANKL---------EG 319

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L   +
Sbjct: 320 VDFLAQGTLYTDVIESGTDTAQTIKSHHNVGGLPEDMQFQLIEPLNTLFKDEVRALGTQL 379

Query: 188 GGQDLV 193
           G  D +
Sbjct: 380 GMPDEI 385


>gi|270308142|ref|YP_003330200.1| GMP synthase (glutamine-hydrolysing) [Dehalococcoides sp. VS]
 gi|270154034|gb|ACZ61872.1| GMP synthase (glutamine-hydrolysing) [Dehalococcoides sp. VS]
          Length = 560

 Score = 42.2 bits (97), Expect = 0.067,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 58/185 (31%), Gaps = 17/185 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DS+   S       +++  +  + G   + E +  L V K  + +   + D
Sbjct: 265 VICALSGGVDSAVVASLIHKAIGEQLTCIYVNNGLLRREEADRTLHVFKNHMGMKIIYVD 324

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           ++       L  LG ++     + V          +       I FL             
Sbjct: 325 AVDRF----LEGLGGVTDPEQKRKVIGSEFIKVFEDEACKLGTIDFLAQGT--------- 371

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
              +     +           I++      L     + +  PL +L K E   L +++G 
Sbjct: 372 ---LYPDVIESVSSVSKASAKIKSHHNVGGLPAHMKLKLIEPLRYLFKDEVRLLGKELGL 428

Query: 190 QDLVN 194
            D + 
Sbjct: 429 PDEMI 433


>gi|125623845|ref|YP_001032328.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Lactococcus lactis subsp. cremoris MG1363]
 gi|146345430|sp|Q9Z6H4|GUAA_LACLM RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|124492653|emb|CAL97602.1| GMP synthase [Lactococcus lactis subsp. cremoris MG1363]
 gi|300070612|gb|ADJ60012.1| GMP synthase [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 513

 Score = 42.2 bits (97), Expect = 0.067,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++ ++  D+G   K E      V + +       
Sbjct: 219 KKVLLGLSGGVDSSVVGVLLQRAIGDQLTSIFVDHGFLRKGE---ADQVMETLGGKFGLN 275

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         ++G         +   K +       +V       L          G
Sbjct: 276 IIKVDAQKRFMDKLVG-------LSDPETKRKIIGNEFVYVFDDEANKL---------EG 319

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L   +
Sbjct: 320 VDFLAQGTLYTDVIESGTDTAQTIKSHHNVGGLPEDMQFQLIEPLNTLFKDEVRALGTQL 379

Query: 188 GGQDLV 193
           G  D +
Sbjct: 380 GMPDEI 385


>gi|15673468|ref|NP_267642.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Lactococcus lactis subsp. lactis Il1403]
 gi|13627131|sp|Q9CFJ0|GUAA_LACLA RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|12724481|gb|AAK05584.1|AE006379_1 GMP synthase [Lactococcus lactis subsp. lactis Il1403]
 gi|326406956|gb|ADZ64027.1| GMP synthase [Lactococcus lactis subsp. lactis CV56]
          Length = 513

 Score = 42.2 bits (97), Expect = 0.067,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++ ++  D+G   K E      V + +       
Sbjct: 219 KKVLLGLSGGVDSSVVGVLLQRAIGDQLTSIFVDHGFLRKGE---ADQVMETLGGKFGLN 275

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         ++G         +   K +       +V       L          G
Sbjct: 276 IIKVDAQKRFMDKLVG-------LSDPETKRKIIGNEFVYVFDDEANKL---------EG 319

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L   +
Sbjct: 320 VDFLAQGTLYTDVIESGTDTAQTIKSHHNVGGLPEDMQFQLIEPLNTLFKDEVRALGTQL 379

Query: 188 GGQDLV 193
           G  D +
Sbjct: 380 GMPDEI 385


>gi|86146872|ref|ZP_01065191.1| Cell cycle protein MesJ [Vibrio sp. MED222]
 gi|85835324|gb|EAQ53463.1| Cell cycle protein MesJ [Vibrio sp. MED222]
          Length = 448

 Score = 42.2 bits (97), Expect = 0.067,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 17/54 (31%), Gaps = 4/54 (7%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALD----RFDRVETLSFDYGQRNKVELECRLCV 56
          K    ++ FSGG DS   L  A             +   +G     +L    C 
Sbjct: 18 KPRRLVVAFSGGVDSRVLLELAAKYAKSHHIECCAVHVHHGLSKNADLWAEQCQ 71


>gi|116512291|ref|YP_809507.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Lactococcus lactis subsp. cremoris SK11]
 gi|123320327|sp|Q02Y87|GUAA_LACLS RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|116107945|gb|ABJ73085.1| GMP synthase (glutamine-hydrolyzing) [Lactococcus lactis subsp.
           cremoris SK11]
          Length = 513

 Score = 42.2 bits (97), Expect = 0.067,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++ ++  D+G   K E      V + +       
Sbjct: 219 KKVLLGLSGGVDSSVVGVLLQRAIGDQLTSIFVDHGFLRKGE---ADQVMETLGGKFGLN 275

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         ++G         +   K +       +V       L          G
Sbjct: 276 IIKVDAQKRFMDKLVG-------LSDPETKRKIIGNEFVYVFDDEANKL---------EG 319

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L   +
Sbjct: 320 VDFLAQGTLYTDVIESGTDTAQTIKSHHNVGGLPEDMQFQLIEPLNTLFKDEVRALGTQL 379

Query: 188 GGQDLV 193
           G  D +
Sbjct: 380 GMPDEI 385


>gi|295425684|ref|ZP_06818371.1| GMP synthase [Lactobacillus amylolyticus DSM 11664]
 gi|295064700|gb|EFG55621.1| GMP synthase [Lactobacillus amylolyticus DSM 11664]
          Length = 494

 Score = 42.2 bits (97), Expect = 0.068,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 1/52 (1%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKK 59
              +L  SGG DSS   +        ++  +  D+G   K E +  +    K
Sbjct: 200 KKVILGLSGGVDSSVTATLLHKAIGQQLTCIFVDHGMLRKDEGDQVMKALNK 251


>gi|255075315|ref|XP_002501332.1| asparagine synthase [Micromonas sp. RCC299]
 gi|226516596|gb|ACO62590.1| asparagine synthase [Micromonas sp. RCC299]
          Length = 662

 Score = 42.2 bits (97), Expect = 0.068,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 48/192 (25%), Gaps = 13/192 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRV-------ETLS-FDYGQRNKVELECR 53
           N ++   P A+ L SGG DSS   S A+             E +  F  G +   +L   
Sbjct: 234 NRLMADVPYAV-LLSGGLDSSLITSIAVRHKKESKNTFGADEPVHSFSIGIKGAPDLIAA 292

Query: 54  LCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
             V   +  +  +      E+ +  L  +  + H    + V   +    L          
Sbjct: 293 RKVADALGTVHHEI-HFTPEEALDALPDI--VWHLETFEQVRASVPMYLLSRAIKSYGFK 349

Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
           + L          G                   R  T       +     +         
Sbjct: 350 MVLSGEGAD-ELFGGYLYFHKAPSAAEFHKECARKTTRLHQWDVLRANKSTMAWGIEVRT 408

Query: 174 WLKKYETWKLAQ 185
            L   +    A 
Sbjct: 409 PLLSQQVCDYAM 420


>gi|118589178|ref|ZP_01546585.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Stappia aggregata IAM 12614]
 gi|118438507|gb|EAV45141.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Stappia aggregata IAM 12614]
          Length = 523

 Score = 42.2 bits (97), Expect = 0.068,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 53/187 (28%), Gaps = 17/187 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS       +   D++  +  D+G     E         ++V +    
Sbjct: 226 KKVICGLSGGVDSSVAAVLIHEAIGDQLTCVFVDHGLLRLNE-------ADEVVSMFRDN 278

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +            LG++   S  +          +                    +   
Sbjct: 279 YNIPLIHADESELFLGELDGVSDPET------KRKIIGKLFIDVFQKHANEIEGAEFLAQ 332

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            T     +    +SG P      I++      L  +  + +  PL  L K E   L +++
Sbjct: 333 GTLYPDVIESVSFSGGPSVT---IKSHHNVGGLPEKMGLKLVEPLRELFKDEVRALGREL 389

Query: 188 GGQDLVN 194
           G  +   
Sbjct: 390 GLPEKFI 396


>gi|260904812|ref|ZP_05913134.1| argininosuccinate synthase [Brevibacterium linens BL2]
          Length = 489

 Score = 42.2 bits (97), Expect = 0.068,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 28/57 (49%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  ++W   +     T + D GQ ++ +LE      K+    + ++ D
Sbjct: 32 IAFSGGLDTSCAVAWMRHKGAIPCTYTADIGQYDEPDLESVTERAKEYGAEIARFVD 88


>gi|598249|gb|AAB59098.1| argininosuccinate synthase [Lactococcus lactis]
          Length = 61

 Score = 42.2 bits (97), Expect = 0.068,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 16/36 (44%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
              +L +SGG D+S  + W  D+   V     D G
Sbjct: 3  NKKIVLAYSGGLDTSVAVKWLTDKGFDVIAACMDVG 38


>gi|310827767|ref|YP_003960124.1| argininosuccinate synthase [Eubacterium limosum KIST612]
 gi|308739501|gb|ADO37161.1| argininosuccinate synthase [Eubacterium limosum KIST612]
          Length = 413

 Score = 42.2 bits (97), Expect = 0.068,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCV 56
          A   +L +SGG D++T + W  + +   V  +  D GQ  + E      +
Sbjct: 3  AKKVILAYSGGLDTTTIIPWLKETYDYEVICVCVDVGQGKETEGLEERAL 52


>gi|255319147|ref|ZP_05360365.1| sulfate adenylyltransferase subunit 2 [Acinetobacter radioresistens
           SK82]
 gi|262379279|ref|ZP_06072435.1| sulfate adenylyltransferase subunit 2 [Acinetobacter radioresistens
           SH164]
 gi|255303793|gb|EET82992.1| sulfate adenylyltransferase subunit 2 [Acinetobacter radioresistens
           SK82]
 gi|262298736|gb|EEY86649.1| sulfate adenylyltransferase subunit 2 [Acinetobacter radioresistens
           SH164]
          Length = 307

 Score = 42.2 bits (97), Expect = 0.068,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 55/176 (31%), Gaps = 13/176 (7%)

Query: 12  LLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++L+S G+DS+  L  A+  F         L  D G + +  ++ R  + KK+   +   
Sbjct: 36  VMLYSIGKDSAVMLHLAMKAFYPAKLPFPLLHVDTGWKFRAMIKFRDEMAKKLGLDLIVH 95

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           ++  G D  +     G   ++ + K   +K   +        G                 
Sbjct: 96  QNKEGRDAGINPFDQGSSKYTDIMKTQGLKQALDKYQFDAAFGGARRD------EEKSRA 149

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
              +             + R +        +N G    V    PL    + + W+ 
Sbjct: 150 KERVYSFRDSKHRWDPKNQRPELWNIYNGKVNKGESIRV---FPLSNWTELDIWQY 202


>gi|261414559|ref|YP_003248242.1| sulfate adenylyltransferase, small subunit [Fibrobacter
           succinogenes subsp. succinogenes S85]
 gi|261371015|gb|ACX73760.1| sulfate adenylyltransferase, small subunit [Fibrobacter
           succinogenes subsp. succinogenes S85]
 gi|302326873|gb|ADL26074.1| sulfate adenylyltransferase, subunit 2 [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 299

 Score = 42.2 bits (97), Expect = 0.068,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 55/183 (30%), Gaps = 16/183 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIV-EL 63
              ++L+S G+DSS  L  A+  F         L  +   + +  +E R    +K+  E+
Sbjct: 26  EKPVMLYSIGKDSSVMLHLAIKAFYPEKPPFPFLHVNTTWKFREMIEFRDRTAQKLGIEM 85

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +        +  I P       +    T+ +   +        F  GR            
Sbjct: 86  LEYINQDGVKQGINPFDHGAAYTDIMKTQALKQALNKYGFTAAFGGGRRD--------EE 137

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
                  I             + R +  +   T IN G    V    P+    + + W+ 
Sbjct: 138 KSRAKERIFSFRNSAHAWDPKNQRPEMWKLYNTKINKGESIRV---FPISNWTEKDIWQY 194

Query: 184 AQD 186
            + 
Sbjct: 195 IKR 197


>gi|256851985|ref|ZP_05557372.1| GMP synthase domain-containing protein [Lactobacillus jensenii
           27-2-CHN]
 gi|260661445|ref|ZP_05862358.1| GMP synthase domain-containing protein [Lactobacillus jensenii
           115-3-CHN]
 gi|282931707|ref|ZP_06337195.1| GMP synthase (glutamine-hydrolyzing) [Lactobacillus jensenii 208-1]
 gi|297205144|ref|ZP_06922540.1| GMP synthase (glutamine-hydrolyzing) [Lactobacillus jensenii
           JV-V16]
 gi|256615397|gb|EEU20587.1| GMP synthase domain-containing protein [Lactobacillus jensenii
           27-2-CHN]
 gi|260547900|gb|EEX23877.1| GMP synthase domain-containing protein [Lactobacillus jensenii
           115-3-CHN]
 gi|281304150|gb|EFA96264.1| GMP synthase (glutamine-hydrolyzing) [Lactobacillus jensenii 208-1]
 gi|297149722|gb|EFH30019.1| GMP synthase (glutamine-hydrolyzing) [Lactobacillus jensenii
           JV-V16]
          Length = 516

 Score = 42.2 bits (97), Expect = 0.068,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 55/185 (29%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +L  SGG DSS   +       +++  +  D+G    +  +    V + +   +    
Sbjct: 223 KVILGLSGGVDSSVTATLLHKAIGNQLTAIFVDHG---LLRKDEAKQVMEALNRDLGVNI 279

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             +       L  L  ++     + +                      VF        G+
Sbjct: 280 IKVDAQKRF-LDKLKGVTEPEQKRKI---------------IGKEFIEVFNEEAKKLDGV 323

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G   TD          TI++      L  +    +  PL  L K E  +L + +G
Sbjct: 324 KFLAQGTLYTDVIESGTKTAQTIKSHHNVGGLPKDLGFELVEPLRKLFKDEVRELGEKLG 383

Query: 189 GQDLV 193
               +
Sbjct: 384 IPHEL 388


>gi|225025729|ref|ZP_03714921.1| hypothetical protein EIKCOROL_02633 [Eikenella corrodens ATCC
           23834]
 gi|224941510|gb|EEG22719.1| hypothetical protein EIKCOROL_02633 [Eikenella corrodens ATCC
           23834]
          Length = 522

 Score = 42.2 bits (97), Expect = 0.068,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 52/181 (28%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D+G    + L     V K   + +     
Sbjct: 221 VILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHG---LLRLNEAENVMKMFADNLGVRVI 277

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +         + G        K +  +  +                      A  L   
Sbjct: 278 HVDASEQFMAKLAGVTDPEQKRKIIGAEFIEVFDAEE-----------KKLANAKWLAQG 326

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  +         I++      L     + +  PL  L K E  +L   +G 
Sbjct: 327 TIYPDVIESAGAKTKKAHA--IKSHHNVGGLPENMKLKLLEPLRDLFKDEVRELGVALGL 384

Query: 190 Q 190
            
Sbjct: 385 P 385


>gi|189426268|ref|YP_001953445.1| thiamine biosynthesis protein [Geobacter lovleyi SZ]
 gi|189422527|gb|ACD96925.1| thiamine biosynthesis protein [Geobacter lovleyi SZ]
          Length = 333

 Score = 42.2 bits (97), Expect = 0.068,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
              AL LFSGG DS   +     +   V  ++F
Sbjct: 1  MQRRALALFSGGLDSILAVKVIQQQGIDVLAINF 34


>gi|219847362|ref|YP_002461795.1| argininosuccinate synthase [Chloroflexus aggregans DSM 9485]
 gi|219541621|gb|ACL23359.1| Argininosuccinate synthase [Chloroflexus aggregans DSM 9485]
          Length = 449

 Score = 42.2 bits (97), Expect = 0.068,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  + W   +       + + GQ ++ + E              +  D
Sbjct: 16 IAFSGGLDTSAAIHWMRAKGAIPYAYTANLGQPDEPDYEDIPRRALLYGAEAARLID 72


>gi|99014555|emb|CAK22274.1| putative GMP synthase [Chenopodium rubrum]
          Length = 284

 Score = 42.2 bits (97), Expect = 0.068,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 18/51 (35%), Gaps = 1/51 (1%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELEC 52
           + +      +   SGG DS+   +       DR+  +  D G     E E 
Sbjct: 193 ETVGPDDHVICALSGGVDSTVAATLVHKAIGDRLHCIFVDNGLLRYKERER 243


>gi|307711102|ref|ZP_07647524.1| argininosuccinate synthase [Streptococcus mitis SK321]
 gi|307617064|gb|EFN96242.1| argininosuccinate synthase [Streptococcus mitis SK321]
          Length = 398

 Score = 42.2 bits (97), Expect = 0.069,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 49/188 (26%), Gaps = 16/188 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               +L +SGG D+S  ++W       V  +  D G     +L+       K+       
Sbjct: 3   KEKVILAYSGGLDTSVAITWLKKD-YEVVAVCMDVG--EGKDLDFIHDKALKVGA----- 54

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-LAYRL 126
                E +++ +    D   +                   V   +   +      +A++ 
Sbjct: 55  ----VESYVIDV---KDEFATDYVLVALQSHAYYEQKYPLVSALSRPLISKKLVEIAHQT 107

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G T I  G                       +   +          +   K     +  D
Sbjct: 108 GATTIAHGCTGKGNDQVRFEVSIAALDPNLKVIAPVREWKWSREEEIHYAKENGVPVPAD 167

Query: 187 IGGQDLVN 194
           +G    V+
Sbjct: 168 LGNPYSVD 175


>gi|294894436|ref|XP_002774832.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239880503|gb|EER06648.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 468

 Score = 42.2 bits (97), Expect = 0.069,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 63/193 (32%), Gaps = 11/193 (5%)

Query: 13  LLFSGGQDSSTCLSWALDRFDR-VETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           +LFSGG DS+T  + AL+  DR V+ L+      +  +L   L   +++ E+  + +  L
Sbjct: 52  ILFSGGVDSTTLAALALEESDRQVDLLTASVDGEDSPDLRTALVSYRRLAEVYGRARVRL 111

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
                +     G +            I       ++     +I L + ++   + G    
Sbjct: 112 I-LCGIDANDKGGL------TRELRLIAARTRQESYFGMAKLIALHYRSSSPQQTGKWRT 164

Query: 132 VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET-WKLAQDIGGQ 190
            +        G    R     A         + +  ++       K    WK+     G 
Sbjct: 165 EVQRVVRLDGGSYHDREQEKAAPGMPGKRIRQHNGELNNGGAHRTKRHRPWKMLLVCYGF 224

Query: 191 --DLVNLILEESH 201
              +  L  E + 
Sbjct: 225 SSQVQALQFEWTW 237


>gi|91773400|ref|YP_566092.1| hypothetical protein Mbur_1431 [Methanococcoides burtonii DSM
          6242]
 gi|91712415|gb|ABE52342.1| ATPase of the PP-loop superfamily [Methanococcoides burtonii DSM
          6242]
          Length = 267

 Score = 42.2 bits (97), Expect = 0.069,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 25/78 (32%), Gaps = 1/78 (1%)

Query: 5  IKKAPSALLLFSGGQDSST-CLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
          I K    L+ FSGG DSST          D    ++       + ELE      + I   
Sbjct: 14 IAKKEKVLVAFSGGVDSSTLAALAFAALGDNALAVTLYSPMIPQSELEYAKRTAEVIGIK 73

Query: 64 MPKWKDSLGEDHILPLAI 81
                 +  D  + +  
Sbjct: 74 HIVLDHDILSDERIRIND 91


>gi|85710077|ref|ZP_01041142.1| GMP synthase [Erythrobacter sp. NAP1]
 gi|85688787|gb|EAQ28791.1| GMP synthase [Erythrobacter sp. NAP1]
          Length = 524

 Score = 42.2 bits (97), Expect = 0.069,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 52/183 (28%), Gaps = 17/183 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+       +   D++  +  D+G     E E              +  
Sbjct: 228 RVICGLSGGVDSAVAAVLIHEAIGDQLTCVYVDHGLMRLNETE--------------QVV 273

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               + + +PL  +                +                       A  L  
Sbjct: 274 SLFRDHYNIPLIAVDAEETFLAGLAGVTDPEKKRKFIGGAFIDLFEAEAKKVGGADFLAQ 333

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+    +      TI++      L    ++ +  PL  L K E  +L +++G
Sbjct: 334 GTLYPDVIESV--SFTGGPSVTIKSHHNVGGLPERMNMELVEPLRELFKDEVRELGRELG 391

Query: 189 GQD 191
             +
Sbjct: 392 LPE 394


>gi|325698021|gb|EGD39902.1| tRNA(Ile)-lysidine synthetase [Streptococcus sanguinis SK160]
          Length = 425

 Score = 42.2 bits (97), Expect = 0.069,   Method: Composition-based stats.
 Identities = 22/194 (11%), Positives = 55/194 (28%), Gaps = 14/194 (7%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRV---ETL-SFDYGQRNKV--ELECRLCVRKKIV 61
               L+  SGG DS T L   +D    +     +   ++ QR +   E +  + + +++ 
Sbjct: 19  HRKVLIAVSGGLDSMTLLQLLIDSQKELDIELAIAHVNHKQRPESDQEEKALVKIAEQLG 78

Query: 62  E------LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
                      + ++              +     T  V     D+     F+       
Sbjct: 79  VKIFTSSFSGNFSENAARQFRYDF-FEKVMQEEHYTALVTAHHADDQAETVFMRLLRGAR 137

Query: 116 LVFAATL-AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMW 174
           L   + + A +      +I    T +            +     +        ++ P + 
Sbjct: 138 LRHLSGMKAVQSFACGELIRPLFTFHKSDFPDIQHFEDSSNFQNDYLRNRIRNLYLPNLE 197

Query: 175 LKKYETWKLAQDIG 188
            +  +     + +G
Sbjct: 198 KENPQIKDSLRYLG 211


>gi|258545827|ref|ZP_05706061.1| GMP synthase (glutamine-hydrolyzing) [Cardiobacterium hominis ATCC
           15826]
 gi|258518843|gb|EEV87702.1| GMP synthase (glutamine-hydrolyzing) [Cardiobacterium hominis ATCC
           15826]
          Length = 525

 Score = 42.2 bits (97), Expect = 0.069,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 59/182 (32%), Gaps = 18/182 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D+G     E +           +M  +  
Sbjct: 224 VILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHGLLRLNEAKS----------VMQMFAR 273

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
           +LG + I   A    ++  +   +   K +        V  R           A    + 
Sbjct: 274 NLGVNVIHVDASADFMAKLAGVTDPEQKRKIIGAEFVEVFQREAGK------RANARWLA 327

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
              I     + +G    +   I++      L    ++ +  PL  L K E  +L   +G 
Sbjct: 328 QGTIYPDVIESAGAKTKKAHAIKSHHNVGGLPETLNLKLLEPLRDLFKDEVRELGVALGL 387

Query: 190 QD 191
             
Sbjct: 388 PH 389


>gi|169629428|ref|YP_001703077.1| argininosuccinate synthase [Mycobacterium abscessus ATCC 19977]
 gi|169241395|emb|CAM62423.1| Argininosuccinate synthase ArgG [Mycobacterium abscessus]
          Length = 404

 Score = 42.2 bits (97), Expect = 0.069,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 18/52 (34%), Gaps = 1/52 (1%)

Query: 8  APSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
          +   +L +SGG D S        +    V  ++ D GQ  +     R     
Sbjct: 6  SDRVILAYSGGLDTSVAISWIGKETGREVVAVAIDLGQGGEDMEVVRQRALD 57


>gi|86605422|ref|YP_474185.1| argininosuccinate synthase [Synechococcus sp. JA-3-3Ab]
 gi|119361333|sp|Q2JWE1|ASSY_SYNJA RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|86553964|gb|ABC98922.1| argininosuccinate synthase [Synechococcus sp. JA-3-3Ab]
          Length = 403

 Score = 42.2 bits (97), Expect = 0.069,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 58/188 (30%), Gaps = 23/188 (12%)

Query: 5   IKKAPSALLLFSGGQDSSTCL-SWALDRFDR-VETLSFDYGQRNKVELECRLCVRKKIVE 62
           + +A   +L +SGG D+S C+     +     V TL+ D GQ  ++E      +R     
Sbjct: 1   MGRAKKVVLAYSGGVDTSVCIPYLKHEWGVESVVTLAVDLGQGAELEAIQAKALRA---- 56

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     E  ++  A+   I+  +     A  + +   P +    R +I  +     
Sbjct: 57  --------GAEQSLVREAVQTLIADYAFPAIQANALYEQRYPLSTALARPLIAQLLVEV- 107

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
           A  +G   +  G                         L  +  V        + + ET  
Sbjct: 108 AEEVGADAVAHGCTGKGNDQVRFD--------LAIAALNPKLKVLAPAREWGMTREETIA 159

Query: 183 LAQDIGGQ 190
             +  G  
Sbjct: 160 YGERYGIP 167


>gi|54024424|ref|YP_118666.1| sulfate adenylyltransferase subunit 2 [Nocardia farcinica IFM
           10152]
 gi|54015932|dbj|BAD57302.1| putative sulfate adenylyltransferase subunit 2 [Nocardia farcinica
           IFM 10152]
          Length = 310

 Score = 42.2 bits (97), Expect = 0.069,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 49/183 (26%), Gaps = 17/183 (9%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVET----LSFDYGQRNKVELECRLCVRKKIV--ELMP 65
           +LLFSGG+DS   L  A   F         L  D G      +E R    +++    L+ 
Sbjct: 39  VLLFSGGKDSVVMLHLAAKAFWPAPLPFPVLHIDTGHNFDEVIEFRDRTVERLGLRLLVG 98

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           + +D +    ++         +   T  +   I++      F   R              
Sbjct: 99  RVQDDIDAGRVVEETGPRASRNRLQTATLLRTIREGGFDAVFGGARRD-----------E 147

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                        D  G  + R+                      PL    + + W    
Sbjct: 148 EKARAKERVFSFRDAYGQWEPRNQRPELWNLYNGRHRRGEHIRVFPLSNWTELDIWSYIA 207

Query: 186 DIG 188
             G
Sbjct: 208 AEG 210


>gi|87118609|ref|ZP_01074508.1| cell cycle protein [Marinomonas sp. MED121]
 gi|86166243|gb|EAQ67509.1| cell cycle protein [Marinomonas sp. MED121]
          Length = 434

 Score = 42.2 bits (97), Expect = 0.069,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 20/65 (30%), Gaps = 4/65 (6%)

Query: 15 FSGGQDSSTCLSWALDR--FDRVETLSFDYG--QRNKVELECRLCVRKKIVELMPKWKDS 70
           SGG DS   L   ++     RV+ +   +G  Q           + ++        K  
Sbjct: 31 LSGGVDSVALLHLLVEAGLGHRVKAIHIHHGLSQNADAWYRFCEALCQQYQVAFKGHKVE 90

Query: 71 LGEDH 75
          L    
Sbjct: 91 LDTQK 95


>gi|284161871|ref|YP_003400494.1| PP-loop domain protein [Archaeoglobus profundus DSM 5631]
 gi|284011868|gb|ADB57821.1| PP-loop domain protein [Archaeoglobus profundus DSM 5631]
          Length = 290

 Score = 41.8 bits (96), Expect = 0.070,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 25/78 (32%), Gaps = 5/78 (6%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           I+K +   L+  SGG+DS+       +    +E    D G              K + EL
Sbjct: 42  ILKSSEKILVCVSGGKDSTAMAYALNELDYNIELFHIDLGI-----GNYSKESLKAVEEL 96

Query: 64  MPKWKDSLGEDHILPLAI 81
                 +L    +     
Sbjct: 97  AQTLNLNLNVVKLEDYGF 114


>gi|260598891|ref|YP_003211462.1| GMP synthase [Cronobacter turicensis z3032]
 gi|260218068|emb|CBA32807.1| GMP synthase [glutamine-hydrolyzing] [Cronobacter turicensis z3032]
          Length = 525

 Score = 41.8 bits (96), Expect = 0.070,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 48/184 (26%), Gaps = 17/184 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS           DR+  +  D G    + L     V     +    
Sbjct: 227 NDRVILGLSGGVDSSVTAMLLHRAIGDRLTCVFVDNG---LLRLNEAEQVMDMFGDHFGL 283

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +  +     A+ G     +  K +     +                          
Sbjct: 284 NIVHVPAEARFLDALAGIDEPEAKRKTIGRVFVEVFDEEALKLEDVKWLAQGT------- 336

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                 I     + +     +   I++      L  E  + +  PL  L K E  K+  +
Sbjct: 337 ------IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLE 390

Query: 187 IGGQ 190
           +G  
Sbjct: 391 LGLP 394


>gi|242280581|ref|YP_002992710.1| hypothetical protein Desal_3120 [Desulfovibrio salexigens DSM
          2638]
 gi|242123475|gb|ACS81171.1| conserved hypothetical protein [Desulfovibrio salexigens DSM
          2638]
          Length = 349

 Score = 41.8 bits (96), Expect = 0.070,   Method: Composition-based stats.
 Identities = 14/36 (38%), Positives = 17/36 (47%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
          + K   AL LFSGG DS        D+  +V  L F
Sbjct: 1  MNKQYDALALFSGGLDSILACKVIQDQGLKVLGLHF 36


>gi|254780999|ref|YP_003065412.1| NAD synthetase [Candidatus Liberibacter asiaticus str. psy62]
 gi|254040676|gb|ACT57472.1| NAD synthetase [Candidatus Liberibacter asiaticus str. psy62]
          Length = 562

 Score = 41.8 bits (96), Expect = 0.070,   Method: Composition-based stats.
 Identities = 20/146 (13%), Positives = 41/146 (28%), Gaps = 3/146 (2%)

Query: 10  SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
             ++  SGG DS+ C + A+D    + V+T+   Y   +   LE      K +       
Sbjct: 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVL 353

Query: 68  KDSLGEDHILPL-AILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 +H   L +       S +           N+          + L  +      +
Sbjct: 354 PIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISV 413

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIR 152
           G   +   +           +    +
Sbjct: 414 GYGTLYGDMSGGFNPLKDLYKTQVFQ 439


>gi|167830120|ref|ZP_02461591.1| sulfate adenylyltransferase subunit 2 [Burkholderia pseudomallei 9]
          Length = 227

 Score = 41.8 bits (96), Expect = 0.070,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 46/183 (25%), Gaps = 19/183 (10%)

Query: 13  LLFSGGQDSSTCLSWALDRF---------DRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           LLFSGG+DS   L  AL  F              +  D G      ++ R    K+I   
Sbjct: 12  LLFSGGKDSVVVLHLALKAFGLGANRRTTLPFPLVHIDTGHNYDEVIDFRDRRAKQIGA- 70

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                  L   H+      G +     T +         L      G   +         
Sbjct: 71  ------ELVVGHVEDSIARGTVVLRRETDSRNAAQAVTLLETIERHGYTAMIGGARRDEE 124

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
                  I     E         R +        ++ G    V    P+    + + W+ 
Sbjct: 125 KARAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHRGEHLRV---FPISNWTELDVWQY 181

Query: 184 AQD 186
              
Sbjct: 182 IAR 184


>gi|156932952|ref|YP_001436868.1| GMP synthase [Cronobacter sakazakii ATCC BAA-894]
 gi|226738454|sp|A7MGU1|GUAA_ENTS8 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|156531206|gb|ABU76032.1| hypothetical protein ESA_00755 [Cronobacter sakazakii ATCC BAA-894]
          Length = 525

 Score = 41.8 bits (96), Expect = 0.070,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 48/184 (26%), Gaps = 17/184 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS           DR+  +  D G    + L     V     +    
Sbjct: 227 NDRVILGLSGGVDSSVTAMLLHRAIGDRLTCVFVDNG---LLRLNEAEQVMDMFGDHFGL 283

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +  +     A+ G     +  K +     +                          
Sbjct: 284 NIVHVPAEARFLDALAGIDEPEAKRKTIGRVFVEVFDEEALKLEDVKWLAQGT------- 336

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                 I     + +     +   I++      L  E  + +  PL  L K E  K+  +
Sbjct: 337 ------IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLE 390

Query: 187 IGGQ 190
           +G  
Sbjct: 391 LGLP 394


>gi|332993958|gb|AEF04013.1| asparagine synthetase B [Alteromonas sp. SN2]
          Length = 557

 Score = 41.8 bits (96), Expect = 0.070,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 60/207 (28%), Gaps = 15/207 (7%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALD-------RFDRVET----LS-FDYGQRNKVE 49
           + ++   P A+ L SGG DSS   + A           D+ E     L  F  G     +
Sbjct: 222 SHMMSDVPYAV-LLSGGLDSSLVSAIAAKYVAKRVEDEDKTEAWWPRLHSFAVGLEGAPD 280

Query: 50  LECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP 109
           L+    V   I  +  +      ++ +  +  +     +  T  +        +      
Sbjct: 281 LKAAKKVADMIGTVHHEI-HFTIQEGLDAIRDVIFHLETYDTTTIRAATPMYLMTRKIKA 339

Query: 110 GRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
               + L          G           ++      + D +   + A      S   V 
Sbjct: 340 MGIKMVLSGEGADEIFGGYLYFHKAPNAKEFHEETVRKLDRLHLFDCARANKATSAWGVE 399

Query: 170 TPLMWLKKYETWKLAQDIGGQDLVNLI 196
             + +L K     +A  +  QD + L 
Sbjct: 400 ARVPFLDKNFI-DVAMRLNPQDKMCLD 425


>gi|319900025|ref|YP_004159753.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Bacteroides helcogenes P 36-108]
 gi|319415056|gb|ADV42167.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Bacteroides helcogenes P 36-108]
          Length = 357

 Score = 41.8 bits (96), Expect = 0.070,   Method: Composition-based stats.
 Identities = 10/90 (11%), Positives = 22/90 (24%), Gaps = 3/90 (3%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
          +       L+  SGG DS+        +   +  L+         E      +   +   
Sbjct: 1  MNVFEKRVLVGMSGGIDSTATCLMLKGQGYEIVGLTMWVWGD---EPVEAGQLADSMGIE 57

Query: 64 MPKWKDSLGEDHILPLAILGDISHSSLTKN 93
               +      I+    + + S       
Sbjct: 58 HYIVDERESFRRIIVQNFIDEYSGGRTPNP 87


>gi|320010575|gb|ADW05425.1| argininosuccinate synthase [Streptomyces flavogriseus ATCC 33331]
          Length = 482

 Score = 41.8 bits (96), Expect = 0.070,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 26/57 (45%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  ++W  D+     T + D GQ ++ ++       K     + +  D
Sbjct: 16 IAFSGGLDTSVAVAWMRDKGAVPCTYTADIGQYDEPDIASVPGRAKAYGAEIARLVD 72


>gi|237741464|ref|ZP_04571945.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13]
 gi|260495406|ref|ZP_05815532.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
 gi|294785923|ref|ZP_06751211.1| conserved hypothetical protein [Fusobacterium sp. 3_1_27]
 gi|229429112|gb|EEO39324.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13]
 gi|260196943|gb|EEW94464.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
 gi|294487637|gb|EFG34999.1| conserved hypothetical protein [Fusobacterium sp. 3_1_27]
          Length = 350

 Score = 41.8 bits (96), Expect = 0.070,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 53/191 (27%), Gaps = 23/191 (12%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            ++  SGG DSS  L   + +   +  L+F     +  E E      KK+          
Sbjct: 68  VVVPLSGGVDSSVTLIRIVKK-YNLVPLAFH--NDHGFEDEVATDNVKKLC--------- 115

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITN 130
                IL + ++      +  K +      +   +      +  F+      A  L I N
Sbjct: 116 ----KILDVDLIIKQQDINFMKKL-----FHYTHSMKNRTLSSCFVCGGIIYANALEIAN 166

Query: 131 IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM--WLKKYETWKLAQDIG 188
                   +                  +  G+             ++ K E  K    + 
Sbjct: 167 AFNIPMVINGYSKGQAFMMDNNNDTLELWSGLLEEFQKDENFFKEFMYKQEPMKTQILLK 226

Query: 189 GQDLVNLILEE 199
            ++ +   L +
Sbjct: 227 NKNDLKKPLPK 237


>gi|258655202|ref|YP_003204358.1| asparagine synthase family amidotransferase [Nakamurella
           multipartita DSM 44233]
 gi|258558427|gb|ACV81369.1| asparagine synthase family amidotransferase [Nakamurella
           multipartita DSM 44233]
          Length = 594

 Score = 41.8 bits (96), Expect = 0.070,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 4/59 (6%)

Query: 13  LLFSGGQDSST---CLSWALDRFDRVETLSF-DYGQRNKVELECRLCVRKKIVELMPKW 67
           +L SGG DSS     L+ A     +  ++ F   G R   E E    V K+      K 
Sbjct: 265 VLLSGGIDSSVIVALLADAGQHGLQTFSIGFERVGDREGDEFEFSDIVAKEFDTHHHKL 323


>gi|257790812|ref|YP_003181418.1| ExsB family protein [Eggerthella lenta DSM 2243]
 gi|257474709|gb|ACV55029.1| ExsB family protein [Eggerthella lenta DSM 2243]
          Length = 210

 Score = 41.8 bits (96), Expect = 0.070,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 23/65 (35%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
          + P   + FSGG DSS  L+ AL     V         +   E+E    +  ++      
Sbjct: 21 RTPRLAVAFSGGCDSSFLLAAALRAGCDVRAYGVRTAFQPAFEIEDAQRLAAELGADFEL 80

Query: 67 WKDSL 71
              +
Sbjct: 81 VDADV 85


>gi|159904616|ref|YP_001548278.1| putative ATP binding-like protein [Methanococcus maripaludis C6]
 gi|159886109|gb|ABX01046.1| putative ATP binding related protein [Methanococcus maripaludis C6]
          Length = 291

 Score = 41.8 bits (96), Expect = 0.070,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 41/168 (24%), Gaps = 1/168 (0%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +L FSGG+DS   L   +     R   ++ D G   +  L     V K           
Sbjct: 69  CILGFSGGKDSVVALYLLVKELRIRPLCVTVDNGYLAEEALTNCKNVAKHFGVDWLVINK 128

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              +     ++            N+    Q     N                +       
Sbjct: 129 DFTKFFKETISKGESPCRVCSDMNMHEIWQFARQTNIDTIVTGHELPFGTTAIREMKKGI 188

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
           N++  +     +             E     G  ++  +  P +   K
Sbjct: 189 NMLRLLVAYKLTEEDRYNILKELPWEKPDLGGYTTNCLILAPALVEFK 236


>gi|150400622|ref|YP_001324388.1| ExsB family protein [Methanococcus aeolicus Nankai-3]
 gi|150013325|gb|ABR55776.1| ExsB family protein [Methanococcus aeolicus Nankai-3]
          Length = 279

 Score = 41.8 bits (96), Expect = 0.070,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 51/197 (25%), Gaps = 27/197 (13%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           K  + ++ +SGG DS      A +       ++ D G   K  +       KK       
Sbjct: 26  KDKTVIISYSGGADSLLVAKIASNAAKEHLAITIDNGFFTKQAIINSKIRAKK------- 78

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                    I+ +       ++            NN              +       + 
Sbjct: 79  ---YNINHKIINIDYFNSEFNNKNNNIDINIENINNDLKNRCYYCKKDIALTIKGQLKKY 135

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               IV G   +D                  I    E ++      + + K E +K    
Sbjct: 136 DYDMIVDGTNYSDLFEDRP-----------GIKAYKEQNIKSPLAELHITKKEVFK---- 180

Query: 187 IGGQDLVNLILEESHTC 203
           +     + L  ++  +C
Sbjct: 181 LLDYLDMELPKKD--SC 195


>gi|78188748|ref|YP_379086.1| argininosuccinate synthase [Chlorobium chlorochromatii CaD3]
 gi|119361262|sp|Q3ASI2|ASSY_CHLCH RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|78170947|gb|ABB28043.1| argininosuccinate synthase [Chlorobium chlorochromatii CaD3]
          Length = 399

 Score = 41.8 bits (96), Expect = 0.070,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 2/54 (3%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVR 57
          + K   A+  +SGG D+S  + W  D++D  +  ++ + GQ+ ++E      + 
Sbjct: 1  MSKEKIAIA-YSGGLDTSVMIKWLKDKYDADIVAVTGNLGQQKEIENLESKALA 53


>gi|290994719|ref|XP_002679979.1| asparagine synthase [Naegleria gruberi]
 gi|284093598|gb|EFC47235.1| asparagine synthase [Naegleria gruberi]
          Length = 2089

 Score = 41.8 bits (96), Expect = 0.071,   Method: Composition-based stats.
 Identities = 22/201 (10%), Positives = 51/201 (25%), Gaps = 17/201 (8%)

Query: 13  LLFSGGQDS---STCLSWALDRFDRVETLSFDYGQRNKVELECRLC--VRKKIVELMPKW 67
           +LFSGG DS   +      L++   ++ L+  +G   K + +        +   EL   +
Sbjct: 341 VLFSGGIDSVIITALAHLKLEKGMPIDLLNVSFGVDKKQQDQSADRKQAIESYDELARLY 400

Query: 68  KDSLGEDHILPLAIL----GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
            D      ++ +             SL       I  N     +   R   ++  ++   
Sbjct: 401 PDRPFRLVLVDINSTELAENQKRIESLIYPQNTVIDFNIGSALWFASRGRGYIYNSSEPT 460

Query: 124 YRLGIT-------NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
               +           IG  E         +    +               +    +   
Sbjct: 461 NTSNLYTSTGRVILCGIGSDEQLGGYKRHFKKYKYKGWNGLNEEMDMDIKRLWIRNLGRD 520

Query: 177 KYETWKLAQDIGGQDLVNLIL 197
                   ++      ++   
Sbjct: 521 DRVISDHGRESRNP-FLDEPF 540


>gi|255728377|ref|XP_002549114.1| GMP synthase [Candida tropicalis MYA-3404]
 gi|240133430|gb|EER32986.1| GMP synthase [Candida tropicalis MYA-3404]
          Length = 530

 Score = 41.8 bits (96), Expect = 0.071,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 52/180 (28%), Gaps = 13/180 (7%)

Query: 15  FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
            SGG DS+       +   DR   +  D G   K E E    V+K + +           
Sbjct: 235 VSGGVDSTVGAKIMKEAIGDRFHAIYVDNGVMRKNETES---VKKTLDD------GLGIN 285

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
             ++  + L       +T     +    N                  +    L    +  
Sbjct: 286 LTVVDASELFLGRLKGVTDPEKKRKIIGNTFIHVFEEEAAKIKPHDGSEIEFLLQGTLYP 345

Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
            V E   S        TI+       L  +  + +  PL  L K E   L + +G  + +
Sbjct: 346 DVIE---SISFKGPSQTIKTHHNVGGLLEDMKLKLIEPLRELFKDEVRHLGELLGVPEDL 402


>gi|229495661|ref|ZP_04389390.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Porphyromonas endodontalis ATCC 35406]
 gi|229317431|gb|EEN83335.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Porphyromonas endodontalis ATCC 35406]
          Length = 383

 Score = 41.8 bits (96), Expect = 0.071,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 55/187 (29%), Gaps = 6/187 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +L SGG DSS  +   L    R +      G   + E     C  ++ +E++        
Sbjct: 23  VLASGGVDSSVAVHLLLQAGFRPDLFYIRIGM--EDEEGFIDCPAEEDMEMVTLLARKYQ 80

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
             + + + +  +     +   +    Q        +  + I F VF   + +R       
Sbjct: 81  LHYEV-IDLHKEYWERVVKYTIESVRQGLTPNPDMMCNKLIKFGVFEERVGHRYDYIATG 139

Query: 133 IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV---HTPLMWLKKYETWKLAQDIGG 189
                    G            +    L   +   +     PL  L K +   +A++ G 
Sbjct: 140 HYASTARVDGKTFLATAPDPVKDQTDFLAQINFKQISKLLFPLGCLTKQQVRMVAEEAGL 199

Query: 190 QDLVNLI 196
            +     
Sbjct: 200 ANAHRKD 206


>gi|110597654|ref|ZP_01385939.1| GMP synthase [Chlorobium ferrooxidans DSM 13031]
 gi|110340774|gb|EAT59251.1| GMP synthase [Chlorobium ferrooxidans DSM 13031]
          Length = 513

 Score = 41.8 bits (96), Expect = 0.071,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 56/185 (30%), Gaps = 22/185 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             + +   SGG DS+            ++  +  D G   K E        +K++  +  
Sbjct: 220 KETVICGISGGVDSTVAAVLVSRAIGKQLHCVFVDNGLLRKNE-------AEKVMSFLKP 272

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     + LA   D+  + L    + + +   +  TF+                + 
Sbjct: 273 LGLR------VTLADASDLFLNRLKSVASPEKKRKIIGRTFIQV--------FEEHMNQE 318

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                     +   S       +TI++      L     + +  PL  L K E   + ++
Sbjct: 319 KFLVQGTLYPDVIESVSVKGPSETIKSHHNVGGLPKRMKLKLIEPLRELFKDEVRAVGRE 378

Query: 187 IGGQD 191
           +G  +
Sbjct: 379 LGIAE 383


>gi|83776736|gb|ABC46690.1| mitochondrial
          5-methylaminomethyl-2-thiouridylate-methyltransferase
          precursor transcript variant 1 [Homo sapiens]
 gi|83776738|gb|ABC46691.1| mitochondrial
          5-methylaminomethyl-2-thiouridylate-methyltransferase
          precursor transcript variant 2 [Homo sapiens]
          Length = 99

 Score = 41.8 bits (96), Expect = 0.071,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 13/36 (36%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
          ++     +   SGG DS+        R  +V  +  
Sbjct: 1  MQALRHVVCALSGGVDSAVAALLLRRRGYQVTGVFM 36


>gi|46195775|ref|NP_957457.2| asparagine synthetase [Danio rerio]
 gi|45501119|gb|AAH67140.1| Asparagine synthetase [Danio rerio]
          Length = 560

 Score = 41.8 bits (96), Expect = 0.071,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 18/60 (30%), Gaps = 4/60 (6%)

Query: 13  LLFSGGQDSSTCLSWALDRFDR---VETL-SFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            L SGG DSS   +  +           + +F  G  +  ++     V   I        
Sbjct: 254 CLLSGGLDSSLVAALLVKLAKEEKLPYPIQTFSIGAEDSPDVAAARKVADYIGSEHHVVN 313


>gi|14590933|ref|NP_143006.1| asparagine synthetase [Pyrococcus horikoshii OT3]
 gi|3257518|dbj|BAA30201.1| 480aa long hypothetical asparagine synthetase [Pyrococcus
           horikoshii OT3]
          Length = 480

 Score = 41.8 bits (96), Expect = 0.071,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 28/63 (44%), Gaps = 3/63 (4%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           I+ +    +LFSGG DS+     A    +    +S   G  +  ++E    V +++   +
Sbjct: 234 IRSSKKIGILFSGGLDSTLIAFIASRYSNVTLYVS---GTEDSKDVEWARKVSQELGLKL 290

Query: 65  PKW 67
            ++
Sbjct: 291 KEY 293


>gi|320196935|gb|EFW71556.1| tRNA(Ile)-lysidine synthetase [Escherichia coli WV_060327]
          Length = 437

 Score = 41.8 bits (96), Expect = 0.072,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 26/76 (34%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
          +N  +  +   L+ FSGG DS+  L   +        ++      +           K  
Sbjct: 5  LNTQLLSSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHGLSANADAWVKHC 64

Query: 61 VELMPKWKDSLGEDHI 76
            +  +W+  L  + +
Sbjct: 65 ENICQQWQVPLVVERV 80


>gi|313837818|gb|EFS75532.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Propionibacterium acnes HL037PA2]
 gi|314927301|gb|EFS91132.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Propionibacterium acnes HL044PA1]
          Length = 360

 Score = 41.8 bits (96), Expect = 0.072,   Method: Composition-based stats.
 Identities = 10/84 (11%), Positives = 22/84 (26%), Gaps = 12/84 (14%)

Query: 15 FSGGQDSSTCLSWALDRFDRVETLS---------FDYGQR---NKVELECRLCVRKKIVE 62
           SGG DS+   +  ++    V  +             G R   +  +         ++  
Sbjct: 1  MSGGIDSAVAAARLVEAGHDVTGVHLALSRNPRSHREGSRGCCSLEDSFDARRAADRLGI 60

Query: 63 LMPKWKDSLGEDHILPLAILGDIS 86
              W  S      +    + +  
Sbjct: 61 PFYVWDFSDRFAAEVIDPFIAEYQ 84


>gi|238021297|ref|ZP_04601723.1| hypothetical protein GCWU000324_01196 [Kingella oralis ATCC 51147]
 gi|237868277|gb|EEP69283.1| hypothetical protein GCWU000324_01196 [Kingella oralis ATCC 51147]
          Length = 362

 Score = 41.8 bits (96), Expect = 0.072,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 56/185 (30%), Gaps = 10/185 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           ++ + ++  SGG DSS   +    +   V  +     + +  +  C   +++  ++ M  
Sbjct: 2   QSQNIIVGLSGGVDSSVTAALLHQQGHNVRGIFMQNWEDDNNDQYCS--IKEDSLDAMAV 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 +  I+            +      + +    PN  V     I        A   
Sbjct: 60  ADIIGIDIDIVN---FAAQYKDKVFAYFLQEYEAGRTPNPDVLCNAEIKFKCFLDHAIAQ 116

Query: 127 GITNIV--IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH---TPLMWLKKYETW 181
           G   I       +   +G          + + +  L       +     PL  ++K E  
Sbjct: 117 GAEAIATGHYARKEVRNGVHYLLKGADGSKDQSYFLYRLQPFQLERALFPLGGMQKTEVR 176

Query: 182 KLAQD 186
           +LA D
Sbjct: 177 RLASD 181


>gi|237740329|ref|ZP_04570810.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium sp. 2_1_31]
 gi|229422346|gb|EEO37393.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium sp. 2_1_31]
          Length = 258

 Score = 41.8 bits (96), Expect = 0.072,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 19/60 (31%), Gaps = 2/60 (3%)

Query: 10 SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           A+L  SGG DS+       D    + V  +   Y   N   L     V + +       
Sbjct: 30 KAILGLSGGIDSALAAYLLRDALGKENVLAIMMPYKSSNPDSLNHAKLVVEDLGINSKVI 89


>gi|149908785|ref|ZP_01897445.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Moritella sp. PE36]
 gi|149808059|gb|EDM68000.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Moritella sp. PE36]
          Length = 526

 Score = 41.8 bits (96), Expect = 0.072,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 53/181 (29%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS           D++  +  D G     E +              +  D
Sbjct: 231 VILGLSGGVDSSVVAMLLQRAIGDKLTCVFVDNGLLRLNEGQ--------------QVMD 276

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+   L +  +                +        V            T A  L   
Sbjct: 277 MFGDRFGLKIVHVKAEDRFLDQMAGESDPEAKRKIIGRVFVEIFDEESKKLTNAKWLAQG 336

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  +   + +   I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 337 TIYPDVIES--AATKNGKAHVIKSHHNVGGLPDDMEMGLIEPLRELFKDEVRKIGLELGL 394

Query: 190 Q 190
            
Sbjct: 395 P 395


>gi|77819909|gb|ABB04097.1| asparagine synthetase [Glycine max]
          Length = 579

 Score = 41.8 bits (96), Expect = 0.072,   Method: Composition-based stats.
 Identities = 20/178 (11%), Positives = 46/178 (25%), Gaps = 13/178 (7%)

Query: 13  LLFSGGQDSSTCLSW----------ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +L SGG DSS   +           A     ++   SF  G     +L+    V   I  
Sbjct: 230 VLLSGGLDSSLVAAVTARYLAGTNAAKQWGTKLH--SFCVGLEGAPDLKAAKEVADYIGT 287

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +  ++     +D I  +  +     +     +   I    +            +    + 
Sbjct: 288 VHHEF-HYTVQDGIDAIEDVIYHIETYDVTTIRASIPMFLMSRKIKSLGVKWVISGEGSD 346

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
               G         + ++      +   +   +            +   + +L K   
Sbjct: 347 EIFGGYLYFHKAPNKEEFHQETCRKIKALHKYDCLRANKSTFAWGLEARVPFLDKDFI 404


>gi|13627050|sp|O85192|GUAA_LACRH RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|3483135|gb|AAC33274.1| GMP synthetase [Lactobacillus rhamnosus]
          Length = 517

 Score = 41.8 bits (96), Expect = 0.072,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 56/186 (30%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS            ++ ++  D+G   K E      V   +       
Sbjct: 223 KRVLLGLSGGVDSSVVGVLLHKAIGTQLTSIFVDHGLLRKGE---AEQVMDSLKGKFGLN 279

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       L  L  ++     + +               GR+ I +      A   G
Sbjct: 280 IIKVNAKDRF-LNDLRGVTDPEKKRKI--------------IGRDFIEVFNEEA-AKLNG 323

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G   TD          TI++      L  +    +  PL  L K E  +L + +
Sbjct: 324 IEFLAQGTLYTDVVESGTDTAQTIKSHHNVGGLPEDLKFKLIEPLNKLFKDEVRELGEKL 383

Query: 188 GGQDLV 193
           G    +
Sbjct: 384 GMPHSL 389


>gi|288818711|ref|YP_003433059.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Hydrogenobacter thermophilus TK-6]
 gi|288788111|dbj|BAI69858.1| tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase
           [Hydrogenobacter thermophilus TK-6]
 gi|308752298|gb|ADO45781.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Hydrogenobacter thermophilus TK-6]
          Length = 354

 Score = 41.8 bits (96), Expect = 0.072,   Method: Composition-based stats.
 Identities = 20/184 (10%), Positives = 45/184 (24%), Gaps = 6/184 (3%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR---KKIVELMPK 66
              +  SGG DSS            V  ++  +    +      L V    + + +    
Sbjct: 2   RVAVGMSGGVDSSVSALLLKMAGHEVIGVTLRFHTIPESCSTDDLRVCCSPEDVKDAAKV 61

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +             +              + +  N            FL        ++
Sbjct: 62  SEKLGIPHITFDWERIFKERVIDYFVQEYAEGKTPNPCAICNRDVKTGFLARYLREVAQV 121

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVT---VHTPLMWLKKYETWKL 183
                       +Y G         ++ + +  L +        +  PL  L K +  ++
Sbjct: 122 DRLATGHYARLVEYKGKRLIARAKDKSKDQSYFLALVRKKDLELLEFPLGDLTKEQVRRI 181

Query: 184 AQDI 187
           A + 
Sbjct: 182 AVEY 185


>gi|260584346|ref|ZP_05852093.1| GMP synthase [Granulicatella elegans ATCC 700633]
 gi|260157864|gb|EEW92933.1| GMP synthase [Granulicatella elegans ATCC 700633]
          Length = 517

 Score = 41.8 bits (96), Expect = 0.072,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 56/187 (29%), Gaps = 20/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS           D++  +  D+G                   L+ K
Sbjct: 222 NKKVLLGLSGGVDSSVVGVLLQKAIGDQLTCIFVDHG-------------------LLRK 262

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +     + +     L  I  ++  + ++     ++         N    VF    A   
Sbjct: 263 DEGDQVMESLSGKFGLNIIRVNAQERFLSKLKGVSDPEQKRKIIGNEFVYVFDDEAAKLT 322

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +  +  G   TD          TI++      L  +    +  PL  L K E   L   
Sbjct: 323 DVDFLAQGTLYTDIIESGTKTAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRALGTA 382

Query: 187 IGGQDLV 193
           +G  D +
Sbjct: 383 LGMPDSI 389


>gi|300772745|ref|ZP_07082615.1| asparagine synthase (glutamine-hydrolyzing) [Sphingobacterium
           spiritivorum ATCC 33861]
 gi|300761048|gb|EFK57874.1| asparagine synthase (glutamine-hydrolyzing) [Sphingobacterium
           spiritivorum ATCC 33861]
          Length = 563

 Score = 41.8 bits (96), Expect = 0.072,   Method: Composition-based stats.
 Identities = 22/180 (12%), Positives = 46/180 (25%), Gaps = 13/180 (7%)

Query: 13  LLFSGGQDSSTCLSWALD-------RFDRVET----LS-FDYGQRNKVELECRLCVRKKI 60
           +L SGG DSS   +             D+ E     L  F  G +   +L         I
Sbjct: 232 VLLSGGLDSSVIAAITKKFASKRIESGDQEEAWYPQLHSFAVGLKGAPDLIAAQRAADHI 291

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  +   ++ E       ++  +    +T  +        L          + L    
Sbjct: 292 GTIHHEINFTIQEGLDAIRDVIYHLETYDVTT-IRASTPMYLLARVIKSMGIKMVLSGEG 350

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           +     G           ++      +   +   +        +   V   + +L K   
Sbjct: 351 SDELFGGYLYFHKAPNAQEFHEETVRKLKKLYLYDCLRANKSLAAWGVEGRVPFLDKEFI 410


>gi|227538119|ref|ZP_03968168.1| asparagine synthase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227242024|gb|EEI92039.1| asparagine synthase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 563

 Score = 41.8 bits (96), Expect = 0.072,   Method: Composition-based stats.
 Identities = 22/180 (12%), Positives = 46/180 (25%), Gaps = 13/180 (7%)

Query: 13  LLFSGGQDSSTCLSWALD-------RFDRVET----LS-FDYGQRNKVELECRLCVRKKI 60
           +L SGG DSS   +             D+ E     L  F  G +   +L         I
Sbjct: 232 VLLSGGLDSSVIAAITKKFASKRIESGDQEEAWYPQLHSFAVGLKGAPDLIAAQRAADHI 291

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  +   ++ E       ++  +    +T  +        L          + L    
Sbjct: 292 GTIHHEINFTIQEGLDAIRDVIYHLETYDVTT-IRASTPMYLLARVIKSMGIKMVLSGEG 350

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
           +     G           ++      +   +   +        +   V   + +L K   
Sbjct: 351 SDELFGGYLYFHKAPNAQEFHEETVRKLKKLYLYDCLRANKSLAAWGVEGRVPFLDKEFI 410


>gi|254479828|ref|ZP_05093076.1| GMP synthase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214039390|gb|EEB80049.1| GMP synthase, C-terminal domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 525

 Score = 41.8 bits (96), Expect = 0.072,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 54/185 (29%), Gaps = 19/185 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMP 65
           +   LL  SGG DSS   +       D++  +  D G  R              +   + 
Sbjct: 227 SDKVLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRLNEGDHVMDMFASNMGVTVI 286

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +          L L  L   +     + +      +         +N+ +L         
Sbjct: 287 RADAES-----LFLGKLQGEADPEKKRKIIGNTFIDIFDEQATKLQNVNWLAQGTIY--- 338

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                        + +G    +   I++      L  + ++ +  PL  L K E  K+  
Sbjct: 339 ---------PDVIESAGAKTGKAHVIKSHHNVGGLPDDMNLELVEPLRELFKDEVRKIGL 389

Query: 186 DIGGQ 190
           ++G  
Sbjct: 390 ELGLP 394


>gi|154496175|ref|ZP_02034871.1| hypothetical protein BACCAP_00459 [Bacteroides capillosus ATCC
          29799]
 gi|150274730|gb|EDN01794.1| hypothetical protein BACCAP_00459 [Bacteroides capillosus ATCC
          29799]
          Length = 342

 Score = 41.8 bits (96), Expect = 0.072,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 18/51 (35%), Gaps = 2/51 (3%)

Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           SGG DS+   +  L R   V  L  D G     + +    V  ++     
Sbjct: 4  LSGGVDSAV-AAQLLSRDYEVHGLYLDIGLGGTGQADAA-AVAHRLDIPFH 52


>gi|332364175|gb|EGJ41952.1| tRNA(Ile)-lysidine synthetase [Streptococcus sanguinis SK49]
          Length = 425

 Score = 41.8 bits (96), Expect = 0.073,   Method: Composition-based stats.
 Identities = 24/206 (11%), Positives = 57/206 (27%), Gaps = 13/206 (6%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRV---ETL-SFDYGQRNKV--ELECRLCVRKKIV 61
               L+  SGG DS T L   +D    +     +   ++ QR +   E +  + + +++ 
Sbjct: 19  HRKVLVAVSGGLDSMTLLQLLIDYQKELAIELAIAHVNHKQRPESDQEEKALVKIAEQLG 78

Query: 62  E------LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
                      + ++                        A    D          R    
Sbjct: 79  VKIFTSSFSGNFSENAARQFRYDFFGNVMQEEHYTALVTAHHADDQAETVFMRLLRGARL 138

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
              +   A +      +I    T +            +     +        ++ P +  
Sbjct: 139 RHLSGMKAVQYFACGELIRPLLTFHKSDFPDIQHFEDSSNFQNDYLRNRIRNLYLPDLEK 198

Query: 176 KKYETWKLAQDIGGQDLVNLILEESH 201
           +  + +K +    G+++ +L    SH
Sbjct: 199 ENPQ-FKDSLRYLGKEIEDLQTALSH 223


>gi|229528754|ref|ZP_04418144.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae 12129(1)]
 gi|229332528|gb|EEN98014.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae 12129(1)]
          Length = 440

 Score = 41.8 bits (96), Expect = 0.073,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 17/52 (32%), Gaps = 4/52 (7%)

Query: 10 SALLLFSGGQDSSTCLSWALDR----FDRVETLSFDYGQRNKVELECRLCVR 57
            LL  SGG DS   L+            V  +   +G     +   + C R
Sbjct: 19 KILLALSGGVDSQVLLALLARGRDEFGWDVAAVHVHHGLSPNADQWAQHCQR 70


>gi|218710301|ref|YP_002417922.1| tRNA(Ile)-lysidine synthase [Vibrio splendidus LGP32]
 gi|254764823|sp|B7VIQ1|TILS_VIBSL RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
          Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
          Full=tRNA(Ile)-lysidine synthetase
 gi|218323320|emb|CAV19497.1| tRNA(Ile)-lysidine synthase [Vibrio splendidus LGP32]
          Length = 456

 Score = 41.8 bits (96), Expect = 0.073,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 17/54 (31%), Gaps = 4/54 (7%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALD----RFDRVETLSFDYGQRNKVELECRLCV 56
          K    ++ FSGG DS   L  A             +   +G     +L    C 
Sbjct: 18 KPSRLIVAFSGGVDSRVLLELAAQYAQTHGIECCAVHVHHGLSKNADLWAEQCQ 71


>gi|193212641|ref|YP_001998594.1| argininosuccinate synthase [Chlorobaculum parvum NCIB 8327]
 gi|229889859|sp|B3QN91|ASSY_CHLP8 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|193086118|gb|ACF11394.1| Argininosuccinate synthase [Chlorobaculum parvum NCIB 8327]
          Length = 401

 Score = 41.8 bits (96), Expect = 0.073,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 3/43 (6%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQR 45
          + K   A+  +SGG D+S  + W  D      +  ++ + GQ+
Sbjct: 1  MSKEKIAVA-YSGGLDTSVMIKWLKDKYEGAEIVAVTGNLGQK 42


>gi|169831320|ref|YP_001717302.1| PP-loop domain-containing protein [Candidatus Desulforudis
          audaxviator MP104C]
 gi|169638164|gb|ACA59670.1| PP-loop domain protein [Candidatus Desulforudis audaxviator
          MP104C]
          Length = 297

 Score = 41.8 bits (96), Expect = 0.073,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 20/57 (35%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
          +++     L+  SGG+DS T           V  +  D G  +         + ++ 
Sbjct: 43 MLQPGERVLVAVSGGKDSLTVADVLDRLGYAVRGVHVDLGIDDNGFSSESTALCREF 99


>gi|118474706|ref|YP_892420.1| GMP synthase [Campylobacter fetus subsp. fetus 82-40]
 gi|226738410|sp|A0RQD7|GUAA_CAMFF RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|118413932|gb|ABK82352.1| GMP synthase, glutamine-hydrolyzing [Campylobacter fetus subsp.
           fetus 82-40]
          Length = 510

 Score = 41.8 bits (96), Expect = 0.073,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 48/183 (26%), Gaps = 21/183 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYG-QRNKVELECRLCVRKKIVELMP 65
               L   SGG DSS   +       D +  +  D G  R     +     + K+   + 
Sbjct: 214 NDKVLCAVSGGVDSSVVAALLAHAIPDNLIVVFVDNGLLRTNEAKQVEEMFKLKLGVNLI 273

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
               S      L L+ L  +      + +  +                I +       + 
Sbjct: 274 SIDAS-----ELFLSRLKGVRDPEKKRKIIGE--------------TFIEVFDKEAKKHS 314

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                    +              TI++      L       +  PL  + K E  +L  
Sbjct: 315 NVKYLAQGTLYTDVIESSVVGSSKTIKSHHNVGGLPEWMEFELIEPLREIFKDEVRRLGL 374

Query: 186 DIG 188
           ++G
Sbjct: 375 ELG 377


>gi|62719475|gb|AAX93338.1| GMP synthetase [Lactobacillus sanfranciscensis]
          Length = 236

 Score = 41.8 bits (96), Expect = 0.073,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 4/70 (5%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++ ++  D+G   K E      V K + +     
Sbjct: 158 KKVLLGLSGGVDSSVVAVLLHRAIGDQLISVFVDHGLLRKNE---AQQVLKALGDDFGLN 214

Query: 68  KDSLGEDHIL 77
            D +    + 
Sbjct: 215 IDFVDASELF 224


>gi|323165890|gb|EFZ51672.1| tRNA(Ile)-lysidine synthetase [Shigella sonnei 53G]
          Length = 193

 Score = 41.8 bits (96), Expect = 0.073,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 5/60 (8%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYGQRNKVELECRLC 55
          +N  +  +   L+ FSGG DS+  L   +          +  +   +G     +   R C
Sbjct: 5  LNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHGLSANADAWVRHC 64


>gi|295105116|emb|CBL02660.1| Argininosuccinate synthase [Faecalibacterium prausnitzii SL3/3]
          Length = 230

 Score = 41.8 bits (96), Expect = 0.073,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 33/86 (38%), Gaps = 3/86 (3%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + +    +L +S G D+S  + W  + +    V  +  + GQ+ ++E            +
Sbjct: 1  MSEVKKVVLAYSDGLDTSIIIPWLKEHYNNCEVIAVCGNVGQKGELEGLEERAKASGASK 60

Query: 63 LM-PKWKDSLGEDHILPLAILGDISH 87
          L      D   ED+++P    G    
Sbjct: 61 LYIEDLTDEFVEDYVIPTMQAGADYE 86


>gi|307729357|ref|YP_003906581.1| GMP synthase large subunit [Burkholderia sp. CCGE1003]
 gi|307583892|gb|ADN57290.1| GMP synthase, large subunit [Burkholderia sp. CCGE1003]
          Length = 527

 Score = 41.8 bits (96), Expect = 0.073,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 56/181 (30%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D+G    + L     V     + +     
Sbjct: 225 VILGLSGGVDSSVAAALLHRAIGDQLTCVFVDHG---LLRLNEAEQVMATFADHLGVKVI 281

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +    +    + G     +  K +  +  +                    T A  L   
Sbjct: 282 HVDASDVFLRKLEGVTDPEAKRKIIGAEFVEVFQTE-----------AGKLTDAKWLAQG 330

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+   G       TI++      L    ++ +  PL  L K E  +L   +G 
Sbjct: 331 TIYPDVIESAGKGKK--ATQTIKSHHNVGGLPETLNLKLLEPLRELFKDEVRELGVKLGL 388

Query: 190 Q 190
            
Sbjct: 389 P 389


>gi|323526462|ref|YP_004228615.1| GMP synthase large subunit [Burkholderia sp. CCGE1001]
 gi|323383464|gb|ADX55555.1| GMP synthase, large subunit [Burkholderia sp. CCGE1001]
          Length = 527

 Score = 41.8 bits (96), Expect = 0.073,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 56/181 (30%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D+G    + L     V     + +     
Sbjct: 225 VILGLSGGVDSSVAAALLHRAIGDQLTCVFVDHG---LLRLNEAEQVMATFADHLGVKVI 281

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +    +    + G     +  K +  +  +                    T A  L   
Sbjct: 282 HVDASDVFLRKLEGVTDPEAKRKIIGAEFVEVFQTE-----------AGKLTDAKWLAQG 330

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+   G       TI++      L    ++ +  PL  L K E  +L   +G 
Sbjct: 331 TIYPDVIESAGKGKK--ATQTIKSHHNVGGLPETLNLKLLEPLRELFKDEVRELGVKLGL 388

Query: 190 Q 190
            
Sbjct: 389 P 389


>gi|170692169|ref|ZP_02883332.1| GMP synthase, large subunit [Burkholderia graminis C4D1M]
 gi|170142599|gb|EDT10764.1| GMP synthase, large subunit [Burkholderia graminis C4D1M]
          Length = 527

 Score = 41.8 bits (96), Expect = 0.073,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 56/181 (30%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D+G    + L     V     + +     
Sbjct: 225 VILGLSGGVDSSVAAALLHRAIGDQLTCVFVDHG---LLRLNEAEQVMATFADHLGVKVI 281

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +    +    + G     +  K +  +  +                    T A  L   
Sbjct: 282 HVDASDVFLRKLEGVTDPEAKRKIIGAEFVEVFQTE-----------AGKLTDAKWLAQG 330

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+   G       TI++      L    ++ +  PL  L K E  +L   +G 
Sbjct: 331 TIYPDVIESAGKGKK--ATQTIKSHHNVGGLPETLNLKLLEPLRELFKDEVRELGVKLGL 388

Query: 190 Q 190
            
Sbjct: 389 P 389


>gi|160943420|ref|ZP_02090654.1| hypothetical protein FAEPRAM212_00911 [Faecalibacterium
          prausnitzii M21/2]
 gi|158445280|gb|EDP22283.1| hypothetical protein FAEPRAM212_00911 [Faecalibacterium
          prausnitzii M21/2]
          Length = 230

 Score = 41.8 bits (96), Expect = 0.073,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 33/86 (38%), Gaps = 3/86 (3%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + +    +L +S G D+S  + W  + +    V  +  + GQ+ ++E            +
Sbjct: 1  MSEVKKVVLAYSDGLDTSIIIPWLKEHYNNCEVIAVCGNVGQKGELEGLEERAKASGASK 60

Query: 63 LM-PKWKDSLGEDHILPLAILGDISH 87
          L      D   ED+++P    G    
Sbjct: 61 LYIEDLTDEFVEDYVIPTMQAGADYE 86


>gi|169772959|ref|XP_001820948.1| argininosuccinate synthase [Aspergillus oryzae RIB40]
 gi|238490888|ref|XP_002376681.1| argininosuccinate synthase [Aspergillus flavus NRRL3357]
 gi|83768809|dbj|BAE58946.1| unnamed protein product [Aspergillus oryzae]
 gi|220697094|gb|EED53435.1| argininosuccinate synthase [Aspergillus flavus NRRL3357]
          Length = 417

 Score = 41.8 bits (96), Expect = 0.073,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 35/127 (27%), Gaps = 5/127 (3%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE- 62
           +  + P   L +SGG D+S  L W ++    V     + GQ  + +         KI   
Sbjct: 1   MATEKPRVCLAYSGGLDTSCILRWLIEEGYEVVCFLGNVGQ--EEDWAAVEEKALKIGAK 58

Query: 63  --LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             ++   +    E+   P      I         ++           V  R     V   
Sbjct: 59  KMVIEDLRREFVEELCFPAIQCNAIYEGRYLLGTSLARPVIARAQMRVAQREGCQFVSHG 118

Query: 121 TLAYRLG 127
                  
Sbjct: 119 ATGKGND 125


>gi|331702163|ref|YP_004399122.1| GMP synthase [Lactobacillus buchneri NRRL B-30929]
 gi|329129506|gb|AEB74059.1| GMP synthase (glutamine-hydrolyzing) [Lactobacillus buchneri NRRL
           B-30929]
          Length = 517

 Score = 41.8 bits (96), Expect = 0.074,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 57/186 (30%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS            ++ ++  D+G                   L+ K 
Sbjct: 223 KKVLLGLSGGVDSSVVGVLLHKAIGKQLTSIFVDHG-------------------LLRKN 263

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +     D ++    L  I   +  + ++      +         N    VF    +   G
Sbjct: 264 EADQVMDSLVGKFGLNIIKVDAQDRFLSKLKGVTDPEKKRKIIGNEFIQVFNDEASKLHG 323

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G   TD          TI++      L  +    +  PL  L K E   + + +
Sbjct: 324 IDFLAQGTLYTDVVESGTDTAQTIKSHHNVGGLPEDMKFKLIEPLNTLFKDEARAIGEKL 383

Query: 188 GGQDLV 193
           G  + +
Sbjct: 384 GMPETL 389


>gi|311742385|ref|ZP_07716194.1| argininosuccinate synthase [Aeromicrobium marinum DSM 15272]
 gi|311314013|gb|EFQ83921.1| argininosuccinate synthase [Aeromicrobium marinum DSM 15272]
          Length = 482

 Score = 41.8 bits (96), Expect = 0.074,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 3/72 (4%)

Query: 1  MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M+ ++   P      + FSGG D+S  ++W  DR     T + D GQ ++ ++       
Sbjct: 1  MSKVMTSLPVGERVGIAFSGGLDTSVAVAWMRDRGAVPCTYTADIGQYDEPDIAGVPGRA 60

Query: 58 KKIVELMPKWKD 69
           +    + +  D
Sbjct: 61 MQYGAELARAID 72


>gi|300215125|gb|ADJ79541.1| GMP synthase [glutamine-hydrolyzing] (Glutamine amidotransferase)
           (GMP synthetase) [Lactobacillus salivarius CECT 5713]
          Length = 518

 Score = 41.8 bits (96), Expect = 0.074,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 53/186 (28%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           +++ ++  D+G   K E                + 
Sbjct: 224 KKVLLGLSGGVDSSVVGVLLHKAIGNQLTSIFVDHGLLRKGE--------------AEQV 269

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            DSLG    L +  +                +           R           A   G
Sbjct: 270 MDSLGGKFGLNIIKVDAKERFLNKLAGVSDPEKKRKIIGNEFIRVFDDES-----AKLEG 324

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G   TD          TI++      L  +    +  PL  L K E  +L + +
Sbjct: 325 IEFLAQGTLYTDIIESGTDTAQTIKSHHNVGGLPEDVQFKLIEPLNTLFKDEVRELGEKL 384

Query: 188 GGQDLV 193
           G    +
Sbjct: 385 GMPHEL 390


>gi|218961203|ref|YP_001740978.1| GMP synthase [glutamine-hydrolyzing] (Glutamine amidotransferase)
           (GMP synthetase) [Candidatus Cloacamonas
           acidaminovorans]
 gi|167729860|emb|CAO80772.1| GMP synthase [glutamine-hydrolyzing] (Glutamine amidotransferase)
           (GMP synthetase) [Candidatus Cloacamonas
           acidaminovorans]
          Length = 511

 Score = 41.8 bits (96), Expect = 0.074,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 53/188 (28%), Gaps = 18/188 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS           +++  +  D G     E      V++        
Sbjct: 214 NQKVLLGLSGGVDSSVTAVLLYKTIGNQLLPIFVDTGLMRYKE---AERVKQTFSAY--- 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                  D  +          S L      + +   + NTF+     I   +        
Sbjct: 268 ------PDLNIRYVDASKTFISKLKGITDPETKRKIIGNTFIEVFEKIAGEYEEVHFLAQ 321

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G         +   S         I++      L  + ++ +  PL  L K E  ++   
Sbjct: 322 G-----TLYPDVIESATFTGMTAKIKSHHNVGGLPEKMNLALIEPLRELFKDEVREVGTL 376

Query: 187 IGGQDLVN 194
           +G  + + 
Sbjct: 377 LGLPESII 384


>gi|90962508|ref|YP_536424.1| GMP synthase [Lactobacillus salivarius UCC118]
 gi|122448520|sp|Q1WRY8|GUAA_LACS1 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|90821702|gb|ABE00341.1| GMP synthase [Lactobacillus salivarius UCC118]
          Length = 518

 Score = 41.8 bits (96), Expect = 0.074,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 53/186 (28%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           +++ ++  D+G   K E                + 
Sbjct: 224 KKVLLGLSGGVDSSVVGVLLHKAIGNQLTSIFVDHGLLRKGE--------------AEQV 269

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            DSLG    L +  +                +           R           A   G
Sbjct: 270 MDSLGGKFGLNIIKVDAKERFLNKLAGVSDPEKKRKIIGNEFIRVFDDES-----AKLEG 324

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G   TD          TI++      L  +    +  PL  L K E  +L + +
Sbjct: 325 IEFLAQGTLYTDIIESGTDTAQTIKSHHNVGGLPEDVQFKLIEPLNTLFKDEVRELGEKL 384

Query: 188 GGQDLV 193
           G    +
Sbjct: 385 GMPHEL 390


>gi|325208143|gb|ADZ03595.1| sulfate adenylyltransferase, small subunit [Neisseria meningitidis
           NZ-05/33]
          Length = 307

 Score = 41.8 bits (96), Expect = 0.075,   Method: Composition-based stats.
 Identities = 18/170 (10%), Positives = 42/170 (24%), Gaps = 10/170 (5%)

Query: 13  LLFSGGQDSSTCLSWALDR---FDRVE-----TLSFDYGQRNKVELECRLCVRKKIVELM 64
           LLFSGG+DS   L+ A        R        +  D G      +  R     K+   +
Sbjct: 34  LLFSGGKDSVVLLALACKAFRLGSRPVKLPFPLVHIDTGHNYPEVIAFRDAQAAKLNARL 93

Query: 65  --PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
              + +DS+ +  ++        + +     +     +          R+         +
Sbjct: 94  IVGRVEDSIAKGTVVLRKETDSRNAAQAVTLLETIEANGFDALMGGARRDEEKARAKERI 153

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
                         +                      +   + + +   +
Sbjct: 154 FSFRDEFGQWNPKAQRPELWSLYNTRLHKGENMRVFPISNWTELDIWQYI 203


>gi|308389295|gb|ADO31615.1| putative sulphate adenylate transferase subunit 2 [Neisseria
           meningitidis alpha710]
 gi|325130260|gb|EGC53029.1| sulfate adenylyltransferase, small subunit [Neisseria meningitidis
           OX99.30304]
 gi|325136311|gb|EGC58919.1| sulfate adenylyltransferase, small subunit [Neisseria meningitidis
           M0579]
 gi|325202103|gb|ADY97557.1| sulfate adenylyltransferase, small subunit [Neisseria meningitidis
           M01-240149]
          Length = 307

 Score = 41.8 bits (96), Expect = 0.075,   Method: Composition-based stats.
 Identities = 18/170 (10%), Positives = 42/170 (24%), Gaps = 10/170 (5%)

Query: 13  LLFSGGQDSSTCLSWALDR---FDRVE-----TLSFDYGQRNKVELECRLCVRKKIVELM 64
           LLFSGG+DS   L+ A        R        +  D G      +  R     K+   +
Sbjct: 34  LLFSGGKDSVVLLALACKAFRLGSRPVKLPFPLVHIDTGHNYPEVIAFRDAQAAKLNARL 93

Query: 65  --PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
              + +DS+ +  ++        + +     +     +          R+         +
Sbjct: 94  IVGRVEDSIAKGTVVLRKETDSRNAAQAVTLLETIEANGFDALMGGARRDEEKARAKERI 153

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
                         +                      +   + + +   +
Sbjct: 154 FSFRDEFGQWNPKAQRPELWSLYNTRLHKGENMRVFPISNWTELDIWQYI 203


>gi|282862484|ref|ZP_06271546.1| argininosuccinate synthase [Streptomyces sp. ACTE]
 gi|282562823|gb|EFB68363.1| argininosuccinate synthase [Streptomyces sp. ACTE]
          Length = 486

 Score = 41.8 bits (96), Expect = 0.075,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 26/57 (45%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  ++W  D+     T + D GQ ++ ++       +     + +  D
Sbjct: 21 IAFSGGLDTSVAVAWMRDKGAVPCTYTADIGQYDEPDIASVPGRAQAYGAELARLVD 77


>gi|228473260|ref|ZP_04058014.1| sulfate adenylyltransferase subunit 2 [Capnocytophaga gingivalis
           ATCC 33624]
 gi|228275162|gb|EEK13960.1| sulfate adenylyltransferase subunit 2 [Capnocytophaga gingivalis
           ATCC 33624]
          Length = 297

 Score = 41.8 bits (96), Expect = 0.075,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 49/181 (27%), Gaps = 12/181 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRV----ETLSFDYGQRNKVELECRLCV 56
           M ++  +     LLFSGG+DS T +  A+  F  +      +  D G  +          
Sbjct: 15  MREVAAQFERPALLFSGGKDSITLVHLAIKAFAPMKIPFPLVHIDTG--HNFPEAIAYR- 71

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
                 L  +    L    +        ++           +Q + L +T         +
Sbjct: 72  ----DALAKRIGAELIVRQVEDTIKAKGLTEPKGKFASRNWLQTHTLLDTIEEFHFDACI 127

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPD-CRHDTIRAIETAINLGMESHVTVHTPLMWL 175
             A     +         V +      P   R +        I+ G    V   +    L
Sbjct: 128 GGARRDEEKARAKERFFSVRDEFGQWDPKLQRPELWDIYNGRIHKGENVRVFPISNWTEL 187

Query: 176 K 176
            
Sbjct: 188 D 188


>gi|254448980|ref|ZP_05062434.1| glutamine-dependent NAD+ synthetase signal peptide protein [gamma
           proteobacterium HTCC5015]
 gi|198261374|gb|EDY85665.1| glutamine-dependent NAD+ synthetase signal peptide protein [gamma
           proteobacterium HTCC5015]
          Length = 543

 Score = 41.8 bits (96), Expect = 0.075,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 57/194 (29%), Gaps = 4/194 (2%)

Query: 10  SALLL-FSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
             ++L  SGG DS+  L+ A+D    DRVE +       +++ L+    + +        
Sbjct: 287 KGVVLGLSGGIDSALVLALAVDALGADRVEAVMMPSRYTSQMSLDDAAQIAENFGVAYHT 346

Query: 67  WKDSLGEDHILP-LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  D  L  L  L   +    T+          +       + ++ L       Y 
Sbjct: 347 VSIEPSFDAALNALQPLFGGAAVDTTEENMQARIRGLMLMALSNKKGLLVLPTGNKSEYA 406

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +G + +   +           +             G      +       +     K   
Sbjct: 407 VGYSTLYGDMVGGFAPLKDVSKSRVFALSRWRNRNGEMIPQRIIDRPPSAELAPDQKDED 466

Query: 186 DIGGQDLVNLILEE 199
            +   ++++ ILE 
Sbjct: 467 SLPAYEILDQILEL 480


>gi|189461602|ref|ZP_03010387.1| hypothetical protein BACCOP_02261 [Bacteroides coprocola DSM 17136]
 gi|189431712|gb|EDV00697.1| hypothetical protein BACCOP_02261 [Bacteroides coprocola DSM 17136]
          Length = 426

 Score = 41.8 bits (96), Expect = 0.075,   Method: Composition-based stats.
 Identities = 18/129 (13%), Positives = 34/129 (26%), Gaps = 10/129 (7%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
           +  ++   L+  SGG DS   L   L           ++  R + E +      + +   
Sbjct: 15  LFHRSDKILVALSGGADSVALLRVLLLEGYNCVAAHCNFHLRGE-ESDRDEEFVQNLCR- 72

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
                   G D  L +       ++S  +              F   R  +     A   
Sbjct: 73  --------GLDVPLQVIHFDTNGYASRKRISIEMAARELRYEWFEQVRLQVGASVIAVAH 124

Query: 124 YRLGITNIV 132
           +R       
Sbjct: 125 HRDDSVETF 133


>gi|330959215|gb|EGH59475.1| tRNA(Ile)-lysidine synthetase [Pseudomonas syringae pv.
          maculicola str. ES4326]
          Length = 445

 Score = 41.8 bits (96), Expect = 0.075,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 22/64 (34%), Gaps = 7/64 (10%)

Query: 15 FSGGQDSSTCLSWALDRFDR-----VETLSFDYGQRNK--VELECRLCVRKKIVELMPKW 67
          FSGG DS+  L    D   R     +  +   +G +       E    V + +     + 
Sbjct: 32 FSGGLDSTVLLHLLADLSRRETLPALNAVHVHHGLQAAADAWPEHCRQVCQALGVAFERV 91

Query: 68 KDSL 71
          +  +
Sbjct: 92 RVQV 95


>gi|328676062|gb|AEB28737.1| GMP synthase (glutamine-hydrolyzing) [Francisella cf. novicida
           3523]
          Length = 522

 Score = 41.8 bits (96), Expect = 0.075,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 53/184 (28%), Gaps = 17/184 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +       D++  +  D G                ++ L   
Sbjct: 224 NDKVILGLSGGVDSSVVAAILHQAIGDQLTCIFVDTG----------------LLRLNEG 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            +        + + ++   + +     +                   IF   AA +    
Sbjct: 268 DQVMQVFAEHMDINVIRINAKNRFLDALRGICDPEQKRKIIGKLFVDIFDEEAAKIENAK 327

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +    I     + +G    +   I++      L  E  + +  PL  L K E  KL   
Sbjct: 328 WLAQGTIYSDVIESAGNNQSKAHVIKSHHNVGGLPKEMKLKLLEPLRELFKDEVRKLGLG 387

Query: 187 IGGQ 190
           +G  
Sbjct: 388 LGLP 391


>gi|322375115|ref|ZP_08049629.1| argininosuccinate synthase [Streptococcus sp. C300]
 gi|321280615|gb|EFX57654.1| argininosuccinate synthase [Streptococcus sp. C300]
          Length = 398

 Score = 41.8 bits (96), Expect = 0.075,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 55/216 (25%), Gaps = 34/216 (15%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               +L +SGG D+S  ++W       V  +  D G     +LE       K+       
Sbjct: 3   KEKVILAYSGGLDTSVAITWLKKD-YDVIAVCMDVG--EGKDLEFIHDKALKVGA----- 54

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT-LAYRL 126
                E +++ +    +   +                   V   +   +      +A++ 
Sbjct: 55  ----VESYVIDV---KEEFANDYVLVALQAHAYYEQKYPLVSALSRPLISKKLVEIAHQT 107

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G T I  G                     +   L     V          + E  + A++
Sbjct: 108 GATTIAHGCTGKGNDQVRFE--------VSIGALDPNLKVVAPVREWKWSREEEIQYAKE 159

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYG--CNS 220
            G     +L               +  WG    C  
Sbjct: 160 NGVPVPADLD--------NPYSVDQNLWGRANECGV 187


>gi|289643229|ref|ZP_06475355.1| argininosuccinate synthase [Frankia symbiont of Datisca
          glomerata]
 gi|289506934|gb|EFD27907.1| argininosuccinate synthase [Frankia symbiont of Datisca
          glomerata]
          Length = 400

 Score = 41.8 bits (96), Expect = 0.075,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 15/39 (38%), Gaps = 1/39 (2%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQ 44
               +L +SGG D S        +    V  L+ D GQ
Sbjct: 1  MTDRVVLAYSGGLDTSVAIGWIGAETGAEVVALAVDVGQ 39


>gi|239945197|ref|ZP_04697134.1| sulfate adenylyltransferase subunit 2 [Streptomyces roseosporus
           NRRL 15998]
 gi|239991659|ref|ZP_04712323.1| sulfate adenylyltransferase subunit 2 [Streptomyces roseosporus
           NRRL 11379]
 gi|291448663|ref|ZP_06588053.1| sulfate adenylyltransferase subunit 2 [Streptomyces roseosporus
           NRRL 15998]
 gi|291351610|gb|EFE78514.1| sulfate adenylyltransferase subunit 2 [Streptomyces roseosporus
           NRRL 15998]
          Length = 312

 Score = 41.8 bits (96), Expect = 0.075,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 4/61 (6%)

Query: 12  LLLFSGGQDSSTCLSWALDRF----DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++LFSGG+DS   L  AL  F         L  D G      L+ R    KK    +   
Sbjct: 43  VILFSGGKDSIVMLHLALKAFAPAPVPFTLLHVDTGHNFPEVLDYRDRTVKKHGLRLHVA 102

Query: 68  K 68
            
Sbjct: 103 S 103


>gi|224540084|ref|ZP_03680623.1| hypothetical protein BACCELL_04997 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518315|gb|EEF87420.1| hypothetical protein BACCELL_04997 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 564

 Score = 41.8 bits (96), Expect = 0.075,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 44/187 (23%), Gaps = 14/187 (7%)

Query: 13  LLFSGGQDSSTCLSWALDRFDR------------VETLSFDYGQRNKVELECRLCVRKKI 60
           +L SGG DSS   + A     +             +  SF  G R   +L     V + I
Sbjct: 240 VLLSGGLDSSVISAIAKKYARKRIETDNQSEAWWPQLHSFAVGLRGAPDLIKAREVAEYI 299

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  +      ++ +  L  +     +     V        L          + L    
Sbjct: 300 GTVHHEIN-YTIQEGLDALHDVIYFIETYDVTTVRASTPMYLLARVIKSMGIKMVLSGEG 358

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
                 G                   R  +   +   +              +     E 
Sbjct: 359 AD-EVFGGYLYFHKAPTPQAFHEETIRKLSKLHLYDCLRANKSLSAWGVEGRVPFLDKEF 417

Query: 181 WKLAQDI 187
             +A ++
Sbjct: 418 LDVAMNL 424


>gi|182435188|ref|YP_001822907.1| sulfate adenylyltransferase subunit 2 [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326775825|ref|ZP_08235090.1| sulfate adenylyltransferase, small subunit [Streptomyces cf.
           griseus XylebKG-1]
 gi|178463704|dbj|BAG18224.1| putative sulfate adenylyltransferase subunit 2 [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|326656158|gb|EGE41004.1| sulfate adenylyltransferase, small subunit [Streptomyces cf.
           griseus XylebKG-1]
          Length = 312

 Score = 41.8 bits (96), Expect = 0.075,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 4/61 (6%)

Query: 12  LLLFSGGQDSSTCLSWALDRF----DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++LFSGG+DS   L  AL  F         L  D G      L+ R    KK    +   
Sbjct: 43  VILFSGGKDSIVMLHLALKAFAPAPVPFTLLHVDTGHNFPEVLDYRDRTVKKHGLRLHVA 102

Query: 68  K 68
            
Sbjct: 103 S 103


>gi|50955699|ref|YP_062987.1| argininosuccinate synthase [Leifsonia xyli subsp. xyli str.
          CTCB07]
 gi|81692557|sp|Q6ACL1|ASSY_LEIXX RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|50952181|gb|AAT89882.1| argininosuccinate synthetase [Leifsonia xyli subsp. xyli str.
          CTCB07]
          Length = 478

 Score = 41.8 bits (96), Expect = 0.075,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 3/72 (4%)

Query: 1  MNDIIKKAP---SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
          M+ ++   P      + FSGG D+S  ++W  ++       + D GQ ++  +E      
Sbjct: 1  MSKVLSSLPVGERVGIAFSGGLDTSCAVAWMREKGAVPCAYTADIGQYDEPNIEEVPGRA 60

Query: 58 KKIVELMPKWKD 69
           +    + +  D
Sbjct: 61 TEYGAEIARLVD 72


>gi|56552163|ref|YP_163002.1| GMP synthase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|81354934|sp|Q5NN19|GUAA_ZYMMO RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|56543737|gb|AAV89891.1| GMP synthase, large subunit [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 526

 Score = 41.8 bits (96), Expect = 0.075,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 54/183 (29%), Gaps = 17/183 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS       +   D++  +  D+G   + E        +++V L     
Sbjct: 230 RVICGLSGGVDSSVTAVLVHEAIGDQLTCVFVDHGLMRQGE-------AEQVVSLFR--- 279

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E + + L  +                +                       A  L  
Sbjct: 280 ----EHYGIKLVHVNAEDRFLAGLKGVTDPETKRKFIGKTFIEIFEEEAKKIGGADFLAQ 335

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +   V E+    +      TI++      L    ++ +  PL  L K E   L +++G
Sbjct: 336 GTLYPDVIESV--SFLGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRDLGRELG 393

Query: 189 GQD 191
             D
Sbjct: 394 MPD 396


>gi|30353831|gb|AAH52127.1| Asparagine synthetase [Danio rerio]
          Length = 560

 Score = 41.8 bits (96), Expect = 0.075,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 18/60 (30%), Gaps = 4/60 (6%)

Query: 13  LLFSGGQDSSTCLSWALDRFDR---VETL-SFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            L SGG DSS   +  +           + +F  G  +  ++     V   I        
Sbjct: 254 CLLSGGLDSSLVAALLVKLAKEEKLPYPIQTFSIGAEDSPDVAAARKVADYIGSEHHVVN 313


>gi|110637346|ref|YP_677553.1| GMP synthase [Cytophaga hutchinsonii ATCC 33406]
 gi|123354724|sp|Q11WK3|GUAA_CYTH3 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|110280027|gb|ABG58213.1| GMP synthase (glutamine-hydrolyzing) [Cytophaga hutchinsonii ATCC
           33406]
          Length = 509

 Score = 41.8 bits (96), Expect = 0.075,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 52/187 (27%), Gaps = 19/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS             +  +  D G   K E E  L   K +      
Sbjct: 213 TDKVVLGLSGGVDSSVAAVLIHKAIGPNLTCIFVDNGLLRKNEYEEVLNSYKHMG----- 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                   +++ +        S    +     +                          L
Sbjct: 268 -------LNVIGVDAKKQFYKSLEGLSDPEAKRKAIGKEFIEVF---DQESHKIADVKWL 317

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   I   + E+     P      I++      L  +  + +  PL  L K E  ++ + 
Sbjct: 318 GQGTIYPDIIESVSVKGPSAT---IKSHHNVGGLPEKMKLKIVEPLNTLFKDEVRRVGKT 374

Query: 187 IGGQDLV 193
           +G  D++
Sbjct: 375 LGIDDII 381


>gi|293604199|ref|ZP_06686607.1| sulfate adenylyltransferase subunit 2 [Achromobacter piechaudii
           ATCC 43553]
 gi|292817424|gb|EFF76497.1| sulfate adenylyltransferase subunit 2 [Achromobacter piechaudii
           ATCC 43553]
          Length = 302

 Score = 41.8 bits (96), Expect = 0.076,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 58/191 (30%), Gaps = 16/191 (8%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF----DRVETLSFDYGQRNKVELECRLCV 56
           M ++  ++   +LLFSGG+DS   L  A   F         +  D G      +  R   
Sbjct: 21  MREVAAESEKPVLLFSGGKDSVVLLRLAEKAFRPGRFPFPLMHIDTGHNFDEVIAFRDQR 80

Query: 57  RKKIVE-LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
             ++ E L+ +  +   +   + L    D  +++    +   I++          R    
Sbjct: 81  AAELGETLIVRSVEDSIKRGSVVLRRETDSRNAAQAVTLLEAIEEFGFDACIGGARRD-- 138

Query: 116 LVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
                          I     E         R +      T ++ G    V    P+   
Sbjct: 139 ------EEKARAKERIFSFRDEFGQWDPKAQRPELWSLFNTRVHRGENMRV---FPISNW 189

Query: 176 KKYETWKLAQD 186
            + + W+  Q 
Sbjct: 190 TELDVWQYIQR 200


>gi|206579796|ref|YP_002237144.1| GMP synthase (glutamine-hydrolyzing) [Klebsiella pneumoniae 342]
 gi|288934103|ref|YP_003438162.1| GMP synthase, small subunit [Klebsiella variicola At-22]
 gi|290508301|ref|ZP_06547672.1| GMP synthase [Klebsiella sp. 1_1_55]
 gi|226739635|sp|B5XNM4|GUAA_KLEP3 RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|206568854|gb|ACI10630.1| GMP synthase (glutamine-hydrolyzing) [Klebsiella pneumoniae 342]
 gi|288888832|gb|ADC57150.1| GMP synthase, small subunit [Klebsiella variicola At-22]
 gi|289777695|gb|EFD85692.1| GMP synthase [Klebsiella sp. 1_1_55]
          Length = 525

 Score = 41.8 bits (96), Expect = 0.076,   Method: Composition-based stats.
 Identities = 24/183 (13%), Positives = 50/183 (27%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAQQVMDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +    L  L   +     + +  ++         +   ++ +L           
Sbjct: 285 IVHVEGEQRF-LDALKGENDPEAKRKIIGRVFVEVFDEEALKLDDVKWLAQGTIY----- 338

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                      + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 339 -------PDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLRELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|163867327|ref|YP_001608521.1| argininosuccinate synthase [Bartonella tribocorum CIP 105476]
 gi|189046381|sp|A9IL50|ASSY_BART1 RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|161016968|emb|CAK00526.1| Argininosuccinate synthase [Bartonella tribocorum CIP 105476]
          Length = 411

 Score = 41.8 bits (96), Expect = 0.076,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 46/150 (30%), Gaps = 7/150 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +L +SGG D+S  L W        V T + D GQ  ++EL       + +  +   + 
Sbjct: 9   KVVLAYSGGLDTSIILKWLQSTLDAEVVTFTADLGQGEELEL--ARRKAEMLG-VKEIYI 65

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           + L E+ +            + T      +   ++    +  R I         A   G 
Sbjct: 66  EDLREEFVRDFVF---PMFRANTVYEGAYLLGTSIARPLISKRLIEIAKETGADAIAHGA 122

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAI 158
           T         + S Y       I A     
Sbjct: 123 TGKGNDQVRFELSAYALNPDIKIIAPWRDW 152


>gi|134099459|ref|YP_001105120.1| argininosuccinate synthase [Saccharopolyspora erythraea NRRL
          2338]
 gi|291008535|ref|ZP_06566508.1| argininosuccinate synthase [Saccharopolyspora erythraea NRRL
          2338]
 gi|166221014|sp|A4FDS0|ASSY_SACEN RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|133912082|emb|CAM02195.1| argininosuccinate synthase [Saccharopolyspora erythraea NRRL
          2338]
          Length = 472

 Score = 41.8 bits (96), Expect = 0.076,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 25/57 (43%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  ++W  +      T + D GQ ++ ++       +     + +  D
Sbjct: 16 IAFSGGLDTSVAVAWMRENGAVPCTYTADIGQYDESDIASIPGRAEAYGAEISRLVD 72


>gi|150378145|ref|YP_001314740.1| sulfate adenylyltransferase subunit 2 [Sinorhizobium medicae
           WSM419]
 gi|150032692|gb|ABR64807.1| sulfate adenylyltransferase, small subunit [Sinorhizobium medicae
           WSM419]
          Length = 299

 Score = 41.8 bits (96), Expect = 0.076,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 49/180 (27%), Gaps = 15/180 (8%)

Query: 12  LLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           + L+S G+DSS  L  A+  F         L  D   + +  +E R  + +++       
Sbjct: 28  VALYSIGKDSSVLLHLAMKAFYPGKPPFPFLHVDTKWKFREMIEFRDRMARELG------ 81

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              L           G    +  +      ++   L            L  A     +  
Sbjct: 82  -FDLLVHVNQDGIDQGIGPFTHGSNVHTHVMKTMGLRQALEKYGFDAALAGARRDEEKSR 140

Query: 128 ITN-IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I               R +  +   T +  G    V    PL    +++ W+    
Sbjct: 141 AKERIFSIRSAQHGWDPKRQRPEMWKTYNTRVAPGETMRV---FPLSNWTEFDIWQYILR 197


>gi|150376696|ref|YP_001313292.1| sulfate adenylyltransferase subunit 2 [Sinorhizobium medicae
           WSM419]
 gi|150031243|gb|ABR63359.1| sulfate adenylyltransferase, small subunit [Sinorhizobium medicae
           WSM419]
          Length = 299

 Score = 41.8 bits (96), Expect = 0.076,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 49/180 (27%), Gaps = 15/180 (8%)

Query: 12  LLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           + L+S G+DSS  L  A+  F         L  D   + +  +E R  + +++       
Sbjct: 28  VALYSIGKDSSVLLHLAMKAFYPGKPPFPFLHVDTKWKFREMIEFRDRMARELG------ 81

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              L           G    +  +      ++   L            L  A     +  
Sbjct: 82  -FDLLVHVNQDGIDQGIGPFTHGSNVHTHVMKTMGLRQALEKYGFDAALAGARRDEEKSR 140

Query: 128 ITN-IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I               R +  +   T +  G    V    PL    +++ W+    
Sbjct: 141 AKERIFSIRSAQHGWDPKRQRPEMWKTYNTRVAPGETMRV---FPLSNWTEFDIWQYILR 197


>gi|86741855|ref|YP_482255.1| argininosuccinate synthase [Frankia sp. CcI3]
 gi|119361276|sp|Q2J866|ASSY_FRASC RecName: Full=Argininosuccinate synthase; AltName:
           Full=Citrulline--aspartate ligase
 gi|86568717|gb|ABD12526.1| argininosuccinate synthase [Frankia sp. CcI3]
          Length = 400

 Score = 41.8 bits (96), Expect = 0.076,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 31/133 (23%), Gaps = 13/133 (9%)

Query: 7   KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L +SGG D S        +    V  L+ D GQ  +     R            
Sbjct: 1   MTERVVLAYSGGLDTSVAIGWIGAETGADVVALAVDVGQGGEDLEAIRQRA--------- 51

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  E  ++        S  +          D     + +     + +      A  
Sbjct: 52  -LTCGAVESIVVDAREEFAESFVAPAIKSNALYMDRYPLISSLSR--PVIVRHLVAAARE 108

Query: 126 LGITNIVIGVCET 138
            G   I  G    
Sbjct: 109 HGADAIAHGCTGK 121


>gi|332290686|ref|YP_004429295.1| GMP synthase, large subunit [Krokinobacter diaphorus 4H-3-7-5]
 gi|332168772|gb|AEE18027.1| GMP synthase, large subunit [Krokinobacter diaphorus 4H-3-7-5]
          Length = 510

 Score = 41.8 bits (96), Expect = 0.077,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 52/186 (27%), Gaps = 18/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DS+   +         +  +  + G            + +K  E     
Sbjct: 214 DRVILGLSGGVDSTVAATLLHKAIGRNLYCIFVNNG------------LLRK-DEYTQVL 260

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           K   G    +           +L      + +   +   FV              A  LG
Sbjct: 261 KQYEGMGLNVKGVDASARFLEALEGESDPETKRKAIGRVFVEV--FDDESKLVENAKWLG 318

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I   V E+  +        TI++      L     + V  PL  L K E  ++   +
Sbjct: 319 QGTIYPDVIESVSATG--GPSATIKSHHNVGGLPDYMTLKVVEPLRMLFKDEVRRVGASM 376

Query: 188 GGQDLV 193
           G    +
Sbjct: 377 GLSPEL 382


>gi|331698277|ref|YP_004334516.1| sulfate adenylyltransferase small subunit [Pseudonocardia
           dioxanivorans CB1190]
 gi|326952966|gb|AEA26663.1| sulfate adenylyltransferase, small subunit [Pseudonocardia
           dioxanivorans CB1190]
          Length = 300

 Score = 41.8 bits (96), Expect = 0.077,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 50/188 (26%), Gaps = 15/188 (7%)

Query: 12  LLLFSGGQDSSTCLSWALDRF----DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++LFSGG+DS+  +  A+  F         L  D G      +E R  +  K+   +   
Sbjct: 31  VILFSGGKDSTLLVHLAVKAFAPAPVPFPLLHVDTGHNYPEVIEFRDALVAKLGLRLEVA 90

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                  H+      G +   +      ++     +P            VF         
Sbjct: 91  -------HVQDWIDDGRLVERADGTRNPLQ----TVPLLDSIVEKKFDAVFGGGRRDEER 139

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                  +   D  G  D R                       P+    + + W+  Q  
Sbjct: 140 ARAKERVMSLRDAFGRWDPRKQRPELWNLYNGRHAPGEHVRVFPISNWTELDVWRYIQRE 199

Query: 188 GGQDLVNL 195
           G +     
Sbjct: 200 GIELPSIY 207


>gi|326563266|gb|EGE13533.1| sulfate adenylyltransferase subunit 2 [Moraxella catarrhalis
           46P47B1]
          Length = 307

 Score = 41.8 bits (96), Expect = 0.077,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 43/182 (23%), Gaps = 18/182 (9%)

Query: 13  LLFSGGQDSSTCLSWALD----RFDRVE----TLSFDYGQRNKVELECRLCVRKKIVELM 64
           LLFSGG+DS   L+ A      +   V      +  D G  +           +     +
Sbjct: 34  LLFSGGKDSVVLLALARKAFAIKGRDVALPFPLVHIDTG--HNYPEVIAFRDAQ-----V 86

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
                 L   H+      G +     T +         L        + +          
Sbjct: 87  KTLNLRLVVGHVEDSIAKGTVVLRKETDSRNGAQAVTLLETIEAYQFDALMGGARRDEEK 146

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                 I     E         R +         + G    V    P+    + + W+  
Sbjct: 147 ARAKERIFSFRDEFGQWDPKAQRPELWSLYNAKHHQGENMRV---FPISNWTELDIWQYI 203

Query: 185 QD 186
             
Sbjct: 204 AR 205


>gi|325285141|ref|YP_004260931.1| GMP synthase (glutamine-hydrolyzing) [Cellulophaga lytica DSM 7489]
 gi|324320595|gb|ADY28060.1| GMP synthase (glutamine-hydrolyzing) [Cellulophaga lytica DSM 7489]
          Length = 511

 Score = 41.8 bits (96), Expect = 0.077,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 49/186 (26%), Gaps = 18/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  + G   K E    L   K +   +   
Sbjct: 215 DKVVLGLSGGVDSSVAAMLLHKAIGKNLYCIFVNNGLLRKNEFTDVLEQYKGMGLNVKGV 274

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             S        L  L  +S     +    ++      +     + + +L           
Sbjct: 275 DASAR-----FLDALSGLSDPEQKRKAIGRVFIEVFDDEAHQIQGVSWLAQGTIY----- 324

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                      +          TI++      L     + +  PL  L K E  ++   +
Sbjct: 325 -------PDVIESVSATGGPSATIKSHHNVGGLPDFMKLKIVEPLKALFKDEVRRVGASM 377

Query: 188 GGQDLV 193
           G    +
Sbjct: 378 GMAKDL 383


>gi|307103568|gb|EFN51827.1| hypothetical protein CHLNCDRAFT_139672 [Chlorella variabilis]
          Length = 417

 Score = 41.8 bits (96), Expect = 0.077,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 32/115 (27%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           LL SGG DSS  L   +    RV         +         C  ++ +E      + LG
Sbjct: 57  LLLSGGVDSSLALHLLVAAGHRVTAFYLQIWFQEDFRNFWGACPWEEDLEYCRAVCERLG 116

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +  +                  ++      P+     R      +    A  +G
Sbjct: 117 VELQVVPLTEQYWDRVVAHCITEIRHGRTPNPDVLCNSRVKFGAFYEHLSAQAIG 171


>gi|295097951|emb|CBK87041.1| GMP synthase (glutamine-hydrolyzing) [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 525

 Score = 41.8 bits (96), Expect = 0.077,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 45/183 (24%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G     E                + 
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLNE--------------AQQV 273

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D  G+   L +  +                +        V                 L 
Sbjct: 274 MDMFGDHFGLNIVHVEGEQRFLDALKGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLA 333

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I   V E+  S         I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 334 QGTIYPDVIESAASATGKAHV--IKSHHNVGGLPKEMKMGLVEPLRELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|228470931|ref|ZP_04055776.1| GMP synthase [Porphyromonas uenonis 60-3]
 gi|228307328|gb|EEK16342.1| GMP synthase [Porphyromonas uenonis 60-3]
          Length = 506

 Score = 41.8 bits (96), Expect = 0.077,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 49/186 (26%), Gaps = 21/186 (11%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            ++  SGG DSS           D++  +  D+G               ++ E      D
Sbjct: 215 VIMALSGGVDSSVAAVLLHRAIGDQLTCIFVDHG-------------LMRLGEAEQILAD 261

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                       LG I   +  K +       +              VF A         
Sbjct: 262 YKA-------LGLGCIKVDASAKFLDDLAGVRDPEAKRKVIGRDFIEVFEAEAKKLPQAR 314

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +  G    D     +     I++      L    H+ +  PL  L K E  ++   +  
Sbjct: 315 WLGQGTIYPDIIESINITGKVIKSHHNVGGLPERMHLKLVEPLKHLFKDEVRRVGLALAM 374

Query: 190 QDLVNL 195
              +  
Sbjct: 375 PRHMIF 380


>gi|241949633|ref|XP_002417539.1| GMP synthetase, putative; glutamine amidotransferase, putative
           [Candida dubliniensis CD36]
 gi|223640877|emb|CAX45194.1| GMP synthetase, putative [Candida dubliniensis CD36]
          Length = 530

 Score = 41.8 bits (96), Expect = 0.077,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 51/180 (28%), Gaps = 13/180 (7%)

Query: 15  FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
            SGG DS+       +   DR   +  D G   K E E    V+K + E           
Sbjct: 235 VSGGVDSTVGAKIMKEAIGDRFHAIYVDNGVMRKNETES---VKKTLDE------GLGIN 285

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
             ++    L       +T     +    N                  +    L    +  
Sbjct: 286 LTVVDAGDLFLGRLKGVTDPEKKRKIIGNTFIHVFEEEAAKIKPRDGSEIEYLLQGTLYP 345

Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
            V E   S        TI+       L  +  + +  PL  L K E   L + +G  + +
Sbjct: 346 DVIE---SISFKGPSQTIKTHHNVGGLLEDMKLKLIEPLRELFKDEVRHLGELLGVPEDL 402


>gi|153813644|ref|ZP_01966312.1| hypothetical protein RUMOBE_04067 [Ruminococcus obeum ATCC 29174]
 gi|149830260|gb|EDM85353.1| hypothetical protein RUMOBE_04067 [Ruminococcus obeum ATCC 29174]
          Length = 300

 Score = 41.8 bits (96), Expect = 0.077,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 56/183 (30%), Gaps = 16/183 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIV-EL 63
              ++L+S G+DSS  L  AL  F         L  +   + K  +E R    K +  E+
Sbjct: 26  EKPVMLYSIGKDSSVMLHLALKAFYPEKPPFPFLHVNTTWKFKEMIEFRDKTAKDLGIEM 85

Query: 64  MPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA 123
           +    +   +  I P       +    T+ +   +        F  GR            
Sbjct: 86  LEYINEDGVKQGINPFDNGSAYTDIMKTQALKQALNKYGFTAAFGGGRRD--------EE 137

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
                  I     E       + R +  +   T IN G    V    P+    + + W+ 
Sbjct: 138 KSRAKERIFSFRNENHAWDPKNQRPEMWKLYNTEINKGESIRV---FPISNWTEKDIWQY 194

Query: 184 AQD 186
            + 
Sbjct: 195 IKR 197


>gi|126540977|emb|CAM46971.1| asparagine synthetase [Danio rerio]
          Length = 560

 Score = 41.8 bits (96), Expect = 0.077,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 18/60 (30%), Gaps = 4/60 (6%)

Query: 13  LLFSGGQDSSTCLSWALDRFDR---VETL-SFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            L SGG DSS   +  +           + +F  G  +  ++     V   I        
Sbjct: 254 CLLSGGLDSSLVAALLVKLAKEEKLPYPIQTFSIGAEDSPDVAAARKVADYIGSEHHVVN 313


>gi|34541632|ref|NP_906111.1| hypothetical protein PG2046 [Porphyromonas gingivalis W83]
 gi|61216584|sp|Q7MTC4|TILS_PORGI RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase
 gi|34397950|gb|AAQ67010.1| conserved hypothetical protein [Porphyromonas gingivalis W83]
          Length = 454

 Score = 41.8 bits (96), Expect = 0.077,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 48/192 (25%), Gaps = 24/192 (12%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
            L+  SGG DS   L    +          ++  R     E    V +   +L       
Sbjct: 26  VLVALSGGADSVALLCVLRELGYETVAAHCNFHLRGVESDEDAAFVERLCRDLD------ 79

Query: 71  LGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA-TLAYRLGIT 129
               H +    +      S++  +A +         F   R  + + + A          
Sbjct: 80  -VPLHRIDFDTVRYARERSISIEMAAR---ELRYEWFGQLRKELAIEYVAVAHHADDNAE 135

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +V+ +C                               +  PL+   + E      D   
Sbjct: 136 TMVLNLCRGTGISGLCGMPYKRND-------------GIVRPLLDATRDEIEAYLLDQKI 182

Query: 190 QDLVNLILEESH 201
               +   E++ 
Sbjct: 183 TYRTDSSNEDTR 194


>gi|68464843|ref|XP_723499.1| hypothetical protein CaO19.4813 [Candida albicans SC5314]
 gi|68465220|ref|XP_723309.1| hypothetical protein CaO19.12276 [Candida albicans SC5314]
 gi|74587961|sp|Q5APF2|GUAA_CANAL RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|46445336|gb|EAL04605.1| hypothetical protein CaO19.12276 [Candida albicans SC5314]
 gi|46445533|gb|EAL04801.1| hypothetical protein CaO19.4813 [Candida albicans SC5314]
 gi|238878638|gb|EEQ42276.1| GMP synthase [Candida albicans WO-1]
          Length = 530

 Score = 41.8 bits (96), Expect = 0.077,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 51/180 (28%), Gaps = 13/180 (7%)

Query: 15  FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
            SGG DS+       +   DR   +  D G   K E E    V+K + E           
Sbjct: 235 VSGGVDSTVGAKIMKEAIGDRFHAIYVDNGVMRKNETES---VKKTLDE------GLGIN 285

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
             ++    L       +T     +    N                  +    L    +  
Sbjct: 286 LTVVDAGDLFLGRLKGVTDPEKKRKIIGNTFIHVFEEEAAKIKPRDGSEIEYLLQGTLYP 345

Query: 134 GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGGQDLV 193
            V E   S        TI+       L  +  + +  PL  L K E   L + +G  + +
Sbjct: 346 DVIE---SISFKGPSQTIKTHHNVGGLLEDMKLKLIEPLRELFKDEVRHLGELLGVPEDL 402


>gi|320161952|ref|YP_004175177.1| GMP synthase [Anaerolinea thermophila UNI-1]
 gi|319995806|dbj|BAJ64577.1| GMP synthase [glutamine-hydrolyzing] [Anaerolinea thermophila
           UNI-1]
          Length = 518

 Score = 41.8 bits (96), Expect = 0.077,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 48/184 (26%), Gaps = 17/184 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            L   SGG DSS   +       D++  +  D G   K E E      +K          
Sbjct: 215 VLSAVSGGVDSSVATALVHRAVGDQLTAVFVDTGMLRKGEREQVETAFRK------NLGV 268

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            L   + +   +      +       +  +           R            Y     
Sbjct: 269 RLITVNAVEEFLDRLEGVTDPEGKRKIIGETFIRIFEGQARRLGNPPFLVQGTIY----- 323

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
                    + S     +   I++      L  +    +  PL +L K E   + + +G 
Sbjct: 324 -----PDVVESSAPDRQKAHKIKSHHNVGGLPEDMTFQLVEPLRYLFKDEVRLVGEALGL 378

Query: 190 QDLV 193
              +
Sbjct: 379 PPEL 382


>gi|319898074|ref|YP_004136271.1| tRNA(ile)-lysidine synthetase [Haemophilus influenzae F3031]
 gi|317433580|emb|CBY81964.1| tRNA(Ile)-lysidine synthetase [Haemophilus influenzae F3031]
          Length = 430

 Score = 41.8 bits (96), Expect = 0.077,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 24/68 (35%), Gaps = 3/68 (4%)

Query: 12 LLLFSGGQDSSTCL---SWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
          L+  SGG DS+  L   +    +   +  LS      +           K   +L  +++
Sbjct: 20 LIALSGGLDSTVLLSLFAKLRQKQPHLPPLSVRAIHIHHGLSPNADSWAKHCQDLCDQFQ 79

Query: 69 DSLGEDHI 76
            L  + +
Sbjct: 80 IPLIIERV 87


>gi|296875509|ref|ZP_06899581.1| tRNA(Ile)-lysidine synthetase [Streptococcus parasanguinis ATCC
           15912]
 gi|296433433|gb|EFH19208.1| tRNA(Ile)-lysidine synthetase [Streptococcus parasanguinis ATCC
           15912]
          Length = 424

 Score = 41.8 bits (96), Expect = 0.077,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 36/131 (27%), Gaps = 13/131 (9%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWAL---DRFDRVETL--SFDYGQRNKVELECRL-CV 56
           D+       L+  SGG DS   L   L       ++  +    ++GQR + +LE      
Sbjct: 13  DLFTPHRRVLVALSGGLDSM-NLYELLYKNKERLKIHLVLAHVNHGQRPESDLEESELRT 71

Query: 57  RKKIVELMPKWKDSLGED-----HILPLAILGDISH-SSLTKNVAMKIQDNNLPNTFVPG 110
                E         G+                I      T  V     ++    TF+  
Sbjct: 72  LADRRETRIHVAHYSGDFTEAKARTFRYDFFKQIMEKEDCTALVTGHHANDQAETTFMRL 131

Query: 111 RNIIFLVFAAT 121
                L   + 
Sbjct: 132 IRGTKLRHLSG 142


>gi|284048931|ref|YP_003399270.1| tRNA(Ile)-lysidine synthetase [Acidaminococcus fermentans DSM
          20731]
 gi|283953152|gb|ADB47955.1| tRNA(Ile)-lysidine synthetase [Acidaminococcus fermentans DSM
          20731]
          Length = 350

 Score = 41.8 bits (96), Expect = 0.077,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 16/57 (28%), Gaps = 7/57 (12%)

Query: 6  KKAPSALLLFSGGQDSSTCLSWALDRFDR----VETLSFDYGQRNKVELECRLCVRK 58
          K     +   SGG DS         + +     V  +     Q +    E     R+
Sbjct: 19 KPGTKVIAALSGGADSLCLADVMAAQGEEDGVDVLAVHV---QHHLRGEEAEQDARQ 72


>gi|148242801|ref|YP_001227958.1| tRNA-specific 2-thiouridylase MnmA [Synechococcus sp. RCC307]
 gi|205828978|sp|A5GUP6|MNMA_SYNR3 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|147851111|emb|CAK28605.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Synechococcus sp. RCC307]
          Length = 383

 Score = 41.8 bits (96), Expect = 0.077,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 48/187 (25%), Gaps = 17/187 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
              +  SGG DSS   +   D   +VE L+        +      C  + +V+     ++
Sbjct: 27  RVAVGLSGGVDSSLTAALLRDAQWQVEGLTL------WLMSGKGACCAEGLVDAAGLCEE 80

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR-LGI 128
                H++                      D   P         +        A +  GI
Sbjct: 81  LEIPHHVVDSRDTFQQEIVQFLVQ---GYGDGITPLPCSRCNRAVKFGPMLDWAEKERGI 137

Query: 129 TNIVIGVCETDYSGYPDCRHD-------TIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           T +  G            R                  +L       +  PL  L K +T 
Sbjct: 138 TRVATGHYARLRPNADGGRTQLLRGLDARKDQSYFLYDLPQAVLQRLIFPLGELTKPDTR 197

Query: 182 KLAQDIG 188
             A  +G
Sbjct: 198 AEAARLG 204


>gi|145634599|ref|ZP_01790308.1| pyridoxine kinase [Haemophilus influenzae PittAA]
 gi|145268144|gb|EDK08139.1| pyridoxine kinase [Haemophilus influenzae PittAA]
          Length = 430

 Score = 41.8 bits (96), Expect = 0.077,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 24/68 (35%), Gaps = 3/68 (4%)

Query: 12 LLLFSGGQDSSTCL---SWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
          L+  SGG DS+  L   +    +   +  LS      +           K   +L  +++
Sbjct: 20 LIALSGGLDSTVLLSLFAKLRQKQPHLPPLSVRAIHIHHGLSPNADSWAKHCQDLCDQFQ 79

Query: 69 DSLGEDHI 76
            L  + +
Sbjct: 80 IPLIIERV 87


>gi|114771028|ref|ZP_01448468.1| GMP synthase [alpha proteobacterium HTCC2255]
 gi|114548310|gb|EAU51196.1| GMP synthase [alpha proteobacterium HTCC2255]
          Length = 519

 Score = 41.8 bits (96), Expect = 0.077,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 55/184 (29%), Gaps = 24/184 (13%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DSS       +   D++  +  D+G     E        +++V +     +
Sbjct: 225 VICGLSGGVDSSVAAVLLHEAIGDQLTCVFVDHGLLRMGE-------AEEVVTMFRDHYN 277

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                       LG +   S  +                     +F+      A  +G  
Sbjct: 278 MKLIHADEQELFLGQLDGQSDPETK-------------RKIIGKLFIDVFDKYAKPIGAK 324

Query: 130 NIVI---GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +          +   +      TI++      L  +  + +  PL  L K E  +L ++
Sbjct: 325 FLAQGTLYPDVIESVSFSGGPSVTIKSHHNVGGLPEKMDMALVEPLRELFKDEVRELGKE 384

Query: 187 IGGQ 190
           +G  
Sbjct: 385 LGLP 388


>gi|110766606|ref|XP_001120341.1| PREDICTED: asparagine synthetase [glutamine-hydrolyzing] [Apis
           mellifera]
          Length = 528

 Score = 41.8 bits (96), Expect = 0.077,   Method: Composition-based stats.
 Identities = 15/122 (12%), Positives = 29/122 (23%), Gaps = 4/122 (3%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETL----SFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            L SGG DSS   +  +             SF  G  +  ++     V + I     +  
Sbjct: 252 CLLSGGLDSSLIAALLVKHAKDANLSYKIKSFAIGMGDSPDIIAARQVAEYIGTEHHEII 311

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               +   +   ++  +    +T   A                  +            G 
Sbjct: 312 FFENDVIDILDKLIYQLETCDITTIRASIGMYLVSRYIKQNTATTVIFSGEGADELAQGY 371

Query: 129 TN 130
             
Sbjct: 372 IY 373


>gi|1305549|gb|AAC09952.1| asparagine synthetase [Glycine max]
          Length = 579

 Score = 41.8 bits (96), Expect = 0.077,   Method: Composition-based stats.
 Identities = 20/178 (11%), Positives = 46/178 (25%), Gaps = 13/178 (7%)

Query: 13  LLFSGGQDSSTCLSW----------ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +L SGG DSS   +           A     ++   SF  G     +L+    V   I  
Sbjct: 230 VLLSGGLDSSLVAAVTARYLAGTNAAKQWGTKLH--SFCVGLEGAPDLKAAKEVADYIGT 287

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +  ++     +D I  +  +     +     +   I    +            +    + 
Sbjct: 288 VHHEF-HYTVQDGIDAIEDVIYHIETYDVTTIRASIPMFLMSRKIKSLGVKWVISGEGSD 346

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
               G         + ++      +   +   +            +   + +L K   
Sbjct: 347 EIFGGYLYFHKAPNKDEFHQETCRKIKALHKYDCLRANKSTFAWGLEARVPFLDKDFI 404


>gi|301301394|ref|ZP_07207534.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300850999|gb|EFK78743.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 518

 Score = 41.8 bits (96), Expect = 0.078,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 53/186 (28%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           +++ ++  D+G   K E      V   +       
Sbjct: 224 KKVLLGLSGGVDSSVVGVLLHKAIGNQLTSIFVDHGLLRKGE---AEQVMDSLGGKFGLN 280

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G                 +      + G   I +      A   G
Sbjct: 281 IIKVDAKERFLNKLAG---------------VSDPEKKRKIIGNEFIRVFDDEA-AKLEG 324

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G   TD          TI++      L  +    +  PL  L K E  +L + +
Sbjct: 325 IEFLAQGTLYTDIIESGTDTAQTIKSHHNVGGLPEDVQFKLIEPLNTLFKDEVRELGEKL 384

Query: 188 GGQDLV 193
           G    +
Sbjct: 385 GMPHEL 390


>gi|285018226|ref|YP_003375937.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Xanthomonas albilineans GPE PC73]
 gi|283473444|emb|CBA15949.1| probable trna
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           protein [Xanthomonas albilineans]
          Length = 397

 Score = 41.8 bits (96), Expect = 0.078,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 41/197 (20%), Gaps = 16/197 (8%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD------YGQRNKVELECRLCV-----RK 58
             ++  SGG DSS      + +   V  L          G  +                +
Sbjct: 5   RIMVGVSGGVDSSVAAWQLVQQGHTVSGLFMQNWADDGNGDVHDSASIAEDRKPKATTCR 64

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
              +                           +  +   +      PN  V     +    
Sbjct: 65  AEADRRDAVAVCGMLGIPFHFRDFSKEYWQGVFAHFLAEYAAGRTPNPDVLCNREVKFKH 124

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCR-----HDTIRAIETAINLGMESHVTVHTPLM 173
               A  LG   I  G            R                 LG         P+ 
Sbjct: 125 FLDAARDLGAERIATGHYARVAFVDRRWRLLRGLDRNKDQSYFLHQLGQAQLAATLFPVG 184

Query: 174 WLKKYETWKLAQDIGGQ 190
            L K +  ++A+  G  
Sbjct: 185 ELPKEQVRRIARQAGLP 201


>gi|291087307|ref|ZP_06571896.1| tRNA(Ile)-lysidine synthase [Clostridium sp. M62/1]
 gi|291075292|gb|EFE12656.1| tRNA(Ile)-lysidine synthase [Clostridium sp. M62/1]
          Length = 482

 Score = 41.8 bits (96), Expect = 0.078,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 52/197 (26%), Gaps = 16/197 (8%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR----FDRVETLSFDYGQRNKVELECRLCVR 57
           N ++K     ++  SGG DS   LS   D       R+  +   +G R +          
Sbjct: 30  NGMLKAGQRVVVGLSGGADSVCLLSLLTDMRSSLSIRLRAVHVHHGLRGQE--------A 81

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
            +  +   +    L    IL +      + +                      R      
Sbjct: 82  DRDADFSRELCRKLDIPFILKMENAHQEAQNRRISEEEAGRLLRYEAFEQEAARWEEEER 141

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
                A  + I          D S      H    +    +         V  PL+ + +
Sbjct: 142 EQEGAALPVRIAV----AHHGDDSAETILYHLFRGSGLRGLAGIAPVRGRVIRPLLCVSR 197

Query: 178 YETWKLAQDIGGQDLVN 194
            E  +  ++ G   + +
Sbjct: 198 QEILEYLREEGLSYVTD 214


>gi|223040263|ref|ZP_03610541.1| GMP synthase [glutamine-hydrolyzing] (Glutamineamidotransferase)
           (GMP synthetase) [Campylobacter rectus RM3267]
 gi|222878516|gb|EEF13619.1| GMP synthase [glutamine-hydrolyzing] (Glutamineamidotransferase)
           (GMP synthetase) [Campylobacter rectus RM3267]
          Length = 510

 Score = 41.8 bits (96), Expect = 0.078,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 45/187 (24%), Gaps = 19/187 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               L   SGG DSS   +         +  +  D G     E E      +        
Sbjct: 214 NKKVLCAVSGGVDSSVTAALLAAAIPQNLILVFVDNGLLRTGEREQVEATFR-------- 265

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 E   +  +         +T+    +          + G   I +       +  
Sbjct: 266 -TKLGVELVSIDASKTFLERLVGVTEPEKKRK---------IIGETFIEIFEKEAKKHDN 315

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                   +              TI++      L       +  PL  + K E  +L  +
Sbjct: 316 VKFLAQGTLYTDIIESSVAGSSKTIKSHHNVGGLPDWMSFELIEPLREIFKDEVRQLGLE 375

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 376 LGLSREL 382


>gi|254448740|ref|ZP_05062197.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [gamma
           proteobacterium HTCC5015]
 gi|198261581|gb|EDY85869.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [gamma
           proteobacterium HTCC5015]
          Length = 359

 Score = 41.8 bits (96), Expect = 0.078,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 48/181 (26%), Gaps = 12/181 (6%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLC-VRKKIVELMPKWKDSLGE 73
            SGG DSS      L++   VE L        + + +   C     + +      +    
Sbjct: 1   MSGGVDSSVTALTLLEQGYHVEGLFMK--NWEEEDPDSAYCPALIDMKDAQQVCDELEIP 58

Query: 74  DHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVI 133
            H +            + ++   +      PN  V     I        A  LG   I  
Sbjct: 59  LHKVN---FSKEYWDRVFQHFLDEYSAGRTPNPDVMCNKEIKFKAFLDHALGLGADYIAT 115

Query: 134 GVCETDYSGYPDCRHDTIRAIETA------INLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           G             H    A +          LG         P+  + K    ++A + 
Sbjct: 116 GHYVRRVDDEDGRVHLYQGADKNKDQSYFLHTLGQAELSRALFPIGEMDKSHVREMAMNA 175

Query: 188 G 188
           G
Sbjct: 176 G 176


>gi|197105725|ref|YP_002131102.1| sulfate adenylate transferase, subunit 2 [Phenylobacterium zucineum
           HLK1]
 gi|196479145|gb|ACG78673.1| sulfate adenylate transferase, subunit 2 [Phenylobacterium zucineum
           HLK1]
          Length = 317

 Score = 41.8 bits (96), Expect = 0.078,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 50/188 (26%), Gaps = 15/188 (7%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCV 56
           M +++ +    ++L+S G+DS+  L  A   F         L  D   + +   E R  +
Sbjct: 35  MREVVAECERPVMLYSIGKDSAVMLHLAAKAFYPSKPPFPLLHVDTTWKFRAMYEMRERM 94

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
            K++          L           G    +  +       +   L             
Sbjct: 95  AKELG-------FELLVHKNPDAVAQGVNPFTHGSAVHTDVWKTEGLKQALDKYGFDAAF 147

Query: 117 VFAATLAYRLGITN-IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
             A     +      I             + R +  R      N G    V    PL   
Sbjct: 148 GGARRDEEKSRAKERIFSFRSAQHRWDPKNQRPELWRLYNARKNPGESIRV---FPLSNW 204

Query: 176 KKYETWKL 183
            + + W+ 
Sbjct: 205 TELDIWQY 212


>gi|254832460|ref|ZP_05237115.1| hypothetical protein Lmon1_13981 [Listeria monocytogenes 10403S]
          Length = 648

 Score = 41.8 bits (96), Expect = 0.078,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 55/194 (28%), Gaps = 18/194 (9%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRV-ETLSFDYGQRNKVELECRLCVRKKIV 61
           D+I+     L+  SGG DS   L +  +      E +S  +   +++         +++V
Sbjct: 16  DLIRSDDKLLVAVSGGPDSLALLHFLWNSDLVPKEAISVAH-LNHQLRENAAKE--QRVV 72

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           E   + +        + +          L +   +   D           N + L   A 
Sbjct: 73  ETFCERQGIPFYIEEVDIKSRAQSLQKGLEETARIVRYDFFEKVMTEKNINKLVLAHHAD 132

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
                 +  +V G     +SG    R                       P + + K E  
Sbjct: 133 DQIETILMRLVRGSASIGWSGIQPKRELKGGQA--------------IRPFLPITKAEII 178

Query: 182 KLAQDIGGQDLVNL 195
             AQ       ++ 
Sbjct: 179 DYAQKHELAYEIDE 192


>gi|145636327|ref|ZP_01791996.1| putative cell cycle protein MesJ [Haemophilus influenzae PittHH]
 gi|145270492|gb|EDK10426.1| putative cell cycle protein MesJ [Haemophilus influenzae PittHH]
          Length = 301

 Score = 41.8 bits (96), Expect = 0.078,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 8/84 (9%)

Query: 1  MNDIIKKAPSA-----LLLFSGGQDSSTCLSWALD-RFDRVET--LSFDYGQRNKVELEC 52
          ++DI K+   A     L+  SGG DS+  LS     R  +     LS      +      
Sbjct: 4  LSDIEKQLKKATAQAFLIALSGGLDSTVLLSLFAKLRQKQPHLQILSLRAIHIHHGLSPN 63

Query: 53 RLCVRKKIVELMPKWKDSLGEDHI 76
               K    L  +++  L  + +
Sbjct: 64 ADSWAKHCQNLCDQFQIPLIIERV 87


>gi|118602400|ref|YP_903615.1| asparagine synthase (glutamine-hydrolyzing) [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
 gi|118567339|gb|ABL02144.1| asparagine synthase (glutamine-hydrolyzing) [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
          Length = 591

 Score = 41.8 bits (96), Expect = 0.078,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 50/168 (29%), Gaps = 8/168 (4%)

Query: 13  LLFSGGQDSSTCLSWALDRFDR-VETLSF---DYGQRNKVELECRLCVRKKIVELMPKWK 68
           +L SGG DSS  ++   +     V T S    +       E E    +  +      K+ 
Sbjct: 263 VLLSGGLDSSLLVALLREAGHENVRTFSIGFENIDDEVGSEFEYSDQIVAQFKTRHEKYV 322

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            S  +     L  LG+   +     VA       L +  V     + L          G 
Sbjct: 323 ISNSQ----VLPRLGEAVSNMSEPMVAQDAVAFYLLSEQVSKHIKVVLSGQGADEAFAGY 378

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
                   +T        +H   R+ E  +    + + + +    WL 
Sbjct: 379 FWYERMQAQTGSEIERFTKHYVDRSYEEYLQTVNQQYHSNNHTETWLH 426


>gi|14521338|ref|NP_126814.1| asparagine synthetase, putative [Pyrococcus abyssi GE5]
 gi|5458556|emb|CAB50044.1| Asparagine synthase (glutamine-hydrolyzing) (EC 6.3.5.4)
           [Pyrococcus abyssi GE5]
          Length = 479

 Score = 41.8 bits (96), Expect = 0.078,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 3/57 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           ++ +    +LFSGG DSS     A  R+  V   +   G  +  ++E    V +++ 
Sbjct: 234 VRASKKVGVLFSGGVDSSLIALIA-SRYSDVILYT--SGTEDSKDVEWARRVAEELG 287


>gi|294875418|ref|XP_002767312.1| GMP synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239868875|gb|EER00030.1| GMP synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 559

 Score = 41.8 bits (96), Expect = 0.079,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 48/181 (26%), Gaps = 14/181 (7%)

Query: 9   PSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS   +       D+      D G   K E      V++++   +P  
Sbjct: 258 KHVIAAVSGGVDSSVAAALVYRALGDKFHPFMVDTGLLRKNE---AAEVKERLDSHLPGL 314

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                   +L  +         + +    +     L             +         G
Sbjct: 315 NLQ-----VLDASEDFMTKLKDVKEPEKKRKIIGGLFIDSFEKAIHNMNLEPENCVLLQG 369

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                    +   S        TI+       L     + +  PL  L K E  KL  ++
Sbjct: 370 -----TLYPDVIESTSYKGPSTTIKTHHNVGGLPARMKMQILEPLRLLFKDEVRKLGLEL 424

Query: 188 G 188
           G
Sbjct: 425 G 425


>gi|254522025|ref|ZP_05134080.1| tRNA [Stenotrophomonas sp. SKA14]
 gi|219719616|gb|EED38141.1| tRNA [Stenotrophomonas sp. SKA14]
          Length = 428

 Score = 41.8 bits (96), Expect = 0.079,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 22/69 (31%), Gaps = 9/69 (13%)

Query: 12 LLLFSGGQDSSTCLSW----ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
          L+ +SGG DS+  L W    A      +  +   +G              +   +    W
Sbjct: 15 LVGYSGGVDSTVLLHWLWRCAQASGTPLRAVHVHHG-----LQSAADDWVRHCQQQCTTW 69

Query: 68 KDSLGEDHI 76
             L   H+
Sbjct: 70 DIELAVHHV 78


>gi|218547643|ref|YP_002381434.1| tRNA(Ile)-lysidine synthetase [Escherichia fergusonii ATCC 35469]
 gi|218355184|emb|CAQ87791.1| tRNA(Ile)-lysidine synthetase [Escherichia fergusonii ATCC 35469]
          Length = 432

 Score = 41.8 bits (96), Expect = 0.079,   Method: Composition-based stats.
 Identities = 11/76 (14%), Positives = 24/76 (31%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
          +N  +  +   L+ FSGG DS+  L   +        ++      +              
Sbjct: 5  LNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHGLSANADAWVMHC 64

Query: 61 VELMPKWKDSLGEDHI 76
            +  +W   L  + +
Sbjct: 65 ENICHQWHVPLVVERV 80


>gi|158422537|ref|YP_001523829.1| NAD synthetase [Azorhizobium caulinodans ORS 571]
 gi|158329426|dbj|BAF86911.1| NAD+ synthase [Azorhizobium caulinodans ORS 571]
          Length = 566

 Score = 41.8 bits (96), Expect = 0.079,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 3/53 (5%)

Query: 12  LLL-FSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIV 61
           ++L  SGG DS+ C + A+D    +RV  +   Y   ++  L     V +++ 
Sbjct: 301 VVLGLSGGIDSAICAAMAVDALGPERVHCIMLPYRFTSQDSLSDAADVARRLG 353


>gi|332140458|ref|YP_004426196.1| GMP synthase [Alteromonas macleodii str. 'Deep ecotype']
 gi|226738378|sp|B4RV80|GUAA_ALTMD RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|327550480|gb|AEA97198.1| GMP synthase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 525

 Score = 41.8 bits (96), Expect = 0.079,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 49/183 (26%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V +   +     
Sbjct: 228 ERVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEADQVMEMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +    L  L  I    L +                  R           A  L 
Sbjct: 285 IIRVDAEGRF-LDRLKGIEDPELKRKAIGNE----------FVRVFDEEASKLENAKWLA 333

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I   V E+  S         I++      L  +  + +  PL  L K E  K+  ++
Sbjct: 334 QGTIYPDVIESAGSATGKAHV--IKSHHNVGGLPEDMELGLVEPLRELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|327404903|ref|YP_004345741.1| GMP synthase [Fluviicola taffensis DSM 16823]
 gi|327320411|gb|AEA44903.1| GMP synthase (glutamine-hydrolyzing) [Fluviicola taffensis DSM
           16823]
          Length = 515

 Score = 41.8 bits (96), Expect = 0.079,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 18/55 (32%), Gaps = 1/55 (1%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
               +L  SGG DSS             +  +  D G   K E +  L   K + 
Sbjct: 218 NDKVILGLSGGVDSSVAAMILHRAIGSNLHCIFVDNGLLRKNEFDSVLESYKGLG 272


>gi|302038685|ref|YP_003799007.1| putative P-loop ATPase [Candidatus Nitrospira defluvii]
 gi|300606749|emb|CBK43082.1| putative PP-loop ATPase, YdaO type [Candidatus Nitrospira defluvii]
          Length = 305

 Score = 41.8 bits (96), Expect = 0.079,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 22/74 (29%), Gaps = 1/74 (1%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
            +       L+  SGG+DS       L    R + L  + G     E E    VR     
Sbjct: 35  KMFTPEDRILVAVSGGKDSLALWHILLALGYRADALYVNLGIGGYSE-ESHRKVRHYADT 93

Query: 63  LMPKWKDSLGEDHI 76
           +       L    +
Sbjct: 94  VAAAHGAKLIVHVV 107


>gi|296446657|ref|ZP_06888598.1| asparagine synthase [Methylosinus trichosporium OB3b]
 gi|296255885|gb|EFH02971.1| asparagine synthase [Methylosinus trichosporium OB3b]
          Length = 562

 Score = 41.8 bits (96), Expect = 0.079,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 14/41 (34%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKV 48
                   SGG DS+     A +    V  ++ DY  R   
Sbjct: 185 EDRVACFLSGGTDSAIIAFLAREAGMNVVGVTADYAPRRYS 225


>gi|237785434|ref|YP_002906139.1| argininosuccinate synthase [Corynebacterium kroppenstedtii DSM
          44385]
 gi|259585352|sp|C4LIE1|ASSY_CORK4 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|237758346|gb|ACR17596.1| Argininosuccinate synthase [Corynebacterium kroppenstedtii DSM
          44385]
          Length = 398

 Score = 41.8 bits (96), Expect = 0.079,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 19/51 (37%), Gaps = 1/51 (1%)

Query: 7  KAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCV 56
               +L +SGG D+S  +   +      V  +S D GQ  +     R   
Sbjct: 1  MTNRVVLAYSGGLDTSVAIPYLSKMTDGEVVAVSIDLGQGGEDMESVRQRA 51


>gi|254418820|ref|ZP_05032544.1| Phosphoadenosine phosphosulfate reductase family, putative
           [Brevundimonas sp. BAL3]
 gi|196184997|gb|EDX79973.1| Phosphoadenosine phosphosulfate reductase family, putative
           [Brevundimonas sp. BAL3]
          Length = 318

 Score = 41.8 bits (96), Expect = 0.079,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 51/189 (26%), Gaps = 13/189 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVET----LSFDYGQRNKVELECRLCV 56
           M ++  +A   ++L+S G+DS+  L  A   F         L  D   + +     R   
Sbjct: 36  MREVAAEAERPVMLYSIGKDSAVMLHLARKAFYPSTPPFPLLHVDTTWKFRAMYAMREQA 95

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
              +   +   ++       +     G   H+       +   +       + G +  F 
Sbjct: 96  AADLGVELLVHQNPEALARGINPFDHGSALHTD------LWKTEGLKQALTLHGFDAAFG 149

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
                         I             + R +  R   T    G    V    P+    
Sbjct: 150 GARRDEEKSRAKERIFSFRTAEHRWDPKNQRPELWRLYNTRKRPGESIRV---FPISNWT 206

Query: 177 KYETWKLAQ 185
           + + W+   
Sbjct: 207 ELDVWQYIH 215


>gi|124004150|ref|ZP_01688996.1| GMP synthase, C-terminal domain [Microscilla marina ATCC 23134]
 gi|123990220|gb|EAY29719.1| GMP synthase, C-terminal domain [Microscilla marina ATCC 23134]
          Length = 518

 Score = 41.8 bits (96), Expect = 0.079,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 12/37 (32%), Gaps = 1/37 (2%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
               +L  SGG DSS             +  +  D G
Sbjct: 222 NDKVVLGLSGGVDSSVAAVLLHQAIGKNLYAIFVDNG 258


>gi|323136917|ref|ZP_08071997.1| argininosuccinate synthase [Methylocystis sp. ATCC 49242]
 gi|322397678|gb|EFY00200.1| argininosuccinate synthase [Methylocystis sp. ATCC 49242]
          Length = 415

 Score = 41.8 bits (96), Expect = 0.080,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 4/78 (5%)

Query: 6  KKAPSALLLFSGGQDSSTCLSWAL-DRFDRVETLSFDYGQRNKVELECRLCVRKKI---V 61
          K     +L +SGG D+S  L W        V T + D GQ  ++       +   +    
Sbjct: 9  KTVKKVVLAYSGGLDTSIILKWLQTTYGAEVVTFTADLGQGEELGPAREKALLLGVKPEN 68

Query: 62 ELMPKWKDSLGEDHILPL 79
            +   ++    D++ P+
Sbjct: 69 IFIEDLREEFVRDYVFPM 86


>gi|289434353|ref|YP_003464225.1| GMP synthase [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|289170597|emb|CBH27137.1| GMP synthase [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 518

 Score = 41.8 bits (96), Expect = 0.080,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 52/186 (27%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V   +       
Sbjct: 224 KKVLLALSGGVDSSVVGVLIHKAIGDQLTCIFVDHGLLRKGE---ADQVMTTLQGEFNMN 280

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G         +   K +       +V       L          G
Sbjct: 281 IIKVDAKKRFMDKLAG-------VSDPEQKRKIIGNEFIYVFDDEANKL---------DG 324

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +  +  G   TD          TI++      L  +    +  PL  L K E   L  ++
Sbjct: 325 VQFLAQGTLYTDIIESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGTEL 384

Query: 188 GGQDLV 193
           G  D +
Sbjct: 385 GMPDAI 390


>gi|295675780|ref|YP_003604304.1| Sulfate adenylyltransferase [Burkholderia sp. CCGE1002]
 gi|295435623|gb|ADG14793.1| Sulfate adenylyltransferase [Burkholderia sp. CCGE1002]
          Length = 320

 Score = 41.8 bits (96), Expect = 0.080,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 52/195 (26%), Gaps = 19/195 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF---------DRVETLSFDYGQRNKVELE 51
           + +++ +     LLFSGG+DS   L+ AL  F              +  D G      ++
Sbjct: 34  LRELVAECSKPALLFSGGKDSVVVLALALKAFGLGANRKTQLPFPLVHIDTGHNYDEVID 93

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
            R    ++I          L   H+      G +     T +         L      G 
Sbjct: 94  FRDRRAQEIGA-------ELVVGHVEDSIKRGTVRLRRETDSRNAAQAVTLLETIEQYGY 146

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
             +                I     E         R +        ++ G    V    P
Sbjct: 147 TAMIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHNGEHMRV---FP 203

Query: 172 LMWLKKYETWKLAQD 186
           +    + + W+    
Sbjct: 204 ISNWTELDVWQYIAR 218


>gi|209519253|ref|ZP_03268055.1| Sulfate adenylyltransferase [Burkholderia sp. H160]
 gi|209500333|gb|EEA00387.1| Sulfate adenylyltransferase [Burkholderia sp. H160]
          Length = 320

 Score = 41.8 bits (96), Expect = 0.080,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 52/195 (26%), Gaps = 19/195 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF---------DRVETLSFDYGQRNKVELE 51
           + +++ +     LLFSGG+DS   L+ AL  F              +  D G      ++
Sbjct: 34  LRELVAECSKPALLFSGGKDSVVVLALALKAFGLGANRKTKLPFPLVHIDTGHNYDEVID 93

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
            R    ++I          L   H+      G +     T +         L      G 
Sbjct: 94  FRDRRAQEIGA-------ELVVGHVEDSIKRGTVRLRRETDSRNAAQAVTLLETIEQYGY 146

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
             +                I     E         R +        ++ G    V    P
Sbjct: 147 TAMIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHNGEHMRV---FP 203

Query: 172 LMWLKKYETWKLAQD 186
           +    + + W+    
Sbjct: 204 ISNWTELDVWQYIAR 218


>gi|118474467|ref|YP_892648.1| PP-loop family protein [Campylobacter fetus subsp. fetus 82-40]
 gi|261886379|ref|ZP_06010418.1| PP-loop family protein [Campylobacter fetus subsp. venerealis str.
           Azul-94]
 gi|118413693|gb|ABK82113.1| PP-loop family protein [Campylobacter fetus subsp. fetus 82-40]
          Length = 250

 Score = 41.8 bits (96), Expect = 0.080,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 34/128 (26%), Gaps = 13/128 (10%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALD------RFDRVETLSFDYGQRNKVELECRLC 55
             + +K    LL  SGG+DS                    E ++  YG           C
Sbjct: 19  YKMFEKNDKILLGLSGGKDSLALAHILKHFQNVTPDKFEFEAVTLSYGMGEDYAYLTAHC 78

Query: 56  VRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIF 115
                       K S+ +  I  ++      +SS     +   +          G N + 
Sbjct: 79  -------EKHGIKHSVIDSSIFEISKDKIRKNSSFCSFFSRMRRGYLYTYALEHGFNKLA 131

Query: 116 LVFAATLA 123
           +      A
Sbjct: 132 IAHHLDDA 139


>gi|466934|gb|AAC43222.1| guaA [Mycobacterium leprae]
          Length = 590

 Score = 41.8 bits (96), Expect = 0.080,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
           A+   SGG DS+   +       DR+  +  D+G
Sbjct: 289 AICGLSGGVDSAVAAALVQRAIGDRLTCIFVDHG 322


>gi|15827120|ref|NP_301383.1| GMP synthase [Mycobacterium leprae TN]
 gi|221229598|ref|YP_002503014.1| GMP synthase [Mycobacterium leprae Br4923]
 gi|13638206|sp|P46810|GUAA_MYCLE RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|254800107|sp|B8ZUE2|GUAA_MYCLB RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|13092668|emb|CAC29903.1| putative GMP synthase [Mycobacterium leprae]
 gi|219932705|emb|CAR70488.1| putative GMP synthase [Mycobacterium leprae Br4923]
          Length = 529

 Score = 41.8 bits (96), Expect = 0.080,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
           A+   SGG DS+   +       DR+  +  D+G
Sbjct: 228 AICGLSGGVDSAVAAALVQRAIGDRLTCIFVDHG 261


>gi|326523047|dbj|BAJ88564.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 581

 Score = 41.8 bits (96), Expect = 0.081,   Method: Composition-based stats.
 Identities = 20/178 (11%), Positives = 46/178 (25%), Gaps = 13/178 (7%)

Query: 13  LLFSGGQDSSTCLSWALDR----------FDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +L SGG DSS   + A               R+   SF  G     +L+    V   +  
Sbjct: 230 VLLSGGLDSSLVAAVAARHFAGTKAAKRWGTRLH--SFCVGLEGSPDLKAAKEVADHLGT 287

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +  ++     +D I  +  +     +     +        +          + +      
Sbjct: 288 VHHEFN-FTVQDGIDAIEDVIYHIETYDVTTIRASTLMFQMSRKIKALGVKMVISGEGAD 346

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
               G         + ++      +   +   +        S   +   + +L K   
Sbjct: 347 EIFGGYLYFHKAPNKEEFHQETCRKIKALHQYDCLRANKATSAWGLEVRVPFLDKEFI 404


>gi|308274580|emb|CBX31179.1| hypothetical protein N47_E46910 [uncultured Desulfobacterium sp.]
          Length = 343

 Score = 41.8 bits (96), Expect = 0.081,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 2  NDIIKKAPS--ALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
           ++I       AL L SGG DS         +   VE ++F
Sbjct: 10 YNMINYPKKVRALGLCSGGLDSILAALILRKQQIEVEWITF 50


>gi|288927672|ref|ZP_06421519.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidine synthetase)
          (tRNA(Ile)-2-lysyl-cytidine synthase) [Prevotella sp.
          oral taxon 317 str. F0108]
 gi|288330506|gb|EFC69090.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidine synthetase)
          (tRNA(Ile)-2-lysyl-cytidine synthase) [Prevotella sp.
          oral taxon 317 str. F0108]
          Length = 453

 Score = 41.8 bits (96), Expect = 0.081,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 26/72 (36%), Gaps = 1/72 (1%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          +++  +   L+  SGG DS       L    +V+ +  ++  R + E        + +  
Sbjct: 16 NLLSASGRYLVALSGGADSVALFRMLLRLDYKVDAVHCNFKLRGE-ESFRDEAFCENLCR 74

Query: 63 LMPKWKDSLGED 74
                 ++  D
Sbjct: 75 EHGVAFHTVHFD 86


>gi|212711374|ref|ZP_03319502.1| hypothetical protein PROVALCAL_02446 [Providencia alcalifaciens DSM
           30120]
 gi|212686103|gb|EEB45631.1| hypothetical protein PROVALCAL_02446 [Providencia alcalifaciens DSM
           30120]
          Length = 302

 Score = 41.8 bits (96), Expect = 0.081,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 50/176 (28%), Gaps = 13/176 (7%)

Query: 12  LLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++L+S G+DSS  L  A   F         L  D G + +   + R    +K    +   
Sbjct: 31  VMLYSIGKDSSVMLHLARKAFYPGTIPFPLLHVDTGWKFREMYQFRDETAQKYGFELLIH 90

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           ++  GE   +   + G   H+ + K   +K             +      F         
Sbjct: 91  RNPEGERLGINPFVHGSAKHTDIMKTEGLKQA---------LDKYGFDAAFGGARRDEEK 141

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
                      D S   D ++              +       PL    + + W+ 
Sbjct: 142 SRAKERIYSFRDRSHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTELDIWQY 197


>gi|309807684|ref|ZP_07701623.1| tRNA-specific 2-thiouridylase MnmA domain protein [Lactobacillus
          iners LactinV 01V1-a]
 gi|308169058|gb|EFO71137.1| tRNA-specific 2-thiouridylase MnmA domain protein [Lactobacillus
          iners LactinV 01V1-a]
          Length = 56

 Score = 41.8 bits (96), Expect = 0.081,   Method: Composition-based stats.
 Identities = 7/31 (22%), Positives = 12/31 (38%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
            ++  SGG DSS       ++   V  +  
Sbjct: 8  RVVVGMSGGVDSSVSALLLKEQGYDVVGVFM 38


>gi|302529511|ref|ZP_07281853.1| argininosuccinate synthase [Streptomyces sp. AA4]
 gi|302438406|gb|EFL10222.1| argininosuccinate synthase [Streptomyces sp. AA4]
          Length = 482

 Score = 41.8 bits (96), Expect = 0.081,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 25/57 (43%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  ++W  D+     T + D GQ ++ ++             + +  D
Sbjct: 16 IAFSGGLDTSVAVAWMRDKGAVPCTYTADIGQYDEPDIASVPGRAHAYGAELARLVD 72


>gi|121608224|ref|YP_996031.1| GMP synthase [Verminephrobacter eiseniae EF01-2]
 gi|121552864|gb|ABM57013.1| GMP synthase (glutamine-hydrolyzing) [Verminephrobacter eiseniae
           EF01-2]
          Length = 539

 Score = 41.8 bits (96), Expect = 0.081,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 55/184 (29%), Gaps = 17/184 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +        ++  +  D+G     E +        +     + + 
Sbjct: 230 VILGLSGGVDSSVAAALIQRAIGAQLTCVFVDHGLLRLNEGDMV------MDMFAGRLQA 283

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +            +   S L      + +   +   F+           A  A   G T
Sbjct: 284 RVIR------VDASESFLSRLAGVSDPEAKRKIIGGLFIEVFKTEAAKLKANNAEHRGAT 337

Query: 130 NIVI---GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
            +          +  G    +  TI++      L  +  + +  PL  L K E  +L   
Sbjct: 338 FLAQGTIYPDVIESGGAKSKKAVTIKSHHNVGGLPEQLGLKLLEPLRDLFKDEVRELGLA 397

Query: 187 IGGQ 190
           +G  
Sbjct: 398 LGLP 401


>gi|91788306|ref|YP_549258.1| GMP synthase [Polaromonas sp. JS666]
 gi|91697531|gb|ABE44360.1| GMP synthase (glutamine-hydrolyzing) [Polaromonas sp. JS666]
          Length = 539

 Score = 41.8 bits (96), Expect = 0.081,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 55/186 (29%), Gaps = 19/186 (10%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       D++  +  D+G               ++ E       
Sbjct: 230 VILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHG-------------LLRLNEGDMVMDM 276

Query: 70  SLGEDH-ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +G+ H  +      +     L      + +   +   FV           A      G 
Sbjct: 277 FVGKLHARVVRVDASEQFLGHLAGVSEPEAKRKIIGREFVEVFKAEAARLKAGDGGHKGA 336

Query: 129 TNIVI---GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
             +          +  G    +  TI++      L  +  + +  PL  L K E  +L  
Sbjct: 337 KWLAQGTIYPDVIESGGAKSKKAVTIKSHHNVGGLPEQLGLKLLEPLRELFKDEVRELGV 396

Query: 186 DIGGQD 191
            +G   
Sbjct: 397 ALGLPH 402


>gi|56459688|ref|YP_154969.1| GMP synthase [Idiomarina loihiensis L2TR]
 gi|81362762|sp|Q5QWW5|GUAA_IDILO RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|56178698|gb|AAV81420.1| GMP synthase [Idiomarina loihiensis L2TR]
          Length = 525

 Score = 41.8 bits (96), Expect = 0.081,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 51/184 (27%), Gaps = 17/184 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +L  SGG DSS           +++  +  D G    + L     V +   +    
Sbjct: 227 SDKVILGLSGGVDSSVTAMLLHRAIGEQLTCVFVDNG---LLRLNEAEQVMEMFGDHYGL 283

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +  +    L  L   +     + +                  + +L          
Sbjct: 284 NILPIRAEDRF-LDALAGENDPEKKRKIIGNTFIEIFDEEAGKLTEVDWLAQGTIY---- 338

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                       + +G    +   I++      L  +  + +  PL  L K E  K+  +
Sbjct: 339 --------PDVIESAGSKTGKAHVIKSHHNVGGLPEDMKLGLVEPLRELFKDEVRKIGLE 390

Query: 187 IGGQ 190
           +G  
Sbjct: 391 LGLP 394


>gi|332703890|ref|ZP_08423978.1| tRNA(Ile)-lysidine synthase [Desulfovibrio africanus str. Walvis
          Bay]
 gi|332554039|gb|EGJ51083.1| tRNA(Ile)-lysidine synthase [Desulfovibrio africanus str. Walvis
          Bay]
          Length = 340

 Score = 41.8 bits (96), Expect = 0.082,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 19/53 (35%), Gaps = 4/53 (7%)

Query: 7  KAPSALLLFSGGQDSSTCL----SWALDRFDRVETLSFDYGQRNKVELECRLC 55
          K    L+  SGG DS+  L      A      +     D+G R +   +   C
Sbjct: 34 KGKRLLVALSGGADSTALLYCLRYLAPRMCISLLAAHVDHGLRPESGQDAAYC 86


>gi|320539255|ref|ZP_08038925.1| putative NAD+ synthetase [Serratia symbiotica str. Tucson]
 gi|320030647|gb|EFW12656.1| putative NAD+ synthetase [Serratia symbiotica str. Tucson]
          Length = 540

 Score = 41.8 bits (96), Expect = 0.082,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 53/191 (27%), Gaps = 3/191 (1%)

Query: 11  ALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           A+L  SGG DS+  L+ A+D    D V+ L   +     + +       + +        
Sbjct: 283 AVLGLSGGIDSALTLAIAVDALGKDSVQALMMPFRYTADISIADAKEEAEILGVEFDIVS 342

Query: 69  DSLGEDHIL-PLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                D  +  L+ +   +    T+          +       R  I L         +G
Sbjct: 343 IEPMFDAFIGQLSPMFAGTERDTTEENLQARCRGVILMALSNKRRSIVLTTGNKSEMAVG 402

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   +           +    +  E    +       V       +          +
Sbjct: 403 YATLYGDMAGGFDVLKDVPKTLVFKLSEYRNGVSYVIPQRVIERPPSAELAPDQSDQDSL 462

Query: 188 GGQDLVNLILE 198
              D+++ ILE
Sbjct: 463 PPYDILDAILE 473


>gi|313885656|ref|ZP_07819405.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619021|gb|EFR30461.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Eremococcus coleocola ACS-139-V-Col8]
          Length = 518

 Score = 41.8 bits (96), Expect = 0.082,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 56/187 (29%), Gaps = 21/187 (11%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS           D++  +  D+G   K E +  +   ++    + +
Sbjct: 224 NRKVLLGLSGGVDSSVVGVLLQKAIGDQLVCIFVDHGLLRKNEGDSVMATLEQFGLHIIR 283

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                          LG ++  +  +                   N    VF    +   
Sbjct: 284 VDAKD--------RFLGKLAGVADPE------------RKRKIIGNEFVYVFDDEASKLN 323

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           GI  +  G   TD          TI++      L  +    +  PL  L K E   L + 
Sbjct: 324 GIDFLAQGTLYTDVIESGTDSAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRALGEA 383

Query: 187 IGGQDLV 193
           +G    +
Sbjct: 384 LGMPHNI 390


>gi|326804523|ref|YP_004327394.1| putative uncharacterised protein [Salmonella phage Vi01]
 gi|301795173|emb|CBW37891.1| putative uncharacterised protein [Salmonella phage Vi01]
          Length = 220

 Score = 41.8 bits (96), Expect = 0.082,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 4/67 (5%)

Query: 12 LLLF-SGGQDSSTCLSWALDRFDRVETLSF---DYGQRNKVELECRLCVRKKIVELMPKW 67
          + LF SGG DS+  L W L +   V T+     +   ++K E   R  +   I +  P  
Sbjct: 30 VTLFWSGGVDSTYMLVWLLSKGYSVHTVYCHLENNNFKSKRENWARNKIYNWINKNAPLL 89

Query: 68 KDSLGED 74
                 
Sbjct: 90 MHRWTHH 96


>gi|295115772|emb|CBL36619.1| argininosuccinate synthase [butyrate-producing bacterium SM4/1]
          Length = 409

 Score = 41.8 bits (96), Expect = 0.082,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 52/212 (24%), Gaps = 23/212 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L +SGG D++  + W  + F   V     D GQ    E    L  R K+     
Sbjct: 1   MKEKVILAYSGGLDTTAIIPWLKEHFDYEVICCCIDCGQ---GEELTGLEERAKLSGASK 57

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            + + + +D             + +   V       N                   +A +
Sbjct: 58  LYVEDIVDD----------FCDNYIVPCVQAGAVYENKYLLGTSMARPGIAKKLVEIARK 107

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G + I  G                  A +  I                  + +     +
Sbjct: 108 EGASAICHGATGKGNDQIRFELGIKALAPDLKIIAPWRMTD----VWTMQSRQDEIDYCK 163

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
             G     +       + Y   R+  +    G
Sbjct: 164 AHGIDLPFSAD-----SSYSRDRNLWHISHEG 190


>gi|227891440|ref|ZP_04009245.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Lactobacillus salivarius ATCC 11741]
 gi|227866587|gb|EEJ74008.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Lactobacillus salivarius ATCC 11741]
          Length = 521

 Score = 41.8 bits (96), Expect = 0.082,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 53/186 (28%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           +++ ++  D+G   K E      V   +       
Sbjct: 227 KKVLLGLSGGVDSSVVGVLLHKAIGNQLTSIFVDHGLLRKGE---AEQVMDSLGGKFGLN 283

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G                 +      + G   I +      A   G
Sbjct: 284 IIKVDAKERFLNKLAGVF---------------DPEKKRKIIGNEFIRVFDDEA-AKLEG 327

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G   TD          TI++      L  +    +  PL  L K E  +L + +
Sbjct: 328 IEFLAQGTLYTDIIESGTDTAQTIKSHHNVGGLPEDVQFKLIEPLNTLFKDEVRELGEKL 387

Query: 188 GGQDLV 193
           G    +
Sbjct: 388 GMPHEL 393


>gi|227489338|ref|ZP_03919654.1| tRNA(Ile)-lysidine synthetase [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227090711|gb|EEI26023.1| tRNA(Ile)-lysidine synthetase [Corynebacterium glucuronolyticum
           ATCC 51867]
          Length = 270

 Score = 41.8 bits (96), Expect = 0.082,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 32/119 (26%), Gaps = 2/119 (1%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYG-QRNKVE-LECRLCVRKKIVELMPKWKDSLG 72
            SGG DS    +  +     V  L  D+G Q    E  E    + +           ++ 
Sbjct: 5   LSGGPDSLALTAALVAEGVHVTALCIDHGLQDGSREVSEEAARIARSWGAEARVIPINVD 64

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
                        + +     V +    ++L  TF+              A   G   I
Sbjct: 65  PPTESAARQARYRAFAEWGGPVCVAHTMDDLAETFLIAGLRGMTCGMRETAEVEGAQII 123


>gi|3372|emb|CAA30106.1| unnamed protein product [Saccharomyces cerevisiae]
          Length = 57

 Score = 41.8 bits (96), Expect = 0.082,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 5/59 (8%)

Query: 5  IKKAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          + K    + L +SGG D+S  L+W LD+   V     + GQ  + + +    +  KI  
Sbjct: 1  MSKGK--VCLAYSGGLDTSVILAWLLDQATEVVAFMANVGQ--EEDFDAAKVLALKIGA 55


>gi|16125867|ref|NP_420431.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Caulobacter crescentus CB15]
 gi|221234629|ref|YP_002517065.1| GMP synthase [Caulobacter crescentus NA1000]
 gi|24211765|sp|Q9A7U9|GUAA_CAUCR RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|254800091|sp|B8GVI7|GUAA_CAUCN RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|13423021|gb|AAK23599.1| GMP synthase [Caulobacter crescentus CB15]
 gi|220963801|gb|ACL95157.1| GMP synthase (glutamine-hydrolyzing) [Caulobacter crescentus
           NA1000]
          Length = 520

 Score = 41.8 bits (96), Expect = 0.082,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 52/183 (28%), Gaps = 23/183 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS       +   D++  +  D G   K E         ++V L     
Sbjct: 224 KVICGLSGGVDSSVAAVLIHEAIGDQLTCVFVDTGLLRKNE-------ADQVVTLFRDHY 276

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +            LG+++  S  +                 GR  I +      A   G 
Sbjct: 277 NIPLVHVDAGDLFLGELAGVSDPETKRK-----------TIGRLFIDVFDKEA-AKIEGA 324

Query: 129 TNIVI---GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           T +          +           I++      L     + +  PL  L K E   L  
Sbjct: 325 TFLAQGTLYPDVVESVSARGGPSAVIKSHHNVGGLPDYMKLKLVEPLRELFKDEVRALGV 384

Query: 186 DIG 188
           ++G
Sbjct: 385 ELG 387


>gi|146295195|ref|YP_001178966.1| NAD+ synthetase [Caldicellulosiruptor saccharolyticus DSM 8903]
 gi|145408771|gb|ABP65775.1| NH(3)-dependent NAD(+) synthetase [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 540

 Score = 41.8 bits (96), Expect = 0.082,   Method: Composition-based stats.
 Identities = 17/147 (11%), Positives = 36/147 (24%), Gaps = 2/147 (1%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIVELMP 65
              A++  SGG DSS     A++       L      R   E   +    + + +     
Sbjct: 285 TKKAVVGLSGGIDSSVVCCLAVEALGPENVLGVAMPSRYSSEHSIKDAKSLAENLGIEFR 344

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            +         L +    ++    L +         N+        N + L         
Sbjct: 345 IYPIEDVFKAYLRMFNTSEMPLQDLAEENIQARIRGNILMFISNRENRLVLTTGNKSELA 404

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIR 152
           +G   +   +           +     
Sbjct: 405 VGYCTLYGDMAGGLAVISDLPKMLVYE 431


>gi|323499811|ref|ZP_08104770.1| GMP synthase [Vibrio sinaloensis DSM 21326]
 gi|323315052|gb|EGA68104.1| GMP synthase [Vibrio sinaloensis DSM 21326]
          Length = 517

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 52/181 (28%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS           D++  +  D G     E +              +  D
Sbjct: 222 VILGLSGGVDSSVVAMLVHRAIGDKLTCVFVDNGLLRLNEGQ--------------QVMD 267

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+   L +  +                ++       V              A  L   
Sbjct: 268 MFGDQFGLNIIKVDAEERFLKALEGKSDPEEKRKTIGHVFVDVFDEESKKRANAKWLAQG 327

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S     +   I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 328 TIYPDVIESAAS--KTGKAHVIKSHHNVGGLPDDMEMGLVEPLRELFKDEVRKIGLELGL 385

Query: 190 Q 190
            
Sbjct: 386 P 386


>gi|313681435|ref|YP_004059173.1| tRNA(ile)-lysidine synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313154295|gb|ADR32973.1| tRNA(Ile)-lysidine synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 338

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 42/150 (28%), Gaps = 22/150 (14%)

Query: 1   MNDIIK----KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
           M+ ++     +    LL FSGG DS+      L+     +    +Y  R     +     
Sbjct: 1   MSKLLHLDRLREGRVLLAFSGGVDSTALFHLLLENNIAFDIAHVNYHTRETS--DAEEKN 58

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
            +++                     L   +HS     +  + +       F         
Sbjct: 59  AERLAARH----------------SLQCYAHSCRLGGINFEHRAREERYRFFGYLMKKHG 102

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDC 146
                 A++L      + +     SG P+ 
Sbjct: 103 YTYLLTAHQLNDRLEWLMMQICRGSGLPEM 132


>gi|217965695|ref|YP_002351373.1| bifunctional protein TilS/hprT [Listeria monocytogenes HCC23]
 gi|217334965|gb|ACK40759.1| bifunctional protein TilS/hprT [Listeria monocytogenes HCC23]
 gi|307569758|emb|CAR82937.1| bifunctional protein TilS/HprT [Listeria monocytogenes L99]
          Length = 648

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 53/194 (27%), Gaps = 18/194 (9%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRV-ETLSFDYGQRNKVELECRLCVRKKIV 61
           D+I+     L+  SGG DS   L +  +      E +S  +   +  E        + +V
Sbjct: 16  DLIRSDDKLLVAVSGGPDSLALLHFLWNSDLVPKEAISVAHLNHHLRENAANE---QNVV 72

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           E   +          + +    +     + +   +   D           N + L   A 
Sbjct: 73  ETFCERHGIPFYIEEVDIKSRAESLQKGIEETARIVRYDFFEKVMAEKNINKLALAHHAD 132

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
                 +  +V G     +SG    R                       P + + K E  
Sbjct: 133 DQIETILMRLVRGSASIGWSGIQPKREVKGG--------------YAIRPFLPITKAEII 178

Query: 182 KLAQDIGGQDLVNL 195
             AQ       ++ 
Sbjct: 179 AYAQKHELAYEIDE 192


>gi|209885588|ref|YP_002289445.1| glutamine-hydrolyzing GMP synthase [Oligotropha carboxidovorans
           OM5]
 gi|226739651|sp|B6JHM4|GUAA_OLICO RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|209873784|gb|ACI93580.1| glutamine-hydrolyzing GMP synthase [Oligotropha carboxidovorans
           OM5]
          Length = 531

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 56/183 (30%), Gaps = 17/183 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+       +   D++  +  D+G     E        + +V L     
Sbjct: 235 RVICGLSGGVDSAVAAVLIHEAIGDQLTCVFVDHGLLRMAE-------AETVVSLFRDHY 287

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
           +            LG++   +   +  +K +        V       +  A  LA     
Sbjct: 288 NIPLVHVDASKTFLGEL---AGVTDPELKRKTIGRLFIDVFDEEAKKIGGADFLAQGT-- 342

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
               +     +   +      TI++      L     + +  PL  L K E   L +++G
Sbjct: 343 ----LYPDVIESVSFTGGPSVTIKSHHNVGGLPARMKMKLVEPLRELFKDEVRALGRELG 398

Query: 189 GQD 191
             D
Sbjct: 399 LPD 401


>gi|77920011|ref|YP_357826.1| argininosuccinate synthase [Pelobacter carbinolicus DSM 2380]
 gi|119361301|sp|Q3A1V1|ASSY_PELCD RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|77546094|gb|ABA89656.1| argininosuccinate synthase [Pelobacter carbinolicus DSM 2380]
          Length = 406

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 9  PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQ 44
            A+L +SGG D+S  + W ++     V   + D GQ
Sbjct: 8  KKAVLAYSGGLDTSIIVRWLIEEYGCEVIAFAADVGQ 44


>gi|78042874|ref|YP_358976.1| asparagine synthase [Carboxydothermus hydrogenoformans Z-2901]
 gi|77994989|gb|ABB13888.1| asparagine synthase (glutamine-hydrolyzing) [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 612

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 25/203 (12%), Positives = 46/203 (22%), Gaps = 18/203 (8%)

Query: 14  LFSGGQDSST----CLSWALDRFDRVETLSFDYGQRNKVELECRLC----------VRKK 59
           L SGG DS+       S    R + + T S DY +      E              V K+
Sbjct: 263 LLSGGLDSTVITAFAASHLHSRGETLNTFSVDYAENELYFTESAFQPNCDAMFIPLVAKE 322

Query: 60  IVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
              L      +  E        L       +    +       L +  +     + L   
Sbjct: 323 FNTLHRNIVLTQEELFEALFPALIARDLPGMVDIDSSLW----LFSREIKKEATVGLSGE 378

Query: 120 ATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYE 179
                  G             +       D  + +     +                  E
Sbjct: 379 CADEIFGGYPWFFRKEALEAKTFPWALSLDRRKTLFRQDLIAELKPDEYVQKRYHEALEE 438

Query: 180 TWKLAQDIGGQDLVNLILEESHT 202
             +++     +  +  I   + T
Sbjct: 439 IPEISGLSPEEKRLREITYLTLT 461


>gi|87307823|ref|ZP_01089966.1| GMP synthase [Blastopirellula marina DSM 3645]
 gi|87289437|gb|EAQ81328.1| GMP synthase [Blastopirellula marina DSM 3645]
          Length = 529

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 53/186 (28%), Gaps = 17/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DS+   +        ++  +  D G   K E E        I E    +
Sbjct: 232 NRVICGLSGGVDSAVVAALLYQAIGPQLSCILVDNGLLRKQEAESV------IAEFTKHF 285

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           K  L   H++      D     L      + +   +   FV       L          G
Sbjct: 286 KTDL---HVVD---AKDQFLKELAGITEPQEKRRRIGYQFVECFKAEALKIKDAKFLAQG 339

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                +        G       TI+       L  E    +  PL  L K E  KL  ++
Sbjct: 340 TLYPDVIESGAALDGP----AATIKLHHNVGGLPKELGFELIEPLRDLFKDEVRKLGLEL 395

Query: 188 GGQDLV 193
           G  + +
Sbjct: 396 GLPEDL 401


>gi|326510303|dbj|BAJ87368.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326531156|dbj|BAK04929.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 581

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 20/178 (11%), Positives = 46/178 (25%), Gaps = 13/178 (7%)

Query: 13  LLFSGGQDSSTCLSWALDR----------FDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +L SGG DSS   + A               R+   SF  G     +L+    V   +  
Sbjct: 230 VLLSGGLDSSLVAAVAARHFAGTKAAKRWGTRLH--SFCVGLEGSPDLKAAKEVADHLGT 287

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +  ++     +D I  +  +     +     +        +          + +      
Sbjct: 288 VHHEFN-FTVQDGIDAIEDVIYHIETYDVTTIRASTLMFQMSRKIKALGVKMVISGEGAD 346

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
               G         + ++      +   +   +        S   +   + +L K   
Sbjct: 347 EIFGGYLYFHKAPNKEEFHQETCRKIKALHQYDCLRANKATSAWGLEVRVPFLDKEFI 404


>gi|325134322|gb|EGC56968.1| sulfate adenylyltransferase, small subunit [Neisseria meningitidis
           M13399]
 gi|325144429|gb|EGC66729.1| sulfate adenylyltransferase, small subunit [Neisseria meningitidis
           M01-240013]
          Length = 307

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 18/170 (10%), Positives = 42/170 (24%), Gaps = 10/170 (5%)

Query: 13  LLFSGGQDSSTCLSWALDR---FDRVE-----TLSFDYGQRNKVELECRLCVRKKIVELM 64
           LLFSGG+DS   L+ A        R        +  D G      +  R     K+   +
Sbjct: 34  LLFSGGKDSVVLLALACKAFRLGSRPVKLPFPLVHIDTGHNYPEVIAFRDAQAAKLNARL 93

Query: 65  --PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
              + +DS+ +  ++        + +     +     +          R+         +
Sbjct: 94  IVGRVEDSIAKGTVVLRKETDSRNAAQAVTLLETIEANGFDALMGGARRDEEKARAKERI 153

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
                         +                      +   + + +   +
Sbjct: 154 FSFRDEFGQWDPKAQRPELWSLYNTRLHKGENMRVFPISNWTELDIWQYI 203


>gi|325962881|ref|YP_004240787.1| argininosuccinate synthase [Arthrobacter phenanthrenivorans
          Sphe3]
 gi|323468968|gb|ADX72653.1| argininosuccinate synthase [Arthrobacter phenanthrenivorans
          Sphe3]
          Length = 401

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 16/51 (31%), Gaps = 1/51 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
               +L +SGG D S             V  ++ D GQ  +     R   
Sbjct: 1  MTERIVLAYSGGLDTSVAIGWIGEATGAEVIAVAVDVGQGGESLETIRQRA 51


>gi|322390535|ref|ZP_08064053.1| tRNA(Ile)-lysidine synthetase [Streptococcus parasanguinis ATCC
           903]
 gi|321142809|gb|EFX38269.1| tRNA(Ile)-lysidine synthetase [Streptococcus parasanguinis ATCC
           903]
          Length = 424

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 36/131 (27%), Gaps = 13/131 (9%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWAL---DRFDRVETL--SFDYGQRNKVELECRL-CV 56
           D+       L+  SGG DS   L   L       ++  +    ++GQR + +LE      
Sbjct: 13  DLFTPHRRVLVALSGGLDSM-NLYELLYKNKERLKIHLVLAHVNHGQRPESDLEESELRT 71

Query: 57  RKKIVELMPKWKDSLGED-----HILPLAILGDISH-SSLTKNVAMKIQDNNLPNTFVPG 110
                E         G+                I      T  V     ++    TF+  
Sbjct: 72  LADRRETRIHVAHYSGDFTEAKARTFRYDFFKQIMEKEDCTALVTGHHANDQAETTFMRL 131

Query: 111 RNIIFLVFAAT 121
                L   + 
Sbjct: 132 IRGTKLRHLSG 142


>gi|319760306|ref|YP_004124244.1| sulfate adenylyltransferase subunit 2 [Candidatus Blochmannia vafer
           str. BVAF]
 gi|318039020|gb|ADV33570.1| sulfate adenylyltransferase subunit 2 [Candidatus Blochmannia vafer
           str. BVAF]
          Length = 305

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 54/178 (30%), Gaps = 9/178 (5%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVE-----TLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           ++L+S G+DSS  L  A   F          L  D G + +     R  + K     +  
Sbjct: 33  VMLYSIGKDSSVMLHLARKAFYPCSRLPFPLLHIDTGWKFRDMYIFRDNIAKSSDVDLLI 92

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP---GRNIIFLVFAATLA 123
           +K+  G    +   + G   ++S+ K  ++K   N            R+   +     + 
Sbjct: 93  YKNQEGISMGIDPFVHGSSKYTSIMKTESLKKALNKYGFDAAFGGARRDEEKIRSKERIF 152

Query: 124 YRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
                 ++     +                      L   + + V    ++ +K +  
Sbjct: 153 SFRDKFHVWNPKNQRPELWSKYNGRINSGESIRVFPLSNWTELDVWQY-IFFEKIDVV 209


>gi|309379956|emb|CBX21367.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 307

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 18/170 (10%), Positives = 42/170 (24%), Gaps = 10/170 (5%)

Query: 13  LLFSGGQDSSTCLSWALDR---FDRVE-----TLSFDYGQRNKVELECRLCVRKKIVELM 64
           LLFSGG+DS   L+ A        R        +  D G      +  R     K+   +
Sbjct: 34  LLFSGGKDSVVLLALACKAFRLGSRPVKLPFPLVHIDTGHNYPEVIAFRDAQAAKLNARL 93

Query: 65  --PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
              + +DS+ +  ++        + +     +     +          R+         +
Sbjct: 94  IVGRVEDSIAKGTVVLRKETDSRNAAQAVTLLETIEANGFDALMGGARRDEEKARAKERI 153

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
                         +                      +   + + +   +
Sbjct: 154 FSFRDEFGQWDPKAQRPELWSLYNTRLHKGENMRVFPISNWTELDIWQYI 203


>gi|261392534|emb|CAX50089.1| sulfate adenylyltransferase subunit 2 (sulfate adenylate
           transferase; SAT; ATP-sulfurylase small subunit)
           [Neisseria meningitidis 8013]
          Length = 307

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 18/170 (10%), Positives = 42/170 (24%), Gaps = 10/170 (5%)

Query: 13  LLFSGGQDSSTCLSWALDR---FDRVE-----TLSFDYGQRNKVELECRLCVRKKIVELM 64
           LLFSGG+DS   L+ A        R        +  D G      +  R     K+   +
Sbjct: 34  LLFSGGKDSVVLLALACKAFRLGSRPVKLPFPLVHIDTGHNYPEVIAFRDAQAAKLNARL 93

Query: 65  --PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
              + +DS+ +  ++        + +     +     +          R+         +
Sbjct: 94  IVGRVEDSIAKGTVVLRKETDSRNAAQAVTLLETIEANGFDALMGGARRDEEKARAKERI 153

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
                         +                      +   + + +   +
Sbjct: 154 FSFRDEFGQWDPKAQRPELWSLYNTRLHKGENMRVFPISNWTELDIWQYI 203


>gi|254804981|ref|YP_003083202.1| sulfate adenylyltransferase subunit 2 [Neisseria meningitidis
           alpha14]
 gi|254668523|emb|CBA05916.1| sulfate adenylyltransferase subunit 2 [Neisseria meningitidis
           alpha14]
 gi|325204187|gb|ADY99640.1| sulfate adenylyltransferase, small subunit [Neisseria meningitidis
           M01-240355]
          Length = 307

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 18/170 (10%), Positives = 42/170 (24%), Gaps = 10/170 (5%)

Query: 13  LLFSGGQDSSTCLSWALDR---FDRVE-----TLSFDYGQRNKVELECRLCVRKKIVELM 64
           LLFSGG+DS   L+ A        R        +  D G      +  R     K+   +
Sbjct: 34  LLFSGGKDSVVLLALACKAFRLGSRPVKLPFPLVHIDTGHNYPEVIAFRDAQAAKLNARL 93

Query: 65  --PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
              + +DS+ +  ++        + +     +     +          R+         +
Sbjct: 94  IVGRVEDSIAKGTVVLRKETDSRNAAQAVTLLETIEANGFDALMGGARRDEEKARAKERI 153

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
                         +                      +   + + +   +
Sbjct: 154 FSFRDEFGQWDPKAQRPELWSLYNTRLHKGENMRVFPISNWTELDIWQYI 203


>gi|261350840|ref|ZP_05976257.1| N-type ATP pyrophosphatase family protein [Methanobrevibacter
           smithii DSM 2374]
 gi|288860458|gb|EFC92756.1| N-type ATP pyrophosphatase family protein [Methanobrevibacter
           smithii DSM 2374]
          Length = 226

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 58/198 (29%), Gaps = 18/198 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRV-ETLS----------FDYGQRNKVELECRLCVRK 58
              +LFSGG+DS+  L  AL+  + V   LS          F     +  +L        
Sbjct: 2   KVAVLFSGGKDSTMALYNALETGEDVKYLLSMKSVNDESYMFHVPNIHITDLLAEALNIP 61

Query: 59  KIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
            I       K+   ED  +    L D+   ++       +   +          +  +  
Sbjct: 62  IITAQTQGIKEEELEDLKMAFIKLKDLGVEAIYTGALYSVYQKSRIEKLGDEVGLEIISP 121

Query: 119 AATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKY 178
              +     +  IV    E   SG                 LG +        L+ + K 
Sbjct: 122 YWHVNELEYMKEIVSLGFEVIISGVFAYG-------LDESWLGRKIDDKAIDELVEINKK 174

Query: 179 ETWKLAQDIGGQDLVNLI 196
               LA + G  + + + 
Sbjct: 175 VGINLAFEGGEAETLAVD 192


>gi|220912271|ref|YP_002487580.1| argininosuccinate synthase [Arthrobacter chlorophenolicus A6]
 gi|254807503|sp|B8HGC9|ASSY_ARTCA RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|219859149|gb|ACL39491.1| Argininosuccinate synthase [Arthrobacter chlorophenolicus A6]
          Length = 401

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 16/51 (31%), Gaps = 1/51 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
               +L +SGG D S             V  ++ D GQ  +     R   
Sbjct: 1  MTERIVLAYSGGLDTSVAIGWIGEATGAEVIAVAVDVGQGGESLETIRQRA 51


>gi|186476983|ref|YP_001858453.1| sulfate adenylyltransferase subunit 2 [Burkholderia phymatum
           STM815]
 gi|184193442|gb|ACC71407.1| Sulfate adenylyltransferase [Burkholderia phymatum STM815]
          Length = 320

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 52/195 (26%), Gaps = 19/195 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF---------DRVETLSFDYGQRNKVELE 51
           + +++ +     LLFSGG+DS   L+ AL  F              +  D G      ++
Sbjct: 34  LRELVAECSKPALLFSGGKDSVVVLALALKAFGLGANRKTQLPFPLVHIDTGHNYDEVID 93

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
            R    ++I          L   H+      G +     T +         L      G 
Sbjct: 94  FRDRRAQEIGA-------QLVVGHVEDSIKRGTVRLRRETDSRNAAQAVTLLETIEQYGY 146

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
             +                I     E         R +        ++ G    V    P
Sbjct: 147 TAMIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHQGEHLRV---FP 203

Query: 172 LMWLKKYETWKLAQD 186
           +    + + W+    
Sbjct: 204 ISNWTELDVWQYIAR 218


>gi|163753040|ref|ZP_02160164.1| hypothetical protein KAOT1_12807 [Kordia algicida OT-1]
 gi|161326772|gb|EDP98097.1| hypothetical protein KAOT1_12807 [Kordia algicida OT-1]
          Length = 301

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 53/180 (29%), Gaps = 12/180 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVR 57
            +++ +    +LLFSGG+DS T +  A   F         L  D G      +E R  + 
Sbjct: 20  REVVAQFEKPVLLFSGGKDSITLVRLAQKAFFPAKIPFPLLHIDTGHNFPETIEFRDRLV 79

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           KK+          L   ++      G +   +        +Q   L +          + 
Sbjct: 80  KKLG-------LQLIVRNVQDNIDAGKVQEETGKYASRNILQTETLLDAIEEFGFDACIG 132

Query: 118 FAATLAYRLGITN-IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
            A     +      I     +       + R +    +   IN G    V   +    L 
Sbjct: 133 GARRDEEKARAKERIFSVRDDFGQWDEKNQRPEVFDMLNGKINHGQNVRVFPISNWTELD 192


>gi|126731353|ref|ZP_01747160.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Sagittula stellata E-37]
 gi|126708264|gb|EBA07323.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Sagittula stellata E-37]
          Length = 523

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 57/183 (31%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS       +   D++  +  D+G     E        +++V++    
Sbjct: 226 KQVICALSGGVDSSVTGILLHEAIGDQLTCVFVDHGLLRLNE-------AEQVVQMFRDN 278

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +            LG +   S   +  +K +        V  +    +  A  LA    
Sbjct: 279 YNLNLIHADESDLFLGALEGVS---DPEIKRKTIGKLFIDVFQKYADQIEGAEFLAQGTL 335

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +++  V  +             ++      L  +  + +  PL  L K E   L  ++
Sbjct: 336 YPDVIESVSFSGGPSVTI------KSHHNVGGLPEKMGLKLVEPLRELFKDEVRALGHEL 389

Query: 188 GGQ 190
           G  
Sbjct: 390 GLP 392


>gi|121634892|ref|YP_975137.1| sulfate adenylyltransferase subunit 2 [Neisseria meningitidis
           FAM18]
 gi|120866598|emb|CAM10349.1| putative sulphate adenylate transferase subunit 2 [Neisseria
           meningitidis FAM18]
 gi|325132234|gb|EGC54928.1| sulfate adenylyltransferase, small subunit [Neisseria meningitidis
           M6190]
 gi|325138159|gb|EGC60730.1| sulfate adenylyltransferase, small subunit [Neisseria meningitidis
           ES14902]
          Length = 307

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 18/170 (10%), Positives = 42/170 (24%), Gaps = 10/170 (5%)

Query: 13  LLFSGGQDSSTCLSWALDR---FDRVE-----TLSFDYGQRNKVELECRLCVRKKIVELM 64
           LLFSGG+DS   L+ A        R        +  D G      +  R     K+   +
Sbjct: 34  LLFSGGKDSVVLLALACKAFRLGSRPVKLPFPLVHIDTGHNYPEVIAFRDAQAAKLNARL 93

Query: 65  --PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
              + +DS+ +  ++        + +     +     +          R+         +
Sbjct: 94  IVGRVEDSIAKGTVVLRKETDSRNAAQAVTLLETIEANGFDALMGGARRDEEKARAKERI 153

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
                         +                      +   + + +   +
Sbjct: 154 FSFRDEFGQWDPKAQRPELWSLYNTRLHKGENMRVFPISNWTELDIWQYI 203


>gi|119964149|ref|YP_947403.1| argininosuccinate synthase [Arthrobacter aurescens TC1]
 gi|166219943|sp|A1R591|ASSY_ARTAT RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|119951008|gb|ABM09919.1| argininosuccinate synthase [Arthrobacter aurescens TC1]
          Length = 401

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 16/51 (31%), Gaps = 1/51 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
               +L +SGG D S             V  ++ D GQ  +     R   
Sbjct: 1  MTERIVLAYSGGLDTSVAIGWIGEATGAEVIAVAVDVGQGGESLETIRQRA 51


>gi|78485956|ref|YP_391881.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Thiomicrospira crunogena XCL-2]
 gi|91206836|sp|Q31F66|GUAA_THICR RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|78364242|gb|ABB42207.1| GMP synthase (glutamine-hydrolyzing) [Thiomicrospira crunogena
           XCL-2]
          Length = 526

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 25/60 (41%), Gaps = 3/60 (5%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKWK 68
           +LL  SGG DSS   +       D++  +  D+G  R++   +      + +   + +  
Sbjct: 231 VLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDHGLLRHQEGDQVMSMFAENMGIKVIRVD 290


>gi|15677030|ref|NP_274182.1| sulfate adenylyltransferase subunit 2 [Neisseria meningitidis MC58]
 gi|15677066|ref|NP_274218.1| sulfate adenylyltransferase subunit 2 [Neisseria meningitidis MC58]
 gi|161870039|ref|YP_001599208.1| sulfate adenylyltransferase subunit 2 [Neisseria meningitidis
           053442]
 gi|304387544|ref|ZP_07369733.1| sulfate adenylyltransferase subunit 2 [Neisseria meningitidis ATCC
           13091]
 gi|313668301|ref|YP_004048585.1| sulphate adenylate transferase subunit 2 [Neisseria lactamica
           ST-640]
 gi|7226391|gb|AAF41540.1| sulfate adenylyltransferase, subunit 2 [Neisseria meningitidis
           MC58]
 gi|7226429|gb|AAF41575.1| sulfate adenylyltransferase, subunit 2 [Neisseria meningitidis
           MC58]
 gi|161595592|gb|ABX73252.1| sulfate adenylyltransferase, subunit 2 [Neisseria meningitidis
           053442]
 gi|254670200|emb|CBA05334.1| sulfate adenylyltransferase subunit 2 [Neisseria meningitidis
           alpha153]
 gi|254673025|emb|CBA07592.1| sulfate adenylyltransferase subunit 2 [Neisseria meningitidis
           alpha275]
 gi|304338431|gb|EFM04552.1| sulfate adenylyltransferase subunit 2 [Neisseria meningitidis ATCC
           13091]
 gi|313005763|emb|CBN87217.1| putative sulphate adenylate transferase subunit 2 [Neisseria
           lactamica 020-06]
 gi|316985045|gb|EFV63998.1| sulfate adenylyltransferase, small subunit [Neisseria meningitidis
           H44/76]
 gi|325140571|gb|EGC63092.1| sulfate adenylyltransferase, small subunit [Neisseria meningitidis
           CU385]
 gi|325200171|gb|ADY95626.1| sulfate adenylyltransferase, small subunit [Neisseria meningitidis
           H44/76]
 gi|325206025|gb|ADZ01478.1| sulfate adenylyltransferase, small subunit [Neisseria meningitidis
           M04-240196]
          Length = 307

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 18/170 (10%), Positives = 42/170 (24%), Gaps = 10/170 (5%)

Query: 13  LLFSGGQDSSTCLSWALDR---FDRVE-----TLSFDYGQRNKVELECRLCVRKKIVELM 64
           LLFSGG+DS   L+ A        R        +  D G      +  R     K+   +
Sbjct: 34  LLFSGGKDSVVLLALACKAFRLGSRPVKLPFPLVHIDTGHNYPEVIAFRDAQAAKLNARL 93

Query: 65  --PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
              + +DS+ +  ++        + +     +     +          R+         +
Sbjct: 94  IVGRVEDSIAKGTVVLRKETDSRNAAQAVTLLETIEANGFDALMGGARRDEEKARAKERI 153

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
                         +                      +   + + +   +
Sbjct: 154 FSFRDEFGQWDPKAQRPELWSLYNTRLHKGENMRVFPISNWTELDIWQYI 203


>gi|15679008|ref|NP_276125.1| hypothetical protein MTH990 [Methanothermobacter
          thermautotrophicus str. Delta H]
 gi|2622091|gb|AAB85487.1| conserved protein [Methanothermobacter thermautotrophicus str.
          Delta H]
          Length = 338

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 26/59 (44%)

Query: 15 FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
          FSGG DS+  L  A D  D V   + D G   +  +E    + ++I       + +L E
Sbjct: 23 FSGGADSTALLDMAADVADTVVAFTVDTGVMPRGFIEGASGIAREIGVEHVVLEMNLLE 81


>gi|218768207|ref|YP_002342719.1| sulfate adenylyltransferase subunit 2 [Neisseria meningitidis
           Z2491]
 gi|121052215|emb|CAM08538.1| putative sulphate adenylate transferase subunit 2 [Neisseria
           meningitidis Z2491]
 gi|319410453|emb|CBY90813.1| sulfate adenylyltransferase subunit 2 (sulfate adenylate
           transferase; SAT; ATP-sulfurylase small subunit)
           [Neisseria meningitidis WUE 2594]
 gi|325128256|gb|EGC51141.1| sulfate adenylyltransferase, small subunit [Neisseria meningitidis
           N1568]
          Length = 307

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 18/170 (10%), Positives = 42/170 (24%), Gaps = 10/170 (5%)

Query: 13  LLFSGGQDSSTCLSWALDR---FDRVE-----TLSFDYGQRNKVELECRLCVRKKIVELM 64
           LLFSGG+DS   L+ A        R        +  D G      +  R     K+   +
Sbjct: 34  LLFSGGKDSVVLLALACKAFRLGSRPVKLPFPLVHIDTGHNYPEVIAFRDAQAAKLNARL 93

Query: 65  --PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
              + +DS+ +  ++        + +     +     +          R+         +
Sbjct: 94  IVGRVEDSIAKGTVVLRKETDSRNAAQAVTLLETIEANGFDALMGGARRDEEKARAKERI 153

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
                         +                      +   + + +   +
Sbjct: 154 FSFRDEFGQWDPKAQRPELWSLYNTRLHKGENMRVFPISNWTELDIWQYI 203


>gi|116670063|ref|YP_830996.1| argininosuccinate synthase [Arthrobacter sp. FB24]
 gi|166219944|sp|A0JV26|ASSY_ARTS2 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|116610172|gb|ABK02896.1| argininosuccinate synthase [Arthrobacter sp. FB24]
          Length = 401

 Score = 41.8 bits (96), Expect = 0.083,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 16/51 (31%), Gaps = 1/51 (1%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCV 56
               +L +SGG D S             V  ++ D GQ  +     R   
Sbjct: 1  MTERIVLAYSGGLDTSVAIGWIGEATGAEVIAVAVDVGQGGESLETIRQRA 51


>gi|330816541|ref|YP_004360246.1| argininosuccinate synthase [Burkholderia gladioli BSR3]
 gi|327368934|gb|AEA60290.1| argininosuccinate synthase [Burkholderia gladioli BSR3]
          Length = 404

 Score = 41.8 bits (96), Expect = 0.084,   Method: Composition-based stats.
 Identities = 21/164 (12%), Positives = 41/164 (25%), Gaps = 2/164 (1%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL-M 64
           K    LL +SGG D+ST L +   +F  RV     + GQ+   E   +        EL +
Sbjct: 2   KPKHILLAYSGGLDTSTALHFLKQQFDCRVTAYCANLGQKEDWERMKKRAAIAGADELVI 61

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +++   D++ P                 +         T     + +  +       
Sbjct: 62  ADLRETFIRDYVFPALKANAAYERDYLLGTPLARPAIVKGLTDYALAHDVDTLSHGCTQK 121

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV 168
                   +       +                          +
Sbjct: 122 GNDQVRFEMASRILAPNLPTVAPWRMWDIASREDLFAYCQKHGI 165


>gi|319942350|ref|ZP_08016664.1| argininosuccinate synthase [Sutterella wadsworthensis 3_1_45B]
 gi|319804038|gb|EFW00946.1| argininosuccinate synthase [Sutterella wadsworthensis 3_1_45B]
          Length = 443

 Score = 41.8 bits (96), Expect = 0.084,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 21/61 (34%)

Query: 9  PSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
              + FSGG D+S  L W   +       + +  Q ++ + E       +      +  
Sbjct: 13 EKVGIAFSGGLDTSCALRWMKTKGALPYAYTANLAQPDETDYEAIPRRAMEYGAEKARLI 72

Query: 69 D 69
          D
Sbjct: 73 D 73


>gi|242309914|ref|ZP_04809069.1| sulfate adenylyltransferase [Helicobacter pullorum MIT 98-5489]
 gi|239523211|gb|EEQ63077.1| sulfate adenylyltransferase [Helicobacter pullorum MIT 98-5489]
          Length = 301

 Score = 41.8 bits (96), Expect = 0.084,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 58/184 (31%), Gaps = 4/184 (2%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVET----LSFDYGQRNKVELECRLCV 56
           M +++ +     +L+S G+DSS  L      F         +  D   + K  +E R   
Sbjct: 19  MREVVAEFEKPAMLYSIGKDSSVMLHLLQKAFYPAIPPIPLVHVDTTWKFKEMIEFRDRR 78

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
            K++   +  +++   ++  L   I G   H+ + K   +K   +      V G      
Sbjct: 79  AKELGMELIVYQNPKIQELNLSPFIHGSSMHTDIAKTQGLKQMLDIYKFDAVFGGARRDE 138

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
             +          +        +        ++       +I +   S+ T      ++ 
Sbjct: 139 EKSRAKERIYSFRDENHTWDPKNQRPELWNLYNGRHKKGESIRVFPLSNWTELDVWQYIY 198

Query: 177 KYET 180
           K   
Sbjct: 199 KENI 202


>gi|254446331|ref|ZP_05059807.1| Phosphoadenosine phosphosulfate reductase family, putative
           [Verrucomicrobiae bacterium DG1235]
 gi|198260639|gb|EDY84947.1| Phosphoadenosine phosphosulfate reductase family, putative
           [Verrucomicrobiae bacterium DG1235]
          Length = 301

 Score = 41.8 bits (96), Expect = 0.084,   Method: Composition-based stats.
 Identities = 18/168 (10%), Positives = 44/168 (26%), Gaps = 7/168 (4%)

Query: 12  LLLFSGGQDSSTCLSWALDRF----DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK- 66
           +LLFSGG+DS      A+  F         L  D G      +  R  + +K+   +   
Sbjct: 31  VLLFSGGKDSIVMTHLAMKAFWPAKIPFPLLHVDTGHNFPETIVYRDDLVEKLGANLVVG 90

Query: 67  -WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTF-VPGRNIIFLVFAATLAY 124
             ++++ +  ++         +    + +   +++           R+            
Sbjct: 91  SVEEAIADGRVVEETGANASRNMLQIQTLLDALEEGQYDAAMGGARRDEEKARAKERFFS 150

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
                       +                      L   + + V   +
Sbjct: 151 HRDEFGQWDPKNQRPELWNIFNGRMNQGEHFRVFPLSNWTEMDVWQYM 198


>gi|119509622|ref|ZP_01628769.1| asparagine synthetase [Nodularia spumigena CCY9414]
 gi|119465811|gb|EAW46701.1| asparagine synthetase [Nodularia spumigena CCY9414]
          Length = 620

 Score = 41.8 bits (96), Expect = 0.084,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 49/188 (26%), Gaps = 9/188 (4%)

Query: 15  FSGGQDSSTCLSWALDRFDRVE-TLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
            SGG DSST ++    +  +   T +  + Q    E      V + +     +   +  E
Sbjct: 251 LSGGIDSSTIVALMQAQSSQPVKTFTIGFEQTAYNEAPQAQSVAQHLGTEHTELYVTPQE 310

Query: 74  DHILP--LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI 131
              +   L  L D   S  ++     +         V                 L   +I
Sbjct: 311 TQSVIPKLPTLYDEPFSDSSQIPTFLVSQLARQQVTVSLSGDGGDELFGGYNRYLWANSI 370

Query: 132 V----IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                                 + +      ++            +   K    KLA  +
Sbjct: 371 WQRMGWISPSMRKLIALTMTSLSPKIYNNLFDILTPILPKSLQQRLPGDK--IHKLAGVL 428

Query: 188 GGQDLVNL 195
           G  + ++L
Sbjct: 429 GFDNPLDL 436


>gi|161524001|ref|YP_001579013.1| sulfate adenylyltransferase subunit 2 [Burkholderia multivorans
           ATCC 17616]
 gi|189351238|ref|YP_001946866.1| sulfate adenylyltransferase subunit 2 [Burkholderia multivorans
           ATCC 17616]
 gi|160341430|gb|ABX14516.1| sulfate adenylyltransferase, small subunit [Burkholderia
           multivorans ATCC 17616]
 gi|189335260|dbj|BAG44330.1| sulfate adenylyltransferase subunit 2 [Burkholderia multivorans
           ATCC 17616]
          Length = 320

 Score = 41.8 bits (96), Expect = 0.084,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 52/195 (26%), Gaps = 19/195 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF---------DRVETLSFDYGQRNKVELE 51
           + +++ +     LLFSGG+DS   L  AL  F              +  D G   +  ++
Sbjct: 34  LRELVAECSKPALLFSGGKDSVVVLHLALKAFGLGANRKTTLPFPLVHIDTGHNYEEVID 93

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
            R    K+I          L   H+      G +     T +         L      G 
Sbjct: 94  FRDRRAKEIGA-------ELIVGHVEDSIKRGTVVLRRETDSRNAAQAVTLLETIDAHGF 146

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
             +                I     E         R +        ++ G    V    P
Sbjct: 147 TAMIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHKGEHLRV---FP 203

Query: 172 LMWLKKYETWKLAQD 186
           +    + + W+    
Sbjct: 204 ISNWTELDVWQYIAR 218


>gi|325182700|emb|CCA17154.1| asparagine synthetase domaincontaining protein putat [Albugo
           laibachii Nc14]
          Length = 717

 Score = 41.8 bits (96), Expect = 0.085,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 63/238 (26%), Gaps = 33/238 (13%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFD-------RVETLSFDYGQRNKVELECRLCVR 57
           I       +LFSGG DS      AL ++         +  + FD       +        
Sbjct: 297 ISSKVRVAILFSGGLDSVVLA--ALTQYHVPDFEPIELLNVCFDPIGFQSPDRLAARIAT 354

Query: 58  KKIVELMPKWKDSLGEDHILPLAIL-GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
           +++  L P  +  L E +IL   +L        L K     +  N     +   R I   
Sbjct: 355 QELRTLFPTREWRLIEINILYEEVLDHQQRIHRLMKPCDTHMDFNIGAALYFLARGIGQW 414

Query: 117 VFAATLAYRLGIT-----------NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESH 165
                +   LG             ++ +       S          +     +       
Sbjct: 415 NALNEVEPALGAHSPTSTRSESTRSVCLFPDYKSDSVKCPVTGCGRKWKTGCLFTVCRVC 474

Query: 166 VTVHTPLMWLKKYETWKLA-----QDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGC 218
                  + L   +  K A      ++G  +     L  ++T   G        G  C
Sbjct: 475 CFRIQKSLRLCSPDDVKFATKEKFAEMGICERDIQALMSTYTSSEGD-------GLHC 525


>gi|255036457|ref|YP_003087078.1| GMP synthase [Dyadobacter fermentans DSM 18053]
 gi|254949213|gb|ACT93913.1| GMP synthase, large subunit [Dyadobacter fermentans DSM 18053]
          Length = 509

 Score = 41.8 bits (96), Expect = 0.085,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 13/37 (35%), Gaps = 1/37 (2%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG 43
               ++  SGG DS+   +         +  +  D G
Sbjct: 213 NDKVVMALSGGVDSTVAATLVHHAIGQNLYCIFVDNG 249


>gi|193212019|ref|YP_001997972.1| tRNA-specific 2-thiouridylase MnmA [Chlorobaculum parvum NCIB
          8327]
 gi|193085496|gb|ACF10772.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
          [Chlorobaculum parvum NCIB 8327]
          Length = 364

 Score = 41.8 bits (96), Expect = 0.085,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 15/37 (40%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFD 41
          +      ++  SGG DS+      + +  RV  L+  
Sbjct: 1  MHAKQHVIIGLSGGVDSAAAACLLIKQGYRVTGLNIR 37


>gi|325266958|ref|ZP_08133629.1| NAD+ synthetase [Kingella denitrificans ATCC 33394]
 gi|324981699|gb|EGC17340.1| NAD+ synthetase [Kingella denitrificans ATCC 33394]
          Length = 266

 Score = 41.8 bits (96), Expect = 0.085,   Method: Composition-based stats.
 Identities = 13/108 (12%), Positives = 32/108 (29%), Gaps = 6/108 (5%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++  SGG DS+   +        V  L+    Q+     +      + I  L  ++ +  
Sbjct: 29  VVGVSGGIDSAVVSTLCARTGLDVLCLNMPIRQK----PDQFDRAAEHIYHLRRQYAN-- 82

Query: 72  GEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFA 119
                + L    +    S+    ++    +           +  L + 
Sbjct: 83  VRAQTVDLTPTFEQFERSVGGKSSLHPTQDLAFANTRARLRMTTLYYY 130


>gi|262306021|gb|ACY45603.1| gln amidotransferase [Nymphon unguiculatum-charcoti complex sp.
           SEM-1997]
          Length = 202

 Score = 41.8 bits (96), Expect = 0.085,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 21/68 (30%), Gaps = 7/68 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF-------DRVETLSFDYGQRNKVELECRLCVRKKI 60
               L+  SGG DS+ C +             D++  +  D G   K E +        +
Sbjct: 43  KSKVLVFISGGVDSAVCAALIKKSILCDKESLDQMIAVHIDNGFMRKSESKQVEESLHNL 102

Query: 61  VELMPKWK 68
              +    
Sbjct: 103 GIRLIVIS 110


>gi|261880480|ref|ZP_06006907.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
          [Prevotella bergensis DSM 17361]
 gi|270332819|gb|EFA43605.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
          [Prevotella bergensis DSM 17361]
          Length = 455

 Score = 41.8 bits (96), Expect = 0.085,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 24/59 (40%), Gaps = 3/59 (5%)

Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR---NKVELECRLCVRKKIVELMPKW 67
          L+  SGG DS   L         +E +  ++  R   +  + +  + + +K+   + + 
Sbjct: 24 LVALSGGADSVALLCVLKRLGYHIEAVHCNFHLRGKESMRDEDFCVALCEKMNMTLHRI 82


>gi|126348225|emb|CAJ89946.1| putative argininosuccinate synthase [Streptomyces ambofaciens
          ATCC 23877]
          Length = 481

 Score = 41.8 bits (96), Expect = 0.085,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 26/57 (45%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  ++W  D+     T + D GQ ++ ++       K     + +  D
Sbjct: 16 IAFSGGLDTSVAVAWMRDKGAVPCTYTADIGQYDEPDIASVPDRAKTYGAEIARLVD 72


>gi|76580593|gb|ABA50068.1| sulfate adenylyltransferase, subunit 2 [Burkholderia pseudomallei
           1710b]
          Length = 639

 Score = 41.8 bits (96), Expect = 0.085,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 51/195 (26%), Gaps = 19/195 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF---------DRVETLSFDYGQRNKVELE 51
           + +++ +     LLFSGG+DS   L  AL  F              +  D G      ++
Sbjct: 353 LRELVAECSKPALLFSGGKDSVVVLHLALKAFGLGANRRTTLPFPLVHIDTGHNYDEVID 412

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
            R    K+I          L   H+      G +     T +         L      G 
Sbjct: 413 FRDRRAKQIGA-------ELVVGHVEDSIARGTVVLRRETDSRNAAQAVTLLETIERHGY 465

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
             +                I     E         R +        ++ G    V    P
Sbjct: 466 TAMIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHRGEHLRV---FP 522

Query: 172 LMWLKKYETWKLAQD 186
           +    + + W+    
Sbjct: 523 ISNWTELDVWQYIAR 537


>gi|71065801|ref|YP_264528.1| tRNA-specific 2-thiouridylase MnmA [Psychrobacter arcticus 273-4]
 gi|123648512|sp|Q4FSB4|MNMA_PSYA2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|71038786|gb|AAZ19094.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Psychrobacter arcticus 273-4]
          Length = 408

 Score = 41.8 bits (96), Expect = 0.085,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 42/162 (25%), Gaps = 5/162 (3%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
               ++  SGG DSS            VE L     + +     C       + +     
Sbjct: 32  TKHVIVGMSGGVDSSVSAVLLQQAGFVVEGLFMKNWEEDDGTEYC--TAMDDLADAQAVC 89

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                + H    A         + ++   + +    PN  +     I        A  LG
Sbjct: 90  DKIGIKLHT---ANFAMEYWDRVFEHFLAEYKAGRTPNPDILCNKEIKFKAFLDYALTLG 146

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVH 169
              I  G        Y +     +  +   ++   +    +H
Sbjct: 147 ADYIATGHYTRRSVNYKNNDGIEVAQLLRGLDNNKDQSYFLH 188


>gi|167037943|ref|YP_001665521.1| ExsB family protein [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|256751779|ref|ZP_05492652.1| PP-loop domain protein [Thermoanaerobacter ethanolicus CCSD1]
 gi|320116360|ref|YP_004186519.1| PP-loop domain-containing protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166856777|gb|ABY95185.1| ExsB family protein [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|256749307|gb|EEU62338.1| PP-loop domain protein [Thermoanaerobacter ethanolicus CCSD1]
 gi|319929451|gb|ADV80136.1| PP-loop domain protein [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 286

 Score = 41.8 bits (96), Expect = 0.085,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 46/151 (30%), Gaps = 27/151 (17%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCL---SWALDRFDRVETLSFDYGQRNKVELECRLCVR 57
           + + + K  +AL+ FSGG DS+         L   +RV  ++       K EL+  + + 
Sbjct: 20  LQEYLLKLDNALIAFSGGVDSTFLAKVSYDVL--GNRVLAVTATSPMHPKSELKEAVELA 77

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           KKI               ++               ++    +    P             
Sbjct: 78  KKIG----------IPHLVVEFN------------DILEIEEFRKNPLNRCYICKSNLFS 115

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRH 148
               +A   G   I+ G    D S +   R 
Sbjct: 116 RFKAIAEEKGFKYILEGTNADDVSDFRPGRR 146


>gi|330508428|ref|YP_004384856.1| hypothetical protein MCON_2623 [Methanosaeta concilii GP-6]
 gi|328929236|gb|AEB69038.1| conserved hypothetical protein [Methanosaeta concilii GP-6]
          Length = 218

 Score = 41.8 bits (96), Expect = 0.086,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
             +LFSGG+DSS         F+ +E ++F +G  +           +++ 
Sbjct: 2  KVAVLFSGGKDSSLTALLLEPFFEEIELVNFSFG--HDDSWMRAKEAARELG 51


>gi|317502958|ref|ZP_07961048.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
          [Prevotella salivae DSM 15606]
 gi|315665924|gb|EFV05501.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
          [Prevotella salivae DSM 15606]
          Length = 448

 Score = 41.8 bits (96), Expect = 0.086,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 30/82 (36%), Gaps = 7/82 (8%)

Query: 2  NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR---NKVELECRLCVRK 58
          N +++   + LL  SGG DS   L   ++    V  +  ++  R   +K +      + +
Sbjct: 16 NQLLQPESTYLLALSGGCDSVALLRIMIELNYHVAAVHCNFQLRNAESKRDEMFCEELCR 75

Query: 59 KIVELMPKW----KDSLGEDHI 76
           +     +     K      H+
Sbjct: 76 SLKVPFHRVYFDTKAYASLHHV 97


>gi|308234530|ref|ZP_07665267.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Atopobium vaginae DSM 15829]
          Length = 410

 Score = 41.8 bits (96), Expect = 0.086,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 41/143 (28%), Gaps = 5/143 (3%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DS+   +   +    V+ +      R+    +C       + +   +    LG  
Sbjct: 56  MSGGVDSALSAALLQEWGYDVKAIYMRNWSRDLPGFKC--TWADDLAD-AERLAVKLGLT 112

Query: 75  HILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIG 134
             +           ++   +    Q    PN  V     +     AT A+  G   I  G
Sbjct: 113 LEVW--DCEKEYKETVVDYLINAYQHGFTPNPDVMCNQTVKFGTFATRAFEHGADFIATG 170

Query: 135 VCETDYSGYPDCRHDTIRAIETA 157
                Y+      H    A E  
Sbjct: 171 HYARVYTDRHSHVHLLRAADEHK 193


>gi|288559656|ref|YP_003423142.1| tRNA methyltransferase subunit [Methanobrevibacter ruminantium
          M1]
 gi|288542366|gb|ADC46250.1| tRNA methyltransferase subunit [Methanobrevibacter ruminantium
          M1]
          Length = 193

 Score = 41.8 bits (96), Expect = 0.086,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
           A +L+SGG+DSS            VE ++ ++G
Sbjct: 2  KACVLYSGGKDSSLMGYILNQLGFDVELVTANFG 35


>gi|332521583|ref|ZP_08398036.1| asparagine synthase (glutamine-hydrolyzing) [Lacinutrix algicola
           5H-3-7-4]
 gi|332042672|gb|EGI78872.1| asparagine synthase (glutamine-hydrolyzing) [Lacinutrix algicola
           5H-3-7-4]
          Length = 557

 Score = 41.8 bits (96), Expect = 0.087,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 56/205 (27%), Gaps = 32/205 (15%)

Query: 2   NDIIKKAPSAL---------------LLFSGGQDSSTCLSWALDR--------------F 32
           +D IKK   AL               +L SGG DSS   + A                 +
Sbjct: 206 SDSIKKVKDALEAAVHRQLMSDVPYGVLLSGGLDSSVTSAIAKKYAQKRIESDDQSDAWY 265

Query: 33  DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTK 92
            ++   SF  G     +L     V   I  +  + K ++ E       ++ +I    +T 
Sbjct: 266 PQLH--SFSVGLEGSPDLAAAQKVADHIGTVHHEIKFTIQEGLDAIKDVIYNIETYDITT 323

Query: 93  NVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIR 152
            +        +          + L          G           ++      + D + 
Sbjct: 324 -IRSSTPMYLMARVIKSMGIKMVLSGEGADEIFGGYLYFHKAPNAKEFHEETVRKLDKLH 382

Query: 153 AIETAINLGMESHVTVHTPLMWLKK 177
             +        +   +   + +L K
Sbjct: 383 MYDCLRANKSLAAWGIEGRVPFLDK 407


>gi|332159445|ref|YP_004424724.1| asparagine synthetase, putative [Pyrococcus sp. NA2]
 gi|331034908|gb|AEC52720.1| asparagine synthetase, putative [Pyrococcus sp. NA2]
          Length = 475

 Score = 41.8 bits (96), Expect = 0.087,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 3/57 (5%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           I+      +LFSGG DSS     A +    V   S   G  +  ++E    V  ++ 
Sbjct: 234 IRANKKVGVLFSGGLDSSLIAKIASEYSKVVLYTS---GTEDSKDIEWARKVADELG 287


>gi|322703533|gb|EFY95140.1| argininosuccinate synthase [Metarhizium anisopliae ARSEF 23]
          Length = 371

 Score = 41.8 bits (96), Expect = 0.087,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 30/74 (40%), Gaps = 4/74 (5%)

Query: 7  KAPSALLL-FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +   + L +SGG D+ST L W L +  +V     D GQ    E    +  +   +    
Sbjct: 1  MSKGRVCLAYSGGLDTSTILVWLLQQGYQVVCYLGDVGQD---EDFAAVEAKALKLGAEA 57

Query: 66 KWKDSLGEDHILPL 79
             ++L  + +  +
Sbjct: 58 FVCENLQRELVDDV 71


>gi|323143836|ref|ZP_08078503.1| argininosuccinate synthase [Succinatimonas hippei YIT 12066]
 gi|322416428|gb|EFY07095.1| argininosuccinate synthase [Succinatimonas hippei YIT 12066]
          Length = 409

 Score = 41.8 bits (96), Expect = 0.087,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 41/158 (25%), Gaps = 13/158 (8%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
           K+    +L +SGG D+ST + W  +     V     D GQ            R+ +  + 
Sbjct: 7   KQYKKVVLAYSGGLDTSTIVPWLKENYGCEVVCFVADVGQE-----------REDLDGIE 55

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            K K S     I+       +            I + +        R  +        A 
Sbjct: 56  DKAKASGATKCIVKDLREEFVRDYVYETFKTGAIYEGDYMLGTAIAR-PVIAKAMVACAL 114

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM 162
             G   I  G                  A +  +    
Sbjct: 115 EEGADAIAHGATGKGNDQVRFESAVAALAPQLDVIAPW 152


>gi|310831050|ref|YP_003969693.1| putative 3'-5' exonuclease/tRNA(Ile) lysidine synthetase [Cafeteria
           roenbergensis virus BV-PW1]
 gi|309386234|gb|ADO67094.1| putative 3'-5' exonuclease/tRNA(Ile) lysidine synthetase [Cafeteria
           roenbergensis virus BV-PW1]
          Length = 385

 Score = 41.8 bits (96), Expect = 0.087,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 4/57 (7%)

Query: 12  LLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           ++  SGG DS   L+  L+    +R+ T S +Y QR++   E       K V L   
Sbjct: 77  IVSLSGGVDSMVLLALLLNIIPANRIITASINYNQRDESHDEM--EFLHKYVSLYRI 131


>gi|261400222|ref|ZP_05986347.1| sulfate adenylyltransferase, small subunit [Neisseria lactamica
           ATCC 23970]
 gi|269210018|gb|EEZ76473.1| sulfate adenylyltransferase, small subunit [Neisseria lactamica
           ATCC 23970]
          Length = 307

 Score = 41.8 bits (96), Expect = 0.087,   Method: Composition-based stats.
 Identities = 18/170 (10%), Positives = 42/170 (24%), Gaps = 10/170 (5%)

Query: 13  LLFSGGQDSSTCLSWALDR---FDRVE-----TLSFDYGQRNKVELECRLCVRKKIVELM 64
           LLFSGG+DS   L+ A        R        +  D G      +  R     K+   +
Sbjct: 34  LLFSGGKDSVVLLALACKAFRLGSRPVKLPFPLVHIDTGHNYPEVIAFRDAQAAKLNARL 93

Query: 65  --PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
              + +DS+ +  ++        + +     +     +          R+         +
Sbjct: 94  IVGRVEDSIAKGTVVLRKETDSRNAAQAVTLLETIEANGFDALMGGARRDEEKARAKERI 153

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPL 172
                         +                      +   + + +   +
Sbjct: 154 FSFRDEFGQWDPKAQRPELWSLYNTKLHKGENMRVFPISNWTELDIWQYI 203


>gi|224539103|ref|ZP_03679642.1| hypothetical protein BACCELL_04004 [Bacteroides cellulosilyticus
          DSM 14838]
 gi|224519267|gb|EEF88372.1| hypothetical protein BACCELL_04004 [Bacteroides cellulosilyticus
          DSM 14838]
          Length = 436

 Score = 41.8 bits (96), Expect = 0.087,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 15/43 (34%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR 45
           +  +    L+  SGG DS   L   L      E    ++  R
Sbjct: 14 KLFTREDKILVTLSGGADSVALLRLLLAMGYTCEAAHCNFHLR 56


>gi|192360356|ref|YP_001982568.1| GMP synthase [Cellvibrio japonicus Ueda107]
 gi|226738415|sp|B3PIG3|GUAA_CELJU RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|190686521|gb|ACE84199.1| GMP synthase, C- domain protein [Cellvibrio japonicus Ueda107]
          Length = 525

 Score = 41.8 bits (96), Expect = 0.087,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 51/185 (27%), Gaps = 19/185 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMP 65
               LL  SGG DSS   +       D++  +  D G  R     +      K +   + 
Sbjct: 227 TDKVLLGLSGGVDSSVVAALLHRAIGDQLTCVFVDNGLLRKNEGDQVMDMFAKNMGVRVI 286

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           +          L L  L  +S     + +      +         + + +L         
Sbjct: 287 RADAEQ-----LFLGKLAGVSDPEKKRKIIGGTFIDVFDTEATKLQEVKWLAQGTIY--- 338

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                        + +     +   I++      L  +    +  PL  L K E   +  
Sbjct: 339 ---------PDVIESAAAKTGKAHVIKSHHNVGGLPEDMAFKLVEPLRELFKDEVRAIGL 389

Query: 186 DIGGQ 190
           ++G  
Sbjct: 390 ELGLP 394


>gi|163797472|ref|ZP_02191423.1| GMP synthase (glutamine-hydrolyzing) [alpha proteobacterium BAL199]
 gi|159177221|gb|EDP61780.1| GMP synthase (glutamine-hydrolyzing) [alpha proteobacterium BAL199]
          Length = 515

 Score = 41.8 bits (96), Expect = 0.087,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 54/187 (28%), Gaps = 17/187 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DSS       +   D++  +  D+G     E      V +   +    
Sbjct: 217 SGRVICGLSGGVDSSVAAVLIHEAIGDQLTCVFVDHGLLRAGE---ADDVVRMFRDHYNI 273

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     L      ++    L      +++   +   F+                  
Sbjct: 274 P---------LIARDASELFLGELEGVDDPELKRKTIGRLFIDVFQQEADKIKDARFLAQ 324

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G           +   +      TI++      L    ++ +  PL  L K E  +L  +
Sbjct: 325 GTLY----PDVIESVSFTGGPSVTIKSHHNVGGLPERMNLKLVEPLRELFKDEVRELGCE 380

Query: 187 IGGQDLV 193
           +G  +++
Sbjct: 381 LGLPEIL 387


>gi|326571721|gb|EGE21734.1| GMP synthase [Moraxella catarrhalis BC8]
 gi|326574365|gb|EGE24308.1| GMP synthase [Moraxella catarrhalis CO72]
          Length = 519

 Score = 41.8 bits (96), Expect = 0.088,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 51/189 (26%), Gaps = 17/189 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS   +       D++  +  D G     E +    V +   E M  
Sbjct: 221 NQKVLLGLSGGVDSSVVAALLHRAIGDQLTCVFVDNGLLRLNEGD---QVMQMFAENMGI 277

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                  +     A+ G     +  K +  +  +                          
Sbjct: 278 RVIRADSEARFLNALAGVSDPEAKRKIIGREFIEVFSEEARKLDGVKFLAQGT------- 330

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                 I     + +     +   I++      L  +    +  PL+ L K E  KL   
Sbjct: 331 ------IYPDVIESAASKQGKAHVIKSHHNVGGLPDDLAFELVEPLLDLFKDEVRKLGVA 384

Query: 187 IGGQDLVNL 195
           +G    +  
Sbjct: 385 LGIPHHMIY 393


>gi|326563088|gb|EGE13361.1| GMP synthase [Moraxella catarrhalis 12P80B1]
          Length = 519

 Score = 41.8 bits (96), Expect = 0.088,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 51/189 (26%), Gaps = 17/189 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS   +       D++  +  D G     E +    V +   E M  
Sbjct: 221 NQKVLLGLSGGVDSSVVAALLHRAIGDQLTCVFVDNGLLRLNEGD---QVMQMFAENMGI 277

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                  +     A+ G     +  K +  +  +                          
Sbjct: 278 RVIRADSEARFLNALAGVSDPEAKRKIIGREFIEVFSEEARKLDGVKFLAQGT------- 330

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                 I     + +     +   I++      L  +    +  PL+ L K E  KL   
Sbjct: 331 ------IYPDVIESAASKQGKAHVIKSHHNVGGLPDDLAFELVEPLLDLFKDEVRKLGVA 384

Query: 187 IGGQDLVNL 195
           +G    +  
Sbjct: 385 LGIPHHMIY 393


>gi|302870926|ref|YP_003839562.1| NAD+ synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302573785|gb|ADL41576.1| NAD+ synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 540

 Score = 41.8 bits (96), Expect = 0.088,   Method: Composition-based stats.
 Identities = 17/147 (11%), Positives = 37/147 (25%), Gaps = 2/147 (1%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVEL--ECRLCVRKKIVELMP 65
              A++  SGG DSS     A +   +   L      R   E   +    + + +     
Sbjct: 285 TKKAVVGLSGGIDSSVVCCLATEALGKENVLGVAMPSRYSSEHSLKDAKQLAENLGIEFR 344

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            +         L +    +++   L +         N+        N + L         
Sbjct: 345 VYSIEEPFKSYLKMFNGSEVALQDLAEENIQARIRGNILMFISNRENRLVLTTGNKSELA 404

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIR 152
           +G   +   +           +     
Sbjct: 405 VGYCTLYGDMAGGLAVISDLPKMLVYE 431


>gi|255571524|ref|XP_002526709.1| asparagine synthetase, putative [Ricinus communis]
 gi|223533948|gb|EEF35671.1| asparagine synthetase, putative [Ricinus communis]
          Length = 591

 Score = 41.8 bits (96), Expect = 0.088,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 54/194 (27%), Gaps = 14/194 (7%)

Query: 13  LLFSGGQDSSTCLSW----------ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +L SGG DSS   S           A     ++   SF  G     +L+    V   +  
Sbjct: 230 VLLSGGLDSSLVASITARHLADTKAAKQWGAQLH--SFCVGLEGSPDLKAAKEVADYLGT 287

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +  ++     +D I  +  +     +     +        +          + +    + 
Sbjct: 288 VHHEF-HFTVQDGIDAIEDVIYHIETYDVTTIRASTPMFLMARKIKALGVKMVISGEGSD 346

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
               G         + ++      +   +   +        S   +   + +L K E   
Sbjct: 347 EIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKATSAWGLEARIPFLDK-EFIN 405

Query: 183 LAQDIGGQDLVNLI 196
           +A  IG +  +   
Sbjct: 406 VAMAIGPESKMIKP 419


>gi|218288869|ref|ZP_03493120.1| NAD+ synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218240958|gb|EED08135.1| NAD+ synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 283

 Score = 41.8 bits (96), Expect = 0.088,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 25/73 (34%), Gaps = 12/73 (16%)

Query: 10 SALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           A+   SGG DS+     A +    DRV  +   Y   +   LE  L V + +       
Sbjct: 35 KAVFGLSGGIDSALTAFLAAEALGRDRVHAVLMPYRTSSPKSLEDALKVVEALG------ 88

Query: 68 KDSLGEDHILPLA 80
                  ++ + 
Sbjct: 89 ----IPHTVIDIT 97


>gi|119612005|gb|EAW91599.1| hCG1741694, isoform CRA_b [Homo sapiens]
          Length = 158

 Score = 41.8 bits (96), Expect = 0.088,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
          +    S +L  SGG D+S  L W  ++   V     + GQ+   E +       K+  
Sbjct: 1  MSSKGSMVLAHSGGLDTSCMLVWLKEQGHVVIAYLANIGQKEDFEKD--RKKACKLGA 56


>gi|115489234|ref|NP_001067104.1| Os12g0574900 [Oryza sativa Japonica Group]
 gi|113649611|dbj|BAF30123.1| Os12g0574900 [Oryza sativa Japonica Group]
          Length = 466

 Score = 41.8 bits (96), Expect = 0.088,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 39/125 (31%), Gaps = 7/125 (5%)

Query: 13  LLFSGGQDSSTCLSWA-----LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           +LFSGG DS    +             +  +SFD GQ     +   L   K++  + P  
Sbjct: 187 ILFSGGLDSMILAALLDQCLDSKWTIDLLNVSFD-GQLAPDRI-SALAGLKELQRISPIR 244

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +  L E   +   + G+  H       +    D N+             V  +    + G
Sbjct: 245 RWRLVEIDTVLTNLKGESEHVMSLIYPSNTYMDLNIGIALWLAAGGDGWVDGSICNMQDG 304

Query: 128 ITNIV 132
                
Sbjct: 305 CRYKY 309


>gi|33519975|ref|NP_878807.1| GMP synthase [Candidatus Blochmannia floridanus]
 gi|44887941|sp|Q7VRS2|GUAA_BLOFL RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|33504321|emb|CAD83213.1| GMP synthase (glutamine-hydrolyzing) [Candidatus Blochmannia
           floridanus]
          Length = 526

 Score = 41.8 bits (96), Expect = 0.088,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 55/188 (29%), Gaps = 19/188 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALD--RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               +L FSGG DS             ++   +  + G     E+       KK  +L  
Sbjct: 228 QDRVVLAFSGGIDSLVTALLLKYAINHEQFVCVFVNNGLLCCNEINRISNFCKKYQDLNI 287

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                L E+    L+ L  +      + +  KI            +NI +L      +  
Sbjct: 288 I---HLSEEKRF-LSALTGVIDPEEKRKIIGKIFVEIFQAQISQLKNIKWLAQGTIYSDV 343

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           +              SG      + I++           ++ +  P+  L K E   +  
Sbjct: 344 IE-------------SGMSCASANIIKSHHNVGGFPSSVNIQLLEPIKDLFKDEVRNIGL 390

Query: 186 DIGGQDLV 193
            +G    V
Sbjct: 391 YLGLPLNV 398


>gi|317047001|ref|YP_004114649.1| tRNA(Ile)-lysidine synthetase [Pantoea sp. At-9b]
 gi|316948618|gb|ADU68093.1| tRNA(Ile)-lysidine synthetase [Pantoea sp. At-9b]
          Length = 433

 Score = 41.8 bits (96), Expect = 0.088,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 20/61 (32%), Gaps = 5/61 (8%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWA-----LDRFDRVETLSFDYGQRNKVELECRLC 55
          +  ++      +L FSGG DS+  L             ++  L   +G     +     C
Sbjct: 6  LAALLTPDARCVLAFSGGLDSTVLLHQLVCWRQQHPQMQLRALHVHHGLSPNADSWAAHC 65

Query: 56 V 56
           
Sbjct: 66 Q 66


>gi|225010580|ref|ZP_03701051.1| asparagine synthase (glutamine-hydrolyzing) [Flavobacteria
           bacterium MS024-3C]
 gi|225005409|gb|EEG43360.1| asparagine synthase (glutamine-hydrolyzing) [Flavobacteria
           bacterium MS024-3C]
          Length = 556

 Score = 41.8 bits (96), Expect = 0.088,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 55/194 (28%), Gaps = 14/194 (7%)

Query: 13  LLFSGGQDSSTCLSWALDR-------FDRVET----LS-FDYGQRNKVELECRLCVRKKI 60
           +L SGG DSS   + A           D  +     L  F  G     +L     V   I
Sbjct: 232 VLLSGGLDSSVTSAIAKKYAQKRIESGDTTDAWWPQLHSFSVGLEGSPDLAAARKVADHI 291

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  + K ++ E       ++ ++    +T  +        +          + L    
Sbjct: 292 GTVHHEIKFTIQEGLDAIKDVIYNLETYDITT-IRASTPMYLMARVIKSMGIKMVLSGEG 350

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
                 G           D+      + D +   +        +   +   + +L K E 
Sbjct: 351 ADELFGGYLYFHKAPSAKDFHEETVRKLDKLHMYDCLRANKSLAAWGIEGRVPFLDK-EF 409

Query: 181 WKLAQDIGGQDLVN 194
             +A  I  +D + 
Sbjct: 410 MDVAMRINPKDKMI 423


>gi|225075259|ref|ZP_03718458.1| hypothetical protein NEIFLAOT_00262 [Neisseria flavescens
          NRL30031/H210]
 gi|224953434|gb|EEG34643.1| hypothetical protein NEIFLAOT_00262 [Neisseria flavescens
          NRL30031/H210]
          Length = 441

 Score = 41.8 bits (96), Expect = 0.088,   Method: Composition-based stats.
 Identities = 8/63 (12%), Positives = 20/63 (31%), Gaps = 6/63 (9%)

Query: 15 FSGGQDSSTCLSWALD----RFDRVETLSFDYG--QRNKVELECRLCVRKKIVELMPKWK 68
           SGG DS   L         R+  +  +   +G         +      +++   +   +
Sbjct: 30 LSGGLDSVVLLHLLHRMREFRYFDLRAVHVHHGLSTNADSWAKFCQDYCQRLNVALRVCR 89

Query: 69 DSL 71
           ++
Sbjct: 90 VNV 92


>gi|126662003|ref|ZP_01733002.1| asparagine synthetase B [Flavobacteria bacterium BAL38]
 gi|126625382|gb|EAZ96071.1| asparagine synthetase B [Flavobacteria bacterium BAL38]
          Length = 538

 Score = 41.8 bits (96), Expect = 0.088,   Method: Composition-based stats.
 Identities = 25/202 (12%), Positives = 43/202 (21%), Gaps = 14/202 (6%)

Query: 13  LLFSGGQDSSTCLSWALD----RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           +L SGG DSS   S            +   SF  G                 +       
Sbjct: 224 VLLSGGLDSSLIASITSRLLEGTGQELH--SFSIGLDASAPDLVAAKKVADFIGTTHHEI 281

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
               E  I  L  L     +    ++        L          + L          G 
Sbjct: 282 HFTVEQGIEILDQLIWHLETYDVTSIRASTPMYFLSKAITDKGIKMVLSGEGADEIFGGY 341

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                     D+      R   +   +            +   + +L K        D+ 
Sbjct: 342 LYFRNAPSVLDFQKETIERVQKLFTADLLRADKSTMAHGLEARVPFLDKA-----FLDLA 396

Query: 189 GQDLVNLILEESHTCYLGKRDK 210
            +      + ++   Y G    
Sbjct: 397 IKIQPEEKMPKT---YNGIEKY 415


>gi|71907956|ref|YP_285543.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Dechloromonas aromatica RCB]
 gi|91206803|sp|Q47DK8|GUAA_DECAR RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|71847577|gb|AAZ47073.1| GMP synthase (glutamine-hydrolyzing) [Dechloromonas aromatica RCB]
          Length = 544

 Score = 41.8 bits (96), Expect = 0.088,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 20/182 (10%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKWK 68
           ++L  SGG DSS   +       D++  +  D+G  R            + +   + +  
Sbjct: 230 VILGLSGGVDSSVAAALIHKAIGDQLTCVFVDHGLLRLNEGDMVMEMFARNLGVKVIRVD 289

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                        +G ++  S  +     I    +    V              A  L  
Sbjct: 290 A--------VDDFMGKLAGVSDPEQKRKIIGKEFVEVFQVE-------SKKLAAAKWLAQ 334

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             I   V E+   G       TI++      L  + H+ +  PL  L K E  +L   +G
Sbjct: 335 GTIYPDVIESAGKGKK--GAHTIKSHHNVGGLPEDMHLKLLEPLRELFKDEVRELGIALG 392

Query: 189 GQ 190
             
Sbjct: 393 LP 394


>gi|216988|dbj|BAA00691.1| argininosuccinate synthetase [Streptomyces coelicolor A3(2)]
          Length = 487

 Score = 41.8 bits (96), Expect = 0.088,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 26/57 (45%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  ++W  D+     T + D GQ ++ ++       K     + +  D
Sbjct: 22 IAFSGGLDTSVAVAWMRDKGAVPCTYTADIGQYDEPDIASVPDRAKTYGAEVARLVD 78


>gi|21225319|ref|NP_631098.1| argininosuccinate synthase [Streptomyces coelicolor A3(2)]
 gi|256783660|ref|ZP_05522091.1| argininosuccinate synthase [Streptomyces lividans TK24]
 gi|289767544|ref|ZP_06526922.1| argininosuccinate synthase [Streptomyces lividans TK24]
 gi|19857463|sp|P24532|ASSY_STRCO RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|9716143|emb|CAC01534.1| argininosuccinate synthase [Streptomyces coelicolor A3(2)]
 gi|289697743|gb|EFD65172.1| argininosuccinate synthase [Streptomyces lividans TK24]
          Length = 481

 Score = 41.8 bits (96), Expect = 0.088,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 26/57 (45%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  ++W  D+     T + D GQ ++ ++       K     + +  D
Sbjct: 16 IAFSGGLDTSVAVAWMRDKGAVPCTYTADIGQYDEPDIASVPDRAKTYGAEVARLVD 72


>gi|313617895|gb|EFR90082.1| argininosuccinate synthase [Listeria innocua FSL S4-378]
          Length = 407

 Score = 41.8 bits (96), Expect = 0.089,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYG 43
          M  + K     +L +SGG D+S  + W ++    V     D G
Sbjct: 1  MFTMTK--EKIVLAYSGGLDTSVAIQWLVESGYEVIACCLDVG 41


>gi|290476585|ref|YP_003469490.1| ATP-sulfurylase subunit 2 [Xenorhabdus bovienii SS-2004]
 gi|289175923|emb|CBJ82726.1| ATP-sulfurylase, subunit 2 (ATP:sulfate adenylyltransferase)
           [Xenorhabdus bovienii SS-2004]
          Length = 302

 Score = 41.8 bits (96), Expect = 0.089,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 55/177 (31%), Gaps = 15/177 (8%)

Query: 12  LLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++L+S G+DSS  L  A   F         L  D G + +   + R    +K    +  +
Sbjct: 31  VMLYSIGKDSSVMLHLARKAFYPGKLPFSLLHVDTGWKFREMYDFRDHTAEKYGFELLVY 90

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           ++  GE   +   I G   H+         ++   L       R       A     +  
Sbjct: 91  RNPQGEALGINPFIHGSAKHTD-------IMKTEGLKQALDKYRFDAAFGGARRDEEKSR 143

Query: 128 ITN-IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
               I      +      + R +  R     IN G    V    PL    + + W+ 
Sbjct: 144 AKERIYSFRDRSHRWDPKNQRPELWRNYNGQINKGESIRV---FPLSNWTELDIWQY 197


>gi|195152121|ref|XP_002016985.1| GL22056 [Drosophila persimilis]
 gi|194112042|gb|EDW34085.1| GL22056 [Drosophila persimilis]
          Length = 419

 Score = 41.8 bits (96), Expect = 0.089,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 2/60 (3%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + +L +SGG D+S  L W LD+   V  +  D GQ+   +          I        D
Sbjct: 5  TVILAYSGGLDTSCILKWLLDQQYNVICVLADVGQK--EDFVAAEKKALNIGANKVIVVD 62


>gi|126441544|ref|YP_001059537.1| sulfate adenylyltransferase subunit 2 [Burkholderia pseudomallei
           668]
 gi|126221037|gb|ABN84543.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei 668]
          Length = 321

 Score = 41.8 bits (96), Expect = 0.089,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 51/195 (26%), Gaps = 19/195 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF---------DRVETLSFDYGQRNKVELE 51
           + +++ +     LLFSGG+DS   L  AL  F              +  D G      ++
Sbjct: 35  LRELVAECSKPALLFSGGKDSVVVLHLALKAFGLGANRRTTLPFPLVHIDTGHNYDEVID 94

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
            R    ++I          L   H+      G +     T +         L      G 
Sbjct: 95  FRDRRAQQIGA-------ELVVGHVEDSIARGTVVLRRETDSRNAAQAVTLLETIERHGY 147

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
             +                I     E         R +        ++ G    V    P
Sbjct: 148 TAMIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWSVYNARLHRGEHLRV---FP 204

Query: 172 LMWLKKYETWKLAQD 186
           +    + + W+    
Sbjct: 205 ISNWTELDVWQYIAR 219


>gi|46446494|ref|YP_007859.1| hypothetical protein pc0860 [Candidatus Protochlamydia
          amoebophila UWE25]
 gi|46400135|emb|CAF23584.1| conserved hypothetical protein [Candidatus Protochlamydia
          amoebophila UWE25]
          Length = 246

 Score = 41.8 bits (96), Expect = 0.089,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 16/45 (35%), Gaps = 6/45 (13%)

Query: 2  NDIIKKAPSALLLFSGGQDSSTCLSWALD---RFD---RVETLSF 40
           +++K      +  SGG+DS T L        R      +  +  
Sbjct: 28 YEMLKDVSKIAVALSGGKDSLTLLYLLKAISGRGFPNLEIHAIHV 72


>gi|266624414|ref|ZP_06117349.1| argininosuccinate synthase [Clostridium hathewayi DSM 13479]
 gi|288863737|gb|EFC96035.1| argininosuccinate synthase [Clostridium hathewayi DSM 13479]
          Length = 409

 Score = 41.8 bits (96), Expect = 0.090,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 60/212 (28%), Gaps = 23/212 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L +SGG D++  + W  + F   V     D GQ N+++         K+     
Sbjct: 1   MKEKVILAYSGGLDTTAIIPWLKENFDYEVVCCCIDCGQGNELDGLEERA---KLSGASK 57

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            + + L +D      +       + +      +   ++    +  R +         A  
Sbjct: 58  LYIEDLVDDFCDNYIV---PCVQANSVYENKYLLGTSMARPAIAKRLVEIARKEGATAIC 114

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G T         +           I A     ++                + +  +  +
Sbjct: 115 HGATGKGNDQIRFELGIKALAPDLKIIAPWRMTDV-----------WTMQSREDEIEYCK 163

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
             G    +NL     ++ Y   R+  +    G
Sbjct: 164 QHG----INLPFSADNS-YSRDRNLWHISHEG 190


>gi|227903173|ref|ZP_04020978.1| cell cycle [Lactobacillus acidophilus ATCC 4796]
 gi|227868978|gb|EEJ76399.1| cell cycle [Lactobacillus acidophilus ATCC 4796]
          Length = 418

 Score = 41.8 bits (96), Expect = 0.090,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 54/192 (28%), Gaps = 27/192 (14%)

Query: 7   KAPSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +    L+  SGG DS   L         +   +    F++  R+  E E    + K   +
Sbjct: 15  ENKKLLVAASGGPDSMALLDMLKDLQKKQKFELIAAHFNHQLRSDSEEET--RILKDYCQ 72

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                         +PL +     +      +    ++          +N          
Sbjct: 73  KNE-----------IPLFVAKWAKNEQPKSGIEAAAREVRYNFLTKIAKNETADYLLTAH 121

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
                I NI               R      + +   +G+   VT+  PL+   K E   
Sbjct: 122 HGDDLIENI----------LLKFIRSGNPEEMNSLQAVGVMHGVTLLRPLLSSSKQEILA 171

Query: 183 LAQDIGGQDLVN 194
             ++ G   +V+
Sbjct: 172 YDKERGISFIVD 183


>gi|58584700|ref|YP_198273.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Wolbachia endosymbiont strain TRS of Brugia malayi]
 gi|75497846|sp|Q5GSJ3|GUAA_WOLTR RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|58419016|gb|AAW71031.1| GMP synthase [Wolbachia endosymbiont strain TRS of Brugia malayi]
          Length = 520

 Score = 41.8 bits (96), Expect = 0.090,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 61/189 (32%), Gaps = 24/189 (12%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +   SGG DSS  ++        ++  +  D G   K +           + L+ +
Sbjct: 220 EKKVIAAVSGGVDSSVAVALTYKAVGKQLNCIFIDTGLLRKNQT----------IALLEE 269

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              +  +   L L+ L  I+     + +                 N  FL+     +  +
Sbjct: 270 IPVNYVDKSNLFLSRLKGITDPEEKRKIIGNTFIEVFEEEAKKIGNADFLMQGTIYSDVV 329

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                         SG+      TI++      L  + ++ +  PL +L K E   L ++
Sbjct: 330 E-------------SGHASGNASTIKSHHNVGGLPEKMNLKLVEPLRYLFKDEVRLLGKE 376

Query: 187 IGGQDLVNL 195
           IG  + +  
Sbjct: 377 IGLSNEIIF 385


>gi|58336616|ref|YP_193201.1| cell cycle [Lactobacillus acidophilus NCFM]
 gi|58253933|gb|AAV42170.1| putative cell cycle [Lactobacillus acidophilus NCFM]
          Length = 423

 Score = 41.8 bits (96), Expect = 0.090,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 54/192 (28%), Gaps = 27/192 (14%)

Query: 7   KAPSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +    L+  SGG DS   L         +   +    F++  R+  E E    + K   +
Sbjct: 20  ENKKLLVAASGGPDSMALLDMLKDLQKKQKFELIAAHFNHQLRSDSEEET--RILKDYCQ 77

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                         +PL +     +      +    ++          +N          
Sbjct: 78  KNE-----------IPLFVAKWAKNEQPKSGIEAAAREVRYNFLTKIAKNETADYLLTAH 126

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWK 182
                I NI               R      + +   +G+   VT+  PL+   K E   
Sbjct: 127 HGDDLIENI----------LLKFIRSGNPEEMNSLQAVGVMHGVTLLRPLLSSSKQEILA 176

Query: 183 LAQDIGGQDLVN 194
             ++ G   +V+
Sbjct: 177 YDKERGISFIVD 188


>gi|329119897|ref|ZP_08248571.1| GMP synthase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327464053|gb|EGF10364.1| GMP synthase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 521

 Score = 41.8 bits (96), Expect = 0.090,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 49/185 (26%), Gaps = 26/185 (14%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKW- 67
           ++L  SGG DSS   +       D++  +  D+G  R            + +   +    
Sbjct: 220 VILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHGLLRQNEGKMVMDMFARNLGVRVIHVD 279

Query: 68  --KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             K  L +   +           +    V    +       ++    I   V  +  A  
Sbjct: 280 AEKQFLDKLAGVTDPERKRKIIGAEFIEVFDAEEKKLTNAKWLAQGTIYPDVIESAGAKT 339

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                I                    ++      L     + +  PL  L K E  +L  
Sbjct: 340 KKAHAI--------------------KSHHNVGGLPENMKLKLLEPLRDLFKDEVRELGV 379

Query: 186 DIGGQ 190
            +G  
Sbjct: 380 ALGLP 384


>gi|302343311|ref|YP_003807840.1| argininosuccinate synthase [Desulfarculus baarsii DSM 2075]
 gi|301639924|gb|ADK85246.1| argininosuccinate synthase [Desulfarculus baarsii DSM 2075]
          Length = 404

 Score = 41.8 bits (96), Expect = 0.090,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 57/182 (31%), Gaps = 13/182 (7%)

Query: 4   IIKKAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKI-V 61
           +     S +L +SGG D+S  L W  + +  +V   + D GQ  ++E      ++     
Sbjct: 1   MANDVKSIVLAYSGGLDTSIILKWLQETYDCQVIAFAADLGQGEELEPVREKAIKTGASK 60

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
             +   ++    D++ P+     I  S      ++           +  R I   +    
Sbjct: 61  VFIDDLREEFARDYVFPMFRANAIYESVYLLGTSIARP-------LIAKRQIEIALAENA 113

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHV----TVHTPLMWLKK 177
            A   G T         + +         I A     +L     +      H   + + K
Sbjct: 114 DAVAHGATGKGNDQVRFELAYQALAPQVRIIAPWRIWDLNSRESLIAYAQKHGIPVPVTK 173

Query: 178 YE 179
            +
Sbjct: 174 AK 175


>gi|261211968|ref|ZP_05926254.1| asparagine synthetase [glutamine-hydrolyzing] [Vibrio sp. RC341]
 gi|260838576|gb|EEX65227.1| asparagine synthetase [glutamine-hydrolyzing] [Vibrio sp. RC341]
          Length = 554

 Score = 41.8 bits (96), Expect = 0.090,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 52/193 (26%), Gaps = 14/193 (7%)

Query: 13  LLFSGGQDSSTCLSWALD------RFDRVETL------SFDYGQRNKVELECRLCVRKKI 60
           +L SGG DSS   + A          D           SF  G     +L+    V +KI
Sbjct: 232 VLLSGGLDSSITSAIAKRFAAMRIEDDEKTAAWWPQLHSFAIGLEGAPDLKAAREVAEKI 291

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  +      ++ +  +  +     +     +        +          + L    
Sbjct: 292 GTVHHEMT-YTIQEGLDAIRDVIYHIETYDVTTIRASTPMFLMGRKIKAMGIKMVLSGEG 350

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
                 G           ++      +   +   + A      +   V   + +L K E 
Sbjct: 351 ADEIFGGYLYFHKAPNAKEFHEETVRKLLALNLFDCARANKSLAAWGVEGRVPFLDK-EF 409

Query: 181 WKLAQDIGGQDLV 193
             +A  +   D +
Sbjct: 410 IDVAMRLNPADKM 422


>gi|194333159|ref|YP_002015019.1| GMP synthase [Prosthecochloris aestuarii DSM 271]
 gi|194310977|gb|ACF45372.1| GMP synthase, large subunit [Prosthecochloris aestuarii DSM 271]
          Length = 518

 Score = 41.8 bits (96), Expect = 0.090,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 57/183 (31%), Gaps = 22/183 (12%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           + +   SGG DS+            ++  +  + G   K E E  + + K +        
Sbjct: 227 TVICGISGGVDSTVAAVLVSKAIGKKLHCVFVNNGLLRKNEGEKVMSILKPLG-----LN 281

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            ++ +   + L  L  ++     + +               GR  I +        +  +
Sbjct: 282 ITMVDAEEIFLKRLKSVASPEKKRKI--------------IGRTFIHIFEEQIHEEKFLV 327

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
              +        S       +TI++      L     + +  PL  L K E   + +++G
Sbjct: 328 QGTLYPDVIESVSVK--GPSETIKSHHNVGGLPKRMKLKLIEPLRELFKDEVRAVGRELG 385

Query: 189 GQD 191
             +
Sbjct: 386 IDE 388


>gi|156740507|ref|YP_001430636.1| NAD synthetase [Roseiflexus castenholzii DSM 13941]
 gi|156231835|gb|ABU56618.1| NAD+ synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 342

 Score = 41.8 bits (96), Expect = 0.090,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 70/222 (31%), Gaps = 34/222 (15%)

Query: 12  LLL-FSGGQDSSTCLS--------------WALDRFDRVETLSF------DYG------- 43
           ++L  SGG DSS  L+                 +R    +TL         YG       
Sbjct: 36  VVLGISGGIDSSVALALCVRAFGPQRVAALMMPERDSDPQTLHLSEMVARHYGVEPILED 95

Query: 44  -QRNKVELECRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNN 102
                   +C     + +  + P++  + G    + L      + +    ++ +   D  
Sbjct: 96  ITPALEGFDCYRRRDEAVRRIFPEYDAAHGYTMRIVLPQNLLDTDTLNVFSLEIITPDGE 155

Query: 103 LPNTFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGM 162
           +    +P R    +V A+    R  +  +        Y+       +          +  
Sbjct: 156 VKRKRLPPREYAQIVAASNFKQRTRMAIVYYHAELRHYAVVGTPNKNEHD---QGFFVKY 212

Query: 163 ESHVTVHTPLMWLKKYETWKLAQDIGGQDLVNL--ILEESHT 202
                   P++ L K + ++LA+ +   +++       ++++
Sbjct: 213 GDGSADLRPIVHLYKTQIYQLARYLDVPEVIQRRPPTSDTYS 254


>gi|886939|emb|CAA58903.1| hypothetical protein [Streptomyces clavuligerus]
 gi|1586121|prf||2203286A ORF 1
          Length = 435

 Score = 41.8 bits (96), Expect = 0.090,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 21/57 (36%), Gaps = 2/57 (3%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           L++ SGG DSS   + A      ++T+S   G     E      V   +     +  
Sbjct: 167 LVVLSGGIDSSGVAACAHRAAGELDTVSM--GTDTSNEFREARAVVDHLRTRHREIT 221


>gi|254387585|ref|ZP_05002824.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294815029|ref|ZP_06773672.1| Carboxyethyl-arginine beta-lactam-synthase [Streptomyces
           clavuligerus ATCC 27064]
 gi|326443396|ref|ZP_08218130.1| asparagine synthase (glutamine-hydrolyzing) [Streptomyces
           clavuligerus ATCC 27064]
 gi|41016784|sp|Q9R8E3|BLS_STRCL RecName: Full=Carboxyethyl-arginine beta-lactam-synthase; AltName:
           Full=Beta-lactam synthetase
 gi|18158792|pdb|1JGT|A Chain A, Crystal Structure Of Beta-Lactam Synthetase
 gi|18158793|pdb|1JGT|B Chain B, Crystal Structure Of Beta-Lactam Synthetase
 gi|24987669|pdb|1M1Z|A Chain A, Beta-Lactam Synthetase Apo Enzyme
 gi|24987670|pdb|1M1Z|B Chain B, Beta-Lactam Synthetase Apo Enzyme
 gi|24987733|pdb|1MB9|A Chain A, Beta-Lactam Synthetase Complexed With Atp
 gi|24987734|pdb|1MB9|B Chain B, Beta-Lactam Synthetase Complexed With Atp
 gi|24987741|pdb|1MBZ|A Chain A, Beta-Lactam Synthetase With Trapped Intermediate
 gi|24987742|pdb|1MBZ|B Chain B, Beta-Lactam Synthetase With Trapped Intermediate
 gi|24987743|pdb|1MC1|A Chain A, Beta-Lactam Synthetase With Product (Dgpc), Amp And Ppi
 gi|24987744|pdb|1MC1|B Chain B, Beta-Lactam Synthetase With Product (Dgpc), Amp And Ppi
 gi|3420295|gb|AAC31901.1| beta-lactam synthetase [Streptomyces clavuligerus]
 gi|9280820|gb|AAF86620.1| beta lactam synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197701311|gb|EDY47123.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294327628|gb|EFG09271.1| Carboxyethyl-arginine beta-lactam-synthase [Streptomyces
           clavuligerus ATCC 27064]
          Length = 513

 Score = 41.8 bits (96), Expect = 0.090,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 21/57 (36%), Gaps = 2/57 (3%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
           L++ SGG DSS   + A      ++T+S   G     E      V   +     +  
Sbjct: 245 LVVLSGGIDSSGVAACAHRAAGELDTVSM--GTDTSNEFREARAVVDHLRTRHREIT 299


>gi|300938597|ref|ZP_07153329.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 21-1]
 gi|300456443|gb|EFK19936.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 21-1]
          Length = 437

 Score = 41.4 bits (95), Expect = 0.091,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 5/48 (10%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYG 43
          +N  +  +   L+ FSGG DS+  L   +          +  +   +G
Sbjct: 5  LNRQLLSSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHG 52


>gi|256372668|ref|YP_003110492.1| tRNA(Ile)-lysidine synthetase [Acidimicrobium ferrooxidans DSM
           10331]
 gi|256009252|gb|ACU54819.1| tRNA(Ile)-lysidine synthetase [Acidimicrobium ferrooxidans DSM
           10331]
          Length = 306

 Score = 41.4 bits (95), Expect = 0.091,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 27/76 (35%), Gaps = 3/76 (3%)

Query: 15  FSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGED 74
            SGG DS    +       RV  +  D+G R     E    V +++  L     +     
Sbjct: 41  VSGGADSLGLAALLAFGGKRVLAIHVDHGLRPGSAREGAD-VARQLAPLGISVLER--RV 97

Query: 75  HILPLAILGDISHSSL 90
            ++P   L   + S+ 
Sbjct: 98  RVIPGPNLEARARSAR 113


>gi|259907561|ref|YP_002647917.1| tRNA(Ile)-lysidine synthase [Erwinia pyrifoliae Ep1/96]
 gi|224963183|emb|CAX54667.1| tRNA(Ile)-lysidine synthase [Erwinia pyrifoliae Ep1/96]
 gi|283477401|emb|CAY73317.1| cell cycle protein [Erwinia pyrifoliae DSM 12163]
          Length = 433

 Score = 41.4 bits (95), Expect = 0.091,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 6/57 (10%)

Query: 8  APSALLL-FSGGQDSSTCLSWALD-RFDRVE----TLSFDYGQRNKVELECRLCVRK 58
             A+LL +SGG DSS  L   +  R  R       +   +G     +     C ++
Sbjct: 13 TERAVLLAYSGGLDSSVLLHQLVQLREQRPHLQLRAVHIHHGLSQLADDWAAHCQQQ 69


>gi|94266278|ref|ZP_01289983.1| Glutamine amidotransferase class-I:GMP synthase-like [delta
           proteobacterium MLMS-1]
 gi|93453129|gb|EAT03600.1| Glutamine amidotransferase class-I:GMP synthase-like [delta
           proteobacterium MLMS-1]
          Length = 518

 Score = 41.4 bits (95), Expect = 0.091,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 58/183 (31%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS   +       +++  +  D G     E +          ++M  +
Sbjct: 221 DRVVLGLSGGVDSSVAAALIHRAIGEQLVCVFVDTGLLRLGEGD----------QVMATF 270

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +++G   I   A    +   +  ++   K +        +       L      A    
Sbjct: 271 AENMGVKVIRVDAEERFMGALAGVEDPEAKRRVIGNMFITIFEEAAGEL------ANTHW 324

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +    I     + +G    +   I++      L  +  + +  PL  L K E   +  ++
Sbjct: 325 LAQGTIYPDVIESAGGKTGKAQNIKSHHNVGGLPEQMQLKLLEPLRELFKDEVRAIGDEL 384

Query: 188 GGQ 190
           G  
Sbjct: 385 GLP 387


>gi|46906451|ref|YP_012840.1| hypoxanthine phosphoribosyltransferase, fusion [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|61216556|sp|Q724J4|TILS_LISMF RecName: Full=Bifunctional protein tilS/hprT; Includes: RecName:
           Full=tRNA(Ile)-lysidine synthase; AltName:
           Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
           Full=tRNA(Ile)-lysidine synthetase; Includes: RecName:
           Full=Hypoxanthine-guanine phosphoribosyltransferase;
           Short=HGPRT; Short=HGPRTase
 gi|46879715|gb|AAT03017.1| conserved hypothetical protein/hypoxanthine
           phosphoribosyltransferase, fusion [Listeria
           monocytogenes serotype 4b str. F2365]
          Length = 648

 Score = 41.4 bits (95), Expect = 0.091,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 54/194 (27%), Gaps = 18/194 (9%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRV-ETLSFDYGQRNKVELECRLCVRKKIV 61
           D+I+     L+  SGG DS   L +  +      E +S  +   +  E        + +V
Sbjct: 16  DLIRSDDKLLVAVSGGPDSLALLHFLWNSNLVPKEAISVAHLNHHLRENAANE---QNVV 72

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           E   + +        + +    +     + +   +   D           N + L   A 
Sbjct: 73  ETFCESQGIPFYIEEVDVKSRAESLQKGIEETARIVRYDFFEKVMAEKKINKLALAHHAD 132

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
                 +  +V G     +SG    R                       P + + K E  
Sbjct: 133 DQIETILMRLVRGSASIGWSGIQPKRELKGGQA--------------IRPFLPITKAEII 178

Query: 182 KLAQDIGGQDLVNL 195
             AQ       ++ 
Sbjct: 179 DYAQKHELAYEIDE 192


>gi|37524690|ref|NP_928034.1| tRNA(Ile)-lysidine synthetase [Photorhabdus luminescens subsp.
          laumondii TTO1]
 gi|61216585|sp|Q7N8N0|TILS_PHOLL RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
          Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
          Full=tRNA(Ile)-lysidine synthetase
 gi|36784115|emb|CAE12984.1| Putative cell cycle protein MesJ [Photorhabdus luminescens subsp.
          laumondii TTO1]
          Length = 442

 Score = 41.4 bits (95), Expect = 0.091,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 6/54 (11%)

Query: 9  PSALLLFSGGQDSSTCLSWA------LDRFDRVETLSFDYGQRNKVELECRLCV 56
             L+ FSGG DSS  L          ++  ++  +   +G   K +     C 
Sbjct: 20 KKILVGFSGGLDSSVLLHLLVNWRNQHNQKIQLRAIHIHHGLNLKADQWIEHCQ 73


>gi|108803920|ref|YP_643857.1| hypothetical protein Rxyl_1079 [Rubrobacter xylanophilus DSM
          9941]
 gi|108765163|gb|ABG04045.1| conserved hypothetical protein [Rubrobacter xylanophilus DSM
          9941]
          Length = 279

 Score = 41.4 bits (95), Expect = 0.091,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 2/76 (2%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRK 58
          +  I+    SAL+ FSGG DSS  L+ A+     +RV  ++         ELE    +  
Sbjct: 11 LEAIVAPHGSALVAFSGGVDSSLALAVAVRALSRERVLAVTSCNETYLPSELEKARELAA 70

Query: 59 KIVELMPKWKDSLGED 74
           +            +D
Sbjct: 71 SLGVRHEVINTRELDD 86


>gi|327474241|gb|EGF19648.1| GMP synthase [Streptococcus sanguinis SK408]
          Length = 520

 Score = 41.4 bits (95), Expect = 0.092,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 50/188 (26%), Gaps = 24/188 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM--P 65
              LL  SGG DSS           D++  +  D+G   K E      V   +       
Sbjct: 226 KKVLLGLSGGVDSSVVGVLLQKAIGDQLICIFVDHGLLRKGE---ADQVMDMLGGKFGLN 282

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             K    +  +  LA + +                ++  +     + +        +   
Sbjct: 283 IIKADAAKRFLDKLAGVSEPEQKRKIIGNEFVYVFDDEASKLKDVKFLAQGTLYTDVIES 342

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                                   TI++      L  +    +  PL  L K E   L  
Sbjct: 343 ------------------GTDTAQTIKSHHNVGGLPEDMRFELIEPLNTLYKDEVRALGT 384

Query: 186 DIGGQDLV 193
           ++G  D +
Sbjct: 385 ELGMPDEI 392


>gi|296209631|ref|XP_002751628.1| PREDICTED: asparagine synthetase [glutamine-hydrolyzing]
           [Callithrix jacchus]
          Length = 561

 Score = 41.4 bits (95), Expect = 0.092,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 4/62 (6%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRV---ETL-SFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            L SGG DSS   +  L +         L +F  G  +  +L     V   I     +  
Sbjct: 255 CLLSGGLDSSLVAATLLKQLKEAQVQYPLQTFAIGMEDSPDLLAARKVANHIGSEHHEVL 314

Query: 69  DS 70
            +
Sbjct: 315 FN 316


>gi|256831900|ref|YP_003160627.1| sulfate adenylyltransferase, small subunit [Jonesia denitrificans
          DSM 20603]
 gi|256685431|gb|ACV08324.1| sulfate adenylyltransferase, small subunit [Jonesia denitrificans
          DSM 20603]
          Length = 305

 Score = 41.4 bits (95), Expect = 0.092,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 4/56 (7%)

Query: 13 LLFSGGQDSSTCLSWALDRF----DRVETLSFDYGQRNKVELECRLCVRKKIVELM 64
          LLFSGG+DS   L  A   F         +  D G      LE R  + KK+   +
Sbjct: 37 LLFSGGKDSVVMLHLARKAFWPAPVPFPLIHVDTGHNFPEVLEYRDRIVKKLNARL 92


>gi|255089286|ref|XP_002506565.1| predicted protein [Micromonas sp. RCC299]
 gi|226521837|gb|ACO67823.1| predicted protein [Micromonas sp. RCC299]
          Length = 545

 Score = 41.4 bits (95), Expect = 0.092,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 52/200 (26%), Gaps = 11/200 (5%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
           N  +      +   SGG DS+   +       DR+     D G     E E    V K  
Sbjct: 232 NQKVGPDDHVICALSGGVDSAVAATLVHKAIGDRLHCCFVDNGLLRYKEGE---RVMKMF 288

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            + +      L    I   A L              K         F   ++ +      
Sbjct: 289 KDHLH-----LPVTKIDDSARLLAKLKGVADPEKKRKTIGAQFIEVFKEYKDDVEKKTGV 343

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
              + +  T     +      G       TI++      L  E    +  PL  L K E 
Sbjct: 344 RPKFLVQGTLYPDVIESCPPPGSDQKHSHTIKSHHNVGGLPKELGFELVEPLRMLFKDEV 403

Query: 181 WKLA--QDIGGQDLVNLILE 198
            KL    D+    +      
Sbjct: 404 RKLGLLMDVPQAFISRHPFP 423


>gi|169628750|ref|YP_001702399.1| sulfate adenylyltransferase subunit 2 [Mycobacterium abscessus
          ATCC 19977]
 gi|169240717|emb|CAM61745.1| Sulfate adenylate transferase, subunit 2 (CysD) [Mycobacterium
          abscessus]
          Length = 308

 Score = 41.4 bits (95), Expect = 0.092,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 4/52 (7%)

Query: 12 LLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKK 59
          +LLFSGG+DS+  L  AL  F         L  D G      L  R  + ++
Sbjct: 39 VLLFSGGKDSTVLLHIALKAFWPAPLPFSLLHVDTGHNLPEVLAFRDEIVER 90


>gi|254302954|ref|ZP_04970312.1| NAD(+) synthase [Fusobacterium nucleatum subsp. polymorphum ATCC
          10953]
 gi|148323146|gb|EDK88396.1| NAD(+) synthase [Fusobacterium nucleatum subsp. polymorphum ATCC
          10953]
          Length = 258

 Score = 41.4 bits (95), Expect = 0.092,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 19/60 (31%), Gaps = 2/60 (3%)

Query: 10 SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           A+L  SGG DS+       D    + V  +   Y   N   L     V + +       
Sbjct: 30 KAVLGLSGGIDSALVAYLLRDALGKENVLAIMMPYKSSNPDSLNHAKLVVEDLGINSKTI 89


>gi|120553850|ref|YP_958201.1| tRNA(Ile)-lysidine synthetase [Marinobacter aquaeolei VT8]
 gi|120323699|gb|ABM18014.1| tRNA(Ile)-lysidine synthetase [Marinobacter aquaeolei VT8]
          Length = 445

 Score = 41.4 bits (95), Expect = 0.092,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 28/87 (32%), Gaps = 5/87 (5%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +  SGG DSS  L      + RV  L  ++ Q      +      +  ++L       L 
Sbjct: 32  VALSGGLDSSLLLHVVAAAYPRVRALHINH-QLQSNHDQTE----RACIDLCAGLGVELQ 86

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQ 99
              +      G +  S+      +  +
Sbjct: 87  VRRVNVATGAGSLEESARAARYEVFRE 113


>gi|104783178|ref|YP_609676.1| cell cycle protein MesJ [Pseudomonas entomophila L48]
 gi|95112165|emb|CAK16892.1| putative cell cycle protein MesJ [Pseudomonas entomophila L48]
          Length = 431

 Score = 41.4 bits (95), Expect = 0.092,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 18/58 (31%), Gaps = 11/58 (18%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
          + FSGG DS+  L               DY + +       + V   +      W D 
Sbjct: 19 VAFSGGLDSTVLLHLLA-----------DYARHHPAPPLRAIHVHHGLQAAADAWPDH 65


>gi|47094954|ref|ZP_00232567.1| GMP synthase [Listeria monocytogenes str. 1/2a F6854]
 gi|254898730|ref|ZP_05258654.1| GMP synthase [Listeria monocytogenes J0161]
 gi|254911781|ref|ZP_05261793.1| GMP synthase [Listeria monocytogenes J2818]
 gi|254936107|ref|ZP_05267804.1| GMP synthase [Listeria monocytogenes F6900]
 gi|47016572|gb|EAL07492.1| GMP synthase [Listeria monocytogenes str. 1/2a F6854]
 gi|258608697|gb|EEW21305.1| GMP synthase [Listeria monocytogenes F6900]
 gi|293589733|gb|EFF98067.1| GMP synthase [Listeria monocytogenes J2818]
          Length = 514

 Score = 41.4 bits (95), Expect = 0.092,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 52/186 (27%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++  +  D+G   K E      V   +       
Sbjct: 220 KKVLLALSGGVDSSVVGVLIHKAIGDQLTCIFVDHGLLRKGE---ADQVMTTLQGEFNMN 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +         + G         +   K +       +V       L     LA    
Sbjct: 277 IIKVDAKKRFMDKLAG-------VSDPEQKRKIIGNEFIYVFDDEANKLDGVEFLAQGTL 329

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
            T+I+                 TI++      L  +    +  PL  L K E   L  ++
Sbjct: 330 YTDIIESGTA---------TAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGTEL 380

Query: 188 GGQDLV 193
           G  D +
Sbjct: 381 GMPDAI 386


>gi|325282941|ref|YP_004255482.1| GMP synthase (glutamine-hydrolyzing) [Deinococcus proteolyticus
           MRP]
 gi|324314750|gb|ADY25865.1| GMP synthase (glutamine-hydrolyzing) [Deinococcus proteolyticus
           MRP]
          Length = 514

 Score = 41.4 bits (95), Expect = 0.093,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 47/185 (25%), Gaps = 22/185 (11%)

Query: 13  LLF--SGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           +L   SGG DSST          DR+  +  D+G     E E      +     +     
Sbjct: 222 VLLGISGGVDSSTLALLLSRAVGDRLTAVFVDHGLLRLNEREQVETALRGAGVNVVTVDA 281

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                H L                     +           R              L   
Sbjct: 282 REEFMHHLD---------------GVSDPEQKRKIIGREFIRVFDRETEKYGPFEFLAQG 326

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   V E+            I++      L  +    +  P   L K E  ++A+ +G 
Sbjct: 327 TLYPDVIESAGG----EGAANIKSHHNVGGLPEDLAFKLVEPFRTLFKDEVREIAKLLGL 382

Query: 190 QDLVN 194
            D + 
Sbjct: 383 PDDIR 387


>gi|323975644|gb|EGB70740.1| PP-loop family protein [Escherichia coli TW10509]
          Length = 431

 Score = 41.4 bits (95), Expect = 0.093,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 22/65 (33%)

Query: 12 LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
          L+ FSGG DS+  L   +        ++      +           K    +  +W+  L
Sbjct: 16 LVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHGLSANADAWVKHCENICQQWQVPL 75

Query: 72 GEDHI 76
            + +
Sbjct: 76 VVERV 80


>gi|323497993|ref|ZP_08103002.1| tRNA(Ile)-lysidine synthase [Vibrio sinaloensis DSM 21326]
 gi|323317038|gb|EGA70040.1| tRNA(Ile)-lysidine synthase [Vibrio sinaloensis DSM 21326]
          Length = 434

 Score = 41.4 bits (95), Expect = 0.093,   Method: Composition-based stats.
 Identities = 10/91 (10%), Positives = 24/91 (26%), Gaps = 9/91 (9%)

Query: 5   IKKAPSALLLFSGGQDSSTCLSWALDRF----DRVETLSFDYGQRNKVELECRLCVRKKI 60
           +      ++ FSGG DS   L+ A             +   +G              ++ 
Sbjct: 15  LNPHSRLVIGFSGGVDSQVLLTLAARFGQQYQCECLAVHVHHG-----LSGNADRWAEQC 69

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLT 91
            +   +       + ++       I   +  
Sbjct: 70  AQWAHERGVPFVVEKVILQPQGKSIEACARE 100


>gi|283832117|ref|ZP_06351858.1| GMP synthase [Citrobacter youngae ATCC 29220]
 gi|291071745|gb|EFE09854.1| GMP synthase [Citrobacter youngae ATCC 29220]
          Length = 525

 Score = 41.4 bits (95), Expect = 0.093,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 46/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G     E                + 
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLNE--------------AQQV 273

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            D  G+   L +  +   S            +        V                 L 
Sbjct: 274 MDMFGDHFGLNIVHVEGESRFLEALKGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLA 333

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I   V E+  S         I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 334 QGTIYPDVIESAASATGKAHV--IKSHHNVGGLPKEMKMGLVEPLRELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|291087862|ref|ZP_06347712.2| argininosuccinate synthase [Clostridium sp. M62/1]
 gi|291073707|gb|EFE11071.1| argininosuccinate synthase [Clostridium sp. M62/1]
          Length = 419

 Score = 41.4 bits (95), Expect = 0.093,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 52/212 (24%), Gaps = 23/212 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L +SGG D++  + W  + F   V     D GQ    E    L  R K+     
Sbjct: 11  MKEKVILAYSGGLDTTAIIPWLKEHFDYEVICCCIDCGQ---GEELTGLEERAKLSGASK 67

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            + + + +D             + +   V       N                   +A +
Sbjct: 68  LYIEDIVDD----------FCDNYIVPCVQAGAVYENKYLLGTSMARPGIAKKLVEIARK 117

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G + I  G                  A +  I                  + +     +
Sbjct: 118 EGASAICHGATGKGNDQIRFELGIKALAPDLKIIAPWRMTD----VWTMQSRQDEIDYCK 173

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
             G     +       + Y   R+  +    G
Sbjct: 174 AHGIDLPFSAD-----SSYSRDRNLWHISHEG 200


>gi|295835826|ref|ZP_06822759.1| sulfate adenylyltransferase, small subunit [Streptomyces sp. SPB74]
 gi|197699869|gb|EDY46802.1| sulfate adenylyltransferase, small subunit [Streptomyces sp. SPB74]
          Length = 312

 Score = 41.4 bits (95), Expect = 0.093,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 44/181 (24%), Gaps = 15/181 (8%)

Query: 12  LLLFSGGQDSSTCLSWALDRF----DRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++LFSGG+DS   L  AL  F         L  D G      LE R  V  +    +   
Sbjct: 43  VILFSGGKDSIVMLHLALKAFAPAPVPFTLLHVDTGHNFPEVLEYRDRVVAEHGLRLHVA 102

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
                    +    L +    +      + + +    + F          F         
Sbjct: 103 SVQEY----IDNGTLRERPDGTRNPLQTVPLTEAIREHRFDAV-------FGGGRRDEEK 151

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                      D     D R       +               PL    + + W+     
Sbjct: 152 ARAKERVFSLRDEFSQWDPRRQRPELWQLYNGRHAPGEHVRVFPLSNWTELDVWQYIARE 211

Query: 188 G 188
           G
Sbjct: 212 G 212


>gi|145641009|ref|ZP_01796590.1| argininosuccinate synthase [Haemophilus influenzae R3021]
 gi|145274170|gb|EDK14035.1| argininosuccinate synthase [Haemophilus influenzae 22.4-21]
          Length = 72

 Score = 41.4 bits (95), Expect = 0.093,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 17/40 (42%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQ 44
          + K     + FSGG D+S  L W   +       + + GQ
Sbjct: 9  LPKGQKVGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQ 48


>gi|84687702|ref|ZP_01015575.1| PP-loop family protein [Maritimibacter alkaliphilus HTCC2654]
 gi|84664285|gb|EAQ10776.1| PP-loop family protein [Rhodobacterales bacterium HTCC2654]
          Length = 417

 Score = 41.4 bits (95), Expect = 0.093,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 23/78 (29%), Gaps = 12/78 (15%)

Query: 12 LLLFSGGQDSSTCLSWALD----RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
          ++  SGG DS   L  A      +   V  L+ D+G R++   E           +    
Sbjct: 24 VVAVSGGGDSMALLHVAQAWGRTQGKAVSALTVDHGLRDEAATEAAR--------VAEIC 75

Query: 68 KDSLGEDHILPLAILGDI 85
           D       L        
Sbjct: 76 ADLGVAHRTLDWPDWDGQ 93


>gi|295092425|emb|CBK78532.1| argininosuccinate synthase [Clostridium cf. saccharolyticum K10]
          Length = 409

 Score = 41.4 bits (95), Expect = 0.094,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 52/212 (24%), Gaps = 23/212 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L +SGG D++  + W  + F   V     D GQ    E    L  R K+     
Sbjct: 1   MKEKVILAYSGGLDTTAIIPWLKEHFDYEVICCCIDCGQ---GEELTGLEERAKLSGASK 57

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            + + + +D             + +   V       N                   +A +
Sbjct: 58  LYIEDIVDD----------FCDNYIVPCVQAGAVYENKYLLGTSMARPGIAKKLVEIARK 107

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G + I  G                  A +  I                  + +     +
Sbjct: 108 EGASAICHGATGKGNDQIRFELGIKALAPDLKIIAPWRMTD----VWTMQSRQDEIDYCK 163

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
             G     +       + Y   R+  +    G
Sbjct: 164 AHGIDLPFSAD-----SSYSRDRNLWHISHEG 190


>gi|240144382|ref|ZP_04742983.1| sulfate adenylate transferase, subunit 2 [Roseburia intestinalis
           L1-82]
 gi|257203634|gb|EEV01919.1| sulfate adenylate transferase, subunit 2 [Roseburia intestinalis
           L1-82]
 gi|291535605|emb|CBL08717.1| sulfate adenylyltransferase subunit 2 [Roseburia intestinalis
           M50/1]
 gi|291540851|emb|CBL13962.1| sulfate adenylyltransferase subunit 2 [Roseburia intestinalis
           XB6B4]
          Length = 299

 Score = 41.4 bits (95), Expect = 0.094,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 52/182 (28%), Gaps = 14/182 (7%)

Query: 9   PSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIVELM 64
              ++L+S G+DSS  L  A+  F         L  D   + +  +E R  + K+    M
Sbjct: 26  EKPVMLYSIGKDSSVMLHLAMKAFYPEKPPFPFLHIDTTWKFREMIEFRDRIAKENGIEM 85

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
             + +  G D  +     G      +      +            G              
Sbjct: 86  LVYTNQEGVDAGINPFDHGSAYTDIMKTQALKQALKKYEFTAAFGGGRRDE-------EK 138

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
                 I     E       + R +  +   T IN G    V    P+    + + W+  
Sbjct: 139 SRAKERIFSFRNEAQAWDPKNQRPEMWKLYNTKINKGESIRV---FPISNWTEKDIWQYI 195

Query: 185 QD 186
           + 
Sbjct: 196 KR 197


>gi|29840331|ref|NP_829437.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Chlamydophila caviae GPIC]
 gi|33301148|sp|Q822V6|GUAA_CHLCV RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|29834680|gb|AAP05315.1| GMP synthase [Chlamydophila caviae GPIC]
          Length = 512

 Score = 41.4 bits (95), Expect = 0.094,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 53/189 (28%), Gaps = 20/189 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +    LL  SGG DSS       +   DR+  +  D G   K E+E        +   + 
Sbjct: 216 ETERVLLGLSGGVDSSVLAVLLHNALGDRLSCVFVDTGLLRKNEVEEVKQQFSSLGLEIL 275

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
               S    H L      +     +         + +                    A  
Sbjct: 276 VVDASEKFFHDLSGIEDPEQKRKVIGAAFIEVFDEVSRNLDVQWLAQGTIYSDVIESAKS 335

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
              T ++                   ++      L  + ++ +  PL +L K E   L +
Sbjct: 336 CDATQVI-------------------KSHHNVGGLPEKLNLKLLEPLRFLFKDEVRALGK 376

Query: 186 DIGGQDLVN 194
            +G  D++ 
Sbjct: 377 VLGLPDVLI 385


>gi|21672395|ref|NP_660462.1| putative cell cycle protein MesJ [Buchnera aphidicola str. Sg
          (Schizaphis graminum)]
 gi|25090671|sp|Q8KA23|TILS_BUCAP RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
          Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
          Full=tRNA(Ile)-lysidine synthetase
 gi|21623002|gb|AAM67673.1| putative cell cycle protein MesJ [Buchnera aphidicola str. Sg
          (Schizaphis graminum)]
          Length = 445

 Score = 41.4 bits (95), Expect = 0.094,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 23/57 (40%), Gaps = 7/57 (12%)

Query: 12 LLLFSGGQDSSTCLSWALDRFD-----RVETLSFDYG--QRNKVELECRLCVRKKIV 61
          L+ +SGG DS+  L   L   +     ++  +  ++     +K   E  + +  K  
Sbjct: 15 LIAYSGGIDSTVLLYKMLKIKEKNPQIKIRAIHINHNLHPSSKKWEEHCIKICHKYK 71


>gi|326571824|gb|EGE21830.1| GMP synthase [Moraxella catarrhalis BC7]
          Length = 519

 Score = 41.4 bits (95), Expect = 0.094,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 50/189 (26%), Gaps = 17/189 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS   +       D++  +  D G     E +    V +   E M  
Sbjct: 221 NQKVLLGLSGGVDSSVVAALLHRAIGDQLTCVFVDNGLLRLNEGD---QVMQMFAENMGI 277

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                  +     A+ G     +  K +  +  +                          
Sbjct: 278 CVIRADSEARFLNALAGVSDPEAKRKIIGREFIEVFSEEARKLDGVKFLAQGT------- 330

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                 I     + +     +   I++      L  +    +  PL  L K E  KL   
Sbjct: 331 ------IYPDVIESAASKQGKAHVIKSHHNVGGLPDDLAFELVEPLRDLFKDEVRKLGVA 384

Query: 187 IGGQDLVNL 195
           +G    +  
Sbjct: 385 LGIPHHMIY 393


>gi|326560705|gb|EGE11073.1| GMP synthase [Moraxella catarrhalis 46P47B1]
          Length = 519

 Score = 41.4 bits (95), Expect = 0.094,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 50/189 (26%), Gaps = 17/189 (8%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               LL  SGG DSS   +       D++  +  D G     E +    V +   E M  
Sbjct: 221 NQKVLLGLSGGVDSSVVAALLHRAIGDQLTCVFVDNGLLRLNEGD---QVMQMFAENMGI 277

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                  +     A+ G     +  K +  +  +                          
Sbjct: 278 CVIRADSEARFLNALAGVSDPEAKRKIIGREFIEVFSEEARKLDGVKFLAQGT------- 330

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                 I     + +     +   I++      L  +    +  PL  L K E  KL   
Sbjct: 331 ------IYPDVIESAASKQGKAHVIKSHHNVGGLPDDLAFELVEPLRDLFKDEVRKLGVA 384

Query: 187 IGGQDLVNL 195
           +G    +  
Sbjct: 385 LGIPHHMIY 393


>gi|319899020|ref|YP_004159113.1| NH3-dependent NAD synthetase [Bartonella clarridgeiae 73]
 gi|319402984|emb|CBI76537.1| NH3-dependent NAD synthetase [Bartonella clarridgeiae 73]
          Length = 558

 Score = 41.4 bits (95), Expect = 0.094,   Method: Composition-based stats.
 Identities = 19/150 (12%), Positives = 45/150 (30%), Gaps = 3/150 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVEL 63
            +    +L FSGG DS+ C + A+D    +RV  +   Y   ++  L+        +   
Sbjct: 288 NRFKDVILGFSGGIDSALCAAIAVDALGAERVCAVMMPYYYTSQESLKDAKDCAHLLGCR 347

Query: 64  MPKWK-DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
                     E  +  +A +     + +T+         ++  T       + +      
Sbjct: 348 YEMIPILKPVESFLSVMAPIFSGLQTDVTEENLQSRIRGSVLMTLSNKFGSMVITTGNKS 407

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIR 152
              +G   +   +           +    +
Sbjct: 408 EMAVGYATLYGDMNGGFNPIKDIYKMQVYK 437


>gi|300728582|ref|ZP_07061940.1| sulfate adenylyltransferase, small subunit [Prevotella bryantii
           B14]
 gi|299774151|gb|EFI70785.1| sulfate adenylyltransferase, small subunit [Prevotella bryantii
           B14]
          Length = 301

 Score = 41.4 bits (95), Expect = 0.094,   Method: Composition-based stats.
 Identities = 23/189 (12%), Positives = 43/189 (22%), Gaps = 22/189 (11%)

Query: 13  LLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIVELMPK-- 66
           +LFSGG+DS      A   F       + L  D G   +  L+ R  + +K+   +    
Sbjct: 32  ILFSGGKDSIVVTYLAYKAFYPAKIPFQLLHIDTGHNFQETLDYRDALVEKLGADLIIGS 91

Query: 67  ----------------WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPG 110
                           +           L  L      +         +       F   
Sbjct: 92  VQESIDQGRVKEETGYYASRNRLQTTTLLDSLEKYKFDAAIGGARRDEEKARAKERFFSH 151

Query: 111 RNIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT 170
           R+             L             +  +P      +   +      +       T
Sbjct: 152 RDEFGQWNPKNQRPELWNIFNGRKNMGEHFRVFPISNWTEMDVWQYIYLENIPMPSLYFT 211

Query: 171 PLMWLKKYE 179
               + K +
Sbjct: 212 HEREVFKRD 220


>gi|297618556|ref|YP_003706661.1| PP-loop domain-containing protein [Methanococcus voltae A3]
 gi|297618616|ref|YP_003706721.1| PP-loop domain-containing protein [Methanococcus voltae A3]
 gi|297377533|gb|ADI35688.1| PP-loop domain protein [Methanococcus voltae A3]
 gi|297377593|gb|ADI35748.1| PP-loop domain protein [Methanococcus voltae A3]
          Length = 393

 Score = 41.4 bits (95), Expect = 0.094,   Method: Composition-based stats.
 Identities = 23/207 (11%), Positives = 60/207 (28%), Gaps = 10/207 (4%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWA----LDRFDRVETLSFDYGQRNKVELECRLCVR 57
            +II      ++  SGG+DS   +             +  ++ D     K          
Sbjct: 99  YNIINPRNKIIVGLSGGKDSIALMHLLEPYRRKFGISITAITADLNINGKRPWGNIEENP 158

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII--- 114
             + ++  + ++      I+          + LT+N  +K  + +   +    R  I   
Sbjct: 159 N-LKKVHKQCENLNIPHKIISHCGNVVEMSNYLTENAKIKGMEYSPCFSCSLTRRHIITN 217

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM- 173
           ++       Y              +     +  ++   A      +     +  ++  + 
Sbjct: 218 YIHEHCNNNYNTYTNTNNTNNNNGNDENRENRENNRKNAEYKNYKVAFGHTLEDNSDTIL 277

Query: 174 -WLKKYETWKLAQDIGGQDLVNLILEE 199
             + K +  K    I     +N+  E+
Sbjct: 278 ANMFKGDKIKSLAPIKKFTPMNISFED 304


>gi|291523831|emb|CBK89418.1| tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine
           synthetase, C-terminal domain [Eubacterium rectale DSM
           17629]
          Length = 514

 Score = 41.4 bits (95), Expect = 0.094,   Method: Composition-based stats.
 Identities = 25/217 (11%), Positives = 64/217 (29%), Gaps = 19/217 (8%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR---------FDRVETLSFDYGQR---NKVE 49
           N +I    + L+  SGG DS  CL   L+             +E +  ++G R   ++ +
Sbjct: 12  NKMINNHSTVLVALSGGADS-VCLLLVLNEIKRQCADELDFALEAVHVEHGIRGAESRED 70

Query: 50  LECRLCVRKKIVELMPK----WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPN 105
                 + +++                   +        + + +  K VA  ++      
Sbjct: 71  ARFASDLCERLNIPCHVHSVDVPQYAKSHGLGLEEAARILRYEAFEKEVARILRYEAFEE 130

Query: 106 TFVPGRNIIFLVFAATLAYRLGITNIVIGVCETDYSG--YPDCRHDTIRAIETAINLGME 163
                                     V    E +     +   R    + +     + ++
Sbjct: 131 EAGRYPCETANASDQKQGNSRQAVVAVAHHMEDNAETVLFQMLRGSGAKGLAGMHPVSVK 190

Query: 164 SHVTVHTPLMWLKKYETWKLAQDIGGQDLVNLILEES 200
           + VT   PL+   + +  +  ++ G   + +    ++
Sbjct: 191 NGVTYIRPLLSATRAQIEEYLKENGQAFVTDATNADT 227


>gi|297544349|ref|YP_003676651.1| asparagine synthase [Thermoanaerobacter mathranii subsp. mathranii
           str. A3]
 gi|296842124|gb|ADH60640.1| asparagine synthase (glutamine-hydrolyzing) [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
          Length = 503

 Score = 41.4 bits (95), Expect = 0.094,   Method: Composition-based stats.
 Identities = 21/177 (11%), Positives = 47/177 (26%), Gaps = 9/177 (5%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           +  SGG DSS   + A      +   SF  G     +L+    V   +  +  ++  +  
Sbjct: 224 VFLSGGLDSSLIAAIAAKYKKPLH--SFAVGVEGSNDLKNARVVADYVGTIHHEFIYTEE 281

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNI- 131
           +   +   ++      S    +                   + L          G   + 
Sbjct: 282 DIKKILPEVI--YYLESCDPALVRSAVATYFVAKLASNYVKVILSGEGADELFSGYHYLK 339

Query: 132 -VIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                 +         R+     ++    + M   +    P + +   E  + A  I
Sbjct: 340 NYTSPWKLQSELKYITRNLHNTNLQRVDRMTMAHSIEGRVPFLDV---EVLRYAFKI 393


>gi|170289791|ref|YP_001736607.1| argininosuccinate synthase [Candidatus Korarchaeum cryptofilum
           OPF8]
 gi|170173871|gb|ACB06924.1| Argininosuccinate synthase [Candidatus Korarchaeum cryptofilum
           OPF8]
          Length = 412

 Score = 41.4 bits (95), Expect = 0.094,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 42/129 (32%), Gaps = 13/129 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             +L +SGG D++  + W  ++   V T + + GQ  +++   R             ++ 
Sbjct: 7   KVVLAYSGGLDTTVAIKWFEEQGIEVVTFTAELGQGAELDEIERRA-----------YEA 55

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              + + L L       + +         +     ++ +     +       +A R G  
Sbjct: 56  GSSKHYSLNLIDEFADVYVAPAIMANALYEGEYPISSSLSR--PLIASKLVEIAEREGAD 113

Query: 130 NIVIGVCET 138
            +  G    
Sbjct: 114 AVAHGCTSK 122


>gi|116335006|ref|YP_802501.1| argininosuccinate synthase [Candidatus Carsonella ruddii PV]
 gi|122940465|sp|Q05FN6|ASSY_CARRP RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|116235287|dbj|BAF35135.1| argininosuccinate synthase [Candidatus Carsonella ruddii PV]
          Length = 393

 Score = 41.4 bits (95), Expect = 0.094,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQ 44
          +K     +L +SGG D+S  + W  +     V T + D GQ
Sbjct: 1  MKIKEKIVLAYSGGLDTSVIVKWLQNELNFEVITFTADLGQ 41


>gi|71083836|ref|YP_266556.1| NH(3)-dependent NAD+ synthetase NadE [Candidatus Pelagibacter
           ubique HTCC1062]
 gi|71062949|gb|AAZ21952.1| NH(3)-dependent NAD+ synthetase NadE [Candidatus Pelagibacter
           ubique HTCC1062]
          Length = 228

 Score = 41.4 bits (95), Expect = 0.094,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 59/195 (30%), Gaps = 6/195 (3%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKI 60
           MN +  KA S ++  SGG DSS   + +     +   LS    Q+   + +  L  ++ +
Sbjct: 1   MNKMPSKAQSLIIGISGGIDSSVSSTLSAMTGIKTIVLSMPIKQK-SSQHDLSLKHQEWL 59

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
           V+          E H + L  L +   S+L+   +     N+     +     +      
Sbjct: 60  VKNF-----DNVEAHTINLDKLFETFESTLSNFDSELGMANSRARIRMTTLYQVAAANKG 114

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
            +               T Y              ++ +    +S   +   +        
Sbjct: 115 IVVGTGNKVEDFGVGFYTKYGDGGVDISPIADCNKSEVWEIGKSINILQEIIDAAPTDGL 174

Query: 181 WKLAQDIGGQDLVNL 195
           W   +   GQ  +  
Sbjct: 175 WDDGRTDEGQLGLKY 189


>gi|300724776|ref|YP_003714101.1| TilS, tRNA (Ile)-lysidine synthetase [Xenorhabdus nematophila
          ATCC 19061]
 gi|297631318|emb|CBJ92013.1| TilS, tRNA(Ile)-lysidine synthetase [Xenorhabdus nematophila ATCC
          19061]
          Length = 443

 Score = 41.4 bits (95), Expect = 0.095,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 24/65 (36%), Gaps = 10/65 (15%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALD-RFDRVE---------TLSFDYGQRNKVEL 50
          + + I +    LL FSGG DS+  L      R + +           +   +G   K +L
Sbjct: 12 LTEQIGQYKKILLGFSGGLDSTVLLHLLTRLRDEHLHTDRAPIALRAIHIHHGLNAKADL 71

Query: 51 ECRLC 55
              C
Sbjct: 72 WVEHC 76


>gi|189218261|ref|YP_001938903.1| GMP synthase [Methylacidiphilum infernorum V4]
 gi|189185119|gb|ACD82304.1| GMP synthase [Methylacidiphilum infernorum V4]
          Length = 520

 Score = 41.4 bits (95), Expect = 0.095,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 48/178 (26%), Gaps = 17/178 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +        R+  L  D G   + E E           +   
Sbjct: 222 NEKVILGISGGVDSSVTAALVHKAVGKRLYPLFVDTGLLRQNEAET----------ITKL 271

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
            + SLG    + L          L      + +   + + F+         F        
Sbjct: 272 LQQSLG--LKIHLFDASQQFLDRLKNVADPERKRKIIGSLFIRVFEKAAQSFGEVKFLAQ 329

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
           G     I                 I++      L  +    +  PL +L K E  K+ 
Sbjct: 330 GTLYPDIIESAQSGRKGACL----IKSHHNVGGLPKKIPFELIEPLRFLFKDEVRKVG 383


>gi|332361217|gb|EGJ39021.1| GMP synthase [Streptococcus sanguinis SK1056]
          Length = 520

 Score = 41.4 bits (95), Expect = 0.096,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 50/188 (26%), Gaps = 24/188 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM--P 65
              LL  SGG DSS           D++  +  D+G   K E      V   +       
Sbjct: 226 KKVLLGLSGGVDSSVVGVLLQKAIGDQLICIFVDHGLLRKGE---ADQVMDMLGGKFGLN 282

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             K    +  +  LA + D                ++  +     + +        +   
Sbjct: 283 IIKADAAKRFLDKLAGVSDPEQKRKIIGNEFVYVFDDEASKLKDVKFLAQGTLYTDVIES 342

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                                   TI++      L  +    +  PL  L K E   L  
Sbjct: 343 ------------------GTDTAQTIKSHHNVGGLPEDMQFELIEPLNTLYKDEVRALGT 384

Query: 186 DIGGQDLV 193
           ++G  D +
Sbjct: 385 ELGMPDEI 392


>gi|332360642|gb|EGJ38451.1| GMP synthase [Streptococcus sanguinis SK49]
          Length = 520

 Score = 41.4 bits (95), Expect = 0.096,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 50/188 (26%), Gaps = 24/188 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM--P 65
              LL  SGG DSS           D++  +  D+G   K E      V   +       
Sbjct: 226 KKVLLGLSGGVDSSVVGVLLQKAIGDQLICIFVDHGLLRKGE---ADQVMDMLGGKFGLN 282

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             K    +  +  LA + D                ++  +     + +        +   
Sbjct: 283 IIKADAAKRFLDKLAGVSDPEQKRKIIGNEFVYVFDDEASKLKDVKFLAQGTLYTDVIES 342

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                                   TI++      L  +    +  PL  L K E   L  
Sbjct: 343 ------------------GTDTAQTIKSHHNVGGLPEDMQFELIEPLNTLYKDEVRALGT 384

Query: 186 DIGGQDLV 193
           ++G  D +
Sbjct: 385 ELGMPDEI 392


>gi|332296244|ref|YP_004438167.1| protein of unknown function DUF814 [Thermodesulfobium narugense
          DSM 14796]
 gi|332179347|gb|AEE15036.1| protein of unknown function DUF814 [Thermodesulfobium narugense
          DSM 14796]
          Length = 324

 Score = 41.4 bits (95), Expect = 0.096,   Method: Composition-based stats.
 Identities = 13/31 (41%), Positives = 15/31 (48%)

Query: 10 SALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
           ALLLFSGG DS        D+   V  + F
Sbjct: 3  RALLLFSGGLDSLVAGRIIQDQNIDVIPIKF 33


>gi|328946326|gb|EGG40470.1| GMP synthase [Streptococcus sanguinis SK1087]
          Length = 520

 Score = 41.4 bits (95), Expect = 0.096,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 50/188 (26%), Gaps = 24/188 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM--P 65
              LL  SGG DSS           D++  +  D+G   K E      V   +       
Sbjct: 226 KKVLLGLSGGVDSSVVGVLLQKAIGDQLICIFVDHGLLRKGE---ADQVMDMLGGKFGLN 282

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             K    +  +  LA + D                ++  +     + +        +   
Sbjct: 283 IIKADAAKRFLDKLAGVSDPEQKRKIIGNEFVYVFDDEASKLKDVKFLAQGTLYTDVIES 342

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                                   TI++      L  +    +  PL  L K E   L  
Sbjct: 343 ------------------GTDTAQTIKSHHNVGGLPEDMQFELIEPLNTLYKDEVRALGT 384

Query: 186 DIGGQDLV 193
           ++G  D +
Sbjct: 385 ELGMPDEI 392


>gi|327460370|gb|EGF06707.1| GMP synthase [Streptococcus sanguinis SK1057]
          Length = 520

 Score = 41.4 bits (95), Expect = 0.096,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 50/188 (26%), Gaps = 24/188 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM--P 65
              LL  SGG DSS           D++  +  D+G   K E      V   +       
Sbjct: 226 KKVLLGLSGGVDSSVVGVLLQKAIGDQLICIFVDHGLLRKGE---ADQVMDMLGGKFGLN 282

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             K    +  +  LA + D                ++  +     + +        +   
Sbjct: 283 IIKADAAKRFLDKLAGVSDPEQKRKIIGNEFVYVFDDEASKLKDVKFLAQGTLYTDVIES 342

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                                   TI++      L  +    +  PL  L K E   L  
Sbjct: 343 ------------------GTDTAQTIKSHHNVGGLPEDMQFELIEPLNTLYKDEVRALGT 384

Query: 186 DIGGQDLV 193
           ++G  D +
Sbjct: 385 ELGMPDEI 392


>gi|325696489|gb|EGD38379.1| GMP synthase [Streptococcus sanguinis SK160]
 gi|327462221|gb|EGF08548.1| GMP synthase [Streptococcus sanguinis SK1]
          Length = 520

 Score = 41.4 bits (95), Expect = 0.096,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 50/188 (26%), Gaps = 24/188 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM--P 65
              LL  SGG DSS           D++  +  D+G   K E      V   +       
Sbjct: 226 KKVLLGLSGGVDSSVVGVLLQKAIGDQLICIFVDHGLLRKGE---ADQVMDMLGGKFGLN 282

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             K    +  +  LA + D                ++  +     + +        +   
Sbjct: 283 IIKADAAKRFLDKLAGVSDPEQKRKIIGNEFVYVFDDEASKLKDVKFLAQGTLYTDVIES 342

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                                   TI++      L  +    +  PL  L K E   L  
Sbjct: 343 ------------------GTDTAQTIKSHHNVGGLPEDMQFELIEPLNTLYKDEVRALGT 384

Query: 186 DIGGQDLV 193
           ++G  D +
Sbjct: 385 ELGMPDEI 392


>gi|324994448|gb|EGC26361.1| GMP synthase [Streptococcus sanguinis SK678]
          Length = 520

 Score = 41.4 bits (95), Expect = 0.096,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 50/188 (26%), Gaps = 24/188 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM--P 65
              LL  SGG DSS           D++  +  D+G   K E      V   +       
Sbjct: 226 KKVLLGLSGGVDSSVVGVLLQKAIGDQLICIFVDHGLLRKGE---ADQVMDMLGGKFGLN 282

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             K    +  +  LA + D                ++  +     + +        +   
Sbjct: 283 IIKADAAKRFLDKLAGVSDPEQKRKIIGNEFVYVFDDEASKLKDVKFLAQGTLYTDVIES 342

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                                   TI++      L  +    +  PL  L K E   L  
Sbjct: 343 ------------------GTDTAQTIKSHHNVGGLPEDMQFELIEPLNTLYKDEVRALGT 384

Query: 186 DIGGQDLV 193
           ++G  D +
Sbjct: 385 ELGMPDEI 392


>gi|324992915|gb|EGC24835.1| GMP synthase [Streptococcus sanguinis SK405]
          Length = 520

 Score = 41.4 bits (95), Expect = 0.096,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 50/188 (26%), Gaps = 24/188 (12%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM--P 65
              LL  SGG DSS           D++  +  D+G   K E      V   +       
Sbjct: 226 KKVLLGLSGGVDSSVVGVLLQKAIGDQLICIFVDHGLLRKGE---ADQVMDMLGGKFGLN 282

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
             K    +  +  LA + D                ++  +     + +        +   
Sbjct: 283 IIKADAAKRFLDKLAGVSDPEQKRKIIGNEFVYVFDDEASKLKDVKFLAQGTLYTDVIES 342

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
                                   TI++      L  +    +  PL  L K E   L  
Sbjct: 343 ------------------GTDTAQTIKSHHNVGGLPEDMQFELIEPLNTLYKDEVRALGT 384

Query: 186 DIGGQDLV 193
           ++G  D +
Sbjct: 385 ELGMPDEI 392


>gi|319941220|ref|ZP_08015553.1| hypothetical protein HMPREF9464_00772 [Sutterella wadsworthensis
          3_1_45B]
 gi|319805295|gb|EFW02110.1| hypothetical protein HMPREF9464_00772 [Sutterella wadsworthensis
          3_1_45B]
          Length = 287

 Score = 41.4 bits (95), Expect = 0.096,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 17/49 (34%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
          + +SGG DS      A     RV  L     Q    E    L   +++ 
Sbjct: 27 VAYSGGLDSRFLSFCAKKLGFRVNLLHIIGPQIAPDETADALKDAEELG 75


>gi|253681327|ref|ZP_04862125.1| tRNA(Ile)-lysidine synthase [Clostridium botulinum D str. 1873]
 gi|253562565|gb|EES92016.1| tRNA(Ile)-lysidine synthase [Clostridium botulinum D str. 1873]
          Length = 462

 Score = 41.4 bits (95), Expect = 0.096,   Method: Composition-based stats.
 Identities = 15/129 (11%), Positives = 31/129 (24%), Gaps = 8/129 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR----FDRVETLSFDYGQRNKVELECRLCVR 57
           N++ +     ++  SGG DS   L             +     +    + +  E      
Sbjct: 12  NNMFEVGDKVVVAVSGGPDSICLLHILYKLREKIGISIVAAHIN----HCLRGEEADKDE 67

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           + + +                  I  D   S       ++    +     V    I    
Sbjct: 68  EYVRKFCENLNIQCFVKKEDVHKISKDRGISCEMAGREVRYDFFSEVLNNVRANKIAVAH 127

Query: 118 FAATLAYRL 126
            A   A  +
Sbjct: 128 NANDQAETI 136


>gi|168186413|ref|ZP_02621048.1| argininosuccinate synthase [Clostridium botulinum C str. Eklund]
 gi|169295536|gb|EDS77669.1| argininosuccinate synthase [Clostridium botulinum C str. Eklund]
          Length = 401

 Score = 41.4 bits (95), Expect = 0.096,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVR 57
               +L +SGG D+S  + W  + ++  V     + GQ    E   +  ++
Sbjct: 1  MKEKVVLAYSGGLDTSITIHWLKENYNLDVIACCVNVGQDEDFEEIKKKAIK 52


>gi|167835779|ref|ZP_02462662.1| sulfate adenylyltransferase subunit 2 [Burkholderia thailandensis
           MSMB43]
          Length = 321

 Score = 41.4 bits (95), Expect = 0.096,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 51/195 (26%), Gaps = 19/195 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF---------DRVETLSFDYGQRNKVELE 51
           + +++ +     LLFSGG+DS   L  AL  F              +  D G      ++
Sbjct: 35  LRELVAECSKPALLFSGGKDSVVVLHLALKAFGLGANRKTALPFPLVHIDTGHNYDEVID 94

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
            R    K+I          L   H+      G +     T +         L      G 
Sbjct: 95  FRDRRAKEIGA-------ELVVGHVEDSIARGTVVLRRETDSRNAAQAVTLLETIEQHGY 147

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
             +                I     E         R +        ++ G    V    P
Sbjct: 148 TAMIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHQGEHLRV---FP 204

Query: 172 LMWLKKYETWKLAQD 186
           +    + + W+    
Sbjct: 205 ISNWTELDVWQYVAR 219


>gi|167569149|ref|ZP_02362023.1| sulfate adenylyltransferase subunit 2 [Burkholderia oklahomensis
           C6786]
          Length = 321

 Score = 41.4 bits (95), Expect = 0.096,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 51/195 (26%), Gaps = 19/195 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF---------DRVETLSFDYGQRNKVELE 51
           + +++ +     LLFSGG+DS   L  AL  F              +  D G      ++
Sbjct: 35  LRELVAECSKPALLFSGGKDSVVVLHLALKAFGLGANRKTSLPFPLVHIDTGHNYDEVID 94

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
            R    K+I          L   H+      G +     T +         L      G 
Sbjct: 95  FRDRRAKEIGA-------ELVVGHVEDSIKRGTVVLRRETDSRNAAQAVTLLETIEAHGY 147

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
             +                I     E         R +        ++ G    V    P
Sbjct: 148 TAMIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWSLFNARLHRGEHLRV---FP 204

Query: 172 LMWLKKYETWKLAQD 186
           +    + + W+    
Sbjct: 205 ISNWTELDVWQYIAR 219


>gi|167561898|ref|ZP_02354814.1| sulfate adenylyltransferase subunit 2 [Burkholderia oklahomensis
           EO147]
          Length = 293

 Score = 41.4 bits (95), Expect = 0.096,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 51/195 (26%), Gaps = 19/195 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF---------DRVETLSFDYGQRNKVELE 51
           + +++ +     LLFSGG+DS   L  AL  F              +  D G      ++
Sbjct: 35  LRELVAECSKPALLFSGGKDSVVVLHLALKAFGLGANRRTSLPFPLVHIDTGHNYDEVID 94

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
            R    K+I          L   H+      G +     T +         L      G 
Sbjct: 95  FRDRRAKEIGA-------ELVVGHVEDSIKRGTVVLRRETDSRNAAQAVTLLETIEAHGY 147

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
             +                I     E         R +        ++ G    V    P
Sbjct: 148 TAMIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWSLFNARLHRGEHLRV---FP 204

Query: 172 LMWLKKYETWKLAQD 186
           +    + + W+    
Sbjct: 205 ISNWTELDVWQYIAR 219


>gi|158318129|ref|YP_001510637.1| sulfate adenylyltransferase subunit 2 [Frankia sp. EAN1pec]
 gi|158113534|gb|ABW15731.1| sulfate adenylyltransferase, small subunit [Frankia sp. EAN1pec]
          Length = 319

 Score = 41.4 bits (95), Expect = 0.096,   Method: Composition-based stats.
 Identities = 21/187 (11%), Positives = 57/187 (30%), Gaps = 8/187 (4%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVR 57
            + + ++   ++L+S G+DS+  L  A+  F         L  D   + +   + R    
Sbjct: 38  REAVAESERPVMLYSVGKDSTVLLHLAMKAFFPSRPPFPLLHVDTTWKFRAMYDFRDKAA 97

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
            ++   +  +++    +  +     G  +H+ + K   +K   +        G       
Sbjct: 98  AELGVDLLVYQNPECVERGINPFDHGSATHTDMWKTEGLKQALDLYGFDLAFGGARRDEE 157

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETA---INLGMESHVTVHTPLMW 174
            +        I +                 ++  +A   +     L   + + V    + 
Sbjct: 158 KSRAKERVFSIRSAQHRWDPKAQRPELWRLYNASKAPGQSVRVFPLSNWTELDVWQY-IH 216

Query: 175 LKKYETW 181
            +K    
Sbjct: 217 REKIPIV 223


>gi|157363475|ref|YP_001470242.1| ExsB family protein [Thermotoga lettingae TMO]
 gi|157314079|gb|ABV33178.1| ExsB family protein [Thermotoga lettingae TMO]
          Length = 313

 Score = 41.4 bits (95), Expect = 0.096,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 26/73 (35%), Gaps = 11/73 (15%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDR--VETLSFDYGQRNKVELECRLCVRKKIVELMP 65
          +   L+ FSGG+DS+     A        V  ++ D+G             RK + E+  
Sbjct: 10 SEKLLVAFSGGEDSTLVAYLAKQALGEKKVILVTVDWG------KFTYEKARKGVAEVSK 63

Query: 66 KWKDSLGEDHILP 78
              S    + + 
Sbjct: 64 LLGLS---HYFID 73


>gi|332527176|ref|ZP_08403249.1| GMP synthase [Rubrivivax benzoatilyticus JA2]
 gi|332111600|gb|EGJ11582.1| GMP synthase [Rubrivivax benzoatilyticus JA2]
          Length = 534

 Score = 41.4 bits (95), Expect = 0.097,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 56/186 (30%), Gaps = 19/186 (10%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +       +++  +  D+G               ++ E       
Sbjct: 225 VILGLSGGVDSSVAAALIHRAIGEQLTCVFVDHG-------------LLRLNEGDMVMDM 271

Query: 70  SLGEDH-ILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             G+ H  +      ++    L      + +   +   FV           A      G 
Sbjct: 272 FAGKLHARVIRVDASELFLGELAGVSDPEAKRKIIGRLFVDVFKAEAAKLKAGTEGHKGA 331

Query: 129 TNIVI---GVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
           T +          +  G    +  TI++      L  +  + +  PL  L K E  +L  
Sbjct: 332 TFLAQGTIYPDVIESGGAKTKKATTIKSHHNVGGLPEQLGLKLLEPLRDLFKDEVRELGV 391

Query: 186 DIGGQD 191
            +G   
Sbjct: 392 ALGLPH 397


>gi|324112401|gb|EGC06378.1| PP-loop family protein [Escherichia fergusonii B253]
          Length = 431

 Score = 41.4 bits (95), Expect = 0.097,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 20/48 (41%), Gaps = 5/48 (10%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCL-----SWALDRFDRVETLSFDYG 43
          +N  +  +   L+ FSGG DS+  L       A +    +  +   +G
Sbjct: 5  LNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRAENPGVTLRAIHVHHG 52


>gi|258513892|ref|YP_003190114.1| argininosuccinate synthase [Desulfotomaculum acetoxidans DSM 771]
 gi|257777597|gb|ACV61491.1| argininosuccinate synthase [Desulfotomaculum acetoxidans DSM 771]
          Length = 401

 Score = 41.4 bits (95), Expect = 0.097,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 2/80 (2%)

Query: 10 SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELM-PKW 67
            +L +SGG D+S  + W  +     V  ++ D GQ  ++E      V+    +L     
Sbjct: 3  KVVLAYSGGLDTSIIIPWLKENYGYEVIAMAADLGQGEELEPLHEKAVKSGASKLYIEDV 62

Query: 68 KDSLGEDHILPLAILGDISH 87
          +    E++I P    G I  
Sbjct: 63 RKEFVEEYIFPTLRAGAIYE 82


>gi|187933472|ref|YP_001884417.1| tRNA(Ile)-lysidine synthase [Clostridium botulinum B str. Eklund
           17B]
 gi|187721625|gb|ACD22846.1| tRNA(Ile)-lysidine synthase [Clostridium botulinum B str. Eklund
           17B]
          Length = 468

 Score = 41.4 bits (95), Expect = 0.097,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 53/193 (27%), Gaps = 18/193 (9%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           N++IK     L+  SGG DS   L+   +                  E          + 
Sbjct: 12  NNLIKSGDKILIALSGGPDSLCLLNMLKE----------------LREELDIEIGAAHLN 55

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
            L+        E+ ++      +I       ++    +++ L +                
Sbjct: 56  HLLRGDDAFKDEEFVINTCKEMNIPCYVKRVDINKYSKEHRLSSELAGRNVRYDFFDEIL 115

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
                G   I       D +     R      +E    + +     +  P++ L + E  
Sbjct: 116 KKE--GFNKIATAHNANDQAETIIFRMMRGTGLEGLGGIKVYRENKIIRPILCLTRTEVE 173

Query: 182 KLAQDIGGQDLVN 194
           K  ++      ++
Sbjct: 174 KYIEEKKLNPRID 186


>gi|126460252|ref|YP_001056530.1| PP-loop domain-containing protein [Pyrobaculum calidifontis JCM
           11548]
 gi|126249973|gb|ABO09064.1| PP-loop domain protein [Pyrobaculum calidifontis JCM 11548]
          Length = 327

 Score = 41.4 bits (95), Expect = 0.097,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 33/126 (26%), Gaps = 10/126 (7%)

Query: 13  LLFSGGQDSSTCLSWALD-------RFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           +  SGG+DS   L            R  R+E  + + G                + EL  
Sbjct: 55  VAVSGGKDSLVLLYILGKLRERGALRGVRLEAFTINEGHPYSCFYRMSRR--DYVRELAE 112

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
           K+       H   +  +  +  S      A         +  +  R +  +         
Sbjct: 113 KFGVEYNVYHFKDIFGVTAMELSERLAK-AGHEVHMCTIDGVLRRRAMNIIGKRRGWTKI 171

Query: 126 LGITNI 131
               N+
Sbjct: 172 ATAHNL 177


>gi|15839020|ref|NP_299708.1| GMP synthase [Xylella fastidiosa 9a5c]
 gi|13627140|sp|Q9PAR6|GUAA_XYLFA RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|9107620|gb|AAF85228.1|AE004052_3 glutamine amidotransferase [Xylella fastidiosa 9a5c]
          Length = 522

 Score = 41.4 bits (95), Expect = 0.097,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 50/182 (27%), Gaps = 18/182 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS   +        ++  +  D G     E +              +   
Sbjct: 227 VILGLSGGVDSSVVAALLQKAIGSQLTCVFVDTGLLRWGEGD--------------QVMA 272

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              E   + +  +   S            +        +  +           A  L   
Sbjct: 273 MFAEHMGVNVVRINAASRYFDALQGVYDPEAKRKIIGNLFIQIFEEEASKRKQAKWLAQG 332

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S     +   I++      L  +  + +  PL  L K E  +L   +G 
Sbjct: 333 TIYPDVIESAGS--KTGKAHVIKSHHNVGGLPEQMTLGMVEPLRELFKDEVRRLGVALGL 390

Query: 190 QD 191
             
Sbjct: 391 PH 392


>gi|103487012|ref|YP_616573.1| sulfate adenylyltransferase subunit 2 [Sphingopyxis alaskensis
           RB2256]
 gi|98977089|gb|ABF53240.1| sulfate adenylyltransferase subunit 2 [Sphingopyxis alaskensis
           RB2256]
          Length = 301

 Score = 41.4 bits (95), Expect = 0.097,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 47/191 (24%), Gaps = 16/191 (8%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCV 56
           M +++  A   ++L+S G+DS+  L  A   F         L  D   +           
Sbjct: 19  MREVMADAAKPVMLYSVGKDSAVMLHLARKAFYPSPPPFPLLHVDTTWK--------FRA 70

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
             ++ + M          H  P A    I+            +   L          +  
Sbjct: 71  MYELRDRMAAESGMELIVHQNPEAKARGINPFDHGPLHTDMWKTEGLKQALDLHGFDVAF 130

Query: 117 VFAATLAYRLGITN-IVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
             A     +      I      +        R +           G    V    P+   
Sbjct: 131 GGARRDEEKSRAKERIFSFRTASHGWDPKKQRPELWNLYNARKAKGESIRV---FPISNW 187

Query: 176 KKYETWKLAQD 186
            + + W+    
Sbjct: 188 TELDIWQYIAR 198


>gi|313677722|ref|YP_004055718.1| gmp synthase, large subunit [Marivirga tractuosa DSM 4126]
 gi|312944420|gb|ADR23610.1| GMP synthase, large subunit [Marivirga tractuosa DSM 4126]
          Length = 509

 Score = 41.4 bits (95), Expect = 0.098,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 18/55 (32%), Gaps = 1/55 (1%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
               +L  SGG DSS             +  +  D G   K E E  L   K + 
Sbjct: 213 NDKVVLGLSGGVDSSVAAMLIHHAIGKNLYCIFVDNGLLRKNEFEEVLESYKHMG 267


>gi|308274871|emb|CBX31470.1| hypothetical protein N47_E49820 [uncultured Desulfobacterium sp.]
          Length = 261

 Score = 41.4 bits (95), Expect = 0.098,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 74/237 (31%), Gaps = 18/237 (7%)

Query: 1   MNDIIKKAPSAL-LLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRL--CV 56
           MN         + LL++GG DS+  L    L    +V+       +R     E      +
Sbjct: 1   MNQ--NNNEKVIYLLWTGGWDSTFRLIHLVLVEKVKVQPYYIIEIERKSFLYELAAILKI 58

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
           R+KI+E  P     L    I   + + + S  +                 ++P       
Sbjct: 59  REKILEKDPISATLLLPTRIYLKSEIAECSPITKKFQSLSSRFRLGSQFEWLPRFAEQNQ 118

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
           +    LA               +Y G      + I  + T ++             ++  
Sbjct: 119 MKDIELAIEKNQMR--PRDPVFEYLGRFLIEDNGILKLATTLSDNDMQIFKYFHFPIY-S 175

Query: 177 KYETWKLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACYL-RQKGWM 232
           K +      +I  ++  + I+  S  C+  KR      G  C  C  C    ++G+ 
Sbjct: 176 KTKL--QMLEISLKEGFDDIMFNSWFCHRPKR------GQPCGQCHPCMDAMEEGFA 224


>gi|300902007|ref|ZP_07120034.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 84-1]
 gi|301305324|ref|ZP_07211420.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 124-1]
 gi|300405893|gb|EFJ89431.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 84-1]
 gi|300839429|gb|EFK67189.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 124-1]
 gi|315254990|gb|EFU34958.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 85-1]
          Length = 432

 Score = 41.4 bits (95), Expect = 0.098,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 18/49 (36%), Gaps = 5/49 (10%)

Query: 12 LLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYGQRNKVELECRLC 55
          L+ FSGG DS+  L   +          +  +   +G     +   R C
Sbjct: 16 LVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHGLSANADAWVRHC 64


>gi|269103266|ref|ZP_06155963.1| GMP synthase [glutamine-hydrolyzing] [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268163164|gb|EEZ41660.1| GMP synthase [glutamine-hydrolyzing] [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 504

 Score = 41.4 bits (95), Expect = 0.098,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 53/181 (29%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS           D++  +  D G     E E              +  D
Sbjct: 209 VILGLSGGVDSSVVAMLVHRAIGDKLTCVFVDNGLLRLNEGE--------------QVMD 254

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+   L +  +   +          + +        V              A  L   
Sbjct: 255 MFGDHFGLNIVHVKAENRFLEALAGVDEPEAKRKIIGRVFVEVFDEESKKLQNAKWLAQG 314

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S     +   I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 315 TIYPDVIESAAS--KTGKAHVIKSHHNVGGLPDDMQMGLVEPLKELFKDEVRKIGLELGL 372

Query: 190 Q 190
            
Sbjct: 373 P 373


>gi|269124156|ref|YP_003306733.1| GMP synthase, large subunit [Streptobacillus moniliformis DSM
           12112]
 gi|268315482|gb|ACZ01856.1| GMP synthase, large subunit [Streptobacillus moniliformis DSM
           12112]
          Length = 512

 Score = 41.4 bits (95), Expect = 0.098,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 49/186 (26%), Gaps = 15/186 (8%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS           D +  +  D G     E         ++ +     
Sbjct: 213 KKVMLGLSGGVDSSVAAVLINKAIGDNLICVFVDTGLLRYDE-------ANRVYDYYKSN 265

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
            +            L  +      +     I    +         +        LA    
Sbjct: 266 FNLNIVKVDAGDRFLSKLKGVDEPEAKRKIIGKEFVEVFNEEAAKLKGGKDVEFLAQGTI 325

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
             +++        S         I++      L  E    +  PL  L K E  ++ +++
Sbjct: 326 YPDVIESQAVEGVSHT-------IKSHHNVGGLPEEMTFKLLEPLRELFKDEVRQVGKEM 378

Query: 188 GGQDLV 193
           G  + +
Sbjct: 379 GMPESI 384


>gi|224110162|ref|XP_002315434.1| predicted protein [Populus trichocarpa]
 gi|222864474|gb|EEF01605.1| predicted protein [Populus trichocarpa]
          Length = 424

 Score = 41.4 bits (95), Expect = 0.098,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 56/214 (26%), Gaps = 11/214 (5%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           K    +L +SGG D+S  + W  +     V   + D GQ   V     L  + K      
Sbjct: 9   KLNKVVLAYSGGLDTSVIVPWLRENYGCEVVCFTADVGQ--GVGELEGLEQKAKASGACQ 66

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                L E+ +            +        +   ++    +    +         A  
Sbjct: 67  LVVKDLQEEFVRDFIF---PCLRAGAIYERKYLLGTSMARPVIAKAMVDVAKEVGADAVA 123

Query: 126 LGITNIVIG-VCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
            G T       C T+ S   + R              +   + V  P             
Sbjct: 124 HGCTGKGNDQACLTNRSNLTNTRAFPSSVRFELTFFALNPELNVVAPWREWD---ITGRE 180

Query: 185 QDIGGQDLVNLILEES-HTCYLGKRDKRYEWGYG 217
             I      N+ +  +  + Y   R+  +    G
Sbjct: 181 DAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEG 214


>gi|297201009|ref|ZP_06918406.1| sulfate adenylyltransferase subunit 2 [Streptomyces sviceus ATCC
           29083]
 gi|197712209|gb|EDY56243.1| sulfate adenylyltransferase subunit 2 [Streptomyces sviceus ATCC
           29083]
          Length = 311

 Score = 41.4 bits (95), Expect = 0.098,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 22/61 (36%), Gaps = 4/61 (6%)

Query: 12  LLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           ++LFSGG+DS   L  AL  F         L  D G      LE R     K    +   
Sbjct: 42  VILFSGGKDSIVMLHLALKAFAPAPIPFSLLHVDTGHNFPEVLEYRDRTVAKYGLRLHVA 101

Query: 68  K 68
            
Sbjct: 102 S 102


>gi|88607947|ref|YP_505762.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Anaplasma phagocytophilum HZ]
 gi|88599010|gb|ABD44480.1| GMP synthase [Anaplasma phagocytophilum HZ]
          Length = 529

 Score = 41.4 bits (95), Expect = 0.098,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 57/184 (30%), Gaps = 19/184 (10%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +   SGG DSS           D+++ +  D G   K E+E                ++
Sbjct: 227 VVAAISGGVDSSVASVLLHRAIGDQLKCVFVDTGLLRKGEVET--------------VRE 272

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              +   + ++I+             +  ++                      A  L   
Sbjct: 273 FFVDKLKMSVSIVSAAFLFIERLRGVVDPEEKRKIIGNTFIEVFEQEAKKLGDAQFLMQG 332

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  SG        I++      L    ++++  PL  L K E   L  ++G 
Sbjct: 333 TIYPDVIESGASGL----GVKIKSHHNVGGLPENMNLSLVEPLRCLFKDEVRALGSELGL 388

Query: 190 QDLV 193
            D++
Sbjct: 389 PDVI 392


>gi|330829938|ref|YP_004392890.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Aeromonas veronii B565]
 gi|328805074|gb|AEB50273.1| Bifunctional GMP synthase/glutamine amidotransferase protein
           [Aeromonas veronii B565]
          Length = 529

 Score = 41.4 bits (95), Expect = 0.098,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 51/181 (28%), Gaps = 17/181 (9%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +L  SGG DSS           DR+  +  D G     E E              +  +
Sbjct: 234 VILALSGGVDSSVVAMLVQRAIGDRLTCVFVDNGLLRLNEGE--------------QVME 279

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+   L +  +              + +        V              A  L   
Sbjct: 280 MFGDHFGLNIIKVEAEERFLSALAGVDEPEAKRKIIGRVFVEVFDDEAKKLKNAKWLAQG 339

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S     +   I++      L  E  + +  PL  L K E  ++  ++G 
Sbjct: 340 TIYPDVIESAAS--KTGKAHVIKSHHNVGGLPEEMKMGLVEPLRELFKDEVRRVGLELGL 397

Query: 190 Q 190
            
Sbjct: 398 P 398


>gi|327480171|gb|AEA83481.1| cell cycle protein mesJ, putative [Pseudomonas stutzeri DSM 4166]
          Length = 441

 Score = 41.4 bits (95), Expect = 0.098,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 24/69 (34%), Gaps = 9/69 (13%)

Query: 13  LLFSGGQDSSTCLSWALDRFDR------VETLSFDYGQRNKVELECRL--CVRKKIVELM 64
           + FSGG DS+  L  AL R         +  +   +G +   +        V  ++   +
Sbjct: 34  VAFSGGLDSTVLLH-ALTRLSERQALPVIRAIHVHHGLQAAGDHWPAHCQRVCDQLGVTL 92

Query: 65  PKWKDSLGE 73
              +  +  
Sbjct: 93  EIVRVRVVP 101


>gi|296104181|ref|YP_003614327.1| GMP synthase (glutamine-hydrolyzing) [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295058640|gb|ADF63378.1| GMP synthase (glutamine-hydrolyzing) [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 525

 Score = 41.4 bits (95), Expect = 0.098,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 46/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG---LLRLNEAQQVMDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G     +  K +     +                           
Sbjct: 285 IVHVEGEQRFLDALAGVNDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLRELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|256376178|ref|YP_003099838.1| argininosuccinate synthase [Actinosynnema mirum DSM 43827]
 gi|255920481|gb|ACU35992.1| argininosuccinate synthase [Actinosynnema mirum DSM 43827]
          Length = 481

 Score = 41.4 bits (95), Expect = 0.098,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 25/57 (43%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  ++W  ++     T + D GQ ++ ++             + +  D
Sbjct: 16 IAFSGGLDTSVAVAWMREKGAVPCTYTADIGQYDEPDIASVPGRAAAYGAELARLVD 72


>gi|225028631|ref|ZP_03717823.1| hypothetical protein EUBHAL_02910 [Eubacterium hallii DSM 3353]
 gi|224954041|gb|EEG35250.1| hypothetical protein EUBHAL_02910 [Eubacterium hallii DSM 3353]
          Length = 241

 Score = 41.4 bits (95), Expect = 0.098,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 29/76 (38%), Gaps = 7/76 (9%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWA--LDRFD----RVETLSFDYGQRNKVELECRLCVR 57
          +IK+     +  SGG+DS T L     L  F      +  ++ D G  N    E R    
Sbjct: 19 MIKENDKIAVGISGGKDSLTLLYALSYLRNFYPHKFDIVAVTVDLGFDNLNLEEIRE-FC 77

Query: 58 KKIVELMPKWKDSLGE 73
          KK+       K  + E
Sbjct: 78 KKLGVEYQIIKTQIAE 93


>gi|218885978|ref|YP_002435299.1| thiamine biosynthesis protein [Desulfovibrio vulgaris str.
          'Miyazaki F']
 gi|218756932|gb|ACL07831.1| thiamine biosynthesis protein [Desulfovibrio vulgaris str.
          'Miyazaki F']
          Length = 368

 Score = 41.4 bits (95), Expect = 0.098,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
          + +K   A+ L SGG DS   +    ++   V+ L F
Sbjct: 1  MERKRYDAVALLSGGLDSILAVKVIEEQGLAVKCLHF 37


>gi|167569872|ref|ZP_02362746.1| argininosuccinate synthase [Burkholderia oklahomensis C6786]
          Length = 404

 Score = 41.4 bits (95), Expect = 0.098,   Method: Composition-based stats.
 Identities = 21/164 (12%), Positives = 38/164 (23%), Gaps = 2/164 (1%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL-M 64
           K    LL +SGG D+ST L +    F  RV     + GQ+   E   R        EL +
Sbjct: 2   KPKHILLAYSGGLDTSTALHFLKRHFDCRVTAYCANLGQKEDWERMKRRAAIAGADELII 61

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +++   D + P                 +              ++ +  +       
Sbjct: 62  EDLRETFIGDFVFPALKANASYERDYLLGTPLARPAIVKGLIEYARKHDVDCLSHGCTQK 121

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV 168
                   +                                  +
Sbjct: 122 GNDQVRFEMAAKILAPDLPTVAPWRIWSLQSREDLFAYCQQHDI 165


>gi|167562689|ref|ZP_02355605.1| argininosuccinate synthase [Burkholderia oklahomensis EO147]
          Length = 404

 Score = 41.4 bits (95), Expect = 0.098,   Method: Composition-based stats.
 Identities = 21/164 (12%), Positives = 38/164 (23%), Gaps = 2/164 (1%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVEL-M 64
           K    LL +SGG D+ST L +    F  RV     + GQ+   E   R        EL +
Sbjct: 2   KPKHILLAYSGGLDTSTALHFLKRHFDCRVTAYCANLGQKEDWERMKRRAAIAGADELII 61

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
              +++   D + P                 +              ++ +  +       
Sbjct: 62  EDLRETFIGDFVFPALKANASYERDYLLGTPLARPAIVKGLIEYARKHDVDCLSHGCTQK 121

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTV 168
                   +                                  +
Sbjct: 122 GNDQVRFEMAAKILAPDLPTVAPWRIWSLQSREDLFAYCQQHDI 165


>gi|134045948|ref|YP_001097434.1| putative ATP binding-like protein [Methanococcus maripaludis C5]
 gi|132663573|gb|ABO35219.1| putative ATP binding related protein [Methanococcus maripaludis C5]
          Length = 291

 Score = 41.4 bits (95), Expect = 0.098,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 41/168 (24%), Gaps = 1/168 (0%)

Query: 11  ALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            +L FSGG+DS   L   +     R   ++ D G   +  L     + K           
Sbjct: 69  CILGFSGGKDSVVALYLLVKELRIRPLCVTVDNGYLAEEALTNCKNIAKYFGVDWLVINK 128

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
              +     ++            N+    Q     N                +       
Sbjct: 129 DFTKFFKETISKGESPCRVCSDMNMHEIWQFARQTNIDTIVTGHELPFGTTAIREMKKGI 188

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
           N++  +     +             E     G  ++  V  P +   K
Sbjct: 189 NMLRLLVAYKLTEEDRYNILKEIPWEKPDLGGYTTNCLVLAPALVEFK 236


>gi|70728575|ref|YP_258324.1| tRNA(Ile)-lysidine synthetase [Pseudomonas fluorescens Pf-5]
 gi|68342874|gb|AAY90480.1| tRNA(Ile)-lysidine synthetase [Pseudomonas fluorescens Pf-5]
          Length = 438

 Score = 41.4 bits (95), Expect = 0.098,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 17/50 (34%), Gaps = 5/50 (10%)

Query: 13 LLFSGGQDSSTCLSWAL-----DRFDRVETLSFDYGQRNKVELECRLCVR 57
          + FSGG DS+  L          R   +  +   +G +   +     C  
Sbjct: 23 VAFSGGLDSTVLLHLLAGLAQHHRLPPLSAVHIHHGLQAAADAWPEHCQA 72


>gi|332978445|gb|EGK15160.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Psychrobacter sp. 1501(2011)]
          Length = 406

 Score = 41.4 bits (95), Expect = 0.099,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 45/188 (23%), Gaps = 9/188 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
             ++  SGG DSS           +VE L     + +     C     + + +       
Sbjct: 29  RVVVGMSGGVDSSVSAVLLQKAGFQVEGLFMKNWEEDDGTEYC--TAMEDLADAQAVCDK 86

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLA--YRLG 127
                H    A         + ++   + Q    PN  +     I        A   + G
Sbjct: 87  LGITLHT---ANFAMEYWDRVFEHFLAEYQAGRTPNPDILCNKEIKFKAFLDYASDPKFG 143

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           +    I             R D          L      +     +   K    K    +
Sbjct: 144 LGADYIATGHYTRRSINYTREDGTEVARLLRGLDNNKDQSYFLHAVGGDK--IAKTLFPV 201

Query: 188 GGQDLVNL 195
           G  +   +
Sbjct: 202 GELEKPEV 209


>gi|329849969|ref|ZP_08264815.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
           [Asticcacaulis biprosthecum C19]
 gi|328841880|gb|EGF91450.1| tRNA 5-methylaminomethyl-2-thiouridylate-methyltransferase
           [Asticcacaulis biprosthecum C19]
          Length = 395

 Score = 41.4 bits (95), Expect = 0.099,   Method: Composition-based stats.
 Identities = 21/182 (11%), Positives = 46/182 (25%), Gaps = 3/182 (1%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFDRVETLSFD-YGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DS+   +        V  ++   Y     ++     C  + I +     +
Sbjct: 32  RIVAAMSGGVDSTVVAALLAAAGYEVIGVTLQLYDHGAALKKTGACCAGQDIHDARMASE 91

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL--AYRL 126
                 ++L               +  ++ +                L+  A    A  +
Sbjct: 92  KIGIPHYVLDYESRFRDQVIEEFADSYLRGETPVPCIRCNQSVKFNDLLQVARDLGAEAM 151

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
              + V    E            +            E    +  PL  + K +   +A  
Sbjct: 152 ATGHYVERSDEDGVVSLRRAADQSRDQSYFLFATTREQLDYLRFPLAGIPKPQVRDIAVQ 211

Query: 187 IG 188
           +G
Sbjct: 212 LG 213


>gi|328957417|ref|YP_004374803.1| argininosuccinate synthase [Carnobacterium sp. 17-4]
 gi|328673741|gb|AEB29787.1| argininosuccinate synthase [Carnobacterium sp. 17-4]
          Length = 404

 Score = 41.4 bits (95), Expect = 0.099,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 58/211 (27%), Gaps = 21/211 (9%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
                +L +SGG D+S  + W +D    V     D G     E +    ++ K +E+   
Sbjct: 2   NKGKVVLAYSGGLDTSVSIKWLMDEGYDVIACCLDVG-----EGKNLDFIKDKAIEIGA- 55

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 +           I+  + T         + L    +  + +   +    +A   
Sbjct: 56  VASYTIDAKDEFANDFALIALQAHTYYEGKYPLISALSRPLIAKKLVEVAIKEEAVAVAH 115

Query: 127 GITNIVIGVCETDYSGY----------PDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
           G T         + + +          P       R  E    +     V +     +  
Sbjct: 116 GCTGKGNDQVRFEVAIHSLAPDLKVLAPVRDWTWSREEEINYAIEHSIPVPIDLDNPFSI 175

Query: 177 KYETWKLAQDIGGQDL-----VNLILEESHT 202
               W  + + G  +        +  + + +
Sbjct: 176 DQNLWGRSNECGVLENPWIAPPEVAYDLTVS 206


>gi|315133237|emb|CBY79957.1| LPS biosynthesis protein [Legionella pneumophila subsp. pneumophila
           ATCC 43290]
          Length = 388

 Score = 41.4 bits (95), Expect = 0.099,   Method: Composition-based stats.
 Identities = 20/148 (13%), Positives = 47/148 (31%), Gaps = 20/148 (13%)

Query: 11  ALLLFSGGQDSS-TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            ++ FSGG+DS+ T L    +   +   + F++G   +   +      K++         
Sbjct: 61  CIIPFSGGKDSTFTLLYLMREYKIKPLVVQFNHGFMREKLKQNNERTFKQLG-------- 112

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                  + +              +   I+  +         +     +   +A +    
Sbjct: 113 -------VDVLSFTPNWKIVKRLMLESLIRKGDFCWH----CHTGIFSYPMQVAIKYNTP 161

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETA 157
            I  G   ++Y+ Y D R + I  +   
Sbjct: 162 LIFWGEPSSEYTAYYDYRDNEIEEVNEE 189


>gi|262192149|ref|ZP_06050310.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae CT 5369-93]
 gi|262031998|gb|EEY50575.1| tRNA(Ile)-lysidine synthetase [Vibrio cholerae CT 5369-93]
          Length = 440

 Score = 41.4 bits (95), Expect = 0.099,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 17/52 (32%), Gaps = 4/52 (7%)

Query: 10 SALLLFSGGQDSSTCLSWALDR----FDRVETLSFDYGQRNKVELECRLCVR 57
            LL  SGG DS   L+            V  +   +G     +   + C R
Sbjct: 19 KLLLALSGGVDSQVLLALLARGRDEFGWDVTAVHVHHGLSPNADQWAQHCQR 70


>gi|156937430|ref|YP_001435226.1| GMP synthase (glutamine-hydrolyzing) [Ignicoccus hospitalis
          KIN4/I]
 gi|156566414|gb|ABU81819.1| GMP synthase (glutamine-hydrolyzing) [Ignicoccus hospitalis
          KIN4/I]
          Length = 370

 Score = 41.4 bits (95), Expect = 0.099,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRF--DRVETLSFDYGQRNKVELECRLCVRKKI 60
              L   SGG DS+T  + A      ++++ +  D G   K E E    V + +
Sbjct: 21 KEKVLAAVSGGVDSTTAAALAYKALGPEQIKVIFIDTGFMRKGEPEWVKNVLRDV 75


>gi|89900146|ref|YP_522617.1| tRNA(Ile)-lysidine synthetase-like protein [Rhodoferax
          ferrireducens T118]
 gi|89344883|gb|ABD69086.1| tRNA(Ile)-lysidine synthetase-like [Rhodoferax ferrireducens
          T118]
          Length = 320

 Score = 41.4 bits (95), Expect = 0.099,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 13 LLFSGGQDSST-CLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
          + FSGG DS+   L+ A     +V  +   +G +   +   R C    +   +P     +
Sbjct: 20 VAFSGGADSTALLLACAEKWPGQVHAIHIHHGVQAAGDDFERHCQAVCVRLGLPLVVKRV 79

Query: 72 GEDH 75
             H
Sbjct: 80 DARH 83


>gi|331005662|ref|ZP_08329029.1| GMP synthase (glutamine-hydrolyzing) [gamma proteobacterium
           IMCC1989]
 gi|330420520|gb|EGG94819.1| GMP synthase (glutamine-hydrolyzing) [gamma proteobacterium
           IMCC1989]
          Length = 524

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 53/182 (29%), Gaps = 20/182 (10%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPKWK 68
           +LL  SGG DSS   +       D++  +  D G  R     +      + +   + +  
Sbjct: 229 VLLGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRKNEGDQVMSMFAENMGVKVIRVD 288

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                   L L+ L  +S   L +                    + +L            
Sbjct: 289 AE-----ELFLSKLAGVSDPELKRKAIGNTFIEIFDEESSKLNGVNWLAQGTIY------ 337

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
                     + +     +   I++      L  +  + +  PL  L K E  K+  ++G
Sbjct: 338 ------PDVIESAASKTGKAHVIKSHHNVGGLPDDMKMELVEPLRELFKDEVRKIGLELG 391

Query: 189 GQ 190
             
Sbjct: 392 LP 393


>gi|260891384|ref|ZP_05902647.1| sulfate adenylate transferase, subunit 2 [Leptotrichia hofstadii
           F0254]
 gi|260858767|gb|EEX73267.1| sulfate adenylate transferase, subunit 2 [Leptotrichia hofstadii
           F0254]
          Length = 314

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 56/179 (31%), Gaps = 16/179 (8%)

Query: 12  LLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIV-ELMPK 66
           ++L+S G+DSS  L  A+  F         L  + G + K  +  R    K++  E++  
Sbjct: 29  VMLYSIGKDSSVMLHLAMKAFYPEKPPFPFLHVNTGWKFKEMINFRDRRAKELGIEIIEY 88

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 E +I P       +    T+ +   +        F  GR               
Sbjct: 89  INPEGVEKNINPFDHGASFTDIMKTQALKQALNKYGFTAAFGGGRRD--------EEKSR 140

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
               I             + R +  +   T I+ G    V    P+    + + W+  Q
Sbjct: 141 AKERIFSFRNAAQAWDPKNQRPEMWKLYNTEISKGESIRV---FPISNWTEKDIWEYIQ 196


>gi|220903573|ref|YP_002478885.1| thiamine biosynthesis protein [Desulfovibrio desulfuricans subsp.
          desulfuricans str. ATCC 27774]
 gi|219867872|gb|ACL48207.1| thiamine biosynthesis protein [Desulfovibrio desulfuricans subsp.
          desulfuricans str. ATCC 27774]
          Length = 376

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 13/33 (39%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
           P  + LFSGG DS         +   V  L F
Sbjct: 3  TPDIIALFSGGLDSILAAKVLERQGLAVRCLHF 35


>gi|154492510|ref|ZP_02032136.1| hypothetical protein PARMER_02144 [Parabacteroides merdae ATCC
           43184]
 gi|154087735|gb|EDN86780.1| hypothetical protein PARMER_02144 [Parabacteroides merdae ATCC
           43184]
          Length = 397

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 45/187 (24%), Gaps = 14/187 (7%)

Query: 13  LLFSGGQDSSTCLSWALD--------RFDR----VETLSFDYGQRNKVELECRLCVRKKI 60
           +L SGG DSS   + A                   +  SF  G +   +L     V   I
Sbjct: 75  VLLSGGLDSSITSAIAKKYAAKRIETEGKADAWWPQLHSFAVGLKGAPDLVAAKKVADYI 134

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  +      E+ +  +  +     +     V        L          + L    
Sbjct: 135 GTVHHEIN-YTIEEGLDAIRDVIYYIETYDVTTVRASTPMYLLARVIKSMGIKMVLSGEG 193

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
                 G            +      +   +   +            V   + +L K E 
Sbjct: 194 ADEVFGGYLYFHKAPDAKAFHEETVRKLSKLYMYDCLRANKSLCAWGVEGRVPFLDK-EF 252

Query: 181 WKLAQDI 187
             +A  +
Sbjct: 253 LDIAMRL 259


>gi|121998294|ref|YP_001003081.1| asparagine synthase [Halorhodospira halophila SL1]
 gi|121589699|gb|ABM62279.1| asparagine synthase (glutamine-hydrolyzing) [Halorhodospira
           halophila SL1]
          Length = 637

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 24/69 (34%), Gaps = 1/69 (1%)

Query: 15  FSGGQDSSTCLSWALDRFDR-VETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLGE 73
            SGG DSS  ++   +  DR V+  S  +   +  E E    V   +       K     
Sbjct: 269 LSGGVDSSVVVALMSELSDRPVDACSIAFRDPHYDEAEHAGKVAGHLGLNHHIHKVDSER 328

Query: 74  DHILPLAIL 82
             ++    L
Sbjct: 329 FDLIDELAL 337


>gi|312144293|ref|YP_003995739.1| tRNA(Ile)-lysidine synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904944|gb|ADQ15385.1| tRNA(Ile)-lysidine synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 472

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 56/189 (29%), Gaps = 24/189 (12%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCL---SWALDRF-DRVETLSFDYGQRNKVELECRLCVR 57
           N+++ K    LL  SGG DS T L       D F   +  +  D+  R +   E      
Sbjct: 14  NNLLSKGDKILLAVSGGPDSLTMLQLFFEFKDYFAVDIALIHLDHQFRKESGQE-----L 68

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
             + E       +     +     L +I  +      A   ++       +  +N   L 
Sbjct: 69  DFVEEKAKDLNINFYTKKV----NLPEIIKNENISAEAAARRERFNFFKEIYLKNDFDL- 123

Query: 118 FAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
               LA+        + +     SG         +             V V  PL+   K
Sbjct: 124 --LALAHHKDDQAETVLLNLFRGSGLRGLSGIEKKINING--------VQVIHPLLDFSK 173

Query: 178 YETWKLAQD 186
            E  K  Q+
Sbjct: 174 KEIIKYCQE 182


>gi|296387857|ref|ZP_06877332.1| putative cell cycle protein [Pseudomonas aeruginosa PAb1]
          Length = 442

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 17/50 (34%), Gaps = 5/50 (10%)

Query: 13 LLFSGGQDSSTCLSWAL-----DRFDRVETLSFDYGQRNKVELECRLCVR 57
          + FSGG DS+  L         +    +  L   +G +   +     C  
Sbjct: 25 VAFSGGLDSTVLLHLLAQLARSEALPALSALHVHHGLQAAADGWPAHCQA 74


>gi|294785222|ref|ZP_06750510.1| NAD+ synthetase [Fusobacterium sp. 3_1_27]
 gi|294486936|gb|EFG34298.1| NAD+ synthetase [Fusobacterium sp. 3_1_27]
          Length = 258

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 19/60 (31%), Gaps = 2/60 (3%)

Query: 10 SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           A+L  SGG DS+       D    + V  +   Y   N   L     V + +       
Sbjct: 30 KAVLGLSGGIDSALVAYLLRDALGKENVLAIMMPYKSSNPDSLNHAKLVVEDLKINAKTI 89


>gi|262402667|ref|ZP_06079228.1| asparagine synthetase [glutamine-hydrolyzing] [Vibrio sp. RC586]
 gi|262351449|gb|EEZ00582.1| asparagine synthetase [glutamine-hydrolyzing] [Vibrio sp. RC586]
          Length = 554

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 52/193 (26%), Gaps = 14/193 (7%)

Query: 13  LLFSGGQDSSTCLSWALD------RFDRVETL------SFDYGQRNKVELECRLCVRKKI 60
           +L SGG DSS   + A          D           SF  G     +L+    V +KI
Sbjct: 232 VLLSGGLDSSITSAIAKRYAALRIEDDEKTAAWWPQLHSFAIGLEGAPDLKAAREVAEKI 291

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
             +  +      ++ +  +  +     +     +        +          + L    
Sbjct: 292 GTVHHEMT-YTIQEGLDAIRDVIYHIETYDVTTIRASTPMFLMGRKIKAMGIKMVLSGEG 350

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
                 G           ++      +   +   + A      +   V   + +L K E 
Sbjct: 351 ADEIFGGYLYFHKAPNAKEFHEETVRKLLALNLFDCARANKSLAAWGVEGRVPFLDK-EF 409

Query: 181 WKLAQDIGGQDLV 193
             +A  +   D +
Sbjct: 410 IDVAMRLNPADKM 422


>gi|256845472|ref|ZP_05550930.1| NAD+ synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256719031|gb|EEU32586.1| NAD+ synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 258

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 19/60 (31%), Gaps = 2/60 (3%)

Query: 10 SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           A+L  SGG DS+       D    + V  +   Y   N   L     V + +       
Sbjct: 30 KAVLGLSGGIDSALVAYLLRDALGKENVLAIMMPYKSSNPDSLNHAKLVVEDLKINAKTI 89


>gi|296109121|ref|YP_003616070.1| phosphoadenosine phosphosulfate reductase [Methanocaldococcus
           infernus ME]
 gi|295433935|gb|ADG13106.1| phosphoadenosine phosphosulfate reductase [Methanocaldococcus
           infernus ME]
          Length = 455

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 54/188 (28%), Gaps = 7/188 (3%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
           N   K     ++ +SGG+DS T L   L   +  E +  D G      L+    V+ K  
Sbjct: 234 NTAKKINKKIIVPYSGGKDSLTTLILCLKALENFEVIFIDTGLEFPETLKNVEEVKNKFN 293

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
             +   K  L    ++    +    +   ++ + +K     +    +    +      + 
Sbjct: 294 LDIKVLKPKLSFWELVEKYGIPGRDYRWCSEELKLKPLKEYVKEEVLSFLGLRKYESYSR 353

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTI-------RAIETAINLGMESHVTVHTPLMW 174
              +L   N  I      Y  +                        G +       P M 
Sbjct: 354 AKKKLIEKNTYIEKQINAYPIFHWSSLHVWLFLLKEKAPYNKLYEKGFDRIGCYLCPAMG 413

Query: 175 LKKYETWK 182
           L + E  K
Sbjct: 414 LGEIERVK 421


>gi|256811268|ref|YP_003128637.1| Queuosine synthesis-like protein [Methanocaldococcus fervens
          AG86]
 gi|256794468|gb|ACV25137.1| Queuosine synthesis-like protein [Methanocaldococcus fervens
          AG86]
          Length = 260

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
          I K P A++ FSGG DSST    A  +   V+ +S 
Sbjct: 59 IDKKPDAVVAFSGGVDSSTSTIIA-KQIFNVKAVSC 93


>gi|229824268|ref|ZP_04450337.1| hypothetical protein GCWU000282_01572 [Catonella morbi ATCC 51271]
 gi|229786241|gb|EEP22355.1| hypothetical protein GCWU000282_01572 [Catonella morbi ATCC 51271]
          Length = 516

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 58/185 (31%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS           D++  +  D+G                   L+ K +
Sbjct: 223 KVLLGLSGGVDSSVVGVLLQKAIGDQLTCIFVDHG-------------------LLRKGE 263

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
                D +     L  I  ++  + ++     ++         N    VF    A   G+
Sbjct: 264 GDQVMDSLAGKFGLNIIRVNAKDRFLSKLAGVSDPEQKRKIIGNEFVYVFDDEAAKLEGV 323

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G   TD         +TI++      L  +    +  PL  L K E   L   +G
Sbjct: 324 DFLAQGTLYTDIIESGTKTAETIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRALGTALG 383

Query: 189 GQDLV 193
             D +
Sbjct: 384 MPDSL 388


>gi|220934352|ref|YP_002513251.1| tRNA(Ile)-lysidine synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995662|gb|ACL72264.1| tRNA(Ile)-lysidine synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 419

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 22/62 (35%), Gaps = 6/62 (9%)

Query: 12 LLLFSGGQDSSTCLSWALD-RFD---RVETLSFDYG--QRNKVELECRLCVRKKIVELMP 65
          ++ FSGG DS   L  A   R      +  +   +G   R    +E    V + +   + 
Sbjct: 22 IVAFSGGLDSHVLLHAAAALRGVGFPELRAIHVHHGLNPRADAWVEHCGQVCEDLGVELR 81

Query: 66 KW 67
            
Sbjct: 82 VI 83


>gi|15598834|ref|NP_252328.1| hypothetical protein PA3638 [Pseudomonas aeruginosa PAO1]
 gi|61216741|sp|Q9HXZ3|TILS_PSEAE RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
          Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
          Full=tRNA(Ile)-lysidine synthetase
 gi|9949797|gb|AAG07026.1|AE004783_11 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
          Length = 442

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 17/50 (34%), Gaps = 5/50 (10%)

Query: 13 LLFSGGQDSSTCLSWAL-----DRFDRVETLSFDYGQRNKVELECRLCVR 57
          + FSGG DS+  L         +    +  L   +G +   +     C  
Sbjct: 25 VAFSGGLDSTVLLHLLAQLARSEALPALSALHVHHGLQAAADGWPAHCQA 74


>gi|254242336|ref|ZP_04935658.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|126195714|gb|EAZ59777.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
          Length = 442

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 17/50 (34%), Gaps = 5/50 (10%)

Query: 13 LLFSGGQDSSTCLSWAL-----DRFDRVETLSFDYGQRNKVELECRLCVR 57
          + FSGG DS+  L         +    +  L   +G +   +     C  
Sbjct: 25 VAFSGGLDSTVLLHLLAQLARSEALPALSALHVHHGLQAAADGWPAHCQA 74


>gi|116051635|ref|YP_789526.1| hypothetical protein PA14_17280 [Pseudomonas aeruginosa
          UCBPP-PA14]
 gi|115586856|gb|ABJ12871.1| putative cell cycle protein [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 442

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 17/50 (34%), Gaps = 5/50 (10%)

Query: 13 LLFSGGQDSSTCLSWAL-----DRFDRVETLSFDYGQRNKVELECRLCVR 57
          + FSGG DS+  L         +    +  L   +G +   +     C  
Sbjct: 25 VAFSGGLDSTVLLHLLAQLARSEALPALSALHVHHGLQAAADGWPAHCQA 74


>gi|34764278|ref|ZP_00145121.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium nucleatum subsp.
          vincentii ATCC 49256]
 gi|27885949|gb|EAA23282.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium nucleatum subsp.
          vincentii ATCC 49256]
          Length = 258

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 19/60 (31%), Gaps = 2/60 (3%)

Query: 10 SALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
           A+L  SGG DS+       D    + V  +   Y   N   L     V + +       
Sbjct: 30 KAVLGLSGGIDSALVAYLLRDALGKENVLAIMMPYKSSNPDSLNHAKLVVEDLKINAKTI 89


>gi|333011028|gb|EGK30447.1| tRNA(Ile)-lysidine synthase [Shigella flexneri K-272]
 gi|333021823|gb|EGK41072.1| tRNA(Ile)-lysidine synthase [Shigella flexneri K-227]
          Length = 432

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 5/48 (10%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYG 43
          +N  +  +   L+ FSGG DS+  L   +          +  +   +G
Sbjct: 5  LNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHG 52


>gi|330997932|ref|ZP_08321766.1| tRNA(Ile)-lysidine synthetase [Paraprevotella xylaniphila YIT
          11841]
 gi|329569536|gb|EGG51306.1| tRNA(Ile)-lysidine synthetase [Paraprevotella xylaniphila YIT
          11841]
          Length = 450

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 16/52 (30%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRK 58
               L+  SGG DS   L          E +  ++  R +        VR 
Sbjct: 23 PDDKILVALSGGADSVALLLVLQQAGFHCEAVHCNFHLRGEESDRDEKFVRD 74


>gi|323190412|gb|EFZ75687.1| tRNA(Ile)-lysidine synthase [Escherichia coli RN587/1]
          Length = 432

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 5/48 (10%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYG 43
          +N  +  +   L+ FSGG DS+  L   +          +  +   +G
Sbjct: 5  LNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHG 52


>gi|320173331|gb|EFW48534.1| tRNA(Ile)-lysidine synthetase [Shigella dysenteriae CDC 74-1112]
          Length = 432

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 5/48 (10%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYG 43
          +N  +  +   L+ FSGG DS+  L   +          +  +   +G
Sbjct: 5  LNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHG 52


>gi|317121384|ref|YP_004101387.1| argininosuccinate synthase [Thermaerobacter marianensis DSM
          12885]
 gi|315591364|gb|ADU50660.1| argininosuccinate synthase [Thermaerobacter marianensis DSM
          12885]
          Length = 437

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYG 43
           A   +L +SGG D+S  + W  +     V  LS D G
Sbjct: 1  MAEKIVLAYSGGLDTSVAIPWLKETYGYDVIALSADVG 38


>gi|323345484|ref|ZP_08085707.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
          [Prevotella oralis ATCC 33269]
 gi|323093598|gb|EFZ36176.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
          [Prevotella oralis ATCC 33269]
          Length = 444

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 26/66 (39%), Gaps = 3/66 (4%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR---NKVELECRLCVRKKI 60
          ++ K    ++  SGG DS   L         ++    ++  R   ++ + E  + + K+ 
Sbjct: 17 LLSKDSKYVVALSGGADSVALLLTLKRLGYVIDAAHCNFHLRGEESQRDEEFCISLCKRE 76

Query: 61 VELMPK 66
             + +
Sbjct: 77 NIRLHR 82


>gi|313902361|ref|ZP_07835765.1| argininosuccinate synthase [Thermaerobacter subterraneus DSM
          13965]
 gi|313467409|gb|EFR62919.1| argininosuccinate synthase [Thermaerobacter subterraneus DSM
          13965]
          Length = 419

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALD-RFDRVETLSFDYG 43
           A   +L +SGG D+S  + W  +     V  LS D G
Sbjct: 1  MAEKIVLAYSGGLDTSVAIPWLKETYGYDVIALSADVG 38


>gi|302387619|ref|YP_003823441.1| argininosuccinate synthase [Clostridium saccharolyticum WM1]
 gi|302198247|gb|ADL05818.1| argininosuccinate synthase [Clostridium saccharolyticum WM1]
          Length = 408

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 60/212 (28%), Gaps = 23/212 (10%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
                +L +SGG D++  + W  + F   V     D GQ N+++         K+     
Sbjct: 1   MKEKVILAYSGGLDTTAIIPWLKEHFDYEVVCCCIDCGQGNELDGLEERA---KLSGASK 57

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
            + + L +D      +       +        +   ++    +  R +         A  
Sbjct: 58  LYIEDLVDDFCDNYIV---PCVLANAVYENKYLLGTSMARPAIAKRLVEIARKEGATAIC 114

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
            G T         +          TI A     ++                + +  +  +
Sbjct: 115 HGATGKGNDQIRFELGIKALAPDLTIIAPWRMTDV-----------WTMKSREDEIEYCK 163

Query: 186 DIGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
             G    ++L     ++ Y   R+  +    G
Sbjct: 164 QHG----IDLPFSADNS-YSRDRNLWHISHEG 190


>gi|301330010|ref|ZP_07222697.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 78-1]
 gi|300843964|gb|EFK71724.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 78-1]
          Length = 432

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 5/48 (10%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYG 43
          +N  +  +   L+ FSGG DS+  L   +          +  +   +G
Sbjct: 5  LNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHG 52


>gi|300824089|ref|ZP_07104209.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 119-7]
 gi|300523366|gb|EFK44435.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 119-7]
          Length = 432

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 5/48 (10%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYG 43
          +N  +  +   L+ FSGG DS+  L   +          +  +   +G
Sbjct: 5  LNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHG 52


>gi|300932146|ref|ZP_07147429.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 187-1]
 gi|300460083|gb|EFK23576.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 187-1]
          Length = 432

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 5/48 (10%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYG 43
          +N  +  +   L+ FSGG DS+  L   +          +  +   +G
Sbjct: 5  LNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHG 52


>gi|297520460|ref|ZP_06938846.1| tRNA(Ile)-lysidine synthetase [Escherichia coli OP50]
          Length = 286

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 5/48 (10%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYG 43
          +N  +  +   L+ FSGG DS+  L   +          +  +   +G
Sbjct: 5  LNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHG 52


>gi|257467376|ref|ZP_05631687.1| NAD synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315918506|ref|ZP_07914746.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium gonidiaformans
          ATCC 25563]
 gi|313692381|gb|EFS29216.1| NH(3)-dependent NAD(+) synthetase [Fusobacterium gonidiaformans
          ATCC 25563]
          Length = 259

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 2/54 (3%)

Query: 9  PSALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKI 60
             +L  SGG DS+     A+     + V  +   Y   ++  ++    V + +
Sbjct: 22 KKVILGLSGGIDSALVAYLAVKALGKENVIAIKMPYKTSSQESIDHANLVLQDL 75


>gi|315499649|ref|YP_004088452.1| gmp synthase, large subunit [Asticcacaulis excentricus CB 48]
 gi|315417661|gb|ADU14301.1| GMP synthase, large subunit [Asticcacaulis excentricus CB 48]
          Length = 516

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 50/185 (27%), Gaps = 17/185 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           +   +   SGG DSS       +   +++  +  D G   K E E              +
Sbjct: 218 SGRVICGLSGGVDSSVAAVLIHEAIGEQLTCVFVDTGLLRKNEGE--------------Q 263

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                 + + +PL  +                +        +              A  L
Sbjct: 264 VVSLFRDHYNIPLIHVQAQDKFLGALKGLSDPEQKRKTIGRLFIEVFDEEAAKIDGAEFL 323

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               +   V E+            I++      L     + +  PL  L K E   L ++
Sbjct: 324 AQGTLYPDVVESV--SPHGGPSTVIKSHHNVGGLPDYMKLKLVEPLRELFKDEVRALGRE 381

Query: 187 IGGQD 191
           +G  +
Sbjct: 382 LGLSE 386


>gi|215485349|ref|YP_002327780.1| tRNA(Ile)-lysidine synthetase [Escherichia coli O127:H6 str.
          E2348/69]
 gi|312966325|ref|ZP_07780551.1| tRNA(Ile)-lysidine synthetase [Escherichia coli 2362-75]
 gi|215263421|emb|CAS07741.1| tRNA(Ile)-lysidine synthetase [Escherichia coli O127:H6 str.
          E2348/69]
 gi|312289568|gb|EFR17462.1| tRNA(Ile)-lysidine synthetase [Escherichia coli 2362-75]
          Length = 437

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 5/48 (10%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYG 43
          +N  +  +   L+ FSGG DS+  L   +          +  +   +G
Sbjct: 5  LNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHG 52


>gi|170021459|ref|YP_001726413.1| tRNA(Ile)-lysidine synthetase [Escherichia coli ATCC 8739]
 gi|169756387|gb|ACA79086.1| tRNA(Ile)-lysidine synthetase [Escherichia coli ATCC 8739]
          Length = 432

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 5/48 (10%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYG 43
          +N  +  +   L+ FSGG DS+  L   +          +  +   +G
Sbjct: 5  LNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHG 52


>gi|83776740|gb|ABC46692.1| mitochondrial
          5-methylaminomethyl-2-thiouridylate-methyltransferase
          precursor transcript variant 3 [Homo sapiens]
          Length = 99

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 13/36 (36%)

Query: 5  IKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSF 40
          ++     +   SGG DS+        R  +V  +  
Sbjct: 1  MQALRHVVCSLSGGVDSAVAALLLRRRGYQVTGVFM 36


>gi|30061745|ref|NP_835916.1| tRNA(Ile)-lysidine synthetase [Shigella flexneri 2a str. 2457T]
 gi|30039987|gb|AAP15721.1| cell cycle protein [Shigella flexneri 2a str. 2457T]
 gi|281599543|gb|ADA72527.1| tRNA(Ile)-lysidine synthase [Shigella flexneri 2002017]
 gi|332762035|gb|EGJ92306.1| tRNA(Ile)-lysidine synthase [Shigella flexneri 2747-71]
 gi|332762192|gb|EGJ92461.1| tRNA(Ile)-lysidine synthase [Shigella flexneri 4343-70]
 gi|332765037|gb|EGJ95265.1| tRNA(Ile)-lysidine synthase [Shigella flexneri K-671]
 gi|332768691|gb|EGJ98871.1| hypothetical protein SF293071_0275 [Shigella flexneri 2930-71]
 gi|333009368|gb|EGK28824.1| tRNA(Ile)-lysidine synthase [Shigella flexneri K-218]
 gi|333022234|gb|EGK41473.1| tRNA(Ile)-lysidine synthase [Shigella flexneri K-304]
          Length = 432

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 5/48 (10%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYG 43
          +N  +  +   L+ FSGG DS+  L   +          +  +   +G
Sbjct: 5  LNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHG 52


>gi|47216854|emb|CAG11661.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 619

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 54/194 (27%), Gaps = 14/194 (7%)

Query: 13  LLFSGGQD----SSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            L SGG D    S+T +  A +   +    +F  G  +  +L     V   I     +  
Sbjct: 255 CLLSGGLDSSLVSATLMKLAKEEKLQYPLQTFSIGSEDSPDLLAARKVAAYIGSEHHEVN 314

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQ----DNNLPNTFVPGRNIIFLVFAATLAY 124
            S+ E       ++  +    +T   A   +     +   +  +    +  LV       
Sbjct: 315 FSIQEGIQAVRDVIYHLETYDITTIRASVREYASCSHGNRSIPLVSGELKQLVNKRLQEG 374

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLA 184
             G   +V                +    +        ++              E+ +L 
Sbjct: 375 SRGAMFLVSKYIREKSDSVVIFSGEGSDELTQGYIYFHKAPDPAAAA------AESVRLM 428

Query: 185 QDIGGQDLVNLILE 198
           +++   D++     
Sbjct: 429 EELYLFDVLRSDRS 442


>gi|24111623|ref|NP_706133.1| tRNA(Ile)-lysidine synthetase [Shigella flexneri 2a str. 301]
 gi|61216594|sp|Q7UDQ6|TILS_SHIFL RecName: Full=tRNA(Ile)-lysidine synthase; AltName:
          Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName:
          Full=tRNA(Ile)-lysidine synthetase
 gi|24050392|gb|AAN41840.1| cell cycle protein [Shigella flexneri 2a str. 301]
          Length = 432

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 5/48 (10%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYG 43
          +N  +  +   L+ FSGG DS+  L   +          +  +   +G
Sbjct: 5  LNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHG 52


>gi|7960743|emb|CAB92065.1| asparagine synthetase (ASN3)(fragment) [Arabidopsis thaliana]
          Length = 441

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 48/176 (27%), Gaps = 9/176 (5%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVET-------LS-FDYGQRNKVELECRLCVRKKIVELM 64
           +L SGG DSS   S AL   ++ E        L  F  G +   +L+    V   +    
Sbjct: 93  VLLSGGLDSSLVASVALRHLEKSEAACQWGSKLHTFCIGLKGSPDLKAGREVADYLGTRH 152

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            +      +D I  +  +     +     +        +          + L    +   
Sbjct: 153 HEL-HFTVQDGIDAIEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVLSGEGSDEI 211

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
             G         + ++      +   +   +        S   V   + +L K   
Sbjct: 212 FGGYLYFHKAPNKKEFHEETCRKIKALHQYDCLRANKSTSAWGVEARVPFLDKEFI 267


>gi|83953407|ref|ZP_00962129.1| NAD(+) synthase [Sulfitobacter sp. NAS-14.1]
 gi|83842375|gb|EAP81543.1| NAD(+) synthase [Sulfitobacter sp. NAS-14.1]
          Length = 552

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 45/161 (27%), Gaps = 9/161 (5%)

Query: 1   MNDIIKKA--PSALLLFSGGQDSSTCLSWAL----DRFDRVETLSFDYGQRNKVELECRL 54
           + D + K      LL  SGG DS+   + A+        R   L  +Y  +  ++     
Sbjct: 275 LRDYMGKTGFKKVLLGLSGGIDSAIVATIAVDALGADNVRCVMLPSEYTSQASLDD--AE 332

Query: 55  CVRKKIVELMPKWKDSLGEDHILP-LAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
            V K +         + G   I   LA L + +   LT+          L          
Sbjct: 333 AVAKALGCRYDYVPIAQGRAAITDTLAPLFEGTKPDLTEENIQSRLRGLLLMAVSNKFGE 392

Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAI 154
           + L         +G   I   +           +     + 
Sbjct: 393 MLLTTGNKSEVAVGYATIYGDMAGGYNPIKDMYKTRVFDSC 433


>gi|194439921|ref|ZP_03071983.1| tRNA(Ile)-lysidine synthase [Escherichia coli 101-1]
 gi|253774785|ref|YP_003037616.1| tRNA(Ile)-lysidine synthetase [Escherichia coli
          'BL21-Gold(DE3)pLysS AG']
 gi|254160307|ref|YP_003043415.1| tRNA(Ile)-lysidine synthetase [Escherichia coli B str. REL606]
 gi|312970289|ref|ZP_07784471.1| tRNA(Ile)-lysidine synthetase [Escherichia coli 1827-70]
 gi|194421167|gb|EDX37192.1| tRNA(Ile)-lysidine synthase [Escherichia coli 101-1]
 gi|242376019|emb|CAQ30702.1| tRNA[Ile]-lysidine synthetase [Escherichia coli BL21(DE3)]
 gi|253325829|gb|ACT30431.1| tRNA(Ile)-lysidine synthetase [Escherichia coli
          'BL21-Gold(DE3)pLysS AG']
 gi|253972208|gb|ACT37879.1| tRNA(Ile)-lysidine synthetase [Escherichia coli B str. REL606]
 gi|253976417|gb|ACT42087.1| tRNA(Ile)-lysidine synthetase [Escherichia coli BL21(DE3)]
 gi|310337787|gb|EFQ02898.1| tRNA(Ile)-lysidine synthetase [Escherichia coli 1827-70]
 gi|323959949|gb|EGB55596.1| PP-loop family protein [Escherichia coli H489]
 gi|323970667|gb|EGB65923.1| PP-loop family protein [Escherichia coli TA007]
          Length = 432

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 5/48 (10%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYG 43
          +N  +  +   L+ FSGG DS+  L   +          +  +   +G
Sbjct: 5  LNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHG 52


>gi|188492707|ref|ZP_02999977.1| tRNA(Ile)-lysidine synthetase [Escherichia coli 53638]
 gi|254037607|ref|ZP_04871684.1| tRNA(Ile)-lysidine synthetase [Escherichia sp. 1_1_43]
 gi|188487906|gb|EDU63009.1| tRNA(Ile)-lysidine synthetase [Escherichia coli 53638]
 gi|226840713|gb|EEH72715.1| tRNA(Ile)-lysidine synthetase [Escherichia sp. 1_1_43]
          Length = 432

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 5/48 (10%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYG 43
          +N  +  +   L+ FSGG DS+  L   +          +  +   +G
Sbjct: 5  LNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHG 52


>gi|191167023|ref|ZP_03028845.1| tRNA(Ile)-lysidine synthase [Escherichia coli B7A]
 gi|300816228|ref|ZP_07096451.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 107-1]
 gi|300923020|ref|ZP_07139087.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 182-1]
 gi|309796365|ref|ZP_07690774.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 145-7]
 gi|190902916|gb|EDV62643.1| tRNA(Ile)-lysidine synthase [Escherichia coli B7A]
 gi|300420647|gb|EFK03958.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 182-1]
 gi|300531435|gb|EFK52497.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 107-1]
 gi|308120069|gb|EFO57331.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 145-7]
          Length = 432

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 5/48 (10%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYG 43
          +N  +  +   L+ FSGG DS+  L   +          +  +   +G
Sbjct: 5  LNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHG 52


>gi|157158325|ref|YP_001461357.1| tRNA(Ile)-lysidine synthetase [Escherichia coli E24377A]
 gi|193063304|ref|ZP_03044395.1| tRNA(Ile)-lysidine synthase [Escherichia coli E22]
 gi|193067588|ref|ZP_03048555.1| tRNA(Ile)-lysidine synthase [Escherichia coli E110019]
 gi|194428333|ref|ZP_03060875.1| tRNA(Ile)-lysidine synthase [Escherichia coli B171]
 gi|256021620|ref|ZP_05435485.1| tRNA(Ile)-lysidine synthetase [Shigella sp. D9]
 gi|260842420|ref|YP_003220198.1| tRNA(Ile)-lysidine synthetase [Escherichia coli O103:H2 str.
          12009]
 gi|260853398|ref|YP_003227289.1| tRNA(Ile)-lysidine synthetase [Escherichia coli O26:H11 str.
          11368]
 gi|260866337|ref|YP_003232739.1| tRNA(Ile)-lysidine synthetase [Escherichia coli O111:H- str.
          11128]
 gi|293476845|ref|ZP_06665253.1| cell cycle protein MesJ [Escherichia coli B088]
 gi|332282862|ref|ZP_08395275.1| tRNA(Ile)-lysidine synthetase [Shigella sp. D9]
 gi|157080355|gb|ABV20063.1| tRNA(Ile)-lysidine synthase [Escherichia coli E24377A]
 gi|192931212|gb|EDV83815.1| tRNA(Ile)-lysidine synthase [Escherichia coli E22]
 gi|192959000|gb|EDV89436.1| tRNA(Ile)-lysidine synthase [Escherichia coli E110019]
 gi|194413708|gb|EDX29988.1| tRNA(Ile)-lysidine synthase [Escherichia coli B171]
 gi|257752047|dbj|BAI23549.1| tRNA(Ile)-lysidine synthetase [Escherichia coli O26:H11 str.
          11368]
 gi|257757567|dbj|BAI29064.1| tRNA(Ile)-lysidine synthetase [Escherichia coli O103:H2 str.
          12009]
 gi|257762693|dbj|BAI34188.1| tRNA(Ile)-lysidine synthetase [Escherichia coli O111:H- str.
          11128]
 gi|291321298|gb|EFE60740.1| cell cycle protein MesJ [Escherichia coli B088]
 gi|320200286|gb|EFW74872.1| tRNA(Ile)-lysidine synthetase [Escherichia coli EC4100B]
 gi|323157975|gb|EFZ44077.1| tRNA(Ile)-lysidine synthetase [Escherichia coli EPECa14]
 gi|323176503|gb|EFZ62095.1| tRNA(Ile)-lysidine synthase [Escherichia coli 1180]
 gi|323181696|gb|EFZ67110.1| tRNA(Ile)-lysidine synthase [Escherichia coli 1357]
 gi|332105214|gb|EGJ08560.1| tRNA(Ile)-lysidine synthetase [Shigella sp. D9]
          Length = 432

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 5/48 (10%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYG 43
          +N  +  +   L+ FSGG DS+  L   +          +  +   +G
Sbjct: 5  LNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHG 52


>gi|157159653|ref|YP_001456971.1| tRNA(Ile)-lysidine synthetase [Escherichia coli HS]
 gi|209917378|ref|YP_002291462.1| tRNA(Ile)-lysidine synthetase [Escherichia coli SE11]
 gi|218552769|ref|YP_002385682.1| tRNA(Ile)-lysidine synthetase [Escherichia coli IAI1]
 gi|218693653|ref|YP_002401320.1| tRNA(Ile)-lysidine synthetase [Escherichia coli 55989]
 gi|307311364|ref|ZP_07591006.1| tRNA(Ile)-lysidine synthetase [Escherichia coli W]
 gi|331666429|ref|ZP_08367310.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
          (tRNA(Ile)-2-lysyl-cytidine synthase) [Escherichia coli
          TA271]
 gi|331680767|ref|ZP_08381426.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
          (tRNA(Ile)-2-lysyl-cytidine synthase) [Escherichia coli
          H591]
 gi|157065333|gb|ABV04588.1| tRNA(Ile)-lysidine synthase [Escherichia coli HS]
 gi|209910637|dbj|BAG75711.1| cell cycle protein [Escherichia coli SE11]
 gi|218350385|emb|CAU96068.1| tRNA(Ile)-lysidine synthetase [Escherichia coli 55989]
 gi|218359537|emb|CAQ97075.1| tRNA(Ile)-lysidine synthetase [Escherichia coli IAI1]
 gi|306908343|gb|EFN38841.1| tRNA(Ile)-lysidine synthetase [Escherichia coli W]
 gi|315059406|gb|ADT73733.1| tRNA(Ile)-lysidine synthetase [Escherichia coli W]
 gi|323380035|gb|ADX52303.1| tRNA(Ile)-lysidine synthetase [Escherichia coli KO11]
 gi|323945665|gb|EGB41714.1| PP-loop family protein [Escherichia coli H120]
 gi|324017845|gb|EGB87064.1| tRNA(Ile)-lysidine synthetase [Escherichia coli MS 117-3]
 gi|324118308|gb|EGC12203.1| PP-loop family protein [Escherichia coli E1167]
 gi|331066640|gb|EGI38517.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
          (tRNA(Ile)-2-lysyl-cytidine synthase) [Escherichia coli
          TA271]
 gi|331072230|gb|EGI43566.1| tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase)
          (tRNA(Ile)-2-lysyl-cytidine synthase) [Escherichia coli
          H591]
          Length = 432

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 5/48 (10%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYG 43
          +N  +  +   L+ FSGG DS+  L   +          +  +   +G
Sbjct: 5  LNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHG 52


>gi|82542786|ref|YP_406733.1| tRNA(Ile)-lysidine synthetase [Shigella boydii Sb227]
 gi|187730131|ref|YP_001878990.1| tRNA(Ile)-lysidine synthetase [Shigella boydii CDC 3083-94]
 gi|81244197|gb|ABB64905.1| cell cycle protein [Shigella boydii Sb227]
 gi|187427123|gb|ACD06397.1| tRNA(Ile)-lysidine synthase [Shigella boydii CDC 3083-94]
 gi|320186610|gb|EFW61335.1| tRNA(Ile)-lysidine synthetase [Shigella flexneri CDC 796-83]
 gi|332098780|gb|EGJ03740.1| tRNA(Ile)-lysidine synthase [Shigella boydii 3594-74]
          Length = 432

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 5/48 (10%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDR-----FDRVETLSFDYG 43
          +N  +  +   L+ FSGG DS+  L   +          +  +   +G
Sbjct: 5  LNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHG 52


>gi|326328184|gb|ADZ54159.1| sulfate adenylytranseferase small subunit [uncultured bacterium]
          Length = 319

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 22/179 (12%), Positives = 47/179 (26%), Gaps = 6/179 (3%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDR---FDRVETL-SFDYGQRNKVELECRLCV 56
           M ++  +    +LLFSGG+DS+  L  A            +   D G      +E R   
Sbjct: 38  MREVAAECERPVLLFSGGKDSAVLLRLAEKAFRPGRFPFPVMHVDTGHNFLEVVEFRDKR 97

Query: 57  RKKIVE--LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII 114
             ++ E  ++   ++S+    +      G  +       +                R+  
Sbjct: 98  IAELGEDLIVASVQESIDRGRVADPGPNGSRNRLQSVTLLDAIAAHGFDACIGGARRDED 157

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
                  +              +     +             A  L   + + V   + 
Sbjct: 158 KARAKERILSFRDAFGQWDPRNQRPELWHLYHGRVRPGEHLRAFPLSDWTELDVWQYIR 216


>gi|320096273|ref|ZP_08027852.1| argininosuccinate synthase [Actinomyces sp. oral taxon 178 str.
          F0338]
 gi|319976794|gb|EFW08558.1| argininosuccinate synthase [Actinomyces sp. oral taxon 178 str.
          F0338]
          Length = 407

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 1/56 (1%)

Query: 4  IIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRK 58
          +       +L +SGG D+S  + W  ++    V  ++ D GQ  +     R     
Sbjct: 1  MSTSKDRVVLAYSGGLDTSVAIGWIGEQTGREVVAVAVDVGQGGEDLEVIRQRALD 56


>gi|319784632|ref|YP_004144108.1| sulfate adenylyltransferase small subunit [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317170520|gb|ADV14058.1| sulfate adenylyltransferase, small subunit [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 301

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 20/174 (11%), Positives = 51/174 (29%), Gaps = 7/174 (4%)

Query: 10  SALLLFSGGQDSSTCLSWALDRFD----RVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
             ++L+S G+DSS  +  A+  F         L  D   + +  +  R  + +K+   + 
Sbjct: 28  KPVMLYSVGKDSSVLMHLAMKAFYPAKPPFPFLHVDTTWKFREMIAFRDQMAQKLGFDLL 87

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVP---GRNIIFLVFAATL 122
              +  G    +     G  +H+ + K VA++   +            R+         +
Sbjct: 88  VHVNEDGVRDNINPFDHGSNTHTHVMKTVALRQALDKYGFDAAFGGARRDEEKSRAKERI 147

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
                  ++     +                      L   + + +   ++   
Sbjct: 148 FSFRNAQHVWDPKNQRPEMWKIFNTRIASGESIRVFPLSNWTELDIWQYILQES 201


>gi|307941982|ref|ZP_07657334.1| asparagine synthase (glutamine-hydrolysing) 1 [Roseibium sp.
          TrichSKD4]
 gi|307774772|gb|EFO33981.1| asparagine synthase (glutamine-hydrolysing) 1 [Roseibium sp.
          TrichSKD4]
          Length = 371

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELE-CRLCVRKKIVELMPKW 67
          ++ SGG DSS   + A +   +++T S  +    +++       V K +     + 
Sbjct: 18 VMLSGGLDSSCVAAAAREAGFKLKTYSVAFRDAPEIDERPYARAVAKHLDCEHHEV 73


>gi|295694944|ref|YP_003588182.1| GMP synthase, large subunit [Bacillus tusciae DSM 2912]
 gi|295410546|gb|ADG05038.1| GMP synthase, large subunit [Bacillus tusciae DSM 2912]
          Length = 530

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 48/183 (26%), Gaps = 22/183 (12%)

Query: 11  ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            L   SGG DS+           DR+  +  D+G   K E      V +           
Sbjct: 238 VLCALSGGVDSAVAAVLVHRAVGDRLTCVFVDHGLLRKGE---ADRVMEAFGR------- 287

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                          I           ++     P          F+      A RLG  
Sbjct: 288 ----------GFGMKIVRVDAGGRFLARLVGVRDPEQKRKIIGEEFIRVFEEEADRLGKF 337

Query: 130 -NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G   TD          TI++      L       +  PL  L K E   L  ++G
Sbjct: 338 DFLAQGTLYTDIIESGTKTAATIKSHHNVGGLPERMSFRLIEPLNTLFKDEVRALGTELG 397

Query: 189 GQD 191
             +
Sbjct: 398 IPE 400


>gi|262044741|ref|ZP_06017788.1| tRNA(Ile)-lysidine synthetase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259037891|gb|EEW39115.1| tRNA(Ile)-lysidine synthetase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 259

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 34/121 (28%), Gaps = 10/121 (8%)

Query: 12  LLLFSGGQDSSTCLS---WALDRFDRVE--TLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           L+ FSGG DS+  L       ++   +    +   +G                  ++  +
Sbjct: 20  LVAFSGGLDSTVLLHQLVLLREQDPSLTLRAVHVHHG-----LSVHADDWVVHCRQICQQ 74

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           W+  L   H+        +   +            N     V  ++         LA + 
Sbjct: 75  WQVPLVVHHVTLARGGLGVEAHARAARYQAFQDTLNAGEMLVTAQHQDDQCETLLLALKR 134

Query: 127 G 127
           G
Sbjct: 135 G 135


>gi|256826638|ref|YP_003150597.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Cryptobacterium curtum DSM 15641]
 gi|256582781|gb|ACU93915.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Cryptobacterium curtum DSM 15641]
          Length = 394

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 40/170 (23%), Gaps = 5/170 (2%)

Query: 6   KKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
           ++ P  L+  SGG DSS C +  ++    V                 R      + +   
Sbjct: 46  QRIPRVLVGLSGGVDSSVCAALLVETGWDVCGAYMK--NWTMDVPGMRCPWADDLADAKR 103

Query: 66  KWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYR 125
                  +  +       +     +   +  + +    PN  V     +        A  
Sbjct: 104 VAVRLGIDFRVYD---FQEAYKREVVDYLVDEYRAGRTPNPDVMCNQQVKFGLFFDAAQD 160

Query: 126 LGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWL 175
            G   I  G                    +    L   S   V   +  L
Sbjct: 161 DGFDYIATGHYARASHDPVRLLRAADTHKDQTYFLYRMSSDAVAHTIFPL 210


>gi|261191592|ref|XP_002622204.1| GMP synthase subunit B [Ajellomyces dermatitidis SLH14081]
 gi|239589970|gb|EEQ72613.1| GMP synthase subunit B [Ajellomyces dermatitidis SLH14081]
 gi|239612622|gb|EEQ89609.1| GMP synthase subunit B [Ajellomyces dermatitidis ER-3]
 gi|327356872|gb|EGE85729.1| GMP synthase subunit B [Ajellomyces dermatitidis ATCC 18188]
          Length = 543

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 54/196 (27%), Gaps = 13/196 (6%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
             ++ +    +   SGG DS+           +R   +  D G          L + +  
Sbjct: 229 RKLVGEKGQVIGAVSGGVDSTVAAKLMQKAIGNRFHAVLVDNG---------VLRLNEAA 279

Query: 61  VELMPKWKDSLGEDHILPLA--ILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVF 118
           +      K       ++  +   L  +   +       K+  N     F      I    
Sbjct: 280 IVKETLTKHLGVNLTVVDASERFLSKLKGITDDPEKKRKVIGNTFIEVFQEEAKKIAAAA 339

Query: 119 AATLAYRLGITNIV-IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKK 177
             +         +      +   S        TI+       L    H+ +  PL  L K
Sbjct: 340 QGSPNEGEIEWLLQGTLYPDVIESISFKGPSATIKTHHNVGGLLEGMHLKLIEPLRELFK 399

Query: 178 YETWKLAQDIGGQDLV 193
            E  +L + +G  + +
Sbjct: 400 DEVRELGKQLGIPEEL 415


>gi|288574621|ref|ZP_06392978.1| GMP synthase, large subunit [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570362|gb|EFC91919.1| GMP synthase, large subunit [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 510

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 54/180 (30%), Gaps = 19/180 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +   SGG DSS   +       DR++ +  D G     E E                
Sbjct: 215 DRVICGLSGGVDSSVAAALVSKAIGDRLQCIFVDTGMLRDREAE-------------EVL 261

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +     D  +      +   ++L      + +   +   FV  R         + A  L 
Sbjct: 262 ESYEAMDLNVVHVDASERFLTALEGVTDPERKRKIIGELFV--RVFEAESAKISDAKWLL 319

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +   V E   SG+       I++      L  +  + V  PL  L K E   + + +
Sbjct: 320 QGTLYPDVIE---SGHQGKNAAVIKSHHNVGGLPEDMDLKVLEPLRDLFKDEVRAIGRIL 376


>gi|254825867|ref|ZP_05230868.1| hypoxanthine phosphoribosyltransferase [Listeria monocytogenes FSL
           J1-194]
 gi|255521743|ref|ZP_05388980.1| hypothetical protein LmonocFSL_11047 [Listeria monocytogenes FSL
           J1-175]
 gi|293595106|gb|EFG02867.1| hypoxanthine phosphoribosyltransferase [Listeria monocytogenes FSL
           J1-194]
          Length = 648

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 54/194 (27%), Gaps = 18/194 (9%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRV-ETLSFDYGQRNKVELECRLCVRKKIV 61
           D+I+     L+  SGG DS   L +  +      E +S  +   +  E        + +V
Sbjct: 16  DLIRSDDKLLVAVSGGPDSLALLHFLWNSNLVPKEAISVAHINHHLRENAANG---QNVV 72

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           E   + +        + +    +     + +   +   D           N + L   A 
Sbjct: 73  EAFCESQGIPFYIEEVDVKSRAESLQKGIEETARIVRYDFFEKVMAEKKINKLALAHHAD 132

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
                 +  +V G     +SG    R                       P + + K E  
Sbjct: 133 DQIETILMRLVRGSASIGWSGIQPKRELKGGQA--------------IRPFLPITKAEII 178

Query: 182 KLAQDIGGQDLVNL 195
             AQ       ++ 
Sbjct: 179 DYAQKHELAYEIDE 192


>gi|254283294|ref|ZP_04958262.1| GMP synthase [gamma proteobacterium NOR51-B]
 gi|219679497|gb|EED35846.1| GMP synthase [gamma proteobacterium NOR51-B]
          Length = 525

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 55/184 (29%), Gaps = 19/184 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYG-QRNKVELECRLCVRKKIVELMPK 66
              LL  SGG DSS   +       D++  +  D G  R +   +      + +   + +
Sbjct: 228 DKVLLGLSGGVDSSVVAALLHRAIGDQLTCVFVDNGLLRKQEGDQVMDMFARNMGVRVIR 287

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
                     L L  L   S     + +          +     +++ +L          
Sbjct: 288 VDAEA-----LFLGKLRGESDPEAKRKIIGNTFIEIFDDEAGKIQDVKWLAQGTIY---- 338

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                       + +G    +   I++      L  +  + +  PL  L K E  ++  +
Sbjct: 339 --------PDVIESAGGKTGKAHVIKSHHNVGGLPDDMALELVEPLRELFKDEVRQIGLE 390

Query: 187 IGGQ 190
           +G  
Sbjct: 391 LGLP 394


>gi|189467232|ref|ZP_03016017.1| hypothetical protein BACINT_03617 [Bacteroides intestinalis DSM
          17393]
 gi|189435496|gb|EDV04481.1| hypothetical protein BACINT_03617 [Bacteroides intestinalis DSM
          17393]
          Length = 443

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 16/43 (37%)

Query: 3  DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQR 45
           +  +    L+  SGG DS   L   LD     E    ++  R
Sbjct: 14 KLFTREDKILVTLSGGADSVALLRLLLDMGYTCEAAHCNFHLR 56


>gi|34762609|ref|ZP_00143603.1| GMP synthase [glutamine-hydrolyzing] [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
 gi|27887733|gb|EAA24808.1| GMP synthase [glutamine-hydrolyzing] [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
          Length = 512

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 57/187 (30%), Gaps = 18/187 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L  SGG DSS   +        ++  +  D G   K E        K+++E+  K
Sbjct: 215 NKQVILGLSGGVDSSVAAALINKAIGKQLTCIFVDTGLLRKDE-------AKQVMEVYAK 267

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
             D   +        L  ++  +  +     I    +                   A  L
Sbjct: 268 NFDMNIKCINAEERFLSKLAGVTDPETKRKIIGKEFVE-------VFNEEAKKIEGAEFL 320

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
               I   V E+     P      I++      L  +    +  PL  L K E  K+ ++
Sbjct: 321 AQGTIYPDVIESVSVKGPSVT---IKSHHNVGGLPEDLKFELLEPLRELFKDEVRKVGRE 377

Query: 187 IGGQDLV 193
           +   D +
Sbjct: 378 LSIPDYM 384


>gi|315133419|emb|CBY83873.1| LPS biosynthesis protein [Legionella pneumophila subsp. pneumophila
           ATCC 33215]
          Length = 388

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 20/148 (13%), Positives = 47/148 (31%), Gaps = 20/148 (13%)

Query: 11  ALLLFSGGQDSS-TCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
            ++ FSGG+DS+ T L    +   +   + F++G   +   +      K++         
Sbjct: 61  CIIPFSGGKDSTFTLLYLMREYKIKPLVVQFNHGFMREKLKQNNERTFKQLG-------- 112

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                  + +              +   I+  +         +     +   +A +    
Sbjct: 113 -------VDVLSFTPNWKIVKRLMLESLIRKGDFCWH----CHTGIFSYPMQVAIKYNTP 161

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETA 157
            I  G   ++Y+ Y D R + I  +   
Sbjct: 162 LIFWGEPSSEYTAYYDYRDNEIEEVNEE 189


>gi|312870558|ref|ZP_07730675.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Lactobacillus oris PB013-T2-3]
 gi|311093918|gb|EFQ52245.1| GMP synthase (glutamine-hydrolyzing), C-terminal domain protein
           [Lactobacillus oris PB013-T2-3]
          Length = 517

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 54/186 (29%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS           D++  +  D+G   K E +      + +  L    
Sbjct: 223 KKVILGLSGGVDSSVTAVLIHKAIDDQLTCIFVDHGLLRKNEAD------QVMKALNKDL 276

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
             ++ +       +      +   +   +  ++                 F         
Sbjct: 277 GVNIVKVDAADRFLGKLAGVTDPEQKRKIIGKEFIEV-------------FNEEAKKIPD 323

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              +  G   TD          TI++      L  +    +  PL  L K ET +L + +
Sbjct: 324 ADFLAQGTLYTDVIESGTDTAQTIKSHHNVGGLPKKLGFKLIEPLRKLFKDETRELGEKL 383

Query: 188 GGQDLV 193
           G    +
Sbjct: 384 GIPHEL 389


>gi|290958838|ref|YP_003490020.1| argininosuccinate synthase [Streptomyces scabiei 87.22]
 gi|260648364|emb|CBG71475.1| argininosuccinate synthase [Streptomyces scabiei 87.22]
          Length = 484

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 26/57 (45%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  ++W  D+     T + D GQ ++ ++       K     + +  D
Sbjct: 16 IAFSGGLDTSVAVAWMRDKGAVPCTYTADIGQYDEPDIASVPGRAKTYGAEIARLVD 72


>gi|302555095|ref|ZP_07307437.1| argininosuccinate synthase [Streptomyces viridochromogenes DSM
          40736]
 gi|302472713|gb|EFL35806.1| argininosuccinate synthase [Streptomyces viridochromogenes DSM
          40736]
          Length = 484

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 26/57 (45%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  ++W  D+     T + D GQ ++ ++       K     + +  D
Sbjct: 16 IAFSGGLDTSVAVAWMRDKGAVPCTYTADIGQYDEPDIASVPGRAKTYGAEIARLVD 72


>gi|302532363|ref|ZP_07284705.1| argininosuccinate synthase [Streptomyces sp. C]
 gi|302441258|gb|EFL13074.1| argininosuccinate synthase [Streptomyces sp. C]
          Length = 484

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 26/57 (45%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  ++W  D+     T + D GQ ++ ++       K     + +  D
Sbjct: 16 IAFSGGLDTSVAVAWMRDKGAVPCTYTADIGQYDEPDIASVPGRAKTYGAEIARLVD 72


>gi|242240146|ref|YP_002988327.1| GMP synthase, large subunit [Dickeya dadantii Ech703]
 gi|242132203|gb|ACS86505.1| GMP synthase, large subunit [Dickeya dadantii Ech703]
          Length = 525

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 50/184 (27%), Gaps = 17/184 (9%)

Query: 8   APSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           A   +L  SGG DSS           DR+  +  D G    + L     V +   +    
Sbjct: 227 ADKVILGLSGGVDSSVTALLLHRAIGDRLTCVFVDNG---LLRLNEAEQVMEMFGDQFGL 283

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
               +  +     A+ G     +  K +     D                          
Sbjct: 284 NIVHVPAEERFLSALAGIADPEAKRKTIGRVFVDVFDEEAGKLTDVKWLAQGT------- 336

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
                 I     + +     +   I++      L  +  + +  PL  L K E  K+  +
Sbjct: 337 ------IYPDVIESAASATGKAHVIKSHHNVGGLPDDMALGLVEPLKELFKDEVRKIGLE 390

Query: 187 IGGQ 190
           +G  
Sbjct: 391 LGLP 394


>gi|227509854|ref|ZP_03939903.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Lactobacillus brevis subsp. gravesensis ATCC 27305]
 gi|227190778|gb|EEI70845.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Lactobacillus brevis subsp. gravesensis ATCC 27305]
          Length = 538

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 57/186 (30%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS            ++ ++  D+G                   L+ K 
Sbjct: 244 KKVLLGLSGGVDSSVVGVLLHKAIGSQLTSIFVDHG-------------------LLRKN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +     D ++    L  I   +  + ++      +         N    VF        G
Sbjct: 285 EAQQVMDSLVGKFGLNIIKVDAQERFLSKLEGVTDPEKKRKIIGNEFIQVFNDEARKLDG 344

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G   TD          TI++      L  +    +  PL  L K E  ++ + +
Sbjct: 345 IDFLAQGTLYTDVVESGTDTAQTIKSHHNVGGLPKDMKFKLIEPLNKLFKDEAREIGEKL 404

Query: 188 GGQDLV 193
           G  + +
Sbjct: 405 GMPESL 410


>gi|227512790|ref|ZP_03942839.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Lactobacillus buchneri ATCC 11577]
 gi|227522914|ref|ZP_03952963.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Lactobacillus hilgardii ATCC 8290]
 gi|227083990|gb|EEI19302.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Lactobacillus buchneri ATCC 11577]
 gi|227089943|gb|EEI25255.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Lactobacillus hilgardii ATCC 8290]
          Length = 538

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 57/186 (30%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS            ++ ++  D+G                   L+ K 
Sbjct: 244 KKVLLGLSGGVDSSVVGVLLHKAIGSQLTSIFVDHG-------------------LLRKN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +     D ++    L  I   +  + ++      +         N    VF        G
Sbjct: 285 EAQQVMDSLVGKFGLNIIKVDAQERFLSKLEGVTDPEKKRKIIGNEFIQVFNDEARKLDG 344

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G   TD          TI++      L  +    +  PL  L K E  ++ + +
Sbjct: 345 IDFLAQGTLYTDVVESGTDTAQTIKSHHNVGGLPKDMKFKLIEPLNKLFKDEAREIGEKL 404

Query: 188 GGQDLV 193
           G  + +
Sbjct: 405 GMPESL 410


>gi|194366664|ref|YP_002029274.1| tRNA(Ile)-lysidine synthetase [Stenotrophomonas maltophilia R551-3]
 gi|194349468|gb|ACF52591.1| tRNA(Ile)-lysidine synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 476

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 4/55 (7%)

Query: 11  ALLLFSGGQDSSTCLSW----ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIV 61
            L+ +SGG DS+  L W    A      +  +   +G +   +     C ++ I 
Sbjct: 62  VLVGYSGGVDSTVLLHWLWRCAQASGTPLRAVHIHHGLQAAADEWVLHCQQQCIA 116


>gi|193215981|ref|YP_001997180.1| argininosuccinate synthase [Chloroherpeton thalassium ATCC 35110]
 gi|193089458|gb|ACF14733.1| Argininosuccinate synthase [Chloroherpeton thalassium ATCC 35110]
          Length = 424

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 3/58 (5%)

Query: 1  MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVR 57
          M+DI  K     L +SGG D+S  + W  +++D  +  ++ + GQ+ ++E      ++
Sbjct: 1  MSDI--KKEKIALAYSGGLDTSVMIKWLAEKYDAEIVAVTGNLGQQKEIENLEEKALK 56


>gi|86156134|gb|ABC86785.1| GMP synthase [Borrelia turicatae]
          Length = 512

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 58/186 (31%), Gaps = 18/186 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DS  C     +     +  +  D G   K E          + E++   
Sbjct: 216 KKVILGLSGGTDSLVCALLINNAIKSNLICVFIDTGLLRKNE----------VREILELG 265

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
           +        +  + +   +  ++ +    +     +  TFV     + L          G
Sbjct: 266 RQYNLNIKYVDSSSIFLKNLENIDEPEEKR---KIIGRTFVEIFEKVALEDKDVEFLAQG 322

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
              I   V E++           I++      L  +  + +  PL  L K E  +L   +
Sbjct: 323 --TIYSDVIESESRNNVFSS--HIKSHHNVGGLPEKIRLKLLEPLRELFKDEVIQLGIQL 378

Query: 188 GGQDLV 193
           G ++  
Sbjct: 379 GIEENS 384


>gi|221133879|ref|ZP_03560184.1| bifunctional GMP synthase/glutamine amidotransferase protein
           [Glaciecola sp. HTCC2999]
          Length = 525

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 48/181 (26%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS            ++  +  D G     E +              +  D
Sbjct: 230 VILGLSGGVDSSVVAMLIHRAIGPKLTCVFVDNGLLRLNEGQ--------------QVMD 275

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
             G+   L +  +                +                       A  L   
Sbjct: 276 MFGDHFGLNIIKVDAEDRFLAALADESDPEAKRKIIGHEFVNVFDEESRKLENAKWLAQG 335

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            I   V E+  S         I++      L  +  + +  PL  L K E  K+  ++G 
Sbjct: 336 TIYPDVIESAGSATGKAHV--IKSHHNVGGLPEDMEMGLVEPLRELFKDEVRKIGLELGL 393

Query: 190 Q 190
            
Sbjct: 394 P 394


>gi|29827342|ref|NP_821976.1| argininosuccinate synthase [Streptomyces avermitilis MA-4680]
 gi|29604441|dbj|BAC68511.1| putative argininosuccinate synthase [Streptomyces avermitilis
          MA-4680]
          Length = 484

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 26/57 (45%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  ++W  D+     T + D GQ ++ ++       K     + +  D
Sbjct: 16 IAFSGGLDTSVAVAWMRDKGAVPCTYTADIGQYDEPDIASVPGRAKTYGAEIARLVD 72


>gi|312880435|ref|ZP_07740235.1| GMP synthase (glutamine-hydrolyzing) [Aminomonas paucivorans DSM
           12260]
 gi|310783726|gb|EFQ24124.1| GMP synthase (glutamine-hydrolyzing) [Aminomonas paucivorans DSM
           12260]
          Length = 513

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 58/186 (31%), Gaps = 21/186 (11%)

Query: 8   APSALLLFSGGQDSSTCLSW-ALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
           A   L   SGG DS+      A    D+++ L  D G   K E         ++++    
Sbjct: 217 AERVLCGLSGGVDSTVAAVLTARALGDQLQCLFVDNGLLRKDE-------ADQVMDTYRV 269

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
              S+   H +     G     +L      + +   +  TFV     +            
Sbjct: 270 LDLSV---HRVD---AGGRFLGALAGVTDPEAKRKAIGWTFVEVFEDVAGGLGGA----- 318

Query: 127 GITNIV-IGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQ 185
               +      +   SG+       I++      L     + V  PL  L K E  ++ +
Sbjct: 319 -AWLLQGTLYPDVIESGHQGKGASVIKSHHNVGGLPEIMKMKVLEPLRDLFKDEVRQIGR 377

Query: 186 DIGGQD 191
            +G  +
Sbjct: 378 LLGIPE 383


>gi|291225664|ref|XP_002732808.1| PREDICTED: asparagiNyl tRNA Synthetase family member (nrs-2)-like
           [Saccoglossus kowalevskii]
          Length = 556

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 34/138 (24%), Gaps = 4/138 (2%)

Query: 13  LLFSGGQDSS---TCLSWALDRFDRVETL-SFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            L SGG DSS   + L            + +F  G     +L+    V   +     +  
Sbjct: 252 CLLSGGLDSSLICSLLIKTAKEQGITYPVQTFSIGMEGSPDLKAARKVANYLGTEHHEVV 311

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
            +  E   +   ++  +    +T   A                +++            G 
Sbjct: 312 FTAEEGIEVLEDVIYSLETYDITTIRASVGMYLVSKYINKMTDSVVIFSGEGADEVCQGY 371

Query: 129 TNIVIGVCETDYSGYPDC 146
                     + S     
Sbjct: 372 IYFHKAPSAEEASVDSHR 389


>gi|261820583|ref|YP_003258689.1| GMP synthase [Pectobacterium wasabiae WPP163]
 gi|261604596|gb|ACX87082.1| GMP synthase, large subunit [Pectobacterium wasabiae WPP163]
          Length = 525

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 50/181 (27%), Gaps = 18/181 (9%)

Query: 12  LLL-FSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           ++L  SGG DSS           DR+  +  D G    + L     V +   +       
Sbjct: 230 VILGLSGGVDSSVTAMLLHRAIGDRLTCVFVDNG---LLRLNEADQVLEMFGDHFGLNIV 286

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
            +  +      + G+    +  K +     +                             
Sbjct: 287 HVAAEDRFLNELAGENDPEAKRKIIGRVFVEVFDEEANKQTDVKWLAQGT---------- 336

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
              I     + +     +   I++      L  E  + +  PL  L K E  K+  ++G 
Sbjct: 337 ---IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKLGLVEPLKELFKDEVRKIGLELGL 393

Query: 190 Q 190
            
Sbjct: 394 P 394


>gi|197301846|ref|ZP_03166915.1| hypothetical protein RUMLAC_00572 [Ruminococcus lactaris ATCC
           29176]
 gi|197299076|gb|EDY33607.1| hypothetical protein RUMLAC_00572 [Ruminococcus lactaris ATCC
           29176]
          Length = 409

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 59/211 (27%), Gaps = 23/211 (10%)

Query: 8   APSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYGQRNKVELECRLCVRKKIVELMPK 66
               +L +SGG D++  + W  + F   V     D GQ  +++         K+      
Sbjct: 3   KEKVVLAYSGGLDTTAIIPWLKETFNYDVVCCCIDCGQGEELDGLDERA---KLSGASKL 59

Query: 67  WKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRL 126
           + +++ ++               +    A  + +N         R  I        A + 
Sbjct: 60  YIENIVDEFCDDFI---------VPCVKAGAVYENKYLLGTSMARPAIAKKLVEI-ARKE 109

Query: 127 GITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQD 186
           G   I  G                  A +  I                  + +  +  + 
Sbjct: 110 GAVAICHGATGKGNDQIRFELGIKALAPDIKIIAPWRMTD----VWTMQSREDEIEYCRQ 165

Query: 187 IGGQDLVNLILEESHTCYLGKRDKRYEWGYG 217
            G    ++L  +  H+ Y   R+  +    G
Sbjct: 166 HG----IDLPFDVKHS-YSRDRNLWHISHEG 191


>gi|134277282|ref|ZP_01763997.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei 305]
 gi|134250932|gb|EBA51011.1| sulfate adenylyltransferase, small subunit [Burkholderia
           pseudomallei 305]
          Length = 376

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 51/195 (26%), Gaps = 19/195 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF---------DRVETLSFDYGQRNKVELE 51
           + +++ +     LLFSGG+DS   L  AL  F              +  D G      ++
Sbjct: 90  LRELVAECSKPALLFSGGKDSMVVLHLALKAFGLGANRRTTLPFPLVHIDTGHNYDEVID 149

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
            R    ++I          L   H+      G +     T +         L      G 
Sbjct: 150 FRDRRAQQIGA-------ELVVGHVEDSIARGTVVLRRETDSRNAAQAVTLLETIERHGY 202

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
             +                I     E         R +        ++ G    V    P
Sbjct: 203 TAMIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHRGEHLRV---FP 259

Query: 172 LMWLKKYETWKLAQD 186
           +    + + W+    
Sbjct: 260 ISNWTELDVWQYIAR 274


>gi|70985853|ref|XP_748432.1| GMP synthase [Aspergillus fumigatus Af293]
 gi|74668392|sp|Q4WFT3|GUAA_ASPFU RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|66846061|gb|EAL86394.1| GMP synthase [Aspergillus fumigatus Af293]
 gi|159128433|gb|EDP53548.1| GMP synthase [Aspergillus fumigatus A1163]
          Length = 557

 Score = 41.4 bits (95), Expect = 0.10,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 52/193 (26%), Gaps = 6/193 (3%)

Query: 2   NDIIKKAPSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKI 60
             ++ +    L   SGG DS+       +   DR   +  + G     E E    V + +
Sbjct: 224 RKLVGETDHVLGAVSGGVDSTVAAKLMKEAIGDRFHAVLVNNGCMRLNECET---VAETL 280

Query: 61  VELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAA 120
            + +      +         + G          +     D                    
Sbjct: 281 NKHLGINLTVVDASKRFLDGLKGVTDPEKKRMFIGATFIDVFEEEAEKIEALAENSGAKV 340

Query: 121 TLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
               +  +   VI              H  + A+   +  G    + +  PL  L K E 
Sbjct: 341 KWFLQGTLYPDVIESISFKGPSATIKTHHNVGALPKRMIEG--QGMKLIEPLRELFKDEV 398

Query: 181 WKLAQDIGGQDLV 193
            +L +++G    +
Sbjct: 399 RQLGRELGIAHEL 411


>gi|310764931|gb|ADP09881.1| tRNA(Ile)-lysidine synthase [Erwinia sp. Ejp617]
          Length = 433

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 6/57 (10%)

Query: 8  APSALLL-FSGGQDSSTCLSWALD-RFDRVE----TLSFDYGQRNKVELECRLCVRK 58
             A+LL +SGG DSS  L   +  R  R       +   +G     +     C ++
Sbjct: 13 TERAVLLAYSGGLDSSVLLHQLVQLREQRPHLQLRAVHIHHGLSQLADDWAAHCQQQ 69


>gi|295696782|ref|YP_003590020.1| argininosuccinate synthase [Bacillus tusciae DSM 2912]
 gi|295412384|gb|ADG06876.1| argininosuccinate synthase [Bacillus tusciae DSM 2912]
          Length = 425

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 8  APSALLLFSGGQDSSTCLSWALDRF-DRVETLSFDYG 43
           P  +L +SGG D+S  ++W  ++F   V  L  D G
Sbjct: 3  KPKIVLAYSGGLDTSVAIAWLKEKFEYDVVALCLDVG 39


>gi|257052580|ref|YP_003130413.1| argininosuccinate synthase [Halorhabdus utahensis DSM 12940]
 gi|256691343|gb|ACV11680.1| argininosuccinate synthase [Halorhabdus utahensis DSM 12940]
          Length = 404

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 3/51 (5%)

Query: 13 LLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIV 61
          L FSGG D++ C+    +   +D V  ++ D GQ    E +      + + 
Sbjct: 12 LAFSGGLDTTVCVPLLKEEYGYDDVIGVTVDVGQ-PDYEFDEAEETAEALG 61


>gi|226950082|ref|YP_002805173.1| argininosuccinate synthase [Clostridium botulinum A2 str. Kyoto]
 gi|254807516|sp|C1FU68|ASSY_CLOBJ RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|226843767|gb|ACO86433.1| argininosuccinate synthase [Clostridium botulinum A2 str. Kyoto]
          Length = 397

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 31/73 (42%), Gaps = 4/73 (5%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               +L +SGG D+S  + W  + +D  V  +  + GQ + ++      ++        
Sbjct: 1  MKEKVVLAYSGGLDTSIIIPWLKENYDLDVIAVCVNVGQGDDMDYVKTKAIK---SGASK 57

Query: 66 KWKDSLGEDHILP 78
           + + + E+ ++ 
Sbjct: 58 IYVEDVKEEFVVD 70


>gi|222624725|gb|EEE58857.1| hypothetical protein OsJ_10452 [Oryza sativa Japonica Group]
          Length = 601

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/178 (10%), Positives = 44/178 (24%), Gaps = 13/178 (7%)

Query: 13  LLFSGGQDSSTCLSWALDR----------FDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
           +L SGG DSS   +                  +   SF  G     +L     V   +  
Sbjct: 217 VLLSGGLDSSLVAAVTKRHLIKTEAAEKFGAELH--SFVVGLEGSPDLIAAREVADHLGT 274

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +  ++     +D I  +  +     +     +        +          + L    + 
Sbjct: 275 IHHEF-HFTVQDGIDAIEEVIYHDETYDVTTIRASTPMFLMARKIKALGVKMVLSGEGSD 333

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
               G         + ++      +   +   +        S   +   + +L K   
Sbjct: 334 ELLGGYLYFHFAPNKEEFHKETCRKVKALHQYDCLRANKATSAWGLEVRVPFLDKEFI 391


>gi|148380628|ref|YP_001255169.1| argininosuccinate synthase [Clostridium botulinum A str. ATCC
          3502]
 gi|153931738|ref|YP_001384913.1| argininosuccinate synthase [Clostridium botulinum A str. ATCC
          19397]
 gi|153936553|ref|YP_001388382.1| argininosuccinate synthase [Clostridium botulinum A str. Hall]
 gi|171769227|sp|A7FWU6|ASSY_CLOB1 RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|172047786|sp|A5I5A4|ASSY_CLOBH RecName: Full=Argininosuccinate synthase; AltName:
          Full=Citrulline--aspartate ligase
 gi|148290112|emb|CAL84231.1| argininosuccinate synthase [Clostridium botulinum A str. ATCC
          3502]
 gi|152927782|gb|ABS33282.1| argininosuccinate synthase [Clostridium botulinum A str. ATCC
          19397]
 gi|152932467|gb|ABS37966.1| argininosuccinate synthase [Clostridium botulinum A str. Hall]
          Length = 397

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 31/73 (42%), Gaps = 4/73 (5%)

Query: 7  KAPSALLLFSGGQDSSTCLSWALDRFD-RVETLSFDYGQRNKVELECRLCVRKKIVELMP 65
               +L +SGG D+S  + W  + +D  V  +  + GQ + ++      ++        
Sbjct: 1  MKEKVVLAYSGGLDTSIIIPWLKENYDLDVIAVCVNVGQGDDMDYVKTKAIK---SGASK 57

Query: 66 KWKDSLGEDHILP 78
           + + + E+ ++ 
Sbjct: 58 IYVEDVKEEFVVD 70


>gi|33862371|ref|NP_893931.1| LPS biosynthesis protein [Prochlorococcus marinus str. MIT 9313]
 gi|33640484|emb|CAE20273.1| LPS biosynthesis protein [Prochlorococcus marinus str. MIT 9313]
          Length = 415

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 30/74 (40%), Gaps = 2/74 (2%)

Query: 11  ALLLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
            L+ FSGG+DS+  L + ++R    +   + F++G            V +K+   +  + 
Sbjct: 68  CLIPFSGGKDSTWTLYYLMNRYPGIKPLVVRFNHGFLRPNLRANCDRVFRKLGVDVHDFS 127

Query: 69  DSLGEDHILPLAIL 82
            S      L L   
Sbjct: 128 PSWKVVQRLMLQSF 141


>gi|116627714|ref|YP_820333.1| GMP synthase [Streptococcus thermophilus LMD-9]
 gi|116100991|gb|ABJ66137.1| GMP synthase (glutamine-hydrolyzing) [Streptococcus thermophilus
           LMD-9]
 gi|312278262|gb|ADQ62919.1| Bifunctional GMP synthase/glutamineamidotransferase protein
           [Streptococcus thermophilus ND03]
          Length = 520

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 56/185 (30%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS           D++  +  D+G   K E +          ++M    
Sbjct: 227 KVLLGLSGGVDSSVVGVLLQKAIGDQLTCIFVDHGLLRKGESD----------QVMEMLG 276

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
              G + I   A    +   +   +   K +        V       L          G+
Sbjct: 277 GKFGLNIIRVDASKRFLDLLAGVDDPEKKRKIIGNEFVHVFDDEASKL---------KGV 327

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G   TD          TI++      L  +    +  PL  L K E   L  ++G
Sbjct: 328 DFLAQGTLYTDIIESGTETAQTIKSHHNVGGLPEDMQFELIEPLNTLFKDEVRALGTELG 387

Query: 189 GQDLV 193
             D V
Sbjct: 388 MPDEV 392


>gi|330718567|ref|ZP_08313167.1| GMP synthase [Leuconostoc fallax KCTC 3537]
          Length = 516

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 56/186 (30%), Gaps = 20/186 (10%)

Query: 9   PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              LL  SGG DSS           D++ ++  D+G   K E      V + +       
Sbjct: 222 KKVLLGLSGGVDSSVVGVLLQRAIGDQLTSIFVDHGLLRKNE---ADAVMESLGGKFGLN 278

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +       L  L  ++     + +               G   I +          G
Sbjct: 279 IIKVDAQERF-LTKLSGVTDPEKKRKI--------------IGNEFIQVFNDEAQ-KLDG 322

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
           I  +  G   TD          TI++      L  + H  +  PL  L K E  +L + +
Sbjct: 323 IDYLAQGTLYTDVIESGTDTAQTIKSHHNVGGLPEDMHFKLIEPLNKLFKDEVRELGEAL 382

Query: 188 GGQDLV 193
           G    +
Sbjct: 383 GMPHEL 388


>gi|330818024|ref|YP_004361729.1| sulfate adenylyltransferase, small subunit [Burkholderia gladioli
           BSR3]
 gi|327370417|gb|AEA61773.1| sulfate adenylyltransferase, small subunit [Burkholderia gladioli
           BSR3]
          Length = 320

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 51/195 (26%), Gaps = 19/195 (9%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRF---------DRVETLSFDYGQRNKVELE 51
           + +++ +     LLFSGG+DS   L  AL  F              +  D G      ++
Sbjct: 34  LRELVAECSKPALLFSGGKDSVVVLHLALKAFGLGPDRKTSLPFPLVHIDTGHNYDEVID 93

Query: 52  CRLCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGR 111
            R    K+I          L   H+      G +     T +         L      G 
Sbjct: 94  FRDRRAKEIGA-------ELVVGHVEDSIQRGTVVLRRETDSRNAAQAVTLLETIEQYGY 146

Query: 112 NIIFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTP 171
             +                I     E         R +        ++ G    V    P
Sbjct: 147 TAMIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHKGEHLRV---FP 203

Query: 172 LMWLKKYETWKLAQD 186
           +    + + W+    
Sbjct: 204 ISNWTELDVWQYIAR 218


>gi|320160654|ref|YP_004173878.1| argininosuccinate synthase [Anaerolinea thermophila UNI-1]
 gi|319994507|dbj|BAJ63278.1| argininosuccinate synthase [Anaerolinea thermophila UNI-1]
          Length = 424

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 9  PSALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQ 44
             +L +SGG D+S  + W  +     V   + D GQ
Sbjct: 11 KKVVLAYSGGLDTSIIVPWLKENYGCEVICFTADIGQ 47


>gi|291279007|ref|YP_003495842.1| hypothetical protein DEFDS_0604 [Deferribacter desulfuricans SSM1]
 gi|290753709|dbj|BAI80086.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 300

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 27/81 (33%), Gaps = 8/81 (9%)

Query: 3   DIIKKAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVE 62
            +  +    L+  SGG+DS             V  +  + G       E     + K++ 
Sbjct: 42  RMFSRKDKILVCVSGGKDSLVLWLVLSKLGYNVTGMYINLGI-----DEYSEKSKTKVIN 96

Query: 63  LMPKWKDSLGEDHILPLAILG 83
              K   +  +  I+ L  LG
Sbjct: 97  FAEK---NNLKYTIVDLNELG 114


>gi|212275141|ref|NP_001131013.1| asparagine synthetase2 [Zea mays]
 gi|205362420|emb|CAR70073.1| asparagine synthetase [Zea mays]
 gi|208011517|emb|CAR82079.1| asparagine synthetase [Zea mays]
 gi|223947911|gb|ACN28039.1| unknown [Zea mays]
 gi|223949581|gb|ACN28874.1| unknown [Zea mays]
 gi|238006400|gb|ACR34235.1| unknown [Zea mays]
          Length = 606

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/176 (12%), Positives = 49/176 (27%), Gaps = 9/176 (5%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETL--------SFDYGQRNKVELECRLCVRKKIVELM 64
           +L SGG DSS   + A+    R E          SF  G     +L+    V + +  L 
Sbjct: 247 VLLSGGLDSSLVATVAVRHLARTEAARRWGTKLHSFCVGLEGSPDLKAAREVAEYLGTLH 306

Query: 65  PKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAY 124
            ++     +D I  +  +   + +     +        +          + +    +   
Sbjct: 307 HEF-HFTVQDGIDAIEDVIYHTETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEL 365

Query: 125 RLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYET 180
             G         + +       +   +   +        S   +   + +L K   
Sbjct: 366 FGGYLYFHKAPNKEELHRETCRKVKALHQYDCLRANKATSAWGLEARVPFLDKEFI 421


>gi|168238182|ref|ZP_02663240.1| gmp synthase (glutamineamidotransferase) [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|194735323|ref|YP_002115573.1| GMP synthase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|226739723|sp|B4TR83|GUAA_SALSV RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|194710825|gb|ACF90046.1| gmp synthase (glutamine-hydrolyzing) [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197288913|gb|EDY28286.1| gmp synthase (glutamineamidotransferase) [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
          Length = 525

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 47/183 (25%), Gaps = 17/183 (9%)

Query: 9   PSALLLFSGGQDSSTCLSWA-LDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKW 67
              +L  SGG DSS             +  +  D G    + L     V     +     
Sbjct: 228 DKVILGLSGGVDSSVTAMLLHCAIGKNLTCVFVDNG---LLRLNEAEQVMDMFGDHFGLN 284

Query: 68  KDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLG 127
              +  +     A+ G+    +  K +     +                           
Sbjct: 285 IVHVPAEERFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGT-------- 336

Query: 128 ITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDI 187
                I     + +     +   I++      L  E  + +  PL  L K E  K+  ++
Sbjct: 337 -----IYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLEL 391

Query: 188 GGQ 190
           G  
Sbjct: 392 GLP 394


>gi|222481023|ref|YP_002567260.1| argininosuccinate synthase [Halorubrum lacusprofundi ATCC 49239]
 gi|222453925|gb|ACM58190.1| argininosuccinate synthase [Halorubrum lacusprofundi ATCC 49239]
          Length = 412

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 3/60 (5%)

Query: 13 LLFSGGQDSSTCLSWALDR--FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDS 70
          L FSGG D++ C+    +   +D V  ++ D GQ  + E +        +   +      
Sbjct: 6  LAFSGGLDTTVCVPLLKEEYGYDEVIGVNVDVGQPTE-EFDEAEETADALGLDLHVVDAK 64


>gi|333028470|ref|ZP_08456534.1| putative argininosuccinate synthase [Streptomyces sp. Tu6071]
 gi|332748322|gb|EGJ78763.1| putative argininosuccinate synthase [Streptomyces sp. Tu6071]
          Length = 488

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 26/57 (45%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  ++W  D+     T + D GQ ++ ++       K     + +  D
Sbjct: 16 IAFSGGLDTSVAVAWMRDKGAVPCTYTADIGQYDEPDIASVPGRAKTYGAEVARLVD 72


>gi|297624808|ref|YP_003706242.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Truepera radiovictrix DSM 17093]
 gi|297165988|gb|ADI15699.1| tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
           [Truepera radiovictrix DSM 17093]
          Length = 372

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 46/191 (24%), Gaps = 15/191 (7%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVET--LSF--DYGQRNKVELECRLCVRKKIVE 62
                L   SGG DSS   +   +    V+   L F  D   +   +L C          
Sbjct: 17  PKGRVLCAMSGGVDSSLAAALLKEAGYAVQGAMLRFWPDDRPKGAFDLCCSPDAAFDARR 76

Query: 63  LMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATL 122
           +               L    +     +        +    PN  V     I        
Sbjct: 77  VADAIDVP------FYLLDAREQFDEVVISPFVPTYEAGRTPNPCVWCNREIKFGTFLKK 130

Query: 123 AYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM-----WLKK 177
           A RLG   I  G       G                   + +      P +      L K
Sbjct: 131 ARRLGCDYIATGHYVRRVDGPGGVELHRGEDDTKDQTYFLWALERSILPHLLFPLGALSK 190

Query: 178 YETWKLAQDIG 188
            +  +LA+  G
Sbjct: 191 TQVRELAEARG 201


>gi|296393962|ref|YP_003658846.1| argininosuccinate synthase [Segniliparus rotundus DSM 44985]
 gi|296181109|gb|ADG98015.1| argininosuccinate synthase [Segniliparus rotundus DSM 44985]
          Length = 419

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 15/39 (38%), Gaps = 1/39 (2%)

Query: 7  KAPSALLLFSGGQD-SSTCLSWALDRFDRVETLSFDYGQ 44
               +L +SGG D S        +    V  ++ D GQ
Sbjct: 1  MTDRVILAYSGGLDTSVAISWIGQETGFEVVAVAVDVGQ 39


>gi|289451214|gb|ADC94128.1| PP-loop superfamily protein [Leptospira interrogans serovar
           Hebdomadis]
          Length = 380

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 54/216 (25%), Gaps = 20/216 (9%)

Query: 1   MNDIIKKAPS-----ALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRL 54
           M + IK A        +L  SGG DSS     A  +   R      D G  ++  +    
Sbjct: 57  MIEKIKLAGKDKDYDCILGISGGVDSSYLAYLAKKKFGLRPLLFHVDAGWNSQEAVNNIE 116

Query: 55  CVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNII 114
            +   +   +     +  E   L L+                 +   +L N       + 
Sbjct: 117 KIVDGLKLDLITEVVNWEEMKDLQLSFFKA--GVPHLDTPQDHVFFASLYNYCAKHGFLY 174

Query: 115 FLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHT---- 170
            L         +                    R    R ++T    G+  +   +     
Sbjct: 175 ILNGGNYSTECIREPLEWHYHASDLRQLKDIHRRFGTRKLKTFPLTGIFKYKVYYGIFKR 234

Query: 171 -------PLMWLKKYETWKLAQ-DIGGQDLVNLILE 198
                    +   K E  +  +   G Q   +   E
Sbjct: 235 LKVVQPLNYIPYTKEEAIRELETKFGWQRYSHKHYE 270


>gi|302517855|ref|ZP_07270197.1| argininosuccinate synthase [Streptomyces sp. SPB78]
 gi|318059859|ref|ZP_07978582.1| argininosuccinate synthase [Streptomyces sp. SA3_actG]
 gi|318076738|ref|ZP_07984070.1| argininosuccinate synthase [Streptomyces sp. SA3_actF]
 gi|302426750|gb|EFK98565.1| argininosuccinate synthase [Streptomyces sp. SPB78]
          Length = 488

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 26/57 (45%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  ++W  D+     T + D GQ ++ ++       K     + +  D
Sbjct: 16 IAFSGGLDTSVAVAWMRDKGAVPCTYTADIGQYDEPDIASVPGRAKTYGAEVARLVD 72


>gi|256829971|ref|YP_003158699.1| hypothetical protein Dbac_2201 [Desulfomicrobium baculatum DSM
           4028]
 gi|256579147|gb|ACU90283.1| conserved hypothetical protein [Desulfomicrobium baculatum DSM
           4028]
          Length = 264

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 69/224 (30%), Gaps = 17/224 (7%)

Query: 5   IKKAPSALLLFSGGQDSST-CLSWALDRFDRVETLSFDYGQRNK--VELECRLCVRKKIV 61
           + +     +L++GG DS+   L   +     V+T       R     E +    +++ + 
Sbjct: 1   MSEVKK--VLWTGGWDSTFRVLYLVVVEKCPVQTFYIIDPFRWSLVHEFKAMSNIKRTLK 58

Query: 62  ELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAAT 121
           +  P+    L          +G+  H S+  +   +              +   L     
Sbjct: 59  QKYPELSALLLPTLYFDKTDVGENLHLSVCYDGLKERLG-GQYEWLSIWADQFGLSEIEL 117

Query: 122 LAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETW 181
           +  R   + +       +Y    +  +  I A      +    H         + K +  
Sbjct: 118 VIERSD-SVVGCRSVIANYLSEDEKGYRGIDAKFKGTPVYDLFHYFAFAIT-DIYKVDMR 175

Query: 182 KLAQDIGGQDLVNLILEESHTCYLGKRDKRYEWGYGCNSCPACY 225
           ++A +    D++NL    S  C+         +   C +C  C 
Sbjct: 176 RIAAEHDFADILNL----SWFCHRP-----TFFSKPCGTCNPCK 210


>gi|217966619|ref|YP_002352125.1| NAD+ synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217335718|gb|ACK41511.1| NAD+ synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 526

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 37/135 (27%), Gaps = 4/135 (2%)

Query: 2   NDIIKKA--PSALLLFSGGQDSSTCLSWALDR-FDR-VETLSFDYGQRNKVELECRLCVR 57
            D IKK+    A++  SGG DS+     A +   +  V  +S      ++  +E    + 
Sbjct: 263 RDFIKKSGFQKAVIGLSGGIDSALVACIAREALGEENVLGVSLPSIYTSRESIEDAEKLS 322

Query: 58  KKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLV 117
           K +         S      L            + +         NL          I L 
Sbjct: 323 KNLGIEFRIIPISDIFYSYLKELNPSGNPIMDVAEENLQSRIRGNLLMFISNREEYILLA 382

Query: 118 FAATLAYRLGITNIV 132
                    G   + 
Sbjct: 383 TGNRSEALTGYCTLY 397


>gi|295840165|ref|ZP_06827098.1| argininosuccinate synthase [Streptomyces sp. SPB74]
 gi|197698096|gb|EDY45029.1| argininosuccinate synthase [Streptomyces sp. SPB74]
          Length = 486

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 26/57 (45%)

Query: 13 LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
          + FSGG D+S  ++W  D+     T + D GQ ++ ++       K     + +  D
Sbjct: 16 IAFSGGLDTSVAVAWMRDKGAVPCTYTADIGQYDEPDIASVPGRAKTYGAEVARLVD 72


>gi|13508161|ref|NP_110110.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycoplasma pneumoniae M129]
 gi|2496370|sp|P75365|MNMA_MYCPN RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|1674103|gb|AAB96067.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycoplasma pneumoniae M129]
 gi|301633672|gb|ADK87226.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Mycoplasma pneumoniae FH]
          Length = 370

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/192 (9%), Positives = 48/192 (25%), Gaps = 13/192 (6%)

Query: 7   KAPSALLLFSGGQDSSTCLSWALDRFDRVETLSFDY----------GQRNKVELE---CR 53
           +  +  +  SGG DS+        ++  V  +  +           G R   E +     
Sbjct: 2   QNKTVFVGISGGVDSAVSALLLKQQYREVIGIFMECWDNTLNNDQLGHRAFNEHKSGCSS 61

Query: 54  LCVRKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNI 113
               ++   +       L + +++          +       +    + L N  +    +
Sbjct: 62  KEDFREAQAIAQLLGIKLIKQNLVEPYWKQVFLPTIDAFKNGLTPNPDMLCNRLIKFGLM 121

Query: 114 IFLVFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLM 173
                           +      + +       +           ++       V  PL 
Sbjct: 122 RDYCKQLDPNSDFATGHYAALSWDNNQPLLAIPKDKHKDQTYFLAHVKPAQLQDVVFPLA 181

Query: 174 WLKKYETWKLAQ 185
            L K E  ++A 
Sbjct: 182 HLLKTEVRQIAL 193


>gi|89068296|ref|ZP_01155706.1| GMP synthase (glutamine-hydrolyzing) [Oceanicola granulosus
           HTCC2516]
 gi|89046213|gb|EAR52271.1| GMP synthase (glutamine-hydrolyzing) [Oceanicola granulosus
           HTCC2516]
          Length = 519

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 58/182 (31%), Gaps = 17/182 (9%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             +   SGG DSS       +   D++  +  D+G      L  +    + +      + 
Sbjct: 223 RVICGLSGGVDSSVAAVLIHEAIGDQLTCVFVDHG------LLRQNEAEEVVGMFRDAYN 276

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             L       L  LG++   S   +  +K +        V  R    +  A+ LA     
Sbjct: 277 IPLIHADEADL-FLGELEGVS---DPEVKRKTIGRLFIDVFQREANKIEGASFLAQGTLY 332

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
            +++  V  +             ++      L  +  + +  PL  L K E   L  ++G
Sbjct: 333 PDVIESVSFSGGPSVTI------KSHHNVGGLPEKMGLKLVEPLRELFKDEVRALGHELG 386

Query: 189 GQ 190
             
Sbjct: 387 LP 388


>gi|295397034|ref|ZP_06807148.1| GMP synthase [Aerococcus viridans ATCC 11563]
 gi|294974725|gb|EFG50438.1| GMP synthase [Aerococcus viridans ATCC 11563]
          Length = 528

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 55/185 (29%), Gaps = 20/185 (10%)

Query: 10  SALLLFSGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWK 68
             LL  SGG DSS           D++  +  D+G   K E      V + +        
Sbjct: 235 KVLLGLSGGVDSSVVGVLLQKAIGDQLTCIFVDHGLLRKNE---AEEVMETLGGKFGLNI 291

Query: 69  DSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGI 128
             +  +      + G                 +      + G   +++        +  +
Sbjct: 292 IKVDAEDRFLSKLAG---------------VSDPERKRKIIGNEFVYVFDDEAQKIK-DV 335

Query: 129 TNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIG 188
             +  G   TD          TI++      L  +   ++  PL  L K E   +  ++G
Sbjct: 336 DYLAQGTLYTDVIESGTDTAQTIKSHHNVGGLPEDMTFSLIEPLNTLFKDEVRAVGTELG 395

Query: 189 GQDLV 193
             D +
Sbjct: 396 MPDKI 400


>gi|157413852|ref|YP_001484718.1| tRNA-specific 2-thiouridylase MnmA [Prochlorococcus marinus str.
           MIT 9215]
 gi|205816917|sp|A8G6A1|MNMA_PROM2 RecName: Full=tRNA-specific 2-thiouridylase mnmA
 gi|157388427|gb|ABV51132.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           [Prochlorococcus marinus str. MIT 9215]
          Length = 385

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 54/192 (28%), Gaps = 21/192 (10%)

Query: 12  LLLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSL 71
           ++  SGG DSS   +  +++   VE L+        +      C  + +V+     +D  
Sbjct: 27  IVGLSGGVDSSLSAALLVEKGWNVEGLTL------WLMKGQGSCCSEGLVDAAGLCEDLG 80

Query: 72  GEDHILPLAIL---------------GDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
               I+    +               G         N  +K ++             I  
Sbjct: 81  INHKIIDSREIFEKEVIKKTTESYEKGLTPLPCSMCNKNVKFEEMLNYAINKKDFTHIAT 140

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLK 176
              A +     +  +                 +         +L  E    +  PL  +K
Sbjct: 141 GHYARIKKSSYVEKLDCKSFVFKEFLLLRGADENKDQSYFLYSLSQEVLSRLEFPLGEMK 200

Query: 177 KYETWKLAQDIG 188
           K ET K A  +G
Sbjct: 201 KEETRKEALRLG 212


>gi|170721856|ref|YP_001749544.1| asparagine synthase [Pseudomonas putida W619]
 gi|169759859|gb|ACA73175.1| asparagine synthase (glutamine-hydrolyzing) [Pseudomonas putida
           W619]
          Length = 611

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 14  LFSGGQDSSTCLSWALDR-----FDRVETLSFDY-GQRNKVELECRLCVRKKIVELMPKW 67
           L SGG DS+   + A  R       RV + S D+ GQ  + + +     R +   L    
Sbjct: 263 LLSGGLDSTILTAMAQQRLTAEQGGRVNSFSVDFIGQAEQFQSDTFRPERDEPYALAA-- 320

Query: 68  KDSLGEDHILPLAILGDI 85
            + +G  H   L   G++
Sbjct: 321 AEHIGSHHQTILIDNGEL 338


>gi|33867128|ref|NP_898686.1| putative PAPS reductase [Rhodococcus erythropolis]
 gi|33668962|gb|AAP73956.1| putative PAPS reductase [Rhodococcus erythropolis]
          Length = 283

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 41/193 (21%), Gaps = 12/193 (6%)

Query: 13  LLFSGGQDSSTCLSWALDRFDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKDSLG 72
           + FSGG+DS   L  AL     V  + FD G       E    V ++       +     
Sbjct: 41  VAFSGGKDSLVVLHLALSVEPNVPVVFFDSGAEFPETYEFVQRVAQEWKLNFQVYAA--- 97

Query: 73  EDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGITNIV 132
           E  +L +             +    +  +         R             R   +   
Sbjct: 98  EPPLLEMLSRDGGWQHERAADYPKSVSLHESLIAEPARRAHADHGPGEIWGVRADESVKG 157

Query: 133 IGVCETDYS---------GYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKL 183
                  +S             C     +       +       V  P     + + W  
Sbjct: 158 TARWSLYHSNLALEIERNCRTCCATKAEQRRAHGGLISRADGTRVIGPAWDWSRDDVWGY 217

Query: 184 AQDIGGQDLVNLI 196
                        
Sbjct: 218 LARHKLPANPIYD 230


>gi|15806874|ref|NP_295597.1| GMP synthase [Deinococcus radiodurans R1]
 gi|13627172|sp|Q9RT91|GUAA_DEIRA RecName: Full=GMP synthase [glutamine-hydrolyzing]; AltName:
           Full=GMP synthetase; AltName: Full=Glutamine
           amidotransferase
 gi|6459656|gb|AAF11428.1|AE002027_1 GMP synthase [Deinococcus radiodurans R1]
          Length = 506

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 50/185 (27%), Gaps = 22/185 (11%)

Query: 13  LLF--SGGQDSSTCLSWALDR-FDRVETLSFDYGQRNKVELECRLCVRKKIVELMPKWKD 69
           +L   SGG DSST          +R+  +  D+G     E E        +   +     
Sbjct: 214 VLLGISGGVDSSTLALLLAKAVGERLTAVFIDHGLLRLGEREQVEAALTPLGVNLVTVDA 273

Query: 70  SLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFLVFAATLAYRLGIT 129
                       LG ++  S         +           R              L   
Sbjct: 274 KD--------EFLGQLAGVSDP-------EQKRKIIGREFIRAFERETAKLGDFEFLAQG 318

Query: 130 NIVIGVCETDYSGYPDCRHDTIRAIETAINLGMESHVTVHTPLMWLKKYETWKLAQDIGG 189
            +   V E+            I++      L  +    +  P   L K E  ++A+ +G 
Sbjct: 319 TLYPDVIESAGG----EGAANIKSHHNVGGLPDDVQFKLVEPFRTLFKDEVREIARLLGL 374

Query: 190 QDLVN 194
            D + 
Sbjct: 375 PDHIR 379


>gi|332879718|ref|ZP_08447409.1| sulfate adenylyltransferase, small subunit [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332682345|gb|EGJ55251.1| sulfate adenylyltransferase, small subunit [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 299

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 52/181 (28%), Gaps = 12/181 (6%)

Query: 1   MNDIIKKAPSALLLFSGGQDSSTCLSWALDRFDRV----ETLSFDYGQRNKVELECRLCV 56
           M ++  +     LLFSGG+DS T +  A+  F  +      +  D G      L+ R  +
Sbjct: 17  MREVAAQFERPALLFSGGKDSITLVHLAIKAFAPMKIPFPLVHIDTGHNFPEALQYRDAL 76

Query: 57  RKKIVELMPKWKDSLGEDHILPLAILGDISHSSLTKNVAMKIQDNNLPNTFVPGRNIIFL 116
            K+I          L    +        ++           +Q + L +T         +
Sbjct: 77  AKRIGA-------ELIVRQVEDTIKAKGLTEPKGKFASRNWLQTHTLLDTIEEFHFDACI 129

Query: 117 VFAATLAYRLGITNIVIGVCETDYSGYPD-CRHDTIRAIETAINLGMESHVTVHTPLMWL 175
             A     +         V +      P   R +        I  G    V   +    L
Sbjct: 130 GGARRDEEKARAKERFFSVRDEFGQWDPKLQRPELWNIYNGRIQKGENVRVFPISNWTEL 189

Query: 176 K 176
            
Sbjct: 190 D 190


>gi|294791511|ref|ZP_06756668.1| argininosuccinate synthase [Scardovia inopinata F0304]
 gi|294457982|gb|EFG26336.1| argininosuccinate synthase [Scardovia inopinata F0304]
          Length = 432

 Score = 41.4 bits (95), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 1/52 (1%)

Query: 6  KKAPSALLLFSGGQDSSTCL-SWALDRFDRVETLSFDYGQRNKVELECRLCV 56
          +K    +L +SGG D+S  +          V  +S D GQ  +     R   
Sbjct: 27 RKGGRIVLAYSGGLDTSVAIPFLTERTGKEVVAVSVDVGQGGEDLETIRERA 78


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.313    0.114    0.355 

Lambda     K      H
   0.267   0.0348    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,504,848,472
Number of Sequences: 14124377
Number of extensions: 57048023
Number of successful extensions: 240158
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 9934
Number of HSP's successfully gapped in prelim test: 6106
Number of HSP's that attempted gapping in prelim test: 222096
Number of HSP's gapped (non-prelim): 16779
length of query: 240
length of database: 4,842,793,630
effective HSP length: 135
effective length of query: 105
effective length of database: 2,936,002,735
effective search space: 308280287175
effective search space used: 308280287175
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.9 bits)